Query psy7108
Match_columns 703
No_of_seqs 812 out of 4796
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 18:22:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7108.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7108hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1vyh_C Platelet-activating fac 100.0 5.2E-33 1.8E-37 302.6 33.0 250 28-318 132-409 (410)
2 3ow8_A WD repeat-containing pr 100.0 3.8E-33 1.3E-37 293.3 29.7 252 28-318 60-319 (321)
3 2ynn_A Coatomer subunit beta'; 100.0 7.5E-32 2.6E-36 281.0 33.6 250 28-314 37-298 (304)
4 1vyh_C Platelet-activating fac 100.0 5.4E-32 1.9E-36 294.5 30.5 242 41-321 102-370 (410)
5 2ynn_A Coatomer subunit beta'; 100.0 9.3E-32 3.2E-36 280.3 30.8 243 41-322 7-261 (304)
6 4gqb_B Methylosome protein 50; 100.0 2.1E-31 7E-36 282.7 29.5 241 44-321 79-332 (344)
7 3frx_A Guanine nucleotide-bind 100.0 3.2E-31 1.1E-35 278.3 29.7 243 35-320 55-317 (319)
8 3ow8_A WD repeat-containing pr 100.0 2.1E-31 7.1E-36 280.0 27.8 252 32-322 19-281 (321)
9 1got_B GT-beta; complex (GTP-b 100.0 1.4E-30 4.7E-35 276.0 34.3 248 28-317 79-340 (340)
10 1got_B GT-beta; complex (GTP-b 100.0 1.1E-30 3.7E-35 276.8 31.9 241 41-321 49-302 (340)
11 4g56_B MGC81050 protein; prote 100.0 6.7E-31 2.3E-35 280.5 24.3 248 42-327 89-350 (357)
12 2pbi_B Guanine nucleotide-bind 100.0 1.3E-29 4.3E-34 270.2 34.1 249 28-317 88-354 (354)
13 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.2E-30 2.4E-34 271.1 31.8 260 28-325 40-340 (345)
14 2pbi_B Guanine nucleotide-bind 100.0 6E-30 2E-34 272.7 30.2 242 41-321 58-316 (354)
15 2xzm_R RACK1; ribosome, transl 100.0 6.7E-30 2.3E-34 270.9 30.4 242 41-320 70-340 (343)
16 4gqb_B Methylosome protein 50; 100.0 3.9E-30 1.3E-34 272.9 28.1 222 28-284 105-334 (344)
17 3frx_A Guanine nucleotide-bind 100.0 7.7E-30 2.6E-34 267.7 29.7 240 41-320 11-267 (319)
18 4ery_A WD repeat-containing pr 100.0 2.1E-29 7.1E-34 263.0 32.6 252 28-319 47-311 (312)
19 1erj_A Transcriptional repress 100.0 2.1E-29 7.3E-34 272.4 33.8 258 28-320 87-389 (393)
20 4ery_A WD repeat-containing pr 100.0 2.1E-29 7.2E-34 262.9 32.5 243 41-322 17-270 (312)
21 2pm7_B Protein transport prote 100.0 7.3E-30 2.5E-34 265.0 28.3 240 41-319 3-284 (297)
22 2hes_X YDR267CP; beta-propelle 100.0 1.5E-29 5.2E-34 266.8 30.8 251 28-320 36-328 (330)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 7.9E-30 2.7E-34 270.7 28.4 247 36-320 6-283 (345)
24 3iz6_a 40S ribosomal protein R 100.0 5.5E-30 1.9E-34 275.7 26.9 267 34-321 55-376 (380)
25 1nr0_A Actin interacting prote 100.0 3.9E-29 1.3E-33 286.4 33.7 266 28-320 131-522 (611)
26 1nr0_A Actin interacting prote 100.0 2.2E-29 7.7E-34 288.4 30.3 251 28-321 41-356 (611)
27 3dm0_A Maltose-binding peripla 100.0 3.5E-29 1.2E-33 291.3 30.0 243 41-320 424-693 (694)
28 2xzm_R RACK1; ribosome, transl 100.0 1.4E-28 4.9E-33 260.7 30.1 242 41-320 15-285 (343)
29 2hes_X YDR267CP; beta-propelle 100.0 1.1E-28 3.7E-33 260.2 28.5 241 35-319 4-279 (330)
30 3bg1_A Protein SEC13 homolog; 100.0 2.1E-29 7.3E-34 263.9 21.7 243 41-319 7-292 (316)
31 2ymu_A WD-40 repeat protein; u 100.0 5E-28 1.7E-32 274.5 34.4 244 28-317 327-577 (577)
32 1erj_A Transcriptional repress 100.0 2.2E-28 7.6E-33 264.4 30.0 236 45-321 62-342 (393)
33 4g56_B MGC81050 protein; prote 100.0 1.1E-28 3.9E-33 263.1 24.9 207 42-283 134-345 (357)
34 1gxr_A ESG1, transducin-like e 100.0 1.8E-27 6.1E-32 249.6 33.0 233 45-318 95-335 (337)
35 2ymu_A WD-40 repeat protein; u 100.0 3.8E-27 1.3E-31 267.2 35.6 246 28-319 286-538 (577)
36 3jrp_A Fusion protein of prote 100.0 5.4E-28 1.8E-32 258.0 26.9 247 35-320 1-287 (379)
37 3zwl_B Eukaryotic translation 100.0 1.4E-27 4.8E-32 253.6 29.8 259 32-322 17-348 (369)
38 4aow_A Guanine nucleotide-bind 100.0 2.3E-27 8E-32 249.5 30.1 265 34-321 27-338 (340)
39 3dwl_C Actin-related protein 2 100.0 1.4E-28 4.8E-33 263.5 20.6 214 28-280 35-280 (377)
40 3iz6_a 40S ribosomal protein R 100.0 5.2E-28 1.8E-32 260.3 24.5 215 41-283 151-377 (380)
41 4aez_A CDC20, WD repeat-contai 100.0 2.5E-27 8.4E-32 256.8 29.9 259 28-327 115-387 (401)
42 3dm0_A Maltose-binding peripla 100.0 1.3E-27 4.4E-32 278.0 29.7 245 41-321 376-633 (694)
43 2aq5_A Coronin-1A; WD40 repeat 100.0 5.1E-27 1.7E-31 254.2 31.9 265 18-320 54-342 (402)
44 2pm7_B Protein transport prote 100.0 4.1E-27 1.4E-31 244.2 29.8 234 12-281 15-285 (297)
45 3f3f_A Nucleoporin SEH1; struc 100.0 2.1E-27 7.1E-32 249.4 27.7 250 41-321 5-338 (351)
46 1sq9_A Antiviral protein SKI8; 100.0 5.5E-28 1.9E-32 260.5 23.6 255 41-320 56-395 (397)
47 2pm9_A Protein WEB1, protein t 100.0 5E-28 1.7E-32 262.3 22.4 259 28-320 91-414 (416)
48 1k8k_C P40, ARP2/3 complex 41 100.0 3.7E-27 1.3E-31 251.2 28.5 257 28-323 32-364 (372)
49 3ei3_B DNA damage-binding prot 100.0 8.1E-27 2.8E-31 250.6 31.0 245 35-322 63-341 (383)
50 3vl1_A 26S proteasome regulato 100.0 3.7E-27 1.3E-31 256.1 28.6 259 28-321 80-366 (420)
51 3k26_A Polycomb protein EED; W 100.0 3.7E-28 1.3E-32 258.0 20.1 260 28-319 46-365 (366)
52 1r5m_A SIR4-interacting protei 100.0 4.2E-27 1.4E-31 255.0 28.3 253 46-319 107-424 (425)
53 1gxr_A ESG1, transducin-like e 100.0 1.4E-26 4.9E-31 242.7 30.3 239 42-321 46-297 (337)
54 3i2n_A WD repeat-containing pr 100.0 5.8E-27 2E-31 248.0 27.2 258 28-322 46-355 (357)
55 3vl1_A 26S proteasome regulato 100.0 1.1E-26 3.7E-31 252.5 29.6 273 28-320 121-419 (420)
56 1k8k_C P40, ARP2/3 complex 41 100.0 7.7E-27 2.6E-31 248.8 27.5 246 41-320 2-274 (372)
57 3dwl_C Actin-related protein 2 100.0 2E-28 6.7E-33 262.4 14.5 239 41-319 5-280 (377)
58 1r5m_A SIR4-interacting protei 100.0 1.7E-26 5.7E-31 250.3 29.6 245 44-321 42-362 (425)
59 3ei3_B DNA damage-binding prot 100.0 2.4E-26 8.3E-31 246.9 30.6 247 28-320 98-382 (383)
60 2j04_B YDR362CP, TAU91; beta p 100.0 1.5E-27 5.1E-32 266.5 21.4 244 15-298 177-455 (524)
61 4e54_B DNA damage-binding prot 100.0 2.1E-27 7.1E-32 260.4 20.9 210 41-283 113-329 (435)
62 3gre_A Serine/threonine-protei 100.0 6.8E-27 2.3E-31 255.9 24.5 266 30-322 47-361 (437)
63 2pm9_A Protein WEB1, protein t 100.0 6.5E-27 2.2E-31 253.5 24.0 252 44-321 64-338 (416)
64 3dw8_B Serine/threonine-protei 99.9 1.6E-26 5.4E-31 253.2 26.8 263 45-321 26-374 (447)
65 3mmy_A MRNA export factor; mRN 99.9 3.6E-26 1.2E-30 242.6 28.2 244 34-310 28-337 (368)
66 3v7d_B Cell division control p 99.9 3.1E-26 1.1E-30 252.7 28.2 270 28-324 144-425 (464)
67 3mkq_A Coatomer beta'-subunit; 99.9 3E-26 1E-30 270.9 29.3 242 41-321 7-260 (814)
68 3odt_A Protein DOA1; ubiquitin 99.9 1.8E-25 6.3E-30 231.8 31.7 247 28-323 41-299 (313)
69 3mkq_A Coatomer beta'-subunit; 99.9 6.7E-26 2.3E-30 267.9 32.1 248 28-312 37-296 (814)
70 4a11_B DNA excision repair pro 99.9 5.9E-26 2E-30 244.7 29.0 252 34-326 32-371 (408)
71 1sq9_A Antiviral protein SKI8; 99.9 2E-26 7E-31 248.1 23.8 251 41-321 10-323 (397)
72 3dw8_B Serine/threonine-protei 99.9 3.2E-26 1.1E-30 250.8 25.2 248 41-313 75-441 (447)
73 4gga_A P55CDC, cell division c 99.9 1.7E-25 5.7E-30 244.0 30.3 253 28-321 127-396 (420)
74 4aow_A Guanine nucleotide-bind 99.9 2E-25 6.8E-30 234.7 28.7 225 41-283 80-339 (340)
75 3zwl_B Eukaryotic translation 99.9 6.6E-25 2.3E-29 232.9 33.0 243 28-284 56-349 (369)
76 3bg1_A Protein SEC13 homolog; 99.9 2.9E-26 1E-30 240.1 22.0 221 28-281 37-293 (316)
77 4h5i_A Guanine nucleotide-exch 99.9 1.5E-25 5.2E-30 239.7 27.4 196 92-320 134-343 (365)
78 3jrp_A Fusion protein of prote 99.9 3E-25 1E-29 236.7 28.7 224 28-285 35-291 (379)
79 3k26_A Polycomb protein EED; W 99.9 7.1E-26 2.4E-30 240.3 22.9 243 42-322 13-320 (366)
80 3jro_A Fusion protein of prote 99.9 5.7E-26 1.9E-30 266.3 23.2 243 41-320 3-285 (753)
81 4h5i_A Guanine nucleotide-exch 99.9 1.9E-25 6.5E-30 238.9 25.3 206 45-282 131-344 (365)
82 1pgu_A Actin interacting prote 99.9 1.5E-24 5.1E-29 247.3 34.1 257 28-320 144-614 (615)
83 4gq1_A NUP37; propeller, trans 99.9 4.5E-26 1.6E-30 246.3 20.4 256 17-280 107-388 (393)
84 3f3f_A Nucleoporin SEH1; struc 99.9 1.2E-25 4E-30 236.0 23.0 239 28-287 35-343 (351)
85 3gre_A Serine/threonine-protei 99.9 1E-25 3.5E-30 246.5 22.7 205 45-285 109-363 (437)
86 3i2n_A WD repeat-containing pr 99.9 1.4E-25 4.9E-30 237.3 22.0 245 41-321 12-292 (357)
87 3sfz_A APAF-1, apoptotic pepti 99.9 1.2E-24 4.1E-29 269.5 33.4 259 28-320 639-913 (1249)
88 1yfq_A Cell cycle arrest prote 99.9 1.9E-25 6.4E-30 235.3 21.7 237 41-321 5-283 (342)
89 4aez_A CDC20, WD repeat-contai 99.9 2E-24 7E-29 233.8 30.3 221 28-287 158-386 (401)
90 3odt_A Protein DOA1; ubiquitin 99.9 1.6E-24 5.3E-29 224.8 27.7 236 36-321 9-256 (313)
91 2xyi_A Probable histone-bindin 99.9 6E-25 2.1E-29 240.4 24.6 242 41-321 122-411 (430)
92 4ggc_A P55CDC, cell division c 99.9 2.4E-24 8.3E-29 224.1 27.9 256 28-320 47-315 (318)
93 1p22_A F-BOX/WD-repeat protein 99.9 9E-25 3.1E-29 239.3 25.7 244 28-324 155-418 (435)
94 3v7d_B Cell division control p 99.9 2.2E-24 7.7E-29 237.8 28.4 243 41-321 115-382 (464)
95 2ovr_B FBW7, F-BOX/WD repeat p 99.9 3E-24 1E-28 235.7 29.2 231 41-320 193-442 (445)
96 2j04_B YDR362CP, TAU91; beta p 99.9 2.3E-25 7.9E-30 248.7 19.3 248 42-319 129-427 (524)
97 4a11_B DNA excision repair pro 99.9 1.2E-23 4E-28 226.7 31.5 216 45-288 97-372 (408)
98 2vdu_B TRNA (guanine-N(7)-)-me 99.9 5E-24 1.7E-28 234.4 28.9 225 45-307 100-373 (450)
99 1yfq_A Cell cycle arrest prote 99.9 1.7E-24 5.8E-29 227.9 24.0 238 28-311 35-315 (342)
100 3lrv_A PRE-mRNA-splicing facto 99.9 6.3E-25 2.2E-29 232.5 20.7 255 14-316 51-330 (343)
101 2xyi_A Probable histone-bindin 99.9 2.7E-24 9.4E-29 235.2 25.5 210 35-282 171-411 (430)
102 2w18_A PALB2, fancn, partner a 99.9 2E-24 6.8E-29 222.4 22.7 201 49-279 113-355 (356)
103 2ovr_B FBW7, F-BOX/WD repeat p 99.9 8E-24 2.7E-28 232.3 28.0 242 28-322 141-393 (445)
104 3sfz_A APAF-1, apoptotic pepti 99.9 7.6E-24 2.6E-28 262.3 30.0 242 41-321 609-872 (1249)
105 2aq5_A Coronin-1A; WD40 repeat 99.9 2.9E-24 1E-28 232.5 21.4 236 49-321 36-300 (402)
106 1l0q_A Surface layer protein; 99.9 7.2E-23 2.5E-27 220.1 31.8 258 15-321 6-276 (391)
107 3jro_A Fusion protein of prote 99.9 5.3E-24 1.8E-28 249.6 24.8 222 28-283 33-287 (753)
108 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-23 4.8E-28 229.5 25.9 197 45-280 83-296 (588)
109 1pgu_A Actin interacting prote 99.9 1E-23 3.5E-28 240.4 25.8 235 44-321 15-284 (615)
110 2oaj_A Protein SNI1; WD40 repe 99.9 1.8E-23 6.3E-28 248.9 28.9 210 43-285 13-246 (902)
111 4gq1_A NUP37; propeller, trans 99.9 5.1E-24 1.8E-28 230.1 21.9 239 46-314 88-385 (393)
112 3vu4_A KMHSV2; beta-propeller 99.9 1.3E-23 4.5E-28 223.7 24.6 269 34-320 8-336 (355)
113 4gga_A P55CDC, cell division c 99.9 6.1E-23 2.1E-27 223.6 29.7 234 12-284 153-398 (420)
114 3bws_A Protein LP49; two-domai 99.9 6.2E-23 2.1E-27 223.8 29.3 249 28-319 146-431 (433)
115 3lrv_A PRE-mRNA-splicing facto 99.9 4.2E-24 1.4E-28 226.2 19.3 225 54-320 43-292 (343)
116 2vdu_B TRNA (guanine-N(7)-)-me 99.9 2.1E-23 7.3E-28 229.4 25.1 237 47-318 4-337 (450)
117 4e54_B DNA damage-binding prot 99.9 4.4E-24 1.5E-28 233.8 18.4 257 28-322 144-432 (435)
118 2j04_A TAU60, YPL007P, hypothe 99.9 1.2E-23 4.2E-28 230.0 21.1 235 35-319 42-296 (588)
119 3mmy_A MRNA export factor; mRN 99.9 4.5E-23 1.5E-27 218.6 23.6 241 28-278 66-343 (368)
120 1p22_A F-BOX/WD-repeat protein 99.9 1.7E-22 5.9E-27 221.1 25.9 209 28-284 195-417 (435)
121 2oaj_A Protein SNI1; WD40 repe 99.9 6.3E-22 2.2E-26 235.7 27.8 216 45-289 486-791 (902)
122 4ggc_A P55CDC, cell division c 99.9 3.2E-21 1.1E-25 200.4 29.5 220 28-282 91-316 (318)
123 1l0q_A Surface layer protein; 99.9 1.4E-20 4.7E-25 202.3 29.3 221 28-288 56-282 (391)
124 2hqs_A Protein TOLB; TOLB, PAL 99.9 2E-20 6.9E-25 203.4 29.1 231 28-298 161-409 (415)
125 2w18_A PALB2, fancn, partner a 99.9 1.4E-20 4.9E-25 193.7 26.2 254 50-318 42-355 (356)
126 2hqs_A Protein TOLB; TOLB, PAL 99.9 1.2E-20 4E-25 205.3 22.2 256 22-319 94-386 (415)
127 2z3z_A Dipeptidyl aminopeptida 99.9 2.9E-22 9.8E-27 233.3 9.6 259 28-321 103-436 (706)
128 3vu4_A KMHSV2; beta-propeller 99.9 4E-20 1.4E-24 196.7 25.2 252 11-284 24-339 (355)
129 3bws_A Protein LP49; two-domai 99.8 2.5E-19 8.4E-24 195.2 28.8 218 28-281 193-432 (433)
130 1xfd_A DIP, dipeptidyl aminope 99.8 1.9E-21 6.4E-26 226.9 10.5 248 28-299 93-422 (723)
131 3o4h_A Acylamino-acid-releasin 99.8 2.7E-22 9.2E-27 228.1 0.9 232 28-307 46-300 (582)
132 3u4y_A Uncharacterized protein 99.8 1E-18 3.5E-23 183.0 26.0 255 28-321 22-305 (331)
133 2ojh_A Uncharacterized protein 99.8 5.9E-19 2E-23 180.4 19.8 235 18-298 19-283 (297)
134 1nir_A Nitrite reductase; hemo 99.8 1E-17 3.5E-22 188.1 27.9 263 28-322 161-460 (543)
135 1ri6_A Putative isomerase YBHE 99.8 9.6E-18 3.3E-22 175.9 24.3 268 12-319 6-307 (343)
136 3vgz_A Uncharacterized protein 99.8 8.5E-17 2.9E-21 169.6 30.7 235 28-298 71-325 (353)
137 2ecf_A Dipeptidyl peptidase IV 99.8 7E-18 2.4E-22 197.2 21.8 245 47-319 36-366 (741)
138 2ecf_A Dipeptidyl peptidase IV 99.8 7.2E-18 2.5E-22 197.1 19.8 233 49-298 110-391 (741)
139 3vgz_A Uncharacterized protein 99.8 2.2E-16 7.4E-21 166.5 27.6 246 46-321 39-304 (353)
140 3azo_A Aminopeptidase; POP fam 99.8 1.2E-19 4.1E-24 209.5 2.0 208 41-283 61-327 (662)
141 2oit_A Nucleoporin 214KDA; NH2 99.8 1.4E-17 4.9E-22 181.8 18.3 198 47-282 36-279 (434)
142 1xfd_A DIP, dipeptidyl aminope 99.7 2.1E-17 7E-22 192.6 19.5 261 22-298 38-371 (723)
143 1pby_B Quinohemoprotein amine 99.7 7.4E-17 2.5E-21 168.6 21.6 219 34-288 20-317 (337)
144 3u4y_A Uncharacterized protein 99.7 4.5E-16 1.5E-20 162.8 26.8 222 28-284 64-307 (331)
145 1nir_A Nitrite reductase; hemo 99.7 2.3E-16 7.8E-21 177.2 26.1 236 54-320 144-402 (543)
146 2xdw_A Prolyl endopeptidase; a 99.7 2.3E-18 8E-23 200.4 9.4 222 45-298 122-391 (710)
147 4a5s_A Dipeptidyl peptidase 4 99.7 1.9E-18 6.6E-23 202.1 7.9 241 29-299 95-428 (740)
148 2oit_A Nucleoporin 214KDA; NH2 99.7 1.2E-16 4.2E-21 174.4 21.6 212 45-280 90-332 (434)
149 3hfq_A Uncharacterized protein 99.7 7.4E-16 2.5E-20 162.6 26.1 220 41-284 79-322 (347)
150 1ri6_A Putative isomerase YBHE 99.7 6.4E-16 2.2E-20 161.8 25.4 213 41-283 78-312 (343)
151 3hfq_A Uncharacterized protein 99.7 7.1E-16 2.4E-20 162.7 25.4 258 34-319 27-316 (347)
152 2ojh_A Uncharacterized protein 99.7 2.8E-16 9.7E-21 160.3 20.6 213 28-273 64-293 (297)
153 2bkl_A Prolyl endopeptidase; m 99.7 6.4E-18 2.2E-22 196.2 7.0 201 45-280 118-348 (695)
154 1jmx_B Amine dehydrogenase; ox 99.7 7.9E-16 2.7E-20 161.7 22.2 230 52-321 4-326 (349)
155 1pby_B Quinohemoprotein amine 99.7 2E-15 6.9E-20 157.6 24.8 222 62-321 2-311 (337)
156 1jmx_B Amine dehydrogenase; ox 99.7 8.1E-16 2.8E-20 161.6 20.6 224 28-288 23-332 (349)
157 3o4h_A Acylamino-acid-releasin 99.7 6.5E-16 2.2E-20 175.4 19.2 228 47-318 21-274 (582)
158 1z68_A Fibroblast activation p 99.7 2E-16 6.7E-21 184.4 12.8 223 52-299 20-324 (719)
159 3pe7_A Oligogalacturonate lyas 99.7 5E-15 1.7E-19 158.5 22.5 232 33-299 18-302 (388)
160 1k32_A Tricorn protease; prote 99.7 6.8E-15 2.3E-19 178.6 25.7 225 30-283 363-639 (1045)
161 1k32_A Tricorn protease; prote 99.6 5.3E-15 1.8E-19 179.6 24.2 200 46-280 294-501 (1045)
162 1z68_A Fibroblast activation p 99.6 3.1E-16 1.1E-20 182.7 12.0 245 28-283 38-348 (719)
163 3scy_A Hypothetical bacterial 99.6 2.4E-14 8.4E-19 151.8 25.4 249 46-319 48-336 (361)
164 2z3z_A Dipeptidyl aminopeptida 99.6 1.9E-14 6.5E-19 167.1 24.5 206 50-283 183-437 (706)
165 4a5s_A Dipeptidyl peptidase 4 99.6 5.1E-15 1.8E-19 173.0 19.0 210 48-283 17-296 (740)
166 1yr2_A Prolyl oligopeptidase; 99.6 2.6E-16 8.9E-21 184.0 7.4 241 45-320 160-441 (741)
167 3pe7_A Oligogalacturonate lyas 99.6 5E-14 1.7E-18 150.7 21.7 239 28-299 62-363 (388)
168 1jof_A Carboxy-CIS,CIS-muconat 99.6 4.4E-14 1.5E-18 150.4 20.5 243 46-320 38-341 (365)
169 1jof_A Carboxy-CIS,CIS-muconat 99.6 7.6E-14 2.6E-18 148.6 20.8 231 28-282 62-342 (365)
170 3scy_A Hypothetical bacterial 99.6 7.4E-13 2.5E-17 140.3 26.7 211 43-284 95-342 (361)
171 2oiz_A Aromatic amine dehydrog 99.6 5.3E-13 1.8E-17 141.9 25.6 238 30-298 35-359 (361)
172 3iuj_A Prolyl endopeptidase; h 99.5 1.5E-15 5.1E-20 176.0 3.7 206 44-283 125-361 (693)
173 3fvz_A Peptidyl-glycine alpha- 99.5 9E-13 3.1E-17 138.1 24.0 250 47-319 23-321 (329)
174 3c5m_A Oligogalacturonate lyas 99.5 5.6E-14 1.9E-18 150.4 13.6 249 33-298 18-294 (396)
175 3azo_A Aminopeptidase; POP fam 99.5 1.1E-12 3.8E-17 151.0 21.6 214 41-284 118-372 (662)
176 1q7f_A NHL, brain tumor CG1071 99.5 1.5E-11 5.1E-16 125.6 27.8 234 44-319 26-279 (286)
177 3fvz_A Peptidyl-glycine alpha- 99.5 7.6E-12 2.6E-16 131.0 25.6 232 28-281 71-322 (329)
178 1q7f_A NHL, brain tumor CG1071 99.5 2.6E-11 8.9E-16 123.8 28.7 217 28-282 53-281 (286)
179 3c5m_A Oligogalacturonate lyas 99.5 9.7E-13 3.3E-17 140.7 18.4 220 29-284 63-332 (396)
180 2gop_A Trilobed protease; beta 99.5 6.5E-12 2.2E-16 132.0 23.6 205 48-296 59-311 (347)
181 3e5z_A Putative gluconolactona 99.4 1.4E-11 4.7E-16 126.7 24.0 239 34-314 16-282 (296)
182 2dg1_A DRP35, lactonase; beta 99.4 5.3E-11 1.8E-15 124.3 28.6 227 34-298 33-291 (333)
183 3e5z_A Putative gluconolactona 99.4 7E-11 2.4E-15 121.4 25.2 212 28-284 52-289 (296)
184 1rwi_B Serine/threonine-protei 99.4 5E-11 1.7E-15 120.3 22.1 233 49-321 25-265 (270)
185 3dsm_A Uncharacterized protein 99.3 1.1E-10 3.8E-15 122.1 23.4 218 28-289 66-309 (328)
186 3no2_A Uncharacterized protein 99.3 1.8E-10 6.3E-15 117.3 23.9 193 60-285 4-199 (276)
187 2dg1_A DRP35, lactonase; beta 99.3 1.3E-09 4.5E-14 113.7 28.9 212 28-272 68-300 (333)
188 1rwi_B Serine/threonine-protei 99.3 1.7E-10 5.9E-15 116.4 20.7 218 28-285 48-268 (270)
189 3no2_A Uncharacterized protein 99.3 5.6E-10 1.9E-14 113.7 24.5 205 28-270 17-231 (276)
190 3dsm_A Uncharacterized protein 99.3 9.1E-10 3.1E-14 115.1 26.4 240 48-319 44-301 (328)
191 2xdw_A Prolyl endopeptidase; a 99.3 2E-10 6.8E-15 133.4 22.8 239 9-283 127-416 (710)
192 1xip_A Nucleoporin NUP159; bet 99.2 1.8E-10 6.2E-15 122.0 17.2 172 49-269 39-231 (388)
193 2gop_A Trilobed protease; beta 99.2 7.8E-10 2.7E-14 116.0 21.4 197 30-280 89-330 (347)
194 1pjx_A Dfpase, DIISOPROPYLFLUO 99.2 3E-09 1E-13 109.6 24.1 237 45-319 15-298 (314)
195 1qks_A Cytochrome CD1 nitrite 99.2 3.7E-09 1.3E-13 118.5 26.2 201 60-287 166-379 (567)
196 1qks_A Cytochrome CD1 nitrite 99.2 2E-08 6.7E-13 112.6 30.7 225 28-281 179-421 (567)
197 3g4e_A Regucalcin; six bladed 99.2 1.4E-08 4.9E-13 104.2 27.4 219 45-298 10-253 (297)
198 2z2n_A Virginiamycin B lyase; 99.1 6.2E-08 2.1E-12 98.6 31.9 227 14-280 22-254 (299)
199 2z2n_A Virginiamycin B lyase; 99.1 2E-08 6.9E-13 102.3 28.0 230 43-314 10-250 (299)
200 2mad_H Methylamine dehydrogena 99.1 1.9E-08 6.4E-13 107.0 27.5 226 29-287 50-356 (373)
201 2xe4_A Oligopeptidase B; hydro 99.1 4.3E-11 1.5E-15 139.6 6.2 201 45-279 170-398 (751)
202 3hrp_A Uncharacterized protein 99.1 1.4E-08 4.7E-13 109.5 25.2 208 48-284 131-357 (409)
203 2bkl_A Prolyl endopeptidase; m 99.1 2.4E-09 8.1E-14 124.0 19.9 198 51-284 171-400 (695)
204 2oiz_A Aromatic amine dehydrog 99.1 1.4E-08 4.7E-13 107.6 23.9 215 28-264 83-360 (361)
205 1pjx_A Dfpase, DIISOPROPYLFLUO 99.1 2.9E-08 1E-12 102.1 24.9 215 28-282 48-300 (314)
206 3g4e_A Regucalcin; six bladed 99.0 7.3E-08 2.5E-12 98.9 26.6 203 28-270 37-260 (297)
207 1yr2_A Prolyl oligopeptidase; 99.0 7.4E-09 2.5E-13 120.7 20.8 234 11-284 167-444 (741)
208 3dr2_A Exported gluconolactona 99.0 1.8E-08 6E-13 104.0 21.3 225 41-298 38-288 (305)
209 2qc5_A Streptogramin B lactona 99.0 3.9E-07 1.3E-11 92.7 31.1 243 15-298 28-283 (300)
210 2ghs_A AGR_C_1268P; regucalcin 99.0 2.7E-07 9.2E-12 96.1 28.0 211 49-298 50-283 (326)
211 2mad_H Methylamine dehydrogena 99.0 1.5E-07 5E-12 100.0 25.6 248 55-324 28-354 (373)
212 3dr2_A Exported gluconolactona 99.0 6.7E-08 2.3E-12 99.6 22.4 207 28-278 69-303 (305)
213 3sjl_D Methylamine dehydrogena 98.9 4E-08 1.4E-12 103.6 20.5 252 29-321 62-364 (386)
214 2qc5_A Streptogramin B lactona 98.9 5.4E-07 1.8E-11 91.6 27.4 215 45-298 17-241 (300)
215 1xip_A Nucleoporin NUP159; bet 98.9 3.9E-08 1.3E-12 104.0 19.1 144 43-222 84-232 (388)
216 2ghs_A AGR_C_1268P; regucalcin 98.9 3.2E-07 1.1E-11 95.5 25.9 200 29-271 74-291 (326)
217 3c75_H MADH, methylamine dehyd 98.9 7.1E-08 2.4E-12 103.5 20.9 252 30-288 103-409 (426)
218 3hrp_A Uncharacterized protein 98.9 2.2E-07 7.4E-12 100.1 23.9 224 28-279 154-408 (409)
219 2qe8_A Uncharacterized protein 98.8 1E-07 3.4E-12 100.1 19.1 214 48-283 17-280 (343)
220 2hz6_A Endoplasmic reticulum t 98.8 1.1E-09 3.6E-14 116.6 3.1 185 60-285 8-196 (369)
221 1mda_H Methylamine dehydrogena 98.8 1.2E-07 4.3E-12 99.8 16.4 244 30-288 50-353 (368)
222 3c75_H MADH, methylamine dehyd 98.7 5.5E-07 1.9E-11 96.5 20.9 243 60-322 83-404 (426)
223 3iuj_A Prolyl endopeptidase; h 98.7 5.7E-07 2E-11 103.8 21.9 197 51-284 178-408 (693)
224 2iwa_A Glutamine cyclotransfer 98.7 2.6E-06 9E-11 85.0 23.5 196 49-281 22-237 (266)
225 3sjl_D Methylamine dehydrogena 98.7 2.2E-06 7.6E-11 90.3 22.5 237 28-289 111-371 (386)
226 1k8q_A Triacylglycerol lipase, 98.6 1.1E-09 3.9E-14 115.8 -3.9 172 451-673 20-191 (377)
227 2qe8_A Uncharacterized protein 98.6 2.1E-06 7.1E-11 90.0 21.0 220 45-273 64-312 (343)
228 2ece_A 462AA long hypothetical 98.6 4.2E-06 1.5E-10 88.9 22.2 195 50-270 140-399 (462)
229 3nol_A Glutamine cyclotransfer 98.6 4.8E-06 1.6E-10 82.2 20.5 194 41-272 35-245 (262)
230 3nok_A Glutaminyl cyclase; bet 98.5 6.6E-06 2.2E-10 81.2 20.1 185 49-271 56-254 (268)
231 2ece_A 462AA long hypothetical 98.5 6.1E-06 2.1E-10 87.6 20.6 197 60-280 94-351 (462)
232 2iwa_A Glutamine cyclotransfer 98.5 3.7E-05 1.3E-09 76.6 25.3 192 85-314 12-233 (266)
233 1npe_A Nidogen, entactin; glyc 98.5 4.4E-05 1.5E-09 76.5 25.8 202 48-288 36-245 (267)
234 1mda_H Methylamine dehydrogena 98.5 1.9E-06 6.4E-11 90.8 15.7 239 63-321 34-347 (368)
235 3mbr_X Glutamine cyclotransfer 98.5 2.5E-05 8.4E-10 76.4 22.0 187 48-271 21-223 (243)
236 3nol_A Glutamine cyclotransfer 98.4 2.1E-05 7.3E-10 77.5 20.7 193 84-316 33-254 (262)
237 2hz6_A Endoplasmic reticulum t 98.4 4.4E-08 1.5E-12 104.0 -0.6 174 28-248 21-200 (369)
238 1fwx_A Nitrous oxide reductase 98.3 6.9E-06 2.3E-10 90.3 15.0 185 48-271 134-407 (595)
239 1fwx_A Nitrous oxide reductase 98.3 2.9E-05 1E-09 85.3 19.2 186 60-281 100-361 (595)
240 3hxj_A Pyrrolo-quinoline quino 98.2 3.8E-05 1.3E-09 79.1 17.9 207 28-285 80-287 (330)
241 3hxj_A Pyrrolo-quinoline quino 98.2 4.3E-05 1.5E-09 78.7 17.9 205 28-281 119-324 (330)
242 1kb0_A Quinohemoprotein alcoho 98.2 4.3E-05 1.5E-09 87.6 19.5 207 70-289 189-515 (677)
243 3nok_A Glutaminyl cyclase; bet 98.2 0.00016 5.5E-09 71.3 20.4 191 84-314 45-262 (268)
244 1k8q_A Triacylglycerol lipase, 98.2 1.3E-07 4.3E-12 99.8 -2.4 105 414-586 82-186 (377)
245 3mbr_X Glutamine cyclotransfer 98.1 0.00029 9.8E-09 68.9 20.8 191 84-314 11-231 (243)
246 1kb0_A Quinohemoprotein alcoho 98.1 8.9E-05 3E-09 85.0 19.8 201 51-268 246-536 (677)
247 2p4o_A Hypothetical protein; p 98.1 0.00078 2.7E-08 68.9 25.0 205 48-284 32-244 (306)
248 1yiq_A Quinohemoprotein alcoho 98.1 0.00011 3.9E-09 84.3 20.4 199 51-266 238-532 (689)
249 3v65_B Low-density lipoprotein 98.1 0.00085 2.9E-08 71.2 25.5 221 28-286 98-323 (386)
250 2fp8_A Strictosidine synthase; 98.1 0.00054 1.8E-08 70.6 23.4 202 49-285 20-272 (322)
251 1yiq_A Quinohemoprotein alcoho 98.1 0.00012 4E-09 84.1 20.0 207 70-289 182-513 (689)
252 1npe_A Nidogen, entactin; glyc 98.1 0.00067 2.3E-08 67.7 23.3 189 62-283 2-200 (267)
253 3qqz_A Putative uncharacterize 98.0 0.0016 5.4E-08 64.4 24.2 216 43-280 22-252 (255)
254 3v64_C Agrin; beta propeller, 98.0 0.0013 4.5E-08 68.7 24.7 219 28-285 55-279 (349)
255 1ijq_A LDL receptor, low-densi 97.9 0.0061 2.1E-07 62.5 27.8 203 47-286 29-243 (316)
256 3p5b_L Low density lipoprotein 97.9 0.0046 1.6E-07 65.8 27.2 220 28-286 94-325 (400)
257 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.00076 2.6E-08 71.0 19.9 195 61-288 143-344 (376)
258 3q7m_A Lipoprotein YFGL, BAMB; 97.8 0.0011 3.9E-08 69.6 21.1 191 60-285 52-262 (376)
259 4a2l_A BT_4663, two-component 97.7 0.017 5.7E-07 67.4 29.5 202 47-283 356-573 (795)
260 2fp8_A Strictosidine synthase; 97.7 0.005 1.7E-07 63.2 22.4 198 49-281 81-313 (322)
261 4a2l_A BT_4663, two-component 97.6 0.017 5.7E-07 67.4 28.8 207 47-284 309-529 (795)
262 3sov_A LRP-6, low-density lipo 97.6 0.011 3.7E-07 60.7 23.5 201 48-285 35-242 (318)
263 2p4o_A Hypothetical protein; p 97.6 0.019 6.6E-07 58.3 24.9 211 28-273 55-279 (306)
264 3tc9_A Hypothetical hydrolase; 97.6 0.011 3.7E-07 63.6 23.9 134 28-184 161-301 (430)
265 2xe4_A Oligopeptidase B; hydro 97.6 0.00083 2.8E-08 78.0 16.1 156 93-281 175-354 (751)
266 3m0c_C LDL receptor, low-densi 97.5 0.033 1.1E-06 64.4 28.6 207 42-285 418-636 (791)
267 4hw6_A Hypothetical protein, I 97.5 0.013 4.6E-07 62.9 23.7 195 49-279 140-372 (433)
268 1kv9_A Type II quinohemoprotei 97.5 0.0042 1.4E-07 70.9 20.5 208 70-289 177-496 (668)
269 3v64_C Agrin; beta propeller, 97.5 0.023 7.8E-07 59.1 24.5 198 48-282 34-235 (349)
270 1ijq_A LDL receptor, low-densi 97.4 0.039 1.3E-06 56.4 24.9 184 63-281 3-195 (316)
271 1kv9_A Type II quinohemoprotei 97.4 0.0039 1.3E-07 71.1 17.9 207 61-286 66-338 (668)
272 4hw6_A Hypothetical protein, I 97.3 0.017 5.7E-07 62.1 21.8 222 28-280 164-432 (433)
273 2ad6_A Methanol dehydrogenase 97.3 0.014 4.6E-07 65.3 21.1 216 62-289 161-502 (571)
274 3v65_B Low-density lipoprotein 97.3 0.027 9.2E-07 59.5 22.3 195 51-282 80-278 (386)
275 2p9w_A MAL S 1 allergenic prot 97.3 0.048 1.6E-06 55.5 22.8 214 50-281 15-265 (334)
276 3p5b_L Low density lipoprotein 97.2 0.073 2.5E-06 56.4 25.2 187 62-282 84-278 (400)
277 3qqz_A Putative uncharacterize 97.2 0.058 2E-06 53.1 22.1 167 89-281 24-204 (255)
278 3tc9_A Hypothetical hydrolase; 97.2 0.0092 3.1E-07 64.1 17.7 151 93-280 138-300 (430)
279 3v9f_A Two-component system se 97.1 0.083 2.9E-06 61.3 26.2 201 47-283 312-526 (781)
280 1flg_A Protein (quinoprotein e 97.1 0.034 1.2E-06 62.2 21.6 180 97-289 251-524 (582)
281 1flg_A Protein (quinoprotein e 97.1 0.031 1.1E-06 62.4 20.8 198 51-266 249-543 (582)
282 1w6s_A Methanol dehydrogenase 97.0 0.03 1E-06 62.6 19.9 209 69-289 180-511 (599)
283 3v9f_A Two-component system se 97.0 0.14 4.8E-06 59.4 26.4 201 47-283 362-570 (781)
284 3amr_A 3-phytase; beta-propell 96.9 0.076 2.6E-06 54.5 20.6 196 61-288 40-271 (355)
285 2ad6_A Methanol dehydrogenase 96.9 0.041 1.4E-06 61.3 20.4 199 52-267 239-522 (571)
286 1n7d_A LDL receptor, low-densi 96.9 0.0014 4.8E-08 75.2 8.5 204 48-288 406-621 (699)
287 2xzh_A Clathrin heavy chain 1; 96.9 0.43 1.5E-05 48.2 25.9 110 54-185 73-190 (365)
288 3amr_A 3-phytase; beta-propell 96.9 0.044 1.5E-06 56.2 18.4 175 27-239 51-262 (355)
289 3s94_A LRP-6, low-density lipo 96.9 0.15 5E-06 57.4 24.6 203 46-285 38-247 (619)
290 1k3i_A Galactose oxidase precu 96.9 0.045 1.5E-06 62.2 20.7 116 52-187 190-326 (656)
291 1w6s_A Methanol dehydrogenase 96.8 0.037 1.3E-06 61.9 18.7 210 61-287 62-348 (599)
292 2p9w_A MAL S 1 allergenic prot 96.7 0.053 1.8E-06 55.1 17.1 169 93-281 14-215 (334)
293 4a0p_A LRP6, LRP-6, low-densit 96.7 0.56 1.9E-05 52.7 27.4 199 47-285 36-241 (628)
294 3sov_A LRP-6, low-density lipo 96.7 0.28 9.5E-06 50.1 22.7 165 48-248 79-246 (318)
295 3kya_A Putative phosphatase; s 96.7 0.39 1.3E-05 51.9 24.6 134 28-183 164-340 (496)
296 3sre_A PON1, serum paraoxonase 96.6 0.13 4.6E-06 53.2 20.0 187 49-273 51-288 (355)
297 3m0c_C LDL receptor, low-densi 96.3 0.46 1.6E-05 54.8 23.9 121 46-188 469-593 (791)
298 3kya_A Putative phosphatase; s 96.3 0.18 6.1E-06 54.6 19.1 157 93-280 140-340 (496)
299 1bpo_A Protein (clathrin); cla 96.3 1.2 4.3E-05 46.7 24.1 192 53-273 71-322 (494)
300 1k3i_A Galactose oxidase precu 96.2 0.083 2.8E-06 60.0 17.1 214 47-271 242-530 (656)
301 2xbg_A YCF48-like protein; pho 96.1 0.75 2.6E-05 46.9 22.1 193 46-278 120-319 (327)
302 4a0p_A LRP6, LRP-6, low-densit 96.1 1.9 6.3E-05 48.4 26.9 199 48-284 340-552 (628)
303 3icv_A Lipase B, CALB; circula 95.8 0.0033 1.1E-07 64.0 2.7 56 612-667 116-171 (316)
304 3s94_A LRP-6, low-density lipo 95.8 1.6 5.6E-05 48.8 24.7 198 48-282 349-552 (619)
305 4hvt_A Ritya.17583.B, post-pro 95.7 0.00085 2.9E-08 76.7 -2.7 59 525-586 536-596 (711)
306 3i1i_A Homoserine O-acetyltran 95.6 0.0022 7.4E-08 66.9 0.4 56 607-665 126-183 (377)
307 1n7d_A LDL receptor, low-densi 95.6 0.036 1.2E-06 63.4 10.2 178 71-281 386-571 (699)
308 3hju_A Monoglyceride lipase; a 95.5 0.0046 1.6E-07 63.6 2.4 57 611-670 116-172 (342)
309 3i1i_A Homoserine O-acetyltran 95.3 0.0024 8.2E-08 66.5 -0.7 42 528-569 129-171 (377)
310 2vpj_A Kelch-like protein 12; 95.3 0.29 1E-05 49.0 15.0 192 60-283 62-280 (301)
311 2ism_A Putative oxidoreductase 95.3 0.92 3.1E-05 46.8 19.1 113 90-222 29-153 (352)
312 2ism_A Putative oxidoreductase 95.1 2.9 0.0001 42.9 22.4 70 48-123 31-115 (352)
313 1tca_A Lipase; hydrolase(carbo 95.0 0.0095 3.3E-07 61.1 2.7 55 611-665 81-135 (317)
314 1gpl_A RP2 lipase; serine este 94.9 0.012 4E-07 63.3 3.2 56 610-668 127-184 (432)
315 3icv_A Lipase B, CALB; circula 94.8 0.0022 7.4E-08 65.3 -2.7 55 529-583 115-169 (316)
316 3a9g_A Putative uncharacterize 94.8 4.4 0.00015 41.7 25.1 71 47-123 28-115 (354)
317 1tca_A Lipase; hydrolase(carbo 94.7 0.0024 8.2E-08 65.6 -2.6 54 529-582 81-134 (317)
318 3s25_A Hypothetical 7-bladed b 94.6 2.3 8E-05 42.7 19.4 192 32-282 43-256 (302)
319 2fuk_A XC6422 protein; A/B hyd 94.5 0.0025 8.7E-08 60.9 -3.0 52 528-584 94-145 (220)
320 3sre_A PON1, serum paraoxonase 94.3 2.2 7.5E-05 44.0 18.7 167 93-281 51-252 (355)
321 3rm3_A MGLP, thermostable mono 94.3 0.017 5.8E-07 56.9 2.5 50 611-666 95-144 (270)
322 3trd_A Alpha/beta hydrolase; c 94.3 0.0034 1.2E-07 59.5 -2.6 51 528-583 88-138 (208)
323 3pbp_A Nucleoporin NUP82; beta 94.3 2.1 7.1E-05 44.9 18.1 143 60-220 31-196 (452)
324 3a9g_A Putative uncharacterize 94.2 1.7 6E-05 44.8 18.0 110 91-222 28-153 (354)
325 3ii7_A Kelch-like protein 7; p 94.2 0.55 1.9E-05 47.1 13.8 191 60-283 55-274 (306)
326 2xn4_A Kelch-like protein 2; s 94.2 0.61 2.1E-05 46.7 14.0 191 60-283 61-278 (302)
327 2vpj_A Kelch-like protein 12; 94.1 0.6 2.1E-05 46.7 13.9 192 60-283 14-233 (301)
328 3pfb_A Cinnamoyl esterase; alp 93.9 0.0045 1.5E-07 61.1 -2.7 54 528-584 102-155 (270)
329 2g8s_A Glucose/sorbosone dehyd 93.9 4.4 0.00015 41.6 20.2 71 48-122 18-107 (353)
330 3ii7_A Kelch-like protein 7; p 93.8 0.73 2.5E-05 46.2 13.7 191 61-283 12-227 (306)
331 2i3d_A AGR_C_3351P, hypothetic 93.7 0.0059 2E-07 59.9 -2.1 52 529-584 105-157 (249)
332 1cru_A Protein (soluble quinop 93.6 6.3 0.00022 42.1 21.5 117 91-223 26-163 (454)
333 2zyr_A Lipase, putative; fatty 93.6 0.032 1.1E-06 60.0 3.2 56 611-666 112-167 (484)
334 2x5x_A PHB depolymerase PHAZ7; 93.6 0.025 8.6E-07 58.4 2.3 54 611-665 112-165 (342)
335 3iii_A COCE/NOND family hydrol 93.6 0.01 3.6E-07 65.7 -0.7 53 528-583 143-196 (560)
336 3pbp_A Nucleoporin NUP82; beta 93.6 2.2 7.5E-05 44.8 16.7 155 11-181 25-209 (452)
337 3trd_A Alpha/beta hydrolase; c 93.3 0.03 1E-06 52.8 2.2 51 610-665 88-138 (208)
338 2qjw_A Uncharacterized protein 93.3 0.051 1.7E-06 49.5 3.7 51 612-667 59-109 (176)
339 2vat_A Acetyl-COA--deacetylcep 93.3 0.0099 3.4E-07 64.1 -1.5 46 535-583 189-235 (444)
340 4fbl_A LIPS lipolytic enzyme; 93.2 0.008 2.7E-07 60.3 -2.3 51 528-583 105-155 (281)
341 2b9v_A Alpha-amino acid ester 93.1 0.026 9E-07 63.9 1.6 53 528-583 138-192 (652)
342 1mpx_A Alpha-amino acid ester 93.1 0.011 3.8E-07 66.7 -1.5 54 528-584 125-180 (615)
343 3ds8_A LIN2722 protein; unkonw 93.0 0.024 8.3E-07 55.9 1.1 54 611-664 78-133 (254)
344 2wtm_A EST1E; hydrolase; 1.60A 92.9 0.033 1.1E-06 54.4 1.9 52 611-665 84-135 (251)
345 2qs9_A Retinoblastoma-binding 92.9 0.064 2.2E-06 49.9 3.8 51 611-666 50-101 (194)
346 2g8s_A Glucose/sorbosone dehyd 92.9 3.1 0.00011 42.8 17.0 115 92-222 18-148 (353)
347 3hju_A Monoglyceride lipase; a 92.8 0.014 4.9E-07 59.8 -1.1 53 528-583 115-167 (342)
348 3bdi_A Uncharacterized protein 92.8 0.014 4.7E-07 54.8 -1.2 48 532-582 87-134 (207)
349 3das_A Putative oxidoreductase 92.7 9.8 0.00034 38.9 21.3 117 88-222 28-158 (347)
350 3lp5_A Putative cell surface h 92.7 0.041 1.4E-06 54.1 2.1 54 611-664 82-137 (250)
351 3ksr_A Putative serine hydrola 92.7 0.018 6.2E-07 57.5 -0.5 40 528-567 82-123 (290)
352 4asc_A Kelch repeat and BTB do 92.6 1.5 5.3E-05 44.0 14.2 179 60-271 45-252 (315)
353 4e15_A Kynurenine formamidase; 92.6 0.017 5.8E-07 58.5 -0.8 60 526-585 130-196 (303)
354 2xbg_A YCF48-like protein; pho 92.5 9.8 0.00034 38.4 27.5 193 47-283 79-280 (327)
355 2woz_A Kelch repeat and BTB do 92.4 2.6 8.9E-05 42.4 15.6 152 60-242 56-233 (318)
356 3fle_A SE_1780 protein; struct 92.4 0.031 1.1E-06 55.0 0.8 52 612-663 82-135 (249)
357 3pe6_A Monoglyceride lipase; a 92.4 0.016 5.6E-07 57.6 -1.2 53 528-583 97-149 (303)
358 3dkr_A Esterase D; alpha beta 92.4 0.0093 3.2E-07 57.7 -3.0 51 528-583 78-128 (251)
359 3p2m_A Possible hydrolase; alp 92.4 0.055 1.9E-06 55.3 2.7 47 616-665 135-181 (330)
360 3h04_A Uncharacterized protein 92.4 0.053 1.8E-06 52.9 2.5 52 611-667 80-131 (275)
361 3pfb_A Cinnamoyl esterase; alp 92.4 0.045 1.6E-06 53.6 2.0 53 611-666 103-155 (270)
362 4asc_A Kelch repeat and BTB do 92.3 2.7 9.1E-05 42.2 15.5 189 63-283 7-223 (315)
363 3qit_A CURM TE, polyketide syn 92.2 0.03 1E-06 55.0 0.5 48 533-583 83-130 (286)
364 3k2i_A Acyl-coenzyme A thioest 92.2 0.017 6E-07 61.7 -1.4 52 528-583 206-259 (422)
365 1m33_A BIOH protein; alpha-bet 92.2 0.073 2.5E-06 52.0 3.3 52 610-665 58-109 (258)
366 3oos_A Alpha/beta hydrolase fa 92.2 0.024 8.3E-07 55.5 -0.3 46 536-584 82-127 (278)
367 2fuk_A XC6422 protein; A/B hyd 92.1 0.057 1.9E-06 51.2 2.3 53 610-667 94-146 (220)
368 3fnb_A Acylaminoacyl peptidase 92.1 0.022 7.6E-07 60.5 -0.7 51 528-584 213-263 (405)
369 3pe6_A Monoglyceride lipase; a 92.1 0.075 2.6E-06 52.6 3.3 54 611-667 98-151 (303)
370 2q0x_A Protein DUF1749, unchar 92.0 0.082 2.8E-06 54.5 3.5 53 611-666 92-146 (335)
371 3hlk_A Acyl-coenzyme A thioest 92.0 0.017 5.8E-07 62.4 -1.8 51 528-582 222-274 (446)
372 3ibt_A 1H-3-hydroxy-4-oxoquino 91.9 0.15 5.2E-06 49.5 5.2 45 618-665 78-123 (264)
373 3rm3_A MGLP, thermostable mono 91.9 0.0096 3.3E-07 58.7 -3.7 50 528-583 94-143 (270)
374 1zgk_A Kelch-like ECH-associat 91.8 0.87 3E-05 45.8 11.1 190 60-283 70-289 (308)
375 4f0j_A Probable hydrolytic enz 91.8 0.021 7.2E-07 57.3 -1.3 46 534-582 103-148 (315)
376 3fcy_A Xylan esterase 1; alpha 91.7 0.015 5.3E-07 60.0 -2.4 52 526-581 179-232 (346)
377 1cru_A Protein (soluble quinop 91.7 14 0.00048 39.3 20.9 107 47-172 26-162 (454)
378 3dqz_A Alpha-hydroxynitrIle ly 91.7 0.067 2.3E-06 51.8 2.3 34 545-581 73-106 (258)
379 2wtm_A EST1E; hydrolase; 1.60A 91.7 0.025 8.5E-07 55.3 -0.9 51 529-582 84-134 (251)
380 2cjp_A Epoxide hydrolase; HET: 91.7 0.067 2.3E-06 54.5 2.4 36 626-664 103-138 (328)
381 1zi8_A Carboxymethylenebutenol 91.6 0.016 5.6E-07 55.7 -2.2 43 525-567 94-137 (236)
382 1tl2_A L10, protein (tachylect 91.6 6.2 0.00021 37.5 15.5 137 60-221 3-152 (236)
383 2rau_A Putative esterase; NP_3 91.6 0.015 5.3E-07 60.1 -2.6 51 528-581 127-178 (354)
384 2xn4_A Kelch-like protein 2; s 91.6 1.7 5.7E-05 43.4 12.8 191 61-283 16-231 (302)
385 1xi4_A Clathrin heavy chain; a 91.5 18 0.00061 44.0 22.6 74 54-133 72-146 (1630)
386 2woz_A Kelch repeat and BTB do 91.4 3.3 0.00011 41.6 14.9 182 72-283 25-233 (318)
387 3s25_A Hypothetical 7-bladed b 91.4 13 0.00043 37.2 19.0 127 53-223 109-242 (302)
388 1isp_A Lipase; alpha/beta hydr 91.3 0.092 3.1E-06 48.2 2.7 53 614-667 56-108 (181)
389 3kda_A CFTR inhibitory factor 91.3 0.06 2.1E-06 53.6 1.6 45 618-665 87-132 (301)
390 2i3d_A AGR_C_3351P, hypothetic 91.3 0.11 3.6E-06 50.7 3.3 52 611-666 105-157 (249)
391 4g9e_A AHL-lactonase, alpha/be 91.2 0.028 9.6E-07 55.2 -1.0 74 415-568 44-117 (279)
392 1lns_A X-prolyl dipeptidyl ami 91.2 0.046 1.6E-06 63.1 0.6 53 528-583 307-375 (763)
393 3h04_A Uncharacterized protein 91.2 0.016 5.5E-07 56.7 -2.9 52 527-583 78-129 (275)
394 2hdw_A Hypothetical protein PA 91.1 0.016 5.6E-07 60.1 -3.0 86 415-581 116-203 (367)
395 1jfr_A Lipase; serine hydrolas 91.0 0.015 5.2E-07 57.3 -3.3 50 530-583 102-157 (262)
396 3llc_A Putative hydrolase; str 91.0 0.015 5E-07 57.0 -3.4 51 529-583 94-147 (270)
397 3nuz_A Putative acetyl xylan e 91.0 0.04 1.4E-06 58.4 -0.2 38 527-564 210-249 (398)
398 2qjw_A Uncharacterized protein 90.9 0.015 5.2E-07 53.1 -3.1 48 532-584 61-108 (176)
399 3i2k_A Cocaine esterase; alpha 90.9 0.051 1.7E-06 60.8 0.6 52 528-582 91-143 (587)
400 2h1i_A Carboxylesterase; struc 90.9 0.11 3.9E-06 49.3 3.0 53 612-667 102-156 (226)
401 3g8y_A SUSD/RAGB-associated es 90.8 0.037 1.3E-06 58.5 -0.7 49 528-580 206-256 (391)
402 2pbl_A Putative esterase/lipas 90.7 0.038 1.3E-06 54.3 -0.6 56 528-584 113-171 (262)
403 1vlq_A Acetyl xylan esterase; 90.7 0.023 8E-07 58.3 -2.3 106 410-581 109-224 (337)
404 3dkr_A Esterase D; alpha beta 90.6 0.081 2.8E-06 50.8 1.6 53 611-668 79-131 (251)
405 3ott_A Two-component system se 90.5 27 0.00094 39.7 26.5 201 47-283 62-262 (758)
406 2b61_A Homoserine O-acetyltran 90.5 0.026 9E-07 58.7 -2.1 48 532-582 140-188 (377)
407 1jfr_A Lipase; serine hydrolas 90.5 0.091 3.1E-06 51.6 1.9 52 611-666 101-158 (262)
408 3u1t_A DMMA haloalkane dehalog 90.4 0.048 1.7E-06 54.4 -0.2 37 543-582 94-130 (309)
409 3b12_A Fluoroacetate dehalogen 89.8 0.053 1.8E-06 53.9 0.0 38 543-583 94-131 (304)
410 1wm1_A Proline iminopeptidase; 90.2 0.073 2.5E-06 53.7 1.0 41 537-580 97-137 (317)
411 1zgk_A Kelch-like ECH-associat 90.2 1.8 6.1E-05 43.4 11.6 191 60-283 24-242 (308)
412 3oos_A Alpha/beta hydrolase fa 90.2 0.33 1.1E-05 47.1 5.9 49 615-666 79-127 (278)
413 1ex9_A Lactonizing lipase; alp 90.2 0.12 4E-06 51.9 2.5 49 613-664 60-108 (285)
414 1w52_X Pancreatic lipase relat 90.1 0.097 3.3E-06 56.4 1.9 52 611-665 128-181 (452)
415 3qit_A CURM TE, polyketide syn 90.0 0.25 8.6E-06 48.1 4.8 55 614-671 82-136 (286)
416 3bdi_A Uncharacterized protein 90.0 0.16 5.4E-06 47.3 3.1 50 613-665 86-135 (207)
417 3f67_A Putative dienelactone h 90.0 0.058 2E-06 51.8 0.0 80 415-569 51-139 (241)
418 2rau_A Putative esterase; NP_3 90.0 0.15 5.1E-06 52.4 3.2 59 603-665 121-180 (354)
419 3i28_A Epoxide hydrolase 2; ar 89.9 0.058 2E-06 59.2 -0.1 37 543-582 325-361 (555)
420 2r8b_A AGR_C_4453P, uncharacte 89.9 0.13 4.5E-06 49.9 2.6 54 611-667 125-178 (251)
421 3qvm_A OLEI00960; structural g 89.7 0.053 1.8E-06 53.1 -0.6 43 538-583 91-133 (282)
422 1zi8_A Carboxymethylenebutenol 89.7 0.13 4.3E-06 49.2 2.2 51 610-665 97-148 (236)
423 3g9x_A Haloalkane dehalogenase 89.6 0.061 2.1E-06 53.4 -0.2 66 424-568 56-121 (299)
424 1azw_A Proline iminopeptidase; 89.6 0.066 2.3E-06 54.0 0.1 40 538-580 95-134 (313)
425 1fj2_A Protein (acyl protein t 89.5 0.2 6.8E-06 47.6 3.5 52 611-666 96-149 (232)
426 1imj_A CIB, CCG1-interacting f 89.5 0.14 4.7E-06 48.0 2.2 43 537-582 95-137 (210)
427 2vat_A Acetyl-COA--deacetylcep 89.5 0.13 4.6E-06 55.0 2.4 50 615-667 187-237 (444)
428 2xmz_A Hydrolase, alpha/beta h 89.5 0.17 5.7E-06 49.7 2.9 43 621-666 77-119 (269)
429 3bdv_A Uncharacterized protein 89.4 0.18 6.2E-06 46.6 3.0 46 618-667 66-111 (191)
430 3bjr_A Putative carboxylestera 89.4 0.025 8.4E-07 56.5 -3.3 85 416-582 70-171 (283)
431 1wm1_A Proline iminopeptidase; 89.4 0.18 6.1E-06 50.8 3.1 46 616-664 94-139 (317)
432 1bu8_A Protein (pancreatic lip 89.4 0.13 4.5E-06 55.3 2.2 52 611-665 128-181 (452)
433 4ao6_A Esterase; hydrolase, th 89.3 0.021 7.3E-07 56.5 -3.8 43 526-568 129-171 (259)
434 3e0x_A Lipase-esterase related 89.3 0.056 1.9E-06 51.8 -0.7 36 546-585 85-121 (245)
435 1l7a_A Cephalosporin C deacety 89.3 0.062 2.1E-06 54.1 -0.4 77 419-568 105-196 (318)
436 2pl5_A Homoserine O-acetyltran 89.2 0.033 1.1E-06 57.6 -2.6 46 535-583 134-180 (366)
437 3kxp_A Alpha-(N-acetylaminomet 89.2 0.049 1.7E-06 54.9 -1.3 37 543-582 132-168 (314)
438 3hxk_A Sugar hydrolase; alpha- 89.1 0.087 3E-06 52.0 0.5 78 410-565 57-139 (276)
439 1a8q_A Bromoperoxidase A1; hal 89.1 0.14 4.8E-06 50.3 2.1 40 623-665 82-122 (274)
440 3r40_A Fluoroacetate dehalogen 89.0 0.083 2.8E-06 52.5 0.3 43 536-581 95-137 (306)
441 3vis_A Esterase; alpha/beta-hy 89.0 0.024 8.4E-07 57.5 -3.8 79 416-581 113-199 (306)
442 1ufo_A Hypothetical protein TT 89.0 0.037 1.3E-06 52.9 -2.3 40 527-567 88-127 (238)
443 4fbl_A LIPS lipolytic enzyme; 88.9 0.2 6.8E-06 49.9 3.1 52 611-667 106-157 (281)
444 1azw_A Proline iminopeptidase; 88.9 0.2 7E-06 50.2 3.1 45 617-664 92-136 (313)
445 3kxp_A Alpha-(N-acetylaminomet 88.8 0.33 1.1E-05 48.6 4.7 46 617-665 124-169 (314)
446 3hss_A Putative bromoperoxidas 88.8 0.066 2.3E-06 53.1 -0.6 37 543-582 108-144 (293)
447 1auo_A Carboxylesterase; hydro 88.8 0.25 8.5E-06 46.4 3.5 53 612-667 90-144 (218)
448 3sty_A Methylketone synthase 1 88.7 0.11 3.6E-06 50.7 0.8 81 410-568 23-104 (267)
449 2pbl_A Putative esterase/lipas 88.7 0.19 6.5E-06 49.1 2.7 56 611-667 114-172 (262)
450 2puj_A 2-hydroxy-6-OXO-6-pheny 88.6 0.22 7.5E-06 49.6 3.1 43 621-666 98-140 (286)
451 4dnp_A DAD2; alpha/beta hydrol 88.5 0.13 4.5E-06 49.8 1.4 42 538-582 83-124 (269)
452 1gpl_A RP2 lipase; serine este 88.5 0.011 3.9E-07 63.4 -6.9 56 526-584 125-182 (432)
453 2o2g_A Dienelactone hydrolase; 88.5 0.21 7.2E-06 47.0 2.8 53 611-666 96-150 (223)
454 1tht_A Thioesterase; 2.10A {Vi 88.5 0.23 7.9E-06 50.3 3.2 48 611-664 91-138 (305)
455 1tht_A Thioesterase; 2.10A {Vi 88.5 0.087 3E-06 53.5 0.0 37 528-565 90-126 (305)
456 1ys1_X Lipase; CIS peptide Leu 88.4 0.19 6.5E-06 51.3 2.5 49 613-664 65-113 (320)
457 1ei9_A Palmitoyl protein thioe 88.4 0.12 4.3E-06 51.6 1.1 47 615-663 67-114 (279)
458 4ezi_A Uncharacterized protein 88.3 0.022 7.6E-07 59.8 -4.7 27 544-570 160-186 (377)
459 3das_A Putative oxidoreductase 88.3 24 0.00083 35.9 26.2 79 41-122 25-116 (347)
460 1iup_A META-cleavage product h 88.3 0.23 8E-06 49.3 3.1 43 621-666 89-131 (282)
461 3dqz_A Alpha-hydroxynitrIle ly 88.1 0.53 1.8E-05 45.3 5.5 43 622-667 67-110 (258)
462 1vkh_A Putative serine hydrola 88.0 0.21 7.3E-06 49.1 2.6 55 611-665 98-166 (273)
463 1u2e_A 2-hydroxy-6-ketonona-2, 88.0 0.25 8.7E-06 49.0 3.1 46 618-666 98-143 (289)
464 1brt_A Bromoperoxidase A2; hal 87.9 0.081 2.8E-06 52.4 -0.6 80 410-568 34-113 (277)
465 1r3d_A Conserved hypothetical 87.9 0.18 6.3E-06 49.4 2.0 17 425-441 42-58 (264)
466 2qs9_A Retinoblastoma-binding 87.9 0.071 2.4E-06 49.6 -1.0 42 536-582 57-99 (194)
467 2cjp_A Epoxide hydrolase; HET: 87.9 0.1 3.6E-06 53.0 0.2 35 544-581 103-137 (328)
468 4f0j_A Probable hydrolytic enz 87.9 0.26 8.9E-06 49.0 3.1 49 614-665 101-149 (315)
469 1ufo_A Hypothetical protein TT 87.8 0.27 9.2E-06 46.7 3.1 51 611-665 90-140 (238)
470 2xua_A PCAD, 3-oxoadipate ENOL 87.8 0.33 1.1E-05 47.6 3.8 42 623-667 88-129 (266)
471 3l80_A Putative uncharacterize 87.8 0.11 3.8E-06 51.5 0.3 42 536-580 101-142 (292)
472 2pl5_A Homoserine O-acetyltran 87.8 0.24 8.2E-06 50.9 2.9 50 615-667 132-182 (366)
473 3ksr_A Putative serine hydrola 87.8 0.27 9.3E-06 48.7 3.2 53 611-668 83-137 (290)
474 4dnp_A DAD2; alpha/beta hydrol 87.6 0.31 1.1E-05 47.1 3.5 48 617-667 80-127 (269)
475 1vkh_A Putative serine hydrola 87.5 0.064 2.2E-06 53.1 -1.7 38 528-565 97-134 (273)
476 2ocg_A Valacyclovir hydrolase; 87.5 0.29 9.9E-06 47.4 3.2 49 614-666 82-130 (254)
477 1isp_A Lipase; alpha/beta hydr 87.5 0.046 1.6E-06 50.3 -2.6 49 535-584 59-107 (181)
478 3hss_A Putative bromoperoxidas 87.4 0.28 9.7E-06 48.4 3.1 48 617-667 100-147 (293)
479 2x5x_A PHB depolymerase PHAZ7; 87.4 0.028 9.4E-07 58.1 -4.6 54 528-582 111-164 (342)
480 3r40_A Fluoroacetate dehalogen 87.3 0.29 1E-05 48.4 3.1 47 616-665 93-139 (306)
481 3qvm_A OLEI00960; structural g 87.3 0.3 1E-05 47.6 3.1 49 617-668 88-136 (282)
482 1ex9_A Lactonizing lipase; alp 87.3 0.044 1.5E-06 55.1 -3.1 43 536-581 65-107 (285)
483 2ocg_A Valacyclovir hydrolase; 87.2 0.11 3.9E-06 50.4 -0.0 45 534-582 84-128 (254)
484 3og9_A Protein YAHD A copper i 87.2 0.25 8.7E-06 46.4 2.5 51 613-666 86-138 (209)
485 1m33_A BIOH protein; alpha-bet 87.2 0.17 5.9E-06 49.2 1.3 42 536-581 66-107 (258)
486 2yys_A Proline iminopeptidase- 87.2 0.31 1.1E-05 48.4 3.2 40 622-665 90-129 (286)
487 3u1t_A DMMA haloalkane dehalog 87.2 0.21 7.3E-06 49.5 2.0 49 616-667 85-133 (309)
488 2b61_A Homoserine O-acetyltran 87.2 0.24 8.3E-06 51.2 2.5 51 613-666 139-190 (377)
489 1tqh_A Carboxylesterase precur 87.1 0.41 1.4E-05 46.3 4.0 45 613-663 73-117 (247)
490 2wue_A 2-hydroxy-6-OXO-6-pheny 87.1 0.24 8.1E-06 49.5 2.3 43 621-666 100-142 (291)
491 1q0r_A RDMC, aclacinomycin met 87.1 0.31 1.1E-05 48.6 3.2 54 604-665 76-129 (298)
492 1tl2_A L10, protein (tachylect 87.0 1.9 6.4E-05 41.0 8.1 108 48-178 41-157 (236)
493 3r0v_A Alpha/beta hydrolase fo 87.0 0.16 5.5E-06 49.1 0.9 76 410-567 34-109 (262)
494 3fcy_A Xylan esterase 1; alpha 87.0 0.22 7.5E-06 51.1 2.0 51 611-665 182-234 (346)
495 3e0x_A Lipase-esterase related 87.0 0.41 1.4E-05 45.4 3.9 37 628-668 85-122 (245)
496 1hkh_A Gamma lactamase; hydrol 86.9 0.076 2.6E-06 52.5 -1.5 80 410-568 34-113 (279)
497 2zsh_A Probable gibberellin re 86.9 0.046 1.6E-06 56.6 -3.3 82 415-581 138-226 (351)
498 3l80_A Putative uncharacterize 86.9 0.26 8.9E-06 48.7 2.4 46 616-664 99-144 (292)
499 1a8s_A Chloroperoxidase F; hal 86.8 0.1 3.4E-06 51.4 -0.7 80 410-568 30-110 (273)
500 1a8q_A Bromoperoxidase A1; hal 86.8 0.11 3.9E-06 51.0 -0.3 37 543-581 84-120 (274)
No 1
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.2e-33 Score=302.62 Aligned_cols=250 Identities=17% Similarity=0.237 Sum_probs=225.0
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|| .++++. +++.+|.+.|++++|+| ++++|++|+.|++|++||+.+++....+..|...|.+++|+|+++.|
T Consensus 132 i~vwd~~~~~~~--~~l~~h~~~V~~v~~~~--~~~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l 207 (410)
T 1vyh_C 132 IKVWDYETGDFE--RTLKGHTDSVQDISFDH--SGKLLASCSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHI 207 (410)
T ss_dssp EEEEETTTCCCC--EEECCCSSCEEEEEECT--TSSEEEEEETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCcEE--EEEeccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEE
Confidence 67777 577888 89999999999999999 99999999999999999999887777777899999999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++|+.|++|++||++++..+..+.+|.. .|.+++|+|++++|++|+.|++|++||+++++
T Consensus 208 ~s~s~D~~i~~wd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~ 267 (410)
T 1vyh_C 208 VSASRDKTIKMWEVQTGYCVKTFTGHRE--------------------WVRMVRPNQDGTLIASCSNDQTVRVWVVATKE 267 (410)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEeCCCeEEEEECCCCcEEEEEeCCCc--------------------cEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999999999999999999999988765 89999999999999999999999999999998
Q ss_pred eEEEEEeccCCccccccccceeeeeccC--------------------CCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108 187 LLKKFTITQNKSLDGINDFINRRKMTEF--------------------GNVSLIETRETHEGGNVVLKLPGVKKGDMAAR 246 (703)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~spd--------------------g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~ 246 (703)
+...+..+. ..|.+++|+|+ |.++++++.++ .|++||+++++++..
T Consensus 268 ~~~~~~~h~--------~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~------~i~iwd~~~~~~~~~ 333 (410)
T 1vyh_C 268 CKAELREHR--------HVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDK------TIKMWDVSTGMCLMT 333 (410)
T ss_dssp EEEEECCCS--------SCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTS------EEEEEETTTTEEEEE
T ss_pred eeeEecCCC--------ceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCC------eEEEEECCCCceEEE
Confidence 888776544 48999999997 56777777653 899999999999999
Q ss_pred ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108 247 VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLKL 318 (703)
Q Consensus 247 ~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l 318 (703)
+.+|...|.+++|+|+|++|++++.|+ |++||+.++++... ...+++|+|++ .++++++.|+.+++ |++
T Consensus 334 ~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~--~~l~sgs~D~~i~v-W~~ 409 (410)
T 1vyh_C 334 LVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDFHKTA--PYVVTGSVDQTVKV-WEC 409 (410)
T ss_dssp EECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEECSSS--SCEEEEETTSEEEE-EC-
T ss_pred EECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEcCCC--CEEEEEeCCCcEEE-EeC
Confidence 999999999999999999999999999 99999988876443 34789999999 88999999999998 864
No 2
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=3.8e-33 Score=293.33 Aligned_cols=252 Identities=18% Similarity=0.276 Sum_probs=222.9
Q ss_pred ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|+.. ++......+.+|...|.+++|+| ++..+++++.|++|++||+.+++....+..+...+.+++|+|++++|
T Consensus 60 v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~--~~~~l~s~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spdg~~l 137 (321)
T 3ow8_A 60 VKVWKWRDERLDLQWSLEGHQLGVVSVDISH--TLPIAASSSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPDSQYL 137 (321)
T ss_dssp EEEEEEETTEEEEEEEECCCSSCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTTSSEE
T ss_pred EEEEECCCCCeeeeeeeccCCCCEEEEEECC--CCCEEEEEeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCCCCEE
Confidence 4556533 32211146899999999999999 99999999999999999999998777777888899999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++++.|+.|++||+++++....+..+.. .|.+++|+|++++|++|+.|+.|++||+++++
T Consensus 138 ~~g~~dg~v~i~~~~~~~~~~~~~~~~~--------------------~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~ 197 (321)
T 3ow8_A 138 ATGTHVGKVNIFGVESGKKEYSLDTRGK--------------------FILSIAYSPDGKYLASGAIDGIINIFDIATGK 197 (321)
T ss_dssp EEECTTSEEEEEETTTCSEEEEEECSSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTE
T ss_pred EEEcCCCcEEEEEcCCCceeEEecCCCc--------------------eEEEEEECCCCCEEEEEcCCCeEEEEECCCCc
Confidence 9999999999999999998888877654 79999999999999999999999999999999
Q ss_pred eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108 187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW 266 (703)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l 266 (703)
.+..+..+. ..|.+++|+|+++++++++.++ .|++||+++++....+.+|...|.+++|+|++++|
T Consensus 198 ~~~~~~~h~--------~~v~~l~~spd~~~l~s~s~dg------~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l 263 (321)
T 3ow8_A 198 LLHTLEGHA--------MPIRSLTFSPDSQLLVTASDDG------YIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHF 263 (321)
T ss_dssp EEEEECCCS--------SCCCEEEECTTSCEEEEECTTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEEEcccC--------CceeEEEEcCCCCEEEEEcCCC------eEEEEECCCcceeEEEcCCCCceEEEEECCCCCEE
Confidence 888876544 4899999999999999888764 89999999999998999999999999999999999
Q ss_pred EEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108 267 VAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKL 318 (703)
Q Consensus 267 ~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l 318 (703)
++++.|+ |++||+.++++...+ ..+++|+|++ ..+++++.|+.+++ |+.
T Consensus 264 ~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g--~~l~s~~~d~~i~v-wd~ 319 (321)
T 3ow8_A 264 VSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNG--SKIVSVGDDQEIHI-YDC 319 (321)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTCCEEE-EEC
T ss_pred EEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCC--CEEEEEeCCCeEEE-EeC
Confidence 9999999 999999998876544 4679999999 78999999999998 875
No 3
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=7.5e-32 Score=280.96 Aligned_cols=250 Identities=14% Similarity=0.098 Sum_probs=214.4
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|| .+++++ +.+.+|..+|.+++|+| ++++|++|+.|++|++||+.+++....+..|.+.|.+++|+|++++|
T Consensus 37 v~lWd~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 112 (304)
T 2ynn_A 37 VELWNYETQVEV--RSIQVTETPVRAGKFIA--RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV 112 (304)
T ss_dssp EEEEETTTTEEE--EEEECCSSCEEEEEEEG--GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCcee--EEeeccCCcEEEEEEeC--CCCEEEEECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCCCCEE
Confidence 66677 467777 88999999999999999 99999999999999999999998888888999999999999999999
Q ss_pred EEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCC
Q psy7108 107 VVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSRE 184 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~ 184 (703)
++|+.|++|++||++++ .....+.+|.. .|.+++|+| ++..|++|+.|++|++||+++
T Consensus 113 ~sgs~D~~v~lWd~~~~~~~~~~~~~h~~--------------------~v~~v~~~p~~~~~l~sgs~D~~v~iwd~~~ 172 (304)
T 2ynn_A 113 LSGSDDLTVKLWNWENNWALEQTFEGHEH--------------------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (304)
T ss_dssp EEEETTSCEEEEEGGGTTEEEEEECCCCS--------------------CEEEEEECTTCTTEEEEEETTSEEEEEETTC
T ss_pred EEECCCCeEEEEECCCCcchhhhhcccCC--------------------cEEEEEECCCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999999887 44556666654 899999999 678999999999999999988
Q ss_pred CceEEEEEeccCCccccccccceeeeecc--CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTE--FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd 262 (703)
+.....+... +...+..+.++| +++++++++.++ .|++||+++++++..+.+|...|.+++|+|+
T Consensus 173 ~~~~~~~~~~-------~~~~v~~~~~~~~~~~~~l~s~s~D~------~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~ 239 (304)
T 2ynn_A 173 STPNFTLTTG-------QERGVNYVDYYPLPDKPYMITASDDL------TIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (304)
T ss_dssp SSCSEEEECC-------CTTCEEEEEECCSTTCCEEEEEETTS------EEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CCccceeccC-------CcCcEEEEEEEEcCCCCEEEEEcCCC------eEEEEeCCCCccceeeCCCCCCEEEEEECCC
Confidence 7766555422 234677788876 677888877664 8999999999999999999999999999999
Q ss_pred CCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEE
Q psy7108 263 GQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMM 314 (703)
Q Consensus 263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~l 314 (703)
+++|++++.|| |++||..+++....+. .+++++|++...++++|..++.+.+
T Consensus 240 ~~~l~s~s~Dg~i~iWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~asg~~~g~~~~ 298 (304)
T 2ynn_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFTVL 298 (304)
T ss_dssp SSEEEEEETTSCEEEEETTTCCEEEEECCSSSSEEEEEECTTCGGGCEEEEETTEEEEE
T ss_pred CCEEEEEcCCCeEEEEECCCCceeeeccCCCccEEEEEECCCCCceEEEEecCCceEEE
Confidence 99999999999 9999999988765543 5688899885556888877776554
No 4
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=100.00 E-value=5.4e-32 Score=294.54 Aligned_cols=242 Identities=18% Similarity=0.315 Sum_probs=221.0
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
..+.+|.++|++++|+| ++.+|++|+.||+|++||+.+++....+..|.+.|.+++|+|++++|++|+.|++|++||+
T Consensus 102 ~~l~gh~~~V~~~~~~p--~~~~l~s~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~ 179 (410)
T 1vyh_C 102 YALSGHRSPVTRVIFHP--VFSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDF 179 (410)
T ss_dssp CEEECCSSCEEEEEECS--SSSEEEEEESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEET
T ss_pred EeecccCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeC
Confidence 67889999999999999 9999999999999999999998877888889999999999999999999999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
.+++.+..+.+|.. .|.+++|+|++++|++|+.|++|++||++++.++.++..|.
T Consensus 180 ~~~~~~~~~~~h~~--------------------~V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~----- 234 (410)
T 1vyh_C 180 QGFECIRTMHGHDH--------------------NVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHR----- 234 (410)
T ss_dssp TSSCEEECCCCCSS--------------------CEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCS-----
T ss_pred CCCceeEEEcCCCC--------------------CEEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCC-----
Confidence 99998888877765 89999999999999999999999999999999998887554
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC------------------
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT------------------ 262 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd------------------ 262 (703)
..+.++.++|+|..+++++.++ .|++||+.++++...+.+|...|.+++|+|+
T Consensus 235 ---~~v~~~~~~~~g~~l~s~s~D~------~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~ 305 (410)
T 1vyh_C 235 ---EWVRMVRPNQDGTLIASCSNDQ------TVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSG 305 (410)
T ss_dssp ---SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-----
T ss_pred ---ccEEEEEECCCCCEEEEEcCCC------eEEEEECCCCceeeEecCCCceEEEEEEcCcccccchhhhccccccccC
Confidence 4899999999999999888764 8999999999999899999999999999996
Q ss_pred --CCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 263 --GQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 263 --g~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
|.+|++|+.|+ |++||+.++.++..+ ..+++|+|++ .++++++.|+.+++ |++...
T Consensus 306 ~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~h~~~v~~v~~~~~g--~~l~s~s~D~~i~v-wd~~~~ 370 (410)
T 1vyh_C 306 KPGPFLLSGSRDKTIKMWDVSTGMCLMTLVGHDNWVRGVLFHSGG--KFILSCADDKTLRV-WDYKNK 370 (410)
T ss_dssp --CCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSS--SCEEEEETTTEEEE-ECCTTS
T ss_pred CCCCEEEEEeCCCeEEEEECCCCceEEEEECCCCcEEEEEEcCCC--CEEEEEeCCCeEEE-EECCCC
Confidence 67899999999 999999998875444 4679999999 88999999999999 988654
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=100.00 E-value=9.3e-32 Score=280.29 Aligned_cols=243 Identities=12% Similarity=0.147 Sum_probs=212.8
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+++.+|.+.|++++|+| ++++|++|+.||+|++||+.++.....+..|...|.+++|+|++++|++|+.|++|++||+
T Consensus 7 ~~~~~h~~~V~~~~fsp--~~~~l~s~~~dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~~i~vwd~ 84 (304)
T 2ynn_A 7 KTFSNRSDRVKGIDFHP--TEPWVLTTLYSGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (304)
T ss_dssp EEEEEECSCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred EeecCCCCceEEEEECC--CCCEEEEEcCCCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCCEEEEEEC
Confidence 78999999999999999 9999999999999999999998877888889999999999999999999999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-EEEEEeccCCcc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-LKKFTITQNKSL 199 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~~~~~~ 199 (703)
++++.+..+.+|.. .|.+++|+|++++|++|+.|++|++||++++.. ...+..
T Consensus 85 ~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~------ 138 (304)
T 2ynn_A 85 NTGEKVVDFEAHPD--------------------YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEG------ 138 (304)
T ss_dssp TTCCEEEEEECCSS--------------------CEEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECC------
T ss_pred CCCcEEEEEeCCCC--------------------cEEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcc------
Confidence 99999999988865 899999999999999999999999999998744 444443
Q ss_pred ccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcC--CCCEEEEEeCCC-E
Q psy7108 200 DGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSP--TGQAWVAATTEG-V 274 (703)
Q Consensus 200 ~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~sp--dg~~l~s~s~Dg-v 274 (703)
|...|.+++|+| ++..+++++.++ .|++||++++.....+. .|...+..++|+| ++++|++++.|+ |
T Consensus 139 --h~~~v~~v~~~p~~~~~l~sgs~D~------~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i 210 (304)
T 2ynn_A 139 --HEHFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (304)
T ss_dssp --CCSCEEEEEECTTCTTEEEEEETTS------EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEE
T ss_pred --cCCcEEEEEECCCCCCEEEEEeCCC------eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeE
Confidence 445899999999 567777777664 89999998877665554 4667899999987 778999999999 9
Q ss_pred EEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108 275 HIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 275 ~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~ 322 (703)
++||+.++++...+ ...++|+|++ ..+++++.|+.+++ |++....
T Consensus 211 ~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~--~~l~s~s~Dg~i~i-Wd~~~~~ 261 (304)
T 2ynn_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKI-WNSSTYK 261 (304)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEE-EETTTCC
T ss_pred EEEeCCCCccceeeCCCCCCEEEEEECCCC--CEEEEEcCCCeEEE-EECCCCc
Confidence 99999998876544 3568999999 78999999999999 9987543
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=100.00 E-value=2.1e-31 Score=282.75 Aligned_cols=241 Identities=15% Similarity=0.154 Sum_probs=200.8
Q ss_pred cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE----EecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108 44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE----TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD 119 (703)
Q Consensus 44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~----~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd 119 (703)
..|...|++++|+| + ..|++|+.||+|+|||+.+++.... ..+|.+.|.+++|+|+|++|++|+.|++|++||
T Consensus 79 ~~~~~~v~~~~~s~--d-~~l~~~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spdg~~l~sgs~d~~i~iwd 155 (344)
T 4gqb_B 79 VQTEAGVADLTWVG--E-RGILVASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSSGTQAVSGSKDICIKVWD 155 (344)
T ss_dssp EEESSCEEEEEEET--T-TEEEEEETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEE
T ss_pred eccCCCEEEEEEeC--C-CeEEEEECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCCCCEEEEEeCCCeEEEEE
Confidence 34678899999999 7 4788999999999999998765432 336999999999999999999999999999999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
+++++.+..+.+|.. .|.+++|+|++. .|++++.|++|++||++++++...+....
T Consensus 156 ~~~~~~~~~~~~h~~--------------------~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~--- 212 (344)
T 4gqb_B 156 LAQQVVLSSYRAHAA--------------------QVTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSA--- 212 (344)
T ss_dssp TTTTEEEEEECCCSS--------------------CEEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC------
T ss_pred CCCCcEEEEEcCcCC--------------------ceEEEEecCCCCCceeeeccccccccccccccceeeeeecce---
Confidence 999999999988765 899999999884 78899999999999999998877764322
Q ss_pred cccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC-CEEEEEeCCC-EE
Q psy7108 199 LDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG-QAWVAATTEG-VH 275 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-v~ 275 (703)
+...+.+++|+|++. ++++++.+ ..|++||+++++++..+.+|...|++++|+|++ ++|++++.|+ |+
T Consensus 213 ---~~~~~~~~~~~p~~~~~l~sg~~d------g~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~ 283 (344)
T 4gqb_B 213 ---PGYLPTSLAWHPQQSEVFVFGDEN------GTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLA 283 (344)
T ss_dssp ----CCCEEEEEECSSCTTEEEEEETT------SEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEE
T ss_pred ---eeccceeeeecCCCCcceEEeccC------CcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEE
Confidence 223678999999765 55555554 389999999999999999999999999999998 5789999999 99
Q ss_pred EEEcCCCceec-----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 276 IYSLDSGYVFD-----PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 276 iwd~~~~~~~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
|||+.+++.+. ..+.+++|+|++. .++++++.|+.+++ |.+...
T Consensus 284 vwd~~~~~~~~~~~H~~~V~~v~~sp~~~-~llas~s~D~~v~~-w~v~~~ 332 (344)
T 4gqb_B 284 VLDSSLSELFRSQAHRDFVRDATWSPLNH-SLLTTVGWDHQVVH-HVVPTE 332 (344)
T ss_dssp EECTTCCEEEEECCCSSCEEEEEECSSST-TEEEEEETTSCEEE-EECCC-
T ss_pred EEECCCCcEEEEcCCCCCEEEEEEeCCCC-eEEEEEcCCCeEEE-EECCCC
Confidence 99999887643 3457899999882 35778999999998 998754
No 7
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=100.00 E-value=3.2e-31 Score=278.26 Aligned_cols=243 Identities=19% Similarity=0.291 Sum_probs=211.1
Q ss_pred CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe
Q psy7108 35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ 114 (703)
Q Consensus 35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~ 114 (703)
+.++ +.+.+|...|++++|+| ++.+|++|+.|++|++||+.+++....+..|...|.+++|+|+++.|++|+.|++
T Consensus 55 ~~~~--~~~~~h~~~v~~~~~s~--dg~~l~s~s~D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~ 130 (319)
T 3frx_A 55 GVPV--RSFKGHSHIVQDCTLTA--DGAYALSASWDKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKT 130 (319)
T ss_dssp EEEE--EEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSC
T ss_pred cccc--eEEeCCcccEEEEEECC--CCCEEEEEeCCCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCe
Confidence 3455 78999999999999999 9999999999999999999999888888889999999999999999999999999
Q ss_pred EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC------CCEEEEEecCCcEEEEECCCCceE
Q psy7108 115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD------GSCILAAGQSKYICIYSSREGILL 188 (703)
Q Consensus 115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd------g~~l~s~s~dg~I~lwD~~~~~~~ 188 (703)
|++||++ ++.+..+.+|.. .|.+++|+|. +..+++++.|+.|++||+++++..
T Consensus 131 i~vwd~~-~~~~~~~~~h~~--------------------~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~ 189 (319)
T 3frx_A 131 IKVWTIK-GQCLATLLGHND--------------------WVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIE 189 (319)
T ss_dssp EEEEETT-SCEEEEECCCSS--------------------CEEEEEECCC------CCEEEEEETTSCEEEEETTTTEEE
T ss_pred EEEEECC-CCeEEEEeccCC--------------------cEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhh
Confidence 9999996 556667766654 8999999985 458999999999999999998887
Q ss_pred EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEE
Q psy7108 189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVA 268 (703)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s 268 (703)
..+..| ...|.+++|+|+|+++++++.++ .|++||+.+++.+..+..+ ..|.+++|+|++.++++
T Consensus 190 ~~~~~h--------~~~v~~~~~sp~g~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~-~~v~~~~~sp~~~~la~ 254 (319)
T 3frx_A 190 ADFIGH--------NSNINTLTASPDGTLIASAGKDG------EIMLWNLAAKKAMYTLSAQ-DEVFSLAFSPNRYWLAA 254 (319)
T ss_dssp EEECCC--------CSCEEEEEECTTSSEEEEEETTC------EEEEEETTTTEEEEEEECC-SCEEEEEECSSSSEEEE
T ss_pred eeecCC--------CCcEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCC-CcEEEEEEcCCCCEEEE
Confidence 776644 44899999999999999888764 8999999999887777654 67999999999999999
Q ss_pred EeCCCEEEEEcCCCceecc--------------eeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 269 ATTEGVHIYSLDSGYVFDP--------------FLLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 269 ~s~Dgv~iwd~~~~~~~~~--------------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
++.+++++|+++.+..... ...+++|+|++ .++++++.|+.+++ |++..
T Consensus 255 ~~~~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg--~~l~sg~~Dg~i~v-Wd~~t 317 (319)
T 3frx_A 255 ATATGIKVFSLDPQYLVDDLRPEFAGYSKAAEPHAVSLAWSADG--QTLFAGYTDNVIRV-WQVMT 317 (319)
T ss_dssp EETTEEEEEEETTEEEEEEECCCCTTCCGGGCCCEEEEEECTTS--SEEEEEETTSCEEE-EEEEE
T ss_pred EcCCCcEEEEeCcCeeeeccCccccccccCcCcceeEEEECCCC--CEEEEeecCceEEE-EEEee
Confidence 9988899999887654322 23579999999 89999999999998 98754
No 8
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.1e-31 Score=280.00 Aligned_cols=252 Identities=15% Similarity=0.255 Sum_probs=217.1
Q ss_pred ccCCCccccccccCCCcCeEEEEEcCC--CCCCEEEEEeCCCcEEEEEcCCCcee--EEEecCCCcEEEEEEecCCCEEE
Q psy7108 32 DMAARVLKPEVLSGHEGPVSCIEFSPV--LSSTGMVSASWDKTVKLWNAVETDTQ--HETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 32 d~tg~~~~~~~l~gH~~~V~~l~~sp~--~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~spdg~~la 107 (703)
+..|.+. +.+.+|.++|++++|+|. .++.+|+||+.|++|++|++.++... ..+.+|...|.+++|+|++..++
T Consensus 19 ~~~g~~~--~~~~~H~~~V~~v~~~~~~~~~~~~l~tgs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~~~~l~ 96 (321)
T 3ow8_A 19 NQYGILF--KQEQAHDDAIWSVAWGTNKKENSETVVTGSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHTLPIAA 96 (321)
T ss_dssp --CEEEE--EETTSSSSCEEEEEEC-------CEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSSSSEEE
T ss_pred hhhhhee--eecccCCCcEEEEEEecCCCCCCCEEEEEcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCCCCEEE
Confidence 4456666 788899999999999982 13569999999999999999776432 34567999999999999999999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL 187 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~ 187 (703)
+++.|++|++||+++++.+..+..+.. .+.+++|+|++++|++++.|+.|++||+++++.
T Consensus 97 s~s~D~~i~lWd~~~~~~~~~~~~~~~--------------------~~~~~~~spdg~~l~~g~~dg~v~i~~~~~~~~ 156 (321)
T 3ow8_A 97 SSSLDAHIRLWDLENGKQIKSIDAGPV--------------------DAWTLAFSPDSQYLATGTHVGKVNIFGVESGKK 156 (321)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCTT--------------------CCCCEEECTTSSEEEEECTTSEEEEEETTTCSE
T ss_pred EEeCCCcEEEEECCCCCEEEEEeCCCc--------------------cEEEEEECCCCCEEEEEcCCCcEEEEEcCCCce
Confidence 999999999999999999988877654 678899999999999999999999999999988
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
...+..+. ..+.+++|+|+|+++++++.++ .|++||+++++.+..+.+|...|.+++|+|++++|+
T Consensus 157 ~~~~~~~~--------~~v~~~~~spdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~ 222 (321)
T 3ow8_A 157 EYSLDTRG--------KFILSIAYSPDGKYLASGAIDG------IINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLV 222 (321)
T ss_dssp EEEEECSS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEE
T ss_pred eEEecCCC--------ceEEEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEE
Confidence 87776544 3789999999999999988764 899999999999999999999999999999999999
Q ss_pred EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108 268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~ 322 (703)
+++.|+ |++||+.++.....+ ..+++|+|++ ..+++++.|+.+++ |++....
T Consensus 223 s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~--~~l~s~s~D~~v~i-wd~~~~~ 281 (321)
T 3ow8_A 223 TASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDD--THFVSSSSDKSVKV-WDVGTRT 281 (321)
T ss_dssp EECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEE-EETTTTE
T ss_pred EEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCC--CEEEEEeCCCcEEE-EeCCCCE
Confidence 999999 999999988764433 4679999999 78999999999999 9987543
No 9
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.4e-30 Score=275.96 Aligned_cols=248 Identities=15% Similarity=0.181 Sum_probs=215.5
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEecC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~spd 102 (703)
+++|| .+++.+ ..+..|...|.+++|+| ++++|++|+.|+.+++|++.+.. .......|.+.|.+++|+++
T Consensus 79 v~iWd~~~~~~~--~~~~~~~~~v~~~~~s~--~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~ 154 (340)
T 1got_B 79 LIIWDSYTTNKV--HAIPLRSSWVMTCAYAP--SGNYVACGGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDD 154 (340)
T ss_dssp EEEEETTTCCEE--EEEECSSSCEEEEEECT--TSSEEEEEETTCEEEEEETTTCSBSCEEEEEEECCSSCEEEEEEEET
T ss_pred EEEEECCCCCcc--eEeecCCccEEEEEECC--CCCEEEEEeCCCeEEEEECccCCCcceeEEEecCCCccEEEEEECCC
Confidence 66777 567777 88999999999999999 99999999999999999998753 23455679999999999988
Q ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108 103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS 182 (703)
Q Consensus 103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~ 182 (703)
+. +++++.|++|++||+++++.+..+.+|.. .|.+++|+|+++++++|+.|+.|++||+
T Consensus 155 ~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~sg~~d~~v~~wd~ 213 (340)
T 1got_B 155 NQ-IVTSSGDTTCALWDIETGQQTTTFTGHTG--------------------DVMSLSLAPDTRLFVSGACDASAKLWDV 213 (340)
T ss_dssp TE-EEEEETTSCEEEEETTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEET
T ss_pred Cc-EEEEECCCcEEEEECCCCcEEEEEcCCCC--------------------ceEEEEECCCCCEEEEEeCCCcEEEEEC
Confidence 75 88999999999999999999988888765 8999999999999999999999999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEEEEc
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFS 260 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~s 260 (703)
+++.+...+..|. ..|.+++|+|+++.+++++.++ .|++||+++++....+.. +...|.+++|+
T Consensus 214 ~~~~~~~~~~~h~--------~~v~~v~~~p~~~~l~s~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~s 279 (340)
T 1got_B 214 REGMCRQTFTGHE--------SDINAICFFPNGNAFATGSDDA------TCRLFDLRADQELMTYSHDNIICGITSVSFS 279 (340)
T ss_dssp TTCSEEEEECCCS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEEEEEC
T ss_pred CCCeeEEEEcCCc--------CCEEEEEEcCCCCEEEEEcCCC------cEEEEECCCCcEEEEEccCCcccceEEEEEC
Confidence 9999888876544 4899999999999999888764 899999998876655542 33579999999
Q ss_pred CCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 261 PTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
|+|++|++|+.|+ |++||+.++.....+ +.+++|+|++ ..+++++.|+.+++ |+
T Consensus 280 ~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s~s~D~~i~i-Wd 340 (340)
T 1got_B 280 KSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDG--MAVATGSWDSFLKI-WN 340 (340)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS--SCEEEEETTSCEEE-EC
T ss_pred CCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCC--CEEEEEcCCccEEe-cC
Confidence 9999999999999 999999887764433 4679999999 88999999999988 64
No 10
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=100.00 E-value=1.1e-30 Score=276.76 Aligned_cols=241 Identities=15% Similarity=0.222 Sum_probs=213.8
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+++.+|.++|++++|+| ++++|++|+.||+|++||+.++.....+..|...|.+++|+|++++|++|+.|+.|++||+
T Consensus 49 ~~l~gH~~~v~~~~~s~--d~~~l~s~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~v~iw~~ 126 (340)
T 1got_B 49 RTLRGHLAKIYAMHWGT--DSRLLLSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNICSIYNL 126 (340)
T ss_dssp EEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCEEEEEET
T ss_pred eeecCCCCceEEEEECC--CCCEEEEEeCCCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 78999999999999999 9999999999999999999998888888889999999999999999999999999999999
Q ss_pred CCCc----EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108 121 ESAA----QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN 196 (703)
Q Consensus 121 ~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~ 196 (703)
.+++ ....+.+|. +.|.++.|++++. +++++.|++|++||+++++++..+..|.
T Consensus 127 ~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~- 184 (340)
T 1got_B 127 KTREGNVRVSRELAGHT--------------------GYLSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHT- 184 (340)
T ss_dssp TTCSBSCEEEEEEECCS--------------------SCEEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCS-
T ss_pred ccCCCcceeEEEecCCC--------------------ccEEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCC-
Confidence 8753 344555554 4899999998875 8899999999999999999888876544
Q ss_pred CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EE
Q psy7108 197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VH 275 (703)
Q Consensus 197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~ 275 (703)
..|.+++|+|+++.+++++.++ .|++||++++++...+.+|...|.+++|+|++++|++++.|+ |+
T Consensus 185 -------~~v~~~~~~~~~~~l~sg~~d~------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v~ 251 (340)
T 1got_B 185 -------GDVMSLSLAPDTRLFVSGACDA------SAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCR 251 (340)
T ss_dssp -------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEE
T ss_pred -------CceEEEEECCCCCEEEEEeCCC------cEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcEE
Confidence 4899999999999988887764 899999999999999999999999999999999999999999 99
Q ss_pred EEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 276 IYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 276 iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+||+.+++....+ ..+++|+|++ .++++++.++.+.+ |++...
T Consensus 252 iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~g~~d~~i~v-wd~~~~ 302 (340)
T 1got_B 252 LFDLRADQELMTYSHDNIICGITSVSFSKSG--RLLLAGYDDFNCNV-WDALKA 302 (340)
T ss_dssp EEETTTTEEEEEECCTTCCSCEEEEEECTTS--SEEEEEETTSEEEE-EETTTC
T ss_pred EEECCCCcEEEEEccCCcccceEEEEECCCC--CEEEEECCCCeEEE-EEcccC
Confidence 9999987764332 3678999999 88999999999998 987543
No 11
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.97 E-value=6.7e-31 Score=280.45 Aligned_cols=248 Identities=15% Similarity=0.178 Sum_probs=197.5
Q ss_pred cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee----EEEecCCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ----HETIQLLSDALCVAYKPDGTEIVVATLDGQLIM 117 (703)
Q Consensus 42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~----~~~~~~~~~V~~v~~spdg~~las~s~dg~I~v 117 (703)
...+|...|++++|+| ++. +++++.||+|++||+.+++.. .....|.+.|.+++|+|++++|++|+.|+.|++
T Consensus 89 ~~~~~~~~V~~~~~s~--d~~-~l~~s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~sgs~dg~v~i 165 (357)
T 4g56_B 89 AGVQTEAGVTDVAWVS--EKG-ILVASDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSDGTQAVSGGKDFSVKV 165 (357)
T ss_dssp EEEECSSCEEEEEEET--TTE-EEEEETTSCEEEC--------CCCCEEECCCSSCEEEEEECSSSSEEEEEETTSCEEE
T ss_pred ccCCCCCCEEEEEEcC--CCC-EEEEECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 4457999999999999 765 556788999999999877533 233468999999999999999999999999999
Q ss_pred EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEEEeccC
Q psy7108 118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKFTITQN 196 (703)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~ 196 (703)
||+++++.+..+.+|.. .|++++|+|++. .+++++.|+.|++||++++++...+..
T Consensus 166 wd~~~~~~~~~~~~h~~--------------------~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~--- 222 (357)
T 4g56_B 166 WDLSQKAVLKSYNAHSS--------------------EVNCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDF--- 222 (357)
T ss_dssp EETTTTEEEEEECCCSS--------------------CEEEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCC---
T ss_pred EECCCCcEEEEEcCCCC--------------------CEEEEEEccCCCceeeeeccCCceEEEECCCCceeeeeee---
Confidence 99999999999988765 899999999875 788999999999999999876654432
Q ss_pred CccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC-CEEEEEeCCC-
Q psy7108 197 KSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG-QAWVAATTEG- 273 (703)
Q Consensus 197 ~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg-~~l~s~s~Dg- 273 (703)
..+...+.+++|+|++. .+++++.+ ..|++||++++++...+.+|...|++++|+|++ ++|++++.|+
T Consensus 223 ---~~~~~~v~~v~~sp~~~~~la~g~~d------~~i~~wd~~~~~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~ 293 (357)
T 4g56_B 223 ---CASDTIPTSVTWHPEKDDTFACGDET------GNVSLVNIKNPDSAQTSAVHSQNITGLAYSYHSSPFLASISEDCT 293 (357)
T ss_dssp ---TTCCSCEEEEEECTTSTTEEEEEESS------SCEEEEESSCGGGCEEECCCSSCEEEEEECSSSSCCEEEEETTSC
T ss_pred ---ccccccccchhhhhcccceEEEeecc------cceeEEECCCCcEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCE
Confidence 22345789999999865 45555544 379999999999999999999999999999997 5789999999
Q ss_pred EEEEEcCCCceecc-----eeeeEEEcc-chhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108 274 VHIYSLDSGYVFDP-----FLLDISITP-QSVKEALADKDYAKALMMSLKLNEQGLIIHV 327 (703)
Q Consensus 274 v~iwd~~~~~~~~~-----~~~~~~~sp-d~~~~~l~sg~~~~~l~la~~l~~~~~~~~v 327 (703)
|+|||+++++.+.. .+.+++|+| ++ ..+++++.|+.+++ |++........+
T Consensus 294 i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~--~~l~s~s~Dg~v~i-W~~~~~~~~~~~ 350 (357)
T 4g56_B 294 VAVLDADFSEVFRDLSHRDFVTGVAWSPLDH--SKFTTVGWDHKVLH-HHLPSEGRTENL 350 (357)
T ss_dssp EEEECTTSCEEEEECCCSSCEEEEEECSSST--TEEEEEETTSCEEE-EECC--------
T ss_pred EEEEECCCCcEeEECCCCCCEEEEEEeCCCC--CEEEEEcCCCeEEE-EECCCCCccccc
Confidence 99999999887543 357799998 67 78999999999999 998766544444
No 12
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=1.3e-29 Score=270.21 Aligned_cols=249 Identities=14% Similarity=0.206 Sum_probs=215.3
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC------ceeEEEecCCCcEEEEEEe
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET------DTQHETIQLLSDALCVAYK 100 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~------~~~~~~~~~~~~V~~v~~s 100 (703)
+++|| .+++.. ..+..|...|.+++|+| ++..|++|+.|+.+++|++... .....+..|.+.|.+++|+
T Consensus 88 v~vWd~~~~~~~--~~~~~~~~~v~~~~~sp--~g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 163 (354)
T 2pbi_B 88 VIVWDSFTTNKE--HAVTMPCTWVMACAYAP--SGCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFT 163 (354)
T ss_dssp EEEEETTTCCEE--EEEECSSSCCCEEEECT--TSSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEEC
T ss_pred EEEEECCCCCcc--eEEecCCCCEEEEEECC--CCCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEEEEEe
Confidence 66777 467777 78889999999999999 9999999999999999998643 1345566799999999999
Q ss_pred cCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEE
Q psy7108 101 PDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYIC 178 (703)
Q Consensus 101 pdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~ 178 (703)
|++..|++++.|++|++||+++++.+..+.+|.. .|.+++|+| +++.|++|+.|++|+
T Consensus 164 ~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~g~~l~sgs~Dg~v~ 223 (354)
T 2pbi_B 164 NSDMQILTASGDGTCALWDVESGQLLQSFHGHGA--------------------DVLCLDLAPSETGNTFVSGGCDKKAM 223 (354)
T ss_dssp SSSSEEEEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEECCCSSCCEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCCCC--------------------CeEEEEEEeCCCCCEEEEEeCCCeEE
Confidence 9999999999999999999999999999988765 899999987 578999999999999
Q ss_pred EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEE
Q psy7108 179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFC 256 (703)
Q Consensus 179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~ 256 (703)
+||+++++++..+..|. ..|++++|+|++..+++++.++ .|++||+++++....+.. +...+.+
T Consensus 224 ~wd~~~~~~~~~~~~h~--------~~v~~v~~~p~~~~l~s~s~D~------~v~lwd~~~~~~~~~~~~~~~~~~~~~ 289 (354)
T 2pbi_B 224 VWDMRSGQCVQAFETHE--------SDVNSVRYYPSGDAFASGSDDA------TCRLYDLRADREVAIYSKESIIFGASS 289 (354)
T ss_dssp EEETTTCCEEEEECCCS--------SCEEEEEECTTSSEEEEEETTS------CEEEEETTTTEEEEEECCTTCCSCEEE
T ss_pred EEECCCCcEEEEecCCC--------CCeEEEEEeCCCCEEEEEeCCC------eEEEEECCCCcEEEEEcCCCcccceeE
Confidence 99999999988876544 4899999999999999888764 899999998876655543 3457899
Q ss_pred EEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 257 VKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 257 l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
++|+|+|++|++++.|+ |++||+.+++....+ ..+++|+|++ .++++++.|+.+++ |.
T Consensus 290 ~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg--~~l~sgs~D~~v~v-W~ 354 (354)
T 2pbi_B 290 VDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDG--TAFCSGSWDHTLRV-WA 354 (354)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTS--SCEEEEETTSEEEE-EC
T ss_pred EEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCC--CEEEEEcCCCCEEe-cC
Confidence 99999999999999999 999999888764433 4679999999 89999999999988 63
No 13
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=7.2e-30 Score=271.05 Aligned_cols=260 Identities=13% Similarity=0.195 Sum_probs=203.8
Q ss_pred ceeeccCCCc-c-ccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCC
Q psy7108 28 VKKGDMAARV-L-KPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDG 103 (703)
Q Consensus 28 v~~~d~tg~~-~-~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg 103 (703)
+++|+..+.. . ......+|.+.|++++|+| ++++|++|+.|+++++|++..+. ....+..|...|.+++|+|++
T Consensus 40 i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp--~g~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~ 117 (345)
T 3fm0_A 40 IRIWGTEGDSWICKSVLSEGHQRTVRKVAWSP--CGNYLASASFDATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSG 117 (345)
T ss_dssp EEEEEEETTEEEEEEEECSSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTS
T ss_pred EEEEEcCCCcceeeeeeccccCCcEEEEEECC--CCCEEEEEECCCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCC
Confidence 6777754432 1 0123478999999999999 99999999999999999997764 345566799999999999999
Q ss_pred CEEEEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEE
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIY 180 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lw 180 (703)
++|++|+.|++|++||++++.. +..+.+|. ..|.+++|+|++++|++++.|++|++|
T Consensus 118 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~p~~~~l~s~s~d~~i~~w 177 (345)
T 3fm0_A 118 NLLATCSRDKSVWVWEVDEEDEYECVSVLNSHT--------------------QDVKHVVWHPSQELLASASYDDTVKLY 177 (345)
T ss_dssp SEEEEEETTSCEEEEEECTTSCEEEEEEECCCC--------------------SCEEEEEECSSSSCEEEEETTSCEEEE
T ss_pred CEEEEEECCCeEEEEECCCCCCeEEEEEecCcC--------------------CCeEEEEECCCCCEEEEEeCCCcEEEE
Confidence 9999999999999999987643 44455554 389999999999999999999999999
Q ss_pred ECCCCceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc---------------c
Q psy7108 181 SSREGILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD---------------M 243 (703)
Q Consensus 181 D~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~---------------~ 243 (703)
|.+++... .++. +|...|.+++|+|+|+++++++.++ .|++||..... +
T Consensus 178 ~~~~~~~~~~~~~~--------~h~~~v~~l~~sp~g~~l~s~s~D~------~v~iW~~~~~~~~~~~~~~~~~~~~~~ 243 (345)
T 3fm0_A 178 REEEDDWVCCATLE--------GHESTVWSLAFDPSGQRLASCSDDR------TVRIWRQYLPGNEQGVACSGSDPSWKC 243 (345)
T ss_dssp EEETTEEEEEEEEC--------CCSSCEEEEEECTTSSEEEEEETTS------CEEEEEEECTTCTTCCCCC---CEEEE
T ss_pred EecCCCEEEEEEec--------CCCCceEEEEECCCCCEEEEEeCCC------eEEEeccccCCCCccceeeccCCccce
Confidence 99887543 3443 4556899999999999999888764 89999864321 1
Q ss_pred ceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce---------------ecceeeeEEEccchhhhHhhcC
Q psy7108 244 AARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV---------------FDPFLLDISITPQSVKEALADK 306 (703)
Q Consensus 244 ~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~---------------~~~~~~~~~~spd~~~~~l~sg 306 (703)
+..+.+ |...|.+++|+|++..|++++.|+ |++|+...+.. +...+.+++|+|++ ..+++++
T Consensus 244 ~~~~~~~h~~~v~~v~~~~~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~laS~ 322 (345)
T 3fm0_A 244 ICTLSGFHSRTIYDIAWCQLTGALATACGDDAIRVFQEDPNSDPQQPTFSLTAHLHQAHSQDVNCVAWNPKE-PGLLASC 322 (345)
T ss_dssp EEEECSSCSSCEEEEEECTTTCCEEEEETTSCEEEEEECTTSCTTSCCEEEEEEETTSSSSCEEEEEECSSS-TTEEEEE
T ss_pred eEEecCCCCCcEEEEEEecCCCEEEEEeCCCeEEEEEeCCCCCcceeeEEEEeeecccccCcEeEeEEeCCC-ceEEEEc
Confidence 223333 788999999999999999999999 99999876431 12335679999986 1378999
Q ss_pred CcceEEEEEEecCchhHHH
Q psy7108 307 DYAKALMMSLKLNEQGLII 325 (703)
Q Consensus 307 ~~~~~l~la~~l~~~~~~~ 325 (703)
+.|+.+++ |++...+.+.
T Consensus 323 s~Dg~v~~-W~~~~~~~~~ 340 (345)
T 3fm0_A 323 SDDGEVAF-WKYQRPEGLH 340 (345)
T ss_dssp ETTSCEEE-EEECC-----
T ss_pred CCCCcEEE-EEecCCCCcc
Confidence 99999999 9998765443
No 14
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.97 E-value=6e-30 Score=272.73 Aligned_cols=242 Identities=17% Similarity=0.285 Sum_probs=211.3
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+++.+|.++|++++|+| ++.+|+||+.||+|++||..++........|...|.+++|+|+|+.+++++.|+.+++|++
T Consensus 58 ~~l~gH~~~V~~~~~s~--d~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~~i~v~~~ 135 (354)
T 2pbi_B 58 RTLKGHGNKVLCMDWCK--DKRRIVSSSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDNKCSVYPL 135 (354)
T ss_dssp EEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTSEEEEEEC
T ss_pred EEecCCCCeEEEEEECC--CCCEEEEEeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCCCEEEEEE
Confidence 78899999999999999 9999999999999999999988877777788899999999999999999999999999998
Q ss_pred CCCc------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108 121 ESAA------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT 194 (703)
Q Consensus 121 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~ 194 (703)
.... ....+.+ |.+.|.+++|+|+++.|++++.|++|++||+++++++..+..|
T Consensus 136 ~~~~~~~~~~~~~~~~~--------------------h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~~h 195 (354)
T 2pbi_B 136 TFDKNENMAAKKKSVAM--------------------HTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLLQSFHGH 195 (354)
T ss_dssp CCCTTCCSGGGCEEEEE--------------------CSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred eccccccccccceeeec--------------------cCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEcCC
Confidence 6532 1223333 4558999999999999999999999999999999999888765
Q ss_pred cCCccccccccceeeeecc--CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC
Q psy7108 195 QNKSLDGINDFINRRKMTE--FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE 272 (703)
Q Consensus 195 ~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D 272 (703)
.. .|.+++++| +|+.+++++.++ .|++||+++++++..+..|...|.+++|+|+++.|++++.|
T Consensus 196 ~~--------~v~~~~~~~~~~g~~l~sgs~Dg------~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 196 GA--------DVLCLDLAPSETGNTFVSGGCDK------KAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp SS--------CEEEEEECCCSSCCEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CC--------CeEEEEEEeCCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC
Confidence 54 788888887 567888877664 89999999999999999999999999999999999999999
Q ss_pred C-EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 273 G-VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 273 g-v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+ |++||+.++.....+ ...++|+|++ .++++++.++.+++ |++...
T Consensus 262 ~~v~lwd~~~~~~~~~~~~~~~~~~~~~~~~s~~g--~~l~~g~~d~~i~v-wd~~~~ 316 (354)
T 2pbi_B 262 ATCRLYDLRADREVAIYSKESIIFGASSVDFSLSG--RLLFAGYNDYTINV-WDVLKG 316 (354)
T ss_dssp SCEEEEETTTTEEEEEECCTTCCSCEEEEEECTTS--SEEEEEETTSCEEE-EETTTC
T ss_pred CeEEEEECCCCcEEEEEcCCCcccceeEEEEeCCC--CEEEEEECCCcEEE-EECCCC
Confidence 9 999999887654322 2568999999 88999999999999 987544
No 15
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=6.7e-30 Score=270.93 Aligned_cols=242 Identities=18% Similarity=0.235 Sum_probs=197.1
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
..+.+|...|++++|+| ++.++++|+.|++|++||+.+++....+..|...|.+++|+|++++|++++.|++|++||+
T Consensus 70 ~~l~~h~~~V~~~~~~~--~~~~l~s~s~D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~ 147 (343)
T 2xzm_R 70 KALTGHNHFVSDLALSQ--ENCFAISSSWDKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNI 147 (343)
T ss_dssp EEECCCSSCEEEEEECS--STTEEEEEETTSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEES
T ss_pred chhccCCCceEEEEECC--CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEec
Confidence 67899999999999999 9999999999999999999999888888889999999999999999999999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC----------CEEEEEecCCcEEEEECCCCceEEE
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG----------SCILAAGQSKYICIYSSREGILLKK 190 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg----------~~l~s~s~dg~I~lwD~~~~~~~~~ 190 (703)
... ....... ...|...|.+++|+|++ .++++++.|+.|++||. .......
T Consensus 148 ~~~-~~~~~~~-----------------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~-~~~~~~~ 208 (343)
T 2xzm_R 148 LGE-CKFSSAE-----------------KENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNT-NFQIRYT 208 (343)
T ss_dssp SSC-EEEECCT-----------------TTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEET-TTEEEEE
T ss_pred cCC-ceeeeec-----------------ccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcC-CCceeEE
Confidence 743 2222221 11245589999999987 78999999999999994 4555556
Q ss_pred EEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108 191 FTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s 270 (703)
+..| ...|.+++|+|+|+++++++.++ .|++||+.+.........+...|.+++|+|+++++++++
T Consensus 209 ~~~h--------~~~v~~~~~s~~g~~l~sgs~dg------~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~~~la~~~ 274 (343)
T 2xzm_R 209 FKAH--------ESNVNHLSISPNGKYIATGGKDK------KLLIWDILNLTYPQREFDAGSTINQIAFNPKLQWVAVGT 274 (343)
T ss_dssp EECC--------SSCEEEEEECTTSSEEEEEETTC------EEEEEESSCCSSCSEEEECSSCEEEEEECSSSCEEEEEE
T ss_pred EcCc--------cccceEEEECCCCCEEEEEcCCC------eEEEEECCCCcccceeecCCCcEEEEEECCCCCEEEEEC
Confidence 5544 44899999999999999988764 899999954433333333456799999999999887766
Q ss_pred CCCEEEEEcCCCceec-------------------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 271 TEGVHIYSLDSGYVFD-------------------PFLLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 271 ~Dgv~iwd~~~~~~~~-------------------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
.+++++|++.+++... ....+++|+|++ ..+++++.|+.+++ |++..
T Consensus 275 d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~g--~~l~sg~~Dg~v~~-w~~~~ 340 (343)
T 2xzm_R 275 DQGVKIFNLMTQSKAPVCTIEAEPITKAEGQKGKNPQCTSLAWNALG--KKLFAGFTDGVIRT-FSFET 340 (343)
T ss_dssp SSCEEEEESSSCCSCSEEECCCCSGGGBTTBCCSCCCEEEEEECSSS--CCEEEEETTSEEEE-EEEEE
T ss_pred CCCEEEEEeCCCCCCceEEeecCcchhhhhhcCCCCceEEEEECCCC--CeEEEecCCceEEE-EEEEc
Confidence 5559999998765322 123579999999 88999999999998 88653
No 16
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=3.9e-30 Score=272.94 Aligned_cols=222 Identities=11% Similarity=0.131 Sum_probs=181.0
Q ss_pred ceeec-cCCCcccc--ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108 28 VKKGD-MAARVLKP--EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~--~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~ 104 (703)
+++|| .+++++.. ..+.+|.+.|++++|+| ++++|++|+.|++|++||+.+++....+..|.+.|.+++|+|++.
T Consensus 105 v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~sp--dg~~l~sgs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~ 182 (344)
T 4gqb_B 105 VELWELDENETLIVSKFCKYEHDDIVSTVSVLS--SGTQAVSGSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKD 182 (344)
T ss_dssp EEEEEECTTSSCEEEEEEEECCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCT
T ss_pred EEEEeccCCCceeEeeccccCCCCCEEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCC
Confidence 45555 35655410 23458999999999999 999999999999999999999988888888999999999999985
Q ss_pred -EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEEC
Q psy7108 105 -EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSS 182 (703)
Q Consensus 105 -~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~ 182 (703)
.|++++.|++|++||+++++....+..+. +...+.+++|+|+ +++|++|+.|++|++||+
T Consensus 183 ~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~------------------~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~ 244 (344)
T 4gqb_B 183 SVFLSCSEDNRILLWDTRCPKPASQIGCSA------------------PGYLPTSLAWHPQQSEVFVFGDENGTVSLVDT 244 (344)
T ss_dssp TEEEEEETTSCEEEEETTSSSCEEECC----------------------CCCEEEEEECSSCTTEEEEEETTSEEEEEES
T ss_pred Cceeeeccccccccccccccceeeeeecce------------------eeccceeeeecCCCCcceEEeccCCcEEEEEC
Confidence 78999999999999999998887765432 2336899999995 578889999999999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP 261 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp 261 (703)
++++++.++..|.. .|++++|+|++. ++++++.+ +.|++||+.+++.. .+.+|...|++++|+|
T Consensus 245 ~~~~~~~~~~~h~~--------~v~~v~fsp~g~~~lasgs~D------~~i~vwd~~~~~~~-~~~~H~~~V~~v~~sp 309 (344)
T 4gqb_B 245 KSTSCVLSSAVHSQ--------CVTGLVFSPHSVPFLASLSED------CSLAVLDSSLSELF-RSQAHRDFVRDATWSP 309 (344)
T ss_dssp CC--CCEEEECCSS--------CEEEEEECSSSSCCEEEEETT------SCEEEECTTCCEEE-EECCCSSCEEEEEECS
T ss_pred CCCcEEEEEcCCCC--------CEEEEEEccCCCeEEEEEeCC------CeEEEEECCCCcEE-EEcCCCCCEEEEEEeC
Confidence 99999888876554 899999999985 55565554 38999999988754 5678999999999999
Q ss_pred CCCE-EEEEeCCC-EEEEEcCCCce
Q psy7108 262 TGQA-WVAATTEG-VHIYSLDSGYV 284 (703)
Q Consensus 262 dg~~-l~s~s~Dg-v~iwd~~~~~~ 284 (703)
+++. |++++.|+ |++|++++...
T Consensus 310 ~~~~llas~s~D~~v~~w~v~~~~~ 334 (344)
T 4gqb_B 310 LNHSLLTTVGWDHQVVHHVVPTEPL 334 (344)
T ss_dssp SSTTEEEEEETTSCEEEEECCC---
T ss_pred CCCeEEEEEcCCCeEEEEECCCCCC
Confidence 9875 67999999 99999987543
No 17
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=7.7e-30 Score=267.70 Aligned_cols=240 Identities=18% Similarity=0.248 Sum_probs=202.0
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----eeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----TQHETIQLLSDALCVAYKPDGTEIVVATLDGQL 115 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I 115 (703)
.+|.||.++|++++|+|. ++++|+||+.|++|++|++.... ....+..|...|.+++|+|++++|++|+.|++|
T Consensus 11 ~~l~gH~~~V~~l~~~~~-~~~~l~s~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~s~D~~v 89 (319)
T 3frx_A 11 GTLEGHNGWVTSLATSAG-QPNLLLSASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTADGAYALSASWDKTL 89 (319)
T ss_dssp EEECCCSSCEEEEEECSS-CTTEEEEEETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred EEEccccceEEEEEccCC-CccEEEEecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCCCCEEEEEeCCCEE
Confidence 688999999999999992 34899999999999999986432 244566799999999999999999999999999
Q ss_pred EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108 116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ 195 (703)
Q Consensus 116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~ 195 (703)
++||+++++.+..+.+|.. .|.+++|+|++++|++|+.|++|++||++. .++..+..
T Consensus 90 ~~wd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~-~~~~~~~~-- 146 (319)
T 3frx_A 90 RLWDVATGETYQRFVGHKS--------------------DVMSVDIDKKASMIISGSRDKTIKVWTIKG-QCLATLLG-- 146 (319)
T ss_dssp EEEETTTTEEEEEEECCSS--------------------CEEEEEECTTSCEEEEEETTSCEEEEETTS-CEEEEECC--
T ss_pred EEEECCCCCeeEEEccCCC--------------------cEEEEEEcCCCCEEEEEeCCCeEEEEECCC-CeEEEEec--
Confidence 9999999999999988765 899999999999999999999999999974 45555543
Q ss_pred CCccccccccceeeeeccCC------CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEE
Q psy7108 196 NKSLDGINDFINRRKMTEFG------NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAA 269 (703)
Q Consensus 196 ~~~~~~~~~~v~~~~~spdg------~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~ 269 (703)
|...+.++.++|.+ ..+++++.++ .|++||+++++....+.+|...|.+++|+|+|++|+++
T Consensus 147 ------h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~------~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~ 214 (319)
T 3frx_A 147 ------HNDWVSQVRVVPNEKADDDSVTIISAGNDK------MVKAWNLNQFQIEADFIGHNSNINTLTASPDGTLIASA 214 (319)
T ss_dssp ------CSSCEEEEEECCC------CCEEEEEETTS------CEEEEETTTTEEEEEECCCCSCEEEEEECTTSSEEEEE
T ss_pred ------cCCcEEEEEEccCCCCCCCccEEEEEeCCC------EEEEEECCcchhheeecCCCCcEEEEEEcCCCCEEEEE
Confidence 44588999999854 3666666553 89999999998888889999999999999999999999
Q ss_pred eCCC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 270 TTEG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 270 s~Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
+.|+ |++||+.+++....+ ..+++|+|++ ..++.+..++ +.+ |.++.
T Consensus 215 ~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~--~~la~~~~~~-i~v-~~~~~ 267 (319)
T 3frx_A 215 GKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNR--YWLAAATATG-IKV-FSLDP 267 (319)
T ss_dssp ETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSS--SEEEEEETTE-EEE-EEETT
T ss_pred eCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCC--CEEEEEcCCC-cEE-EEeCc
Confidence 9999 999999998775444 3679999999 6666665443 555 66543
No 18
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=2.1e-29 Score=262.97 Aligned_cols=252 Identities=23% Similarity=0.344 Sum_probs=216.4
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|+ .+++.. ..+.+|...|.+++|+| ++++|++|+.|+.|++||+.+++....+..|...|.+++|+|++++|
T Consensus 47 i~iw~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l 122 (312)
T 4ery_A 47 IKIWGAYDGKFE--KTISGHKLGISDVAWSS--DSNLLVSASDDKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLI 122 (312)
T ss_dssp EEEEETTTCCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEeCCCcccc--hhhccCCCceEEEEEcC--CCCEEEEECCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEE
Confidence 67777 467777 88999999999999999 99999999999999999999998888888899999999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++|+.|+.|++||+++++.+..+..|.. .|.+++|+|+++++++++.|+.|++||+++++
T Consensus 123 ~s~~~d~~i~iwd~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~ 182 (312)
T 4ery_A 123 VSGSFDESVRIWDVKTGKCLKTLPAHSD--------------------PVSAVHFNRDGSLIVSSSYDGLCRIWDTASGQ 182 (312)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred EEEeCCCcEEEEECCCCEEEEEecCCCC--------------------cEEEEEEcCCCCEEEEEeCCCcEEEEECCCCc
Confidence 9999999999999999999888877654 89999999999999999999999999999998
Q ss_pred eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEE--EEE-cCCC
Q psy7108 187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC--VKF-SPTG 263 (703)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~--l~~-spdg 263 (703)
.+..+... +...+..++|+|+++++++++.++ .|++||+++++....+.+|...+.. ..+ .+++
T Consensus 183 ~~~~~~~~-------~~~~~~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 249 (312)
T 4ery_A 183 CLKTLIDD-------DNPPVSFVKFSPNGKYILAATLDN------TLKLWDYSKGKCLKTYTGHKNEKYCIFANFSVTGG 249 (312)
T ss_dssp EEEEECCS-------SCCCEEEEEECTTSSEEEEEETTT------EEEEEETTTTEEEEEECSSCCSSSCCCEEEECSSS
T ss_pred eeeEEecc-------CCCceEEEEECCCCCEEEEEcCCC------eEEEEECCCCcEEEEEEecCCceEEEEEEEEeCCC
Confidence 87766432 234788899999999999888764 8999999999888888877654322 233 4678
Q ss_pred CEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCC--cceEEEEEEecC
Q psy7108 264 QAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKD--YAKALMMSLKLN 319 (703)
Q Consensus 264 ~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~--~~~~l~la~~l~ 319 (703)
+++++++.|| |++||+.+++....+ ...++++|++ ..+++++ .|+.+++ |+.+
T Consensus 250 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~p~~--~~l~s~~~~~d~~i~~-W~~d 311 (312)
T 4ery_A 250 KWIVSGSEDNLVYIWNLQTKEIVQKLQGHTDVVISTACHPTE--NIIASAALENDKTIKL-WKSD 311 (312)
T ss_dssp CEEEECCTTSCEEEEETTTCCEEEEECCCSSCEEEEEECSSS--SEEEEEECTTTCCEEE-EECC
T ss_pred cEEEEECCCCEEEEEECCCchhhhhhhccCCcEEEEeecCcC--CceEEEEccCCccEEE-ecCC
Confidence 8999999999 999999998875544 3678999999 6666654 6889998 8754
No 19
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=2.1e-29 Score=272.38 Aligned_cols=258 Identities=15% Similarity=0.233 Sum_probs=212.0
Q ss_pred ceeec-cCCCccccccccCCCc------------------CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEG------------------PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI 88 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~------------------~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~ 88 (703)
+++|+ .+|+.+ ..+.+|.. .|++++|+| ++++|++|+.|++|++||+.+++....+.
T Consensus 87 v~i~~~~~g~~~--~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~--dg~~l~s~~~d~~i~iwd~~~~~~~~~~~ 162 (393)
T 1erj_A 87 TQVYRVSDGSLV--ARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSP--DGKFLATGAEDRLIRIWDIENRKIVMILQ 162 (393)
T ss_dssp EEEEETTTCCEE--EEECC-----------------CCCCBEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEEC
T ss_pred EEEEEecCCCEE--EEecCccccccccccccccccCCCceeEEEEEECC--CCCEEEEEcCCCeEEEEECCCCcEEEEEc
Confidence 55666 467766 66665542 499999999 99999999999999999999887777777
Q ss_pred cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCE
Q psy7108 89 QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSC 167 (703)
Q Consensus 89 ~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~ 167 (703)
.|...|.+++|+|+++.|++++.|++|++||+++++....+..+. .+.+++|+| ++++
T Consensus 163 ~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~---------------------~v~~~~~~~~~~~~ 221 (393)
T 1erj_A 163 GHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIED---------------------GVTTVAVSPGDGKY 221 (393)
T ss_dssp CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSS---------------------CEEEEEECSTTCCE
T ss_pred cCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCC---------------------CcEEEEEECCCCCE
Confidence 899999999999999999999999999999999998877776433 689999999 8999
Q ss_pred EEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC------
Q psy7108 168 ILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG------ 241 (703)
Q Consensus 168 l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~------ 241 (703)
|++|+.|+.|++||++++..+..+.... ....+|...|.+++|+|+|+.+++++.++ .|++||+++.
T Consensus 222 l~~~s~d~~v~iwd~~~~~~~~~~~~~~-~~~~~h~~~v~~v~~~~~g~~l~s~s~d~------~v~~wd~~~~~~~~~~ 294 (393)
T 1erj_A 222 IAAGSLDRAVRVWDSETGFLVERLDSEN-ESGTGHKDSVYSVVFTRDGQSVVSGSLDR------SVKLWNLQNANNKSDS 294 (393)
T ss_dssp EEEEETTSCEEEEETTTCCEEEEEC-------CCCSSCEEEEEECTTSSEEEEEETTS------EEEEEEC---------
T ss_pred EEEEcCCCcEEEEECCCCcEEEeecccc-cCCCCCCCCEEEEEECCCCCEEEEEeCCC------EEEEEECCCCCCcccc
Confidence 9999999999999999998877764221 12345777999999999999999887764 8999998763
Q ss_pred ------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEcc------chhhhH
Q psy7108 242 ------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITP------QSVKEA 302 (703)
Q Consensus 242 ------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~sp------d~~~~~ 302 (703)
.+...+.+|...|.+++|+|++++|++++.|+ |++||..+++....+ ..++++++ ++ ..
T Consensus 295 ~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h~~~v~~v~~~~~~~~~p~~--~~ 372 (393)
T 1erj_A 295 KTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEY--NV 372 (393)
T ss_dssp ------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSCTTCTTC--EE
T ss_pred cCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCCCCCEEEEEecCCcCcCCCC--CE
Confidence 33456678999999999999999999999999 999999998875444 35677765 55 68
Q ss_pred hhcCCcceEEEEEEecCc
Q psy7108 303 LADKDYAKALMMSLKLNE 320 (703)
Q Consensus 303 l~sg~~~~~l~la~~l~~ 320 (703)
+++++.|+.+++ |++..
T Consensus 373 l~sgs~Dg~i~i-W~~~~ 389 (393)
T 1erj_A 373 FATGSGDCKARI-WKYKK 389 (393)
T ss_dssp EEEEETTSEEEE-EEEEE
T ss_pred EEEECCCCcEEE-Ccccc
Confidence 999999999999 98754
No 20
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.97 E-value=2.1e-29 Score=262.93 Aligned_cols=243 Identities=19% Similarity=0.306 Sum_probs=212.8
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
.++.+|.++|++++|+| ++++|++|+.||.|++|++.+++....+..|...|.+++|+|++++|++++.|+.|++||+
T Consensus 17 ~~~~gh~~~v~~~~~s~--~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i~vwd~ 94 (312)
T 4ery_A 17 FTLAGHTKAVSSVKFSP--NGEWLASSSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTLKIWDV 94 (312)
T ss_dssp EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEcccCCcEEEEEECC--CCCEEEEeeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEEEEEEC
Confidence 67899999999999999 9999999999999999999988777777789999999999999999999999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
++++.+..+.+|.. .|.+++|+|++++|++++.|+.|++||+++++++..+..+.
T Consensus 95 ~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~----- 149 (312)
T 4ery_A 95 SSGKCLKTLKGHSN--------------------YVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHS----- 149 (312)
T ss_dssp TTCCEEEEEECCSS--------------------CEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCS-----
T ss_pred CCCcEEEEEcCCCC--------------------CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCC-----
Confidence 99999999888765 89999999999999999999999999999999888776544
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG-VHIYS 278 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd 278 (703)
..+.+++|+|+++.+++++.++ .|++||+++++....+. .+...+..++|+|++++|++++.|+ |++||
T Consensus 150 ---~~v~~~~~~~~~~~l~~~~~d~------~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd 220 (312)
T 4ery_A 150 ---DPVSAVHFNRDGSLIVSSSYDG------LCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLDNTLKLWD 220 (312)
T ss_dssp ---SCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETTTEEEEEE
T ss_pred ---CcEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCCCeEEEEE
Confidence 4899999999999998888764 89999999988776654 4567799999999999999999999 99999
Q ss_pred cCCCceeccee--------eeEEEc-cchhhhHhhcCCcceEEEEEEecCchh
Q psy7108 279 LDSGYVFDPFL--------LDISIT-PQSVKEALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 279 ~~~~~~~~~~~--------~~~~~s-pd~~~~~l~sg~~~~~l~la~~l~~~~ 322 (703)
+.+++....+. ....++ +++ .++++++.++.+++ |++....
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~sg~~dg~i~v-wd~~~~~ 270 (312)
T 4ery_A 221 YSKGKCLKTYTGHKNEKYCIFANFSVTGG--KWIVSGSEDNLVYI-WNLQTKE 270 (312)
T ss_dssp TTTTEEEEEECSSCCSSSCCCEEEECSSS--CEEEECCTTSCEEE-EETTTCC
T ss_pred CCCCcEEEEEEecCCceEEEEEEEEeCCC--cEEEEECCCCEEEE-EECCCch
Confidence 99887654442 122333 455 67899999999998 9987653
No 21
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.97 E-value=7.3e-30 Score=264.98 Aligned_cols=240 Identities=15% Similarity=0.157 Sum_probs=198.3
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--ceeEEEecCCCcEEEEEEecC--CCEEEEEECCCeEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQHETIQLLSDALCVAYKPD--GTEIVVATLDGQLI 116 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~ 116 (703)
.++.+|.+.|++++|+| +|++|+||+.|++|++||+.+. +....+..|.+.|.+++|+|+ +++|++|+.|++|+
T Consensus 3 ~~~~~h~~~V~~~~~s~--~g~~las~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~ 80 (297)
T 2pm7_B 3 VIANAHNEMIHDAVMDY--YGKRMATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVM 80 (297)
T ss_dssp EECCSCSSCEEEEEECT--TSSEEEEEETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEE
T ss_pred eeccCCcCceEEEEECC--CCCEEEEEeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEE
Confidence 46789999999999999 9999999999999999999753 345667789999999999864 89999999999999
Q ss_pred EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCce--EEE
Q psy7108 117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGIL--LKK 190 (703)
Q Consensus 117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~--~~~ 190 (703)
+||+++++ .+..+.+|. ..|.+++|+|+ +.+|++++.|++|++||++++.. ...
T Consensus 81 iWd~~~~~~~~~~~~~~h~--------------------~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~ 140 (297)
T 2pm7_B 81 IWKEENGRWSQIAVHAVHS--------------------ASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPII 140 (297)
T ss_dssp EEEBSSSCBCCCEEECCCS--------------------SCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEE
T ss_pred EEEcCCCceEEEEEeecCC--------------------CceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeee
Confidence 99998774 344454444 38999999997 89999999999999999987632 223
Q ss_pred EEeccCCccccccccceeeeeccC-------------CCEEEEEcccCCCCCeeEEECCCCCCCc----cceeecCCccc
Q psy7108 191 FTITQNKSLDGINDFINRRKMTEF-------------GNVSLIETRETHEGGNVVLKLPGVKKGD----MAARVLKPEVR 253 (703)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~spd-------------g~~l~~~~~~~~~~~~~~i~iwd~~~~~----~~~~~~~h~~~ 253 (703)
+. +|...|.+++|+|+ ++.+++++.++ .|++||+++++ ....+.+|...
T Consensus 141 ~~--------~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~------~v~lwd~~~~~~~~~~~~~l~~H~~~ 206 (297)
T 2pm7_B 141 ID--------AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDW 206 (297)
T ss_dssp EE--------CCSSCEEEEEECCCC------------CCEEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSC
T ss_pred ee--------cccCccceEeecCCcccccccCCCCCCcceEEEEcCCC------cEEEEEEcCCCceEEEEEEecCCCCc
Confidence 33 34558999999997 46777777653 89999998765 45667889999
Q ss_pred eEEEEEcCCC---CEEEEEeCCC-EEEEEcCCCc------e-----ecceeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108 254 VFCVKFSPTG---QAWVAATTEG-VHIYSLDSGY------V-----FDPFLLDISITPQSVKEALADKDYAKALMMSLKL 318 (703)
Q Consensus 254 V~~l~~spdg---~~l~s~s~Dg-v~iwd~~~~~------~-----~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l 318 (703)
|.+++|+|++ ++|++++.|+ |++|++++.. . +.....+++|+|++ ..|++++.|+.+++ |+.
T Consensus 207 V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~las~~~D~~v~l-w~~ 283 (297)
T 2pm7_B 207 VRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTL-WKE 283 (297)
T ss_dssp EEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS--CCEEEEETTSCEEE-EEE
T ss_pred eEEEEECCCCCCceEEEEEECCCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCC--CEEEEEcCCCcEEE-EEE
Confidence 9999999995 7899999999 9999987642 1 12334679999999 88999999999998 987
Q ss_pred C
Q psy7108 319 N 319 (703)
Q Consensus 319 ~ 319 (703)
+
T Consensus 284 ~ 284 (297)
T 2pm7_B 284 N 284 (297)
T ss_dssp C
T ss_pred C
Confidence 5
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.5e-29 Score=266.77 Aligned_cols=251 Identities=13% Similarity=0.190 Sum_probs=190.9
Q ss_pred ceeeccCC---Cccccccc-cC-CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-------ceeEEEecCCCcEE
Q psy7108 28 VKKGDMAA---RVLKPEVL-SG-HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-------DTQHETIQLLSDAL 95 (703)
Q Consensus 28 v~~~d~tg---~~~~~~~l-~g-H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-------~~~~~~~~~~~~V~ 95 (703)
+++|+... +++ ..+ .+ |.+.|++++|+| ++++|++|+.|++|++||+... .....+..|.+.|.
T Consensus 36 i~lw~~~~~~~~~~--~~~~~~~h~~~v~~v~~sp--~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~ 111 (330)
T 2hes_X 36 IKLVSVKYDDFTLI--DVLDETAHKKAIRSVAWRP--HTSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVK 111 (330)
T ss_dssp EEEEECSSSCCEEE--EEECTTCCCSCEEEEEECT--TSSEEEEEETTSCEEEEEC-------CCCEEEEEEC----CEE
T ss_pred EEEEEecCCCeEEE--EEEecCCccCCEEEEEECC--CCCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEE
Confidence 55565432 333 455 44 999999999999 9999999999999999998532 23345567999999
Q ss_pred EEEEecCCCEEEEEECCCeEEEEEcCCC----cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108 96 CVAYKPDGTEIVVATLDGQLIMFDVESA----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA 171 (703)
Q Consensus 96 ~v~~spdg~~las~s~dg~I~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~ 171 (703)
+++|+|+|++|++|+.|++|++||++.. +.+..+.+|.. .|.+++|+|++++|+++
T Consensus 112 ~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--------------------~v~~v~~~p~~~~l~s~ 171 (330)
T 2hes_X 112 GVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQEHSQ--------------------DVKHVIWHPSEALLASS 171 (330)
T ss_dssp EEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEECCCSS--------------------CEEEEEECSSSSEEEEE
T ss_pred EEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEeccCCC--------------------ceEEEEECCCCCEEEEE
Confidence 9999999999999999999999999532 45566666654 89999999999999999
Q ss_pred ecCCcEEEEECCCC--ceEEEEEeccCCccccccccceeeeeccC--CCEEEEEcccCCCCCeeEEECCCCCCC------
Q psy7108 172 GQSKYICIYSSREG--ILLKKFTITQNKSLDGINDFINRRKMTEF--GNVSLIETRETHEGGNVVLKLPGVKKG------ 241 (703)
Q Consensus 172 s~dg~I~lwD~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spd--g~~l~~~~~~~~~~~~~~i~iwd~~~~------ 241 (703)
+.|++|++||..++ +++..+.+ |...|.+++|+|+ +..+++++.++ .|++||+.++
T Consensus 172 s~D~~i~iW~~~~~~~~~~~~~~~--------h~~~v~~~~~~~~~~~~~l~s~s~D~------~v~iw~~~~~~~~~~~ 237 (330)
T 2hes_X 172 SYDDTVRIWKDYDDDWECVAVLNG--------HEGTVWSSDFDKTEGVFRLCSGSDDS------TVRVWKYMGDDEDDQQ 237 (330)
T ss_dssp ETTSCEEEEEEETTEEEEEEEECC--------CSSCEEEEEECCSSSSCEEEEEETTS------CEEEEEEEEECTTSCE
T ss_pred cCCCeEEEEECCCCCeeEEEEccC--------CCCcEEEEEecCCCCeeEEEEEeCCC------eEEEEEecCCCccccc
Confidence 99999999999876 45555544 4458999999999 56677766653 8999998765
Q ss_pred --ccceeecC-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc--ee-------cc-eeeeEEEcc--chhhhHhhc
Q psy7108 242 --DMAARVLK-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY--VF-------DP-FLLDISITP--QSVKEALAD 305 (703)
Q Consensus 242 --~~~~~~~~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~--~~-------~~-~~~~~~~sp--d~~~~~l~s 305 (703)
.+...+.. |...|.+++|++++ .|++++.|| |++|+..+++ .. .. ....++|+| ++ .+|++
T Consensus 238 ~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~h~~~~v~~v~~~~~~~~--~~las 314 (330)
T 2hes_X 238 EWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDGEWKVFAKRALCHGVYEINVVKWLELNGK--TILAT 314 (330)
T ss_dssp EEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETTEEEEEEEESCTTTTSCEEEEEEC-------CCEEE
T ss_pred eeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCCceEEEeccccccccceEEEEEEecCCCc--eEEEE
Confidence 23333444 88999999999765 799999999 9999988763 11 11 346788999 56 78999
Q ss_pred CCcceEEEEEEecCc
Q psy7108 306 KDYAKALMMSLKLNE 320 (703)
Q Consensus 306 g~~~~~l~la~~l~~ 320 (703)
++.|+.+++ |++..
T Consensus 315 ~s~Dg~v~~-W~~~~ 328 (330)
T 2hes_X 315 GGDDGIVNF-WSLEK 328 (330)
T ss_dssp EETTSEEEE-EEC--
T ss_pred ecCCCcEEE-EEecc
Confidence 999999999 98764
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=7.9e-30 Score=270.73 Aligned_cols=247 Identities=16% Similarity=0.225 Sum_probs=203.1
Q ss_pred CccccccccCCCc-CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE--E-ecCCCcEEEEEEecCCCEEEEEEC
Q psy7108 36 RVLKPEVLSGHEG-PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE--T-IQLLSDALCVAYKPDGTEIVVATL 111 (703)
Q Consensus 36 ~~~~~~~l~gH~~-~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~--~-~~~~~~V~~v~~spdg~~las~s~ 111 (703)
+++ .++.+|.+ .|.+++|+| +|++||+|+.|++|+|||+.++..... . ..|...|.+++|+|+|++|++|+.
T Consensus 6 ~~~--~~~~~h~~~~v~~l~~sp--~g~~las~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLL--GRVPAHPDSRCWFLAWNP--AGTLLASCGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEE--EEECCSTTSCEEEEEECT--TSSCEEEEETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEe--eeecCCCCCcEEEEEECC--CCCEEEEEcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 455 78889988 999999999 999999999999999999987753322 2 358999999999999999999999
Q ss_pred CCeEEEEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEE
Q psy7108 112 DGQLIMFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLK 189 (703)
Q Consensus 112 dg~I~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~ 189 (703)
|++|++||++++. .+..+.+|.. .|.+++|+|++++|++|+.|++|++||++++....
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~--------------------~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~ 141 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHEN--------------------EVKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYE 141 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEEECTTSCEE
T ss_pred CCcEEEEEccCCCeEEEEEccCCCC--------------------CceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeE
Confidence 9999999998764 4566766654 89999999999999999999999999998764332
Q ss_pred EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccceEEEEEcCCCCEEE
Q psy7108 190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
... .+.+|...|.+++|+|+++.+++++.++ .|++||.++++ +...+.+|...|++++|+|+|++|+
T Consensus 142 ~~~-----~~~~h~~~v~~~~~~p~~~~l~s~s~d~------~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~ 210 (345)
T 3fm0_A 142 CVS-----VLNSHTQDVKHVVWHPSQELLASASYDD------TVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLA 210 (345)
T ss_dssp EEE-----EECCCCSCEEEEEECSSSSCEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEE-----EecCcCCCeEEEEECCCCCEEEEEeCCC------cEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEE
Confidence 221 1223555899999999999999888764 89999988774 4467789999999999999999999
Q ss_pred EEeCCC-EEEEEcCCCce----------------------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 268 AATTEG-VHIYSLDSGYV----------------------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~----------------------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
+++.|+ |++|+...... +.....+++|+|++ ..+++++.++.+++ |..+.
T Consensus 211 s~s~D~~v~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~~--~~l~s~~~d~~i~v-w~~~~ 283 (345)
T 3fm0_A 211 SCSDDRTVRIWRQYLPGNEQGVACSGSDPSWKCICTLSGFHSRTIYDIAWCQLT--GALATACGDDAIRV-FQEDP 283 (345)
T ss_dssp EEETTSCEEEEEEECTTCTTCCCCC---CEEEEEEEECSSCSSCEEEEEECTTT--CCEEEEETTSCEEE-EEECT
T ss_pred EEeCCCeEEEeccccCCCCccceeeccCCccceeEEecCCCCCcEEEEEEecCC--CEEEEEeCCCeEEE-EEeCC
Confidence 999999 99999632211 12234678999998 78899999999998 87653
No 24
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.97 E-value=5.5e-30 Score=275.71 Aligned_cols=267 Identities=17% Similarity=0.229 Sum_probs=214.1
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG 113 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg 113 (703)
+..+. ++|.+|.++|++++|+| ++++|+||+.||+|++||+.+++....+..|...|.+++|+|+|++|++|+.|+
T Consensus 55 ~~~~~--~~l~gH~~~V~~~~~sp--~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~ 130 (380)
T 3iz6_a 55 DLVCC--RTLQGHSGKVYSLDWTP--EKNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDS 130 (380)
T ss_dssp CCEEE--EEECCCSSCEEEEEECT--TSSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSS
T ss_pred eeEEe--ecccccccEEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 44556 88999999999999999 999999999999999999999888888888999999999999999999999999
Q ss_pred eEEEEEcCCCc-------EEEEEeccccCCCCC--------------CCCc--cc------------hhhcccCCccEEE
Q psy7108 114 QLIMFDVESAA-------QVGSVEARRDLDSGR--------------LDTD--LV------------TREQSLKAKAVST 158 (703)
Q Consensus 114 ~I~vwd~~~~~-------~~~~~~~~~~~~~~~--------------~~~~--~~------------~~~~~~~~~~V~~ 158 (703)
.|++||+.+.. ....+.+|....... .... .+ ......|...|.+
T Consensus 131 ~v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~ 210 (380)
T 3iz6_a 131 ACSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLS 210 (380)
T ss_dssp CCEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEE
T ss_pred cEEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEE
Confidence 99999986532 123344443321100 0000 00 0011457788999
Q ss_pred EEEcC-CCCEEEEEecCCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108 159 VCYSA-DGSCILAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP 236 (703)
Q Consensus 159 i~~sp-dg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw 236 (703)
++|+| +++++++|+.|++|++||++. +..+..+.+ |...|.+++|+|+++.+++++.++ .|++|
T Consensus 211 ~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~l~s~s~D~------~i~lw 276 (380)
T 3iz6_a 211 LSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHG--------HEGDINSVKFFPDGQRFGTGSDDG------TCRLF 276 (380)
T ss_dssp EEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECC--------CSSCCCEEEECTTSSEEEEECSSS------CEEEE
T ss_pred EEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECC--------cCCCeEEEEEecCCCeEEEEcCCC------eEEEE
Confidence 99987 889999999999999999984 466666654 445899999999999999888764 89999
Q ss_pred CCCCCccceeecCCc-------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc----------eeeeEEEccch
Q psy7108 237 GVKKGDMAARVLKPE-------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP----------FLLDISITPQS 298 (703)
Q Consensus 237 d~~~~~~~~~~~~h~-------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~----------~~~~~~~spd~ 298 (703)
|+++++.+..+..+. ..|.+++|+|+|++|++|+.|| |++||+.+++.... .+.+++|+|++
T Consensus 277 d~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg 356 (380)
T 3iz6_a 277 DMRTGHQLQVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDG 356 (380)
T ss_dssp ETTTTEEEEEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSS
T ss_pred ECCCCcEEEEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCC
Confidence 999998776665432 2489999999999999999999 99999987765432 24679999999
Q ss_pred hhhHhhcCCcceEEEEEEecCch
Q psy7108 299 VKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 299 ~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
..+++++.|+.+++ |++...
T Consensus 357 --~~l~sgs~D~~i~i-W~~~~~ 376 (380)
T 3iz6_a 357 --SALCTGSWDKNLKI-WAFSGH 376 (380)
T ss_dssp --SEEEEECTTSCEEE-EECCSS
T ss_pred --CEEEEeeCCCCEEE-EecCCC
Confidence 88999999999999 988753
No 25
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=3.9e-29 Score=286.41 Aligned_cols=266 Identities=18% Similarity=0.223 Sum_probs=214.4
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+.+|| ++++. ..+.+|.+.|++++|+| ++. .|++|+.|++|++||..+++....+..|...|.+++|+|||++|
T Consensus 131 v~~wd-~~~~~--~~l~gh~~~v~~v~f~p--~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~l 205 (611)
T 1nr0_A 131 VFLFD-TGTSN--GNLTGQARAMNSVDFKP--SRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 205 (611)
T ss_dssp EEETT-TCCBC--BCCCCCSSCEEEEEECS--SSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEE
T ss_pred EEEee-CCCCc--ceecCCCCCceEEEECC--CCCeEEEEEeCCCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEE
Confidence 44566 56777 88999999999999999 876 69999999999999998876667777899999999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++++.|++|++||+.+++....+.... .....|.+.|.+++|+|+|++|++++.|++|++||+++++
T Consensus 206 as~s~D~~i~lwd~~~g~~~~~~~~~~-------------~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~ 272 (611)
T 1nr0_A 206 ASTGGDGTIVLYNGVDGTKTGVFEDDS-------------LKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLK 272 (611)
T ss_dssp EEEETTSCEEEEETTTCCEEEECBCTT-------------SSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEECCCcEEEEECCCCcEeeeecccc-------------ccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCc
Confidence 999999999999999998887764210 0112356699999999999999999999999999999998
Q ss_pred eEEEEEeccC-----------------------------------CccccccccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108 187 LLKKFTITQN-----------------------------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNV 231 (703)
Q Consensus 187 ~~~~~~~~~~-----------------------------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 231 (703)
++.++..+.. ..+.+|...|.+++|+|+|+.+++++.++
T Consensus 273 ~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~~gh~~~v~~l~~spdg~~l~s~s~D~------ 346 (611)
T 1nr0_A 273 VEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVRYGHNKAITALSSSADGKTLFSADAEG------ 346 (611)
T ss_dssp EEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTS------
T ss_pred eeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEEcCCCCCEEEEEEeCCCCEEEEEeCCC------
Confidence 8877653211 12346788999999999999999888764
Q ss_pred EEECCCCCCCccceee-c--------------------------------------------------------------
Q psy7108 232 VLKLPGVKKGDMAARV-L-------------------------------------------------------------- 248 (703)
Q Consensus 232 ~i~iwd~~~~~~~~~~-~-------------------------------------------------------------- 248 (703)
.|++||+.+++....+ .
T Consensus 347 ~v~~Wd~~~~~~~~~~~~~h~~~v~~~~~s~~~~l~s~s~d~~v~~w~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~ 426 (611)
T 1nr0_A 347 HINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIA 426 (611)
T ss_dssp CEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEEEEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCE
T ss_pred cEEEEECCCCceeeecccCCcceEEEEEECCCCcEEEEEcCCceEEeecCCccccccceeeeecCCCCcEEEEeCCCcEE
Confidence 7888887665432211 0
Q ss_pred -------------------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce-------ecceeeeEEEccchhhh
Q psy7108 249 -------------------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV-------FDPFLLDISITPQSVKE 301 (703)
Q Consensus 249 -------------------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~-------~~~~~~~~~~spd~~~~ 301 (703)
.|...+.+++|+|||++|++|+.|+ |++|++.++.. +.....+++|+|++ .
T Consensus 427 ~~~~~~~v~~~~~~~~~~~~~~~~v~~va~spdg~~lasgs~D~~v~lwd~~~~~~~~~~~~~h~~~v~~v~fspdg--~ 504 (611)
T 1nr0_A 427 VAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNG--A 504 (611)
T ss_dssp EEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTS--S
T ss_pred EEEeCceEEEEeCCceeeeecCCCceEEEEeCCCCEEEEeCCCCeEEEEEccCCceeeeeccCCCCceEEEEECCCC--C
Confidence 1223467899999999999999999 99999987643 22335779999999 8
Q ss_pred HhhcCCcceEEEEEEecCc
Q psy7108 302 ALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 302 ~l~sg~~~~~l~la~~l~~ 320 (703)
++++++.++.+++ |++..
T Consensus 505 ~las~s~d~~v~~-w~~~~ 522 (611)
T 1nr0_A 505 FLVATDQSRKVIP-YSVAN 522 (611)
T ss_dssp EEEEEETTSCEEE-EEGGG
T ss_pred EEEEEcCCCCEEE-EEcCC
Confidence 8999999999998 88653
No 26
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.97 E-value=2.2e-29 Score=288.39 Aligned_cols=251 Identities=14% Similarity=0.232 Sum_probs=210.0
Q ss_pred ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEEEEEEecCCC
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~ 104 (703)
+.+|+. +++.. .++.+|.+.|++++|+| +|++||||+.||+|+|||+.+++. ......|.+.|.+++|+|||+
T Consensus 41 v~l~~~~~~~~~--~~~~~h~~~v~~~~~sp--dg~~lasg~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~ 116 (611)
T 1nr0_A 41 VYTVPVGSLTDT--EIYTEHSHQTTVAKTSP--SGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESK 116 (611)
T ss_dssp EEEEETTCSSCC--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSC
T ss_pred EEEecCCCcccC--eEecCCCCceEEEEECC--CCcEEEEEeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCCCC
Confidence 455663 57777 89999999999999999 999999999999999999975432 345567999999999999999
Q ss_pred EEEEEECC----CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEE
Q psy7108 105 EIVVATLD----GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICI 179 (703)
Q Consensus 105 ~las~s~d----g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~l 179 (703)
.|++++.+ +.|++|| +++....+.+|. +.|++++|+|++. .|++|+.|++|++
T Consensus 117 ~l~~~~~~~~~~~~v~~wd--~~~~~~~l~gh~--------------------~~v~~v~f~p~~~~~l~s~s~D~~v~l 174 (611)
T 1nr0_A 117 RIAAVGEGRERFGHVFLFD--TGTSNGNLTGQA--------------------RAMNSVDFKPSRPFRIISGSDDNTVAI 174 (611)
T ss_dssp EEEEEECCSSCSEEEEETT--TCCBCBCCCCCS--------------------SCEEEEEECSSSSCEEEEEETTSCEEE
T ss_pred EEEEEECCCCceeEEEEee--CCCCcceecCCC--------------------CCceEEEECCCCCeEEEEEeCCCeEEE
Confidence 99998875 3688887 455444555554 4899999999987 5999999999999
Q ss_pred EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------CCcc
Q psy7108 180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------KPEV 252 (703)
Q Consensus 180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------~h~~ 252 (703)
||.+++++..++..| ...|.+++|+|+|+.+++++.++ .|++||..+++....+. +|..
T Consensus 175 wd~~~~~~~~~l~~H--------~~~V~~v~fspdg~~las~s~D~------~i~lwd~~~g~~~~~~~~~~~~~~~h~~ 240 (611)
T 1nr0_A 175 FEGPPFKFKSTFGEH--------TKFVHSVRYNPDGSLFASTGGDG------TIVLYNGVDGTKTGVFEDDSLKNVAHSG 240 (611)
T ss_dssp EETTTBEEEEEECCC--------SSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCEEEECBCTTSSSCSSSS
T ss_pred EECCCCeEeeeeccc--------cCceEEEEECCCCCEEEEEECCC------cEEEEECCCCcEeeeeccccccccccCC
Confidence 999988887776544 45899999999999999888764 89999999988776663 7999
Q ss_pred ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc--------------------------------------------
Q psy7108 253 RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-------------------------------------------- 287 (703)
Q Consensus 253 ~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-------------------------------------------- 287 (703)
.|.+++|+|+|++|++++.|+ |++||+.+++....
T Consensus 241 ~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~i~~~~~~~~~~~~~~ 320 (611)
T 1nr0_A 241 SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISANGFINFVNPELGSIDQVR 320 (611)
T ss_dssp CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETTCCEEEEETTTTEEEEEE
T ss_pred CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeeecCCCCccceeEEEEEcCCEEEEEeCCCcEEEEeCCCCCcceEE
Confidence 999999999999999999999 99999988764321
Q ss_pred -----eeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 288 -----FLLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 288 -----~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
...+++|+|++ ..+++++.|+.+++ |++...
T Consensus 321 ~gh~~~v~~l~~spdg--~~l~s~s~D~~v~~-Wd~~~~ 356 (611)
T 1nr0_A 321 YGHNKAITALSSSADG--KTLFSADAEGHINS-WDISTG 356 (611)
T ss_dssp CCCSSCEEEEEECTTS--SEEEEEETTSCEEE-EETTTC
T ss_pred cCCCCCEEEEEEeCCC--CEEEEEeCCCcEEE-EECCCC
Confidence 12468899999 88999999999998 988653
No 27
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.97 E-value=3.5e-29 Score=291.26 Aligned_cols=243 Identities=18% Similarity=0.263 Sum_probs=206.5
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+.+.+|...|++++|+| ++++|+||+.||+|++||+.++.....+..|...|.+++|+|+++.|++|+.|++|++||.
T Consensus 424 ~~~~~h~~~v~~v~~s~--~g~~l~sgs~Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~ 501 (694)
T 3dm0_A 424 RRLTGHSHFVEDVVLSS--DGQFALSGSWDGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNT 501 (694)
T ss_dssp EEEECCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred ceecCCCCcEEEEEECC--CCCEEEEEeCCCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEEC
Confidence 67899999999999999 9999999999999999999998888888889999999999999999999999999999998
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC--CEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG--SCILAAGQSKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg--~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
........... ...|...|.+++|+|++ ..+++++.|++|++||++++++...+..|.
T Consensus 502 ~~~~~~~~~~~-----------------~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~--- 561 (694)
T 3dm0_A 502 LGECKYTISEG-----------------GEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHT--- 561 (694)
T ss_dssp TSCEEEEECSS-----------------TTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCS---
T ss_pred CCCcceeeccC-----------------CCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCC---
Confidence 65543322211 12355689999999987 689999999999999999998887776544
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEE
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS 278 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd 278 (703)
..|.+++|+|+|+.+++++.++ .|++||+++++.+..+.. ...|.+++|+|++.++++++.++|++||
T Consensus 562 -----~~v~~v~~spdg~~l~sg~~Dg------~i~iwd~~~~~~~~~~~~-~~~v~~~~~sp~~~~l~~~~~~~i~iwd 629 (694)
T 3dm0_A 562 -----GYVSTVAVSPDGSLCASGGKDG------VVLLWDLAEGKKLYSLEA-NSVIHALCFSPNRYWLCAATEHGIKIWD 629 (694)
T ss_dssp -----SCEEEEEECTTSSEEEEEETTS------BCEEEETTTTEEEECCBC-SSCEEEEEECSSSSEEEEEETTEEEEEE
T ss_pred -----CCEEEEEEeCCCCEEEEEeCCC------eEEEEECCCCceEEEecC-CCcEEEEEEcCCCcEEEEEcCCCEEEEE
Confidence 4899999999999999888764 899999999987766554 4679999999999988888766699999
Q ss_pred cCCCceecce-------------------------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 279 LDSGYVFDPF-------------------------LLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 279 ~~~~~~~~~~-------------------------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
+.++.....+ ..+++|+|++ ..|++++.|+.+++ |++.+
T Consensus 630 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~spdg--~~l~sgs~Dg~i~i-W~i~~ 693 (694)
T 3dm0_A 630 LESKSIVEDLKVDLKAEAEKADNSGPAATKRKVIYCTSLNWSADG--STLFSGYTDGVIRV-WGIGR 693 (694)
T ss_dssp TTTTEEEEEECCCCC----------------CCCCEEEEEECTTS--SEEEEEETTSEEEE-EEC--
T ss_pred CCCCCChhhhccccccccccccccccccCCceeEEeeeEEEcCCC--CEEEEEcCCCeEEE-EeccC
Confidence 9988764332 2468899999 89999999999999 98763
No 28
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.97 E-value=1.4e-28 Score=260.70 Aligned_cols=242 Identities=17% Similarity=0.192 Sum_probs=198.2
Q ss_pred ccccCCCcCeEEEEE-----cCCCCCCEEEEEeCCCcEEEEEcCCCc-------eeEEEecCCCcEEEEEEecCCCEEEE
Q psy7108 41 EVLSGHEGPVSCIEF-----SPVLSSTGMVSASWDKTVKLWNAVETD-------TQHETIQLLSDALCVAYKPDGTEIVV 108 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~-----sp~~dg~~L~sgs~Dg~V~iWd~~~~~-------~~~~~~~~~~~V~~v~~spdg~~las 108 (703)
.+|.||.+.|++++| ++. ++++|+||+.|++|++||+.+.+ ....+..|...|.+++|+|++.++++
T Consensus 15 ~~l~gH~~~V~~~~~~~s~~~~~-d~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~~~~l~s 93 (343)
T 2xzm_R 15 GILEGHSDWVTSIVAGFSQKENE-DSPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQENCFAIS 93 (343)
T ss_dssp EEEECCSSCEEEEEECCCSSTTC-CCCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSSTTEEEE
T ss_pred eeeccchhhhhheeeEEEeecCC-CCCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCCCCEEEE
Confidence 788999999999999 543 78999999999999999997542 23455679999999999999999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE
Q psy7108 109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL 188 (703)
Q Consensus 109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~ 188 (703)
|+.|++|++||+++++.+..+.+|.. .|.+++|+|++++|++++.|++|++||+... ..
T Consensus 94 ~s~D~~v~lwd~~~~~~~~~~~~h~~--------------------~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~-~~ 152 (343)
T 2xzm_R 94 SSWDKTLRLWDLRTGTTYKRFVGHQS--------------------EVYSVAFSPDNRQILSAGAEREIKLWNILGE-CK 152 (343)
T ss_dssp EETTSEEEEEETTSSCEEEEEECCCS--------------------CEEEEEECSSTTEEEEEETTSCEEEEESSSC-EE
T ss_pred EcCCCcEEEEECCCCcEEEEEcCCCC--------------------cEEEEEECCCCCEEEEEcCCCEEEEEeccCC-ce
Confidence 99999999999999999999988765 8999999999999999999999999999843 32
Q ss_pred EEEEeccCCccccccccceeeeeccCC----------CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108 189 KKFTITQNKSLDGINDFINRRKMTEFG----------NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK 258 (703)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~spdg----------~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~ 258 (703)
.... ...++...+.+++|+|++ .++++++.++ .|++|| .+.+....+.+|...|.+++
T Consensus 153 ~~~~-----~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~------~i~iwd-~~~~~~~~~~~h~~~v~~~~ 220 (343)
T 2xzm_R 153 FSSA-----EKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDG------RLKVWN-TNFQIRYTFKAHESNVNHLS 220 (343)
T ss_dssp EECC-----TTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTS------EEEEEE-TTTEEEEEEECCSSCEEEEE
T ss_pred eeee-----cccCCCceeeeeeeccccccccccCCCCCEEEEEcCCC------EEEEEc-CCCceeEEEcCccccceEEE
Confidence 2221 123466689999999987 5677766653 899999 44566667889999999999
Q ss_pred EcCCCCEEEEEeCCC-EEEEEcCCC-ceec-----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 259 FSPTGQAWVAATTEG-VHIYSLDSG-YVFD-----PFLLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 259 ~spdg~~l~s~s~Dg-v~iwd~~~~-~~~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
|+|+|++|++++.|+ |++||+... .... ....+++|+|++ .+++.+ .++.+++ |++..
T Consensus 221 ~s~~g~~l~sgs~dg~v~iwd~~~~~~~~~~~~~~~~v~~v~~sp~~--~~la~~-~d~~v~i-w~~~~ 285 (343)
T 2xzm_R 221 ISPNGKYIATGGKDKKLLIWDILNLTYPQREFDAGSTINQIAFNPKL--QWVAVG-TDQGVKI-FNLMT 285 (343)
T ss_dssp ECTTSSEEEEEETTCEEEEEESSCCSSCSEEEECSSCEEEEEECSSS--CEEEEE-ESSCEEE-EESSS
T ss_pred ECCCCCEEEEEcCCCeEEEEECCCCcccceeecCCCcEEEEEECCCC--CEEEEE-CCCCEEE-EEeCC
Confidence 999999999999999 999998433 2222 224679999998 566544 5677887 88754
No 29
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.97 E-value=1.1e-28 Score=260.24 Aligned_cols=241 Identities=13% Similarity=0.167 Sum_probs=194.1
Q ss_pred CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEe--c-CCCcEEEEEEecCCCEEEEEE
Q psy7108 35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETI--Q-LLSDALCVAYKPDGTEIVVAT 110 (703)
Q Consensus 35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~--~-~~~~V~~v~~spdg~~las~s 110 (703)
.+++ +++.+|.++|++++|+| + +|++|+.|++|++||+..+. ...... . |...|.+++|+|++++|++|+
T Consensus 4 ~~~~--~~~~~h~~~v~~~~~s~--~--~las~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~las~s 77 (330)
T 2hes_X 4 INLI--KSLKLYKEKIWSFDFSQ--G--ILATGSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPHTSLLAAGS 77 (330)
T ss_dssp CEEE--EEEECCSSCEEEEEEET--T--EEEEEESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTTSSEEEEEE
T ss_pred cccc--eeeccCCCceeeeccCC--C--EEEEEcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCCCCEEEEEe
Confidence 3455 78899999999999999 6 99999999999999998653 233332 3 889999999999999999999
Q ss_pred CCCeEEEEEcCC-------CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108 111 LDGQLIMFDVES-------AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 111 ~dg~I~vwd~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~ 183 (703)
.|++|++||++. .+.+..+.+|.. .|.+++|+|++++|++|+.|++|++||++
T Consensus 78 ~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~--------------------~V~~v~~sp~g~~las~s~D~~v~iwd~~ 137 (330)
T 2hes_X 78 FDSTVSIWAKEESADRTFEMDLLAIIEGHEN--------------------EVKGVAWSNDGYYLATCSRDKSVWIWETD 137 (330)
T ss_dssp TTSCEEEEEC-------CCCEEEEEEC------------------------CEEEEEECTTSCEEEEEETTSCEEEEECC
T ss_pred CCCcEEEEEcccCcCccccceeEEEEcCCCC--------------------cEEEEEECCCCCEEEEEeCCCEEEEEecc
Confidence 999999999853 234555555544 89999999999999999999999999995
Q ss_pred CC----ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccceEEE
Q psy7108 184 EG----ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRVFCV 257 (703)
Q Consensus 184 ~~----~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V~~l 257 (703)
.. +++..+.. |...|.+++|+|++..+++++.++ .|++||..++ +++..+.+|...|.++
T Consensus 138 ~~~~~~~~~~~~~~--------h~~~v~~v~~~p~~~~l~s~s~D~------~i~iW~~~~~~~~~~~~~~~h~~~v~~~ 203 (330)
T 2hes_X 138 ESGEEYECISVLQE--------HSQDVKHVIWHPSEALLASSSYDD------TVRIWKDYDDDWECVAVLNGHEGTVWSS 203 (330)
T ss_dssp TTCCCCEEEEEECC--------CSSCEEEEEECSSSSEEEEEETTS------CEEEEEEETTEEEEEEEECCCSSCEEEE
T ss_pred CCCCCeEEEEEecc--------CCCceEEEEECCCCCEEEEEcCCC------eEEEEECCCCCeeEEEEccCCCCcEEEE
Confidence 32 34445443 445899999999999999888764 8999998766 5677888999999999
Q ss_pred EEcCC--CCEEEEEeCCC-EEEEEcCCCc--------e-------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 258 KFSPT--GQAWVAATTEG-VHIYSLDSGY--------V-------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 258 ~~spd--g~~l~s~s~Dg-v~iwd~~~~~--------~-------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
+|+|+ +..|++++.|+ |++|++.++. . +.....+++|++++ .+++++.|+.+++ |+..
T Consensus 204 ~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~---~l~s~~~dg~v~i-w~~~ 279 (330)
T 2hes_X 204 DFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG---LIASVGADGVLAV-YEEV 279 (330)
T ss_dssp EECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCSSCEEEEEECTTS---CEEEEETTSCEEE-EEEE
T ss_pred EecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccccceEEEEEcCCC---EEEEEeCCCEEEE-EEcC
Confidence 99999 67899999999 9999986541 1 22335678898765 6788899999998 8764
No 30
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.97 E-value=2.1e-29 Score=263.94 Aligned_cols=243 Identities=14% Similarity=0.152 Sum_probs=192.6
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce--eEEEecCCCcEEEEEEec--CCCEEEEEECCCeEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT--QHETIQLLSDALCVAYKP--DGTEIVVATLDGQLI 116 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~sp--dg~~las~s~dg~I~ 116 (703)
.++.+|.++|++++|+| +|++|+||+.|++|++||+.++.. ...+..|.+.|.+++|+| ++++|++|+.|++|+
T Consensus 7 ~~~~~H~~~V~~v~~s~--~g~~lasgs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~ 84 (316)
T 3bg1_A 7 TVDTSHEDMIHDAQMDY--YGTRLATCSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVI 84 (316)
T ss_dssp -------CCEEEEEECG--GGCEEEEEETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEE
T ss_pred eecccccCeEEEeeEcC--CCCEEEEEeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEE
Confidence 45689999999999999 999999999999999999987642 345667999999999986 489999999999999
Q ss_pred EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108 117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGILLKKFT 192 (703)
Q Consensus 117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~~~~~~ 192 (703)
+||+++++ ....+.+|.. .|.+++|+|+ +.+|++|+.|++|++||++++......
T Consensus 85 iWd~~~~~~~~~~~~~~h~~--------------------~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~- 143 (316)
T 3bg1_A 85 IWREENGTWEKSHEHAGHDS--------------------SVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVK- 143 (316)
T ss_dssp EECCSSSCCCEEEEECCCSS--------------------CCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEEC-
T ss_pred EEECCCCcceEEEEccCCCC--------------------ceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCccee-
Confidence 99998873 4555656544 8999999998 789999999999999999876322111
Q ss_pred eccCCccccccccceeeeeccCC-----------------CEEEEEcccCCCCCeeEEECCCCCCC---ccceeecCCcc
Q psy7108 193 ITQNKSLDGINDFINRRKMTEFG-----------------NVSLIETRETHEGGNVVLKLPGVKKG---DMAARVLKPEV 252 (703)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~spdg-----------------~~l~~~~~~~~~~~~~~i~iwd~~~~---~~~~~~~~h~~ 252 (703)
....+|...+.+++|+|++ +.+++++.+ ..|++||++.. ++...+.+|..
T Consensus 144 ----~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D------~~v~lWd~~~~~~~~~~~~l~~h~~ 213 (316)
T 3bg1_A 144 ----KINNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCD------NLIKLWKEEEDGQWKEEQKLEAHSD 213 (316)
T ss_dssp ----CBTTSSSSCBCCCEECCCCCC------CCSCCCCCCCBEECCBTT------SBCCEEEECTTSCEEEEECCBCCSS
T ss_pred ----eeeccccCCcceEEEccccCCccccccccccCccccceEEEecCC------CeEEEEEeCCCCccceeeecccCCC
Confidence 1234566688999999983 566665554 38999998754 35667788999
Q ss_pred ceEEEEEcCCC----CEEEEEeCCC-EEEEEcCCC-------ce---ecceeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 253 RVFCVKFSPTG----QAWVAATTEG-VHIYSLDSG-------YV---FDPFLLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 253 ~V~~l~~spdg----~~l~s~s~Dg-v~iwd~~~~-------~~---~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
.|.+++|+|++ +.|++++.|+ |++|++.+. .. +.....+++|+|++ ..+++++.|+.+++ |+
T Consensus 214 ~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g--~~las~~~D~~v~l-w~ 290 (316)
T 3bg1_A 214 WVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFNDVVWHVSWSITA--NILAVSGGDNKVTL-WK 290 (316)
T ss_dssp CEEEEECCCCSSCSCCEEEEEETTCEEEEEECSSTTCCCCBCCEEEECSSCEEEEEECTTT--CCEEEEESSSCEEE-EE
T ss_pred ceEEEEecCCCCCCCceEEEEcCCCeEEEEEccCccccchhhhhhhcCCCcEEEEEEcCCC--CEEEEEcCCCeEEE-EE
Confidence 99999999987 7899999999 999998762 11 22335789999999 88999999999999 98
Q ss_pred cC
Q psy7108 318 LN 319 (703)
Q Consensus 318 l~ 319 (703)
..
T Consensus 291 ~~ 292 (316)
T 3bg1_A 291 ES 292 (316)
T ss_dssp EC
T ss_pred EC
Confidence 75
No 31
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.97 E-value=5e-28 Score=274.55 Aligned_cols=244 Identities=24% Similarity=0.371 Sum_probs=213.8
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 107 (703)
+++|+.+++.+ ..+.+|...|.+++|+| +++.|++|+.||.+++||. +++.......|...|.+++|+|||++|+
T Consensus 327 i~~w~~~~~~~--~~~~~~~~~v~~~~~s~--~g~~l~~~~~dg~v~~~~~-~~~~~~~~~~~~~~v~~~~~s~dg~~l~ 401 (577)
T 2ymu_A 327 VKLWNRNGQHL--QTLTGHSSSVWGVAFSP--DGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 401 (577)
T ss_dssp EEEEETTSCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEET-TCCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEEEeCCCCee--EEEeCCCCCEEEEEECC--CCCEEEEEeCCCEEEEEcC-CCCEEEEecCCCCCeEEEEECCCCCEEE
Confidence 77888888888 88999999999999999 9999999999999999996 4556777778999999999999999999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL 187 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~ 187 (703)
+++.|+.|++||. +++.+..+.+|.. .|++++|+||+++|++++.|+.|++||. +++.
T Consensus 402 ~~~~d~~v~~~~~-~~~~~~~~~~~~~--------------------~v~~~~~s~d~~~l~~~~~d~~v~~w~~-~~~~ 459 (577)
T 2ymu_A 402 SASDDKTVKLWNR-NGQLLQTLTGHSS--------------------SVWGVAFSPDDQTIASASDDKTVKLWNR-NGQL 459 (577)
T ss_dssp EEETTSEEEEECT-TCCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEET-TSCE
T ss_pred EEeCCCEEEEEeC-CCCEEEEecCCCC--------------------CeEEEEECCCCCEEEEEcCCCEEEEEEC-CCCE
Confidence 9999999999995 5677777777655 8999999999999999999999999996 4666
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
+..+..+. ..|.+++|+|+++.+++++.++ .|++||. +++++..+.+|...|++++|+|||++|+
T Consensus 460 ~~~~~~~~--------~~v~~~~~spd~~~las~~~d~------~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 524 (577)
T 2ymu_A 460 LQTLTGHS--------SSVRGVAFSPDGQTIASASDDK------TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 524 (577)
T ss_dssp EEEEECCS--------SCEEEEEECTTSCEEEEEETTS------EEEEEET-TSCEEEEEECCSSCEEEEEECTTSSCEE
T ss_pred EEEEcCCC--------CCEEEEEEcCCCCEEEEEeCCC------EEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCCCEEE
Confidence 66666544 4899999999999999887764 8999995 6788888999999999999999999999
Q ss_pred EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
+++.|+ |++||.. ++.+..+ +.+++|+||+ .+|++++.|+++++ |+
T Consensus 525 s~~~dg~v~lwd~~-~~~~~~~~~h~~~v~~~~fs~dg--~~l~s~~~D~~i~~-Wd 577 (577)
T 2ymu_A 525 SASDDKTVKLWNRN-GQLLQTLTGHSSSVWGVAFSPDG--QTIASASSDKTVKL-WN 577 (577)
T ss_dssp EEETTSEEEEECTT-SCEEEEEECCSSCEEEEEECTTS--SCEEEEETTSCEEE-EC
T ss_pred EEECcCEEEEEeCC-CCEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCEEEE-eC
Confidence 999999 9999964 5554433 4679999999 88999999999988 74
No 32
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.97 E-value=2.2e-28 Score=264.41 Aligned_cols=236 Identities=16% Similarity=0.286 Sum_probs=199.6
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC------------------CcEEEEEEecCCCEE
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL------------------SDALCVAYKPDGTEI 106 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~------------------~~V~~v~~spdg~~l 106 (703)
+|.+.|++++|+| +|++|++|+ |+++++|++.+++....+..+. ..|.+++|+|+|++|
T Consensus 62 ~h~~~V~~v~fsp--dg~~la~g~-~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l 138 (393)
T 1erj_A 62 DHTSVVCCVKFSN--DGEYLATGC-NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFL 138 (393)
T ss_dssp ECSSCCCEEEECT--TSSEEEEEC-BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEE
T ss_pred CCCCEEEEEEECC--CCCEEEEEc-CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEE
Confidence 6999999999999 999999987 6899999999887655544332 248999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++|+.|+.|++||+++++.+..+.+|.. .|.+++|+|+++.|++++.|++|++||+++++
T Consensus 139 ~s~~~d~~i~iwd~~~~~~~~~~~~h~~--------------------~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~ 198 (393)
T 1erj_A 139 ATGAEDRLIRIWDIENRKIVMILQGHEQ--------------------DIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 198 (393)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred EEEcCCCeEEEEECCCCcEEEEEccCCC--------------------CEEEEEEcCCCCEEEEecCCCcEEEEECCCCe
Confidence 9999999999999999999888888765 89999999999999999999999999999998
Q ss_pred eEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceee-------cCCccceEEEE
Q psy7108 187 LLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------LKPEVRVFCVK 258 (703)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------~~h~~~V~~l~ 258 (703)
+...+.. ...+.+++++| +++++++++.++ .|++||+++++.+..+ .+|...|.+++
T Consensus 199 ~~~~~~~---------~~~v~~~~~~~~~~~~l~~~s~d~------~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~ 263 (393)
T 1erj_A 199 CSLTLSI---------EDGVTTVAVSPGDGKYIAAGSLDR------AVRVWDSETGFLVERLDSENESGTGHKDSVYSVV 263 (393)
T ss_dssp EEEEEEC---------SSCEEEEEECSTTCCEEEEEETTS------CEEEEETTTCCEEEEEC------CCCSSCEEEEE
T ss_pred eEEEEEc---------CCCcEEEEEECCCCCEEEEEcCCC------cEEEEECCCCcEEEeecccccCCCCCCCCEEEEE
Confidence 8777652 23688999999 888888877664 8999999998876655 57889999999
Q ss_pred EcCCCCEEEEEeCCC-EEEEEcCCCce------------------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 259 FSPTGQAWVAATTEG-VHIYSLDSGYV------------------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 259 ~spdg~~l~s~s~Dg-v~iwd~~~~~~------------------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
|+|+|++|++++.|+ |++||+.+... +.....+++++|++ .++++++.|+.+.+ |++.
T Consensus 264 ~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~l~sgs~D~~v~i-wd~~ 340 (393)
T 1erj_A 264 FTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVLSVATTQND--EYILSGSKDRGVLF-WDKK 340 (393)
T ss_dssp ECTTSSEEEEEETTSEEEEEEC---------------CEEEEEECCSSCEEEEEECGGG--CEEEEEETTSEEEE-EETT
T ss_pred ECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEecccCcEEEEEECCCC--CEEEEEeCCCeEEE-EECC
Confidence 999999999999999 99999876422 12234678999999 88999999999998 9876
Q ss_pred ch
Q psy7108 320 EQ 321 (703)
Q Consensus 320 ~~ 321 (703)
..
T Consensus 341 ~~ 342 (393)
T 1erj_A 341 SG 342 (393)
T ss_dssp TC
T ss_pred CC
Confidence 54
No 33
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=1.1e-28 Score=263.14 Aligned_cols=207 Identities=13% Similarity=0.149 Sum_probs=175.1
Q ss_pred cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC-EEEEEECCCeEEEEEc
Q psy7108 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT-EIVVATLDGQLIMFDV 120 (703)
Q Consensus 42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~-~las~s~dg~I~vwd~ 120 (703)
...+|.+.|++++|+| ++++|++|+.|++|++||+.+++....+..|...|.+++|+|++. .+++++.|+.|++||+
T Consensus 134 ~~~~h~~~V~~v~~sp--dg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~ 211 (357)
T 4g56_B 134 AKYEHDDIVKTLSVFS--DGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDT 211 (357)
T ss_dssp EECCCSSCEEEEEECS--SSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCT
T ss_pred ccCCCCCCEEEEEECC--CCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEEC
Confidence 3458999999999999 999999999999999999999887777888999999999999985 7899999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREGILLKKFTITQNKSL 199 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~ 199 (703)
++++....+..+. +...+.+++|+|+ +.+|++|+.|+.|++||+++++++..+..+.
T Consensus 212 ~~~~~~~~~~~~~------------------~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~~~~---- 269 (357)
T 4g56_B 212 RKPKPATRIDFCA------------------SDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSAVHS---- 269 (357)
T ss_dssp TSSSCBCBCCCTT------------------CCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGCEEECCCS----
T ss_pred CCCceeeeeeecc------------------ccccccchhhhhcccceEEEeecccceeEEECCCCcEeEEEeccc----
Confidence 9887655443321 2347999999997 5688899999999999999999888876544
Q ss_pred ccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC-CCCEEEEEeCCC-EEE
Q psy7108 200 DGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP-TGQAWVAATTEG-VHI 276 (703)
Q Consensus 200 ~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp-dg~~l~s~s~Dg-v~i 276 (703)
..|++++|+|++. ++++++.+ +.|++||+++++.... .+|...|++++|+| ++++|++++.|+ |++
T Consensus 270 ----~~v~~l~~sp~~~~~lasgs~D------~~i~iwd~~~~~~~~~-~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~i 338 (357)
T 4g56_B 270 ----QNITGLAYSYHSSPFLASISED------CTVAVLDADFSEVFRD-LSHRDFVTGVAWSPLDHSKFTTVGWDHKVLH 338 (357)
T ss_dssp ----SCEEEEEECSSSSCCEEEEETT------SCEEEECTTSCEEEEE-CCCSSCEEEEEECSSSTTEEEEEETTSCEEE
T ss_pred ----eeEEEEEEcCCCCCEEEEEeCC------CEEEEEECCCCcEeEE-CCCCCCEEEEEEeCCCCCEEEEEcCCCeEEE
Confidence 4899999999986 45555554 3899999999887654 58999999999999 799999999999 999
Q ss_pred EEcCCCc
Q psy7108 277 YSLDSGY 283 (703)
Q Consensus 277 wd~~~~~ 283 (703)
|++.+..
T Consensus 339 W~~~~~~ 345 (357)
T 4g56_B 339 HHLPSEG 345 (357)
T ss_dssp EECC---
T ss_pred EECCCCC
Confidence 9997643
No 34
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.96 E-value=1.8e-27 Score=249.63 Aligned_cols=233 Identities=15% Similarity=0.241 Sum_probs=204.9
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~ 122 (703)
+|...|.+++|+| ++++|++++.||.|++||+.+++ .......|...|.+++|+|+++.+++++.|+.|++||+++
T Consensus 95 ~~~~~v~~~~~~~--~~~~l~~~~~d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 95 NRDNYIRSCKLLP--DGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CTTSBEEEEEECT--TSSEEEEEESSSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEEcC--CCCEEEEEcCCCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 7999999999999 99999999999999999998876 3455666889999999999999999999999999999999
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
++....+..|.. .+.+++|+|+++.|++++.|+.|++||+++++.+..+. +
T Consensus 173 ~~~~~~~~~~~~--------------------~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~---------~ 223 (337)
T 1gxr_A 173 QTLVRQFQGHTD--------------------GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHD---------F 223 (337)
T ss_dssp TEEEEEECCCSS--------------------CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEE---------C
T ss_pred CceeeeeecccC--------------------ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeec---------C
Confidence 998888877654 89999999999999999999999999999998877764 2
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
...+.+++|+|+++.+++++.++ .+++||+++++. .....|...|.+++|+|++++|++++.|| +++|++.+
T Consensus 224 ~~~v~~~~~s~~~~~l~~~~~~~------~i~~~~~~~~~~-~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~ 296 (337)
T 1gxr_A 224 TSQIFSLGYCPTGEWLAVGMESS------NVEVLHVNKPDK-YQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY 296 (337)
T ss_dssp SSCEEEEEECTTSSEEEEEETTS------CEEEEETTSSCE-EEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT
T ss_pred CCceEEEEECCCCCEEEEEcCCC------cEEEEECCCCCe-EEEcCCccceeEEEECCCCCEEEEecCCCcEEEEECCC
Confidence 33789999999999999887654 799999988765 45678999999999999999999999999 99999998
Q ss_pred Cceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108 282 GYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKL 318 (703)
Q Consensus 282 ~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l 318 (703)
++..... ..+++|+|++ ..+++++.++.+.+ |++
T Consensus 297 ~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~dg~i~i-w~~ 335 (337)
T 1gxr_A 297 GASIFQSKESSSVLSCDISVDD--KYIVTGSGDKKATV-YEV 335 (337)
T ss_dssp CCEEEEEECSSCEEEEEECTTS--CEEEEEETTSCEEE-EEE
T ss_pred CeEEEEecCCCcEEEEEECCCC--CEEEEecCCCeEEE-EEE
Confidence 8765322 3678999999 78889999999887 765
No 35
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.96 E-value=3.8e-27 Score=267.25 Aligned_cols=246 Identities=24% Similarity=0.367 Sum_probs=215.0
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 107 (703)
+++|+.+++++ ..+.+|.+.|.+++|+| ++..|++++.|++|++||.... .......|...|.+++|+|+++.++
T Consensus 286 i~~w~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~t~~~d~~i~~w~~~~~-~~~~~~~~~~~v~~~~~s~~g~~l~ 360 (577)
T 2ymu_A 286 VKLWNRNGQLL--QTLTGHSSSVWGVAFSP--DGQTIASASDDKTVKLWNRNGQ-HLQTLTGHSSSVWGVAFSPDGQTIA 360 (577)
T ss_dssp EEEEETTSCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTSC-EEEEECCCSSCEEEEEECTTSSEEE
T ss_pred EEEEeCCCcEE--EEEecCCCCeEEEEECC--CCCEEEEEeCCCeEEEEeCCCC-eeEEEeCCCCCEEEEEECCCCCEEE
Confidence 67889899988 89999999999999999 9999999999999999998554 5667778999999999999999999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL 187 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~ 187 (703)
+++.|+.|++||. +++.+..+.+|.. .|.+++|+||+++|++++.|+.|++||. +++.
T Consensus 361 ~~~~dg~v~~~~~-~~~~~~~~~~~~~--------------------~v~~~~~s~dg~~l~~~~~d~~v~~~~~-~~~~ 418 (577)
T 2ymu_A 361 SASDDKTVKLWNR-NGQLLQTLTGHSS--------------------SVRGVAFSPDGQTIASASDDKTVKLWNR-NGQL 418 (577)
T ss_dssp EEETTSEEEEEET-TCCEEEEEECCSS--------------------CEEEEEECTTSSCEEEEETTSEEEEECT-TCCE
T ss_pred EEeCCCEEEEEcC-CCCEEEEecCCCC--------------------CeEEEEECCCCCEEEEEeCCCEEEEEeC-CCCE
Confidence 9999999999995 5777777777654 8999999999999999999999999995 5667
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
+..+..+. ..|.+++|+|+++.+++++.++ .+++||. +++....+.+|...|.+++|+|++++|+
T Consensus 419 ~~~~~~~~--------~~v~~~~~s~d~~~l~~~~~d~------~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~la 483 (577)
T 2ymu_A 419 LQTLTGHS--------SSVWGVAFSPDDQTIASASDDK------TVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIA 483 (577)
T ss_dssp EEEEECCS--------SCEEEEEECTTSSEEEEEETTS------EEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEE
T ss_pred EEEecCCC--------CCeEEEEECCCCCEEEEEcCCC------EEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEE
Confidence 77766544 4899999999999999887663 8999996 5677788889999999999999999999
Q ss_pred EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
+++.|+ |++|+. +++....+ ..+++|+|++ .+|++++.|+.+++ |+..
T Consensus 484 s~~~d~~i~iw~~-~~~~~~~~~~h~~~v~~l~~s~dg--~~l~s~~~dg~v~l-wd~~ 538 (577)
T 2ymu_A 484 SASDDKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDG--QTIASASDDKTVKL-WNRN 538 (577)
T ss_dssp EEETTSEEEEEET-TSCEEEEEECCSSCEEEEEECTTS--SCEEEEETTSEEEE-ECTT
T ss_pred EEeCCCEEEEEcC-CCCEEEEEeCCCCCEEEEEEcCCC--CEEEEEECcCEEEE-EeCC
Confidence 999999 999996 45554433 3679999999 88999999999998 8854
No 36
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.4e-28 Score=258.02 Aligned_cols=247 Identities=15% Similarity=0.162 Sum_probs=203.3
Q ss_pred CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC--CceeEEEecCCCcEEEEEEecC--CCEEEEEE
Q psy7108 35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE--TDTQHETIQLLSDALCVAYKPD--GTEIVVAT 110 (703)
Q Consensus 35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~--~~~~~~~~~~~~~V~~v~~spd--g~~las~s 110 (703)
|+++ .++.+|.++|++++|+| ++++|++|+.||.|++||+.. ......+..|...|.+++|+|+ +++|++++
T Consensus 1 G~~~--~~~~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~ 76 (379)
T 3jrp_A 1 GSMV--VIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCS 76 (379)
T ss_dssp ------CCEEECCCCEEEEEECS--SSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEE
T ss_pred CCcc--EEecCCcccEEEEEEcC--CCCEEEEEECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEec
Confidence 4556 88999999999999999 999999999999999999973 3344556679999999999987 89999999
Q ss_pred CCCeEEEEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCc
Q psy7108 111 LDGQLIMFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 111 ~dg~I~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~ 186 (703)
.||.|++||+++++ ....+..|.. .|.+++|+|+ +++|++++.|+.|++||++++.
T Consensus 77 ~dg~v~iwd~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 136 (379)
T 3jrp_A 77 YDGKVLIWKEENGRWSQIAVHAVHSA--------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENG 136 (379)
T ss_dssp TTSCEEEEEEETTEEEEEEEECCCSS--------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTS
T ss_pred cCCEEEEEEcCCCceeEeeeecCCCc--------------------ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCC
Confidence 99999999999987 5555655543 8999999999 9999999999999999999874
Q ss_pred eEEEEEeccCCccccccccceeeeecc-------------CCCEEEEEcccCCCCCeeEEECCCCCCCc----cceeecC
Q psy7108 187 LLKKFTITQNKSLDGINDFINRRKMTE-------------FGNVSLIETRETHEGGNVVLKLPGVKKGD----MAARVLK 249 (703)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~sp-------------dg~~l~~~~~~~~~~~~~~i~iwd~~~~~----~~~~~~~ 249 (703)
...... ..++...|.+++|+| ++..+++++.++ .|++||++++. ....+.+
T Consensus 137 ~~~~~~------~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~ 204 (379)
T 3jrp_A 137 TTSPII------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEG 204 (379)
T ss_dssp CCCEEE------EECCTTCEEEEEECCCC----------CTTCEEEEEETTS------CEEEEEEETTTTEEEEEEEECC
T ss_pred ceeeEE------ecCCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCC------eEEEEEecCCCcceeeEEEEec
Confidence 332222 123445899999999 688888887764 79999998764 3456678
Q ss_pred CccceEEEEEcCC---CCEEEEEeCCC-EEEEEcCCCce-----------ecceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108 250 PEVRVFCVKFSPT---GQAWVAATTEG-VHIYSLDSGYV-----------FDPFLLDISITPQSVKEALADKDYAKALMM 314 (703)
Q Consensus 250 h~~~V~~l~~spd---g~~l~s~s~Dg-v~iwd~~~~~~-----------~~~~~~~~~~spd~~~~~l~sg~~~~~l~l 314 (703)
|...|.+++|+|+ +++|++++.|| |++|++.++.. +.....+++|+|++ ..+++++.++.+.+
T Consensus 205 h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g--~~l~~~~~dg~i~i 282 (379)
T 3jrp_A 205 HSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTL 282 (379)
T ss_dssp CSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSS--CCEEEEESSSSEEE
T ss_pred ccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCC--CEEEEecCCCcEEE
Confidence 9999999999999 89999999999 99999988631 12234678999999 78888888999998
Q ss_pred EEecCc
Q psy7108 315 SLKLNE 320 (703)
Q Consensus 315 a~~l~~ 320 (703)
|+++.
T Consensus 283 -w~~~~ 287 (379)
T 3jrp_A 283 -WKENL 287 (379)
T ss_dssp -EEEEE
T ss_pred -EeCCC
Confidence 88764
No 37
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.96 E-value=1.4e-27 Score=253.55 Aligned_cols=259 Identities=14% Similarity=0.178 Sum_probs=216.1
Q ss_pred ccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC
Q psy7108 32 DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL 111 (703)
Q Consensus 32 d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~ 111 (703)
...|...++..+.+|.++|++++|+| ++++|++|+.||.|++||+.+++....+..|...|.+++|+|++++|++++.
T Consensus 17 ~~~G~~~~~~~l~~h~~~v~~~~~s~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~ 94 (369)
T 3zwl_B 17 YFQGSHMKAIKLTGHERPLTQVKYNK--EGDLLFSCSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSA 94 (369)
T ss_dssp CSSCCSEEEEEEECCSSCEEEEEECT--TSCEEEEEESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeccccccEEEEEeeceEEEEEEcC--CCCEEEEEeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeC
Confidence 34666665577899999999999999 9999999999999999999998888888889999999999999999999999
Q ss_pred CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCc
Q psy7108 112 DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGI 186 (703)
Q Consensus 112 dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~ 186 (703)
|+.|++||+++++.+..+. +.. .+.+++|+|+++++++++.+ +.|++||++...
T Consensus 95 dg~i~iwd~~~~~~~~~~~-~~~--------------------~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~ 153 (369)
T 3zwl_B 95 DYSIKLWDVSNGQCVATWK-SPV--------------------PVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDS 153 (369)
T ss_dssp TTEEEEEETTTCCEEEEEE-CSS--------------------CEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECT
T ss_pred CCeEEEEECCCCcEEEEee-cCC--------------------CeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCc
Confidence 9999999999999888877 322 79999999999999999998 999999998764
Q ss_pred eEEEEEeccC---Cccccccc--cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-CccceeecCCccceEEEEEc
Q psy7108 187 LLKKFTITQN---KSLDGIND--FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVRVFCVKFS 260 (703)
Q Consensus 187 ~~~~~~~~~~---~~~~~~~~--~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~V~~l~~s 260 (703)
....+..... .....+.. .+.+++|+|+++.+++++.++ .|++||+++ ++....+..|...|.+++|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~ 227 (369)
T 3zwl_B 154 ATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDG------KISKYDVSNNYEYVDSIDLHEKSISDMQFS 227 (369)
T ss_dssp TTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTS------EEEEEETTTTTEEEEEEECCSSCEEEEEEC
T ss_pred cceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCC------EEEEEECCCCcEeEEEEecCCCceeEEEEC
Confidence 3322221111 11222333 789999999999999887764 899999998 67788888999999999999
Q ss_pred CCCCEEEEEeCCC-EEEEEcCCCceecce---------------------------------------------------
Q psy7108 261 PTGQAWVAATTEG-VHIYSLDSGYVFDPF--------------------------------------------------- 288 (703)
Q Consensus 261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~--------------------------------------------------- 288 (703)
|++++|++++.|+ |++||+.+++....+
T Consensus 228 ~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~ 307 (369)
T 3zwl_B 228 PDLTYFITSSRDTNSFLVDVSTLQVLKKYETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEE 307 (369)
T ss_dssp TTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCE
T ss_pred CCCCEEEEecCCceEEEEECCCCceeeeecCCCCceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcc
Confidence 9999999999999 999999876543211
Q ss_pred ----------eeeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108 289 ----------LLDISITPQSVKEALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 289 ----------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~ 322 (703)
..+++|+|++ .++++++.++.+++ |+++...
T Consensus 308 ~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~v~i-w~~~~~~ 348 (369)
T 3zwl_B 308 IGRVQGHFGPLNTVAISPQG--TSYASGGEDGFIRL-HHFEKSY 348 (369)
T ss_dssp EEEEECCSSCEEEEEECTTS--SEEEEEETTSEEEE-EEECHHH
T ss_pred hhheecccCcEEEEEECCCC--CEEEEEcCCCeEEE-EECcccc
Confidence 1347888888 78889999999998 9887653
No 38
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=2.3e-27 Score=249.48 Aligned_cols=265 Identities=17% Similarity=0.206 Sum_probs=208.9
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCc-----eeEEEecCCCcEEEEEEecCCCEEE
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETD-----TQHETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~la 107 (703)
+.++. .+|+||++.|++++|+| + +++|+|||.||+|+|||+.+.+ ....+..|...|.+++|+|++++|+
T Consensus 27 ~~~l~--~tL~GH~~~V~~v~~sp--~~~~~l~S~s~D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~ 102 (340)
T 4aow_A 27 QMTLR--GTLKGHNGWVTQIATTP--QFPDMILSASRDKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 102 (340)
T ss_dssp EEEEE--EEECCCSSCEEEEEECT--TCTTEEEEEETTSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred ceEEE--EEECCccCCEEEEEEeC--CCCCEEEEEcCCCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE
Confidence 44555 78999999999999999 6 6899999999999999997654 2344556899999999999999999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEeccccCCC-------------CC----------CCCccchhhcccCCccEEEEEEcCC
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEARRDLDS-------------GR----------LDTDLVTREQSLKAKAVSTVCYSAD 164 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~-------------~~----------~~~~~~~~~~~~~~~~V~~i~~spd 164 (703)
+++.|+.|++|+............+..... +. ............|...+..++|+++
T Consensus 103 s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~ 182 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPN 182 (340)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSC
T ss_pred EEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCcccceEEccC
Confidence 999999999999988876655544322110 00 0001112233457788999999886
Q ss_pred C--CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108 165 G--SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD 242 (703)
Q Consensus 165 g--~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~ 242 (703)
+ ..+++++.|+.|++||+++++.+..+..+. ..|++++|+|+++++++++.++ .|++||+++++
T Consensus 183 ~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~--------~~v~~~~~s~~~~~l~s~s~Dg------~i~iwd~~~~~ 248 (340)
T 4aow_A 183 SSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHT--------GYLNTVTVSPDGSLCASGGKDG------QAMLWDLNEGK 248 (340)
T ss_dssp SSSCEEEEEETTSCEEEEETTTTEEEEEECCCS--------SCEEEEEECTTSSEEEEEETTC------EEEEEETTTTE
T ss_pred CCCcEEEEEcCCCEEEEEECCCCceeeEecCCC--------CcEEEEEECCCCCEEEEEeCCC------eEEEEEeccCc
Confidence 4 578899999999999999999888876544 4899999999999999888764 89999999998
Q ss_pred cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc---------------eeeeEEEccchhhhHhhcC
Q psy7108 243 MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP---------------FLLDISITPQSVKEALADK 306 (703)
Q Consensus 243 ~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~---------------~~~~~~~spd~~~~~l~sg 306 (703)
.+..+..+ ..|.+++|+|++.++ +++.|+ |++||++++..... ...+++|+|++ .+|+++
T Consensus 249 ~~~~~~~~-~~v~~~~~~~~~~~~-~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg--~~l~sg 324 (340)
T 4aow_A 249 HLYTLDGG-DIINALCFSPNRYWL-CAATGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADG--QTLFAG 324 (340)
T ss_dssp EEEEEECS-SCEEEEEECSSSSEE-EEEETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTS--SEEEEE
T ss_pred eeeeecCC-ceEEeeecCCCCcee-eccCCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCC--CEEEEE
Confidence 87766654 579999999988655 455677 99999988765332 23578999999 889999
Q ss_pred CcceEEEEEEecCch
Q psy7108 307 DYAKALMMSLKLNEQ 321 (703)
Q Consensus 307 ~~~~~l~la~~l~~~ 321 (703)
+.|+.+++ |++...
T Consensus 325 s~Dg~v~i-W~~~tG 338 (340)
T 4aow_A 325 YTDNLVRV-WQVTIG 338 (340)
T ss_dssp ETTSCEEE-EEEEC-
T ss_pred eCCCEEEE-EeCCCc
Confidence 99999999 988654
No 39
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.96 E-value=1.4e-28 Score=263.47 Aligned_cols=214 Identities=11% Similarity=0.162 Sum_probs=173.4
Q ss_pred ceeecc-CC--CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEec
Q psy7108 28 VKKGDM-AA--RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKP 101 (703)
Q Consensus 28 v~~~d~-tg--~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~sp 101 (703)
+++|+. ++ +++ ..+.+|.+.|++++|+| ++++|++|+.|++|++||+.++. .......|...|.+++|+|
T Consensus 35 i~iw~~~~~~~~~~--~~~~~h~~~v~~~~~s~--~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 110 (377)
T 3dwl_C 35 VELYEQDGNGWKHA--RTFSDHDKIVTCVDWAP--KSNRIVTCSQDRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSP 110 (377)
T ss_dssp BCEEEEETTEEEEC--CCBCCCSSCEEEEEECT--TTCCEEEEETTSSEEEC------CCCCEEECCCCSSCEEEEECCT
T ss_pred EEEEEccCCceEEE--EEEecCCceEEEEEEeC--CCCEEEEEeCCCeEEEEEcCCCCceeeeeEecccCCceEEEEECC
Confidence 566664 44 566 88999999999999999 99999999999999999998875 4566667999999999999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcE---EEEEec-cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcE
Q psy7108 102 DGTEIVVATLDGQLIMFDVESAAQ---VGSVEA-RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYI 177 (703)
Q Consensus 102 dg~~las~s~dg~I~vwd~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I 177 (703)
+++.|++++.|+.|++||+++++. ...+.. |. ..|.+++|+|++++|++++.|+.|
T Consensus 111 ~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~--------------------~~v~~~~~~~~~~~l~~~~~d~~i 170 (377)
T 3dwl_C 111 NEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLR--------------------STILSLDWHPNNVLLAAGCADRKA 170 (377)
T ss_dssp TSSCCEEEESSSCEEECCC-----CCCCEEECSSCC--------------------SCEEEEEECTTSSEEEEEESSSCE
T ss_pred CCCEEEEEecCCeEEEEEECCcccceeeeEeecccC--------------------CCeEEEEEcCCCCEEEEEeCCCEE
Confidence 999999999999999999998763 455554 43 489999999999999999999999
Q ss_pred EEEECCCCc------------------eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108 178 CIYSSREGI------------------LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK 239 (703)
Q Consensus 178 ~lwD~~~~~------------------~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~ 239 (703)
++||++... ++..+ +|...|.+++|+|+|+++++++.++ .|++||+.
T Consensus 171 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~v~~~~~sp~~~~l~~~~~d~------~i~iwd~~ 235 (377)
T 3dwl_C 171 YVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY---------PSGGWVHAVGFSPSGNALAYAGHDS------SVTIAYPS 235 (377)
T ss_dssp EEEEECCSSCC-CCCSCSSCSCCCEEEEEECC---------CCSSSEEEEEECTTSSCEEEEETTT------EEC-CEEC
T ss_pred EEEEEEecccCCCccccccccccchhhhhhcc---------cCCceEEEEEECCCCCEEEEEeCCC------cEEEEECC
Confidence 999996432 22222 4566899999999999999888764 89999999
Q ss_pred CCcc----ceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108 240 KGDM----AARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280 (703)
Q Consensus 240 ~~~~----~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~ 280 (703)
+++. +..+..|...|.+++|+|++++|++++.+++.+|+..
T Consensus 236 ~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~~~~~~~~~~ 280 (377)
T 3dwl_C 236 APEQPPRALITVKLSQLPLRSLLWANESAIVAAGYNYSPILLQGN 280 (377)
T ss_dssp STTSCEEECCCEECSSSCEEEEEEEETTEEEEEESSSSEEEECCC
T ss_pred CCCCcceeeEeecCCCCceEEEEEcCCCCEEEEEcCCcEEEEEeC
Confidence 9987 7788899999999999999999999988887688765
No 40
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.96 E-value=5.2e-28 Score=260.25 Aligned_cols=215 Identities=16% Similarity=0.268 Sum_probs=184.2
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE-----ecCCCcEEEEEEec-CCCEEEEEECCCe
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET-----IQLLSDALCVAYKP-DGTEIVVATLDGQ 114 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~-----~~~~~~V~~v~~sp-dg~~las~s~dg~ 114 (703)
+++.+|.+.|.+++|+|. ++..|++|+.|++|++||+.+++..... ..|...|.+++|+| +++.+++|+.|++
T Consensus 151 ~~~~gh~~~v~~~~~~~~-~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~sgs~D~~ 229 (380)
T 3iz6_a 151 RVLTGHKGYASSCQYVPD-QETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLNANMFISGSCDTT 229 (380)
T ss_dssp CBCCCCSSCCCCCBCCSS-SSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSSCCEEEEEETTSC
T ss_pred eeccCCCcceEEEEEecC-CCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCCCCEEEEEECCCe
Confidence 678999999999999993 3567999999999999999998766555 45888999999987 8899999999999
Q ss_pred EEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEe
Q psy7108 115 LIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTI 193 (703)
Q Consensus 115 I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~ 193 (703)
|++||++ +++.+..+.+|.. .|.+++|+|++++|++|+.|++|++||++++.++..+..
T Consensus 230 v~~wd~~~~~~~~~~~~~h~~--------------------~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~~ 289 (380)
T 3iz6_a 230 VRLWDLRITSRAVRTYHGHEG--------------------DINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYNR 289 (380)
T ss_dssp EEEEETTTTCCCCEEECCCSS--------------------CCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEECC
T ss_pred EEEEECCCCCcceEEECCcCC--------------------CeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEecc
Confidence 9999998 4566777777654 899999999999999999999999999999998888765
Q ss_pred ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee----cCCccceEEEEEcCCCCEEEEE
Q psy7108 194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV----LKPEVRVFCVKFSPTGQAWVAA 269 (703)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~----~~h~~~V~~l~~spdg~~l~s~ 269 (703)
+... ...+...+.+++|+|+|+++++++.++ .|++||..+++....+ .+|...|.+++|+|+|++|++|
T Consensus 290 ~~~~-~~~~~~~v~~~~~s~~g~~l~~g~~dg------~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sg 362 (380)
T 3iz6_a 290 EPDR-NDNELPIVTSVAFSISGRLLFAGYSNG------DCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALCTG 362 (380)
T ss_dssp CCSS-SCCSSCSCSEEEECSSSSEEEEECTTS------CEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEEEE
T ss_pred cccc-cccccCceEEEEECCCCCEEEEEECCC------CEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEEEe
Confidence 4331 122334689999999999999988764 8999999988876665 5799999999999999999999
Q ss_pred eCCC-EEEEEcCCCc
Q psy7108 270 TTEG-VHIYSLDSGY 283 (703)
Q Consensus 270 s~Dg-v~iwd~~~~~ 283 (703)
+.|+ |++|++...+
T Consensus 363 s~D~~i~iW~~~~~~ 377 (380)
T 3iz6_a 363 SWDKNLKIWAFSGHR 377 (380)
T ss_dssp CTTSCEEEEECCSSS
T ss_pred eCCCCEEEEecCCCc
Confidence 9999 9999997654
No 41
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.96 E-value=2.5e-27 Score=256.78 Aligned_cols=259 Identities=13% Similarity=0.182 Sum_probs=211.9
Q ss_pred ceeec-cCCCccccccccC-CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108 28 VKKGD-MAARVLKPEVLSG-HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~g-H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~ 105 (703)
+++|+ .+++.. ..+.. |.+.|++++|+| ++++|++|+.||.|++||+.+++.......|...|.+++|+ ++.
T Consensus 115 v~lw~~~~~~~~--~~~~~~~~~~v~~v~~s~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~--~~~ 188 (401)
T 4aez_A 115 VYVWNADSGSVS--ALAETDESTYVASVKWSH--DGSFLSVGLGNGLVDIYDVESQTKLRTMAGHQARVGCLSWN--RHV 188 (401)
T ss_dssp EEEEETTTCCEE--EEEECCTTCCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEEE--TTE
T ss_pred EEEeeCCCCcEe--EeeecCCCCCEEEEEECC--CCCEEEEECCCCeEEEEECcCCeEEEEecCCCCceEEEEEC--CCE
Confidence 55566 366666 55554 899999999999 99999999999999999999988888888899999999994 679
Q ss_pred EEEEECCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108 106 IVVATLDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184 (703)
Q Consensus 106 las~s~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~ 184 (703)
+++++.||.|++||++ .+.....+.+|.. .|.+++|+|++++|++++.|+.|++||+++
T Consensus 189 l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~ 248 (401)
T 4aez_A 189 LSSGSRSGAIHHHDVRIANHQIGTLQGHSS--------------------EVCGLAWRSDGLQLASGGNDNVVQIWDARS 248 (401)
T ss_dssp EEEEETTSEEEEEETTSSSCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTC
T ss_pred EEEEcCCCCEEEEecccCcceeeEEcCCCC--------------------CeeEEEEcCCCCEEEEEeCCCeEEEccCCC
Confidence 9999999999999998 4566777777654 899999999999999999999999999999
Q ss_pred CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ 264 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~ 264 (703)
++.+..+..+. ..|.+++|+|++..+++.+++..+ ..|++||+.+++....+. +...|.+++|+|+++
T Consensus 249 ~~~~~~~~~~~--------~~v~~~~~~p~~~~ll~~~~gs~d---~~i~i~d~~~~~~~~~~~-~~~~v~~~~~s~~~~ 316 (401)
T 4aez_A 249 SIPKFTKTNHN--------AAVKAVAWCPWQSNLLATGGGTMD---KQIHFWNAATGARVNTVD-AGSQVTSLIWSPHSK 316 (401)
T ss_dssp SSEEEEECCCS--------SCCCEEEECTTSTTEEEEECCTTT---CEEEEEETTTCCEEEEEE-CSSCEEEEEECSSSS
T ss_pred CCccEEecCCc--------ceEEEEEECCCCCCEEEEecCCCC---CEEEEEECCCCCEEEEEe-CCCcEEEEEECCCCC
Confidence 98887776443 489999999988776665431111 489999999998877664 567899999999999
Q ss_pred EEEEEe--CCC-EEEEEcCCCceecc--------eeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHHH
Q psy7108 265 AWVAAT--TEG-VHIYSLDSGYVFDP--------FLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIHV 327 (703)
Q Consensus 265 ~l~s~s--~Dg-v~iwd~~~~~~~~~--------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~v 327 (703)
.+++++ .|| |++|++.++..... ....++|+|++ ..+++++.++.+.+ |++.....+.+.
T Consensus 317 ~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg--~~l~s~~~dg~i~i-w~~~~~~~~~~~ 387 (401)
T 4aez_A 317 EIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDG--RILSTAASDENLKF-WRVYDGDHVKRP 387 (401)
T ss_dssp EEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTS--SEEEEECTTSEEEE-EECCC-------
T ss_pred eEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCC--CEEEEEeCCCcEEE-EECCCCcccccc
Confidence 998854 788 99999988655333 23568999999 88999999999999 999877655543
No 42
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.3e-27 Score=278.01 Aligned_cols=245 Identities=17% Similarity=0.262 Sum_probs=205.9
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----eeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----TQHETIQLLSDALCVAYKPDGTEIVVATLDGQL 115 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I 115 (703)
..+.+|++.|++++|+|. ++++|+|||.|++|++|++.+.. ....+..|...|.+++|+|++++|++|+.|++|
T Consensus 376 ~~l~~H~~~V~~v~~~~~-~~~~l~s~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~sgs~Dg~v 454 (694)
T 3dm0_A 376 GTMRAHTDMVTAIATPID-NADIIVSASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSDGQFALSGSWDGEL 454 (694)
T ss_dssp EEEECCSSCEEEEECCTT-CCSEEEEEETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred hhcccCCceeEEEEecCC-CCCEEEEEeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCCCCEEEEEeCCCcE
Confidence 568899999999999983 45799999999999999997543 234566799999999999999999999999999
Q ss_pred EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108 116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ 195 (703)
Q Consensus 116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~ 195 (703)
++||+.+++....+.+|.. .|.+++|+|+++.|++|+.|++|++||....... .+.
T Consensus 455 ~vwd~~~~~~~~~~~~h~~--------------------~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~-~~~--- 510 (694)
T 3dm0_A 455 RLWDLAAGVSTRRFVGHTK--------------------DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKY-TIS--- 510 (694)
T ss_dssp EEEETTTTEEEEEEECCSS--------------------CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEE-EEC---
T ss_pred EEEECCCCcceeEEeCCCC--------------------CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcce-eec---
Confidence 9999999999998888765 8999999999999999999999999998754332 221
Q ss_pred CCccccccccceeeeeccCC--CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108 196 NKSLDGINDFINRRKMTEFG--NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG 273 (703)
Q Consensus 196 ~~~~~~~~~~v~~~~~spdg--~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg 273 (703)
....+|...|.+++|+|++ ..+++++.+ +.|++||+++++....+.+|...|.+++|+|++++|++++.|+
T Consensus 511 -~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d------~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg 583 (694)
T 3dm0_A 511 -EGGEGHRDWVSCVRFSPNTLQPTIVSASWD------KTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDG 583 (694)
T ss_dssp -SSTTSCSSCEEEEEECSCSSSCEEEEEETT------SCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred -cCCCCCCCcEEEEEEeCCCCcceEEEEeCC------CeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 1234577789999999987 456666655 3899999999999889999999999999999999999999999
Q ss_pred -EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 274 -VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 274 -v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
|++||+.+++.+..+ ...++|+|++ .+++.+. +..+++ |++...
T Consensus 584 ~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~-~~~i~i-wd~~~~ 633 (694)
T 3dm0_A 584 VVLLWDLAEGKKLYSLEANSVIHALCFSPNR--YWLCAAT-EHGIKI-WDLESK 633 (694)
T ss_dssp BCEEEETTTTEEEECCBCSSCEEEEEECSSS--SEEEEEE-TTEEEE-EETTTT
T ss_pred eEEEEECCCCceEEEecCCCcEEEEEEcCCC--cEEEEEc-CCCEEE-EECCCC
Confidence 999999998875443 4678999998 5555544 455777 888754
No 43
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.96 E-value=5.1e-27 Score=254.22 Aligned_cols=265 Identities=17% Similarity=0.215 Sum_probs=205.7
Q ss_pred CCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC-------ceeEEEecC
Q psy7108 18 GGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET-------DTQHETIQL 90 (703)
Q Consensus 18 ~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~-------~~~~~~~~~ 90 (703)
+.+..+.+|+........+.+ ..+.+|.++|++++|+|. ++++|++|+.||+|++||+.++ .....+..|
T Consensus 54 ~~~g~i~v~~~~~~~~~~~~~--~~~~~h~~~V~~~~~~p~-~~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 54 SGGGAFLVLPLGKTGRVDKNV--PLVCGHTAPVLDIAWCPH-NDNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp SSSCCEEEEETTCCEECCTTC--CCBCCCSSCEEEEEECTT-CTTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred cCCCEEEEEECccCCCCCCCC--ceEecCCCCEEEEEeCCC-CCCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 334445555443211111344 678899999999999995 6889999999999999999887 456677789
Q ss_pred CCcEEEEEEecCC-CEEEEEECCCeEEEEEcCCCcEEEEE--eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108 91 LSDALCVAYKPDG-TEIVVATLDGQLIMFDVESAAQVGSV--EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC 167 (703)
Q Consensus 91 ~~~V~~v~~spdg-~~las~s~dg~I~vwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~ 167 (703)
...|.+++|+|++ ..|++++.|+.|++||+++++.+..+ ..|.. .|.+++|+|++++
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~ 190 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPDVHPD--------------------TIYSVDWSRDGAL 190 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTTTCCS--------------------CEEEEEECTTSSC
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecCCCCC--------------------ceEEEEECCCCCE
Confidence 9999999999998 69999999999999999999988888 55544 8999999999999
Q ss_pred EEEEecCCcEEEEECCCCceEEEE-EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc-ce
Q psy7108 168 ILAAGQSKYICIYSSREGILLKKF-TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM-AA 245 (703)
Q Consensus 168 l~s~s~dg~I~lwD~~~~~~~~~~-~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~ 245 (703)
|++++.|+.|++||+++++.+..+ ..+.. ..+.++.|+|+++.++++.... .+..|++||+++++. ..
T Consensus 191 l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~l~~g~~~~---~d~~i~iwd~~~~~~~~~ 260 (402)
T 2aq5_A 191 ICTSCRDKRVRVIEPRKGTVVAEKDRPHEG-------TRPVHAVFVSEGKILTTGFSRM---SERQVALWDTKHLEEPLS 260 (402)
T ss_dssp EEEEETTSEEEEEETTTTEEEEEEECSSCS-------SSCCEEEECSTTEEEEEEECTT---CCEEEEEEETTBCSSCSE
T ss_pred EEEEecCCcEEEEeCCCCceeeeeccCCCC-------CcceEEEEcCCCcEEEEeccCC---CCceEEEEcCccccCCce
Confidence 999999999999999999988877 34333 1478899999999888873211 115899999998764 32
Q ss_pred ee-cCCccceEEEEEcCCCCEEEE-EeCCC-EEEEEcCCCce----ec-----ceeeeEEEccchhhhHhhcCCcceEEE
Q psy7108 246 RV-LKPEVRVFCVKFSPTGQAWVA-ATTEG-VHIYSLDSGYV----FD-----PFLLDISITPQSVKEALADKDYAKALM 313 (703)
Q Consensus 246 ~~-~~h~~~V~~l~~spdg~~l~s-~s~Dg-v~iwd~~~~~~----~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~ 313 (703)
.. ..|...+.+++|+|+++.+++ ++.|+ |++|++.+++. +. ....+++|+|++ .++++++ +.++
T Consensus 261 ~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~~~~~l~~~~~~~~v~~~~~sp~~--~~~~s~~--~~~~ 336 (402)
T 2aq5_A 261 LQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAPFLHYLSMFSSKESQRGMGYMPKR--GLEVNKC--EIAR 336 (402)
T ss_dssp EEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTTCEEEEEEECCSSCCSEEEECCGG--GSCGGGT--EEEE
T ss_pred EEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCcceEeecccccCCcccceEEeccc--ccceecc--eeEE
Confidence 22 357788999999999999965 55788 99999998773 21 224679999999 5666543 4666
Q ss_pred EEEecCc
Q psy7108 314 MSLKLNE 320 (703)
Q Consensus 314 la~~l~~ 320 (703)
+ |++..
T Consensus 337 ~-~~l~~ 342 (402)
T 2aq5_A 337 F-YKLHE 342 (402)
T ss_dssp E-EEEET
T ss_pred E-EEcCC
Confidence 5 66653
No 44
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=4.1e-27 Score=244.18 Aligned_cols=234 Identities=14% Similarity=0.213 Sum_probs=181.2
Q ss_pred eeecccCCceEEecCC--ceeeccC---CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--ee
Q psy7108 12 TRETHEGGNVVLKLPG--VKKGDMA---ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQ 84 (703)
Q Consensus 12 ~~~~~~~~~~~i~~~~--v~~~d~t---g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~ 84 (703)
..|...|...+....+ +++|+.. ++++ .++.+|.++|++++|+|..++++|+||+.|++|++||+.++. ..
T Consensus 15 ~~~s~~g~~las~s~D~~v~iw~~~~~~~~~~--~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~~ 92 (297)
T 2pm7_B 15 AVMDYYGKRMATCSSDKTIKIFEVEGETHKLI--DTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQI 92 (297)
T ss_dssp EEECTTSSEEEEEETTSCEEEEEBCSSCBCCC--EEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCCC
T ss_pred EEECCCCCEEEEEeCCCEEEEEecCCCCcEEE--EEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEEE
Confidence 3444444444433333 6677643 3566 889999999999999861138999999999999999998764 34
Q ss_pred EEEecCCCcEEEEEEecC--CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108 85 HETIQLLSDALCVAYKPD--GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160 (703)
Q Consensus 85 ~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~ 160 (703)
.....|...|.+++|+|+ +.+|++++.|+.|++||++++.. ...+.+|. ..|.+++
T Consensus 93 ~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~--------------------~~v~~~~ 152 (297)
T 2pm7_B 93 AVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHA--------------------IGVNSAS 152 (297)
T ss_dssp EEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCS--------------------SCEEEEE
T ss_pred EEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeeccc--------------------CccceEe
Confidence 455568999999999998 89999999999999999987632 23444544 4899999
Q ss_pred EcCC-------------CCEEEEEecCCcEEEEECCCCc----eEEEEEeccCCccccccccceeeeeccCC---CEEEE
Q psy7108 161 YSAD-------------GSCILAAGQSKYICIYSSREGI----LLKKFTITQNKSLDGINDFINRRKMTEFG---NVSLI 220 (703)
Q Consensus 161 ~spd-------------g~~l~s~s~dg~I~lwD~~~~~----~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~ 220 (703)
|+|+ +++|++|+.|++|++||++++. ....+. +|...|.+++|+|++ .++++
T Consensus 153 ~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~--------~H~~~V~~v~~sp~~~~~~~las 224 (297)
T 2pm7_B 153 WAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE--------GHSDWVRDVAWSPTVLLRSYMAS 224 (297)
T ss_dssp ECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC--------CCSSCEEEEEECCCCSSSEEEEE
T ss_pred ecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec--------CCCCceEEEEECCCCCCceEEEE
Confidence 9997 5799999999999999998765 333443 455699999999995 66666
Q ss_pred EcccCCCCCeeEEECCCCCCCcc---ceee--cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 221 ETRETHEGGNVVLKLPGVKKGDM---AARV--LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 221 ~~~~~~~~~~~~i~iwd~~~~~~---~~~~--~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
++.+ +.|++||+++... ...+ ..|...|.+++|+|+|++|++++.|+ |++|+...
T Consensus 225 ~s~D------~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~ 285 (297)
T 2pm7_B 225 VSQD------RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENL 285 (297)
T ss_dssp EETT------SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECT
T ss_pred EECC------CcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECC
Confidence 6655 3899999876431 1122 46788999999999999999999999 99999763
No 45
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=2.1e-27 Score=249.38 Aligned_cols=250 Identities=13% Similarity=0.170 Sum_probs=204.1
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----eeEEEecCCCcEEEEEEec--CCCEEEEEECCCe
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----TQHETIQLLSDALCVAYKP--DGTEIVVATLDGQ 114 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----~~~~~~~~~~~V~~v~~sp--dg~~las~s~dg~ 114 (703)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.++. ....+..|...|.+++|+| ++++|++++.||.
T Consensus 5 ~~~~gH~~~v~~~~~~~--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~ 82 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDF--YGRHVATCSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKT 82 (351)
T ss_dssp CEECCCSSCEEEEEECS--SSSEEEEEETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSC
T ss_pred ccCcccccceeEEEEcC--CCCEEEEeeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCe
Confidence 56789999999999999 99999999999999999998764 3344557999999999999 6999999999999
Q ss_pred EEEEEcCCC---------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECC
Q psy7108 115 LIMFDVESA---------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 115 I~vwd~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~ 183 (703)
|++||++++ +.+..+..|. ..|.+++|+|+ ++++++++.|+.|++||++
T Consensus 83 v~vwd~~~~~~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~ 142 (351)
T 3f3f_A 83 VKLWEEDPDQEECSGRRWNKLCTLNDSK--------------------GSLYSVKFAPAHLGLKLACLGNDGILRLYDAL 142 (351)
T ss_dssp EEEEEECTTSCTTSSCSEEEEEEECCCS--------------------SCEEEEEECCGGGCSEEEEEETTCEEEEEECS
T ss_pred EEEEecCCCcccccccCcceeeeecccC--------------------CceeEEEEcCCCCCcEEEEecCCCcEEEecCC
Confidence 999999887 4455555554 38999999999 9999999999999999999
Q ss_pred CCceEEEEEec-----cCCccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccc
Q psy7108 184 EGILLKKFTIT-----QNKSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVR 253 (703)
Q Consensus 184 ~~~~~~~~~~~-----~~~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~ 253 (703)
+++.+..+... ......++...+.+++|+|+ +..+++++.++ .+.+|+...++. ...+.+|...
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~------~~~~~~~~~~~~~~~~~~~~h~~~ 216 (351)
T 3f3f_A 143 EPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQ------AIIYQRGKDGKLHVAAKLPGHKSL 216 (351)
T ss_dssp STTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTE------EEEEEECTTSCEEEEEECCCCCSC
T ss_pred ChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCC------cEEEEccCCCceeeeeecCCCCcc
Confidence 87654433211 11223356678999999997 88888877653 666776666654 5667789999
Q ss_pred eEEEEEcCCC----CEEEEEeCCC-EEEEEcCCCc---------------------------------------------
Q psy7108 254 VFCVKFSPTG----QAWVAATTEG-VHIYSLDSGY--------------------------------------------- 283 (703)
Q Consensus 254 V~~l~~spdg----~~l~s~s~Dg-v~iwd~~~~~--------------------------------------------- 283 (703)
|.+++|+|++ ++|++++.|| |++||+.++.
T Consensus 217 i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (351)
T 3f3f_A 217 IRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQV 296 (351)
T ss_dssp EEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------CCSEEE
T ss_pred eeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeecccccc
Confidence 9999999998 7899999999 9999997641
Q ss_pred -ee------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 284 -VF------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 284 -~~------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
.. .....+++|+|++ .++++++.|+.+++ |+++..
T Consensus 297 ~~~~~~~~h~~~v~~~~~s~~~--~~l~s~~~dg~v~i-w~~~~~ 338 (351)
T 3f3f_A 297 ELLSEHDDHNGEVWSVSWNLTG--TILSSAGDDGKVRL-WKATYS 338 (351)
T ss_dssp EEEEEECTTSSCEEEEEECSSS--CCEEEEETTSCEEE-EEECTT
T ss_pred cEEEEEecccccEEEEEEcCCC--CEEEEecCCCcEEE-EecCcC
Confidence 11 1224679999999 89999999999999 998754
No 46
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.96 E-value=5.5e-28 Score=260.48 Aligned_cols=255 Identities=11% Similarity=0.143 Sum_probs=206.9
Q ss_pred ccccCCCcCeEEEEEcCCCC----C---CEEEEEeCCCcEEEEEcCCCce-----eEEEecC-----CCcEEEEEEe---
Q psy7108 41 EVLSGHEGPVSCIEFSPVLS----S---TGMVSASWDKTVKLWNAVETDT-----QHETIQL-----LSDALCVAYK--- 100 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~d----g---~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~-----~~~V~~v~~s--- 100 (703)
..+.+|..+|++++|+| + + .+|++++.||.|++||+.++.. ......| ...|.+++|+
T Consensus 56 ~~~~~h~~~v~~~~~~~--~~~~~g~~~~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 133 (397)
T 1sq9_A 56 YSHFVHKSGLHHVDVLQ--AIERDAFELCLVATTSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASN 133 (397)
T ss_dssp EEEECCTTCEEEEEEEE--EEETTTEEEEEEEEEETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC
T ss_pred eEEecCCCcEEEEEEec--ccccCCccccEEEEEcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeecc
Confidence 78889999999999999 9 9 9999999999999999988765 6666667 4899999999
Q ss_pred -cCCCE-EEEEECCCeEEEEEcCC------CcEEE-----EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108 101 -PDGTE-IVVATLDGQLIMFDVES------AAQVG-----SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC 167 (703)
Q Consensus 101 -pdg~~-las~s~dg~I~vwd~~~------~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~ 167 (703)
|+++. |++++.||.|++||+++ ++.+. .+.+.. .....|...|.+++|+|++ .
T Consensus 134 ~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~i~~~~~~~~~-~ 199 (397)
T 1sq9_A 134 DRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTV-------------ESPMTPSQFATSVDISERG-L 199 (397)
T ss_dssp ----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEE-------------CCSSSSCCCCCEEEECTTS-E
T ss_pred CCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeee-------------ccccCCCCCceEEEECCCc-e
Confidence 99999 99999999999999987 54443 443200 0001234589999999999 9
Q ss_pred EEEEecCCcEEEEECCCCceEEEEEeccCCccccc---cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc
Q psy7108 168 ILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI---NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA 244 (703)
Q Consensus 168 l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~---~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~ 244 (703)
+++++.|+.|++||+++++.+..+... .+| ...+.+++|+|+++.+++++.++ ....|++||+++++.+
T Consensus 200 l~~~~~dg~i~i~d~~~~~~~~~~~~~-----~~h~~~~~~i~~i~~~~~~~~l~~~~~d~---~~g~i~i~d~~~~~~~ 271 (397)
T 1sq9_A 200 IATGFNNGTVQISELSTLRPLYNFESQ-----HSMINNSNSIRSVKFSPQGSLLAIAHDSN---SFGCITLYETEFGERI 271 (397)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEECC-----C---CCCCCEEEEEECSSTTEEEEEEEET---TEEEEEEEETTTCCEE
T ss_pred EEEEeCCCcEEEEECCCCceeEEEecc-----ccccccCCccceEEECCCCCEEEEEecCC---CCceEEEEECCCCccc
Confidence 999999999999999999988888751 012 34899999999999999887651 1138999999999988
Q ss_pred eeecC-------------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce----------------------
Q psy7108 245 ARVLK-------------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF---------------------- 288 (703)
Q Consensus 245 ~~~~~-------------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~---------------------- 288 (703)
..+.. |...|.+++|+|++++|++++.|+ |++||+.+++....+
T Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 351 (397)
T 1sq9_A 272 GSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDIEIEEDILAVDEHGDS 351 (397)
T ss_dssp EEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGCSSGGGCCCBCTTSCB
T ss_pred ceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcccchhhhhcccccccc
Confidence 88888 999999999999999999999999 999999988764333
Q ss_pred -----eeeEEEccchhh--------hHhhcCCcceEEEEEEecCc
Q psy7108 289 -----LLDISITPQSVK--------EALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 289 -----~~~~~~spd~~~--------~~l~sg~~~~~l~la~~l~~ 320 (703)
..+++|+|++.. .++++++.++.+.+ |++..
T Consensus 352 ~~~~~v~~~~~~~~g~~~~~~~~~~~~l~s~~~dg~i~i-w~~~~ 395 (397)
T 1sq9_A 352 LAEPGVFDVKFLKKGWRSGMGADLNESLCCVCLDRSIRW-FREAG 395 (397)
T ss_dssp CSSCCEEEEEEECTTTSBSTTCTTSCEEEEEETTTEEEE-EEEEC
T ss_pred ccCCceeEEEeccccccccccccccceEEEecCCCcEEE-EEcCC
Confidence 356899999721 37888999999998 88754
No 47
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5e-28 Score=262.29 Aligned_cols=259 Identities=12% Similarity=0.139 Sum_probs=214.7
Q ss_pred ceeeccCC-----CccccccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCc------eeEE---EecCCC
Q psy7108 28 VKKGDMAA-----RVLKPEVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETD------TQHE---TIQLLS 92 (703)
Q Consensus 28 v~~~d~tg-----~~~~~~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~------~~~~---~~~~~~ 92 (703)
+++|+... +.+ ..+.+|.+.|++++|+| + +.+|++++.||+|++||+.++. .... ...|..
T Consensus 91 v~vw~~~~~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 166 (416)
T 2pm9_A 91 LELYSTNEANNAINSM--ARFSNHSSSVKTVKFNA--KQDNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVD 166 (416)
T ss_dssp EEEECCSSTTSCCCEE--EECCCSSSCCCEEEECS--SSTTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSC
T ss_pred EEEeecccccccccch--hhccCCccceEEEEEcC--CCCCEEEEEcCCCeEEEEECCCCccccccccccccccccCCCC
Confidence 66676443 466 88899999999999999 7 8999999999999999998875 3322 246888
Q ss_pred cEEEEEEecC-CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEE
Q psy7108 93 DALCVAYKPD-GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILA 170 (703)
Q Consensus 93 ~V~~v~~spd-g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s 170 (703)
.|.+++|+|+ +..+++++.|+.|++||+++++.+..+..+.. ...|...|.+++|+|++ .++++
T Consensus 167 ~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~--------------~~~~~~~v~~~~~~~~~~~~l~~ 232 (416)
T 2pm9_A 167 EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSP--------------NSGIKQQLSVVEWHPKNSTRVAT 232 (416)
T ss_dssp CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCC--------------SSCCCCCEEEEEECSSCTTEEEE
T ss_pred CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEecccc--------------ccccCCceEEEEECCCCCCEEEE
Confidence 9999999999 78999999999999999999998888876531 01224589999999997 68999
Q ss_pred EecCC---cEEEEECCCC-ceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108 171 AGQSK---YICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAA 245 (703)
Q Consensus 171 ~s~dg---~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~ 245 (703)
++.|+ .|++||++++ .+...+. .+|...|.+++|+| +++.+++++.++ .|++||+++++.+.
T Consensus 233 ~~~d~~~~~i~~~d~~~~~~~~~~~~-------~~~~~~v~~~~~s~~~~~~l~s~~~dg------~v~~wd~~~~~~~~ 299 (416)
T 2pm9_A 233 ATGSDNDPSILIWDLRNANTPLQTLN-------QGHQKGILSLDWCHQDEHLLLSSGRDN------TVLLWNPESAEQLS 299 (416)
T ss_dssp EECCSSSCCCCEEETTSTTSCSBCCC-------SCCSSCEEEEEECSSCSSCEEEEESSS------EEEEECSSSCCEEE
T ss_pred EECCCCCceEEEEeCCCCCCCcEEee-------cCccCceeEEEeCCCCCCeEEEEeCCC------CEEEeeCCCCccce
Confidence 99998 9999999986 3433332 04556899999999 888888887764 89999999999999
Q ss_pred eecCCccceEEEEEcCCC-CEEEEEeCCC-EEEEEcCCCceec-------------------------------------
Q psy7108 246 RVLKPEVRVFCVKFSPTG-QAWVAATTEG-VHIYSLDSGYVFD------------------------------------- 286 (703)
Q Consensus 246 ~~~~h~~~V~~l~~spdg-~~l~s~s~Dg-v~iwd~~~~~~~~------------------------------------- 286 (703)
.+..|...|.+++|+|++ +++++++.|+ |++|++.++....
T Consensus 300 ~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 379 (416)
T 2pm9_A 300 QFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNTLDEQETETKQQESETDFWNNVSREESKEKPSVFHLQAP 379 (416)
T ss_dssp EEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCSSCC----------------------CCSCCCSSCCCCC
T ss_pred eecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCCcccccccccccCCcccccccccccccccccccccccCC
Confidence 999999999999999999 8999999999 9999998765321
Q ss_pred ----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 287 ----PFLLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 287 ----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
.....++|+|++ .+++.++.++.+++ |++..
T Consensus 380 ~~~~~~~~~~~~s~dg--~~la~~~~d~~v~~-w~~~~ 414 (416)
T 2pm9_A 380 TWYGEPSPAAHWAFGG--KLVQITPDGKGVSI-TNPKI 414 (416)
T ss_dssp STTCCCSCCCEEETTT--EEECBCTTSSCBCC-BCCCC
T ss_pred ccccCCccceEEeeCC--eEEEEeCCCCeEEE-EEecc
Confidence 112368999999 89999999999998 88764
No 48
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.96 E-value=3.7e-27 Score=251.19 Aligned_cols=257 Identities=13% Similarity=0.201 Sum_probs=207.2
Q ss_pred ceeeccC-CC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE--EecCCCcEEEEEEecC
Q psy7108 28 VKKGDMA-AR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE--TIQLLSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~t-g~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~--~~~~~~~V~~v~~spd 102 (703)
+++|+.. ++ ++ ..+.+|...|++++|+| ++++|++++.||.|++||+.+++.... ...|...|.+++|+|+
T Consensus 32 v~i~~~~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~ 107 (372)
T 1k8k_C 32 VHIYEKSGNKWVQV--HELKEHNGQVTGVDWAP--DSNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN 107 (372)
T ss_dssp EEEEEEETTEEEEE--EEEECCSSCEEEEEEET--TTTEEEEEETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT
T ss_pred EEEEeCCCCcEEee--eeecCCCCcccEEEEeC--CCCEEEEEcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC
Confidence 5666644 43 66 88999999999999999 999999999999999999987753333 3568899999999999
Q ss_pred CCEEEEEECCCeEEEEEcCCCcE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEE
Q psy7108 103 GTEIVVATLDGQLIMFDVESAAQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICI 179 (703)
Q Consensus 103 g~~las~s~dg~I~vwd~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~l 179 (703)
+++|++++.|+.|++||+++++. ...+.. .|...|.+++|+|++++|++++.|+.|++
T Consensus 108 ~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~-------------------~~~~~i~~~~~~~~~~~l~~~~~dg~i~~ 168 (372)
T 1k8k_C 108 EKKFAVGSGSRVISICYFEQENDWWVCKHIKK-------------------PIRSTVLSLDWHPNSVLLAAGSCDFKCRI 168 (372)
T ss_dssp SSEEEEEETTSSEEEEEEETTTTEEEEEEECT-------------------TCCSCEEEEEECTTSSEEEEEETTSCEEE
T ss_pred CCEEEEEeCCCEEEEEEecCCCcceeeeeeec-------------------ccCCCeeEEEEcCCCCEEEEEcCCCCEEE
Confidence 99999999999999999988763 222211 12348999999999999999999999999
Q ss_pred EECC------------------CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108 180 YSSR------------------EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG 241 (703)
Q Consensus 180 wD~~------------------~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~ 241 (703)
||++ .++++..+.. +...+.+++|+|+++.+++++.++ .|++||++++
T Consensus 169 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~v~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~ 234 (372)
T 1k8k_C 169 FSAYIKEVEERPAPTPWGSKMPFGELMFESSS--------SCGWVHGVCFSANGSRVAWVSHDS------TVCLADADKK 234 (372)
T ss_dssp EECCCTTTSCCCCCBTTBSCCCTTCEEEECCC--------CSSCEEEEEECSSSSEEEEEETTT------EEEEEEGGGT
T ss_pred EEcccccccccccccccccccchhhheEecCC--------CCCeEEEEEECCCCCEEEEEeCCC------EEEEEECCCC
Confidence 9964 5566665543 445899999999999999888764 8999999999
Q ss_pred ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC--Cc-----------------------------------
Q psy7108 242 DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS--GY----------------------------------- 283 (703)
Q Consensus 242 ~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~--~~----------------------------------- 283 (703)
+.+..+..|...|.+++|+|++++++++ .|+ +++|++.+ +.
T Consensus 235 ~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (372)
T 1k8k_C 235 MAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDSAAGKLSFGGRLDVPKQSSQRGLTARERFQNLDKKASSEG 313 (372)
T ss_dssp TEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEETTTTEEEECCCCCCC--------CHHHHHHHCCCCC----
T ss_pred ceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccCcCceEEEeeccCccccchhhhcchhhhhhhccccccccc
Confidence 9999999999999999999999988887 777 99999987 31
Q ss_pred ----------eecceeeeEEEccch--hhhHhhcCCcceEEEEEEecCchhH
Q psy7108 284 ----------VFDPFLLDISITPQS--VKEALADKDYAKALMMSLKLNEQGL 323 (703)
Q Consensus 284 ----------~~~~~~~~~~~spd~--~~~~l~sg~~~~~l~la~~l~~~~~ 323 (703)
.+...+.++++.+.. ...++++++.|+.+++ |++...+.
T Consensus 314 ~~~~~~~~~~~h~~~v~~~~~~~~~g~~~~~l~s~~~Dg~i~~-W~~~~~~~ 364 (372)
T 1k8k_C 314 SAAAGAGLDSLHKNSVSQISVLSGGKAKCSQFCTTGMDGGMSI-WDVRSLES 364 (372)
T ss_dssp -----CCCSSSSSSCEEEEEEEESTTTSCSEEEEEETTSEEEE-EEHHHHHH
T ss_pred CccccccccccccCCcceeEEecCCCcceeeEEEecCCCceEE-EEecChhH
Confidence 112234567766432 0147889999999999 99876543
No 49
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.96 E-value=8.1e-27 Score=250.59 Aligned_cols=245 Identities=11% Similarity=0.150 Sum_probs=201.2
Q ss_pred CCccccccccCCCcCeEEEEEcCCCCC-CEEEEEeCCCcEEEEEcCCCceeEEEe--cCCCcEEEEEEec-CCCEEEEEE
Q psy7108 35 ARVLKPEVLSGHEGPVSCIEFSPVLSS-TGMVSASWDKTVKLWNAVETDTQHETI--QLLSDALCVAYKP-DGTEIVVAT 110 (703)
Q Consensus 35 g~~~~~~~l~gH~~~V~~l~~sp~~dg-~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~~~V~~v~~sp-dg~~las~s 110 (703)
.++. +.+.+|.+.|++++|+| ++ ++|++|+.||+|++||+.++....... .|...|.+++|+| +++.|++++
T Consensus 63 ~~~~--~~~~~h~~~v~~~~~~~--~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 63 YKLH--RTASPFDRRVTSLEWHP--THPTTVAVGSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp CEEE--EEECCCSSCEEEEEECS--SCTTEEEEEEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred cceE--EeccCCCCCEEEEEECC--CCCCEEEEEcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 4455 77889999999999999 88 999999999999999998876555443 5999999999999 779999999
Q ss_pred CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEE
Q psy7108 111 LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKK 190 (703)
Q Consensus 111 ~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~ 190 (703)
.|+.|++||+++ .....+..+.. +...|.+++|+|++++|++++.|+.|++||+ +++.+..
T Consensus 139 ~d~~i~iwd~~~-~~~~~~~~~~~-----------------~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~ 199 (383)
T 3ei3_B 139 IRGATTLRDFSG-SVIQVFAKTDS-----------------WDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFK 199 (383)
T ss_dssp TTTEEEEEETTS-CEEEEEECCCC-----------------SSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEE
T ss_pred CCCEEEEEECCC-CceEEEeccCC-----------------CCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEE
Confidence 999999999985 55555555432 2347999999999999999999999999999 4667777
Q ss_pred EEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCC----CccceeecCCccceEEEEEcC-CCC
Q psy7108 191 FTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKK----GDMAARVLKPEVRVFCVKFSP-TGQ 264 (703)
Q Consensus 191 ~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~----~~~~~~~~~h~~~V~~l~~sp-dg~ 264 (703)
+..+. ..|.+++|+|+++ .+++++.++ .|++||+++ +...... +|...|.+++|+| +++
T Consensus 200 ~~~h~--------~~v~~~~~~~~~~~~l~s~~~d~------~i~iwd~~~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~ 264 (383)
T 3ei3_B 200 EKLHK--------AKVTHAEFNPRCDWLMATSSVDA------TVKLWDLRNIKDKNSYIAEM-PHEKPVNAAYFNPTDST 264 (383)
T ss_dssp EECSS--------SCEEEEEECSSCTTEEEEEETTS------EEEEEEGGGCCSTTCEEEEE-ECSSCEEEEEECTTTSC
T ss_pred eccCC--------CcEEEEEECCCCCCEEEEEeCCC------EEEEEeCCCCCcccceEEEe-cCCCceEEEEEcCCCCC
Confidence 66544 4899999999999 677666553 899999998 4444444 6899999999999 999
Q ss_pred EEEEEeCCC-EEEEEcCCCceeccee-----------------------eeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 265 AWVAATTEG-VHIYSLDSGYVFDPFL-----------------------LDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 265 ~l~s~s~Dg-v~iwd~~~~~~~~~~~-----------------------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
+|++++.|+ |++||+.++.....+. ..++++|++ .+ +++.++.+.+ |++..
T Consensus 265 ~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~s~dg--~~--s~s~d~~i~i-wd~~~ 339 (383)
T 3ei3_B 265 KLLTTDQRNEIRVYSSYDWSKPDQIIIHPHRQFQHLTPIKATWHPMYDLIVAGRYPDD--QL--LLNDKRTIDI-YDANS 339 (383)
T ss_dssp EEEEEESSSEEEEEETTBTTSCSEEEECCBCCCTTSCCCCCEECSSSSEEEEECBCCT--TT--CTTCCCCEEE-EETTT
T ss_pred EEEEEcCCCcEEEEECCCCccccccccccccccccccceEEeccCCCCceEEEecCCc--cc--ccCCCCeEEE-EecCC
Confidence 999999999 9999998876543332 126778888 44 8889999998 98865
Q ss_pred hh
Q psy7108 321 QG 322 (703)
Q Consensus 321 ~~ 322 (703)
..
T Consensus 340 ~~ 341 (383)
T 3ei3_B 340 GG 341 (383)
T ss_dssp CC
T ss_pred Cc
Confidence 43
No 50
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.96 E-value=3.7e-27 Score=256.11 Aligned_cols=259 Identities=11% Similarity=0.132 Sum_probs=210.5
Q ss_pred ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++||. +++.. ..+.+| ..+....|+| ++++|++|+.||.|++||+.++........|.+.|.+++|+|++++|
T Consensus 80 v~i~d~~~~~~~--~~~~~~-~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 154 (420)
T 3vl1_A 80 DFLFNTIIRDGS--KMLKRA-DYTAVDTAKL--QMRRFILGTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEAL 154 (420)
T ss_dssp EEEEECCSEETT--TTSCSC-CEEEEEEECS--SSCEEEEEETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEE
T ss_pred EEEEEeccccee--eEEecC-CceEEEEEec--CCCEEEEEECCCCEEEEeCCCcceeeecccccCccEEEEECCCCCEE
Confidence 444552 45555 666666 4555667889 99999999999999999998876555445799999999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++++.|+.|++||+++++.+..+.+|.. .|.+++|+|+++.|++++.|+.|++||+++++
T Consensus 155 ~s~s~d~~i~iwd~~~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 155 ISSSQDMQLKIWSVKDGSNPRTLIGHRA--------------------TVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp EEEETTSEEEEEETTTCCCCEEEECCSS--------------------CEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred EEEeCCCeEEEEeCCCCcCceEEcCCCC--------------------cEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 9999999999999999998888887765 89999999999999999999999999999999
Q ss_pred eEEEEEeccCC----------------ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-C
Q psy7108 187 LLKKFTITQNK----------------SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-K 249 (703)
Q Consensus 187 ~~~~~~~~~~~----------------~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~ 249 (703)
.+..+..+... ....+...+.+++|+|+++.+++++.++ .|++||+++++....+. .
T Consensus 215 ~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~ 288 (420)
T 3vl1_A 215 TIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSG------VITVHNVFSKEQTIQLPSK 288 (420)
T ss_dssp EEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTS------CEEEEETTTCCEEEEECCT
T ss_pred eeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCC------eEEEEECCCCceeEEcccc
Confidence 98888754321 0111235677788899999999888764 79999999988766665 4
Q ss_pred CccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCce-ecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 250 PEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGYV-FDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 250 h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~~-~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
|...|.+++|+|+++ +|++++.|| |++||+.+++. ...+ ...+ +.+++ ..+++++.++.+++ |++.
T Consensus 289 ~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~-~~~~~--~~l~s~~~d~~v~i-w~~~ 364 (420)
T 3vl1_A 289 FTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPECPVGEFLINEGTPINNV-YFAAG--ALFVSSGFDTSIKL-DIIS 364 (420)
T ss_dssp TSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEEESTTSCEEEE-EEETT--EEEEEETTTEEEEE-EEEC
T ss_pred cCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcCchhhhhccCCCCceEE-EeCCC--CEEEEecCCccEEE-Eecc
Confidence 788999999999999 999999999 99999988754 2222 2334 45566 68899999999999 9987
Q ss_pred ch
Q psy7108 320 EQ 321 (703)
Q Consensus 320 ~~ 321 (703)
.+
T Consensus 365 ~~ 366 (420)
T 3vl1_A 365 DP 366 (420)
T ss_dssp CT
T ss_pred CC
Confidence 63
No 51
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.96 E-value=3.7e-28 Score=257.96 Aligned_cols=260 Identities=10% Similarity=0.126 Sum_probs=209.8
Q ss_pred ceeecc-CCCccccccccC-----CCcCeEEEEEcCCCC----CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108 28 VKKGDM-AARVLKPEVLSG-----HEGPVSCIEFSPVLS----STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCV 97 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~g-----H~~~V~~l~~sp~~d----g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v 97 (703)
+++|+. +++.+ ..+.. |.+.|++++|+| + +.+|++|+.||.|++||+.+++....+..|...|.++
T Consensus 46 v~vw~~~~~~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~~~~~l~~~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~ 121 (366)
T 3k26_A 46 VTLYECHSQGEI--RLLQSYVDADADENFYTCAWTY--DSNTSHPLLAVAGSRGIIRIINPITMQCIKHYVGHGNAINEL 121 (366)
T ss_dssp EEEEEECGGGCE--EEEEEEECSCTTCCEEEEEEEE--CTTTCCEEEEEEETTCEEEEECTTTCCEEEEEESCCSCEEEE
T ss_pred EEEEEcCCCcEE--EeeeeccccCCCCcEEEEEecc--CCCCCCCEEEEecCCCEEEEEEchhceEeeeecCCCCcEEEE
Confidence 556663 45555 55543 568899999999 7 6799999999999999999988777777899999999
Q ss_pred EEec-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCc
Q psy7108 98 AYKP-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKY 176 (703)
Q Consensus 98 ~~sp-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~ 176 (703)
+|+| +++.|++++.||.|++||+++++.+..+.... .|...|.+++|+|++++|++++.|+.
T Consensus 122 ~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~-----------------~~~~~v~~~~~~~~~~~l~~~~~dg~ 184 (366)
T 3k26_A 122 KFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVE-----------------GHRDEVLSADYDLLGEKIMSCGMDHS 184 (366)
T ss_dssp EECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTT-----------------SCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccc-----------------cccCceeEEEECCCCCEEEEecCCCC
Confidence 9999 89999999999999999999999888773211 12348999999999999999999999
Q ss_pred EEEEECCCCceEEEEEec--------------------cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108 177 ICIYSSREGILLKKFTIT--------------------QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP 236 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~--------------------~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw 236 (703)
|++||+++++....+... ......++...|.+++|+ ++.+++++.++ .|++|
T Consensus 185 i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~------~i~~w 256 (366)
T 3k26_A 185 LKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWL--GDLILSKSCEN------AIVCW 256 (366)
T ss_dssp EEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEE--TTEEEEECSSS------EEEEE
T ss_pred EEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEc--CCEEEEEecCC------EEEEE
Confidence 999999987554322210 001122366789999998 67888777654 89999
Q ss_pred CCCCCcc--------------ceeecCCccceEEEEEcCC--CCEEEEEeCCC-EEEEEcCCCceec------------c
Q psy7108 237 GVKKGDM--------------AARVLKPEVRVFCVKFSPT--GQAWVAATTEG-VHIYSLDSGYVFD------------P 287 (703)
Q Consensus 237 d~~~~~~--------------~~~~~~h~~~V~~l~~spd--g~~l~s~s~Dg-v~iwd~~~~~~~~------------~ 287 (703)
|+.+++. ...+..|...|++++|+|+ +++|++++.|| |++|++.+++... .
T Consensus 257 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~ 336 (366)
T 3k26_A 257 KPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPHKAKCTTLTHHKCGA 336 (366)
T ss_dssp EESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGGGCEEEEECCTTCCS
T ss_pred eCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCccccceEEcccccCC
Confidence 9987754 5666778889999999999 99999999999 9999999875321 2
Q ss_pred eeeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 288 FLLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 288 ~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
...+++|+|++ .++++++.++.+.+ |++.
T Consensus 337 ~v~~~~~s~~~--~~l~s~~~dg~i~i-wd~~ 365 (366)
T 3k26_A 337 AIRQTSFSRDS--SILIAVCDDASIWR-WDRL 365 (366)
T ss_dssp CEEEEEECTTS--SEEEEEETTSEEEE-EEC-
T ss_pred ceEEEEeCCCC--CeEEEEeCCCEEEE-EEec
Confidence 34679999999 88999999999998 8864
No 52
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.96 E-value=4.2e-27 Score=254.97 Aligned_cols=253 Identities=15% Similarity=0.232 Sum_probs=209.2
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ 125 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~ 125 (703)
|.+.|++++|+| ++++|++|+.||.|++|| .++.....+..|...|.+++|+|+++.|++++.|+.|++||+++++.
T Consensus 107 ~~~~v~~~~~s~--~~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~ 183 (425)
T 1r5m_A 107 TTNQVTCLAWSH--DGNSIVTGVENGELRLWN-KTGALLNVLNFHRAPIVSVKWNKDGTHIISMDVENVTILWNVISGTV 183 (425)
T ss_dssp -CBCEEEEEECT--TSSEEEEEETTSCEEEEE-TTSCEEEEECCCCSCEEEEEECTTSSEEEEEETTCCEEEEETTTTEE
T ss_pred CCCceEEEEEcC--CCCEEEEEeCCCeEEEEe-CCCCeeeeccCCCccEEEEEECCCCCEEEEEecCCeEEEEECCCCcE
Confidence 788999999999 999999999999999999 56667777778999999999999999999999999999999999998
Q ss_pred EEEEeccccCC---------------CC-C--------------------CCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108 126 VGSVEARRDLD---------------SG-R--------------------LDTDLVTREQSLKAKAVSTVCYSADGSCIL 169 (703)
Q Consensus 126 ~~~~~~~~~~~---------------~~-~--------------------~~~~~~~~~~~~~~~~V~~i~~spdg~~l~ 169 (703)
+..+..+.... .. . ............|...|.+++|+|++++|+
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~ 263 (425)
T 1r5m_A 184 MQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLL 263 (425)
T ss_dssp EEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEE
T ss_pred EEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEE
Confidence 88777654320 00 0 000011112335788999999999999999
Q ss_pred EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC
Q psy7108 170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK 249 (703)
Q Consensus 170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~ 249 (703)
+++.|+.|++||+++++.+..+..+. ..+.+++|+|++ .+++++.++ .|++||+++++....+..
T Consensus 264 ~~~~d~~i~i~d~~~~~~~~~~~~~~--------~~i~~~~~~~~~-~l~~~~~d~------~i~i~d~~~~~~~~~~~~ 328 (425)
T 1r5m_A 264 SASDDGTLRIWHGGNGNSQNCFYGHS--------QSIVSASWVGDD-KVISCSMDG------SVRLWSLKQNTLLALSIV 328 (425)
T ss_dssp EEETTSCEEEECSSSBSCSEEECCCS--------SCEEEEEEETTT-EEEEEETTS------EEEEEETTTTEEEEEEEC
T ss_pred EEcCCCEEEEEECCCCccceEecCCC--------ccEEEEEECCCC-EEEEEeCCC------cEEEEECCCCcEeEeccc
Confidence 99999999999999988877775443 489999999999 777666553 899999999999988999
Q ss_pred CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc--------------------eecc--------eeeeEEEccchhh
Q psy7108 250 PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY--------------------VFDP--------FLLDISITPQSVK 300 (703)
Q Consensus 250 h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~--------------------~~~~--------~~~~~~~spd~~~ 300 (703)
|...|.+++|+|++++|++++.|| |++|++.++. .... ...+++|+|++
T Consensus 329 ~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~-- 406 (425)
T 1r5m_A 329 DGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDLSWNCAG-- 406 (425)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEEEECTTS--
T ss_pred CCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEEEccCCC--
Confidence 999999999999999999999999 9999998776 3221 45679999999
Q ss_pred hHhhcCCcceEEEEEEecC
Q psy7108 301 EALADKDYAKALMMSLKLN 319 (703)
Q Consensus 301 ~~l~sg~~~~~l~la~~l~ 319 (703)
..+++++.++.+.+ |++.
T Consensus 407 ~~l~~~~~dg~i~i-w~~~ 424 (425)
T 1r5m_A 407 NKISVAYSLQEGSV-VAIP 424 (425)
T ss_dssp SEEEEEESSSCCEE-EECC
T ss_pred ceEEEEecCceEEE-Eeec
Confidence 78889999999988 8764
No 53
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.95 E-value=1.4e-26 Score=242.69 Aligned_cols=239 Identities=12% Similarity=0.185 Sum_probs=202.8
Q ss_pred cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee---EEEe--cCCCcEEEEEEecCCCEEEEEECCCeEE
Q psy7108 42 VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ---HETI--QLLSDALCVAYKPDGTEIVVATLDGQLI 116 (703)
Q Consensus 42 ~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~---~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~ 116 (703)
...+|.++|++++|+| ++++|++++ ||.|++||+.+++.. .... .|...|.+++|+|+++.|++++.|+.|+
T Consensus 46 ~~~~h~~~v~~~~~~~--~~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~ 122 (337)
T 1gxr_A 46 NTLNHGEVVCAVTISN--PTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLS 122 (337)
T ss_dssp EEECCSSCCCEEEECS--SSSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEE
T ss_pred eeccCCCceEEEEEec--CCcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEE
Confidence 3458999999999999 999999999 999999999876532 2222 6889999999999999999999999999
Q ss_pred EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108 117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTIT 194 (703)
Q Consensus 117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~ 194 (703)
+||+++++ ....+..+.. .+.+++|+|+++++++++.|+.|++||+++++.+..+..+
T Consensus 123 ~~d~~~~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~~~~~~~~~~~ 182 (337)
T 1gxr_A 123 IWDLAAPTPRIKAELTSSAP--------------------ACYALAISPDSKVCFSCCSDGNIAVWDLHNQTLVRQFQGH 182 (337)
T ss_dssp EEECCCC--EEEEEEECSSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred EEECCCCCcceeeecccCCC--------------------ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCceeeeeecc
Confidence 99999887 4455555543 7999999999999999999999999999999888877644
Q ss_pred cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-
Q psy7108 195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG- 273 (703)
Q Consensus 195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg- 273 (703)
. ..+.+++|+|+++.+++++.++ .+++||+++++..... .+...+.+++|+|+++++++++.++
T Consensus 183 ~--------~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~~~~ 247 (337)
T 1gxr_A 183 T--------DGASCIDISNDGTKLWTGGLDN------TVRSWDLREGRQLQQH-DFTSQIFSLGYCPTGEWLAVGMESSN 247 (337)
T ss_dssp S--------SCEEEEEECTTSSEEEEEETTS------EEEEEETTTTEEEEEE-ECSSCEEEEEECTTSSEEEEEETTSC
T ss_pred c--------CceEEEEECCCCCEEEEEecCC------cEEEEECCCCceEeee-cCCCceEEEEECCCCCEEEEEcCCCc
Confidence 3 4899999999999999887664 8999999998876655 4677899999999999999999999
Q ss_pred EEEEEcCCCceec-----ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 274 VHIYSLDSGYVFD-----PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 274 v~iwd~~~~~~~~-----~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+++|++.+++... .....++|+|++ ..+++++.++.+.+ |++...
T Consensus 248 i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~i~~-~~~~~~ 297 (337)
T 1gxr_A 248 VEVLHVNKPDKYQLHLHESCVLSLKFAYCG--KWFVSTGKDNLLNA-WRTPYG 297 (337)
T ss_dssp EEEEETTSSCEEEECCCSSCEEEEEECTTS--SEEEEEETTSEEEE-EETTTC
T ss_pred EEEEECCCCCeEEEcCCccceeEEEECCCC--CEEEEecCCCcEEE-EECCCC
Confidence 9999998876532 224679999999 78899999999998 988654
No 54
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.95 E-value=5.8e-27 Score=248.03 Aligned_cols=258 Identities=12% Similarity=0.186 Sum_probs=206.6
Q ss_pred ceeecc-CCCccccccccCCCcCeEEEEEcCCCC---CCEEEEEeCCCcEEEEEcCCCc-eeEEEecCCCcEEEEEE---
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLS---STGMVSASWDKTVKLWNAVETD-TQHETIQLLSDALCVAY--- 99 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~d---g~~L~sgs~Dg~V~iWd~~~~~-~~~~~~~~~~~V~~v~~--- 99 (703)
+++|+. +++.. .....+|.++|++++|+| + +.+|++|+.||.|++||+.+++ ....+..|...|.+++|
T Consensus 46 v~iw~~~~~~~~-~~~~~~~~~~v~~~~~~~--~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~ 122 (357)
T 3i2n_A 46 IQLYEIQHGDLK-LLREIEKAKPIKCGTFGA--TSLQQRYLATGDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGG 122 (357)
T ss_dssp EEEEEECSSSEE-EEEEEEESSCEEEEECTT--CCTTTCCEEEEETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESG
T ss_pred EEEEeCCCCccc-ceeeecccCcEEEEEEcC--CCCCCceEEEecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccc
Confidence 556663 44443 122347999999999999 7 6999999999999999999887 66777789999999954
Q ss_pred ---ecCCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEE----EcCCCCEEEEE
Q psy7108 100 ---KPDGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC----YSADGSCILAA 171 (703)
Q Consensus 100 ---spdg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~----~spdg~~l~s~ 171 (703)
+|+++.|++++.|+.|++||+++++ .+..+..+... +...+.+++ |+|++++++++
T Consensus 123 ~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~----------------~~~~v~~~~~~~~~~~~~~~l~~~ 186 (357)
T 3i2n_A 123 LGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGE----------------NKRDCWTVAFGNAYNQEERVVCAG 186 (357)
T ss_dssp GGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTS----------------CCCCEEEEEEECCCC-CCCEEEEE
T ss_pred cccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCC----------------CCCceEEEEEEeccCCCCCEEEEE
Confidence 6899999999999999999999886 56666554321 123688888 78999999999
Q ss_pred ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc---CCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108 172 GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE---FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL 248 (703)
Q Consensus 172 s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp---dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~ 248 (703)
+.|+.|++||+++++...... +...+.+++|+| ++..+++++.++ .|++||+++++....+.
T Consensus 187 ~~d~~i~i~d~~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~ 251 (357)
T 3i2n_A 187 YDNGDIKLFDLRNMALRWETN---------IKNGVCSLEFDRKDISMNKLVATSLEG------KFHVFDMRTQHPTKGFA 251 (357)
T ss_dssp ETTSEEEEEETTTTEEEEEEE---------CSSCEEEEEESCSSSSCCEEEEEESTT------EEEEEEEEEEETTTEEE
T ss_pred ccCCeEEEEECccCceeeecC---------CCCceEEEEcCCCCCCCCEEEEECCCC------eEEEEeCcCCCccccee
Confidence 999999999999988754422 334899999999 899998887664 89999999887766655
Q ss_pred -----CCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCCcee-------------------------cceeeeEEEcc
Q psy7108 249 -----KPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSGYVF-------------------------DPFLLDISITP 296 (703)
Q Consensus 249 -----~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~~~~-------------------------~~~~~~~~~sp 296 (703)
.|...|.+++|+|+++ ++++++.|| |++|++.++... .....+++|+|
T Consensus 252 ~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~ 331 (357)
T 3i2n_A 252 SVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSP 331 (357)
T ss_dssp EEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECS
T ss_pred eeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcC
Confidence 8999999999999998 799999999 999998764321 12236799999
Q ss_pred chhhhHhh-cCCcceEEEEEEecCchh
Q psy7108 297 QSVKEALA-DKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 297 d~~~~~l~-sg~~~~~l~la~~l~~~~ 322 (703)
++ ..++ +++.++.+++ |++....
T Consensus 332 ~~--~~l~~s~~~d~~i~i-w~~~~~~ 355 (357)
T 3i2n_A 332 DK--RGLCVCSSFDQTVRV-LIVTKLN 355 (357)
T ss_dssp SS--TTEEEEEETTSEEEE-EEECC--
T ss_pred CC--CeEEEEecCCCcEEE-EECCCcc
Confidence 99 7787 8999999999 9987654
No 55
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.95 E-value=1.1e-26 Score=252.50 Aligned_cols=273 Identities=13% Similarity=0.163 Sum_probs=208.6
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|| .++++. ..+.+|.+.|++++|+| ++++|++|+.|++|++||+.+++....+..|...|.+++|+|+++.|
T Consensus 121 i~iwd~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~s~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l 196 (420)
T 3vl1_A 121 IKVLDSNFNLQR--EIDQAHVSEITKLKFFP--SGEALISSSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNV 196 (420)
T ss_dssp EEEECTTSCEEE--EETTSSSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEE
T ss_pred EEEEeCCCccee--eecccccCccEEEEECC--CCCEEEEEeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEE
Confidence 66677 356666 77889999999999999 99999999999999999999988888888899999999999999999
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCC----ccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDT----DLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS 182 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~ 182 (703)
++++.|+.|++||+++++.+..+..+.......... .........+...+.+++|+|++++|++++.|+.|++||+
T Consensus 197 ~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~ 276 (420)
T 3vl1_A 197 LSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNV 276 (420)
T ss_dssp EEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEET
T ss_pred EEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEEC
Confidence 999999999999999999998887654311100000 0000011223456777788999999999999999999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCcc-ceeecC-CccceEEEEE
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDM-AARVLK-PEVRVFCVKF 259 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~-~~~~~~-h~~~V~~l~~ 259 (703)
++++....+.. ++...+.+++|+|+++ ++++++.++ .|++||+++++. +..+.. |...|.++.+
T Consensus 277 ~~~~~~~~~~~-------~~~~~v~~~~~~~~~~~~l~~g~~dg------~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~ 343 (420)
T 3vl1_A 277 FSKEQTIQLPS-------KFTCSCNSLTVDGNNANYIYAGYENG------MLAQWDLRSPECPVGEFLINEGTPINNVYF 343 (420)
T ss_dssp TTCCEEEEECC-------TTSSCEEEEEECSSCTTEEEEEETTS------EEEEEETTCTTSCSEEEEESTTSCEEEEEE
T ss_pred CCCceeEEccc-------ccCCCceeEEEeCCCCCEEEEEeCCC------eEEEEEcCCCcCchhhhhccCCCCceEEEe
Confidence 99887776642 2445899999999999 777777654 899999998754 556665 6677888854
Q ss_pred cCCCCEEEEEeCCC-EEEEEcCCCcee---------------cceeeeEEEccchhh--hHhhcCCcceEEEEEEecCc
Q psy7108 260 SPTGQAWVAATTEG-VHIYSLDSGYVF---------------DPFLLDISITPQSVK--EALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 260 spdg~~l~s~s~Dg-v~iwd~~~~~~~---------------~~~~~~~~~spd~~~--~~l~sg~~~~~l~la~~l~~ 320 (703)
|++++|++++.|+ |++|++...... .....+++|+|++.. .+++.|+ ++.+.+ |++.+
T Consensus 344 -~~~~~l~s~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~g~l~a~g~-~g~~~~-~~~~~ 419 (420)
T 3vl1_A 344 -AAGALFVSSGFDTSIKLDIISDPESERPAIEFETPTFLVSNDDAVSQFCYVSDDESNGEVLEVGK-NNFCAL-YNLSN 419 (420)
T ss_dssp -ETTEEEEEETTTEEEEEEEECCTTCCSCEECTTSCEEECCSSCCCCEEEEECCSSSSCEEEEEET-TTEEEE-EESCC
T ss_pred -CCCCEEEEecCCccEEEEeccCCCCCccceeccCccEEccCCcceEEEEEccCCCCcceEEEEcC-CceEEE-EeccC
Confidence 5788999999999 999998764221 112356899999820 1455554 455555 77654
No 56
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.95 E-value=7.7e-27 Score=248.78 Aligned_cols=246 Identities=13% Similarity=0.105 Sum_probs=205.1
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF 118 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw 118 (703)
..+..|.++|++++|+| ++++|++|+.|+.|++||+.+++ ....+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 2 ~~~~~~~~~i~~~~~s~--~~~~l~~~~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vw 79 (372)
T 1k8k_C 2 AYHSFLVEPISCHAWNK--DRTQIAICPNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVW 79 (372)
T ss_dssp CEEESCSSCCCEEEECT--TSSEEEEECSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEE
T ss_pred ceecccCCCeEEEEECC--CCCEEEEEeCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEE
Confidence 45677999999999999 99999999999999999998876 666677899999999999999999999999999999
Q ss_pred EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108 119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
|+++++........ .|...|.+++|+|++++|++++.|+.|++||++.+.........
T Consensus 80 d~~~~~~~~~~~~~------------------~~~~~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~---- 137 (372)
T 1k8k_C 80 TLKGRTWKPTLVIL------------------RINRAARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHI---- 137 (372)
T ss_dssp EEETTEEEEEEECC------------------CCSSCEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEE----
T ss_pred ECCCCeeeeeEEee------------------cCCCceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeee----
Confidence 99888765544321 12348999999999999999999999999999987642222111
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC------------------CCccceeecCCccceEEEEEc
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK------------------KGDMAARVLKPEVRVFCVKFS 260 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~------------------~~~~~~~~~~h~~~V~~l~~s 260 (703)
..++...+.+++|+|+++.+++++.++ .+++||++ .++....+..|...|.+++|+
T Consensus 138 ~~~~~~~i~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 211 (372)
T 1k8k_C 138 KKPIRSTVLSLDWHPNSVLLAAGSCDF------KCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFS 211 (372)
T ss_dssp CTTCCSCEEEEEECTTSSEEEEEETTS------CEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECCCCSSCEEEEEEC
T ss_pred ecccCCCeeEEEEcCCCCEEEEEcCCC------CEEEEEcccccccccccccccccccchhhheEecCCCCCeEEEEEEC
Confidence 123456899999999999999887664 79999953 567777788899999999999
Q ss_pred CCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 261 PTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
|++++|++++.|+ |++||+.+++....+ ...++|+|++ .+++++ .++.+.+ |++..
T Consensus 212 ~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~-~d~~i~i-~~~~~ 274 (372)
T 1k8k_C 212 ANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLLAVTFITES--SLVAAG-HDCFPVL-FTYDS 274 (372)
T ss_dssp SSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEEEEEEEETT--EEEEEE-TTSSCEE-EEEET
T ss_pred CCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeEEEEEecCC--CEEEEE-eCCeEEE-EEccC
Confidence 9999999999999 999999988775444 3678999999 677777 7888887 88765
No 57
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=2e-28 Score=262.36 Aligned_cols=239 Identities=15% Similarity=0.121 Sum_probs=189.3
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--ceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF 118 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw 118 (703)
..+..|.++|++++|+| ++++|++|+.|+.|++||+.++ .....+..|...|.+++|+|++++|++++.|+.|++|
T Consensus 5 ~~~~~~~~~v~~~~~s~--~g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vw 82 (377)
T 3dwl_C 5 QVLHILPKPSYEHAFNS--QRTEFVTTTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVY 82 (377)
T ss_dssp EEEEECSSCCSCCEECS--SSSEEECCCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC
T ss_pred eeEecCCCcEEEEEECC--CCCEEEEecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEE
Confidence 44556788999999999 9999999999999999999877 4555666799999999999999999999999999999
Q ss_pred EcCCCc---EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce---EEEEE
Q psy7108 119 DVESAA---QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL---LKKFT 192 (703)
Q Consensus 119 d~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~---~~~~~ 192 (703)
|+++++ ....+..|. ..|.+++|+|+++.|++++.|+.|++||+++++. ...+.
T Consensus 83 d~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~ 142 (377)
T 3dwl_C 83 EKRPDGTWKQTLVLLRLN--------------------RAATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK 142 (377)
T ss_dssp ------CCCCEEECCCCS--------------------SCEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC
T ss_pred EcCCCCceeeeeEecccC--------------------CceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee
Confidence 999876 444454544 4899999999999999999999999999998763 45544
Q ss_pred eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC------------------CCccceeecCCccce
Q psy7108 193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK------------------KGDMAARVLKPEVRV 254 (703)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~------------------~~~~~~~~~~h~~~V 254 (703)
. .|...|.+++|+|+++.+++++.++ .|++||+. .+++...+ .|...|
T Consensus 143 ~-------~h~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v 208 (377)
T 3dwl_C 143 R-------PLRSTILSLDWHPNNVLLAAGCADR------KAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEY-PSGGWV 208 (377)
T ss_dssp S-------SCCSCEEEEEECTTSSEEEEEESSS------CEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECC-CCSSSE
T ss_pred c-------ccCCCeEEEEEcCCCCEEEEEeCCC------EEEEEEEEecccCCCccccccccccchhhhhhcc-cCCceE
Confidence 3 1455899999999999999888764 79999985 24455555 899999
Q ss_pred EEEEEcCCCCEEEEEeCCC-EEEEEcCCCce----ecce------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYV----FDPF------LLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~----~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
.+++|+|++++|++++.|+ |++||+.+++. ...+ ..+++|+|++ .++++++.++.+. |...
T Consensus 209 ~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~~~~~~~~--~~~~ 280 (377)
T 3dwl_C 209 HAVGFSPSGNALAYAGHDSSVTIAYPSAPEQPPRALITVKLSQLPLRSLLWANES--AIVAAGYNYSPIL--LQGN 280 (377)
T ss_dssp EEEEECTTSSCEEEEETTTEEC-CEECSTTSCEEECCCEECSSSCEEEEEEEETT--EEEEEESSSSEEE--ECCC
T ss_pred EEEEECCCCCEEEEEeCCCcEEEEECCCCCCcceeeEeecCCCCceEEEEEcCCC--CEEEEEcCCcEEE--EEeC
Confidence 9999999999999999999 99999998876 3333 3679999999 7888888777664 4443
No 58
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.7e-26 Score=250.28 Aligned_cols=245 Identities=13% Similarity=0.233 Sum_probs=205.4
Q ss_pred cCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEc----CCCc------eeEEEec----------CCCcEEEEEEecC
Q psy7108 44 SGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNA----VETD------TQHETIQ----------LLSDALCVAYKPD 102 (703)
Q Consensus 44 ~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~----~~~~------~~~~~~~----------~~~~V~~v~~spd 102 (703)
..|.++|++++|+| +++ +|++|+.||.|++|++ .+++ ....+.. |.+.|.+++|+|+
T Consensus 42 ~~~~~~v~~~~~s~--~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~ 119 (425)
T 1r5m_A 42 IVKLDNIVSSTWNP--LDESILAYGEKNSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWSHD 119 (425)
T ss_dssp EEECSCCSEEEECS--SCTTEEEEEETBTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEECTT
T ss_pred eeccCceEEEEECC--CCCcEEEEecCCceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEcCC
Confidence 34669999999999 999 9999999999999999 8776 3333333 5669999999999
Q ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEEC
Q psy7108 103 GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSS 182 (703)
Q Consensus 103 g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~ 182 (703)
+++|++++.||.|++|| .+++.+..+..|.. .|.+++|+|++++|++++.|+.|++||+
T Consensus 120 ~~~l~~~~~dg~i~i~~-~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~l~~~~~d~~i~iwd~ 178 (425)
T 1r5m_A 120 GNSIVTGVENGELRLWN-KTGALLNVLNFHRA--------------------PIVSVKWNKDGTHIISMDVENVTILWNV 178 (425)
T ss_dssp SSEEEEEETTSCEEEEE-TTSCEEEEECCCCS--------------------CEEEEEECTTSSEEEEEETTCCEEEEET
T ss_pred CCEEEEEeCCCeEEEEe-CCCCeeeeccCCCc--------------------cEEEEEECCCCCEEEEEecCCeEEEEEC
Confidence 99999999999999999 67778888877654 8999999999999999999999999999
Q ss_pred CCCceEEEEEeccCC------------------------------------------------ccccccccceeeeeccC
Q psy7108 183 REGILLKKFTITQNK------------------------------------------------SLDGINDFINRRKMTEF 214 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~------------------------------------------------~~~~~~~~v~~~~~spd 214 (703)
++++.+..+..+... .+.++...+.+++|+|+
T Consensus 179 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~ 258 (425)
T 1r5m_A 179 ISGTVMQHFELKETGGSSINAENHSGDGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT 258 (425)
T ss_dssp TTTEEEEEECCC---------------CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT
T ss_pred CCCcEEEEeeccccCccceeeccccCCcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC
Confidence 998887766543321 22356678999999999
Q ss_pred CCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----
Q psy7108 215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF----- 288 (703)
Q Consensus 215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~----- 288 (703)
++.+++++.++ .|++||+++++....+..|...|.+++|+|++ .+++++.|+ |++||+.+++....+
T Consensus 259 ~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~ 331 (425)
T 1r5m_A 259 NKLLLSASDDG------TLRIWHGGNGNSQNCFYGHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQNTLLALSIVDGV 331 (425)
T ss_dssp TTEEEEEETTS------CEEEECSSSBSCSEEECCCSSCEEEEEEETTT-EEEEEETTSEEEEEETTTTEEEEEEECTTC
T ss_pred CCEEEEEcCCC------EEEEEECCCCccceEecCCCccEEEEEECCCC-EEEEEeCCCcEEEEECCCCcEeEecccCCc
Confidence 99988887664 79999999999998998999999999999999 999999999 999999988775444
Q ss_pred -eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 289 -LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 289 -~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
...++|+|++ ..+++++.++.+.+ |++...
T Consensus 332 ~i~~~~~s~~~--~~l~~~~~dg~i~i-~~~~~~ 362 (425)
T 1r5m_A 332 PIFAGRISQDG--QKYAVAFMDGQVNV-YDLKKL 362 (425)
T ss_dssp CEEEEEECTTS--SEEEEEETTSCEEE-EECHHH
T ss_pred cEEEEEEcCCC--CEEEEEECCCeEEE-EECCCC
Confidence 3578999999 78999999999998 887644
No 59
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.95 E-value=2.4e-26 Score=246.88 Aligned_cols=247 Identities=9% Similarity=0.128 Sum_probs=198.1
Q ss_pred ceeecc-CCCccccccc--cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC---CCcEEEEEEec
Q psy7108 28 VKKGDM-AARVLKPEVL--SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL---LSDALCVAYKP 101 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l--~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~---~~~V~~v~~sp 101 (703)
+++||. +++.. ..+ .+|.+.|.+++|+|. ++++|++++.|+.|++||+.+ ........+ ...|.+++|+|
T Consensus 98 i~iwd~~~~~~~--~~~~~~~h~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~ 173 (383)
T 3ei3_B 98 IILWDYDVQNKT--SFIQGMGPGDAITGMKFNQF-NTNQLFVSSIRGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSV 173 (383)
T ss_dssp EEEEETTSTTCE--EEECCCSTTCBEEEEEEETT-EEEEEEEEETTTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEET
T ss_pred EEEEeCCCcccc--eeeecCCcCCceeEEEeCCC-CCCEEEEEeCCCEEEEEECCC-CceEEEeccCCCCCCeEEEEECC
Confidence 677774 44554 444 479999999999993 468999999999999999986 355555443 47899999999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEE
Q psy7108 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIY 180 (703)
Q Consensus 102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lw 180 (703)
+++.|++++.|+.|++||+ +++.+..+.+|.. .|.+++|+|+++ ++++++.|+.|++|
T Consensus 174 ~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~--------------------~v~~~~~~~~~~~~l~s~~~d~~i~iw 232 (383)
T 3ei3_B 174 SRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKA--------------------KVTHAEFNPRCDWLMATSSVDATVKLW 232 (383)
T ss_dssp TTTEEEEEETTSEEEEEET-TSCEEEEEECSSS--------------------CEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred CCCEEEEECCCCCEEEEEC-CCCEEEEeccCCC--------------------cEEEEEECCCCCCEEEEEeCCCEEEEE
Confidence 9999999999999999999 5777788877655 899999999999 99999999999999
Q ss_pred ECCC----CceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc----
Q psy7108 181 SSRE----GILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE---- 251 (703)
Q Consensus 181 D~~~----~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~---- 251 (703)
|+++ +.++..+. +...|.+++|+| +++.+++++.++ .|++||+++++....+..|.
T Consensus 233 d~~~~~~~~~~~~~~~---------~~~~v~~~~~s~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~ 297 (383)
T 3ei3_B 233 DLRNIKDKNSYIAEMP---------HEKPVNAAYFNPTDSTKLLTTDQRN------EIRVYSSYDWSKPDQIIIHPHRQF 297 (383)
T ss_dssp EGGGCCSTTCEEEEEE---------CSSCEEEEEECTTTSCEEEEEESSS------EEEEEETTBTTSCSEEEECCBCCC
T ss_pred eCCCCCcccceEEEec---------CCCceEEEEEcCCCCCEEEEEcCCC------cEEEEECCCCcccccccccccccc
Confidence 9998 55665552 334899999999 999999887764 89999999987766655432
Q ss_pred -------------cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee--------eeEEEccchhhhHhhcCCcc
Q psy7108 252 -------------VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL--------LDISITPQSVKEALADKDYA 309 (703)
Q Consensus 252 -------------~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~--------~~~~~spd~~~~~l~sg~~~ 309 (703)
..+..++|+|++++ +++.|+ |++||+.+++....+. ..++|+|++ .++++++ +
T Consensus 298 ~~~~~~~~~~~p~~~~~~~~~s~dg~~--s~s~d~~i~iwd~~~~~~~~~l~~~~~~~~~~~~~~s~~g--~~l~s~s-d 372 (383)
T 3ei3_B 298 QHLTPIKATWHPMYDLIVAGRYPDDQL--LLNDKRTIDIYDANSGGLVHQLRDPNAAGIISLNKFSPTG--DVLASGM-G 372 (383)
T ss_dssp TTSCCCCCEECSSSSEEEEECBCCTTT--CTTCCCCEEEEETTTCCEEEEECBTTBCSCCCEEEECTTS--SEEEEEE-T
T ss_pred ccccceEEeccCCCCceEEEecCCccc--ccCCCCeEEEEecCCCceeeeecCCCCCceEEEEEEecCc--cEEEEec-C
Confidence 33445666777766 777889 9999999988755443 335999999 7888886 8
Q ss_pred eEEEEEEecCc
Q psy7108 310 KALMMSLKLNE 320 (703)
Q Consensus 310 ~~l~la~~l~~ 320 (703)
+.+++ |++++
T Consensus 373 ~~i~i-w~~~~ 382 (383)
T 3ei3_B 373 FNILI-WNRED 382 (383)
T ss_dssp TEEEE-EECC-
T ss_pred CcEEE-EecCC
Confidence 99998 98864
No 60
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.5e-27 Score=266.47 Aligned_cols=244 Identities=10% Similarity=0.075 Sum_probs=189.2
Q ss_pred cccCCceEEecCCceeeccCCCcc--ccccccCCCcCeEEEEEcCCCC------CCEEEEEeCCCcEEEEEcCCCce---
Q psy7108 15 THEGGNVVLKLPGVKKGDMAARVL--KPEVLSGHEGPVSCIEFSPVLS------STGMVSASWDKTVKLWNAVETDT--- 83 (703)
Q Consensus 15 ~~~~~~~~i~~~~v~~~d~tg~~~--~~~~l~gH~~~V~~l~~sp~~d------g~~L~sgs~Dg~V~iWd~~~~~~--- 83 (703)
+..+.+..+++|++. ++++. ...++.+|.+.|.+++|+| + +.+||+|+.||+|++||+.++..
T Consensus 177 aS~s~D~tI~iWd~~----~~~~~~~~~~~l~~~~~~V~~v~wsp--~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~ 250 (524)
T 2j04_B 177 DKEKHSSCIQIFKMN----TSTLHCVKVQTIVHSFGEVWDLKWHE--GCHAPHLVGCLSFVSQEGTINFLEIIDNATDVH 250 (524)
T ss_dssp -----CEEEEEEEEE----TTTCCEEEEEEEEECCCSEEEEEECS--SCCCSSSSCEEEEEETTSCEEEEECCCCSSSSS
T ss_pred ccCCCCceEEEEEcc----CCCCCceEEEEEEecCCcEEEEEECC--CCCCCCCCceEEEEecCCeEEEEEcCCCccccc
Confidence 445566777777654 33321 0034678899999999999 5 57999999999999999976532
Q ss_pred --------eEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCc
Q psy7108 84 --------QHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAK 154 (703)
Q Consensus 84 --------~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (703)
...+..|...|.+++|+|++ .|++|+.||+|++||+++++ ....+.+|..
T Consensus 251 ~~~~~~~p~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~H~~-------------------- 309 (524)
T 2j04_B 251 VFKMCEKPSLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQVHDS-------------------- 309 (524)
T ss_dssp EEECCCSCSEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEECSSS--------------------
T ss_pred cceeecCceEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEeecccc--------------------
Confidence 12445688999999999864 89999999999999998763 3345666554
Q ss_pred cEEEE--EEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108 155 AVSTV--CYSADG-SCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNV 231 (703)
Q Consensus 155 ~V~~i--~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 231 (703)
.|.++ +|+|++ ++|++|+.|++|++||++++++..++..+... ..|.+++|+|+++.+++++.++
T Consensus 310 ~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~------~~v~~v~fsp~~~~l~s~~~d~------ 377 (524)
T 2j04_B 310 YILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRG------SNLVPVVYCPQIYSYIYSDGAS------ 377 (524)
T ss_dssp CEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSC------CSCCCEEEETTTTEEEEECSSS------
T ss_pred cEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCccccccccccc------CcccceEeCCCcCeEEEeCCCC------
Confidence 89999 578888 89999999999999999998877666554320 1477899999999888776653
Q ss_pred EEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-----------eeeeEEEccch
Q psy7108 232 VLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-----------FLLDISITPQS 298 (703)
Q Consensus 232 ~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-----------~~~~~~~spd~ 298 (703)
.|++||++++.+...+.+|...|++++|||+|+.|++|+.|+ |++|++..+ .+.. ...+++|+|++
T Consensus 378 tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~~-~~~~~~~~~~~~~~~~v~~v~~sp~g 455 (524)
T 2j04_B 378 SLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAARR-LLHGIKNSSATQKSLRLWKWDYSIKD 455 (524)
T ss_dssp EEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCSS-TTTCC------CCCCEEEECBCCSSS
T ss_pred cEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechHh-hccccccCccceeeeEEEEeccCCCC
Confidence 899999999988888889999999999999999999999999 999997653 2211 12466777776
No 61
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.95 E-value=2.1e-27 Score=260.38 Aligned_cols=210 Identities=12% Similarity=0.133 Sum_probs=167.9
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee--EEEecCCCcEEEEEEec-CCCEEEEEECCCeEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ--HETIQLLSDALCVAYKP-DGTEIVVATLDGQLIM 117 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~--~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~v 117 (703)
+...+|...|+|++|+|. ++++||+|+.||+|+|||+.+++.. ....+|.+.|++++|+| ++++|++|+.||+|++
T Consensus 113 ~~~~~~~~~V~~l~~~P~-~~~~lasGs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~i 191 (435)
T 4e54_B 113 QKAAPFDRRATSLAWHPT-HPSTVAVGSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRL 191 (435)
T ss_dssp CEEEECSSCEEEEEECSS-CTTCEEEEETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEE
T ss_pred ccCCCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEE
Confidence 455689999999999994 5679999999999999999876543 33456999999999998 6889999999999999
Q ss_pred EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108 118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK 197 (703)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~ 197 (703)
||++++........+. +...+.+++|+|++++|++|+.||.|++||++.. .+..
T Consensus 192 wd~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~~-~~~~------- 245 (435)
T 4e54_B 192 QDFKGNILRVFASSDT------------------INIWFCSLDVSASSRMVVTGDNVGNVILLNMDGK-ELWN------- 245 (435)
T ss_dssp EETTSCEEEEEECCSS------------------CSCCCCCEEEETTTTEEEEECSSSBEEEEESSSC-BCCC-------
T ss_pred eeccCCceeEEeccCC------------------CCccEEEEEECCCCCEEEEEeCCCcEeeeccCcc-eeEE-------
Confidence 9998765433332222 1235788999999999999999999999998753 3333
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee---ecCCccceEEEEEcCCCCEEEEEeCCC-
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR---VLKPEVRVFCVKFSPTGQAWVAATTEG- 273 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~---~~~h~~~V~~l~~spdg~~l~s~s~Dg- 273 (703)
+.+|...|.+++|+|++..++++++.+ ..|++||+++.+.... ..+|...|++++|+|+|++|++++.|+
T Consensus 246 -~~~h~~~v~~v~~~p~~~~~~~s~s~d-----~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~spdg~~l~s~~~D~~ 319 (435)
T 4e54_B 246 -LRMHKKKVTHVALNPCCDWFLATASVD-----QTVKIWDLRQVRGKASFLYSLPHRHPVNAACFSPDGARLLTTDQKSE 319 (435)
T ss_dssp -SBCCSSCEEEEEECTTCSSEEEEEETT-----SBCCEEETTTCCSSSCCSBCCBCSSCEEECCBCTTSSEEEEEESSSC
T ss_pred -EecccceEEeeeecCCCceEEEEecCc-----ceeeEEecccccccceEEEeeeccccccceeECCCCCeeEEEcCCCE
Confidence 345666999999999998655444322 3799999988764433 346899999999999999999999999
Q ss_pred EEEEEcCCCc
Q psy7108 274 VHIYSLDSGY 283 (703)
Q Consensus 274 v~iwd~~~~~ 283 (703)
|+||++.++.
T Consensus 320 i~iwd~~~~~ 329 (435)
T 4e54_B 320 IRVYSASQWD 329 (435)
T ss_dssp EEEEESSSSS
T ss_pred EEEEECCCCc
Confidence 9999987654
No 62
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.8e-27 Score=255.89 Aligned_cols=266 Identities=15% Similarity=0.212 Sum_probs=212.4
Q ss_pred eeccCCCccccccc-cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC---Cce--eEEEecCCCcEEEEEEecCC
Q psy7108 30 KGDMAARVLKPEVL-SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE---TDT--QHETIQLLSDALCVAYKPDG 103 (703)
Q Consensus 30 ~~d~tg~~~~~~~l-~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~---~~~--~~~~~~~~~~V~~v~~spdg 103 (703)
.|+.+|+++ ..+ .+|.++|++++|+|. ++++|++|+.||+|++||+.+ +.. ......|...|.+++|+|++
T Consensus 47 ~w~~~g~~~--~~~~~~h~~~V~~~~~s~~-~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~ 123 (437)
T 3gre_A 47 MGNLRGKLI--ATLMENEPNSITSSAVSPG-ETPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNF 123 (437)
T ss_dssp GGGCCCCEE--EEECTTTTSCEEEEEEECS-SSCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTS
T ss_pred cccccceEE--eeeccCCCCceEEEEECCC-CCCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCC
Confidence 478889998 888 999999999999994 688999999999999999876 321 23344699999999999999
Q ss_pred CEEEEEECCCeEEEEEcC---CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE--EcCCCCEEEEEecCCcEE
Q psy7108 104 TEIVVATLDGQLIMFDVE---SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC--YSADGSCILAAGQSKYIC 178 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~--~spdg~~l~s~s~dg~I~ 178 (703)
+.|++++.||.|++||++ +++....+..+.- .........+...+.++. ++++++.|++++.|+.|+
T Consensus 124 ~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i--------~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~ 195 (437)
T 3gre_A 124 DAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECI--------RKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVI 195 (437)
T ss_dssp SEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEE--------EEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEE
T ss_pred CEEEEEeCCCEEEEEEeccccCCceeecccccee--------EEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEE
Confidence 999999999999999995 6666665554310 000000111445677777 678999999999999999
Q ss_pred EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEE
Q psy7108 179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCV 257 (703)
Q Consensus 179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l 257 (703)
+||+++++++..+..+. |...|.+++|+|+++.+++++.++ .|++||+++++++..+. .|...|.++
T Consensus 196 iwd~~~~~~~~~~~~~~------h~~~v~~~~~s~~~~~l~s~~~dg------~i~iwd~~~~~~~~~~~~~~~~~v~~~ 263 (437)
T 3gre_A 196 IFDIRTLERLQIIENSP------RHGAVSSICIDEECCVLILGTTRG------IIDIWDIRFNVLIRSWSFGDHAPITHV 263 (437)
T ss_dssp EEETTTCCEEEEEECCG------GGCCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEEBCTTCEEEEEE
T ss_pred EEeCCCCeeeEEEccCC------CCCceEEEEECCCCCEEEEEcCCC------eEEEEEcCCccEEEEEecCCCCceEEE
Confidence 99999999998887521 334899999999999999888764 89999999998887775 788899999
Q ss_pred EEc----CCCCEEEEEeCCC-EEEEEcCCCceeccee--------------------------------eeEEEccchhh
Q psy7108 258 KFS----PTGQAWVAATTEG-VHIYSLDSGYVFDPFL--------------------------------LDISITPQSVK 300 (703)
Q Consensus 258 ~~s----pdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~--------------------------------~~~~~spd~~~ 300 (703)
+|+ |++++|++++.|+ |++||+.+++....+. .+++|+ ++
T Consensus 264 ~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~-- 340 (437)
T 3gre_A 264 EVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-ND-- 340 (437)
T ss_dssp EECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TT--
T ss_pred EeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-Cc--
Confidence 665 4678999999999 9999999887543332 335666 45
Q ss_pred hHhhcCCcceEEEEEEecCchh
Q psy7108 301 EALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 301 ~~l~sg~~~~~l~la~~l~~~~ 322 (703)
.++++++.|+.+++ |++....
T Consensus 341 ~~l~s~~~d~~i~~-wd~~~~~ 361 (437)
T 3gre_A 341 KILLTDEATSSIVM-FSLNELS 361 (437)
T ss_dssp EEEEEEGGGTEEEE-EETTCGG
T ss_pred eEEEecCCCCeEEE-EECCCcc
Confidence 67889999999999 9988664
No 63
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.95 E-value=6.5e-27 Score=253.54 Aligned_cols=252 Identities=9% Similarity=0.173 Sum_probs=205.5
Q ss_pred cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC----CceeEEEecCCCcEEEEEEecC-CCEEEEEECCCeEEEE
Q psy7108 44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE----TDTQHETIQLLSDALCVAYKPD-GTEIVVATLDGQLIMF 118 (703)
Q Consensus 44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~----~~~~~~~~~~~~~V~~v~~spd-g~~las~s~dg~I~vw 118 (703)
..|...|++++|+| ++.+|++|+.||.|++||+.+ ......+..|...|.+++|+|+ +++|++++.|+.|++|
T Consensus 64 ~~~~~~v~~~~~s~--~~~~l~~~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iw 141 (416)
T 2pm9_A 64 LQVDSKFNDLDWSH--NNKIIAGALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIW 141 (416)
T ss_dssp CCCSSCEEEEEECS--SSSCEEEEESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBC
T ss_pred EecCCceEEEEECC--CCCeEEEEccCCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEE
Confidence 36899999999999 999999999999999999987 3355666679999999999998 8999999999999999
Q ss_pred EcCCCc------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEEECCCCceEEEE
Q psy7108 119 DVESAA------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIYSSREGILLKKF 191 (703)
Q Consensus 119 d~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lwD~~~~~~~~~~ 191 (703)
|+++++ ....+ .....|...|.+++|+|+ +..+++++.|+.|++||+++++.+..+
T Consensus 142 d~~~~~~~~~~~~~~~~-----------------~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~ 204 (416)
T 2pm9_A 142 DMNKCTESPSNYTPLTP-----------------GQSMSSVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHL 204 (416)
T ss_dssp BTTTTSSCTTTCCCBCC-----------------CCSCCSSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEE
T ss_pred ECCCCcccccccccccc-----------------ccccCCCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEE
Confidence 998875 21111 011235568999999999 789999999999999999999988887
Q ss_pred EeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCC-ccceeec-CCccceEEEEEcC-CCCEEE
Q psy7108 192 TITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKG-DMAARVL-KPEVRVFCVKFSP-TGQAWV 267 (703)
Q Consensus 192 ~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~-~~~~~~~-~h~~~V~~l~~sp-dg~~l~ 267 (703)
..+.. ..++...+.+++|+|++. .+++++.++ ....|++||++++ .....+. +|...|.+++|+| ++++|+
T Consensus 205 ~~~~~--~~~~~~~v~~~~~~~~~~~~l~~~~~d~---~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 279 (416)
T 2pm9_A 205 SYTSP--NSGIKQQLSVVEWHPKNSTRVATATGSD---NDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLL 279 (416)
T ss_dssp CCCCC--SSCCCCCEEEEEECSSCTTEEEEEECCS---SSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEE
T ss_pred ecccc--ccccCCceEEEEECCCCCCEEEEEECCC---CCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEE
Confidence 65432 123356899999999985 555555432 1127999999986 5666777 8999999999999 999999
Q ss_pred EEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 268 AATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+++.|+ |++||+.+++....+ ..+++|+|++ ..++++++.++.+++ |++...
T Consensus 280 s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~-~~~l~s~~~d~~i~i-w~~~~~ 338 (416)
T 2pm9_A 280 SSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEA-PDLFACASFDNKIEV-QTLQNL 338 (416)
T ss_dssp EEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTC-TTEEEECCSSSEEEE-EESCCC
T ss_pred EEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCC-CCEEEEEecCCcEEE-EEccCC
Confidence 999999 999999998876544 3579999987 247889999999998 998754
No 64
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=1.6e-26 Score=253.16 Aligned_cols=263 Identities=11% Similarity=0.175 Sum_probs=200.3
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-----------eeEEEecCC------------CcEEEEEEec
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-----------TQHETIQLL------------SDALCVAYKP 101 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-----------~~~~~~~~~------------~~V~~v~~sp 101 (703)
.|.+.|++++|+| ++++||+|+.||.|++||+.++. ....+..|. +.|.+++|+|
T Consensus 26 ~~~~~V~~v~~s~--~g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~ 103 (447)
T 3dw8_B 26 AEADIISTVEFNH--SGELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLP 103 (447)
T ss_dssp CGGGSEEEEEECS--SSSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECC
T ss_pred cccCcEEEEEECC--CCCEEEEEcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcC
Confidence 4689999999999 99999999999999999998775 255666787 8899999999
Q ss_pred CC--CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCC-----CCC-CCcc--------------chhhcccCCccEEEE
Q psy7108 102 DG--TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDS-----GRL-DTDL--------------VTREQSLKAKAVSTV 159 (703)
Q Consensus 102 dg--~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~-----~~~-~~~~--------------~~~~~~~~~~~V~~i 159 (703)
++ ..|++++.|+.|++||+.+++..........-.+ ... .... .......|...|.++
T Consensus 104 ~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 183 (447)
T 3dw8_B 104 QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSI 183 (447)
T ss_dssp CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEE
T ss_pred CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEE
Confidence 98 7999999999999999987554321100000000 000 0000 001124577899999
Q ss_pred EEcCCCCEEEEEecCCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCC-CEEEEEcccCCCCCeeEEECCC
Q psy7108 160 CYSADGSCILAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFG-NVSLIETRETHEGGNVVLKLPG 237 (703)
Q Consensus 160 ~~spdg~~l~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~i~iwd 237 (703)
+|+|++++|++| .|+.|++||+++ ++....+... .....+|...|.+++|+|++ +.+++++.++ .|++||
T Consensus 184 ~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~-~~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg------~i~iwd 255 (447)
T 3dw8_B 184 SINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIK-PANMEELTEVITAAEFHPNSCNTFVYSSSKG------TIRLCD 255 (447)
T ss_dssp EECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECC-CSSGGGCCCCEEEEEECSSCTTEEEEEETTS------CEEEEE
T ss_pred EEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecc-cccccccCcceEEEEECCCCCcEEEEEeCCC------eEEEEE
Confidence 999999999998 799999999994 4444444322 22456677899999999999 8888877664 899999
Q ss_pred CCCCcc----ceeecCCcc------------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCC-Cceecceee---------
Q psy7108 238 VKKGDM----AARVLKPEV------------RVFCVKFSPTGQAWVAATTEG-VHIYSLDS-GYVFDPFLL--------- 290 (703)
Q Consensus 238 ~~~~~~----~~~~~~h~~------------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~-~~~~~~~~~--------- 290 (703)
+++++. ...+..|.. .|.+++|+|+|++|++++. + |++||+.+ ++....+..
T Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~l~ 334 (447)
T 3dw8_B 256 MRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQVHEYLRSKLC 334 (447)
T ss_dssp TTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEESCGGGTTTHH
T ss_pred CcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceeecccccccccc
Confidence 999886 677777776 8999999999999999999 8 99999987 665544431
Q ss_pred ------------eEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 291 ------------DISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 291 ------------~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
.++|+|++ .++++++.++.+.+ |++...
T Consensus 335 ~~~~~~~i~~~~~~~~s~~~--~~l~s~s~dg~v~i-wd~~~~ 374 (447)
T 3dw8_B 335 SLYENDCIFDKFECCWNGSD--SVVMTGSYNNFFRM-FDRNTK 374 (447)
T ss_dssp HHHHTSGGGCCCCEEECTTS--SEEEEECSTTEEEE-EETTTC
T ss_pred ccccccccccceEEEECCCC--CEEEEeccCCEEEE-EEcCCC
Confidence 28999999 78899999999999 998764
No 65
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.95 E-value=3.6e-26 Score=242.56 Aligned_cols=244 Identities=14% Similarity=0.230 Sum_probs=193.4
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCC---CCEEEEEeCCCcEEEEEcCC-Ccee-EEEecCCCcEEEEEEecCCCEEEE
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLS---STGMVSASWDKTVKLWNAVE-TDTQ-HETIQLLSDALCVAYKPDGTEIVV 108 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~d---g~~L~sgs~Dg~V~iWd~~~-~~~~-~~~~~~~~~V~~v~~spdg~~las 108 (703)
..+.+ ..+.+|.+.|++++|+| + |++|++|+.||.|++||+.+ +... .....|...|.+++|+|++++|++
T Consensus 28 ~~~~~--~~~~~h~~~v~~~~~~~--~~~~g~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s 103 (368)
T 3mmy_A 28 PMKDI--EVTSSPDDSIGCLSFSP--PTLPGNFLIAGSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFT 103 (368)
T ss_dssp TTCCE--ECSSCCSSCEEEEEECC--TTSSSEEEEEEETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEE
T ss_pred Cccee--EeccCCCCceEEEEEcC--CCCCceEEEEECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEE
Confidence 34555 78899999999999999 7 69999999999999999987 4444 556679999999999999999999
Q ss_pred EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE--cCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++.||.|++||+++++.... ..|. ..|.+++| +|++++|++++.|+.|++||+++++
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~-~~~~--------------------~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~ 162 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQI-AQHD--------------------APVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSN 162 (368)
T ss_dssp EETTSEEEEEETTTTEEEEE-EECS--------------------SCEEEEEEEECSSCEEEEEEETTSEEEEECSSCSS
T ss_pred EcCCCcEEEEEcCCCCceee-cccc--------------------CceEEEEEEeCCCCCEEEEccCCCcEEEEECCCCc
Confidence 99999999999999887653 3343 38999999 9999999999999999999999988
Q ss_pred eEEEEEeccCC---------------------------------ccccccccceeeeeccCCCE----EEEEcccCCCCC
Q psy7108 187 LLKKFTITQNK---------------------------------SLDGINDFINRRKMTEFGNV----SLIETRETHEGG 229 (703)
Q Consensus 187 ~~~~~~~~~~~---------------------------------~~~~~~~~v~~~~~spdg~~----l~~~~~~~~~~~ 229 (703)
++..+..+... ..........++++.+++.. +++++.++
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg---- 238 (368)
T 3mmy_A 163 PMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEG---- 238 (368)
T ss_dssp CSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTS----
T ss_pred EEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCC----
Confidence 77776643310 00011123344555544443 66666553
Q ss_pred eeEEECCCCCCC---ccceeecCCcc------------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----
Q psy7108 230 NVVLKLPGVKKG---DMAARVLKPEV------------RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF----- 288 (703)
Q Consensus 230 ~~~i~iwd~~~~---~~~~~~~~h~~------------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~----- 288 (703)
.+++||++.. .....+..|.. .|.+++|+|++++|++++.|| |++||+.+++....+
T Consensus 239 --~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~ 316 (368)
T 3mmy_A 239 --RVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQ 316 (368)
T ss_dssp --EEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSS
T ss_pred --cEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCC
Confidence 8999999887 45666677766 699999999999999999999 999999998775443
Q ss_pred -eeeEEEccchhhhHhhcCCcce
Q psy7108 289 -LLDISITPQSVKEALADKDYAK 310 (703)
Q Consensus 289 -~~~~~~spd~~~~~l~sg~~~~ 310 (703)
..+++|+|++ .++++++.++
T Consensus 317 ~v~~~~~s~~g--~~l~~~s~d~ 337 (368)
T 3mmy_A 317 PISACCFNHNG--NIFAYASSYD 337 (368)
T ss_dssp CEEEEEECTTS--SCEEEEECCC
T ss_pred CceEEEECCCC--CeEEEEeccc
Confidence 4679999999 7777766544
No 66
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.95 E-value=3.1e-26 Score=252.68 Aligned_cols=270 Identities=16% Similarity=0.191 Sum_probs=214.5
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEe--cCCC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYK--PDGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~s--pdg~ 104 (703)
+++|| .+++++ ..+.+|.+.|++++|+| ++ .|++|+.||+|++||+.+++.......|.+.|.+++|+ ++++
T Consensus 144 i~vwd~~~~~~~--~~~~~h~~~V~~l~~~~--~~-~l~s~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~ 218 (464)
T 3v7d_B 144 IRVYDSINKKFL--LQLSGHDGGVWALKYAH--GG-ILVSGSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIK 218 (464)
T ss_dssp EEEEETTTTEEE--EEECCCSSCEEEEEECS--TT-EEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCE
T ss_pred EEEEECCCCcEE--EEEeCCCcCEEEEEEcC--CC-EEEEEeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCC
Confidence 66777 578888 89999999999999999 66 99999999999999999987777777899999999998 5778
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEeccccCCC---CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEE
Q psy7108 105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDS---GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYS 181 (703)
Q Consensus 105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD 181 (703)
.+++++.|+.|++||+++++............. ..............|...+.++ +++++++++++.|+.|++||
T Consensus 219 ~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~~~~~l~~~~~d~~i~vwd 296 (464)
T 3v7d_B 219 YIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGHMASVRTV--SGHGNIVVSGSYDNTLIVWD 296 (464)
T ss_dssp EEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCCSSCEEEE--EEETTEEEEEETTSCEEEEE
T ss_pred EEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCccceEEEE--cCCCCEEEEEeCCCeEEEEE
Confidence 999999999999999988764432221111000 0000001112233456677776 67899999999999999999
Q ss_pred CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108 182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP 261 (703)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp 261 (703)
+++++++..+..+. ..+.+++|+|+++.+++++.++ .|++||+++++++..+.+|...|.+++|+
T Consensus 297 ~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~h~~~v~~~~~~- 361 (464)
T 3v7d_B 297 VAQMKCLYILSGHT--------DRIYSTIYDHERKRCISASMDT------TIRIWDLENGELMYTLQGHTALVGLLRLS- 361 (464)
T ss_dssp TTTTEEEEEECCCS--------SCEEEEEEETTTTEEEEEETTS------CEEEEETTTTEEEEEECCCSSCEEEEEEC-
T ss_pred CCCCcEEEEecCCC--------CCEEEEEEcCCCCEEEEEeCCC------cEEEEECCCCcEEEEEeCCCCcEEEEEEc-
Confidence 99999988876544 4899999999999999888764 89999999999999999999999999997
Q ss_pred CCCEEEEEeCCC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108 262 TGQAWVAATTEG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI 324 (703)
Q Consensus 262 dg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~ 324 (703)
++++++++.|| |++||+.++...... ...++++|++ .++++++ ++.+.+ |++.....+
T Consensus 362 -~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~-dg~i~i-wd~~~g~~~ 425 (464)
T 3v7d_B 362 -DKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSD--NILVSGS-ENQFNI-YNLRSGKLV 425 (464)
T ss_dssp -SSEEEEEETTSEEEEEETTTCCEEEEEECTTCCCEEEEEECS--SEEEEEE-TTEEEE-EETTTCCEE
T ss_pred -CCEEEEEeCCCcEEEEECCCCceeeeecCCCCccEEEEEeCC--CEEEEec-CCeEEE-EECCCCcEE
Confidence 57999999999 999999987654333 2457889998 7788877 788888 998765443
No 67
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=3e-26 Score=270.91 Aligned_cols=242 Identities=12% Similarity=0.157 Sum_probs=214.6
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+++.+|.+.|++++|+| ++++|++|+.||.|++||+.++.....+..|.+.|.+++|+|++++|++++.||.|++||+
T Consensus 7 ~~~~~h~~~v~~i~~sp--~~~~la~~~~~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~ 84 (814)
T 3mkq_A 7 KTFSNRSDRVKGIDFHP--TEPWVLTTLYSGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDFRIRVFNY 84 (814)
T ss_dssp EEEEEECSCEEEEEECS--SSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTSEEEEEET
T ss_pred eeeecCCCceEEEEECC--CCCEEEEEeCCCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCCeEEEEEC
Confidence 78899999999999999 9999999999999999999998877888889999999999999999999999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC-ceEEEEEeccCCcc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG-ILLKKFTITQNKSL 199 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~-~~~~~~~~~~~~~~ 199 (703)
.+++.+..+.+|.. .|++++|+|++++|++++.|+.|++||++++ .....+..+.
T Consensus 85 ~~~~~~~~~~~~~~--------------------~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~---- 140 (814)
T 3mkq_A 85 NTGEKVVDFEAHPD--------------------YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHE---- 140 (814)
T ss_dssp TTCCEEEEEECCSS--------------------CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCS----
T ss_pred CCCcEEEEEecCCC--------------------CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCC----
Confidence 99999999888765 8999999999999999999999999999987 5555555443
Q ss_pred ccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcC--CCCEEEEEeCCC-E
Q psy7108 200 DGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSP--TGQAWVAATTEG-V 274 (703)
Q Consensus 200 ~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~sp--dg~~l~s~s~Dg-v 274 (703)
..+.+++|+| ++..+++++.++ .|++||+.+++.......+. ..+.+++|+| +++++++++.|| |
T Consensus 141 ----~~v~~~~~~p~~~~~l~~~~~dg------~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i 210 (814)
T 3mkq_A 141 ----HFVMCVAFNPKDPSTFASGCLDR------TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTI 210 (814)
T ss_dssp ----SCEEEEEEETTEEEEEEEEETTS------EEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEE
T ss_pred ----CcEEEEEEEcCCCCEEEEEeCCC------eEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEE
Confidence 4899999999 788888877664 89999999888777776654 8899999999 999999999999 9
Q ss_pred EEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 275 HIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 275 ~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
++||+.+++....+ ...++|+|++ ..+++++.++.+.+ |++...
T Consensus 211 ~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~--~~l~~~~~dg~v~v-wd~~~~ 260 (814)
T 3mkq_A 211 KIWDYQTKSCVATLEGHMSNVSFAVFHPTL--PIIISGSEDGTLKI-WNSSTY 260 (814)
T ss_dssp EEEETTTTEEEEEEECCSSCEEEEEECSSS--SEEEEEETTSCEEE-EETTTC
T ss_pred EEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEeCCCeEEE-EECCCC
Confidence 99999988765444 3578999999 78999999999998 887653
No 68
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.95 E-value=1.8e-25 Score=231.85 Aligned_cols=247 Identities=14% Similarity=0.212 Sum_probs=206.5
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC---ceeEEEecCCCcEEEEEEecCC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET---DTQHETIQLLSDALCVAYKPDG 103 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~---~~~~~~~~~~~~V~~v~~spdg 103 (703)
+++|| .+++.. ..+.+|.+.|.+++|+| ++++|++|+.||.+++|++... ........|...|.+++| ++
T Consensus 41 v~vw~~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~l~~~~~dg~i~~~~~~~~~~~~~~~~~~~~~~~i~~~~~--~~ 114 (313)
T 3odt_A 41 VRLWSKDDQWLG--TVVYTGQGFLNSVCYDS--EKELLLFGGKDTMINGVPLFATSGEDPLYTLIGHQGNVCSLSF--QD 114 (313)
T ss_dssp EEEEEESSSEEE--EEEEECSSCEEEEEEET--TTTEEEEEETTSCEEEEETTCCTTSCC-CEECCCSSCEEEEEE--ET
T ss_pred EEEEECCCCEEE--EEeecCCccEEEEEECC--CCCEEEEecCCCeEEEEEeeecCCCCcccchhhcccCEEEEEe--cC
Confidence 56666 355666 78889999999999999 9999999999999999998754 345566679999999999 57
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEEC
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSS 182 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~ 182 (703)
+.+++++.|+.|++|| .++....+..|.. .+.+++|+| +++.+++++.|+.|++||
T Consensus 115 ~~l~~~~~d~~i~~~d--~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~l~~~~~d~~i~i~d- 171 (313)
T 3odt_A 115 GVVISGSWDKTAKVWK--EGSLVYNLQAHNA--------------------SVWDAKVVSFSENKFLTASADKTIKLWQ- 171 (313)
T ss_dssp TEEEEEETTSEEEEEE--TTEEEEEEECCSS--------------------CEEEEEEEETTTTEEEEEETTSCEEEEE-
T ss_pred CEEEEEeCCCCEEEEc--CCcEEEecccCCC--------------------ceeEEEEccCCCCEEEEEECCCCEEEEe-
Confidence 8999999999999999 6777777777654 899999988 999999999999999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd 262 (703)
..+....+... +...+.+++|+|++. +++++.++ .|++||+++++.+..+..|...|.+++|+|+
T Consensus 172 -~~~~~~~~~~~-------~~~~i~~~~~~~~~~-~~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~ 236 (313)
T 3odt_A 172 -NDKVIKTFSGI-------HNDVVRHLAVVDDGH-FISCSNDG------LIKLVDMHTGDVLRTYEGHESFVYCIKLLPN 236 (313)
T ss_dssp -TTEEEEEECSS-------CSSCEEEEEEEETTE-EEEEETTS------EEEEEETTTCCEEEEEECCSSCEEEEEECTT
T ss_pred -cCceEEEEecc-------CcccEEEEEEcCCCe-EEEccCCC------eEEEEECCchhhhhhhhcCCceEEEEEEecC
Confidence 44555555431 335899999999999 66666553 8999999999999999999999999999999
Q ss_pred CCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhH
Q psy7108 263 GQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGL 323 (703)
Q Consensus 263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~ 323 (703)
+ .+++++.|+ |++||+.+++....+ ...++|+|++ . +.+++.++.+.+ |+++....
T Consensus 237 ~-~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~--~-~~~~~~dg~i~i-w~~~~~~~ 299 (313)
T 3odt_A 237 G-DIVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNG--D-IIVGSSDNLVRI-FSQEKSRW 299 (313)
T ss_dssp S-CEEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTS--C-EEEEETTSCEEE-EESCGGGC
T ss_pred C-CEEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCC--C-EEEEeCCCcEEE-EeCCCCce
Confidence 9 589999999 999999998875544 3578999999 4 456888999998 99887643
No 69
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.95 E-value=6.7e-26 Score=267.94 Aligned_cols=248 Identities=14% Similarity=0.101 Sum_probs=214.8
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+.+|| .+++.+ ..+.+|.++|++++|+| ++++|++|+.||.|++||+.+++.......|.+.|.+++|+|+++.|
T Consensus 37 v~iwd~~~~~~~--~~~~~~~~~v~~~~~s~--~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l 112 (814)
T 3mkq_A 37 VEIWNYETQVEV--RSIQVTETPVRAGKFIA--RKNWIIVGSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYV 112 (814)
T ss_dssp EEEEETTTTEEE--EEEECCSSCEEEEEEEG--GGTEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEE
T ss_pred EEEEECCCCceE--EEEecCCCcEEEEEEeC--CCCEEEEEeCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEE
Confidence 66777 578888 89999999999999999 99999999999999999999998888888899999999999999999
Q ss_pred EEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCC
Q psy7108 107 VVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSRE 184 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~ 184 (703)
++++.||.|++||++++ .....+.+|.. .|.+++|+| +++.+++++.|+.|++||+++
T Consensus 113 ~~~~~dg~i~vw~~~~~~~~~~~~~~~~~--------------------~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~ 172 (814)
T 3mkq_A 113 LSGSDDLTVKLWNWENNWALEQTFEGHEH--------------------FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQ 172 (814)
T ss_dssp EEEETTSEEEEEEGGGTSEEEEEEECCSS--------------------CEEEEEEETTEEEEEEEEETTSEEEEEETTC
T ss_pred EEEcCCCEEEEEECCCCceEEEEEcCCCC--------------------cEEEEEEEcCCCCEEEEEeCCCeEEEEECCC
Confidence 99999999999999987 66667776654 899999999 889999999999999999998
Q ss_pred CceEEEEEeccCCccccccccceeeeecc--CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTE--FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd 262 (703)
+.....+..+. ...+..++|+| ++..+++++.++ .|++||..+++....+.+|...|.+++|+|+
T Consensus 173 ~~~~~~~~~~~-------~~~v~~~~~~~~~~~~~l~~~~~dg------~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~ 239 (814)
T 3mkq_A 173 STPNFTLTTGQ-------ERGVNYVDYYPLPDKPYMITASDDL------TIKIWDYQTKSCVATLEGHMSNVSFAVFHPT 239 (814)
T ss_dssp SSCSEEEECCC-------TTCCCEEEECCSTTCCEEEEECTTS------EEEEEETTTTEEEEEEECCSSCEEEEEECSS
T ss_pred CcceeEEecCC-------CCCEEEEEEEECCCCCEEEEEeCCC------EEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 87777665433 24788999999 899998888764 8999999999999889999999999999999
Q ss_pred CCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEE
Q psy7108 263 GQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKAL 312 (703)
Q Consensus 263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l 312 (703)
++++++++.|| |++|++.+++....+ ...++|+|++...+++.+..++..
T Consensus 240 ~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~ 296 (814)
T 3mkq_A 240 LPIIISGSEDGTLKIWNSSTYKVEKTLNVGLERSWCIATHPTGRKNYIASGFDNGFT 296 (814)
T ss_dssp SSEEEEEETTSCEEEEETTTCSEEEEECCSSSSEEEEEECTTCGGGEEEEEETTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEEEEeecCCCcEEEEEEccCCCceEEEEEeCCCEE
Confidence 99999999999 999999988765443 367899999844346665544433
No 70
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.95 E-value=5.9e-26 Score=244.72 Aligned_cols=252 Identities=12% Similarity=0.090 Sum_probs=204.0
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-------------cCCCcEEEEEEe
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-------------QLLSDALCVAYK 100 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-------------~~~~~V~~v~~s 100 (703)
.++.. ..+.+|.++|++++|+|. ++++|++|+.||.|++||+.++....... .|...|.+++|+
T Consensus 32 ~~~~~--~~~~~h~~~v~~~~~s~~-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~ 108 (408)
T 4a11_B 32 LNKDR--DVERIHGGGINTLDIEPV-EGRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWY 108 (408)
T ss_dssp ECTTE--EECCCCSSCEEEEEECTT-TCCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEEC
T ss_pred cCcce--eeeeccCCcEEEEEEecC-CCCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEc
Confidence 45666 788999999999999995 68999999999999999998775433322 388999999999
Q ss_pred c-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCc
Q psy7108 101 P-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKY 176 (703)
Q Consensus 101 p-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~ 176 (703)
| ++..|++++.|+.|++||+++++....+.... .+.+++|+|. +.++++++.|+.
T Consensus 109 ~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~~~~~~~~~~ 167 (408)
T 4a11_B 109 PHDTGMFTSSSFDKTLKVWDTNTLQTADVFNFEE---------------------TVYSHHMSPVSTKHCLVAVGTRGPK 167 (408)
T ss_dssp TTCTTCEEEEETTSEEEEEETTTTEEEEEEECSS---------------------CEEEEEECSSCSSCCEEEEEESSSS
T ss_pred cCCCcEEEEEeCCCeEEEeeCCCCccceeccCCC---------------------ceeeeEeecCCCCCcEEEEEcCCCe
Confidence 9 77899999999999999999999888776432 6899999884 459999999999
Q ss_pred EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCCCc-cceee-------
Q psy7108 177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKKGD-MAARV------- 247 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~~~-~~~~~------- 247 (703)
|++||+++++.+..+..+. ..|.+++|+|+++. +++++.++ .|++||++++. ....+
T Consensus 168 v~~~d~~~~~~~~~~~~~~--------~~v~~~~~~~~~~~ll~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~ 233 (408)
T 4a11_B 168 VQLCDLKSGSCSHILQGHR--------QEILAVSWSPRYDYILATASADS------RVKLWDVRRASGCLITLDQHNGKK 233 (408)
T ss_dssp EEEEESSSSCCCEEECCCC--------SCEEEEEECSSCTTEEEEEETTS------CEEEEETTCSSCCSEECCTTTTCS
T ss_pred EEEEeCCCcceeeeecCCC--------CcEEEEEECCCCCcEEEEEcCCC------cEEEEECCCCCccccccccccccc
Confidence 9999999998887776443 48999999999995 55655543 79999998765 22222
Q ss_pred --------cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee---------------------------------
Q psy7108 248 --------LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF--------------------------------- 285 (703)
Q Consensus 248 --------~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~--------------------------------- 285 (703)
..|...|.+++|+|++++|++++.|+ +++||+.+++..
T Consensus 234 ~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 313 (408)
T 4a11_B 234 SQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFVFVPYG 313 (408)
T ss_dssp CCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEEEEEET
T ss_pred ceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeEEecCCCceEEEEecC
Confidence 46888999999999999999999999 999998875431
Q ss_pred --------------------cceeeeEEEccchhhhHhhcCCcceEEEEEEecCchhHHHH
Q psy7108 286 --------------------DPFLLDISITPQSVKEALADKDYAKALMMSLKLNEQGLIIH 326 (703)
Q Consensus 286 --------------------~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~~~ 326 (703)
.....+++|+|++ .++++++.++.+.+ |++...+.+..
T Consensus 314 ~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~s~~~dg~i~i-w~~~~~~~~~~ 371 (408)
T 4a11_B 314 STIAVYTVYSGEQITMLKGHYKTVDCCVFQSNF--QELYSGSRDCNILA-WVPSLYEPVPD 371 (408)
T ss_dssp TEEEEEETTTCCEEEEECCCSSCEEEEEEETTT--TEEEEEETTSCEEE-EEECC------
T ss_pred CEEEEEECcCCcceeeeccCCCeEEEEEEcCCC--CEEEEECCCCeEEE-EeCCCCCccCC
Confidence 1112568999999 88999999999999 99987755443
No 71
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.95 E-value=2e-26 Score=248.13 Aligned_cols=251 Identities=14% Similarity=0.193 Sum_probs=206.8
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc------eeEEEecCCCcEEEEEEecC----C---CEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD------TQHETIQLLSDALCVAYKPD----G---TEIV 107 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~------~~~~~~~~~~~V~~v~~spd----g---~~la 107 (703)
.++.+|.++|++++|+| ++|++|+.||+|++|++.+++ ....+..|...|.+++|+|+ + ++|+
T Consensus 10 ~~~~~h~~~i~~~~~~~----~~l~s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~g~~~~~l~ 85 (397)
T 1sq9_A 10 NAGKAHDADIFSVSACN----SFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQAIERDAFELCLVA 85 (397)
T ss_dssp EESSCSSSCEEEEEECS----SEEEEEETTSEEEEEESBCCTTCCGGGGEEEEECCTTCEEEEEEEEEEETTTEEEEEEE
T ss_pred hhhhhhhcCeEEEEecC----CeEEEEcCCCEEEEEECCCcccccCCCcceEEecCCCcEEEEEEecccccCCccccEEE
Confidence 67889999999999987 799999999999999998886 57777789999999999999 9 9999
Q ss_pred EEECCCeEEEEEcCCCcE-----EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc----CCCCE-EEEEecCCcE
Q psy7108 108 VATLDGQLIMFDVESAAQ-----VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS----ADGSC-ILAAGQSKYI 177 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s----pdg~~-l~s~s~dg~I 177 (703)
+++.|+.|++||+.+++. ...+..+... .....|.+++|+ |+++. |++++.|+.|
T Consensus 86 s~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~v~~~~~~~~~~~~~~~~l~~~~~dg~i 150 (397)
T 1sq9_A 86 TTSFSGDLLFYRITREDETKKVIFEKLDLLDSD---------------MKKHSFWALKWGASNDRLLSHRLVATDVKGTT 150 (397)
T ss_dssp EEETTSCEEEEEEEECTTTCCEEEEEECCSCTT---------------GGGSCEEEEEEECCC----CEEEEEEETTSCE
T ss_pred EEcCCCCEEEEEccCCcccccccceeecccccc---------------cCCCcEEEEEEeeccCCCCceEEEEEeCCCcE
Confidence 999999999999998876 7777666310 002389999999 99999 9999999999
Q ss_pred EEEECCC------CceEE-----EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee
Q psy7108 178 CIYSSRE------GILLK-----KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR 246 (703)
Q Consensus 178 ~lwD~~~------~~~~~-----~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~ 246 (703)
++||+++ ++.+. .+.... .....+...+.+++|+|++ .+++++.++ .|++||+++++.+..
T Consensus 151 ~iwd~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~i~~~~~~~~~-~l~~~~~dg------~i~i~d~~~~~~~~~ 222 (397)
T 1sq9_A 151 YIWKFHPFADESNSLTLNWSPTLELQGTV-ESPMTPSQFATSVDISERG-LIATGFNNG------TVQISELSTLRPLYN 222 (397)
T ss_dssp EEEEEESSSSHHHHTTTCCCCEEEEEEEE-CCSSSSCCCCCEEEECTTS-EEEEECTTS------EEEEEETTTTEEEEE
T ss_pred EEEeCCccccccccceeeccCcceeeeee-ccccCCCCCceEEEECCCc-eEEEEeCCC------cEEEEECCCCceeEE
Confidence 9999998 65554 543210 0012245589999999999 777777653 899999999998888
Q ss_pred ecC---C---ccceEEEEEcCCCCEEEEEeCC---C-EEEEEcCCCceecce-------------------eeeEEEccc
Q psy7108 247 VLK---P---EVRVFCVKFSPTGQAWVAATTE---G-VHIYSLDSGYVFDPF-------------------LLDISITPQ 297 (703)
Q Consensus 247 ~~~---h---~~~V~~l~~spdg~~l~s~s~D---g-v~iwd~~~~~~~~~~-------------------~~~~~~spd 297 (703)
+.. | ...|.+++|+|++++|++++.| + |++||+.+++....+ ..+++|+|+
T Consensus 223 ~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 302 (397)
T 1sq9_A 223 FESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDS 302 (397)
T ss_dssp EECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSCEEEEEECSS
T ss_pred EeccccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceeccCcccccccccccccCCcEEEEEECCC
Confidence 888 8 9999999999999999999999 8 999999988764333 356899999
Q ss_pred hhhhHhhcCCcceEEEEEEecCch
Q psy7108 298 SVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 298 ~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+ .++++++.++.+.+ |++...
T Consensus 303 ~--~~l~~~~~dg~i~i-wd~~~~ 323 (397)
T 1sq9_A 303 G--ETLCSAGWDGKLRF-WDVKTK 323 (397)
T ss_dssp S--SEEEEEETTSEEEE-EETTTT
T ss_pred C--CEEEEEeCCCeEEE-EEcCCC
Confidence 9 78999999999998 998754
No 72
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.95 E-value=3.2e-26 Score=250.75 Aligned_cols=248 Identities=13% Similarity=0.175 Sum_probs=192.0
Q ss_pred ccccCCC------------cCeEEEEEcCCCCC--CEEEEEeCCCcEEEEEcCCCcee----------------------
Q psy7108 41 EVLSGHE------------GPVSCIEFSPVLSS--TGMVSASWDKTVKLWNAVETDTQ---------------------- 84 (703)
Q Consensus 41 ~~l~gH~------------~~V~~l~~sp~~dg--~~L~sgs~Dg~V~iWd~~~~~~~---------------------- 84 (703)
..+.+|. +.|++++|+| ++ ..|++++.|++|++||+.++...
T Consensus 75 ~~~~~h~~~~~~~~~~~~~~~V~~l~~~~--~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 152 (447)
T 3dw8_B 75 STFQSHEPEFDYLKSLEIEEKINKIRWLP--QKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTL 152 (447)
T ss_dssp EEEECCCCEEEGGGTEEECCCCCEEEECC--CCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSC
T ss_pred cccccccccccccccccccCceEEEEEcC--CCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccce
Confidence 7889998 8999999999 87 79999999999999998764321
Q ss_pred -----------------EE-EecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEeccccCCCCCCCCccc
Q psy7108 85 -----------------HE-TIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEARRDLDSGRLDTDLV 145 (703)
Q Consensus 85 -----------------~~-~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~ 145 (703)
.. ...|...|.+++|+|++++|++| .|+.|++||+++ ++....+....
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~------------ 219 (447)
T 3dw8_B 153 RVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKP------------ 219 (447)
T ss_dssp CCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCC------------
T ss_pred EeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeeccc------------
Confidence 11 23588999999999999999998 799999999984 44444332111
Q ss_pred hhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCce----EEEEEeccCC----ccccccccceeeeeccCCC
Q psy7108 146 TREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGIL----LKKFTITQNK----SLDGINDFINRRKMTEFGN 216 (703)
Q Consensus 146 ~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~----~~~~~~~~~~----~~~~~~~~v~~~~~spdg~ 216 (703)
.....|...|.+++|+|++ +.|++|+.|+.|++||+++++. ...+..+... ...++...|.+++|+|+|+
T Consensus 220 -~~~~~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~ 298 (447)
T 3dw8_B 220 -ANMEELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGR 298 (447)
T ss_dssp -SSGGGCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSS
T ss_pred -ccccccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCC
Confidence 0123456689999999998 9999999999999999999876 5666544321 1122334899999999999
Q ss_pred EEEEEcccCCCCCeeEEECCCCCC-CccceeecCCccc---------------eEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108 217 VSLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVR---------------VFCVKFSPTGQAWVAATTEG-VHIYSL 279 (703)
Q Consensus 217 ~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~---------------V~~l~~spdg~~l~s~s~Dg-v~iwd~ 279 (703)
++++++. + .|++||+++ ++++..+..|... +..++|+|++++|++++.|| |++||+
T Consensus 299 ~l~~~~~-~------~v~iwd~~~~~~~~~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~ 371 (447)
T 3dw8_B 299 YMMTRDY-L------SVKVWDLNMENRPVETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDR 371 (447)
T ss_dssp EEEEEES-S------EEEEEETTCCSSCSCCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEET
T ss_pred EEEEeeC-C------eEEEEeCCCCccccceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEc
Confidence 9988765 4 899999997 8888888887642 23499999999999999999 999999
Q ss_pred CCCceec--------------------------------------ceeeeEEEccchhhhHhhcCCcceEEE
Q psy7108 280 DSGYVFD--------------------------------------PFLLDISITPQSVKEALADKDYAKALM 313 (703)
Q Consensus 280 ~~~~~~~--------------------------------------~~~~~~~~spd~~~~~l~sg~~~~~l~ 313 (703)
.+++... .....++|+|++ ..++.+..+....
T Consensus 372 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~--~~la~~~~~~~~~ 441 (447)
T 3dw8_B 372 NTKRDITLEASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKE--NIIAVATTNNLYI 441 (447)
T ss_dssp TTCCEEEEECCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSS--SEEEEECSSCEEE
T ss_pred CCCcceeeeecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCC--CEEEEEecceeee
Confidence 9886532 012458999999 7777777665443
No 73
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.94 E-value=1.7e-25 Score=243.97 Aligned_cols=253 Identities=14% Similarity=0.228 Sum_probs=208.6
Q ss_pred ceeec-cCCCccccccc--cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108 28 VKKGD-MAARVLKPEVL--SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l--~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~ 104 (703)
|++|| .+|+++ +.+ .+|...|++++|+| +|++|++|+.||+|++||+.+++.+.....|...+.+++++ +.
T Consensus 127 V~lWd~~tg~~~--~~~~~~~~~~~V~sv~fsp--dg~~lasgs~Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~--~~ 200 (420)
T 4gga_A 127 VYLWSASSGDIL--QLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWN--SY 200 (420)
T ss_dssp EEEEETTTCCEE--EEEECCSTTCCEEEEEECT--TSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TT
T ss_pred EEEEECCCCCEE--EEEEecCCCCcEEEEEECC--CCCEEEEEECCCeEEEEEcCCCcEEEEEeCCCCceEEEeeC--CC
Confidence 66676 478877 544 57888999999999 99999999999999999999998888888899999988775 67
Q ss_pred EEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108 105 EIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 105 ~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~ 183 (703)
.+++|+.|+.+++||.... ..+..+.+|.. .+..+.|+|+++++++++.|+.+++||..
T Consensus 201 ~l~sgs~d~~i~~~d~~~~~~~~~~~~~h~~--------------------~~~~~~~~~~g~~l~s~~~D~~v~i~~~~ 260 (420)
T 4gga_A 201 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------------------EVCGLRWAPDGRHLASGGNDNLVNVWPSA 260 (420)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEEEeCCCceeEeeecccceeeEEeccccc--------------------ceeeeeecCCCCeeeeeeccccceEEeec
Confidence 9999999999999999864 45566777655 89999999999999999999999999998
Q ss_pred CCce----EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEE
Q psy7108 184 EGIL----LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKF 259 (703)
Q Consensus 184 ~~~~----~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~ 259 (703)
+++. +.... .+...|.+++|+|++..+++.+... .++.|++||+.++++...+..+ ..+.++.|
T Consensus 261 ~~~~~~~~~~~~~--------~~~~~V~~~~~~p~~~~~la~~~gs---~D~~I~iwd~~t~~~~~~~~~~-~~v~~~~~ 328 (420)
T 4gga_A 261 PGEGGWVPLQTFT--------QHQGAVKAVAWCPWQSNVLATGGGT---SDRHIRIWNVCSGACLSAVDAH-SQVCSILW 328 (420)
T ss_dssp CCSSCSCCSEEEC--------CCSSCEEEEEECTTCTTEEEEEECT---TTCEEEEEETTTTEEEEEEECS-SCEEEEEE
T ss_pred cccccceeeeeec--------ccCCceeeeeeCCCcccEEEEEeec---CCCEEEEEeCCccccceeeccc-cceeeeee
Confidence 7653 22222 3445899999999887665543221 1248999999999887776654 56889999
Q ss_pred cCCCCEEEEEe--CCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 260 SPTGQAWVAAT--TEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 260 spdg~~l~s~s--~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+|+++.+++++ .|+ |+|||+.+++.+..+ +.+++|+|++ ..|++++.|+++++ |++.+.
T Consensus 329 ~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg--~~l~S~s~D~tvri-Wdv~~~ 396 (420)
T 4gga_A 329 SPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG--ATVASAAADETLRL-WRCFEL 396 (420)
T ss_dssp ETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SCEEEEETTTEEEE-ECCSCS
T ss_pred cCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEecCCeEEE-EECCCC
Confidence 99999998765 678 999999998876554 4679999999 88999999999999 998653
No 74
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.94 E-value=2e-25 Score=234.70 Aligned_cols=225 Identities=20% Similarity=0.259 Sum_probs=174.8
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+.+.+|...|++++|+| ++++|++|+.|+.|++|+............+...+....++++++.|++++.|+.+++||+
T Consensus 80 ~~l~~h~~~V~~~~~s~--dg~~l~s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~ 157 (340)
T 4aow_A 80 RALRGHSHFVSDVVISS--DGQFALSGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNT 157 (340)
T ss_dssp EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECT
T ss_pred EEEeCCCCCEEEEEECC--CCCEEEEEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEe
Confidence 67899999999999999 9999999999999999999888766666777788888888888888888888999999988
Q ss_pred CCCcEEEE-EeccccCC------CCC------------------CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC
Q psy7108 121 ESAAQVGS-VEARRDLD------SGR------------------LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK 175 (703)
Q Consensus 121 ~~~~~~~~-~~~~~~~~------~~~------------------~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg 175 (703)
........ ..+|.... ... ............|.+.|++++|+|++++|++|+.|+
T Consensus 158 ~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg 237 (340)
T 4aow_A 158 LGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDG 237 (340)
T ss_dssp TSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTC
T ss_pred CCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCC
Confidence 65543221 11111100 000 000111122345778999999999999999999999
Q ss_pred cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee--------
Q psy7108 176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-------- 247 (703)
Q Consensus 176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-------- 247 (703)
.|++||+++.+++..+..+ ..+.+++|+|++..++.+. + ..|++||++++.....+
T Consensus 238 ~i~iwd~~~~~~~~~~~~~---------~~v~~~~~~~~~~~~~~~~-d------~~i~iwd~~~~~~~~~~~~~~~~~~ 301 (340)
T 4aow_A 238 QAMLWDLNEGKHLYTLDGG---------DIINALCFSPNRYWLCAAT-G------PSIKIWDLEGKIIVDELKQEVISTS 301 (340)
T ss_dssp EEEEEETTTTEEEEEEECS---------SCEEEEEECSSSSEEEEEE-T------TEEEEEETTTTEEEEEECCC-----
T ss_pred eEEEEEeccCceeeeecCC---------ceEEeeecCCCCceeeccC-C------CEEEEEECCCCeEEEeccccceeee
Confidence 9999999999988877632 3688999999987665543 3 27999999887654443
Q ss_pred -cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108 248 -LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY 283 (703)
Q Consensus 248 -~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~ 283 (703)
..|...|++++|+|||++|++|+.|| |+||++.+|.
T Consensus 302 ~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 302 SKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp --CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 35788999999999999999999999 9999999885
No 75
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.94 E-value=6.6e-25 Score=232.86 Aligned_cols=243 Identities=15% Similarity=0.220 Sum_probs=186.3
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|| .+++.+ ..+.+|.+.|++++|+| ++++|++++.||.|++||+.+++...... +...|.+++|+|+++.+
T Consensus 56 i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-~~~~v~~~~~~~~~~~l 130 (369)
T 3zwl_B 56 ASVWYSLNGERL--GTLDGHTGTIWSIDVDC--FTKYCVTGSADYSIKLWDVSNGQCVATWK-SPVPVKRVEFSPCGNYF 130 (369)
T ss_dssp EEEEETTTCCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEE-CSSCEEEEEECTTSSEE
T ss_pred EEEEeCCCchhh--hhhhhcCCcEEEEEEcC--CCCEEEEEeCCCeEEEEECCCCcEEEEee-cCCCeEEEEEccCCCEE
Confidence 77787 578888 89999999999999999 99999999999999999998886554443 77778888888877777
Q ss_pred EEEECC-----CeEEEEEcCCCc-----------------------EEEEEecccc---CCCCC---------CCC-ccc
Q psy7108 107 VVATLD-----GQLIMFDVESAA-----------------------QVGSVEARRD---LDSGR---------LDT-DLV 145 (703)
Q Consensus 107 as~s~d-----g~I~vwd~~~~~-----------------------~~~~~~~~~~---~~~~~---------~~~-~~~ 145 (703)
++++.+ +.|++||++++. .+..+.-+.+ +..+. ... ...
T Consensus 131 ~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~ 210 (369)
T 3zwl_B 131 LAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTKGKYIIAGHKDGKISKYDVSNNYEY 210 (369)
T ss_dssp EEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGGGCEEEEEETTSEEEEEETTTTTEE
T ss_pred EEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCCCCEEEEEcCCCEEEEEECCCCcEe
Confidence 777777 777777775432 1111111000 00000 000 111
Q ss_pred hhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC
Q psy7108 146 TREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET 225 (703)
Q Consensus 146 ~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~ 225 (703)
......|...|.+++|+|++++|++++.|+.|++||+++++.+..+.. ...+..++|+|+++.+++++.++
T Consensus 211 ~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~---------~~~~~~~~~~~~~~~l~~~~~~~ 281 (369)
T 3zwl_B 211 VDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKYET---------DCPLNTAVITPLKEFIILGGGQE 281 (369)
T ss_dssp EEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEEC---------SSCEEEEEECSSSSEEEEEECCC
T ss_pred EEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeeecC---------CCCceeEEecCCCceEEEeecCC
Confidence 122334667999999999999999999999999999999998888762 23788999999999999887654
Q ss_pred C--------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108 226 H--------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV 284 (703)
Q Consensus 226 ~--------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~ 284 (703)
. ..+...+++||..+++....+.+|...|.+++|+|++++|++++.|| |++|+++.+..
T Consensus 282 ~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 282 AKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp -------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred CceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 1 11223799999999999999999999999999999999999999999 99999986543
No 76
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.94 E-value=2.9e-26 Score=240.06 Aligned_cols=221 Identities=17% Similarity=0.218 Sum_probs=171.9
Q ss_pred ceeecc-CCC--ccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecC
Q psy7108 28 VKKGDM-AAR--VLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~-tg~--~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spd 102 (703)
+++||. +++ ++ ..+.+|.++|++++|+|..++++|+||+.|++|++||++++. .......|...|.+++|+|+
T Consensus 37 v~lwd~~~~~~~~~--~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~ 114 (316)
T 3bg1_A 37 VKIFDVRNGGQILI--ADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPH 114 (316)
T ss_dssp EEEEEEETTEEEEE--EEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCT
T ss_pred EEEEEecCCCcEEE--EEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCC
Confidence 555663 343 45 788999999999999861138999999999999999998763 34455679999999999998
Q ss_pred --CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC----------------
Q psy7108 103 --GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---------------- 164 (703)
Q Consensus 103 --g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---------------- 164 (703)
+.+|++|+.|++|++||++++....... ....|...|.+++|+|+
T Consensus 115 ~~g~~lasgs~D~~i~lwd~~~~~~~~~~~-----------------~~~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~ 177 (316)
T 3bg1_A 115 DYGLILACGSSDGAISLLTYTGEGQWEVKK-----------------INNAHTIGCNAVSWAPAVVPGSLIDHPSGQKPN 177 (316)
T ss_dssp TTCSCEEEECSSSCEEEEEECSSSCEEECC-----------------BTTSSSSCBCCCEECCCCCC------CCSCCCC
T ss_pred CCCcEEEEEcCCCCEEEEecCCCCCcceee-----------------eeccccCCcceEEEccccCCccccccccccCcc
Confidence 7899999999999999998763221111 01224457888999987
Q ss_pred -CCEEEEEecCCcEEEEECCCCc---eEEEEEeccCCccccccccceeeeeccCC----CEEEEEcccCCCCCeeEEECC
Q psy7108 165 -GSCILAAGQSKYICIYSSREGI---LLKKFTITQNKSLDGINDFINRRKMTEFG----NVSLIETRETHEGGNVVLKLP 236 (703)
Q Consensus 165 -g~~l~s~s~dg~I~lwD~~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~spdg----~~l~~~~~~~~~~~~~~i~iw 236 (703)
+++|++|+.|++|++||++... +... +.+|...|.+++|+|++ +.+++++.++ .|++|
T Consensus 178 ~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~--------l~~h~~~V~~v~~sp~~~~~~~~las~s~D~------~v~iw 243 (316)
T 3bg1_A 178 YIKRFASGGCDNLIKLWKEEEDGQWKEEQK--------LEAHSDWVRDVAWAPSIGLPTSTIASCSQDG------RVFIW 243 (316)
T ss_dssp CCCBEECCBTTSBCCEEEECTTSCEEEEEC--------CBCCSSCEEEEECCCCSSCSCCEEEEEETTC------EEEEE
T ss_pred ccceEEEecCCCeEEEEEeCCCCccceeee--------cccCCCceEEEEecCCCCCCCceEEEEcCCC------eEEEE
Confidence 4789999999999999997653 3333 34566699999999997 6777777653 89999
Q ss_pred CCCCCc----cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 237 GVKKGD----MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 237 d~~~~~----~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
|+.+.. ....+..|...|.+++|+|++++|++++.|+ |++|+...
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~ 293 (316)
T 3bg1_A 244 TCDDASSNTWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESV 293 (316)
T ss_dssp ECSSTTCCCCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECT
T ss_pred EccCccccchhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECC
Confidence 987631 2234556888999999999999999999999 99999763
No 77
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=1.5e-25 Score=239.67 Aligned_cols=196 Identities=17% Similarity=0.205 Sum_probs=159.6
Q ss_pred CcEEEEEEecCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108 92 SDALCVAYKPDGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL 169 (703)
Q Consensus 92 ~~V~~v~~spdg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~ 169 (703)
..+.+++|||||+++++++ .|++|++||+++++.+..+..+. .|.+++|+|||++++
T Consensus 134 ~~~~~v~fSpDg~~la~as~~~d~~i~iwd~~~~~~~~~~~~~~---------------------~V~~v~fspdg~~l~ 192 (365)
T 4h5i_A 134 DYTKLVYISREGTVAAIASSKVPAIMRIIDPSDLTEKFEIETRG---------------------EVKDLHFSTDGKVVA 192 (365)
T ss_dssp CCEEEEEECTTSSCEEEEESCSSCEEEEEETTTTEEEEEEECSS---------------------CCCEEEECTTSSEEE
T ss_pred cCEEEEEEcCCCCEEEEEECCCCCEEEEeECCCCcEEEEeCCCC---------------------ceEEEEEccCCceEE
Confidence 4588999999999987654 68999999999999988876432 689999999999999
Q ss_pred EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc----ce
Q psy7108 170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM----AA 245 (703)
Q Consensus 170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~----~~ 245 (703)
+++. +.+++|+..++..+.... ..++...+.+++|+|+++.+++++.++. ....+++|+...+.. ..
T Consensus 193 s~s~-~~~~~~~~~~~~~~~~~~------~~~~~~~v~~v~fspdg~~l~~~s~d~~--~~~~i~~~~~~~~~~~~~~~~ 263 (365)
T 4h5i_A 193 YITG-SSLEVISTVTGSCIARKT------DFDKNWSLSKINFIADDTVLIAASLKKG--KGIVLTKISIKSGNTSVLRSK 263 (365)
T ss_dssp EECS-SCEEEEETTTCCEEEEEC------CCCTTEEEEEEEEEETTEEEEEEEESSS--CCEEEEEEEEETTEEEEEEEE
T ss_pred eccc-eeEEEEEeccCcceeeee------cCCCCCCEEEEEEcCCCCEEEEEecCCc--ceeEEeecccccceecceeee
Confidence 9885 567778877777654432 2235568999999999999998876542 224788888776543 34
Q ss_pred eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 246 RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 246 ~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
.+.+|...|++++|||||++||+|+.|+ |+|||+.+++++..+ +.+++|+||+ .+|++++.|+++++ |+
T Consensus 264 ~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg--~~laS~S~D~tvrv-w~ 340 (365)
T 4h5i_A 264 QVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIFKQAHSFAITEVTISPDS--TYVASVSAANTIHI-IK 340 (365)
T ss_dssp EEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEETTSSSSCEEEEEECTTS--CEEEEEETTSEEEE-EE
T ss_pred eecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEecCcccCCEEEEEECCCC--CEEEEEeCCCeEEE-EE
Confidence 5668899999999999999999999999 999999998875443 4689999999 89999999999999 99
Q ss_pred cCc
Q psy7108 318 LNE 320 (703)
Q Consensus 318 l~~ 320 (703)
+..
T Consensus 341 ip~ 343 (365)
T 4h5i_A 341 LPL 343 (365)
T ss_dssp CCT
T ss_pred cCC
Confidence 853
No 78
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=3e-25 Score=236.66 Aligned_cols=224 Identities=14% Similarity=0.246 Sum_probs=181.5
Q ss_pred ceeecc---CCCccccccccCCCcCeEEEEEcCCCC--CCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEe
Q psy7108 28 VKKGDM---AARVLKPEVLSGHEGPVSCIEFSPVLS--STGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYK 100 (703)
Q Consensus 28 v~~~d~---tg~~~~~~~l~gH~~~V~~l~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~s 100 (703)
+++|+. +++++ ..+.+|.++|++++|+| + +++|++|+.||.|++||+.++. .......|...|.+++|+
T Consensus 35 i~iw~~~~~~~~~~--~~~~~h~~~v~~~~~~~--~~~~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~ 110 (379)
T 3jrp_A 35 IKIFEVEGETHKLI--DTLTGHEGPVWRVDWAH--PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 110 (379)
T ss_dssp EEEEEEETTEEEEE--EEECCCSSCEEEEEECC--GGGCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred EEEEecCCCcceee--eEecCCCCcEEEEEeCC--CCCCCEEEEeccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeC
Confidence 666764 45566 78899999999999998 6 8999999999999999998876 455556689999999999
Q ss_pred cC--CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-------------
Q psy7108 101 PD--GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA------------- 163 (703)
Q Consensus 101 pd--g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp------------- 163 (703)
|+ +..+++++.|+.|++||++++.. ...+..|. ..|.+++|+|
T Consensus 111 ~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~--------------------~~v~~~~~~~~~~~~~~~~~~~~ 170 (379)
T 3jrp_A 111 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHA--------------------IGVNSASWAPATIEEDGEHNGTK 170 (379)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCT--------------------TCEEEEEECCCC----------C
T ss_pred CCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCC--------------------CceEEEEEcCccccccccccCCC
Confidence 99 99999999999999999988733 33444443 3899999999
Q ss_pred CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108 164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVKK 240 (703)
Q Consensus 164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~~ 240 (703)
++..+++++.|+.|++||++++........ .+.+|...|.+++|+|+ ++.+++++.++ .|++||+++
T Consensus 171 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~----~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg------~i~iwd~~~ 240 (379)
T 3jrp_A 171 ESRKFVTGGADNLVKIWKYNSDAQTYVLES----TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------TCIIWTQDN 240 (379)
T ss_dssp TTCEEEEEETTSCEEEEEEETTTTEEEEEE----EECCCSSCEEEEEECCCCSSSEEEEEEETTS------CEEEEEESS
T ss_pred CCCEEEEEeCCCeEEEEEecCCCcceeeEE----EEecccCcEeEEEECCCCCCCCeEEEEeCCC------EEEEEeCCC
Confidence 699999999999999999987654322211 12245568999999999 78888877664 799999988
Q ss_pred Cc-----cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108 241 GD-----MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 241 ~~-----~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~ 285 (703)
++ .......|...|.+++|+|+|++|++++.|| |++|++..+...
T Consensus 241 ~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~ 291 (379)
T 3jrp_A 241 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKW 291 (379)
T ss_dssp TTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEE
T ss_pred CCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcc
Confidence 64 2222334888999999999999999999999 999999865443
No 79
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.94 E-value=7.1e-26 Score=240.32 Aligned_cols=243 Identities=13% Similarity=0.156 Sum_probs=200.5
Q ss_pred cccCCCcCeEEEEEcCCCC----CCEEEEEeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEecC----CCEEEE
Q psy7108 42 VLSGHEGPVSCIEFSPVLS----STGMVSASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKPD----GTEIVV 108 (703)
Q Consensus 42 ~l~gH~~~V~~l~~sp~~d----g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~spd----g~~las 108 (703)
...+|.++|++++|+| + ...+++++.++.|++||+.+++....+.. |...|.+++|+|+ +++|++
T Consensus 13 ~~~~h~~~v~~i~~~p--~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~ 90 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNW--HSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAV 90 (366)
T ss_dssp EECTTCSCEEEEEECT--TCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEE
T ss_pred eecCCCCceEEEEEec--ccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEE
Confidence 4568999999999998 4 44566666677999999987765544443 5578999999999 679999
Q ss_pred EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCce
Q psy7108 109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGIL 187 (703)
Q Consensus 109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~ 187 (703)
|+.||.|++||+.+++.+..+.+|.. .|.+++|+| ++++|++++.|+.|++||+++++.
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~--------------------~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~ 150 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGN--------------------AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTL 150 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCS--------------------CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEE
T ss_pred ecCCCEEEEEEchhceEeeeecCCCC--------------------cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeE
Confidence 99999999999999999998887765 899999999 999999999999999999999988
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC------------------
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK------------------ 249 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~------------------ 249 (703)
+..+.. ..++...|.+++|+|+++.+++++.++ .|++||+++++....+..
T Consensus 151 ~~~~~~-----~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 219 (366)
T 3k26_A 151 VAIFGG-----VEGHRDEVLSADYDLLGEKIMSCGMDH------SLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKI 219 (366)
T ss_dssp EEEECS-----TTSCSSCEEEEEECTTSSEEEEEETTS------CEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEE
T ss_pred EEEecc-----cccccCceeEEEECCCCCEEEEecCCC------CEEEEECCCCccccccceeEEecCCCCcccccceee
Confidence 877632 123556899999999999999888764 899999998765544332
Q ss_pred ----------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce--------------ecc------eeeeEEEccc-
Q psy7108 250 ----------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV--------------FDP------FLLDISITPQ- 297 (703)
Q Consensus 250 ----------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~--------------~~~------~~~~~~~spd- 297 (703)
|...|.+++|+ ++++++++.|+ |++||+.++.. ... ....++|+|+
T Consensus 220 ~~~~~~~~~~~~~~v~~~~~~--~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 297 (366)
T 3k26_A 220 HFPDFSTRDIHRNYVDCVRWL--GDLILSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDF 297 (366)
T ss_dssp CCCSEEECSSCSSCCCEEEEE--TTEEEEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECT
T ss_pred ccCccccccCCcceEEEEEEc--CCEEEEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCC
Confidence 88999999999 77999999999 99999987644 111 1245788888
Q ss_pred -hhhhHhhcCCcceEEEEEEecCchh
Q psy7108 298 -SVKEALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 298 -~~~~~l~sg~~~~~l~la~~l~~~~ 322 (703)
+ .++++++.++.+.+ |++....
T Consensus 298 ~~--~~l~~~~~dg~i~v-wd~~~~~ 320 (366)
T 3k26_A 298 WQ--KMLALGNQVGKLYV-WDLEVED 320 (366)
T ss_dssp TS--SEEEEECTTSCEEE-EECCSSS
T ss_pred CC--cEEEEEecCCcEEE-EECCCCC
Confidence 7 88999999999998 9987653
No 80
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.94 E-value=5.7e-26 Score=266.31 Aligned_cols=243 Identities=15% Similarity=0.157 Sum_probs=199.5
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC--ceeEEEecCCCcEEEEEEecC--CCEEEEEECCCeEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET--DTQHETIQLLSDALCVAYKPD--GTEIVVATLDGQLI 116 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~--~~~~~~~~~~~~V~~v~~spd--g~~las~s~dg~I~ 116 (703)
.++.+|.++|++++|+| ++++|++|+.||+|++||+.++ ........|.+.|.+++|+|+ ++.|++|+.||.|+
T Consensus 3 ~~l~gH~~~V~~l~~s~--dg~~latg~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~ 80 (753)
T 3jro_A 3 VIANAHNELIHDAVLDY--YGKRLATCSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVL 80 (753)
T ss_dssp -----CCCCEEEECCCS--SSCCEEEEETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEE
T ss_pred eecccCcceeEEEEECC--CCCeEEEEECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEE
Confidence 67899999999999999 9999999999999999999743 344556679999999999998 99999999999999
Q ss_pred EEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC--CCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108 117 MFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--GSCILAAGQSKYICIYSSREGILLKKFT 192 (703)
Q Consensus 117 vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--g~~l~s~s~dg~I~lwD~~~~~~~~~~~ 192 (703)
+||+++++ ....+.+|.. .|++++|+|+ ++.+++|+.||.|++||++++.......
T Consensus 81 vwd~~~~~~~~~~~~~~h~~--------------------~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~ 140 (753)
T 3jro_A 81 IWKEENGRWSQIAVHAVHSA--------------------SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII 140 (753)
T ss_dssp EEEEETTEEEEEEEECCCSS--------------------CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEE
T ss_pred EEECCCCcccccccccCCCC--------------------CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeE
Confidence 99999886 5555555544 8999999999 9999999999999999999874322221
Q ss_pred eccCCccccccccceeeeecc-------------CCCEEEEEcccCCCCCeeEEECCCCCCC----ccceeecCCccceE
Q psy7108 193 ITQNKSLDGINDFINRRKMTE-------------FGNVSLIETRETHEGGNVVLKLPGVKKG----DMAARVLKPEVRVF 255 (703)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~sp-------------dg~~l~~~~~~~~~~~~~~i~iwd~~~~----~~~~~~~~h~~~V~ 255 (703)
..++...|.+++|+| ++..+++++.++ .|++||++++ .....+.+|...|.
T Consensus 141 ------~~~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg------~I~iwd~~~~~~~~~~~~~~~~h~~~V~ 208 (753)
T 3jro_A 141 ------IDAHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADN------LVKIWKYNSDAQTYVLESTLEGHSDWVR 208 (753)
T ss_dssp ------EECCSSCEEEEEECCCC---------CGGGCCEEEEETTS------CEEEEEEETTTTEEEEEEEECCCSSCEE
T ss_pred ------eecCCCceEEEEecCcccccccccccCCCCCEEEEEECCC------eEEEEeccCCcccceeeeeecCCCCcEE
Confidence 123445899999999 588888888764 7999999877 44556778999999
Q ss_pred EEEEcCC---CCEEEEEeCCC-EEEEEcCCCce-----------ecceeeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 256 CVKFSPT---GQAWVAATTEG-VHIYSLDSGYV-----------FDPFLLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 256 ~l~~spd---g~~l~s~s~Dg-v~iwd~~~~~~-----------~~~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
+++|+|+ ++++++++.|| |++||+.++.. +.....+++|+|++ ..+++++.++.+.+ |+++.
T Consensus 209 ~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg--~~l~s~s~Dg~I~v-wd~~~ 285 (753)
T 3jro_A 209 DVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSG--NVLALSGGDNKVTL-WKENL 285 (753)
T ss_dssp EEEECCCCSSSEEEEEEESSSCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTT--CCEEEECSSSCEEC-CBCCS
T ss_pred EEEeccCCCCCCEEEEEecCCEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCC--CEEEEEcCCCEEEE-EecCC
Confidence 9999999 89999999999 99999988631 12234678999999 88999999999998 98874
No 81
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.94 E-value=1.9e-25 Score=238.88 Aligned_cols=206 Identities=15% Similarity=0.153 Sum_probs=165.1
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEE--eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSA--SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sg--s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~ 122 (703)
.+...+.+++|+| ||++++++ +.|++|+|||+.+++.... ..|.+.|.+++|+|||+++++++. +.+.+|+..+
T Consensus 131 ~~~~~~~~v~fSp--Dg~~la~as~~~d~~i~iwd~~~~~~~~~-~~~~~~V~~v~fspdg~~l~s~s~-~~~~~~~~~~ 206 (365)
T 4h5i_A 131 NADDYTKLVYISR--EGTVAAIASSKVPAIMRIIDPSDLTEKFE-IETRGEVKDLHFSTDGKVVAYITG-SSLEVISTVT 206 (365)
T ss_dssp CTTCCEEEEEECT--TSSCEEEEESCSSCEEEEEETTTTEEEEE-EECSSCCCEEEECTTSSEEEEECS-SCEEEEETTT
T ss_pred CcccCEEEEEEcC--CCCEEEEEECCCCCEEEEeECCCCcEEEE-eCCCCceEEEEEccCCceEEeccc-eeEEEEEecc
Confidence 4556799999999 99998755 4789999999998865544 468889999999999999999975 5677777777
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----cEEEEECCCCceEEEEEeccCCc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK----YICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg----~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
++........ .|...|.+++|+|+++.+++++.|+ .+++||+.......... ..
T Consensus 207 ~~~~~~~~~~------------------~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~----~~ 264 (365)
T 4h5i_A 207 GSCIARKTDF------------------DKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRS----KQ 264 (365)
T ss_dssp CCEEEEECCC------------------CTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEE----EE
T ss_pred CcceeeeecC------------------CCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceee----ee
Confidence 7665433221 1334799999999999999998887 68899988765422111 11
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cCCccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LKPEVRVFCVKFSPTGQAWVAATTEG-VHI 276 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~h~~~V~~l~~spdg~~l~s~s~Dg-v~i 276 (703)
+.++...|++++|+|+|+++++++.++ .|++||+++++++..+ .+|...|++++|||||++||+++.|+ |+|
T Consensus 265 ~~~~~~~V~~~~~Spdg~~lasgs~D~------~V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrv 338 (365)
T 4h5i_A 265 VTNRFKGITSMDVDMKGELAVLASNDN------SIALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHI 338 (365)
T ss_dssp EESSCSCEEEEEECTTSCEEEEEETTS------CEEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEE
T ss_pred ecCCCCCeEeEEECCCCCceEEEcCCC------EEEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEE
Confidence 223455899999999999999988764 8999999999988775 68999999999999999999999999 999
Q ss_pred EEcCCC
Q psy7108 277 YSLDSG 282 (703)
Q Consensus 277 wd~~~~ 282 (703)
|+++..
T Consensus 339 w~ip~~ 344 (365)
T 4h5i_A 339 IKLPLN 344 (365)
T ss_dssp EECCTT
T ss_pred EEcCCC
Confidence 999654
No 82
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.94 E-value=1.5e-24 Score=247.35 Aligned_cols=257 Identities=11% Similarity=0.140 Sum_probs=212.9
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCC---cEEEEEEecC-
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPD- 102 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spd- 102 (703)
+..|| +++.+ ..+.+|.+.|++++|+| +++ .+++++.|+.|++||+.+++....+..|.. .|.+++|+|+
T Consensus 144 v~~~d-~~~~~--~~~~~~~~~v~~~~~~~--~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 218 (615)
T 1pgu_A 144 FISWD-SGNSL--GEVSGHSQRINACHLKQ--SRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDS 218 (615)
T ss_dssp EEETT-TCCEE--EECCSCSSCEEEEEECS--SSSCEEEEEETTTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTT
T ss_pred EEEEE-CCCcc--eeeecCCccEEEEEECC--CCCcEEEEEeCCCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCC
Confidence 44566 66777 88999999999999999 887 899999999999999988877777777888 9999999999
Q ss_pred CCEEEEEECCCeEEEEEcCCCcEEEEE-e---ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108 103 GTEIVVATLDGQLIMFDVESAAQVGSV-E---ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC 178 (703)
Q Consensus 103 g~~las~s~dg~I~vwd~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~ 178 (703)
+++|++++.|+.|++||+++++.+..+ . .|. ..|.+++|+ ++++|++++.|+.|+
T Consensus 219 ~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~--------------------~~v~~~~~~-~~~~l~~~~~d~~i~ 277 (615)
T 1pgu_A 219 GEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQ--------------------GGIFALSWL-DSQKFATVGADATIR 277 (615)
T ss_dssp CCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCC--------------------SCEEEEEES-SSSEEEEEETTSEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCCEeEEecccccccC--------------------CceEEEEEc-CCCEEEEEcCCCcEE
Confidence 999999999999999999999988887 4 443 378888888 888888888888888
Q ss_pred EEECCCCceEEEEEecc---------------------------------------------------------------
Q psy7108 179 IYSSREGILLKKFTITQ--------------------------------------------------------------- 195 (703)
Q Consensus 179 lwD~~~~~~~~~~~~~~--------------------------------------------------------------- 195 (703)
+||+++++.+..+..+.
T Consensus 278 ~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~g~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~l~~~~~dg 357 (615)
T 1pgu_A 278 VWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRIISLSLDGTLNFYELGHDEVLKTISGHNKGITALTVNPLISGSYDG 357 (615)
T ss_dssp EEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEEEEETTSCEEEEETTEEEEEEEECCCSSCEEEEETTTTEEEETTS
T ss_pred EEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEEEEECCCCEEEEECCCCcEEEEEeCCCCCEEEEEecCcEEECCCC
Confidence 88887665544433220
Q ss_pred --------------------------------------------------------------------------------
Q psy7108 196 -------------------------------------------------------------------------------- 195 (703)
Q Consensus 196 -------------------------------------------------------------------------------- 195 (703)
T Consensus 358 ~i~~w~~~~~~~~~~~~v~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~ 437 (615)
T 1pgu_A 358 RIMEWSSSSMHQDHSNLIVSLDNSKAQEYSSISWDDTLKVNGITKHEFGSQPKVASANNDGFTAVLTNDDDLLILQSFTG 437 (615)
T ss_dssp CEEETTTTEEECCCCSCEEEEECCSTTCCEEEETTTEEEETTEEEEECSSCEEEEEECSSSEEEEEETTSEEEEEETTTC
T ss_pred eEEEEEchhhcCcccCceEEEEECCCcEEEEEeCCCCEEEEEcccCcccCCceEEEEcCCCCEEEEeCCCceEEEeccCC
Confidence
Q ss_pred -----------------------------C--------------CccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108 196 -----------------------------N--------------KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV 232 (703)
Q Consensus 196 -----------------------------~--------------~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 232 (703)
+ ....++...|.+++|+|+|+++++++.++ .
T Consensus 438 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg------~ 511 (615)
T 1pgu_A 438 DIIKSVRLNSPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMG------K 511 (615)
T ss_dssp CEEEEEECSSCEEEEEECSSEEEEEETTTSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTS------C
T ss_pred ceeeecccCCCceEEEEcCCEEEEeecCCCeEEEEECCCccccccccCCccCceEEEEECCCCCEEEEcCCCC------e
Confidence 0 11223456788899999999998887764 7
Q ss_pred EECCCCCCCccceeecC-CccceEEEEEcC----------CCCEEEEEeCCC-EEEEEcCCC-ceec------ceeeeEE
Q psy7108 233 LKLPGVKKGDMAARVLK-PEVRVFCVKFSP----------TGQAWVAATTEG-VHIYSLDSG-YVFD------PFLLDIS 293 (703)
Q Consensus 233 i~iwd~~~~~~~~~~~~-h~~~V~~l~~sp----------dg~~l~s~s~Dg-v~iwd~~~~-~~~~------~~~~~~~ 293 (703)
|++||+.+++.+..+.+ |...|++++|+| ++++|++++.|+ |++|++.++ +... ....+++
T Consensus 512 i~iw~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~~~~~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~h~~~v~~l~ 591 (615)
T 1pgu_A 512 ILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLL 591 (615)
T ss_dssp EEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEE
T ss_pred EEEeeCCCCcceeEeecCCCCceeEEEEcCccccccccccCCCEEEEEcCCCcEEEEECCCCceechhhhcCccceEEEE
Confidence 99999999998888887 999999999999 999999999999 999999987 4433 2347799
Q ss_pred EccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 294 ITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 294 ~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
|+|++ . +++++.++.+++ |+++.
T Consensus 592 ~s~~~--~-l~s~~~d~~v~i-w~~~~ 614 (615)
T 1pgu_A 592 WETPS--T-LVSSGADACIKR-WNVVL 614 (615)
T ss_dssp EEETT--E-EEEEETTSCEEE-EEEC-
T ss_pred EcCCC--C-eEEecCCceEEE-Eeeec
Confidence 99999 6 899999999998 98763
No 83
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.94 E-value=4.5e-26 Score=246.28 Aligned_cols=256 Identities=16% Similarity=0.141 Sum_probs=169.2
Q ss_pred cCCceEEecCCceeecc-CCCccccccccCCCcCeEEEEEcCC------CCCCEEEEEeCCCcEEEEEcCCCceeEEEec
Q psy7108 17 EGGNVVLKLPGVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPV------LSSTGMVSASWDKTVKLWNAVETDTQHETIQ 89 (703)
Q Consensus 17 ~~~~~~i~~~~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~------~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~ 89 (703)
.+.+..+++|+.+.... ....+ ..+.||.+.|++++|+|. .|+++|||||.|++|+|||+.++.+......
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~--~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~~~~~~~~~~ 184 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVL--GGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTDEGPILAGYP 184 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEE--CTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEETTEEEEEEEE
T ss_pred EeCCCcEEEEECCCCccceeeee--cccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCCCceeeeecC
Confidence 33444555555442211 11233 578999999999999861 1578999999999999999988888888889
Q ss_pred CCCcEEEEEEecCCC-EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC-----CCCccchhhcccCCccEEEEEEc-
Q psy7108 90 LLSDALCVAYKPDGT-EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR-----LDTDLVTREQSLKAKAVSTVCYS- 162 (703)
Q Consensus 90 ~~~~V~~v~~spdg~-~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~V~~i~~s- 162 (703)
|.+.|.+++|+|++. +|++++.|++|++||+++++.......+....... ............|...+.++.|+
T Consensus 185 ~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~ 264 (393)
T 4gq1_A 185 LSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIG 264 (393)
T ss_dssp CSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEET
T ss_pred CCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeec
Confidence 999999999999885 79999999999999999987765554433211110 00011112234567788999986
Q ss_pred CCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc-----------cccccccceeeeecc-CCCEEEEEcccCCCCCe
Q psy7108 163 ADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS-----------LDGINDFINRRKMTE-FGNVSLIETRETHEGGN 230 (703)
Q Consensus 163 pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-----------~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~ 230 (703)
||++.|++++.|+++++||+.++.....+..+.... .... .......++| .+..++++++.+
T Consensus 265 ~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~sgs~D----- 338 (393)
T 4gq1_A 265 SDGSGILAMCKSGAWLRWNLFANNDYNEISDSTMKLGPKNLLPNVQGISLF-PSLLGACPHPRYMDYFATAHSQH----- 338 (393)
T ss_dssp TTTCEEEEECTTSEEEEEEC-------------------CCSCSEEEECSS-CCSSCCEECSSCTTEEEEEETTT-----
T ss_pred CCCCEEEEEeCCCCEEEEECccCCCCceEeeecCccccEEEcccccccccc-CcceeEEEccCCCCEEEEEECCC-----
Confidence 799999999999999999999877665554332210 0011 1222233443 344444444322
Q ss_pred eEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108 231 VVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280 (703)
Q Consensus 231 ~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~ 280 (703)
..|++||..+++.......|...|.+++|||||++||+++.+|+.+|.+.
T Consensus 339 g~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~~LA~as~~Gv~lvrL~ 388 (393)
T 4gq1_A 339 GLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGSVLLTRLM 388 (393)
T ss_dssp TEEEEEETTCTTCCEEEEECSSCEEEEEECTTSSEEEEEESSEEEEEEEG
T ss_pred CEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEEe
Confidence 38999999999988888889999999999999999999999998888764
No 84
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.94 E-value=1.2e-25 Score=236.01 Aligned_cols=239 Identities=15% Similarity=0.221 Sum_probs=185.2
Q ss_pred ceeeccC-C----CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---------eeEEEecCCCc
Q psy7108 28 VKKGDMA-A----RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---------TQHETIQLLSD 93 (703)
Q Consensus 28 v~~~d~t-g----~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---------~~~~~~~~~~~ 93 (703)
+++|+.. + ++. ..+.+|.++|++++|+|..++++|++|+.||+|++||+.++. .......|...
T Consensus 35 i~iw~~~~~~~~~~~~--~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (351)
T 3f3f_A 35 IKVFKLDKDTSNWELS--DSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGS 112 (351)
T ss_dssp EEEEEECSSSCCEEEE--EEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEECCCSSC
T ss_pred EEEEECCCCCCcceec--ceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEecCCCcccccccCcceeeeecccCCc
Confidence 5556533 2 355 778899999999999982128999999999999999998763 35556679999
Q ss_pred EEEEEEecC--CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEE
Q psy7108 94 ALCVAYKPD--GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCI 168 (703)
Q Consensus 94 V~~v~~spd--g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l 168 (703)
|.+++|+|+ ++++++++.|+.|++||+++++.+..+...... .........+...+.+++|+|+ +..+
T Consensus 113 v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~p~~~~~~~l 185 (351)
T 3f3f_A 113 LYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEM-------KVLSIPPANHLQSDFCLSWCPSRFSPEKL 185 (351)
T ss_dssp EEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEE-------ESCSCCCSSCSCCCEEEEECCCSSSCCEE
T ss_pred eeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccc-------cccccccCCcccceeEEEeccCCCCCcEE
Confidence 999999999 999999999999999999887654333221110 0011112245668999999997 9999
Q ss_pred EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC----CEEEEEcccCCCCCeeEEECCCCCCC---
Q psy7108 169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG----NVSLIETRETHEGGNVVLKLPGVKKG--- 241 (703)
Q Consensus 169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg----~~l~~~~~~~~~~~~~~i~iwd~~~~--- 241 (703)
++++.|+.+.+|+...++...... ..+|...|.+++|+|++ +.+++++.++ .|++||++++
T Consensus 186 ~~~~~~~~~~~~~~~~~~~~~~~~------~~~h~~~i~~~~~~p~~~~~~~~l~s~~~dg------~i~iwd~~~~~~~ 253 (351)
T 3f3f_A 186 AVSALEQAIIYQRGKDGKLHVAAK------LPGHKSLIRSISWAPSIGRWYQLIATGCKDG------RIRIFKITEKLSP 253 (351)
T ss_dssp EEEETTEEEEEEECTTSCEEEEEE------CCCCCSCEEEEEECCCSSCSSEEEEEEETTS------CEEEEEEEECC--
T ss_pred EEecCCCcEEEEccCCCceeeeee------cCCCCcceeEEEECCCCCCcceEEEEEcCCC------eEEEEeCCCCcCc
Confidence 999999999888888776532222 23455689999999998 6777777653 7999998864
Q ss_pred -------------------------------------------ccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108 242 -------------------------------------------DMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY 277 (703)
Q Consensus 242 -------------------------------------------~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw 277 (703)
+.+..+.+|...|++++|+|++++|++++.|| |++|
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw 333 (351)
T 3f3f_A 254 LASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 333 (351)
T ss_dssp -------------------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEE
T ss_pred cccCCcccceeccCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEE
Confidence 45566678999999999999999999999999 9999
Q ss_pred EcCCCceecc
Q psy7108 278 SLDSGYVFDP 287 (703)
Q Consensus 278 d~~~~~~~~~ 287 (703)
++.+++....
T Consensus 334 ~~~~~~~~~~ 343 (351)
T 3f3f_A 334 KATYSNEFKC 343 (351)
T ss_dssp EECTTSCEEE
T ss_pred ecCcCcchhh
Confidence 9998766543
No 85
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1e-25 Score=246.48 Aligned_cols=205 Identities=14% Similarity=0.175 Sum_probs=168.5
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC---CCceeEEEe----------c--CCCcEEEEE--EecCCCEEE
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV---ETDTQHETI----------Q--LLSDALCVA--YKPDGTEIV 107 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~---~~~~~~~~~----------~--~~~~V~~v~--~spdg~~la 107 (703)
+|.++|++++|+| ++++|++|+.||+|++||+. +++...... . +...+.++. +++++..|+
T Consensus 109 ~h~~~v~~~~~~~--~~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 186 (437)
T 3gre_A 109 DCSSTVTQITMIP--NFDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLV 186 (437)
T ss_dssp ECSSCEEEEEECT--TSSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEE
T ss_pred cCCCCEEEEEEeC--CCCEEEEEeCCCEEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEE
Confidence 6999999999999 99999999999999999994 443222111 1 456677777 568899999
Q ss_pred EEECCCeEEEEEcCCCcEEEEEec--cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEA--RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG 185 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~ 185 (703)
+++.|+.|++||+++++.+..+.+ |.. .|++++|+|++++|++|+.|+.|++||++++
T Consensus 187 ~~~~d~~i~iwd~~~~~~~~~~~~~~h~~--------------------~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 187 ALTNLSRVIIFDIRTLERLQIIENSPRHG--------------------AVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp EEETTSEEEEEETTTCCEEEEEECCGGGC--------------------CEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred EEeCCCeEEEEeCCCCeeeEEEccCCCCC--------------------ceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 999999999999999999999887 443 8999999999999999999999999999999
Q ss_pred ceEEEEEeccCCccccccccceee----eeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC------------
Q psy7108 186 ILLKKFTITQNKSLDGINDFINRR----KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK------------ 249 (703)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~v~~~----~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~------------ 249 (703)
+++..+... +...|.++ .|++++..+++++.+ ..|++||++++++...+.+
T Consensus 247 ~~~~~~~~~-------~~~~v~~~~~~~~~s~~~~~l~s~~~d------g~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 313 (437)
T 3gre_A 247 VLIRSWSFG-------DHAPITHVEVCQFYGKNSVIVVGGSSK------TFLTIWNFVKGHCQYAFINSDEQPSMEHFLP 313 (437)
T ss_dssp EEEEEEBCT-------TCEEEEEEEECTTTCTTEEEEEEESTT------EEEEEEETTTTEEEEEEESSSSCCCGGGGSC
T ss_pred cEEEEEecC-------CCCceEEEEeccccCCCccEEEEEcCC------CcEEEEEcCCCcEEEEEEcCCCCCccceecc
Confidence 888877521 23478888 455667788887766 4899999998876555442
Q ss_pred --------------CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108 250 --------------PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 250 --------------h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~ 285 (703)
|...|++++|+ ++++|++++.|+ |++||+.+++..
T Consensus 314 ~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~~~~~~~ 363 (437)
T 3gre_A 314 IEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSLNELSSS 363 (437)
T ss_dssp BCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEETTCGGGC
T ss_pred cccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEECCCcccc
Confidence 56678899999 778999999999 999999887653
No 86
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.94 E-value=1.4e-25 Score=237.30 Aligned_cols=245 Identities=13% Similarity=0.184 Sum_probs=198.4
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEE-EEEeC---CCcEEEEEcCCCceeE-EEecCCCcEEEEEEecC---CCEEEEEECC
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGM-VSASW---DKTVKLWNAVETDTQH-ETIQLLSDALCVAYKPD---GTEIVVATLD 112 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~---Dg~V~iWd~~~~~~~~-~~~~~~~~V~~v~~spd---g~~las~s~d 112 (703)
..+.+|.+.|++++|+| ++..+ ++|+. ||.|++||+.+++... ....|...|.+++|+|+ +++|++++.|
T Consensus 12 ~~~~~h~~~v~~~~~~p--~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~d 89 (357)
T 3i2n_A 12 HIQKGFNYTVFDCKWVP--CSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFG 89 (357)
T ss_dssp EEEEECSSCEEEEEECT--TSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETT
T ss_pred hhccCCCCceEEEEEcC--CCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCC
Confidence 56688999999999999 88655 56665 9999999998876543 34479999999999999 6999999999
Q ss_pred CeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEE------EcCCCCEEEEEecCCcEEEEECCCC
Q psy7108 113 GQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC------YSADGSCILAAGQSKYICIYSSREG 185 (703)
Q Consensus 113 g~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~------~spdg~~l~s~s~dg~I~lwD~~~~ 185 (703)
|.|++||+++++ .+..+.+|.. .|.+++ |+|+++.|++++.|+.|++||++++
T Consensus 90 g~i~iwd~~~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~ 149 (357)
T 3i2n_A 90 GNLHIWNLEAPEMPVYSVKGHKE--------------------IINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQK 149 (357)
T ss_dssp SCEEEECTTSCSSCSEEECCCSS--------------------CEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSC
T ss_pred CeEEEEeCCCCCccEEEEEeccc--------------------ceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCC
Confidence 999999999887 7777777654 899995 5789999999999999999999988
Q ss_pred c-eEEEEEeccCCccccccccceeee----eccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEc
Q psy7108 186 I-LLKKFTITQNKSLDGINDFINRRK----MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFS 260 (703)
Q Consensus 186 ~-~~~~~~~~~~~~~~~~~~~v~~~~----~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~s 260 (703)
. .+..+..+... ....+.+++ |+|+++.+++++.++ .|++||+++++.. ....|...|.+++|+
T Consensus 150 ~~~~~~~~~~~~~----~~~~v~~~~~~~~~~~~~~~l~~~~~d~------~i~i~d~~~~~~~-~~~~~~~~v~~~~~~ 218 (357)
T 3i2n_A 150 DDPVANMEPVQGE----NKRDCWTVAFGNAYNQEERVVCAGYDNG------DIKLFDLRNMALR-WETNIKNGVCSLEFD 218 (357)
T ss_dssp SSCSEEECCCTTS----CCCCEEEEEEECCCC-CCCEEEEEETTS------EEEEEETTTTEEE-EEEECSSCEEEEEES
T ss_pred CCcceeccccCCC----CCCceEEEEEEeccCCCCCEEEEEccCC------eEEEEECccCcee-eecCCCCceEEEEcC
Confidence 6 66666544331 123566666 789999999888764 8999999988764 346688899999999
Q ss_pred C---CCCEEEEEeCCC-EEEEEcCCCceecc-----------eeeeEEEccchhhh-HhhcCCcceEEEEEEecCch
Q psy7108 261 P---TGQAWVAATTEG-VHIYSLDSGYVFDP-----------FLLDISITPQSVKE-ALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 261 p---dg~~l~s~s~Dg-v~iwd~~~~~~~~~-----------~~~~~~~spd~~~~-~l~sg~~~~~l~la~~l~~~ 321 (703)
| +++.+++++.|| |++||+.+++.... ...+++|+|++ . ++++++.++.+.+ |++...
T Consensus 219 ~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~dg~i~i-wd~~~~ 292 (357)
T 3i2n_A 219 RKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEKAHKSTVWQVRHLPQN--RELFLTAGGAGGLHL-WKYEYP 292 (357)
T ss_dssp CSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEECCSSCEEEEEEETTE--EEEEEEEETTSEEEE-EEEECC
T ss_pred CCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccCCCcCCEEEEEECCCC--CcEEEEEeCCCcEEE-eecCCC
Confidence 9 999999999999 99999987654322 23678999998 6 7899999999998 887644
No 87
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.94 E-value=1.2e-24 Score=269.49 Aligned_cols=259 Identities=14% Similarity=0.228 Sum_probs=224.1
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec--CCC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP--DGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp--dg~ 104 (703)
+++|| .+++.+ ..+.+|.+.|.+++|+| ++++|++|+.||+|++||+.+++.......|...|.+++|+| ++.
T Consensus 639 i~vw~~~~~~~~--~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 714 (1249)
T 3sfz_A 639 LQVFKAETGEKL--LDIKAHEDEVLCCAFSS--DDSYIATCSADKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHL 714 (1249)
T ss_dssp EEEEETTTCCEE--EEECCCSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCC
T ss_pred EEEEECCCCCEE--EEeccCCCCEEEEEEec--CCCEEEEEeCCCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCce
Confidence 67777 578888 89999999999999999 999999999999999999999988888888999999999999 456
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108 105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184 (703)
Q Consensus 105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~ 184 (703)
.+++|+.|+.|++||+++++....+.+|.. .|++++|+|+++.+++++.||.|++||+++
T Consensus 715 ~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~--------------------~v~~~~~sp~~~~l~s~s~dg~v~vwd~~~ 774 (1249)
T 3sfz_A 715 LLATGSNDFFLKLWDLNQKECRNTMFGHTN--------------------SVNHCRFSPDDELLASCSADGTLRLWDVRS 774 (1249)
T ss_dssp EEEEEETTSCEEEEETTSSSEEEEECCCSS--------------------CEEEEEECSSTTEEEEEESSSEEEEEEGGG
T ss_pred EEEEEeCCCeEEEEECCCcchhheecCCCC--------------------CEEEEEEecCCCEEEEEECCCeEEEEeCCC
Confidence 899999999999999999999988888765 899999999999999999999999999999
Q ss_pred CceEEEEEeccC-----CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEE
Q psy7108 185 GILLKKFTITQN-----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVK 258 (703)
Q Consensus 185 ~~~~~~~~~~~~-----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~ 258 (703)
+.....+..... .........+.+++|+|+|+.+++++.+ .+.+||..++....... +|...|.+++
T Consensus 775 ~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~l~~~~~~-------~v~~~d~~~~~~~~~~~~~~~~~v~~~~ 847 (1249)
T 3sfz_A 775 ANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDKIIVAAKN-------KVLLFDIHTSGLLAEIHTGHHSTIQYCD 847 (1249)
T ss_dssp TEEEEEEECCCCC--------CCCCCBCCCCBCTTSSEEEEEETT-------EEEEEETTTCCEEEEEECSSSSCCCEEE
T ss_pred CcccceecccccccccCCccccccceEEEEEECCCCCEEEEEcCC-------cEEEEEecCCCceeEEcCCCCCceEEEE
Confidence 988777654321 1112233478899999999999887743 69999999988776665 7889999999
Q ss_pred EcCCCCEEEEEeCCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 259 FSPTGQAWVAATTEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 259 ~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
|+|+++.+++++.|+ |++|++.++.....+ ..+++|+|++ ..+++++.++.+++ |++..
T Consensus 848 ~sp~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg--~~l~s~s~dg~v~v-w~~~~ 913 (1249)
T 3sfz_A 848 FSPYDHLAVIALSQYCVELWNIDSRLKVADCRGHLSWVHGVMFSPDG--SSFLTASDDQTIRV-WETKK 913 (1249)
T ss_dssp ECSSTTEEEEECSSSCEEEEETTTTEEEEEECCCSSCEEEEEECTTS--SEEEEEETTSCEEE-EEHHH
T ss_pred EcCCCCEEEEEeCCCeEEEEEcCCCceeeecCCCccceEEEEECCCC--CEEEEEeCCCeEEE-EEccc
Confidence 999999999999999 999999988765443 4679999999 78999999999998 88653
No 88
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.9e-25 Score=235.26 Aligned_cols=237 Identities=13% Similarity=0.213 Sum_probs=195.4
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEecCCCcEEEEEEecCCC-EEEEEECCCeEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETIQLLSDALCVAYKPDGT-EIVVATLDGQLI 116 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~~~~~~V~~v~~spdg~-~las~s~dg~I~ 116 (703)
....+|.+.|++++|+| ++++|++++.||.|++|++.++. .......|...|.+++|+|+++ +|++++.||.|+
T Consensus 5 ~~~~~h~~~v~~~~~s~--~~~~l~~~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 82 (342)
T 1yfq_A 5 QIEQAPKDYISDIKIIP--SKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVGTVQGEIL 82 (342)
T ss_dssp ECSSCCSSCEEEEEEEG--GGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEEETTSCEE
T ss_pred ecccCCCCcEEEEEEcC--CCCEEEEEcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEEcCCCeEE
Confidence 44568999999999999 99999999999999999998776 3556668999999999999999 999999999999
Q ss_pred EEEc-CCCcEEEEEec--cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC---------
Q psy7108 117 MFDV-ESAAQVGSVEA--RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE--------- 184 (703)
Q Consensus 117 vwd~-~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~--------- 184 (703)
+||+ .+++. ..+.+ |. ..|.+++|+| ++.+++++.|+.|++||+++
T Consensus 83 ~wd~~~~~~~-~~~~~~~~~--------------------~~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~ 140 (342)
T 1yfq_A 83 KVDLIGSPSF-QALTNNEAN--------------------LGICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVK 140 (342)
T ss_dssp EECSSSSSSE-EECBSCCCC--------------------SCEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEE
T ss_pred EEEeccCCce-EeccccCCC--------------------CceEEEEeCC-CCEEEEEcCCCeEEEEccccccccccccc
Confidence 9999 87765 44544 43 4899999999 99999999999999999986
Q ss_pred CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Ccc--ceeecCCccceEEEEEcC
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDM--AARVLKPEVRVFCVKFSP 261 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~--~~~~~~h~~~V~~l~~sp 261 (703)
++++..+ . +...+.+++|+|++ +++++.++ .|++||+++ +.. ......|...+.+++|+|
T Consensus 141 ~~~~~~~--------~-~~~~v~~~~~~~~~--l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~ 203 (342)
T 1yfq_A 141 NLNSNNT--------K-VKNKIFTMDTNSSR--LIVGMNNS------QVQWFRLPLCEDDNGTIEESGLKYQIRDVALLP 203 (342)
T ss_dssp ESCSSSS--------S-SCCCEEEEEECSSE--EEEEESTT------EEEEEESSCCTTCCCEEEECSCSSCEEEEEECS
T ss_pred CCeeeEE--------e-eCCceEEEEecCCc--EEEEeCCC------eEEEEECCccccccceeeecCCCCceeEEEECC
Confidence 4333222 1 45689999999988 66665543 899999988 543 334456888999999999
Q ss_pred -CCCEEEEEeCCC-EEEEEcCCC------ce------ecc---------eeeeEEEccchhhhHhhcCCcceEEEEEEec
Q psy7108 262 -TGQAWVAATTEG-VHIYSLDSG------YV------FDP---------FLLDISITPQSVKEALADKDYAKALMMSLKL 318 (703)
Q Consensus 262 -dg~~l~s~s~Dg-v~iwd~~~~------~~------~~~---------~~~~~~~spd~~~~~l~sg~~~~~l~la~~l 318 (703)
+++++++++.|| +++|+++.. +. +.. ...+++|+|++ .++++++.++.+.+ |++
T Consensus 204 ~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~--~~l~~~~~dg~i~v-wd~ 280 (342)
T 1yfq_A 204 KEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRH--KFLYTAGSDGIISC-WNL 280 (342)
T ss_dssp GGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTT--CCEEEEETTSCEEE-EET
T ss_pred CCCCEEEEEecCCcEEEEEEcCCCcccccccceeeecccccccccccceeEEEEEEcCCC--CEEEEecCCceEEE-EcC
Confidence 999999999999 999999876 22 111 45678999999 78999999999998 988
Q ss_pred Cch
Q psy7108 319 NEQ 321 (703)
Q Consensus 319 ~~~ 321 (703)
...
T Consensus 281 ~~~ 283 (342)
T 1yfq_A 281 QTR 283 (342)
T ss_dssp TTT
T ss_pred ccH
Confidence 754
No 89
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.93 E-value=2e-24 Score=233.76 Aligned_cols=221 Identities=14% Similarity=0.208 Sum_probs=183.3
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEEecCCCcEEEEEEecCCCE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHETIQLLSDALCVAYKPDGTE 105 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~~~~~~~V~~v~~spdg~~ 105 (703)
+++|| .+++.+ ..+.+|...|.+++|++ +.|++|+.||.|++||+.. .........|.+.|.+++|+|+++.
T Consensus 158 i~iwd~~~~~~~--~~~~~~~~~v~~~~~~~----~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~ 231 (401)
T 4aez_A 158 VDIYDVESQTKL--RTMAGHQARVGCLSWNR----HVLSSGSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSDGLQ 231 (401)
T ss_dssp EEEEETTTCCEE--EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred EEEEECcCCeEE--EEecCCCCceEEEEECC----CEEEEEcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCCCCE
Confidence 67777 467777 89999999999999965 7999999999999999984 4456666779999999999999999
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEe--cCCcEEEEEC
Q psy7108 106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAG--QSKYICIYSS 182 (703)
Q Consensus 106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s--~dg~I~lwD~ 182 (703)
|++++.|+.|++||+++++....+..|.. .|.+++|+|++. .+++++ .|+.|++||+
T Consensus 232 l~s~~~d~~v~iwd~~~~~~~~~~~~~~~--------------------~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~ 291 (401)
T 4aez_A 232 LASGGNDNVVQIWDARSSIPKFTKTNHNA--------------------AVKAVAWCPWQSNLLATGGGTMDKQIHFWNA 291 (401)
T ss_dssp EEEEETTSCEEEEETTCSSEEEEECCCSS--------------------CCCEEEECTTSTTEEEEECCTTTCEEEEEET
T ss_pred EEEEeCCCeEEEccCCCCCccEEecCCcc--------------------eEEEEEECCCCCCEEEEecCCCCCEEEEEEC
Confidence 99999999999999999998888877654 899999999775 555554 6999999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEEEEEc
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFCVKFS 260 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~l~~s 260 (703)
++++++..+.. ...+.+++|+|+++.++++++.. + ..|++||+.+++... .+.+|...|.+++|+
T Consensus 292 ~~~~~~~~~~~---------~~~v~~~~~s~~~~~l~~~~g~~-d---g~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s 358 (401)
T 4aez_A 292 ATGARVNTVDA---------GSQVTSLIWSPHSKEIMSTHGFP-D---NNLSIWSYSSSGLTKQVDIPAHDTRVLYSALS 358 (401)
T ss_dssp TTCCEEEEEEC---------SSCEEEEEECSSSSEEEEEECTT-T---CEEEEEEEETTEEEEEEEEECCSSCCCEEEEC
T ss_pred CCCCEEEEEeC---------CCcEEEEEECCCCCeEEEEeecC-C---CcEEEEecCCccceeEEEecCCCCCEEEEEEC
Confidence 99998888752 23789999999999998864211 1 389999999865443 456899999999999
Q ss_pred CCCCEEEEEeCCC-EEEEEcCCCceecc
Q psy7108 261 PTGQAWVAATTEG-VHIYSLDSGYVFDP 287 (703)
Q Consensus 261 pdg~~l~s~s~Dg-v~iwd~~~~~~~~~ 287 (703)
|+|++|++++.|| |++|++.+++....
T Consensus 359 ~dg~~l~s~~~dg~i~iw~~~~~~~~~~ 386 (401)
T 4aez_A 359 PDGRILSTAASDENLKFWRVYDGDHVKR 386 (401)
T ss_dssp TTSSEEEEECTTSEEEEEECCC------
T ss_pred CCCCEEEEEeCCCcEEEEECCCCccccc
Confidence 9999999999999 99999998876543
No 90
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.93 E-value=1.6e-24 Score=224.80 Aligned_cols=236 Identities=13% Similarity=0.208 Sum_probs=197.9
Q ss_pred CccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeE
Q psy7108 36 RVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQL 115 (703)
Q Consensus 36 ~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I 115 (703)
++. +++.+|.+.|++++| | ++++|++|+.||.|++||+.++........|...|.+++|+|+++.+++++.|+.|
T Consensus 9 ~~~--~~l~~h~~~v~~~~~-~--~~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i 83 (313)
T 3odt_A 9 QLS--ATLKGHDQDVRDVVA-V--DDSKVASVSRDGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDTMI 83 (313)
T ss_dssp EEE--EEECCCSSCEEEEEE-E--ETTEEEEEETTSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTSCE
T ss_pred HHH--HHhhCCCCCcEEEEe-c--CCCEEEEEEcCCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCCeE
Confidence 455 789999999999999 8 89999999999999999998887777778899999999999999999999999999
Q ss_pred EEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108 116 IMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT 192 (703)
Q Consensus 116 ~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~ 192 (703)
++|++... +....+.+|. ..|.+++| +++.+++++.|+.|++|| .++....+.
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~--------------------~~i~~~~~--~~~~l~~~~~d~~i~~~d--~~~~~~~~~ 139 (313)
T 3odt_A 84 NGVPLFATSGEDPLYTLIGHQ--------------------GNVCSLSF--QDGVVISGSWDKTAKVWK--EGSLVYNLQ 139 (313)
T ss_dssp EEEETTCCTTSCC-CEECCCS--------------------SCEEEEEE--ETTEEEEEETTSEEEEEE--TTEEEEEEE
T ss_pred EEEEeeecCCCCcccchhhcc--------------------cCEEEEEe--cCCEEEEEeCCCCEEEEc--CCcEEEecc
Confidence 99998754 3444555544 48999999 578999999999999999 566666666
Q ss_pred eccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEEEEe
Q psy7108 193 ITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~s~s 270 (703)
.+. ..+.+++++| ++..+++++.++ .+++|| ..+....+.. |...+.+++|+|++. +++++
T Consensus 140 ~~~--------~~v~~~~~~~~~~~~l~~~~~d~------~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~-~~~~~ 202 (313)
T 3odt_A 140 AHN--------ASVWDAKVVSFSENKFLTASADK------TIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGH-FISCS 202 (313)
T ss_dssp CCS--------SCEEEEEEEETTTTEEEEEETTS------CEEEEE--TTEEEEEECSSCSSCEEEEEEEETTE-EEEEE
T ss_pred cCC--------CceeEEEEccCCCCEEEEEECCC------CEEEEe--cCceEEEEeccCcccEEEEEEcCCCe-EEEcc
Confidence 544 4889999988 888888877664 799999 4445555665 889999999999998 99999
Q ss_pred CCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 271 TEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 271 ~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
.|+ |++||+.+++....+ ..+++|+|++ . +++++.++.+.+ |++...
T Consensus 203 ~dg~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~-l~~~~~dg~v~i-wd~~~~ 256 (313)
T 3odt_A 203 NDGLIKLVDMHTGDVLRTYEGHESFVYCIKLLPNG--D-IVSCGEDRTVRI-WSKENG 256 (313)
T ss_dssp TTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTS--C-EEEEETTSEEEE-ECTTTC
T ss_pred CCCeEEEEECCchhhhhhhhcCCceEEEEEEecCC--C-EEEEecCCEEEE-EECCCC
Confidence 999 999999988876544 3679999998 3 778889999998 987654
No 91
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=6e-25 Score=240.41 Aligned_cols=242 Identities=12% Similarity=0.213 Sum_probs=198.0
Q ss_pred ccccCCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCC----------CceeEEEecCCCcEEEEEEecCCC-EEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVE----------TDTQHETIQLLSDALCVAYKPDGT-EIVV 108 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~----------~~~~~~~~~~~~~V~~v~~spdg~-~las 108 (703)
....+|.+.|++++|+| + +.+|++++.||.|++|++.+ ......+..|...|.+++|+|++. .|++
T Consensus 122 ~~~~~h~~~v~~l~~~p--~~~~~lat~~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~~~~~l~s 199 (430)
T 2xyi_A 122 EIKINHEGEVNRARYMP--QNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPNLNGYLLS 199 (430)
T ss_dssp EEEEEESSCCSEEEEET--TEEEEEEEECSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTTSTTEEEE
T ss_pred EEEEcCCCcEEEEEECC--CCCcEEEEECCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCCCCCeEEE
Confidence 45568999999999999 6 68999999999999999976 445667778999999999999998 9999
Q ss_pred EECCCeEEEEEcCCCcE-------EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEE
Q psy7108 109 ATLDGQLIMFDVESAAQ-------VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIY 180 (703)
Q Consensus 109 ~s~dg~I~vwd~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lw 180 (703)
|+.||.|++||+.++.. ...+.+ |...|.+++|+| ++..|++++.|+.|++|
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~--------------------h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~ 259 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTG--------------------HTAVVEDVAWHLLHESLFGSVADDQKLMIW 259 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECC--------------------CSSCEEEEEECSSCTTEEEEEETTSEEEEE
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecC--------------------CCCCEeeeEEeCCCCCEEEEEeCCCeEEEE
Confidence 99999999999987422 122323 445899999999 67899999999999999
Q ss_pred ECCCC---ceEEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCC-CccceeecCCccceE
Q psy7108 181 SSREG---ILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKK-GDMAARVLKPEVRVF 255 (703)
Q Consensus 181 D~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~~~~h~~~V~ 255 (703)
|++++ +.+..+.. +...|++++|+|+++. +++++.+ +.|++||+++ ++.+..+..|...|.
T Consensus 260 d~~~~~~~~~~~~~~~--------~~~~v~~i~~~p~~~~~l~tg~~d------g~v~vwd~~~~~~~~~~~~~h~~~v~ 325 (430)
T 2xyi_A 260 DTRNNNTSKPSHTVDA--------HTAEVNCLSFNPYSEFILATGSAD------KTVALWDLRNLKLKLHSFESHKDEIF 325 (430)
T ss_dssp ETTCSCSSSCSEEEEC--------CSSCEEEEEECSSCTTEEEEEETT------SEEEEEETTCTTSCSEEEECCSSCEE
T ss_pred ECCCCCCCcceeEeec--------CCCCeEEEEeCCCCCCEEEEEeCC------CeEEEEeCCCCCCCeEEeecCCCCEE
Confidence 99986 45555543 3458999999999985 5555554 3899999998 566778888999999
Q ss_pred EEEEcCCCC-EEEEEeCCC-EEEEEcCCC--------------cee------cceeeeEEEccchhhh-HhhcCCcceEE
Q psy7108 256 CVKFSPTGQ-AWVAATTEG-VHIYSLDSG--------------YVF------DPFLLDISITPQSVKE-ALADKDYAKAL 312 (703)
Q Consensus 256 ~l~~spdg~-~l~s~s~Dg-v~iwd~~~~--------------~~~------~~~~~~~~~spd~~~~-~l~sg~~~~~l 312 (703)
+++|+|+++ .|++++.|+ |+|||+... +.+ .....+++|+|++ . ++++++.++.+
T Consensus 326 ~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~~l~s~s~dg~i 403 (430)
T 2xyi_A 326 QVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNE--PWIICSVSEDNIM 403 (430)
T ss_dssp EEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSS--TTEEEEEETTSEE
T ss_pred EEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEEEECCCC--CCEEEEEECCCCE
Confidence 999999996 589999999 999999762 221 2234679999998 6 78889999999
Q ss_pred EEEEecCch
Q psy7108 313 MMSLKLNEQ 321 (703)
Q Consensus 313 ~la~~l~~~ 321 (703)
.+ |++...
T Consensus 404 ~i-w~~~~~ 411 (430)
T 2xyi_A 404 QV-WQMAEN 411 (430)
T ss_dssp EE-EEECHH
T ss_pred EE-eEcccc
Confidence 98 998754
No 92
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.93 E-value=2.4e-24 Score=224.08 Aligned_cols=256 Identities=12% Similarity=0.204 Sum_probs=203.5
Q ss_pred ceeec-cCCCccccccc--cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108 28 VKKGD-MAARVLKPEVL--SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l--~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~ 104 (703)
|++|| .+|+++ +++ .+|...|++++|+| ++++|++|+.||+|++||+++++.......|...+.++.+ ++.
T Consensus 47 V~iWd~~tg~~~--~~~~~~~~~~~V~~v~~~~--~~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~--~~~ 120 (318)
T 4ggc_A 47 VYLWSASSGDIL--QLLQMEQPGEYISSVAWIK--EGNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSW--NSY 120 (318)
T ss_dssp EEEEETTTCCEE--EEEECCSTTCCEEEEEECT--TSSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEE--ETT
T ss_pred EEEEECCCCCEE--EEEEecCCCCeEEEEEECC--CCCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeec--CCC
Confidence 56666 478887 655 57888999999999 9999999999999999999999888888889888876554 578
Q ss_pred EEEEEECCCeEEEEEcCCC-cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108 105 EIVVATLDGQLIMFDVESA-AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 105 ~las~s~dg~I~vwd~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~ 183 (703)
.+++++.++.+++|+..+. ..+..+.+|.. .+..++++++++++++++.|+.|++||++
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------------~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 180 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQ--------------------EVCGLRWAPDGRHLASGGNDNLVNVWPSA 180 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSS--------------------CEEEEEECTTSSEEEEEETTSCEEEEESS
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccC--------------------ceEEEEEcCCCCEEEEEecCcceeEEECC
Confidence 9999999999999999876 44556666654 89999999999999999999999999999
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG 263 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg 263 (703)
+++...... .....+...+..++++|++..++.....+.+ ..|++||......... ..+...+..+.|+|++
T Consensus 181 ~~~~~~~~~----~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~~i~lwd~~~~~~~~~-~~~~~~v~~~~~~~~~ 252 (318)
T 4ggc_A 181 PGEGGWVPL----QTFTQHQGAVKAVAWCPWQSNVLATGGGTSD---RHIRIWNVCSGACLSA-VDAHSQVCSILWSPHY 252 (318)
T ss_dssp CBTTBSCCS----EEECCCCSCEEEEEECTTSTTEEEEEECTTT---CEEEEEETTTCCEEEE-EECSSCEEEEEEETTT
T ss_pred CCcccccce----eeecccCCceEEEEecCCCCcEEEEEecCCC---CEEEEEeccccccccc-ccceeeeeeeeecccc
Confidence 865322111 0112234578899999988766543332212 4899999988765543 4466779999999999
Q ss_pred CEEEEEe--CCC-EEEEEcCCCceecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 264 QAWVAAT--TEG-VHIYSLDSGYVFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 264 ~~l~s~s--~Dg-v~iwd~~~~~~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
+.+++++ .|+ |++||+.+++.+..+ +.+++|+|++ .+|++++.|+.+++ |++.+
T Consensus 253 ~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg--~~l~S~s~D~~v~i-Wd~~~ 315 (318)
T 4ggc_A 253 KELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDG--ATVASAAADETLRL-WRCFE 315 (318)
T ss_dssp TEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTS--SCEEEEETTTEEEE-ECCSC
T ss_pred cceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCC--CEEEEEecCCeEEE-EECCC
Confidence 9987655 678 999999999876554 4679999999 88999999999999 98864
No 93
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.93 E-value=9e-25 Score=239.27 Aligned_cols=244 Identities=15% Similarity=0.319 Sum_probs=199.7
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|| .+++++ ..+.+|.+.|.+++| ++++|++|+.||+|++||+.+++.......|...|.+++|+ +..+
T Consensus 155 i~iwd~~~~~~~--~~~~~h~~~v~~l~~----~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~--~~~l 226 (435)
T 1p22_A 155 IKIWDKNTLECK--RILTGHTGSVLCLQY----DERVIITGSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFN--NGMM 226 (435)
T ss_dssp EEEEESSSCCEE--EEECCCSSCEEEEEC----CSSEEEEEETTSCEEEEESSSCCEEEEECCCCSCEEEEECC--TTEE
T ss_pred EEEEeCCCCeEE--EEEcCCCCcEEEEEE----CCCEEEEEcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEc--CCEE
Confidence 56666 477888 899999999999988 45899999999999999999998888888899999999997 4599
Q ss_pred EEEECCCeEEEEEcCCCcEE---EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108 107 VVATLDGQLIMFDVESAAQV---GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~ 183 (703)
++|+.||.|++||+++++.. ..+.+|. ..|.+++| +++++++|+.|+.|++||++
T Consensus 227 ~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~--------------------~~v~~~~~--~~~~l~s~~~dg~i~vwd~~ 284 (435)
T 1p22_A 227 VTCSKDRSIAVWDMASPTDITLRRVLVGHR--------------------AAVNVVDF--DDKYIVSASGDRTIKVWNTS 284 (435)
T ss_dssp EEEETTSCEEEEECSSSSCCEEEEEECCCS--------------------SCEEEEEE--ETTEEEEEETTSEEEEEETT
T ss_pred EEeeCCCcEEEEeCCCCCCceeeeEecCCC--------------------CcEEEEEe--CCCEEEEEeCCCeEEEEECC
Confidence 99999999999999887654 4444444 48999999 78999999999999999999
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG 263 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg 263 (703)
+++++..+..+.. .+.++.+ ++..+++++.++ .|++||+++++++..+.+|...|.+++| ++
T Consensus 285 ~~~~~~~~~~~~~--------~v~~~~~--~~~~l~~g~~dg------~i~iwd~~~~~~~~~~~~h~~~v~~~~~--~~ 346 (435)
T 1p22_A 285 TCEFVRTLNGHKR--------GIACLQY--RDRLVVSGSSDN------TIRLWDIECGACLRVLEGHEELVRCIRF--DN 346 (435)
T ss_dssp TCCEEEEEECCSS--------CEEEEEE--ETTEEEEEETTS------CEEEEETTTCCEEEEECCCSSCEEEEEC--CS
T ss_pred cCcEEEEEcCCCC--------cEEEEEe--CCCEEEEEeCCC------eEEEEECCCCCEEEEEeCCcCcEEEEEe--cC
Confidence 9999988875544 7778877 467888877664 8999999999999999999999999998 78
Q ss_pred CEEEEEeCCC-EEEEEcCCCc---------eecce------eeeEEEccchhhhHhhcCCcceEEEEEEecCchhHH
Q psy7108 264 QAWVAATTEG-VHIYSLDSGY---------VFDPF------LLDISITPQSVKEALADKDYAKALMMSLKLNEQGLI 324 (703)
Q Consensus 264 ~~l~s~s~Dg-v~iwd~~~~~---------~~~~~------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~~~ 324 (703)
+++++|+.|| |++||+.++. ....+ ..++++ ++ ..+++++.|+.+.+ |++......
T Consensus 347 ~~l~sg~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~--~~--~~l~s~s~Dg~i~i-wd~~~~~~~ 418 (435)
T 1p22_A 347 KRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQF--DE--FQIVSSSHDDTILI-WDFLNDPAA 418 (435)
T ss_dssp SEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEE--CS--SCEEECCSSSEEEE-EC-------
T ss_pred CEEEEEeCCCcEEEEECCCCCCccccccchheeeccCCCCCeEEEEe--CC--CEEEEEeCCCEEEE-EECCCCCCc
Confidence 8999999999 9999986654 22222 345666 55 67899999999999 998765433
No 94
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=2.2e-24 Score=237.77 Aligned_cols=243 Identities=12% Similarity=0.210 Sum_probs=199.8
Q ss_pred ccccCCCcCe-EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108 41 EVLSGHEGPV-SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD 119 (703)
Q Consensus 41 ~~l~gH~~~V-~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd 119 (703)
..+.+|.+.| .++.+ ++++|++|+.||+|++||+.+++....+..|.+.|.+++|+|++ .+++|+.||+|++||
T Consensus 115 ~~l~~h~~~v~~~~~~----~~~~l~sgs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~~-~l~s~s~dg~i~vwd 189 (464)
T 3v7d_B 115 TTLRGHMTSVITCLQF----EDNYVITGADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGG-ILVSGSTDRTVRVWD 189 (464)
T ss_dssp EEEECCSSSCEEEEEE----ETTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSTT-EEEEEETTSCEEEEE
T ss_pred EEEcCCCCCcEEEEEE----CCCEEEEEcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCCC-EEEEEeCCCCEEEEE
Confidence 6789998885 66555 45799999999999999999998778888899999999999988 999999999999999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc--CCCCEEEEEecCCcEEEEECCCCceEEEEEecc--
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS--ADGSCILAAGQSKYICIYSSREGILLKKFTITQ-- 195 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s--pdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~-- 195 (703)
+++++.+..+.+|.. .|.+++|+ ++++++++++.|+.|++||++++..........
T Consensus 190 ~~~~~~~~~~~~h~~--------------------~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~ 249 (464)
T 3v7d_B 190 IKKGCCTHVFEGHNS--------------------TVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDY 249 (464)
T ss_dssp TTTTEEEEEECCCSS--------------------CEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCS
T ss_pred CCCCcEEEEECCCCC--------------------ccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCc
Confidence 999999988887765 89999998 578999999999999999999876433211110
Q ss_pred -------------CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108 196 -------------NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 196 -------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd 262 (703)
.....++...+.+ ++++++.+++++.++ .|++||+++++.+..+.+|...|.+++|+|+
T Consensus 250 ~~~~~~~~~~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~------~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~ 321 (464)
T 3v7d_B 250 PLVFHTPEENPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDN------TLIVWDVAQMKCLYILSGHTDRIYSTIYDHE 321 (464)
T ss_dssp SEEESCGGGCTTEEEEECCCSSCEEE--EEEETTEEEEEETTS------CEEEEETTTTEEEEEECCCSSCEEEEEEETT
T ss_pred ceEeeccCCCeEEEEEccCccceEEE--EcCCCCEEEEEeCCC------eEEEEECCCCcEEEEecCCCCCEEEEEEcCC
Confidence 0012234445554 478899998888764 8999999999999999999999999999999
Q ss_pred CCEEEEEeCCC-EEEEEcCCCceeccee------eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 263 GQAWVAATTEG-VHIYSLDSGYVFDPFL------LDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
++.+++++.|+ |++||+.+++....+. ..+.+++ ..+++++.++.+++ |++...
T Consensus 322 ~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~----~~l~s~s~dg~v~v-wd~~~~ 382 (464)
T 3v7d_B 322 RKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSD----KFLVSAAADGSIRG-WDANDY 382 (464)
T ss_dssp TTEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECS----SEEEEEETTSEEEE-EETTTC
T ss_pred CCEEEEEeCCCcEEEEECCCCcEEEEEeCCCCcEEEEEEcC----CEEEEEeCCCcEEE-EECCCC
Confidence 99999999999 9999999988765543 4566663 57889999999998 988753
No 95
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.93 E-value=3e-24 Score=235.72 Aligned_cols=231 Identities=19% Similarity=0.368 Sum_probs=158.1
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
..+.+|...|.+++|++ +.+++|+.||+|++||+.+++.......|...|.+++| +++.+++++.|+.|++||+
T Consensus 193 ~~~~~h~~~v~~~~~~~----~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~--~~~~l~~~~~dg~i~iwd~ 266 (445)
T 2ovr_B 193 HTLYGHTSTVRCMHLHE----KRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQY--DGRRVVSGAYDFMVKVWDP 266 (445)
T ss_dssp EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEE--CSSCEEEEETTSCEEEEEG
T ss_pred EEECCCCCcEEEEEecC----CEEEEEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEE--CCCEEEEEcCCCEEEEEEC
Confidence 44444444444444432 33444444444444444444443444444444444444 3444444444444444444
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
++++.+..+.+ |...|.+++| +++.+++++.|+.|++||+++++++..+..+..
T Consensus 267 ~~~~~~~~~~~--------------------~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~---- 320 (445)
T 2ovr_B 267 ETETCLHTLQG--------------------HTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQS---- 320 (445)
T ss_dssp GGTEEEEEECC--------------------CSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCS----
T ss_pred CCCcEeEEecC--------------------CCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEcCCcc----
Confidence 44444444443 4458999999 789999999999999999999998888765443
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC---CccceEEEEEcCCCCEEEEEeCCC-EEE
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK---PEVRVFCVKFSPTGQAWVAATTEG-VHI 276 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~---h~~~V~~l~~spdg~~l~s~s~Dg-v~i 276 (703)
.+.++.+ +++.+++++.++ .|++||+++++....+.. |...|.+++|+ ++++++++.|| |++
T Consensus 321 ----~v~~~~~--~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~~~l~s~~~dg~v~i 386 (445)
T 2ovr_B 321 ----LTSGMEL--KDNILVSGNADS------TVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--KNFVITSSDDGTVKL 386 (445)
T ss_dssp ----CEEEEEE--ETTEEEEEETTS------CEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--SSEEEEEETTSEEEE
T ss_pred ----cEEEEEE--eCCEEEEEeCCC------eEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--CCEEEEEeCCCeEEE
Confidence 5555555 567888777654 899999999988888776 88899999996 57999999999 999
Q ss_pred EEcCCCceecce-----------eeeEEEccchhhhHhhcCCcceE----EEEEEecCc
Q psy7108 277 YSLDSGYVFDPF-----------LLDISITPQSVKEALADKDYAKA----LMMSLKLNE 320 (703)
Q Consensus 277 wd~~~~~~~~~~-----------~~~~~~spd~~~~~l~sg~~~~~----l~la~~l~~ 320 (703)
||+.+++....+ ..+++|+|++ ..+++++.++. +.+ |+++.
T Consensus 387 wd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~la~~~~dg~~~~~l~v-~df~~ 442 (445)
T 2ovr_B 387 WDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK--LVCAVGSRNGTEETKLLV-LDFDV 442 (445)
T ss_dssp EETTTCCEEEEEEECTTGGGTCEEEEEEECSSE--EEEEEECSSSSSCCEEEE-EECCC
T ss_pred EECCCCceeeeeeccccCCCCceEEEEEecCCE--EEEEEcccCCCCccEEEE-EECCC
Confidence 999998876554 4679999999 78888888886 665 76653
No 96
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.3e-25 Score=248.73 Aligned_cols=248 Identities=7% Similarity=0.090 Sum_probs=183.3
Q ss_pred cccCCCcCeEEEEEcCCCCC---------CEEEE-------------------EeCCCcEEEEEcCCCcee----EEEec
Q psy7108 42 VLSGHEGPVSCIEFSPVLSS---------TGMVS-------------------ASWDKTVKLWNAVETDTQ----HETIQ 89 (703)
Q Consensus 42 ~l~gH~~~V~~l~~sp~~dg---------~~L~s-------------------gs~Dg~V~iWd~~~~~~~----~~~~~ 89 (703)
++. +.+.|.+++|+| ++ ++||+ ++.|++|+||++.+++.. ..+..
T Consensus 129 ~~~-~~~~V~sv~w~p--~~~~~~~~~~~~~LAv~~~~~~~~~~~~~~~~laS~s~D~tI~iWd~~~~~~~~~~~~~l~~ 205 (524)
T 2j04_B 129 IYN-VGGLVTDIAWLN--IEENTDIGKDIQYLAVAVSQYMDEPLNEHLEMFDKEKHSSCIQIFKMNTSTLHCVKVQTIVH 205 (524)
T ss_dssp EEE-CCC--CCCSCEE--ECCCCSSCSSEEEEEEEEEC------------------CEEEEEEEEETTTCCEEEEEEEEE
T ss_pred EEE-CCCceeEEEecc--cCCCCccCcCCeEEEEEEecccCCccchhhhhhccCCCCceEEEEEccCCCCCceEEEEEEe
Confidence 444 678899999998 65 55655 557899999999776532 22345
Q ss_pred CCCcEEEEEEecC------CCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108 90 LLSDALCVAYKPD------GTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA 163 (703)
Q Consensus 90 ~~~~V~~v~~spd------g~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp 163 (703)
|.+.|.+++|+|+ +.+||+++.||+|++||+.+++.......+. .........|...|++++|+|
T Consensus 206 ~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~---------~~p~~~l~~h~~~v~sv~~s~ 276 (524)
T 2j04_B 206 SFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMC---------EKPSLTLSLADSLITTFDFLS 276 (524)
T ss_dssp CCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECC---------CSCSEEECCTTTCEEEEEESS
T ss_pred cCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceee---------cCceEEEEcCCCCEEEEEecC
Confidence 6789999999997 5799999999999999998764210000000 000011233556899999998
Q ss_pred CCCEEEEEecCCcEEEEECCCCc-eEEEEEeccCCccccccccceee--eeccCC-CEEEEEcccCCCCCeeEEECCCCC
Q psy7108 164 DGSCILAAGQSKYICIYSSREGI-LLKKFTITQNKSLDGINDFINRR--KMTEFG-NVSLIETRETHEGGNVVLKLPGVK 239 (703)
Q Consensus 164 dg~~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~--~~spdg-~~l~~~~~~~~~~~~~~i~iwd~~ 239 (703)
++ .|++|+.||+|++||++++. +...+.. |...|.++ +++|+| ..+++++.++ +|++||++
T Consensus 277 ~~-~lasgs~DgtV~lWD~~~~~~~~~~~~~--------H~~~V~sv~~~~s~~g~~~laS~S~D~------tvklWD~~ 341 (524)
T 2j04_B 277 PT-TVVCGFKNGFVAEFDLTDPEVPSFYDQV--------HDSYILSVSTAYSDFEDTVVSTVAVDG------YFYIFNPK 341 (524)
T ss_dssp SS-EEEEEETTSEEEEEETTBCSSCSEEEEC--------SSSCEEEEEEECCTTSCCEEEEEETTS------EEEEECGG
T ss_pred CC-eEEEEeCCCEEEEEECCCCCCceEEeec--------ccccEEEEEEEcCCCCCeEEEEeccCC------eEEEEECC
Confidence 64 89999999999999999763 3344444 44589998 578888 7777777664 99999999
Q ss_pred CCccceeecCCcc--ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec------ceeeeEEEccchhhhHhhcCCcce
Q psy7108 240 KGDMAARVLKPEV--RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD------PFLLDISITPQSVKEALADKDYAK 310 (703)
Q Consensus 240 ~~~~~~~~~~h~~--~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~------~~~~~~~~spd~~~~~l~sg~~~~ 310 (703)
++++...+.+|.. .|.+++|+|+++.+++++.|+ |++||+.++.+.. ..+.+++|+|++ ..+++++.|+
T Consensus 342 ~~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g--~~l~Sgs~Dg 419 (524)
T 2j04_B 342 DIATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLH--PMVLAGSADG 419 (524)
T ss_dssp GHHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSC--CBCEEEETTT
T ss_pred CCCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCC--CeEEEEECCC
Confidence 9887766666543 588999999999999999999 9999998876533 235789999999 7899999999
Q ss_pred EEEEEEecC
Q psy7108 311 ALMMSLKLN 319 (703)
Q Consensus 311 ~l~la~~l~ 319 (703)
++++ |++.
T Consensus 420 tv~l-wd~~ 427 (524)
T 2j04_B 420 SLII-TNAA 427 (524)
T ss_dssp EEEC-CBSC
T ss_pred EEEE-Eech
Confidence 9998 8764
No 97
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.93 E-value=1.2e-23 Score=226.66 Aligned_cols=216 Identities=15% Similarity=0.167 Sum_probs=173.0
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCC---CEEEEEECCCeEEEEEcC
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDG---TEIVVATLDGQLIMFDVE 121 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg---~~las~s~dg~I~vwd~~ 121 (703)
+|...|.+++|+|. ++.+|++++.||.|++||+.+++ ......+...+.+++|+|.+ ..+++++.|+.|++||++
T Consensus 97 ~~~~~v~~~~~~~~-~~~~l~s~~~d~~i~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~ 174 (408)
T 4a11_B 97 VHRYSVETVQWYPH-DTGMFTSSSFDKTLKVWDTNTLQ-TADVFNFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLK 174 (408)
T ss_dssp CCSSCEEEEEECTT-CTTCEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESS
T ss_pred cCCCcEEEEEEccC-CCcEEEEEeCCCeEEEeeCCCCc-cceeccCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCC
Confidence 69999999999994 56799999999999999998875 44455688899999999854 499999999999999999
Q ss_pred CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCc-eEEEEEeccC---
Q psy7108 122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGI-LLKKFTITQN--- 196 (703)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~-~~~~~~~~~~--- 196 (703)
+++.+..+..|.. .|.+++|+|+++ .+++++.|+.|++||++++. +...+..+..
T Consensus 175 ~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~ 234 (408)
T 4a11_B 175 SGSCSHILQGHRQ--------------------EILAVSWSPRYDYILATASADSRVKLWDVRRASGCLITLDQHNGKKS 234 (408)
T ss_dssp SSCCCEEECCCCS--------------------CEEEEEECSSCTTEEEEEETTSCEEEEETTCSSCCSEECCTTTTCSC
T ss_pred CcceeeeecCCCC--------------------cEEEEEECCCCCcEEEEEcCCCcEEEEECCCCCcccccccccccccc
Confidence 9988888877654 899999999998 58899999999999998865 4444432211
Q ss_pred ----CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---------------------------------
Q psy7108 197 ----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--------------------------------- 239 (703)
Q Consensus 197 ----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--------------------------------- 239 (703)
....++...|.+++|+|+++.+++++.++ .+++||+.
T Consensus 235 ~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (408)
T 4a11_B 235 QAVESANTAHNGKVNGLCFTSDGLHLLTVGTDN------RMRLWNSSNGENTLVNYGKVCNNSKKGLKFTVSCGCSSEFV 308 (408)
T ss_dssp CCTTTSSCSCSSCEEEEEECTTSSEEEEEETTS------CEEEEETTTCCBCCCCCCCCCCCCSSCCCCEECCSSSSCEE
T ss_pred eeeccccccccCceeEEEEcCCCCEEEEecCCC------eEEEEECCCCccceeccccccccccccceeEEecCCCceEE
Confidence 12245677899999999999999887764 45566554
Q ss_pred --------------CCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108 240 --------------KGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF 288 (703)
Q Consensus 240 --------------~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~ 288 (703)
+++.+..+.+|...|.+++|+|++++|++++.|| |++|++.+++.....
T Consensus 309 ~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~i~iw~~~~~~~~~~~ 372 (408)
T 4a11_B 309 FVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRDCNILAWVPSLYEPVPDD 372 (408)
T ss_dssp EEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEEECC-------
T ss_pred EEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCCCeEEEEeCCCCCccCCC
Confidence 4445556677999999999999999999999999 999999988775543
No 98
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.93 E-value=5e-24 Score=234.45 Aligned_cols=225 Identities=11% Similarity=0.078 Sum_probs=181.7
Q ss_pred CCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcC--CCceeEEEe--cCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108 45 GHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAV--ETDTQHETI--QLLSDALCVAYKPDGTEIVVATLDGQLIMFD 119 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~--~~~~~~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~vwd 119 (703)
+|.+.|++++|+| ++++| ++|+.||+|++||+. +++....+. .+...|.+++|+|++++|++++.|+.|++|+
T Consensus 100 ~~~~~v~~~~~s~--d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~ 177 (450)
T 2vdu_B 100 PIYSYIRNLRLTS--DESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAEDDTTVIIADKFGDVYSID 177 (450)
T ss_dssp CCCCCEEEEEECT--TSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred ccCCceEEEEEcC--CCCEEEEEECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCCCCEEEEEeCCCcEEEEe
Confidence 4556899999999 99996 899999999999998 666555554 5778999999999999999999999999999
Q ss_pred cCCCcEEE----EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCcEEEEECCCCceEEEEE
Q psy7108 120 VESAAQVG----SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKYICIYSSREGILLKKFT 192 (703)
Q Consensus 120 ~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~I~lwD~~~~~~~~~~~ 192 (703)
+.+++... .+.+| ...|++++|+|+ +++|++++.|+.|++||+++++++..+.
T Consensus 178 ~~~~~~~~~~~~~~~~h--------------------~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~ 237 (450)
T 2vdu_B 178 INSIPEEKFTQEPILGH--------------------VSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWL 237 (450)
T ss_dssp TTSCCCSSCCCCCSEEC--------------------SSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEEC
T ss_pred cCCcccccccceeeecc--------------------cCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeee
Confidence 98776432 33333 448999999999 9999999999999999999988877642
Q ss_pred eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-----------------------
Q psy7108 193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK----------------------- 249 (703)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~----------------------- 249 (703)
.+|...|.+++|+ +++++++++.++ .|++||+++++++..+..
T Consensus 238 -------~~h~~~v~~~~~s-d~~~l~s~~~d~------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (450)
T 2vdu_B 238 -------FGHKHFVSSICCG-KDYLLLSAGGDD------KIFAWDWKTGKNLSTFDYNSLIKPYLNDQHLAPPRFQNENN 303 (450)
T ss_dssp -------CCCSSCEEEEEEC-STTEEEEEESSS------EEEEEETTTCCEEEEEECHHHHGGGCCTTSBC---------
T ss_pred -------cCCCCceEEEEEC-CCCEEEEEeCCC------eEEEEECCCCcEeeeecchhhhhhhhhhccccccccccccc
Confidence 2345589999999 999999887653 899999999987766652
Q ss_pred --CccceEEEEEcCCCCEEEEEe-CCC-EEEEEc--CCC---ceecc-----eeeeEEEccchhhhHhhcCC
Q psy7108 250 --PEVRVFCVKFSPTGQAWVAAT-TEG-VHIYSL--DSG---YVFDP-----FLLDISITPQSVKEALADKD 307 (703)
Q Consensus 250 --h~~~V~~l~~spdg~~l~s~s-~Dg-v~iwd~--~~~---~~~~~-----~~~~~~~spd~~~~~l~sg~ 307 (703)
....|.+++|+|+++++++++ .++ |++|++ .++ ..... ...+++|+|++ .+++.++
T Consensus 304 ~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~~~~~~~v~~~~~~~~~--~~v~~~~ 373 (450)
T 2vdu_B 304 DIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQIITFPYNVISLSAHNDE--FQVTLDN 373 (450)
T ss_dssp -CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEEEECSSCEEEEEEETTE--EEEEECC
T ss_pred ccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccEeccCCceEEEEecCCc--EEEEEec
Confidence 235689999999999999998 788 999999 555 33322 23678999976 4444444
No 99
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.93 E-value=1.7e-24 Score=227.92 Aligned_cols=238 Identities=9% Similarity=0.048 Sum_probs=188.0
Q ss_pred ceeecc-CCC---ccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEc-CCCceeEEEec--CCCcEEEEEE
Q psy7108 28 VKKGDM-AAR---VLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNA-VETDTQHETIQ--LLSDALCVAY 99 (703)
Q Consensus 28 v~~~d~-tg~---~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~-~~~~~~~~~~~--~~~~V~~v~~ 99 (703)
+++|+. +++ .. ..+.+|...|++++|+| +++ +|++|+.||.|++||+ .++ ....+.. |...|.+++|
T Consensus 35 v~iw~~~~~~~~~~~--~~~~~~~~~v~~~~~~~--~~~~~l~~~~~dg~i~~wd~~~~~-~~~~~~~~~~~~~v~~l~~ 109 (342)
T 1yfq_A 35 LTVYKFDIQAKNVDL--LQSLRYKHPLLCCNFID--NTDLQIYVGTVQGEILKVDLIGSP-SFQALTNNEANLGICRICK 109 (342)
T ss_dssp EEEEEEETTTTEEEE--EEEEECSSCEEEEEEEE--SSSEEEEEEETTSCEEEECSSSSS-SEEECBSCCCCSCEEEEEE
T ss_pred EEEEEeCCCCccccc--eeeeecCCceEEEEECC--CCCcEEEEEcCCCeEEEEEeccCC-ceEeccccCCCCceEEEEe
Confidence 555663 333 14 56679999999999999 999 9999999999999999 776 4466677 9999999999
Q ss_pred ecCCCEEEEEECCCeEEEEEcCC---------CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108 100 KPDGTEIVVATLDGQLIMFDVES---------AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA 170 (703)
Q Consensus 100 spdg~~las~s~dg~I~vwd~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s 170 (703)
+| ++.+++++.|+.|++||+++ ++.+..+. +...|.+++|+|++ +++
T Consensus 110 ~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~---------------------~~~~v~~~~~~~~~--l~~ 165 (342)
T 1yfq_A 110 YG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTK---------------------VKNKIFTMDTNSSR--LIV 165 (342)
T ss_dssp ET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSS---------------------SCCCEEEEEECSSE--EEE
T ss_pred CC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEe---------------------eCCceEEEEecCCc--EEE
Confidence 99 99999999999999999875 33222221 34589999999987 999
Q ss_pred EecCCcEEEEECCC-CceE-EEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCC------
Q psy7108 171 AGQSKYICIYSSRE-GILL-KKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKG------ 241 (703)
Q Consensus 171 ~s~dg~I~lwD~~~-~~~~-~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~------ 241 (703)
++.|+.|++||+++ +... .... ..+...+.+++|+| +++.+++++.++ .+++|+++..
T Consensus 166 ~~~d~~i~i~d~~~~~~~~~~~~~-------~~~~~~i~~i~~~~~~~~~l~~~~~dg------~i~i~~~~~~~~~~~~ 232 (342)
T 1yfq_A 166 GMNNSQVQWFRLPLCEDDNGTIEE-------SGLKYQIRDVALLPKEQEGYACSSIDG------RVAVEFFDDQGDDYNS 232 (342)
T ss_dssp EESTTEEEEEESSCCTTCCCEEEE-------CSCSSCEEEEEECSGGGCEEEEEETTS------EEEEEECCTTCCSTTC
T ss_pred EeCCCeEEEEECCccccccceeee-------cCCCCceeEEEECCCCCCEEEEEecCC------cEEEEEEcCCCccccc
Confidence 99999999999998 5432 2221 12344789999999 999999888764 8999988876
Q ss_pred ccceeecCCcc---------ceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------eeEEEccchhhhHhh
Q psy7108 242 DMAARVLKPEV---------RVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------LDISITPQSVKEALA 304 (703)
Q Consensus 242 ~~~~~~~~h~~---------~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------~~~~~spd~~~~~l~ 304 (703)
+....+..|.. .|.+++|+|++++|++++.|| |++||+.+++....+. .+++ |++ ..++
T Consensus 233 ~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~h~~~v~~~~--~~~--~~l~ 308 (342)
T 1yfq_A 233 SKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAKFNEDSVVKIA--CSD--NILC 308 (342)
T ss_dssp TTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSSEEEEEE--ECS--SEEE
T ss_pred ccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhcccCCCceEec--CCC--CeEE
Confidence 66777777755 899999999999999999999 9999999887644332 3344 777 5666
Q ss_pred cCCcceE
Q psy7108 305 DKDYAKA 311 (703)
Q Consensus 305 sg~~~~~ 311 (703)
+++.|+.
T Consensus 309 s~s~Dg~ 315 (342)
T 1yfq_A 309 LATSDDT 315 (342)
T ss_dssp EEEECTH
T ss_pred EEecCCc
Confidence 6666654
No 100
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.3e-25 Score=232.50 Aligned_cols=255 Identities=11% Similarity=0.064 Sum_probs=188.6
Q ss_pred ecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC---------CCcee
Q psy7108 14 ETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV---------ETDTQ 84 (703)
Q Consensus 14 ~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~---------~~~~~ 84 (703)
+...+.+..+++|++. +++++ ..+. ...|.++.|+| + +++++.|++|++|+.. ++...
T Consensus 51 l~sg~~Dg~v~iwd~~----~~~~~--~~~~--~~~v~~~~~~~--~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~ 117 (343)
T 3lrv_A 51 CMCRCEDGALHFTQLK----DSKTI--TTIT--TPNPRTGGEHP--A---IISRGPCNRLLLLYPGNQITILDSKTNKVL 117 (343)
T ss_dssp EEEEEETTEEEEEEES----SSSCE--EEEE--EECCCTTCCCC--S---EEEECSTTEEEEEETTTEEEEEETTTCCEE
T ss_pred EEEECCCCcEEEEECC----CCcEE--EEEe--cCCceeeeeCC--c---eEEecCCCeEEEEEccCceEEeecCCccee
Confidence 3444555666666654 67777 6665 57888999999 6 9999999999999765 33323
Q ss_pred EEEe-cCCCcEEEEEEec--CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108 85 HETI-QLLSDALCVAYKP--DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY 161 (703)
Q Consensus 85 ~~~~-~~~~~V~~v~~sp--dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~ 161 (703)
.... .|.+.|.+++|+| +++++++++.||+|++||+++++.......+. ...+.+++|
T Consensus 118 ~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~-------------------~~~i~~~~~ 178 (343)
T 3lrv_A 118 REIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKS-------------------DVEYSSGVL 178 (343)
T ss_dssp EEEECCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCS-------------------SCCCCEEEE
T ss_pred EEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCC-------------------CCceEEEEE
Confidence 3332 4668899999999 99999999999999999999998866654432 236899999
Q ss_pred cCCCCEEEEEecCCcEEEEECCCCceE-EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108 162 SADGSCILAAGQSKYICIYSSREGILL-KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK 240 (703)
Q Consensus 162 spdg~~l~s~s~dg~I~lwD~~~~~~~-~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~ 240 (703)
+|++++|++|+.|+.|++||+++++.. ..+.. +|...|.+++|+|+|.++++++.+ .|++||+++
T Consensus 179 ~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~-------~h~~~v~~l~fs~~g~~l~s~~~~-------~v~iwd~~~ 244 (343)
T 3lrv_A 179 HKDSLLLALYSPDGILDVYNLSSPDQASSRFPV-------DEEAKIKEVKFADNGYWMVVECDQ-------TVVCFDLRK 244 (343)
T ss_dssp CTTSCEEEEECTTSCEEEEESSCTTSCCEECCC-------CTTSCEEEEEECTTSSEEEEEESS-------BEEEEETTS
T ss_pred CCCCCEEEEEcCCCEEEEEECCCCCCCccEEec-------cCCCCEEEEEEeCCCCEEEEEeCC-------eEEEEEcCC
Confidence 999999999999999999999998876 55543 145599999999999999887732 699999999
Q ss_pred CccceeecC---CccceE--EEEEcCCCCEEEEEeC-CC-EEEEEcCCCcee-c-ceeeeEEEcc---chhhhHhhcCCc
Q psy7108 241 GDMAARVLK---PEVRVF--CVKFSPTGQAWVAATT-EG-VHIYSLDSGYVF-D-PFLLDISITP---QSVKEALADKDY 308 (703)
Q Consensus 241 ~~~~~~~~~---h~~~V~--~l~~spdg~~l~s~s~-Dg-v~iwd~~~~~~~-~-~~~~~~~~sp---d~~~~~l~sg~~ 308 (703)
++....+.. |...+. +++|+|+|++|++++. |+ +++|++.+.... . .....+.|++ +. ..+..++.
T Consensus 245 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~l~~~~~ 322 (343)
T 3lrv_A 245 DVGTLAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKTKNWTKDEESALCLQSDTADF--TDMDVVCG 322 (343)
T ss_dssp STTCBSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTTCSEEEEEEEECCC----CCC--CEEEEEEE
T ss_pred CCcceeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccccceEecCceeEecCcccccc--ceeEEEec
Confidence 877655443 434444 6999999999999988 88 999998665431 1 1123456666 44 45666666
Q ss_pred ceEEEEEE
Q psy7108 309 AKALMMSL 316 (703)
Q Consensus 309 ~~~l~la~ 316 (703)
++.+.+.+
T Consensus 323 d~~~~~~~ 330 (343)
T 3lrv_A 323 DGGIAAIL 330 (343)
T ss_dssp TTEEEEEE
T ss_pred CCceEEEE
Confidence 66666633
No 101
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.93 E-value=2.7e-24 Score=235.17 Aligned_cols=210 Identities=14% Similarity=0.191 Sum_probs=173.2
Q ss_pred CCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCce-------eEEEecCCCcEEEEEEec-CCCE
Q psy7108 35 ARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDT-------QHETIQLLSDALCVAYKP-DGTE 105 (703)
Q Consensus 35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~-------~~~~~~~~~~V~~v~~sp-dg~~ 105 (703)
.+.+ ..+.+|.+.|++++|+| ++. +|++|+.||+|++|++.++.. ......|...|.+++|+| ++..
T Consensus 171 ~~~~--~~~~~h~~~v~~l~~~~--~~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~ 246 (430)
T 2xyi_A 171 CQPD--LRLRGHQKEGYGLSWNP--NLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESL 246 (430)
T ss_dssp CCCS--EEEECCSSCCCCEEECT--TSTTEEEEECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTE
T ss_pred CCCc--EEecCCCCCeEEEEeCC--CCCCeEEEEeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCE
Confidence 3555 78899999999999999 777 999999999999999987432 234456889999999999 6789
Q ss_pred EEEEECCCeEEEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEE
Q psy7108 106 IVVATLDGQLIMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYS 181 (703)
Q Consensus 106 las~s~dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD 181 (703)
|++++.|+.|++||++++ +.+..+..|. ..|++++|+|++. .+++|+.|+.|++||
T Consensus 247 l~s~~~dg~i~i~d~~~~~~~~~~~~~~~~~--------------------~~v~~i~~~p~~~~~l~tg~~dg~v~vwd 306 (430)
T 2xyi_A 247 FGSVADDQKLMIWDTRNNNTSKPSHTVDAHT--------------------AEVNCLSFNPYSEFILATGSADKTVALWD 306 (430)
T ss_dssp EEEEETTSEEEEEETTCSCSSSCSEEEECCS--------------------SCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred EEEEeCCCeEEEEECCCCCCCcceeEeecCC--------------------CCeEEEEeCCCCCCEEEEEeCCCeEEEEe
Confidence 999999999999999977 4555555554 3899999999987 688999999999999
Q ss_pred CCC-CceEEEEEeccCCccccccccceeeeeccCCCE-EEEEcccCCCCCeeEEECCCCCC--------------Cccce
Q psy7108 182 SRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNV-SLIETRETHEGGNVVLKLPGVKK--------------GDMAA 245 (703)
Q Consensus 182 ~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~-l~~~~~~~~~~~~~~i~iwd~~~--------------~~~~~ 245 (703)
+++ ..++..+..+. ..|.+++|+|+++. +++++.+ +.|++||+.. .+.+.
T Consensus 307 ~~~~~~~~~~~~~h~--------~~v~~i~~sp~~~~~l~s~~~d------~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 372 (430)
T 2xyi_A 307 LRNLKLKLHSFESHK--------DEIFQVQWSPHNETILASSGTD------RRLHVWDLSKIGEEQSTEDAEDGPPELLF 372 (430)
T ss_dssp TTCTTSCSEEEECCS--------SCEEEEEECSSCTTEEEEEETT------SCCEEEEGGGTTCCCCHHHHHHCCTTEEE
T ss_pred CCCCCCCeEEeecCC--------CCEEEEEECCCCCCEEEEEeCC------CcEEEEeCCCCccccCccccccCCcceEE
Confidence 998 55666666443 48999999999975 5555444 3799999987 24555
Q ss_pred eecCCccceEEEEEcCCCC-EEEEEeCCC-EEEEEcCCC
Q psy7108 246 RVLKPEVRVFCVKFSPTGQ-AWVAATTEG-VHIYSLDSG 282 (703)
Q Consensus 246 ~~~~h~~~V~~l~~spdg~-~l~s~s~Dg-v~iwd~~~~ 282 (703)
...+|...|.+++|+|+++ .+++++.|+ |+||++...
T Consensus 373 ~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~~ 411 (430)
T 2xyi_A 373 IHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAEN 411 (430)
T ss_dssp ECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECHH
T ss_pred EcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEcccc
Confidence 6668899999999999999 889999999 999998754
No 102
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.93 E-value=2e-24 Score=222.42 Aligned_cols=201 Identities=9% Similarity=0.131 Sum_probs=148.8
Q ss_pred CeEEEEEcCCCC----CCEEEEEeC--------------------CCcEEEEEcC-CCceeEEEecCCCcEEEEEEec--
Q psy7108 49 PVSCIEFSPVLS----STGMVSASW--------------------DKTVKLWNAV-ETDTQHETIQLLSDALCVAYKP-- 101 (703)
Q Consensus 49 ~V~~l~~sp~~d----g~~L~sgs~--------------------Dg~V~iWd~~-~~~~~~~~~~~~~~V~~v~~sp-- 101 (703)
.|++++++| + ++.+++++. |+.|++|++. +++.......|...+..++|+|
T Consensus 113 ~v~sla~sp--d~~~~~~~l~s~g~~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 113 EIRALFCSS--DDESEKQVLLKSGNIKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQ 190 (356)
T ss_dssp EEEEECC--------CCEEEEEEEEEEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEE
T ss_pred ceEEEEECC--CccccccEEEeCCCeEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccC
Confidence 455666666 7 777777653 8888999984 4555566667888888999998
Q ss_pred -CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE------------
Q psy7108 102 -DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI------------ 168 (703)
Q Consensus 102 -dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l------------ 168 (703)
++..|++++.|++|++||+++++.+.++.++.. +...+.+++|+|+|+.+
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~-----------------~v~~v~~vafSpdG~~lvs~s~~~~~w~l 253 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS-----------------YQASVCHKAYSEMGLLFIVLSHPCAKESE 253 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTTCCEEEEEECCC--------------------CCCEEEEEEETTEEEEEEC--------
T ss_pred CCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc-----------------ceeeeEEEEECCCCCEEEEeccCCCccee
Confidence 779999999999999999999999999986542 11257788999999876
Q ss_pred EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108 169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL 248 (703)
Q Consensus 169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~ 248 (703)
++|+.|++|++||..+++.+..+.... .+++...+.+. +.++..+++++.++ +|++||+.+++++..+.
T Consensus 254 aSGs~D~tIklWd~~tgk~l~v~~~~~---p~Gh~~~~lsg--~~sg~~lASgS~Dg------TIkIWDl~tGk~l~tL~ 322 (356)
T 2w18_A 254 SLRSPVFQLIVINPKTTLSVGVMLYCL---PPGQAGRFLEG--DVKDHCAAAILTSG------TIAIWDLLLGQCTALLP 322 (356)
T ss_dssp ----CCEEEEEEETTTTEEEEEEEECC---CTTCCCCEEEE--EEETTEEEEEETTS------CEEEEETTTCSEEEEEC
T ss_pred eccCCCcEEEEEECCCCEEEEEEEeec---cCCCcceeEcc--ccCCCEEEEEcCCC------cEEEEECCCCcEEEEec
Confidence 567789999999999998877654221 12332233222 33366667666553 89999999999999999
Q ss_pred CCccceE-EEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108 249 KPEVRVF-CVKFSPTGQAWVAATTEG-VHIYSL 279 (703)
Q Consensus 249 ~h~~~V~-~l~~spdg~~l~s~s~Dg-v~iwd~ 279 (703)
+|...+. .++|||||++|++|+.|+ |+|||.
T Consensus 323 gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 323 PVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp CC--CCCCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred CCCCCeEEEEEECCCCCEEEEEECCCcEEEecC
Confidence 8887665 589999999999999999 999985
No 103
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.92 E-value=8e-24 Score=232.29 Aligned_cols=242 Identities=16% Similarity=0.259 Sum_probs=208.1
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
+++|| .+++++ ..+.+|.+.|.+++|++ +.+++|+.||+|++||+.+++.......|...|.+++|+ ++.+
T Consensus 141 i~vwd~~~~~~~--~~~~~h~~~v~~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~--~~~l 212 (445)
T 2ovr_B 141 LKVWSAVTGKCL--RTLVGHTGGVWSSQMRD----NIIISGSTDRTLKVWNAETGECIHTLYGHTSTVRCMHLH--EKRV 212 (445)
T ss_dssp EEEEETTTCCEE--EECCCCSSCEEEEEEET----TEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEEE--TTEE
T ss_pred EEEEECCCCcEE--EEEcCCCCCEEEEEecC----CEEEEEeCCCeEEEEECCcCcEEEEECCCCCcEEEEEec--CCEE
Confidence 66777 578888 89999999999999975 699999999999999999998777788899999999996 5789
Q ss_pred EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc
Q psy7108 107 VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI 186 (703)
Q Consensus 107 as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~ 186 (703)
++|+.||.|++||+++++.+..+.+|.. .|.+++| +++.+++++.|+.|++||+++++
T Consensus 213 ~s~s~dg~i~~wd~~~~~~~~~~~~~~~--------------------~v~~~~~--~~~~l~~~~~dg~i~iwd~~~~~ 270 (445)
T 2ovr_B 213 VSGSRDATLRVWDIETGQCLHVLMGHVA--------------------AVRCVQY--DGRRVVSGAYDFMVKVWDPETET 270 (445)
T ss_dssp EEEETTSEEEEEESSSCCEEEEEECCSS--------------------CEEEEEE--CSSCEEEEETTSCEEEEEGGGTE
T ss_pred EEEeCCCEEEEEECCCCcEEEEEcCCcc--------------------cEEEEEE--CCCEEEEEcCCCEEEEEECCCCc
Confidence 9999999999999999999988888765 8999998 68899999999999999999999
Q ss_pred eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108 187 LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW 266 (703)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l 266 (703)
++..+..+. ..+.++.+ ++..+++++.++ .|++||+++++....+.+|...+.++.++ ++++
T Consensus 271 ~~~~~~~~~--------~~v~~~~~--~~~~l~~~~~d~------~i~i~d~~~~~~~~~~~~~~~~v~~~~~~--~~~l 332 (445)
T 2ovr_B 271 CLHTLQGHT--------NRVYSLQF--DGIHVVSGSLDT------SIRVWDVETGNCIHTLTGHQSLTSGMELK--DNIL 332 (445)
T ss_dssp EEEEECCCS--------SCEEEEEE--CSSEEEEEETTS------CEEEEETTTCCEEEEECCCCSCEEEEEEE--TTEE
T ss_pred EeEEecCCC--------CceEEEEE--CCCEEEEEeCCC------eEEEEECCCCCEEEEEcCCcccEEEEEEe--CCEE
Confidence 888876544 37888888 788888887764 79999999999999999999999888774 6799
Q ss_pred EEEeCCC-EEEEEcCCCceeccee---------eeEEEccchhhhHhhcCCcceEEEEEEecCchh
Q psy7108 267 VAATTEG-VHIYSLDSGYVFDPFL---------LDISITPQSVKEALADKDYAKALMMSLKLNEQG 322 (703)
Q Consensus 267 ~s~s~Dg-v~iwd~~~~~~~~~~~---------~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~~ 322 (703)
++++.|| |++||+.+++....+. .+++++ + ..+++++.++.+.+ |++....
T Consensus 333 ~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~--~--~~l~s~~~dg~v~i-wd~~~~~ 393 (445)
T 2ovr_B 333 VSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFN--K--NFVITSSDDGTVKL-WDLKTGE 393 (445)
T ss_dssp EEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEEC--S--SEEEEEETTSEEEE-EETTTCC
T ss_pred EEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEEC--C--CEEEEEeCCCeEEE-EECCCCc
Confidence 9999999 9999999887754442 345664 4 57889999999999 9987653
No 104
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.92 E-value=7.6e-24 Score=262.26 Aligned_cols=242 Identities=13% Similarity=0.215 Sum_probs=211.3
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
..+.+|.+.|++++|+| ++++|++|+.||+|++||+.+++....+..|.+.|.+++|+|+|++|++++.|++|++||+
T Consensus 609 ~~~~~h~~~v~~~~~s~--~~~~l~s~~~d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~ 686 (1249)
T 3sfz_A 609 LVVRPHTDAVYHACFSQ--DGQRIASCGADKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDS 686 (1249)
T ss_dssp EEECCCSSCEEEEEECT--TSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEET
T ss_pred EEEecccccEEEEEECC--CCCEEEEEeCCCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEEC
Confidence 56789999999999999 9999999999999999999999888888889999999999999999999999999999999
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
.+++.+..+.+|.. .|.+++|+| ++..+++|+.|+.|++||++++++...+..|.
T Consensus 687 ~~~~~~~~~~~~~~--------------------~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~--- 743 (1249)
T 3sfz_A 687 ATGKLVHTYDEHSE--------------------QVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHT--- 743 (1249)
T ss_dssp TTCCEEEEEECCSS--------------------CEEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCS---
T ss_pred CCCceEEEEcCCCC--------------------cEEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCC---
Confidence 99999999988765 899999999 55689999999999999999999888876544
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-------------CccceEEEEEcCCCCE
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-------------PEVRVFCVKFSPTGQA 265 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------------h~~~V~~l~~spdg~~ 265 (703)
..|.+++|+|+++.+++++.++ .|++||+.+++....+.. ....+.+++|+|+|+.
T Consensus 744 -----~~v~~~~~sp~~~~l~s~s~dg------~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~dg~~ 812 (1249)
T 3sfz_A 744 -----NSVNHCRFSPDDELLASCSADG------TLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVIVKCCSWSADGDK 812 (1249)
T ss_dssp -----SCEEEEEECSSTTEEEEEESSS------EEEEEEGGGTEEEEEEECCCCC--------CCCCCBCCCCBCTTSSE
T ss_pred -----CCEEEEEEecCCCEEEEEECCC------eEEEEeCCCCcccceecccccccccCCccccccceEEEEEECCCCCE
Confidence 4899999999999999888764 899999998865544331 2336889999999999
Q ss_pred EEEEeCCCEEEEEcCCCceecce-------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 266 WVAATTEGVHIYSLDSGYVFDPF-------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 266 l~s~s~Dgv~iwd~~~~~~~~~~-------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+++++.+.+.+|++.++...... ...++|+|++ ..+++++.++.+.+ |++...
T Consensus 813 l~~~~~~~v~~~d~~~~~~~~~~~~~~~~~v~~~~~sp~~--~~l~~~~~dg~v~v-wd~~~~ 872 (1249)
T 3sfz_A 813 IIVAAKNKVLLFDIHTSGLLAEIHTGHHSTIQYCDFSPYD--HLAVIALSQYCVEL-WNIDSR 872 (1249)
T ss_dssp EEEEETTEEEEEETTTCCEEEEEECSSSSCCCEEEECSST--TEEEEECSSSCEEE-EETTTT
T ss_pred EEEEcCCcEEEEEecCCCceeEEcCCCCCceEEEEEcCCC--CEEEEEeCCCeEEE-EEcCCC
Confidence 99988555999999988765443 3568999999 88899999999998 887754
No 105
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.92 E-value=2.9e-24 Score=232.48 Aligned_cols=236 Identities=14% Similarity=0.158 Sum_probs=191.1
Q ss_pred CeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCce----eEEEecCCCcEEEEEEec-CCCEEEEEECCCeEEEEEcCC
Q psy7108 49 PVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDT----QHETIQLLSDALCVAYKP-DGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 49 ~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~----~~~~~~~~~~V~~v~~sp-dg~~las~s~dg~I~vwd~~~ 122 (703)
....++++| +.. ++++++.||.|++|++..... ...+..|.+.|.+++|+| ++++|++|+.||.|++||+.+
T Consensus 36 ~~~~~~~~~--~~~~~~~~~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~~~~l~s~s~dg~v~vw~~~~ 113 (402)
T 2aq5_A 36 DSGFCAVNP--KFMALICEASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHNDNVIASGSEDCTVMVWEIPD 113 (402)
T ss_dssp SSCSEEECS--SEEEEEBCCSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTCTTEEEEEETTSEEEEEECCT
T ss_pred CCCcEEECC--CeEEEEEEEcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCCCCEEEEEeCCCeEEEEEccC
Confidence 445688998 554 444678999999999966532 233456999999999999 999999999999999999998
Q ss_pred C-------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEEEEEecCCcEEEEECCCCceEEEEEec
Q psy7108 123 A-------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCILAAGQSKYICIYSSREGILLKKFTIT 194 (703)
Q Consensus 123 ~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l~s~s~dg~I~lwD~~~~~~~~~~~~~ 194 (703)
+ +.+..+.+|.. .|.+++|+|++ +.|++++.|+.|++||+++++.+..+.
T Consensus 114 ~~~~~~~~~~~~~~~~h~~--------------------~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~-- 171 (402)
T 2aq5_A 114 GGLVLPLREPVITLEGHTK--------------------RVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLG-- 171 (402)
T ss_dssp TCCSSCBCSCSEEEECCSS--------------------CEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEEC--
T ss_pred CCCccccCCceEEecCCCC--------------------eEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEe--
Confidence 7 45566666554 89999999998 699999999999999999998887762
Q ss_pred cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cCCccc-eEEEEEcCCCCEEEEE---
Q psy7108 195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LKPEVR-VFCVKFSPTGQAWVAA--- 269 (703)
Q Consensus 195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~h~~~-V~~l~~spdg~~l~s~--- 269 (703)
..+|...|.+++|+|+++.+++++.++ .|++||+++++.+..+ ..|... +.+++|+|++++++++
T Consensus 172 ----~~~~~~~v~~~~~~~~~~~l~~~~~d~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~ 241 (402)
T 2aq5_A 172 ----PDVHPDTIYSVDWSRDGALICTSCRDK------RVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSR 241 (402)
T ss_dssp ----TTTCCSCEEEEEECTTSSCEEEEETTS------EEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEEEEEEECT
T ss_pred ----cCCCCCceEEEEECCCCCEEEEEecCC------cEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcEEEEeccC
Confidence 023445899999999999999888764 8999999999888887 677765 8999999999999999
Q ss_pred eCCC-EEEEEcCCCce-e-------cceeeeEEEccchhhhHh-hcCCcceEEEEEEecCch
Q psy7108 270 TTEG-VHIYSLDSGYV-F-------DPFLLDISITPQSVKEAL-ADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 270 s~Dg-v~iwd~~~~~~-~-------~~~~~~~~~spd~~~~~l-~sg~~~~~l~la~~l~~~ 321 (703)
+.|+ |++||+.++.. . ......++|+|++ ..+ .+++.++.+.+ |++...
T Consensus 242 ~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~--~~l~~~g~~dg~i~i-~d~~~~ 300 (402)
T 2aq5_A 242 MSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDT--NIVYLCGKGDSSIRY-FEITSE 300 (402)
T ss_dssp TCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTT--TEEEEEETTCSCEEE-EEECSS
T ss_pred CCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCC--CEEEEEEcCCCeEEE-EEecCC
Confidence 7888 99999987654 1 1123568999998 555 46777899998 887654
No 106
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.92 E-value=7.2e-23 Score=220.10 Aligned_cols=258 Identities=13% Similarity=0.191 Sum_probs=203.5
Q ss_pred cccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCCCc
Q psy7108 15 THEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLLSD 93 (703)
Q Consensus 15 ~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~ 93 (703)
...+.+..+++|+.. +++++ ..+.+|. .+.+++|+| +++.+ ++++.|++|++||+.+++.... ..+...
T Consensus 6 vs~~~d~~v~v~d~~----~~~~~--~~~~~~~-~~~~~~~s~--dg~~l~~~~~~d~~i~v~d~~~~~~~~~-~~~~~~ 75 (391)
T 1l0q_A 6 IANSESDNISVIDVT----SNKVT--ATIPVGS-NPMGAVISP--DGTKVYVANAHSNDVSIIDTATNNVIAT-VPAGSS 75 (391)
T ss_dssp EEETTTTEEEEEETT----TTEEE--EEEECSS-SEEEEEECT--TSSEEEEEEGGGTEEEEEETTTTEEEEE-EECSSS
T ss_pred EEcCCCCEEEEEECC----CCeEE--EEeecCC-CcceEEECC--CCCEEEEECCCCCeEEEEECCCCeEEEE-EECCCC
Confidence 334455566766654 67777 7787775 489999999 99876 6777999999999988855444 444559
Q ss_pred EEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEE
Q psy7108 94 ALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAA 171 (703)
Q Consensus 94 V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~ 171 (703)
+.+++|+|+++.|++++ .++.|++||+.+++.+..+..+. .+.+++|+|+++.+ +++
T Consensus 76 v~~~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~~ 134 (391)
T 1l0q_A 76 PQGVAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVKTGK---------------------SPLGLALSPDGKKLYVTN 134 (391)
T ss_dssp EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSS---------------------SEEEEEECTTSSEEEEEE
T ss_pred ccceEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEeCCC---------------------CcceEEECCCCCEEEEEe
Confidence 99999999999886555 57999999999999888777643 58999999999987 677
Q ss_pred ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc
Q psy7108 172 GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE 251 (703)
Q Consensus 172 s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~ 251 (703)
+.|+.|++||+++++.+..+..+. .+..++|+|+|+.+++++..+ ..|++||+++++....+. +.
T Consensus 135 ~~~~~v~~~d~~~~~~~~~~~~~~---------~~~~~~~~~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~-~~ 199 (391)
T 1l0q_A 135 NGDKTVSVINTVTKAVINTVSVGR---------SPKGIAVTPDGTKVYVANFDS-----MSISVIDTVTNSVIDTVK-VE 199 (391)
T ss_dssp TTTTEEEEEETTTTEEEEEEECCS---------SEEEEEECTTSSEEEEEETTT-----TEEEEEETTTTEEEEEEE-CS
T ss_pred CCCCEEEEEECCCCcEEEEEecCC---------CcceEEECCCCCEEEEEeCCC-----CEEEEEECCCCeEEEEEe-cC
Confidence 789999999999998887776432 457899999999886654432 389999999987765554 45
Q ss_pred cceEEEEEcCCCCEEEEEe---CCC-EEEEEcCCCceeccee-----eeEEEccchhhhHh-hcCCcceEEEEEEecCch
Q psy7108 252 VRVFCVKFSPTGQAWVAAT---TEG-VHIYSLDSGYVFDPFL-----LDISITPQSVKEAL-ADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 252 ~~V~~l~~spdg~~l~s~s---~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l-~sg~~~~~l~la~~l~~~ 321 (703)
..+.+++|+|+|+++++++ .++ |++||+.+++....+. ..++|+|++ ..+ .+++.++.+.+ |++...
T Consensus 200 ~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~s~~~d~~v~v-~d~~~~ 276 (391)
T 1l0q_A 200 AAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGTNKITARIPVGPDPAGIAVTPDG--KKVYVALSFXNTVSV-IDTATN 276 (391)
T ss_dssp SEEEEEEECTTSSEEEEEEECSSCCEEEEEETTTTEEEEEEECCSSEEEEEECTTS--SEEEEEETTTTEEEE-EETTTT
T ss_pred CCccceEECCCCCEEEEEecCcCCCcEEEEECCCCeEEEEEecCCCccEEEEccCC--CEEEEEcCCCCEEEE-EECCCC
Confidence 6789999999999998887 577 9999999887654443 568999998 544 66677888888 887754
No 107
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.3e-24 Score=249.56 Aligned_cols=222 Identities=15% Similarity=0.250 Sum_probs=180.5
Q ss_pred ceeecc---CCCccccccccCCCcCeEEEEEcCCCC--CCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEe
Q psy7108 28 VKKGDM---AARVLKPEVLSGHEGPVSCIEFSPVLS--STGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYK 100 (703)
Q Consensus 28 v~~~d~---tg~~~~~~~l~gH~~~V~~l~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~s 100 (703)
+++|+. +++++ ..+.+|.++|++++|+| + +++|++|+.||+|++||+.++. .......|...|.+++|+
T Consensus 33 I~vwd~~~~~~~~~--~~l~~h~~~V~~l~~s~--~~~~~~l~s~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~s 108 (753)
T 3jro_A 33 IKIFEVEGETHKLI--DTLTGHEGPVWRVDWAH--PKFGTILASCSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWA 108 (753)
T ss_dssp EEEEEEETTEEEEE--EEECCCSSCEEEEEECC--TTSCSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEEC
T ss_pred EEEEecCCCCCccc--eeccCCcCceEEEEecC--CCCCCEEEEEeCCCeEEEEECCCCcccccccccCCCCCeEEEEEC
Confidence 555653 45566 78899999999999998 6 9999999999999999998875 455666799999999999
Q ss_pred cC--CCEEEEEECCCeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-------------
Q psy7108 101 PD--GTEIVVATLDGQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA------------- 163 (703)
Q Consensus 101 pd--g~~las~s~dg~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp------------- 163 (703)
|+ ++.+++|+.||.|++||++++.. ...+.+| ...|.+++|+|
T Consensus 109 p~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~--------------------~~~v~~l~~~p~~~~~~~~~~~~~ 168 (753)
T 3jro_A 109 PHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAH--------------------AIGVNSASWAPATIEEDGEHNGTK 168 (753)
T ss_dssp CGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECC--------------------SSCEEEEEECCCC---------CG
T ss_pred CCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecC--------------------CCceEEEEecCcccccccccccCC
Confidence 99 99999999999999999987732 3334444 34899999999
Q ss_pred CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC---CCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108 164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF---GNVSLIETRETHEGGNVVLKLPGVKK 240 (703)
Q Consensus 164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd---g~~l~~~~~~~~~~~~~~i~iwd~~~ 240 (703)
+++.+++|+.||.|++||++++........ .+.+|...|.+++|+|+ ++.+++++.++ .|++||+.+
T Consensus 169 d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~----~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg------~I~iwd~~~ 238 (753)
T 3jro_A 169 ESRKFVTGGADNLVKIWKYNSDAQTYVLES----TLEGHSDWVRDVAWSPTVLLRSYLASVSQDR------TCIIWTQDN 238 (753)
T ss_dssp GGCCEEEEETTSCEEEEEEETTTTEEEEEE----EECCCSSCEEEEEECCCCSSSEEEEEEESSS------CEEEEEESS
T ss_pred CCCEEEEEECCCeEEEEeccCCcccceeee----eecCCCCcEEEEEeccCCCCCCEEEEEecCC------EEEEecCCC
Confidence 589999999999999999988743221110 12245568999999999 88888877664 899999988
Q ss_pred Cc-----cceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108 241 GD-----MAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY 283 (703)
Q Consensus 241 ~~-----~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~ 283 (703)
++ .......|...|++++|+|+|+++++++.|| |++|++.++.
T Consensus 239 ~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~ 287 (753)
T 3jro_A 239 EQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEG 287 (753)
T ss_dssp SSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSS
T ss_pred CCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCC
Confidence 64 3333446888999999999999999999999 9999998644
No 108
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.4e-23 Score=229.54 Aligned_cols=197 Identities=12% Similarity=0.097 Sum_probs=159.6
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC-----cEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS-----DALCVAYKPDGTEIVVATLDGQLIMFD 119 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-----~V~~v~~spdg~~las~s~dg~I~vwd 119 (703)
+|.+.|.+++||| +|+.||+++.||+|++||.++ .... ..|.. .|.+++|||||++||+|+.||+|++||
T Consensus 83 ~~~~~V~~vawSP--dG~~LAs~s~dg~V~iwd~~~--~l~~-l~~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd 157 (588)
T 2j04_A 83 QPVCYPRVCKPSP--IDDWMAVLSNNGNVSVFKDNK--MLTN-LDSKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFS 157 (588)
T ss_dssp SCSCCEEEEEECS--SSSCEEEEETTSCEEEEETTE--EEEE-CCCSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEE
T ss_pred CCCCcEEEEEECC--CCCEEEEEeCCCcEEEEeCCc--eeee-ccCCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEE
Confidence 5689999999999 999999999999999999543 3333 33544 499999999999999999999999999
Q ss_pred cCCCc-------EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce---EE
Q psy7108 120 VESAA-------QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL---LK 189 (703)
Q Consensus 120 ~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~---~~ 189 (703)
+.++. .+.++..+.. +|...|.+++|+||| +++++.|++|++||+.++.. ..
T Consensus 158 ~~~~~l~~~~~i~l~ti~~~~~----------------gh~~~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~ 219 (588)
T 2j04_A 158 IRKNSENTPEFYFESSIRLSDA----------------GSKDWVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSR 219 (588)
T ss_dssp CCCCTTTCCCCEEEEEEECSCT----------------TCCCCEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEE
T ss_pred CCCCccccccceeeeeeecccc----------------cccccEEEEEEcCCc--EEEEeCCCeEEEEECCCCcccccee
Confidence 99875 3566644321 244589999999999 88899999999999988763 23
Q ss_pred EEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEE--cCCCCEEE
Q psy7108 190 KFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKF--SPTGQAWV 267 (703)
Q Consensus 190 ~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~--spdg~~l~ 267 (703)
++.. +|...|.+++|+ |+.+++++. +.|++||+.+++......+|...|.+++| +||+..++
T Consensus 220 tL~~-------~h~~~V~svaFs--g~~LASa~~-------~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~La 283 (588)
T 2j04_A 220 MIQN-------ASRRKITDLKIV--DYKVVLTCP-------GYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTILL 283 (588)
T ss_dssp EEEC-------CCSSCCCCEEEE--TTEEEEECS-------SEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEEEE
T ss_pred eecc-------cccCcEEEEEEE--CCEEEEEeC-------CeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCEEE
Confidence 4421 234589999999 677777653 28999999988774445489999999999 99999999
Q ss_pred EEeCCCEEEEEcC
Q psy7108 268 AATTEGVHIYSLD 280 (703)
Q Consensus 268 s~s~Dgv~iwd~~ 280 (703)
++++||.++|..+
T Consensus 284 ~a~edG~klw~~d 296 (588)
T 2j04_A 284 MSNKTSYKVLLED 296 (588)
T ss_dssp ECSSCEEEEEESS
T ss_pred EEcCCCCEEEeec
Confidence 9999998888864
No 109
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.92 E-value=1e-23 Score=240.39 Aligned_cols=235 Identities=12% Similarity=0.142 Sum_probs=201.1
Q ss_pred cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----ceeEEEecCCCc-EEEEEEec--CCCEEEEEECCCeEE
Q psy7108 44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----DTQHETIQLLSD-ALCVAYKP--DGTEIVVATLDGQLI 116 (703)
Q Consensus 44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----~~~~~~~~~~~~-V~~v~~sp--dg~~las~s~dg~I~ 116 (703)
..|.+.|++++|+| ++++|++++ |+.|++||+.++ +....+..|... |.+++|+| ++++|++++.||.|+
T Consensus 15 ~~~~~~v~~~~~sp--dg~~l~~~~-~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~~~~l~s~~~dg~v~ 91 (615)
T 1pgu_A 15 STQRNFTTHLSYDP--TTNAIAYPC-GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCSGDESGKVI 91 (615)
T ss_dssp CCCTTCCCCCEEET--TTTEEEEEE-TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTTCCEEEEEETTSEEE
T ss_pred CCccCceeEEEECC--CCCEEEEec-CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCCCCEEEEecCCCEEE
Confidence 46899999999999 999999998 789999999988 777888889999 99999999 999999999999999
Q ss_pred EEEcCCC--------cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----CcEEEEECCC
Q psy7108 117 MFDVESA--------AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KYICIYSSRE 184 (703)
Q Consensus 117 vwd~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~I~lwD~~~ 184 (703)
+||+.++ +....+..|.. .|.+++|+|++++|++++.+ +.|++|| .
T Consensus 92 vw~~~~~~~~~~~~~~~~~~~~~~~~--------------------~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d--~ 149 (615)
T 1pgu_A 92 VWGWTFDKESNSVEVNVKSEFQVLAG--------------------PISDISWDFEGRRLCVVGEGRDNFGVFISWD--S 149 (615)
T ss_dssp EEEEEEEGGGTEEEEEEEEEEECCSS--------------------CEEEEEECTTSSEEEEEECCSSCSEEEEETT--T
T ss_pred EEeCCCCcccccccccccchhhcccc--------------------cEEEEEEeCCCCEEEEeccCCCCccEEEEEE--C
Confidence 9999755 55556655543 89999999999999999987 6888888 4
Q ss_pred CceEEEEEeccCCccccccccceeeeeccCCC-EEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc---ceEEEEEc
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGN-VSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV---RVFCVKFS 260 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~-~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~---~V~~l~~s 260 (703)
++.+..+.. |...|.+++|+|+++ .+++++.+ ..+++||..+++....+..|.. .|.+++|+
T Consensus 150 ~~~~~~~~~--------~~~~v~~~~~~~~~~~~l~~~~~d------~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~ 215 (615)
T 1pgu_A 150 GNSLGEVSG--------HSQRINACHLKQSRPMRSMTVGDD------GSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFS 215 (615)
T ss_dssp CCEEEECCS--------CSSCEEEEEECSSSSCEEEEEETT------TEEEEEETTTBEEEEEECSSSCTTCCEEEEEEC
T ss_pred CCcceeeec--------CCccEEEEEECCCCCcEEEEEeCC------CcEEEEeCCCcceeeeecccCCCCceEEEEEEC
Confidence 556655543 445899999999998 56665554 3899999999999989999998 99999999
Q ss_pred CC-CCEEEEEeCCC-EEEEEcCCCceecce----------eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 261 PT-GQAWVAATTEG-VHIYSLDSGYVFDPF----------LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 261 pd-g~~l~s~s~Dg-v~iwd~~~~~~~~~~----------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
|+ ++++++++.|+ |++||+.+++....+ ...++|+ ++ ..+++++.++.+.+ |++...
T Consensus 216 ~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~-~~--~~l~~~~~d~~i~~-wd~~~~ 284 (615)
T 1pgu_A 216 PDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWL-DS--QKFATVGADATIRV-WDVTTS 284 (615)
T ss_dssp STTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEES-SS--SEEEEEETTSEEEE-EETTTT
T ss_pred CCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEc-CC--CEEEEEcCCCcEEE-EECCCC
Confidence 99 99999999999 999999988765544 3568888 77 78899999999998 988754
No 110
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-23 Score=248.93 Aligned_cols=210 Identities=12% Similarity=0.113 Sum_probs=175.7
Q ss_pred ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108 43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~ 122 (703)
..||.+.|++++|+| ++++||+|+.||+|++|+..+.+ ......|...|.+++|+| |++|++++.|++|++||+++
T Consensus 13 ~~gh~~~V~~lafsp--dg~~lAsgs~Dg~I~lw~~~~~~-~~~~~~~~~~V~~l~fsp-g~~L~S~s~D~~v~lWd~~~ 88 (902)
T 2oaj_A 13 KYGMSSKPIAAAFDF--TQNLLAIATVTGEVHIYGQQQVE-VVIKLEDRSAIKEMRFVK-GIYLVVINAKDTVYVLSLYS 88 (902)
T ss_dssp EEECSSCEEEEEEET--TTTEEEEEETTSEEEEECSTTCE-EEEECSSCCCEEEEEEET-TTEEEEEETTCEEEEEETTT
T ss_pred ccCCCCCcEEEEECC--CCCEEEEEeCCCEEEEEeCCCcE-EEEEcCCCCCEEEEEEcC-CCEEEEEECcCeEEEEECCC
Confidence 358999999999999 99999999999999999987663 344456888999999999 88999999999999999999
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccC----Cc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQN----KS 198 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~----~~ 198 (703)
++.+..+..+ . .|++++|+|++++|++|+.||.|++||++++++. .+..+.. ..
T Consensus 89 ~~~~~~~~~~-~--------------------~V~~v~~sp~g~~l~sgs~dg~V~lwd~~~~~~~-~~~i~~~~~~~~~ 146 (902)
T 2oaj_A 89 QKVLTTVFVP-G--------------------KITSIDTDASLDWMLIGLQNGSMIVYDIDRDQLS-SFKLDNLQKSSFF 146 (902)
T ss_dssp CSEEEEEECS-S--------------------CEEEEECCTTCSEEEEEETTSCEEEEETTTTEEE-EEEECCHHHHHTC
T ss_pred CcEEEEEcCC-C--------------------CEEEEEECCCCCEEEEEcCCCcEEEEECCCCccc-cceeccccccccc
Confidence 9988877532 2 7999999999999999999999999999988763 3322110 23
Q ss_pred cccccccceeeeeccCC-CEEEEEcccCCCCCeeEEECCCCCCCccceeecCC------------------ccceEEEEE
Q psy7108 199 LDGINDFINRRKMTEFG-NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP------------------EVRVFCVKF 259 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg-~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h------------------~~~V~~l~~ 259 (703)
..+|...|.+++|+|++ ..+++++.+ ..+ +||+++++....+..| ...|.+++|
T Consensus 147 ~~~h~~~V~sl~~sp~~~~~l~~g~~d------g~v-lWd~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~f 219 (902)
T 2oaj_A 147 PAARLSPIVSIQWNPRDIGTVLISYEY------VTL-TYSLVENEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLY 219 (902)
T ss_dssp SSSCCCCCCEEEEETTEEEEEEEECSS------CEE-EEETTTTEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEE
T ss_pred cccCCCCeEEEEEccCCCCEEEEEeCC------CcE-EEECCCCceEEEEecccCCcCCCcccccccccccCCCeEEEEE
Confidence 45677899999999975 566665554 378 9999998877766654 467999999
Q ss_pred cCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108 260 SPTGQAWVAATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 260 spdg~~l~s~s~Dg-v~iwd~~~~~~~ 285 (703)
+|+|++|++++.|+ |++||+.+++.+
T Consensus 220 spdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 220 HPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp CTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred cCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 99999999999999 999999887754
No 111
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.92 E-value=5.1e-24 Score=230.15 Aligned_cols=239 Identities=11% Similarity=0.030 Sum_probs=160.8
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEE-----EecCCCcEEEEEEec--------CCCEEEEEECC
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHE-----TIQLLSDALCVAYKP--------DGTEIVVATLD 112 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~-----~~~~~~~V~~v~~sp--------dg~~las~s~d 112 (703)
|...+....+.+ ++.+|++|+.|++|+|||+.+++.... ..+|.+.|.+++|+| |+++||+|+.|
T Consensus 88 ~~~~~~~~~~~~--~~~~las~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D 165 (393)
T 4gq1_A 88 HDGDGNVNSSPV--YSLFLACVCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDD 165 (393)
T ss_dssp ---------CCE--EEEEEEEEETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETT
T ss_pred cCCCcceeecCC--CCCEEEEEeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECC
Confidence 344444444455 677899999999999999988754332 235899999999998 88999999999
Q ss_pred CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEECCCCceEEEE
Q psy7108 113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSSREGILLKKF 191 (703)
Q Consensus 113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~~~~~~~~~~ 191 (703)
++|++||++++.....+..|.. .|.+++|+|++. +|++++.|++|++||+++++.....
T Consensus 166 ~tv~~Wd~~~~~~~~~~~~~~~--------------------~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~ 225 (393)
T 4gq1_A 166 CTLIIWRLTDEGPILAGYPLSS--------------------PGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEEN 225 (393)
T ss_dssp SEEEEEEEETTEEEEEEEECSS--------------------CEEEEEEETTEEEEEEEEETTSEEEEEETTCCC-----
T ss_pred CeEEEEECCCCceeeeecCCCC--------------------CcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccc
Confidence 9999999998888777777655 899999999874 7999999999999999988765443
Q ss_pred EeccC-----------------Cccccccccceeeeec-cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc
Q psy7108 192 TITQN-----------------KSLDGINDFINRRKMT-EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR 253 (703)
Q Consensus 192 ~~~~~-----------------~~~~~~~~~v~~~~~s-pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~ 253 (703)
..+.. ....++...+.++.|+ ++|+.++.++.++ .+++||+..++....+..|...
T Consensus 226 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~------~i~vwd~~~~~~~~~l~~~~~~ 299 (393)
T 4gq1_A 226 SQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSG------AWLRWNLFANNDYNEISDSTMK 299 (393)
T ss_dssp -----CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTS------EEEEEEC---------------
T ss_pred cccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCC------CEEEEECccCCCCceEeeecCc
Confidence 32111 1123566788888886 8999988877663 8999999888766666555554
Q ss_pred eEEEEEcC--------------------CCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcC
Q psy7108 254 VFCVKFSP--------------------TGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADK 306 (703)
Q Consensus 254 V~~l~~sp--------------------dg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg 306 (703)
+..+.++| ++.++++|+.|| |++||+.+++.... .+.+++|+||| ..|+.+
T Consensus 300 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG--~~LA~a 377 (393)
T 4gq1_A 300 LGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDG--SHLAIA 377 (393)
T ss_dssp ----CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTS--SEEEEE
T ss_pred cccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCC--CEEEEE
Confidence 44443333 233567788899 99999998876433 34689999999 888888
Q ss_pred CcceEEEE
Q psy7108 307 DYAKALMM 314 (703)
Q Consensus 307 ~~~~~l~l 314 (703)
+.++.+.+
T Consensus 378 s~~Gv~lv 385 (393)
T 4gq1_A 378 TEGSVLLT 385 (393)
T ss_dssp ESSEEEEE
T ss_pred eCCCeEEE
Confidence 87665443
No 112
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.92 E-value=1.3e-23 Score=223.71 Aligned_cols=269 Identities=9% Similarity=0.074 Sum_probs=177.2
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE-EEEECC
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI-VVATLD 112 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l-as~s~d 112 (703)
+.+.+ ..+.+|.+.|++++|+| ||++|++|+.|+ +++|++.+...... .+...+..+++.++++.+ ++++.|
T Consensus 8 ~~~~~--~~~~~h~~~V~~v~fs~--dg~~la~g~~~~-~~iw~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~d 80 (355)
T 3vu4_A 8 TRNPI--VPENHVSNPVTDYEFNQ--DQSCLILSTLKS-FEIYNVHPVAHIMS--QEMRHLSKVRMLHRTNYVAFVTGVK 80 (355)
T ss_dssp -------------CCCCCEEEECT--TSSEEEEECSSE-EEEEEETTEEEEEE--EECSCCCEEEECTTSSEEEEECSST
T ss_pred ccCCc--cccccCCCceEEEEECC--CCCEEEEEcCCE-EEEEecCCcceeee--eecCCeEEEEEcCCCCEEEEEECCc
Confidence 34555 67789999999999999 999999998775 78999877643332 222357888999998887 456778
Q ss_pred CeEEEEEcCCCcEEEEEeccccCCCCCCCCccc--------------hhhccc--CCccEEEEEEcCCCCEEEE--EecC
Q psy7108 113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLV--------------TREQSL--KAKAVSTVCYSADGSCILA--AGQS 174 (703)
Q Consensus 113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~~~~~--~~~~V~~i~~spdg~~l~s--~s~d 174 (703)
++|++||..+++.+..+..+..+..-....+.. ...... .......+++++ ..+++ |+.|
T Consensus 81 ~~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~~~~~~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~--~~la~~sg~~~ 158 (355)
T 3vu4_A 81 EVVHIWDDVKKQDVSRIKVDAPVKDLFLSREFIVVSYGDVISVFKFGNPWKRITDDIRFGGVCEFSN--GLLVYSNEFNL 158 (355)
T ss_dssp TEEEEEETTTTEEEEEEECSSCEEEEEECSSEEEEEETTEEEEEESSTTCCBSSCCEEEEEEEEEET--TEEEEEESSCT
T ss_pred cEEEEEECCCCcEEEEEECCCceEEEEEcCCEEEEEEcCEEEEEECCCCceeeEEeccCCceEEEEc--cEEEEeCCCcC
Confidence 999999999999888776433110000000000 000000 000223344454 45555 4678
Q ss_pred CcEEEEECCCCceEEEEEec-------c-CCccccccccceeeeeccCCCEEEEEcccCCCCCeeE-EECCCCCCCccce
Q psy7108 175 KYICIYSSREGILLKKFTIT-------Q-NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV-LKLPGVKKGDMAA 245 (703)
Q Consensus 175 g~I~lwD~~~~~~~~~~~~~-------~-~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~-i~iwd~~~~~~~~ 245 (703)
|.|++||++++......... . ...+.+|...|.+++|+|+|+++++++.++ + |++||+++++++.
T Consensus 159 g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~------~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 159 GQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDG------TIIRVFKTEDGVLVR 232 (355)
T ss_dssp TCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEEETTC------SEEEEEETTTCCEEE
T ss_pred cEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCC------CEEEEEECCCCcEEE
Confidence 88888888876421100000 0 122345667999999999999999988764 6 9999999999998
Q ss_pred eec-C-CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----------------------------eeeEE
Q psy7108 246 RVL-K-PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-----------------------------LLDIS 293 (703)
Q Consensus 246 ~~~-~-h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----------------------------~~~~~ 293 (703)
.+. + |...|.+++|+|+|++|++++.|+ |++|++..+...... ...++
T Consensus 233 ~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a 312 (355)
T 3vu4_A 233 EFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIA 312 (355)
T ss_dssp EEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEE
T ss_pred EEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEE
Confidence 887 5 999999999999999999999999 999999765321100 14478
Q ss_pred EccchhhhHhhcCCcceEEEEEEecCc
Q psy7108 294 ITPQSVKEALADKDYAKALMMSLKLNE 320 (703)
Q Consensus 294 ~spd~~~~~l~sg~~~~~l~la~~l~~ 320 (703)
|++++ ..++.+..++.+.. |.+..
T Consensus 313 ~~~d~--~~l~~~~~dg~~~~-~~~~~ 336 (355)
T 3vu4_A 313 WISES--SLVVVWPHTRMIET-FKVVF 336 (355)
T ss_dssp ESSSS--EEEEEETTTTEEEE-EEEEE
T ss_pred EeCCC--CEEEEEeCCCeEEE-EEEEc
Confidence 99998 77888888888776 66543
No 113
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.92 E-value=6.1e-23 Score=223.64 Aligned_cols=234 Identities=12% Similarity=0.119 Sum_probs=188.6
Q ss_pred eeecccCCceEEecCC--ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-eEEE
Q psy7108 12 TRETHEGGNVVLKLPG--VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-QHET 87 (703)
Q Consensus 12 ~~~~~~~~~~~i~~~~--v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-~~~~ 87 (703)
..+..+|...+....+ +++|| .+++++ +.+.+|...|.++++++ ..|++|+.|+.+++||...... ....
T Consensus 153 v~fspdg~~lasgs~Dg~v~iWd~~~~~~~--~~~~~h~~~v~~~s~~~----~~l~sgs~d~~i~~~d~~~~~~~~~~~ 226 (420)
T 4gga_A 153 VAWIKEGNYLAVGTSSAEVQLWDVQQQKRL--RNMTSHSARVGSLSWNS----YILSSGSRSGHIHHHDVRVAEHHVATL 226 (420)
T ss_dssp EEECTTSSEEEEEETTSCEEEEETTTTEEE--EEECCCSSCEEEEEEET----TEEEEEETTSEEEEEETTSSSCEEEEE
T ss_pred EEECCCCCEEEEEECCCeEEEEEcCCCcEE--EEEeCCCCceEEEeeCC----CEEEEEeCCCceeEeeecccceeeEEe
Confidence 3344444444433333 77787 578888 89999999999988855 7999999999999999886554 4555
Q ss_pred ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE----EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108 88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ----VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA 163 (703)
Q Consensus 88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp 163 (703)
..|...+.++.|+|+++.+++++.|+.+++||..+++. +..... |...|.+++|+|
T Consensus 227 ~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~--------------------~~~~V~~~~~~p 286 (420)
T 4gga_A 227 SGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQ--------------------HQGAVKAVAWCP 286 (420)
T ss_dssp ECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECC--------------------CSSCEEEEEECT
T ss_pred cccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecc--------------------cCCceeeeeeCC
Confidence 67999999999999999999999999999999987653 223333 345899999999
Q ss_pred CCC-EEEE--EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108 164 DGS-CILA--AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK 240 (703)
Q Consensus 164 dg~-~l~s--~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~ 240 (703)
++. .+++ |+.|++|++||++++++...+..+ ..+.++.|+|+++.+++++... + ..|++||..+
T Consensus 287 ~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~~~---------~~v~~~~~~~~~~~lv~~sg~~-d---~~I~iwd~~~ 353 (420)
T 4gga_A 287 WQSNVLATGGGTSDRHIRIWNVCSGACLSAVDAH---------SQVCSILWSPHYKELISGHGFA-Q---NQLVIWKYPT 353 (420)
T ss_dssp TCTTEEEEEECTTTCEEEEEETTTTEEEEEEECS---------SCEEEEEEETTTTEEEEEECTT-T---CCEEEEETTT
T ss_pred CcccEEEEEeecCCCEEEEEeCCccccceeeccc---------cceeeeeecCCCCeEEEEEecC-C---CEEEEEECCC
Confidence 654 4554 457999999999999988877643 2678899999999988766421 1 3799999999
Q ss_pred CccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108 241 GDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYV 284 (703)
Q Consensus 241 ~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~ 284 (703)
++++..+.+|...|++++|+|||++|+||+.|+ |+||++.....
T Consensus 354 ~~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~ 398 (420)
T 4gga_A 354 MAKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDP 398 (420)
T ss_dssp CCEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSC
T ss_pred CcEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCc
Confidence 999999999999999999999999999999999 99999876543
No 114
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.91 E-value=6.2e-23 Score=223.84 Aligned_cols=249 Identities=11% Similarity=0.096 Sum_probs=202.7
Q ss_pred ceeecc-CCCccccc-----cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEec
Q psy7108 28 VKKGDM-AARVLKPE-----VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKP 101 (703)
Q Consensus 28 v~~~d~-tg~~~~~~-----~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp 101 (703)
+.+||. +++.+ + .+.+|.+.|.+++|+| ++.++++++.|+.|++||+.+++....+..|...+.+++|+|
T Consensus 146 i~~~d~~~g~~~--~~~~~~~~~~~~~~v~~~~~~~--~~~~~~s~~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 221 (433)
T 3bws_A 146 MDVLDINSGQTV--RLSPPEKYKKKLGFVETISIPE--HNELWVSQMQANAVHVFDLKTLAYKATVDLTGKWSKILLYDP 221 (433)
T ss_dssp EEEEETTTCCEE--EECCCHHHHTTCCEEEEEEEGG--GTEEEEEEGGGTEEEEEETTTCCEEEEEECSSSSEEEEEEET
T ss_pred EEEEECCCCeEe--eecCcccccccCCceeEEEEcC--CCEEEEEECCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcC
Confidence 677773 46665 4 5678999999999999 999999999999999999998877777777889999999999
Q ss_pred CCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--------
Q psy7108 102 DGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-------- 172 (703)
Q Consensus 102 dg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-------- 172 (703)
+++.+++++ .|+.|++||+++++.+..+..+. .+.+++|+|+++.+++++
T Consensus 222 ~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~g~~l~~~~~~~~~~~~ 280 (433)
T 3bws_A 222 IRDLVYCSNWISEDISVIDRKTKLEIRKTDKIG---------------------LPRGLLLSKDGKELYIAQFSASNQES 280 (433)
T ss_dssp TTTEEEEEETTTTEEEEEETTTTEEEEECCCCS---------------------EEEEEEECTTSSEEEEEEEESCTTCS
T ss_pred CCCEEEEEecCCCcEEEEECCCCcEEEEecCCC---------------------CceEEEEcCCCCEEEEEECCCCcccc
Confidence 999886555 79999999999998877765533 589999999999999887
Q ss_pred cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108 173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV 252 (703)
Q Consensus 173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~ 252 (703)
.|+.|++||+++++.+..+. +...+.+++|+|+++.+++++..+ ..+++||+.+++....+. +..
T Consensus 281 ~dg~i~~~d~~~~~~~~~~~---------~~~~~~~~~~~~~g~~l~~~~~~~-----~~v~v~d~~~~~~~~~~~-~~~ 345 (433)
T 3bws_A 281 GGGRLGIYSMDKEKLIDTIG---------PPGNKRHIVSGNTENKIYVSDMCC-----SKIEVYDLKEKKVQKSIP-VFD 345 (433)
T ss_dssp CCEEEEEEETTTTEEEEEEE---------EEECEEEEEECSSTTEEEEEETTT-----TEEEEEETTTTEEEEEEE-CSS
T ss_pred CCCeEEEEECCCCcEEeecc---------CCCCcceEEECCCCCEEEEEecCC-----CEEEEEECCCCcEEEEec-CCC
Confidence 48899999999988776653 123677899999998776664332 389999999887776654 667
Q ss_pred ceEEEEEcCCCCEEEEEeC---------------CC-EEEEEcCCCceecce-----eeeEEEccchhhhHhhcC-Ccce
Q psy7108 253 RVFCVKFSPTGQAWVAATT---------------EG-VHIYSLDSGYVFDPF-----LLDISITPQSVKEALADK-DYAK 310 (703)
Q Consensus 253 ~V~~l~~spdg~~l~s~s~---------------Dg-v~iwd~~~~~~~~~~-----~~~~~~spd~~~~~l~sg-~~~~ 310 (703)
.+.+++|+|+|+++++++. || |++||+.+++....+ ...++|+|++ ..++.+ ..++
T Consensus 346 ~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~d~ 423 (433)
T 3bws_A 346 KPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFWEAGNQPTGLDVSPDN--RYLVISDFLDH 423 (433)
T ss_dssp SEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEEECSSSEEEEEECTTS--CEEEEEETTTT
T ss_pred CCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEecCCCCCceEEEcCCC--CEEEEEECCCC
Confidence 7999999999999988776 57 999999998876544 3578999999 666554 4588
Q ss_pred EEEEEEecC
Q psy7108 311 ALMMSLKLN 319 (703)
Q Consensus 311 ~l~la~~l~ 319 (703)
.+.+ |+++
T Consensus 424 ~i~v-~~~~ 431 (433)
T 3bws_A 424 QIRV-YRRD 431 (433)
T ss_dssp EEEE-EEET
T ss_pred eEEE-EEec
Confidence 8887 8775
No 115
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=4.2e-24 Score=226.18 Aligned_cols=225 Identities=11% Similarity=0.073 Sum_probs=178.7
Q ss_pred EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC---------Cc
Q psy7108 54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES---------AA 124 (703)
Q Consensus 54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~---------~~ 124 (703)
.+.+ ++..|++|+.||+|++||+.+++...... ...|.+++|+|+ +++++.|++|++|+.+. ++
T Consensus 43 ~~~~--d~~~l~sg~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~---~~s~s~D~~i~~w~~~~~~~~~~~~~~~ 115 (343)
T 3lrv_A 43 SMYY--DKWVCMCRCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA---IISRGPCNRLLLLYPGNQITILDSKTNK 115 (343)
T ss_dssp SSSE--EEEEEEEEEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS---EEEECSTTEEEEEETTTEEEEEETTTCC
T ss_pred hhcC--CCCEEEEECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc---eEEecCCCeEEEEEccCceEEeecCCcc
Confidence 4455 78999999999999999999887655554 456778889988 99999999999997763 33
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
.+..+. ..|.+.|.+++|+| +++++++++.|++|++||++++++......+ +
T Consensus 116 ~~~~~~-------------------~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~-------~ 169 (343)
T 3lrv_A 116 VLREIE-------------------VDSANEIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAK-------S 169 (343)
T ss_dssp EEEEEE-------------------CCCSSCEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCC-------S
T ss_pred eeEEee-------------------cCCCCCEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecC-------C
Confidence 232222 12345899999999 9999999999999999999999886655322 2
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc-eeecC-CccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA-ARVLK-PEVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~-~~~~~-h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~ 280 (703)
...+.+++|+|+|..+++++.++ .|++||+++++.. ..+.. |...|.+++|+|+|.+|++++.+.|++||+.
T Consensus 170 ~~~i~~~~~~pdg~~lasg~~dg------~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~~~~v~iwd~~ 243 (343)
T 3lrv_A 170 DVEYSSGVLHKDSLLLALYSPDG------ILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMVVECDQTVVCFDLR 243 (343)
T ss_dssp SCCCCEEEECTTSCEEEEECTTS------CEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEEEEESSBEEEEETT
T ss_pred CCceEEEEECCCCCEEEEEcCCC------EEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEEEEeCCeEEEEEcC
Confidence 23689999999999999888764 8999999999877 67777 9999999999999999999994449999999
Q ss_pred CCceecce--------ee---eEEEccchhhhHhhcCCc-ceEEEEEEecCc
Q psy7108 281 SGYVFDPF--------LL---DISITPQSVKEALADKDY-AKALMMSLKLNE 320 (703)
Q Consensus 281 ~~~~~~~~--------~~---~~~~spd~~~~~l~sg~~-~~~l~la~~l~~ 320 (703)
+++....+ .. .++|+|++ .++++++. ++.+++ |++..
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~l~~~s~~d~~i~v-~~~~~ 292 (343)
T 3lrv_A 244 KDVGTLAYPTYTIPEFKTGTVTYDIDDSG--KNMIAYSNESNSLTI-YKFDK 292 (343)
T ss_dssp SSTTCBSSCCCBC-----CCEEEEECTTS--SEEEEEETTTTEEEE-EEECT
T ss_pred CCCcceeecccccccccccceEEEECCCC--CEEEEecCCCCcEEE-EEEcc
Confidence 87654322 11 49999999 78888666 778887 77653
No 116
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.1e-23 Score=229.42 Aligned_cols=237 Identities=11% Similarity=0.093 Sum_probs=189.7
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc---eeEEEe-----------------------------------
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD---TQHETI----------------------------------- 88 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~---~~~~~~----------------------------------- 88 (703)
..++.+++|+| +|++|+++ .++.|++||+.+++ ......
T Consensus 4 ~~p~~~v~~s~--dg~~l~~~-~~~~i~v~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (450)
T 2vdu_B 4 IHPLQNLLTSR--DGSLVFAI-IKNCILSFKYQSPNHWEFAGKWSDDFDKIQESRNTTAKEQQGQSSENENENKKLKSNK 80 (450)
T ss_dssp ECCCCEEEECS--SSSEEEEE-ETTEEEEEEEETTTEEEEEEEEECCC--------------------------------
T ss_pred cccEEEEEecC--CCCEEEEE-eCCeEEEEECCCCCcceeeeecCCccccccccccccchhhccccccccccccccccCc
Confidence 35889999999 99966665 57899999998887 333222
Q ss_pred -------------------cCCCcEEEEEEecCCCEE-EEEECCCeEEEEEcC--CCcEEEEEeccccCCCCCCCCccch
Q psy7108 89 -------------------QLLSDALCVAYKPDGTEI-VVATLDGQLIMFDVE--SAAQVGSVEARRDLDSGRLDTDLVT 146 (703)
Q Consensus 89 -------------------~~~~~V~~v~~spdg~~l-as~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (703)
.|.+.|.+++|+|++++| ++++.||.|++||+. +++.+..+..+.
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~d~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~~~------------- 147 (450)
T 2vdu_B 81 GDSIKRTAAKVPSPGLGAPPIYSYIRNLRLTSDESRLIACADSDKSLLVFDVDKTSKNVLKLRKRFC------------- 147 (450)
T ss_dssp -------------------CCCCCEEEEEECTTSSEEEEEEGGGTEEEEEEECSSSSSCEEEEEEEE-------------
T ss_pred CccccccCccccCCCCCCCccCCceEEEEEcCCCCEEEEEECCCCeEEEEECcCCCCceeeeeeccc-------------
Confidence 123369999999999996 889899999999999 888888776432
Q ss_pred hhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC---CCEEEEEcc
Q psy7108 147 REQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF---GNVSLIETR 223 (703)
Q Consensus 147 ~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd---g~~l~~~~~ 223 (703)
+...|.+++|+|++++|++++.|+.|++||+.++..... ....+.+|...|.+++|+|+ ++++++++.
T Consensus 148 -----~~~~v~~~~~sp~~~~l~~~~~~g~v~~~~~~~~~~~~~----~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~ 218 (450)
T 2vdu_B 148 -----FSKRPNAISIAEDDTTVIIADKFGDVYSIDINSIPEEKF----TQEPILGHVSMLTDVHLIKDSDGHQFIITSDR 218 (450)
T ss_dssp -----CSSCEEEEEECTTSSEEEEEETTSEEEEEETTSCCCSSC----CCCCSEECSSCEEEEEEEECTTSCEEEEEEET
T ss_pred -----CCCCceEEEEcCCCCEEEEEeCCCcEEEEecCCcccccc----cceeeecccCceEEEEEcCCCCCCcEEEEEcC
Confidence 133799999999999999999999999999988764320 01123345568999999999 888888776
Q ss_pred cCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------------
Q psy7108 224 ETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------------ 289 (703)
Q Consensus 224 ~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------------ 289 (703)
++ .|++||+.+++.+.. ..+|...|.+++|+ ++++|++++.|+ |++||+.+++....+.
T Consensus 219 d~------~i~vwd~~~~~~~~~~~~~h~~~v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~ 291 (450)
T 2vdu_B 219 DE------HIKISHYPQCFIVDKWLFGHKHFVSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQ 291 (450)
T ss_dssp TS------CEEEEEESCTTCEEEECCCCSSCEEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTT
T ss_pred CC------cEEEEECCCCceeeeeecCCCCceEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhc
Confidence 53 899999999988776 55899999999999 999999999999 9999999987644332
Q ss_pred -------------------eeEEEccchhhhHhhcCC-cceEEEEEEec
Q psy7108 290 -------------------LDISITPQSVKEALADKD-YAKALMMSLKL 318 (703)
Q Consensus 290 -------------------~~~~~spd~~~~~l~sg~-~~~~l~la~~l 318 (703)
..+.++|++ .+++.+. .++.+.+ |++
T Consensus 292 ~~~~~~~~~~~~~~~~~~v~~i~~~~~~--~~l~~~~~~d~~i~i-w~~ 337 (450)
T 2vdu_B 292 HLAPPRFQNENNDIIEFAVSKIIKSKNL--PFVAFFVEATKCIII-LEM 337 (450)
T ss_dssp SBC----------CBCCCEEEEEECSSS--SEEEEEETTCSEEEE-EEE
T ss_pred ccccccccccccccceEEEEEEEEeCCC--CEEEEEECCCCeEEE-EEe
Confidence 357888888 6666665 7888888 887
No 117
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.91 E-value=4.4e-24 Score=233.84 Aligned_cols=257 Identities=11% Similarity=0.121 Sum_probs=191.0
Q ss_pred ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec---CCCcEEEEEEecCC
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ---LLSDALCVAYKPDG 103 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~---~~~~V~~v~~spdg 103 (703)
|++||. +++......+.+|.++|++++|+|. ++++|+|||.||+|++||++++. ...... +...+.+++|+|++
T Consensus 144 i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~-~~~~l~s~s~D~~v~iwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~ 221 (435)
T 4e54_B 144 IMLWNFGIKDKPTFIKGIGAGGSITGLKFNPL-NTNQFYASSMEGTTRLQDFKGNI-LRVFASSDTINIWFCSLDVSASS 221 (435)
T ss_dssp EEEECSSCCSCCEEECCCSSSCCCCEEEECSS-CTTEEEEECSSSCEEEEETTSCE-EEEEECCSSCSCCCCCEEEETTT
T ss_pred EEEEECCCCCceeEEEccCCCCCEEEEEEeCC-CCCEEEEEeCCCEEEEeeccCCc-eeEEeccCCCCccEEEEEECCCC
Confidence 566663 3332211456799999999999984 68899999999999999997653 333333 33457889999999
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC-EEEEEecCCcEEEEEC
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS-CILAAGQSKYICIYSS 182 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~-~l~s~s~dg~I~lwD~ 182 (703)
++|++|+.||.|++||++. +.+..+.+| ...|.+++|+|++. ++++++.|+.|++||+
T Consensus 222 ~~l~~g~~dg~i~~wd~~~-~~~~~~~~h--------------------~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~ 280 (435)
T 4e54_B 222 RMVVTGDNVGNVILLNMDG-KELWNLRMH--------------------KKKVTHVALNPCCDWFLATASVDQTVKIWDL 280 (435)
T ss_dssp TEEEEECSSSBEEEEESSS-CBCCCSBCC--------------------SSCEEEEEECTTCSSEEEEEETTSBCCEEET
T ss_pred CEEEEEeCCCcEeeeccCc-ceeEEEecc--------------------cceEEeeeecCCCceEEEEecCcceeeEEec
Confidence 9999999999999999864 344444444 44899999999876 6788999999999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc------ceEE
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV------RVFC 256 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~------~V~~ 256 (703)
++.+....+. ...+|...|++++|+|+|+++++++.++ .|++||+.+++....+..|.. .+..
T Consensus 281 ~~~~~~~~~~-----~~~~h~~~v~~~~~spdg~~l~s~~~D~------~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~ 349 (435)
T 4e54_B 281 RQVRGKASFL-----YSLPHRHPVNAACFSPDGARLLTTDQKS------EIRVYSASQWDCPLGLIPHPHRHFQHLTPIK 349 (435)
T ss_dssp TTCCSSSCCS-----BCCBCSSCEEECCBCTTSSEEEEEESSS------CEEEEESSSSSSEEEECCCCCCCCSSSCCCB
T ss_pred ccccccceEE-----EeeeccccccceeECCCCCeeEEEcCCC------EEEEEECCCCccceEEecccccccccceeEE
Confidence 9875433221 1234667899999999999999888764 899999999887766665532 2334
Q ss_pred EEEcCCCCEEEEEe------------CCC-EEEEEcCCCceeccee-------eeE-EEccchhhhHhhcCCcceEEEEE
Q psy7108 257 VKFSPTGQAWVAAT------------TEG-VHIYSLDSGYVFDPFL-------LDI-SITPQSVKEALADKDYAKALMMS 315 (703)
Q Consensus 257 l~~spdg~~l~s~s------------~Dg-v~iwd~~~~~~~~~~~-------~~~-~~spd~~~~~l~sg~~~~~l~la 315 (703)
..|+|++..+++++ .++ |++||..+++....+. .++ +|+|++ .+|++++ ++.+++
T Consensus 350 ~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~i~iwd~~~g~~~~~l~~~~~~~v~s~~~fspdg--~~lasg~-d~~i~i- 425 (435)
T 4e54_B 350 AAWHPRYNLIVVGRYPDPNFKSCTPYELRTIDVFDGNSGKMMCQLYDPESSGISSLNEFNPMG--DTLASAM-GYHILI- 425 (435)
T ss_dssp CEECSSSSCEEEECCCCTTSCCSSTTCCCCEEEECSSSCCEEEEECCSSCCCCCCEEEECTTS--SCEEEEC-SSEEEE-
T ss_pred EEEcCCCCEEEEEEcCCCCeEEEEecCCCEEEEEECCCCcEEEEEeCCCCCcEEEEEEECCCC--CEEEEEc-CCcEEE-
Confidence 56777777766654 234 9999999988754432 333 699999 7888876 678888
Q ss_pred EecCchh
Q psy7108 316 LKLNEQG 322 (703)
Q Consensus 316 ~~l~~~~ 322 (703)
|++.+.+
T Consensus 426 W~~~~gk 432 (435)
T 4e54_B 426 WSQQEAR 432 (435)
T ss_dssp CCCC---
T ss_pred EECCcCe
Confidence 9987653
No 118
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.91 E-value=1.2e-23 Score=229.99 Aligned_cols=235 Identities=11% Similarity=0.065 Sum_probs=175.1
Q ss_pred CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe
Q psy7108 35 ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ 114 (703)
Q Consensus 35 g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~ 114 (703)
++.. +.+.+|...|.+++|+| +| .++++.+|+.+.. ... ...|...|.+++|||||+.||+++.||.
T Consensus 42 ~~~~--~~l~gh~~~v~~V~FsP--dg-------~~~~~~~~~~~~~-~~~-~~~~~~~V~~vawSPdG~~LAs~s~dg~ 108 (588)
T 2j04_A 42 PKYA--KDINCNSKNLFHVKEFP--LE-------FENKLDFELAQQN-GLL-NSQPVCYPRVCKPSPIDDWMAVLSNNGN 108 (588)
T ss_dssp ECCC--SCCSSBGGGTEEEEEEC--CC-------CCCTTTTSCCCSS-CSS-TTSCSCCEEEEEECSSSSCEEEEETTSC
T ss_pred cccc--ceecCCCccEEEEEECC--CC-------CcceEEEEeCCCc-eEe-ecCCCCcEEEEEECCCCCEEEEEeCCCc
Confidence 4444 55577888888888888 66 4555555543221 111 2245788999999999999999999999
Q ss_pred EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-------
Q psy7108 115 LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL------- 187 (703)
Q Consensus 115 I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~------- 187 (703)
|++||.++ .+..+. |.... ....+.+++|||||++|++|+.||+|++||+.++..
T Consensus 109 V~iwd~~~--~l~~l~-~~~~~---------------~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~ 170 (588)
T 2j04_A 109 VSVFKDNK--MLTNLD-SKGNL---------------SSRTYHCFEWNPIESSIVVGNEDGELQFFSIRKNSENTPEFYF 170 (588)
T ss_dssp EEEEETTE--EEEECC-CSSCS---------------TTTCEEEEEECSSSSCEEEEETTSEEEEEECCCCTTTCCCCEE
T ss_pred EEEEeCCc--eeeecc-CCCcc---------------ccccEEEEEEcCCCCEEEEEcCCCEEEEEECCCCcccccccee
Confidence 99999644 555555 43200 022599999999999999999999999999998753
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc---eee-cCCccceEEEEEcCCC
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA---ARV-LKPEVRVFCVKFSPTG 263 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~---~~~-~~h~~~V~~l~~spdg 263 (703)
+.++..+. .+|...|.+++|+|+| +++++.+ +.+++||+.+++.. ..+ .+|...|.+++|+ |
T Consensus 171 l~ti~~~~----~gh~~~V~sVawSPdg--Laass~D------~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs--g 236 (588)
T 2j04_A 171 ESSIRLSD----AGSKDWVTHIVWYEDV--LVAALSN------NSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV--D 236 (588)
T ss_dssp EEEEECSC----TTCCCCEEEEEEETTE--EEEEETT------CCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE--T
T ss_pred eeeeeccc----ccccccEEEEEEcCCc--EEEEeCC------CeEEEEECCCCccccceeeecccccCcEEEEEEE--C
Confidence 45554333 2466799999999999 5555544 48999999887743 345 4788899999999 6
Q ss_pred CEEEEEeCCC-EEEEEcCCCce-ecc-----eeeeEEE--ccchhhhHhhcCCcceEEEEEEecC
Q psy7108 264 QAWVAATTEG-VHIYSLDSGYV-FDP-----FLLDISI--TPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 264 ~~l~s~s~Dg-v~iwd~~~~~~-~~~-----~~~~~~~--spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
+.+|+++ ++ |++|++.+++. ... ...++++ +|++ ..++.+..+++ ++ |..+
T Consensus 237 ~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~--~~La~a~edG~-kl-w~~d 296 (588)
T 2j04_A 237 YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKES--TILLMSNKTSY-KV-LLED 296 (588)
T ss_dssp TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSC--EEEEECSSCEE-EE-EESS
T ss_pred CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCC--CEEEEEcCCCC-EE-Eeec
Confidence 8999998 57 99999988776 222 2467899 9999 77888888898 77 7776
No 119
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.91 E-value=4.5e-23 Score=218.61 Aligned_cols=241 Identities=13% Similarity=0.094 Sum_probs=182.9
Q ss_pred ceeeccC--CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEE--ecCC
Q psy7108 28 VKKGDMA--ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAY--KPDG 103 (703)
Q Consensus 28 v~~~d~t--g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~--spdg 103 (703)
+++|+.. ++.+ ...+.+|.+.|++++|+| ++++|++|+.||.|++||+.+++ ......|...|.+++| +|++
T Consensus 66 i~iw~~~~~~~~~-~~~~~~h~~~v~~~~~~~--~~~~l~s~~~dg~v~iwd~~~~~-~~~~~~~~~~v~~~~~~~~~~~ 141 (368)
T 3mmy_A 66 VRCWEVQDSGQTI-PKAQQMHTGPVLDVCWSD--DGSKVFTASCDKTAKMWDLSSNQ-AIQIAQHDAPVKTIHWIKAPNY 141 (368)
T ss_dssp EEEEEECTTSCEE-EEEEEECSSCEEEEEECT--TSSEEEEEETTSEEEEEETTTTE-EEEEEECSSCEEEEEEEECSSC
T ss_pred EEEEEcCCCCcee-EEEeccccCCEEEEEECc--CCCEEEEEcCCCcEEEEEcCCCC-ceeeccccCceEEEEEEeCCCC
Confidence 5566633 3332 267889999999999999 99999999999999999998875 4557789999999999 8999
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC---------------------CCCccchhhcccCCccEEEEEEc
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR---------------------LDTDLVTREQSLKAKAVSTVCYS 162 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~---------------------~~~~~~~~~~~~~~~~V~~i~~s 162 (703)
++|++++.|+.|++||+++++.+..+..+....... ............+...+.++++.
T Consensus 142 ~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 221 (368)
T 3mmy_A 142 SCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIF 221 (368)
T ss_dssp EEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEE
T ss_pred CEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEc
Confidence 999999999999999999988777776543211000 00000011111223455666666
Q ss_pred CCCCE----EEEEecCCcEEEEECCCC---ceEEEEEeccC----CccccccccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108 163 ADGSC----ILAAGQSKYICIYSSREG---ILLKKFTITQN----KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNV 231 (703)
Q Consensus 163 pdg~~----l~s~s~dg~I~lwD~~~~---~~~~~~~~~~~----~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~ 231 (703)
++... +++++.|+.|++||++.. .....+..+.. ....++...|.+++|+|+++++++++.++
T Consensus 222 ~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg------ 295 (368)
T 3mmy_A 222 KDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDG------ 295 (368)
T ss_dssp ECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTS------
T ss_pred ccCCCCCCeEEEecCCCcEEEEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCC------
Confidence 55544 999999999999999987 45556654432 11223334799999999999999888764
Q ss_pred EEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108 232 VLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS 278 (703)
Q Consensus 232 ~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd 278 (703)
.|++||+.+++++..+..|...|.+++|+|+|++|++++.|+ .+.|+
T Consensus 296 ~i~iwd~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~d~~~~~~~ 343 (368)
T 3mmy_A 296 RFSFWDKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHE 343 (368)
T ss_dssp CEEEEETTTTEEEEECCCCSSCEEEEEECTTSSCEEEEECCCSTTCGG
T ss_pred eEEEEECCCCcEEEEecCCCCCceEEEECCCCCeEEEEeccccccccc
Confidence 799999999999999999999999999999999999999987 44443
No 120
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=1.7e-22 Score=221.08 Aligned_cols=209 Identities=14% Similarity=0.232 Sum_probs=177.1
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCcee---EEEecCCCcEEEEEEecCC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQ---HETIQLLSDALCVAYKPDG 103 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~---~~~~~~~~~V~~v~~spdg 103 (703)
+++|| .+++++ ..+.+|.+.|.+++|++ +.+++|+.||+|++||+.++... .....|...|.+++| ++
T Consensus 195 i~vwd~~~~~~~--~~~~~h~~~v~~l~~~~----~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~--~~ 266 (435)
T 1p22_A 195 VRVWDVNTGEML--NTLIHHCEAVLHLRFNN----GMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDF--DD 266 (435)
T ss_dssp EEEEESSSCCEE--EEECCCCSCEEEEECCT----TEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEE--ET
T ss_pred EEEEECCCCcEE--EEEcCCCCcEEEEEEcC----CEEEEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEe--CC
Confidence 66677 578888 89999999999999976 59999999999999999877654 455679999999999 68
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~ 183 (703)
+.+++|+.||.|++||+++++.+..+.+|.. .|.+++|+ ++.+++|+.|+.|++||++
T Consensus 267 ~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~--------------------~v~~~~~~--~~~l~~g~~dg~i~iwd~~ 324 (435)
T 1p22_A 267 KYIVSASGDRTIKVWNTSTCEFVRTLNGHKR--------------------GIACLQYR--DRLVVSGSSDNTIRLWDIE 324 (435)
T ss_dssp TEEEEEETTSEEEEEETTTCCEEEEEECCSS--------------------CEEEEEEE--TTEEEEEETTSCEEEEETT
T ss_pred CEEEEEeCCCeEEEEECCcCcEEEEEcCCCC--------------------cEEEEEeC--CCEEEEEeCCCeEEEEECC
Confidence 8999999999999999999999999988765 79999884 7899999999999999999
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc---------cceeecCCccce
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD---------MAARVLKPEVRV 254 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~---------~~~~~~~h~~~V 254 (703)
+++++..+..+. ..|.++++ ++..+++++.++ .|++||+.+++ +...+.+|...|
T Consensus 325 ~~~~~~~~~~h~--------~~v~~~~~--~~~~l~sg~~dg------~i~vwd~~~~~~~~~~~~~~~~~~~~~h~~~v 388 (435)
T 1p22_A 325 CGACLRVLEGHE--------ELVRCIRF--DNKRIVSGAYDG------KIKVWDLVAALDPRAPAGTLCLRTLVEHSGRV 388 (435)
T ss_dssp TCCEEEEECCCS--------SCEEEEEC--CSSEEEEEETTS------CEEEEEHHHHTSTTSCTTTTEEEEECCCSSCC
T ss_pred CCCEEEEEeCCc--------CcEEEEEe--cCCEEEEEeCCC------cEEEEECCCCCCccccccchheeeccCCCCCe
Confidence 999988876544 47888888 788888887764 89999988765 677788999999
Q ss_pred EEEEEcCCCCEEEEEeCCC-EEEEEcCCCce
Q psy7108 255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYV 284 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~ 284 (703)
.+++| +++.|++++.|| |++||+.+...
T Consensus 389 ~~l~~--~~~~l~s~s~Dg~i~iwd~~~~~~ 417 (435)
T 1p22_A 389 FRLQF--DEFQIVSSSHDDTILIWDFLNDPA 417 (435)
T ss_dssp CCEEE--CSSCEEECCSSSEEEEEC------
T ss_pred EEEEe--CCCEEEEEeCCCEEEEEECCCCCC
Confidence 99999 788999999999 99999987654
No 121
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.3e-22 Score=235.71 Aligned_cols=216 Identities=13% Similarity=0.089 Sum_probs=170.6
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc------------------------------------------
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD------------------------------------------ 82 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~------------------------------------------ 82 (703)
+|...|++++|+| ++++||+|+.||+|+||++.+++
T Consensus 486 ~h~~~V~svafsp--dg~~LAsgs~DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (902)
T 2oaj_A 486 AKELAVDKISFAA--ETLELAVSIETGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQ 563 (902)
T ss_dssp SSSCCEEEEEEET--TTTEEEEEETTSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSE
T ss_pred CCCCceeEEEecC--CCCeEEEEecCcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCC
Confidence 8999999999999 99999999999999999997652
Q ss_pred ---eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhc-ccCCccEEE
Q psy7108 83 ---TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQ-SLKAKAVST 158 (703)
Q Consensus 83 ---~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~ 158 (703)
+...+..|.+.|++++|+||| +||+|+.|++|++||++++..+...... .. .+|...|++
T Consensus 564 g~~~~~~l~~h~~~V~svafSpdG-~lAsgs~D~tv~lwd~~~~~~~~~~~~~---------------~~~~gh~~~V~s 627 (902)
T 2oaj_A 564 GFMPSTAVHANKGKTSAINNSNIG-FVGIAYAAGSLMLIDRRGPAIIYMENIR---------------EISGAQSACVTC 627 (902)
T ss_dssp EEEEEEEECCCSCSEEEEEECBTS-EEEEEETTSEEEEEETTTTEEEEEEEGG---------------GTCSSCCCCEEE
T ss_pred ccceeEEEEcCCCcEEEEEecCCc-EEEEEeCCCcEEEEECCCCeEEEEeehh---------------HhccccccceEE
Confidence 133445599999999999999 9999999999999999887765432211 11 145668999
Q ss_pred EEEc-----CCC---CEEEEEecCCcEEEEEC---CCCceEEEEEeccCCccccccccceeee-ec--------------
Q psy7108 159 VCYS-----ADG---SCILAAGQSKYICIYSS---REGILLKKFTITQNKSLDGINDFINRRK-MT-------------- 212 (703)
Q Consensus 159 i~~s-----pdg---~~l~s~s~dg~I~lwD~---~~~~~~~~~~~~~~~~~~~~~~~v~~~~-~s-------------- 212 (703)
++|+ ||| ++|++|+.|++|++||+ .+|++...+.++.... +...|.+++ |+
T Consensus 628 v~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~---~~~~v~~i~~~~~~~~~~~~a~~~~~ 704 (902)
T 2oaj_A 628 IEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVT---SKGPIHKIDAFSKETKSSCLATIPKM 704 (902)
T ss_dssp EEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECC---SSCCCCEEEEEETTTCCBCBCBHHHH
T ss_pred EEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecC---CCCceEEEEeEecCCCCcccCCHHHH
Confidence 9999 885 89999999999999999 7888888887764211 122444444 43
Q ss_pred --------cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEE---E------EcCCCCEEEEEeCCC-E
Q psy7108 213 --------EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCV---K------FSPTGQAWVAATTEG-V 274 (703)
Q Consensus 213 --------pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l---~------~spdg~~l~s~s~Dg-v 274 (703)
+++..+++ + + ..+++|++.++++.++...|...+.++ . |++++..|++++.|| |
T Consensus 705 ~~l~~~~~~~~~~l~~-~-~------~~ir~~~~~~~k~~~k~~~~~~~~~~v~~~~~~~~~~~~~~~~~l~~~~~~g~i 776 (902)
T 2oaj_A 705 QNLSKGLCIPGIVLIT-G-F------DDIRLITLGKSKSTHKGFKYPLAATGLSYISTVEKNNDRKNLTVIITLEINGHL 776 (902)
T ss_dssp HGGGGTCCCCEEEEEE-C-S------SEEEEECTTCCCEEEEECSSCEEEEEEEEEEEECSSSCEEEEEEEEEEETTSEE
T ss_pred hccCCCCCCCeEEEEE-e-c------cceEEEeCccccceeeEcccceeeeEEEEEEeccccccccCceEEEEEeCCCcE
Confidence 34443333 3 2 279999999999888887777777776 5 788999999999999 9
Q ss_pred EEEEcCCCceeccee
Q psy7108 275 HIYSLDSGYVFDPFL 289 (703)
Q Consensus 275 ~iwd~~~~~~~~~~~ 289 (703)
++|++.+.+++....
T Consensus 777 ~~~s~p~l~~~~~~~ 791 (902)
T 2oaj_A 777 RVFTIPDFKEQMSEH 791 (902)
T ss_dssp EEEETTTCCEEEEEE
T ss_pred EEEECcchHHHhhcc
Confidence 999999999876554
No 122
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.89 E-value=3.2e-21 Score=200.37 Aligned_cols=220 Identities=13% Similarity=0.096 Sum_probs=176.9
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-eEEEecCCCcEEEEEEecCCCE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-QHETIQLLSDALCVAYKPDGTE 105 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-~~~~~~~~~~V~~v~~spdg~~ 105 (703)
+++|+ .+++++ +.+.+|...+.++.+. +..+++|+.++.+++|+...... ......|...+.+++++++++.
T Consensus 91 v~iw~~~~~~~~--~~~~~h~~~~~~~~~~----~~~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (318)
T 4ggc_A 91 VQLWDVQQQKRL--RNMTSHSARVGSLSWN----SYILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRH 164 (318)
T ss_dssp EEEEETTTTEEE--EEEECCSSCEEEEEEE----TTEEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSE
T ss_pred EEEeecCCceeE--EEecCccceEEEeecC----CCEEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCE
Confidence 56676 578888 8999999999877664 58999999999999999887654 4555679999999999999999
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE---EEEecCCcEEEEEC
Q psy7108 106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI---LAAGQSKYICIYSS 182 (703)
Q Consensus 106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l---~s~s~dg~I~lwD~ 182 (703)
+++++.|+.|++||+++++...... .....+.+.|.+++++|++..+ ++++.+++|++||.
T Consensus 165 l~s~~~d~~i~iwd~~~~~~~~~~~----------------~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lwd~ 228 (318)
T 4ggc_A 165 LASGGNDNLVNVWPSAPGEGGWVPL----------------QTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNV 228 (318)
T ss_dssp EEEEETTSCEEEEESSCBTTBSCCS----------------EEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEEET
T ss_pred EEEEecCcceeEEECCCCcccccce----------------eeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEEec
Confidence 9999999999999998765321110 0111234479999999976543 35667899999999
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd 262 (703)
+......... +...+..+.++|++..+++++... +..|++||+++++++..+.+|...|++++|+||
T Consensus 229 ~~~~~~~~~~---------~~~~v~~~~~~~~~~~~~~~sg~~----d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spd 295 (318)
T 4ggc_A 229 CSGACLSAVD---------AHSQVCSILWSPHYKELISGHGFA----QNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPD 295 (318)
T ss_dssp TTCCEEEEEE---------CSSCEEEEEEETTTTEEEEEECTT----TCCEEEEETTTCCEEEEECCCSSCEEEEEECTT
T ss_pred cccccccccc---------ceeeeeeeeecccccceEEEEEcC----CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCC
Confidence 9887766544 223678899999999888765321 137999999999999999999999999999999
Q ss_pred CCEEEEEeCCC-EEEEEcCCC
Q psy7108 263 GQAWVAATTEG-VHIYSLDSG 282 (703)
Q Consensus 263 g~~l~s~s~Dg-v~iwd~~~~ 282 (703)
|++|++|+.|+ |+|||+...
T Consensus 296 g~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 296 GATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp SSCEEEEETTTEEEEECCSCC
T ss_pred CCEEEEEecCCeEEEEECCCC
Confidence 99999999999 999998654
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.88 E-value=1.4e-20 Score=202.28 Aligned_cols=221 Identities=14% Similarity=0.192 Sum_probs=178.2
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~ 105 (703)
+++|| .+++++ ..+..|. .+.+++|+| ++++|+ +++.|+.|++||+.+++.. ....+...+.+++|+|+++.
T Consensus 56 i~v~d~~~~~~~--~~~~~~~-~v~~~~~sp--dg~~l~~~~~~~~~v~v~d~~~~~~~-~~~~~~~~~~~~~~s~dg~~ 129 (391)
T 1l0q_A 56 VSIIDTATNNVI--ATVPAGS-SPQGVAVSP--DGKQVYVTNMASSTLSVIDTTSNTVA-GTVKTGKSPLGLALSPDGKK 129 (391)
T ss_dssp EEEEETTTTEEE--EEEECSS-SEEEEEECT--TSSEEEEEETTTTEEEEEETTTTEEE-EEEECSSSEEEEEECTTSSE
T ss_pred EEEEECCCCeEE--EEEECCC-CccceEECC--CCCEEEEEECCCCEEEEEECCCCeEE-EEEeCCCCcceEEECCCCCE
Confidence 66777 477777 7776655 899999999 999775 5557799999999887544 44455668999999999998
Q ss_pred E-EEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEecCCcEEEEECC
Q psy7108 106 I-VVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAGQSKYICIYSSR 183 (703)
Q Consensus 106 l-as~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s~dg~I~lwD~~ 183 (703)
+ ++++.|+.|++||+.+++....+..+. .+.+++|+|+++.+ ++++.++.|++||++
T Consensus 130 l~~~~~~~~~v~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~ 188 (391)
T 1l0q_A 130 LYVTNNGDKTVSVINTVTKAVINTVSVGR---------------------SPKGIAVTPDGTKVYVANFDSMSISVIDTV 188 (391)
T ss_dssp EEEEETTTTEEEEEETTTTEEEEEEECCS---------------------SEEEEEECTTSSEEEEEETTTTEEEEEETT
T ss_pred EEEEeCCCCEEEEEECCCCcEEEEEecCC---------------------CcceEEECCCCCEEEEEeCCCCEEEEEECC
Confidence 7 677779999999999999888877654 57899999999988 566788999999999
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG 263 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg 263 (703)
+++....+.. ...+.+++|+|+|+.+++++.+. .+..|++||+.+++....+..+. .+.+++|+|+|
T Consensus 189 ~~~~~~~~~~---------~~~~~~~~~~~~g~~l~~~~~~~---~~~~v~~~d~~~~~~~~~~~~~~-~~~~~~~s~dg 255 (391)
T 1l0q_A 189 TNSVIDTVKV---------EAAPSGIAVNPEGTKAYVTNVDK---YFNTVSMIDTGTNKITARIPVGP-DPAGIAVTPDG 255 (391)
T ss_dssp TTEEEEEEEC---------SSEEEEEEECTTSSEEEEEEECS---SCCEEEEEETTTTEEEEEEECCS-SEEEEEECTTS
T ss_pred CCeEEEEEec---------CCCccceEECCCCCEEEEEecCc---CCCcEEEEECCCCeEEEEEecCC-CccEEEEccCC
Confidence 9988776652 23678899999999988877421 12489999999998877777654 57899999999
Q ss_pred CEE-EEEeCCC-EEEEEcCCCceecce
Q psy7108 264 QAW-VAATTEG-VHIYSLDSGYVFDPF 288 (703)
Q Consensus 264 ~~l-~s~s~Dg-v~iwd~~~~~~~~~~ 288 (703)
+++ ++++.|+ |++||+.+++....+
T Consensus 256 ~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 256 KKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 988 5667788 999999998775543
No 124
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.87 E-value=2e-20 Score=203.43 Aligned_cols=231 Identities=12% Similarity=0.178 Sum_probs=177.4
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC---cEEEEEcCCCceeEEEecCCCcEEEEEEecCCC
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK---TVKLWNAVETDTQHETIQLLSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg---~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~ 104 (703)
+.+||.++... +.+.+|.+.|.+++|+| +|+.|++++.|+ .|++||+.+++. ..+..+...+.+++|+|||+
T Consensus 161 i~i~d~~g~~~--~~l~~~~~~v~~~~~Sp--dg~~la~~s~~~~~~~i~~~d~~tg~~-~~l~~~~~~~~~~~~spdg~ 235 (415)
T 2hqs_A 161 LRVSDYDGYNQ--FVVHRSPQPLMSPAWSP--DGSKLAYVTFESGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGS 235 (415)
T ss_dssp EEEEETTSCSC--EEEEEESSCEEEEEECT--TSSEEEEEECTTSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSS
T ss_pred EEEEcCCCCCC--EEEeCCCCcceeeEEcC--CCCEEEEEEecCCCcEEEEEECCCCcE-EEeecCCCcccCEEEcCCCC
Confidence 45666667777 88999999999999999 999999999885 999999988754 45667888999999999999
Q ss_pred EEE-EEECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CC--cEE
Q psy7108 105 EIV-VATLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SK--YIC 178 (703)
Q Consensus 105 ~la-s~s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg--~I~ 178 (703)
.|+ +++.|+ .|++||+++++. ..+..+. ..+.+++|+|||+.|++++. ++ .|+
T Consensus 236 ~la~~~~~~g~~~i~~~d~~~~~~-~~l~~~~--------------------~~~~~~~~spdg~~l~~~s~~~g~~~i~ 294 (415)
T 2hqs_A 236 KLAFALSKTGSLNLYVMDLASGQI-RQVTDGR--------------------SNNTEPTWFPDSQNLAFTSDQAGRPQVY 294 (415)
T ss_dssp EEEEEECTTSSCEEEEEETTTCCE-EECCCCS--------------------SCEEEEEECTTSSEEEEEECTTSSCEEE
T ss_pred EEEEEEecCCCceEEEEECCCCCE-EeCcCCC--------------------CcccceEECCCCCEEEEEECCCCCcEEE
Confidence 888 555555 499999998875 3444433 27899999999999998876 44 688
Q ss_pred EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEE
Q psy7108 179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVK 258 (703)
Q Consensus 179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~ 258 (703)
+||+.+++.. .+.. +...+.+++|+|+|+++++++.++ +...|.+||+.+++.. .+..+. .+.+++
T Consensus 295 ~~d~~~~~~~-~l~~--------~~~~~~~~~~spdG~~l~~~~~~~---g~~~i~~~d~~~~~~~-~l~~~~-~~~~~~ 360 (415)
T 2hqs_A 295 KVNINGGAPQ-RITW--------EGSQNQDADVSSDGKFMVMVSSNG---GQQHIAKQDLATGGVQ-VLSSTF-LDETPS 360 (415)
T ss_dssp EEETTSSCCE-ECCC--------SSSEEEEEEECTTSSEEEEEEECS---SCEEEEEEETTTCCEE-ECCCSS-SCEEEE
T ss_pred EEECCCCCEE-EEec--------CCCcccCeEECCCCCEEEEEECcC---CceEEEEEECCCCCEE-EecCCC-CcCCeE
Confidence 8899887643 2221 223678899999999998877642 2358999999988764 444454 899999
Q ss_pred EcCCCCEEEEEeCCC----EEEEEcCCCcee-----cceeeeEEEccch
Q psy7108 259 FSPTGQAWVAATTEG----VHIYSLDSGYVF-----DPFLLDISITPQS 298 (703)
Q Consensus 259 ~spdg~~l~s~s~Dg----v~iwd~~~~~~~-----~~~~~~~~~spd~ 298 (703)
|+|||+.|++++.++ |.+|+++++... .....+++|+|..
T Consensus 361 ~spdg~~l~~~s~~~~~~~l~~~d~~g~~~~~l~~~~~~v~~~~~~~~~ 409 (415)
T 2hqs_A 361 LAPNGTMVIYSSSQGMGSVLNLVSTDGRFKARLPATDGQVKFPAWSPYL 409 (415)
T ss_dssp ECTTSSEEEEEEEETTEEEEEEEETTSCCEEECCCSSSEEEEEEECCCC
T ss_pred EcCCCCEEEEEEcCCCccEEEEEECCCCcEEEeeCCCCCCcCCcccccc
Confidence 999999998877654 788998755432 1224667888754
No 125
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.87 E-value=1.4e-20 Score=193.70 Aligned_cols=254 Identities=13% Similarity=0.110 Sum_probs=165.9
Q ss_pred eEEEEEcCCCCCC---EEEEEeCCCcEEEEEcCCC---ceeEEEecCCC-------------------------cEEEEE
Q psy7108 50 VSCIEFSPVLSST---GMVSASWDKTVKLWNAVET---DTQHETIQLLS-------------------------DALCVA 98 (703)
Q Consensus 50 V~~l~~sp~~dg~---~L~sgs~Dg~V~iWd~~~~---~~~~~~~~~~~-------------------------~V~~v~ 98 (703)
+.++-|-. .+- .+++++. .+|++|+..+. +.......|+. .|.+++
T Consensus 42 ~~~~~~~~--~~~~~~~~~~~~~-~~v~lw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~v~sla 118 (356)
T 2w18_A 42 VSAMFWER--AGCKEPCIITACE-DVVSLWKALDAWQWEKLYTWHFAEVPVLQIVPVPDVYNLVCVALGNLEIREIRALF 118 (356)
T ss_dssp EEEEEEC------CEEEEEEEES-SEEEEEEESSSSBEEEEEEEECCSSCEEEECCCTTCCSCEEEEECSSSEEEEEEEC
T ss_pred Eeeeeecc--CCCCccEEEEecc-ceEEEcccCCCccceeeEEEeccCceeEEEEEcCcccceeeeeeccccccceEEEE
Confidence 56666654 333 5677776 58999999887 33333333332 567788
Q ss_pred EecC----CCEEEEEECCCeEEEEEcCCCcEEEEE-eccccCCCCC--CCCccchhhcccCCccEEEEEEcC---CCCEE
Q psy7108 99 YKPD----GTEIVVATLDGQLIMFDVESAAQVGSV-EARRDLDSGR--LDTDLVTREQSLKAKAVSTVCYSA---DGSCI 168 (703)
Q Consensus 99 ~spd----g~~las~s~dg~I~vwd~~~~~~~~~~-~~~~~~~~~~--~~~~~~~~~~~~~~~~V~~i~~sp---dg~~l 168 (703)
++|| ++.+++++. .+.+|++.+++.+.+. .+|......- ............|...++.++|+| ++..|
T Consensus 119 ~spd~~~~~~~l~s~g~--~~~v~~l~~g~lv~ss~~g~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~L 196 (356)
T 2w18_A 119 CSSDDESEKQVLLKSGN--IKAVLGLTKRRLVSSSGTLSDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEAL 196 (356)
T ss_dssp C------CCEEEEEEEE--EEEEEEETTTEEEEEESSSTTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEE
T ss_pred ECCCccccccEEEeCCC--eEEEEecCCCcEEEecccCCCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceE
Confidence 8888 888888764 2555666555554442 2222100000 000011112223445777888888 77999
Q ss_pred EEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC------CCCCeeEEECCCCCCCc
Q psy7108 169 LAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET------HEGGNVVLKLPGVKKGD 242 (703)
Q Consensus 169 ~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~------~~~~~~~i~iwd~~~~~ 242 (703)
++++.|++|++||++++++++++..+.. +...+.+++|+|+|+.+++.+.+. ....+.++++||..+++
T Consensus 197 aSgS~D~TIkIWDl~TGk~l~tL~g~~~-----~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk 271 (356)
T 2w18_A 197 LGTTIMNNIVIWNLKTGQLLKKMHIDDS-----YQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTL 271 (356)
T ss_dssp EEEETTSEEEEEETTTCCEEEEEECCC--------CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTTTE
T ss_pred EEecCCCcEEEEECCCCcEEEEEcCCCc-----ceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCE
Confidence 9999999999999999999999975433 123677789999999886544210 01234799999999998
Q ss_pred cceee-----cCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------e-eEEEccchhhhHhhcCCcc
Q psy7108 243 MAARV-----LKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------L-DISITPQSVKEALADKDYA 309 (703)
Q Consensus 243 ~~~~~-----~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------~-~~~~spd~~~~~l~sg~~~ 309 (703)
.+..+ .+|...+.+..++ +..+++++.|+ |+|||+.++++...+. . .++|+||+ .+|++|+.|
T Consensus 272 ~l~v~~~~~p~Gh~~~~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG--~~LaSGS~D 347 (356)
T 2w18_A 272 SVGVMLYCLPPGQAGRFLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTD--SHLLAGQKD 347 (356)
T ss_dssp EEEEEEECCCTTCCCCEEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSS--SEEEEECTT
T ss_pred EEEEEEeeccCCCcceeEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCC--CEEEEEECC
Confidence 76544 3566555544444 78899999999 9999999998766543 2 47999999 889999999
Q ss_pred eEEEEEEec
Q psy7108 310 KALMMSLKL 318 (703)
Q Consensus 310 ~~l~la~~l 318 (703)
+++++ |+.
T Consensus 348 ~TIkl-Wd~ 355 (356)
T 2w18_A 348 GNIFV-YHY 355 (356)
T ss_dssp SCEEE-EEE
T ss_pred CcEEE-ecC
Confidence 99998 874
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.86 E-value=1.2e-20 Score=205.30 Aligned_cols=256 Identities=13% Similarity=0.099 Sum_probs=189.2
Q ss_pred EEecCCc--eeeccCCCccccccccCCCcCeEEEEEcCC------------CCCCEEEEEeCC------CcEEEEEcCCC
Q psy7108 22 VLKLPGV--KKGDMAARVLKPEVLSGHEGPVSCIEFSPV------------LSSTGMVSASWD------KTVKLWNAVET 81 (703)
Q Consensus 22 ~i~~~~v--~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~------------~dg~~L~sgs~D------g~V~iWd~~~~ 81 (703)
.+++|++ . +|+++....+.+|...+..+++++. ..+..++.++.+ ++|++||+..
T Consensus 94 ~i~lwd~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~g~~~~~~~~l~~~s~~~~~~~~~~i~i~d~~g- 168 (415)
T 2hqs_A 94 AYQLVDTGGA----PGTVLAQNSYKVNKQWLRYAGHTASDEVFEKLTGIKGAFRTRIAYVVQTNGGQFPYELRVSDYDG- 168 (415)
T ss_dssp EEEEEECSSS----TTCEEEEEEEEECGGGHHHHHHHHHHHHHHHHHSSCCCTTCEEEEEEECSSSSCCEEEEEEETTS-
T ss_pred EEEEEeCCCC----CCCEEeeeEEEcChhHHHHHHHHHHHHHHHHHcCCCCcCCCEEEEEEecCCCCccceEEEEcCCC-
Confidence 4566655 3 6665523458899988888887741 016778777664 7999999974
Q ss_pred ceeEEEecCCCcEEEEEEecCCCEEEEEECCC---eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEE
Q psy7108 82 DTQHETIQLLSDALCVAYKPDGTEIVVATLDG---QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVST 158 (703)
Q Consensus 82 ~~~~~~~~~~~~V~~v~~spdg~~las~s~dg---~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~ 158 (703)
.....+..|...+.+++|+|||+.|++++.++ .|++||+++++... +..+.. .+.+
T Consensus 169 ~~~~~l~~~~~~v~~~~~Spdg~~la~~s~~~~~~~i~~~d~~tg~~~~-l~~~~~--------------------~~~~ 227 (415)
T 2hqs_A 169 YNQFVVHRSPQPLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQ-VASFPR--------------------HNGA 227 (415)
T ss_dssp CSCEEEEEESSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCCEEE-EECCSS--------------------CEEE
T ss_pred CCCEEEeCCCCcceeeEEcCCCCEEEEEEecCCCcEEEEEECCCCcEEE-eecCCC--------------------cccC
Confidence 45677778999999999999999999999885 99999999988753 444332 7899
Q ss_pred EEEcCCCCEEE-EEecCCc--EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108 159 VCYSADGSCIL-AAGQSKY--ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL 235 (703)
Q Consensus 159 i~~spdg~~l~-s~s~dg~--I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i 235 (703)
++|+|||+.|+ +++.++. |++||+++++. ..+.. +...+.+++|+|||+.+++++..+ +...|.+
T Consensus 228 ~~~spdg~~la~~~~~~g~~~i~~~d~~~~~~-~~l~~--------~~~~~~~~~~spdg~~l~~~s~~~---g~~~i~~ 295 (415)
T 2hqs_A 228 PAFSPDGSKLAFALSKTGSLNLYVMDLASGQI-RQVTD--------GRSNNTEPTWFPDSQNLAFTSDQA---GRPQVYK 295 (415)
T ss_dssp EEECTTSSEEEEEECTTSSCEEEEEETTTCCE-EECCC--------CSSCEEEEEECTTSSEEEEEECTT---SSCEEEE
T ss_pred EEEcCCCCEEEEEEecCCCceEEEEECCCCCE-EeCcC--------CCCcccceEECCCCCEEEEEECCC---CCcEEEE
Confidence 99999999888 5665554 99999998865 33322 334788999999999988877532 2247888
Q ss_pred CCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC---C-EEEEEcCCCceecc----eeeeEEEccchhhhHhhcCC
Q psy7108 236 PGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE---G-VHIYSLDSGYVFDP----FLLDISITPQSVKEALADKD 307 (703)
Q Consensus 236 wd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D---g-v~iwd~~~~~~~~~----~~~~~~~spd~~~~~l~sg~ 307 (703)
||+.+++. ..+..+...+.+++|+|||++|++++.+ . |.+|++.+++.... ....++|+|++ ..++.++
T Consensus 296 ~d~~~~~~-~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~~l~~~~~~~~~~~spdg--~~l~~~s 372 (415)
T 2hqs_A 296 VNINGGAP-QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQVLSSTFLDETPSLAPNG--TMVIYSS 372 (415)
T ss_dssp EETTSSCC-EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEEECCCSSSCEEEEECTTS--SEEEEEE
T ss_pred EECCCCCE-EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEEEecCCCCcCCeEEcCCC--CEEEEEE
Confidence 89988764 3455566788999999999999888764 3 89999998766321 24578999999 5555555
Q ss_pred cce---EEEEEEecC
Q psy7108 308 YAK---ALMMSLKLN 319 (703)
Q Consensus 308 ~~~---~l~la~~l~ 319 (703)
.++ .+.+ |++.
T Consensus 373 ~~~~~~~l~~-~d~~ 386 (415)
T 2hqs_A 373 SQGMGSVLNL-VSTD 386 (415)
T ss_dssp EETTEEEEEE-EETT
T ss_pred cCCCccEEEE-EECC
Confidence 444 4544 6654
No 127
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.86 E-value=2.9e-22 Score=233.26 Aligned_cols=259 Identities=15% Similarity=0.187 Sum_probs=174.1
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-----CceeEEEecCCCc---------
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-----TDTQHETIQLLSD--------- 93 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-----~~~~~~~~~~~~~--------- 93 (703)
+.+||..+... ..+..|...+.+++|+| ||+.|+++ .|+.|++|++.+ ++.......+...
T Consensus 103 i~~~d~~~~~~--~~l~~~~~~~~~~~~Sp--dG~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ 177 (706)
T 2z3z_A 103 LVGFDMLARKV--TYLFDTNEETASLDFSP--VGDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQ 177 (706)
T ss_dssp EEEEETTTTEE--EEEECCTTCCTTCEECT--TSSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGG
T ss_pred EEEEECCCCce--EEccCCcccccCCcCCC--CCCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhh
Confidence 66677554444 56667788899999999 99999995 679999999987 6433222223332
Q ss_pred -----EEEEEEecCCCEEEEEE---------------------------------CCCeEEEEEcCCCcEEEEEeccccC
Q psy7108 94 -----ALCVAYKPDGTEIVVAT---------------------------------LDGQLIMFDVESAAQVGSVEARRDL 135 (703)
Q Consensus 94 -----V~~v~~spdg~~las~s---------------------------------~dg~I~vwd~~~~~~~~~~~~~~~~ 135 (703)
+.+++|+|||++|++++ .+..|++||+.+++........
T Consensus 178 ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~--- 254 (706)
T 2z3z_A 178 REFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGE--- 254 (706)
T ss_dssp GCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCS---
T ss_pred hhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCC---
Confidence 47899999999999987 3467999999988764433211
Q ss_pred CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108 136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTITQNKSLDGINDFINRRK 210 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (703)
.+...+.+++|+|||+.|++++.++ .|++||+.+++....+...... .....+.+++
T Consensus 255 ---------------~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~---~~~~~~~~~~ 316 (706)
T 2z3z_A 255 ---------------PKEKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK---HYVEPLHPLT 316 (706)
T ss_dssp ---------------CTTCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS---SCCCCCSCCE
T ss_pred ---------------CCceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC---CeECccCCce
Confidence 1234789999999999999987765 8999999998444433321110 1111346789
Q ss_pred ecc--CCCEEEEEcccCCCCCeeEEECCCCC-CCccceeecCCccceEE-EEEcCCCCEEEEEeCC-C-----EEEEEcC
Q psy7108 211 MTE--FGNVSLIETRETHEGGNVVLKLPGVK-KGDMAARVLKPEVRVFC-VKFSPTGQAWVAATTE-G-----VHIYSLD 280 (703)
Q Consensus 211 ~sp--dg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~~~~~~~h~~~V~~-l~~spdg~~l~s~s~D-g-----v~iwd~~ 280 (703)
|+| ||++++++..++ .+++|++. ++.....+..+...+.+ ++|+|||+.|+.++.+ + |..|++.
T Consensus 317 ~sp~~dg~~l~~~~~~g------~~~l~~~~~~~~~~~~l~~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~ 390 (706)
T 2z3z_A 317 FLPGSNNQFIWQSRRDG------WNHLYLYDTTGRLIRQVTKGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDIK 390 (706)
T ss_dssp ECTTCSSEEEEEECTTS------SCEEEEEETTSCEEEECCCSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEETT
T ss_pred eecCCCCEEEEEEccCC------ccEEEEEECCCCEEEecCCCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEcC
Confidence 999 999777665442 45566554 45566667777777877 7999999988655543 2 5566666
Q ss_pred CCceec----ceeeeEEEccchhhhHhhcC--Cc--ceEEEEEEecCch
Q psy7108 281 SGYVFD----PFLLDISITPQSVKEALADK--DY--AKALMMSLKLNEQ 321 (703)
Q Consensus 281 ~~~~~~----~~~~~~~~spd~~~~~l~sg--~~--~~~l~la~~l~~~ 321 (703)
++.... .....++|+|++ ..++.. +. ...+.+ |++...
T Consensus 391 ~~~~~~l~~~~~~~~~~~spdg--~~l~~~~~~~~~p~~i~l-~d~~~~ 436 (706)
T 2z3z_A 391 GGKTKDLTPESGMHRTQLSPDG--SAIIDIFQSPTVPRKVTV-TNIGKG 436 (706)
T ss_dssp CCCCEESCCSSSEEEEEECTTS--SEEEEEEECSSCSCEEEE-EESSSC
T ss_pred CCCceeccCCCceEEEEECCCC--CEEEEEecCCCCCcEEEE-EECCCC
Confidence 654321 123568999999 444322 11 134555 666544
No 128
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=4e-20 Score=196.73 Aligned_cols=252 Identities=11% Similarity=0.102 Sum_probs=167.2
Q ss_pred EeeecccCCceEEecCC-ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEE
Q psy7108 11 ETRETHEGGNVVLKLPG-VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHET 87 (703)
Q Consensus 11 ~~~~~~~~~~~~i~~~~-v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~ 87 (703)
...|..+|...+....+ +++|+. +++.. ...+...+..+++.+ +++.+ ++++.|++|++||..+++... .
T Consensus 24 ~v~fs~dg~~la~g~~~~~~iw~~~~~~~~----~~~~~~~~~~~~~~~--~~~~~~~~~~~d~~v~iWd~~~~~~~~-~ 96 (355)
T 3vu4_A 24 DYEFNQDQSCLILSTLKSFEIYNVHPVAHI----MSQEMRHLSKVRMLH--RTNYVAFVTGVKEVVHIWDDVKKQDVS-R 96 (355)
T ss_dssp EEEECTTSSEEEEECSSEEEEEEETTEEEE----EEEECSCCCEEEECT--TSSEEEEECSSTTEEEEEETTTTEEEE-E
T ss_pred EEEECCCCCEEEEEcCCEEEEEecCCccee----eeeecCCeEEEEEcC--CCCEEEEEECCccEEEEEECCCCcEEE-E
Confidence 34444444433333222 456663 33333 222333588899999 77777 567888999999998886554 4
Q ss_pred ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC-cEEEEEe-----------------cccc-------CCCCCC--
Q psy7108 88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA-AQVGSVE-----------------ARRD-------LDSGRL-- 140 (703)
Q Consensus 88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~-~~~~~~~-----------------~~~~-------~~~~~~-- 140 (703)
..+...|.+++|+++. ++++ .|+.|++||+.++ +.+..+. +..+ +..+..
T Consensus 97 ~~~~~~v~~v~~~~~~--~~~~-~~~~i~i~d~~~~~~~~~~~~~~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~ 173 (355)
T 3vu4_A 97 IKVDAPVKDLFLSREF--IVVS-YGDVISVFKFGNPWKRITDDIRFGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSAT 173 (355)
T ss_dssp EECSSCEEEEEECSSE--EEEE-ETTEEEEEESSTTCCBSSCCEEEEEEEEEETTEEEEEESSCTTCEEEEECCC-----
T ss_pred EECCCceEEEEEcCCE--EEEE-EcCEEEEEECCCCceeeEEeccCCceEEEEccEEEEeCCCcCcEEEEEECCCCCccc
Confidence 4577899999998764 3333 3677888887766 2211111 1100 000000
Q ss_pred --CCc------cc-hhhcccCCccEEEEEEcCCCCEEEEEecCCc-EEEEECCCCceEEEEEeccCCccccccccceeee
Q psy7108 141 --DTD------LV-TREQSLKAKAVSTVCYSADGSCILAAGQSKY-ICIYSSREGILLKKFTITQNKSLDGINDFINRRK 210 (703)
Q Consensus 141 --~~~------~~-~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~-I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 210 (703)
... .. ......|.+.|++++|+|+|++|++|+.|++ |++||+++++++..+... .|...|.+++
T Consensus 174 ~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g------~h~~~v~~~~ 247 (355)
T 3vu4_A 174 TQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRG------LDRADVVDMK 247 (355)
T ss_dssp -------------CCEEECCCSSCEEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECT------TCCSCEEEEE
T ss_pred cccccccccccCcccEEEEccCCceEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcC------CCCCcEEEEE
Confidence 000 00 2234568889999999999999999999998 999999999999888621 1334899999
Q ss_pred eccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eec---------------------CCccceEEEEEcCCCCEEE
Q psy7108 211 MTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVL---------------------KPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 211 ~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~---------------------~h~~~V~~l~~spdg~~l~ 267 (703)
|+|+|+++++++.++ .|++||++.+.... .+. ........++|+|||+.++
T Consensus 248 ~s~~~~~l~s~s~d~------~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~ 321 (355)
T 3vu4_A 248 WSTDGSKLAVVSDKW------TLHVFEIFNDQDNKRHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVV 321 (355)
T ss_dssp ECTTSCEEEEEETTC------EEEEEESSCCSCCCSEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEE
T ss_pred ECCCCCEEEEEECCC------EEEEEEccCCCCcccccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEE
Confidence 999999999888764 89999987653211 100 1112236789999999999
Q ss_pred EEeCCC-EEEEEcCCCce
Q psy7108 268 AATTEG-VHIYSLDSGYV 284 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~ 284 (703)
+++.|| +++|++..+..
T Consensus 322 ~~~~dg~~~~~~~~~~~~ 339 (355)
T 3vu4_A 322 VWPHTRMIETFKVVFDDE 339 (355)
T ss_dssp EETTTTEEEEEEEEEETT
T ss_pred EEeCCCeEEEEEEEcCCC
Confidence 999999 99999865543
No 129
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.85 E-value=2.5e-19 Score=195.23 Aligned_cols=218 Identities=11% Similarity=0.074 Sum_probs=173.8
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTE 105 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~ 105 (703)
+++|| .+++.+ ..+..|...+.+++|+| +++.++ +++.|+.|++||+.+++. .........+.+++|+|+|+.
T Consensus 193 v~~~d~~~~~~~--~~~~~~~~~~~~~~~~~--~~~~l~~~~~~~~~i~~~d~~~~~~-~~~~~~~~~~~~~~~~~~g~~ 267 (433)
T 3bws_A 193 VHVFDLKTLAYK--ATVDLTGKWSKILLYDP--IRDLVYCSNWISEDISVIDRKTKLE-IRKTDKIGLPRGLLLSKDGKE 267 (433)
T ss_dssp EEEEETTTCCEE--EEEECSSSSEEEEEEET--TTTEEEEEETTTTEEEEEETTTTEE-EEECCCCSEEEEEEECTTSSE
T ss_pred EEEEECCCceEE--EEEcCCCCCeeEEEEcC--CCCEEEEEecCCCcEEEEECCCCcE-EEEecCCCCceEEEEcCCCCE
Confidence 56677 466777 88889999999999999 888875 555899999999988754 444455667999999999999
Q ss_pred EEEEE--------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEecCCc
Q psy7108 106 IVVAT--------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAGQSKY 176 (703)
Q Consensus 106 las~s--------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s~dg~ 176 (703)
+++++ .|+.|++||+++++....+.... .+.+++|+|+++.+ ++++.|+.
T Consensus 268 l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~---------------------~~~~~~~~~~g~~l~~~~~~~~~ 326 (433)
T 3bws_A 268 LYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPG---------------------NKRHIVSGNTENKIYVSDMCCSK 326 (433)
T ss_dssp EEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEE---------------------CEEEEEECSSTTEEEEEETTTTE
T ss_pred EEEEECCCCccccCCCeEEEEECCCCcEEeeccCCC---------------------CcceEEECCCCCEEEEEecCCCE
Confidence 99988 48899999999998776653322 67899999999765 55688999
Q ss_pred EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC---------CCeeEEECCCCCCCccceee
Q psy7108 177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE---------GGNVVLKLPGVKKGDMAARV 247 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~---------~~~~~i~iwd~~~~~~~~~~ 247 (703)
|++||+++++.+..+.. ...+.+++|+|+|+.+++++..... ..+..|++||..+++....+
T Consensus 327 v~v~d~~~~~~~~~~~~---------~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~~ 397 (433)
T 3bws_A 327 IEVYDLKEKKVQKSIPV---------FDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEFW 397 (433)
T ss_dssp EEEEETTTTEEEEEEEC---------SSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEEE
T ss_pred EEEEECCCCcEEEEecC---------CCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEEe
Confidence 99999999988777652 2367899999999988887754210 01248999999999887776
Q ss_pred cCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCC
Q psy7108 248 LKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDS 281 (703)
Q Consensus 248 ~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~ 281 (703)
.. ...+.+++|+|+|++|++++. |+ |++|+++.
T Consensus 398 ~~-~~~~~~~~~s~dg~~l~~~~~~d~~i~v~~~~~ 432 (433)
T 3bws_A 398 EA-GNQPTGLDVSPDNRYLVISDFLDHQIRVYRRDG 432 (433)
T ss_dssp EC-SSSEEEEEECTTSCEEEEEETTTTEEEEEEETT
T ss_pred cC-CCCCceEEEcCCCCEEEEEECCCCeEEEEEecC
Confidence 65 457899999999999988775 88 99999863
No 130
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.84 E-value=1.9e-21 Score=226.87 Aligned_cols=248 Identities=9% Similarity=0.095 Sum_probs=163.5
Q ss_pred ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE------------
Q psy7108 28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDA------------ 94 (703)
Q Consensus 28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V------------ 94 (703)
+.+||.. +++.......+|...+.+++||| ||+.|++++. +.|++||+.+++.......+...+
T Consensus 93 i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SP--dG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~e 169 (723)
T 1xfd_A 93 YVLSKIPHGDPQSLDPPEVSNAKLQYAGWGP--KGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEE 169 (723)
T ss_dssp EEEEESSSCCCEECCCTTCCSCCCSBCCBCS--STTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHH
T ss_pred EEEEECCCCceEeccCCccccccccccEECC--CCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEE
Confidence 3467643 44320133345666799999999 9999999986 799999998875544333333333
Q ss_pred ------EEEEEecCCCEEEEEECCC----------------------------------eEEEEEcCCCcEEEEEecccc
Q psy7108 95 ------LCVAYKPDGTEIVVATLDG----------------------------------QLIMFDVESAAQVGSVEARRD 134 (703)
Q Consensus 95 ------~~v~~spdg~~las~s~dg----------------------------------~I~vwd~~~~~~~~~~~~~~~ 134 (703)
.+++|||||+.|++++.|+ .|++||+.+++....+..+..
T Consensus 170 e~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~~ 249 (723)
T 1xfd_A 170 EILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPDD 249 (723)
T ss_dssp TTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCCC
T ss_pred EeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCcc
Confidence 7899999999999987653 688888887765444443211
Q ss_pred CCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEEEECCCCceEEEEEeccCCccccccccc----
Q psy7108 135 LDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICIYSSREGILLKKFTITQNKSLDGINDFI---- 206 (703)
Q Consensus 135 ~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v---- 206 (703)
...+...+..++|+|||+.+++.+. +..|++||+.++++...+..+.. ..+
T Consensus 250 --------------~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~-------~~~~~~~ 308 (723)
T 1xfd_A 250 --------------PRMREYYITMVKWATSTKVAVTWLNRAQNVSILTLCDATTGVCTKKHEDESE-------AWLHRQN 308 (723)
T ss_dssp --------------GGGSSEEEEEEEESSSSEEEEEEEETTSCEEEEEEEETTTCCEEEEEEEECS-------SCCCCCC
T ss_pred --------------CCCccceeEEEEEeCCCeEEEEEEcCCCCeEEEEEEeCCCCcceEEEEeccC-------CEEeccC
Confidence 0112347899999999998877643 35799999999987766543322 122
Q ss_pred eeeeeccCCCEEEEE-cccC-CCCCeeEEECCC-CCCCc--cceeecCCccceEE-EEEcCCCCEEEEEeCC---C-EEE
Q psy7108 207 NRRKMTEFGNVSLIE-TRET-HEGGNVVLKLPG-VKKGD--MAARVLKPEVRVFC-VKFSPTGQAWVAATTE---G-VHI 276 (703)
Q Consensus 207 ~~~~~spdg~~l~~~-~~~~-~~~~~~~i~iwd-~~~~~--~~~~~~~h~~~V~~-l~~spdg~~l~s~s~D---g-v~i 276 (703)
..++|+|||+.+++. +..+ .......+.+|| ..+++ +...+..+...+.. ++|+|||+.|+..+.+ + +++
T Consensus 309 ~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l 388 (723)
T 1xfd_A 309 EEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSSSQPNSSNDNIQSITSGDWDVTKILAYDEKGNKIYFLSTEDLPRRRQL 388 (723)
T ss_dssp CCCEECTTSCSEEEEEEECCSSSSCEEEEEEECSSCCSSSCCCCBSCCSSSCEEEEEEEETTTTEEEEEESSSCTTCCEE
T ss_pred CCceEcCCCCeEEEEEecccCCCcceeEEEEEeccCCCCccceeEeecCCeEEEeeeEEcCCCCEEEEEEcCCCCcceEE
Confidence 378999999988775 3221 111135788888 45544 14444444445554 6999999999765554 6 889
Q ss_pred EEcCCCc--e---ec------ceeeeEEEccchh
Q psy7108 277 YSLDSGY--V---FD------PFLLDISITPQSV 299 (703)
Q Consensus 277 wd~~~~~--~---~~------~~~~~~~~spd~~ 299 (703)
|+++... . +. .....++|+|++.
T Consensus 389 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~spdg~ 422 (723)
T 1xfd_A 389 YSANTVGNFNRQCLSCDLVENCTYFSASFSHSMD 422 (723)
T ss_dssp EEECSSTTCCCBCSSTTSSSSCCCCEEEECTTSS
T ss_pred EEEeCCCCCCcceecccccCCCCeEEEEECCCCC
Confidence 9986421 1 11 1135689999983
No 131
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.83 E-value=2.7e-22 Score=228.14 Aligned_cols=232 Identities=9% Similarity=0.076 Sum_probs=162.0
Q ss_pred ceeeccCCCccccccccCCC-cCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCC--CceeEEEecCCCcEEEEEEec
Q psy7108 28 VKKGDMAARVLKPEVLSGHE-GPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVE--TDTQHETIQLLSDALCVAYKP 101 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~--~~~~~~~~~~~~~V~~v~~sp 101 (703)
+++|+.++... +.+..|. ..+.+++|+| | +.+++++. +...++|.+.. ...... ......+...+|+|
T Consensus 46 ~~lw~~~~g~~--~~lt~~~~~~~~~~~~sp--d-~~l~~~~~~~g~~~~~l~~~~~~~~g~~~~-l~~~~~~~~~~~s~ 119 (582)
T 3o4h_A 46 VNAYLYDGGET--VKLNREPINSVLDPHYGV--G-RVILVRDVSKGAEQHALFKVNTSRPGEEQR-LEAVKPMRILSGVD 119 (582)
T ss_dssp EEEEEEETTEE--EECCSSCCSEECEECTTC--S-EEEEEEECSTTSCCEEEEEEETTSTTCCEE-CTTSCSBEEEEEEE
T ss_pred eeEEEEcCCCc--EeeecccccccccccCCC--C-eEEEEeccCCCCcceEEEEEeccCCCcccc-ccCCCCceeeeeCC
Confidence 45565455544 5666665 6899999999 8 77777765 45567766543 322233 33333455779999
Q ss_pred CCCE-EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----Cc
Q psy7108 102 DGTE-IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KY 176 (703)
Q Consensus 102 dg~~-las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~ 176 (703)
||+. +++++.++.+.+||+.+++.......+ . .+++|+|||+.|++++.+ +.
T Consensus 120 dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~----------------------~-~~~~~spDG~~la~~~~~~~~~~~ 176 (582)
T 3o4h_A 120 TGEAVVFTGATEDRVALYALDGGGLRELARLP----------------------G-FGFVSDIRGDLIAGLGFFGGGRVS 176 (582)
T ss_dssp CSSCEEEEEECSSCEEEEEEETTEEEEEEEES----------------------S-CEEEEEEETTEEEEEEEEETTEEE
T ss_pred CCCeEEEEecCCCCceEEEccCCcEEEeecCC----------------------C-ceEEECCCCCEEEEEEEcCCCCeE
Confidence 9863 334444555669999988765544331 2 678999999999988776 77
Q ss_pred EEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEE
Q psy7108 177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFC 256 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~ 256 (703)
|++||+.+++.. .+..+ ...+..++|||||+.++.+..+ +...|++||+.+++.. .+..|...+.+
T Consensus 177 i~~~d~~~g~~~-~l~~~--------~~~~~~~~~SpDG~~l~~~~~~----~~~~i~~~d~~~~~~~-~~~~~~~~~~~ 242 (582)
T 3o4h_A 177 LFTSNLSSGGLR-VFDSG--------EGSFSSASISPGMKVTAGLETA----REARLVTVDPRDGSVE-DLELPSKDFSS 242 (582)
T ss_dssp EEEEETTTCCCE-EECCS--------SCEEEEEEECTTSCEEEEEECS----SCEEEEEECTTTCCEE-ECCCSCSHHHH
T ss_pred EEEEcCCCCCce-EeecC--------CCccccceECCCCCEEEEccCC----CeeEEEEEcCCCCcEE-EccCCCcChhh
Confidence 999999988764 33322 3367899999999998843332 2358999999998877 67777777777
Q ss_pred EE--------EcCCCCEEEEEeCCC-EEEEEcCCCceecc---eeeeEEEccchhhhHhhcCC
Q psy7108 257 VK--------FSPTGQAWVAATTEG-VHIYSLDSGYVFDP---FLLDISITPQSVKEALADKD 307 (703)
Q Consensus 257 l~--------~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~---~~~~~~~spd~~~~~l~sg~ 307 (703)
++ |+|||..+++++.++ +++|++ ++.... ...+++|+ ++ ..+.+.+
T Consensus 243 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~--g~~~~~~~~~v~~~~~s-dg--~~l~~~s 300 (582)
T 3o4h_A 243 YRPTAITWLGYLPDGRLAVVARREGRSAVFID--GERVEAPQGNHGRVVLW-RG--KLVTSHT 300 (582)
T ss_dssp HCCSEEEEEEECTTSCEEEEEEETTEEEEEET--TEEECCCSSEEEEEEEE-TT--EEEEEEE
T ss_pred hhhccccceeEcCCCcEEEEEEcCCcEEEEEE--CCeeccCCCceEEEEec-CC--EEEEEEc
Confidence 77 999998889999999 999999 655432 23467788 77 4444433
No 132
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.83 E-value=1e-18 Score=183.04 Aligned_cols=255 Identities=11% Similarity=0.030 Sum_probs=180.8
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCce-eEEEecCCCcEEEEEEecCCC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDT-QHETIQLLSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~-~~~~~~~~~~V~~v~~spdg~ 104 (703)
+.+|| .+++++ ..+..+...+ +++|+| +++++++++. ++.|.+||+.+++. ......+.....+++|+|+|+
T Consensus 22 v~~~d~~~~~~~--~~~~~~~~~~-~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~ 96 (331)
T 3u4y_A 22 ISFFSTDTLEIL--NQITLGYDFV-DTAITS--DCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQSSMADVDITPDDQ 96 (331)
T ss_dssp EEEEETTTCCEE--EEEECCCCEE-EEEECS--SSCEEEEEESTTCEEEEEECSSSSCEEEEEEECSSCCCCEEECTTSS
T ss_pred EEEEeCccccee--eeEEccCCcc-eEEEcC--CCCEEEEEeCCCCeEEEEECCCCceeEEecccCCCCccceEECCCCC
Confidence 33444 367777 6666666677 999999 9997766655 88999999988866 444444555555599999999
Q ss_pred EEEEEECCC---eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCc-EEE
Q psy7108 105 EIVVATLDG---QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKY-ICI 179 (703)
Q Consensus 105 ~las~s~dg---~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~-I~l 179 (703)
+++++..++ .|.+||+.+++.+..+.... ...+++|+|||++++++ ..++. |.+
T Consensus 97 ~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~---------------------~~~~~~~spdg~~l~~~~~~~~~~i~~ 155 (331)
T 3u4y_A 97 FAVTVTGLNHPFNMQSYSFLKNKFISTIPIPY---------------------DAVGIAISPNGNGLILIDRSSANTVRR 155 (331)
T ss_dssp EEEECCCSSSSCEEEEEETTTTEEEEEEECCT---------------------TEEEEEECTTSSCEEEEEETTTTEEEE
T ss_pred EEEEecCCCCcccEEEEECCCCCeEEEEECCC---------------------CccceEECCCCCEEEEEecCCCceEEE
Confidence 999555443 89999999999887776543 46899999999866655 45578 999
Q ss_pred EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc---ceeecCCccceEE
Q psy7108 180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM---AARVLKPEVRVFC 256 (703)
Q Consensus 180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~---~~~~~~h~~~V~~ 256 (703)
|++.....+...... . . ........++|+|+|+.+++++..+ ..|.+||+.+++. +..+.. ...+.+
T Consensus 156 ~~~~~~g~~~~~~~~-~--~-~~~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~d~~~~~~~~~~~~~~~-~~~~~~ 225 (331)
T 3u4y_A 156 FKIDADGVLFDTGQE-F--I-SGGTRPFNITFTPDGNFAFVANLIG-----NSIGILETQNPENITLLNAVGT-NNLPGT 225 (331)
T ss_dssp EEECTTCCEEEEEEE-E--E-CSSSSEEEEEECTTSSEEEEEETTT-----TEEEEEECSSTTSCEEEEEEEC-SSCCCC
T ss_pred EEECCCCcEeecCCc-c--c-cCCCCccceEECCCCCEEEEEeCCC-----CeEEEEECCCCcccceeeeccC-CCCCce
Confidence 999864433222100 0 0 1122467899999999777766432 3799999998887 555553 356788
Q ss_pred EEEcCCCCEEEEEeC-CC-EEEEEcCCCce--eccee-------------eeEEEccchhhhHh-hcCCcceEEEEEEec
Q psy7108 257 VKFSPTGQAWVAATT-EG-VHIYSLDSGYV--FDPFL-------------LDISITPQSVKEAL-ADKDYAKALMMSLKL 318 (703)
Q Consensus 257 l~~spdg~~l~s~s~-Dg-v~iwd~~~~~~--~~~~~-------------~~~~~spd~~~~~l-~sg~~~~~l~la~~l 318 (703)
++|+|||+++++++. ++ |.+||..+++. ...+. ..++|+|++ ..+ .++..++.+.+ |++
T Consensus 226 ~~~spdg~~l~v~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg--~~l~v~~~~~~~v~v-~d~ 302 (331)
T 3u4y_A 226 IVVSRDGSTVYVLTESTVDVFNFNQLSGTLSFVKSFGHGLLIDPRPLFGANQMALNKTE--TKLFISANISRELKV-FTI 302 (331)
T ss_dssp EEECTTSSEEEEECSSEEEEEEEETTTTEEEEEEEEECCCCCCCGGGTTCCCEEECTTS--SEEEEEETTTTEEEE-EET
T ss_pred EEECCCCCEEEEEEcCCCEEEEEECCCCceeeecccccccccCCCCcccccceEECCCC--CEEEEecCCCCcEEE-EEe
Confidence 999999998866654 44 99999998876 22211 226999999 444 34455667777 887
Q ss_pred Cch
Q psy7108 319 NEQ 321 (703)
Q Consensus 319 ~~~ 321 (703)
..+
T Consensus 303 ~~~ 305 (331)
T 3u4y_A 303 SGK 305 (331)
T ss_dssp TSC
T ss_pred cCC
Confidence 754
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.81 E-value=5.9e-19 Score=180.39 Aligned_cols=235 Identities=13% Similarity=0.157 Sum_probs=166.1
Q ss_pred CCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEEecC-CCcEE
Q psy7108 18 GGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHETIQL-LSDAL 95 (703)
Q Consensus 18 ~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~~~~-~~~V~ 95 (703)
+.+..+.+|++. +++ . ..+..|...|.+++|+| ++++|++++ ++.|++||+.+ ++.......+ ...+.
T Consensus 19 ~~~~~i~~~d~~----~~~-~--~~~~~~~~~v~~~~~sp--dg~~l~~~~-~~~i~~~d~~~~~~~~~~~~~~~~~~~~ 88 (297)
T 2ojh_A 19 SMRSSIEIFNIR----TRK-M--RVVWQTPELFEAPNWSP--DGKYLLLNS-EGLLYRLSLAGDPSPEKVDTGFATICNN 88 (297)
T ss_dssp CCCEEEEEEETT----TTE-E--EEEEEESSCCEEEEECT--TSSEEEEEE-TTEEEEEESSSCCSCEECCCTTCCCBCS
T ss_pred CcceeEEEEeCC----CCc-e--eeeccCCcceEeeEECC--CCCEEEEEc-CCeEEEEeCCCCCCceEecccccccccc
Confidence 444555555443 343 4 56677999999999999 999999987 78999999988 6543333333 36788
Q ss_pred EEEEecCCCEEEEEEC--CC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE-E
Q psy7108 96 CVAYKPDGTEIVVATL--DG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL-A 170 (703)
Q Consensus 96 ~v~~spdg~~las~s~--dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~-s 170 (703)
+++|+|+|+.|++++. ++ .|..|+..+++. ..+..+ ..+..++|+||++.|+ +
T Consensus 89 ~~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~-~~~~~~---------------------~~~~~~~~spdg~~l~~~ 146 (297)
T 2ojh_A 89 DHGISPDGALYAISDKVEFGKSAIYLLPSTGGTP-RLMTKN---------------------LPSYWHGWSPDGKSFTYC 146 (297)
T ss_dssp CCEECTTSSEEEEEECTTTSSCEEEEEETTCCCC-EECCSS---------------------SSEEEEEECTTSSEEEEE
T ss_pred ceEECCCCCEEEEEEeCCCCcceEEEEECCCCce-EEeecC---------------------CCccceEECCCCCEEEEE
Confidence 9999999999999983 34 455555555542 222222 1478899999999887 6
Q ss_pred EecCCcEEEEECC--CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-CCccceee
Q psy7108 171 AGQSKYICIYSSR--EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-KGDMAARV 247 (703)
Q Consensus 171 ~s~dg~I~lwD~~--~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~~~~~ 247 (703)
++.++.+++|++. ++.. ..+. .+...+.+++|+|+|+.+++++..+ ..+++|++. .+.....+
T Consensus 147 ~~~~~~~~l~~~~~~~~~~-~~~~--------~~~~~~~~~~~s~dg~~l~~~~~~~-----~~~~i~~~~~~~~~~~~~ 212 (297)
T 2ojh_A 147 GIRDQVFDIYSMDIDSGVE-TRLT--------HGEGRNDGPDYSPDGRWIYFNSSRT-----GQMQIWRVRVDGSSVERI 212 (297)
T ss_dssp EEETTEEEEEEEETTTCCE-EECC--------CSSSCEEEEEECTTSSEEEEEECTT-----SSCEEEEEETTSSCEEEC
T ss_pred ECCCCceEEEEEECCCCcc-eEcc--------cCCCccccceECCCCCEEEEEecCC-----CCccEEEECCCCCCcEEE
Confidence 7788989999864 3333 2222 2234788999999999888766422 246677665 44556667
Q ss_pred cCCccceEEEEEcCCCCEEEEEeCC-----------C-EEEEEcCCCceecce--------eeeEEEccch
Q psy7108 248 LKPEVRVFCVKFSPTGQAWVAATTE-----------G-VHIYSLDSGYVFDPF--------LLDISITPQS 298 (703)
Q Consensus 248 ~~h~~~V~~l~~spdg~~l~s~s~D-----------g-v~iwd~~~~~~~~~~--------~~~~~~spd~ 298 (703)
..+...+.+++|+|+|++|++++.+ + |.+|++.+++..... ...++|+|++
T Consensus 213 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg 283 (297)
T 2ojh_A 213 TDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDG 283 (297)
T ss_dssp CCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTS
T ss_pred ecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCC
Confidence 7788889999999999999888765 4 899999887652221 2457788887
No 134
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.80 E-value=1e-17 Score=188.13 Aligned_cols=263 Identities=14% Similarity=0.150 Sum_probs=189.3
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEc--CCCceeEEEecCCCcEEEEEEec---
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNA--VETDTQHETIQLLSDALCVAYKP--- 101 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~--~~~~~~~~~~~~~~~V~~v~~sp--- 101 (703)
+.+|| .+++++ .++..+.. +.+++|+| +|++|++++.|++|++||+ .+++.... ..+...+..++|+|
T Consensus 161 V~v~D~~t~~~~--~~i~~g~~-~~~v~~sp--dg~~l~v~~~d~~V~v~D~~~~t~~~~~~-i~~g~~p~~va~sp~~~ 234 (543)
T 1nir_A 161 IALVDGDSKKIV--KVIDTGYA-VHISRMSA--SGRYLLVIGRDARIDMIDLWAKEPTKVAE-IKIGIEARSVESSKFKG 234 (543)
T ss_dssp EEEEETTTCCEE--EEEECSTT-EEEEEECT--TSCEEEEEETTSEEEEEETTSSSCEEEEE-EECCSEEEEEEECCSTT
T ss_pred EEEEECCCceEE--EEEecCcc-cceEEECC--CCCEEEEECCCCeEEEEECcCCCCcEEEE-EecCCCcceEEeCCCcC
Confidence 44455 478888 88873333 89999999 9999999999999999999 67654444 44667789999999
Q ss_pred -CCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC-CccEEEEEEcCCCCEE-EEEecCCcE
Q psy7108 102 -DGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK-AKAVSTVCYSADGSCI-LAAGQSKYI 177 (703)
Q Consensus 102 -dg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V~~i~~spdg~~l-~s~s~dg~I 177 (703)
||+++++++. +++|.+||..+++.+..+..+..... ....| ...+..+.++|++..+ ++...++.|
T Consensus 235 ~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~----------~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 235 YEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVD----------TQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp CTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSS----------SCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred CCCCEEEEEEccCCeEEEEeccccccceeecccCcccC----------ccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 9999999885 89999999999999988875321000 00001 1268899999987655 456678999
Q ss_pred EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC----Cccc
Q psy7108 178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK----PEVR 253 (703)
Q Consensus 178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~----h~~~ 253 (703)
.+||+.+.+.+....... ...+..+.|+|+|+++++++..+ ..|.+||..++++...+.. |.+.
T Consensus 305 ~vvd~~~~~~l~~~~i~~-------~~~~~~~~~spdg~~l~va~~~~-----~~v~v~D~~tg~l~~~i~~g~~ph~g~ 372 (543)
T 1nir_A 305 LLVNYKDIDNLTVTSIGA-------APFLHDGGWDSSHRYFMTAANNS-----NKVAVIDSKDRRLSALVDVGKTPHPGR 372 (543)
T ss_dssp EEEECTTSSSCEEEEEEC-------CSSCCCEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSBCCTT
T ss_pred EEEEecCCCcceeEEecc-------CcCccCceECCCCCEEEEEecCC-----CeEEEEECCCCeEEEeeccCCCCCCCC
Confidence 999998876544222111 23567899999999887766432 3799999999988777664 5444
Q ss_pred eEEEEEcCC-CCEEEEEe-CCC-EEEEEcCC-------Cceeccee------eeEEEccchhhhHhhcCC-------cce
Q psy7108 254 VFCVKFSPT-GQAWVAAT-TEG-VHIYSLDS-------GYVFDPFL------LDISITPQSVKEALADKD-------YAK 310 (703)
Q Consensus 254 V~~l~~spd-g~~l~s~s-~Dg-v~iwd~~~-------~~~~~~~~------~~~~~spd~~~~~l~sg~-------~~~ 310 (703)
...+ ++|+ |..+++++ .|+ |.+|++++ .++++.+. ..+.++|++ ..|.... .+.
T Consensus 373 g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~~~~~~~~~~~v~~l~~~g~~~~~v~~~pdg--~~l~v~~~~~~~~~~~~ 449 (543)
T 1nir_A 373 GANF-VHPKYGPVWSTSHLGDGSISLIGTDPKNHPQYAWKKVAELQGQGGGSLFIKTHPKS--SHLYVDTTFNPDARISQ 449 (543)
T ss_dssp CEEE-EETTTEEEEEEEBSSSSEEEEEECCTTTCTTTBTSEEEEEECSCSCCCCEECCTTC--CEEEECCTTCSSHHHHT
T ss_pred Cccc-CCCCCccEEEeccCCCceEEEEEeCCCCCchhcCeEEEEEEcCCCCceEEEcCCCC--CcEEEecCCCCCcccCc
Confidence 4333 4787 55567765 467 99999988 66655543 458999999 5555544 366
Q ss_pred EEEEEEecCchh
Q psy7108 311 ALMMSLKLNEQG 322 (703)
Q Consensus 311 ~l~la~~l~~~~ 322 (703)
++.+ |++++.+
T Consensus 450 ~v~v-~d~~~~~ 460 (543)
T 1nir_A 450 SVAV-FDLKNLD 460 (543)
T ss_dssp CEEE-EETTCTT
T ss_pred eEEE-EECCCCC
Confidence 7877 8877653
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.79 E-value=9.6e-18 Score=175.86 Aligned_cols=268 Identities=11% Similarity=0.115 Sum_probs=176.0
Q ss_pred eeecccCCceEEecCCceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC-CcEEEEEcC--CCce-eEEE
Q psy7108 12 TRETHEGGNVVLKLPGVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD-KTVKLWNAV--ETDT-QHET 87 (703)
Q Consensus 12 ~~~~~~~~~~~i~~~~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D-g~V~iWd~~--~~~~-~~~~ 87 (703)
.++..++.+..+.+|++.. +++.. ......|...+.+++|+| ++++|++++.+ +.|++|++. ++.. ....
T Consensus 6 ~l~~~~~~~~~v~~~~~~~---~~~~~-~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~v~~~~~~~~~~~~~~~~~ 79 (343)
T 1ri6_A 6 TVYIASPESQQIHVWNLNH---EGALT-LTQVVDVPGQVQPMVVSP--DKRYLYVGVRPEFRVLAYRIAPDDGALTFAAE 79 (343)
T ss_dssp EEEEEEGGGTEEEEEEECT---TSCEE-EEEEEECSSCCCCEEECT--TSSEEEEEETTTTEEEEEEECTTTCCEEEEEE
T ss_pred EEEEeCCCCCeEEEEEECC---CCcEE-EeeeEecCCCCceEEECC--CCCEEEEeecCCCeEEEEEecCCCCceeeccc
Confidence 3444444555666665531 34322 012235778899999999 99999888876 899999997 4432 2222
Q ss_pred ecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108 88 IQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVESA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA 163 (703)
Q Consensus 88 ~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp 163 (703)
......+.+++|+|+|+.+++++. ++.|.+||++++ +....+..+. .+.+++|+|
T Consensus 80 ~~~~~~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~---------------------~~~~~~~s~ 138 (343)
T 1ri6_A 80 SALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLD---------------------GCHSANISP 138 (343)
T ss_dssp EECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCT---------------------TBCCCEECT
T ss_pred cccCCCCcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCC---------------------CceEEEECC
Confidence 333447899999999998877765 889999999533 3333333322 477899999
Q ss_pred CCCEEEEEe-cCCcEEEEECCC-CceEEEE--EeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108 164 DGSCILAAG-QSKYICIYSSRE-GILLKKF--TITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK 239 (703)
Q Consensus 164 dg~~l~s~s-~dg~I~lwD~~~-~~~~~~~--~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~ 239 (703)
+|+.+++++ .++.|.+||+.+ ++..... ..... ....+..++|+|+|+.+++++..+ ..+.+||+.
T Consensus 139 dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~pdg~~l~~~~~~~-----~~i~~~~~~ 208 (343)
T 1ri6_A 139 DNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTV-----EGAGPRHMVFHPNEQYAYCVNELN-----SSVDVWELK 208 (343)
T ss_dssp TSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECS-----TTCCEEEEEECTTSSEEEEEETTT-----TEEEEEESS
T ss_pred CCCEEEEecCCCCEEEEEEecCCCceeeecccccccC-----CCCCcceEEECCCCCEEEEEeCCC-----CEEEEEEec
Confidence 999888877 889999999987 6543322 11111 113567899999999877665322 379999985
Q ss_pred C--Ccc--ceeec----C--CccceEEEEEcCCCCEEEEE-eCCC-EEEEEcC--CCc--eecce-----eeeEEEccch
Q psy7108 240 K--GDM--AARVL----K--PEVRVFCVKFSPTGQAWVAA-TTEG-VHIYSLD--SGY--VFDPF-----LLDISITPQS 298 (703)
Q Consensus 240 ~--~~~--~~~~~----~--h~~~V~~l~~spdg~~l~s~-s~Dg-v~iwd~~--~~~--~~~~~-----~~~~~~spd~ 298 (703)
. ++. ..... + ....+.+++|+|+|++|+++ ..++ +.+|++. ++. ....+ ...++|+|++
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 288 (343)
T 1ri6_A 209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG 288 (343)
T ss_dssp CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC
Confidence 3 432 11221 1 12356789999999988644 4677 9999998 332 22111 3568999999
Q ss_pred hhhHhhc-CCcceEEEEEEecC
Q psy7108 299 VKEALAD-KDYAKALMMSLKLN 319 (703)
Q Consensus 299 ~~~~l~s-g~~~~~l~la~~l~ 319 (703)
..+.. +..++.+.+ |+++
T Consensus 289 --~~l~~~~~~~~~v~v-~~~d 307 (343)
T 1ri6_A 289 --KYLIAAGQKSHHISV-YEIV 307 (343)
T ss_dssp --SEEEEECTTTCEEEE-EEEE
T ss_pred --CEEEEecCCCCeEEE-EEEc
Confidence 54443 435677776 7554
No 136
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.78 E-value=8.5e-17 Score=169.59 Aligned_cols=235 Identities=10% Similarity=0.164 Sum_probs=177.8
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCC---------cEEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLS---------DALC 96 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~---------~V~~ 96 (703)
+..|| .+++.+ ..+.. ...+.+++|+| +++.++ ++..++.|.+||..+++....+..+.. .+.+
T Consensus 71 v~~~d~~~~~~~--~~~~~-~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (353)
T 3vgz_A 71 VYRLDPVTLEVT--QAIHN-DLKPFGATINN--TTQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPRE 145 (353)
T ss_dssp EEEECTTTCCEE--EEEEE-SSCCCSEEEET--TTTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEEE
T ss_pred EEEEcCCCCeEE--EEEec-CCCcceEEECC--CCCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCce
Confidence 55566 366666 55553 34578899999 998554 556679999999988876555544322 2788
Q ss_pred EEEecCCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108 97 VAYKPDGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS 174 (703)
Q Consensus 97 v~~spdg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d 174 (703)
++|+|+|+.+++++ .++.|.+||+.+++....+..+.. .+..++|+|+|+.+++++.+
T Consensus 146 ~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~--------------------~~~~~~~s~dg~~l~~~~~~ 205 (353)
T 3vgz_A 146 LVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGK--------------------MSTGLALDSEGKRLYTTNAD 205 (353)
T ss_dssp EEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCT--------------------TCCCCEEETTTTEEEEECTT
T ss_pred EEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCC--------------------ccceEEECCCCCEEEEEcCC
Confidence 99999999887776 478899999999998887763322 46778999999999999999
Q ss_pred CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce
Q psy7108 175 KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV 254 (703)
Q Consensus 175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V 254 (703)
+.|.+||+.+++....+..... +....+..++++|+|+.++++...+ ..|.+||..+++....+..+. .
T Consensus 206 ~~i~~~d~~~~~~~~~~~~~~~----~~~~~~~~~~~s~dg~~l~~~~~~~-----~~v~~~d~~~~~~~~~~~~~~--~ 274 (353)
T 3vgz_A 206 GELITIDTADNKILSRKKLLDD----GKEHFFINISLDTARQRAFITDSKA-----AEVLVVDTRNGNILAKVAAPE--S 274 (353)
T ss_dssp SEEEEEETTTTEEEEEEECCCS----SSCCCEEEEEEETTTTEEEEEESSS-----SEEEEEETTTCCEEEEEECSS--C
T ss_pred CeEEEEECCCCeEEEEEEcCCC----CCCcccceEEECCCCCEEEEEeCCC-----CEEEEEECCCCcEEEEEEcCC--C
Confidence 9999999999988877764221 1233567899999999887776432 379999999988776666443 2
Q ss_pred EEEEEcCCCCEEEEEe-CCC-EEEEEcCCCceeccee-----eeEEEccch
Q psy7108 255 FCVKFSPTGQAWVAAT-TEG-VHIYSLDSGYVFDPFL-----LDISITPQS 298 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s-~Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~ 298 (703)
.+++|+|+|+++++++ .++ |.+||..+++....+. ..++|+|++
T Consensus 275 ~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg 325 (353)
T 3vgz_A 275 LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADG 325 (353)
T ss_dssp CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTS
T ss_pred ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCC
Confidence 5699999999776555 567 9999999888755443 568889988
No 137
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.77 E-value=7e-18 Score=197.22 Aligned_cols=245 Identities=9% Similarity=0.044 Sum_probs=175.1
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeC-CC-----cEEEEEcCCCceeEEEecCC------------------------CcEEE
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASW-DK-----TVKLWNAVETDTQHETIQLL------------------------SDALC 96 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~-Dg-----~V~iWd~~~~~~~~~~~~~~------------------------~~V~~ 96 (703)
...+.+++|+| ||++|++++. |+ +|++||+.+++.......+. ..+.+
T Consensus 36 ~~~~~~~~~Sp--dG~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAP--DGSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECT--TSSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEec--CCCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 45799999999 9999999998 88 89999998886544433332 23788
Q ss_pred EEEecCCCEEEEEECCCeEEEEEcCCCc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC
Q psy7108 97 VAYKPDGTEIVVATLDGQLIMFDVESAA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS 174 (703)
Q Consensus 97 v~~spdg~~las~s~dg~I~vwd~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d 174 (703)
++|||||++|++++. +.|++||+.+++ ....+..+ ...+..++|+|||++|++++ +
T Consensus 114 ~~~SpDg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~--------------------~~~~~~~~~SPDG~~la~~~-~ 171 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHG--------------------EGFATDAKLSPKGGFVSFIR-G 171 (741)
T ss_dssp CEECTTSSEEEEEET-TEEEEEESSSCSTTSCCBCCCS--------------------SSCEEEEEECTTSSEEEEEE-T
T ss_pred eEECCCCCEEEEEeC-CcEEEEECCCCCcceEEEcccC--------------------CcccccccCCCCCCEEEEEe-C
Confidence 999999999999886 999999998872 22223332 23789999999999999887 4
Q ss_pred CcEEEEECCCCceEEEEEeccCCcccccc--------ccceeeeeccCCCEEEEEcccCC--------------------
Q psy7108 175 KYICIYSSREGILLKKFTITQNKSLDGIN--------DFINRRKMTEFGNVSLIETRETH-------------------- 226 (703)
Q Consensus 175 g~I~lwD~~~~~~~~~~~~~~~~~~~~~~--------~~v~~~~~spdg~~l~~~~~~~~-------------------- 226 (703)
+.|++||+.+++..............++. ..+..++|||||+.+++++.++.
T Consensus 172 ~~i~~~d~~~g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~ 251 (741)
T 2ecf_A 172 RNLWVIDLASGRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQ 251 (741)
T ss_dssp TEEEEEETTTTEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEE
T ss_pred CcEEEEecCCCCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEe
Confidence 68999999988765433222111001110 12477999999999988765431
Q ss_pred -------CCCeeEEECCCCCC-Cccceeec--CCccceEEEEEcCCCCEEEEEeC-----CC-EEEEEcCCCceeccee-
Q psy7108 227 -------EGGNVVLKLPGVKK-GDMAARVL--KPEVRVFCVKFSPTGQAWVAATT-----EG-VHIYSLDSGYVFDPFL- 289 (703)
Q Consensus 227 -------~~~~~~i~iwd~~~-~~~~~~~~--~h~~~V~~l~~spdg~~l~s~s~-----Dg-v~iwd~~~~~~~~~~~- 289 (703)
......|.+||+.+ ++...... .|...+.+++| |||++|++++. +. |.+||+.+++....+.
T Consensus 252 ~~~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~ 330 (741)
T 2ecf_A 252 RYPAAGDANVQVKLGVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQRVLAHE 330 (741)
T ss_dssp ECCBTTSCCCEEEEEEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEEEEEEE
T ss_pred ecCCCCCCCCeeEEEEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceEEEEEc
Confidence 11223788999988 77654433 47788999999 99999987653 34 8999999887643321
Q ss_pred ---------eeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 290 ---------LDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 290 ---------~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
..++|+||+ .++.+++.++...+ |..+
T Consensus 331 ~~~~~~~~~~~~~~spdg--~~~~~~~~~g~~~l-~~~~ 366 (741)
T 2ecf_A 331 TSPTWVPLHNSLRFLDDG--SILWSSERTGFQHL-YRID 366 (741)
T ss_dssp ECSSCCCCCSCCEECTTS--CEEEEECTTSSCEE-EEEC
T ss_pred CCCCcCCcCCceEECCCC--eEEEEecCCCccEE-EEEc
Confidence 368999999 46666666665555 4443
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.76 E-value=7.2e-18 Score=197.15 Aligned_cols=233 Identities=11% Similarity=0.088 Sum_probs=163.6
Q ss_pred CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108 49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV 126 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~ 126 (703)
.|.+++||| ||++|++++. +.|++||+.++. ....+..+...+.+++|||||+.|++++ ++.|++||+.+++..
T Consensus 110 ~v~~~~~Sp--Dg~~l~~~~~-~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~ 185 (741)
T 2ecf_A 110 GIVDYQWSP--DAQRLLFPLG-GELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQM 185 (741)
T ss_dssp ESCCCEECT--TSSEEEEEET-TEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEE
T ss_pred CcceeEECC--CCCEEEEEeC-CcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEe-CCcEEEEecCCCCEE
Confidence 388999999 9999999987 899999998773 4455666778899999999999999987 569999999988765
Q ss_pred EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-------------------------------
Q psy7108 127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK------------------------------- 175 (703)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg------------------------------- 175 (703)
.....+...... ...+.. . ......+..++|+|||++|++++.|+
T Consensus 186 ~~~~~~~~~~~~-g~~~~v-~--~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 186 QLTADGSTTIGN-GIAEFV-A--DEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp ECCCCCCSSEEE-SCCCHH-H--HHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred EeccCCccceec-ccccee-e--eeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 543332110000 000000 0 00012257799999999999987665
Q ss_pred --cEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108 176 --YICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV 252 (703)
Q Consensus 176 --~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~ 252 (703)
.|++||+.+ ++....... ..+...+..++| |||+.+++.+.+. ...+..|.+||+.+++.......+..
T Consensus 262 ~~~l~~~d~~~~~~~~~~~~~------~~~~~~~~~~~~-pDg~~l~~~~~~~-~~~~~~i~~~d~~~g~~~~~~~~~~~ 333 (741)
T 2ecf_A 262 QVKLGVISPAEQAQTQWIDLG------KEQDIYLARVNW-RDPQHLSFQRQSR-DQKKLDLVEVTLASNQQRVLAHETSP 333 (741)
T ss_dssp EEEEEEECSSTTCCCEEECCC------SCSSEEEEEEEE-EETTEEEEEEEET-TSSEEEEEEEETTTCCEEEEEEEECS
T ss_pred eeEEEEEECCCCCceEEecCC------CCcceEEEEEEe-CCCCEEEEEEecc-cCCeEEEEEEECCCCceEEEEEcCCC
Confidence 789999988 765433211 124457889999 9999998876532 23346899999999887665554432
Q ss_pred ----ceEEEEEcCCCCEEEEEeCCC-EEEEEcC-CCceecce------eeeE-EEccch
Q psy7108 253 ----RVFCVKFSPTGQAWVAATTEG-VHIYSLD-SGYVFDPF------LLDI-SITPQS 298 (703)
Q Consensus 253 ----~V~~l~~spdg~~l~s~s~Dg-v~iwd~~-~~~~~~~~------~~~~-~~spd~ 298 (703)
.+.+++|+|||+++++++.|+ ++||.++ .+. ...+ ...+ .|+|++
T Consensus 334 ~~~~~~~~~~~spdg~~~~~~~~~g~~~l~~~~~~~~-~~~l~~~~~~v~~~~~~s~dg 391 (741)
T 2ecf_A 334 TWVPLHNSLRFLDDGSILWSSERTGFQHLYRIDSKGK-AAALTHGNWSVDELLAVDEKA 391 (741)
T ss_dssp SCCCCCSCCEECTTSCEEEEECTTSSCEEEEECSSSC-EEESCCSSSCEEEEEEEETTT
T ss_pred CcCCcCCceEECCCCeEEEEecCCCccEEEEEcCCCC-eeeeeecceEEEeEeEEeCCC
Confidence 456899999999888888888 7777765 232 2222 1234 599998
No 139
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.75 E-value=2.2e-16 Score=166.48 Aligned_cols=246 Identities=9% Similarity=0.077 Sum_probs=181.4
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEeC-------CCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEE
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSASW-------DKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIM 117 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs~-------Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~v 117 (703)
....+..++|+| +++.+++++. ++.|.+||..+++....+ .....+.+++|+|+|+.++++ ..++.|.+
T Consensus 39 ~~~~~~~~~~s~--dg~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~ 115 (353)
T 3vgz_A 39 VGKGAYEMAYSQ--QENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAI-HNDLKPFGATINNTTQTLWFGNTVNSAVTA 115 (353)
T ss_dssp EESSEEEEEEET--TTTEEEEEECCCTTTEESEEEEEECTTTCCEEEEE-EESSCCCSEEEETTTTEEEEEETTTTEEEE
T ss_pred hccCccceEECC--CCCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEE-ecCCCcceEEECCCCCEEEEEecCCCEEEE
Confidence 345688999999 9998888774 568999999888654444 445567889999999966555 44789999
Q ss_pred EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEEecc
Q psy7108 118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFTITQ 195 (703)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~~~~ 195 (703)
||..+++.+..+..+...... ......+.+++|+|+|+.+++++ .++.|.+||+.+++.+..+....
T Consensus 116 ~d~~~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~ 184 (353)
T 3vgz_A 116 IDAKTGEVKGRLVLDDRKRTE-----------EVRPLQPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTG 184 (353)
T ss_dssp EETTTCCEEEEEESCCCCCCS-----------SCCCCEEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCC
T ss_pred EeCCCCeeEEEEecCCCcccc-----------ccCCCCCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCC
Confidence 999999988887764321000 00011368899999999888776 47889999999998887765222
Q ss_pred CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC----CccceEEEEEcCCCCEEEEEeC
Q psy7108 196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK----PEVRVFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~----h~~~V~~l~~spdg~~l~s~s~ 271 (703)
..+..++|+|+|+.++++..++ .+.+||..+++....+.. +...+.+++|+|+|+.+++++.
T Consensus 185 --------~~~~~~~~s~dg~~l~~~~~~~------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~ 250 (353)
T 3vgz_A 185 --------KMSTGLALDSEGKRLYTTNADG------ELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDS 250 (353)
T ss_dssp --------TTCCCCEEETTTTEEEEECTTS------EEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEES
T ss_pred --------CccceEEECCCCCEEEEEcCCC------eEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeC
Confidence 2467889999999988877643 788999999887766553 4556888999999998877665
Q ss_pred C-C-EEEEEcCCCceeccee----eeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 272 E-G-VHIYSLDSGYVFDPFL----LDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 272 D-g-v~iwd~~~~~~~~~~~----~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+ + |.+||..+++....+. ..++|+|++.. ++.+...++.+.+ |+....
T Consensus 251 ~~~~v~~~d~~~~~~~~~~~~~~~~~~~~s~dg~~-l~v~~~~~~~v~~-~d~~~~ 304 (353)
T 3vgz_A 251 KAAEVLVVDTRNGNILAKVAAPESLAVLFNPARNE-AYVTHRQAGKVSV-IDAKSY 304 (353)
T ss_dssp SSSEEEEEETTTCCEEEEEECSSCCCEEEETTTTE-EEEEETTTTEEEE-EETTTT
T ss_pred CCCEEEEEECCCCcEEEEEEcCCCceEEECCCCCE-EEEEECCCCeEEE-EECCCC
Confidence 5 5 9999999888755443 46889999832 3444445667776 776543
No 140
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.75 E-value=1.2e-19 Score=209.47 Aligned_cols=208 Identities=13% Similarity=0.016 Sum_probs=141.6
Q ss_pred ccccCCCcCeE---------EEEEc--CCCCCCE-EEEEeC-CCcEEEEEcC--CCceeEEEec-----CCCcEEEEEEe
Q psy7108 41 EVLSGHEGPVS---------CIEFS--PVLSSTG-MVSASW-DKTVKLWNAV--ETDTQHETIQ-----LLSDALCVAYK 100 (703)
Q Consensus 41 ~~l~gH~~~V~---------~l~~s--p~~dg~~-L~sgs~-Dg~V~iWd~~--~~~~~~~~~~-----~~~~V~~v~~s 100 (703)
+.+..|...+. ...|+ | ||+. |+.++. +..|.+|++. +......+.. +...+.+++|+
T Consensus 61 ~~l~~~~~~~~~~~~~~~~~~~~~~~SP--Dg~~~la~~~~~~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~s 138 (662)
T 3azo_A 61 ESALPAPWNVRNRVFEYSGFPWAGVPRP--AGGPLLVFTHFGDQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLL 138 (662)
T ss_dssp EESSCTTCCBCCCGGGTCCCCEEEECCS--SSSCEEEEEBTTTCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEE
T ss_pred ceeCCCCccccccccccCCccceeeeec--CCCeEEEEEECCCCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEEC
Confidence 66777776766 66676 9 9998 776654 4555556654 2034455554 45678899999
Q ss_pred cCCCEEEEEECC----------CeEEEEEcCC------CcEEEEEe-ccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108 101 PDGTEIVVATLD----------GQLIMFDVES------AAQVGSVE-ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA 163 (703)
Q Consensus 101 pdg~~las~s~d----------g~I~vwd~~~------~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp 163 (703)
|||+.|++++.+ ..|++||+.+ ++.. .+. .+. ..+..++|||
T Consensus 139 pDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~~~~~--------------------~~~~~~~~Sp 197 (662)
T 3azo_A 139 PERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELSDDAH--------------------RFVTGPRLSP 197 (662)
T ss_dssp TTTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESSCSCS--------------------SEECCCEECT
T ss_pred CCCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEEecCC--------------------CcccCceECC
Confidence 999999998877 5899999987 5443 232 221 2577889999
Q ss_pred CCCEEEEEecC--------CcEEEEECC-CCc--eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108 164 DGSCILAAGQS--------KYICIYSSR-EGI--LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV 232 (703)
Q Consensus 164 dg~~l~s~s~d--------g~I~lwD~~-~~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 232 (703)
||++|+.++.+ ..|++||+. ++. ....+... +...+..++|+|||+.++++..+ +...
T Consensus 198 DG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~-------~~~~~~~~~~spdg~l~~~~~~~----~~~~ 266 (662)
T 3azo_A 198 DGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG-------PEEAIAQAEWAPDGSLIVATDRT----GWWN 266 (662)
T ss_dssp TSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE-------TTBCEEEEEECTTSCEEEEECTT----SSCE
T ss_pred CCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC-------CCceEcceEECCCCeEEEEECCC----CCeE
Confidence 99999987755 379999999 562 22233221 12367889999999955444332 2246
Q ss_pred EECCCCCCCccceeecCCccc--------eEEEEEcCCCCEEEEEeCCC-EEEE--EcCCCc
Q psy7108 233 LKLPGVKKGDMAARVLKPEVR--------VFCVKFSPTGQAWVAATTEG-VHIY--SLDSGY 283 (703)
Q Consensus 233 i~iwd~~~~~~~~~~~~h~~~--------V~~l~~spdg~~l~s~s~Dg-v~iw--d~~~~~ 283 (703)
|.+||..+++.......+... +.+++|+|+++.+++++. + ++|| ++.+++
T Consensus 267 l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d~~~~~ 327 (662)
T 3azo_A 267 LHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILDPESGE 327 (662)
T ss_dssp EEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEETTTTE
T ss_pred EEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEECCCCc
Confidence 888888777654433333222 567899999999999988 8 7888 555554
No 141
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.75 E-value=1.4e-17 Score=181.81 Aligned_cols=198 Identities=10% Similarity=0.004 Sum_probs=149.0
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCC----------ce-----eEEEecCCCcEEEEEEecCCCEEE----
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVET----------DT-----QHETIQLLSDALCVAYKPDGTEIV---- 107 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~----------~~-----~~~~~~~~~~V~~v~~spdg~~la---- 107 (703)
...++.+++++ ++.++++++.|+ +++|+.... .. ......+...|.+++|+|+|++|+
T Consensus 36 ~~~~n~lavs~--~~~~l~~~~~dg-v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~lav~~~ 112 (434)
T 2oit_A 36 KERSSLLAVSN--KYGLVFAGGASG-LQIFPTKNLLIQNKPGDDPNKIVDKVQGLLVPMKFPIHHLALSCDNLTLSACMM 112 (434)
T ss_dssp CSCCBCEEEET--TTTEEEEEETTE-EEEEEHHHHCCCCCTTCCTTCEEECCCCEEECCSSCEEEEEECTTSCEEEEEEE
T ss_pred CCCccEEEEec--CCCEEEEECCCE-EEEEEchHhhhhcccccCcccccccCccccccCCCcccEEEEcCCCCEEEEEEe
Confidence 34688999999 899999999988 889875311 01 112234667899999999999999
Q ss_pred EEECCCeEEEEEcCCC--------cE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCC
Q psy7108 108 VATLDGQLIMFDVESA--------AQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSK 175 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~--------~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg 175 (703)
+++.|+.|++||++++ +. ...+.+ |...|.+++|+|+ +++|++++.|+
T Consensus 113 sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~--------------------h~~~V~~v~~~p~~~~~las~s~Dg 172 (434)
T 2oit_A 113 SSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKD--------------------AGGMVIDMKWNPTVPSMVAVCLADG 172 (434)
T ss_dssp ETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCS--------------------GGGSEEEEEECSSCTTEEEEEETTS
T ss_pred ccCCCceEEEEEccccccCCcCCcceeeeeeccCC--------------------CCCceEEEEECCCCCCEEEEEECCC
Confidence 7788999999998754 11 222222 4458999999998 88999999999
Q ss_pred cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC------
Q psy7108 176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK------ 249 (703)
Q Consensus 176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~------ 249 (703)
+|++||++++........ |...+.+++|+|+|+++++++.++ .|++||.+ ++....+..
T Consensus 173 ~v~iwD~~~~~~~~~~~~--------~~~~v~~v~wspdg~~lasgs~dg------~v~iwd~~-~~~~~~~~~~~~~~~ 237 (434)
T 2oit_A 173 SIAVLQVTETVKVCATLP--------STVAVTSVCWSPKGKQLAVGKQNG------TVVQYLPT-LQEKKVIPCPPFYES 237 (434)
T ss_dssp CEEEEEESSSEEEEEEEC--------GGGCEEEEEECTTSSCEEEEETTS------CEEEECTT-CCEEEEECCCTTCCT
T ss_pred eEEEEEcCCCcceeeccC--------CCCceeEEEEcCCCCEEEEEcCCC------cEEEEccC-CcccccccCCcccCC
Confidence 999999998866544432 445899999999999999988764 89999998 544444333
Q ss_pred -CccceEEEEEcCCCCEEEEEe-CC------C-EEEEEcCCC
Q psy7108 250 -PEVRVFCVKFSPTGQAWVAAT-TE------G-VHIYSLDSG 282 (703)
Q Consensus 250 -h~~~V~~l~~spdg~~l~s~s-~D------g-v~iwd~~~~ 282 (703)
|...|.+++|++++.++++.+ .+ . +++|++...
T Consensus 238 ~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 238 DHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp TSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred CCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 234899999999988875433 33 1 789998754
No 142
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.74 E-value=2.1e-17 Score=192.65 Aligned_cols=261 Identities=11% Similarity=0.049 Sum_probs=170.2
Q ss_pred EEecCCceeeccCCCccccccccCCCc---CeEEEEEcCCCCCCEEEEEeCC---------CcEEEEEcCCCceeEEEec
Q psy7108 22 VLKLPGVKKGDMAARVLKPEVLSGHEG---PVSCIEFSPVLSSTGMVSASWD---------KTVKLWNAVETDTQHETIQ 89 (703)
Q Consensus 22 ~i~~~~v~~~d~tg~~~~~~~l~gH~~---~V~~l~~sp~~dg~~L~sgs~D---------g~V~iWd~~~~~~~~~~~~ 89 (703)
.+.+|++. +|++. ..+.+|.. .|.+++||| ||++|++++.+ +.+.+||+.+++. ..+..
T Consensus 38 ~i~~~d~~----~g~~~--~~~~~~~~~~~~v~~~~~Sp--Dg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~~ 108 (723)
T 1xfd_A 38 TVRLWNVE----TNTST--VLIEGKKIESLRAIRYEISP--DREYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLDP 108 (723)
T ss_dssp CEEEBCGG----GCCCE--EEECTTTTTTTTCSEEEECT--TSSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECCC
T ss_pred CEEEEECC----CCcEE--EEeccccccccccceEEECC--CCCEEEEEecCccceeecceeeEEEEECCCCce-EeccC
Confidence 34444443 67766 67777765 499999999 99999999875 6788999988754 33332
Q ss_pred ---CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108 90 ---LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS 166 (703)
Q Consensus 90 ---~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~ 166 (703)
+...+.+++|||||+.||+++. +.|++||+.+++.......+..-.......+. ... ..-.+.+.+++|+|||+
T Consensus 109 ~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~-v~~-ee~~~~~~~~~~SpDg~ 185 (723)
T 1xfd_A 109 PEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDW-LYE-EEILKTHIAHWWSPDGT 185 (723)
T ss_dssp TTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCH-HHH-HTTSSSSEEEEECTTSS
T ss_pred CccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccce-eEE-EEeccCcceEEECCCCC
Confidence 3334889999999999999875 79999999998876655443210000000000 000 00011347899999999
Q ss_pred EEEEEecCC----------------------------------cEEEEECCCCceEEEEEeccCCccccccccceeeeec
Q psy7108 167 CILAAGQSK----------------------------------YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT 212 (703)
Q Consensus 167 ~l~s~s~dg----------------------------------~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 212 (703)
.|++++.|+ .|++||+.+++....+..+. ....+...+.+++||
T Consensus 186 ~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~~~~~~~l~~~~--~~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 186 RLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNGPTHDLEMMPPD--DPRMREYYITMVKWA 263 (723)
T ss_dssp EEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSSSCCCEECCCCC--CGGGSSEEEEEEEES
T ss_pred EEEEEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCCCceeEEeeCCc--cCCCccceeEEEEEe
Confidence 999887543 78999998887545544321 112224578899999
Q ss_pred cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-Cccce----EEEEEcCCCCEEEEE--eCCC-------EEEEE
Q psy7108 213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRV----FCVKFSPTGQAWVAA--TTEG-------VHIYS 278 (703)
Q Consensus 213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V----~~l~~spdg~~l~s~--s~Dg-------v~iwd 278 (703)
|||+.+++....+ .....|++||+.+++....... +...+ ..++|||||+.|+.. ..++ |.+|+
T Consensus 264 pDg~~l~~~~~~~--~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~l~~~d 341 (723)
T 1xfd_A 264 TSTKVAVTWLNRA--QNVSILTLCDATTGVCTKKHEDESEAWLHRQNEEPVFSKDGRKFFFIRAIPQGGRGKFYHITVSS 341 (723)
T ss_dssp SSSEEEEEEEETT--SCEEEEEEEETTTCCEEEEEEEECSSCCCCCCCCCEECTTSCSEEEEEEECCSSSSCEEEEEEEC
T ss_pred CCCeEEEEEEcCC--CCeEEEEEEeCCCCcceEEEEeccCCEEeccCCCceEcCCCCeEEEEEecccCCCcceeEEEEEe
Confidence 9999876655432 2346899999999876655433 33333 378999999987653 3443 66777
Q ss_pred -cCCCce--ecce------ee-eEEEccch
Q psy7108 279 -LDSGYV--FDPF------LL-DISITPQS 298 (703)
Q Consensus 279 -~~~~~~--~~~~------~~-~~~~spd~ 298 (703)
..++.. ...+ .. .++|+||+
T Consensus 342 ~~~~~~~~~~~~l~~~~~~~~~~~~~spdg 371 (723)
T 1xfd_A 342 SQPNSSNDNIQSITSGDWDVTKILAYDEKG 371 (723)
T ss_dssp SSCCSSSCCCCBSCCSSSCEEEEEEEETTT
T ss_pred ccCCCCccceeEeecCCeEEEeeeEEcCCC
Confidence 344440 1111 11 26899999
No 143
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.74 E-value=7.4e-17 Score=168.61 Aligned_cols=219 Identities=16% Similarity=0.182 Sum_probs=162.5
Q ss_pred CCCccccccccC-CCc-CeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEec-C----CCcEEEEEEecCCCE
Q psy7108 34 AARVLKPEVLSG-HEG-PVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQ-L----LSDALCVAYKPDGTE 105 (703)
Q Consensus 34 tg~~~~~~~l~g-H~~-~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~-~----~~~V~~v~~spdg~~ 105 (703)
+++.+ ..+.. +.. .+.+++|+| +++.+ ++++.++.|.+||+.+++....+.. + ...+.+++|+|+|+.
T Consensus 20 ~~~~~--~~~~~~~~~~~~~~~~~s~--dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~ 95 (337)
T 1pby_B 20 KMAVD--KVITIADAGPTPMVPMVAP--GGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEERVKSLFGAALSPDGKT 95 (337)
T ss_dssp TTEEE--EEEECTTCTTCCCCEEECT--TSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEEEECTTCEEECTTSSE
T ss_pred CCcEE--EEEEcCCCCCCccceEEcC--CCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccccccccceEECCCCCE
Confidence 56666 55542 222 478999999 98765 5566788999999988865544332 2 115678999999999
Q ss_pred EEEEE------------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108 106 IVVAT------------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ 173 (703)
Q Consensus 106 las~s------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~ 173 (703)
+++++ .++.|.+||+.+++....+.... .+.+++|+|||++|+++
T Consensus 96 l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~---------------------~~~~~~~s~dg~~l~~~-- 152 (337)
T 1pby_B 96 LAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPR---------------------QITMLAWARDGSKLYGL-- 152 (337)
T ss_dssp EEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCS---------------------SCCCEEECTTSSCEEEE--
T ss_pred EEEEecccccccccccccCceEEEEECCCCcEEEEEeCCC---------------------CcceeEECCCCCEEEEe--
Confidence 98886 57999999999998877766432 46678999999988887
Q ss_pred CCcEEEEECCCCceEEEEEeccC-Cc----cc------------------------------------------------
Q psy7108 174 SKYICIYSSREGILLKKFTITQN-KS----LD------------------------------------------------ 200 (703)
Q Consensus 174 dg~I~lwD~~~~~~~~~~~~~~~-~~----~~------------------------------------------------ 200 (703)
++.|.+||+.+++....+..... .. .+
T Consensus 153 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~ 232 (337)
T 1pby_B 153 GRDLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMA 232 (337)
T ss_dssp SSSEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEE
T ss_pred CCeEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCce
Confidence 68899999999887766654320 00 00
Q ss_pred -----cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-E
Q psy7108 201 -----GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-V 274 (703)
Q Consensus 201 -----~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v 274 (703)
.+...+.+++|+|+|+.++++ + ..|.+||+.+++....+..+ ..+.+++|+|+|+++++++.++ |
T Consensus 233 ~~~~~~~~~~~~~~~~s~dg~~l~~~--~------~~v~~~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~~~~~~i 303 (337)
T 1pby_B 233 MREVRIMDVFYFSTAVNPAKTRAFGA--Y------NVLESFDLEKNASIKRVPLP-HSYYSVNVSTDGSTVWLGGALGDL 303 (337)
T ss_dssp EEEEEECSSCEEEEEECTTSSEEEEE--E------SEEEEEETTTTEEEEEEECS-SCCCEEEECTTSCEEEEESBSSEE
T ss_pred EeecCCCCCceeeEEECCCCCEEEEe--C------CeEEEEECCCCcCcceecCC-CceeeEEECCCCCEEEEEcCCCcE
Confidence 001123468999999998887 2 27999999988776665533 4578999999999998888888 9
Q ss_pred EEEEcCCCceecce
Q psy7108 275 HIYSLDSGYVFDPF 288 (703)
Q Consensus 275 ~iwd~~~~~~~~~~ 288 (703)
.+||+.+++....+
T Consensus 304 ~v~d~~~~~~~~~~ 317 (337)
T 1pby_B 304 AAYDAETLEKKGQV 317 (337)
T ss_dssp EEEETTTCCEEEEE
T ss_pred EEEECcCCcEEEEE
Confidence 99999998776544
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.74 E-value=4.5e-16 Score=162.78 Aligned_cols=222 Identities=10% Similarity=0.140 Sum_probs=156.9
Q ss_pred ceeecc-CCCc-cccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC---cEEEEEcCCCceeEEEecCCCcEEEEEEecC
Q psy7108 28 VKKGDM-AARV-LKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK---TVKLWNAVETDTQHETIQLLSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~-tg~~-~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg---~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd 102 (703)
+..||. +++. . ..+..+..+..+++|+| ++++|+++..++ .|++||+.+++... .........+++|+||
T Consensus 64 i~~~d~~~~~~~~--~~~~~~~~~~~~~~~s~--dg~~l~~~~~~~~~~~i~v~d~~~~~~~~-~~~~~~~~~~~~~spd 138 (331)
T 3u4y_A 64 LVQIETQLEPPKV--VAIQEGQSSMADVDITP--DDQFAVTVTGLNHPFNMQSYSFLKNKFIS-TIPIPYDAVGIAISPN 138 (331)
T ss_dssp EEEEECSSSSCEE--EEEEECSSCCCCEEECT--TSSEEEECCCSSSSCEEEEEETTTTEEEE-EEECCTTEEEEEECTT
T ss_pred EEEEECCCCceeE--EecccCCCCccceEECC--CCCEEEEecCCCCcccEEEEECCCCCeEE-EEECCCCccceEECCC
Confidence 556663 5665 5 77777877777799999 999999555553 89999998875444 4555667899999999
Q ss_pred CCEEEEE-ECCCe-EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEE
Q psy7108 103 GTEIVVA-TLDGQ-LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICI 179 (703)
Q Consensus 103 g~~las~-s~dg~-I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~l 179 (703)
|++++++ ..++. |.+|+++....+.... ...+ ........++|+|||+++++++ .++.|.+
T Consensus 139 g~~l~~~~~~~~~~i~~~~~~~~g~~~~~~-~~~~---------------~~~~~~~~~~~spdg~~l~v~~~~~~~v~v 202 (331)
T 3u4y_A 139 GNGLILIDRSSANTVRRFKIDADGVLFDTG-QEFI---------------SGGTRPFNITFTPDGNFAFVANLIGNSIGI 202 (331)
T ss_dssp SSCEEEEEETTTTEEEEEEECTTCCEEEEE-EEEE---------------CSSSSEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred CCEEEEEecCCCceEEEEEECCCCcEeecC-Cccc---------------cCCCCccceEECCCCCEEEEEeCCCCeEEE
Confidence 9866554 55578 9999998654332221 1100 1123578999999999766554 6889999
Q ss_pred EECCCCce---EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCC----
Q psy7108 180 YSSREGIL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKP---- 250 (703)
Q Consensus 180 wD~~~~~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h---- 250 (703)
||+.+++. +..+... ..+..++|+|+|++++++...+ ..|.+||..+++. +..+..+
T Consensus 203 ~d~~~~~~~~~~~~~~~~---------~~~~~~~~spdg~~l~v~~~~~-----~~i~~~d~~~~~~~~~~~~~~~~~~~ 268 (331)
T 3u4y_A 203 LETQNPENITLLNAVGTN---------NLPGTIVVSRDGSTVYVLTEST-----VDVFNFNQLSGTLSFVKSFGHGLLID 268 (331)
T ss_dssp EECSSTTSCEEEEEEECS---------SCCCCEEECTTSSEEEEECSSE-----EEEEEEETTTTEEEEEEEEECCCCCC
T ss_pred EECCCCcccceeeeccCC---------CCCceEEECCCCCEEEEEEcCC-----CEEEEEECCCCceeeecccccccccC
Confidence 99999887 6655422 2567899999999887766532 4799999998866 2222211
Q ss_pred ccc---eEEEEEcCCCCEEEEEeCC-C-EEEEEcCCCce
Q psy7108 251 EVR---VFCVKFSPTGQAWVAATTE-G-VHIYSLDSGYV 284 (703)
Q Consensus 251 ~~~---V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~~~ 284 (703)
... ...++|+|||++|++++.+ + |.+|++.+...
T Consensus 269 ~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 307 (331)
T 3u4y_A 269 PRPLFGANQMALNKTETKLFISANISRELKVFTISGKVV 307 (331)
T ss_dssp CGGGTTCCCEEECTTSSEEEEEETTTTEEEEEETTSCEE
T ss_pred CCCcccccceEECCCCCEEEEecCCCCcEEEEEecCCcc
Confidence 222 3558999999998766654 4 99999986543
No 145
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.74 E-value=2.3e-16 Score=177.18 Aligned_cols=236 Identities=8% Similarity=0.017 Sum_probs=177.1
Q ss_pred EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc--CCCcEEEEEec
Q psy7108 54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV--ESAAQVGSVEA 131 (703)
Q Consensus 54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~--~~~~~~~~~~~ 131 (703)
+++| ++..+++++.|++|.+||..+++....+..+. .+.+++|+|||++|++++.|++|.+||+ .+++.+.++..
T Consensus 144 ~~~p--~~~~~vs~~~d~~V~v~D~~t~~~~~~i~~g~-~~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i~~ 220 (543)
T 1nir_A 144 DLDL--PNLFSVTLRDAGQIALVDGDSKKIVKVIDTGY-AVHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIKI 220 (543)
T ss_dssp CCCG--GGEEEEEEGGGTEEEEEETTTCCEEEEEECST-TEEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEEC
T ss_pred ccCC--CCEEEEEEcCCCeEEEEECCCceEEEEEecCc-ccceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEEec
Confidence 3889 89999999999999999999887665554333 3899999999999999999999999999 88888887775
Q ss_pred cccCCCCCCCCccchhhcccCCccEEEEEEcC----CCCEEEEEe-cCCcEEEEECCCCceEEEEEeccCC--cccccc-
Q psy7108 132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA----DGSCILAAG-QSKYICIYSSREGILLKKFTITQNK--SLDGIN- 203 (703)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp----dg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~--~~~~~~- 203 (703)
.. .+..++|+| ||+++++++ .+++|.+||..++++++++..+... ....+.
T Consensus 221 g~---------------------~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~ 279 (543)
T 1nir_A 221 GI---------------------EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPE 279 (543)
T ss_dssp CS---------------------EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESC
T ss_pred CC---------------------CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccC
Confidence 33 578999999 999999987 4899999999999999888753210 000011
Q ss_pred ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce-eecCCccceEEEEEcCCCCEEEEEe-CCC-EEEEEcC
Q psy7108 204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA-RVLKPEVRVFCVKFSPTGQAWVAAT-TEG-VHIYSLD 280 (703)
Q Consensus 204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~-~~~~h~~~V~~l~~spdg~~l~s~s-~Dg-v~iwd~~ 280 (703)
..+..+.++|++..++++...+ ..|.+||..+.+.+. ....+...+.+++|+|+|+++++++ .++ |.+||..
T Consensus 280 ~~v~~i~~s~~~~~~~vs~~~~-----g~i~vvd~~~~~~l~~~~i~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~ 354 (543)
T 1nir_A 280 PRVAAIIASHEHPEFIVNVKET-----GKVLLVNYKDIDNLTVTSIGAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSK 354 (543)
T ss_dssp CCEEEEEECSSSSEEEEEETTT-----TEEEEEECTTSSSCEEEEEECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETT
T ss_pred CceEEEEECCCCCEEEEEECCC-----CeEEEEEecCCCcceeEEeccCcCccCceECCCCCEEEEEecCCCeEEEEECC
Confidence 2678899999998877766542 389999988765543 1223455688899999999876655 455 9999999
Q ss_pred CCceecceee--------eEE-EccchhhhHhhcCC-cceEEEEEEecCc
Q psy7108 281 SGYVFDPFLL--------DIS-ITPQSVKEALADKD-YAKALMMSLKLNE 320 (703)
Q Consensus 281 ~~~~~~~~~~--------~~~-~spd~~~~~l~sg~-~~~~l~la~~l~~ 320 (703)
++++...+.. ... ++|++- .+++++. .++++.+ |+...
T Consensus 355 tg~l~~~i~~g~~ph~g~g~~~~~p~~g-~~~~s~~~~d~~V~v-~d~~~ 402 (543)
T 1nir_A 355 DRRLSALVDVGKTPHPGRGANFVHPKYG-PVWSTSHLGDGSISL-IGTDP 402 (543)
T ss_dssp TTEEEEEEECSSSBCCTTCEEEEETTTE-EEEEEEBSSSSEEEE-EECCT
T ss_pred CCeEEEeeccCCCCCCCCCcccCCCCCc-cEEEeccCCCceEEE-EEeCC
Confidence 9987654431 223 356631 4555554 4678877 77764
No 146
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.73 E-value=2.3e-18 Score=200.44 Aligned_cols=222 Identities=14% Similarity=0.092 Sum_probs=153.3
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCC-----cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe-----
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDK-----TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ----- 114 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg-----~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~----- 114 (703)
+|...+.+++||| ||++||.++.++ +|++||+.+++.......+ ..+.+++|+|||+.|++++.++.
T Consensus 122 ~~~~~~~~~~~SP--Dg~~la~~~~~~G~~~~~i~v~d~~tg~~~~~~~~~-~~~~~~~wspDg~~l~~~~~~~~~~~~~ 198 (710)
T 2xdw_A 122 DGTVALRGYAFSE--DGEYFAYGLSASGSDWVTIKFMKVDGAKELPDVLER-VKFSCMAWTHDGKGMFYNAYPQQDGKSD 198 (710)
T ss_dssp TSCEEEEEEEECT--TSSEEEEEEEETTCSCEEEEEEETTTTEEEEEEEEE-ECSCCEEECTTSSEEEEEECCCCSSCCS
T ss_pred CCCEEEEEEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCcccccC-cccceEEEEeCCCEEEEEEECCcccccc
Confidence 4556789999999 999999776543 8999999988654433332 23667999999999999988766
Q ss_pred -----------EEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-----CCc
Q psy7108 115 -----------LIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-----SKY 176 (703)
Q Consensus 115 -----------I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-----dg~ 176 (703)
|++|++.+++. ...+.... +...+..++|+|||++|+.++. +..
T Consensus 199 ~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~------------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~ 260 (710)
T 2xdw_A 199 GTETSTNLHQKLYYHVLGTDQSEDILCAEFPD------------------EPKWMGGAELSDDGRYVLLSIREGCDPVNR 260 (710)
T ss_dssp SSCCCCCCCCEEEEEETTSCGGGCEEEECCTT------------------CTTCEEEEEECTTSCEEEEEEECSSSSCCE
T ss_pred ccccccCCCCEEEEEECCCCcccceEEeccCC------------------CCeEEEEEEEcCCCCEEEEEEEccCCCccE
Confidence 99999988762 22222211 1225788999999999988764 568
Q ss_pred EEEEECCC------Cc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceee
Q psy7108 177 ICIYSSRE------GI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARV 247 (703)
Q Consensus 177 I~lwD~~~------~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~ 247 (703)
|++||+.+ +. ....+..+.. .+. ..|+|+|+.+++.+..+ .....|.+||+.+++. ...+
T Consensus 261 l~~~d~~~~~~~~~~~~~~~~l~~~~~--------~~~-~~~s~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l 329 (710)
T 2xdw_A 261 LWYCDLQQESNGITGILKWVKLIDNFE--------GEY-DYVTNEGTVFTFKTNRH--SPNYRLINIDFTDPEESKWKVL 329 (710)
T ss_dssp EEEEEGGGSSSSSCSSCCCEEEECSSS--------SCE-EEEEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEE
T ss_pred EEEEECcccccccCCccceEEeeCCCC--------cEE-EEEeccCCEEEEEECCC--CCCCEEEEEeCCCCCcccceec
Confidence 99999986 43 3444443322 222 25889999888776543 2235789999887642 3444
Q ss_pred cCCcc--ceEEEEEcCCCCEEEEEeCCC---EEEEEcCCCceecce------eeeEEEccch
Q psy7108 248 LKPEV--RVFCVKFSPTGQAWVAATTEG---VHIYSLDSGYVFDPF------LLDISITPQS 298 (703)
Q Consensus 248 ~~h~~--~V~~l~~spdg~~l~s~s~Dg---v~iwd~~~~~~~~~~------~~~~~~spd~ 298 (703)
..|.. .+.+++|++++..+++...++ |.+|++.+++....+ ...++++|++
T Consensus 330 ~~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~ 391 (710)
T 2xdw_A 330 VPEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKD 391 (710)
T ss_dssp ECCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTC
T ss_pred cCCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCCCC
Confidence 45543 688899998777888888888 567777666543322 2346677766
No 147
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.73 E-value=1.9e-18 Score=202.07 Aligned_cols=241 Identities=13% Similarity=0.101 Sum_probs=147.0
Q ss_pred eeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcE-------------
Q psy7108 29 KKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDA------------- 94 (703)
Q Consensus 29 ~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V------------- 94 (703)
.+||..+... ..+..|.+.+..++||| ||+.||.++ |+.|++|++.++....... ++...+
T Consensus 95 ~~~d~~~~~~--~~l~~~~~~~~~~~~SP--dG~~la~~~-~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~ 169 (740)
T 4a5s_A 95 DIYDLNKRQL--ITEERIPNNTQWVTWSP--VGHKLAYVW-NNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEV 169 (740)
T ss_dssp EEEETTTTEE--CCSSCCCTTEEEEEECS--STTCEEEEE-TTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHT
T ss_pred EEEECCCCcE--EEcccCCCcceeeEECC--CCCEEEEEE-CCeEEEEECCCCceEEEcCCCCccceecCcccccccchh
Confidence 3677555545 57888889999999999 999999985 6899999998775332222 122222
Q ss_pred ----EEEEEecCCCEEEEEECCCe------------------------------------EEEEEcCC---Cc--EEEEE
Q psy7108 95 ----LCVAYKPDGTEIVVATLDGQ------------------------------------LIMFDVES---AA--QVGSV 129 (703)
Q Consensus 95 ----~~v~~spdg~~las~s~dg~------------------------------------I~vwd~~~---~~--~~~~~ 129 (703)
.++.|||||+.||.++.|.+ |++||+.+ ++ ....+
T Consensus 170 ~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~~~~~l 249 (740)
T 4a5s_A 170 FSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNATSIQI 249 (740)
T ss_dssp SSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCCCEEEE
T ss_pred cCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcceEEEe
Confidence 34899999999998865432 44455544 31 11111
Q ss_pred eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEEEECCCCc----eEE--EEEeccCCcc
Q psy7108 130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICIYSSREGI----LLK--KFTITQNKSL 199 (703)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~lwD~~~~~----~~~--~~~~~~~~~~ 199 (703)
... .....+...+..++|+|||+.++.... +..|.+||+.+++ +.. .+..
T Consensus 250 ~~~--------------~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~~~~~~~~~~~l~~------ 309 (740)
T 4a5s_A 250 TAP--------------ASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESSGRWNCLVARQHIE------ 309 (740)
T ss_dssp CCC--------------HHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTTTEEEECGGGCEEE------
T ss_pred cCC--------------ccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCccccceeEEEEeee------
Confidence 110 000124557899999999997765432 2369999999887 221 1100
Q ss_pred ccccccce-----eeeeccCCCEEE-EEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE-EEeC-
Q psy7108 200 DGINDFIN-----RRKMTEFGNVSL-IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV-AATT- 271 (703)
Q Consensus 200 ~~~~~~v~-----~~~~spdg~~l~-~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~-s~s~- 271 (703)
.++..++. .++|+|||+.++ ..+.. ++...|.+||..+++... +......+..+. .+|++.++ +++.
T Consensus 310 ~~~~~~v~~~~~~~p~fspDG~~l~~~~s~~---~G~~~l~~~~~~~~~~~~-lT~g~~~v~~~~-~~d~~~i~f~~~~~ 384 (740)
T 4a5s_A 310 MSTTGWVGRFRPSEPHFTLDGNSFYKIISNE---EGYRHICYFQIDKKDCTF-ITKGTWEVIGIE-ALTSDYLYYISNEY 384 (740)
T ss_dssp ECSSSCSSSSSCCCCEECTTSSEEEEEEECT---TSCEEEEEEETTCSSCEE-SCCSSSCEEEEE-EECSSEEEEEESCG
T ss_pred ccCCceEccCcCCCceEcCCCCEEEEEEEcC---CCceEEEEEECCCCceEe-cccCCEEEEEEE-EEeCCEEEEEEecC
Confidence 11222333 689999999877 44432 345789999998776554 444455566654 24566664 4443
Q ss_pred -C--C-EEEEE--cCCCce---ec-------ceeeeEEEccchh
Q psy7108 272 -E--G-VHIYS--LDSGYV---FD-------PFLLDISITPQSV 299 (703)
Q Consensus 272 -D--g-v~iwd--~~~~~~---~~-------~~~~~~~~spd~~ 299 (703)
+ + ..||. +.++.. +. ......+|+|++.
T Consensus 385 ~~~~~~~~ly~v~~~g~~~~~~lt~~~~~~~~~~~~~~~S~dg~ 428 (740)
T 4a5s_A 385 KGMPGGRNLYKIQLIDYTKVTCLSCELNPERCQYYSVSFSKEAK 428 (740)
T ss_dssp GGCTTCBEEEEEETTEEEEEEESSTTTSTTTBCBEEEEECTTSS
T ss_pred CCCCceeEEEEEECCCCCcceeeccccCCCCCceEEEEECCCCC
Confidence 2 2 45554 443322 11 1234678899883
No 148
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=1.2e-16 Score=174.37 Aligned_cols=212 Identities=11% Similarity=0.105 Sum_probs=150.7
Q ss_pred CCCcCeEEEEEcCCCCCCEEE----EEeCCCcEEEEEcCCC--------ce---eEEEecCCCcEEEEEEecC-CCEEEE
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMV----SASWDKTVKLWNAVET--------DT---QHETIQLLSDALCVAYKPD-GTEIVV 108 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~----sgs~Dg~V~iWd~~~~--------~~---~~~~~~~~~~V~~v~~spd-g~~las 108 (703)
.|.+.|++++|+| ++++|+ +|+.|++|++||+.+. +. ......|...|.+++|+|+ +.+|++
T Consensus 90 ~~~~~v~~l~~sp--dg~~lav~~~sgs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las 167 (434)
T 2oit_A 90 PMKFPIHHLALSC--DNLTLSACMMSSEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAV 167 (434)
T ss_dssp CCSSCEEEEEECT--TSCEEEEEEEETTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEE
T ss_pred cCCCcccEEEEcC--CCCEEEEEEeccCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEE
Confidence 3567899999999 999999 8889999999998654 11 2223348889999999998 789999
Q ss_pred EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceE
Q psy7108 109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILL 188 (703)
Q Consensus 109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~ 188 (703)
++.||+|++||++++.......+|.. .|.+++|+|+|++|++|+.|++|++||++ ++..
T Consensus 168 ~s~Dg~v~iwD~~~~~~~~~~~~~~~--------------------~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~ 226 (434)
T 2oit_A 168 CLADGSIAVLQVTETVKVCATLPSTV--------------------AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEK 226 (434)
T ss_dssp EETTSCEEEEEESSSEEEEEEECGGG--------------------CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEE
T ss_pred EECCCeEEEEEcCCCcceeeccCCCC--------------------ceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cccc
Confidence 99999999999999876655555443 89999999999999999999999999998 6666
Q ss_pred EEEEeccCCccccccccceeeeeccCCCEEEEEcc-cCCCCCeeEEECCCCCCCccc-----eeec-------CCccceE
Q psy7108 189 KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR-ETHEGGNVVLKLPGVKKGDMA-----ARVL-------KPEVRVF 255 (703)
Q Consensus 189 ~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~-~~~~~~~~~i~iwd~~~~~~~-----~~~~-------~h~~~V~ 255 (703)
..+..+... ...+...+.+++|++++.++++.+. +|..+....+++|++++.+.. ..+. ....+..
T Consensus 227 ~~~~~~~~~-~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~~~~~~~~~~~~~~~~~~~~~~r~~~~ 305 (434)
T 2oit_A 227 KVIPCPPFY-ESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKKEEKHPEIFVNFMEPCYGSCTERQHHY 305 (434)
T ss_dssp EEECCCTTC-CTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCTTTCCCCEEEECCCSSCCCCSSSCCCE
T ss_pred ccccCCccc-CCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccCCCCCCcceEecccCCCCCCCCcCcce
Confidence 665543321 1123347899999998887755443 222233346889988765211 1111 1111222
Q ss_pred EEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108 256 CVKFSPTGQAWVAATTEG--VHIYSLD 280 (703)
Q Consensus 256 ~l~~spdg~~l~s~s~Dg--v~iwd~~ 280 (703)
.+.+-++.+.+++++... |.|....
T Consensus 306 ~~~~l~dw~l~~v~s~~s~dv~vl~~~ 332 (434)
T 2oit_A 306 YLSYIEEWDLVLAASAASTEVSILARQ 332 (434)
T ss_dssp EEEEEGGGTEEEEEETTCSBCEEEEEC
T ss_pred eeehhccCCEEEEecCCCCceeEEEec
Confidence 333447778876666554 7666644
No 149
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.72 E-value=7.4e-16 Score=162.59 Aligned_cols=220 Identities=13% Similarity=0.123 Sum_probs=146.7
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEE--ecCC----------CcEEEEEEecCCCEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHET--IQLL----------SDALCVAYKPDGTEIV 107 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~--~~~~----------~~V~~v~~spdg~~la 107 (703)
..+..|...+..++|+| +|++|++++ .+++|++|++......... ..+. ..+.+++|+|||+.++
T Consensus 79 ~~~~~~~~~p~~~a~sp--dg~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v 156 (347)
T 3hfq_A 79 NTVVAPGTPPAYVAVDE--ARQLVYSANYHKGTAEVMKIAADGALTLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAV 156 (347)
T ss_dssp EEEEEESCCCSEEEEET--TTTEEEEEETTTTEEEEEEECTTSCEEEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEE
T ss_pred eeeecCCCCCEEEEECC--CCCEEEEEeCCCCEEEEEEeCCCCCeeecceeecCCCCCCccccCCCceEEEECCCCcEEE
Confidence 44455778899999999 999888887 7799999999643322222 2221 2488999999999656
Q ss_pred EEECCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCC-
Q psy7108 108 VATLDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSRE- 184 (703)
Q Consensus 108 s~s~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~- 184 (703)
+...++.|.+||+. +++.......... .+.....++|+|||++++++ ..++.|.+|++..
T Consensus 157 ~~~~~~~v~~~~~~~~g~~~~~~~~~~~-----------------~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 157 IDLGSDKVYVYNVSDAGQLSEQSVLTME-----------------AGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECC-----------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred EeCCCCEEEEEEECCCCcEEEeeeEEcC-----------------CCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 66668899999998 5543322111100 01256789999999977664 5678999999874
Q ss_pred -CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-C--ccceeecCCccceEEEEEc
Q psy7108 185 -GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-G--DMAARVLKPEVRVFCVKFS 260 (703)
Q Consensus 185 -~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~--~~~~~~~~h~~~V~~l~~s 260 (703)
++............-......+..++|+|||++++++...+ ..|.+|++.. + +.+..+..+...+.+++|+
T Consensus 220 ~g~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~-----~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~s 294 (347)
T 3hfq_A 220 TGAFTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGY-----NTLAVFAVTADGHLTLIQQISTEGDFPRDFDLD 294 (347)
T ss_dssp TTEEEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETT-----TEEEEEEECGGGCEEEEEEEECSSSCCCEEEEC
T ss_pred CCceEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCC-----CEEEEEEECCCCcEEEeEEEecCCCCcCeEEEC
Confidence 54322211111100000113577899999999887665432 3799999863 2 3444455556678899999
Q ss_pred CCCCEEEEEeCC-C-EEEEEc--CCCce
Q psy7108 261 PTGQAWVAATTE-G-VHIYSL--DSGYV 284 (703)
Q Consensus 261 pdg~~l~s~s~D-g-v~iwd~--~~~~~ 284 (703)
|||++|++++.+ + +.+|++ .+++.
T Consensus 295 pdg~~l~v~~~~~~~v~v~~~d~~tg~l 322 (347)
T 3hfq_A 295 PTEAFVVVVNQNTDNATLYARDLTSGKL 322 (347)
T ss_dssp TTSSEEEEEETTTTEEEEEEECTTTCCE
T ss_pred CCCCEEEEEEcCCCcEEEEEEeCCCCeE
Confidence 999999888765 5 999955 45554
No 150
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.72 E-value=6.4e-16 Score=161.84 Aligned_cols=213 Identities=9% Similarity=0.113 Sum_probs=145.2
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCc--eeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETD--TQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLI 116 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~--~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~ 116 (703)
..+..+. .+.+++|+| ++++|++++. ++.|.+||+.++. ...........+.+++|+|+|+.+++++ .++.|.
T Consensus 78 ~~~~~~~-~~~~~~~s~--dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~ 154 (343)
T 1ri6_A 78 AESALPG-SLTHISTDH--QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRIC 154 (343)
T ss_dssp EEEECSS-CCSEEEECT--TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEE
T ss_pred cccccCC-CCcEEEEcC--CCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEE
Confidence 3444444 789999999 9998876654 8899999995332 2233344556789999999999888887 899999
Q ss_pred EEEcCC-CcEEEEE----eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCC--Cce-
Q psy7108 117 MFDVES-AAQVGSV----EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSRE--GIL- 187 (703)
Q Consensus 117 vwd~~~-~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~--~~~- 187 (703)
+||+.+ ++..... ..+ .+..+..++|+|+++++++++ .++.|.+||+.. ++.
T Consensus 155 ~~d~~~~~~~~~~~~~~~~~~-------------------~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~ 215 (343)
T 1ri6_A 155 LFTVSDDGHLVAQDPAEVTTV-------------------EGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIE 215 (343)
T ss_dssp EEEECTTSCEEEEEEEEEECS-------------------TTCCEEEEEECTTSSEEEEEETTTTEEEEEESSCTTSCCE
T ss_pred EEEecCCCceeeecccccccC-------------------CCCCcceEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEE
Confidence 999987 6543222 111 122678899999999776654 789999999953 433
Q ss_pred -EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CC--ccceeecCCccceEEEEEcCC
Q psy7108 188 -LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KG--DMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 188 -~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~--~~~~~~~~h~~~V~~l~~spd 262 (703)
......... .......+..++|+|+|+.++++...+ ..+.+||+. ++ +.+..+..+.. +.+++|+|+
T Consensus 216 ~~~~~~~~~~--~~~~~~~~~~i~~s~dg~~l~v~~~~~-----~~i~v~d~~~~~~~~~~~~~~~~~~~-~~~~~~s~d 287 (343)
T 1ri6_A 216 CVQTLDMMPE--NFSDTRWAADIHITPDGRHLYACDRTA-----SLITVFSVSEDGSVLSKEGFQPTETQ-PRGFNVDHS 287 (343)
T ss_dssp EEEEEECSCT--TCCSCCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTSCCEEEEEEEECSSS-CCCEEECTT
T ss_pred EEeeccccCc--cccccCCccceEECCCCCEEEEEecCC-----CEEEEEEEcCCCCceEEeeeecCCCc-cceEEECCC
Confidence 222221110 001123456799999999888665432 379999987 32 33333444433 889999999
Q ss_pred CCEEEEEe-CCC-EEEEEcC--CCc
Q psy7108 263 GQAWVAAT-TEG-VHIYSLD--SGY 283 (703)
Q Consensus 263 g~~l~s~s-~Dg-v~iwd~~--~~~ 283 (703)
|++|++++ .++ +.+|+++ +++
T Consensus 288 g~~l~~~~~~~~~v~v~~~d~~~g~ 312 (343)
T 1ri6_A 288 GKYLIAAGQKSHHISVYEIVGEQGL 312 (343)
T ss_dssp SSEEEEECTTTCEEEEEEEETTTTE
T ss_pred CCEEEEecCCCCeEEEEEEcCCCce
Confidence 99988887 466 9999554 554
No 151
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.72 E-value=7.1e-16 Score=162.74 Aligned_cols=258 Identities=10% Similarity=0.117 Sum_probs=163.4
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC---CCcEEEEEcCCCce--eEEEecCCCcEEEEEEecCCCEEEE
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW---DKTVKLWNAVETDT--QHETIQLLSDALCVAYKPDGTEIVV 108 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~---Dg~V~iWd~~~~~~--~~~~~~~~~~V~~v~~spdg~~las 108 (703)
+|++. ......+......++|+| +|+ |++++. ++.|++|++.++.. ......+...+..++|+|||++|++
T Consensus 27 tg~~~-~~~~~~~~~~p~~~a~sp--dg~-l~~~~~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~ 102 (347)
T 3hfq_A 27 AKTLT-NDGLLAATQNPTYLALSA--KDC-LYSVDKEDDEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYS 102 (347)
T ss_dssp TTEEE-EEEEEEECSCCCCEEECT--TCE-EEEEEEETTEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEE
T ss_pred CCeEE-EeeeeeccCCcceEEEcc--CCe-EEEEEecCCCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEE
Confidence 55543 112344567788899999 998 555543 68999999976642 2233446778899999999999988
Q ss_pred EE-CCCeEEEEEcCC-Cc--EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC-
Q psy7108 109 AT-LDGQLIMFDVES-AA--QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR- 183 (703)
Q Consensus 109 ~s-~dg~I~vwd~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~- 183 (703)
++ .++.|.+||+.. +. .+..+..... +. . .......+.+++|+|||+.+++...++.|.+||+.
T Consensus 103 ~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~---~p---~-----~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~ 171 (347)
T 3hfq_A 103 ANYHKGTAEVMKIAADGALTLTDTVQHSGH---GP---R-----PEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSD 171 (347)
T ss_dssp EETTTTEEEEEEECTTSCEEEEEEEECCCC---CS---S-----TTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECT
T ss_pred EeCCCCEEEEEEeCCCCCeeecceeecCCC---CC---C-----ccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECC
Confidence 88 678999999963 33 2222221110 00 0 01123358899999999955566678899999998
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC--Ccc--ceeecCCc------cc
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK--GDM--AARVLKPE------VR 253 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~--~~~--~~~~~~h~------~~ 253 (703)
+++.......... .......++|+|||++++++...+ ..+.+|++.. ++. ........ ..
T Consensus 172 ~g~~~~~~~~~~~-----~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 241 (347)
T 3hfq_A 172 AGQLSEQSVLTME-----AGFGPRHLVFSPDGQYAFLAGELS-----SQIASLKYDTQTGAFTQLGIVKTIPADYTAHNG 241 (347)
T ss_dssp TSCEEEEEEEECC-----TTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEEETTTTEEEEEEEEESSCTTCCSCCE
T ss_pred CCcEEEeeeEEcC-----CCCCCceEEECCCCCEEEEEeCCC-----CEEEEEEecCCCCceEEeeeeeecCCCCCCCCc
Confidence 5543322111110 112456799999999777765432 3788898764 432 22222211 45
Q ss_pred eEEEEEcCCCCEEE-EEeCCC-EEEEEcCCC---ceecc------eeeeEEEccchhhhHhhcCC-cceEEEEEEecC
Q psy7108 254 VFCVKFSPTGQAWV-AATTEG-VHIYSLDSG---YVFDP------FLLDISITPQSVKEALADKD-YAKALMMSLKLN 319 (703)
Q Consensus 254 V~~l~~spdg~~l~-s~s~Dg-v~iwd~~~~---~~~~~------~~~~~~~spd~~~~~l~sg~-~~~~l~la~~l~ 319 (703)
+..++|+|||++|+ +...++ |.+|+++.. +.... ....++|+|++ ..+...+ .++.+.+ |+++
T Consensus 242 ~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg--~~l~v~~~~~~~v~v-~~~d 316 (347)
T 3hfq_A 242 AAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTE--AFVVVVNQNTDNATL-YARD 316 (347)
T ss_dssp EEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTS--SEEEEEETTTTEEEE-EEEC
T ss_pred ceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCC--CEEEEEEcCCCcEEE-EEEe
Confidence 88999999999884 555567 999998732 22221 23568999999 5444443 3466666 6554
No 152
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.71 E-value=2.8e-16 Score=160.33 Aligned_cols=213 Identities=12% Similarity=0.096 Sum_probs=150.9
Q ss_pred ceeecc-C-CCccccccccCC-CcCeEEEEEcCCCCCCEEEEEe--CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC
Q psy7108 28 VKKGDM-A-ARVLKPEVLSGH-EGPVSCIEFSPVLSSTGMVSAS--WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~-t-g~~~~~~~l~gH-~~~V~~l~~sp~~dg~~L~sgs--~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd 102 (703)
+.+||. + ++.. ....+| ...+.+++|+| ++++|++++ .++..+||.+...............+.+++|+||
T Consensus 64 i~~~d~~~~~~~~--~~~~~~~~~~~~~~~~sp--dg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~spd 139 (297)
T 2ojh_A 64 LYRLSLAGDPSPE--KVDTGFATICNNDHGISP--DGALYAISDKVEFGKSAIYLLPSTGGTPRLMTKNLPSYWHGWSPD 139 (297)
T ss_dssp EEEEESSSCCSCE--ECCCTTCCCBCSCCEECT--TSSEEEEEECTTTSSCEEEEEETTCCCCEECCSSSSEEEEEECTT
T ss_pred EEEEeCCCCCCce--EeccccccccccceEECC--CCCEEEEEEeCCCCcceEEEEECCCCceEEeecCCCccceEECCC
Confidence 556664 4 4555 555566 47899999999 999999998 4456666665422222333444456899999999
Q ss_pred CCEEE-EEECCCeEEEEEcC--CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEE
Q psy7108 103 GTEIV-VATLDGQLIMFDVE--SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYIC 178 (703)
Q Consensus 103 g~~la-s~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~ 178 (703)
++.|+ +++.++.+.+|+++ +++. ..+..+ ...+.+++|+|+|+.|++++ .++.+.
T Consensus 140 g~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~--------------------~~~~~~~~~s~dg~~l~~~~~~~~~~~ 198 (297)
T 2ojh_A 140 GKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHG--------------------EGRNDGPDYSPDGRWIYFNSSRTGQMQ 198 (297)
T ss_dssp SSEEEEEEEETTEEEEEEEETTTCCE-EECCCS--------------------SSCEEEEEECTTSSEEEEEECTTSSCE
T ss_pred CCEEEEEECCCCceEEEEEECCCCcc-eEcccC--------------------CCccccceECCCCCEEEEEecCCCCcc
Confidence 99887 67789999999864 3333 333332 23789999999999888766 588999
Q ss_pred EEECC-CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC-----CeeEEECCCCCCCccce--eecCC
Q psy7108 179 IYSSR-EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG-----GNVVLKLPGVKKGDMAA--RVLKP 250 (703)
Q Consensus 179 lwD~~-~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~-----~~~~i~iwd~~~~~~~~--~~~~h 250 (703)
+|++. .+.....+.. +...+.+++|+|+|+.+++.+.++... ....|.+||+.+++... ...+|
T Consensus 199 i~~~~~~~~~~~~~~~--------~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~ 270 (297)
T 2ojh_A 199 IWRVRVDGSSVERITD--------SAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGG 270 (297)
T ss_dssp EEEEETTSSCEEECCC--------CSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEES
T ss_pred EEEECCCCCCcEEEec--------CCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCC
Confidence 99886 4444444432 234778899999999988877643111 23579999998886533 33367
Q ss_pred ccceEEEEEcCCCCEEEEEeCCC
Q psy7108 251 EVRVFCVKFSPTGQAWVAATTEG 273 (703)
Q Consensus 251 ~~~V~~l~~spdg~~l~s~s~Dg 273 (703)
...+.+++|+|+|+.|++++.+.
T Consensus 271 ~~~~~~~~~spdg~~l~~~~~~~ 293 (297)
T 2ojh_A 271 QGTMNSPNWSPDGDEFAYVRYFP 293 (297)
T ss_dssp TTTSCSCCBCTTSSEEEEEEECC
T ss_pred CcccccceECCCCCEEEEEEecc
Confidence 78899999999999998877653
No 153
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.70 E-value=6.4e-18 Score=196.19 Aligned_cols=201 Identities=8% Similarity=-0.024 Sum_probs=135.0
Q ss_pred CCCcCeEEEEEcCCCCCCEEEE-----EeCCCcEEEEEcCCCcee-EEEecCCCcEEEEEEecCCCEEEEEECCCe----
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVS-----ASWDKTVKLWNAVETDTQ-HETIQLLSDALCVAYKPDGTEIVVATLDGQ---- 114 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~s-----gs~Dg~V~iWd~~~~~~~-~~~~~~~~~V~~v~~spdg~~las~s~dg~---- 114 (703)
+|...+.+++||| ||++||. |+.+.+|++||+.+++.. ...... .....++|+|||+.|++++.|..
T Consensus 118 ~~~~~~~~~~~SP--DG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~-~~~~~~~wspDg~~l~~~~~d~~~~~~ 194 (695)
T 2bkl_A 118 DGTVSLGTWAVSW--DGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEG-GKYATPKWTPDSKGFYYEWLPTDPSIK 194 (695)
T ss_dssp SSCEEEEEEEECT--TSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSC-CTTCCCEECTTSSEEEEEECCCCTTSC
T ss_pred CCCEEEEEEEECC--CCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCc-ccccceEEecCCCEEEEEEecCCCCCc
Confidence 5666899999999 9999984 444568999999988643 111111 11267999999999999988776
Q ss_pred ---------EEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----cEEE
Q psy7108 115 ---------LIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK----YICI 179 (703)
Q Consensus 115 ---------I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg----~I~l 179 (703)
|++|++.+++. ...+.... +...+..+.|+|||++|+.++.++ .|++
T Consensus 195 ~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~------------------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~ 256 (695)
T 2bkl_A 195 VDERPGYTTIRYHTLGTEPSKDTVVHERTG------------------DPTTFLQSDLSRDGKYLFVYILRGWSENDVYW 256 (695)
T ss_dssp GGGGGGGCEEEEEETTSCGGGCEEEECCCC------------------CTTCEEEEEECTTSCCEEEEEEETTTEEEEEE
T ss_pred cccCCCCCEEEEEECCCCchhceEEEecCC------------------CCEEEEEEEECCCCCEEEEEEeCCCCceEEEE
Confidence 99999988762 22232211 123688999999999998877665 6778
Q ss_pred EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecC-C-ccceE
Q psy7108 180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLK-P-EVRVF 255 (703)
Q Consensus 180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~-h-~~~V~ 255 (703)
||..++.. ..+..+.. .+....+ ++|. +++.+..+ ..+..|.+||+.+++. ...+.. + ...+.
T Consensus 257 ~~~~~~~~-~~l~~~~~--------~~~~~~~-~~g~-l~~~s~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~l~ 323 (695)
T 2bkl_A 257 KRPGEKDF-RLLVKGVG--------AKYEVHA-WKDR-FYVLTDEG--APRQRVFEVDPAKPARASWKEIVPEDSSASLL 323 (695)
T ss_dssp ECTTCSSC-EEEEECSS--------CCEEEEE-ETTE-EEEEECTT--CTTCEEEEEBTTBCSGGGCEEEECCCSSCEEE
T ss_pred EcCCCCce-EEeecCCC--------ceEEEEe-cCCc-EEEEECCC--CCCCEEEEEeCCCCCccCCeEEecCCCCCeEE
Confidence 87665543 33332222 3344444 6777 55554432 2235899999987753 233333 3 45688
Q ss_pred EEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108 256 CVKFSPTGQAWVAATTEG-VHIYSLD 280 (703)
Q Consensus 256 ~l~~spdg~~l~s~s~Dg-v~iwd~~ 280 (703)
+++|+ ++..+++...|+ .+||.++
T Consensus 324 ~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 324 SVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 89998 667778888888 6666544
No 154
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.70 E-value=7.9e-16 Score=161.70 Aligned_cols=230 Identities=10% Similarity=0.128 Sum_probs=164.9
Q ss_pred EEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC--cEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEE
Q psy7108 52 CIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS--DALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGS 128 (703)
Q Consensus 52 ~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~ 128 (703)
++++++ ++.++++++.+++|++||+.+++....+. ... .+..++|+|+|+.+++ +..++.|.+||+.+++....
T Consensus 4 g~~~~~--~~~~~v~~~~~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~ 80 (349)
T 1jmx_B 4 GPALKA--GHEYMIVTNYPNNLHVVDVASDTVYKSCV-MPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFH 80 (349)
T ss_dssp CCCCCT--TCEEEEEEETTTEEEEEETTTTEEEEEEE-CSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred cccccC--CCEEEEEeCCCCeEEEEECCCCcEEEEEe-cCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEE
Confidence 456777 88999999999999999998875544443 333 6789999999987654 44688999999999988777
Q ss_pred EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------------CcEEEEECCCCceE---EEEEe
Q psy7108 129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------------KYICIYSSREGILL---KKFTI 193 (703)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------------g~I~lwD~~~~~~~---~~~~~ 193 (703)
+...... ......+..++|+|||+++++++.+ +.|.+||+.+++.. ..+..
T Consensus 81 ~~~~~~~--------------~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 146 (349)
T 1jmx_B 81 ANLSSVP--------------GEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPM 146 (349)
T ss_dssp EESCCST--------------TEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEEC
T ss_pred EEccccc--------------ccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccC
Confidence 6542210 0001135679999999999998865 89999999885432 33321
Q ss_pred ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc----------------------
Q psy7108 194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE---------------------- 251 (703)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~---------------------- 251 (703)
...+.+++|+|+|+ +++.+. .+.+||..+++....+..+.
T Consensus 147 ---------~~~~~~~~~s~dg~-l~~~~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 208 (349)
T 1jmx_B 147 ---------PRQVYLMRAADDGS-LYVAGP--------DIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRH 208 (349)
T ss_dssp ---------CSSCCCEEECTTSC-EEEESS--------SEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTC
T ss_pred ---------CCcccceeECCCCc-EEEccC--------cEEEEeCCCCceeccccccccCCccccCccceeeecCCCcce
Confidence 12467889999999 555322 38899998887655443221
Q ss_pred ----------------------------------------------cceEEEEEcC-CCCEEEEEeCCC-EEEEEcCCCc
Q psy7108 252 ----------------------------------------------VRVFCVKFSP-TGQAWVAATTEG-VHIYSLDSGY 283 (703)
Q Consensus 252 ----------------------------------------------~~V~~l~~sp-dg~~l~s~s~Dg-v~iwd~~~~~ 283 (703)
..+.+++|+| +|++++++ ++ |.+||+.+++
T Consensus 209 ~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~~~ 286 (349)
T 1jmx_B 209 EFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQRK 286 (349)
T ss_dssp EEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTTTE
T ss_pred eEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECccCe
Confidence 1345678889 99999888 66 9999999987
Q ss_pred eecce-----eeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 284 VFDPF-----LLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 284 ~~~~~-----~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
....+ ...++|+|++ ..+..++.++.+.+ |+....
T Consensus 287 ~~~~~~~~~~~~~~~~s~dg--~~l~~~~~~~~v~v-~d~~~~ 326 (349)
T 1jmx_B 287 LIKAANLDHTYYCVAFDKKG--DKLYLGGTFNDLAV-FNPDTL 326 (349)
T ss_dssp EEEEEECSSCCCEEEECSSS--SCEEEESBSSEEEE-EETTTT
T ss_pred EEEEEcCCCCccceEECCCC--CEEEEecCCCeEEE-Eecccc
Confidence 65443 3568999998 44555566688887 887654
No 155
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.70 E-value=2e-15 Score=157.60 Aligned_cols=222 Identities=11% Similarity=0.128 Sum_probs=160.2
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEE-EECCCeEEEEEcCCCcEEEEEeccccCCC
Q psy7108 62 TGMVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVV-ATLDGQLIMFDVESAAQVGSVEARRDLDS 137 (703)
Q Consensus 62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las-~s~dg~I~vwd~~~~~~~~~~~~~~~~~~ 137 (703)
+++++++.+++|++||+.+++....+ .... .+.+++|+|+|+.+++ +..++.|.+||+.+++.+..+.....
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~-~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~--- 77 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVI-TIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTP--- 77 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEE-ECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBT---
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEE-EcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCc---
Confidence 57899999999999999888554444 3333 5889999999987654 45578999999999988877654210
Q ss_pred CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------------cCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108 138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------------QSKYICIYSSREGILLKKFTITQNKSLDGINDF 205 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~ 205 (703)
..+...+..++|+|+|+.+++++ .++.|.+||+.+++.+..+... ..
T Consensus 78 ------------~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~---------~~ 136 (337)
T 1pby_B 78 ------------EERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAP---------RQ 136 (337)
T ss_dssp ------------TEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECC---------SS
T ss_pred ------------ccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCC---------CC
Confidence 00011345789999999998886 5799999999998887766532 24
Q ss_pred ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------------------------------------
Q psy7108 206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL------------------------------------- 248 (703)
Q Consensus 206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~------------------------------------- 248 (703)
+..++|+|+|+.++++.. .+.+||+.+++....+.
T Consensus 137 ~~~~~~s~dg~~l~~~~~--------~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~ 208 (337)
T 1pby_B 137 ITMLAWARDGSKLYGLGR--------DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKD 208 (337)
T ss_dssp CCCEEECTTSSCEEEESS--------SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTT
T ss_pred cceeEECCCCCEEEEeCC--------eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccc
Confidence 567889999998777621 46777766654332221
Q ss_pred -----------------------------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce-----eeeEE
Q psy7108 249 -----------------------------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF-----LLDIS 293 (703)
Q Consensus 249 -----------------------------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~-----~~~~~ 293 (703)
.+...+.+++|+|||++++++ ++ |.+||+.+++....+ ...++
T Consensus 209 ~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~ 286 (337)
T 1pby_B 209 IDPADPTAYRTGLLTMDLETGEMAMREVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVN 286 (337)
T ss_dssp SCTTSGGGEEEEEEEEETTTCCEEEEEEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEE
T ss_pred cccccccccccceEEEeCCCCCceEeecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEE
Confidence 112235579999999999888 56 999999988765443 35689
Q ss_pred EccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 294 ITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 294 ~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
|+|++ ..+..+..++.+.+ |++...
T Consensus 287 ~s~dg--~~l~~~~~~~~i~v-~d~~~~ 311 (337)
T 1pby_B 287 VSTDG--STVWLGGALGDLAA-YDAETL 311 (337)
T ss_dssp ECTTS--CEEEEESBSSEEEE-EETTTC
T ss_pred ECCCC--CEEEEEcCCCcEEE-EECcCC
Confidence 99999 55555566788887 887654
No 156
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.69 E-value=8.1e-16 Score=161.62 Aligned_cols=224 Identities=13% Similarity=0.090 Sum_probs=158.6
Q ss_pred ceeec-cCCCccccccccCCC-cCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEEEecCC------CcEEEEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGHE-GPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHETIQLL------SDALCVA 98 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~~~~~~------~~V~~v~ 98 (703)
+.+|| .+++.+ ..+..+. ..+..++|+| +++.+ ++++.++.|.+||+.+++......... ..+.+++
T Consensus 23 v~~~d~~~~~~~--~~~~~~~~~~~~~~~~s~--dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~ 98 (349)
T 1jmx_B 23 LHVVDVASDTVY--KSCVMPDKFGPGTAMMAP--DNRTAYVLNNHYGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFA 98 (349)
T ss_dssp EEEEETTTTEEE--EEEECSSCCSSCEEEECT--TSSEEEEEETTTTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEE
T ss_pred EEEEECCCCcEE--EEEecCCCCCCceeEECC--CCCEEEEEeCCCCcEEEEeCCCCcEEEEEEcccccccccccccceE
Confidence 34455 366766 6665443 2578999999 99865 455678999999998876554443222 2377899
Q ss_pred EecCCCEEEEEECC------------CeEEEEEcCCCcEE---EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108 99 YKPDGTEIVVATLD------------GQLIMFDVESAAQV---GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA 163 (703)
Q Consensus 99 ~spdg~~las~s~d------------g~I~vwd~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp 163 (703)
|+|||+++++++.+ +.|.+||+.+++.. ..+... ..+.+++|+|
T Consensus 99 ~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~---------------------~~~~~~~~s~ 157 (349)
T 1jmx_B 99 ISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMP---------------------RQVYLMRAAD 157 (349)
T ss_dssp ECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECC---------------------SSCCCEEECT
T ss_pred ECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCC---------------------CcccceeECC
Confidence 99999999998865 89999999875432 222222 1477899999
Q ss_pred CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc--------------------------------------------
Q psy7108 164 DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL-------------------------------------------- 199 (703)
Q Consensus 164 dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~-------------------------------------------- 199 (703)
||+ +++++ +.|.+||+.+++.+..+........
T Consensus 158 dg~-l~~~~--~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 234 (349)
T 1jmx_B 158 DGS-LYVAG--PDIYKMDVKTGKYTVALPLRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYG 234 (349)
T ss_dssp TSC-EEEES--SSEEEECTTTCCEEEEECSTTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEE
T ss_pred CCc-EEEcc--CcEEEEeCCCCceeccccccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCcccccccee
Confidence 999 66654 3499999999988776653320000
Q ss_pred ----------------ccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCC
Q psy7108 200 ----------------DGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPT 262 (703)
Q Consensus 200 ----------------~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spd 262 (703)
......+..++++| +|+.++++ + ..|.+||+.+++....+.. ...+.+++|+|+
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~sp~dg~~l~~~--~------~~v~~~d~~~~~~~~~~~~-~~~~~~~~~s~d 305 (349)
T 1jmx_B 235 YLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGV--L------NRLAKYDLKQRKLIKAANL-DHTYYCVAFDKK 305 (349)
T ss_dssp EEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEE--E------SEEEEEETTTTEEEEEEEC-SSCCCEEEECSS
T ss_pred EEEEeccCCcEEecccccCCCcceeeEecCCCCCEEEEE--c------CeEEEEECccCeEEEEEcC-CCCccceEECCC
Confidence 00011345677889 99988887 2 3799999999887666553 335779999999
Q ss_pred CCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108 263 GQAWVAATTEG-VHIYSLDSGYVFDPF 288 (703)
Q Consensus 263 g~~l~s~s~Dg-v~iwd~~~~~~~~~~ 288 (703)
|++|++++.++ |.+||..+++....+
T Consensus 306 g~~l~~~~~~~~v~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 306 GDKLYLGGTFNDLAVFNPDTLEKVKNI 332 (349)
T ss_dssp SSCEEEESBSSEEEEEETTTTEEEEEE
T ss_pred CCEEEEecCCCeEEEEeccccceeeee
Confidence 99998888888 999999988766544
No 157
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.68 E-value=6.5e-16 Score=175.42 Aligned_cols=228 Identities=12% Similarity=0.051 Sum_probs=164.2
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEEC---CCeEEEEEcC
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATL---DGQLIMFDVE 121 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~---dg~I~vwd~~ 121 (703)
..+|++++|+| ||+.||+++. ||+++||++.++ ....+..+. ..+.+++|+|| +.+++++. +....+|.++
T Consensus 21 ~~~~~~~~~~~--DG~~la~~s~~~g~~~lw~~~~g-~~~~lt~~~~~~~~~~~~spd-~~l~~~~~~~g~~~~~l~~~~ 96 (582)
T 3o4h_A 21 AVEKYSLQGVV--DGDKLLVVGFSEGSVNAYLYDGG-ETVKLNREPINSVLDPHYGVG-RVILVRDVSKGAEQHALFKVN 96 (582)
T ss_dssp HSCEEEEEEEE--TTTEEEEEEEETTEEEEEEEETT-EEEECCSSCCSEECEECTTCS-EEEEEEECSTTSCCEEEEEEE
T ss_pred ccchheeecCC--CCCeEEEEEccCCceeEEEEcCC-CcEeeecccccccccccCCCC-eEEEEeccCCCCcceEEEEEe
Confidence 56899999999 9999999887 999999998555 556666666 58999999999 77777765 4545565443
Q ss_pred C---CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE-EEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108 122 S---AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC-ILAAGQSKYICIYSSREGILLKKFTITQNK 197 (703)
Q Consensus 122 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~-l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~ 197 (703)
. +... .+.... .+...+|+|||+. +++.+.++.+.+||+.+++.......+
T Consensus 97 ~~~~g~~~-~l~~~~---------------------~~~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~~~~--- 151 (582)
T 3o4h_A 97 TSRPGEEQ-RLEAVK---------------------PMRILSGVDTGEAVVFTGATEDRVALYALDGGGLRELARLP--- 151 (582)
T ss_dssp TTSTTCCE-ECTTSC---------------------SBEEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEEEES---
T ss_pred ccCCCccc-cccCCC---------------------CceeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEeecCC---
Confidence 2 2222 222211 2345688888864 333444455669999988765543311
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC---E
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG---V 274 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg---v 274 (703)
..+++|||||+.+++++.++ ++...|++||+.+++.. .+..|...+.+++|||||+.|+++..++ |
T Consensus 152 --------~~~~~~spDG~~la~~~~~~--~~~~~i~~~d~~~g~~~-~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i 220 (582)
T 3o4h_A 152 --------GFGFVSDIRGDLIAGLGFFG--GGRVSLFTSNLSSGGLR-VFDSGEGSFSSASISPGMKVTAGLETAREARL 220 (582)
T ss_dssp --------SCEEEEEEETTEEEEEEEEE--TTEEEEEEEETTTCCCE-EECCSSCEEEEEEECTTSCEEEEEECSSCEEE
T ss_pred --------CceEEECCCCCEEEEEEEcC--CCCeEEEEEcCCCCCce-EeecCCCccccceECCCCCEEEEccCCCeeEE
Confidence 16789999999999777552 22257999999888754 5677888899999999999999887777 8
Q ss_pred EEEEcCCCceeccee------eeEE--------EccchhhhHhhcCCcceEEEEEEec
Q psy7108 275 HIYSLDSGYVFDPFL------LDIS--------ITPQSVKEALADKDYAKALMMSLKL 318 (703)
Q Consensus 275 ~iwd~~~~~~~~~~~------~~~~--------~spd~~~~~l~sg~~~~~l~la~~l 318 (703)
++||+++++.. ... ..+. |+||+ .++++++.++.+.+ |.+
T Consensus 221 ~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg--~~~~~~~~~g~~~l-~~~ 274 (582)
T 3o4h_A 221 VTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG--RLAVVARREGRSAV-FID 274 (582)
T ss_dssp EEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS--CEEEEEEETTEEEE-EET
T ss_pred EEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC--cEEEEEEcCCcEEE-EEE
Confidence 89999888765 221 2355 99999 67777777777777 665
No 158
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.66 E-value=2e-16 Score=184.36 Aligned_cols=223 Identities=11% Similarity=0.069 Sum_probs=154.3
Q ss_pred EEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEEEEC---------CCeEEEEE
Q psy7108 52 CIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVVATL---------DGQLIMFD 119 (703)
Q Consensus 52 ~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las~s~---------dg~I~vwd 119 (703)
+++|+| ++.+++ .+.|++|++||+.+++....+..+.. .+.+++|||||++|++++. ++.|++||
T Consensus 20 ~~~~s~--dg~~~~-~~~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWIS--GQEYLH-QSADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESS--SSEEEE-ECTTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECC--CCeEEE-EcCCCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 789999 996555 45699999999988865433333322 3899999999999999876 68999999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEE-eccCCc
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFT-ITQNKS 198 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~-~~~~~~ 198 (703)
+.+++.+....- ...+..++|||||+.|+++. ++.|++||+.+++...... ++....
T Consensus 97 ~~~g~~~~~~~l---------------------~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v 154 (719)
T 1z68_A 97 LSNGEFVRGNEL---------------------PRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKI 154 (719)
T ss_dssp TTTTEECCSSCC---------------------CSSBCCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTE
T ss_pred CCCCccccceec---------------------CcccccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCe
Confidence 998875210000 01477899999999999885 7899999999887654221 111111
Q ss_pred ccccccc---------ceeeeeccCCCEEEEEcccCCC----------------------------CCeeEEECCCCCCC
Q psy7108 199 LDGINDF---------INRRKMTEFGNVSLIETRETHE----------------------------GGNVVLKLPGVKKG 241 (703)
Q Consensus 199 ~~~~~~~---------v~~~~~spdg~~l~~~~~~~~~----------------------------~~~~~i~iwd~~~~ 241 (703)
..++... ..+++|||||+.+++++.++.. .....+++||+.++
T Consensus 155 ~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~ 234 (719)
T 1z68_A 155 FNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYP 234 (719)
T ss_dssp EESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCH
T ss_pred EcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCC
Confidence 1222222 2589999999999987754211 12347899999888
Q ss_pred ccc--------eeecCCccceEEEEEcCCCCEEEEEeC--CC---EEEEE----cCCCceecce----------ee----
Q psy7108 242 DMA--------ARVLKPEVRVFCVKFSPTGQAWVAATT--EG---VHIYS----LDSGYVFDPF----------LL---- 290 (703)
Q Consensus 242 ~~~--------~~~~~h~~~V~~l~~spdg~~l~s~s~--Dg---v~iwd----~~~~~~~~~~----------~~---- 290 (703)
+.. ..+.+|...+.+++||||++.+++... ++ |.+|| ..+++..... ..
T Consensus 235 ~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 314 (719)
T 1z68_A 235 AYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCLQWLKRVQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFV 314 (719)
T ss_dssp HHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEEEEEESSTTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSC
T ss_pred CccceeEccCCccCCCCcceEEEeEEeCCCeEEEEEeccccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccC
Confidence 653 123457888999999999877766432 22 77889 7776654332 12
Q ss_pred -eEEEccchh
Q psy7108 291 -DISITPQSV 299 (703)
Q Consensus 291 -~~~~spd~~ 299 (703)
...|+||+.
T Consensus 315 ~~~~~spdg~ 324 (719)
T 1z68_A 315 STPVFSYDAI 324 (719)
T ss_dssp CCCEECTTSS
T ss_pred CccEECCCCC
Confidence 578999983
No 159
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.66 E-value=5e-15 Score=158.48 Aligned_cols=232 Identities=8% Similarity=-0.009 Sum_probs=162.1
Q ss_pred cCCCccccccccCCCcCeEE-----EEEcCCCCCCEEEEEeC-CCc--EEEEEcCCCceeEEEec-CCCcEEEEEEecCC
Q psy7108 33 MAARVLKPEVLSGHEGPVSC-----IEFSPVLSSTGMVSASW-DKT--VKLWNAVETDTQHETIQ-LLSDALCVAYKPDG 103 (703)
Q Consensus 33 ~tg~~~~~~~l~gH~~~V~~-----l~~sp~~dg~~L~sgs~-Dg~--V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg 103 (703)
.+|..+ ..++.|...... .+|+| ||+.|++++. ++. |.+||+.+++. ..+.. +...+.+++|+|||
T Consensus 18 ~~g~~~--~~lt~~~~~~~~~~~~~~~~Sp--Dg~~l~~~~~~~g~~~l~~~d~~~g~~-~~lt~~~~~~~~~~~~spdg 92 (388)
T 3pe7_A 18 STGAQV--TRLTPPDVTCHRNYFYQKCFTR--DGSKLLFGGAFDGPWNYYLLDLNTQVA-TQLTEGRGDNTFGGFLSPDD 92 (388)
T ss_dssp TTCCEE--EECSCTTSCEECCCTTSCCBCT--TSCEEEEEECTTSSCEEEEEETTTCEE-EECCCSSCBCSSSCEECTTS
T ss_pred CCCcce--EEecCCcccccchhhcCccCCC--CCCEEEEEEcCCCCceEEEEeCCCCce-EEeeeCCCCCccceEEcCCC
Confidence 567777 888888877766 89999 9999999887 674 77788877743 33333 44444567899999
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE--EEcCCCCEEEEE----------
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV--CYSADGSCILAA---------- 171 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i--~~spdg~~l~s~---------- 171 (703)
+.|++++.++.|++||+.+++.......+.. .+... .++|+++.++..
T Consensus 93 ~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~--------------------~~~~~~~~~~~dg~~l~~~~~~~~~~~~~ 152 (388)
T 3pe7_A 93 DALFYVKDGRNLMRVDLATLEENVVYQVPAE--------------------WVGYGTWVANSDCTKLVGIEIRREDWVPL 152 (388)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTT--------------------EEEEEEEEECTTSSEEEEEEEEGGGCCCC
T ss_pred CEEEEEeCCCeEEEEECCCCcceeeeechhh--------------------cccccceeECCCCCeeccccccCcccccc
Confidence 9999999999999999999987766654432 33333 348999988743
Q ss_pred ------------ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCC
Q psy7108 172 ------------GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGV 238 (703)
Q Consensus 172 ------------s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~ 238 (703)
..+..|.+||+.+++...... +. ..+..++|+| ||+.+++....+.+.....|.++|.
T Consensus 153 ~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~-~~--------~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~ 223 (388)
T 3pe7_A 153 TDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQ-EN--------QWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINE 223 (388)
T ss_dssp CSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEE-ES--------SCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEET
T ss_pred cccchhhhhhccCCcceEEEEECCCCceEEeec-CC--------ccccccEECCCCCCEEEEEEecCCCCCcceEEEEeC
Confidence 234679999999987554432 22 2578899999 9998887765432222346778887
Q ss_pred CCCccceeecCCc--cceEEEEEcCCCCEEEEEeCC-----C-EEEEEcCCCceecc--ee---------eeEEEccchh
Q psy7108 239 KKGDMAARVLKPE--VRVFCVKFSPTGQAWVAATTE-----G-VHIYSLDSGYVFDP--FL---------LDISITPQSV 299 (703)
Q Consensus 239 ~~~~~~~~~~~h~--~~V~~l~~spdg~~l~s~s~D-----g-v~iwd~~~~~~~~~--~~---------~~~~~spd~~ 299 (703)
..++.. .+..+. ..+..++|||||+.|+..+.+ . |.+||+.+++.... +. ....|+||+.
T Consensus 224 ~~~~~~-~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~ 302 (388)
T 3pe7_A 224 DGTNMR-KVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLENRQLTSMPACSHLMSNYDGSLMVGDGS 302 (388)
T ss_dssp TSCCCE-ESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCCEEEEEEECCEEEEEECTTSSEEEEEEC
T ss_pred CCCceE-EeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCceEEEEcCCCceeeeecCCCCeEccCCC
Confidence 665443 333333 357889999999988654432 2 88999998874221 11 1236899983
No 160
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.65 E-value=6.8e-15 Score=178.63 Aligned_cols=225 Identities=8% Similarity=-0.103 Sum_probs=165.5
Q ss_pred eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE
Q psy7108 30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA 109 (703)
Q Consensus 30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~ 109 (703)
+|+..+... ..+.+|...+.+++|+| ||++|++++.++.|++||+.+++.......|...+.+++|+|||++|+++
T Consensus 363 ~~d~~~~~~--~~l~~~~~~~~~~~~Sp--DG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~ 438 (1045)
T 1k32_A 363 IYDYRTGKA--EKFEENLGNVFAMGVDR--NGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYG 438 (1045)
T ss_dssp EEETTTCCE--EECCCCCCSEEEEEECT--TSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEE
T ss_pred EEECCCCCc--eEecCCccceeeeEECC--CCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEE
Confidence 335444444 45568889999999999 99999999999999999998886555554788889999999999999988
Q ss_pred ECCC----------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEE
Q psy7108 110 TLDG----------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICI 179 (703)
Q Consensus 110 s~dg----------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~l 179 (703)
+.++ .|++||+.+++ ...+..+.. .+..++|+|||+.|++++.++...+
T Consensus 439 ~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~--------------------~~~~~~~spdG~~l~~~s~~~~~~~ 497 (1045)
T 1k32_A 439 FPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENS--------------------HDYAPAFDADSKNLYYLSYRSLDPS 497 (1045)
T ss_dssp EEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSS--------------------BEEEEEECTTSCEEEEEESCCCCCE
T ss_pred ecCccccccCCCCCeEEEEECCCCc-EEEeeCCCc--------------------ccCCceEcCCCCEEEEEecccCCcC
Confidence 7654 89999999887 445544433 6788999999999999998888888
Q ss_pred EECCCCce-------EEEEEecc----------------------------CCccccccccceeeeeccCCCEEEEEccc
Q psy7108 180 YSSREGIL-------LKKFTITQ----------------------------NKSLDGINDFINRRKMTEFGNVSLIETRE 224 (703)
Q Consensus 180 wD~~~~~~-------~~~~~~~~----------------------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~ 224 (703)
|+...... ...+.... ...+..+...+..++++|||+.+++....
T Consensus 498 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~~~~~~~l~~~~~~~~~~~~s~dg~~~~~~~~~ 577 (1045)
T 1k32_A 498 PDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDLNDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVH 577 (1045)
T ss_dssp ECSSSSCEECCSCBEEEEEESSTTCCCGGGCCCGGGSCCCCCCCCTTGGGGCEECSCCCBCEEEEEECSSEEEEEECCCC
T ss_pred cchhccccccccCceeEEEEeCCCCCCccccCcCccccccccccccCHhHceEEcCCCCCChhheEEcCCCeEEEEeccc
Confidence 87654322 11111000 00111233467789999999877752110
Q ss_pred C-------CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCc
Q psy7108 225 T-------HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGY 283 (703)
Q Consensus 225 ~-------~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~ 283 (703)
+ .......+.+||+.+++..... ..+.+++|||||+.|++++.+++++|++.+++
T Consensus 578 g~~~~~~~~~~~~~~l~~~d~~~~~~~~l~----~~v~~~~~S~DG~~l~~~~~~~i~~~d~~~~~ 639 (1045)
T 1k32_A 578 GEFAAYYQGAPEKGVLLKYDVKTRKVTEVK----NNLTDLRLSADRKTVMVRKDDGKIYTFPLEKP 639 (1045)
T ss_dssp CSHHHHHHCCCCCEEEEEEETTTCCEEEEE----EEEEEEEECTTSCEEEEEETTSCEEEEESSCT
T ss_pred CcccccccccCCCceEEEEECCCCcEEEee----cCcceEEECCCCCEEEEEcCCcEEEEeCccCc
Confidence 0 0122357899999888753322 56889999999999999988889999998876
No 161
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.65 E-value=5.3e-15 Score=179.59 Aligned_cols=200 Identities=8% Similarity=-0.022 Sum_probs=161.0
Q ss_pred CCcCeEEEEEc-CCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC-cEEEEEEecCCCEEEEEECCCeEE-EEEcCC
Q psy7108 46 HEGPVSCIEFS-PVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS-DALCVAYKPDGTEIVVATLDGQLI-MFDVES 122 (703)
Q Consensus 46 H~~~V~~l~~s-p~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-~V~~v~~spdg~~las~s~dg~I~-vwd~~~ 122 (703)
|...+.+++|+ | ||+.|++++ ++.+.+|++.++. ...+..+.. .+.+++|+ ||+.|++++.++.+. +||+.+
T Consensus 294 ~~~~v~~~~~S~p--dG~~la~~~-~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~~d~~~ 368 (1045)
T 1k32_A 294 SIPSKFAEDFSPL--DGDLIAFVS-RGQAFIQDVSGTY-VLKVPEPLRIRYVRRGGD-TKVAFIHGTREGDFLGIYDYRT 368 (1045)
T ss_dssp ECGGGGEEEEEEC--GGGCEEEEE-TTEEEEECTTSSB-EEECSCCSCEEEEEECSS-SEEEEEEEETTEEEEEEEETTT
T ss_pred cccccceeeecCC--CCCEEEEEE-cCEEEEEcCCCCc-eEEccCCCcceEEeeeEc-CCCeEEEEECCCceEEEEECCC
Confidence 44579999999 9 999999988 7899999987764 444556777 89999999 999999999888899 999987
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
++... +..+. ..+..++|+|||+.|++++.++.|++||+.+++.......+.
T Consensus 369 ~~~~~-l~~~~--------------------~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~------- 420 (1045)
T 1k32_A 369 GKAEK-FEENL--------------------GNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSRE------- 420 (1045)
T ss_dssp CCEEE-CCCCC--------------------CSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSS-------
T ss_pred CCceE-ecCCc--------------------cceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCC-------
Confidence 76543 22332 378999999999999999999999999999998776654433
Q ss_pred cccceeeeeccCCCEEEEEcccC----CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108 203 NDFINRRKMTEFGNVSLIETRET----HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY 277 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~----~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw 277 (703)
..+.+++|||||+++++++.++ .......|++||+.+++ ...+..|...+.+++|+|||++|++++.++ ..+|
T Consensus 421 -~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s~~~~~~~~ 498 (1045)
T 1k32_A 421 -AMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLSYRSLDPSP 498 (1045)
T ss_dssp -SCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEESCCCCCEE
T ss_pred -CCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEecccCCcCc
Confidence 3778899999999998876532 01234689999999887 566777888899999999999999988876 6677
Q ss_pred EcC
Q psy7108 278 SLD 280 (703)
Q Consensus 278 d~~ 280 (703)
+..
T Consensus 499 ~~~ 501 (1045)
T 1k32_A 499 DRV 501 (1045)
T ss_dssp CSS
T ss_pred chh
Confidence 643
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.64 E-value=3.1e-16 Score=182.65 Aligned_cols=245 Identities=11% Similarity=0.047 Sum_probs=157.6
Q ss_pred ceeecc-CCCccccccccCCCc---CeEEEEEcCCCCCCEEEEEeC---------CCcEEEEEcCCCceeEEEecCCCcE
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEG---PVSCIEFSPVLSSTGMVSASW---------DKTVKLWNAVETDTQHETIQLLSDA 94 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~---~V~~l~~sp~~dg~~L~sgs~---------Dg~V~iWd~~~~~~~~~~~~~~~~V 94 (703)
+.+||. +|++. ..+.+|.. .+.+++||| ||++|++++. |++|++||+.+++... .......+
T Consensus 38 i~~~~~~~g~~~--~~~~~~~~~~~~~~~~~~Sp--Dg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~-~~~l~~~~ 112 (719)
T 1z68_A 38 IVLYNIETGQSY--TILSNRTMKSVNASNYGLSP--DRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVR-GNELPRPI 112 (719)
T ss_dssp EEEEESSSCCEE--EEECHHHHHTTTCSEEEECT--TSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-SSCCCSSB
T ss_pred EEEEEcCCCcEE--EEEccccccccceeeEEECC--CCCeEEEEecCceeEEeecceEEEEEECCCCcccc-ceecCccc
Confidence 455663 55655 55555544 489999999 9999999876 7899999998874310 01223568
Q ss_pred EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe-ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108 95 LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE-ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ 173 (703)
Q Consensus 95 ~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~ 173 (703)
.+++|||||+.||++. ++.|++||+.+++...... ++...... ...+..... .-.....+++|||||+.|++++.
T Consensus 113 ~~~~~SPDG~~la~~~-~~~i~~~~~~~g~~~~l~~~~~~~~v~~-g~~~~v~~e--e~~~~~~~~~wSPDG~~la~~~~ 188 (719)
T 1z68_A 113 QYLCWSPVGSKLAYVY-QNNIYLKQRPGDPPFQITFNGRENKIFN-GIPDWVYEE--EMLATKYALWWSPNGKFLAYAEF 188 (719)
T ss_dssp CCEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCCCCBTTTEEE-SSCCHHHHH--HTTCSSCCEEECTTSSEEEEEEE
T ss_pred ccceECCCCCEEEEEE-CCeEEEEeCCCCCcEEEecCCCcCCeEc-ccccceeee--ecccCcccEEECCCCCEEEEEEE
Confidence 8999999999999985 7899999999887654321 11100000 000000000 00012247999999999999875
Q ss_pred CC----------------------------------cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEE
Q psy7108 174 SK----------------------------------YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219 (703)
Q Consensus 174 dg----------------------------------~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 219 (703)
|. .|++||+.+++....+.......+.++...+.+++||||++.++
T Consensus 189 d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~~ 268 (719)
T 1z68_A 189 NDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVCL 268 (719)
T ss_dssp ECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEEE
T ss_pred CCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEEE
Confidence 52 78899998876421111111111234556789999999987655
Q ss_pred EEcccCCCCCeeEEECCC----CCCCccceee----cCCccceE-----EEEEcCCCCEEEE--EeCCC---EEEEEcCC
Q psy7108 220 IETRETHEGGNVVLKLPG----VKKGDMAARV----LKPEVRVF-----CVKFSPTGQAWVA--ATTEG---VHIYSLDS 281 (703)
Q Consensus 220 ~~~~~~~~~~~~~i~iwd----~~~~~~~~~~----~~h~~~V~-----~l~~spdg~~l~s--~s~Dg---v~iwd~~~ 281 (703)
+.... ......|.+|| ..+++..... ..|...+. .+.|+|||+.++. +..+| |.+|++.+
T Consensus 269 ~~~~~--~~~~~~l~~~d~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~g~~~l~~~~~~~ 346 (719)
T 1z68_A 269 QWLKR--VQNVSVLSICDFREDWQTWDCPKTQEHIEESRTGWAGGFFVSTPVFSYDAISYYKIFSDKDGYKHIHYIKDTV 346 (719)
T ss_dssp EEEES--STTEEEEEEEEECSSSSSEECCGGGEEEEECSSSCSSSSSCCCCEECTTSSCEEEEEECTTSCEEEEEESSCS
T ss_pred EEecc--ccCeEEEEEEcccCCCCCCceEEEEecccccCCceEccccCCccEECCCCCeEEEEEEccCCceEEEEEECCC
Confidence 53322 22335788999 8888766655 46776676 8899999997644 44555 66777766
Q ss_pred Cc
Q psy7108 282 GY 283 (703)
Q Consensus 282 ~~ 283 (703)
++
T Consensus 347 ~~ 348 (719)
T 1z68_A 347 EN 348 (719)
T ss_dssp TT
T ss_pred Cc
Confidence 54
No 163
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.64 E-value=2.4e-14 Score=151.83 Aligned_cols=249 Identities=14% Similarity=0.134 Sum_probs=159.5
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEeCC----CcEEEEEcCCC-ceeEE---EecCCCcEEEEEEecCCCEEEEEE-CCCeEE
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSASWD----KTVKLWNAVET-DTQHE---TIQLLSDALCVAYKPDGTEIVVAT-LDGQLI 116 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs~D----g~V~iWd~~~~-~~~~~---~~~~~~~V~~v~~spdg~~las~s-~dg~I~ 116 (703)
|......++|+| ++++|++++.+ +.|.+|++... ..... ...+......+++ +++.|++++ .++.|.
T Consensus 48 ~~~~p~~l~~sp--dg~~l~~~~~~~~~~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--dg~~l~~~~~~~~~v~ 123 (361)
T 3scy_A 48 EVANPSYLIPSA--DGKFVYSVNEFSKDQAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--NGKNIVTANYSGGSIT 123 (361)
T ss_dssp ECSCCCSEEECT--TSSEEEEEECCSSTTCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--CSSEEEEEETTTTEEE
T ss_pred cCCCCceEEECC--CCCEEEEEEccCCCCCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--CCCEEEEEECCCCEEE
Confidence 777888999999 99999999876 79999998753 23222 2224556777887 888887776 578999
Q ss_pred EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCce------E-
Q psy7108 117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGIL------L- 188 (703)
Q Consensus 117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~------~- 188 (703)
+|++.....+..+.......... ......+...+.+++|+|||+++++++ .++.|.+|++..... +
T Consensus 124 ~~~~~~~g~~~~~~~~~~~~g~~------~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~ 197 (361)
T 3scy_A 124 VFPIGQDGALLPASDVIEFKGSG------PDKERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFL 197 (361)
T ss_dssp EEEBCTTSCBCSCSEEEECCCCC------SCTTTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCE
T ss_pred EEEeCCCCcCcccceeEEccCCC------CCccccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCccccccee
Confidence 99997543322111000000000 000011223578899999999776655 478999999875431 1
Q ss_pred -----EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceee---cCCccceEEEE
Q psy7108 189 -----KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARV---LKPEVRVFCVK 258 (703)
Q Consensus 189 -----~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~---~~h~~~V~~l~ 258 (703)
....... ......++|+|||++++++...+ ..|.+||+.+++. .... ..+...+.+++
T Consensus 198 ~~~~~~~~~~~~-------~~~~~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~ 265 (361)
T 3scy_A 198 TKGTPEAFKVAP-------GSGPRHLIFNSDGKFAYLINEIG-----GTVIAFRYADGMLDEIQTVAADTVNAQGSGDIH 265 (361)
T ss_dssp EEEEEEEEECCT-------TCCEEEEEECTTSSEEEEEETTT-----CEEEEEEEETTEEEEEEEEESCSSCCCCEEEEE
T ss_pred ecccccceecCC-------CCCCeEEEEcCCCCEEEEEcCCC-----CeEEEEEecCCceEEeEEEecCCCCCCCcccEE
Confidence 1111111 12457899999999887776432 3799999887643 2222 22334578999
Q ss_pred EcCCCCEEEEEeCC--C-EEEEEcC--CCce--ecc-----eeeeEEEccchhhhHhhcCC-cceEEEEEEecC
Q psy7108 259 FSPTGQAWVAATTE--G-VHIYSLD--SGYV--FDP-----FLLDISITPQSVKEALADKD-YAKALMMSLKLN 319 (703)
Q Consensus 259 ~spdg~~l~s~s~D--g-v~iwd~~--~~~~--~~~-----~~~~~~~spd~~~~~l~sg~-~~~~l~la~~l~ 319 (703)
|+|||++|+++..+ + |.+|+++ +++. ... ....++|+|++ ..+..++ .++.+.+ |.++
T Consensus 266 ~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~spdg--~~l~~~~~~~~~v~v-~~~d 336 (361)
T 3scy_A 266 LSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIITPNG--KYLLVACRDTNVIQI-FERD 336 (361)
T ss_dssp ECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEECTTS--CEEEEEETTTTEEEE-EEEC
T ss_pred ECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEECCCC--CEEEEEECCCCCEEE-EEEE
Confidence 99999999776655 5 9999986 4442 221 23568999999 5444433 4566665 5554
No 164
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.63 E-value=1.9e-14 Score=167.15 Aligned_cols=206 Identities=15% Similarity=0.185 Sum_probs=147.5
Q ss_pred eEEEEEcCCCCCCEEEEEe---------------------------------CCCcEEEEEcCCCceeEEEe--cCCCcE
Q psy7108 50 VSCIEFSPVLSSTGMVSAS---------------------------------WDKTVKLWNAVETDTQHETI--QLLSDA 94 (703)
Q Consensus 50 V~~l~~sp~~dg~~L~sgs---------------------------------~Dg~V~iWd~~~~~~~~~~~--~~~~~V 94 (703)
+.+++|+| ||++|++++ .+..|++||+.+++...... .+...+
T Consensus 183 ~~~~~~Sp--Dg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~ 260 (706)
T 2z3z_A 183 EKGTFWSP--KGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPKEKFL 260 (706)
T ss_dssp CCSEEECT--TSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCTTCEE
T ss_pred CceEEECC--CCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCCceeE
Confidence 48999999 999999987 44679999998775332221 356779
Q ss_pred EEEEEecCCCEEEEEECCC-----eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC--CCCE
Q psy7108 95 LCVAYKPDGTEIVVATLDG-----QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA--DGSC 167 (703)
Q Consensus 95 ~~v~~spdg~~las~s~dg-----~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp--dg~~ 167 (703)
.+++|+|||+.|++++.++ .|++||+.+++....+...... .....+.+++|+| ||++
T Consensus 261 ~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~---------------~~~~~~~~~~~sp~~dg~~ 325 (706)
T 2z3z_A 261 TNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDK---------------HYVEPLHPLTFLPGSNNQF 325 (706)
T ss_dssp EEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECS---------------SCCCCCSCCEECTTCSSEE
T ss_pred eeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCC---------------CeECccCCceeecCCCCEE
Confidence 9999999999999988776 8999999998444333221110 0001235689999 9999
Q ss_pred EEEEecCCcEEEEECC-CCceEEEEEeccCCcccccccccee-eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce
Q psy7108 168 ILAAGQSKYICIYSSR-EGILLKKFTITQNKSLDGINDFINR-RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA 245 (703)
Q Consensus 168 l~s~s~dg~I~lwD~~-~~~~~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~ 245 (703)
+++++.|+.+++|++. ++..+..+..+ ...+.. ++|+|+|+.+++++..+ ......|..||..+++. .
T Consensus 326 l~~~~~~g~~~l~~~~~~~~~~~~l~~~--------~~~v~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~d~~~~~~-~ 395 (706)
T 2z3z_A 326 IWQSRRDGWNHLYLYDTTGRLIRQVTKG--------EWEVTNFAGFDPKGTRLYFESTEA-SPLERHFYCIDIKGGKT-K 395 (706)
T ss_dssp EEEECTTSSCEEEEEETTSCEEEECCCS--------SSCEEEEEEECTTSSEEEEEESSS-CTTCBEEEEEETTCCCC-E
T ss_pred EEEEccCCccEEEEEECCCCEEEecCCC--------CeEEEeeeEEcCCCCEEEEEecCC-CCceEEEEEEEcCCCCc-e
Confidence 9999999999999876 55555554322 224555 79999999888777553 11124778888877653 2
Q ss_pred eecCCccceEEEEEcCCCCEEEEEeC-C---C-EEEEEcCCCc
Q psy7108 246 RVLKPEVRVFCVKFSPTGQAWVAATT-E---G-VHIYSLDSGY 283 (703)
Q Consensus 246 ~~~~h~~~V~~l~~spdg~~l~s~s~-D---g-v~iwd~~~~~ 283 (703)
.+ .+...+.+++|||||++++.++. + + +.+|++.+++
T Consensus 396 ~l-~~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 396 DL-TPESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp ES-CCSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred ec-cCCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 23 36667999999999999876543 3 4 8999998876
No 165
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.62 E-value=5.1e-15 Score=173.02 Aligned_cols=210 Identities=10% Similarity=0.043 Sum_probs=147.2
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCc-----EEEEEEecCCCEEEEEECC---------C
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSD-----ALCVAYKPDGTEIVVATLD---------G 113 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~-----V~~v~~spdg~~las~s~d---------g 113 (703)
....+++|+| |+.+++++ |++|++||+.++++...+..|... ..+++|||||++|++++.+ +
T Consensus 17 ~~~~~~~w~~--dg~~~~~~--~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~ 92 (740)
T 4a5s_A 17 LKLYSLRWIS--DHEYLYKQ--ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTA 92 (740)
T ss_dssp CCCCCEEECS--SSEEEEEE--TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEE
T ss_pred ccccccEECC--CCcEEEEc--CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccce
Confidence 3466899999 99988886 899999999988765444444422 2448899999999998876 5
Q ss_pred eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEE-E
Q psy7108 114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKF-T 192 (703)
Q Consensus 114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~-~ 192 (703)
.+.+||+.+++... +..+ .+.+...+|||||+.|+.+. ++.|++||+.+++..+.. .
T Consensus 93 ~~~~~d~~~~~~~~-l~~~--------------------~~~~~~~~~SPdG~~la~~~-~~~i~~~~~~~~~~~~lt~~ 150 (740)
T 4a5s_A 93 SYDIYDLNKRQLIT-EERI--------------------PNNTQWVTWSPVGHKLAYVW-NNDIYVKIEPNLPSYRITWT 150 (740)
T ss_dssp EEEEEETTTTEECC-SSCC--------------------CTTEEEEEECSSTTCEEEEE-TTEEEEESSTTSCCEECCSC
T ss_pred EEEEEECCCCcEEE-cccC--------------------CCcceeeEECCCCCEEEEEE-CCeEEEEECCCCceEEEcCC
Confidence 67799999987542 3222 23689999999999999874 689999999988754321 1
Q ss_pred eccCCcccccccc---------ceeeeeccCCCEEEEEcccCC------------------------------CCCeeEE
Q psy7108 193 ITQNKSLDGINDF---------INRRKMTEFGNVSLIETRETH------------------------------EGGNVVL 233 (703)
Q Consensus 193 ~~~~~~~~~~~~~---------v~~~~~spdg~~l~~~~~~~~------------------------------~~~~~~i 233 (703)
+.......++.++ ...+.|||||+.+++...++. ......+
T Consensus 151 g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l 230 (740)
T 4a5s_A 151 GKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKF 230 (740)
T ss_dssp CBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEE
T ss_pred CCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEE
Confidence 1212122232222 245899999999888753321 1223478
Q ss_pred ECCCCCC---Cc--cceeec------CCccceEEEEEcCCCCEEEEEeC----CC-EEEEEcCCCc
Q psy7108 234 KLPGVKK---GD--MAARVL------KPEVRVFCVKFSPTGQAWVAATT----EG-VHIYSLDSGY 283 (703)
Q Consensus 234 ~iwd~~~---~~--~~~~~~------~h~~~V~~l~~spdg~~l~s~s~----Dg-v~iwd~~~~~ 283 (703)
++||+.+ ++ ....+. ++...+..++|||||+.++.... +. |.+||+.+++
T Consensus 231 ~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 231 FVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 8999988 73 222333 37778999999999997655432 22 8899998887
No 166
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.62 E-value=2.6e-16 Score=184.00 Aligned_cols=241 Identities=8% Similarity=0.064 Sum_probs=149.2
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCC-----CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCe-----
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWD-----KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQ----- 114 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~D-----g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~----- 114 (703)
+|...+.+++||| ||++|+.++.+ .+|++||+.+++...... +...+..++|+|| +.|+.++.++.
T Consensus 160 ~~~~~~~~~~~SP--DG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~-~~~~~~~~~wspD-~~l~~~~~~~~~~~~~ 235 (741)
T 1yr2_A 160 DGATALDAWAASD--DGRLLAYSVQDGGSDWRTVKFVGVADGKPLADEL-KWVKFSGLAWLGN-DALLYSRFAEPKEGQA 235 (741)
T ss_dssp ---EEEEEEEECT--TSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEE-EEEESCCCEESTT-SEEEEEECCCC-----
T ss_pred CCCEEEEeEEECC--CCCEEEEEEcCCCCceEEEEEEECCCCCCCCccC-CCceeccEEEECC-CEEEEEEecCcccccc
Confidence 4545789999999 99999987654 369999999886543322 1112357899999 99998887654
Q ss_pred ---------EEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEE
Q psy7108 115 ---------LIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YIC 178 (703)
Q Consensus 115 ---------I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~ 178 (703)
|++|++.+++. ...+.... +...+..+.|+|||++|+..+.++ .|+
T Consensus 236 ~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~------------------~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~ 297 (741)
T 1yr2_A 236 FQALNYNQTVWLHRLGTPQSADQPVFATPE------------------LPKRGHGASVSSDGRWVVITSSEGTDPVNTVH 297 (741)
T ss_dssp ---CCCCCEEEEEETTSCGGGCEEEECCTT------------------CTTCEEEEEECTTSCEEEEEEECTTCSCCEEE
T ss_pred cccCCCCCEEEEEECCCCchhCEEEeccCC------------------CCeEEEEEEECCCCCEEEEEEEccCCCcceEE
Confidence 88999877652 22222211 112478899999999998876543 799
Q ss_pred EEECCCC--ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccce
Q psy7108 179 IYSSREG--ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRV 254 (703)
Q Consensus 179 lwD~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V 254 (703)
+||+.++ ++...+..+.. ..... ++|+|+.+++.+..+ .....|.+||+.++ +....+..+...+
T Consensus 298 ~~d~~~~~~~~~~~l~~~~~--------~~~~~-~~~dg~~l~~~s~~~--~~~~~l~~~d~~~~~~~~~~l~~~~~~~l 366 (741)
T 1yr2_A 298 VARVTNGKIGPVTALIPDLK--------AQWDF-VDGVGDQLWFVSGDG--APLKKIVRVDLSGSTPRFDTVVPESKDNL 366 (741)
T ss_dssp EEEEETTEECCCEEEECSSS--------SCEEE-EEEETTEEEEEECTT--CTTCEEEEEECSSSSCEEEEEECCCSSEE
T ss_pred EEECCCCCCcccEEecCCCC--------ceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCCccccEEEecCCCCeE
Confidence 9999876 31344433221 22233 358999888876543 22357899998874 2333344455567
Q ss_pred EEEEEcCCCCEEEEEeCCC-EEEEEcC-CCceecce-------eeeEEEccchhhhHhh--cCCcceEEEEEEecCc
Q psy7108 255 FCVKFSPTGQAWVAATTEG-VHIYSLD-SGYVFDPF-------LLDISITPQSVKEALA--DKDYAKALMMSLKLNE 320 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~-~~~~~~~~-------~~~~~~spd~~~~~l~--sg~~~~~l~la~~l~~ 320 (703)
.+++|+ ++..+++...|+ .+||.++ ++.....+ ...++++|++....+. +......+.. +++..
T Consensus 367 ~~~~~~-~~~lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~-~d~~t 441 (741)
T 1yr2_A 367 ESVGIA-GNRLFASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLA-LDPAT 441 (741)
T ss_dssp EEEEEE-BTEEEEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEE-EETTT
T ss_pred EEEEEE-CCEEEEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEE-EECCC
Confidence 778887 556678888888 5555443 23322211 2446777876221111 2333444544 66544
No 167
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.59 E-value=5e-14 Score=150.69 Aligned_cols=239 Identities=8% Similarity=-0.017 Sum_probs=156.0
Q ss_pred ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEE--EecCCC
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVA--YKPDGT 104 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~--~spdg~ 104 (703)
+..+|. +|+.. ....+|...+.+++|+| ||+.|++++.++.+++||+.+++.......+...+.... ++|+++
T Consensus 62 l~~~d~~~g~~~--~lt~~~~~~~~~~~~sp--dg~~l~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~ 137 (388)
T 3pe7_A 62 YYLLDLNTQVAT--QLTEGRGDNTFGGFLSP--DDDALFYVKDGRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCT 137 (388)
T ss_dssp EEEEETTTCEEE--ECCCSSCBCSSSCEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSS
T ss_pred EEEEeCCCCceE--EeeeCCCCCccceEEcC--CCCEEEEEeCCCeEEEEECCCCcceeeeechhhcccccceeECCCCC
Confidence 344563 45554 55566666666789999 999999999999999999998865444444444454444 489999
Q ss_pred EEEEEE----------------------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc
Q psy7108 105 EIVVAT----------------------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS 162 (703)
Q Consensus 105 ~las~s----------------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s 162 (703)
.++... .+..|++||+.+++....... .. .+..++|+
T Consensus 138 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~-~~--------------------~~~~~~~s 196 (388)
T 3pe7_A 138 KLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQE-NQ--------------------WLGHPIYR 196 (388)
T ss_dssp EEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEE-SS--------------------CEEEEEEE
T ss_pred eeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecC-Cc--------------------cccccEEC
Confidence 887532 346799999999876554433 22 58899999
Q ss_pred C-CCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEEC
Q psy7108 163 A-DGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKL 235 (703)
Q Consensus 163 p-dg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~i 235 (703)
| ||+.|+.++.+ ..|.++|...+.... +.... ....+..++|+|||+.+++.+... ......|.+
T Consensus 197 p~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~-l~~~~------~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~ 268 (388)
T 3pe7_A 197 PYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRK-VKTHA------EGESCTHEFWVPDGSALVYVSYLK-GSPDRFIYS 268 (388)
T ss_dssp TTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEE-SCCCC------TTEEEEEEEECTTSSCEEEEEEET-TCCCEEEEE
T ss_pred CCCCCEEEEEEecCCCCCcceEEEEeCCCCceEE-eeeCC------CCcccccceECCCCCEEEEEecCC-CCCcceEEE
Confidence 9 99999877653 378888887654322 21111 012466789999999886655432 111235999
Q ss_pred CCCCCCcccee--ecCCcc---ceEEEEEcCCCCEEEEE---------eCCC-EEEEEcCCCceecc-------------
Q psy7108 236 PGVKKGDMAAR--VLKPEV---RVFCVKFSPTGQAWVAA---------TTEG-VHIYSLDSGYVFDP------------- 287 (703)
Q Consensus 236 wd~~~~~~~~~--~~~h~~---~V~~l~~spdg~~l~s~---------s~Dg-v~iwd~~~~~~~~~------------- 287 (703)
||+.+++.... ..++.. ....++|+|||+.|+.. ..+. |.+|++.+++....
T Consensus 269 ~d~~~g~~~~l~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~ 348 (388)
T 3pe7_A 269 ADPETLENRQLTSMPACSHLMSNYDGSLMVGDGSDAPVDVQDDSGYKIENDPFLYVFNMKNGTQHRVARHDTSWKVFEGD 348 (388)
T ss_dssp ECTTTCCEEEEEEECCEEEEEECTTSSEEEEEECCC------------CCCCEEEEEETTTTEEEEEEECCCCCCCBTTB
T ss_pred EecCCCceEEEEcCCCceeeeecCCCCeEccCCCcceeEeeeccccccCCCCEEEEEeccCCceEEeccccCcccccccc
Confidence 99998874322 222110 01223799999988754 3344 99999988765221
Q ss_pred ---eeeeEEEccchh
Q psy7108 288 ---FLLDISITPQSV 299 (703)
Q Consensus 288 ---~~~~~~~spd~~ 299 (703)
.....+|+||+.
T Consensus 349 ~~~~~~~~~~spDg~ 363 (388)
T 3pe7_A 349 RQVTHPHPSFTPDDK 363 (388)
T ss_dssp SSTTCCCCEECTTSS
T ss_pred cccCCCCccCCCCCC
Confidence 134568999983
No 168
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.59 E-value=4.4e-14 Score=150.45 Aligned_cols=243 Identities=11% Similarity=0.061 Sum_probs=158.2
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC-CCceeEEEecC--CCcEEEEEEecCCCE--EEEEE----------
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV-ETDTQHETIQL--LSDALCVAYKPDGTE--IVVAT---------- 110 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~-~~~~~~~~~~~--~~~V~~v~~spdg~~--las~s---------- 110 (703)
+...+..++|+| ++++|++++.+ .|.+|++. +++. .....+ .+.+.+++|+|||+. ++++.
T Consensus 38 ~~~~~~~~a~sp--dg~~l~~~~~~-~v~~~~~~~~g~~-~~~~~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 113 (365)
T 1jof_A 38 QDEPISWMTFDH--ERKNIYGAAMK-KWSSFAVKSPTEI-VHEASHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYANP 113 (365)
T ss_dssp TTCCCSEEEECT--TSSEEEEEEBT-EEEEEEEEETTEE-EEEEEEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEEEE
T ss_pred CCCCCcEEEECC--CCCEEEEEccc-eEEEEEECCCCCE-EEeeEeecCCCCccEEECCCCCEEEEEEecCCcceeccce
Confidence 445788999999 99999999888 99999997 5543 222222 133556899999994 44543
Q ss_pred ---CCCeEEEEEcC-CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECC-C
Q psy7108 111 ---LDGQLIMFDVE-SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSR-E 184 (703)
Q Consensus 111 ---~dg~I~vwd~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~-~ 184 (703)
.++.+.+|+++ +++....+..... .+...+.+++|+|||+++++++. ++.|++||+. +
T Consensus 114 ~~~~~g~v~v~~~~~~g~~~~~~~~~~~----------------~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~ 177 (365)
T 1jof_A 114 FYKFAGYGNVFSVSETGKLEKNVQNYEY----------------QENTGIHGMVFDPTETYLYSADLTANKLWTHRKLAS 177 (365)
T ss_dssp ESSSCCEEEEEEECTTCCEEEEEEEEEC----------------CTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred eecCCceEEEEccCCCCcCcceEeeEEe----------------CCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCC
Confidence 68999999997 4655444332100 01236899999999998887754 6789999998 6
Q ss_pred CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC--CCCccce------eecC----Ccc
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV--KKGDMAA------RVLK----PEV 252 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~--~~~~~~~------~~~~----h~~ 252 (703)
++......... ..+...+..++|+|||+.++++...+ ..+.+|+. .+++... .+.. +..
T Consensus 178 g~~~~~~~~~~----~~~g~~p~~~~~spdg~~l~v~~~~~-----~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~ 248 (365)
T 1jof_A 178 GEVELVGSVDA----PDPGDHPRWVAMHPTGNYLYALMEAG-----NRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDP 248 (365)
T ss_dssp SCEEEEEEEEC----SSTTCCEEEEEECTTSSEEEEEETTT-----TEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCT
T ss_pred CCEEEeeeEec----CCCCCCCCEeEECCCCCEEEEEECCC-----CeEEEEEEeCCCCcEEEccceEEcCCCCcCCccc
Confidence 76532211110 00123577899999999888766432 36777754 3555321 1111 122
Q ss_pred ------ceEEEE-EcCCCCEEEEEe--CC-----CEEEEEcC-CCceec---ce------eeeEEEcc---chhhhHhhc
Q psy7108 253 ------RVFCVK-FSPTGQAWVAAT--TE-----GVHIYSLD-SGYVFD---PF------LLDISITP---QSVKEALAD 305 (703)
Q Consensus 253 ------~V~~l~-~spdg~~l~s~s--~D-----gv~iwd~~-~~~~~~---~~------~~~~~~sp---d~~~~~l~s 305 (703)
.+.+++ |+|||++|++++ .+ .|.+|+++ +++... .. ...++|+| ++ ..++.
T Consensus 249 ~~~~~~~~~~i~~~spdG~~l~v~~~~~~~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg--~~l~v 326 (365)
T 1jof_A 249 ETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSD--EWMAI 326 (365)
T ss_dssp TTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCT--TEEEE
T ss_pred ccccccccccEEEECCCCCEEEEECCCCCCCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCC--CEEEE
Confidence 588999 999999987654 34 49999986 555432 11 24578889 78 55555
Q ss_pred CCc-ceEEEEEEecCc
Q psy7108 306 KDY-AKALMMSLKLNE 320 (703)
Q Consensus 306 g~~-~~~l~la~~l~~ 320 (703)
.+. ++.+.+ |+++.
T Consensus 327 ~~~~~~~v~v-~~~~~ 341 (365)
T 1jof_A 327 TDDQEGWLEI-YRWKD 341 (365)
T ss_dssp ECSSSCEEEE-EEEET
T ss_pred EEcCCCeEEE-EEEch
Confidence 544 467776 66543
No 169
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.57 E-value=7.6e-14 Score=148.58 Aligned_cols=231 Identities=13% Similarity=0.129 Sum_probs=150.8
Q ss_pred ceeecc--CCCcccccccc--CCCcCeEEEEEcCCCCCCE--EEEEe-------------CCCcEEEEEcCC-CceeEEE
Q psy7108 28 VKKGDM--AARVLKPEVLS--GHEGPVSCIEFSPVLSSTG--MVSAS-------------WDKTVKLWNAVE-TDTQHET 87 (703)
Q Consensus 28 v~~~d~--tg~~~~~~~l~--gH~~~V~~l~~sp~~dg~~--L~sgs-------------~Dg~V~iWd~~~-~~~~~~~ 87 (703)
+..|+. +|++. .... .+ +...+++|+| +|++ +++++ .+|++++|++.. ++.....
T Consensus 62 v~~~~~~~~g~~~--~~~~~~~~-g~~~~~~~sp--dg~~l~~~~~~~~~~~~~~~~~~~~~g~v~v~~~~~~g~~~~~~ 136 (365)
T 1jof_A 62 WSSFAVKSPTEIV--HEASHPIG-GHPRANDADT--NTRAIFLLAAKQPPYAVYANPFYKFAGYGNVFSVSETGKLEKNV 136 (365)
T ss_dssp EEEEEEEETTEEE--EEEEEECC-SSGGGGCTTS--CCEEEEEEECSSTTCCEEEEEESSSCCEEEEEEECTTCCEEEEE
T ss_pred EEEEEECCCCCEE--EeeEeecC-CCCccEEECC--CCCEEEEEEecCCcceeccceeecCCceEEEEccCCCCcCcceE
Confidence 555653 56654 3322 11 2356689999 9984 55553 689999999974 4332222
Q ss_pred e----cCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcC-CCcEEE--EEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108 88 I----QLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVE-SAAQVG--SVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159 (703)
Q Consensus 88 ~----~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~-~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i 159 (703)
. .+...+.+++|+|||++++++.. ++.|++||++ +++... .+.... ++..+..+
T Consensus 137 ~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~------------------~g~~p~~~ 198 (365)
T 1jof_A 137 QNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPD------------------PGDHPRWV 198 (365)
T ss_dssp EEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSS------------------TTCCEEEE
T ss_pred eeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCC------------------CCCCCCEe
Confidence 2 24567999999999998887764 6799999998 676432 222100 12368899
Q ss_pred EEcCCCCEEEEEec-CCcEEEEECC--CCceEE---EEEeccCCccccccc------cceeee-eccCCCEEEEEcccCC
Q psy7108 160 CYSADGSCILAAGQ-SKYICIYSSR--EGILLK---KFTITQNKSLDGIND------FINRRK-MTEFGNVSLIETRETH 226 (703)
Q Consensus 160 ~~spdg~~l~s~s~-dg~I~lwD~~--~~~~~~---~~~~~~~~~~~~~~~------~v~~~~-~spdg~~l~~~~~~~~ 226 (703)
+|+|||+++++++. ++.|.+|++. +++... .+..... ...++.. .+..++ |+|||++++++.....
T Consensus 199 ~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~i~~~spdG~~l~v~~~~~~ 277 (365)
T 1jof_A 199 AMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPP-GIPDRDPETGKGLYRADVCALTFSGKYMFASSRANK 277 (365)
T ss_dssp EECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCT-TCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESS
T ss_pred EECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCC-CcCCcccccccccccccEEEECCCCCEEEEECCCCC
Confidence 99999999988764 6889999865 465432 2221110 0112222 467899 9999998887664321
Q ss_pred CCCeeEEECCCCC-CCccce---eecCCccceEEEEEcC---CCCEEEEEeCC-C-EEEEEcCCC
Q psy7108 227 EGGNVVLKLPGVK-KGDMAA---RVLKPEVRVFCVKFSP---TGQAWVAATTE-G-VHIYSLDSG 282 (703)
Q Consensus 227 ~~~~~~i~iwd~~-~~~~~~---~~~~h~~~V~~l~~sp---dg~~l~s~s~D-g-v~iwd~~~~ 282 (703)
......|.+|++. +++... ....+...+..++|+| ||++|++++.+ + |.+|+++..
T Consensus 278 ~~~~~~i~v~~~~~~g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 278 FELQGYIAGFKLRDCGSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp TTSCCEEEEEEECTTSCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred CCCCCeEEEEEECCCCCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 1111279999886 565432 1333445567899999 89999998875 5 999998765
No 170
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.56 E-value=7.4e-13 Score=140.35 Aligned_cols=211 Identities=13% Similarity=0.222 Sum_probs=137.6
Q ss_pred ccCCCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeE---EEecC-----------CCcEEEEEEecCCCEEE
Q psy7108 43 LSGHEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQH---ETIQL-----------LSDALCVAYKPDGTEIV 107 (703)
Q Consensus 43 l~gH~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~---~~~~~-----------~~~V~~v~~spdg~~la 107 (703)
...+......+++ ++++|++++ .++.|.+|++....... ....+ ...+.+++|+|||++++
T Consensus 95 ~~~~~~~p~~~~~----dg~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~spdg~~l~ 170 (361)
T 3scy_A 95 QKTMGADPCYLTT----NGKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDKERQTMPHLHCVRITPDGKYLL 170 (361)
T ss_dssp EECSSSCEEEEEE----CSSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCTTTCSSCCEEEEEECTTSSEEE
T ss_pred eccCCCCcEEEEE----CCCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCccccCCCcceEEEECCCCCEEE
Confidence 3345556667776 356666655 68899999997543321 11111 23468899999999776
Q ss_pred EEEC-CCeEEEEEcCCCcE------E------EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-c
Q psy7108 108 VATL-DGQLIMFDVESAAQ------V------GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-Q 173 (703)
Q Consensus 108 s~s~-dg~I~vwd~~~~~~------~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~ 173 (703)
+++. ++.|.+|+++.... + ...... .......++|+|||+++++++ .
T Consensus 171 ~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~-------------------~~~~~~~~~~spdg~~l~v~~~~ 231 (361)
T 3scy_A 171 ADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVA-------------------PGSGPRHLIFNSDGKFAYLINEI 231 (361)
T ss_dssp EEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECC-------------------TTCCEEEEEECTTSSEEEEEETT
T ss_pred EEeCCCCEEEEEEEcCCCCcccccceeecccccceecC-------------------CCCCCeEEEEcCCCCEEEEEcCC
Confidence 6654 78999999875431 1 111111 122578899999999888777 6
Q ss_pred CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCc--cceeecC
Q psy7108 174 SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGD--MAARVLK 249 (703)
Q Consensus 174 dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~--~~~~~~~ 249 (703)
++.|.+||+.+++.......... .........++|+|||++++++...+ ...+.+|++. +++ .+.....
T Consensus 232 ~~~v~v~~~~~g~~~~~~~~~~~---~~~~~~~~~i~~spdg~~l~v~~~~~----~~~i~v~~~~~~~g~~~~~~~~~~ 304 (361)
T 3scy_A 232 GGTVIAFRYADGMLDEIQTVAAD---TVNAQGSGDIHLSPDGKYLYASNRLK----ADGVAIFKVDETNGTLTKVGYQLT 304 (361)
T ss_dssp TCEEEEEEEETTEEEEEEEEESC---SSCCCCEEEEEECTTSSEEEEEECSS----SCEEEEEEECTTTCCEEEEEEEEC
T ss_pred CCeEEEEEecCCceEEeEEEecC---CCCCCCcccEEECCCCCEEEEECCCC----CCEEEEEEEcCCCCcEEEeeEecC
Confidence 88999999987754322221111 11122457899999999987766541 1379999875 444 3333333
Q ss_pred CccceEEEEEcCCCCEEEEEeC-CC-EEEEEcC--CCce
Q psy7108 250 PEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLD--SGYV 284 (703)
Q Consensus 250 h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~--~~~~ 284 (703)
...+.+++|+|||++|++++. ++ +.+|+++ +++.
T Consensus 305 -g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~ 342 (361)
T 3scy_A 305 -GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLL 342 (361)
T ss_dssp -SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCE
T ss_pred -CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcE
Confidence 456789999999999988874 45 8886554 5554
No 171
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.56 E-value=5.3e-13 Score=141.85 Aligned_cols=238 Identities=12% Similarity=0.138 Sum_probs=155.7
Q ss_pred eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC------CC
Q psy7108 30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL------LS 92 (703)
Q Consensus 30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~------~~ 92 (703)
.|| .+++++ ..+..+..+ .++|+| |++++++++ .+++|.+||..+.+....+... ..
T Consensus 35 v~D~~t~~~~--~~i~~g~~p--~i~~sp--dg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g~ 108 (361)
T 2oiz_A 35 VYDYTNGKFL--GMVPTAFNG--HVQVSN--DGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGLN 108 (361)
T ss_dssp EEETTTCCEE--EEEECCEEE--EEEECT--TSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBCC
T ss_pred EEECCCCeEE--EEecCCCCC--ceEECC--CCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccCC
Confidence 344 477877 777777666 899999 999999886 3678999999887665554422 24
Q ss_pred cEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-CEE
Q psy7108 93 DALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-SCI 168 (703)
Q Consensus 93 ~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~~l 168 (703)
....++++|||++|+++.. +++|.+||+.+++.+.. +.... ...+.+.|++ ..+
T Consensus 109 ~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~----------------------~~~v~~~p~~~~~~ 166 (361)
T 2oiz_A 109 YDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG----------------------CWSVIPQPNRPRSF 166 (361)
T ss_dssp CGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT----------------------EEEEEECTTSSSEE
T ss_pred CcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC----------------------cceeEEcCCCCeeE
Confidence 5677999999999998874 57899999999988776 44321 1112333332 333
Q ss_pred EEEecCCcEEEEECCC-CceE-------------------------------------------------EEEEeccCCc
Q psy7108 169 LAAGQSKYICIYSSRE-GILL-------------------------------------------------KKFTITQNKS 198 (703)
Q Consensus 169 ~s~s~dg~I~lwD~~~-~~~~-------------------------------------------------~~~~~~~~~~ 198 (703)
++.+.||.+.+|+... ++.. ..+.......
T Consensus 167 ~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~ 246 (361)
T 2oiz_A 167 MTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDED 246 (361)
T ss_dssp EEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHH
T ss_pred EEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccc
Confidence 3344444444444332 2211 1111000000
Q ss_pred c-cc-ccccceeeeeccCCCEEEEEcc-cCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108 199 L-DG-INDFINRRKMTEFGNVSLIETR-ETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 199 ~-~~-~~~~v~~~~~spdg~~l~~~~~-~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~ 271 (703)
. .+ .......++++|+++.+++... ++. .+....|.+||..+++.+..+..+. +.+++|+|||++|++++.
T Consensus 247 ~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~--p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 247 KAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD--ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp HHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT--CCEEEEETTTTEEEEECS
T ss_pred cccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC--eeEEEECCCCCEEEEeCC
Confidence 0 00 0001123689999888877654 111 1112489999999999988888776 999999999999988887
Q ss_pred CC-EEEEEcCCC--ceecce------eeeEEEccch
Q psy7108 272 EG-VHIYSLDSG--YVFDPF------LLDISITPQS 298 (703)
Q Consensus 272 Dg-v~iwd~~~~--~~~~~~------~~~~~~spd~ 298 (703)
+ |.+||..++ +.+..+ ...+.++|+|
T Consensus 325 -~~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G 359 (361)
T 2oiz_A 325 -GNVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVG 359 (361)
T ss_dssp -SCEEEEECSSSSCEEEEEETTSCSSEEEEEECCCS
T ss_pred -CeEEEEECCCCcceeeEEeccCCCCcEEEEecCCC
Confidence 6 999999999 776553 2568888887
No 172
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=99.54 E-value=1.5e-15 Score=176.04 Aligned_cols=206 Identities=8% Similarity=0.040 Sum_probs=134.9
Q ss_pred cCCCcCeEEEEEcCCCCCCEEEEE-----eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC-----
Q psy7108 44 SGHEGPVSCIEFSPVLSSTGMVSA-----SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG----- 113 (703)
Q Consensus 44 ~gH~~~V~~l~~sp~~dg~~L~sg-----s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg----- 113 (703)
.+|...+.+++||| ||++||.+ +.+.+|++||+.+++....... ......++|+ ||+.|+.++.+.
T Consensus 125 ~~~~~~l~~~~~Sp--Dg~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~~~~-~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~ 200 (693)
T 3iuj_A 125 PDGTTALDQLSFSR--DGRILAYSLSLAGSDWREIHLMDVESKQPLETPLK-DVKFSGISWL-GNEGFFYSSYDKPDGSE 200 (693)
T ss_dssp TTSCCEEEEEEECT--TSSEEEEEEECSSCCEEEEEEEETTTCSEEEEEEE-EEESCCCEEE-TTTEEEEEESSCCC---
T ss_pred CCCcEEEEEEEECC--CCCEEEEEEecCCCceEEEEEEECCCCCCCccccC-CceeccEEEe-CCCEEEEEEecCccccc
Confidence 35667899999999 99998854 2335799999999875433221 1112568899 999999998874
Q ss_pred --------eEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec----CCcEEE
Q psy7108 114 --------QLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ----SKYICI 179 (703)
Q Consensus 114 --------~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~----dg~I~l 179 (703)
.|++|++.++.. ...+..... +...+..+.|+|||++|+.... ++.|++
T Consensus 201 ~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~-----------------~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~ 263 (693)
T 3iuj_A 201 LSARTDQHKVYFHRLGTAQEDDRLVFGAIPA-----------------QHHRYVGATVTEDDRFLLISAANSTSGNRLYV 263 (693)
T ss_dssp ----CCCCEEEEEETTSCGGGCEEEESCSGG-----------------GCCSEEEEEECTTSCEEEEEEESSSSCCEEEE
T ss_pred ccccCCCcEEEEEECCCCcccceEEEecCCC-----------------CCeEEEEEEEcCCCCEEEEEEccCCCCcEEEE
Confidence 399999987643 223322110 1124678999999999875432 247999
Q ss_pred EECCCCc-eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEE
Q psy7108 180 YSSREGI-LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFC 256 (703)
Q Consensus 180 wD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~ 256 (703)
+|+.++. ....+..+.. ..... ++++|..+++.+..+ .....|..+|+.++.. ...+..|...+.
T Consensus 264 ~d~~~~~~~~~~l~~~~~--------~~~~~-~~~~g~~l~~~t~~~--~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~- 331 (693)
T 3iuj_A 264 KDLSQENAPLLTVQGDLD--------ADVSL-VDNKGSTLYLLTNRD--APNRRLVTVDAANPGPAHWRDLIPERQQVL- 331 (693)
T ss_dssp EETTSTTCCCEEEECSSS--------SCEEE-EEEETTEEEEEECTT--CTTCEEEEEETTSCCGGGCEEEECCCSSCE-
T ss_pred EECCCCCCceEEEeCCCC--------ceEEE-EeccCCEEEEEECCC--CCCCEEEEEeCCCCCccccEEEecCCCCEE-
Confidence 9998763 3344443222 22233 677887777666543 2234788889887654 244555655554
Q ss_pred EEEcCCCCEEEEEe-CCC---EEEEEcCCCc
Q psy7108 257 VKFSPTGQAWVAAT-TEG---VHIYSLDSGY 283 (703)
Q Consensus 257 l~~spdg~~l~s~s-~Dg---v~iwd~~~~~ 283 (703)
.|+++++.|+... .++ |++|+++++.
T Consensus 332 -~~s~~g~~lv~~~~~~g~~~l~~~d~~g~~ 361 (693)
T 3iuj_A 332 -TVHSGSGYLFAEYMVDATARVEQFDYEGKR 361 (693)
T ss_dssp -EEEEETTEEEEEEEETTEEEEEEECTTSCE
T ss_pred -EEEEECCEEEEEEEECCeeEEEEEECCCCe
Confidence 8999999886555 454 7888887554
No 173
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.53 E-value=9e-13 Score=138.14 Aligned_cols=250 Identities=12% Similarity=0.174 Sum_probs=171.0
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCC------------------------CcEEEEEcCCCceeEEEe-cCCCcEEEEEEec
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWD------------------------KTVKLWNAVETDTQHETI-QLLSDALCVAYKP 101 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~D------------------------g~V~iWd~~~~~~~~~~~-~~~~~V~~v~~sp 101 (703)
-+.+.+++++| +|+++++.+.+ ++|.+||..+++...... .+-..+..++++|
T Consensus 23 l~~v~~va~d~--~G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~p~gia~d~ 100 (329)
T 3fvz_A 23 PGQVSGVALDS--KNNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGKNLFYLPHGLSIDT 100 (329)
T ss_dssp CSCEEEEEECT--TCCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECTTTCSSEEEEEECT
T ss_pred cCCceEEEECC--CCCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCCCccCCceEEEECC
Confidence 46799999999 99999988877 479999988776543332 2345789999999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEe-cCCcEE
Q psy7108 102 DGTEIVVATLDGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAG-QSKYIC 178 (703)
Q Consensus 102 dg~~las~s~dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s-~dg~I~ 178 (703)
+|+.+++...++.|++||.+... .+..+..... .+ ....+......++++| ++..+++.+ .++.|+
T Consensus 101 ~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~--~g---------~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 101 DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQ--PG---------SDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTB--CC---------CSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCC--CC---------CCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 99988888888999999986542 3444422100 00 0011223678999999 788888776 689999
Q ss_pred EEECCCCceEEEEEeccCC--ccccccccceeeeeccC-CCEEEEEcccCCCCCeeEEECCCCCCCccceeec--CCccc
Q psy7108 179 IYSSREGILLKKFTITQNK--SLDGINDFINRRKMTEF-GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL--KPEVR 253 (703)
Q Consensus 179 lwD~~~~~~~~~~~~~~~~--~~~~~~~~v~~~~~spd-g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~--~h~~~ 253 (703)
+|| .+++.+..+...... ...+.......++++|+ +..+++.... ..|++||..+++.+..+. .+...
T Consensus 170 ~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~------~~I~~~~~~~G~~~~~~~~~~~~~~ 242 (329)
T 3fvz_A 170 QFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADREN------GRIQCFKTDTKEFVREIKHASFGRN 242 (329)
T ss_dssp EEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTT------TEEEEEETTTCCEEEEECCTTTTTC
T ss_pred EEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCC------CEEEEEECCCCcEEEEEeccccCCC
Confidence 999 567777666432211 01122235788999999 5555544433 389999998888777664 35567
Q ss_pred eEEEEEcC------CCCEEEEEeCCC-EEEEEcCCCceecce---------eeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 254 VFCVKFSP------TGQAWVAATTEG-VHIYSLDSGYVFDPF---------LLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 254 V~~l~~sp------dg~~l~s~s~Dg-v~iwd~~~~~~~~~~---------~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
+.+++|+| +|+..++...+. +++|+..+++....+ ...++++|++ .++.+...+..|.. |+
T Consensus 243 ~~~~~~~pg~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~~~dG--~lyvad~~~~~I~~-~~ 319 (329)
T 3fvz_A 243 VFAISYIPGFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVASEDG--TVYIGDAHTNTVWK-FT 319 (329)
T ss_dssp EEEEEEETTEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEECTTS--EEEEEESSSCCEEE-EE
T ss_pred cceeeecCCEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEECCCC--CEEEEECCCCEEEE-Ee
Confidence 88999999 333222233344 899999888876554 3578999999 56666666667666 65
Q ss_pred cC
Q psy7108 318 LN 319 (703)
Q Consensus 318 l~ 319 (703)
+.
T Consensus 320 ~~ 321 (329)
T 3fvz_A 320 LT 321 (329)
T ss_dssp EE
T ss_pred CC
Confidence 54
No 174
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.52 E-value=5.6e-14 Score=150.38 Aligned_cols=249 Identities=8% Similarity=-0.059 Sum_probs=156.3
Q ss_pred cCCCccccccccCCCcC-----eEEEEEcCCCCCCEEEEEeCC---CcEEEEEcCCCceeEEEecCCCcEE-EEEEecCC
Q psy7108 33 MAARVLKPEVLSGHEGP-----VSCIEFSPVLSSTGMVSASWD---KTVKLWNAVETDTQHETIQLLSDAL-CVAYKPDG 103 (703)
Q Consensus 33 ~tg~~~~~~~l~gH~~~-----V~~l~~sp~~dg~~L~sgs~D---g~V~iWd~~~~~~~~~~~~~~~~V~-~v~~spdg 103 (703)
.+|+.+ +.+..+... +.+++|+| ||++|+.++.+ ..|.+||+.+++ ...+..+...+. .+.|+|||
T Consensus 18 ~~g~~~--~~l~~~~~~~~~~~~~~~~~Sp--dG~~l~~~~~~~g~~~l~~~d~~~~~-~~~l~~~~~~~~~~~~~spdg 92 (396)
T 3c5m_A 18 DTQVKV--TRLTPTDIICHRNYFYQKCFTQ--DGKKLLFAGDFDGNRNYYLLNLETQQ-AVQLTEGKGDNTFGGFISTDE 92 (396)
T ss_dssp TTCCEE--EECSCTTSCEECCCTTSCCBCT--TSCEEEEEECTTSSCEEEEEETTTTE-EEECCCSSCBCTTTCEECTTS
T ss_pred CCCcce--EEEecCCCCccceeeecCcCCC--CCCEEEEEEecCCCceEEEEECCCCc-EEEeecCCCCccccceECCCC
Confidence 466666 667665444 78889999 99998877543 367888987764 344444444433 37899999
Q ss_pred CEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC--CccEEEEEEcCCCCEEEEE-----ecCCc
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK--AKAVSTVCYSADGSCILAA-----GQSKY 176 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~V~~i~~spdg~~l~s~-----s~dg~ 176 (703)
+.|++++.++.|++||+.+++.......+...... ........... ......++|+|+++.++.+ ..+..
T Consensus 93 ~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~---g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~ 169 (396)
T 3c5m_A 93 RAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGY---GTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCR 169 (396)
T ss_dssp SEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEE---EEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEE
T ss_pred CEEEEEEcCCcEEEEECCCCCcEEEEecccccCCC---CCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcce
Confidence 99999999999999999998876655543220000 00000000000 0000014578888877654 35668
Q ss_pred EEEEECCCCceEEEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccce
Q psy7108 177 ICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRV 254 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V 254 (703)
|.+||+.+++...... . ...+..+.|+| +++.+++.+..+.......|.+||+..++........ ...+
T Consensus 170 l~~~d~~~g~~~~~~~-~--------~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~~ 240 (396)
T 3c5m_A 170 LIKVDIETGELEVIHQ-D--------TAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGESC 240 (396)
T ss_dssp EEEEETTTCCEEEEEE-E--------SSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEEE
T ss_pred EEEEECCCCcEEeecc-C--------CcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCccc
Confidence 9999999887655442 1 22577899999 7887776654321111135777887665533332221 3468
Q ss_pred EEEEEcCCCCEEEEEeCC-----C-EEEEEcCCCceecce---eeeEEEcc-ch
Q psy7108 255 FCVKFSPTGQAWVAATTE-----G-VHIYSLDSGYVFDPF---LLDISITP-QS 298 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s~D-----g-v~iwd~~~~~~~~~~---~~~~~~sp-d~ 298 (703)
..++|+|||+.|+.++.+ + |.+||+.+++..... .....|+| ++
T Consensus 241 ~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~s~~dg 294 (396)
T 3c5m_A 241 THEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVMVMPPCSHLMSNFDG 294 (396)
T ss_dssp EEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEEECCSEEEEEECSSS
T ss_pred cceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEeeeCCCCCCCccCCCC
Confidence 889999999988776543 4 899999887643211 12278888 88
No 175
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.48 E-value=1.1e-12 Score=151.03 Aligned_cols=214 Identities=13% Similarity=0.042 Sum_probs=142.3
Q ss_pred ccccC-----CCcCeEEEEEcCCCCCCEEEEEeCC----------CcEEEEEcCCC-----ceeEEEe-cCCCcEEEEEE
Q psy7108 41 EVLSG-----HEGPVSCIEFSPVLSSTGMVSASWD----------KTVKLWNAVET-----DTQHETI-QLLSDALCVAY 99 (703)
Q Consensus 41 ~~l~g-----H~~~V~~l~~sp~~dg~~L~sgs~D----------g~V~iWd~~~~-----~~~~~~~-~~~~~V~~v~~ 99 (703)
+.+.. |...+.+++|+| ||+.|++++.| .+|++||+.+. .....+. .+...+..++|
T Consensus 118 ~~l~~~~~~~~~~~~~~~~~sp--Dg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 195 (662)
T 3azo_A 118 RPLTPVSAVGGGLRWADPVLLP--ERGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVRELSDDAHRFVTGPRL 195 (662)
T ss_dssp EECSCCCCSTTCEEEEEEEEET--TTTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSEESSCSCSSEECCCEE
T ss_pred EeccCCccCCCCccccCcEECC--CCCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCceeEEEecCCCcccCceE
Confidence 56666 778899999999 99999999877 58999999872 3445555 55677888999
Q ss_pred ecCCCEEEEEECCC--------eEEEEEcC-CC---cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108 100 KPDGTEIVVATLDG--------QLIMFDVE-SA---AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC 167 (703)
Q Consensus 100 spdg~~las~s~dg--------~I~vwd~~-~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~ 167 (703)
||||+.|++++.++ .|++||++ ++ +......++.. .+..++|+|||++
T Consensus 196 SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~--------------------~~~~~~~spdg~l 255 (662)
T 3azo_A 196 SPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE--------------------AIAQAEWAPDGSL 255 (662)
T ss_dssp CTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB--------------------CEEEEEECTTSCE
T ss_pred CCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc--------------------eEcceEECCCCeE
Confidence 99999999887553 79999998 56 33333333222 6889999999997
Q ss_pred EEEEecCC--cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC--CCCCCcc
Q psy7108 168 ILAAGQSK--YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP--GVKKGDM 243 (703)
Q Consensus 168 l~s~s~dg--~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw--d~~~~~~ 243 (703)
+++++.++ .|.+||+.+++.......+...........+..++|+|+++.++++.. + .+++| |..+++
T Consensus 256 ~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~------~~~l~~~d~~~~~- 327 (662)
T 3azo_A 256 IVATDRTGWWNLHRVDPATGAATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-G------AAVLGILDPESGE- 327 (662)
T ss_dssp EEEECTTSSCEEEEECTTTCCEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-S------SCEEEEEETTTTE-
T ss_pred EEEECCCCCeEEEEEECCCCceeecccccccccCccccccCceEeEeCCCEEEEEEEc-C------ccEEEEEECCCCc-
Confidence 77777787 677777767765433221111000000011467889999998777664 3 34555 666555
Q ss_pred ceeecCCccceEEE-EEcCCCCEEEEEeCCC---EEEEEcCCCce
Q psy7108 244 AARVLKPEVRVFCV-KFSPTGQAWVAATTEG---VHIYSLDSGYV 284 (703)
Q Consensus 244 ~~~~~~h~~~V~~l-~~spdg~~l~s~s~Dg---v~iwd~~~~~~ 284 (703)
...+..+...+..+ +++++.-.+++++.+. +.++++.+++.
T Consensus 328 ~~~l~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~i~~~d~~~g~~ 372 (662)
T 3azo_A 328 LVDAAGPWTEWAATLTVSGTRAVGVAASPRTAYEVVELDTVTGRA 372 (662)
T ss_dssp EEECCSSCCEEEEEEEEETTEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred EEEecCCCCeEEEEEecCCCEEEEEEcCCCCCCEEEEEECCCCce
Confidence 45666677777776 4443332334555554 44556666654
No 176
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.48 E-value=1.5e-11 Score=125.64 Aligned_cols=234 Identities=14% Similarity=0.187 Sum_probs=164.0
Q ss_pred cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec------CCCcEEEEEEe-cCCCEEEEEEC-CCeE
Q psy7108 44 SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ------LLSDALCVAYK-PDGTEIVVATL-DGQL 115 (703)
Q Consensus 44 ~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~s-pdg~~las~s~-dg~I 115 (703)
.+|-....+++++| ++.++++.+.++.|++||.. ++....... +...+.+++++ +++..+++... ++.|
T Consensus 26 ~g~~~~p~~v~~~~--~g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNA--QNDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECT--TCCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECC--CCCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 35667789999999 99999988889999999976 434333321 23468899995 66666655533 8899
Q ss_pred EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108 116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ 195 (703)
Q Consensus 116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~ 195 (703)
.+|| .+++.+..+.... ...+..++++|+|+.+++...++.|.+||.. ++.+..+...
T Consensus 103 ~~~d-~~g~~~~~~~~~~-------------------~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~- 160 (286)
T 1q7f_A 103 QIYN-QYGQFVRKFGATI-------------------LQHPRGVTVDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCS- 160 (286)
T ss_dssp EEEC-TTSCEEEEECTTT-------------------CSCEEEEEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECT-
T ss_pred EEEC-CCCcEEEEecCcc-------------------CCCceEEEEeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCC-
Confidence 9999 5677666553321 1257899999999988877778899999964 5555555421
Q ss_pred CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC--ccceEEEEEcCCCCEEEEEeCC-
Q psy7108 196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--EVRVFCVKFSPTGQAWVAATTE- 272 (703)
Q Consensus 196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--~~~V~~l~~spdg~~l~s~s~D- 272 (703)
+....+..++++++|+.+++...+ ..|++||.. ++.+..+..+ ...+.+++++|+|+.+++...+
T Consensus 161 -----~~~~~p~~i~~~~~g~l~v~~~~~------~~i~~~~~~-g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~ 228 (286)
T 1q7f_A 161 -----KHLEFPNGVVVNDKQEIFISDNRA------HCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN 228 (286)
T ss_dssp -----TTCSSEEEEEECSSSEEEEEEGGG------TEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred -----CccCCcEEEEECCCCCEEEEECCC------CEEEEEcCC-CCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCC
Confidence 112356889999999866665543 379999874 4444444332 3568999999999988888766
Q ss_pred C-EEEEEcCCCceecce--------eeeEEEccchhhhHhhcCCcceEEEEEEecC
Q psy7108 273 G-VHIYSLDSGYVFDPF--------LLDISITPQSVKEALADKDYAKALMMSLKLN 319 (703)
Q Consensus 273 g-v~iwd~~~~~~~~~~--------~~~~~~spd~~~~~l~sg~~~~~l~la~~l~ 319 (703)
+ |.+|+.+ ++.+..+ ...++++|++ .++.+ +.++.+.+ |+..
T Consensus 229 ~~i~~~~~~-g~~~~~~~~~~~~~~~~~i~~~~~g--~l~vs-~~~~~v~v-~~~~ 279 (286)
T 1q7f_A 229 FNLTIFTQD-GQLISALESKVKHAQCFDVALMDDG--SVVLA-SKDYRLYI-YRYV 279 (286)
T ss_dssp CEEEEECTT-SCEEEEEEESSCCSCEEEEEEETTT--EEEEE-ETTTEEEE-EECS
T ss_pred EEEEEECCC-CCEEEEEcccCCCCcceeEEECCCC--cEEEE-CCCCeEEE-EEcc
Confidence 3 9999964 4443322 2468899998 55555 45778877 7764
No 177
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.47 E-value=7.6e-12 Score=131.01 Aligned_cols=232 Identities=10% Similarity=0.041 Sum_probs=160.4
Q ss_pred ceeecc-CCCcccccccc-CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc-eeEEEe---------cCCCcEE
Q psy7108 28 VKKGDM-AARVLKPEVLS-GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-TQHETI---------QLLSDAL 95 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~-gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-~~~~~~---------~~~~~V~ 95 (703)
+..+|. +|+++ ..+. ++-....+++++| +|+++++.+.++.|++|+..... .+..+- .+-....
T Consensus 71 i~~~d~~~g~~~--~~~~~~~~~~p~gia~d~--~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~ 146 (329)
T 3fvz_A 71 ILVIDPNNAEIL--QSSGKNLFYLPHGLSIDT--DGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPT 146 (329)
T ss_dssp EEEECTTTCCEE--EEECTTTCSSEEEEEECT--TSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEE
T ss_pred EEEEECCCCeEE--eccCCCccCCceEEEECC--CCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCc
Confidence 566775 57776 5443 4556889999999 99999998889999999975542 233331 2334689
Q ss_pred EEEEec-CCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEe
Q psy7108 96 CVAYKP-DGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAG 172 (703)
Q Consensus 96 ~v~~sp-dg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s 172 (703)
.++++| ++..+++.+ .++.|++|| .+++.+..+.....-. .....+-.....++++|+ +..+++..
T Consensus 147 ~ia~~~~~g~lyv~d~~~~~~I~~~~-~~g~~~~~~~~~g~~~----------~~~~~~~~~p~gia~d~~~g~l~v~d~ 215 (329)
T 3fvz_A 147 DVAVEPSTGAVFVSDGYCNSRIVQFS-PSGKFVTQWGEESSGS----------SPRPGQFSVPHSLALVPHLDQLCVADR 215 (329)
T ss_dssp EEEECTTTCCEEEEECSSCCEEEEEC-TTSCEEEEECEECCSS----------SCCTTEESCEEEEEEETTTTEEEEEET
T ss_pred EEEEeCCCCeEEEEeCCCCCeEEEEc-CCCCEEEEeccCCCCC----------CCCCcccCCCcEEEEECCCCEEEEEEC
Confidence 999999 788777776 689999999 5677766664322100 000011124789999998 66666777
Q ss_pred cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccC-CCCCeeEEECCCCCCCccceeec---
Q psy7108 173 QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRET-HEGGNVVLKLPGVKKGDMAARVL--- 248 (703)
Q Consensus 173 ~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~-~~~~~~~i~iwd~~~~~~~~~~~--- 248 (703)
.++.|++||..+++.+..+.... +...+..++++| +..+...+... .+.....+++||..+++.+..+.
T Consensus 216 ~~~~I~~~~~~~G~~~~~~~~~~------~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~ 288 (329)
T 3fvz_A 216 ENGRIQCFKTDTKEFVREIKHAS------FGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVR 288 (329)
T ss_dssp TTTEEEEEETTTCCEEEEECCTT------TTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSS
T ss_pred CCCEEEEEECCCCcEEEEEeccc------cCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCC
Confidence 78899999999888888775331 223566788888 43333322110 01122479999999998877763
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 249 KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 249 ~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
.+...+.+++++|+|..+++...++ |++|+++.
T Consensus 289 ~~~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~ 322 (329)
T 3fvz_A 289 KHFDMPHDIVASEDGTVYIGDAHTNTVWKFTLTE 322 (329)
T ss_dssp SCCSSEEEEEECTTSEEEEEESSSCCEEEEEEEE
T ss_pred CccCCeeEEEECCCCCEEEEECCCCEEEEEeCCc
Confidence 5666789999999997777777777 99999864
No 178
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.47 E-value=2.6e-11 Score=123.81 Aligned_cols=217 Identities=13% Similarity=0.159 Sum_probs=152.3
Q ss_pred ceeeccCCCcccccccc------CCCcCeEEEEEc-CCCCCCEEEEEeC-CCcEEEEEcCCCceeEEEec-CCCcEEEEE
Q psy7108 28 VKKGDMAARVLKPEVLS------GHEGPVSCIEFS-PVLSSTGMVSASW-DKTVKLWNAVETDTQHETIQ-LLSDALCVA 98 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~------gH~~~V~~l~~s-p~~dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~ 98 (703)
+..|+.+++.+ ..+. +|...+.+++++ + ++.++++... ++.|++|| .+++....+.. +...+.+++
T Consensus 53 i~~~d~~g~~~--~~~~~~~~~~~~~~~p~~i~~~~~--~g~l~v~~~~~~~~i~~~d-~~g~~~~~~~~~~~~~~~~i~ 127 (286)
T 1q7f_A 53 IQIFDKEGRFK--FQFGECGKRDSQLLYPNRVAVVRN--SGDIIVTERSPTHQIQIYN-QYGQFVRKFGATILQHPRGVT 127 (286)
T ss_dssp EEEECTTSCEE--EEECCBSSSTTCBSSEEEEEEETT--TTEEEEEECGGGCEEEEEC-TTSCEEEEECTTTCSCEEEEE
T ss_pred EEEECCCCcEE--EEecccCCCcccccCceEEEEEcC--CCeEEEEcCCCCCEEEEEC-CCCcEEEEecCccCCCceEEE
Confidence 66788778776 5553 355678999994 6 7777777643 78999999 45544443322 345789999
Q ss_pred EecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108 99 YKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYIC 178 (703)
Q Consensus 99 ~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~ 178 (703)
++|+|+.+++...++.|.+||.+ ++.+..+.... +...+..++++|+|+.+++.+.++.|+
T Consensus 128 ~~~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~------------------~~~~p~~i~~~~~g~l~v~~~~~~~i~ 188 (286)
T 1q7f_A 128 VDNKGRIIVVECKVMRVIIFDQN-GNVLHKFGCSK------------------HLEFPNGVVVNDKQEIFISDNRAHCVK 188 (286)
T ss_dssp ECTTSCEEEEETTTTEEEEECTT-SCEEEEEECTT------------------TCSSEEEEEECSSSEEEEEEGGGTEEE
T ss_pred EeCCCCEEEEECCCCEEEEEcCC-CCEEEEeCCCC------------------ccCCcEEEEECCCCCEEEEECCCCEEE
Confidence 99999987777778999999964 55555553211 112578999999999777777889999
Q ss_pred EEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc--cceEE
Q psy7108 179 IYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE--VRVFC 256 (703)
Q Consensus 179 lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~--~~V~~ 256 (703)
+||.. ++.+..+... +....+..++++++|+.+++...++ ..|.+||. +++.+..+..+. ..+.+
T Consensus 189 ~~~~~-g~~~~~~~~~------g~~~~p~~i~~d~~G~l~v~~~~~~-----~~i~~~~~-~g~~~~~~~~~~~~~~~~~ 255 (286)
T 1q7f_A 189 VFNYE-GQYLRQIGGE------GITNYPIGVGINSNGEILIADNHNN-----FNLTIFTQ-DGQLISALESKVKHAQCFD 255 (286)
T ss_dssp EEETT-CCEEEEESCT------TTSCSEEEEEECTTCCEEEEECSSS-----CEEEEECT-TSCEEEEEEESSCCSCEEE
T ss_pred EEcCC-CCEEEEEccC------CccCCCcEEEECCCCCEEEEeCCCC-----EEEEEECC-CCCEEEEEcccCCCCccee
Confidence 99974 5555555322 1123567899999998766654431 27999995 455555554332 34789
Q ss_pred EEEcCCCCEEEEEeCCC-EEEEEcCCC
Q psy7108 257 VKFSPTGQAWVAATTEG-VHIYSLDSG 282 (703)
Q Consensus 257 l~~spdg~~l~s~s~Dg-v~iwd~~~~ 282 (703)
++++|+|+.+++ +.++ |++|+....
T Consensus 256 i~~~~~g~l~vs-~~~~~v~v~~~~~~ 281 (286)
T 1q7f_A 256 VALMDDGSVVLA-SKDYRLYIYRYVQL 281 (286)
T ss_dssp EEEETTTEEEEE-ETTTEEEEEECSCC
T ss_pred EEECCCCcEEEE-CCCCeEEEEEcccc
Confidence 999999987776 5677 999998654
No 179
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=99.46 E-value=9.7e-13 Score=140.70 Aligned_cols=220 Identities=9% Similarity=-0.041 Sum_probs=141.7
Q ss_pred eeeccCCCccccccccCCCcC-eEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEE-----------
Q psy7108 29 KKGDMAARVLKPEVLSGHEGP-VSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALC----------- 96 (703)
Q Consensus 29 ~~~d~tg~~~~~~~l~gH~~~-V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~----------- 96 (703)
..++..+... ..+..+... ..++.|+| ||+.|+.++.++.|.+||+.+++.......+......
T Consensus 63 ~~~d~~~~~~--~~l~~~~~~~~~~~~~sp--dg~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~ 138 (396)
T 3c5m_A 63 YLLNLETQQA--VQLTEGKGDNTFGGFIST--DERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTK 138 (396)
T ss_dssp EEEETTTTEE--EECCCSSCBCTTTCEECT--TSSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSE
T ss_pred EEEECCCCcE--EEeecCCCCccccceECC--CCCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCc
Confidence 3445444333 344444333 34488999 9999999999999999999877543322223332222
Q ss_pred --------EEEecCCCEEEEE-----ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC
Q psy7108 97 --------VAYKPDGTEIVVA-----TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA 163 (703)
Q Consensus 97 --------v~~spdg~~las~-----s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp 163 (703)
++|+|+++.++.+ ..+..|++||+.+++........ ..+..+.|+|
T Consensus 139 ~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~---------------------~~~~~~~~sp 197 (396)
T 3c5m_A 139 LVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDT---------------------AWLGHPIYRP 197 (396)
T ss_dssp EEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEES---------------------SCEEEEEEET
T ss_pred cccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCC---------------------cccccceECC
Confidence 3567777766554 35668999999988766554322 2688999999
Q ss_pred -CCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108 164 -DGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP 236 (703)
Q Consensus 164 -dg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw 236 (703)
+++.|+.++.+ ..|.+||+.+++...... +. ....+..++|+|+|+.+++.+..+ ......|++|
T Consensus 198 ~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~-~~------~~~~~~~~~~spdg~~l~~~~~~~-~~~~~~l~~~ 269 (396)
T 3c5m_A 198 FDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKE-HA------EGESCTHEFWIPDGSAMAYVSYFK-GQTDRVIYKA 269 (396)
T ss_dssp TEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSC-CC------TTEEEEEEEECTTSSCEEEEEEET-TTCCEEEEEE
T ss_pred CCCCEEEEEecCCCCCCCceEEEEECCCCceeEeec-cC------CCccccceEECCCCCEEEEEecCC-CCccceEEEE
Confidence 88877766543 368899987654322111 10 012567789999999877765432 1122359999
Q ss_pred CCCCCccceeecCCccceEEEEEcC-CCCEEEEEe----------------CCC-EEEEEcCCCce
Q psy7108 237 GVKKGDMAARVLKPEVRVFCVKFSP-TGQAWVAAT----------------TEG-VHIYSLDSGYV 284 (703)
Q Consensus 237 d~~~~~~~~~~~~h~~~V~~l~~sp-dg~~l~s~s----------------~Dg-v~iwd~~~~~~ 284 (703)
|+.+++......... .. +.|+| ||+.+++++ .+. |.+|++.+++.
T Consensus 270 d~~~g~~~~l~~~~~--~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~~~~i~~~d~~~~~~ 332 (396)
T 3c5m_A 270 NPETLENEEVMVMPP--CS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIENDPFLYVLNTKAKSA 332 (396)
T ss_dssp CTTTCCEEEEEECCS--EE-EEEECSSSSEEEEEECCC----------CCCCCCEEEEEETTTTBC
T ss_pred ECCCCCeEEeeeCCC--CC-CCccCCCCceEEEecCCcceeeccccccccCCCCcEEEEecccCce
Confidence 998886543322221 22 88999 999887754 234 99999987764
No 180
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.45 E-value=6.5e-12 Score=131.99 Aligned_cols=205 Identities=12% Similarity=0.142 Sum_probs=136.9
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCC---Cc--EEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC----------
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWD---KT--VKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD---------- 112 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~D---g~--V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d---------- 112 (703)
..+.+++|+| ||+.|+.++.+ +. |.+|++.+++ ...+..+.. +.+++|+|||+.|++++.+
T Consensus 59 ~~~~~~~~Sp--Dg~~la~~~~~~~~~~~~l~~~~~~~g~-~~~l~~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~ 134 (347)
T 2gop_A 59 ENATMPRISP--DGKKIAFMRANEEKKVSEIWVADLETLS-SKKILEAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFE 134 (347)
T ss_dssp ESCEEEEECT--TSSEEEEEEEETTTTEEEEEEEETTTTE-EEEEEEESE-EEEEEECTTSSEEEEEEECCCC-------
T ss_pred ccCCCeEECC--CCCEEEEEEeccCCCcceEEEEECCCCc-eEEEEcCCC-ccceeECCCCCEEEEEEccCCCcCCcEEE
Confidence 5688999999 99999988754 33 6777887664 444444444 9999999999999888743
Q ss_pred -----------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC
Q psy7108 113 -----------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK 175 (703)
Q Consensus 113 -----------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg 175 (703)
..|++||+.+++.+..+... .+..++|+||| .+++++.+.
T Consensus 135 ~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~~----------------------~~~~~~~spdg-~~~~~~~~~ 191 (347)
T 2gop_A 135 DDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEKP----------------------RFSSGIWHRDK-IVVNVPHRE 191 (347)
T ss_dssp --CCCC---------CEEEEEEEETTTTEEEEEEEEE----------------------TTCEEEEETTE-EEEEEECCC
T ss_pred cccceeecCcccccCccceEEEEECCCCeEEeeecCC----------------------CcccccCCCCe-EEEEEeccc
Confidence 57999999988764444331 24678999999 777765442
Q ss_pred -------cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCC--CeeEEECCCCCCCcccee
Q psy7108 176 -------YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEG--GNVVLKLPGVKKGDMAAR 246 (703)
Q Consensus 176 -------~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~--~~~~i~iwd~~~~~~~~~ 246 (703)
...+|.+.+++. ..+..+ . .+..+ +|||+.+++.+..+..+ ....|.+|| +++....
T Consensus 192 ~~~~~~~~~~l~~~d~~~~-~~l~~~-~--------~~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l 257 (347)
T 2gop_A 192 IIPQYFKFWDIYIWEDGKE-EKMFEK-V--------SFYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGI 257 (347)
T ss_dssp SSCCSSCCEEEEEEETTEE-EEEEEE-E--------SEEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEES
T ss_pred ccccccccccEEEeCCCce-EEeccC-c--------ceeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEec
Confidence 334443335543 333221 1 23333 99999888776543111 124788888 5655545
Q ss_pred ecCCccceEE-EEEcCCCCEEEEEeCCC-EEEEEcCCCceecc-----eeeeEEEcc
Q psy7108 247 VLKPEVRVFC-VKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP-----FLLDISITP 296 (703)
Q Consensus 247 ~~~h~~~V~~-l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~-----~~~~~~~sp 296 (703)
...+...+.. +.|+ |+ .+++++.++ ++|| +++++.... ...+++++|
T Consensus 258 ~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~ 311 (347)
T 2gop_A 258 LDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE 311 (347)
T ss_dssp STTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS
T ss_pred cccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC
Confidence 5566778886 9999 88 888889888 8999 875543221 124567777
No 181
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.44 E-value=1.4e-11 Score=126.72 Aligned_cols=239 Identities=13% Similarity=0.121 Sum_probs=159.3
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD 112 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d 112 (703)
.+..+ +.+..+.....+++|+| +++ +++++..++.|..|+..++ ......+...+.+++++|+|+++++...+
T Consensus 16 ~~~~~--~~l~~~~~~~eg~~~d~--~g~~l~~~~~~~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~ 89 (296)
T 3e5z_A 16 AGAEA--RRLADGFTWTEGPVYVP--ARSAVIFSDVRQNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGL 89 (296)
T ss_dssp TTCCC--EEEECCCSSEEEEEEEG--GGTEEEEEEGGGTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTT
T ss_pred CCCcE--EEEecCCccccCCeEeC--CCCEEEEEeCCCCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCC
Confidence 34444 66777777889999999 898 7888888999999998776 45555577789999999999988777667
Q ss_pred CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE----e-------------cCC
Q psy7108 113 GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA----G-------------QSK 175 (703)
Q Consensus 113 g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~----s-------------~dg 175 (703)
+.|.+||..+++.......... .....+..++++|+|+++++. + ..+
T Consensus 90 ~~i~~~d~~~g~~~~~~~~~~~----------------~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~ 153 (296)
T 3e5z_A 90 RRLERQREPGGEWESIADSFEG----------------KKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGR 153 (296)
T ss_dssp TEEEEECSTTCCEEEEECEETT----------------EECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSC
T ss_pred CeEEEEcCCCCcEEEEeeccCC----------------CCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCc
Confidence 8999999988876543322111 001245679999999988873 2 124
Q ss_pred cEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-CCcc---ceeecCCc
Q psy7108 176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-KGDM---AARVLKPE 251 (703)
Q Consensus 176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~~---~~~~~~h~ 251 (703)
.|..+|.. ++. ..+... ....+.++|+|+|+.+++.... ..|.+||+. +++. ...+..+.
T Consensus 154 ~l~~~~~~-g~~-~~~~~~--------~~~~~gi~~s~dg~~lv~~~~~------~~i~~~~~~~~g~~~~~~~~~~~~~ 217 (296)
T 3e5z_A 154 WVFRLAPD-GTL-SAPIRD--------RVKPNGLAFLPSGNLLVSDTGD------NATHRYCLNARGETEYQGVHFTVEP 217 (296)
T ss_dssp EEEEECTT-SCE-EEEECC--------CSSEEEEEECTTSCEEEEETTT------TEEEEEEECSSSCEEEEEEEECCSS
T ss_pred EEEEECCC-CCE-EEeecC--------CCCCccEEECCCCCEEEEeCCC------CeEEEEEECCCCcCcCCCeEeeCCC
Confidence 56666655 443 222211 1245789999999988444433 378999876 4443 22222344
Q ss_pred cceEEEEEcCCCCEEEEEeCCCEEEEEcCCCceecce-----eeeEEE-ccchhhhHhhcCCcceEEEE
Q psy7108 252 VRVFCVKFSPTGQAWVAATTEGVHIYSLDSGYVFDPF-----LLDISI-TPQSVKEALADKDYAKALMM 314 (703)
Q Consensus 252 ~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~~~~~~-----~~~~~~-spd~~~~~l~sg~~~~~l~l 314 (703)
..+.+++++++|+.+++. ..+|.+|+.+ ++.+..+ ..+++| +|++ ..|..++.++..++
T Consensus 218 ~~p~~i~~d~~G~l~v~~-~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~--~~L~v~t~~~l~~~ 282 (296)
T 3e5z_A 218 GKTDGLRVDAGGLIWASA-GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEG--RTLYMTVSTEFWSI 282 (296)
T ss_dssp SCCCSEEEBTTSCEEEEE-TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTS--CEEEEEETTEEEEE
T ss_pred CCCCeEEECCCCCEEEEc-CCeEEEECCC-CCEEEEEECCCCceeEEEECCCC--CEEEEEcCCeEEEE
Confidence 557789999999976666 3349999986 5544333 345777 4676 33433344444443
No 182
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.43 E-value=5.3e-11 Score=124.32 Aligned_cols=227 Identities=11% Similarity=0.084 Sum_probs=156.7
Q ss_pred CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC-
Q psy7108 34 AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD- 112 (703)
Q Consensus 34 tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d- 112 (703)
.++.. ..+.++...+.+++|+| ++++++++..++.|.+||..+++.......+...+.+++++|+|+++++...+
T Consensus 33 ~~~~~--~~~~~~~~~~~~~~~~~--~g~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~ 108 (333)
T 2dg1_A 33 TAEPW--LEISKKGLQLEGLNFDR--QGQLFLLDVFEGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDF 108 (333)
T ss_dssp ECEEE--EEEESSCCCEEEEEECT--TSCEEEEETTTCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTS
T ss_pred cccee--EEEeccCccccCcEECC--CCCEEEEECCCCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCC
Confidence 44455 56777777889999999 99988888889999999998775433333566789999999999988777666
Q ss_pred ---CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECC
Q psy7108 113 ---GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSR 183 (703)
Q Consensus 113 ---g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~ 183 (703)
+.|.+||.++++....+.... +...+.+++++|+|+.+++... .+.|..+|..
T Consensus 109 ~~~~~i~~~d~~~~~~~~~~~~~~------------------~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~ 170 (333)
T 2dg1_A 109 KSTGGIFAATENGDNLQDIIEDLS------------------TAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPD 170 (333)
T ss_dssp SSCCEEEEECTTSCSCEEEECSSS------------------SCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTT
T ss_pred CCCceEEEEeCCCCEEEEEEccCc------------------cCCcccceEECCCCCEEEEeccccccCCCceEEEEeCC
Confidence 689999998876543332111 1236899999999988776653 3567777766
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Ccccee--------ecCCccce
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDMAAR--------VLKPEVRV 254 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~~~~--------~~~h~~~V 254 (703)
+++...... . ......++++|+|+.++++.... ..|.+||..+ +..... ..++ ..+
T Consensus 171 ~~~~~~~~~-~--------~~~~~~i~~~~dg~~l~v~~~~~-----~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~ 235 (333)
T 2dg1_A 171 FRTVTPIIQ-N--------ISVANGIALSTDEKVLWVTETTA-----NRLHRIALEDDGVTIQPFGATIPYYFTGH-EGP 235 (333)
T ss_dssp SCCEEEEEE-E--------ESSEEEEEECTTSSEEEEEEGGG-----TEEEEEEECTTSSSEEEEEEEEEEECCSS-SEE
T ss_pred CCEEEEeec-C--------CCcccceEECCCCCEEEEEeCCC-----CeEEEEEecCCCcCcccccceEEEecCCC-CCC
Confidence 554433221 1 12457899999999766654321 3788998863 332211 1112 467
Q ss_pred EEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------------eeeeEEEccch
Q psy7108 255 FCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------------FLLDISITPQS 298 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------------~~~~~~~spd~ 298 (703)
..++++++|+.+++...++ |.+|+.+ ++.+.. ....++|+|++
T Consensus 236 ~~i~~d~~G~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~~~~g~~~~~~~~~~~~dg 291 (333)
T 2dg1_A 236 DSCCIDSDDNLYVAMYGQGRVLVFNKR-GYPIGQILIPGRDEGHMLRSTHPQFIPGT 291 (333)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTT-SCEEEEEECTTGGGTCSCBCCEEEECTTS
T ss_pred CceEECCCCCEEEEEcCCCEEEEECCC-CCEEEEEEcCCCccccccCcceEEECCCC
Confidence 8899999999888777777 9999984 443222 24567888876
No 183
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.39 E-value=7e-11 Score=121.37 Aligned_cols=212 Identities=10% Similarity=0.032 Sum_probs=149.6
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC----CCcEEEEEEecCC
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL----LSDALCVAYKPDG 103 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~----~~~V~~v~~spdg 103 (703)
+..|+..+. . +.+..+...+.+++++| +|.++++...++.|.+||..+++........ ...+.+++++|+|
T Consensus 52 i~~~~~~~~-~--~~~~~~~~~~~~l~~~~--dg~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G 126 (296)
T 3e5z_A 52 TWAWSDDGQ-L--SPEMHPSHHQNGHCLNK--QGHLIACSHGLRRLERQREPGGEWESIADSFEGKKLNSPNDVCLAPDG 126 (296)
T ss_dssp EEEEETTSC-E--EEEESSCSSEEEEEECT--TCCEEEEETTTTEEEEECSTTCCEEEEECEETTEECCCCCCEEECTTS
T ss_pred EEEEECCCC-e--EEEECCCCCcceeeECC--CCcEEEEecCCCeEEEEcCCCCcEEEEeeccCCCCCCCCCCEEECCCC
Confidence 455676665 5 67777888899999999 9998888877889999998777533222111 2345679999999
Q ss_pred CEEEEE----E-------------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC
Q psy7108 104 TEIVVA----T-------------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS 166 (703)
Q Consensus 104 ~~las~----s-------------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~ 166 (703)
+.+++. + ..+.|..++.. ++.. .+.... .....++|+|||+
T Consensus 127 ~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~~~~~--------------------~~~~gi~~s~dg~ 184 (296)
T 3e5z_A 127 SLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLS-APIRDR--------------------VKPNGLAFLPSGN 184 (296)
T ss_dssp CEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEE-EEECCC--------------------SSEEEEEECTTSC
T ss_pred CEEEECCccccccccccccccccCCCcEEEEECCC-CCEE-EeecCC--------------------CCCccEEECCCCC
Confidence 988873 2 13456666655 4432 332222 2568899999999
Q ss_pred EEEEEecCCcEEEEECC-CCce---EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108 167 CILAAGQSKYICIYSSR-EGIL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD 242 (703)
Q Consensus 167 ~l~s~s~dg~I~lwD~~-~~~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~ 242 (703)
.+++.+.++.|.+||+. +++. ...+ .. ....+..++++++|+..++. . ..|.+||.. ++
T Consensus 185 ~lv~~~~~~~i~~~~~~~~g~~~~~~~~~-~~-------~~~~p~~i~~d~~G~l~v~~--~------~~v~~~~~~-g~ 247 (296)
T 3e5z_A 185 LLVSDTGDNATHRYCLNARGETEYQGVHF-TV-------EPGKTDGLRVDAGGLIWASA--G------DGVHVLTPD-GD 247 (296)
T ss_dssp EEEEETTTTEEEEEEECSSSCEEEEEEEE-CC-------SSSCCCSEEEBTTSCEEEEE--T------TEEEEECTT-SC
T ss_pred EEEEeCCCCeEEEEEECCCCcCcCCCeEe-eC-------CCCCCCeEEECCCCCEEEEc--C------CeEEEECCC-CC
Confidence 99777778899999997 5554 2222 11 12355679999999866655 2 269999986 66
Q ss_pred cceeecCCccceEEEEE-cCCCCEEEEEeCCCEEEEEcCCCce
Q psy7108 243 MAARVLKPEVRVFCVKF-SPTGQAWVAATTEGVHIYSLDSGYV 284 (703)
Q Consensus 243 ~~~~~~~h~~~V~~l~~-spdg~~l~s~s~Dgv~iwd~~~~~~ 284 (703)
....+..+.. +.+++| +|+++.|++++.+++..++..+...
T Consensus 248 ~~~~~~~~~~-~~~~~f~~~d~~~L~v~t~~~l~~~~~~~~~~ 289 (296)
T 3e5z_A 248 ELGRVLTPQT-TSNLCFGGPEGRTLYMTVSTEFWSIETNVRGL 289 (296)
T ss_dssp EEEEEECSSC-CCEEEEESTTSCEEEEEETTEEEEEECSCCBC
T ss_pred EEEEEECCCC-ceeEEEECCCCCEEEEEcCCeEEEEEcccccc
Confidence 6667776766 899999 6899999988888777777766543
No 184
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.36 E-value=5e-11 Score=120.33 Aligned_cols=233 Identities=11% Similarity=0.028 Sum_probs=155.5
Q ss_pred CeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108 49 PVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG 127 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~ 127 (703)
...+++++| ++++++ +.+.++.|.+|+..+.............+.+++++++|+.+++.. ++.|.+||.++....
T Consensus 25 ~p~~i~~~~--~g~l~v~~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~-~~~i~~~d~~~~~~~- 100 (270)
T 1rwi_B 25 SPSGVAVDS--AGNVYVTSEGMYGRVVKLATGSTGTTVLPFNGLYQPQGLAVDGAGTVYVTDF-NNRVVTLAAGSNNQT- 100 (270)
T ss_dssp CEEEEEECT--TCCEEEEECSSSCEEEEECC-----EECCCCSCCSCCCEEECTTCCEEEEET-TTEEEEECTTCSCCE-
T ss_pred CccceEECC--CCCEEEEccCCCCcEEEecCCCcccceEeeCCcCCcceeEECCCCCEEEEcC-CCEEEEEeCCCceEe-
Confidence 678999999 898777 547788999998755432211122335678899999999655554 889999998765432
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN 207 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~ 207 (703)
.+.... ...+..++++|+|+.+++...++.|.+||..+....... . .....+.
T Consensus 101 ~~~~~~-------------------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~--~------~~~~~p~ 153 (270)
T 1rwi_B 101 VLPFDG-------------------LNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTVLP--F------TGLNDPD 153 (270)
T ss_dssp ECCCCS-------------------CSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEECC--C------CSCCSCC
T ss_pred eeecCC-------------------cCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEeec--c------ccCCCce
Confidence 221110 125789999999997777777889999986654432211 0 1112567
Q ss_pred eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec
Q psy7108 208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD 286 (703)
Q Consensus 208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~ 286 (703)
.++++++|+.+++.... ..|.+||............+...+.+++++++|..+++...++ |.+|+..+.....
T Consensus 154 ~i~~~~~g~l~v~~~~~------~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~~ 227 (270)
T 1rwi_B 154 GVAVDNSGNVYVTDTDN------NRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTSTV 227 (270)
T ss_dssp CEEECTTCCEEEEEGGG------TEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCEE
T ss_pred eEEEeCCCCEEEEECCC------CEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCCccee
Confidence 89999999866555443 2789999876654333333336688999999997777776666 9999987654321
Q ss_pred ------ceeeeEEEccchhhhHhhcCCcceEEEEEEecCch
Q psy7108 287 ------PFLLDISITPQSVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 287 ------~~~~~~~~spd~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
.....+++++++ .+..+...++.+.+ +++.++
T Consensus 228 ~~~~~~~~p~~i~~~~~g--~l~v~~~~~~~v~~-~~~~~~ 265 (270)
T 1rwi_B 228 LPFTGLNTPLAVAVDSDR--TVYVADRGNDRVVK-LTSLEH 265 (270)
T ss_dssp CCCCSCSCEEEEEECTTC--CEEEEEGGGTEEEE-ECCCGG
T ss_pred eccCCCCCceeEEECCCC--CEEEEECCCCEEEE-EcCCCc
Confidence 123568889988 56666666777776 676654
No 185
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.34 E-value=1.1e-10 Score=122.08 Aligned_cols=218 Identities=13% Similarity=0.136 Sum_probs=153.2
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-----CcEEEEEEec
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLL-----SDALCVAYKP 101 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-----~~V~~v~~sp 101 (703)
+.++| .+++.+ .++.. ......+++++ ++..+++...++.|.+||..+++....+.... .....+++
T Consensus 66 v~viD~~t~~~~--~~i~~-~~~p~~i~~~~--~g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-- 138 (328)
T 3dsm_A 66 IFAIDINTFKEV--GRITG-FTSPRYIHFLS--DEKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-- 138 (328)
T ss_dssp EEEEETTTCCEE--EEEEC-CSSEEEEEEEE--TTEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE--
T ss_pred EEEEECcccEEE--EEcCC-CCCCcEEEEeC--CCeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE--
Confidence 55566 468877 66653 46688999999 88555555588999999998875443333222 15566777
Q ss_pred CCCEEEEEE--CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----
Q psy7108 102 DGTEIVVAT--LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----- 174 (703)
Q Consensus 102 dg~~las~s--~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----- 174 (703)
++..++++. .++.|.++|+.+++....+.... ....++++|+|++++++..+
T Consensus 139 ~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---------------------~p~~i~~~~dG~l~v~~~~~~~~~~ 197 (328)
T 3dsm_A 139 YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---------------------QPTSLVMDKYNKMWTITDGGYEGSP 197 (328)
T ss_dssp ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---------------------CBCCCEECTTSEEEEEBCCBCTTCS
T ss_pred ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---------------------CccceEEcCCCCEEEEECCCccCCc
Confidence 355555555 48899999999998887776432 24568899999977776554
Q ss_pred -----CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--e
Q psy7108 175 -----KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--V 247 (703)
Q Consensus 175 -----g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~ 247 (703)
+.|.++|..+++....+..... .....++++|+++.++++.. .|.+||..+++.... .
T Consensus 198 ~~~~~~~v~~id~~t~~v~~~~~~~~g-------~~p~~la~~~d~~~lyv~~~--------~v~~~d~~t~~~~~~~~~ 262 (328)
T 3dsm_A 198 YGYEAPSLYRIDAETFTVEKQFKFKLG-------DWPSEVQLNGTRDTLYWINN--------DIWRMPVEADRVPVRPFL 262 (328)
T ss_dssp SCBCCCEEEEEETTTTEEEEEEECCTT-------CCCEEEEECTTSCEEEEESS--------SEEEEETTCSSCCSSCSB
T ss_pred cccCCceEEEEECCCCeEEEEEecCCC-------CCceeEEEecCCCEEEEEcc--------EEEEEECCCCceeeeeee
Confidence 7899999999988777654322 25678999999998888654 478899888765321 1
Q ss_pred cCCccceEEEEEcCCCCEE-EEE----eCCC-EEEEEcCCCceeccee
Q psy7108 248 LKPEVRVFCVKFSPTGQAW-VAA----TTEG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 248 ~~h~~~V~~l~~spdg~~l-~s~----s~Dg-v~iwd~~~~~~~~~~~ 289 (703)
........+++++|++..+ ++. ..++ |.+|+.+ ++....+.
T Consensus 263 ~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v~d~~-g~~~~~i~ 309 (328)
T 3dsm_A 263 EFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYRYSPQ-GKLIDEFY 309 (328)
T ss_dssp CCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEEECTT-CCEEEEEE
T ss_pred cCCCCceEEEEEcCCCCeEEEEcccccccCCEEEEECCC-CCEEEEEE
Confidence 1124568899999955444 555 4556 9999998 77665543
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.33 E-value=1.8e-10 Score=117.26 Aligned_cols=193 Identities=15% Similarity=0.096 Sum_probs=151.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCC
Q psy7108 60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLL-SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSG 138 (703)
Q Consensus 60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~ 138 (703)
.++.|++++.|+.|.+||.++++.+.+...+. ..+.+++++|+|+.++ +.++.|..||. +++.+..+.....
T Consensus 4 ~~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~---- 76 (276)
T 3no2_A 4 PQHLLVGGSGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF--SYSKGAKMITR-DGRELWNIAAPAG---- 76 (276)
T ss_dssp CCEEEEECTTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE--ECBSEEEEECT-TSCEEEEEECCTT----
T ss_pred CCcEEEeeCCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE--eCCCCEEEECC-CCCEEEEEcCCCC----
Confidence 47899999999999999998997776666555 4789999999999888 45788999999 8998888876421
Q ss_pred CCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCE
Q psy7108 139 RLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNV 217 (703)
Q Consensus 139 ~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~ 217 (703)
..+.++.+.|||+.+++.+. ++.+..+|. +++.+.++..... ..+.......+++.++|++
T Consensus 77 ---------------~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~--~~~~~~~~~~v~~~~~G~~ 138 (276)
T 3no2_A 77 ---------------CEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETG--IERPHAQFRQINKNKKGNY 138 (276)
T ss_dssp ---------------CEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCS--CSSGGGSCSCCEECTTSCE
T ss_pred ---------------ccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCC--CCcccccccCceECCCCCE
Confidence 15788999999999999887 778888885 6888877765332 1122234556788999999
Q ss_pred EEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCcee
Q psy7108 218 SLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 218 l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~ 285 (703)
+++...++ .|..||.. |+.+.++..+ ..+.++...++|+.+++++.++ |..+|.++|+.+
T Consensus 139 lv~~~~~~------~v~~~d~~-G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~ 199 (276)
T 3no2_A 139 LVPLFATS------EVREIAPN-GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIV 199 (276)
T ss_dssp EEEETTTT------EEEEECTT-SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEE
T ss_pred EEEecCCC------EEEEECCC-CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEE
Confidence 88766543 89999988 8887777654 3456778899999999888887 999999888774
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.30 E-value=1.3e-09 Score=113.66 Aligned_cols=212 Identities=10% Similarity=0.054 Sum_probs=137.1
Q ss_pred ceeeccC-CCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC----CcEEEEEcCCCceeEEEe--cCCCcEEEEEEe
Q psy7108 28 VKKGDMA-ARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD----KTVKLWNAVETDTQHETI--QLLSDALCVAYK 100 (703)
Q Consensus 28 v~~~d~t-g~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D----g~V~iWd~~~~~~~~~~~--~~~~~V~~v~~s 100 (703)
+..||.. ++.. .....+...+.+++++| +|+++++...+ +.|.+||..++....... .....+.+++++
T Consensus 68 i~~~d~~~~~~~--~~~~~~~~~~~~i~~~~--dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d 143 (333)
T 2dg1_A 68 IFKINPETKEIK--RPFVSHKANPAAIKIHK--DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFD 143 (333)
T ss_dssp EEEECTTTCCEE--EEEECSSSSEEEEEECT--TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEEC
T ss_pred EEEEeCCCCcEE--EEeeCCCCCcceEEECC--CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEEC
Confidence 5566754 4443 33335678899999999 99988887766 689999987764332222 244578999999
Q ss_pred cCCCEEEEEEC------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ec
Q psy7108 101 PDGTEIVVATL------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQ 173 (703)
Q Consensus 101 pdg~~las~s~------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~ 173 (703)
|+|+.+++... .+.|..+|.++++....... . ..+..++|+|+|+.++.+ +.
T Consensus 144 ~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~--------------------~~~~~i~~~~dg~~l~v~~~~ 202 (333)
T 2dg1_A 144 SKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQN-I--------------------SVANGIALSTDEKVLWVTETT 202 (333)
T ss_dssp TTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEE-E--------------------SSEEEEEECTTSSEEEEEEGG
T ss_pred CCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecC-C--------------------CcccceEECCCCCEEEEEeCC
Confidence 99987776653 35677777665554332222 1 147889999999866554 56
Q ss_pred CCcEEEEECCC-CceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108 174 SKYICIYSSRE-GILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV 252 (703)
Q Consensus 174 dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~ 252 (703)
++.|.+||+.+ +.....+.........++ ..+..++++++|+..+....+ ..|.+||. +++....+..+..
T Consensus 203 ~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~~i~~d~~G~l~v~~~~~------~~v~~~d~-~g~~~~~~~~~~~ 274 (333)
T 2dg1_A 203 ANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPDSCCIDSDDNLYVAMYGQ------GRVLVFNK-RGYPIGQILIPGR 274 (333)
T ss_dssp GTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEEEEEEBTTCCEEEEEETT------TEEEEECT-TSCEEEEEECTTG
T ss_pred CCeEEEEEecCCCcCcccccceEEEecCCC-CCCCceEECCCCCEEEEEcCC------CEEEEECC-CCCEEEEEEcCCC
Confidence 78999999964 433322211000001111 256779999999876665433 26899998 4555555544433
Q ss_pred ------ceEEEEEcCCCCEEEEEeCC
Q psy7108 253 ------RVFCVKFSPTGQAWVAATTE 272 (703)
Q Consensus 253 ------~V~~l~~spdg~~l~s~s~D 272 (703)
.+.+++|+||++.|+.++.+
T Consensus 275 ~~g~~~~~~~~~~~~dg~~L~v~~~~ 300 (333)
T 2dg1_A 275 DEGHMLRSTHPQFIPGTNQLIICSND 300 (333)
T ss_dssp GGTCSCBCCEEEECTTSCEEEEEEEC
T ss_pred ccccccCcceEEECCCCCEEEEEeCc
Confidence 68899999998777655544
No 188
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=99.29 E-value=1.7e-10 Score=116.36 Aligned_cols=218 Identities=11% Similarity=-0.043 Sum_probs=143.7
Q ss_pred ceeeccCCCccccccc-cCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCE
Q psy7108 28 VKKGDMAARVLKPEVL-SGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTE 105 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l-~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~ 105 (703)
+..++..+... ..+ ..+...+.++++++ +++++++.. ++.|.+||..+... .... .....+.+++++|+|+.
T Consensus 48 i~~~~~~~~~~--~~~~~~~~~~p~~i~~~~--~g~l~v~~~-~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l 121 (270)
T 1rwi_B 48 VVKLATGSTGT--TVLPFNGLYQPQGLAVDG--AGTVYVTDF-NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAV 121 (270)
T ss_dssp EEEECC-------EECCCCSCCSCCCEEECT--TCCEEEEET-TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCE
T ss_pred EEEecCCCccc--ceEeeCCcCCcceeEECC--CCCEEEEcC-CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCE
Confidence 44555444333 222 23445688999999 888777666 88999999865532 2222 23357899999999997
Q ss_pred EEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCC
Q psy7108 106 IVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREG 185 (703)
Q Consensus 106 las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~ 185 (703)
+++...++.|.+|+..+.......... ...+..++++++|+.+++...++.|.+||....
T Consensus 122 ~v~~~~~~~i~~~~~~~~~~~~~~~~~--------------------~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~ 181 (270)
T 1rwi_B 122 YVADRGNNRVVKLAAGSKTQTVLPFTG--------------------LNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN 181 (270)
T ss_dssp EEEEGGGTEEEEECTTCCSCEECCCCS--------------------CCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC
T ss_pred EEEECCCCEEEEEECCCceeEeecccc--------------------CCCceeEEEeCCCCEEEEECCCCEEEEEecCCC
Confidence 777777889999976554432211111 114577999999997777777789999998876
Q ss_pred ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108 186 ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA 265 (703)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~ 265 (703)
....... .....+..++++++|..+++.... ..|.+||............+...+.+++++|+|+.
T Consensus 182 ~~~~~~~--------~~~~~p~~i~~d~~g~l~v~~~~~------~~v~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l 247 (270)
T 1rwi_B 182 NQVVLPF--------TDITAPWGIAVDEAGTVYVTEHNT------NQVVKLLAGSTTSTVLPFTGLNTPLAVAVDSDRTV 247 (270)
T ss_dssp CEEECCC--------SSCCSEEEEEECTTCCEEEEETTT------SCEEEECTTCSCCEECCCCSCSCEEEEEECTTCCE
T ss_pred ceEeecc--------cCCCCceEEEECCCCCEEEEECCC------CcEEEEcCCCCcceeeccCCCCCceeEEECCCCCE
Confidence 5432111 011356789999999665555433 26888988655433222233356899999999997
Q ss_pred EEEEeCCC-EEEEEcCCCcee
Q psy7108 266 WVAATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 266 l~s~s~Dg-v~iwd~~~~~~~ 285 (703)
+++...++ |+++++...+.+
T Consensus 248 ~v~~~~~~~v~~~~~~~~~~~ 268 (270)
T 1rwi_B 248 YVADRGNDRVVKLTSLEHHHH 268 (270)
T ss_dssp EEEEGGGTEEEEECCCGGGSC
T ss_pred EEEECCCCEEEEEcCCCcccc
Confidence 78888788 999998765543
No 189
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=99.29 E-value=5.6e-10 Score=113.66 Aligned_cols=205 Identities=8% Similarity=0.068 Sum_probs=153.3
Q ss_pred ceeecc-CCCccccccccCCC-cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-CCcEEEEEEecCCC
Q psy7108 28 VKKGDM-AARVLKPEVLSGHE-GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-LSDALCVAYKPDGT 104 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~-~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~ 104 (703)
+..||. +|+.+ ..+..+. ..+.++.++| +|++++ +.++.|+.||. +++.+.+.... ...+.++.+.|+|+
T Consensus 17 v~~~d~~tG~~~--w~~~~~~~~~~~~~~~~p--dG~ilv--s~~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~ 89 (276)
T 3no2_A 17 IAIINKDTKEIV--WEYPLEKGWECNSVAATK--AGEILF--SYSKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGN 89 (276)
T ss_dssp EEEEETTTTEEE--EEEECCTTCCCCEEEECT--TSCEEE--ECBSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSC
T ss_pred EEEEECCCCeEE--EEeCCCccCCCcCeEECC--CCCEEE--eCCCCEEEECC-CCCEEEEEcCCCCccccccEECCCCC
Confidence 345565 89988 8887766 5789999999 999998 34678999998 77666666554 35788999999999
Q ss_pred EEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC
Q psy7108 105 EIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR 183 (703)
Q Consensus 105 ~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~ 183 (703)
.+++.+. ++.|..+|. +|+.+..+....... .+......++..++|+++++...++.|..||..
T Consensus 90 ~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~--------------~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 90 ALVAWCGHPSTILEVNM-KGEVLSKTEFETGIE--------------RPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEEEEESTTEEEEEECT-TSCEEEEEEECCSCS--------------SGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred EEEEecCCCCEEEEEeC-CCCEEEEEeccCCCC--------------cccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 9999887 778888886 677777765422100 000123345779999999999999999999988
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc------cceEEE
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE------VRVFCV 257 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~------~~V~~l 257 (703)
|+.+.++.... ...++...++|..++++..+ ..|..+|..+|+.+.++..+. ..+.++
T Consensus 155 -G~~~w~~~~~~---------~~~~~~~~~~g~~~v~~~~~------~~v~~~d~~tG~~~w~~~~~~~~~~~l~~~~~~ 218 (276)
T 3no2_A 155 -GQLLNSVKLSG---------TPFSSAFLDNGDCLVACGDA------HCFVQLNLESNRIVRRVNANDIEGVQLFFVAQL 218 (276)
T ss_dssp -SCEEEEEECSS---------CCCEEEECTTSCEEEECBTT------SEEEEECTTTCCEEEEEEGGGSBSCCCSEEEEE
T ss_pred -CCEEEEEECCC---------CccceeEcCCCCEEEEeCCC------CeEEEEeCcCCcEEEEecCCCCCCccccccccc
Confidence 99888887531 34456778999988776654 279999999998877765332 237888
Q ss_pred EEcCCCCEEEEEe
Q psy7108 258 KFSPTGQAWVAAT 270 (703)
Q Consensus 258 ~~spdg~~l~s~s 270 (703)
+..++|+.+++..
T Consensus 219 ~~~~~G~i~v~~~ 231 (276)
T 3no2_A 219 FPLQNGGLYICNW 231 (276)
T ss_dssp EECTTSCEEEEEE
T ss_pred eEcCCCCEEEEec
Confidence 8999999887774
No 190
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=99.28 E-value=9.1e-10 Score=115.10 Aligned_cols=240 Identities=8% Similarity=0.036 Sum_probs=159.7
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG 127 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~ 127 (703)
....++.+. ++..+++...++.|.+||..+++....+ ........++++++++..++...++.|.+||..+++...
T Consensus 44 ~~~~~i~~~---~~~lyv~~~~~~~v~viD~~t~~~~~~i-~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~ 119 (328)
T 3dsm_A 44 DVAQSMVIR---DGIGWIVVNNSHVIFAIDINTFKEVGRI-TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITG 119 (328)
T ss_dssp SCEEEEEEE---TTEEEEEEGGGTEEEEEETTTCCEEEEE-ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEE
T ss_pred ccceEEEEE---CCEEEEEEcCCCEEEEEECcccEEEEEc-CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEE
Confidence 446778875 4566677777899999999988765555 455678999999998544444378999999999998877
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFTITQNKSLDGINDF 205 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~ 205 (703)
.+...... ........+++ ++..+.+++ .++.|.++|+.+++.+.++.... .
T Consensus 120 ~i~~g~~~---------------~~~~~p~~i~~--~~~~lyv~~~~~~~~v~viD~~t~~~~~~i~~g~---------~ 173 (328)
T 3dsm_A 120 YIECPDMD---------------MESGSTEQMVQ--YGKYVYVNCWSYQNRILKIDTETDKVVDELTIGI---------Q 173 (328)
T ss_dssp EEECTTCC---------------TTTCBCCCEEE--ETTEEEEEECTTCCEEEEEETTTTEEEEEEECSS---------C
T ss_pred EEEcCCcc---------------ccCCCcceEEE--ECCEEEEEcCCCCCEEEEEECCCCeEEEEEEcCC---------C
Confidence 76643210 00012334566 345555554 47899999999998887775321 3
Q ss_pred ceeeeeccCCCEEEEEcccCCCC----CeeEEECCCCCCCccceeecCC-ccceEEEEEcCCCCEEEEEeCCCEEEEEcC
Q psy7108 206 INRRKMTEFGNVSLIETRETHEG----GNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTGQAWVAATTEGVHIYSLD 280 (703)
Q Consensus 206 v~~~~~spdg~~l~~~~~~~~~~----~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~ 280 (703)
...++++|+|+.++++....... ....|.++|..+++....+... ......++++|+++.+.++.. .|.+||..
T Consensus 174 p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g~~p~~la~~~d~~~lyv~~~-~v~~~d~~ 252 (328)
T 3dsm_A 174 PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLGDWPSEVQLNGTRDTLYWINN-DIWRMPVE 252 (328)
T ss_dssp BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTTCCCEEEEECTTSCEEEEESS-SEEEEETT
T ss_pred ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCCCCceeEEEecCCCEEEEEcc-EEEEEECC
Confidence 45788999998666554321000 0147999999888766555432 236889999999999887765 78999998
Q ss_pred CCceec--------ceeeeEEEccchhhhHhhc-C--CcceEEEEEEecC
Q psy7108 281 SGYVFD--------PFLLDISITPQSVKEALAD-K--DYAKALMMSLKLN 319 (703)
Q Consensus 281 ~~~~~~--------~~~~~~~~spd~~~~~l~s-g--~~~~~l~la~~l~ 319 (703)
+++... .....++++|++-..+++. + ...+.+.+ ++.+
T Consensus 253 t~~~~~~~~~~~~~~~p~gi~vdp~~g~lyva~~~~y~~~~~V~v-~d~~ 301 (328)
T 3dsm_A 253 ADRVPVRPFLEFRDTKYYGLTVNPNNGEVYVADAIDYQQQGIVYR-YSPQ 301 (328)
T ss_dssp CSSCCSSCSBCCCSSCEEEEEECTTTCCEEEEECTTSSSEEEEEE-ECTT
T ss_pred CCceeeeeeecCCCCceEEEEEcCCCCeEEEEcccccccCCEEEE-ECCC
Confidence 876531 1235688998542333332 1 33555555 6554
No 191
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.27 E-value=2e-10 Score=133.40 Aligned_cols=239 Identities=10% Similarity=0.044 Sum_probs=154.7
Q ss_pred eEEeeecccCCceEEecC-------Cceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCc--------
Q psy7108 9 LIETRETHEGGNVVLKLP-------GVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKT-------- 72 (703)
Q Consensus 9 ~~~~~~~~~~~~~~i~~~-------~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~-------- 72 (703)
.....+..+|....+... .+.+||. +|+.+ .... ....+.+++|+| ||+.|+.++.++.
T Consensus 127 ~~~~~~SPDg~~la~~~~~~G~~~~~i~v~d~~tg~~~--~~~~-~~~~~~~~~wsp--Dg~~l~~~~~~~~~~~~~~~~ 201 (710)
T 2xdw_A 127 LRGYAFSEDGEYFAYGLSASGSDWVTIKFMKVDGAKEL--PDVL-ERVKFSCMAWTH--DGKGMFYNAYPQQDGKSDGTE 201 (710)
T ss_dssp EEEEEECTTSSEEEEEEEETTCSCEEEEEEETTTTEEE--EEEE-EEECSCCEEECT--TSSEEEEEECCCCSSCCSSSC
T ss_pred EEEEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC--cccc-cCcccceEEEEe--CCCEEEEEEECCccccccccc
Confidence 334445445544444332 3556664 45444 2211 222367899999 9999999988766
Q ss_pred --------EEEEEcCCCcee-EEEec---CCCcEEEEEEecCCCEEEEEEC-----CCeEEEEEcCC------Cc-EEEE
Q psy7108 73 --------VKLWNAVETDTQ-HETIQ---LLSDALCVAYKPDGTEIVVATL-----DGQLIMFDVES------AA-QVGS 128 (703)
Q Consensus 73 --------V~iWd~~~~~~~-~~~~~---~~~~V~~v~~spdg~~las~s~-----dg~I~vwd~~~------~~-~~~~ 128 (703)
|++|++.++... ..+.. +...+..++|+|||++|+.++. +..|++||+.+ +. ....
T Consensus 202 ~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~ 281 (710)
T 2xdw_A 202 TSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVK 281 (710)
T ss_dssp CCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEE
T ss_pred cccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEE
Confidence 999999877532 22222 3455789999999999988765 56899999986 42 3444
Q ss_pred EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----CcEEEEECCCCce--EEEEEeccCCccccc
Q psy7108 129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KYICIYSSREGIL--LKKFTITQNKSLDGI 202 (703)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~I~lwD~~~~~~--~~~~~~~~~~~~~~~ 202 (703)
+..+.. .+.. .|+|+|+.|+..+.. ..|.+||+.++.. .+.+..+..
T Consensus 282 l~~~~~--------------------~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~------ 334 (710)
T 2xdw_A 282 LIDNFE--------------------GEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPEESKWKVLVPEHE------ 334 (710)
T ss_dssp EECSSS--------------------SCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCCGGGCEEEECCCS------
T ss_pred eeCCCC--------------------cEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCCcccceeccCCCC------
Confidence 444332 2333 488999988876543 3599999987642 233332211
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE-EEeC---CC-EEEE
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV-AATT---EG-VHIY 277 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~-s~s~---Dg-v~iw 277 (703)
...+..+++++++..++....+ +...|.+||+.+++....+..+.+.+..++++|+++.++ +.+. .+ +.+|
T Consensus 335 ~~~~~~~~~~~~~~lv~~~~~~----g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~ 410 (710)
T 2xdw_A 335 KDVLEWVACVRSNFLVLCYLHD----VKNTLQLHDLATGALLKIFPLEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHC 410 (710)
T ss_dssp SCEEEEEEEETTTEEEEEEEET----TEEEEEEEETTTCCEEEEECCCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEE
T ss_pred CCeEEEEEEEcCCEEEEEEEEC----CEEEEEEEECCCCCEEEecCCCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEE
Confidence 0256778888666655554433 234688888877876677777778899999999998764 3332 24 8899
Q ss_pred EcCCCc
Q psy7108 278 SLDSGY 283 (703)
Q Consensus 278 d~~~~~ 283 (703)
|+.+++
T Consensus 411 d~~tg~ 416 (710)
T 2xdw_A 411 DLTKEE 416 (710)
T ss_dssp ETTSSS
T ss_pred ECCCCc
Confidence 998876
No 192
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.22 E-value=1.8e-10 Score=121.98 Aligned_cols=172 Identities=12% Similarity=0.106 Sum_probs=128.9
Q ss_pred CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc----------eeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEE
Q psy7108 49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD----------TQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMF 118 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~----------~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vw 118 (703)
+++.+++++ ...++++|+.|+ +++|++++.. .......+.. |+.++| |++.|+++ .++.|++|
T Consensus 39 ~~nlLais~--~~gll~a~~~~~-l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~-~~~~l~v~ 111 (388)
T 1xip_A 39 SLQNLDISN--SKSLFVAASGSK-AVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVS-TRNALYSL 111 (388)
T ss_dssp CCBCEEEET--TTTEEEEEETTE-EEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEE-ESSEEEEE
T ss_pred cccEEEEcC--CCCEEEEeCCCE-EEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEE-cCCcEEEE
Confidence 689999999 899999999985 5669865332 1123345667 999999 89999998 88999999
Q ss_pred EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108 119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
|+++.........+.. .+.++.+.+. .+++++.||.+.+||+.++.....
T Consensus 112 dv~sl~~~~~~~~~~~--------------------~v~~i~~~~p--~~av~~~dG~L~v~dl~~~~~~~~-------- 161 (388)
T 1xip_A 112 DLEELSEFRTVTSFEK--------------------PVFQLKNVNN--TLVILNSVNDLSALDLRTKSTKQL-------- 161 (388)
T ss_dssp ESSSTTCEEEEEECSS--------------------CEEEEEECSS--EEEEEETTSEEEEEETTTCCEEEE--------
T ss_pred EchhhhccCccceeec--------------------ceeeEEecCC--CEEEEECCCCEEEEEccCCccccc--------
Confidence 9988765555554432 5777776654 388889999999999998876431
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceee------c---CCccceEEEEEcCCCCEEE
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARV------L---KPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~------~---~h~~~V~~l~~spdg~~l~ 267 (703)
...|++++|||+| ++++..++ .+++|+...++. ...+ . +|+..|.++.|.+++.+++
T Consensus 162 ----~~~Vs~v~WSpkG--~~vg~~dg------~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~~~flv 229 (388)
T 1xip_A 162 ----AQNVTSFDVTNSQ--LAVLLKDR------SFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSPQDFLA 229 (388)
T ss_dssp ----EESEEEEEECSSE--EEEEETTS------CEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSSSEEEE
T ss_pred ----cCCceEEEEcCCc--eEEEEcCC------cEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecCCeEEE
Confidence 1378999999999 45555543 688887776654 3334 2 3678899999999998886
Q ss_pred EE
Q psy7108 268 AA 269 (703)
Q Consensus 268 s~ 269 (703)
+=
T Consensus 230 ~y 231 (388)
T 1xip_A 230 VF 231 (388)
T ss_dssp EE
T ss_pred EE
Confidence 53
No 193
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=99.21 E-value=7.8e-10 Score=115.95 Aligned_cols=197 Identities=12% Similarity=0.150 Sum_probs=125.7
Q ss_pred eeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---------------------------CcEEEEEcCCCc
Q psy7108 30 KGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---------------------------KTVKLWNAVETD 82 (703)
Q Consensus 30 ~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---------------------------g~V~iWd~~~~~ 82 (703)
.++..+... ..+..+.. +.+++|+| ||+.|+.++.+ ..|.+||+.+++
T Consensus 89 ~~~~~~g~~--~~l~~~~~-~~~~~wsp--dg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~ 163 (347)
T 2gop_A 89 VADLETLSS--KKILEAKN-IRSLEWNE--DSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEE 163 (347)
T ss_dssp EEETTTTEE--EEEEEESE-EEEEEECT--TSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTE
T ss_pred EEECCCCce--EEEEcCCC-ccceeECC--CCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCe
Confidence 445433333 34444445 99999999 99999888642 568899998775
Q ss_pred eeEEEecCCCcEEEEEEecCCCEEEEEECCC-------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCcc
Q psy7108 83 TQHETIQLLSDALCVAYKPDGTEIVVATLDG-------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKA 155 (703)
Q Consensus 83 ~~~~~~~~~~~V~~v~~spdg~~las~s~dg-------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (703)
....+.. . .+..++|+||| .++++..++ ...+|.+++++.. .+..+ . .
T Consensus 164 ~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~-~l~~~-~--------------------~ 218 (347)
T 2gop_A 164 VIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEE-KMFEK-V--------------------S 218 (347)
T ss_dssp EEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEE-EEEEE-E--------------------S
T ss_pred EEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeCCCceE-EeccC-c--------------------c
Confidence 4244433 3 78899999999 777776542 3344444455433 33222 2 3
Q ss_pred EEEEEEcCCCCEEEEEecC--------CcEEEEECCCCceEEEEEeccCCcccccccccee-eeeccCCCEEEEEcccCC
Q psy7108 156 VSTVCYSADGSCILAAGQS--------KYICIYSSREGILLKKFTITQNKSLDGINDFINR-RKMTEFGNVSLIETRETH 226 (703)
Q Consensus 156 V~~i~~spdg~~l~s~s~d--------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~-~~~spdg~~l~~~~~~~~ 226 (703)
+..+ +|||+.|+.++.+ ..|.+|| +++..... ..+...+.. +.|+ +| .++++..++
T Consensus 219 ~~~~--spdg~~l~~~~~~~~~~~~~~~~l~~~d--~~~~~~l~--------~~~~~~~~~~~~~s-dg-~~~~~~~~~- 283 (347)
T 2gop_A 219 FYAV--DSDGERILLYGKPEKKYMSEHNKLYIYD--GKEVMGIL--------DEVDRGVGQAKIKD-GK-VYFTLFEEG- 283 (347)
T ss_dssp EEEE--EECSSCEEEEECCSSSCCCSSCEEEEEC--SSCEEESS--------TTCCSEEEEEEEET-TE-EEEEEEETT-
T ss_pred eeeE--CCCCCEEEEEEccccCCccccceEEEEC--CCceEecc--------ccCCcccCCccEEc-Cc-EEEEEecCC-
Confidence 4444 9999998877644 3688888 45432211 122335665 8899 88 555555442
Q ss_pred CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108 227 EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLD 280 (703)
Q Consensus 227 ~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~ 280 (703)
.+++| +.+++. ..+..+...|.+++|+| ..+++++.++ ..+|.++
T Consensus 284 -----~~~l~-~~~g~~-~~~~~~~~~v~~~~~s~--~~~~~~~~~~~~~~l~~~~ 330 (347)
T 2gop_A 284 -----SVNLY-IWDGEI-KPIAKGRHWIMGFDVDE--IVVYLKETATRLRELFTWD 330 (347)
T ss_dssp -----EEEEE-EESSSE-EEEECSSSEEEEEEESS--SEEEEEECSSSCCEEEEES
T ss_pred -----cEEEE-EcCCce-EEEecCCCeEEeeeeeC--cEEEEEcCCCChHHheEeC
Confidence 67777 765554 34445577899999999 6777777666 4788876
No 194
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.18 E-value=3e-09 Score=109.62 Aligned_cols=237 Identities=10% Similarity=0.054 Sum_probs=150.9
Q ss_pred CCCcCeEEEEEcCCCCCCEEEE-------EeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEecC-CCEEEEEEC
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVS-------ASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKPD-GTEIVVATL 111 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~s-------gs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~spd-g~~las~s~ 111 (703)
..-....+++|++ ++.++++ +..++.|.+||..+++.. .... +...+.+++++++ |+.++ ++.
T Consensus 15 ~~~~~~~~~~~~~--~g~l~~~~~~~~~~~~~~~~i~~~d~~~g~~~-~~~~~~~~~~~~~~~~i~~~~~~g~l~v-~~~ 90 (314)
T 1pjx_A 15 EDIPGAEGPVFDK--NGDFYIVAPEVEVNGKPAGEILRIDLKTGKKT-VICKPEVNGYGGIPAGCQCDRDANQLFV-ADM 90 (314)
T ss_dssp CCCTTCEEEEECT--TSCEEEEETTCEETTEECCEEEEECTTTCCEE-EEECCEETTEECCEEEEEECSSSSEEEE-EET
T ss_pred ccCCCccCceECC--CCCEEEEEeccccCCCCCCEEEEEeCCCCcEE-EEEecccCCCCCCCceEEEecCCCcEEE-EEC
Confidence 3344568999999 8988888 577889999998776532 2222 4467899999999 65444 444
Q ss_pred CCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---------------C
Q psy7108 112 DGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---------------K 175 (703)
Q Consensus 112 dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---------------g 175 (703)
++.|.+||.+ ++.... ...... .....+.+++++++|+.+++...+ +
T Consensus 91 ~~~l~~~d~~-g~~~~~~~~~~~~----------------~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~ 153 (314)
T 1pjx_A 91 RLGLLVVQTD-GTFEEIAKKDSEG----------------RRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFG 153 (314)
T ss_dssp TTEEEEEETT-SCEEECCSBCTTS----------------CBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCE
T ss_pred CCCEEEEeCC-CCEEEEEeccCCC----------------ccccCCcCEEECCCCCEEEEecCcccccccccccccCCCC
Confidence 5589999988 664322 111100 012257889999999988776655 5
Q ss_pred cEEEEECCCCceEEEEEeccCCccccccccceeeeec----cCCCEEEEEcccCCCCCeeEEECCCCC-CCc-----cce
Q psy7108 176 YICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT----EFGNVSLIETRETHEGGNVVLKLPGVK-KGD-----MAA 245 (703)
Q Consensus 176 ~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s----pdg~~l~~~~~~~~~~~~~~i~iwd~~-~~~-----~~~ 245 (703)
.|..||.. ++...... .. .....++++ |+|+.++++...+ ..|.+||.. +++ ...
T Consensus 154 ~l~~~~~~-g~~~~~~~-~~--------~~~~~i~~~~~~d~dg~~l~v~~~~~-----~~i~~~~~~~~g~~~~~~~~~ 218 (314)
T 1pjx_A 154 SIYCFTTD-GQMIQVDT-AF--------QFPNGIAVRHMNDGRPYQLIVAETPT-----KKLWSYDIKGPAKIENKKVWG 218 (314)
T ss_dssp EEEEECTT-SCEEEEEE-EE--------SSEEEEEEEECTTSCEEEEEEEETTT-----TEEEEEEEEETTEEEEEEEEE
T ss_pred eEEEECCC-CCEEEecc-CC--------CCcceEEEecccCCCCCEEEEEECCC-----CeEEEEECCCCCccccceEEE
Confidence 67778766 54433222 11 134678899 9997666654321 368888875 343 122
Q ss_pred eecCCc-cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecc------eeeeEEEccchhhhHhhcCCcceEEEEEEe
Q psy7108 246 RVLKPE-VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDP------FLLDISITPQSVKEALADKDYAKALMMSLK 317 (703)
Q Consensus 246 ~~~~h~-~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~------~~~~~~~spd~~~~~l~sg~~~~~l~la~~ 317 (703)
.+..+. ..+..++++++|+.+++...++ |.+|+.++++.... ...+++++|++.. +..+...++.+.. ++
T Consensus 219 ~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~-l~v~~~~~~~l~~-~~ 296 (314)
T 1pjx_A 219 HIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKT-IFVTEHENNAVWK-FE 296 (314)
T ss_dssp ECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSE-EEEEETTTTEEEE-EE
T ss_pred ECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCE-EEEEeCCCCeEEE-Ee
Confidence 223333 5678899999999888776666 99999886654322 2356888898822 3333333344444 55
Q ss_pred cC
Q psy7108 318 LN 319 (703)
Q Consensus 318 l~ 319 (703)
+.
T Consensus 297 ~~ 298 (314)
T 1pjx_A 297 WQ 298 (314)
T ss_dssp CS
T ss_pred CC
Confidence 44
No 195
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.18 E-value=3.7e-09 Score=118.46 Aligned_cols=201 Identities=9% Similarity=0.025 Sum_probs=143.9
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcC--CCcEEEEEeccccCCC
Q psy7108 60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVE--SAAQVGSVEARRDLDS 137 (703)
Q Consensus 60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~--~~~~~~~~~~~~~~~~ 137 (703)
.+.++++...+++|.++|..+++.+..+ .....+..+.|+|||+++++++.|+.|.+||+. +++.+..+....
T Consensus 166 ~~~~~V~~~~~~~V~viD~~t~~v~~~i-~~g~~p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G~---- 240 (567)
T 1qks_A 166 ENLFSVTLRDAGQIALIDGSTYEIKTVL-DTGYAVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIGS---- 240 (567)
T ss_dssp GGEEEEEETTTTEEEEEETTTCCEEEEE-ECSSCEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECCS----
T ss_pred CceEEEEeCCCCeEEEEECCCCeEEEEE-eCCCCccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecCC----
Confidence 4567777888999999999888655444 455567899999999999999999999999996 788777776533
Q ss_pred CCCCCccchhhcccCCccEEEEEEc----CCCCEEEEEec-CCcEEEEECCCCceEEEEEeccCC--cccccc-ccceee
Q psy7108 138 GRLDTDLVTREQSLKAKAVSTVCYS----ADGSCILAAGQ-SKYICIYSSREGILLKKFTITQNK--SLDGIN-DFINRR 209 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~V~~i~~s----pdg~~l~s~s~-dg~I~lwD~~~~~~~~~~~~~~~~--~~~~~~-~~v~~~ 209 (703)
....++|+ |||+++++++. ++++.++|..+.+.++++...... ....+. ..+..+
T Consensus 241 -----------------~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i 303 (567)
T 1qks_A 241 -----------------EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAI 303 (567)
T ss_dssp -----------------EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEE
T ss_pred -----------------CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEE
Confidence 35789999 69999888764 588999999999998877643210 000111 156678
Q ss_pred eeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCCCceec
Q psy7108 210 KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDSGYVFD 286 (703)
Q Consensus 210 ~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~~~~~ 286 (703)
..++++..+++...+. ..|.++|....+.... .........++.|+|||++++++... + |.++|+.+++...
T Consensus 304 ~~s~~~~~~vv~~~~~-----g~v~~vd~~~~~~~~v~~i~~~~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 304 LASHYRPEFIVNVKET-----GKILLVDYTDLNNLKTTEISAERFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EECSSSSEEEEEETTT-----TEEEEEETTCSSEEEEEEEECCSSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred EEcCCCCEEEEEecCC-----CeEEEEecCCCccceeeeeeccccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 8888887766655432 3677777665432111 11223346688999999998776643 3 9999999987654
Q ss_pred c
Q psy7108 287 P 287 (703)
Q Consensus 287 ~ 287 (703)
.
T Consensus 379 ~ 379 (567)
T 1qks_A 379 I 379 (567)
T ss_dssp E
T ss_pred E
Confidence 3
No 196
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=99.15 E-value=2e-08 Score=112.56 Aligned_cols=225 Identities=16% Similarity=0.092 Sum_probs=151.9
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcC--CCceeEEEecCCCcEEEEEEe----
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAV--ETDTQHETIQLLSDALCVAYK---- 100 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~--~~~~~~~~~~~~~~V~~v~~s---- 100 (703)
+.++| .+++.+ .++... ..+..+.|+| ||+++++++.|+.|.+||+. +.+....+ ........++|+
T Consensus 179 V~viD~~t~~v~--~~i~~g-~~p~~v~~Sp--DGr~lyv~~~dg~V~viD~~~~t~~~v~~i-~~G~~P~~ia~s~~~~ 252 (567)
T 1qks_A 179 IALIDGSTYEIK--TVLDTG-YAVHISRLSA--SGRYLFVIGRDGKVNMIDLWMKEPTTVAEI-KIGSEARSIETSKMEG 252 (567)
T ss_dssp EEEEETTTCCEE--EEEECS-SCEEEEEECT--TSCEEEEEETTSEEEEEETTSSSCCEEEEE-ECCSEEEEEEECCSTT
T ss_pred EEEEECCCCeEE--EEEeCC-CCccceEECC--CCCEEEEEcCCCeEEEEECCCCCCcEeEEE-ecCCCCceeEEccccC
Confidence 44455 466776 666533 3567999999 99999999999999999995 66544443 344567899999
Q ss_pred cCCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccC-CccEEEEEEcCCCCEEEE-EecCCcE
Q psy7108 101 PDGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLK-AKAVSTVCYSADGSCILA-AGQSKYI 177 (703)
Q Consensus 101 pdg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~V~~i~~spdg~~l~s-~s~dg~I 177 (703)
|||+++++++. +++|.++|..+.+.+..+........ ....| ...+..+..++++..++. ...+|.|
T Consensus 253 pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~----------~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v 322 (567)
T 1qks_A 253 WEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYD----------EQEYHPEPRVAAILASHYRPEFIVNVKETGKI 322 (567)
T ss_dssp CTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTT----------TCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred CCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccc----------cccccCCCceEEEEEcCCCCEEEEEecCCCeE
Confidence 69998887765 58999999999999887764211000 00001 115778888988765554 4566899
Q ss_pred EEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-----Ccc
Q psy7108 178 CIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-----PEV 252 (703)
Q Consensus 178 ~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-----h~~ 252 (703)
.++|..+.+.......... .....+.|+|+|+++++++... ..|.++|..+++....+.- |.+
T Consensus 323 ~~vd~~~~~~~~v~~i~~~-------~~~~d~~~~pdgr~~~va~~~s-----n~V~ViD~~t~kl~~~i~vgg~~Phpg 390 (567)
T 1qks_A 323 LLVDYTDLNNLKTTEISAE-------RFLHDGGLDGSHRYFITAANAR-----NKLVVIDTKEGKLVAIEDTGGQTPHPG 390 (567)
T ss_dssp EEEETTCSSEEEEEEEECC-------SSEEEEEECTTSCEEEEEEGGG-----TEEEEEETTTTEEEEEEECSSSSBCCT
T ss_pred EEEecCCCccceeeeeecc-------ccccCceECCCCCEEEEEeCCC-----CeEEEEECCCCcEEEEEeccCcCCCCc
Confidence 9999987654433322221 2455788999999988877543 3789999999876655443 322
Q ss_pred ceEEEEEcCCCCEE-EEEe-CCC-EEEEEcCC
Q psy7108 253 RVFCVKFSPTGQAW-VAAT-TEG-VHIYSLDS 281 (703)
Q Consensus 253 ~V~~l~~spdg~~l-~s~s-~Dg-v~iwd~~~ 281 (703)
.-..+ ++|++..+ +++. .++ |.+++.++
T Consensus 391 ~g~~~-~~p~~g~v~~t~~~g~~~Vsvid~~~ 421 (567)
T 1qks_A 391 RGANF-VHPTFGPVWATSHMGDDSVALIGTDP 421 (567)
T ss_dssp TCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred cceee-ECCCCCcEEEeCCCCCCeEEEecCCC
Confidence 22122 58885554 5553 345 99999987
No 197
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.15 E-value=1.4e-08 Score=104.25 Aligned_cols=219 Identities=13% Similarity=0.086 Sum_probs=140.7
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCc
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAA 124 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~ 124 (703)
.+..---+..|+|. ++.++++...++.|..||..++.. ........+.+++++|+|+++++ . ++.|.+||.++++
T Consensus 10 ~~~~~~Egp~w~~~-~~~l~~~d~~~~~i~~~d~~~~~~--~~~~~~~~~~~i~~~~dG~l~v~-~-~~~l~~~d~~~g~ 84 (297)
T 3g4e_A 10 ENCRCGESPVWEEV-SNSLLFVDIPAKKVCRWDSFTKQV--QRVTMDAPVSSVALRQSGGYVAT-I-GTKFCALNWKEQS 84 (297)
T ss_dssp CCCSBEEEEEEETT-TTEEEEEETTTTEEEEEETTTCCE--EEEECSSCEEEEEEBTTSSEEEE-E-TTEEEEEETTTTE
T ss_pred cCCccccCCeEECC-CCEEEEEECCCCEEEEEECCCCcE--EEEeCCCceEEEEECCCCCEEEE-E-CCeEEEEECCCCc
Confidence 33445568899992 345566666788999999887643 33456678999999999995544 3 6789999998876
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC---------CcEEEEECCC-CceEEEEEec
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS---------KYICIYSSRE-GILLKKFTIT 194 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d---------g~I~lwD~~~-~~~~~~~~~~ 194 (703)
.......... .....+..++++|+|+++++...+ ..-.+|.+.. ++...... .
T Consensus 85 ~~~~~~~~~~----------------~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~-~ 147 (297)
T 3g4e_A 85 AVVLATVDND----------------KKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFD-Q 147 (297)
T ss_dssp EEEEEECCTT----------------CSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEE-E
T ss_pred EEEEEecCCC----------------CCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEee-c
Confidence 5433322111 012257899999999977654321 2234444432 33322221 1
Q ss_pred cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC--CCCccc-----eeecCCccceEEEEEcCCCCEEE
Q psy7108 195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV--KKGDMA-----ARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~--~~~~~~-----~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
....+.++|+|+++.++++.... ..|..||+ .++... ..+..+...+..++++++|+..+
T Consensus 148 --------~~~pngi~~spdg~~lyv~~~~~-----~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwv 214 (297)
T 3g4e_A 148 --------VDISNGLDWSLDHKIFYYIDSLS-----YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWV 214 (297)
T ss_dssp --------ESBEEEEEECTTSCEEEEEEGGG-----TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEE
T ss_pred --------cccccceEEcCCCCEEEEecCCC-----CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEE
Confidence 12457899999999776655432 36888875 455421 11222345678999999998777
Q ss_pred EEeCCC-EEEEEcCCCceecce------eeeEEEc-cch
Q psy7108 268 AATTEG-VHIYSLDSGYVFDPF------LLDISIT-PQS 298 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~~~~~------~~~~~~s-pd~ 298 (703)
+....+ |.+|+.++++....+ ..+++|. |++
T Consensus 215 a~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~ 253 (297)
T 3g4e_A 215 ACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNY 253 (297)
T ss_dssp EEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGG
T ss_pred EEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCC
Confidence 777666 999999888765433 3557776 655
No 198
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.15 E-value=6.2e-08 Score=98.62 Aligned_cols=227 Identities=10% Similarity=0.066 Sum_probs=151.5
Q ss_pred ecccCCceEEecCC--ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--c
Q psy7108 14 ETHEGGNVVLKLPG--VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--Q 89 (703)
Q Consensus 14 ~~~~~~~~~i~~~~--v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~ 89 (703)
+...|..++....+ +..++..++.. ...+..+...+.++++++ ++.++++...++.|..|+.. +. ..... .
T Consensus 22 ~d~~g~l~v~~~~~~~v~~~d~~~~~~-~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~i~~~~~~-g~-~~~~~~~~ 96 (299)
T 2z2n_A 22 VSDKGKVWITQHKANMISCINLDGKIT-EYPLPTPDAKVMCLTISS--DGEVWFTENAANKIGRITKK-GI-IKEYTLPN 96 (299)
T ss_dssp ECTTSCEEEEETTTTEEEEECTTCCEE-EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SC-EEEEECSS
T ss_pred ECCCCCEEEEecCCCcEEEEcCCCCeE-EecCCcccCceeeEEECC--CCCEEEeCCCCCeEEEECCC-Cc-EEEEeCCC
Confidence 34455545444322 66677665443 011223557899999999 99988887778889999975 32 22222 2
Q ss_pred CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEE
Q psy7108 90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCIL 169 (703)
Q Consensus 90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~ 169 (703)
....+.+++++++|+.+++...++.|..||. +++.... .... ....+..++++++|+..+
T Consensus 97 ~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~~~-~~~~------------------~~~~~~~i~~~~~g~l~v 156 (299)
T 2z2n_A 97 PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIREY-ELPN------------------KGSYPSFITLGSDNALWF 156 (299)
T ss_dssp TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEEEE-ECSS------------------TTCCEEEEEECTTSCEEE
T ss_pred cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEEEe-cCCC------------------CCCCCceEEEcCCCCEEE
Confidence 4557899999999988877777889999998 5554322 1110 122688999999998887
Q ss_pred EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ec
Q psy7108 170 AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VL 248 (703)
Q Consensus 170 s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~ 248 (703)
+...++.|..||. +++... +.... ....+..++++++|+..+..... ..|..||. +++.... ..
T Consensus 157 ~~~~~~~i~~~~~-~g~~~~-~~~~~------~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~ 221 (299)
T 2z2n_A 157 TENQNNAIGRITE-SGDITE-FKIPT------PASGPVGITKGNDDALWFVEIIG------NKIGRITT-SGEITEFKIP 221 (299)
T ss_dssp EETTTTEEEEECT-TCCEEE-EECSS------TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECS
T ss_pred EeCCCCEEEEEcC-CCcEEE-eeCCC------CCCcceeEEECCCCCEEEEccCC------ceEEEECC-CCcEEEEECC
Confidence 7777789999998 665443 22111 12356789999999866654433 26888888 6653322 22
Q ss_pred CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcC
Q psy7108 249 KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLD 280 (703)
Q Consensus 249 ~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~ 280 (703)
.+...+.+++++++|+.+++...++ |.+|+..
T Consensus 222 ~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~~ 254 (299)
T 2z2n_A 222 TPNARPHAITAGAGIDLWFTEWGANKIGRLTSN 254 (299)
T ss_dssp STTCCEEEEEECSTTCEEEEETTTTEEEEEETT
T ss_pred CCCCCceeEEECCCCCEEEeccCCceEEEECCC
Confidence 3456789999999999766665555 9999983
No 199
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=99.14 E-value=2e-08 Score=102.31 Aligned_cols=230 Identities=9% Similarity=0.065 Sum_probs=154.5
Q ss_pred ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe--cCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI--QLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~--~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+..+...+.++++++ +|.++++...++.|.+||.. +. ..... .....+.+++++++|..+++...++.|..||.
T Consensus 10 ~~~~~~~~~~i~~d~--~g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 85 (299)
T 2z2n_A 10 LTNQDTGPYGITVSD--KGKVWITQHKANMISCINLD-GK-ITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITK 85 (299)
T ss_dssp CCSSSCCEEEEEECT--TSCEEEEETTTTEEEEECTT-CC-EEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred CCCcCCCccceEECC--CCCEEEEecCCCcEEEEcCC-CC-eEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECC
Confidence 345567899999999 99988877778899999987 43 33322 24567999999999998777766889999998
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
+ ++. ..+.... ....+..++++++|+.+++...++.|..||. +++.. .+....
T Consensus 86 ~-g~~-~~~~~~~------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~----- 138 (299)
T 2z2n_A 86 K-GII-KEYTLPN------------------PDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPN----- 138 (299)
T ss_dssp T-SCE-EEEECSS------------------TTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSS-----
T ss_pred C-CcE-EEEeCCC------------------cCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCC-----
Confidence 6 432 2232110 1226889999999988887777889999998 55443 222111
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYS 278 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd 278 (703)
....+..++++++|+..++.... ..|..+|. +++.... .......+.+++++++|+.+++...++ |.+|+
T Consensus 139 -~~~~~~~i~~~~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~ 210 (299)
T 2z2n_A 139 -KGSYPSFITLGSDNALWFTENQN------NAIGRITE-SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRIT 210 (299)
T ss_dssp -TTCCEEEEEECTTSCEEEEETTT------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEEC
T ss_pred -CCCCCceEEEcCCCCEEEEeCCC------CEEEEEcC-CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEEC
Confidence 12357889999999876665433 26888888 6654332 223445688999999998777666566 99999
Q ss_pred cCCCceec-------ceeeeEEEccchhhhHhhcCCcceEEEE
Q psy7108 279 LDSGYVFD-------PFLLDISITPQSVKEALADKDYAKALMM 314 (703)
Q Consensus 279 ~~~~~~~~-------~~~~~~~~spd~~~~~l~sg~~~~~l~l 314 (703)
. +++... .....+++++++ .+..+....+.+..
T Consensus 211 ~-~g~~~~~~~~~~~~~~~~i~~~~~g--~l~v~~~~~~~i~~ 250 (299)
T 2z2n_A 211 T-SGEITEFKIPTPNARPHAITAGAGI--DLWFTEWGANKIGR 250 (299)
T ss_dssp T-TCCEEEEECSSTTCCEEEEEECSTT--CEEEEETTTTEEEE
T ss_pred C-CCcEEEEECCCCCCCceeEEECCCC--CEEEeccCCceEEE
Confidence 8 555321 113457788887 44333323344443
No 200
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=99.13 E-value=1.9e-08 Score=106.98 Aligned_cols=226 Identities=11% Similarity=0.017 Sum_probs=141.2
Q ss_pred eeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC-------
Q psy7108 29 KKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL------- 90 (703)
Q Consensus 29 ~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~------- 90 (703)
..+| .+++.+ ..+.....+ .++++| ||++++.+. .++.|.+||..+.+....+...
T Consensus 50 ~v~D~~t~~~~--~~i~~g~~p--~i~~sp--Dg~~lyv~n~~~~~~~rg~~~~~v~viD~~t~~~~~~i~~~~~~~~~~ 123 (373)
T 2mad_H 50 WVLDAGSGSIL--GHVNGGFLP--NPVAAH--SGSEFALASTSFSRIAKGKRTDYVEVFDPVTFLPIADIELPDAPRFDV 123 (373)
T ss_pred EEEECCCCeEE--EEecCCCCC--CeEECC--CCCEEEEEeccccccccCCCCCeEEEEECCCCcEEEEEECCCcccccc
Confidence 4455 367766 666544444 899999 999998885 3678999999877654443221
Q ss_pred CCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEE-EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC-C
Q psy7108 91 LSDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGS-VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG-S 166 (703)
Q Consensus 91 ~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg-~ 166 (703)
......++|+|||++|+++.. ++.|.++| .+++.+.. +.... ++.+.|++ +
T Consensus 124 g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~------------------------~~~~~~~~~~ 178 (373)
T 2mad_H 124 GPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPT------------------------CYHIHPGAPS 178 (373)
T ss_pred CCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCc------------------------eEEEEeCCCc
Confidence 133568999999999998874 47899999 99988776 54321 12223332 2
Q ss_pred EEEEEecCCcEEEEECCCCceEEE--------------------------------------------------EEeccC
Q psy7108 167 CILAAGQSKYICIYSSREGILLKK--------------------------------------------------FTITQN 196 (703)
Q Consensus 167 ~l~s~s~dg~I~lwD~~~~~~~~~--------------------------------------------------~~~~~~ 196 (703)
.+++.+.||.+.++|. +++.... +.....
T Consensus 179 ~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~v~~~~~~~~~ 257 (373)
T 2mad_H 179 TFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGATNKAPIDALSG 257 (373)
T ss_pred eEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcceEeeeeeecCC
Confidence 2333344455555554 3333211 100000
Q ss_pred Cc-ccc-ccccceeeeeccCCCEEEEEcccCCC----CCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC-EEEEE
Q psy7108 197 KS-LDG-INDFINRRKMTEFGNVSLIETRETHE----GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ-AWVAA 269 (703)
Q Consensus 197 ~~-~~~-~~~~v~~~~~spdg~~l~~~~~~~~~----~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~-~l~s~ 269 (703)
.. ..+ .......+.++|+++.+++....+.. .....|.+.|..+++.+.++.. .....+++|+|||+ .++++
T Consensus 258 ~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 258 GRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISL-GHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred cccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEEC-CCCcCeEEECCCCCeEEEEE
Confidence 00 000 00112236788998888876543211 1124799999999988777753 23588999999999 67776
Q ss_pred e-CCC-EEEEEcCCCceecc
Q psy7108 270 T-TEG-VHIYSLDSGYVFDP 287 (703)
Q Consensus 270 s-~Dg-v~iwd~~~~~~~~~ 287 (703)
. .++ |.++|..+++....
T Consensus 337 ~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 337 SAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred cCCCCeEEEEECCCCCEEee
Confidence 6 366 99999999887654
No 201
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=99.10 E-value=4.3e-11 Score=139.64 Aligned_cols=201 Identities=13% Similarity=0.066 Sum_probs=114.6
Q ss_pred CCCc-CeEEEEEc-CCCCCCEEEEEeC-CC----cEEEEEcCCC-ceeEEEecCCCcEEEEEEecCCCEEEEEECC----
Q psy7108 45 GHEG-PVSCIEFS-PVLSSTGMVSASW-DK----TVKLWNAVET-DTQHETIQLLSDALCVAYKPDGTEIVVATLD---- 112 (703)
Q Consensus 45 gH~~-~V~~l~~s-p~~dg~~L~sgs~-Dg----~V~iWd~~~~-~~~~~~~~~~~~V~~v~~spdg~~las~s~d---- 112 (703)
+|.- .+...+|| | ||++||.+.. +| +|+++|+.++ +.+..... ....+++|+|||+.|+....|
T Consensus 170 ~~~~~~~~~~~~S~P--DG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~--~~~~~~~WspDg~~l~y~~~d~~~~ 245 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPP--EHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVS--GTNGEIVWGPDHTSLFYVTKDETLR 245 (751)
T ss_dssp TCSCCEEEEEEECTT--TTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEE--EECSCCEECSSTTEEEEEEECTTCC
T ss_pred CCCeEEEeeeEecCC--CCCEEEEEEeCCCCceEEEEEEECCCCCEeCCcccc--CceeeEEEecCCCEEEEEEECCCCC
Confidence 4443 68889999 9 9998886533 33 4999999887 52211111 112468899999988887765
Q ss_pred -CeEEEEEcCCCcE--EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---CCcEEEEECCCCc
Q psy7108 113 -GQLIMFDVESAAQ--VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---SKYICIYSSREGI 186 (703)
Q Consensus 113 -g~I~vwd~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---dg~I~lwD~~~~~ 186 (703)
..|+.+++.+++. ...+.... ......+.|+|||++|+..+. ...|.++|+.++.
T Consensus 246 ~~~v~~~~lgt~~~~~~lv~~~~~-------------------~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~ 306 (751)
T 2xe4_A 246 ENKVWRHVMGKLQSEDVCLYEEHN-------------------PLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN 306 (751)
T ss_dssp EEEEEEEETTSCGGGCEEEEECCC-------------------TTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT
T ss_pred CCEEEEEECCCCchhcEEEEecCC-------------------CceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC
Confidence 2588888877642 22332211 114567899999999887653 3458889988752
Q ss_pred -eE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCcc--ceEEEEEc
Q psy7108 187 -LL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEV--RVFCVKFS 260 (703)
Q Consensus 187 -~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~--~V~~l~~s 260 (703)
.. +.+.. .......++.|+. |+.+++.+..+ ..+...|..+|+.++..... +..+.. .+.++.+.
T Consensus 307 ~~~~~~~l~~-------~~~~~~~s~~~~~-g~~l~~~t~~~-~a~~~~L~~~d~~~~~~~~~~li~~~~~~~l~~~~~~ 377 (751)
T 2xe4_A 307 AHNTLEIVRP-------REKGVRYDVQMHG-TSHLVILTNEG-GAVNHKLLIAPRGQPSDWSHVLVDHSEDVFMESIAVR 377 (751)
T ss_dssp TCCCEEESSC-------CCTTCCEEEEEET-TTEEEEEECTT-TCTTCEEEEEETTSTTCCCCEEECCCSSEEEEEEEEC
T ss_pred CCceeEEeec-------CCCCceEEEeeee-CCEEEEEeCCC-CCCCcEEEEEcCCCcccceeeEECCCCCcEEEEEEEE
Confidence 11 22211 0111223333332 66655554432 12334677777765322222 333333 45555554
Q ss_pred CCCCEE-EEEeCCC---EEEEEc
Q psy7108 261 PTGQAW-VAATTEG---VHIYSL 279 (703)
Q Consensus 261 pdg~~l-~s~s~Dg---v~iwd~ 279 (703)
++.| ++...++ +.++++
T Consensus 378 --~~~lv~~~~~~g~~~l~~~dl 398 (751)
T 2xe4_A 378 --SNYLVVAGRRAGLTRIWTMMA 398 (751)
T ss_dssp --SSEEEEEEEETTEEEEEEEEC
T ss_pred --CCEEEEEEEeCCEEEEEEEec
Confidence 4555 6666677 556665
No 202
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.10 E-value=1.4e-08 Score=109.54 Aligned_cols=208 Identities=8% Similarity=-0.014 Sum_probs=134.1
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC--eEEEEEcCCCcE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG--QLIMFDVESAAQ 125 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg--~I~vwd~~~~~~ 125 (703)
.....++|+| +++++++...++.|++||..++. +..+........ ++|+|+++.|+++..++ .|.+++..++..
T Consensus 131 ~~P~~la~d~--~g~lyv~d~~~~~I~~id~~~g~-~~~~~~~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~~~~~~ 206 (409)
T 3hrp_A 131 KYMWGIAAVG--NNTVLAYQRDDPRVRLISVDDNK-VTTVHPGFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMKASGWA 206 (409)
T ss_dssp CCEEEEEECS--TTEEEEEETTTTEEEEEETTTTE-EEEEEETCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEGGGTTC
T ss_pred CCceEEEEeC--CCCEEEEecCCCcEEEEECCCCE-EEEeeccCCCCc-eeEecCCCcEEEEecCCCceEEEEEcCCCce
Confidence 4678999999 99988888888999999997764 444443333344 99999999998888766 799999876654
Q ss_pred EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108 126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDF 205 (703)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~ 205 (703)
...+..... .....+.+++++|++..|+++..++.|+.||..++.. ..+.........+ ..+
T Consensus 207 ~~~~g~~~~----------------~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~~-~~~~~~~~~g~~~-~~P 268 (409)
T 3hrp_A 207 PTRIGQLGS----------------TFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQEV-TLIKQLELSGSLG-TNP 268 (409)
T ss_dssp EEEEEECCT----------------TSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCCE-EEEEECCCCSCCC-CSS
T ss_pred eEEeeeccc----------------hhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCCE-EEEecccccCCCC-CCc
Confidence 433311000 0112567899999655666677788999999987753 2332111100001 001
Q ss_pred ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---------------ccceEEEEEcCCCCEEEEEe
Q psy7108 206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---------------EVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---------------~~~V~~l~~spdg~~l~s~s 270 (703)
...++++|++..++++.... ..|+.|+.... ...+.++ -.....++++|+|+.+++-+
T Consensus 269 ~~~ia~~p~~g~lyv~d~~~-----~~I~~~~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~ 341 (409)
T 3hrp_A 269 GPYLIYYFVDSNFYMSDQNL-----SSVYKITPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDG 341 (409)
T ss_dssp CCEEEEETTTTEEEEEETTT-----TEEEEECTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEET
T ss_pred cccEEEeCCCCEEEEEeCCC-----CEEEEEecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeC
Confidence 13899999655555543321 37888886543 2222221 13478999999999666666
Q ss_pred -CCC-EEEEEcCCCce
Q psy7108 271 -TEG-VHIYSLDSGYV 284 (703)
Q Consensus 271 -~Dg-v~iwd~~~~~~ 284 (703)
.++ |+.|+..++..
T Consensus 342 ~~~~~I~~~~~~~G~v 357 (409)
T 3hrp_A 342 FKGYCLRKLDILDGYV 357 (409)
T ss_dssp TTTCEEEEEETTTTEE
T ss_pred CCCCEEEEEECCCCEE
Confidence 566 99999777654
No 203
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=99.08 E-value=2.4e-09 Score=123.98 Aligned_cols=198 Identities=11% Similarity=0.018 Sum_probs=125.2
Q ss_pred EEEEEcCCCCCCEEEEEeCCCc-------------EEEEEcCCCcee-EEEe---cCCCcEEEEEEecCCCEEEEEECCC
Q psy7108 51 SCIEFSPVLSSTGMVSASWDKT-------------VKLWNAVETDTQ-HETI---QLLSDALCVAYKPDGTEIVVATLDG 113 (703)
Q Consensus 51 ~~l~~sp~~dg~~L~sgs~Dg~-------------V~iWd~~~~~~~-~~~~---~~~~~V~~v~~spdg~~las~s~dg 113 (703)
.+++|+| ||+.|+.++.|.. |++|++.++... ..+. .+...+.++.|+|||++|+.++.++
T Consensus 171 ~~~~wsp--Dg~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~ 248 (695)
T 2bkl_A 171 ATPKWTP--DSKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRG 248 (695)
T ss_dssp CCCEECT--TSSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEET
T ss_pred cceEEec--CCCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCC
Confidence 6899999 9999999998876 999999877522 2222 2445788999999999998887666
Q ss_pred ----eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe---cCCcEEEEECCCCc
Q psy7108 114 ----QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG---QSKYICIYSSREGI 186 (703)
Q Consensus 114 ----~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s---~dg~I~lwD~~~~~ 186 (703)
.|++||..+++... +..+.. .+....+ ++|++++.+. .++.|.+||+.++.
T Consensus 249 ~~~~~l~~~~~~~~~~~~-l~~~~~--------------------~~~~~~~-~~g~l~~~s~~~~~~~~l~~~d~~~~~ 306 (695)
T 2bkl_A 249 WSENDVYWKRPGEKDFRL-LVKGVG--------------------AKYEVHA-WKDRFYVLTDEGAPRQRVFEVDPAKPA 306 (695)
T ss_dssp TTEEEEEEECTTCSSCEE-EEECSS--------------------CCEEEEE-ETTEEEEEECTTCTTCEEEEEBTTBCS
T ss_pred CCceEEEEEcCCCCceEE-eecCCC--------------------ceEEEEe-cCCcEEEEECCCCCCCEEEEEeCCCCC
Confidence 67777766555433 333222 3444555 5666434433 25789999998765
Q ss_pred e--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceEEEEEcCCC
Q psy7108 187 L--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTG 263 (703)
Q Consensus 187 ~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg 263 (703)
. ...+..+.. ...+..++++ ++..++....++ ...+.+++.. ++....+..+ ...+..++++|++
T Consensus 307 ~~~~~~l~~~~~------~~~l~~~~~~-~~~lv~~~~~dg----~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~ 374 (695)
T 2bkl_A 307 RASWKEIVPEDS------SASLLSVSIV-GGHLSLEYLKDA----TSEVRVATLK-GKPVRTVQLPGVGAASNLMGLEDL 374 (695)
T ss_dssp GGGCEEEECCCS------SCEEEEEEEE-TTEEEEEEEETT----EEEEEEEETT-CCEEEECCCSSSSEECCCBSCTTC
T ss_pred ccCCeEEecCCC------CCeEEEEEEE-CCEEEEEEEECC----EEEEEEEeCC-CCeeEEecCCCCeEEEEeecCCCC
Confidence 3 223322210 1256677777 455444444332 2344444543 4444444444 5678888999999
Q ss_pred CEEEE-EeC---CC-EEEEEcCCCce
Q psy7108 264 QAWVA-ATT---EG-VHIYSLDSGYV 284 (703)
Q Consensus 264 ~~l~s-~s~---Dg-v~iwd~~~~~~ 284 (703)
+.++. .+. .+ +++||+.+++.
T Consensus 375 ~~l~~~~ss~~~P~~v~~~d~~~g~~ 400 (695)
T 2bkl_A 375 DDAYYVFTSFTTPRQIYKTSVSTGKS 400 (695)
T ss_dssp SEEEEEEEETTEEEEEEEEETTTCCE
T ss_pred CEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 87753 322 34 88999988763
No 204
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.08 E-value=1.4e-08 Score=107.65 Aligned_cols=215 Identities=9% Similarity=0.066 Sum_probs=138.3
Q ss_pred ceeec-cCCCccccccccC------CCcCeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEecCCCcEEEEE
Q psy7108 28 VKKGD-MAARVLKPEVLSG------HEGPVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQLLSDALCVA 98 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~g------H~~~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~ 98 (703)
+..|| .+++.+ ..+.. +......++++| ||++|++++. +++|.+||+.+++....+....+ ...+.
T Consensus 83 v~v~d~~t~~~~--~~i~~~~~~~~~g~~p~~i~~sp--dg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~-~~~v~ 157 (361)
T 2oiz_A 83 VEVWDADKLTFE--KEISLPPKRVQGLNYDGLFRQTT--DGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAG-CWSVI 157 (361)
T ss_dssp EEEEETTTCCEE--EEEEECTTBCCBCCCGGGEEECT--TSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTT-EEEEE
T ss_pred EEEEECcCCcEE--EEEEcCccccccCCCcceEEECC--CCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCC-cceeE
Confidence 45565 355665 55442 224567899999 9999998864 58999999998854443144432 23356
Q ss_pred EecCC-CEEEEEECCCeEEEEEcCC-CcEEEEEeccccCCCCCCC--------C----------ccchhhc---------
Q psy7108 99 YKPDG-TEIVVATLDGQLIMFDVES-AAQVGSVEARRDLDSGRLD--------T----------DLVTREQ--------- 149 (703)
Q Consensus 99 ~spdg-~~las~s~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~~~--------~----------~~~~~~~--------- 149 (703)
+.|++ ..+++.+.||.+.+|+.+. ++..........+..+... . .......
T Consensus 158 ~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~ 237 (361)
T 2oiz_A 158 PQPNRPRSFMTICGDGGLLTINLGEDGKVASQSRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDG 237 (361)
T ss_dssp ECTTSSSEEEEEETTSSEEEEEECTTSSEEEEEECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEE
T ss_pred EcCCCCeeEEEECCCCcEEEEEECCCCcEeeeccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecc
Confidence 67766 5677778888888888765 4443222100000000000 0 0000000
Q ss_pred --------ccC----CccEEEEEEcCCCCEEEEEec-----------CCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108 150 --------SLK----AKAVSTVCYSADGSCILAAGQ-----------SKYICIYSSREGILLKKFTITQNKSLDGINDFI 206 (703)
Q Consensus 150 --------~~~----~~~V~~i~~spdg~~l~s~s~-----------dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v 206 (703)
..+ ......++|+||++.++++.. ++.|.+||+.+++.+.++..+ . .
T Consensus 238 ~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~---------~-p 307 (361)
T 2oiz_A 238 PWSLLNDEDKAKNWVPGGYNLVGLHRASGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGR---------D-A 307 (361)
T ss_dssp EEESCCHHHHHTTCEECCSSCEEEETTTTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECT---------T-C
T ss_pred cccccCccccccccccCCeeEEEEecCCCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEEecC---------C-e
Confidence 000 001112689999888887643 347999999999998887632 1 6
Q ss_pred eeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC--ccceeecCCccceEEEEEcCCCC
Q psy7108 207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG--DMAARVLKPEVRVFCVKFSPTGQ 264 (703)
Q Consensus 207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~--~~~~~~~~h~~~V~~l~~spdg~ 264 (703)
..++|+|||+++++++. + .|.+||..++ +.+..+.........++++|+|+
T Consensus 308 ~~ia~spdg~~l~v~n~-~------~v~v~D~~t~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 308 LSMTIDQQRNLMLTLDG-G------NVNVYDISQPEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp CEEEEETTTTEEEEECS-S------CEEEEECSSSSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred eEEEECCCCCEEEEeCC-C------eEEEEECCCCcceeeEEeccCCCCcEEEEecCCCC
Confidence 78999999998887664 2 7999999999 88877766777788999999986
No 205
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=99.06 E-value=2.9e-08 Score=102.12 Aligned_cols=215 Identities=11% Similarity=0.116 Sum_probs=140.3
Q ss_pred ceeec-cCCCcccccccc----CCCcCeEEEEEcCCCC-CCEEEEEeCCCcEEEEEcCCCceeEEE-ec-----CCCcEE
Q psy7108 28 VKKGD-MAARVLKPEVLS----GHEGPVSCIEFSPVLS-STGMVSASWDKTVKLWNAVETDTQHET-IQ-----LLSDAL 95 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~----gH~~~V~~l~~sp~~d-g~~L~sgs~Dg~V~iWd~~~~~~~~~~-~~-----~~~~V~ 95 (703)
+..|+ .+++.. .... ++...+.++++++ + ++++++.. ++.|.+||.. ++ .... .. ....+.
T Consensus 48 i~~~d~~~g~~~--~~~~~~~~~~~~~~~~i~~~~--~~g~l~v~~~-~~~l~~~d~~-g~-~~~~~~~~~~~~~~~~~~ 120 (314)
T 1pjx_A 48 ILRIDLKTGKKT--VICKPEVNGYGGIPAGCQCDR--DANQLFVADM-RLGLLVVQTD-GT-FEEIAKKDSEGRRMQGCN 120 (314)
T ss_dssp EEEECTTTCCEE--EEECCEETTEECCEEEEEECS--SSSEEEEEET-TTEEEEEETT-SC-EEECCSBCTTSCBCBCCC
T ss_pred EEEEeCCCCcEE--EEEecccCCCCCCCceEEEec--CCCcEEEEEC-CCCEEEEeCC-CC-EEEEEeccCCCccccCCc
Confidence 55566 355543 2211 2557799999999 8 66555554 4478899987 53 3333 22 123478
Q ss_pred EEEEecCCCEEEEEECC---------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108 96 CVAYKPDGTEIVVATLD---------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160 (703)
Q Consensus 96 ~v~~spdg~~las~s~d---------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~ 160 (703)
+++++++|+.+++...+ +.|..||.+ ++......... ....++
T Consensus 121 ~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~---------------------~~~~i~ 178 (314)
T 1pjx_A 121 DCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQ---------------------FPNGIA 178 (314)
T ss_dssp EEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEES---------------------SEEEEE
T ss_pred CEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCC---------------------CcceEE
Confidence 99999999887776554 567777765 55433322211 467889
Q ss_pred Ec----CCCCEEEEE-ecCCcEEEEECC-CCceEE--EEEeccCCcccccc-ccceeeeeccCCCEEEEEcccCCCCCee
Q psy7108 161 YS----ADGSCILAA-GQSKYICIYSSR-EGILLK--KFTITQNKSLDGIN-DFINRRKMTEFGNVSLIETRETHEGGNV 231 (703)
Q Consensus 161 ~s----pdg~~l~s~-s~dg~I~lwD~~-~~~~~~--~~~~~~~~~~~~~~-~~v~~~~~spdg~~l~~~~~~~~~~~~~ 231 (703)
|+ |+++.+.++ ..++.|.+||+. +++... .+.. ..... .....++++++|+..++.... .
T Consensus 179 ~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~-----~~~~~~~~p~~i~~d~~G~l~v~~~~~------~ 247 (314)
T 1pjx_A 179 VRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGH-----IPGTHEGGADGMDFDEDNNLLVANWGS------S 247 (314)
T ss_dssp EEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEE-----CCCCSSCEEEEEEEBTTCCEEEEEETT------T
T ss_pred EecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEE-----CCCCCCCCCCceEECCCCCEEEEEcCC------C
Confidence 99 999766555 567889999986 443211 1111 11111 246778999999876665433 2
Q ss_pred EEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEcCCC
Q psy7108 232 VLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSLDSG 282 (703)
Q Consensus 232 ~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~~~~ 282 (703)
.|.+||..+++....+..+...+.+++|+|+|+.|..++. ++ |..|++...
T Consensus 248 ~i~~~d~~~g~~~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~ 300 (314)
T 1pjx_A 248 HIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRN 300 (314)
T ss_dssp EEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSC
T ss_pred EEEEEcCCCCcEeEEEeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCC
Confidence 6899998877776666666678999999999996655544 45 999998653
No 206
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=99.04 E-value=7.3e-08 Score=98.93 Aligned_cols=203 Identities=10% Similarity=0.019 Sum_probs=130.2
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecC
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spd 102 (703)
+..||..+... ..+. +...+.+++++| +|+++++. ++.|.+||..+++ ...+... ...+.+++++|+
T Consensus 37 i~~~d~~~~~~--~~~~-~~~~~~~i~~~~--dG~l~v~~--~~~l~~~d~~~g~-~~~~~~~~~~~~~~~~~di~~d~d 108 (297)
T 3g4e_A 37 VCRWDSFTKQV--QRVT-MDAPVSSVALRQ--SGGYVATI--GTKFCALNWKEQS-AVVLATVDNDKKNNRFNDGKVDPA 108 (297)
T ss_dssp EEEEETTTCCE--EEEE-CSSCEEEEEEBT--TSSEEEEE--TTEEEEEETTTTE-EEEEEECCTTCSSEEEEEEEECTT
T ss_pred EEEEECCCCcE--EEEe-CCCceEEEEECC--CCCEEEEE--CCeEEEEECCCCc-EEEEEecCCCCCCCCCCCEEECCC
Confidence 33455444333 3332 456799999999 99966554 5679999987764 3333222 234788999999
Q ss_pred CCEEEEEECC---------CeEEEEEcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-
Q psy7108 103 GTEIVVATLD---------GQLIMFDVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA- 171 (703)
Q Consensus 103 g~~las~s~d---------g~I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~- 171 (703)
|+++++...+ ..-.+|.++. ++....... .. ....++|+||++.|+.+
T Consensus 109 G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~-~~--------------------~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 109 GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQ-VD--------------------ISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEE-ES--------------------BEEEEEECTTSCEEEEEE
T ss_pred CCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeec-cc--------------------cccceEEcCCCCEEEEec
Confidence 9966654322 2334554443 333222222 11 46789999999977554
Q ss_pred ecCCcEEEEEC--CCCceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee
Q psy7108 172 GQSKYICIYSS--REGILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV 247 (703)
Q Consensus 172 s~dg~I~lwD~--~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~ 247 (703)
+.++.|..||+ .++... +.+... .........++++++|+..++.... ..|..||..+++....+
T Consensus 168 ~~~~~i~~~~~d~~~G~~~~~~~~~~~-----~~~~~~p~g~~~d~~G~lwva~~~~------~~v~~~d~~tG~~~~~i 236 (297)
T 3g4e_A 168 SLSYSVDAFDYDLQTGQISNRRSVYKL-----EKEEQIPDGMCIDAEGKLWVACYNG------GRVIRLDPVTGKRLQTV 236 (297)
T ss_dssp GGGTEEEEEEECTTTCCEEEEEEEEEC-----CGGGCEEEEEEEBTTSCEEEEEETT------TEEEEECTTTCCEEEEE
T ss_pred CCCCcEEEEeccCCCCcccCcEEEEEC-----CCCCCCCCeeEECCCCCEEEEEcCC------CEEEEEcCCCceEEEEE
Confidence 55788999997 456432 112110 1112356778999999765554433 26999999989888888
Q ss_pred cCCccceEEEEEc-CCCCEEEEEe
Q psy7108 248 LKPEVRVFCVKFS-PTGQAWVAAT 270 (703)
Q Consensus 248 ~~h~~~V~~l~~s-pdg~~l~s~s 270 (703)
..+...+++++|. |+++.|..++
T Consensus 237 ~~p~~~~t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 237 KLPVDKTTSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp ECSSSBEEEEEEESGGGCEEEEEE
T ss_pred ECCCCCceEEEEeCCCCCEEEEEc
Confidence 7777789999998 8988775544
No 207
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=99.02 E-value=7.4e-09 Score=120.73 Aligned_cols=234 Identities=10% Similarity=0.035 Sum_probs=139.1
Q ss_pred EeeecccCCceEEecC-------Cceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCc----------
Q psy7108 11 ETRETHEGGNVVLKLP-------GVKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKT---------- 72 (703)
Q Consensus 11 ~~~~~~~~~~~~i~~~-------~v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~---------- 72 (703)
...+..+|...++... .+.+||. +|+.+ . ...+...+..++|+| | +.|+.++.|+.
T Consensus 167 ~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~--~-~~~~~~~~~~~~wsp--D-~~l~~~~~~~~~~~~~~~~~~ 240 (741)
T 1yr2_A 167 AWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPL--A-DELKWVKFSGLAWLG--N-DALLYSRFAEPKEGQAFQALN 240 (741)
T ss_dssp EEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEE--E-EEEEEEESCCCEEST--T-SEEEEEECCCC--------CC
T ss_pred eEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCC--C-ccCCCceeccEEEEC--C-CEEEEEEecCcccccccccCC
Confidence 3344445554444432 2566674 44443 2 222222236789999 9 99988877654
Q ss_pred ----EEEEEcCCCcee-EEEec---CCCcEEEEEEecCCCEEEEEECCC-----eEEEEEcCCC--cEEEEEeccccCCC
Q psy7108 73 ----VKLWNAVETDTQ-HETIQ---LLSDALCVAYKPDGTEIVVATLDG-----QLIMFDVESA--AQVGSVEARRDLDS 137 (703)
Q Consensus 73 ----V~iWd~~~~~~~-~~~~~---~~~~V~~v~~spdg~~las~s~dg-----~I~vwd~~~~--~~~~~~~~~~~~~~ 137 (703)
|++|++.++... ..+.. +...+.++.|||||++|+..+.++ .|++||+.++ +....+..+..
T Consensus 241 ~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~--- 317 (741)
T 1yr2_A 241 YNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLK--- 317 (741)
T ss_dssp CCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSS---
T ss_pred CCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCC---
Confidence 889998776521 22222 223588999999999998877554 8999999877 31334433322
Q ss_pred CCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC----CcEEEEECCCCc-eEEEEEeccCCccccccccceeeeec
Q psy7108 138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS----KYICIYSSREGI-LLKKFTITQNKSLDGINDFINRRKMT 212 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d----g~I~lwD~~~~~-~~~~~~~~~~~~~~~~~~~v~~~~~s 212 (703)
.+... ++|+|+.|+..+.+ +.|.+||+.++. ....+..+. ...+..++++
T Consensus 318 -----------------~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~~~~~~~l~~~~-------~~~l~~~~~~ 372 (741)
T 1yr2_A 318 -----------------AQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGSTPRFDTVVPES-------KDNLESVGIA 372 (741)
T ss_dssp -----------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSSSCEEEEEECCC-------SSEEEEEEEE
T ss_pred -----------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCCccccEEEecCC-------CCeEEEEEEE
Confidence 23333 34889988887653 459999998752 333332221 1245556666
Q ss_pred cCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-CccceEEEEEcCCCCEEE-EEeC---CC-EEEEEcCCCce
Q psy7108 213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-PEVRVFCVKFSPTGQAWV-AATT---EG-VHIYSLDSGYV 284 (703)
Q Consensus 213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-h~~~V~~l~~spdg~~l~-s~s~---Dg-v~iwd~~~~~~ 284 (703)
++..++....+ +...|.+++.. ++....+.. +...+..++++|+++.++ +.+. .+ +.+||+.+++.
T Consensus 373 -~~~lv~~~~~d----g~~~l~~~~~~-g~~~~~l~~~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~~ 444 (741)
T 1yr2_A 373 -GNRLFASYIHD----AKSQVLAFDLD-GKPAGAVSLPGIGSASGLSGRPGDRHAYLSFSSFTQPATVLALDPATAKT 444 (741)
T ss_dssp -BTEEEEEEEET----TEEEEEEEETT-SCEEEECBCSSSCEEEEEECCBTCSCEEEEEEETTEEEEEEEEETTTTEE
T ss_pred -CCEEEEEEEEC----CEEEEEEEeCC-CCceeeccCCCCeEEEEeecCCCCCEEEEEEcCCCCCCEEEEEECCCCcE
Confidence 34444443332 22345555653 444444443 356788999999998664 3332 24 88999988763
No 208
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=99.02 E-value=1.8e-08 Score=104.00 Aligned_cols=225 Identities=10% Similarity=0.061 Sum_probs=144.1
Q ss_pred ccccCCCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFD 119 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd 119 (703)
+.+..+.....+..|+| +++ ++++...++.|..|+. +++ ..........+..++++++|+++++...++.|.+||
T Consensus 38 ~~l~~~~~~~egp~~~~--~g~~l~~~d~~~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~ 113 (305)
T 3dr2_A 38 LTLYDQATWSEGPAWWE--AQRTLVWSDLVGRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSD 113 (305)
T ss_dssp EEEECCCSSEEEEEEEG--GGTEEEEEETTTTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEEC
T ss_pred EEEecCCcCccCCeEeC--CCCEEEEEECCCCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEEC
Confidence 56666677788999999 888 6677778889999997 443 444455667789999999999766655568899999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE----Eec-------------CCcEEEEEC
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA----AGQ-------------SKYICIYSS 182 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s----~s~-------------dg~I~lwD~ 182 (703)
.+ ++.. .+..... ......+..++++|+|+..++ |.. .+.|..+|.
T Consensus 114 ~~-g~~~-~~~~~~~---------------~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~ 176 (305)
T 3dr2_A 114 AD-GQAH-LLVGRYA---------------GKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPP 176 (305)
T ss_dssp TT-SCEE-EEECEET---------------TEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECS
T ss_pred CC-CCEE-EEEeccC---------------CCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcC
Confidence 86 5533 2221110 000124567999999998876 332 256888888
Q ss_pred CCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eee-cCCccceEEEEE
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARV-LKPEVRVFCVKF 259 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~-~~h~~~V~~l~~ 259 (703)
.+++..... .. ...+.++|+||++.++++.......+...|..|++..+... ..+ ......+..+++
T Consensus 177 ~~g~~~~~~--~~--------~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~~~~~pdgi~~ 246 (305)
T 3dr2_A 177 DGSPLQRMA--DL--------DHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHFASVPDGLPDGFCV 246 (305)
T ss_dssp SSCCCEEEE--EE--------SSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEEECCSSSCCCSEEE
T ss_pred CCCcEEEEe--cC--------CCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEEEECCCCCCCeEEE
Confidence 776654332 11 14567999999997777654311111236888887654311 111 112334567899
Q ss_pred cCCCCEEEEEeCCCEEEEEcCCCceecce-----eeeEEEccch
Q psy7108 260 SPTGQAWVAATTEGVHIYSLDSGYVFDPF-----LLDISITPQS 298 (703)
Q Consensus 260 spdg~~l~s~s~Dgv~iwd~~~~~~~~~~-----~~~~~~spd~ 298 (703)
+++|+..+ ++.++|.+|+.+ ++.+..+ ...++|++++
T Consensus 247 d~~G~lwv-~~~~gv~~~~~~-g~~~~~~~~~~~~~~~~f~~d~ 288 (305)
T 3dr2_A 247 DRGGWLWS-SSGTGVCVFDSD-GQLLGHIPTPGTASNCTFDQAQ 288 (305)
T ss_dssp CTTSCEEE-CCSSEEEEECTT-SCEEEEEECSSCCCEEEECTTS
T ss_pred CCCCCEEE-ecCCcEEEECCC-CCEEEEEECCCceeEEEEeCCC
Confidence 99999544 445669999984 5444333 2457777766
No 209
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=99.02 E-value=3.9e-07 Score=92.66 Aligned_cols=243 Identities=9% Similarity=0.086 Sum_probs=156.3
Q ss_pred cccCCceEEecC--CceeeccCCCccccc-cccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-C
Q psy7108 15 THEGGNVVLKLP--GVKKGDMAARVLKPE-VLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-L 90 (703)
Q Consensus 15 ~~~~~~~~i~~~--~v~~~d~tg~~~~~~-~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-~ 90 (703)
...|..++.... .+..++..++.. . .+..+...+.++++++ ++.++++...++.|..+|.. +........ .
T Consensus 28 d~~g~l~v~~~~~~~v~~~~~~~~~~--~~~~~~~~~~~~~i~~~~--~g~l~v~~~~~~~v~~~d~~-g~~~~~~~~~~ 102 (300)
T 2qc5_A 28 SEDGKVWFTQHKANKISSLDQSGRIK--EFEVPTPDAKVMCLIVSS--LGDIWFTENGANKIGKLSKK-GGFTEYPLPQP 102 (300)
T ss_dssp CTTSCEEEEETTTTEEEEECTTSCEE--EEECSSTTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SCEEEEECSST
T ss_pred CCCCCEEEEcCCCCeEEEECCCCceE--EEECCCCCCcceeEEECC--CCCEEEEecCCCeEEEECCC-CCeEEecCCCC
Confidence 344444444332 255566555543 2 2233446789999999 89988887777889999976 433221111 3
Q ss_pred CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE
Q psy7108 91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA 170 (703)
Q Consensus 91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s 170 (703)
...+.++++.++|+.+++...++.|..+|.+ ++... +.... ....+..++++++|+..++
T Consensus 103 ~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~~-~~~~~------------------~~~~~~~i~~d~~g~l~v~ 162 (300)
T 2qc5_A 103 DSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIYE-YDLPN------------------KGSYPAFITLGSDNALWFT 162 (300)
T ss_dssp TCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEE-EECSS------------------TTCCEEEEEECTTSSEEEE
T ss_pred CCCCccceECCCCCEEEEccCCCeEEEECCC-CCEEE-ccCCC------------------CCCCceeEEECCCCCEEEE
Confidence 4678999999999887777668899999987 55442 22110 1226789999999997666
Q ss_pred EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecC
Q psy7108 171 AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLK 249 (703)
Q Consensus 171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~ 249 (703)
...++.|..+|. +++... +.... ....+..++++++|...++.... ..|..+|. +++.... ...
T Consensus 163 ~~~~~~i~~~~~-~g~~~~-~~~~~------~~~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~ 227 (300)
T 2qc5_A 163 ENQNNSIGRITN-TGKLEE-YPLPT------NAAAPVGITSGNDGALWFVEIMG------NKIGRITT-TGEISEYDIPT 227 (300)
T ss_dssp ETTTTEEEEECT-TCCEEE-EECSS------TTCCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSS
T ss_pred ecCCCeEEEECC-CCcEEE-eeCCC------CCCCcceEEECCCCCEEEEccCC------CEEEEEcC-CCcEEEEECCC
Confidence 666788999998 555433 32211 12356789999999866665443 26888887 4443322 223
Q ss_pred CccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceec-------ceeeeEEEccch
Q psy7108 250 PEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFD-------PFLLDISITPQS 298 (703)
Q Consensus 250 h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~-------~~~~~~~~spd~ 298 (703)
+...+.+++++++|+.+++...++ |..|+.. ++... .....+.+++++
T Consensus 228 ~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~~~~g 283 (300)
T 2qc5_A 228 PNARPHAITAGKNSEIWFTEWGANQIGRITND-NTIQEYQLQTENAEPHGITFGKDG 283 (300)
T ss_dssp TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEEEEECCSTTCCCCCEEECTTS
T ss_pred CCCCceEEEECCCCCEEEeccCCCeEEEECCC-CcEEEEECCccCCccceeEeCCCC
Confidence 456688999999998666665556 9999873 43221 112456777777
No 210
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.97 E-value=2.7e-07 Score=96.11 Aligned_cols=211 Identities=14% Similarity=0.111 Sum_probs=134.6
Q ss_pred CeEEEEEcCCCCC-CEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEE
Q psy7108 49 PVSCIEFSPVLSS-TGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVG 127 (703)
Q Consensus 49 ~V~~l~~sp~~dg-~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~ 127 (703)
-..+.+|+| ++ .++++...++.|..||..++.. . .......+.+++|+|+|+++++. +..|.+||.++++...
T Consensus 50 ~~egp~~~~--~~~~l~~~d~~~~~i~~~d~~~~~~-~-~~~~~~~v~~i~~~~dg~l~v~~--~~gl~~~d~~~g~~~~ 123 (326)
T 2ghs_A 50 LGEGPTFDP--ASGTAWWFNILERELHELHLASGRK-T-VHALPFMGSALAKISDSKQLIAS--DDGLFLRDTATGVLTL 123 (326)
T ss_dssp BEEEEEEET--TTTEEEEEEGGGTEEEEEETTTTEE-E-EEECSSCEEEEEEEETTEEEEEE--TTEEEEEETTTCCEEE
T ss_pred CCcCCeEeC--CCCEEEEEECCCCEEEEEECCCCcE-E-EEECCCcceEEEEeCCCeEEEEE--CCCEEEEECCCCcEEE
Confidence 456789999 64 5566666788999999877642 2 23445689999999999877654 3459999998887543
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTITQNKSLDG 201 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~~~~~~~~~ 201 (703)
....... .....+.+++++|+|+++++... .+.|..+| +++... +....
T Consensus 124 ~~~~~~~----------------~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~-~~~~~------ 178 (326)
T 2ghs_A 124 HAELESD----------------LPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTK-LFADI------ 178 (326)
T ss_dssp EECSSTT----------------CTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEE-EEEEE------
T ss_pred EeeCCCC----------------CCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEE-eeCCC------
Confidence 3221100 01225889999999997765542 24566666 454332 22111
Q ss_pred ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CC-ccc-----eeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108 202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KG-DMA-----ARVLKPEVRVFCVKFSPTGQAWVAATTEG 273 (703)
Q Consensus 202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~-~~~-----~~~~~h~~~V~~l~~spdg~~l~s~s~Dg 273 (703)
...+.++|+|+|+.++++.... ..|.+||.. ++ +.. ..+......+.+++++++|+.+++...++
T Consensus 179 --~~~~~i~~s~dg~~lyv~~~~~-----~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~ 251 (326)
T 2ghs_A 179 --SIPNSICFSPDGTTGYFVDTKV-----NRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEG 251 (326)
T ss_dssp --SSEEEEEECTTSCEEEEEETTT-----CEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTT
T ss_pred --cccCCeEEcCCCCEEEEEECCC-----CEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCC
Confidence 1456799999999776654321 378888875 55 321 11222345678899999998777766556
Q ss_pred -EEEEEcCCCceecce------eeeEEEc-cch
Q psy7108 274 -VHIYSLDSGYVFDPF------LLDISIT-PQS 298 (703)
Q Consensus 274 -v~iwd~~~~~~~~~~------~~~~~~s-pd~ 298 (703)
|.+|+. +++....+ ..+++|+ +++
T Consensus 252 ~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~ 283 (326)
T 2ghs_A 252 AVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDA 283 (326)
T ss_dssp EEEEECT-TCCEEEEEECSCSBEEEEEEESTTS
T ss_pred EEEEECC-CCCEEEEEECCCCCcEEEEEecCCC
Confidence 999998 45543332 2345665 544
No 211
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.95 E-value=1.5e-07 Score=100.04 Aligned_cols=248 Identities=8% Similarity=-0.056 Sum_probs=145.3
Q ss_pred EcCCCCCCEEEEEeC--CC---cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCCeEEEEE
Q psy7108 55 FSPVLSSTGMVSASW--DK---TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDGQLIMFD 119 (703)
Q Consensus 55 ~sp~~dg~~L~sgs~--Dg---~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg~I~vwd 119 (703)
..| ++.+++.+.. .. +|.++|..+++....+..... . .++++|||+.++++. .++.|.+||
T Consensus 28 ~~~--~~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~~i~~g~~-p-~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 28 PGA--DGRRSYINLPAHHSAIIQQWVLDAGSGSILGHVNGGFL-P-NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred CCC--CCCEEEEeCCcccCCccEEEEEECCCCeEEEEecCCCC-C-CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 346 7787777653 22 789999988865444333333 3 999999999998886 367899999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEE-EEeccC
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKK-FTITQN 196 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~-~~~~~~ 196 (703)
..+.+.+..+..... . ..........++|+|||++|++++. ++.|.++| .+++.+.+ +.....
T Consensus 104 ~~t~~~~~~i~~~~~---~----------~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~~~~ 169 (373)
T 2mad_H 104 PVTFLPIADIELPDA---P----------RFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSSPTC 169 (373)
T ss_pred CCCCcEEEEEECCCc---c----------ccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCCCce
Confidence 999888877654200 0 0000112357899999999999874 47899999 99988777 543221
Q ss_pred CccccccccceeeeeccCCCEEEEEcccCCCC-------------------------C-------eeEEECCCCCCCcc-
Q psy7108 197 KSLDGINDFINRRKMTEFGNVSLIETRETHEG-------------------------G-------NVVLKLPGVKKGDM- 243 (703)
Q Consensus 197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~-------------------------~-------~~~i~iwd~~~~~~- 243 (703)
...... ..-.-+.++++|+.+++.. .+... + ...+.+.|..+...
T Consensus 170 ~~~~~~-~~~~~~~~~~dg~~~~vd~-~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~v~vid~~~~~~~ 247 (373)
T 2mad_H 170 YHIHPG-APSTFYLLCAQGGLAKTDH-AGGAAGAGLVGAMLTAAQNLLTQPAQANKSGRIVWPVYSGKILQADISAAGAT 247 (373)
T ss_pred EEEEeC-CCceEEEEcCCCCEEEEEC-CCcEEEEEeccccccCCcceeecceeEecCCEEEEEcCCceEEEEeccCCcce
Confidence 000000 0001134445555444433 21000 0 01233333322210
Q ss_pred -ceeecC----------CccceEEEEEcCCCCEEEEEeC----------CC-EEEEEcCCCceeccee-----eeEEEcc
Q psy7108 244 -AARVLK----------PEVRVFCVKFSPTGQAWVAATT----------EG-VHIYSLDSGYVFDPFL-----LDISITP 296 (703)
Q Consensus 244 -~~~~~~----------h~~~V~~l~~spdg~~l~s~s~----------Dg-v~iwd~~~~~~~~~~~-----~~~~~sp 296 (703)
...+.- .......+.++||++.+.++.. .+ |.++|..+++....+. ..+.|+|
T Consensus 248 v~~~~~~~~~~~~~~~~~p~g~~~~~~s~d~~~lyV~~~~~~~~~~~~~~~~V~VID~~t~~vv~~i~~g~~p~~i~~s~ 327 (373)
T 2mad_H 248 NKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKLHAAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQ 327 (373)
T ss_pred EeeeeeecCCcccccceecCceEeEEECCCCCEEEEEeccCCcccccCCCCeEEEEECCCCEEEEEEECCCCcCeEEECC
Confidence 011100 0112334788999988866543 23 8999999988866553 5799999
Q ss_pred chhhhHhhcCC-cceEEEEEEecCchhHH
Q psy7108 297 QSVKEALADKD-YAKALMMSLKLNEQGLI 324 (703)
Q Consensus 297 d~~~~~l~sg~-~~~~l~la~~l~~~~~~ 324 (703)
|+.. .+...+ .++.+.+ ++....+.+
T Consensus 328 Dg~~-~l~v~~~~~~~V~V-iD~~t~~vv 354 (373)
T 2mad_H 328 DGGP-DLYALSAGTEVLHI-YDAGAGDQD 354 (373)
T ss_pred CCCe-EEEEEcCCCCeEEE-EECCCCCEE
Confidence 9932 344444 4677776 777655443
No 212
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.95 E-value=6.7e-08 Score=99.56 Aligned_cols=207 Identities=10% Similarity=0.048 Sum_probs=136.6
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecC
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spd 102 (703)
+..|+.+|+. ..+..+...+.++++++ +|+++++...++.|.+|+.. +. ...+... ...+.+++++|+
T Consensus 69 i~~~~~~g~~---~~~~~~~~~~~gl~~d~--dG~l~v~~~~~~~v~~~~~~-g~-~~~~~~~~~~~~~~~~~~i~~d~d 141 (305)
T 3dr2_A 69 VLGWREDGTV---DVLLDATAFTNGNAVDA--QQRLVHCEHGRRAITRSDAD-GQ-AHLLVGRYAGKRLNSPNDLIVARD 141 (305)
T ss_dssp EEEEETTSCE---EEEEESCSCEEEEEECT--TSCEEEEETTTTEEEEECTT-SC-EEEEECEETTEECSCCCCEEECTT
T ss_pred EEEEeCCCCE---EEEeCCCCccceeeECC--CCCEEEEECCCCEEEEECCC-CC-EEEEEeccCCCccCCCCCEEECCC
Confidence 3445666653 45556677899999999 99977766666789999975 43 3322221 134668999999
Q ss_pred CCEEEE----EEC-------------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC
Q psy7108 103 GTEIVV----ATL-------------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG 165 (703)
Q Consensus 103 g~~las----~s~-------------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg 165 (703)
|+..++ |.. .+.|..+|..+++..... . .. ....++|+||+
T Consensus 142 G~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~-~~--------------------~p~gl~~spdg 199 (305)
T 3dr2_A 142 GAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-D-LD--------------------HPNGLAFSPDE 199 (305)
T ss_dssp SCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-E-ES--------------------SEEEEEECTTS
T ss_pred CCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-c-CC--------------------CCcceEEcCCC
Confidence 998876 332 246788887666654333 2 11 46789999999
Q ss_pred CEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108 166 SCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK 239 (703)
Q Consensus 166 ~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~ 239 (703)
+.|+++... +.|..||+..+. +......... .......++++++|+. .+++.+ .|.+|+.
T Consensus 200 ~~lyv~~~~~~~~~~~~i~~~~~~~~~-l~~~~~~~~~----~~~~pdgi~~d~~G~l-wv~~~~-------gv~~~~~- 265 (305)
T 3dr2_A 200 QTLYVSQTPEQGHGSVEITAFAWRDGA-LHDRRHFASV----PDGLPDGFCVDRGGWL-WSSSGT-------GVCVFDS- 265 (305)
T ss_dssp SEEEEEECCC---CCCEEEEEEEETTE-EEEEEEEECC----SSSCCCSEEECTTSCE-EECCSS-------EEEEECT-
T ss_pred CEEEEEecCCcCCCCCEEEEEEecCCC-ccCCeEEEEC----CCCCCCeEEECCCCCE-EEecCC-------cEEEECC-
Confidence 988877654 689999987654 2211111000 1123456889999994 444432 4888987
Q ss_pred CCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEE
Q psy7108 240 KGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYS 278 (703)
Q Consensus 240 ~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd 278 (703)
.++....+..+. .+.+++|+|+++.|..++.+++..++
T Consensus 266 ~g~~~~~~~~~~-~~~~~~f~~d~~~L~it~~~~l~~~~ 303 (305)
T 3dr2_A 266 DGQLLGHIPTPG-TASNCTFDQAQQRLFITGGPCLWMLP 303 (305)
T ss_dssp TSCEEEEEECSS-CCCEEEECTTSCEEEEEETTEEEEEE
T ss_pred CCCEEEEEECCC-ceeEEEEeCCCCEEEEEcCCeEEEEE
Confidence 466665555554 58899999999999888877755444
No 213
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.94 E-value=4e-08 Score=103.57 Aligned_cols=252 Identities=13% Similarity=0.086 Sum_probs=159.5
Q ss_pred eeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecCC------
Q psy7108 29 KKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQLL------ 91 (703)
Q Consensus 29 ~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~~------ 91 (703)
...| .+++.+ .++..-..+ . ++++| ||++++.++ .++.|.+||..+.+....+.-..
T Consensus 62 ~ViD~~t~~v~--~~I~vG~~P-~-va~sp--DG~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~ 135 (386)
T 3sjl_D 62 FVIDGEAGRVI--GMIDGGFLP-N-PVVAD--DGSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLV 135 (386)
T ss_dssp EEEETTTTEEE--EEEEECSSC-E-EEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCB
T ss_pred EEEECCCCeEE--EEEECCCCC-c-EEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCcccccc
Confidence 3444 466766 666654555 4 99999 999887765 36789999999987665553221
Q ss_pred -CcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE
Q psy7108 92 -SDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI 168 (703)
Q Consensus 92 -~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l 168 (703)
.....++|+|||++++++.. ++.|.++|+.+++.+.++.... . ...+....+.+
T Consensus 136 g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v~g----------------------~-~~~~P~g~~~~ 192 (386)
T 3sjl_D 136 GTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDVPD----------------------C-YHIFPTAPDTF 192 (386)
T ss_dssp SCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCS----------------------E-EEEEEEETTEE
T ss_pred CCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEECCC----------------------c-ceeecCCCcee
Confidence 24567999999999988864 6899999999999998885421 1 12233344567
Q ss_pred EEEecCCcEEEEECCC-CceEEEEEeccCCccccccccc-eeeeec-cCCCEEEEEcccCCCCCeeEEECCCCCCCcc--
Q psy7108 169 LAAGQSKYICIYSSRE-GILLKKFTITQNKSLDGINDFI-NRRKMT-EFGNVSLIETRETHEGGNVVLKLPGVKKGDM-- 243 (703)
Q Consensus 169 ~s~s~dg~I~lwD~~~-~~~~~~~~~~~~~~~~~~~~~v-~~~~~s-pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~-- 243 (703)
++.+.||.+.+.++.+ ++...+.. .. .+.....+ ....|. ++|+.++++. ++ .+.+.|..+...
T Consensus 193 ~~~~~DG~~~~v~~~~~g~v~~~~~--~~--~~~~~~~~~~~~~~~~~dG~~~~vs~-~g------~V~v~d~~~~~~~v 261 (386)
T 3sjl_D 193 FMHCRDGSLAKVAFGTEGTPEITHT--EV--FHPEDEFLINHPAYSQKAGRLVWPTY-TG------KIHQIDLSSGDAKF 261 (386)
T ss_dssp EEEETTSCEEEEECCSSSCCEEEEC--CC--CSCTTSCBCSCCEEETTTTEEEEEBT-TS------EEEEEECTTSSCEE
T ss_pred EEECCCCCEEEEECCCCCeEEEeec--ce--eccccccccccceeEcCCCcEEEEeC-CC------EEEEEECCCCccee
Confidence 7778888888888876 55432211 11 11111122 224553 6776655444 32 688888765532
Q ss_pred ceeec---------C-CccceEEEEEcCCCCEEEEEeC--------C--C-EEEEEcCCCceeccee-----eeEEEccc
Q psy7108 244 AARVL---------K-PEVRVFCVKFSPTGQAWVAATT--------E--G-VHIYSLDSGYVFDPFL-----LDISITPQ 297 (703)
Q Consensus 244 ~~~~~---------~-h~~~V~~l~~spdg~~l~s~s~--------D--g-v~iwd~~~~~~~~~~~-----~~~~~spd 297 (703)
..... + .......++++|+++.++.... + . |.++|+.+++.+..+. ..+.+++|
T Consensus 262 ~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~i~vg~~~~~lavs~D 341 (386)
T 3sjl_D 262 LPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDSINVSQD 341 (386)
T ss_dssp CCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECSS
T ss_pred ecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEEEECCCCcceEEECCC
Confidence 21111 0 1123345778999998876642 1 2 8899999999876654 47999999
Q ss_pred hhhhHhhcCCcceEEEEEEecCch
Q psy7108 298 SVKEALADKDYAKALMMSLKLNEQ 321 (703)
Q Consensus 298 ~~~~~l~sg~~~~~l~la~~l~~~ 321 (703)
+...++.+...++.+.+ ++....
T Consensus 342 ~~~~ly~tn~~~~~VsV-iD~~t~ 364 (386)
T 3sjl_D 342 EKPLLYALSTGDKTLYI-HDAESG 364 (386)
T ss_dssp SSCEEEEEETTTTEEEE-EETTTC
T ss_pred CCeEEEEEcCCCCeEEE-EECCCC
Confidence 93234444444566665 665543
No 214
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.91 E-value=5.4e-07 Score=91.62 Aligned_cols=215 Identities=7% Similarity=0.041 Sum_probs=145.9
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-cCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCC
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-QLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESA 123 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~ 123 (703)
.....+.++++++ +|.+.++...++.|.+||.. ++...... .....+.+++++++|+..++...++.|..+|.. +
T Consensus 17 ~~~~~p~~i~~d~--~g~l~v~~~~~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g 92 (300)
T 2qc5_A 17 IPDSGPYGITSSE--DGKVWFTQHKANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-G 92 (300)
T ss_dssp STTCCEEEEEECT--TSCEEEEETTTTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-S
T ss_pred CCCCCcceeeECC--CCCEEEEcCCCCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-C
Confidence 3456789999999 99988887778999999987 43222112 233678999999999877776667899999987 5
Q ss_pred cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108 124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN 203 (703)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~ 203 (703)
+.. .+.... ....+..++++++|+.+++...++.|..+|.. ++.. .+.... ..
T Consensus 93 ~~~-~~~~~~------------------~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~------~~ 145 (300)
T 2qc5_A 93 GFT-EYPLPQ------------------PDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPN------KG 145 (300)
T ss_dssp CEE-EEECSS------------------TTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSS------TT
T ss_pred CeE-EecCCC------------------CCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCC------CC
Confidence 543 222211 01268899999999988877767889999987 5543 332211 12
Q ss_pred ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee-ecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR-VLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~-~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
..+..+++.++|+..++.... ..|..+|. +++.... ...+...+.+++++++|+.+++....+ |.+|+. +
T Consensus 146 ~~~~~i~~d~~g~l~v~~~~~------~~i~~~~~-~g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~ 217 (300)
T 2qc5_A 146 SYPAFITLGSDNALWFTENQN------NSIGRITN-TGKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-T 217 (300)
T ss_dssp CCEEEEEECTTSSEEEEETTT------TEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-T
T ss_pred CCceeEEECCCCCEEEEecCC------CeEEEECC-CCcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-C
Confidence 356789999999965554433 26888887 5543322 123345688999999998777666666 999987 4
Q ss_pred Cceec-------ceeeeEEEccch
Q psy7108 282 GYVFD-------PFLLDISITPQS 298 (703)
Q Consensus 282 ~~~~~-------~~~~~~~~spd~ 298 (703)
+.... .....+++++++
T Consensus 218 g~~~~~~~~~~~~~~~~i~~d~~g 241 (300)
T 2qc5_A 218 GEISEYDIPTPNARPHAITAGKNS 241 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECSTT
T ss_pred CcEEEEECCCCCCCceEEEECCCC
Confidence 43321 112457778877
No 215
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.91 E-value=3.9e-08 Score=104.04 Aligned_cols=144 Identities=8% Similarity=0.042 Sum_probs=111.5
Q ss_pred ccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108 43 LSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 43 l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~ 122 (703)
...+.+ |+.++| ++++|+++ .++.|++||+.+.........+...+.++.+.+. .+++++.||.|.+||+.+
T Consensus 84 ~~~lp~-V~~l~f----d~~~L~v~-~~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p--~~av~~~dG~L~v~dl~~ 155 (388)
T 1xip_A 84 EKEIPD-VIFVCF----HGDQVLVS-TRNALYSLDLEELSEFRTVTSFEKPVFQLKNVNN--TLVILNSVNDLSALDLRT 155 (388)
T ss_dssp EEECTT-EEEEEE----ETTEEEEE-ESSEEEEEESSSTTCEEEEEECSSCEEEEEECSS--EEEEEETTSEEEEEETTT
T ss_pred EeeCCC-eeEEEE----CCCEEEEE-cCCcEEEEEchhhhccCccceeecceeeEEecCC--CEEEEECCCCEEEEEccC
Confidence 335667 999999 46888888 8899999999877666666678888988887754 388899999999999998
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce--EEEEEeccCCccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL--LKKFTITQNKSLD 200 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~--~~~~~~~~~~~~~ 200 (703)
+.... + .. .|+|++|||+| ++.|..||++++|+...+.. .+++..+.. +.
T Consensus 156 ~~~~~-~---~~--------------------~Vs~v~WSpkG--~~vg~~dg~i~~~~~~~~~~~~k~~I~~Pp~--~~ 207 (388)
T 1xip_A 156 KSTKQ-L---AQ--------------------NVTSFDVTNSQ--LAVLLKDRSFQSFAWRNGEMEKQFEFSLPSE--LE 207 (388)
T ss_dssp CCEEE-E---EE--------------------SEEEEEECSSE--EEEEETTSCEEEEEEETTEEEEEEEECCCHH--HH
T ss_pred Ccccc-c---cC--------------------CceEEEEcCCc--eEEEEcCCcEEEEcCCCccccccceecCCcc--cc
Confidence 87643 1 11 69999999999 67899999999999987775 555532221 11
Q ss_pred ---cccccceeeeeccCCCEEEEEc
Q psy7108 201 ---GINDFINRRKMTEFGNVSLIET 222 (703)
Q Consensus 201 ---~~~~~v~~~~~spdg~~l~~~~ 222 (703)
++...|.++.|.+++.++++-.
T Consensus 208 ~~~~~~~~V~sI~wl~~~~flv~y~ 232 (388)
T 1xip_A 208 ELPVEEYSPLSVTILSPQDFLAVFG 232 (388)
T ss_dssp TSCTTTSEEEEEEESSSSEEEEEEE
T ss_pred cccCCCeeEEEEEEecCCeEEEEEc
Confidence 2456899999999999877643
No 216
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.91 E-value=3.2e-07 Score=95.47 Aligned_cols=200 Identities=14% Similarity=0.094 Sum_probs=126.3
Q ss_pred eeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecC-----CCcEEEEEEecCC
Q psy7108 29 KKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQL-----LSDALCVAYKPDG 103 (703)
Q Consensus 29 ~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-----~~~V~~v~~spdg 103 (703)
..++..+... ..+. +...+.+++|+| +|+++++. .+ .|.+||..+++. ..+... ...+.+++++|+|
T Consensus 74 ~~~d~~~~~~--~~~~-~~~~v~~i~~~~--dg~l~v~~-~~-gl~~~d~~~g~~-~~~~~~~~~~~~~~~~~i~~d~~G 145 (326)
T 2ghs_A 74 HELHLASGRK--TVHA-LPFMGSALAKIS--DSKQLIAS-DD-GLFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSG 145 (326)
T ss_dssp EEEETTTTEE--EEEE-CSSCEEEEEEEE--TTEEEEEE-TT-EEEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTS
T ss_pred EEEECCCCcE--EEEE-CCCcceEEEEeC--CCeEEEEE-CC-CEEEEECCCCcE-EEEeeCCCCCCCCCCCCEEECCCC
Confidence 3445444333 3333 346799999999 88877765 44 489999877753 233222 2358899999999
Q ss_pred CEEEEEEC------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCc
Q psy7108 104 TEIVVATL------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKY 176 (703)
Q Consensus 104 ~~las~s~------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~ 176 (703)
+.+++... .+.|..++ +++...... ... ....++|+||++.++.+ +.++.
T Consensus 146 ~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~-~~~--------------------~~~~i~~s~dg~~lyv~~~~~~~ 202 (326)
T 2ghs_A 146 ALWIGTMGRKAETGAGSIYHVA--KGKVTKLFA-DIS--------------------IPNSICFSPDGTTGYFVDTKVNR 202 (326)
T ss_dssp CEEEEEEETTCCTTCEEEEEEE--TTEEEEEEE-EES--------------------SEEEEEECTTSCEEEEEETTTCE
T ss_pred CEEEEeCCCcCCCCceEEEEEe--CCcEEEeeC-CCc--------------------ccCCeEEcCCCCEEEEEECCCCE
Confidence 97665432 24566666 454332222 111 46789999999877655 45688
Q ss_pred EEEEECC--CC-ceE--EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc
Q psy7108 177 ICIYSSR--EG-ILL--KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE 251 (703)
Q Consensus 177 I~lwD~~--~~-~~~--~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~ 251 (703)
|.+||+. ++ ... ..+.... ........++++++|...++.... ..|..||. +++....+..+.
T Consensus 203 I~~~d~~~~~Gl~~~~~~~~~~~~-----~~~~~p~gi~~d~~G~lwva~~~~------~~v~~~d~-~g~~~~~i~~~~ 270 (326)
T 2ghs_A 203 LMRVPLDARTGLPTGKAEVFIDST-----GIKGGMDGSVCDAEGHIWNARWGE------GAVDRYDT-DGNHIARYEVPG 270 (326)
T ss_dssp EEEEEBCTTTCCBSSCCEEEEECT-----TSSSEEEEEEECTTSCEEEEEETT------TEEEEECT-TCCEEEEEECSC
T ss_pred EEEEEcccccCCcccCceEEEECC-----CCCCCCCeeEECCCCCEEEEEeCC------CEEEEECC-CCCEEEEEECCC
Confidence 9999986 55 321 2221110 111245678999999866654332 26888988 566666666666
Q ss_pred cceEEEEEc-CCCCEEEEEeC
Q psy7108 252 VRVFCVKFS-PTGQAWVAATT 271 (703)
Q Consensus 252 ~~V~~l~~s-pdg~~l~s~s~ 271 (703)
..+.+++|+ |+++.|+.++.
T Consensus 271 ~~~~~~af~g~d~~~L~vt~~ 291 (326)
T 2ghs_A 271 KQTTCPAFIGPDASRLLVTSA 291 (326)
T ss_dssp SBEEEEEEESTTSCEEEEEEB
T ss_pred CCcEEEEEecCCCCEEEEEec
Confidence 679999998 89887754443
No 217
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.90 E-value=7.1e-08 Score=103.50 Aligned_cols=252 Identities=11% Similarity=0.063 Sum_probs=158.1
Q ss_pred eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC-------C
Q psy7108 30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL-------L 91 (703)
Q Consensus 30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~-------~ 91 (703)
+.| .+++.+ .++..-..+ .++++| |+++|+.+. .++.|.++|..+.+....+.-. .
T Consensus 103 VID~~t~~vv--~~I~vG~~P--gia~Sp--Dgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 103 VIDGSTGRIL--GMTDGGFLP--HPVAAE--DGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEETTTTEEE--EEEEECSSC--EEEECT--TSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred EEECCCCEEE--EEEECCCCC--ceEECC--CCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 344 466766 666544556 899999 999888775 4678999999988765554321 2
Q ss_pred CcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeccccC----CCCC------CCCccchhhc----------
Q psy7108 92 SDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGSVEARRDL----DSGR------LDTDLVTREQ---------- 149 (703)
Q Consensus 92 ~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~----~~~~------~~~~~~~~~~---------- 149 (703)
.....++|+|||++++++.. ++.|.+.|+.+++.+..+...... ...+ ..........
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~p~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~ 256 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIFPASPTVFYMNCRDGSLARVDFADGETKVTNT 256 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEEEEETTEEEEEETTSSEEEEECCTTCCEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeeccCCCcEEEEEcCCCCEEEEECCCCcEEEEee
Confidence 34567899999999998874 578999999999988777642100 0000 0000000000
Q ss_pred ---ccCCcc-EEEEEEcCCCCEEEEEecCCcEEEEECCCCceE--EEEEeccCCc-ccc-ccccceeeeeccCCCEEEEE
Q psy7108 150 ---SLKAKA-VSTVCYSADGSCILAAGQSKYICIYSSREGILL--KKFTITQNKS-LDG-INDFINRRKMTEFGNVSLIE 221 (703)
Q Consensus 150 ---~~~~~~-V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~--~~~~~~~~~~-~~~-~~~~v~~~~~spdg~~l~~~ 221 (703)
.....+ ...+.+++++..++..+..+.+.+.|+...... ..+....... ..+ .......++++|+++.+++.
T Consensus 257 ~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa 336 (426)
T 3c75_H 257 EVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPIEALTEAERADDWRPGGWQQTAYHRQSDRIYLL 336 (426)
T ss_dssp CCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCEESSCTTTGGGTEEECSSSCEEEEGGGTEEEEE
T ss_pred eeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeeeeeccccccccccccCCceeeEEcCCCCEEEEE
Confidence 000000 012356777777777677788888888655422 1121110000 000 01122347899999988876
Q ss_pred cccCC----CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCC-EEEEEeC-CC-EEEEEcCCCceecce
Q psy7108 222 TRETH----EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQ-AWVAATT-EG-VHIYSLDSGYVFDPF 288 (703)
Q Consensus 222 ~~~~~----~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~-~l~s~s~-Dg-v~iwd~~~~~~~~~~ 288 (703)
...+. ......|.+.|..+.+.+.++... ...++++|+|||+ .++++.. ++ |.|+|+.+++....+
T Consensus 337 ~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg-~~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 337 VDQRDEWKHKAASRFVVVLNAETGERINKIELG-HEIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EEECCTTCTTSCEEEEEEEETTTCCEEEEEEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred ecccccccccCCCCEEEEEECCCCeEEEEEECC-CCcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 54221 112357999999999888777532 2588999999999 8887774 66 999999999887654
No 218
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.88 E-value=2.2e-07 Score=100.08 Aligned_cols=224 Identities=11% Similarity=0.095 Sum_probs=136.9
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEE---ec-CCCcEEEEEEec
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHET---IQ-LLSDALCVAYKP 101 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~---~~-~~~~V~~v~~sp 101 (703)
++.+|..+..+ ..+........ ++|+| +++.|++++.++ .|.+|+..++...... .. ....+.+++++|
T Consensus 154 I~~id~~~g~~--~~~~~~~~~~~-ia~~~--~g~~l~~~d~~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p 228 (409)
T 3hrp_A 154 VRLISVDDNKV--TTVHPGFKGGK-PAVTK--DKQRVYSIGWEGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDE 228 (409)
T ss_dssp EEEEETTTTEE--EEEEETCCBCB-CEECT--TSSEEEEEBSSTTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECT
T ss_pred EEEEECCCCEE--EEeeccCCCCc-eeEec--CCCcEEEEecCCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeC
Confidence 56677654433 33322223333 99999 999999888766 6888887655432222 12 445678899999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC-CCEEEEEecCCcEEEE
Q psy7108 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD-GSCILAAGQSKYICIY 180 (703)
Q Consensus 102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd-g~~l~s~s~dg~I~lw 180 (703)
++..|+++..++.|+.||..++... .+..... ... ....+...++|+|+ +.++++-..++.|+.|
T Consensus 229 ~~g~lyv~d~~~~I~~~d~~~~~~~-~~~~~~~-~g~------------~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~ 294 (409)
T 3hrp_A 229 TEEWLYFVDSNKNFGRFNVKTQEVT-LIKQLEL-SGS------------LGTNPGPYLIYYFVDSNFYMSDQNLSSVYKI 294 (409)
T ss_dssp TSSEEEEECTTCEEEEEETTTCCEE-EEEECCC-CSC------------CCCSSCCEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCCeEEEEECCCcEEEEECCCCCEE-EEecccc-cCC------------CCCCccccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 6666666777889999999877632 2211100 000 00001128999995 5555555667889999
Q ss_pred ECCCCceEEEEEeccC--Cccc-----cccccceeeeeccCCCEEEEEc-ccCCCCCeeEEECCCCCCCccceeecCC--
Q psy7108 181 SSREGILLKKFTITQN--KSLD-----GINDFINRRKMTEFGNVSLIET-RETHEGGNVVLKLPGVKKGDMAARVLKP-- 250 (703)
Q Consensus 181 D~~~~~~~~~~~~~~~--~~~~-----~~~~~v~~~~~spdg~~l~~~~-~~~~~~~~~~i~iwd~~~~~~~~~~~~h-- 250 (703)
|.... ...+.+... ...+ ........++++++|+.+++.. .. ..|+.||..++... .+.++
T Consensus 295 ~~~g~--~~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~------~~I~~~~~~~G~v~-~~~g~~~ 365 (409)
T 3hrp_A 295 TPDGE--CEWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKG------YCLRKLDILDGYVS-TVAGQVD 365 (409)
T ss_dssp CTTCC--EEEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTT------CEEEEEETTTTEEE-EEEECTT
T ss_pred ecCCC--EEEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCC------CEEEEEECCCCEEE-EEeCCCC
Confidence 97644 333433320 0001 1123467899999999666654 33 47999987666532 22222
Q ss_pred -------------ccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108 251 -------------EVRVFCVKFSPTGQAWVAATTEG-VHIYSL 279 (703)
Q Consensus 251 -------------~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~ 279 (703)
-....+++++|+|..+++-..++ |+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 23588999999987767666666 777664
No 219
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.84 E-value=1e-07 Score=100.11 Aligned_cols=214 Identities=7% Similarity=0.031 Sum_probs=135.7
Q ss_pred cCeEEEEEcCCCCCCEEEEEe--CCCcEEEEEcCCCceeEEEe-------cCCCcEEEEEEecCCCEEEEEEC-----CC
Q psy7108 48 GPVSCIEFSPVLSSTGMVSAS--WDKTVKLWNAVETDTQHETI-------QLLSDALCVAYKPDGTEIVVATL-----DG 113 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs--~Dg~V~iWd~~~~~~~~~~~-------~~~~~V~~v~~spdg~~las~s~-----dg 113 (703)
.....++++| +|+.+++.. .++.++||.+.++ ...... .+-..+.+++++++|+++++-.. ++
T Consensus 17 ~~p~~va~~~--~g~~~v~~~~~~~~~~~l~~~~~g-~~~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~ 93 (343)
T 2qe8_A 17 LAPGNITLTP--DGRLFLSLHQFYQPEMQVAELTQD-GLIPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVP 93 (343)
T ss_dssp SCEEEEEECT--TSCEEEEECGGGCCSCSEEEEETT-EEEESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCC
T ss_pred CCcceEEECC--CCCEEEEeCCCCCCceEEEEECCC-CeecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCC
Confidence 6789999999 999998874 2343667776533 332111 13457899999999876665433 57
Q ss_pred eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEE-EEEe---cCCcEEEEECCCCceEE
Q psy7108 114 QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCI-LAAG---QSKYICIYSSREGILLK 189 (703)
Q Consensus 114 ~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l-~s~s---~dg~I~lwD~~~~~~~~ 189 (703)
.|.+||+.+++.+..+...... ..+...+..++++|++..+ ++.. .++.|.+||+.+++..+
T Consensus 94 ~i~~~d~~tg~~~~~~~~~~~~--------------~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r 159 (343)
T 2qe8_A 94 KLVAWDTLNNQLSRVIYLPPPI--------------TLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAAR 159 (343)
T ss_dssp EEEEEETTTTEEEEEEECCTTT--------------SCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEE
T ss_pred eEEEEECCCCeEEEEEECChhh--------------cccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEE
Confidence 8999999999877777543210 0112246789999865555 4444 57889999999887766
Q ss_pred EEEeccCC-------cccc--------------ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC---CC----
Q psy7108 190 KFTITQNK-------SLDG--------------INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK---KG---- 241 (703)
Q Consensus 190 ~~~~~~~~-------~~~~--------------~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~---~~---- 241 (703)
.+..+... ..++ ....++.++++|+|+.++++...+ ..+..++.. .+
T Consensus 160 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~-----~~l~~~~~~~~~~~~~~~ 234 (343)
T 2qe8_A 160 VLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHS-----TSMYRIKSADLSNLQLTD 234 (343)
T ss_dssp ECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSC-----SEEEEEEHHHHTCTTCCH
T ss_pred EecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCC-----CeEEEEEHHHhcCCCCCh
Confidence 55332110 0111 112357899999999888776543 234333321 11
Q ss_pred -ccce--eecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCc
Q psy7108 242 -DMAA--RVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGY 283 (703)
Q Consensus 242 -~~~~--~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~ 283 (703)
+... ...++......++++++|+.+++...++ |.+|+..+++
T Consensus 235 ~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~~G~ 280 (343)
T 2qe8_A 235 AELGSKIERYSEKPICDGISIDKDHNIYVGDLAHSAIGVITSADRA 280 (343)
T ss_dssp HHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGGTEEEEEETTTTE
T ss_pred hhhhcceEecccCCCCceEEECCCCCEEEEccCCCeEEEEECCCCC
Confidence 0000 1112233466799999999888888777 9999985554
No 220
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.82 E-value=1.1e-09 Score=116.64 Aligned_cols=185 Identities=10% Similarity=0.094 Sum_probs=103.7
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108 60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGR 139 (703)
Q Consensus 60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~ 139 (703)
++..+++++.||.|+.||..+++....... +.+.+..+..++..+++++.|+.|+.||..+|+.+..+..+..
T Consensus 8 ~~~~v~~gs~dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~----- 80 (369)
T 2hz6_A 8 PETLLFVSTLDGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIP----- 80 (369)
T ss_dssp CTTEEEEEETTSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECSCCHH-----
T ss_pred eCCEEEEEcCCCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeeeccCc-----
Confidence 578899999999999999999977665544 5566666667787888888999999999998887655433210
Q ss_pred CCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEE
Q psy7108 140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSL 219 (703)
Q Consensus 140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~ 219 (703)
. .....+ ++. ++..+++++.|+.++.||.++|+.+.++..+. ...++|++..++
T Consensus 81 --------~-~~~~sp----~~~-~~~~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------~~~~~p~~~~v~ 134 (369)
T 2hz6_A 81 --------E-LVQASP----CRS-SDGILYMGKKQDIWYVIDLLTGEKQQTLSSAF------------ADSLSPSTSLLY 134 (369)
T ss_dssp --------H-HHTTCS----CC------CCCCEEEEEEEEECCC----------------------------------EE
T ss_pred --------c-ccccCc----eEe-cCCEEEEEeCCCEEEEEECCCCcEEEEecCCC------------cccccccCCEEE
Confidence 0 000001 111 34567788889999999999998877665322 123456777777
Q ss_pred EEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC---CEEEEEeCCC-EEEEEcCCCcee
Q psy7108 220 IETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG---QAWVAATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 220 ~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg---~~l~s~s~Dg-v~iwd~~~~~~~ 285 (703)
+++.+ ..++.||.++|+.+.....+. ....+++++. ..+++++.|| +..||..+|+..
T Consensus 135 ~~~~d------g~v~a~d~~tG~~~W~~~~~~--~~~~~~~~~~~~~~~v~~~~~dg~v~a~d~~tG~~~ 196 (369)
T 2hz6_A 135 LGRTE------YTITMYDTKTRELRWNATYFD--YAASLPEDDVDYKMSHFVSNGDGLVVTVDSESGDVL 196 (369)
T ss_dssp EEEEE------EEEECCCSSSSSCCCEEEEEE--ECCBCCCCCTTCCCCEEEEETSCEEEEECTTTCCEE
T ss_pred EEecC------CEEEEEECCCCCEEEeEeccc--ccCccccCCccccceEEEECCCCEEEEEECCCCcEE
Confidence 76654 389999999998765543211 1223334432 5677788889 999999998764
No 221
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.75 E-value=1.2e-07 Score=99.85 Aligned_cols=244 Identities=9% Similarity=-0.067 Sum_probs=145.7
Q ss_pred eec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEe----------CCCcEEEEEcCCCceeEEEecC-------C
Q psy7108 30 KGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSAS----------WDKTVKLWNAVETDTQHETIQL-------L 91 (703)
Q Consensus 30 ~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs----------~Dg~V~iWd~~~~~~~~~~~~~-------~ 91 (703)
..| .+++.+ .++.....+ .+.++| |+++++.+. .+++|.+||..+.+....+.-. .
T Consensus 50 vID~~t~~v~--~~i~vG~~P--~i~~sp--Dg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~I~v~~~~~~~~g 123 (368)
T 1mda_H 50 VSCAGCGVTL--GHSLGAFLS--LAVAGH--SGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIADIELPDAPRFSVG 123 (368)
T ss_dssp EEETTTTEEE--EEEEECTTC--EEEECT--TSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEEEEETTSCSCCBS
T ss_pred EEECCCCeEE--EEEeCCCCC--ceEECC--CCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEEEECCCccccccC
Confidence 445 467777 666554556 799999 999888886 3688999999999776665432 1
Q ss_pred CcEEEEEEecCCCEEEEEEC--CCeEEE--EEcCCCcEEEEEecccc----------CCCCCCCC--------------c
Q psy7108 92 SDALCVAYKPDGTEIVVATL--DGQLIM--FDVESAAQVGSVEARRD----------LDSGRLDT--------------D 143 (703)
Q Consensus 92 ~~V~~v~~spdg~~las~s~--dg~I~v--wd~~~~~~~~~~~~~~~----------~~~~~~~~--------------~ 143 (703)
.....++++|||++++++.. +..|.+ +|+.+ +..+..... +....... .
T Consensus 124 ~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p~g~~~~~~~~~dg~~~~vd~~~~~~~~~ 200 (368)
T 1mda_H 124 PRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHPGAAATHYLGSCPASLAASDLAAAPAAAG 200 (368)
T ss_dssp CCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEEEETTEEECCCCTTSCEEEECCSSCCCCE
T ss_pred CCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEccCCCeEEEEEcCCCCEEEEECccccccCC
Confidence 34568999999999998875 457888 98876 333321100 00000000 0
Q ss_pred cch----hhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCc--eEEEEEeccCC-cccc-ccccceeeeeccCC
Q psy7108 144 LVT----REQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGI--LLKKFTITQNK-SLDG-INDFINRRKMTEFG 215 (703)
Q Consensus 144 ~~~----~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~--~~~~~~~~~~~-~~~~-~~~~v~~~~~spdg 215 (703)
... ........+. + ++++..++..+. +.+.+.|+.+.. .+..+...... ...+ .......++++||+
T Consensus 201 ~v~~~~t~~i~vg~~P~---~-~~~~~~~~~vs~-~~V~viD~~~~~~~v~~~~~~~~~~~~~~~~~p~g~~~v~~s~dg 275 (368)
T 1mda_H 201 IVGAQCTGAQNCSSQAA---Q-ANYPGMLVWAVA-SSILQGDIPAAGATMKAAIDGNESGRKADNFRSAGFQMVAKLKNT 275 (368)
T ss_dssp ECCCCSCTTSCBCSCCE---E-ETTTTEEEECBS-SCCEEEECCSSCCEEECCCCSSCTHHHHTTEEECSSSCEEEETTT
T ss_pred eEEEEeeeeeeCCCCcc---c-cccCCEEEEEcC-CEEEEEECCCCcceEEEEEEeccccccccccccCcceeeEEcCCC
Confidence 000 0000011222 2 555666666556 889999986542 22222111000 0000 00112236899999
Q ss_pred CEEEEEcc-c-CC-CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE-EEEe-CCC-EEEEEcCCCceecce
Q psy7108 216 NVSLIETR-E-TH-EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW-VAAT-TEG-VHIYSLDSGYVFDPF 288 (703)
Q Consensus 216 ~~l~~~~~-~-~~-~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l-~s~s-~Dg-v~iwd~~~~~~~~~~ 288 (703)
+.++++.. . +. ......+.++|..+++.+.++.... ...+++|+|||+.+ ++.. .++ |.++|+.+++.+..+
T Consensus 276 ~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~-~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I 353 (368)
T 1mda_H 276 DGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGH-DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSV 353 (368)
T ss_dssp TEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEE-EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEEC
T ss_pred CEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCC-CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEE
Confidence 98887643 1 10 0000135599999998777665433 58899999999854 5555 467 999999999887554
No 222
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.73 E-value=5.5e-07 Score=96.54 Aligned_cols=243 Identities=7% Similarity=-0.041 Sum_probs=146.8
Q ss_pred CCCEEEEEeC-C----CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCCeEEEEEcCCCc
Q psy7108 60 SSTGMVSASW-D----KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDGQLIMFDVESAA 124 (703)
Q Consensus 60 dg~~L~sgs~-D----g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg~I~vwd~~~~~ 124 (703)
+++.++.+.. + ++|.+.|..+.+.+..+.....+ .++++|||+.++++. .++.|.++|..+++
T Consensus 83 ~~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~ 160 (426)
T 3c75_H 83 DARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFL 160 (426)
T ss_dssp CTTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCC
T ss_pred CCCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCc
Confidence 6676666544 3 69999999998766555544444 899999999888776 36789999999999
Q ss_pred EEEEEecc--ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCccc
Q psy7108 125 QVGSVEAR--RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 125 ~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
.+..+.-. .... .......++++|||++++++.. ++.|.+.|+.+++.+.++.........
T Consensus 161 vv~~I~v~g~~r~~---------------~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v~g~~~~~ 225 (426)
T 3c75_H 161 PIADIELPDAPRFL---------------VGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDVPDCYHIF 225 (426)
T ss_dssp EEEEEEETTCCCCC---------------BSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEECCSEEEEE
T ss_pred EEEEEECCCccccc---------------cCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEcCCceeec
Confidence 98887532 1000 0012245789999999999874 578999999999988887653210000
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCC-------------------------------eeEEECCCCCCCccc--eee
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGG-------------------------------NVVLKLPGVKKGDMA--ARV 247 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~-------------------------------~~~i~iwd~~~~~~~--~~~ 247 (703)
. ...-..+.++++|+.+++....+.... ...+.+.|....... ...
T Consensus 226 p-~g~~~~v~~~~dG~~~~V~~~~~~v~~~~~~~~~v~~~p~~~~~~~~~dg~~~~~~s~~g~V~ViD~~~~~~~v~~~~ 304 (426)
T 3c75_H 226 P-ASPTVFYMNCRDGSLARVDFADGETKVTNTEVFHTEDELLINHPAFSLRSGRLVWPTYTGKIFQADLTAEGATFRAPI 304 (426)
T ss_dssp E-EETTEEEEEETTSSEEEEECCTTCCEEEECCCCSCTTSCBCSCCEECTTTCEEEEEBTTSEEEEEEECSSCEEECCCE
T ss_pred c-CCCcEEEEEcCCCCEEEEECCCCcEEEEeeeeeccCCCceeeEeeecCCCCEEEEEeCCCcEEEEeccCCceEEeeee
Confidence 0 001112456666666655542210000 012333332211100 000
Q ss_pred c---C-------CccceEEEEEcCCCCEEEEEeC----------CC-EEEEEcCCCceeccee-----eeEEEccchhhh
Q psy7108 248 L---K-------PEVRVFCVKFSPTGQAWVAATT----------EG-VHIYSLDSGYVFDPFL-----LDISITPQSVKE 301 (703)
Q Consensus 248 ~---~-------h~~~V~~l~~spdg~~l~s~s~----------Dg-v~iwd~~~~~~~~~~~-----~~~~~spd~~~~ 301 (703)
. . .......++++|+++.++++.. .+ |.++|..+.+.+..+. ..+.|+||+..
T Consensus 305 ~~~~~~~i~~g~~p~g~~~va~s~dg~rlyVa~~~~~~gthk~~s~~VsVID~~T~kvv~~I~vg~~P~gia~spDg~~- 383 (426)
T 3c75_H 305 EALTEAERADDWRPGGWQQTAYHRQSDRIYLLVDQRDEWKHKAASRFVVVLNAETGERINKIELGHEIDSINVSQDAEP- 383 (426)
T ss_dssp ESSCTTTGGGTEEECSSSCEEEEGGGTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEEEEEEEEECEEEECCSSSC-
T ss_pred eeccccccccccccCCceeeEEcCCCCEEEEEecccccccccCCCCEEEEEECCCCeEEEEEECCCCcCeEEEccCCCE-
Confidence 0 0 0011123789999988766532 23 9999999998876654 56899999931
Q ss_pred HhhcCC-cceEEEEEEecCchh
Q psy7108 302 ALADKD-YAKALMMSLKLNEQG 322 (703)
Q Consensus 302 ~l~sg~-~~~~l~la~~l~~~~ 322 (703)
.+.... .++.+.+ +++...+
T Consensus 384 ~lyv~n~~s~~VsV-ID~~t~k 404 (426)
T 3c75_H 384 LLYALSAGTQTLHI-YDAATGE 404 (426)
T ss_dssp EEEEEETTTTEEEE-EETTTCC
T ss_pred EEEEEcCCCCeEEE-EECCCCC
Confidence 333333 4677766 6765543
No 223
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.71 E-value=5.7e-07 Score=103.84 Aligned_cols=197 Identities=11% Similarity=0.061 Sum_probs=125.6
Q ss_pred EEEEEcCCCCCCEEEEEeCCCc-------------EEEEEcCCCcee-EEEec----CCCcEEEEEEecCCCEEEEEEC-
Q psy7108 51 SCIEFSPVLSSTGMVSASWDKT-------------VKLWNAVETDTQ-HETIQ----LLSDALCVAYKPDGTEIVVATL- 111 (703)
Q Consensus 51 ~~l~~sp~~dg~~L~sgs~Dg~-------------V~iWd~~~~~~~-~~~~~----~~~~V~~v~~spdg~~las~s~- 111 (703)
.+++|+ |++.|+.++.+.. |++|++.+.... ..+.. +.....++.|+|||++|+....
T Consensus 178 ~~~~Ws---Dg~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~ 254 (693)
T 3iuj_A 178 SGISWL---GNEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAAN 254 (693)
T ss_dssp CCCEEE---TTTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEES
T ss_pred ccEEEe---CCCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEcc
Confidence 567888 5777887776643 899999776532 22322 2335788999999998865443
Q ss_pred ---CCeEEEEEcCCCc-EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cC---CcEEEEECC
Q psy7108 112 ---DGQLIMFDVESAA-QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QS---KYICIYSSR 183 (703)
Q Consensus 112 ---dg~I~vwd~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~d---g~I~lwD~~ 183 (703)
++.|+++|+.++. ....+..+.. ..... |+++|+.|+..+ .+ +.|..+|+.
T Consensus 255 ~~~~~~i~~~d~~~~~~~~~~l~~~~~--------------------~~~~~-~~~~g~~l~~~t~~~~~~~~l~~~d~~ 313 (693)
T 3iuj_A 255 STSGNRLYVKDLSQENAPLLTVQGDLD--------------------ADVSL-VDNKGSTLYLLTNRDAPNRRLVTVDAA 313 (693)
T ss_dssp SSSCCEEEEEETTSTTCCCEEEECSSS--------------------SCEEE-EEEETTEEEEEECTTCTTCEEEEEETT
T ss_pred CCCCcEEEEEECCCCCCceEEEeCCCC--------------------ceEEE-EeccCCEEEEEECCCCCCCEEEEEeCC
Confidence 2489999998763 3334444332 23333 667776666544 33 579999998
Q ss_pred CCce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcC
Q psy7108 184 EGIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSP 261 (703)
Q Consensus 184 ~~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~sp 261 (703)
++.. .+.+..+.. .+. .|+++++.+++.... ++...|++||+..+............+..+.++|
T Consensus 314 ~~~~~~~~~l~~~~~--------~~~--~~s~~g~~lv~~~~~---~g~~~l~~~d~~g~~~~~l~~p~~~~~~~~~~~~ 380 (693)
T 3iuj_A 314 NPGPAHWRDLIPERQ--------QVL--TVHSGSGYLFAEYMV---DATARVEQFDYEGKRVREVALPGLGSVSGFNGKH 380 (693)
T ss_dssp SCCGGGCEEEECCCS--------SCE--EEEEETTEEEEEEEE---TTEEEEEEECTTSCEEEEECCSSSSEEEECCCCT
T ss_pred CCCccccEEEecCCC--------CEE--EEEEECCEEEEEEEE---CCeeEEEEEECCCCeeEEeecCCCceEEeeecCC
Confidence 7654 234433322 222 899999988877654 2345789999875543322223445677888899
Q ss_pred CCCEEEEEeCC----C-EEEEEcCCCce
Q psy7108 262 TGQAWVAATTE----G-VHIYSLDSGYV 284 (703)
Q Consensus 262 dg~~l~s~s~D----g-v~iwd~~~~~~ 284 (703)
+++.++....+ + +..||+.+++.
T Consensus 381 d~~~l~~~~ss~~tP~~l~~~d~~~g~~ 408 (693)
T 3iuj_A 381 DDPALYFGFENYAQPPTLYRFEPKSGAI 408 (693)
T ss_dssp TCSCEEEEEECSSSCCEEEEECTTTCCE
T ss_pred CCCEEEEEecCCCCCCEEEEEECCCCeE
Confidence 98877544333 4 88888877653
No 224
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.71 E-value=2.6e-06 Score=84.98 Aligned_cols=196 Identities=10% Similarity=0.064 Sum_probs=130.9
Q ss_pred CeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCc
Q psy7108 49 PVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAA 124 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~ 124 (703)
....+.|+| ++.++++.+. ++.|++.|..+++....+.- .......+++. ++.|..+. .++.+.++|..+.+
T Consensus 22 f~~Gl~~~~--dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~--g~~lyv~t~~~~~v~viD~~t~~ 97 (266)
T 2iwa_A 22 FTQGLVYAE--NDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLL--NEKLYQVVWLKNIGFIYDRRTLS 97 (266)
T ss_dssp CEEEEEECS--TTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEE--TTEEEEEETTCSEEEEEETTTTE
T ss_pred CcccEEEeC--CCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEe--CCEEEEEEecCCEEEEEECCCCc
Confidence 368999999 8765565553 57999999999876555432 11122344444 55665554 57899999999999
Q ss_pred EEEEEecc-ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108 125 QVGSVEAR-RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIN 203 (703)
Q Consensus 125 ~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~ 203 (703)
.+.++... .. . ..+++||+.++++..++.|.++|..+.+.+.++........ .
T Consensus 98 v~~~i~~g~~~--------------------g---~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~~p---~ 151 (266)
T 2iwa_A 98 NIKNFTHQMKD--------------------G---WGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNGHR---V 151 (266)
T ss_dssp EEEEEECCSSS--------------------C---CEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETTEE---C
T ss_pred EEEEEECCCCC--------------------e---EEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCCcc---c
Confidence 99888643 11 1 23456788787777788999999999998888774432100 0
Q ss_pred ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-------------ccceEEEEEcCCCCEEEEEe
Q psy7108 204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-------------EVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-------------~~~V~~l~~spdg~~l~s~s 270 (703)
..++.+.+. +|+ +++..... ..|.+-|..+++.+..+.-. ......++|+|+++.+++++
T Consensus 152 ~~~nele~~-dg~-lyvn~~~~-----~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 152 IRLNELEYI-NGE-VWANIWQT-----DCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp CCEEEEEEE-TTE-EEEEETTS-----SEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred ccceeEEEE-CCE-EEEecCCC-----CeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 135567777 664 44444321 37889999999877666532 13568999999998775554
Q ss_pred -CCC-EEEEEcCC
Q psy7108 271 -TEG-VHIYSLDS 281 (703)
Q Consensus 271 -~Dg-v~iwd~~~ 281 (703)
... +.+.++..
T Consensus 225 k~~~~v~~i~l~~ 237 (266)
T 2iwa_A 225 KLWPKLFEIKLHL 237 (266)
T ss_dssp TTCSEEEEEEEEE
T ss_pred CCCCeEEEEEEec
Confidence 444 77777654
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=98.66 E-value=2.2e-06 Score=90.29 Aligned_cols=237 Identities=10% Similarity=0.042 Sum_probs=144.9
Q ss_pred ceeec-cCCCccccccccCC-------CcCeEEEEEcCCCCCCEEEEEeC--CCcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108 28 VKKGD-MAARVLKPEVLSGH-------EGPVSCIEFSPVLSSTGMVSASW--DKTVKLWNAVETDTQHETIQLLSDALCV 97 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH-------~~~V~~l~~sp~~dg~~L~sgs~--Dg~V~iWd~~~~~~~~~~~~~~~~V~~v 97 (703)
+..+| .+++.+ ..+.-. ...-..++++| ||++++.+.. ++.|.++|+.+++....+ ...+. ..
T Consensus 111 VsviD~~t~~v~--~~I~v~~g~r~~~g~~P~~~a~sp--DGk~lyVan~~~~~~VsVID~~t~~vv~tI-~v~g~--~~ 183 (386)
T 3sjl_D 111 VEVFDPVTLLPT--ADIELPDAPRFLVGTYPWMTSLTP--DGKTLLFYQFSPAPAVGVVDLEGKAFKRML-DVPDC--YH 183 (386)
T ss_dssp EEEECTTTCCEE--EEEEETTCCCCCBSCCGGGEEECT--TSSEEEEEECSSSCEEEEEETTTTEEEEEE-ECCSE--EE
T ss_pred EEEEECCCCeEE--EEEECCCccccccCCCCceEEEcC--CCCEEEEEEcCCCCeEEEEECCCCcEEEEE-ECCCc--ce
Confidence 55566 456655 444311 12345689999 9999888763 689999999998655444 33221 22
Q ss_pred EEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEeccccCCCCCCCCccchhhcccCCccE-EEEEE-cCCCCEEEEEecC
Q psy7108 98 AYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAV-STVCY-SADGSCILAAGQS 174 (703)
Q Consensus 98 ~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V-~~i~~-spdg~~l~s~s~d 174 (703)
.+....+.+++.+.||++.+.++.+ ++.........+ .. ..++ ....| .++|++++ .+.+
T Consensus 184 ~~P~g~~~~~~~~~DG~~~~v~~~~~g~v~~~~~~~~~--~~--------------~~~~~~~~~~~~~dG~~~~-vs~~ 246 (386)
T 3sjl_D 184 IFPTAPDTFFMHCRDGSLAKVAFGTEGTPEITHTEVFH--PE--------------DEFLINHPAYSQKAGRLVW-PTYT 246 (386)
T ss_dssp EEEEETTEEEEEETTSCEEEEECCSSSCCEEEECCCCS--CT--------------TSCBCSCCEEETTTTEEEE-EBTT
T ss_pred eecCCCceeEEECCCCCEEEEECCCCCeEEEeecceec--cc--------------cccccccceeEcCCCcEEE-EeCC
Confidence 3333456777888899999999976 554322111110 00 0011 12355 46776555 5557
Q ss_pred CcEEEEECCCCc--eEEEEEeccC-Ccccc-ccccceeeeeccCCCEEEEEcccC----CCCCeeEEECCCCCCCcccee
Q psy7108 175 KYICIYSSREGI--LLKKFTITQN-KSLDG-INDFINRRKMTEFGNVSLIETRET----HEGGNVVLKLPGVKKGDMAAR 246 (703)
Q Consensus 175 g~I~lwD~~~~~--~~~~~~~~~~-~~~~~-~~~~v~~~~~spdg~~l~~~~~~~----~~~~~~~i~iwd~~~~~~~~~ 246 (703)
|.+.+.|+.+.. ....+..... ....+ .......++++++++.+++....+ +.+....|.+.|.++++.+.+
T Consensus 247 g~V~v~d~~~~~~~v~~~~~~~~~~~~~~g~~p~g~q~~a~~~~~~~lyV~~~~~~~~~hk~~~~~V~viD~~t~kv~~~ 326 (386)
T 3sjl_D 247 GKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAK 326 (386)
T ss_dssp SEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEEEEEEEETTTCCEEEE
T ss_pred CEEEEEECCCCcceeecceeccccccccccccCCCcceeeECCCCCeEEEEeccccccccCCCCCEEEEEECCCCeEEEE
Confidence 999999997664 2333321000 00000 012334578899999888865421 111225789999999988777
Q ss_pred ecCCccceEEEEEcCCCC-EEEEEeC-CC-EEEEEcCCCceeccee
Q psy7108 247 VLKPEVRVFCVKFSPTGQ-AWVAATT-EG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 247 ~~~h~~~V~~l~~spdg~-~l~s~s~-Dg-v~iwd~~~~~~~~~~~ 289 (703)
+.-. ..+++++++||++ .|+++.. ++ |.++|..+++.+..+.
T Consensus 327 i~vg-~~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~ 371 (386)
T 3sjl_D 327 FEMG-HEIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 371 (386)
T ss_dssp EEEE-EEECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred EECC-CCcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEec
Confidence 6532 3688999999997 6666544 66 9999999998876654
No 226
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=98.63 E-value=1.1e-09 Score=115.76 Aligned_cols=172 Identities=22% Similarity=0.254 Sum_probs=115.9
Q ss_pred ccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCC
Q psy7108 451 NKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYD 530 (703)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d 530 (703)
.+.++|+.+.+.+++.||++|...+++|+...- .....+|+|++-||...
T Consensus 20 ~~~~~~~~~~~~~~~~dG~~l~~~~~~~~~~~~------------------------------~~~~~~~~vvl~HG~~~ 69 (377)
T 1k8q_A 20 ITYWGYPAEEYEVVTEDGYILGIDRIPYGRKNS------------------------------ENIGRRPVAFLQHGLLA 69 (377)
T ss_dssp HHHTTCCCEEEEEECTTSEEEEEEEECSCSSCC------------------------------TTTTTCCEEEEECCTTC
T ss_pred HHHcCCCceEEEeEcCCCCEEEEEEecCCCCCc------------------------------cccCCCCeEEEECCCCC
Confidence 455677777788888999999888887543210 00114788999999888
Q ss_pred chhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcccccchhhhcccccceeeeeeeeee
Q psy7108 531 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTKDMLEGLYGIYALNIFQVGL 610 (703)
Q Consensus 531 ~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~s~~e~~~ 610 (703)
... .|............+. .-|+.|++.-.++-..+..... +.|. ...+|.+++++++.
T Consensus 70 ~~~--~~~~~~~~~~~a~~l~--~~G~~vi~~D~~G~G~S~~~~~---~~~~--------------~~~~~~~~~~~~~~ 128 (377)
T 1k8q_A 70 SAT--NWISNLPNNSLAFILA--DAGYDVWLGNSRGNTWARRNLY---YSPD--------------SVEFWAFSFDEMAK 128 (377)
T ss_dssp CGG--GGSSSCTTTCHHHHHH--HTTCEEEECCCTTSTTSCEESS---SCTT--------------STTTTCCCHHHHHH
T ss_pred chh--hhhcCCCcccHHHHHH--HCCCCEEEecCCCCCCCCCCCC---CCCC--------------cccccCccHHHHHh
Confidence 766 4433222111111222 3356666655444333221100 0000 01456788899999
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCCCh
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLVTR 673 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~~~ 673 (703)
+|+.+.+++++...+..+++++|||+|+.+++.++..+|+...+|+.+++++|+........+
T Consensus 129 ~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v~~lvl~~~~~~~~~~~~~ 191 (377)
T 1k8q_A 129 YDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAPVATVKYTETL 191 (377)
T ss_dssp THHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTEEEEEEESCCSCCSSCCSG
T ss_pred hhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhhhEEEEeCCchhcccchhH
Confidence 999999999999888889999999999999999999888877789999999998876654444
No 227
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.62 E-value=2.1e-06 Score=90.00 Aligned_cols=220 Identities=9% Similarity=-0.022 Sum_probs=129.7
Q ss_pred CCCcCeEEEEEcCCCCCCEEEEEeC-----CCcEEEEEcCCCceeEEEec------CCCcEEEEEEecCCCEEE-EEE--
Q psy7108 45 GHEGPVSCIEFSPVLSSTGMVSASW-----DKTVKLWNAVETDTQHETIQ------LLSDALCVAYKPDGTEIV-VAT-- 110 (703)
Q Consensus 45 gH~~~V~~l~~sp~~dg~~L~sgs~-----Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~spdg~~la-s~s-- 110 (703)
+|-..+.+++++| +++++++-.. ++.|.+||+.+++......- +...+..++++|++..++ +-.
T Consensus 64 ~~~~~p~gv~~d~--~g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~ 141 (343)
T 2qe8_A 64 ITFDTVLGIKSDG--NGIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAP 141 (343)
T ss_dssp CCCSCEEEEEECS--SSEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCS
T ss_pred cceeEeeEEEEcC--CCcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhcccccccceEEEecCCCEEEEEcCcc
Confidence 4567899999999 8877666543 57899999988754433321 123468899998765554 444
Q ss_pred -CCCeEEEEEcCCCcEEEEEeccccCCCCC--CCCccchh---hccc----CCccEEEEEEcCCCCEEEEEecCC-cEEE
Q psy7108 111 -LDGQLIMFDVESAAQVGSVEARRDLDSGR--LDTDLVTR---EQSL----KAKAVSTVCYSADGSCILAAGQSK-YICI 179 (703)
Q Consensus 111 -~dg~I~vwd~~~~~~~~~~~~~~~~~~~~--~~~~~~~~---~~~~----~~~~V~~i~~spdg~~l~s~s~dg-~I~l 179 (703)
.++.|.+||+.+++..+.+.+|....... ...+.... .... -...+..++|+|||+.|+++..++ .+..
T Consensus 142 ~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~ 221 (343)
T 2qe8_A 142 DDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYR 221 (343)
T ss_dssp GGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEE
T ss_pred CCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccceeEeccCCCEEEEEeCCCCeEEE
Confidence 57899999999998777665532211100 00000000 0000 012468899999999988887665 4555
Q ss_pred EECC---CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceE
Q psy7108 180 YSSR---EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVF 255 (703)
Q Consensus 180 wD~~---~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~ 255 (703)
++.. .+... .-.........+.......++++++|..+++.... ..|.+||..+++........ -..+.
T Consensus 222 ~~~~~~~~~~~~-~~~~~~~~~~~g~~g~pdgia~d~~G~l~va~~~~------~~V~~~d~~~G~~~~~~~~~~~~~p~ 294 (343)
T 2qe8_A 222 IKSADLSNLQLT-DAELGSKIERYSEKPICDGISIDKDHNIYVGDLAH------SAIGVITSADRAYKLLVTDEKLSWTD 294 (343)
T ss_dssp EEHHHHTCTTCC-HHHHHTTCEEEEECCSCSCEEECTTCCEEEEEGGG------TEEEEEETTTTEEEEEEECGGGSCEE
T ss_pred EEHHHhcCCCCC-hhhhhcceEecccCCCCceEEECCCCCEEEEccCC------CeEEEEECCCCCEEEEEECCceecCC
Confidence 5432 11100 00000000000111245678999999877766554 37999998556533222222 34588
Q ss_pred EEEEcCCCCEEEEEeCCC
Q psy7108 256 CVKFSPTGQAWVAATTEG 273 (703)
Q Consensus 256 ~l~~spdg~~l~s~s~Dg 273 (703)
+++|.++|+.+++.+..+
T Consensus 295 ~va~~~~g~l~v~~~~~~ 312 (343)
T 2qe8_A 295 SFNFGSDGYLYFDCNQLH 312 (343)
T ss_dssp EEEECTTSCEEEEECCGG
T ss_pred eeEECCCCcEEEEeCccc
Confidence 999999998777776544
No 228
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.59 E-value=4.2e-06 Score=88.87 Aligned_cols=195 Identities=8% Similarity=0.041 Sum_probs=127.6
Q ss_pred eEEEEEcCCCCCCEEEEEeCC------CcEEEEEcCCCceeEEEecCCC---cEEEEEEecCCCEEEEEE----------
Q psy7108 50 VSCIEFSPVLSSTGMVSASWD------KTVKLWNAVETDTQHETIQLLS---DALCVAYKPDGTEIVVAT---------- 110 (703)
Q Consensus 50 V~~l~~sp~~dg~~L~sgs~D------g~V~iWd~~~~~~~~~~~~~~~---~V~~v~~spdg~~las~s---------- 110 (703)
-..+..+| +| +++++..+ |.+.+.|..+.+.......... --..+.|+|+++.++++.
T Consensus 140 Ph~~~~~p--dG-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g 216 (462)
T 2ece_A 140 LHTVHCGP--DA-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDG 216 (462)
T ss_dssp EEEEEECS--SC-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTC
T ss_pred ccceeECC--Ce-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccc
Confidence 34567889 88 77777655 7899999988865555442222 234688999999888874
Q ss_pred ---------CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE--cCCCCEEEEEe------c
Q psy7108 111 ---------LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SADGSCILAAG------Q 173 (703)
Q Consensus 111 ---------~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spdg~~l~s~s------~ 173 (703)
.+.+|.+||+.+++.+.++..... +.....+.| +|+++++.+++ .
T Consensus 217 ~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~------------------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~L 278 (462)
T 2ece_A 217 LKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEE------------------NRMALELRPLHDPTKLMGFINMVVSLKDL 278 (462)
T ss_dssp CCTTTHHHHSCCEEEEEETTTTEEEEEEESCTT------------------EEEEEEEEECSSTTCCEEEEEEEEETTTC
T ss_pred cchhhhhhccCCEEEEEECCCCcEeeEEecCCC------------------CCccceeEeeECCCCCEEEEEEeeeccCC
Confidence 368999999999888877765311 112344555 99999988876 4
Q ss_pred CCcEEEEECCCCce--EEEEEeccCC---ccc-------cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108 174 SKYICIYSSREGIL--LKKFTITQNK---SLD-------GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG 241 (703)
Q Consensus 174 dg~I~lwD~~~~~~--~~~~~~~~~~---~~~-------~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~ 241 (703)
+++|.+|....++. .+.+...... .+. +.......+.+|+||++++++.... ..|.++|+...
T Consensus 279 ss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~-----d~VavfdV~d~ 353 (462)
T 2ece_A 279 SSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGI-----GEVRQYDISNP 353 (462)
T ss_dssp CEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTT-----TEEEEEECSST
T ss_pred CceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCC-----CEEEEEEecCC
Confidence 56888777655432 2222211110 010 0013567899999999999988653 37888887522
Q ss_pred ---ccceeecCC--------------ccceEEEEEcCCCCEEEEEe
Q psy7108 242 ---DMAARVLKP--------------EVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 242 ---~~~~~~~~h--------------~~~V~~l~~spdg~~l~s~s 270 (703)
+.+..+... .+....++++|||++|+++.
T Consensus 354 ~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 354 FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 333322211 01357899999999998887
No 229
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.57 E-value=4.8e-06 Score=82.18 Aligned_cols=194 Identities=9% Similarity=0.042 Sum_probs=129.9
Q ss_pred ccccCCCcC--eEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeE
Q psy7108 41 EVLSGHEGP--VSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQL 115 (703)
Q Consensus 41 ~~l~gH~~~--V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I 115 (703)
+++ .|... ...+.|+ ++.++.+.+.+| .|+++|+++++..... ............+++..|.... .++.+
T Consensus 35 ~~~-phd~~~ftqGL~~~---~~~LyestG~~g~S~v~~vD~~Tgkv~~~~-~l~~~~FgeGit~~g~~ly~ltw~~~~v 109 (262)
T 3nol_A 35 HSY-PHDTKAFTEGFFYR---NGYFYESTGLNGRSSIRKVDIESGKTLQQI-ELGKRYFGEGISDWKDKIVGLTWKNGLG 109 (262)
T ss_dssp EEE-ECCTTCEEEEEEEE---TTEEEEEEEETTEEEEEEECTTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEE
T ss_pred EEe-cCCCCcccceEEEE---CCEEEEECCCCCCceEEEEECCCCcEEEEE-ecCCccceeEEEEeCCEEEEEEeeCCEE
Confidence 444 35433 4788887 457777777766 8999999999765544 3344554444445566666554 47899
Q ss_pred EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEecc
Q psy7108 116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQ 195 (703)
Q Consensus 116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~ 195 (703)
.++|.++.+.+.++..... . +.+ ++|++.|+.+..++.|.++|..+.+.+.++....
T Consensus 110 ~v~D~~t~~~~~ti~~~~e--------------------G-~gl--t~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~ 166 (262)
T 3nol_A 110 FVWNIRNLRQVRSFNYDGE--------------------G-WGL--THNDQYLIMSDGTPVLRFLDPESLTPVRTITVTA 166 (262)
T ss_dssp EEEETTTCCEEEEEECSSC--------------------C-CCE--EECSSCEEECCSSSEEEEECTTTCSEEEEEECEE
T ss_pred EEEECccCcEEEEEECCCC--------------------c-eEE--ecCCCEEEEECCCCeEEEEcCCCCeEEEEEEecc
Confidence 9999999999998876321 1 233 3567777777667889999999999988887543
Q ss_pred CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC------------ccceEEEEEcCCC
Q psy7108 196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP------------EVRVFCVKFSPTG 263 (703)
Q Consensus 196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h------------~~~V~~l~~spdg 263 (703)
+... ...++.+.+. +|+ +++..... ..|.+.|.++++....+.-. ..-.+.++|+|++
T Consensus 167 ~g~~---~~~lNELe~~-~G~-lyan~w~~-----~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~ 236 (262)
T 3nol_A 167 HGEE---LPELNELEWV-DGE-IFANVWQT-----NKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEH 236 (262)
T ss_dssp TTEE---CCCEEEEEEE-TTE-EEEEETTS-----SEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTT
T ss_pred CCcc---ccccceeEEE-CCE-EEEEEccC-----CeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCC
Confidence 2100 0134456665 665 44444322 37888999999876655431 2346899999999
Q ss_pred CEEEEEeCC
Q psy7108 264 QAWVAATTE 272 (703)
Q Consensus 264 ~~l~s~s~D 272 (703)
+.|.+.+..
T Consensus 237 ~~lfVTGK~ 245 (262)
T 3nol_A 237 HRLFVTGKL 245 (262)
T ss_dssp TEEEEEETT
T ss_pred CEEEEECCC
Confidence 888777743
No 230
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.53 E-value=6.6e-06 Score=81.19 Aligned_cols=185 Identities=9% Similarity=0.068 Sum_probs=126.5
Q ss_pred CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcEEE
Q psy7108 49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQVG 127 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~~~ 127 (703)
-...+.|+. +.++.+.+.+|.|+++|+++++..... ...........++++.|... -.++.+.+||.++.+.+.
T Consensus 56 ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~--l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ 130 (268)
T 3nok_A 56 FTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWME--RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRER 130 (268)
T ss_dssp CEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEE--ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEE
T ss_pred ccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEE--CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEE
Confidence 347888874 677788888999999999999766666 33444443334455555444 458899999999999999
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFIN 207 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~ 207 (703)
++..... . +.++ +|++.|+.+..++.|.++|..+.+.+.++........ -..++
T Consensus 131 ti~~~~e--------------------G-wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~g~~---v~~lN 184 (268)
T 3nok_A 131 TTRYSGE--------------------G-WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLRGQP---VELIN 184 (268)
T ss_dssp EEECSSC--------------------C-CCEE--EETTEEEEECSSSEEEEECTTTCCEEEEEECEETTEE---CCCEE
T ss_pred EEeCCCc--------------------e-eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCCCcc---ccccc
Confidence 9876321 1 2333 5688888877789999999999999888875432111 11345
Q ss_pred eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-------------CccceEEEEEcCCCCEEEEEeC
Q psy7108 208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-------------PEVRVFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------------h~~~V~~l~~spdg~~l~s~s~ 271 (703)
.+.+. +|+ +++..... ..|.+-|.++++.+..+.- ...-.+.++++|+++.|...+.
T Consensus 185 eLe~~-dG~-lyanvw~s-----~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK 254 (268)
T 3nok_A 185 ELECA-NGV-IYANIWHS-----SDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGK 254 (268)
T ss_dssp EEEEE-TTE-EEEEETTC-----SEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEET
T ss_pred ccEEe-CCE-EEEEECCC-----CeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCC
Confidence 56666 665 44444322 2788889999987655442 1235689999998877766653
No 231
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=98.51 E-value=6.1e-06 Score=87.65 Aligned_cols=197 Identities=12% Similarity=0.070 Sum_probs=124.4
Q ss_pred CCCEEE-EEeCCCcEEEEEcCCCc---eeEEEec--------CCCcEEEEEEecCCCEEEEEECC------CeEEEEEcC
Q psy7108 60 SSTGMV-SASWDKTVKLWNAVETD---TQHETIQ--------LLSDALCVAYKPDGTEIVVATLD------GQLIMFDVE 121 (703)
Q Consensus 60 dg~~L~-sgs~Dg~V~iWd~~~~~---~~~~~~~--------~~~~V~~v~~spdg~~las~s~d------g~I~vwd~~ 121 (703)
++++|+ +|..++.|.++|+.+.. .+..... .......+..+|+| .++++..+ +.|.++|.+
T Consensus 94 ~r~~l~v~~l~s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdG-i~Vs~~g~~~g~~~g~v~vlD~~ 172 (462)
T 2ece_A 94 ERRFLIVPGLRSSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDA-IYISALGNEEGEGPGGILMLDHY 172 (462)
T ss_dssp CSCEEEEEBTTTCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSC-EEEEEEEETTSCSCCEEEEECTT
T ss_pred cCCEEEEccCCCCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCe-EEEEcCCCcCCCCCCeEEEEECC
Confidence 666665 55677899999986441 2233331 11245667889999 66666555 789999999
Q ss_pred CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-------------------cCCcEEEEEC
Q psy7108 122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-------------------QSKYICIYSS 182 (703)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-------------------~dg~I~lwD~ 182 (703)
+.+.+.+++..... ...-..+-|+|+++.+++.. .+.+|.+||+
T Consensus 173 T~~v~~~~~~~~~~-----------------~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~ 235 (462)
T 2ece_A 173 SFEPLGKWEIDRGD-----------------QYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDL 235 (462)
T ss_dssp TCCEEEECCSBCTT-----------------CCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEET
T ss_pred CCeEEEEEccCCCC-----------------ccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEEC
Confidence 99999888643210 01234578899999888874 3678999999
Q ss_pred CCCceEEEEEeccCCccccccccceee--eeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceee--cC-------
Q psy7108 183 REGILLKKFTITQNKSLDGINDFINRR--KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARV--LK------- 249 (703)
Q Consensus 183 ~~~~~~~~~~~~~~~~~~~~~~~v~~~--~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~--~~------- 249 (703)
.+++.+.++..... ......+ +++|++++.++++.-+..+....|.+|....++ ..+.+ ..
T Consensus 236 ~~~k~~~tI~vg~~------g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~l 309 (462)
T 2ece_A 236 RKRKRIHSLTLGEE------NRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNL 309 (462)
T ss_dssp TTTEEEEEEESCTT------EEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSC
T ss_pred CCCcEeeEEecCCC------CCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccc
Confidence 99888887764311 0122334 459999988887750000111345444332221 11110 00
Q ss_pred ---------CccceEEEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108 250 ---------PEVRVFCVKFSPTGQAWVAATTEG--VHIYSLD 280 (703)
Q Consensus 250 ---------h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~ 280 (703)
-......+.+||||++|.++.... |.+||+.
T Consensus 310 p~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~ 351 (462)
T 2ece_A 310 PEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDIS 351 (462)
T ss_dssp CGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECS
T ss_pred cccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 013477899999999997777654 9999985
No 232
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.51 E-value=3.7e-05 Score=76.62 Aligned_cols=192 Identities=11% Similarity=0.060 Sum_probs=126.2
Q ss_pred EEEecCCCc--EEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEE
Q psy7108 85 HETIQLLSD--ALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVC 160 (703)
Q Consensus 85 ~~~~~~~~~--V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~ 160 (703)
.....|... ...++|++|+...++.+. ++.|.++|+.+++.+..+.-... .....++
T Consensus 12 v~~~p~~~~~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~-------------------~fgeGi~ 72 (266)
T 2iwa_A 12 LNEFPHDPYAFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDS-------------------YFGEGLT 72 (266)
T ss_dssp EEEEECCTTCCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTT-------------------CCEEEEE
T ss_pred EEEEECCCCCCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCC-------------------cceEEEE
Confidence 344455543 578999998754444443 57999999999999888763221 0223455
Q ss_pred EcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC
Q psy7108 161 YSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK 239 (703)
Q Consensus 161 ~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~ 239 (703)
+. ++.|..+ -.++.+.++|..+.+.+.++... . .. ...+++||+.++++... ..+.+.|..
T Consensus 73 ~~--g~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-~--~~-------g~glt~Dg~~l~vs~gs------~~l~viD~~ 134 (266)
T 2iwa_A 73 LL--NEKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-M--KD-------GWGLATDGKILYGSDGT------SILYEIDPH 134 (266)
T ss_dssp EE--TTEEEEEETTCSEEEEEETTTTEEEEEEECC-S--SS-------CCEEEECSSSEEEECSS------SEEEEECTT
T ss_pred Ee--CCEEEEEEecCCEEEEEECCCCcEEEEEECC-C--CC-------eEEEEECCCEEEEECCC------CeEEEEECC
Confidence 54 4455554 46789999999999999888643 1 11 24477788888876532 389999999
Q ss_pred CCccceeecCCc-----cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------------------eeEEE
Q psy7108 240 KGDMAARVLKPE-----VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------------------LDISI 294 (703)
Q Consensus 240 ~~~~~~~~~~h~-----~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------------------~~~~~ 294 (703)
+.+....+.-.. ..++.+.|. +|+..+....++ |.+.|..+++....+. ..+++
T Consensus 135 t~~v~~~I~Vg~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~ 213 (266)
T 2iwa_A 135 TFKLIKKHNVKYNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAW 213 (266)
T ss_dssp TCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEE
T ss_pred CCcEEEEEEECCCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEE
Confidence 887766655321 236788888 775444444445 9999999998755443 35889
Q ss_pred ccchhhhHhhcCCcceEEEE
Q psy7108 295 TPQSVKEALADKDYAKALMM 314 (703)
Q Consensus 295 spd~~~~~l~sg~~~~~l~l 314 (703)
+|++.+.++..+.+.....+
T Consensus 214 ~~~~~~lfVTgk~~~~v~~i 233 (266)
T 2iwa_A 214 DQENKRIFVTGKLWPKLFEI 233 (266)
T ss_dssp ETTTTEEEEEETTCSEEEEE
T ss_pred cCCCCEEEEECCCCCeEEEE
Confidence 99885544444444444333
No 233
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.49 E-value=4.4e-05 Score=76.51 Aligned_cols=202 Identities=9% Similarity=-0.040 Sum_probs=124.7
Q ss_pred cCeEEEEEcCCCCCCEEEE-EeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCc
Q psy7108 48 GPVSCIEFSPVLSSTGMVS-ASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAA 124 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~s-gs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~ 124 (703)
....+++|+| ++..|+. -..++.|..++..+.. ...... .......++++|++..|+.+. ..+.|.+++++...
T Consensus 36 ~~~~gi~~d~--~~~~ly~~d~~~~~I~~~~~~g~~-~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 112 (267)
T 1npe_A 36 KVIIGLAFDC--VDKVVYWTDISEPSIGRASLHGGE-PTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ 112 (267)
T ss_dssp EEEEEEEEET--TTTEEEEEETTTTEEEEEESSSCC-CEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CcEEEEEEec--CCCEEEEEECCCCEEEEEecCCCC-cEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC
Confidence 4578999999 6655554 4556889999987653 233332 235788999999876666554 46789999987543
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---SKYICIYSSREGILLKKFTITQNKSLDG 201 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---dg~I~lwD~~~~~~~~~~~~~~~~~~~~ 201 (703)
........ ......++++|++..|..+.. .+.|..+++.... ...+... .
T Consensus 113 ~~~~~~~~--------------------~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~-~~~~~~~-~----- 165 (267)
T 1npe_A 113 RRVLFDTG--------------------LVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN-RRILAQD-N----- 165 (267)
T ss_dssp CEEEECSS--------------------CSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC-CEEEECT-T-----
T ss_pred EEEEEECC--------------------CCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC-cEEEEEC-C-----
Confidence 22222111 114678999997666665543 3678888876432 2222211 1
Q ss_pred ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEc
Q psy7108 202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSL 279 (703)
Q Consensus 202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~ 279 (703)
......+++++++..++++.... ..|..+|............ ......++.. +..+..+... + |.+++.
T Consensus 166 -~~~P~gia~d~~~~~lyv~d~~~-----~~I~~~~~~g~~~~~~~~~-~~~P~gi~~d--~~~lyva~~~~~~v~~~d~ 236 (267)
T 1npe_A 166 -LGLPNGLTFDAFSSQLCWVDAGT-----HRAECLNPAQPGRRKVLEG-LQYPFAVTSY--GKNLYYTDWKTNSVIAMDL 236 (267)
T ss_dssp -CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTEEEEEEEEEC-CCSEEEEEEE--TTEEEEEETTTTEEEEEET
T ss_pred -CCCCcEEEEcCCCCEEEEEECCC-----CEEEEEecCCCceEEEecC-CCCceEEEEe--CCEEEEEECCCCeEEEEeC
Confidence 12457899999888777665432 3788888765433222222 2234566653 5566555544 4 999999
Q ss_pred CCCceecce
Q psy7108 280 DSGYVFDPF 288 (703)
Q Consensus 280 ~~~~~~~~~ 288 (703)
.+++....+
T Consensus 237 ~~g~~~~~i 245 (267)
T 1npe_A 237 AISKEMDTF 245 (267)
T ss_dssp TTTEEEEEE
T ss_pred CCCCceEEE
Confidence 888765443
No 234
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.48 E-value=1.9e-06 Score=90.84 Aligned_cols=239 Identities=10% Similarity=0.006 Sum_probs=135.1
Q ss_pred EEEEEeCCC----cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE----------CCCeEEEEEcCCCcEEEE
Q psy7108 63 GMVSASWDK----TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT----------LDGQLIMFDVESAAQVGS 128 (703)
Q Consensus 63 ~L~sgs~Dg----~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s----------~dg~I~vwd~~~~~~~~~ 128 (703)
.+++...++ +|.+.|..+++.+..+.....+ .++++||++.++++. .++.|.+||+.+++.+.+
T Consensus 34 ~yV~~~~~~~~~d~vsvID~~t~~v~~~i~vG~~P--~i~~spDg~~lyVan~~~~r~~~G~~~~~VsviD~~T~~vv~~ 111 (368)
T 1mda_H 34 SHITLPAYFAGTTENWVSCAGCGVTLGHSLGAFLS--LAVAGHSGSDFALASTSFARSAKGKRTDYVEVFDPVTFLPIAD 111 (368)
T ss_dssp EEEEECTTTCSSEEEEEEETTTTEEEEEEEECTTC--EEEECTTSSCEEEEEEEETTTTSSSEEEEEEEECTTTCCEEEE
T ss_pred EEEECCccCCccceEEEEECCCCeEEEEEeCCCCC--ceEECCCCCEEEEEcccccccccCCCCCEEEEEECCCCCEEEE
Confidence 444444455 7889999988766665555555 799999999998886 368899999999999998
Q ss_pred EeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEE--EECCCCceEEEEEeccCCccccccc
Q psy7108 129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICI--YSSREGILLKKFTITQNKSLDGIND 204 (703)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~l--wD~~~~~~~~~~~~~~~~~~~~~~~ 204 (703)
+...... +. ........++++|||++++++.. +..+.+ +|+.+ +.++.......+.. ..
T Consensus 112 I~v~~~~---~~----------~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t---v~~i~v~~~~~~~p-~g 174 (368)
T 1mda_H 112 IELPDAP---RF----------SVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD---DQLTKSASCFHIHP-GA 174 (368)
T ss_dssp EEETTSC---SC----------CBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE---EEEEECSSCCCCEE-EE
T ss_pred EECCCcc---cc----------ccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh---ceEEECCCceEEcc-CC
Confidence 8643100 00 00002346899999999998864 456888 99876 44443211100000 00
Q ss_pred cceeeeeccCCCEEEEEccc-----CCC-------------------CCe------eEEECCCCCCCc--cceeec----
Q psy7108 205 FINRRKMTEFGNVSLIETRE-----THE-------------------GGN------VVLKLPGVKKGD--MAARVL---- 248 (703)
Q Consensus 205 ~v~~~~~spdg~~l~~~~~~-----~~~-------------------~~~------~~i~iwd~~~~~--~~~~~~---- 248 (703)
.-.-++++++|+...+.... +.. ++. ..+.+.|..+.. ....+.
T Consensus 175 ~~~~~~~~~dg~~~~vd~~~~~~~~~~v~~~~t~~i~vg~~P~~~~~~~~~~~vs~~~V~viD~~~~~~~v~~~~~~~~~ 254 (368)
T 1mda_H 175 AATHYLGSCPASLAASDLAAAPAAAGIVGAQCTGAQNCSSQAAQANYPGMLVWAVASSILQGDIPAAGATMKAAIDGNES 254 (368)
T ss_dssp TTEEECCCCTTSCEEEECCSSCCCCEECCCCSCTTSCBCSCCEEETTTTEEEECBSSCCEEEECCSSCCEEECCCCSSCT
T ss_pred CeEEEEEcCCCCEEEEECccccccCCeEEEEeeeeeeCCCCccccccCCEEEEEcCCEEEEEECCCCcceEEEEEEeccc
Confidence 01113344455444433321 000 000 012222322111 000000
Q ss_pred ---CCc---cceEEEEEcCCCCEEEEEeC----------CCEEEEEcCCCceeccee-----eeEEEccchhhhHhhcCC
Q psy7108 249 ---KPE---VRVFCVKFSPTGQAWVAATT----------EGVHIYSLDSGYVFDPFL-----LDISITPQSVKEALADKD 307 (703)
Q Consensus 249 ---~h~---~~V~~l~~spdg~~l~s~s~----------Dgv~iwd~~~~~~~~~~~-----~~~~~spd~~~~~l~sg~ 307 (703)
.+. .....++++||++.+..+.. +++.++|+.+.+.+..+. ..+.++||+...+++...
T Consensus 255 ~~~~~~~~p~g~~~v~~s~dg~~lyV~~~~~~~~~~~~~~~~~ViD~~t~~vv~~i~vg~~p~gi~~s~Dg~~l~va~~~ 334 (368)
T 1mda_H 255 GRKADNFRSAGFQMVAKLKNTDGIMILTVEHSRSCLAAAENTSSVTASVGQTSGPISNGHDSDAIIAAQDGASDNYANSA 334 (368)
T ss_dssp HHHHTTEEECSSSCEEEETTTTEEEEEEEECSSCTTSCEEEEEEEESSSCCEEECCEEEEEECEEEECCSSSCEEEEEET
T ss_pred cccccccccCcceeeEEcCCCCEEEEEeccccCcccccCCCEEEEECCCCeEEEEEECCCCcceEEECCCCCEEEEEccC
Confidence 000 11112689999998875432 347799999998876654 568999998433333332
Q ss_pred cceEEEEEEecCch
Q psy7108 308 YAKALMMSLKLNEQ 321 (703)
Q Consensus 308 ~~~~l~la~~l~~~ 321 (703)
.++.+.+ +++...
T Consensus 335 ~~~~VsV-ID~~t~ 347 (368)
T 1mda_H 335 GTEVLDI-YDAASD 347 (368)
T ss_dssp TTTEEEE-EESSSC
T ss_pred CCCeEEE-EECCCC
Confidence 4677776 666544
No 235
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.46 E-value=2.5e-05 Score=76.42 Aligned_cols=187 Identities=8% Similarity=0.008 Sum_probs=123.6
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCc
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAA 124 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~ 124 (703)
.-...+.|++ +.++.+.+.+| .|+..|+.+++..... ............+++..|... -.++.+.++|.++.+
T Consensus 21 ~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~-~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~ 96 (243)
T 3mbr_X 21 AFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRA-EVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLT 96 (243)
T ss_dssp CCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEE-ECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTE
T ss_pred cccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEE-eCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCc
Confidence 4466899985 56667777654 8999999998655444 333444444344445555544 458899999999999
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGIND 204 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~ 204 (703)
.+.++..... . +.++ +|++.|+.+..++.|.++|..+.+.++++........- .
T Consensus 97 ~~~ti~~~~~--------------------G-wglt--~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g~~~---~ 150 (243)
T 3mbr_X 97 PRARFRYPGE--------------------G-WALT--SDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGGRPL---D 150 (243)
T ss_dssp EEEEEECSSC--------------------C-CEEE--ECSSCEEEECSSSEEEEECTTTCCEEEEEECEETTEEC---C
T ss_pred EEEEEeCCCC--------------------c-eEEe--eCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCCccc---c
Confidence 9998876421 2 3444 56777777777889999999999998888754321110 1
Q ss_pred cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC-------------CccceEEEEEcCCCCEEEEEeC
Q psy7108 205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK-------------PEVRVFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~-------------h~~~V~~l~~spdg~~l~s~s~ 271 (703)
.++.+.+. +|+. ++..... ..|.+.|.++++.+..+.- ...-.+.++++|+++.|...+.
T Consensus 151 ~lNeLe~~-~G~l-yanvw~s-----~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 151 NLNELEWV-NGEL-LANVWLT-----SRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp CEEEEEEE-TTEE-EEEETTT-----TEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred cceeeEEe-CCEE-EEEECCC-----CeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 34445544 5654 4433221 2688889999877655441 1234689999999888876664
No 236
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.42 E-value=2.1e-05 Score=77.52 Aligned_cols=193 Identities=11% Similarity=0.092 Sum_probs=127.9
Q ss_pred eEEEecCCCcE--EEEEEecCCCEEEEEECCC--eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108 84 QHETIQLLSDA--LCVAYKPDGTEIVVATLDG--QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159 (703)
Q Consensus 84 ~~~~~~~~~~V--~~v~~spdg~~las~s~dg--~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i 159 (703)
+.....|.... ..+.|+ ++.+..+.+.+| .|+++|+++++.+..+...... .-..+
T Consensus 33 vv~~~phd~~~ftqGL~~~-~~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~~~-------------------FgeGi 92 (262)
T 3nol_A 33 IVHSYPHDTKAFTEGFFYR-NGYFYESTGLNGRSSIRKVDIESGKTLQQIELGKRY-------------------FGEGI 92 (262)
T ss_dssp EEEEEECCTTCEEEEEEEE-TTEEEEEEEETTEEEEEEECTTTCCEEEEEECCTTC-------------------CEEEE
T ss_pred EEEEecCCCCcccceEEEE-CCEEEEECCCCCCceEEEEECCCCcEEEEEecCCcc-------------------ceeEE
Confidence 34444565543 678998 676667777766 8999999999998887653320 11234
Q ss_pred EEcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108 160 CYSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV 238 (703)
Q Consensus 160 ~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~ 238 (703)
+. +++.|... -.++.+.+||..+.+.+.++.... ....+++|++.++.+... ..|.++|.
T Consensus 93 t~--~g~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~-----------eG~glt~dg~~L~~SdGs------~~i~~iDp 153 (262)
T 3nol_A 93 SD--WKDKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG-----------EGWGLTHNDQYLIMSDGT------PVLRFLDP 153 (262)
T ss_dssp EE--ETTEEEEEESSSSEEEEEETTTCCEEEEEECSS-----------CCCCEEECSSCEEECCSS------SEEEEECT
T ss_pred EE--eCCEEEEEEeeCCEEEEEECccCcEEEEEECCC-----------CceEEecCCCEEEEECCC------CeEEEEcC
Confidence 43 35555554 457899999999999999987532 224555788877776533 37999999
Q ss_pred CCCccceeecCC--c---cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee------------------eeEEE
Q psy7108 239 KKGDMAARVLKP--E---VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL------------------LDISI 294 (703)
Q Consensus 239 ~~~~~~~~~~~h--~---~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~------------------~~~~~ 294 (703)
.+.+....+.-. . ..++.+.|. +|+..+..-.+. |.+.|..+++....+. ..+++
T Consensus 154 ~T~~v~~~I~V~~~g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~ 232 (262)
T 3nol_A 154 ESLTPVRTITVTAHGEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAW 232 (262)
T ss_dssp TTCSEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEE
T ss_pred CCCeEEEEEEeccCCccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEE
Confidence 998877665432 1 335567776 676444443444 9999999988754332 34788
Q ss_pred ccchhhhHhhcCCcceEEEEEE
Q psy7108 295 TPQSVKEALADKDYAKALMMSL 316 (703)
Q Consensus 295 spd~~~~~l~sg~~~~~l~la~ 316 (703)
+|++.+.++..+.+.....+.+
T Consensus 233 dp~~~~lfVTGK~Wp~~~ev~~ 254 (262)
T 3nol_A 233 DKEHHRLFVTGKLWPKVFEITL 254 (262)
T ss_dssp ETTTTEEEEEETTCSEEEEEEE
T ss_pred cCCCCEEEEECCCCCceEEEEE
Confidence 8877555566666666655533
No 237
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=98.35 E-value=4.4e-08 Score=104.04 Aligned_cols=174 Identities=7% Similarity=0.008 Sum_probs=88.7
Q ss_pred ceeec-cCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCC-cEE-EEEEecCCC
Q psy7108 28 VKKGD-MAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLS-DAL-CVAYKPDGT 104 (703)
Q Consensus 28 v~~~d-~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~-~V~-~v~~spdg~ 104 (703)
+..|| .+|+++ ..+.. +++.+..+.+ ++..+++++.||.|+.||..+++.......+.. .+. +..+. ++.
T Consensus 21 v~a~d~~tG~~~--W~~~~--~~~~s~p~~~--~g~~~v~~s~dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~-~~~ 93 (369)
T 2hz6_A 21 LHAVSKRTGSIK--WTLKE--DPVLQVPTHV--EEPAFLPDPNDGSLYTLGSKNNEGLTKLPFTIPELVQASPCRS-SDG 93 (369)
T ss_dssp EEEEETTTCCEE--EEEEC--CCSCCCC-------CCEEECTTTCCEEEC-----CCSEECSCCHHHHHTTCSCC-----
T ss_pred EEEEECCCCCEE--EEecC--CCceecceEc--CCCEEEEeCCCCEEEEEECCCCceeeeeeccCccccccCceEe-cCC
Confidence 33455 588887 56655 4555555666 777888888999999999988765443322111 110 01111 345
Q ss_pred EEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCC
Q psy7108 105 EIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSRE 184 (703)
Q Consensus 105 ~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~ 184 (703)
.+++++.|+.|+.||.++|+.+..+..+. ...++|++..+++++.|+.|+.||.++
T Consensus 94 ~v~~g~~dg~v~a~D~~tG~~~w~~~~~~------------------------~~~~~p~~~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 94 ILYMGKKQDIWYVIDLLTGEKQQTLSSAF------------------------ADSLSPSTSLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp -CCCCEEEEEEEEECCC----------------------------------------------EEEEEEEEEEECCCSSS
T ss_pred EEEEEeCCCEEEEEECCCCcEEEEecCCC------------------------cccccccCCEEEEEecCCEEEEEECCC
Confidence 67788889999999999998876665432 123456788899999999999999999
Q ss_pred CceEEEEEeccCCccccccccceeeeeccCC---CEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108 185 GILLKKFTITQNKSLDGINDFINRRKMTEFG---NVSLIETRETHEGGNVVLKLPGVKKGDMAARVL 248 (703)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg---~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~ 248 (703)
++.+..+.... ....+++++. ..+++++.++ .+..||.++|+.+....
T Consensus 150 G~~~W~~~~~~----------~~~~~~~~~~~~~~~v~~~~~dg------~v~a~d~~tG~~~W~~~ 200 (369)
T 2hz6_A 150 RELRWNATYFD----------YAASLPEDDVDYKMSHFVSNGDG------LVVTVDSESGDVLWIQN 200 (369)
T ss_dssp SSCCCEEEEEE----------ECCBCCCCCTTCCCCEEEEETSC------EEEEECTTTCCEEEEEE
T ss_pred CCEEEeEeccc----------ccCccccCCccccceEEEECCCC------EEEEEECCCCcEEEEec
Confidence 98766554221 1223333331 3344444432 78999998887655443
No 238
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.29 E-value=6.9e-06 Score=90.31 Aligned_cols=185 Identities=7% Similarity=-0.006 Sum_probs=118.2
Q ss_pred cCeEEEEE-c-CCCCCCEEEEEe------------------CCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108 48 GPVSCIEF-S-PVLSSTGMVSAS------------------WDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 48 ~~V~~l~~-s-p~~dg~~L~sgs------------------~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 107 (703)
.....+++ + | ++.+++.++ .++.+.+.|.++.+...++.-.. ....++++|||++++
T Consensus 134 ~~phg~~~~~~p--~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~Vgg-~pd~~~~spdGk~~~ 210 (595)
T 1fwx_A 134 KGIHGLRPQKWP--RSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLVSG-NLDNCDADYEGKWAF 210 (595)
T ss_dssp CSEEEEEECCSS--BCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEESS-CCCCEEECSSSSEEE
T ss_pred CCCcceeeeecC--CCcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEeCC-CccceEECCCCCEEE
Confidence 45778888 5 8 899988884 24578899998875555544323 456788999999999
Q ss_pred EEECCC---------------eEEEEE-----------------------cCC--CcE-EEEEeccccCCCCCCCCccch
Q psy7108 108 VATLDG---------------QLIMFD-----------------------VES--AAQ-VGSVEARRDLDSGRLDTDLVT 146 (703)
Q Consensus 108 s~s~dg---------------~I~vwd-----------------------~~~--~~~-~~~~~~~~~~~~~~~~~~~~~ 146 (703)
+++.+. .|.+.| ..+ ++. +..+...
T Consensus 211 vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg-------------- 276 (595)
T 1fwx_A 211 STSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIA-------------- 276 (595)
T ss_dssp EEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEE--------------
T ss_pred EEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecC--------------
Confidence 888653 244444 333 211 2222211
Q ss_pred hhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCc------------eEEEEEeccCCccccccccceeeeecc
Q psy7108 147 REQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGI------------LLKKFTITQNKSLDGINDFINRRKMTE 213 (703)
Q Consensus 147 ~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~------------~~~~~~~~~~~~~~~~~~~v~~~~~sp 213 (703)
....++.++|||+++++++ .+.+|.++|+.+.+ ...... . ......++|+|
T Consensus 277 -------~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~--v-------G~gP~h~aF~~ 340 (595)
T 1fwx_A 277 -------NNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPE--L-------GLGPLHTAFDG 340 (595)
T ss_dssp -------SSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCB--C-------CSCEEEEEECT
T ss_pred -------CCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcC--C-------CCCcceEEECC
Confidence 1356789999999988765 56789999998652 112111 1 12456789999
Q ss_pred CCCEEEEEcccCCCCCeeEEECCCCCC----------CccceeecCCccc-----eEEEEEcCCCCEEEEEeC
Q psy7108 214 FGNVSLIETRETHEGGNVVLKLPGVKK----------GDMAARVLKPEVR-----VFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 214 dg~~l~~~~~~~~~~~~~~i~iwd~~~----------~~~~~~~~~h~~~-----V~~l~~spdg~~l~s~s~ 271 (703)
+| .++++..-+ ..|..||+.+ .+.+.++..|-.+ -.++.++|||++|+++..
T Consensus 341 dG-~aY~t~~ld-----sqV~kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk 407 (595)
T 1fwx_A 341 RG-NAYTSLFLD-----SQVVKWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSK 407 (595)
T ss_dssp TS-EEEEEETTT-----TEEEEEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEES
T ss_pred CC-eEEEEEecC-----CcEEEEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCC
Confidence 99 655554332 3788899876 3444455444221 122355899999988764
No 239
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=98.26 E-value=2.9e-05 Score=85.31 Aligned_cols=186 Identities=9% Similarity=0.020 Sum_probs=125.8
Q ss_pred CCCEEEEEeC-CCcEEEEEcCCCceeEEE-ecCCCcEEEEEE-e-cCCCEEEEEEC------------------CCeEEE
Q psy7108 60 SSTGMVSASW-DKTVKLWNAVETDTQHET-IQLLSDALCVAY-K-PDGTEIVVATL------------------DGQLIM 117 (703)
Q Consensus 60 dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~-s-pdg~~las~s~------------------dg~I~v 117 (703)
||+++..+.. ++.|.+-|+.+.++...+ .........+++ + |+++++++++. ++.+.+
T Consensus 100 DG~~lfVnd~~~~rVavIdl~t~~~~~ii~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtv 179 (595)
T 1fwx_A 100 DGRFLFMNDKANTRVARVRCDVMKCDAILEIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANYVNVFTA 179 (595)
T ss_dssp EEEEEEEEETTTTEEEEEETTTTEEEEEEECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGEEEEEEE
T ss_pred CCCEEEEEcCCCCEEEEEECCCceEeeEEeCCCCCCCcceeeeecCCCcEEEEecccccccCCCCcccccccccCceEEE
Confidence 5677766654 556999999988654433 223456889998 5 99999988852 457999
Q ss_pred EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC----------------------
Q psy7108 118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK---------------------- 175 (703)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg---------------------- 175 (703)
.|.++.+...++.-... ...++++|||+++++++.+.
T Consensus 180 ID~~t~~v~~qI~Vgg~---------------------pd~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~ 238 (595)
T 1fwx_A 180 VDADKWEVAWQVLVSGN---------------------LDNCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNI 238 (595)
T ss_dssp EETTTTEEEEEEEESSC---------------------CCCEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEH
T ss_pred EECCCCeEEEEEEeCCC---------------------ccceEECCCCCEEEEEecCcccCcchhhccccccceEEEeec
Confidence 99999988877764221 23466788888887776432
Q ss_pred ----------------cEEEEECCC--Cce-EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECC
Q psy7108 176 ----------------YICIYSSRE--GIL-LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLP 236 (703)
Q Consensus 176 ----------------~I~lwD~~~--~~~-~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iw 236 (703)
.|.+.|.++ ++. +..+.... ...++.++|||++++++.... ..|.++
T Consensus 239 ~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~---------~PhGv~~sPDGk~v~V~~~~s-----~~VsVi 304 (595)
T 1fwx_A 239 AEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIAN---------NPHGCNMAPDKKHLCVAGKLS-----PTVTVL 304 (595)
T ss_dssp HHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEES---------SCCCEEECTTSSEEEEECTTS-----SBEEEE
T ss_pred cceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCC---------CceEEEEcCCCCEEEEeCCCC-----CeEEEE
Confidence 366677766 433 34443221 345689999999998877543 378999
Q ss_pred CCCCCcc-----------ceeecCCccceEEEEEcCCCCEE-EEEeCCC-EEEEEcCC
Q psy7108 237 GVKKGDM-----------AARVLKPEVRVFCVKFSPTGQAW-VAATTEG-VHIYSLDS 281 (703)
Q Consensus 237 d~~~~~~-----------~~~~~~h~~~V~~l~~spdg~~l-~s~s~Dg-v~iwd~~~ 281 (703)
|+.+.+. +.....-......++|+|+| .+ ++.--|+ |.+|++++
T Consensus 305 d~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG-~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 305 DVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRG-NAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp EGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTS-EEEEEETTTTEEEEEEHHH
T ss_pred ECcccccccccccCcccceEEEcCCCCCcceEEECCCC-eEEEEEecCCcEEEEEhhH
Confidence 9886531 11111223457899999999 55 4555567 99999876
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.21 E-value=3.8e-05 Score=79.08 Aligned_cols=207 Identities=13% Similarity=0.025 Sum_probs=126.0
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 107 (703)
+..+|.+|+.+ ..+..+.......... +..+..++.++.+..+|.. +............+.++...+++. +.
T Consensus 80 l~~~d~~g~~~--~~~~~~~~~~~~~~~~----~~~l~v~t~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~-l~ 151 (330)
T 3hxj_A 80 VYAINPDGTEK--WRFDTKKAIVSDFTIF----EDILYVTSMDGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGT-IY 151 (330)
T ss_dssp EEEECCCGGGG--GGSCC-----CCEEEE----TTEEEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSC-EE
T ss_pred EEEECCCCcEE--EEEECCCCcccCceEE----CCEEEEEecCCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCE-EE
Confidence 33445566655 4444333333333332 3567778888999999987 655444444444556677777776 55
Q ss_pred EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL 187 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~ 187 (703)
.++.++.|..+|.. ++....+..... .+.++...+++...+ ++ +.+..+| .+++.
T Consensus 152 vgt~~~~l~~~d~~-g~~~~~~~~~~~--------------------~~~~~~~d~~g~l~v-~t--~~l~~~d-~~g~~ 206 (330)
T 3hxj_A 152 VGSNDNYLYAINPD-GTEKWRFKTNDA--------------------ITSAASIGKDGTIYF-GS--DKVYAIN-PDGTE 206 (330)
T ss_dssp EECTTSEEEEECTT-SCEEEEEECSSC--------------------CCSCCEECTTCCEEE-ES--SSEEEEC-TTSCE
T ss_pred EEcCCCEEEEECCC-CCEeEEEecCCC--------------------ceeeeEEcCCCEEEE-Ee--CEEEEEC-CCCcE
Confidence 67778999999998 777666553322 455666777887554 44 7899999 77766
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
...+.... ..+.++...++|...+.+... .+..+|. +++...........+.++...+++. +.
T Consensus 207 ~~~~~~~~--------~~~~~~~~~~~g~l~v~t~~~-------gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~-l~ 269 (330)
T 3hxj_A 207 KWNFYAGY--------WTVTRPAISEDGTIYVTSLDG-------HLYAINP-DGTEKWRFKTGKRIESSPVIGNTDT-IY 269 (330)
T ss_dssp EEEECCSS--------CCCSCCEECTTSCEEEEETTT-------EEEEECT-TSCEEEEEECSSCCCSCCEECTTSC-EE
T ss_pred EEEEccCC--------cceeceEECCCCeEEEEcCCC-------eEEEECC-CCCEeEEeeCCCCccccceEcCCCe-EE
Confidence 65554322 256778888888765544322 3555664 4554444444433344556666664 56
Q ss_pred EEeCCC-EEEEEcCCCcee
Q psy7108 268 AATTEG-VHIYSLDSGYVF 285 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~~~~~ 285 (703)
.++.+| +..++. +++..
T Consensus 270 v~t~~ggl~~~d~-~g~~~ 287 (330)
T 3hxj_A 270 FGSYDGHLYAINP-DGTEK 287 (330)
T ss_dssp EECTTCEEEEECT-TSCEE
T ss_pred EecCCCCEEEECC-CCcEE
Confidence 677776 988985 55544
No 241
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=98.19 E-value=4.3e-05 Score=78.74 Aligned_cols=205 Identities=10% Similarity=-0.001 Sum_probs=128.5
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIV 107 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~la 107 (703)
+..+|..|+.. .....+...+.++...+ ++. +..++.++.+..+|.. +............+.++...+++...+
T Consensus 119 l~~~d~~g~~~--~~~~~~~~~~~~~~~~~--~g~-l~vgt~~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v 192 (330)
T 3hxj_A 119 LYAINTDGTEK--WRFKTKKAIYATPIVSE--DGT-IYVGSNDNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYF 192 (330)
T ss_dssp EEEECTTSCEE--EEEECSSCCCSCCEECT--TSC-EEEECTTSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEE
T ss_pred EEEEcCCCCEE--EEEcCCCceeeeeEEcC--CCE-EEEEcCCCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEE
Confidence 34455456655 44444555667777776 666 5567778899999987 655444444455567777777887544
Q ss_pred EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce
Q psy7108 108 VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL 187 (703)
Q Consensus 108 s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~ 187 (703)
++ +.|..+| .+++......... ..+.++...++|. |..++.++.+..+|. ++..
T Consensus 193 -~t--~~l~~~d-~~g~~~~~~~~~~--------------------~~~~~~~~~~~g~-l~v~t~~~gl~~~~~-~g~~ 246 (330)
T 3hxj_A 193 -GS--DKVYAIN-PDGTEKWNFYAGY--------------------WTVTRPAISEDGT-IYVTSLDGHLYAINP-DGTE 246 (330)
T ss_dssp -ES--SSEEEEC-TTSCEEEEECCSS--------------------CCCSCCEECTTSC-EEEEETTTEEEEECT-TSCE
T ss_pred -Ee--CEEEEEC-CCCcEEEEEccCC--------------------cceeceEECCCCe-EEEEcCCCeEEEECC-CCCE
Confidence 44 8899999 7777665554322 1466777888876 555666788888884 5656
Q ss_pred EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEE
Q psy7108 188 LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWV 267 (703)
Q Consensus 188 ~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~ 267 (703)
+..+..... .+.++...+++.. .+++.++ .+..+|. +++...........+.++...++|+ |.
T Consensus 247 ~~~~~~~~~--------~~~~~~~~~~g~l-~v~t~~g------gl~~~d~-~g~~~~~~~~~~~~~~~~~~d~~g~-l~ 309 (330)
T 3hxj_A 247 KWRFKTGKR--------IESSPVIGNTDTI-YFGSYDG------HLYAINP-DGTEKWNFETGSWIIATPVIDENGT-IY 309 (330)
T ss_dssp EEEEECSSC--------CCSCCEECTTSCE-EEECTTC------EEEEECT-TSCEEEEEECSSCCCSCCEECTTCC-EE
T ss_pred eEEeeCCCC--------ccccceEcCCCeE-EEecCCC------CEEEECC-CCcEEEEEEcCCccccceEEcCCCE-EE
Confidence 555543221 2334555666654 4444432 4777785 6666555554555677777778876 55
Q ss_pred EEeCCC-EEEEEcCC
Q psy7108 268 AATTEG-VHIYSLDS 281 (703)
Q Consensus 268 s~s~Dg-v~iwd~~~ 281 (703)
.++.+| +++...+.
T Consensus 310 ~gt~~G~~~~~~~~~ 324 (330)
T 3hxj_A 310 FGTRNGKFYALFNLE 324 (330)
T ss_dssp EECTTSCEEEEEC--
T ss_pred EEcCCCeEEEEeccc
Confidence 678888 77766543
No 242
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.19 E-value=4.3e-05 Score=87.56 Aligned_cols=207 Identities=10% Similarity=0.063 Sum_probs=135.5
Q ss_pred CCcEEEEEcCCCceeEEEecCCCc--------------------------------EEEEEEecCCCEEEEEECCC----
Q psy7108 70 DKTVKLWNAVETDTQHETIQLLSD--------------------------------ALCVAYKPDGTEIVVATLDG---- 113 (703)
Q Consensus 70 Dg~V~iWd~~~~~~~~~~~~~~~~--------------------------------V~~v~~spdg~~las~s~dg---- 113 (703)
++.|+.+|..+++........... ...++++|++..++.++.++
T Consensus 189 ~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~~~~~~~g~~~w~~~g~~~~~~~g~~~w~~~~~d~~~~~vy~~~~~~~~w~ 268 (677)
T 1kb0_A 189 RGYITAYDAETGERKWRWFSVPGDPSKPFEDESMKRAARTWDPSGKWWEAGGGGTMWDSMTFDAELNTMYVGTGNGSPWS 268 (677)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTSCGGGCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSC
T ss_pred CCEEEEEECCCCcEEEEeccCCCCccccccccccccccccccccCceeEeCCCcccccceeEcCCCCEEEEECCCCcccc
Confidence 689999999999876655432211 12578899999998887664
Q ss_pred ---------------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCC---CEEEEEecCC
Q psy7108 114 ---------------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADG---SCILAAGQSK 175 (703)
Q Consensus 114 ---------------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg---~~l~s~s~dg 175 (703)
.|..+|.++|+.+-.++....- ....+ ... ....+....+| ..+++++.+|
T Consensus 269 ~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d---~wd~~-------~~~-~p~l~~~~~dG~~~~~l~~~~~~G 337 (677)
T 1kb0_A 269 HKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGD---NWDYT-------STQ-PMILADIKIAGKPRKVILHAPKNG 337 (677)
T ss_dssp HHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTC---CSCCC-------CCS-CCEEEEEEETTEEEEEEEECCTTS
T ss_pred CCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCc---ccccc-------cCC-CcEEEecccCCcEeeEEEEECCCC
Confidence 5999999999998777642210 00000 001 12223334477 6788899999
Q ss_pred cEEEEECCCCceEEEEEeccCCc---c-------------------------ccccccceeeeeccCCCEEEEEccc---
Q psy7108 176 YICIYSSREGILLKKFTITQNKS---L-------------------------DGINDFINRRKMTEFGNVSLIETRE--- 224 (703)
Q Consensus 176 ~I~lwD~~~~~~~~~~~~~~~~~---~-------------------------~~~~~~v~~~~~spdg~~l~~~~~~--- 224 (703)
.++++|.++|+.+..+......- + .+.. .-..++++|++..+++...+
T Consensus 338 ~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~-~w~~~a~dp~~~~~yv~~~~~~~ 416 (677)
T 1kb0_A 338 FFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAH-NWHPMSFNPQTGLVYLPAQNVPV 416 (677)
T ss_dssp EEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSS-CSSCCEEETTTTEEEEEEEECCC
T ss_pred EEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCccccc-CCCCceEcCCCCEEEEeChhcce
Confidence 99999999999987765322100 0 0000 01257889998888775431
Q ss_pred ----------C-------------C-----------CCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe
Q psy7108 225 ----------T-------------H-----------EGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 225 ----------~-------------~-----------~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s 270 (703)
+ . ......|..||+.+++.+-+... ...+.+..++.++..+++++
T Consensus 417 ~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~-~~~~~~g~~~~~g~~v~~g~ 495 (677)
T 1kb0_A 417 NLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEH-VSPWNGGTLTTAGNVVFQGT 495 (677)
T ss_dssp EEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEE-SSSCCCCEEEETTTEEEEEC
T ss_pred eeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCC-CCCCcCcceEeCCCEEEEEC
Confidence 0 0 00125789999999987665542 23344555677888888899
Q ss_pred CCC-EEEEEcCCCceeccee
Q psy7108 271 TEG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 271 ~Dg-v~iwd~~~~~~~~~~~ 289 (703)
.|+ +++||..+++.+..+.
T Consensus 496 ~dg~l~a~D~~tG~~lw~~~ 515 (677)
T 1kb0_A 496 ADGRLVAYHAATGEKLWEAP 515 (677)
T ss_dssp TTSEEEEEETTTCCEEEEEE
T ss_pred CCCcEEEEECCCCceeeeee
Confidence 999 9999999999876654
No 243
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=98.17 E-value=0.00016 Score=71.27 Aligned_cols=191 Identities=9% Similarity=0.033 Sum_probs=122.4
Q ss_pred eEEEecCCCc--EEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108 84 QHETIQLLSD--ALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY 161 (703)
Q Consensus 84 ~~~~~~~~~~--V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~ 161 (703)
+.....|... ...+.|+ ++.+..+.+.+|.|+++|+++++.+..+ -.... .-..+++
T Consensus 45 Vv~~~phd~~~ftqGL~~~-~~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~~~-------------------FgeGit~ 103 (268)
T 3nok_A 45 IIREYPHATNAFTQGLVFH-QGHFFESTGHQGTLRQLSLESAQPVWME-RLGNI-------------------FAEGLAS 103 (268)
T ss_dssp EEEEEECCTTCCEEEEEEE-TTEEEEEETTTTEEEECCSSCSSCSEEE-ECTTC-------------------CEEEEEE
T ss_pred EEEEEcCCCccccceEEEE-CCEEEEEcCCCCEEEEEECCCCcEEeEE-CCCCc-------------------ceeEEEE
Confidence 3344455544 4678887 4566677788899999999999987776 32210 1233555
Q ss_pred cCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCC
Q psy7108 162 SADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKG 241 (703)
Q Consensus 162 spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~ 241 (703)
.. ++..+..-.++.+.+||..+.+.+.++..... ...+++|++.++.+... ..|.++|..+.
T Consensus 104 ~g-~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~e-----------GwGLt~Dg~~L~vSdGs------~~l~~iDp~T~ 165 (268)
T 3nok_A 104 DG-ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGE-----------GWGLCYWNGKLVRSDGG------TMLTFHEPDGF 165 (268)
T ss_dssp CS-SCEEEEESSSCEEEEEETTTTEEEEEEECSSC-----------CCCEEEETTEEEEECSS------SEEEEECTTTC
T ss_pred eC-CEEEEEEccCCEEEEEECCcCcEEEEEeCCCc-----------eeEEecCCCEEEEECCC------CEEEEEcCCCC
Confidence 43 23344445678999999999999999875321 23445778888776643 38999999998
Q ss_pred ccceeecCC--c---cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------------------eeEEEcc
Q psy7108 242 DMAARVLKP--E---VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------------------LDISITP 296 (703)
Q Consensus 242 ~~~~~~~~h--~---~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------------------~~~~~sp 296 (703)
+...++.-. . ..++.+.|. +|+..+..-.+. |.+.|..+++....+. ..++++|
T Consensus 166 ~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp 244 (268)
T 3nok_A 166 ALVGAVQVKLRGQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEP 244 (268)
T ss_dssp CEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECT
T ss_pred eEEEEEEeCCCCcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcC
Confidence 877665532 1 235677877 775444443444 9999999998754443 2366776
Q ss_pred chhhhHhhcCCcceEEEE
Q psy7108 297 QSVKEALADKDYAKALMM 314 (703)
Q Consensus 297 d~~~~~l~sg~~~~~l~l 314 (703)
++.+.++.-+.+.....+
T Consensus 245 ~~~rlfVTGK~Wp~~~ev 262 (268)
T 3nok_A 245 GSGRIFMTGKLWPRLFEV 262 (268)
T ss_dssp TTCCEEEEETTCSEEEEE
T ss_pred CCCEEEEeCCCCCceEEE
Confidence 654444444444444443
No 244
>1k8q_A Triacylglycerol lipase, gastric; APHA beta hydrolase fold, hydrolase; HET: NAG BOG C11; 2.70A {Canis lupus familiaris} SCOP: c.69.1.6 PDB: 1hlg_A*
Probab=98.15 E-value=1.3e-07 Score=99.85 Aligned_cols=105 Identities=37% Similarity=0.604 Sum_probs=86.3
Q ss_pred cchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCC
Q psy7108 414 LPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESS 493 (703)
Q Consensus 414 sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (703)
.++..+++ +||+|+..|.||..+|..+..+.+....||.|+++
T Consensus 82 ~~a~~l~~---~G~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~---------------------------------- 124 (377)
T 1k8q_A 82 SLAFILAD---AGYDVWLGNSRGNTWARRNLYYSPDSVEFWAFSFD---------------------------------- 124 (377)
T ss_dssp CHHHHHHH---TTCEEEECCCTTSTTSCEESSSCTTSTTTTCCCHH----------------------------------
T ss_pred cHHHHHHH---CCCCEEEecCCCCCCCCCCCCCCCCcccccCccHH----------------------------------
Confidence 45555664 89999999999999998887777777888988887
Q ss_pred CcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhH
Q psy7108 494 KDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKV 573 (703)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~ 573 (703)
+...+|+.+.+++++...+..++.++|||+||..++..+.+.|+...++
T Consensus 125 -------------------------------~~~~~D~~~~i~~~~~~~~~~~~~lvG~S~Gg~ia~~~a~~~p~~~~~v 173 (377)
T 1k8q_A 125 -------------------------------EMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRI 173 (377)
T ss_dssp -------------------------------HHHHTHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCHHHHTTE
T ss_pred -------------------------------HHHhhhHHHHHHHHHHhcCcCceEEEEechhhHHHHHHHhcCchhhhhh
Confidence 6776799999999987767789999999999998887777777766688
Q ss_pred HHhhhhhhhhhcc
Q psy7108 574 RLNVLWAQSAFLG 586 (703)
Q Consensus 574 ~~~~~~~p~~~~~ 586 (703)
+.++..+|+....
T Consensus 174 ~~lvl~~~~~~~~ 186 (377)
T 1k8q_A 174 KTFYALAPVATVK 186 (377)
T ss_dssp EEEEEESCCSCCS
T ss_pred hEEEEeCCchhcc
Confidence 8888888875544
No 245
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=98.12 E-value=0.00029 Score=68.86 Aligned_cols=191 Identities=8% Similarity=-0.005 Sum_probs=122.0
Q ss_pred eEEEecCCCc--EEEEEEecCCCEEEEEECC--CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEE
Q psy7108 84 QHETIQLLSD--ALCVAYKPDGTEIVVATLD--GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTV 159 (703)
Q Consensus 84 ~~~~~~~~~~--V~~v~~spdg~~las~s~d--g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i 159 (703)
+.....|... ...+.|++ +....+.+.+ ..|+.+|+.+++.+..+...... .-..+
T Consensus 11 v~~~~phd~~~ftqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~-------------------fgeGi 70 (243)
T 3mbr_X 11 VVKRYPHDTTAFTEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPY-------------------FGAGI 70 (243)
T ss_dssp EEEEEECCTTCCEEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTC-------------------CEEEE
T ss_pred EEEEcCCCCccccccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCc-------------------ceeEE
Confidence 3344455543 56899986 5555666665 48999999999998887654320 11233
Q ss_pred EEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC
Q psy7108 160 CYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV 238 (703)
Q Consensus 160 ~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~ 238 (703)
+.. ++.|.. .-.++.+.+||..+.+.+.++.... ....++++++.++++... ..|.++|.
T Consensus 71 ~~~--~~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~~-----------~Gwglt~dg~~L~vSdgs------~~l~~iDp 131 (243)
T 3mbr_X 71 VAW--RDRLIQLTWRNHEGFVYDLATLTPRARFRYPG-----------EGWALTSDDSHLYMSDGT------AVIRKLDP 131 (243)
T ss_dssp EEE--TTEEEEEESSSSEEEEEETTTTEEEEEEECSS-----------CCCEEEECSSCEEEECSS------SEEEEECT
T ss_pred EEe--CCEEEEEEeeCCEEEEEECCcCcEEEEEeCCC-----------CceEEeeCCCEEEEECCC------CeEEEEeC
Confidence 433 444444 4567899999999999999987532 123445678877776543 37999999
Q ss_pred CCCccceeecCCc-----cceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee-------------------eeEE
Q psy7108 239 KKGDMAARVLKPE-----VRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL-------------------LDIS 293 (703)
Q Consensus 239 ~~~~~~~~~~~h~-----~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~-------------------~~~~ 293 (703)
.+.+...++.-.. ..++.+.|. +|+.++..-.+. |.+.|..+++....+. ..++
T Consensus 132 ~t~~~~~~I~V~~~g~~~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA 210 (243)
T 3mbr_X 132 DTLQQVGSIKVTAGGRPLDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIA 210 (243)
T ss_dssp TTCCEEEEEECEETTEECCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEE
T ss_pred CCCeEEEEEEEccCCcccccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEE
Confidence 9987766655321 245667765 666554443344 9999999988754433 2367
Q ss_pred EccchhhhHhhcCCcceEEEE
Q psy7108 294 ITPQSVKEALADKDYAKALMM 314 (703)
Q Consensus 294 ~spd~~~~~l~sg~~~~~l~l 314 (703)
++|++.+.++..+.+.....+
T Consensus 211 ~d~~~~~lfVTGK~wp~~~~v 231 (243)
T 3mbr_X 211 FDAEHDRLFVTGKRWPMLYEI 231 (243)
T ss_dssp EETTTTEEEEEETTCSEEEEE
T ss_pred EcCCCCEEEEECCCCCcEEEE
Confidence 777664444444555555444
No 246
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=98.11 E-value=8.9e-05 Score=84.98 Aligned_cols=201 Identities=11% Similarity=0.049 Sum_probs=128.3
Q ss_pred EEEEEcCCCCCCEEEEEeCCC-------------------cEEEEEcCCCceeEEEec--CC-------CcEEEEEEecC
Q psy7108 51 SCIEFSPVLSSTGMVSASWDK-------------------TVKLWNAVETDTQHETIQ--LL-------SDALCVAYKPD 102 (703)
Q Consensus 51 ~~l~~sp~~dg~~L~sgs~Dg-------------------~V~iWd~~~~~~~~~~~~--~~-------~~V~~v~~spd 102 (703)
..++++| ++..++.++.++ .|..+|..+++....... |. .....+....+
T Consensus 246 ~~~~~d~--~~~~vy~~~~~~~~w~~~~~~~~~gd~~~~~sv~AlD~~TG~~~W~~~~~~~d~wd~~~~~~p~l~~~~~d 323 (677)
T 1kb0_A 246 DSMTFDA--ELNTMYVGTGNGSPWSHKVRSPKGGDNLYLASIVALDPDTGKYKWHYQETPGDNWDYTSTQPMILADIKIA 323 (677)
T ss_dssp SCEEEET--TTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCCSCCCCCSCCEEEEEEET
T ss_pred cceeEcC--CCCEEEEECCCCccccCCCCCccCCCCeeeEEEEEEECCCCCEEEEEecCCCcccccccCCCcEEEecccC
Confidence 4678999 888888887664 499999999976655443 21 12333444457
Q ss_pred C---CEEEEEECCCeEEEEEcCCCcEEEEEeccccC------CCCCCCC---------ccchhhcccCCccEEEEEEcCC
Q psy7108 103 G---TEIVVATLDGQLIMFDVESAAQVGSVEARRDL------DSGRLDT---------DLVTREQSLKAKAVSTVCYSAD 164 (703)
Q Consensus 103 g---~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~------~~~~~~~---------~~~~~~~~~~~~~V~~i~~spd 164 (703)
| ..+++++.+|.++++|.++|+.+......... ..++... .....+.......-..++++|+
T Consensus 324 G~~~~~l~~~~~~G~l~~lD~~tG~~l~~~~~~~~~~~~~~d~~g~~~~~~~~~~~~~~~~~~P~~~G~~~w~~~a~dp~ 403 (677)
T 1kb0_A 324 GKPRKVILHAPKNGFFFVLDRTNGKFISAKNFVPVNWASGYDKHGKPIGIAAARDGSKPQDAVPGPYGAHNWHPMSFNPQ 403 (677)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEECTTSCEEECGGGGCTTSCEECSSCTTCSSCSSCCEEETT
T ss_pred CcEeeEEEEECCCCEEEEEECCCCCEeccccccccCcccccCCCCceeeccccCcCCCccEECcCcccccCCCCceEcCC
Confidence 8 67889999999999999999998776533210 0000000 0000000000011135788998
Q ss_pred CCEEEEEec-------------------------------------------CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108 165 GSCILAAGQ-------------------------------------------SKYICIYSSREGILLKKFTITQNKSLDG 201 (703)
Q Consensus 165 g~~l~s~s~-------------------------------------------dg~I~lwD~~~~~~~~~~~~~~~~~~~~ 201 (703)
+..+++... .+.|..||+.+++.+-++....
T Consensus 404 ~~~~yv~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~------ 477 (677)
T 1kb0_A 404 TGLVYLPAQNVPVNLMDDKKWEFNQAGPGKPQSGTGWNTAKFFNAEPPKSKPFGRLLAWDPVAQKAAWSVEHVS------ 477 (677)
T ss_dssp TTEEEEEEEECCCEEEECTTCCTTCCCTTSTTGGGTCCCCEEECSSCCCSCCEEEEEEEETTTTEEEEEEEESS------
T ss_pred CCEEEEeChhcceeeecccccccccccccccccccccccccccccccCCCCCccEEEEEeCCCCcEEeecCCCC------
Confidence 888877543 2779999999999887765321
Q ss_pred ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCc-cceEEEEEcCCCCEEEE
Q psy7108 202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPE-VRVFCVKFSPTGQAWVA 268 (703)
Q Consensus 202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~-~~V~~l~~spdg~~l~s 268 (703)
.+....++.++..+++++.++ .++.||.++++.+..+.... ....-+.+.++|+.+++
T Consensus 478 ---~~~~g~~~~~g~~v~~g~~dg------~l~a~D~~tG~~lw~~~~~~~~~~~p~~y~~~G~~~v~ 536 (677)
T 1kb0_A 478 ---PWNGGTLTTAGNVVFQGTADG------RLVAYHAATGEKLWEAPTGTGVVAAPSTYMVDGRQYVS 536 (677)
T ss_dssp ---SCCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred ---CCcCcceEeCCCEEEEECCCC------cEEEEECCCCceeeeeeCCCCcccCCEEEEeCCEEEEE
Confidence 234455677788777776543 89999999999888776432 22334566788875543
No 247
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=98.10 E-value=0.00078 Score=68.87 Aligned_cols=205 Identities=11% Similarity=0.022 Sum_probs=120.7
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECC--CeEEEEEcCCCcE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLD--GQLIMFDVESAAQ 125 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~d--g~I~vwd~~~~~~ 125 (703)
....+++|+| +++++++-..++.|..||.... ..........+..++++++|+.+++.... ..|..+|..+++.
T Consensus 32 ~~pegia~~~--~g~lyv~d~~~~~I~~~d~~g~--~~~~~~~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~~ 107 (306)
T 2p4o_A 32 TFLENLASAP--DGTIFVTNHEVGEIVSITPDGN--QQIHATVEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGTV 107 (306)
T ss_dssp CCEEEEEECT--TSCEEEEETTTTEEEEECTTCC--EEEEEECSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSCE
T ss_pred CCcceEEECC--CCCEEEEeCCCCeEEEECCCCc--eEEEEeCCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCeE
Confidence 4577899999 8987777777889999987653 33344455678999999999965554332 2477778777765
Q ss_pred EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCce-EEEEEeccC-Ccccccc
Q psy7108 126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGIL-LKKFTITQN-KSLDGIN 203 (703)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~-~~~~~~~~~-~~~~~~~ 203 (703)
........ ......++..+++..+++-..++.|..+|..+++. +........ .......
T Consensus 108 ~~~~~~~~-------------------~~~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~~~~~~~~~~~ 168 (306)
T 2p4o_A 108 ETLLTLPD-------------------AIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVF 168 (306)
T ss_dssp EEEEECTT-------------------CSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCS
T ss_pred EEEEeCCC-------------------ccccCcccccCCCcEEEEECCCCeEEEEeCCCCcEeEEEECCccccccccCCC
Confidence 43322110 01234455555555455444678899999876532 111111000 0000111
Q ss_pred ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-Ccc--ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEc
Q psy7108 204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK-GDM--AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSL 279 (703)
Q Consensus 204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~-~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~ 279 (703)
...+.+ +++++.++++.... ..|..+|... ++. ...+.. ......++++++|+.+++....+ |.+++.
T Consensus 169 ~~pngi--s~dg~~lyv~d~~~-----~~I~~~~~~~~g~~~~~~~~~~-~~~P~gi~vd~dG~l~va~~~~~~V~~~~~ 240 (306)
T 2p4o_A 169 PAANGL--KRFGNFLYVSNTEK-----MLLLRIPVDSTDKPGEPEIFVE-QTNIDDFAFDVEGNLYGATHIYNSVVRIAP 240 (306)
T ss_dssp CSEEEE--EEETTEEEEEETTT-----TEEEEEEBCTTSCBCCCEEEEE-SCCCSSEEEBTTCCEEEECBTTCCEEEECT
T ss_pred CcCCCc--CcCCCEEEEEeCCC-----CEEEEEEeCCCCCCCccEEEec-cCCCCCeEECCCCCEEEEeCCCCeEEEECC
Confidence 123344 88888777665432 3788887764 321 111111 12356789999998766655555 999987
Q ss_pred CCCce
Q psy7108 280 DSGYV 284 (703)
Q Consensus 280 ~~~~~ 284 (703)
+ ++.
T Consensus 241 ~-G~~ 244 (306)
T 2p4o_A 241 D-RST 244 (306)
T ss_dssp T-CCE
T ss_pred C-CCE
Confidence 5 443
No 248
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.09 E-value=0.00011 Score=84.26 Aligned_cols=199 Identities=11% Similarity=0.089 Sum_probs=126.3
Q ss_pred EEEEEcCCCCCCEEEEEeCCCc-------------------EEEEEcCCCceeEEEec--CC-------CcEEEEEEecC
Q psy7108 51 SCIEFSPVLSSTGMVSASWDKT-------------------VKLWNAVETDTQHETIQ--LL-------SDALCVAYKPD 102 (703)
Q Consensus 51 ~~l~~sp~~dg~~L~sgs~Dg~-------------------V~iWd~~~~~~~~~~~~--~~-------~~V~~v~~spd 102 (703)
..++++| ++.+++.++.++. |..+|..+++....... |. ..+.......+
T Consensus 238 ~~~~~d~--~~~~vy~~~~~g~~w~~~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~ 315 (689)
T 1yiq_A 238 DSFAYDP--ELNLLYIGVGNGSLWDPKWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPID 315 (689)
T ss_dssp SCEEEET--TTTEEEEECCCEESSCHHHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEET
T ss_pred cceeEcC--CCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccC
Confidence 3678999 8889999887764 99999999987765543 21 12222333346
Q ss_pred CC---EEEEEECCCeEEEEEcCCCcEEEEEecccc-CC------CCCCC------------CccchhhcccCCccEEEEE
Q psy7108 103 GT---EIVVATLDGQLIMFDVESAAQVGSVEARRD-LD------SGRLD------------TDLVTREQSLKAKAVSTVC 160 (703)
Q Consensus 103 g~---~las~s~dg~I~vwd~~~~~~~~~~~~~~~-~~------~~~~~------------~~~~~~~~~~~~~~V~~i~ 160 (703)
|+ .++.++.+|.++++|.++|+.+...+.... .. .++.. ......+..........++
T Consensus 316 G~~~~~v~~~~~~G~l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg~~w~~~a 395 (689)
T 1yiq_A 316 GKPRKVLMQAPKNGFFYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGAHDWQPMS 395 (689)
T ss_dssp TEEEEEEEECCTTSEEEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCSSCSSCCE
T ss_pred CcEEEEEEEECCCCeEEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccccCCCcce
Confidence 65 788899999999999999998865443220 00 00000 0000000000111123478
Q ss_pred EcCCCCEEEEEec---------------------------------------------CCcEEEEECCCCceEEEEEecc
Q psy7108 161 YSADGSCILAAGQ---------------------------------------------SKYICIYSSREGILLKKFTITQ 195 (703)
Q Consensus 161 ~spdg~~l~s~s~---------------------------------------------dg~I~lwD~~~~~~~~~~~~~~ 195 (703)
|+|+...+++... +|.|..||+.+++.+-++..+.
T Consensus 396 ~dp~~~~~yv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~ 475 (689)
T 1yiq_A 396 YNPDTGLVYIPAHIMSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT 475 (689)
T ss_dssp EETTTTEEEEEEEECCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS
T ss_pred ECCCCCEEEEeccccceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC
Confidence 8888877776532 3779999999999887766432
Q ss_pred CCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc-ceEEEEEcCCCCEE
Q psy7108 196 NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV-RVFCVKFSPTGQAW 266 (703)
Q Consensus 196 ~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~-~V~~l~~spdg~~l 266 (703)
......++..+..+++++.++ .++.||.++|+.+.++..+.. ...-+.|+.+|+..
T Consensus 476 ---------~~~~g~~~tagglvf~gt~dg------~l~a~D~~tG~~lw~~~~~~~~~~~p~ty~~~G~qy 532 (689)
T 1yiq_A 476 ---------IFNGGTLSTAGNLVFEGSADG------RVIAYAADTGEKLWEQPAASGVMAAPVTYSVDGEQY 532 (689)
T ss_dssp ---------SCCCCEEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred ---------CccCccceECCCEEEEECCCC------cEEEEECCCCccceeeeCCCCcccCceEEEECCEEE
Confidence 223335666777777776553 899999999998877764432 22446777888754
No 249
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=98.08 E-value=0.00085 Score=71.20 Aligned_cols=221 Identities=7% Similarity=-0.070 Sum_probs=127.9
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
++..+..+... ..+........+++|++ .+..|+ +-...+.|..+++..................+++.+.+..|
T Consensus 98 I~~i~~~~~~~--~~~~~~~~~~~gl~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 173 (386)
T 3v65_B 98 IRQVLPHRSEY--TLLLNNLENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 173 (386)
T ss_dssp EEEECTTSCCC--EEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEE
T ss_pred ceeeccCCCcE--EEEecCCCccEEEEEec--CCCeEEEEeCCCCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeE
Confidence 44445455443 33333345678999998 555554 54566789899987654222222233455778899866665
Q ss_pred EEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-C-CcEEEEECC
Q psy7108 107 VVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-S-KYICIYSSR 183 (703)
Q Consensus 107 as~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-d-g~I~lwD~~ 183 (703)
+.+ ...+.|.+.+++.......+.... .....++++|.+..|..+.. . +.|..+++.
T Consensus 174 Y~~d~~~~~I~~~~~dg~~~~~l~~~~l--------------------~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 174 YWTDSGTSRIEVANLDGAHRKVLLWQSL--------------------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp EEEETTTTEEEECBTTSCSCEEEECSSC--------------------SCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEcCCCCeEEEEeCCCCceEEeecCCC--------------------CCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 554 446788888887544333222211 15688999997776665543 3 678888887
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG 263 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg 263 (703)
......... .. ....+.++++|++..++++.... ..|..+|..................++++. .+
T Consensus 234 G~~~~~~~~--~~------~~~PnGlavd~~~~~lY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~P~giav~-~~ 299 (386)
T 3v65_B 234 GSGRRIIAD--TH------LFWPNGLTIDYAGRRMYWVDAKH-----HVIERANLDGSHRKAVISQGLPHPFAITVF-ED 299 (386)
T ss_dssp SCSCEEEEC--SS------CSCEEEEEEEGGGTEEEEEETTT-----TEEEEECTTSCSCEEEECSSCSSEEEEEEE-TT
T ss_pred CCCcEEEEE--CC------CCCeeeEEEeCCCCEEEEEECCC-----CEEEEEeCCCCeeEEEEECCCCCceEEEEE-CC
Confidence 543322221 11 12457899998777766654432 378888876433322232233456778873 33
Q ss_pred CEEEEEeCCC-EEEEEcCCCceec
Q psy7108 264 QAWVAATTEG-VHIYSLDSGYVFD 286 (703)
Q Consensus 264 ~~l~s~s~Dg-v~iwd~~~~~~~~ 286 (703)
..+.+-...+ |..++..+|+...
T Consensus 300 ~ly~td~~~~~V~~~~~~~G~~~~ 323 (386)
T 3v65_B 300 SLYWTDWHTKSINSANKFTGKNQE 323 (386)
T ss_dssp EEEEEETTTTEEEEEETTTCCSCE
T ss_pred EEEEeeCCCCeEEEEECCCCcceE
Confidence 3334444444 8888866665543
No 250
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=98.07 E-value=0.00054 Score=70.58 Aligned_cols=202 Identities=10% Similarity=0.090 Sum_probs=122.4
Q ss_pred CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec--------------------CCCcEEEEEEecCCCEEEE
Q psy7108 49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ--------------------LLSDALCVAYKPDGTEIVV 108 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~--------------------~~~~V~~v~~spdg~~las 108 (703)
...+++|++ ++++++++..++.|..|+..++. ...... ....+.++++.+++..|++
T Consensus 20 ~p~~i~~d~--~g~~l~v~~~~~~i~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v 96 (322)
T 2fp8_A 20 APNSFTFDS--TNKGFYTSVQDGRVIKYEGPNSG-FVDFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYI 96 (322)
T ss_dssp CCCCEECCT--TCSSEEEECTTSEEEEECCTTTC-EEEEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEE
T ss_pred CceEEEEcC--CCCEEEEEcCCCeEEEECCCCCc-eEEEecccccccccccccccchhccccCCCCceEEEcCCCCcEEE
Confidence 346788999 88878888888999999876653 222211 1135788999983345666
Q ss_pred EECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEec--------------
Q psy7108 109 ATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQ-------------- 173 (703)
Q Consensus 109 ~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~-------------- 173 (703)
+...+.|..+|..+++. ..+..... .........+++.+ +|+..++-..
T Consensus 97 ~d~~~~i~~~d~~~g~~-~~~~~~~~---------------~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~ 160 (322)
T 2fp8_A 97 VDCYYHLSVVGSEGGHA-TQLATSVD---------------GVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDT 160 (322)
T ss_dssp EETTTEEEEECTTCEEC-EEEESEET---------------TEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHH
T ss_pred EECCCCEEEEeCCCCEE-EEecccCC---------------CCcccccceEEEecCCCEEEEECCcccccccccceehcc
Confidence 65566688888775532 22221100 00012467899999 9987766432
Q ss_pred ---CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeec
Q psy7108 174 ---SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVL 248 (703)
Q Consensus 174 ---dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~ 248 (703)
++.|..+|..+++....... . ...+.++++|+|+.++++.... ..|..+++..... ...+.
T Consensus 161 ~~~~g~v~~~d~~~~~~~~~~~~-~--------~~p~gia~~~dg~~lyv~d~~~-----~~I~~~~~~~~~~~~~~~~~ 226 (322)
T 2fp8_A 161 SDKTGRLIKYDPSTKETTLLLKE-L--------HVPGGAEVSADSSFVLVAEFLS-----HQIVKYWLEGPKKGTAEVLV 226 (322)
T ss_dssp TCCCEEEEEEETTTTEEEEEEEE-E--------SCCCEEEECTTSSEEEEEEGGG-----TEEEEEESSSTTTTCEEEEE
T ss_pred cCCCceEEEEeCCCCEEEEeccC-C--------ccCcceEECCCCCEEEEEeCCC-----CeEEEEECCCCcCCccceEE
Confidence 36789999877754332211 0 1346789999999766654321 3677777664211 11111
Q ss_pred CCccceEEEEEcCCCCEEEEEeC----------CC-EEEEEcCCCcee
Q psy7108 249 KPEVRVFCVKFSPTGQAWVAATT----------EG-VHIYSLDSGYVF 285 (703)
Q Consensus 249 ~h~~~V~~l~~spdg~~l~s~s~----------Dg-v~iwd~~~~~~~ 285 (703)
...+ ...++++++|++.++... .+ |..++.+ ++.+
T Consensus 227 ~~~g-P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~ 272 (322)
T 2fp8_A 227 KIPN-PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNIL 272 (322)
T ss_dssp ECSS-EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEE
T ss_pred eCCC-CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEE
Confidence 1223 778999999987666544 23 6777754 4443
No 251
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=98.07 E-value=0.00012 Score=84.13 Aligned_cols=207 Identities=14% Similarity=0.091 Sum_probs=132.8
Q ss_pred CCcEEEEEcCCCceeEEEecCC-------------------------------CcEEEEEEecCCCEEEEEECCCe----
Q psy7108 70 DKTVKLWNAVETDTQHETIQLL-------------------------------SDALCVAYKPDGTEIVVATLDGQ---- 114 (703)
Q Consensus 70 Dg~V~iWd~~~~~~~~~~~~~~-------------------------------~~V~~v~~spdg~~las~s~dg~---- 114 (703)
+|.|+.||..+++......... .....++++|++..+++++.++.
T Consensus 182 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~w~~~~~g~~~w~~~~~d~~~~~vy~~~~~g~~w~~ 261 (689)
T 1yiq_A 182 RGYVTAYDAETGKEAWRFYTVPGDPKLPPEGKGMEIAAKTWFGDAYVEQGGGGTAWDSFAYDPELNLLYIGVGNGSLWDP 261 (689)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCCSHHHHHHHTTCCSSTHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCcccccccccccccccccCCceeeecCCCCccccceeEcCCCCEEEEeCCCCCcccc
Confidence 6899999999998766554211 00125788999999999887764
Q ss_pred ---------------EEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC---EEEEEecCCc
Q psy7108 115 ---------------LIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS---CILAAGQSKY 176 (703)
Q Consensus 115 ---------------I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~---~l~s~s~dg~ 176 (703)
|..+|.++|+.+-.++....- .+. ..............+|+ .++.++.+|.
T Consensus 262 ~~~~~~~gd~~y~~~v~AlD~~TG~~~W~~~~~~~d--------~wd---~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~ 330 (689)
T 1yiq_A 262 KWRSQAKGDNLFLSSIVAVNADTGEYVWHYQTTPGD--------AWD---YTATQHMILAELPIDGKPRKVLMQAPKNGF 330 (689)
T ss_dssp HHHHTTCSCCTTTTEEEEEETTTCCEEEEEESSTTC--------CSC---CCCCSCEEEEEEEETTEEEEEEEECCTTSE
T ss_pred CCCCCCCCCceeeeeEEEEEccCCceeEeeecCCcc--------ccc---ccCCCCcEEEeeccCCcEEEEEEEECCCCe
Confidence 999999999998877643110 000 00011222222233565 7888999999
Q ss_pred EEEEECCCCceEEEEEeccCC-----------c---------c-c-----------cccccceeeeeccCCCEEEEEccc
Q psy7108 177 ICIYSSREGILLKKFTITQNK-----------S---------L-D-----------GINDFINRRKMTEFGNVSLIETRE 224 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~~~~-----------~---------~-~-----------~~~~~v~~~~~spdg~~l~~~~~~ 224 (703)
++++|.++|+.+......... . . + +. ..-..++++|+...+++...+
T Consensus 331 l~~lD~~tG~~l~~~~~~~~~w~~~~~~~~~~pi~~~~~~~~~~~~~~~~~~p~~~Gg-~~w~~~a~dp~~~~~yv~~~~ 409 (689)
T 1yiq_A 331 FYVIDRATGELLSAKGIVPQSWTKGMDMKTGRPILDEENAAYWKNGKRNLVTPAFWGA-HDWQPMSYNPDTGLVYIPAHI 409 (689)
T ss_dssp EEEEETTTCCEEEEEESSCCSSEEEEETTTTEEEECHHHHCTTTSSSCEEESSCTTCS-SCSSCCEEETTTTEEEEEEEE
T ss_pred EEEEECCCCCEeccccccccccccccCccCCCcccchhhccccCCCCeeEeCCCcccc-cCCCcceECCCCCEEEEeccc
Confidence 999999999987554322100 0 0 0 00 011237889988877765331
Q ss_pred C--------------------CCC-------------------CeeEEECCCCCCCccceeecCCccceEEEEEcCCCCE
Q psy7108 225 T--------------------HEG-------------------GNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQA 265 (703)
Q Consensus 225 ~--------------------~~~-------------------~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~ 265 (703)
. ..+ -...+..||+.+++.+-+...+. .+..-.++..+..
T Consensus 410 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~p~~~~~~~~~~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~g~~~taggl 488 (689)
T 1yiq_A 410 MSAYYEHIPEAPKRNPFKSMYQLGLRTGMMPEGAEGLLEMAKSWSGKLIAWDPVKQQAAWEVPYVT-IFNGGTLSTAGNL 488 (689)
T ss_dssp CCEEEECCSSCCCCCSCTTSCCCSSEECCCCSSHHHHHHHHTTCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTE
T ss_pred cceeeeeccccccccccccccccCccccccCcccccCCCCCCCcceeEEEEECCCCCeEeEccCCC-CccCccceECCCE
Confidence 0 000 02579999999998776655433 2333355667888
Q ss_pred EEEEeCCC-EEEEEcCCCceeccee
Q psy7108 266 WVAATTEG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 266 l~s~s~Dg-v~iwd~~~~~~~~~~~ 289 (703)
+++++.|+ ++.||.++|+.+-.+.
T Consensus 489 vf~gt~dg~l~a~D~~tG~~lw~~~ 513 (689)
T 1yiq_A 489 VFEGSADGRVIAYAADTGEKLWEQP 513 (689)
T ss_dssp EEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEECCCCcEEEEECCCCccceeee
Confidence 99999999 9999999999876554
No 252
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=98.07 E-value=0.00067 Score=67.72 Aligned_cols=189 Identities=5% Similarity=-0.097 Sum_probs=112.9
Q ss_pred CEEEEEeCCCcEEEEEcCCCcee----EEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccC
Q psy7108 62 TGMVSASWDKTVKLWNAVETDTQ----HETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDL 135 (703)
Q Consensus 62 ~~L~sgs~Dg~V~iWd~~~~~~~----~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~ 135 (703)
.+|+.+.. +.|+.+++...... ..... ....+.+++|++++..|+.+. .++.|..++++++.....+...
T Consensus 2 ~~l~~~~~-~~I~~~~~~g~~~~~~~~~~~~~~~~~~~~gi~~d~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~--- 77 (267)
T 1npe_A 2 THLLFAQT-GKIERLPLERNTMKKTEAKAFLHIPAKVIIGLAFDCVDKVVYWTDISEPSIGRASLHGGEPTTIIRQD--- 77 (267)
T ss_dssp EEEEEEEE-EEEEEEEESSSCBCGGGCEEEEEEEEEEEEEEEEETTTTEEEEEETTTTEEEEEESSSCCCEEEECTT---
T ss_pred cEEEEEcC-CeEEEEEecCcccccccceeeecCCCCcEEEEEEecCCCEEEEEECCCCEEEEEecCCCCcEEEEECC---
Confidence 45555554 47888888654321 11111 234578999999877666655 4678999999766543332211
Q ss_pred CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccC
Q psy7108 136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEF 214 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spd 214 (703)
......++++|++..|..+ ...+.|.++|+..... ..+... . ......++++|+
T Consensus 78 -----------------~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~~-~~~~~~-~------~~~P~~i~vd~~ 132 (267)
T 1npe_A 78 -----------------LGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQR-RVLFDT-G------LVNPRGIVTDPV 132 (267)
T ss_dssp -----------------CCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECS-S------CSSEEEEEEETT
T ss_pred -----------------CCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCCE-EEEEEC-C------CCCccEEEEeeC
Confidence 1256889999976666655 4567899999875432 222111 1 124578899997
Q ss_pred CCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCCCc
Q psy7108 215 GNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDSGY 283 (703)
Q Consensus 215 g~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~~~ 283 (703)
+..++++.... .. ..|..++.... ....+. ..-.....++++|+++.|..+... + |.+++.++..
T Consensus 133 ~g~lyv~~~~~-~~--~~I~~~~~dg~-~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~ 200 (267)
T 1npe_A 133 RGNLYWTDWNR-DN--PKIETSHMDGT-NRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPG 200 (267)
T ss_dssp TTEEEEEECCS-SS--CEEEEEETTSC-CCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTEEE
T ss_pred CCEEEEEECCC-CC--cEEEEEecCCC-CcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCCCc
Confidence 66666554321 01 25655554432 222221 223457899999998877666554 4 9999987543
No 253
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=98.02 E-value=0.0016 Score=64.39 Aligned_cols=216 Identities=12% Similarity=0.112 Sum_probs=126.7
Q ss_pred ccCCCcCeEEEEEcCCCCCCEEEE-EeCCCcEEEEEcCCCceeEEE-ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 43 LSGHEGPVSCIEFSPVLSSTGMVS-ASWDKTVKLWNAVETDTQHET-IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 43 l~gH~~~V~~l~~sp~~dg~~L~s-gs~Dg~V~iWd~~~~~~~~~~-~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
+.|-.+.+..++|+| +++.|++ ...++.|...|.. ++....+ .........+++.+++.++++.-.++.+.++++
T Consensus 22 l~g~~~~lSGla~~~--~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v 98 (255)
T 3qqz_A 22 IAGITNNISSLTWSA--QSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDFVKDLETIEYIGDNQFVISDERDYAIYVISL 98 (255)
T ss_dssp CTTCCSCEEEEEEET--TTTEEEEEEETTEEEEEEETT-CCEEEEEECSSCSSEEEEEECSTTEEEEEETTTTEEEEEEE
T ss_pred CCCcccCcceeEEeC--CCCEEEEEECCCCeEEEEeCC-CCEEEEEecCCCCChHHeEEeCCCEEEEEECCCCcEEEEEc
Confidence 445556899999999 7665554 6667788888876 5433333 233367888999998876666556788999998
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECC---CCceEEEEEeccCC
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSR---EGILLKKFTITQNK 197 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~---~~~~~~~~~~~~~~ 197 (703)
.....+.......- .. ...........++|+|+++.|.++.......+|.+. ....+....... .
T Consensus 99 ~~~~~i~~~~~~~~-~~----------~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~~~g~~~~~~l~i~~~~~-~ 166 (255)
T 3qqz_A 99 TPNSEVKILKKIKI-PL----------QESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYKVNGLLSSNELHISKDKA-L 166 (255)
T ss_dssp CTTCCEEEEEEEEC-CC----------SSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEEEESTTCSSCCEEEECHH-H
T ss_pred CCCCeeeeeeeecc-cc----------ccccccCCcceEEEeCCCCEEEEEECcCCceEEEEcccccCCceeeecchh-h
Confidence 76543222221110 00 001123457899999999887777665555555543 111122221100 0
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC---------ccceEEEEEcCCCCEEEE
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP---------EVRVFCVKFSPTGQAWVA 268 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h---------~~~V~~l~~spdg~~l~s 268 (703)
........+..++++|....+++.+..+ +.+..+|.. |+.+..+.-. -.....|+|.++|+ |..
T Consensus 167 ~~~~~~~d~S~l~~dp~tg~lliLS~~s-----~~L~~~d~~-g~~~~~~~L~~g~~~l~~~~~qpEGia~d~~G~-lyI 239 (255)
T 3qqz_A 167 QRQFTLDDVSGAEFNQQKNTLLVLSHES-----RALQEVTLV-GEVIGEMSLTKGSRGLSHNIKQAEGVAMDASGN-IYI 239 (255)
T ss_dssp HHTCCSSCCCEEEEETTTTEEEEEETTT-----TEEEEECTT-CCEEEEEECSTTGGGCSSCCCSEEEEEECTTCC-EEE
T ss_pred ccccccCCceeEEEcCCCCeEEEEECCC-----CeEEEEcCC-CCEEEEEEcCCccCCcccccCCCCeeEECCCCC-EEE
Confidence 0000112467889999877666655433 467777765 4333332211 12578999999998 444
Q ss_pred EeCCC-EEEEEcC
Q psy7108 269 ATTEG-VHIYSLD 280 (703)
Q Consensus 269 ~s~Dg-v~iwd~~ 280 (703)
+++.. +++|...
T Consensus 240 vsE~n~~y~f~~~ 252 (255)
T 3qqz_A 240 VSEPNRFYRFTPQ 252 (255)
T ss_dssp EETTTEEEEEEC-
T ss_pred EcCCceEEEEEec
Confidence 46666 6666543
No 254
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.99 E-value=0.0013 Score=68.69 Aligned_cols=219 Identities=7% Similarity=-0.073 Sum_probs=126.2
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEE
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEI 106 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~l 106 (703)
++..+.++... ..+........+++|++ .+..|+ +-...+.|..+++..................+++.+.+..|
T Consensus 55 I~~i~~~g~~~--~~~~~~~~~~~~l~~d~--~~~~ly~~D~~~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~l 130 (349)
T 3v64_C 55 IRQVLPHRSEY--TLLLNNLENAIALDFHH--RRELVFWSDVTLDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKL 130 (349)
T ss_dssp EEEECTTSCCE--EEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEE
T ss_pred eEEEeCCCCee--EEeecCCCceEEEEEec--cccEEEEEeccCCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeE
Confidence 44445555443 33333334578999998 555555 44566788889987654322222233456789999866665
Q ss_pred EEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cC-CcEEEEECC
Q psy7108 107 VVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QS-KYICIYSSR 183 (703)
Q Consensus 107 as~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~d-g~I~lwD~~ 183 (703)
+.+ ...+.|.+.+++.......+.... .....++++|.+..|..+. .. +.|..+++.
T Consensus 131 y~~d~~~~~I~~~~~dG~~~~~l~~~~l--------------------~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 131 YWTDSGTSRIEVANLDGAHRKVLLWQSL--------------------EKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp EEEETTTTEEEEEETTSCSCEEEECTTC--------------------SCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred EEEcCCCCeEEEEcCCCCceEEEEeCCC--------------------CCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 544 446789999987554332222211 1468899999766665544 33 678888876
Q ss_pred CCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCC
Q psy7108 184 EGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTG 263 (703)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg 263 (703)
.... ..+.. . .....+.++++|++..++++.... ..|..+|..................++++. .+
T Consensus 191 G~~~-~~~~~-~------~~~~PnGla~d~~~~~lY~aD~~~-----~~I~~~~~dG~~~~~~~~~~~~~P~giav~-~~ 256 (349)
T 3v64_C 191 GSGR-RIIAD-T------HLFWPNGLTIDYAGRRMYWVDAKH-----HVIERANLDGSHRKAVISQGLPHPFAITVF-ED 256 (349)
T ss_dssp SCSC-EESCC-S------SCSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSSCSSEEEEEEE-TT
T ss_pred CCCc-EEEEE-C------CCCCcceEEEeCCCCEEEEEECCC-----CEEEEEeCCCCceEEEEeCCCCCceEEEEE-CC
Confidence 4322 22110 0 112457899998877776654432 367777765433222222233456778773 33
Q ss_pred CEEEEEeC-CC-EEEEEcCCCcee
Q psy7108 264 QAWVAATT-EG-VHIYSLDSGYVF 285 (703)
Q Consensus 264 ~~l~s~s~-Dg-v~iwd~~~~~~~ 285 (703)
.+..+.. .+ |..++..+|+..
T Consensus 257 -~ly~td~~~~~V~~~~~~~G~~~ 279 (349)
T 3v64_C 257 -SLYWTDWHTKSINSANKFTGKNQ 279 (349)
T ss_dssp -EEEEEETTTTEEEEEETTTCCSC
T ss_pred -EEEEecCCCCeEEEEEccCCCcc
Confidence 4544443 44 888886666543
No 255
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.92 E-value=0.0061 Score=62.51 Aligned_cols=203 Identities=7% Similarity=-0.029 Sum_probs=118.8
Q ss_pred CcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCC---ceeEEEec-CCCcEEEEEEecCCCEEEEE-ECCCeEEEEEc
Q psy7108 47 EGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVET---DTQHETIQ-LLSDALCVAYKPDGTEIVVA-TLDGQLIMFDV 120 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~---~~~~~~~~-~~~~V~~v~~spdg~~las~-s~dg~I~vwd~ 120 (703)
.....+++|++ .+..|+ +-..++.|..+++.+. .....+.. .-.....+++++.+..|+.+ ..++.|.+.|+
T Consensus 29 ~~~p~g~~~d~--~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~~~~~ 106 (316)
T 1ijq_A 29 LRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 106 (316)
T ss_dssp CSSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEET
T ss_pred CCceEEEEEEe--CCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCCCCCcCEEEEeecCCeEEEEECCCCEEEEEeC
Confidence 45678999998 655555 4455688999998651 22222332 22456789998766656544 55788999998
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--CcEEEEECCCCceEEEEEeccCCc
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--KYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--g~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
+.......+.... .....++++|.+..|..+... +.|...++... ....+....
T Consensus 107 ~g~~~~~~~~~~~--------------------~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG~-~~~~~~~~~--- 162 (316)
T 1ijq_A 107 KGVKRKTLFRENG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-DIYSLVTEN--- 162 (316)
T ss_dssp TSSSEEEEEECTT--------------------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-CEEEEECSS---
T ss_pred CCCceEEEEECCC--------------------CCcceEEeCCCCCEEEEEccCCCCeEEEEcCCCC-CeEEEEECC---
Confidence 7544333332211 156889999977666655432 67888887643 333332111
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceee-cC--CccceEEEEEcCCCCEEEEEeCCC-E
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARV-LK--PEVRVFCVKFSPTGQAWVAATTEG-V 274 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~-~~--h~~~V~~l~~spdg~~l~s~s~Dg-v 274 (703)
....+.+++++++..++++.... ..|..+|..... ...+ .. .-....++++. .+..+++-...+ |
T Consensus 163 ----~~~P~gla~d~~~~~lY~~D~~~-----~~I~~~d~dg~~-~~~~~~~~~~~~~P~giav~-~~~ly~~d~~~~~V 231 (316)
T 1ijq_A 163 ----IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGN-RKTILEDEKRLAHPFSLAVF-EDKVFWTDIINEAI 231 (316)
T ss_dssp ----CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCS-CEEEEECTTTTSSEEEEEEE-TTEEEEEETTTTEE
T ss_pred ----CCCceEEEEeccCCEEEEEECCC-----CeEEEEecCCCc-eEEEeecCCccCCcEEEEEE-CCEEEEEECCCCeE
Confidence 12567899999877776655432 367777776432 2222 11 12345677775 343334444444 8
Q ss_pred EEEEcCCCceec
Q psy7108 275 HIYSLDSGYVFD 286 (703)
Q Consensus 275 ~iwd~~~~~~~~ 286 (703)
..++..+++...
T Consensus 232 ~~~~~~~g~~~~ 243 (316)
T 1ijq_A 232 FSANRLTGSDVN 243 (316)
T ss_dssp EEEETTTCCCCE
T ss_pred EEEeCCCCcceE
Confidence 888877666443
No 256
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.90 E-value=0.0046 Score=65.80 Aligned_cols=220 Identities=8% Similarity=-0.048 Sum_probs=128.3
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCc---eeEEEec-CCCcEEEEEEecC
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETD---TQHETIQ-LLSDALCVAYKPD 102 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~---~~~~~~~-~~~~V~~v~~spd 102 (703)
++..+.++... ..+......+.+++|++ .+..|+-+ ...+.|+.+++.... ....+.. .......+++.+.
T Consensus 94 I~~i~l~~~~~--~~~~~~~~~~~~l~~d~--~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~~~~p~glavD~~ 169 (400)
T 3p5b_L 94 VRKMTLDRSEY--TSLIPNLRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWI 169 (400)
T ss_dssp EEEECTTSCSC--EEEECSCSCEEEEEEET--TTTEEEEEETTTTEEEEEEC------CCCEEEECSSCSCEEEEEEETT
T ss_pred eEEEccCCcce--eEeccccCcceEEeeee--ccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCCCCCcccEEEEec
Confidence 44444444433 33444456788999998 55555544 456788888886521 1223333 4456788999986
Q ss_pred CCEEEEE-ECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEE
Q psy7108 103 GTEIVVA-TLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICI 179 (703)
Q Consensus 103 g~~las~-s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~l 179 (703)
+..|+.+ ...+.|.+.+++.......+.... .....++++|.+..|..+.. .+.|..
T Consensus 170 ~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~~--------------------~~P~~iavdp~~g~ly~td~~~~~~I~~ 229 (400)
T 3p5b_L 170 HSNIYWTDSVLGTVSVADTKGVKRKTLFRENG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKK 229 (400)
T ss_dssp TTEEEEEETTTTEEEEECTTTCSEEEEEECSS--------------------CCEEEEEEETTTTEEEEEECSSSCCEEE
T ss_pred CCceEEEECCCCeEEEEeCCCCceEEEEeCCC--------------------CCcceEEEecccCeEEEEeCCCCCEEEE
Confidence 5555554 456789999987665444433221 14688999997666665542 367888
Q ss_pred EECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEE
Q psy7108 180 YSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCV 257 (703)
Q Consensus 180 wD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l 257 (703)
.++............ ....+.+++++++..++++.... ..|...|+........... .-....++
T Consensus 230 ~~~dG~~~~~~~~~~--------l~~P~glavd~~~~~lY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~l~~P~gl 296 (400)
T 3p5b_L 230 GGLNGVDIYSLVTEN--------IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSL 296 (400)
T ss_dssp EETTSCSCEEEECSS--------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCCCEEEEECSSTTSSEEEE
T ss_pred EeCCCCccEEEEECC--------CCceEEEEEEeCCCEEEEEECCC-----CEEEEEeCCCCccEEEEeCCCCCCCCEEE
Confidence 888754332222111 12567899998887777664332 3677777654332222222 12335567
Q ss_pred EEcCCCCEEEEEeCC-C-EEEEEcCCCceec
Q psy7108 258 KFSPTGQAWVAATTE-G-VHIYSLDSGYVFD 286 (703)
Q Consensus 258 ~~spdg~~l~s~s~D-g-v~iwd~~~~~~~~ 286 (703)
++ ++..++.+... + |..++..+|+...
T Consensus 297 ~v--~~~~lywtd~~~~~V~~~~~~~G~~~~ 325 (400)
T 3p5b_L 297 AV--FEDKVFWTDIINEAIFSANRLTGSDVN 325 (400)
T ss_dssp EE--ETTEEEEEESSSCSEEEEESSSCCCCE
T ss_pred EE--eCCEEEEecCCCCeEEEEEcCCCCceE
Confidence 66 34455444443 4 8888877776543
No 257
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.85 E-value=0.00076 Score=71.00 Aligned_cols=195 Identities=11% Similarity=0.074 Sum_probs=116.1
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcE-----EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccC
Q psy7108 61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDA-----LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDL 135 (703)
Q Consensus 61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V-----~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~ 135 (703)
+..++.++.++.+..+|..+++............ ...... +..+++++.++.+..+|..+++.+.........
T Consensus 143 ~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~--~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~~ 220 (376)
T 3q7m_A 143 DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTA--FGAAVVGGDNGRVSAVLMEQGQMIWQQRISQAT 220 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CCCCCCEEE--TTEEEECCTTTEEEEEETTTCCEEEEEECCC--
T ss_pred CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEE--CCEEEEEcCCCEEEEEECCCCcEEEEEecccCC
Confidence 3577888889999999998887655543322111 112222 456778888999999999999987666532110
Q ss_pred CCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC
Q psy7108 136 DSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG 215 (703)
Q Consensus 136 ~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 215 (703)
+... ..........++ . .+..+++++.++.+..+|.++++.+...... ....+.. ++
T Consensus 221 --~~~~---~~~~~~~~~~p~----~--~~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~----------~~~~~~~--~~ 277 (376)
T 3q7m_A 221 --GSTE---IDRLSDVDTTPV----V--VNGVVFALAYNGNLTALDLRSGQIMWKRELG----------SVNDFIV--DG 277 (376)
T ss_dssp --------------CCCCCCE----E--ETTEEEEECTTSCEEEEETTTCCEEEEECCC----------CEEEEEE--ET
T ss_pred --CCcc---cccccccCCCcE----E--ECCEEEEEecCcEEEEEECCCCcEEeeccCC----------CCCCceE--EC
Confidence 0000 000000000111 1 2466777888899999999999877654321 1122222 34
Q ss_pred CEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-ccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceecce
Q psy7108 216 NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-EVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPF 288 (703)
Q Consensus 216 ~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~ 288 (703)
..+++++.++ .+..+|..+++........ ...+..... .+..++.++.+| +.++|..+++.....
T Consensus 278 ~~l~~~~~~g------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~--~~~~l~v~~~~g~l~~~d~~tG~~~~~~ 344 (376)
T 3q7m_A 278 NRIYLVDQND------RVMALTIDGGVTLWTQSDLLHRLLTSPVL--YNGNLVVGDSEGYLHWINVEDGRFVAQQ 344 (376)
T ss_dssp TEEEEEETTC------CEEEEETTTCCEEEEECTTTTSCCCCCEE--ETTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CEEEEEcCCC------eEEEEECCCCcEEEeecccCCCcccCCEE--ECCEEEEEeCCCeEEEEECCCCcEEEEE
Confidence 5555555432 5888899888876555421 222222232 256788888898 999999998875443
No 258
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=97.84 E-value=0.0011 Score=69.58 Aligned_cols=191 Identities=12% Similarity=0.095 Sum_probs=115.4
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEEecC---------CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEe
Q psy7108 60 SSTGMVSASWDKTVKLWNAVETDTQHETIQL---------LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVE 130 (703)
Q Consensus 60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~---------~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~ 130 (703)
.+..++.++.++.|..+|..+++........ ...+.+. ...++..+++++.++.|..+|.++|+.+-...
T Consensus 52 ~~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~~~ 130 (376)
T 3q7m_A 52 ADNVVYAADRAGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGG-VTVSGGHVYIGSEKAQVYALNTSDGTVAWQTK 130 (376)
T ss_dssp ETTEEEEECTTSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEE-EEEETTEEEEEETTSEEEEEETTTCCEEEEEE
T ss_pred ECCEEEEEcCCCeEEEEEccCCceeeeecCccccccccccCcccccC-ceEeCCEEEEEcCCCEEEEEECCCCCEEEEEe
Confidence 3567888888899999999888765544332 2233222 22245678888899999999999999876665
Q ss_pred ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc-cccccccceee
Q psy7108 131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS-LDGINDFINRR 209 (703)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-~~~~~~~v~~~ 209 (703)
...... ..++ .. +..+++++.++.|..+|.++++.+..+....... ..+ ....
T Consensus 131 ~~~~~~----------------~~p~----~~--~~~v~v~~~~g~l~~~d~~tG~~~W~~~~~~~~~~~~~----~~~~ 184 (376)
T 3q7m_A 131 VAGEAL----------------SRPV----VS--DGLVLIHTSNGQLQALNEADGAVKWTVNLDMPSLSLRG----ESAP 184 (376)
T ss_dssp CSSCCC----------------SCCE----EE--TTEEEEECTTSEEEEEETTTCCEEEEEECCC-----CC----CCCC
T ss_pred CCCceE----------------cCCE----EE--CCEEEEEcCCCeEEEEECCCCcEEEEEeCCCCceeecC----CCCc
Confidence 432210 0011 11 4577888889999999999999887765432210 000 0112
Q ss_pred eeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc-------ceEEEEEcC--CCCEEEEEeCCC-EEEEEc
Q psy7108 210 KMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV-------RVFCVKFSP--TGQAWVAATTEG-VHIYSL 279 (703)
Q Consensus 210 ~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~-------~V~~l~~sp--dg~~l~s~s~Dg-v~iwd~ 279 (703)
... +..++++..++ .+..+|..+++.......... .+..+.-+| .+..++.++.++ +..+|.
T Consensus 185 ~~~--~~~v~~g~~~g------~l~~~d~~tG~~~w~~~~~~~~~~~~~~~~~~~~~~p~~~~~~v~~~~~~g~l~~~d~ 256 (376)
T 3q7m_A 185 TTA--FGAAVVGGDNG------RVSAVLMEQGQMIWQQRISQATGSTEIDRLSDVDTTPVVVNGVVFALAYNGNLTALDL 256 (376)
T ss_dssp EEE--TTEEEECCTTT------EEEEEETTTCCEEEEEECCC-----------CCCCCCEEETTEEEEECTTSCEEEEET
T ss_pred EEE--CCEEEEEcCCC------EEEEEECCCCcEEEEEecccCCCCcccccccccCCCcEEECCEEEEEecCcEEEEEEC
Confidence 222 33455554432 688888888876654432210 000011111 245677777777 999999
Q ss_pred CCCcee
Q psy7108 280 DSGYVF 285 (703)
Q Consensus 280 ~~~~~~ 285 (703)
.+++..
T Consensus 257 ~tG~~~ 262 (376)
T 3q7m_A 257 RSGQIM 262 (376)
T ss_dssp TTCCEE
T ss_pred CCCcEE
Confidence 888764
No 259
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.67 E-value=0.017 Score=67.45 Aligned_cols=202 Identities=14% Similarity=0.157 Sum_probs=129.4
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-c--------CCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-Q--------LLSDALCVAYKPDGTEIVVATLDGQLIM 117 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-~--------~~~~V~~v~~spdg~~las~s~dg~I~v 117 (703)
...|.++...+ +|.+. .|+.++-|..|+..++.. .... . ....|.+++..++|+.|.+|+.++-|..
T Consensus 356 ~~~V~~i~~d~--~g~lW-iGt~~~Gl~~~~~~~~~~-~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~ 431 (795)
T 4a2l_A 356 DNVVSCIVEDK--DKNLW-IGTNDGGLNLYNPITQRF-TSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSI 431 (795)
T ss_dssp CSSEEEEEECT--TSCEE-EEESSSCEEEECTTTCCE-EEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEE
T ss_pred CCeeEEEEECC--CCCEE-EEECCCCeEEEcCCCCcE-EEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeE
Confidence 45699999988 77654 466776788899776532 2221 1 2356899999988885677778788999
Q ss_pred EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108 118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK 197 (703)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~ 197 (703)
+|.++++... +..... ......|.++...++|+..+.. . +-+.+||..+++... +.....
T Consensus 432 ~d~~~~~~~~-~~~~~~---------------~l~~~~v~~i~~d~~g~lwigt-~-~Gl~~~~~~~~~~~~-~~~~~~- 491 (795)
T 4a2l_A 432 LHRNSGQVEN-FNQRNS---------------QLVNENVYAILPDGEGNLWLGT-L-SALVRFNPEQRSFTT-IEKEKD- 491 (795)
T ss_dssp EETTTCCEEE-ECTTTS---------------CCSCSCEEEEEECSSSCEEEEE-S-SCEEEEETTTTEEEE-CCBCTT-
T ss_pred EeCCCCcEEE-eecCCC---------------CcCCCeeEEEEECCCCCEEEEe-c-CceeEEeCCCCeEEE-cccccc-
Confidence 9998876433 221100 0123479999999988865544 4 458899988765432 211100
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-------CCccceEEEEEcCCCCEEEEEe
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-------KPEVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-------~h~~~V~~l~~spdg~~l~s~s 270 (703)
...-....|.++...++|...+.+. .| +..||..+++. .+. .+...|.++..+++|+..++..
T Consensus 492 ~~~~~~~~i~~i~~d~~g~lWigt~-~G-------l~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lWigT~ 561 (795)
T 4a2l_A 492 GTPVVSKQITTLFRDSHKRLWIGGE-EG-------LSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIWVGTR 561 (795)
T ss_dssp CCBCCCCCEEEEEECTTCCEEEEES-SC-------EEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEEEEES
T ss_pred ccccCCceEEEEEECCCCCEEEEeC-Cc-------eEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEEEEeC
Confidence 0001124678888888888666544 33 66777665543 111 1245689999999998666544
Q ss_pred CCCEEEEEcCCCc
Q psy7108 271 TEGVHIYSLDSGY 283 (703)
Q Consensus 271 ~Dgv~iwd~~~~~ 283 (703)
.|+..|+..+++
T Consensus 562 -~Gl~~~d~~~~~ 573 (795)
T 4a2l_A 562 -EGFYCFNEKDKQ 573 (795)
T ss_dssp -SCEEEEETTTTE
T ss_pred -CCceeECCCCCc
Confidence 489999987654
No 260
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=97.67 E-value=0.005 Score=63.18 Aligned_cols=198 Identities=13% Similarity=0.054 Sum_probs=114.4
Q ss_pred CeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-----CCCcEEEEEEec-CCCEEEEEEC-----------
Q psy7108 49 PVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-----LLSDALCVAYKP-DGTEIVVATL----------- 111 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-----~~~~V~~v~~sp-dg~~las~s~----------- 111 (703)
...++++.+ ++..|+.+...+.+..+|..++. ...+.. .......+++.+ +|+..++-..
T Consensus 81 ~p~gi~~~~--~~g~l~v~d~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~ 157 (322)
T 2fp8_A 81 RTYDISYNL--QNNQLYIVDCYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQI 157 (322)
T ss_dssp CEEEEEEET--TTTEEEEEETTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHH
T ss_pred CCceEEEcC--CCCcEEEEECCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCccccccccccee
Confidence 578899997 44556666555558888865442 222221 113478899999 9986665432
Q ss_pred ------CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECCC
Q psy7108 112 ------DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSRE 184 (703)
Q Consensus 112 ------dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~~ 184 (703)
++.|..+|..+++.......-. ....++++|+|+.|.++ +..+.|..||+..
T Consensus 158 ~~~~~~~g~v~~~d~~~~~~~~~~~~~~---------------------~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~ 216 (322)
T 2fp8_A 158 MDTSDKTGRLIKYDPSTKETTLLLKELH---------------------VPGGAEVSADSSFVLVAEFLSHQIVKYWLEG 216 (322)
T ss_dssp HHHTCCCEEEEEEETTTTEEEEEEEEES---------------------CCCEEEECTTSSEEEEEEGGGTEEEEEESSS
T ss_pred hcccCCCceEEEEeCCCCEEEEeccCCc---------------------cCcceEECCCCCEEEEEeCCCCeEEEEECCC
Confidence 3678889987776433322211 24569999999876665 5567899999875
Q ss_pred Cc--eEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC----CCeeEEECCCCCCCccceeecCCc----cce
Q psy7108 185 GI--LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE----GGNVVLKLPGVKKGDMAARVLKPE----VRV 254 (703)
Q Consensus 185 ~~--~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~----~~~~~i~iwd~~~~~~~~~~~~h~----~~V 254 (703)
.. ....+.. ..+ ...+++.++|+..++....... .....|..+|.. ++....+.... ..+
T Consensus 217 ~~~~~~~~~~~-----~~g----P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~~~~~~ 286 (322)
T 2fp8_A 217 PKKGTAEVLVK-----IPN----PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPFAGEHF 286 (322)
T ss_dssp TTTTCEEEEEE-----CSS----EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTTTTSCC
T ss_pred CcCCccceEEe-----CCC----CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCCccccc
Confidence 32 1222221 111 4568999999865554331000 001357777764 55555444332 346
Q ss_pred EEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 255 FCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 255 ~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
.++++ .+++.+++...++ |.+++++.
T Consensus 287 ~~~~~-~~g~L~v~~~~~~~i~~~~~~~ 313 (322)
T 2fp8_A 287 EQIQE-HDGLLYIGTLFHGSVGILVYDK 313 (322)
T ss_dssp CEEEE-ETTEEEEECSSCSEEEEEEC--
T ss_pred eEEEE-eCCEEEEeecCCCceEEEeccc
Confidence 66666 3554444444455 88888753
No 261
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=97.64 E-value=0.017 Score=67.41 Aligned_cols=207 Identities=10% Similarity=0.120 Sum_probs=130.8
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec-------CCCcEEEEEEecCCCEEEEEECCCeEEEEE
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ-------LLSDALCVAYKPDGTEIVVATLDGQLIMFD 119 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~-------~~~~V~~v~~spdg~~las~s~dg~I~vwd 119 (703)
...|.++...+ +|.+- .|+.++-|..++..+.. ...... ....|.++...++|.. -.|+.++-|..||
T Consensus 309 ~~~i~~i~~D~--~g~lW-igt~~~Gl~~~~~~~~~-~~~~~~~~~~~~l~~~~V~~i~~d~~g~l-WiGt~~~Gl~~~~ 383 (795)
T 4a2l_A 309 QRSVRSIFMDS--QGGMW-LGTYFGGLNYYHPIRNR-FKNIRNIPYKNSLSDNVVSCIVEDKDKNL-WIGTNDGGLNLYN 383 (795)
T ss_dssp SSCEEEEEECT--TSCEE-EEESSSCEEEECGGGGS-SEEECCCTTSSSCSCSSEEEEEECTTSCE-EEEESSSCEEEEC
T ss_pred CCcEEEEEEeC--CcCEE-EEECCCCeEEeCCCccc-ceEEcCCCCCCCCCCCeeEEEEECCCCCE-EEEECCCCeEEEc
Confidence 36799999998 77644 56666778888865442 111111 2346999999888874 4567777899999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhc-ccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCc
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQ-SLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
..+++.......... .. ......|.+++..++|+.|..|+.++-|..||..+++.. .+..... .
T Consensus 384 ~~~~~~~~~~~~~~~-------------~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~-~ 448 (795)
T 4a2l_A 384 PITQRFTSYTLQEDE-------------SARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHRNSGQVE-NFNQRNS-Q 448 (795)
T ss_dssp TTTCCEEEECCC-------------------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEETTTCCEE-EECTTTS-C
T ss_pred CCCCcEEEEecCCCC-------------cccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeCCCCcEE-EeecCCC-C
Confidence 887654332211100 00 011247999999999985666777677999999887643 3321111 0
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec------CCccceEEEEEcCCCCEEEEEeCC
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL------KPEVRVFCVKFSPTGQAWVAATTE 272 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~------~h~~~V~~l~~spdg~~l~s~s~D 272 (703)
.....|.++...++|...+.+. .| +.+||..+++...... -....|.++...++|+..+... +
T Consensus 449 --l~~~~v~~i~~d~~g~lwigt~-~G-------l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~-~ 517 (795)
T 4a2l_A 449 --LVNENVYAILPDGEGNLWLGTL-SA-------LVRFNPEQRSFTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE-E 517 (795)
T ss_dssp --CSCSCEEEEEECSSSCEEEEES-SC-------EEEEETTTTEEEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES-S
T ss_pred --cCCCeeEEEEECCCCCEEEEec-Cc-------eeEEeCCCCeEEEccccccccccCCceEEEEEECCCCCEEEEeC-C
Confidence 1224678888888888655543 33 7777776654332211 1235689999999998766555 7
Q ss_pred CEEEEEcCCCce
Q psy7108 273 GVHIYSLDSGYV 284 (703)
Q Consensus 273 gv~iwd~~~~~~ 284 (703)
|+..|+..++..
T Consensus 518 Gl~~~~~~~~~~ 529 (795)
T 4a2l_A 518 GLSVFKQEGLDI 529 (795)
T ss_dssp CEEEEEEETTEE
T ss_pred ceEEEeCCCCeE
Confidence 799999876653
No 262
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=97.60 E-value=0.011 Score=60.74 Aligned_cols=201 Identities=7% Similarity=-0.034 Sum_probs=118.4
Q ss_pred cCeEEEEEcCCCCCCEE-EEEeCCCcEEEEEcCCCceeEE-EecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCc
Q psy7108 48 GPVSCIEFSPVLSSTGM-VSASWDKTVKLWNAVETDTQHE-TIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAA 124 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L-~sgs~Dg~V~iWd~~~~~~~~~-~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~ 124 (703)
....+++|++ .+..| .+-...+.|..++......... ....-.....+++.+.+..|+.+ ...+.|.+++++...
T Consensus 35 ~~~~~ld~d~--~~~~lyw~D~~~~~I~r~~~~g~~~~~~~~~~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~ 112 (318)
T 3sov_A 35 EDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDGSL 112 (318)
T ss_dssp EEEEEEEEEG--GGTEEEEEETTTTEEEEEETTSSSCCCEEEEECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS
T ss_pred CccEEEEEEe--CCCEEEEEECCCCcEEEEEccCCCceEEEEcCCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCCCc
Confidence 4567899998 54544 4545667888899876532222 22233456788998766555544 456789999987543
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
....+... ......+++.|.+..|..+. ..+.|...++..... ..+... .
T Consensus 113 ~~~l~~~~--------------------~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~-~~~~~~-~------ 164 (318)
T 3sov_A 113 RKVLFWQE--------------------LDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINS-E------ 164 (318)
T ss_dssp CEEEECSS--------------------CSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC-EEEECS-S------
T ss_pred EEEEEeCC--------------------CCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe-EEEEEC-C------
Confidence 32222211 12567899999766666654 256788888764332 222111 1
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEe-CCC-EEEEEcC
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAAT-TEG-VHIYSLD 280 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s-~Dg-v~iwd~~ 280 (703)
....+.+++++++..++++.... ..|..+|..................++++.. ..++.+. ..+ |..++..
T Consensus 165 l~~Pnglavd~~~~~lY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~P~glav~~--~~lywtd~~~~~V~~~~~~ 237 (318)
T 3sov_A 165 IYWPNGLTLDYEEQKLYWADAKL-----NFIHKSNLDGTNRQAVVKGSLPHPFALTLFE--DILYWTDWSTHSILACNKY 237 (318)
T ss_dssp CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEECSCCSCEEEEEEET--TEEEEEETTTTEEEEEETT
T ss_pred CCCccEEEEeccCCEEEEEECCC-----CEEEEEcCCCCceEEEecCCCCCceEEEEeC--CEEEEEecCCCeEEEEECC
Confidence 12457899999777766654332 3677777654322222222334566777753 3444334 344 8888987
Q ss_pred CCcee
Q psy7108 281 SGYVF 285 (703)
Q Consensus 281 ~~~~~ 285 (703)
+|+..
T Consensus 238 ~G~~~ 242 (318)
T 3sov_A 238 TGEGL 242 (318)
T ss_dssp TCCSC
T ss_pred CCCce
Confidence 77653
No 263
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=97.57 E-value=0.019 Score=58.32 Aligned_cols=211 Identities=11% Similarity=0.007 Sum_probs=115.9
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCCC--cEEEEEcCCCceeEEEec--CCCcEEEEEEecCC
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWDK--TVKLWNAVETDTQHETIQ--LLSDALCVAYKPDG 103 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg--~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg 103 (703)
+..+|.+++.. ..+. -.....++++++ +|+++++..... .|..++..+++. ..+.. .......++..+++
T Consensus 55 I~~~d~~g~~~--~~~~-~~~~p~gia~~~--dG~l~vad~~~~~~~v~~~d~~~g~~-~~~~~~~~~~~~~g~~~~~~~ 128 (306)
T 2p4o_A 55 IVSITPDGNQQ--IHAT-VEGKVSGLAFTS--NGDLVATGWNADSIPVVSLVKSDGTV-ETLLTLPDAIFLNGITPLSDT 128 (306)
T ss_dssp EEEECTTCCEE--EEEE-CSSEEEEEEECT--TSCEEEEEECTTSCEEEEEECTTSCE-EEEEECTTCSCEEEEEESSSS
T ss_pred EEEECCCCceE--EEEe-CCCCceeEEEcC--CCcEEEEeccCCcceEEEEcCCCCeE-EEEEeCCCccccCcccccCCC
Confidence 44456666654 3333 234688999999 898766654332 355566666643 32222 22233455555555
Q ss_pred CEEEEEECCCeEEEEEcCCCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEE
Q psy7108 104 TEIVVATLDGQLIMFDVESAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYS 181 (703)
Q Consensus 104 ~~las~s~dg~I~vwd~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD 181 (703)
..+++-..++.|+++|..+++. +...... ..... ..........+ +||++.|.++. ..+.|..+|
T Consensus 129 ~~~v~d~~~g~i~~~d~~~~~~~v~~~~~~--~~~~~---------~~~~~~~pngi--s~dg~~lyv~d~~~~~I~~~~ 195 (306)
T 2p4o_A 129 QYLTADSYRGAIWLIDVVQPSGSIWLEHPM--LARSN---------SESVFPAANGL--KRFGNFLYVSNTEKMLLLRIP 195 (306)
T ss_dssp EEEEEETTTTEEEEEETTTTEEEEEEECGG--GSCSS---------TTCCSCSEEEE--EEETTEEEEEETTTTEEEEEE
T ss_pred cEEEEECCCCeEEEEeCCCCcEeEEEECCc--ccccc---------ccCCCCcCCCc--CcCCCEEEEEeCCCCEEEEEE
Confidence 4444444588999999876532 2111111 00000 00001133445 78888776654 567899999
Q ss_pred CCC-Cce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEE
Q psy7108 182 SRE-GIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFC 256 (703)
Q Consensus 182 ~~~-~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~ 256 (703)
+.. ++. ...+.. . .....++++++|+.+++.... ..|.++|.. ++... .....-...++
T Consensus 196 ~~~~g~~~~~~~~~~-~--------~~P~gi~vd~dG~l~va~~~~------~~V~~~~~~-G~~~~~~~~~~~~~~p~~ 259 (306)
T 2p4o_A 196 VDSTDKPGEPEIFVE-Q--------TNIDDFAFDVEGNLYGATHIY------NSVVRIAPD-RSTTIIAQAEQGVIGSTA 259 (306)
T ss_dssp BCTTSCBCCCEEEEE-S--------CCCSSEEEBTTCCEEEECBTT------CCEEEECTT-CCEEEEECGGGTCTTEEE
T ss_pred eCCCCCCCccEEEec-c--------CCCCCeEECCCCCEEEEeCCC------CeEEEECCC-CCEEEEeecccccCCceE
Confidence 875 321 111110 0 134568999999865554332 257888865 54422 22223356889
Q ss_pred EEEc---CCCCEEEEEeCCC
Q psy7108 257 VKFS---PTGQAWVAATTEG 273 (703)
Q Consensus 257 l~~s---pdg~~l~s~s~Dg 273 (703)
++|. |+++.|+.++..+
T Consensus 260 ~a~~g~~~d~~~LyVt~~~~ 279 (306)
T 2p4o_A 260 VAFGQTEGDCTAIYVVTNGG 279 (306)
T ss_dssp EEECCSTTTTTEEEEEECTT
T ss_pred EEEecccCCCCEEEEECCCC
Confidence 9998 8988876665544
No 264
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.57 E-value=0.011 Score=63.61 Aligned_cols=134 Identities=9% Similarity=0.048 Sum_probs=79.5
Q ss_pred ceeeccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeC-CC----cEEEEEcCCCceeEEEecCCCcEEEEEEec-
Q psy7108 28 VKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASW-DK----TVKLWNAVETDTQHETIQLLSDALCVAYKP- 101 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~-Dg----~V~iWd~~~~~~~~~~~~~~~~V~~v~~sp- 101 (703)
+...|..+..+ ..+.........++|++ +++.|+.+.. ++ .+...+....-..............++++|
T Consensus 161 I~~id~~~~~v--~~~~~~~~~P~~ia~d~--~G~~lyvad~~~~~~~~~v~~~~~~g~~~~~~~l~~~~~p~giavdp~ 236 (430)
T 3tc9_A 161 TRLIDFEKEYV--STVYSGLSKVRTICWTH--EADSMIITNDQNNNDRPNNYILTRESGFKVITELTKGQNCNGAETHPI 236 (430)
T ss_dssp EEEEETTTTEE--EEEECCCSCEEEEEECT--TSSEEEEEECCSCTTSEEEEEEEGGGTSCSEEEEEECSSCCCEEECTT
T ss_pred EEEEECCCCEE--EEEecCCCCcceEEEeC--CCCEEEEEeCCCCcccceEEEEeCCCceeeeeeeccCCCceEEEEeCC
Confidence 44456555544 44444556688999999 9996655543 22 233334322211112222234457788999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEE
Q psy7108 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIY 180 (703)
Q Consensus 102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lw 180 (703)
+|..+++-..++.|..++.+++.......... ......++|+|+|++|..+ ...+.|..+
T Consensus 237 ~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~-------------------~~~P~gia~~pdG~~lyv~d~~~~~I~~~ 297 (430)
T 3tc9_A 237 NGELYFNSWNAGQVFRYDFTTQETTPLFTIQD-------------------SGWEFHIQFHPSGNYAYIVVVNQHYILRS 297 (430)
T ss_dssp TCCEEEEETTTTEEEEEETTTTEEEEEEECSS-------------------SSCCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCEEEEEECCCCEEEEEECCCCcEEEEEEcCC-------------------CCcceeEEEcCCCCEEEEEECCCCEEEEE
Confidence 66666665567899999998765432222111 1135689999999965554 456789998
Q ss_pred ECCC
Q psy7108 181 SSRE 184 (703)
Q Consensus 181 D~~~ 184 (703)
+...
T Consensus 298 ~~d~ 301 (430)
T 3tc9_A 298 DYDW 301 (430)
T ss_dssp EEET
T ss_pred eCCc
Confidence 7653
No 265
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.57 E-value=0.00083 Score=77.96 Aligned_cols=156 Identities=10% Similarity=0.072 Sum_probs=97.3
Q ss_pred cEEEEEEe-cCCCEEEEEEC-CC----eEEEEEcCCC-cEEE-EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC
Q psy7108 93 DALCVAYK-PDGTEIVVATL-DG----QLIMFDVESA-AQVG-SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD 164 (703)
Q Consensus 93 ~V~~v~~s-pdg~~las~s~-dg----~I~vwd~~~~-~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd 164 (703)
.+...+|| |||++||.+.. +| +|+++|+.++ +.+. .+.. ....++|+||
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~~~~~-----------------------~~~~~~WspD 231 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDMSGNEVYTIEFKRISDPSQTIADKVSG-----------------------TNGEIVWGPD 231 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEESSSSSCEEEEEEETTCTTCCCCCCEEE-----------------------ECSCCEECSS
T ss_pred EEeeeEecCCCCCEEEEEEeCCCCceEEEEEEECCCCCEeCCccccC-----------------------ceeeEEEecC
Confidence 57789999 99999886654 22 4999999988 5321 0110 1235789999
Q ss_pred CCEEEEEecC-----CcEEEEECCCCce--EEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCC
Q psy7108 165 GSCILAAGQS-----KYICIYSSREGIL--LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPG 237 (703)
Q Consensus 165 g~~l~s~s~d-----g~I~lwD~~~~~~--~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd 237 (703)
|+.|+....| ..|+.+++.++.. ...+.... .....++.|||||+++++..... ....+.++|
T Consensus 232 g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv~~~~~-------~~~~~~~~~SpDg~~l~~~~~~~---~~~~l~~~d 301 (751)
T 2xe4_A 232 HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCLYEEHN-------PLFSAFMYKAADTNTLCIGSQSP---ETAEVHLLD 301 (751)
T ss_dssp TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEEEECCC-------TTCEEEEEECTTSSEEEEEEECS---SCEEEEEEE
T ss_pred CCEEEEEEECCCCCCCEEEEEECCCCchhcEEEEecCC-------CceEEEEEECCCCCEEEEEecCC---CCceEEEEE
Confidence 9988877655 3588888887642 23332211 12446789999999988877543 235788889
Q ss_pred CCCCc--c--ceeecCCccceEEEEEcCCCCEEEEEeCC--C---EEEEEcCC
Q psy7108 238 VKKGD--M--AARVLKPEVRVFCVKFSPTGQAWVAATTE--G---VHIYSLDS 281 (703)
Q Consensus 238 ~~~~~--~--~~~~~~h~~~V~~l~~spdg~~l~s~s~D--g---v~iwd~~~ 281 (703)
+.++. . ............++.|+.++.+++....+ + |..+++.+
T Consensus 302 ~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~ 354 (751)
T 2xe4_A 302 LRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQ 354 (751)
T ss_dssp SSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTS
T ss_pred CCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCC
Confidence 88752 2 22223344455666655444444555444 2 66667654
No 266
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=97.53 E-value=0.033 Score=64.40 Aligned_cols=207 Identities=7% Similarity=-0.055 Sum_probs=121.3
Q ss_pred cccCCCcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCc---eeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeE
Q psy7108 42 VLSGHEGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETD---TQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQL 115 (703)
Q Consensus 42 ~l~gH~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~---~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I 115 (703)
.+......+.+++|++ ....|+ +-...+.|+.+++.... ....+.. .......+++.+.+..|+.+. ..+.|
T Consensus 418 ~l~~~~~~~~gl~~d~--~~~~lY~sD~~~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I 495 (791)
T 3m0c_C 418 SLIPNLRNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTV 495 (791)
T ss_dssp EEECSCSSEEEEEEET--TTTEEEEEETTTTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEE
T ss_pred eeecCCCceEEEeecc--cCCeeEEeeccceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeE
Confidence 3334456678999998 555554 54556788888886531 1222333 345667899998887666554 46789
Q ss_pred EEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEe
Q psy7108 116 IMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTI 193 (703)
Q Consensus 116 ~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~ 193 (703)
.+.+++.......+.... .....|+++|.+..|+.+.. .+.|...++..... ..+..
T Consensus 496 ~v~~ldG~~~~~l~~~~l--------------------~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG~~~-~~lv~ 554 (791)
T 3m0c_C 496 SVADTKGVKRKTLFRENG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVT 554 (791)
T ss_dssp EEEETTSSSEEEEEECTT--------------------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCCE-EEEEC
T ss_pred EEEeCCCCeEEEEEeCCC--------------------CCcceEEEecCCCCEEEecCCCCCeEEEEecCCCce-EEEEe
Confidence 999987554433333221 15789999998666666543 26799999875433 33321
Q ss_pred ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC--ccceEEEEEcCCCCEEEEEeC
Q psy7108 194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP--EVRVFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h--~~~V~~l~~spdg~~l~s~s~ 271 (703)
.. ....+.+++++.+..++++.... ..|...++............ -....+|++. +..|+.+..
T Consensus 555 ~~-------l~~P~GLavD~~~~~LYwaD~~~-----~~I~~~d~dG~~~~~v~~~~~~l~~P~glav~--~~~lYwtD~ 620 (791)
T 3m0c_C 555 EN-------IQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSLAVF--EDKVFWTDI 620 (791)
T ss_dssp SS-------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSCEEEEECTTTTSSEEEEEEE--TTEEEEEET
T ss_pred CC-------CCCceEEEEecCCCeEEEEeCCC-----CcEEEEecCCCceEEEecCCCccCCCCEEEEe--CCEEEEEEC
Confidence 11 12567899998777776654321 36777776544332222221 1234466653 446665554
Q ss_pred CC--EEEEEcCCCcee
Q psy7108 272 EG--VHIYSLDSGYVF 285 (703)
Q Consensus 272 Dg--v~iwd~~~~~~~ 285 (703)
.. |...+..+|+..
T Consensus 621 ~~~~I~~~dk~tG~~~ 636 (791)
T 3m0c_C 621 INEAIFSANRLTGSDV 636 (791)
T ss_dssp TTTEEEEEETTTCCCC
T ss_pred CCCEEEEEeCCCCcce
Confidence 44 777776666543
No 267
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.51 E-value=0.013 Score=62.89 Aligned_cols=195 Identities=12% Similarity=0.078 Sum_probs=110.8
Q ss_pred CeEEEEEcCCCC--CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCC-----eEEEEEcC
Q psy7108 49 PVSCIEFSPVLS--STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDG-----QLIMFDVE 121 (703)
Q Consensus 49 ~V~~l~~sp~~d--g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg-----~I~vwd~~ 121 (703)
.-.+++|+| + +..|+.+...+.|+.+|..++ .+..+........+++++++|+ |+++...+ .+...+..
T Consensus 140 ~P~gvavd~--~s~~g~Lyv~D~~~~I~~id~~~g-~v~~~~~~~~~P~giavd~dG~-lyVad~~~~~~~~gv~~~~~~ 215 (433)
T 4hw6_A 140 NIWRMMFDP--NSNYDDLYWVGQRDAFRHVDFVNQ-YVDIKTTNIGQCADVNFTLNGD-MVVVDDQSSDTNTGIYLFTRA 215 (433)
T ss_dssp CCCEEEECT--TTTTCEEEEECBTSCEEEEETTTT-EEEEECCCCSCEEEEEECTTCC-EEEEECCSCTTSEEEEEECGG
T ss_pred CCceEEEcc--ccCCCEEEEEeCCCCEEEEECCCC-EEEEeecCCCCccEEEECCCCC-EEEEcCCCCcccceEEEEECC
Confidence 356899998 5 344555544488999998766 4455555556689999999999 55554322 12223222
Q ss_pred CCcE-EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCCcEEEEECCCCceEEEEEeccCCcc
Q psy7108 122 SAAQ-VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSKYICIYSSREGILLKKFTITQNKSL 199 (703)
Q Consensus 122 ~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~ 199 (703)
.+.. ...+.. ......++++| +|...++-..++.|+.+|..++.....+.....
T Consensus 216 ~~~~~~~~~~~---------------------~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~--- 271 (433)
T 4hw6_A 216 SGFTERLSLCN---------------------ARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT--- 271 (433)
T ss_dssp GTTCCEEEEEE---------------------CSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCEEEEEEECSC---
T ss_pred CCeeccccccc---------------------cCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeEEEEEeccCC---
Confidence 1110 001110 11345688999 666655555678899999987766333321111
Q ss_pred ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC--CCccc--eeecCC---------------ccceEEEEE-
Q psy7108 200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK--KGDMA--ARVLKP---------------EVRVFCVKF- 259 (703)
Q Consensus 200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~--~~~~~--~~~~~h---------------~~~V~~l~~- 259 (703)
...-..++++|+|+.++++.... ..|..++.. ++... ..+.+. -.....+++
T Consensus 272 ---~~~~~~ia~dpdG~~LYvad~~~-----~~I~~~~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~ 343 (433)
T 4hw6_A 272 ---KGSNFHIVWHPTGDWAYIIYNGK-----HCIYRVDYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFV 343 (433)
T ss_dssp ---CSSCEEEEECTTSSEEEEEETTT-----TEEEEEEBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEE
T ss_pred ---CCCcccEEEeCCCCEEEEEeCCC-----CEEEEEeCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEE
Confidence 01224699999999666554432 367775433 33211 111110 123667898
Q ss_pred --------cCCCCEEEEEeCCC-EEEEEc
Q psy7108 260 --------SPTGQAWVAATTEG-VHIYSL 279 (703)
Q Consensus 260 --------spdg~~l~s~s~Dg-v~iwd~ 279 (703)
.++|+..++-.... |+.++.
T Consensus 344 ~n~~y~~dd~~g~lyvaD~~n~~I~~~~~ 372 (433)
T 4hw6_A 344 KNEAYAGEEDEYDFYFCDRDSHTVRVLTP 372 (433)
T ss_dssp ECGGGTTSSCCEEEEEEETTTTEEEEECT
T ss_pred ccccccccCCCCcEEEEECCCCEEEEECC
Confidence 66676555555555 888874
No 268
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.50 E-value=0.0042 Score=70.89 Aligned_cols=208 Identities=15% Similarity=0.134 Sum_probs=128.1
Q ss_pred CCcEEEEEcCCCceeEEEecCC---C----------------------------cEEEEEEecCCCEEEEEECCC-----
Q psy7108 70 DKTVKLWNAVETDTQHETIQLL---S----------------------------DALCVAYKPDGTEIVVATLDG----- 113 (703)
Q Consensus 70 Dg~V~iWd~~~~~~~~~~~~~~---~----------------------------~V~~v~~spdg~~las~s~dg----- 113 (703)
+|.|..+|..+++......... . ....++++|++..++.++.++
T Consensus 177 ~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~ 256 (668)
T 1kv9_A 177 RGFVSAYDADTGKLAWRFYTVPGDPALPYEHPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNR 256 (668)
T ss_dssp BCEEEEEETTTCCEEEEEESSCCCTTSCCSSHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCH
T ss_pred CCEEEEEECCCCcEEEEecccCCCCCccccccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCcccc
Confidence 5889999999998766554211 0 012468888888888887766
Q ss_pred --------------eEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCC---EEEEEecCCc
Q psy7108 114 --------------QLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGS---CILAAGQSKY 176 (703)
Q Consensus 114 --------------~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~---~l~s~s~dg~ 176 (703)
.|..+|.++|+.+-.++....-. ...+ ...+.....+..+|+ .++.++.+|.
T Consensus 257 ~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~~~~~~~~---wd~~--------~~~~~~~~d~~~~G~~~~~v~~~~~~G~ 325 (668)
T 1kv9_A 257 EVRSPGGGDNLYLSSILAIRPDTGKLAWHYQVTPGDS---WDFT--------ATQQITLAELNIDGKPRKVLMQAPKNGF 325 (668)
T ss_dssp HHHSTTCCCCTTTTEEEEECTTTCCEEEEEESSTTCC---SCCC--------CCSCEEEEEEEETTEEEEEEEECCTTSE
T ss_pred CCCCCCCCCceeeeeEEEEcCCCCceeeEeecCCCcc---cccc--------CCCCcEEEEeccCCcEEEEEEEECCCCE
Confidence 39999999999987776421100 0000 001222223334665 6888999999
Q ss_pred EEEEECCCCceEEEEEeccC-----------Ccc-------ccc-----c-----ccceeeeeccCCCEEEEEccc----
Q psy7108 177 ICIYSSREGILLKKFTITQN-----------KSL-------DGI-----N-----DFINRRKMTEFGNVSLIETRE---- 224 (703)
Q Consensus 177 I~lwD~~~~~~~~~~~~~~~-----------~~~-------~~~-----~-----~~v~~~~~spdg~~l~~~~~~---- 224 (703)
++++|.++|+.+........ ... .+. . ..-..++++|+...+++...+
T Consensus 326 l~~lD~~tG~~l~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~p~~~G~~~w~~~a~dp~~g~~yv~~~~~~~~ 405 (668)
T 1kv9_A 326 FYVLDRTNGKLISAEKFGKVTWAEKVDLATGRPVEAPGVRYEKEPIVMWPSPFGAHNWHSMSFNPGTGLVYIPYQEVPGV 405 (668)
T ss_dssp EEEEETTTCCEEEEEESSCCCSEEEECTTTCCEEECTTTTCSSSCEEESSCTTCSSCSSCCEEETTTTEEEEEEEECCEE
T ss_pred EEEEECCCCCEeccccccccccccccccccCCccccccccccCCeeEECCCCccccCCCcceECCCCCEEEEeccccceE
Confidence 99999999998855432210 000 000 0 001236788887776653210
Q ss_pred ----------------C----------CCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108 225 ----------------T----------HEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIY 277 (703)
Q Consensus 225 ----------------~----------~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw 277 (703)
+ .......|..||..+++.+-+...+. ......+...+..+++++.|+ ++.|
T Consensus 406 ~~~~~~~~~~~~~~~~g~~~~~~~~~p~~~~~g~l~A~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~vf~g~~dg~l~a~ 484 (668)
T 1kv9_A 406 YRNEGKDFVTRKAFNTAAGFADATDVPAAVVSGALLAWDPVKQKAAWKVPYPT-HWNGGTLSTAGNLVFQGTAAGQMHAY 484 (668)
T ss_dssp ECCCGGGCCCCSSCCCSSCGGGCCCCCGGGCEEEEEEEETTTTEEEEEEEESS-SCCCCEEEETTTEEEEECTTSEEEEE
T ss_pred eeeeccccccccccccCccccccCCCCCCCccceEEEEeCCCCcEEEEccCCC-CCcCceeEeCCCEEEEECCcccchhh
Confidence 0 00012578889999998765554322 223334445677888899999 9999
Q ss_pred EcCCCceeccee
Q psy7108 278 SLDSGYVFDPFL 289 (703)
Q Consensus 278 d~~~~~~~~~~~ 289 (703)
|..+++.+-.+.
T Consensus 485 d~~tG~~l~~~~ 496 (668)
T 1kv9_A 485 SADKGEALWQFE 496 (668)
T ss_dssp ETTTCCEEEEEE
T ss_pred hhhcChhheEec
Confidence 999998875554
No 269
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=97.49 E-value=0.023 Score=59.11 Aligned_cols=198 Identities=6% Similarity=-0.020 Sum_probs=118.3
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQV 126 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~ 126 (703)
+..+|.+..+ ++ +|+.+. .+.|+..++... ....+......+..++|++.+..|+.+. ..+.|..++++.+...
T Consensus 34 d~~~C~~~~~--~~-~ll~~~-~~~I~~i~~~g~-~~~~~~~~~~~~~~l~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~ 108 (349)
T 3v64_C 34 DRRSCKALGP--EP-VLLFAN-RIDIRQVLPHRS-EYTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVE 108 (349)
T ss_dssp TSSCEEESSS--CC-EEEEEC-BSCEEEECTTSC-CEEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CCCccccccc--Cc-eeEeec-ccceEEEeCCCC-eeEEeecCCCceEEEEEeccccEEEEEeccCCceEEEecCCCCce
Confidence 3445666555 44 343333 346877787654 3344444555689999998777666554 5678999998866543
Q ss_pred EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108 127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDF 205 (703)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~ 205 (703)
..+.... .....+++.+.+..|.. -...+.|.+.++.......... .. ...
T Consensus 109 ~~~~~~~--------------------~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~~~~l~~-~~-------l~~ 160 (349)
T 3v64_C 109 EVVSTGL--------------------ESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLW-QS-------LEK 160 (349)
T ss_dssp EEECSSC--------------------SCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSCEEEEC-TT-------CSC
T ss_pred EEEeCCC--------------------CCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCceEEEEe-CC-------CCC
Confidence 3332211 13467888876555544 4556789999987543322221 11 124
Q ss_pred ceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108 206 INRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG 282 (703)
Q Consensus 206 v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~ 282 (703)
...++++|.+..++++.... ...|...++............-.....++++|++..|..+.... |..++++..
T Consensus 161 P~~iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~ 235 (349)
T 3v64_C 161 PRAIALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 235 (349)
T ss_dssp EEEEEEETTTTEEEEEECSS----SCEEEEEETTSCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred cceEEEecCcCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 57789999777666654321 12566666553322222222234578999999888876666544 888988753
No 270
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=97.42 E-value=0.039 Score=56.44 Aligned_cols=184 Identities=7% Similarity=-0.043 Sum_probs=109.2
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCC---cE-EEEEeccccCCC
Q psy7108 63 GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESA---AQ-VGSVEARRDLDS 137 (703)
Q Consensus 63 ~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~---~~-~~~~~~~~~~~~ 137 (703)
+|+.+.. ..|+..|+.+.. ...+......+.+++|++++..|+.+. .++.|..+++++. .. ...+...
T Consensus 3 ~ll~~~~-~~I~~i~~~~~~-~~~~~~~~~~p~g~~~d~~~~~ly~~D~~~~~I~~~~~~g~~~~~~~~~~~~~~----- 75 (316)
T 1ijq_A 3 YLFFTNR-HEVRKMTLDRSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD----- 75 (316)
T ss_dssp EEEEECB-SSEEEEETTSCC-CEEEECSCSSEEEEEEETTTTEEEEEETTTTEEEEEEC--------CEEEECSS-----
T ss_pred EEEEECC-CeEEEEECCCcc-eEehhcCCCceEEEEEEeCCCEEEEEECCCCcEEEEECCCCCCCcccEEEEeCC-----
Confidence 3444433 468888987764 334445556788999999776666554 4688999998751 21 1122111
Q ss_pred CCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCC
Q psy7108 138 GRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGN 216 (703)
Q Consensus 138 ~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~ 216 (703)
......+++++.+..|.. -...+.|.+.|+............ ......++++|.+.
T Consensus 76 ---------------~~~p~glavd~~~~~ly~~d~~~~~I~~~~~~g~~~~~~~~~~--------~~~P~~iavdp~~g 132 (316)
T 1ijq_A 76 ---------------IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--------GSKPRAIVVDPVHG 132 (316)
T ss_dssp ---------------CSCCCEEEEETTTTEEEEEETTTTEEEEEETTSSSEEEEEECT--------TCCEEEEEEETTTT
T ss_pred ---------------CCCcCEEEEeecCCeEEEEECCCCEEEEEeCCCCceEEEEECC--------CCCcceEEeCCCCC
Confidence 013467888875555554 456788999998754333222211 12457889999777
Q ss_pred EEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108 217 VSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS 281 (703)
Q Consensus 217 ~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~ 281 (703)
.++++.... ...|...++.. .....+. ..-.....++++|++..|..+.... |..++++.
T Consensus 133 ~ly~~d~~~----~~~I~~~~~dG-~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 133 FMYWTDWGT----PAKIKKGGLNG-VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEECSS----SCEEEEEETTS-CCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred EEEEEccCC----CCeEEEEcCCC-CCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCC
Confidence 666654321 12566655542 2222222 2234578999999888886666543 88999874
No 271
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=97.35 E-value=0.0039 Score=71.13 Aligned_cols=207 Identities=15% Similarity=0.159 Sum_probs=126.4
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEEecCCC----------cE-EEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEE
Q psy7108 61 STGMVSASWDKTVKLWNAVETDTQHETIQLLS----------DA-LCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSV 129 (703)
Q Consensus 61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~----------~V-~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~ 129 (703)
+..++.++.++.|..+|..+++...+...... .+ ..+++ ++..+++++.|+.|..+|..+|+.+-.+
T Consensus 66 ~g~vyv~~~~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~v~v~~~dg~l~alD~~tG~~~W~~ 143 (668)
T 1kv9_A 66 DGVIYTSMSWSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVAL--WGDKVYVGTLDGRLIALDAKTGKAIWSQ 143 (668)
T ss_dssp TTEEEEEEGGGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEE--EBTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCEEEEECCCCeEEEEECCCChhceEECCCCCccccccccccCCccceEE--ECCEEEEEcCCCEEEEEECCCCCEeeee
Confidence 45677777889999999999977655532211 01 11233 3567888889999999999999998777
Q ss_pred eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEeccCCccc---
Q psy7108 130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTITQNKSLD--- 200 (703)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~~~~~~~~--- 200 (703)
......... .....++ + . ++ .+++++. ++.|..+|.++|+.+-++.........
T Consensus 144 ~~~~~~~~~-----------~~~~~P~--v--~-~~-~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~p~~~~~ 206 (668)
T 1kv9_A 144 QTTDPAKPY-----------SITGAPR--V--V-KG-KVIIGNGGAEYGVRGFVSAYDADTGKLAWRFYTVPGDPALPYE 206 (668)
T ss_dssp ECSCTTSSC-----------BCCSCCE--E--E-TT-EEEECCBCTTTCCBCEEEEEETTTCCEEEEEESSCCCTTSCCS
T ss_pred ccCCCCCcc-----------eecCCCE--E--E-CC-EEEEeCCCCCcCCCCEEEEEECCCCcEEEEecccCCCCCcccc
Confidence 653210000 0000111 1 1 33 4555433 589999999999998887642211000
Q ss_pred --------------------cccccceeeeeccCCCEEEEEcccCCC---------CC----eeEEECCCCCCCccceee
Q psy7108 201 --------------------GINDFINRRKMTEFGNVSLIETRETHE---------GG----NVVLKLPGVKKGDMAARV 247 (703)
Q Consensus 201 --------------------~~~~~v~~~~~spdg~~l~~~~~~~~~---------~~----~~~i~iwd~~~~~~~~~~ 247 (703)
+.......++++|++..+++++.++.. .+ ...|.-+|.++|+.+-..
T Consensus 207 ~~~~~~~~~~~~g~~~w~~~~gg~~w~~~a~d~~~~~vy~~~~~g~~w~~~~~~~~~gd~l~~~~v~AlD~~tG~~~W~~ 286 (668)
T 1kv9_A 207 HPELREAAKTWQGDQYWKLGGGGTVWDSMAYDPELDLLYVGTGNGSPWNREVRSPGGGDNLYLSSILAIRPDTGKLAWHY 286 (668)
T ss_dssp SHHHHHHHTTCCSSCHHHHCEECCCCSCEEEETTTTEEEEECCCEESSCHHHHSTTCCCCTTTTEEEEECTTTCCEEEEE
T ss_pred ccccccccccCCccceeeeCCCCccccceEEcCCCCEEEEeCCCCCccccCCCCCCCCCceeeeeEEEEcCCCCceeeEe
Confidence 001112346788888888877654310 00 015888899999877655
Q ss_pred cC--Cc-------cceEEEEEcCCCC---EEEEEeCCC-EEEEEcCCCceec
Q psy7108 248 LK--PE-------VRVFCVKFSPTGQ---AWVAATTEG-VHIYSLDSGYVFD 286 (703)
Q Consensus 248 ~~--h~-------~~V~~l~~spdg~---~l~s~s~Dg-v~iwd~~~~~~~~ 286 (703)
.. |. .++....+..+|+ .++.++.+| ++++|..+|+.+.
T Consensus 287 ~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l~ 338 (668)
T 1kv9_A 287 QVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLIS 338 (668)
T ss_dssp ESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEEE
T ss_pred ecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEec
Confidence 43 22 2222233334665 678888999 9999999998763
No 272
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=97.34 E-value=0.017 Score=62.10 Aligned_cols=222 Identities=10% Similarity=0.068 Sum_probs=116.7
Q ss_pred ceeecc-CCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC---Cc-EEEEEcCCCceeEEEecCCCcEEEEEEec-
Q psy7108 28 VKKGDM-AARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD---KT-VKLWNAVETDTQHETIQLLSDALCVAYKP- 101 (703)
Q Consensus 28 v~~~d~-tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D---g~-V~iWd~~~~~~~~~~~~~~~~V~~v~~sp- 101 (703)
++..+. +++. ..+.+......++++++ +|+++++.... .. +...+...+.........-.....++++|
T Consensus 164 I~~id~~~g~v---~~~~~~~~~P~giavd~--dG~lyVad~~~~~~~~gv~~~~~~~~~~~~~~~~~~~~P~giavd~~ 238 (433)
T 4hw6_A 164 FRHVDFVNQYV---DIKTTNIGQCADVNFTL--NGDMVVVDDQSSDTNTGIYLFTRASGFTERLSLCNARGAKTCAVHPQ 238 (433)
T ss_dssp EEEEETTTTEE---EEECCCCSCEEEEEECT--TCCEEEEECCSCTTSEEEEEECGGGTTCCEEEEEECSSBCCCEECTT
T ss_pred EEEEECCCCEE---EEeecCCCCccEEEECC--CCCEEEEcCCCCcccceEEEEECCCCeeccccccccCCCCEEEEeCC
Confidence 445564 4443 34444455689999999 89855554321 11 22223222211111222234456788999
Q ss_pred CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEE
Q psy7108 102 DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIY 180 (703)
Q Consensus 102 dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lw 180 (703)
+|...++-..++.|+.+|..++.....+..... ...-..++|+|+|+.|..+ ...+.|..+
T Consensus 239 ~G~lyv~d~~~~~V~~~d~~~g~~~~~~~~~~~------------------~~~~~~ia~dpdG~~LYvad~~~~~I~~~ 300 (433)
T 4hw6_A 239 NGKIYYTRYHHAMISSYDPATGTLTEEEVMMDT------------------KGSNFHIVWHPTGDWAYIIYNGKHCIYRV 300 (433)
T ss_dssp TCCEEECBTTCSEEEEECTTTCCEEEEEEECSC------------------CSSCEEEEECTTSSEEEEEETTTTEEEEE
T ss_pred CCeEEEEECCCCEEEEEECCCCeEEEEEeccCC------------------CCCcccEEEeCCCCEEEEEeCCCCEEEEE
Confidence 666555555678899999987766333321110 0022469999999966555 456789998
Q ss_pred ECC--CCce--EEEEEeccCC--cccc-----ccccceeeee---------ccCCCEEEEEcccCCCCCeeEEECCCCCC
Q psy7108 181 SSR--EGIL--LKKFTITQNK--SLDG-----INDFINRRKM---------TEFGNVSLIETRETHEGGNVVLKLPGVKK 240 (703)
Q Consensus 181 D~~--~~~~--~~~~~~~~~~--~~~~-----~~~~v~~~~~---------spdg~~l~~~~~~~~~~~~~~i~iwd~~~ 240 (703)
|.. ++.. ...+.+.... ..++ .......+++ .++|..+++.... ..|+.++. +
T Consensus 301 ~~d~~~~~~~~~~~~ag~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n------~~I~~~~~-~ 373 (433)
T 4hw6_A 301 DYNRETGKLAVPYIVCGQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDS------HTVRVLTP-E 373 (433)
T ss_dssp EBCTTTCCBCCCEEEEECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTT------TEEEEECT-T
T ss_pred eCCCCCcccCcEEEEEecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCC------CEEEEECC-C
Confidence 865 3321 1233332110 0011 1123456788 6666666654443 36777774 3
Q ss_pred CccceeecCC------------------ccceEEEEEc-CCCCEEEEEeCCC-EEEEEcC
Q psy7108 241 GDMAARVLKP------------------EVRVFCVKFS-PTGQAWVAATTEG-VHIYSLD 280 (703)
Q Consensus 241 ~~~~~~~~~h------------------~~~V~~l~~s-pdg~~l~s~s~Dg-v~iwd~~ 280 (703)
|... .+.+. -.....++++ ++|..+++-..+. |+.++++
T Consensus 374 G~v~-t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 374 GRVT-TYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp SEEE-EEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred CCEE-EEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 4222 22111 1236788998 4555444444444 7776653
No 273
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=97.30 E-value=0.014 Score=65.28 Aligned_cols=216 Identities=9% Similarity=0.021 Sum_probs=128.6
Q ss_pred CEEEEEeC------CCcEEEEEcCCCceeEEEecCCCc-------------------------------------E-EEE
Q psy7108 62 TGMVSASW------DKTVKLWNAVETDTQHETIQLLSD-------------------------------------A-LCV 97 (703)
Q Consensus 62 ~~L~sgs~------Dg~V~iWd~~~~~~~~~~~~~~~~-------------------------------------V-~~v 97 (703)
..++.++. ++.|..+|..+++...+....... + ..+
T Consensus 161 g~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~~~~~~~~~~~~p~~~~~~~~~G~~~~g~~~w~~~~~~~gg~~~w~~~ 240 (571)
T 2ad6_A 161 DTVLMGCSGAELGVRGAVNAFDLKTGELKWRAFATGSDDSVRLAKDFNSANPHYGQFGLGTKTWEGDAWKIGGGTNWGWY 240 (571)
T ss_dssp TEEEEECBCGGGTCCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCSSHHHHTSSTTGGGGCCCCCCSCC
T ss_pred CEEEEEecCCccCCCCEEEEEECCCCcEEEEEccCCCccccccCcccccccccccccccccccCcccceecCCCCeeeeE
Confidence 35555544 789999999999776554432110 0 135
Q ss_pred EEecCCCEEEEEECC----------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE
Q psy7108 98 AYKPDGTEIVVATLD----------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY 161 (703)
Q Consensus 98 ~~spdg~~las~s~d----------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~ 161 (703)
++.++...++.++.+ +.|..+|.++|+.+-.++....- .+ .......++. +..
T Consensus 241 a~d~~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d--------~~--d~~~~~~p~l-~~~ 309 (571)
T 2ad6_A 241 AYDPKLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHD--------EW--DFAGVNQMVL-TDQ 309 (571)
T ss_dssp EEETTTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTC--------SS--CCCCCCCCEE-EEE
T ss_pred EEcCCCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCc--------cc--ccccCCCCEE-Eec
Confidence 677777777766532 35999999999988776643110 00 0000011222 222
Q ss_pred cCCCC---EEEEEecCCcEEEEECCCCceEEEEEeccCCc----cc---cc-------------cc-----------cce
Q psy7108 162 SADGS---CILAAGQSKYICIYSSREGILLKKFTITQNKS----LD---GI-------------ND-----------FIN 207 (703)
Q Consensus 162 spdg~---~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~----~~---~~-------------~~-----------~v~ 207 (703)
.++|+ .++.++.+|.+.++|.++++.+..+....... ++ +. .. .-.
T Consensus 310 ~~~G~~~~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~ 389 (571)
T 2ad6_A 310 PVNGKMTPLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQG 389 (571)
T ss_dssp EETTEEEEEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSC
T ss_pred ccCCcEEEEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCC
Confidence 35674 56778889999999999999887765432100 00 00 00 003
Q ss_pred eeeeccCCCEEEEEccc--------------CC-------------C----CCeeEEECCCCCCCccceeecCCccceEE
Q psy7108 208 RRKMTEFGNVSLIETRE--------------TH-------------E----GGNVVLKLPGVKKGDMAARVLKPEVRVFC 256 (703)
Q Consensus 208 ~~~~spdg~~l~~~~~~--------------~~-------------~----~~~~~i~iwd~~~~~~~~~~~~h~~~V~~ 256 (703)
.++++|+...+++.+.+ +. . .....+..||..+++.+-+.... ..+.+
T Consensus 390 ~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~-~~~~~ 468 (571)
T 2ad6_A 390 VDSYDPESRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEK-FAAWG 468 (571)
T ss_dssp BCEEETTTTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEES-SCCCS
T ss_pred CceECCCCCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCC-CCccc
Confidence 46788888877775431 00 0 12357889999999876555422 12222
Q ss_pred EEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108 257 VKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 257 l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~ 289 (703)
......+..++.++.|+ ++.+|..+|+.+-.+.
T Consensus 469 ~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~~ 502 (571)
T 2ad6_A 469 GTLYTKGGLVWYATLDGYLKALDNKDGKELWNFK 502 (571)
T ss_dssp BCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred eeEEECCCEEEEEcCCCeEEEEECCCCCEEEEEe
Confidence 22233456777788999 9999999999876554
No 274
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=97.28 E-value=0.027 Score=59.47 Aligned_cols=195 Identities=6% Similarity=-0.010 Sum_probs=116.3
Q ss_pred EEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEE
Q psy7108 51 SCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSV 129 (703)
Q Consensus 51 ~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~ 129 (703)
+|.+..+ .+ +|+.+. ...|+..++.... ...+......+..++|++.+..|+.+. ..+.|..++++.+.....+
T Consensus 80 ~C~~~~~--~~-~l~~~~-~~~I~~i~~~~~~-~~~~~~~~~~~~gl~~d~~~~~ly~~D~~~~~I~r~~~~g~~~~~~~ 154 (386)
T 3v65_B 80 SCKALGP--EP-VLLFAN-RIDIRQVLPHRSE-YTLLLNNLENAIALDFHHRRELVFWSDVTLDRILRANLNGSNVEEVV 154 (386)
T ss_dssp CEEECSS--CC-EEEEEC-BSCEEEECTTSCC-CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCCEEEEE
T ss_pred eECCccc--cc-eeEeec-CccceeeccCCCc-EEEEecCCCccEEEEEecCCCeEEEEeCCCCcEEEEecCCCCcEEEE
Confidence 4444444 33 444433 3568888876553 344445556688999998776666554 5678999998876543333
Q ss_pred eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCcccccccccee
Q psy7108 130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINR 208 (703)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~ 208 (703)
..... ....+++++.+..|.. -...+.|.+.++........+... ......
T Consensus 155 ~~~~~--------------------~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~~~~l~~~~--------l~~P~g 206 (386)
T 3v65_B 155 STGLE--------------------SPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAHRKVLLWQS--------LEKPRA 206 (386)
T ss_dssp CSSCS--------------------CCCCEEEETTTTEEEEEETTTTEEEECBTTSCSCEEEECSS--------CSCEEE
T ss_pred eCCCC--------------------CccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCceEEeecCC--------CCCCcE
Confidence 22111 3356888876555554 445678888888754332222111 124577
Q ss_pred eeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108 209 RKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG 282 (703)
Q Consensus 209 ~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~ 282 (703)
++++|.+..++++.... ...|...+.............-.....++++|++..|..+.... |..++++..
T Consensus 207 iavdp~~g~ly~td~~~----~~~I~r~~~dG~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (386)
T 3v65_B 207 IALHPMEGTIYWTDWGN----TPRIEASSMDGSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGS 278 (386)
T ss_dssp EEEETTTTEEEEEECSS----SCEEEEEETTSCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSC
T ss_pred EEEEcCCCeEEEeccCC----CCEEEEEeCCCCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCC
Confidence 89999877776654321 12566666554322222222334578999999888876665544 888887653
No 275
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=97.28 E-value=0.048 Score=55.46 Aligned_cols=214 Identities=12% Similarity=0.053 Sum_probs=123.0
Q ss_pred eEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEEecC-----C--CcEEEEEE---ecCCCEEEEEEC-------
Q psy7108 50 VSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHETIQL-----L--SDALCVAY---KPDGTEIVVATL------- 111 (703)
Q Consensus 50 V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~~~~-----~--~~V~~v~~---spdg~~las~s~------- 111 (703)
--+++|++ ....|..++ ..++|..|+...+......... . ..+..+.| .|+++++++...
T Consensus 15 PE~~~wd~--~~g~~~vs~l~~g~V~~~~~~~~~~~~~~~~~~s~~g~~~~~~sGl~~~~~D~~grL~vv~~~~~af~~~ 92 (334)
T 2p9w_A 15 PEDTIYDR--TRQVFYQSNLYKGRIEVYNPKTQSHFNVVIDGASSNGDGEQQMSGLSLLTHDNSKRLFAVMKNAKSFNFA 92 (334)
T ss_dssp CSCEEEET--TTTEEEEEETTTTEEEEECTTTCCEEEECCTTTCCSSCCSEEEEEEEESSSSSCCEEEEEEEETTTTCTT
T ss_pred CcCccCcC--CCCEEEEEeccCCEEEEEcCCCCeEEEEecCCccccCCCcceeeEEEEeccCCCCcEEEEEccccccccc
Confidence 34689988 455555554 7899999998755332222222 1 13578999 688777776432
Q ss_pred ------CCeEEEEEcC---CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-CcEEEEE
Q psy7108 112 ------DGQLIMFDVE---SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-KYICIYS 181 (703)
Q Consensus 112 ------dg~I~vwd~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-g~I~lwD 181 (703)
+..|..+|+. +++.+....-..-. ................++..++|+..++++.. +.|...+
T Consensus 93 g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~-------~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~~I~rV~ 165 (334)
T 2p9w_A 93 DQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQ-------DEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMPAIARVS 165 (334)
T ss_dssp SCCSSSCCEEEEEESSCCTTCCCSEEEESHHHH-------HHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSCEEEEEC
T ss_pred ccccCCCCEEEEEcCCcCCCCCEEEEecCcccc-------ccccccccccccCCceeEECCCCCEEEeCCCCCCeEEEEe
Confidence 5779999998 77766554421100 00000000011247899999999999998888 8888888
Q ss_pred CCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeec-CC---ccceE
Q psy7108 182 SREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVL-KP---EVRVF 255 (703)
Q Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~-~h---~~~V~ 255 (703)
.... ....+...... .......+.++++|+|..+++....+ .+..+|+.+... +.... +. -....
T Consensus 166 pdG~-~~~~~~~~~~~--~~~~~G~nGIv~~pdg~~Liv~~~~g------~L~~fD~~~pv~~~v~~~~~G~~~~~~~~d 236 (334)
T 2p9w_A 166 ADGK-TVSTFAWESGN--GGQRPGYSGITFDPHSNKLIAFGGPR------ALTAFDVSKPYAWPEPVKINGDFGTLSGTE 236 (334)
T ss_dssp TTSC-CEEEEEECCCC--SSSCCSCSEEEEETTTTEEEEESSSS------SEEEEECSSSSCCCEECEESSCCCCCTTEE
T ss_pred CCCC-EEeeeeecCCC--cccccCcceEEEeCCCCEEEEEcCCC------eEEEEcCCCCcceeecccccCCcccccCcc
Confidence 7644 33433322211 11123467899999999888876632 566677663222 11110 11 11233
Q ss_pred E-EEEcCCCCEE-EEEeCCC-EEEEEcCC
Q psy7108 256 C-VKFSPTGQAW-VAATTEG-VHIYSLDS 281 (703)
Q Consensus 256 ~-l~~spdg~~l-~s~s~Dg-v~iwd~~~ 281 (703)
. +..-.+|+.+ ++.+..+ +.+.+.+.
T Consensus 237 gilp~~~~G~vllV~~~~~~~~~l~S~Dg 265 (334)
T 2p9w_A 237 KIVTVPVGNESVLVGARAPYAISFRSWDN 265 (334)
T ss_dssp EEEEEEETTEEEEEEEETTEEEEEECSST
T ss_pred cccccccCCEEEEEEcCCCCEEEEECCCC
Confidence 3 3333477774 5555556 55666554
No 276
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=97.24 E-value=0.073 Score=56.39 Aligned_cols=187 Identities=8% Similarity=-0.018 Sum_probs=113.4
Q ss_pred CEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCc----EEEEEeccccCC
Q psy7108 62 TGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESAA----QVGSVEARRDLD 136 (703)
Q Consensus 62 ~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~----~~~~~~~~~~~~ 136 (703)
.+|+.+. ...|+..++.... ...+......+..++|++.+..|+.+. ..+.|+.++++... ....+...
T Consensus 84 ~~ll~~~-~~~I~~i~l~~~~-~~~~~~~~~~~~~l~~d~~~~~lywsD~~~~~I~~~~~~g~~~~~~~~~~~~~~---- 157 (400)
T 3p5b_L 84 AYLFFTN-RHEVRKMTLDRSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRD---- 157 (400)
T ss_dssp CEEEEEE-TTEEEEECTTSCS-CEEEECSCSCEEEEEEETTTTEEEEEETTTTEEEEEEC------CCCEEEECSS----
T ss_pred ceeEEec-cceeEEEccCCcc-eeEeccccCcceEEeeeeccCceEEEecCCCeEEEEEcccCCCCCcceEEEeCC----
Confidence 3454444 3678888887653 344455667789999999777776654 46788888886522 22222211
Q ss_pred CCCCCCccchhhcccCCccEEEEEEcCCCCEEEE-EecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCC
Q psy7108 137 SGRLDTDLVTREQSLKAKAVSTVCYSADGSCILA-AGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFG 215 (703)
Q Consensus 137 ~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s-~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg 215 (703)
......+++.+.+..|.. -...+.|.+.|+........+... ......+++.|.+
T Consensus 158 ----------------~~~p~glavD~~~~~lY~~d~~~~~I~~~~~~g~~~~~l~~~~--------~~~P~~iavdp~~ 213 (400)
T 3p5b_L 158 ----------------IQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRKTLFREN--------GSKPRAIVVDPVH 213 (400)
T ss_dssp ----------------CSCEEEEEEETTTTEEEEEETTTTEEEEECTTTCSEEEEEECS--------SCCEEEEEEETTT
T ss_pred ----------------CCCcccEEEEecCCceEEEECCCCeEEEEeCCCCceEEEEeCC--------CCCcceEEEeccc
Confidence 125678999885555554 455678999998865443333211 1245778999977
Q ss_pred CEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCCC
Q psy7108 216 NVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDSG 282 (703)
Q Consensus 216 ~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~~ 282 (703)
..++++.... . ..|...++............-.....++++|++..|..+.... |..++++..
T Consensus 214 g~ly~td~~~-~---~~I~~~~~dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~ 278 (400)
T 3p5b_L 214 GFMYWTDWGT-P---AKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG 278 (400)
T ss_dssp TEEEEEECSS-S---CCEEEEETTSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC
T ss_pred CeEEEEeCCC-C---CEEEEEeCCCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC
Confidence 7666654321 1 2466666543332222222335678999999888887776544 888888654
No 277
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=97.20 E-value=0.058 Score=53.08 Aligned_cols=167 Identities=8% Similarity=0.057 Sum_probs=104.9
Q ss_pred cCCCcEEEEEEecCCCEEE-EEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCE
Q psy7108 89 QLLSDALCVAYKPDGTEIV-VATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSC 167 (703)
Q Consensus 89 ~~~~~V~~v~~spdg~~la-s~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~ 167 (703)
+..+.+..++|+|++..|+ +...++.|...|.. ++.++.+.-.. ......+++.+++.+
T Consensus 24 g~~~~lSGla~~~~~~~L~aV~d~~~~I~~ld~~-g~v~~~i~l~g-------------------~~D~EGIa~~~~g~~ 83 (255)
T 3qqz_A 24 GITNNISSLTWSAQSNTLFSTINKPAAIVEMTTN-GDLIRTIPLDF-------------------VKDLETIEYIGDNQF 83 (255)
T ss_dssp TCCSCEEEEEEETTTTEEEEEEETTEEEEEEETT-CCEEEEEECSS-------------------CSSEEEEEECSTTEE
T ss_pred CcccCcceeEEeCCCCEEEEEECCCCeEEEEeCC-CCEEEEEecCC-------------------CCChHHeEEeCCCEE
Confidence 3456799999999877555 56678889999998 88777764321 114778999999987
Q ss_pred EEEEecCCcEEEEECCCCceE---EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCC-CCCcc
Q psy7108 168 ILAAGQSKYICIYSSREGILL---KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGV-KKGDM 243 (703)
Q Consensus 168 l~s~s~dg~I~lwD~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~-~~~~~ 243 (703)
+++.-.++.+.++++.....+ ........ ....+.....++++|.++.++++...+ ...+..|+- .....
T Consensus 84 ~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~--~~~~N~g~EGLA~d~~~~~L~va~E~~----p~~i~~~~g~~~~~~ 157 (255)
T 3qqz_A 84 VISDERDYAIYVISLTPNSEVKILKKIKIPLQ--ESPTNCGFEGLAYSRQDHTFWFFKEKN----PIEVYKVNGLLSSNE 157 (255)
T ss_dssp EEEETTTTEEEEEEECTTCCEEEEEEEECCCS--SCCCSSCCEEEEEETTTTEEEEEEESS----SEEEEEEESTTCSSC
T ss_pred EEEECCCCcEEEEEcCCCCeeeeeeeeccccc--cccccCCcceEEEeCCCCEEEEEECcC----CceEEEEcccccCCc
Confidence 777667788999998765432 22221110 011233568899999998877766432 124554541 11111
Q ss_pred ceeec-------CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108 244 AARVL-------KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS 281 (703)
Q Consensus 244 ~~~~~-------~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~ 281 (703)
..... .+-..+.+++++|....+...+.++ +.++|.+.
T Consensus 158 l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g 204 (255)
T 3qqz_A 158 LHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVG 204 (255)
T ss_dssp CEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTC
T ss_pred eeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCC
Confidence 11111 1234578999999877766555555 77777653
No 278
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.0092 Score=64.13 Aligned_cols=151 Identities=11% Similarity=0.147 Sum_probs=92.3
Q ss_pred cEEEEEEec-CCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEE
Q psy7108 93 DALCVAYKP-DGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAA 171 (703)
Q Consensus 93 ~V~~v~~sp-dg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~ 171 (703)
....++++| ++..|+++...+.|+.+|++++........ ......++|+++|+.|+++
T Consensus 138 ~P~~lavdp~~~g~Lyv~d~~~~I~~id~~~~~v~~~~~~---------------------~~~P~~ia~d~~G~~lyva 196 (430)
T 3tc9_A 138 GAVWLSFDPKNHNHLYLVGEQHPTRLIDFEKEYVSTVYSG---------------------LSKVRTICWTHEADSMIIT 196 (430)
T ss_dssp CCCEEEEETTEEEEEEEEEBTEEEEEEETTTTEEEEEECC---------------------CSCEEEEEECTTSSEEEEE
T ss_pred CCCEEEECCCCCCeEEEEeCCCcEEEEECCCCEEEEEecC---------------------CCCcceEEEeCCCCEEEEE
Confidence 457889998 466676666668899999987665443331 1257899999999966666
Q ss_pred ecC-C----cEEEEECCCCceE--EEEEeccCCccccccccceeeeecc-CCCEEEEEcccCCCCCeeEEECCCCCCCcc
Q psy7108 172 GQS-K----YICIYSSREGILL--KKFTITQNKSLDGINDFINRRKMTE-FGNVSLIETRETHEGGNVVLKLPGVKKGDM 243 (703)
Q Consensus 172 s~d-g----~I~lwD~~~~~~~--~~~~~~~~~~~~~~~~~v~~~~~sp-dg~~l~~~~~~~~~~~~~~i~iwd~~~~~~ 243 (703)
... + .+...+.. +... ..+.. ......++++| +|..+++.... ..|..++...+..
T Consensus 197 d~~~~~~~~~v~~~~~~-g~~~~~~~l~~---------~~~p~giavdp~~g~lyv~d~~~------~~V~~~~~~~~~~ 260 (430)
T 3tc9_A 197 NDQNNNDRPNNYILTRE-SGFKVITELTK---------GQNCNGAETHPINGELYFNSWNA------GQVFRYDFTTQET 260 (430)
T ss_dssp ECCSCTTSEEEEEEEGG-GTSCSEEEEEE---------CSSCCCEEECTTTCCEEEEETTT------TEEEEEETTTTEE
T ss_pred eCCCCcccceEEEEeCC-Cceeeeeeecc---------CCCceEEEEeCCCCEEEEEECCC------CEEEEEECCCCcE
Confidence 542 1 24444433 2221 22211 12456788999 66655554433 2688888776543
Q ss_pred ceeec-CCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcC
Q psy7108 244 AARVL-KPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLD 280 (703)
Q Consensus 244 ~~~~~-~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~ 280 (703)
..... ........++|+|+|++|..+... + |..++.+
T Consensus 261 ~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~I~~~~~d 300 (430)
T 3tc9_A 261 TPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHYILRSDYD 300 (430)
T ss_dssp EEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred EEEEEcCCCCcceeEEEcCCCCEEEEEECCCCEEEEEeCC
Confidence 22221 122356789999999977665544 4 8887765
No 279
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=97.12 E-value=0.083 Score=61.30 Aligned_cols=201 Identities=11% Similarity=0.087 Sum_probs=124.1
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------c---CCCcEEEEEEecCCCEEEEEECCCeEEE
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------Q---LLSDALCVAYKPDGTEIVVATLDGQLIM 117 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------~---~~~~V~~v~~spdg~~las~s~dg~I~v 117 (703)
...|.++...+ +|. |-.|+.++-|..++..+........ . ....|.+++..++|.. ..|+.++-|..
T Consensus 312 ~~~v~~i~~D~--~g~-lWigt~~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~l-Wigt~~~Gl~~ 387 (781)
T 3v9f_A 312 NASARYIFQDS--FNN-IWIGTWGGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKL-WIGTDGGGINV 387 (781)
T ss_dssp SSCEEEEEECS--SCC-EEEEEBSSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCE-EEEEBSSCEEE
T ss_pred CCeEEEEEEeC--CCC-EEEEecCCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCE-EEEeCCCcEEE
Confidence 46799999988 776 4456666678888876543211110 0 2356899998888764 45666677899
Q ss_pred EEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCC
Q psy7108 118 FDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNK 197 (703)
Q Consensus 118 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~ 197 (703)
||..+++... +.... ......|.++...++|...+ |+.++-+..+|.++++.. .+...
T Consensus 388 ~~~~~~~~~~-~~~~~----------------~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~--- 445 (781)
T 3v9f_A 388 FENGKRVAIY-NKENR----------------ELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRLKKFQ-IIELE--- 445 (781)
T ss_dssp EETTEEEEEC-C---------------------CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSSCEEE-ECCST---
T ss_pred EECCCCeEEE-ccCCC----------------CCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCCCcEE-EeccC---
Confidence 9976543221 11000 11234799999888887554 666667999998876532 22111
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCC-----ccceEEEEEcCCCCEEEEEeCC
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKP-----EVRVFCVKFSPTGQAWVAATTE 272 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h-----~~~V~~l~~spdg~~l~s~s~D 272 (703)
......|.++...++|...+.+. . -+..+|..+++........ ...|.++...++|+..+....+
T Consensus 446 --~~~~~~v~~i~~d~~g~lwigt~-~-------Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~~~ 515 (781)
T 3v9f_A 446 --KNELLDVRVFYEDKNKKIWIGTH-A-------GVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTFGG 515 (781)
T ss_dssp --TTCCCCEEEEEECTTSEEEEEET-T-------EEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEESSS
T ss_pred --CCCCCeEEEEEECCCCCEEEEEC-C-------ceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEcCC
Confidence 01123677888888877555433 3 3777877766543322211 4578999999999876655546
Q ss_pred CEEEEEcCCCc
Q psy7108 273 GVHIYSLDSGY 283 (703)
Q Consensus 273 gv~iwd~~~~~ 283 (703)
|+..|+..+++
T Consensus 516 Gl~~~~~~~~~ 526 (781)
T 3v9f_A 516 GVGIYTPDMQL 526 (781)
T ss_dssp CEEEECTTCCE
T ss_pred CEEEEeCCCCe
Confidence 78889877654
No 280
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.10 E-value=0.034 Score=62.18 Aligned_cols=180 Identities=14% Similarity=0.123 Sum_probs=105.8
Q ss_pred EEEecCCCEEEEEEC--------------------C----CeEEEEEcCCCcEEEEEeccc-cCCCCCCCCccchhhccc
Q psy7108 97 VAYKPDGTEIVVATL--------------------D----GQLIMFDVESAAQVGSVEARR-DLDSGRLDTDLVTREQSL 151 (703)
Q Consensus 97 v~~spdg~~las~s~--------------------d----g~I~vwd~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 151 (703)
++++|+...++.++. | +.|..+|.++|+.+-.++... +... ...
T Consensus 251 ~a~d~~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd-----------~~~ 319 (582)
T 1flg_A 251 ASFDAETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWD-----------FSG 319 (582)
T ss_dssp CEEETTTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSC-----------CCC
T ss_pred ceEcCCCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCccc-----------ccC
Confidence 566777777777663 2 589999999999987775421 1000 000
Q ss_pred CCccEEEEEEc-CCCC---EEEEEecCCcEEEEECCCCceEEEEEeccCCc-------------------cc-------c
Q psy7108 152 KAKAVSTVCYS-ADGS---CILAAGQSKYICIYSSREGILLKKFTITQNKS-------------------LD-------G 201 (703)
Q Consensus 152 ~~~~V~~i~~s-pdg~---~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~-------------------~~-------~ 201 (703)
...++. +... .+|+ .++.++.+|.++++|.++|+.+..+....... .. .
T Consensus 320 ~~~p~l-~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~ 398 (582)
T 1flg_A 320 NNELVL-FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKH 398 (582)
T ss_dssp CCCCEE-EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSS
T ss_pred CCCcEE-EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccC
Confidence 011222 2222 4674 67788999999999999999887765432100 00 0
Q ss_pred ccc-----------cceeeeeccCCCEEEEEccc--------------CC-------------CCCeeEEECCCCCCCcc
Q psy7108 202 IND-----------FINRRKMTEFGNVSLIETRE--------------TH-------------EGGNVVLKLPGVKKGDM 243 (703)
Q Consensus 202 ~~~-----------~v~~~~~spdg~~l~~~~~~--------------~~-------------~~~~~~i~iwd~~~~~~ 243 (703)
... .-..++++|+...+++.... +. ......+.-||+.+++.
T Consensus 399 ~~~~~~~P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~ 478 (582)
T 1flg_A 399 GKAVEVSPPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKV 478 (582)
T ss_dssp CCCEEESSCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCE
T ss_pred CCceEECcCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCE
Confidence 000 01245667766655554321 00 01125788999999987
Q ss_pred ceeecCCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCCCceeccee
Q psy7108 244 AARVLKPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 244 ~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~~~~~~~~~ 289 (703)
+-+..... .+..-.....+..++.++.|+ ++.||.++|+.+-.+.
T Consensus 479 ~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~~ 524 (582)
T 1flg_A 479 VWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKFQ 524 (582)
T ss_dssp EEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEec
Confidence 65544221 111111122466777899999 9999999999876554
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=97.05 E-value=0.031 Score=62.44 Aligned_cols=198 Identities=13% Similarity=0.117 Sum_probs=115.1
Q ss_pred EEEEEcCCCCCCEEEEEeC--------------------C----CcEEEEEcCCCceeEEEec--CC--------CcEEE
Q psy7108 51 SCIEFSPVLSSTGMVSASW--------------------D----KTVKLWNAVETDTQHETIQ--LL--------SDALC 96 (703)
Q Consensus 51 ~~l~~sp~~dg~~L~sgs~--------------------D----g~V~iWd~~~~~~~~~~~~--~~--------~~V~~ 96 (703)
..++++| +..+++.+.. | +.|..+|..+++....... |. .++.
T Consensus 249 ~~~a~d~--~~g~vyv~~gn~~~~~~~~r~~~gg~~~~~d~~~~~~v~AlD~~TG~~~W~~q~~~~d~wd~~~~~~p~l- 325 (582)
T 1flg_A 249 QSASFDA--ETNTIIVGAGNPGPWNTWARTAKGGNPHDYDSLYTSGQVGVDPSSGEVKWFYQHTPNDAWDFSGNNELVL- 325 (582)
T ss_dssp SCCEEET--TTTEEEEEECCBSSSCGGGGSCTTSCSTTCCCTTCSEEEEECTTTCCEEEEEESSTTCCSCCCCCCCCEE-
T ss_pred CCceEcC--CCCEEEEeCCCCCcccCcccccCCCcccccCCcccceEEEEeCCCCCEEEEEeCCCCCcccccCCCCcEE-
Confidence 3567888 7777776652 2 5799999999977665543 21 1222
Q ss_pred EEEe-cCCC---EEEEEECCCeEEEEEcCCCcEEEEEeccccCC--------CCCCC------C-----------ccchh
Q psy7108 97 VAYK-PDGT---EIVVATLDGQLIMFDVESAAQVGSVEARRDLD--------SGRLD------T-----------DLVTR 147 (703)
Q Consensus 97 v~~s-pdg~---~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~--------~~~~~------~-----------~~~~~ 147 (703)
+... .+|+ .++.++.+|.++++|.++|+.+.......... .++.. . .....
T Consensus 326 ~~~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~ 405 (582)
T 1flg_A 326 FDYKAKDGKIVKATAHADRNGFFYVVDRSNGKLQNAFPFVDNITWASHIDLKTGRPVEREGQRPPLPEPGQKHGKAVEVS 405 (582)
T ss_dssp EEEECSSSCEEEEEEEECTTSEEEEEETTTCCEEEEEESSSCCCSEEEECTTTCCEEECTTCSCCCCCTTCSSCCCEEES
T ss_pred EeeecCCCCEEEEEEEECCCceEEEEECCCCCEecccccccCccccccccccCCCEeEccccCCccccccccCCCceEEC
Confidence 2222 4674 67888999999999999999987766543110 00000 0 00000
Q ss_pred hcccCCccEEEEEEcCCCCEEEEEe---------------------------------cCCcEEEEECCCCceEEEEEec
Q psy7108 148 EQSLKAKAVSTVCYSADGSCILAAG---------------------------------QSKYICIYSSREGILLKKFTIT 194 (703)
Q Consensus 148 ~~~~~~~~V~~i~~spdg~~l~s~s---------------------------------~dg~I~lwD~~~~~~~~~~~~~ 194 (703)
+..........++++|+...+++.. .++.|..||+.+++.+-+....
T Consensus 406 P~~~Gg~~w~~~a~dp~~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~p~~~~~~G~l~A~D~~tG~~~W~~~~~ 485 (582)
T 1flg_A 406 PPFLGGKNWNPMAYSQDTGLFYVPANHWKEDYWTEEVSYTKGSAYLGMGFRIKRMYDDHVGSLRAMDPVSGKVVWEHKEH 485 (582)
T ss_dssp SCTTCSSCSSCCEECTTTCCEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEESCSSCSEEEEEECTTTCCEEEEEEES
T ss_pred cCCccccCCCCceECCCCCEEEEechhcceeeecccccccCCCceeccceeecCCCCCCcceEEEEECCCCCEEEEecCC
Confidence 0000011112456677655544432 2578999999999887666532
Q ss_pred cCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccce-EEEEEcCCCCEE
Q psy7108 195 QNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRV-FCVKFSPTGQAW 266 (703)
Q Consensus 195 ~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V-~~l~~spdg~~l 266 (703)
. ....-.....+..+++++.++ .++.+|.++|+.+.++....... .-+.+..+|+..
T Consensus 486 ~---------~~~~g~~~tagglvf~g~~dg------~l~A~D~~tG~~lW~~~~~~g~~a~P~~y~~~G~qY 543 (582)
T 1flg_A 486 L---------PLWAGVLATAGNLVFTGTGDG------YFKAFDAKSGKELWKFQTGSGIVSPPITWEQDGEQY 543 (582)
T ss_dssp S---------CCCSCCEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEE
T ss_pred C---------CCcccceEeCCCEEEEECCCC------cEEEEECCCCCEEEEecCCCCcccCceEEEECCEEE
Confidence 2 111222233456666666543 89999999999887776543221 225566777644
No 282
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.99 E-value=0.03 Score=62.63 Aligned_cols=209 Identities=11% Similarity=0.088 Sum_probs=123.0
Q ss_pred CCCcEEEEEcCCCceeEEEecCCCc-------------------------------------E-EEEEEecCCCEEEEEE
Q psy7108 69 WDKTVKLWNAVETDTQHETIQLLSD-------------------------------------A-LCVAYKPDGTEIVVAT 110 (703)
Q Consensus 69 ~Dg~V~iWd~~~~~~~~~~~~~~~~-------------------------------------V-~~v~~spdg~~las~s 110 (703)
.+|.|+.+|..+++...+....... + ..+++.++...++.++
T Consensus 180 ~~g~v~A~D~~TG~~~W~~~~~~~~~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~ 259 (599)
T 1w6s_A 180 VRGYLTAYDVKTGEQVWRAYATGPDKDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGT 259 (599)
T ss_dssp CCCEEEEEETTTCCEEEEEESSSCHHHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEEC
T ss_pred CCCeEEEEECCCCcEEEEEcCCCCccccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeC
Confidence 3789999999999776555432111 1 1356677777888776
Q ss_pred CC----------------CeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEc-CCC---CEEEE
Q psy7108 111 LD----------------GQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYS-ADG---SCILA 170 (703)
Q Consensus 111 ~d----------------g~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~s-pdg---~~l~s 170 (703)
.+ +.|..+|.++|+.+-.++....- .+ .......++. +... .+| +.++.
T Consensus 260 g~~~p~~~~~r~gd~~y~~sv~Ald~~TG~~~W~~q~~~~d--------~w--d~d~~~~p~l-~d~~~~~G~~~~~v~~ 328 (599)
T 1w6s_A 260 GNPAPWNETMRPGDNKWTMTIFGRDADTGEAKFGYQKTPHD--------EW--DYAGVNVMML-SEQKDKDGKARKLLTH 328 (599)
T ss_dssp CCCSCSCGGGSCSCCTTSSEEEEEETTTCCEEEEEESSTTC--------SS--CCCCCCCCEE-EEEECTTSCEEEEEEE
T ss_pred CCCccccCcccCCCccccceEEEEeCCCCceeeEeecCCCc--------cc--cccCCCccEE-EeccccCCcEEEEEEE
Confidence 55 37999999999998776653210 00 0000011222 2222 567 46777
Q ss_pred EecCCcEEEEECCCCceEEEEEeccCCc----c---cc-------------cc-----------ccceeeeeccCCCEEE
Q psy7108 171 AGQSKYICIYSSREGILLKKFTITQNKS----L---DG-------------IN-----------DFINRRKMTEFGNVSL 219 (703)
Q Consensus 171 ~s~dg~I~lwD~~~~~~~~~~~~~~~~~----~---~~-------------~~-----------~~v~~~~~spdg~~l~ 219 (703)
++.+|.+.++|.++|+.+.......... + .+ .. ..-..++++|+...++
T Consensus 329 ~~~~G~l~~lD~~tG~~lw~~~~~~~~~~~~~~~~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~~~~~y 408 (599)
T 1w6s_A 329 PDRNGIVYTLDRTDGALVSANKLDDTVNVFKSVDLKTGQPVRDPEYGTRMDHLAKDICPSAMGYHNQGHDSYDPKRELFF 408 (599)
T ss_dssp ECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCCEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETTTTEEE
T ss_pred ECCCcEEEEEECCCCCEeecccccCCcccccccccCCCceeeccccCCCCCCCccEeccCcccccCCCCccCCCCCCEEE
Confidence 8899999999999999887665321000 0 00 00 0113467777777665
Q ss_pred EEccc--------------CC-------------CC------CeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEE
Q psy7108 220 IETRE--------------TH-------------EG------GNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAW 266 (703)
Q Consensus 220 ~~~~~--------------~~-------------~~------~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l 266 (703)
+...+ +. .+ ....+.-||+.+++.+-+.... .+..+-...-.+..+
T Consensus 409 v~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~p~~~~~~~~~~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~v 487 (599)
T 1w6s_A 409 MGINHICMDWEPFMLPYKAGQFFVGATLNMYPGPKGDRQNYEGLGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLV 487 (599)
T ss_dssp EEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSBTTTTBCCEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEE
T ss_pred EeccccceeeecccccccCCcceecccceeccCCcCCcccCCCcCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEE
Confidence 54211 00 00 1247888899888766554311 111111122346677
Q ss_pred EEEeCCC-EEEEEcCCCceeccee
Q psy7108 267 VAATTEG-VHIYSLDSGYVFDPFL 289 (703)
Q Consensus 267 ~s~s~Dg-v~iwd~~~~~~~~~~~ 289 (703)
+.++.|+ ++.||.++|+.+-.+.
T Consensus 488 f~gt~dg~l~A~D~~tG~~lW~~~ 511 (599)
T 1w6s_A 488 FYGTLDGYLKARDSDTGDLLWKFK 511 (599)
T ss_dssp EEECTTSEEEEEETTTCCEEEEEE
T ss_pred EEECCCCeEEEEECCCCCEEEEee
Confidence 7789999 9999999998865543
No 283
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=96.98 E-value=0.14 Score=59.39 Aligned_cols=201 Identities=10% Similarity=0.046 Sum_probs=124.1
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEE----ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHET----IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~----~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~ 122 (703)
...|.++...+ +|.+. .|+.++-+..++..++. .... ......|.++...++|...+ |+.++-+..+|..+
T Consensus 362 ~~~v~~i~~d~--~g~lW-igt~~~Gl~~~~~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lWi-gt~~~Gl~~~~~~~ 436 (781)
T 3v9f_A 362 NKVVSSVCDDG--QGKLW-IGTDGGGINVFENGKRV-AIYNKENRELLSNSVLCSLKDSEGNLWF-GTYLGNISYYNTRL 436 (781)
T ss_dssp SSCEEEEEECT--TSCEE-EEEBSSCEEEEETTEEE-EECC-----CCCSBEEEEEECTTSCEEE-EETTEEEEEECSSS
T ss_pred CcceEEEEEcC--CCCEE-EEeCCCcEEEEECCCCe-EEEccCCCCCCCcceEEEEECCCCCEEE-EeccCCEEEEcCCC
Confidence 35699999887 66644 55555668888875432 1111 11345789998888887544 66667799999877
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
++... +... ......|.++...++|...+ |+. +-+..||..+++........ .. ...
T Consensus 437 ~~~~~-~~~~-----------------~~~~~~v~~i~~d~~g~lwi-gt~-~Gl~~~~~~~~~~~~~~~~~-~~--~~~ 493 (781)
T 3v9f_A 437 KKFQI-IELE-----------------KNELLDVRVFYEDKNKKIWI-GTH-AGVFVIDLASKKVIHHYDTS-NS--QLL 493 (781)
T ss_dssp CEEEE-CCST-----------------TTCCCCEEEEEECTTSEEEE-EET-TEEEEEESSSSSCCEEECTT-TS--SCS
T ss_pred CcEEE-eccC-----------------CCCCCeEEEEEECCCCCEEE-EEC-CceEEEeCCCCeEEecccCc-cc--ccc
Confidence 65432 2110 01123789999888886544 444 55899998876543322111 10 111
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC---CccceEEEEEcCCCCEEEEEeCCCE-EEEE
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK---PEVRVFCVKFSPTGQAWVAATTEGV-HIYS 278 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~---h~~~V~~l~~spdg~~l~s~s~Dgv-~iwd 278 (703)
...|.++...++|...+.+...| +..+|..+++....... ....|.++...++|+..++.. +|+ ..|+
T Consensus 494 ~~~i~~i~~d~~g~lWigt~~~G-------l~~~~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWi~T~-~Glv~~~d 565 (781)
T 3v9f_A 494 ENFVRSIAQDSEGRFWIGTFGGG-------VGIYTPDMQLVRKFNQYEGFCSNTINQIYRSSKGQMWLATG-EGLVCFPS 565 (781)
T ss_dssp CSCEEEEEECTTCCEEEEESSSC-------EEEECTTCCEEEEECTTTTCSCSCEEEEEECTTSCEEEEET-TEEEEESC
T ss_pred cceeEEEEEcCCCCEEEEEcCCC-------EEEEeCCCCeEEEccCCCCCCCCeeEEEEECCCCCEEEEEC-CCceEEEC
Confidence 24688888888888665544332 66677765543221111 245689999999998665544 776 8888
Q ss_pred cCCCc
Q psy7108 279 LDSGY 283 (703)
Q Consensus 279 ~~~~~ 283 (703)
..+++
T Consensus 566 ~~~~~ 570 (781)
T 3v9f_A 566 ARNFD 570 (781)
T ss_dssp TTTCC
T ss_pred CCCCc
Confidence 77654
No 284
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.95 E-value=0.076 Score=54.48 Aligned_cols=196 Identities=11% Similarity=0.178 Sum_probs=113.3
Q ss_pred CCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecC----CCE--EEEE-EC---CCeEEEEEcC--CCcEEEE
Q psy7108 61 STGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPD----GTE--IVVA-TL---DGQLIMFDVE--SAAQVGS 128 (703)
Q Consensus 61 g~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spd----g~~--las~-s~---dg~I~vwd~~--~~~~~~~ 128 (703)
..+++.....+-+.++|+ +++.+..+ .. +.++.+...|+ |+. ++.+ .. +++|.+|+++ +++ +..
T Consensus 40 ~s~ii~t~k~~gL~Vydl-~G~~l~~~-~~-g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~-l~~ 115 (355)
T 3amr_A 40 NSKLITTNKKSGLVVYSL-DGKMLHSY-NT-GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGT-LQS 115 (355)
T ss_dssp GCEEEEEETTTEEEEEET-TSCEEEEE-CC-SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCC-EEE
T ss_pred ccEEEEEcCCCCEEEEcC-CCcEEEEc-cC-CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCc-eee
Confidence 456666677788999999 66555443 22 56777777663 322 3333 33 4789999774 333 333
Q ss_pred EeccccCCCCCCCCccchhhcccCCccEEEEEE--cCC-CC-EEEEEecCCcEEEEECC-------CCceEEEEEeccCC
Q psy7108 129 VEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY--SAD-GS-CILAAGQSKYICIYSSR-------EGILLKKFTITQNK 197 (703)
Q Consensus 129 ~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~--spd-g~-~l~s~s~dg~I~lwD~~-------~~~~~~~~~~~~~~ 197 (703)
+..... . ....-..+..+|+ +|. ++ ++++...+|.+..|++. +.+.+++|...
T Consensus 116 i~~~~~-p------------v~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg--- 179 (355)
T 3amr_A 116 MTDPDH-P------------IATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN--- 179 (355)
T ss_dssp CSCTTS-C------------EECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---
T ss_pred cccccc-C------------cCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---
Confidence 321000 0 0000024566777 774 44 57778888999999883 23556666542
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCC-----CCccceeec-C-CccceEEEEE--cCCCC-EEE
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVK-----KGDMAARVL-K-PEVRVFCVKF--SPTGQ-AWV 267 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~-----~~~~~~~~~-~-h~~~V~~l~~--spdg~-~l~ 267 (703)
..+..+...+....++++-.+ .-|..+|.+ +++.+.... + ....+..+++ .++++ +|+
T Consensus 180 ------sq~EgcvvDd~~g~Lyv~eEd------~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLi 247 (355)
T 3amr_A 180 ------SQTEGMAADDEYGRLYIAEED------EAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLM 247 (355)
T ss_dssp ------SCEEEEEEETTTTEEEEEETT------TEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEE
T ss_pred ------CCcceEEEcCCCCeEEEeccc------ceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEE
Confidence 256678888887777776543 135555543 223333332 2 2246888888 56666 666
Q ss_pred EEeC-CC-EEEEEcC-CCceecce
Q psy7108 268 AATT-EG-VHIYSLD-SGYVFDPF 288 (703)
Q Consensus 268 s~s~-Dg-v~iwd~~-~~~~~~~~ 288 (703)
+++. +. ..+|+.+ +.+.+..+
T Consensus 248 vSsQG~~s~~Vydr~~~~~~vg~f 271 (355)
T 3amr_A 248 ASSQGNSSYAIYDRQGKNKYVADF 271 (355)
T ss_dssp EEEGGGTEEEEEESSTTCCEEEEE
T ss_pred EEcCCCCEEEEEECCCCCcEEEEE
Confidence 6663 34 8999996 44444333
No 285
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=96.93 E-value=0.041 Score=61.35 Aligned_cols=199 Identities=11% Similarity=0.020 Sum_probs=113.7
Q ss_pred EEEEcCCCCCCEEEEEeCC----------------CcEEEEEcCCCceeEEEecCC---------CcEEEEEEecCCC--
Q psy7108 52 CIEFSPVLSSTGMVSASWD----------------KTVKLWNAVETDTQHETIQLL---------SDALCVAYKPDGT-- 104 (703)
Q Consensus 52 ~l~~sp~~dg~~L~sgs~D----------------g~V~iWd~~~~~~~~~~~~~~---------~~V~~v~~spdg~-- 104 (703)
.+++.+ +...++.++.+ +.|..+|..+++......... ....-+...++|+
T Consensus 239 ~~a~d~--~~g~vy~~~g~~~~~~~~~~~gd~~y~~~v~Ald~~tG~~~W~~~~~~~d~~d~~~~~~p~l~~~~~~G~~~ 316 (571)
T 2ad6_A 239 WYAYDP--KLNLFYYGSGNPAPWNETMRPGDNKWTMTIWGRDLDTGMAKWGYQKTPHDEWDFAGVNQMVLTDQPVNGKMT 316 (571)
T ss_dssp CCEEET--TTTEEEEECCCCSCSCGGGSCSCCTTTTEEEEEETTTCCEEEEEESSTTCSSCCCCCCCCEEEEEEETTEEE
T ss_pred eEEEcC--CCCeEEEECCCCccccCCccCCCceeEEEEEEEecCCCcEEEEecCCCCcccccccCCCCEEEecccCCcEE
Confidence 356777 66667666532 258999999987665554321 1111223335774
Q ss_pred -EEEEEECCCeEEEEEcCCCcEEEEEeccccC--------CCCCCCC-----------ccchhhcccCCccEEEEEEcCC
Q psy7108 105 -EIVVATLDGQLIMFDVESAAQVGSVEARRDL--------DSGRLDT-----------DLVTREQSLKAKAVSTVCYSAD 164 (703)
Q Consensus 105 -~las~s~dg~I~vwd~~~~~~~~~~~~~~~~--------~~~~~~~-----------~~~~~~~~~~~~~V~~i~~spd 164 (703)
.++.++.+|.++++|..+|+.+...+..... ..++... .....+.......-..++++|+
T Consensus 317 ~~v~~~~~~G~l~~lD~~tG~~~w~~~~~~~~~w~~~~d~~~g~p~~~~~~~~~~~~~~~~~~P~~~Gg~~w~~~a~dp~ 396 (571)
T 2ad6_A 317 PLLSHIDRNGILYTLNRENGNLIVAEKVDPAVNVFKKVDLKTGTPVRDPEFATRMDHKGTNICPSAMGFHNQGVDSYDPE 396 (571)
T ss_dssp EEEEEECTTSEEEEEETTTCCEEEEEESSTTCCSEEEECTTTCSEEECGGGCCCTTCCEEEESSCTTCSSCSCBCEEETT
T ss_pred EEEEEeCCCcEEEEEECCCCCEEeeecccCCccccccccccCCceecccccCCCCCCCceEECCCCccccCCCCceECCC
Confidence 5677888999999999999988776543210 0000000 0000000000111134678888
Q ss_pred CCEEEEEe-------------------------------------cCCcEEEEECCCCceEEEEEeccCCccccccccce
Q psy7108 165 GSCILAAG-------------------------------------QSKYICIYSSREGILLKKFTITQNKSLDGINDFIN 207 (703)
Q Consensus 165 g~~l~s~s-------------------------------------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~ 207 (703)
...+++.+ .++.|..||+.+++.+-++.... .+.
T Consensus 397 ~g~~yv~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~~g~l~a~D~~tG~~~W~~~~~~---------~~~ 467 (571)
T 2ad6_A 397 SRTLYAGLNHICMDWEPFMLPYRAGQFFVGATLAMYPGPNGPTKKEMGQIRAFDLTTGKAKWTKWEKF---------AAW 467 (571)
T ss_dssp TTEEEEEEECEEEEEEECCCCCCTTSCCCCEEEEEEECTTSTTSCCCEEEEEECTTTCCEEEEEEESS---------CCC
T ss_pred CCEEEEEchhccccccccccccccCCccccccceeccCccccCCCCCCeEEEEECCCCCEEEEecCCC---------Ccc
Confidence 77776643 34789999999998877765322 122
Q ss_pred eeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccc-eEEEEEcCCCCEEE
Q psy7108 208 RRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVR-VFCVKFSPTGQAWV 267 (703)
Q Consensus 208 ~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~-V~~l~~spdg~~l~ 267 (703)
+..+...+..+++++.++ .++.+|.++|+.+.++...... -..+.+..+|+.++
T Consensus 468 ~~~~~t~gg~v~~g~~dg------~l~a~D~~tG~~lw~~~~~~~~~~~p~~~~~~G~~yv 522 (571)
T 2ad6_A 468 GGTLYTKGGLVWYATLDG------YLKALDNKDGKELWNFKMPSGGIGSPMTYSFKGKQYI 522 (571)
T ss_dssp SBCEEETTTEEEEECTTS------EEEEEETTTCCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred ceeEEECCCEEEEEcCCC------eEEEEECCCCCEEEEEeCCCCcEeeeEEEEECCEEEE
Confidence 223333455666665543 8999999999988776543211 12233556776543
No 286
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=96.93 E-value=0.0014 Score=75.21 Aligned_cols=204 Identities=6% Similarity=-0.055 Sum_probs=111.6
Q ss_pred cCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCC---ceeEEEec-CCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcC
Q psy7108 48 GPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVET---DTQHETIQ-LLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVE 121 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~---~~~~~~~~-~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~ 121 (703)
..+.+++|++ .+..|+.+ ...+.|+.+++.+. .....+.. .......+++.+.+..|+.+ ...+.|.+++++
T Consensus 406 ~~p~gla~d~--~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~d 483 (699)
T 1n7d_A 406 RNVVALDTEV--ASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 483 (699)
T ss_dssp TTCCCCEEET--TTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBSS
T ss_pred cceEEEcccc--ccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEecC
Confidence 4567889998 66666655 45578988888651 11111111 12234567887655544443 456789999987
Q ss_pred CCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCcc
Q psy7108 122 SAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSL 199 (703)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~ 199 (703)
.......+.... .....++++|++..|+.+.. .+.|..+++..... ..+...
T Consensus 484 g~~~~~l~~~~~--------------------~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG~~~-~~l~~~----- 537 (699)
T 1n7d_A 484 GVKRKTLFREQG--------------------SKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGVDI-YSLVTE----- 537 (699)
T ss_dssp SCCEEEECCCSS--------------------CCCCCEECCSSSSCCEECCCSSSCCEEBCCSSSCCC-CEESCS-----
T ss_pred CCceEEEEeCCC--------------------CCcceEEEccCCCcEEEcccCCCCeEEEEeCCCCCe-eEEEeC-----
Confidence 554333322111 13456889987665555432 26788877754322 222110
Q ss_pred ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecC--CccceEEEEEcCCCCEEEEEeC-CC-EE
Q psy7108 200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLK--PEVRVFCVKFSPTGQAWVAATT-EG-VH 275 (703)
Q Consensus 200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~--h~~~V~~l~~spdg~~l~s~s~-Dg-v~ 275 (703)
.....+.++++|++..++++.... ..|..+|+........... .-....++++..+ .|+.+.. .+ |.
T Consensus 538 --~l~~PnGlavd~~~~~LY~aD~~~-----~~I~~~d~dG~~~~~~~~~~~~~~~P~glavd~~--~lywtd~~~~~V~ 608 (699)
T 1n7d_A 538 --NIQWPNGITLDLLSGRLYWVDSKL-----HSISSIDVNGGNRKTILEDEKRLAHPFSLAVFED--KVFWTDIINEAIF 608 (699)
T ss_dssp --SCSSCCCEEECTTTCCEEEEETTT-----TEEEEECSSSSCCEEECCCSSSCSSCCCCEEETT--EEEEECSTTTCEE
T ss_pred --CCCCccEEEEeccCCEEEEEecCC-----CeEEEEccCCCceEEEEecCCcCCCceEeEEECC--EEEEEeCCCCeEE
Confidence 112456799999877666654332 3788888764322222111 1122445565443 5544444 34 88
Q ss_pred EEEcCCCceecce
Q psy7108 276 IYSLDSGYVFDPF 288 (703)
Q Consensus 276 iwd~~~~~~~~~~ 288 (703)
.++..+++....+
T Consensus 609 ~~d~~~G~~~~~i 621 (699)
T 1n7d_A 609 SANRLTGSDVNLL 621 (699)
T ss_dssp EEETTTEEEEECC
T ss_pred EEEccCCCceEEe
Confidence 9988777665443
No 287
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=96.92 E-value=0.43 Score=48.21 Aligned_cols=110 Identities=15% Similarity=0.207 Sum_probs=74.6
Q ss_pred EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEecc
Q psy7108 54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEAR 132 (703)
Q Consensus 54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~ 132 (703)
-.+| ..+.+|--. ..+++++|+++.+++... ...++|.-=.|-.+. .|+-.+ +..|+.|+++. ..+.+.++.|
T Consensus 73 IMnP--~~~ViALra-g~~LQiFnletK~klks~-~~~e~VvfWkWis~~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~ 146 (365)
T 2xzh_A 73 IMNP--ASKVIALKA-GKTLQIFNIEMKSKMKAH-TMTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 146 (365)
T ss_dssp EECS--SSSEEEEEE-TTEEEEEETTTTEEEEEE-ECSSCEEEEEECSSS-EEEEEE-SSEEEEEESSTTCCCEEEEECC
T ss_pred eeCC--CccEEEEec-CCeEEEechHHhhhhcce-ecCCccEEEEecCCC-eEEEEc-CCcEEEEcccCCCCCceeeecc
Confidence 4588 778777765 578999999998665544 345678888887544 454443 56899999974 4677788877
Q ss_pred ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-------cCCcEEEEECCCC
Q psy7108 133 RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-------QSKYICIYSSREG 185 (703)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-------~dg~I~lwD~~~~ 185 (703)
..+. +..|.....+++.++++..+ -.|.+.+|..+.+
T Consensus 147 ~~L~----------------~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~ 190 (365)
T 2xzh_A 147 SSLA----------------GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRK 190 (365)
T ss_dssp GGGT----------------TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTT
T ss_pred hhcc----------------cceEEEEEECCCCCEEEEEeEeccCCccceeEEEEeeccc
Confidence 6543 22566677777777766533 1256777776643
No 288
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=96.89 E-value=0.044 Score=56.23 Aligned_cols=175 Identities=9% Similarity=0.163 Sum_probs=109.7
Q ss_pred CceeeccCCCccccccccCCCcCeEEEEEcCCCCC----C---EEEE-EeC--CCcEEEEEcCC-CceeEEEec------
Q psy7108 27 GVKKGDMAARVLKPEVLSGHEGPVSCIEFSPVLSS----T---GMVS-ASW--DKTVKLWNAVE-TDTQHETIQ------ 89 (703)
Q Consensus 27 ~v~~~d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg----~---~L~s-gs~--Dg~V~iWd~~~-~~~~~~~~~------ 89 (703)
.+.++|.+|+.+ +.+.. +.++.+..-| +- . ++++ .-. +++|++|++.. ...+.....
T Consensus 51 gL~Vydl~G~~l--~~~~~--g~~nnVD~r~--~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~~l~~i~~~~~pv~ 124 (355)
T 3amr_A 51 GLVVYSLDGKML--HSYNT--GKLNNVDIRY--DFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNGTLQSMTDPDHPIA 124 (355)
T ss_dssp EEEEEETTSCEE--EEECC--SCEEEEEEEE--EEEETTEEEEEEEEEECSTTCCEEEEEEECTTTCCEEECSCTTSCEE
T ss_pred CEEEEcCCCcEE--EEccC--CCcccEEEec--ccccCCceEeEEEEeCCCCCCCeEEEEEECCCCCceeeccccccCcC
Confidence 366778899998 77764 6678888777 32 1 2333 333 57899998742 223333311
Q ss_pred CC-CcEEEEEE--ecC-CC-EEEEEECCCeEEEEEcC---CC----cEEEEEeccccCCCCCCCCccchhhcccCCccEE
Q psy7108 90 LL-SDALCVAY--KPD-GT-EIVVATLDGQLIMFDVE---SA----AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVS 157 (703)
Q Consensus 90 ~~-~~V~~v~~--spd-g~-~las~s~dg~I~vwd~~---~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~ 157 (703)
.. ..+..+|+ +|. ++ ++++...+|.+..|++. .+ +.++++... ..+.
T Consensus 125 t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~~~~~g~~~~~lVR~f~lg---------------------sq~E 183 (355)
T 3amr_A 125 TAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELKADKNGYISGKKVRAFKMN---------------------SQTE 183 (355)
T ss_dssp CCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEEECTTSCEEEEEEEEEECS---------------------SCEE
T ss_pred CCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEEeCCCCcccceEEEEecCC---------------------CCcc
Confidence 11 45677787 674 44 57778889999999882 33 445555442 2578
Q ss_pred EEEEcCCCCEEEEEecCCcEEEEECC-----CCceEEEEEeccCCccccccccceeeee--ccCCC-EEEEEcccCCCCC
Q psy7108 158 TVCYSADGSCILAAGQSKYICIYSSR-----EGILLKKFTITQNKSLDGINDFINRRKM--TEFGN-VSLIETRETHEGG 229 (703)
Q Consensus 158 ~i~~spdg~~l~s~s~dg~I~lwD~~-----~~~~~~~~~~~~~~~~~~~~~~v~~~~~--spdg~-~l~~~~~~~~~~~ 229 (703)
.+...+....|..+-.+.-|..+|.+ +++.+..+. . ......+..+++ .++++ ++++++...
T Consensus 184 gcvvDd~~g~Lyv~eEd~GIw~~da~p~~~~~~~~v~~~~---~---g~l~aDvEGLai~~~~~g~gyLivSsQG~---- 253 (355)
T 3amr_A 184 GMAADDEYGRLYIAEEDEAIWKFSAEPDGGSNGTVIDRAD---G---RHLTRDIEGLTIYYAADGKGYLMASSQGN---- 253 (355)
T ss_dssp EEEEETTTTEEEEEETTTEEEEEECSTTSCSCCEEEEEBS---S---SSBCSCEEEEEEEECGGGCEEEEEEEGGG----
T ss_pred eEEEcCCCCeEEEecccceEEEEeCCcCCCCCceEEEEec---C---CccccCcceEEEEecCCCCEEEEEEcCCC----
Confidence 89999988899999988778888855 233433321 1 112234666776 56777 566655432
Q ss_pred eeEEECCCCC
Q psy7108 230 NVVLKLPGVK 239 (703)
Q Consensus 230 ~~~i~iwd~~ 239 (703)
.+..+||..
T Consensus 254 -~s~~Vydr~ 262 (355)
T 3amr_A 254 -SSYAIYDRQ 262 (355)
T ss_dssp -TEEEEEESS
T ss_pred -CEEEEEECC
Confidence 378888875
No 289
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=96.89 E-value=0.15 Score=57.40 Aligned_cols=203 Identities=6% Similarity=-0.065 Sum_probs=115.3
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEe-CCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCC
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSAS-WDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVES 122 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs-~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~ 122 (703)
.-+...+++|++ .+..|+-+. ..+.|..+++........+.. .-.....+++.+.+..|+.+. ..+.|.+.+++.
T Consensus 38 ~~~~~~~ld~~~--~~~~ly~sD~~~~~I~r~~~~g~~~~~~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~~dG 115 (619)
T 3s94_A 38 GLEDAAAVDFVF--SHGLIYWSDVSEEAIKRTEFNKTESVQNVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 115 (619)
T ss_dssp CCSCEEEEEEET--TTTEEEEEETTTTEEEEEEC-----CEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred CCCceEEEEEEe--CCCEEEEEECCCCeEEEEEccCCCceEEEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEECCC
Confidence 345578999999 666666554 457788888865432223333 235788999999777666554 467899999875
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
......+...- .....+++.|.+..|..+.. .+.|...++..... ..+....
T Consensus 116 ~~~~~l~~~~l--------------------~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~~----- 169 (619)
T 3s94_A 116 SLRKVLFWQEL--------------------DQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR-FIIINSE----- 169 (619)
T ss_dssp CSCEEEECSSC--------------------SCCCCEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECSS-----
T ss_pred CCEEEEEeCCC--------------------CCCceEEEecCCCeEEEeccCCCCEEEEEECCCCce-EEEEeCC-----
Confidence 54332222111 13467899997666665542 35677777764332 2222111
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEE
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYS 278 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd 278 (703)
....+.++++++++.++++.... ..|...|+..........+.-....++++..+ .++.+... + |...+
T Consensus 170 --~~~P~Glald~~~~~LY~aD~~~-----~~I~~~~~dG~~~~~~~~~~~~~P~gi~~~~~--~ly~td~~~~~V~~~d 240 (619)
T 3s94_A 170 --IYWPNGLTLDYEEQKLYWADAKL-----NFIHKSNLDGTNRQAVVKGSLPHPFALTLFED--ILYWTDWSTHSILACN 240 (619)
T ss_dssp --CSSEEEEEEETTTTEEEEEETTT-----CCEEEESSSCCEEC---------CCCEEESSS--EEEEECTTTCSEEEEE
T ss_pred --CCCCcEEEEEccCCEEEEEeCCC-----CeEEEecCCCCccEEEEeCCCCCceEEEEeCC--EEEEecCCCCEEEEEE
Confidence 12557899999877766654332 36777777543322222211222346677555 55555443 3 88888
Q ss_pred cCCCcee
Q psy7108 279 LDSGYVF 285 (703)
Q Consensus 279 ~~~~~~~ 285 (703)
..+++..
T Consensus 241 ~~tg~~~ 247 (619)
T 3s94_A 241 KYTGEGL 247 (619)
T ss_dssp SSSCCCC
T ss_pred CCCCccc
Confidence 8777643
No 290
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.89 E-value=0.045 Score=62.19 Aligned_cols=116 Identities=14% Similarity=0.180 Sum_probs=71.5
Q ss_pred EEEEcCCCCCCEEEEEeCCC-----------cEEEEEcCCCcee--EEEec-CCCcEEEEEEecCCCEEEEEEC-CCeEE
Q psy7108 52 CIEFSPVLSSTGMVSASWDK-----------TVKLWNAVETDTQ--HETIQ-LLSDALCVAYKPDGTEIVVATL-DGQLI 116 (703)
Q Consensus 52 ~l~~sp~~dg~~L~sgs~Dg-----------~V~iWd~~~~~~~--~~~~~-~~~~V~~v~~spdg~~las~s~-dg~I~ 116 (703)
++++.|. ++++++.|+.++ .+.+||..++.-. ..... +.....++++.++|+.+++|+. +..+.
T Consensus 190 ~~av~~~-~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~ 268 (656)
T 1k3i_A 190 AAAIEPT-SGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTS 268 (656)
T ss_dssp EEEEETT-TTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEE
T ss_pred eEEEEec-CCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceE
Confidence 4455552 677888887543 5788998876522 11111 2233445778899999999984 45899
Q ss_pred EEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cC-----CcEEEEECCCCce
Q psy7108 117 MFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QS-----KYICIYSSREGIL 187 (703)
Q Consensus 117 vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~d-----g~I~lwD~~~~~~ 187 (703)
+||..+.+-...-. .... ..-.+++..++|+.++.|+ .+ ..+.+||..+.+.
T Consensus 269 ~yd~~t~~W~~~~~----~~~~---------------R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~W 326 (656)
T 1k3i_A 269 LYDSSSDSWIPGPD----MQVA---------------RGYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKTW 326 (656)
T ss_dssp EEEGGGTEEEECCC----CSSC---------------CSSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTEE
T ss_pred EecCcCCceeECCC----CCcc---------------ccccceEEecCCeEEEEeCcccCCcccccceEeCCCCCcc
Confidence 99998765332111 0000 0113455567888888887 34 4688999887654
No 291
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=96.81 E-value=0.037 Score=61.89 Aligned_cols=210 Identities=13% Similarity=0.095 Sum_probs=122.6
Q ss_pred CCEEEEEeC-CCcEEEEEc-CCCceeEEEecCCC-----------cEEEEEEecCCCE----EEEEECCCeEEEEEcCCC
Q psy7108 61 STGMVSASW-DKTVKLWNA-VETDTQHETIQLLS-----------DALCVAYKPDGTE----IVVATLDGQLIMFDVESA 123 (703)
Q Consensus 61 g~~L~sgs~-Dg~V~iWd~-~~~~~~~~~~~~~~-----------~V~~v~~spdg~~----las~s~dg~I~vwd~~~~ 123 (703)
+..++.++. ++.|..+|. .+++...+...... ....++++|.+.. +++++.|+.|.-+|..+|
T Consensus 62 ~g~vyv~~~~~~~v~AlD~~~tG~~lW~~~~~~~~~~~~~~~~~~~~~g~av~p~~g~~~~rV~v~t~dg~l~AlDa~TG 141 (599)
T 1w6s_A 62 DGKMYIHTSFPNNTFALGLDDPGTILWQDKPKQNPAARAVACCDLVNRGLAYWPGDGKTPALILKTQLDGNVAALNAETG 141 (599)
T ss_dssp TTEEEEECSTTTCEEEEETTCTTSEEEEECCCCCGGGGGGCSSCSCCCCCEEECCCSSSCCEEEEECTTSEEEEEETTTC
T ss_pred CCEEEEEeCCCCEEEEEeCCCCCcEEEEECCCCCccccccccccccccceEEEecCCcceeEEEEEcCCCEEEEEECCCC
Confidence 456777777 889999999 88876655432211 0123556554444 888889999999999999
Q ss_pred cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------cCCcEEEEECCCCceEEEEEeccCC
Q psy7108 124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------QSKYICIYSSREGILLKKFTITQNK 197 (703)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------~dg~I~lwD~~~~~~~~~~~~~~~~ 197 (703)
+.+-.......- ........++ + .++ .+++++ .++.|+.+|.++|+.+-++......
T Consensus 142 ~~~W~~~~~~~~-----------~~~~~~ssP~--v---~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~~W~~~~~~~~ 204 (599)
T 1w6s_A 142 ETVWKVENSDIK-----------VGSTLTIAPY--V---VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQVWRAYATGPD 204 (599)
T ss_dssp CEEEEEECCCGG-----------GTCBCCSCCE--E---ETT-EEEECCBCGGGTCCCEEEEEETTTCCEEEEEESSSCH
T ss_pred CEEEeecCCCCC-----------ccceeecCCE--E---ECC-EEEEEecccccCCCCeEEEEECCCCcEEEEEcCCCCc
Confidence 988665432200 0000000111 1 134 455544 3789999999999998777643221
Q ss_pred c---c---------------------c------cccccceeeeeccCCCEEEEEcccCC----------CCCeeEEECCC
Q psy7108 198 S---L---------------------D------GINDFINRRKMTEFGNVSLIETRETH----------EGGNVVLKLPG 237 (703)
Q Consensus 198 ~---~---------------------~------~~~~~v~~~~~spdg~~l~~~~~~~~----------~~~~~~i~iwd 237 (703)
. + . +-...-...++.++...+++++.+.. ..-...|.-+|
T Consensus 205 ~~~~~~p~~~~~~~~~g~~~~g~~tw~g~~~~~gg~~~W~~~a~d~~~g~vy~g~g~~~p~~~~~r~gd~~y~~sv~Ald 284 (599)
T 1w6s_A 205 KDLLLASDFNIKNPHYGQKGLGTGTWEGDAWKIGGGTNWGWYAYDPGTNLIYFGTGNPAPWNETMRPGDNKWTMTIFGRD 284 (599)
T ss_dssp HHHTBCTTTTTTCGGGCCTTHHHHTSSTTGGGGCCCCCCSCCEEETTTTEEEEECCCCSCSCGGGSCSCCTTSSEEEEEE
T ss_pred cccccccccccccccccccccccccCCCcceecCCCccccceeEeCCCCEEEEeCCCCccccCcccCCCccccceEEEEe
Confidence 0 0 0 00000013456667777777665420 00013688889
Q ss_pred CCCCccceeecC--Ccc-------ceEEEEEc-CCC---CEEEEEeCCC-EEEEEcCCCceecc
Q psy7108 238 VKKGDMAARVLK--PEV-------RVFCVKFS-PTG---QAWVAATTEG-VHIYSLDSGYVFDP 287 (703)
Q Consensus 238 ~~~~~~~~~~~~--h~~-------~V~~l~~s-pdg---~~l~s~s~Dg-v~iwd~~~~~~~~~ 287 (703)
.++|+.+-.+.. |+. ...-+... .+| ..++.++.+| +.++|..+|+.+-.
T Consensus 285 ~~TG~~~W~~q~~~~d~wd~d~~~~p~l~d~~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~lw~ 348 (599)
T 1w6s_A 285 ADTGEAKFGYQKTPHDEWDYAGVNVMMLSEQKDKDGKARKLLTHPDRNGIVYTLDRTDGALVSA 348 (599)
T ss_dssp TTTCCEEEEEESSTTCSSCCCCCCCCEEEEEECTTSCEEEEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCCCceeeEeecCCCccccccCCCccEEEeccccCCcEEEEEEEECCCcEEEEEECCCCCEeec
Confidence 999987655443 211 11112222 567 4567788899 99999999987543
No 292
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=96.71 E-value=0.053 Score=55.12 Aligned_cols=169 Identities=6% Similarity=0.032 Sum_probs=103.7
Q ss_pred cEEEEEEecCCCEEEEEE-CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE---cCCCCEE
Q psy7108 93 DALCVAYKPDGTEIVVAT-LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY---SADGSCI 168 (703)
Q Consensus 93 ~V~~v~~spdg~~las~s-~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~---spdg~~l 168 (703)
...+++|.+....+..++ ..++|..||...+..... .-. .+... ......+..+.| .|+++++
T Consensus 14 yPE~~~wd~~~g~~~vs~l~~g~V~~~~~~~~~~~~~-~~~-~~s~~-----------g~~~~~~sGl~~~~~D~~grL~ 80 (334)
T 2p9w_A 14 TPEDTIYDRTRQVFYQSNLYKGRIEVYNPKTQSHFNV-VID-GASSN-----------GDGEQQMSGLSLLTHDNSKRLF 80 (334)
T ss_dssp CCSCEEEETTTTEEEEEETTTTEEEEECTTTCCEEEE-CCT-TTCCS-----------SCCSEEEEEEEESSSSSCCEEE
T ss_pred CCcCccCcCCCCEEEEEeccCCEEEEEcCCCCeEEEE-ecC-Ccccc-----------CCCcceeeEEEEeccCCCCcEE
Confidence 445789988666666666 689999999976644333 111 00000 000114578999 6887777
Q ss_pred EEEe-------------cCCcEEEEECC---CCceEEEEEeccCCc----ccc-ccccceeeeeccCCCEEEEEccc-CC
Q psy7108 169 LAAG-------------QSKYICIYSSR---EGILLKKFTITQNKS----LDG-INDFINRRKMTEFGNVSLIETRE-TH 226 (703)
Q Consensus 169 ~s~s-------------~dg~I~lwD~~---~~~~~~~~~~~~~~~----~~~-~~~~v~~~~~spdg~~l~~~~~~-~~ 226 (703)
++.. .+..+..||+. +++.+.......... ..+ .....+.++..++|+.+++.+.. +
T Consensus 81 vv~~~~~af~~~g~~~~g~~~v~~~Dl~~~~tg~~~~~~dL~~~~~~~~~~~g~~~~~~nDvavD~~GnaYVt~s~~~~- 159 (334)
T 2p9w_A 81 AVMKNAKSFNFADQSSHGASSFHSFNLPLSENSKPVWSVNFEKVQDEFEKKAGKRPFGVVQSAQDRDGNSYVAFALGMP- 159 (334)
T ss_dssp EEEEETTTTCTTSCCSSSCCEEEEEESSCCTTCCCSEEEESHHHHHHHHHHHSSCCEEEEEEEECTTSCEEEEEEESSC-
T ss_pred EEEcccccccccccccCCCCEEEEEcCCcCCCCCEEEEecCccccccccccccccccCCceeEECCCCCEEEeCCCCCC-
Confidence 7543 25779999999 787766654321100 000 11247889999999988876654 3
Q ss_pred CCCeeEEECCCCCCCccceeec------CCccceEEEEEcCCCCEEEEEeCCC-EEEEEcCC
Q psy7108 227 EGGNVVLKLPGVKKGDMAARVL------KPEVRVFCVKFSPTGQAWVAATTEG-VHIYSLDS 281 (703)
Q Consensus 227 ~~~~~~i~iwd~~~~~~~~~~~------~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd~~~ 281 (703)
.|...+.... ...... ......+.++++|+|+.|++....+ +..+|+.+
T Consensus 160 -----~I~rV~pdG~-~~~~~~~~~~~~~~~~G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~ 215 (334)
T 2p9w_A 160 -----AIARVSADGK-TVSTFAWESGNGGQRPGYSGITFDPHSNKLIAFGGPRALTAFDVSK 215 (334)
T ss_dssp -----EEEEECTTSC-CEEEEEECCCCSSSCCSCSEEEEETTTTEEEEESSSSSEEEEECSS
T ss_pred -----eEEEEeCCCC-EEeeeeecCCCcccccCcceEEEeCCCCEEEEEcCCCeEEEEcCCC
Confidence 3444444322 111111 1122367899999999998887777 99999873
No 293
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.70 E-value=0.56 Score=52.67 Aligned_cols=199 Identities=8% Similarity=-0.085 Sum_probs=120.6
Q ss_pred CcCeEEEEEcCCCCCCEEE-EEeCCCcEEEEEcCCCceeEEEec-CCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCC
Q psy7108 47 EGPVSCIEFSPVLSSTGMV-SASWDKTVKLWNAVETDTQHETIQ-LLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESA 123 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~-sgs~Dg~V~iWd~~~~~~~~~~~~-~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~ 123 (703)
-....+++|++ .+..|+ +-..++.|+.+++.... ...+.. .......+++.+.+..|+.+. ..+.|.+.+++..
T Consensus 36 ~~~~~~l~~d~--~~~~lywtD~~~~~I~r~~~~g~~-~~~v~~~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~dG~ 112 (628)
T 4a0p_A 36 VKEASALDFDV--TDNRIYWTDISLKTISRAFMNGSA-LEHVVEFGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLDGQ 112 (628)
T ss_dssp CSCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCS-CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTST
T ss_pred CCceEEEEEEC--CCCEEEEEECCCCeEEEEECCCCC-cEEEEeCCCCCcceEEEEeCCCEEEEEECCCCEEEEEecCCC
Confidence 34678999999 555554 55567889888886543 233333 224577899988777665554 4678999998755
Q ss_pred cEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCcccc
Q psy7108 124 AQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLDG 201 (703)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~~ 201 (703)
.....+...- .....++++|....|..+.. .+.|...++.......... .
T Consensus 113 ~~~~l~~~~l--------------------~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG~~~~~l~~--~------ 164 (628)
T 4a0p_A 113 HRQVLVWKDL--------------------DSPRALALDPAEGFMYWTEWGGKPKIDRAAMDGSERTTLVP--N------ 164 (628)
T ss_dssp TCEEEECSSC--------------------CCEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSCEEEEC--S------
T ss_pred cEEEEEeCCC--------------------CCcccEEEccCCCeEEEeCCCCCCEEEEEeCCCCceEEEEC--C------
Confidence 4322221111 14689999996556665542 4678888877544332221 1
Q ss_pred ccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeC-CC-EEEEEc
Q psy7108 202 INDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATT-EG-VHIYSL 279 (703)
Q Consensus 202 ~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~-Dg-v~iwd~ 279 (703)
....+.++++++++.++++.... ..|...|+..... ..+...-....++++.. ..++.+.. .+ |...+.
T Consensus 165 -~~~P~GlalD~~~~~LY~aD~~~-----~~I~~~d~dG~~~-~v~~~~l~~P~glav~~--~~ly~tD~~~~~I~~~dk 235 (628)
T 4a0p_A 165 -VGRANGLTIDYAKRRLYWTDLDT-----NLIESSNMLGLNR-EVIADDLPHPFGLTQYQ--DYIYWTDWSRRSIERANK 235 (628)
T ss_dssp -CSSEEEEEEETTTTEEEEEETTT-----TEEEEEETTSCSC-EEEEECCSCEEEEEEET--TEEEEEETTTTEEEEEET
T ss_pred -CCCcceEEEccccCEEEEEECCC-----CEEEEEcCCCCce-EEeeccCCCceEEEEEC--CEEEEecCCCCEEEEEEC
Confidence 12567899999877776655432 3677777654432 22322233455777764 35555544 44 888887
Q ss_pred CCCcee
Q psy7108 280 DSGYVF 285 (703)
Q Consensus 280 ~~~~~~ 285 (703)
.+++..
T Consensus 236 ~tg~~~ 241 (628)
T 4a0p_A 236 TSGQNR 241 (628)
T ss_dssp TTCCSC
T ss_pred CCCCce
Confidence 777543
No 294
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=96.67 E-value=0.28 Score=50.05 Aligned_cols=165 Identities=6% Similarity=-0.078 Sum_probs=95.8
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCCCcE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL--DGQLIMFDVESAAQ 125 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~~~~ 125 (703)
....++++.+. ++.++++-...+.|.+.+++.................+++.|.+..|+.+.. .+.|...+++....
T Consensus 79 ~~p~glavd~~-~g~ly~~d~~~~~I~~~~~dG~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~~ 157 (318)
T 3sov_A 79 LSPDGLACDWL-GEKLYWTDSETNRIEVSNLDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSSR 157 (318)
T ss_dssp SCCCEEEEETT-TTEEEEEETTTTEEEEEETTSCSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCSC
T ss_pred CCccEEEEEcC-CCeEEEEECCCCEEEEEECCCCcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCCe
Confidence 34567888872 3445555556678999998654322222234456789999998777766653 57888888764332
Q ss_pred EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceEEEEEeccCCccccccc
Q psy7108 126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILLKKFTITQNKSLDGIND 204 (703)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~ 204 (703)
.......- .....++++|++..|..+. ..+.|..+|+..... +.+.... ..
T Consensus 158 ~~~~~~~l--------------------~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~~~-~~~~~~~-------~~ 209 (318)
T 3sov_A 158 FIIINSEI--------------------YWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTNR-QAVVKGS-------LP 209 (318)
T ss_dssp EEEECSSC--------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSC-EEEECSC-------CS
T ss_pred EEEEECCC--------------------CCccEEEEeccCCEEEEEECCCCEEEEEcCCCCce-EEEecCC-------CC
Confidence 22222111 1467899999777776664 457899999875332 2222101 11
Q ss_pred cceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec
Q psy7108 205 FINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL 248 (703)
Q Consensus 205 ~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~ 248 (703)
....+++. +..++++.... ..|..++..+|+....+.
T Consensus 210 ~P~glav~--~~~lywtd~~~-----~~V~~~~~~~G~~~~~i~ 246 (318)
T 3sov_A 210 HPFALTLF--EDILYWTDWST-----HSILACNKYTGEGLREIH 246 (318)
T ss_dssp CEEEEEEE--TTEEEEEETTT-----TEEEEEETTTCCSCEEEE
T ss_pred CceEEEEe--CCEEEEEecCC-----CeEEEEECCCCCceEEEe
Confidence 33455654 33444443221 367777776666554443
No 295
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.66 E-value=0.39 Score=51.94 Aligned_cols=134 Identities=13% Similarity=0.096 Sum_probs=74.7
Q ss_pred ceeeccCCCccccccccC----CCcCeEEEEE-------cCCCCCCEEEEEeCCC-------cEEEEEcCCCceeE----
Q psy7108 28 VKKGDMAARVLKPEVLSG----HEGPVSCIEF-------SPVLSSTGMVSASWDK-------TVKLWNAVETDTQH---- 85 (703)
Q Consensus 28 v~~~d~tg~~~~~~~l~g----H~~~V~~l~~-------sp~~dg~~L~sgs~Dg-------~V~iWd~~~~~~~~---- 85 (703)
++..|..++.+ .++.. .......++| ++ +++.|+.+...+ .|.+.+........
T Consensus 164 i~~ID~~~~~v--~~l~~~~~~~~~~p~~ia~~~~~~~~d~--~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~ 239 (496)
T 3kya_A 164 IQLIDLKNRML--SSPLNINTIPTNRIRSIAFNKKIEGYAD--EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSD 239 (496)
T ss_dssp EEEEETTTTEE--EEEECCTTSSCSBEEEEEECCCBTTTBC--TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSC
T ss_pred EEEEECCCCEE--EEEEccCccccCCCcEEEEeecccccCC--CCCEEEEEeCCCCCcccCceEEEEecCCCCceeeccc
Confidence 44556555444 33322 1235899999 99 898666665443 25555533311111
Q ss_pred -EEecCCCcEEEEEEecCCCEE-EEEECCCeEEEEEcC-------CCcE-----------EEEEeccccCCCCCCCCccc
Q psy7108 86 -ETIQLLSDALCVAYKPDGTEI-VVATLDGQLIMFDVE-------SAAQ-----------VGSVEARRDLDSGRLDTDLV 145 (703)
Q Consensus 86 -~~~~~~~~V~~v~~spdg~~l-as~s~dg~I~vwd~~-------~~~~-----------~~~~~~~~~~~~~~~~~~~~ 145 (703)
.....-.....++++|++..| ++-..++.|..+|++ ++.. ...+-...
T Consensus 240 ~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~------------ 307 (496)
T 3kya_A 240 IQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIA------------ 307 (496)
T ss_dssp EEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECS------------
T ss_pred ceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecC------------
Confidence 111111234577889955544 455567789999987 4543 11111000
Q ss_pred hhhcccCCccEEEEEEcCCCCEEEEE-ecCCcEEEEECC
Q psy7108 146 TREQSLKAKAVSTVCYSADGSCILAA-GQSKYICIYSSR 183 (703)
Q Consensus 146 ~~~~~~~~~~V~~i~~spdg~~l~s~-s~dg~I~lwD~~ 183 (703)
.......++|+|+|+.|..+ +....|+.+|..
T Consensus 308 ------~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 308 ------DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp ------SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred ------CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 01234789999999965554 456778886653
No 296
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=96.63 E-value=0.13 Score=53.18 Aligned_cols=187 Identities=14% Similarity=0.159 Sum_probs=108.7
Q ss_pred CeEEEEEcCCCCCCEEEEEe------------CCCcEEEEEcCCCc-ee--EEEec-----CCCcEEEEEEec--CCC-E
Q psy7108 49 PVSCIEFSPVLSSTGMVSAS------------WDKTVKLWNAVETD-TQ--HETIQ-----LLSDALCVAYKP--DGT-E 105 (703)
Q Consensus 49 ~V~~l~~sp~~dg~~L~sgs------------~Dg~V~iWd~~~~~-~~--~~~~~-----~~~~V~~v~~sp--dg~-~ 105 (703)
..-.+...| +|..+++++ .+|.|.++|..+.. .. ..... ..-....+.+.+ +|. +
T Consensus 51 G~EDi~~~~--~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~~~l~~~g~~~~~~~f~PhGi~~~~d~dg~~~ 128 (355)
T 3sre_A 51 GSEDLEILP--NGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAVSELEIIGNTLDISSFNPHGISTFIDDDNTVY 128 (355)
T ss_dssp CCCEEEECT--TSEEEEEECCC-----------CCEEEEEETTSSSCCEEECEEECSSCCGGGCCEEEEEEEECTTCCEE
T ss_pred CcceeEEcC--CCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCceEEEEccCCCCCcCceeeeeeEEEECCCCcEE
Confidence 345667788 776666652 68999999987432 12 12222 123567787766 454 4
Q ss_pred EEEEEC---CCeEEEEEcCCC-cEE---EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe------
Q psy7108 106 IVVATL---DGQLIMFDVESA-AQV---GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG------ 172 (703)
Q Consensus 106 las~s~---dg~I~vwd~~~~-~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s------ 172 (703)
|+++.. +.+|.+|+++.. ... ..+.+.. -...+.+++.++|.+.++..
T Consensus 129 L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~~-------------------~~~pND~~v~~~G~fyvt~~~~ftd~ 189 (355)
T 3sre_A 129 LLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHKL-------------------LPSVNDIVAVGPEHFYATNDHYFIDP 189 (355)
T ss_dssp EEEEECSTTCCEEEEEEEETTTTEEEEEEEECCTT-------------------CSSEEEEEEEETTEEEEEESCSCSSH
T ss_pred EEEEECCCCCCeEEEEEEECCCCEEEEEeccccCC-------------------CCCCceEEEeCCCCEEecCCcEeCCc
Confidence 544432 456778777543 222 2222211 22678999999998777643
Q ss_pred -----------cCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCC-
Q psy7108 173 -----------QSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKK- 240 (703)
Q Consensus 173 -----------~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~- 240 (703)
..+.|.-+|. ++....... -..-+.++||||++.++++.... ..|..|++..
T Consensus 190 ~~~~~e~~~~~~~g~vyr~d~--~~~~~~~~~---------l~~pNGia~spDg~~lYvadt~~-----~~I~~~~~~~~ 253 (355)
T 3sre_A 190 YLKSWEMHLGLAWSFVTYYSP--NDVRVVAEG---------FDFANGINISPDGKYVYIAELLA-----HKIHVYEKHAN 253 (355)
T ss_dssp HHHHHHHHTTCCCEEEEEECT--TCCEEEEEE---------ESSEEEEEECTTSSEEEEEEGGG-----TEEEEEEECTT
T ss_pred ccccchhhccCCccEEEEEEC--CeEEEeecC---------CcccCcceECCCCCEEEEEeCCC-----CeEEEEEECCC
Confidence 1244555554 322211111 12457899999999887766543 3788887653
Q ss_pred Cccc--eeecCCccceEEEEEcC-CCCEEEEEeCCC
Q psy7108 241 GDMA--ARVLKPEVRVFCVKFSP-TGQAWVAATTEG 273 (703)
Q Consensus 241 ~~~~--~~~~~h~~~V~~l~~sp-dg~~l~s~s~Dg 273 (703)
++.. ..+ ...+....+++.+ +|++.+++..++
T Consensus 254 g~l~~~~~~-~~~g~PDGi~vD~e~G~lwva~~~~g 288 (355)
T 3sre_A 254 WTLTPLRVL-SFDTLVDNISVDPVTGDLWVGCHPNG 288 (355)
T ss_dssp SCEEEEEEE-ECSSEEEEEEECTTTCCEEEEEESCH
T ss_pred CcEecCEEE-eCCCCCceEEEeCCCCcEEEEecCCc
Confidence 3221 122 2245678899999 599888776665
No 297
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=96.31 E-value=0.46 Score=54.80 Aligned_cols=121 Identities=7% Similarity=-0.111 Sum_probs=79.9
Q ss_pred CCcCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC--CCeEEEEEcCC
Q psy7108 46 HEGPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL--DGQLIMFDVES 122 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~--dg~I~vwd~~~ 122 (703)
.......|++.+ .+. ++++-...+.|.+.++............-.....|++.|.+..|+.+.. .+.|.+.+++.
T Consensus 469 ~l~~P~GLAvD~--~~~~LY~tD~~~~~I~v~~ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG 546 (791)
T 3m0c_C 469 DIQAPDGLAVDW--IHSNIYWTDSVLGTVSVADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 546 (791)
T ss_dssp SCSCCCEEEEET--TTTEEEEEETTTTEEEEEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS
T ss_pred CCCCcceeeeee--cCCcEEEEecCCCeEEEEeCCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC
Confidence 345567899988 554 5555566788999998655432222234456899999998777776653 26788888875
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-cCCcEEEEECCCCceE
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-QSKYICIYSSREGILL 188 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-~dg~I~lwD~~~~~~~ 188 (703)
......+...- .....|++++.+..|+.+. ..+.|...|+......
T Consensus 547 ~~~~~lv~~~l--------------------~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~~~~ 593 (791)
T 3m0c_C 547 VDIYSLVTENI--------------------QWPNGITLDLLSGRLYWVDSKLHSISSIDVNGGNRK 593 (791)
T ss_dssp CCEEEEECSSC--------------------SCEEEEEEETTTTEEEEEETTTTEEEEEETTSCSCE
T ss_pred CceEEEEeCCC--------------------CCceEEEEecCCCeEEEEeCCCCcEEEEecCCCceE
Confidence 54433332211 2578899998777777664 4567999998755443
No 298
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=96.30 E-value=0.18 Score=54.61 Aligned_cols=157 Identities=10% Similarity=0.122 Sum_probs=93.2
Q ss_pred cEEEEEEec-CCCEEEEEEC-CCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEE-------cC
Q psy7108 93 DALCVAYKP-DGTEIVVATL-DGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCY-------SA 163 (703)
Q Consensus 93 ~V~~v~~sp-dg~~las~s~-dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~-------sp 163 (703)
....++|+| ++..|+++.. .+.|++.|+.++........... .......++| ++
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~~~~-----------------~~~~p~~ia~~~~~~~~d~ 202 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNINTI-----------------PTNRIRSIAFNKKIEGYAD 202 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECCTTS-----------------SCSBEEEEEECCCBTTTBC
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEccCcc-----------------ccCCCcEEEEeecccccCC
Confidence 467899998 3555555443 46799999987776554433110 0125789999 99
Q ss_pred CCCEEEEEecCC-------cEEEEECCC-CceE-----EEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCe
Q psy7108 164 DGSCILAAGQSK-------YICIYSSRE-GILL-----KKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGN 230 (703)
Q Consensus 164 dg~~l~s~s~dg-------~I~lwD~~~-~~~~-----~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~ 230 (703)
+|+.|+++...+ .|.+++... +... ..+.. ......++++|++..++++....
T Consensus 203 ~G~~lyvad~~~~~~~~~~~V~~i~r~~~G~~~~~~~~~~v~~---------~~~p~giavdp~~g~LYvtd~~~----- 268 (496)
T 3kya_A 203 EAEYMIVAIDYDGKGDESPSVYIIKRNADGTFDDRSDIQLIAA---------YKQCNGATIHPINGELYFNSYEK----- 268 (496)
T ss_dssp TTCEEEEEECCCTTGGGEEEEEEEECCTTSCCSTTSCEEEEEE---------ESCCCCEEECTTTCCEEEEETTT-----
T ss_pred CCCEEEEEeCCCCCcccCceEEEEecCCCCceeecccceeecc---------CCCceEEEEcCCCCeEEEEECCC-----
Confidence 999777665543 266666433 2221 12210 01345688999666655544332
Q ss_pred eEEECCCCC-------CCcc-----------cee-ec-CCccceEEEEEcCCCCEEEEEeCCC--EEEEEcC
Q psy7108 231 VVLKLPGVK-------KGDM-----------AAR-VL-KPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLD 280 (703)
Q Consensus 231 ~~i~iwd~~-------~~~~-----------~~~-~~-~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~ 280 (703)
..|..+|+. ++.. ... .. +.......++|+|+|+.|..+.... |+.++.+
T Consensus 269 g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 269 GQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 368888887 4443 111 11 2234467899999999766665444 7776553
No 299
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=96.26 E-value=1.2 Score=46.67 Aligned_cols=192 Identities=13% Similarity=0.154 Sum_probs=112.4
Q ss_pred EEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEec
Q psy7108 53 IEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEA 131 (703)
Q Consensus 53 l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~ 131 (703)
.-.+| ..+.+|--. ..+++|+|+++..+..... ..++|.-=.|-.+. .|+.. .+..|+.|++.. ..+.+.++.
T Consensus 71 AIMnP--~~~iiALra-g~~lQiFnle~K~klks~~-~~e~VvfWkWis~~-~l~lV-T~taVyHWsi~~~s~P~kvFdR 144 (494)
T 1bpo_A 71 AIMNP--ASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALV-TDNAVYHWSMEGESQPVKMFDR 144 (494)
T ss_dssp EEECS--SSSCEEEEE-TTEEEEEETTTTEEEEEEE-CSSCCCEEEEEETT-EEEEE-CSSEEEEEESSSSCCCEEEEEC
T ss_pred eeeCC--CCcEEEEec-CCeEEEEchHHhhhhccee-cCCCceEEEecCCC-eEEEE-cCCeeEEecccCCCCchhheec
Confidence 44688 677777665 5799999999986655544 34567666776443 45444 367899999974 467778887
Q ss_pred cccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe-------cCCcEEEEECCCCceEEEEEecc---------
Q psy7108 132 RRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG-------QSKYICIYSSREGILLKKFTITQ--------- 195 (703)
Q Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s-------~dg~I~lwD~~~~~~~~~~~~~~--------- 195 (703)
|..+. +..|.....+++.++++..+ -.|.+.+|..+.+.. +.+++|.
T Consensus 145 ~~~L~----------------~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er~~s-Q~ieGhaa~F~~~~~~ 207 (494)
T 1bpo_A 145 HSSLA----------------GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKVS-QPIEGHAASFAQFKME 207 (494)
T ss_dssp CGGGT----------------TCEEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTTCCE-EEECCSEEEEEEEECT
T ss_pred chhcc----------------cceEEEEEECCCCCeEEEEeecccCCcccceEEEeecccccc-chheeeeeeeEEEecC
Confidence 76543 22566666777777766432 125566776654321 0111000
Q ss_pred -------------------------------------------CCccccccccceeeeeccCCCEEEEEcccCCCCCeeE
Q psy7108 196 -------------------------------------------NKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVV 232 (703)
Q Consensus 196 -------------------------------------------~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~ 232 (703)
....+...+.-.++..|+.-..+++-+..| .
T Consensus 208 g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPvamqvs~kygviyviTK~G------~ 281 (494)
T 1bpo_A 208 GNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYG------Y 281 (494)
T ss_dssp TCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTCCEEEEEEETTTTEEEEEETTS------E
T ss_pred CCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccCceeEEEecccCCEEEEEecCc------e
Confidence 011122233444566666666666666554 8
Q ss_pred EECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC
Q psy7108 233 LKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG 273 (703)
Q Consensus 233 i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg 273 (703)
++++|+.++.++..-.-....|...+-+....-++.....|
T Consensus 282 i~lyDleTgt~i~~nrIs~~~iF~t~~~~~~~Gi~~Vnr~G 322 (494)
T 1bpo_A 282 IHLYDLETGTCIYMNRISGETIFVTAPHEATAGIIGVNRKG 322 (494)
T ss_dssp EEEEETTTCCEEEEEECCSSCEEEEEEETTTTEEEEEETTC
T ss_pred EEEEecccceeeeeecccCCceEEecccCCCCcEEEEccCc
Confidence 99999999988765543344443333333333344444444
No 300
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.23 E-value=0.083 Score=60.00 Aligned_cols=214 Identities=9% Similarity=-0.005 Sum_probs=113.8
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeC-CCcEEEEEcCCCceeEEEec--CCCcEEEEEEecCCCEEEEEE-CC-----CeEEE
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASW-DKTVKLWNAVETDTQHETIQ--LLSDALCVAYKPDGTEIVVAT-LD-----GQLIM 117 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~-Dg~V~iWd~~~~~~~~~~~~--~~~~V~~v~~spdg~~las~s-~d-----g~I~v 117 (703)
.....++++.+ ++.+++.|+. ++.+.+||..+..- ..... ....-.+++..++|+.++.|+ .+ ..+.+
T Consensus 242 ~~~~~~~~~~~--~g~lyv~GG~~~~~v~~yd~~t~~W-~~~~~~~~~R~~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 242 DMFCPGISMDG--NGQIVVTGGNDAKKTSLYDSSSDSW-IPGPDMQVARGYQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp CCSSCEEEECT--TSCEEEECSSSTTCEEEEEGGGTEE-EECCCCSSCCSSCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred CCccccccCCC--CCCEEEeCCCCCCceEEecCcCCce-eECCCCCccccccceEEecCCeEEEEeCcccCCcccccceE
Confidence 33445677888 8999999984 45899999876632 11111 111223456667999999988 34 46999
Q ss_pred EEcCCCcEEEEEecc--ccCCCCCC----------------CCc------------------cchhhccc---------C
Q psy7108 118 FDVESAAQVGSVEAR--RDLDSGRL----------------DTD------------------LVTREQSL---------K 152 (703)
Q Consensus 118 wd~~~~~~~~~~~~~--~~~~~~~~----------------~~~------------------~~~~~~~~---------~ 152 (703)
||..+.+-... ... ......+. ... .+...... .
T Consensus 319 yd~~t~~W~~~-~~~~~~p~~~~~~~~~~~~~~~iyv~Gg~~g~~~~~~~~~~v~~yd~~~~~w~~~~~~~~~~~~~~~~ 397 (656)
T 1k3i_A 319 YSPSSKTWTSL-PNAKVNPMLTADKQGLYRSDNHAWLFGWKKGSVFQAGPSTAMNWYYTSGSGDVKSAGKRQSNRGVAPD 397 (656)
T ss_dssp EETTTTEEEEE-TTSCSGGGCCCCTTGGGTTTCSCCEEECGGGCEEECCSSSEEEEEECSTTCEEEEEEECEETTEECCC
T ss_pred eCCCCCcceeC-CCccccccccccccceeecCCceEEEECCCCcEEEecCccceeeeecCCcceeecCCccccccccCCC
Confidence 99987754322 100 00000000 000 00000000 0
Q ss_pred CccEEEEEEcC-CCCEEEEEecCC-----------cEEEEECCCCceEEEE--EeccCCccccccccceeeeeccCCCEE
Q psy7108 153 AKAVSTVCYSA-DGSCILAAGQSK-----------YICIYSSREGILLKKF--TITQNKSLDGINDFINRRKMTEFGNVS 218 (703)
Q Consensus 153 ~~~V~~i~~sp-dg~~l~s~s~dg-----------~I~lwD~~~~~~~~~~--~~~~~~~~~~~~~~v~~~~~spdg~~l 218 (703)
...-.++.|.. +++.++.|+.++ .|.+||..+.+..... ..+.. ..-.+.+..|+|+.+
T Consensus 398 ~~~~~av~~~~~~~~i~v~GG~~~~~~~~~~~~~~~v~~yd~~~~~W~~~~~~~mp~~-------R~~~~~~~l~~g~i~ 470 (656)
T 1k3i_A 398 AMCGNAVMYDAVKGKILTFGGSPDYQDSDATTNAHIITLGEPGTSPNTVFASNGLYFA-------RTFHTSVVLPDGSTF 470 (656)
T ss_dssp CBTCEEEEEETTTTEEEEECCBSSSSSSBCCCCEEEEECCSTTSCCEEEECTTCCSSC-------CBSCEEEECTTSCEE
T ss_pred CCCCceEeccCCCCeEEEEeCCCCCCCCCcCCcceEEEcCCCCCCCeeEEccCCCCCC-------cccCCeEECCCCCEE
Confidence 01123344433 677777777432 6788888876544332 11111 122344667899988
Q ss_pred EEEcccCCC-----CCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeC
Q psy7108 219 LIETRETHE-----GGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATT 271 (703)
Q Consensus 219 ~~~~~~~~~-----~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~ 271 (703)
++++.+... .....+.+||..+.+-. ...........+..+.|||+.++.|+.
T Consensus 471 v~GG~~~~~~~~~~~~~~~v~~ydp~t~~W~~~~~~~~~R~~hs~a~ll~dg~v~v~GG~ 530 (656)
T 1k3i_A 471 ITGGQRRGIPFEDSTPVFTPEIYVPEQDTFYKQNPNSIVRVYHSISLLLPDGRVFNGGGG 530 (656)
T ss_dssp EECCBSBCCTTCCCSBCCCCEEEEGGGTEEEECCCCSSCCCTTEEEEECTTSCEEEEECC
T ss_pred EECCcccCcCcCCCCcccceEEEcCCCCceeecCCCCCccccccHhhcCCCcEEEecCCC
Confidence 887754211 11246788887765422 111122222334556799999999885
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=96.09 E-value=0.75 Score=46.90 Aligned_cols=193 Identities=10% Similarity=0.074 Sum_probs=100.5
Q ss_pred CCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCC-CceeEEE-ecCCCcEEEEEEecCCCEEEEEECCCeEEE-EEcCC
Q psy7108 46 HEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVE-TDTQHET-IQLLSDALCVAYKPDGTEIVVATLDGQLIM-FDVES 122 (703)
Q Consensus 46 H~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~-~~~~~~~-~~~~~~V~~v~~spdg~~las~s~dg~I~v-wd~~~ 122 (703)
+.+.+.++.+.+ ++..++.+. +|.| |...+ ++.-... ......+..+++.|++..++++. ++.+.. .|- .
T Consensus 120 ~~~~~~~i~~~~--~~~~~~~~~-~g~v--~~S~DgG~tW~~~~~~~~~~~~~~~~~~~~~~~~~g~-~G~~~~S~d~-g 192 (327)
T 2xbg_A 120 LPGSPRLIKALG--NGSAEMITN-VGAI--YRTKDSGKNWQALVQEAIGVMRNLNRSPSGEYVAVSS-RGSFYSTWEP-G 192 (327)
T ss_dssp CSSCEEEEEEEE--TTEEEEEET-TCCE--EEESSTTSSEEEEECSCCCCEEEEEECTTSCEEEEET-TSSEEEEECT-T
T ss_pred CCCCeEEEEEEC--CCCEEEEeC-CccE--EEEcCCCCCCEEeecCCCcceEEEEEcCCCcEEEEEC-CCcEEEEeCC-C
Confidence 345678888877 676666554 5544 32222 3222222 23456789999999988777664 444433 332 1
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
++.-..+... ....+..+++.++++.++ ++.+|.+++.+...++.-...... .+ ..
T Consensus 193 G~tW~~~~~~-------------------~~~~~~~~~~~~~g~~~~-~~~~G~~~~s~~D~G~tW~~~~~~---~~-~~ 248 (327)
T 2xbg_A 193 QTAWEPHNRT-------------------TSRRLHNMGFTPDGRLWM-IVNGGKIAFSDPDNSENWGELLSP---LR-RN 248 (327)
T ss_dssp CSSCEEEECC-------------------SSSCEEEEEECTTSCEEE-EETTTEEEEEETTEEEEECCCBCT---TS-SC
T ss_pred CCceeECCCC-------------------CCCccceeEECCCCCEEE-EeCCceEEEecCCCCCeeEeccCC---cc-cC
Confidence 2211111110 122678899999987654 455677777642223221111110 00 01
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec---CCccceEEEEEcCCCCEEEEEeCCC-EEEEE
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL---KPEVRVFCVKFSPTGQAWVAATTEG-VHIYS 278 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~---~h~~~V~~l~~spdg~~l~s~s~Dg-v~iwd 278 (703)
...+..+.+.+++..++++... .+ ++....|+.-.... .....+.++.|.++++ +++++.+| +.-++
T Consensus 249 ~~~~~~v~~~~~~~~~~~g~~g-------~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~-~~~~G~~G~i~~~~ 319 (327)
T 2xbg_A 249 SVGFLDLAYRTPNEVWLAGGAG-------AL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQ-GFILGQKGILLRYV 319 (327)
T ss_dssp CSCEEEEEESSSSCEEEEESTT-------CE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTE-EEEECSTTEEEEEC
T ss_pred CcceEEEEecCCCEEEEEeCCC-------eE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCc-eEEEcCCceEEEEc
Confidence 1246778888888776665432 23 12222232222222 2235678888875554 66667788 54443
No 302
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=96.07 E-value=1.9 Score=48.42 Aligned_cols=199 Identities=7% Similarity=-0.047 Sum_probs=115.1
Q ss_pred cCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEec------CCCcEEEEEEecCCCEEEEE-ECCCeEEEEE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQ------LLSDALCVAYKPDGTEIVVA-TLDGQLIMFD 119 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~------~~~~V~~v~~spdg~~las~-s~dg~I~vwd 119 (703)
..+.+++|.+ ....|+-+ ...+.|+.++.........+.. ....+..+++...++.|..+ +..+.|.+.+
T Consensus 340 ~~~~~ld~d~--~~~~iy~sD~~~~~I~r~~~~g~~~~~v~~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~~ 417 (628)
T 4a0p_A 340 RNVRAIDYDP--LDKQLYWIDSRQNMIRKAQEDGSQGFTVVVSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVTR 417 (628)
T ss_dssp SCEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEEC--------CCCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEec--CCCeEEEEecCcceEEEEEcCCCCceEEEEcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEEE
Confidence 4578999998 55555554 4567788888754432222221 23468899999987766544 4567899999
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcC-CCCEEEEEecCC--cEEEEECCCCceEEEEEeccC
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSA-DGSCILAAGQSK--YICIYSSREGILLKKFTITQN 196 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~sp-dg~~l~s~s~dg--~I~lwD~~~~~~~~~~~~~~~ 196 (703)
++ |+....+.... ......+++.| .|..+.+-.... .|...++..... ..+....
T Consensus 418 ~~-G~~~~~l~~~~-------------------l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG~~~-~~l~~~~- 475 (628)
T 4a0p_A 418 LD-GRSVGVVLKGE-------------------QDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDGTER-EVLFFSG- 475 (628)
T ss_dssp TT-SCEEEEEEECT-------------------TCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTSCSC-EEEECSS-
T ss_pred CC-CCeEEEEEeCC-------------------CCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCCCCc-EEEEecc-
Confidence 86 44444443211 12578999999 555444432222 577777664332 2222111
Q ss_pred CccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec-CCccceEEEEEcCCCCEEEEEeCCC--
Q psy7108 197 KSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL-KPEVRVFCVKFSPTGQAWVAATTEG-- 273 (703)
Q Consensus 197 ~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~-~h~~~V~~l~~spdg~~l~s~s~Dg-- 273 (703)
....+.++++++++.++++.... ..|...++... ....+. ..-....+++... ..+..+....
T Consensus 476 ------l~~P~gla~D~~~~~LYw~D~~~-----~~I~~~~~dG~-~r~~~~~~~~~~P~glav~~--~~ly~tD~~~~~ 541 (628)
T 4a0p_A 476 ------LSKPIALALDSRLGKLFWADSDL-----RRIESSDLSGA-NRIVLEDSNILQPVGLTVFE--NWLYWIDKQQQM 541 (628)
T ss_dssp ------CSCEEEEEEETTTTEEEEEETTT-----TEEEEEETTSC-SCEEEECSSCSCEEEEEEET--TEEEEEETTTTE
T ss_pred ------CCCccEEEEeCCCCEEEEEeCCC-----CEEEEEeCCCC-ceEEEEcCCCCCcEEEEEEC--CEEEEEECCCCe
Confidence 12557899999877766654321 25666666433 233332 2233456777654 3555555443
Q ss_pred EEEEEcCCCce
Q psy7108 274 VHIYSLDSGYV 284 (703)
Q Consensus 274 v~iwd~~~~~~ 284 (703)
|...+..+|+.
T Consensus 542 i~~~~k~~G~~ 552 (628)
T 4a0p_A 542 IEKIDMTGREG 552 (628)
T ss_dssp EEEEETTSSSC
T ss_pred EEEEECcCCCC
Confidence 77778776654
No 303
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=95.85 E-value=0.0033 Score=64.01 Aligned_cols=56 Identities=20% Similarity=0.127 Sum_probs=46.7
Q ss_pred chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
++.+.++.++..++.+++++||||||+.++..++...|...++|+.+|.++|...-
T Consensus 116 ~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~~G 171 (316)
T 3icv_A 116 YMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDYKG 171 (316)
T ss_dssp HHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCTTC
T ss_pred HHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCCCC
Confidence 46678999999999889999999999999877777656556789999999987543
No 304
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=95.78 E-value=1.6 Score=48.80 Aligned_cols=198 Identities=6% Similarity=-0.092 Sum_probs=111.1
Q ss_pred cCeEEEEEcCCCCCCEEEEE-eCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEE-ECCCeEEEEEcCCCcE
Q psy7108 48 GPVSCIEFSPVLSSTGMVSA-SWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVA-TLDGQLIMFDVESAAQ 125 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sg-s~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~-s~dg~I~vwd~~~~~~ 125 (703)
..+.+++|.+ .+..|+.+ ...+.|+.+++............-.....+++.+.+..|+.+ +..+.|.+.+++....
T Consensus 349 ~~~~~ld~d~--~~~~ly~sD~~~~~I~r~~~~g~~~~~v~~~~~~~p~GlAvD~~~~~lY~tD~~~~~I~v~~~~G~~~ 426 (619)
T 3s94_A 349 RHAIAIDYDP--VEGYIYWTDDEVRAIRRSFIDGSGSQFVVTAQIAHPDGIAVDWVARNLYWTDTGTDRIEVTRLNGTMR 426 (619)
T ss_dssp SSEEEEEEET--TTTEEEEEETTTTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCSC
T ss_pred CccEEEEEEc--CCCeEEEEeCCCCeEEEEEcCCCccEEEEECCCCCcCceEEecccCcEEEEeCCCCcEEEEeCCCCeE
Confidence 4567899998 55555544 456788888886543322222233567789998766655555 4467899999875533
Q ss_pred EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec--CCcEEEEECCCCceEEEEEeccCCcccccc
Q psy7108 126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ--SKYICIYSSREGILLKKFTITQNKSLDGIN 203 (703)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~--dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~ 203 (703)
...+... -.....+++.|....|..+.. ...|...++..... ..+... ..
T Consensus 427 ~~l~~~~--------------------l~~P~~iavdp~~G~ly~tD~g~~~~I~r~~~dG~~~-~~l~~~-------~l 478 (619)
T 3s94_A 427 KILISED--------------------LEEPRAIVLDPMVGYMYWTDWGEIPKIERAALDGSDR-VVLVNT-------SL 478 (619)
T ss_dssp EEEECTT--------------------CCSEEEEEEETTTTEEEEEECSSSCEEEEEETTSCSC-EEEECS-------SC
T ss_pred EEEEECC--------------------CCCeeeEEEEcCCCcEEEecCCCCCEEEEEccCCCcc-EEEEeC-------CC
Confidence 2222111 125789999997545554432 35677777664332 222211 11
Q ss_pred ccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCC--EEEEEcCC
Q psy7108 204 DFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEG--VHIYSLDS 281 (703)
Q Consensus 204 ~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg--v~iwd~~~ 281 (703)
...+.+++++++..++++.... ..|...++............-....+++...+ .|..+.... |...+..+
T Consensus 479 ~~P~GlalD~~~~~LY~aD~~~-----~~I~~~~~dG~~~~~~~~~~l~~P~glav~~~--~ly~tD~~~~~I~~~~k~~ 551 (619)
T 3s94_A 479 GWPNGLALDYDEGKIYWGDAKT-----DKIEVMNTDGTGRRVLVEDKIPHIFGFTLLGD--YVYWTDWQRRSIERVHKRS 551 (619)
T ss_dssp SCEEEEEEETTTTEEEEEETTT-----TEEEEEESSSCCCEEEEECCCCSSCCEEEETT--EEEEECTTSSCEEEEESSS
T ss_pred CCCeeeEEcccCCEEEEEECCC-----CEEEEEecCCCceEEEeccCCCCcEEEEEECC--EEEEeecCCCeEEEEEcCC
Confidence 2567899998777666654321 25666666433222111221222345555433 665555444 77777776
Q ss_pred C
Q psy7108 282 G 282 (703)
Q Consensus 282 ~ 282 (703)
+
T Consensus 552 g 552 (619)
T 3s94_A 552 A 552 (619)
T ss_dssp C
T ss_pred C
Confidence 6
No 305
>4hvt_A Ritya.17583.B, post-proline cleaving enzyme; ssgcid, structural genomics, S structural genomics center for infectious disease; 1.70A {Rickettsia typhi}
Probab=95.68 E-value=0.00085 Score=76.68 Aligned_cols=59 Identities=20% Similarity=0.061 Sum_probs=43.1
Q ss_pred hcccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhhcc
Q psy7108 525 ELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG 586 (703)
Q Consensus 525 ~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~ 586 (703)
...+.|+.++++|+.+.. ..++++++|||+||+++..++++.|+ .++..++.+|+..+.
T Consensus 536 ~~~~~D~~aav~~L~~~~~~d~~rI~i~G~S~GG~la~~~a~~~pd---~f~a~V~~~pv~D~~ 596 (711)
T 4hvt_A 536 QTAFNDFFAVSEELIKQNITSPEYLGIKGGSNGGLLVSVAMTQRPE---LFGAVACEVPILDMI 596 (711)
T ss_dssp HHHHHHHHHHHHHHHHTTSCCGGGEEEEEETHHHHHHHHHHHHCGG---GCSEEEEESCCCCTT
T ss_pred cCcHHHHHHHHHHHHHcCCCCcccEEEEeECHHHHHHHHHHHhCcC---ceEEEEEeCCccchh
Confidence 344568889999999774 34799999999999988776665443 466667777765443
No 306
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=95.64 E-value=0.0022 Score=66.89 Aligned_cols=56 Identities=14% Similarity=0.078 Sum_probs=42.1
Q ss_pred eeeecchHHHHHHHHhhCCCCceE-EEEeChhHHHHHHHhcCCchHHHHHHHhee-ccccc
Q psy7108 607 QVGLYDTTATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEYQTKVRLNVL-WAQSA 665 (703)
Q Consensus 607 e~~~~d~pa~i~~i~~~t~~~~~~-~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~-l~p~~ 665 (703)
.+...|+.+.+..++...+.++++ ++|||+|+++++.++..+|+ +++.+++ +++..
T Consensus 126 ~~~~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 183 (377)
T 3i1i_A 126 VFTFLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPH---MVERMIGVITNPQ 183 (377)
T ss_dssp CCCHHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTT---TBSEEEEESCCSB
T ss_pred CCCHHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChH---HHHHhcccCcCCC
Confidence 334455556677777778888886 99999999999999998886 4667777 55544
No 307
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=95.56 E-value=0.036 Score=63.41 Aligned_cols=178 Identities=8% Similarity=-0.015 Sum_probs=100.2
Q ss_pred CcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEE-CCCeEEEEEcCCC----cEEEEEeccccCCCCCCCCccc
Q psy7108 71 KTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVAT-LDGQLIMFDVESA----AQVGSVEARRDLDSGRLDTDLV 145 (703)
Q Consensus 71 g~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s-~dg~I~vwd~~~~----~~~~~~~~~~~~~~~~~~~~~~ 145 (703)
+.|+..++.+.. ...+......+..++|++.+..|+.+. ..+.|+.+++.+. .....+..
T Consensus 386 ~~I~~id~~~~~-~~~~~~~~~~p~gla~d~~~~~Ly~sD~~~~~I~~~~~~g~~~~~~~~~~i~~-------------- 450 (699)
T 1n7d_A 386 HEVRKMTLDRSE-YTSLIPNLRNVVALDTEVASNRIYWSDLSQRMICSTQLDRAHGVSSYDTVISR-------------- 450 (699)
T ss_dssp TC-CEECTTSCC-EECCSCCCTTCCCCEEETTTTEEEECCTTTTSBEEEESCCCCC-CCCCCBCCS--------------
T ss_pred cceEEEeCCCCc-ceeeeccCcceEEEccccccCeEEEEecCCCeEEEEecCCCCCCcceEEEEeC--------------
Confidence 567777776553 233333345567899999877776654 3578888888752 11100000
Q ss_pred hhhcccCCccEEEEEEcCCCCEEE-EEecCCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEccc
Q psy7108 146 TREQSLKAKAVSTVCYSADGSCIL-AAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRE 224 (703)
Q Consensus 146 ~~~~~~~~~~V~~i~~spdg~~l~-s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~ 224 (703)
.......+++.+.+..|+ +-...+.|.++++...... .+.... ......++++|.+..++++...
T Consensus 451 ------~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~dg~~~~-~l~~~~-------~~~P~giavDp~~g~ly~td~~ 516 (699)
T 1n7d_A 451 ------DIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTKGVKRK-TLFREQ-------GSKPRAIVVDPVHGFMYWTDWG 516 (699)
T ss_dssp ------CC--CCCEECCCSSSBCEECCTTTSCEEEEBSSSCCEE-EECCCS-------SCCCCCEECCSSSSCCEECCCS
T ss_pred ------CCCCcceEEEEeeCCcEEEEeccCCeEEEEecCCCceE-EEEeCC-------CCCcceEEEccCCCcEEEcccC
Confidence 001234578876544444 4345678999998755433 222111 1134678899977666665432
Q ss_pred CCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCC
Q psy7108 225 THEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDS 281 (703)
Q Consensus 225 ~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~ 281 (703)
. ...|...++............-.....|+|+|++..|+.+... + |.+++++.
T Consensus 517 ~----~~~I~~~~~dG~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 517 T----PAKIKKGGLNGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNG 571 (699)
T ss_dssp S----SCCEEBCCSSSCCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSS
T ss_pred C----CCeEEEEeCCCCCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCC
Confidence 1 1367777765432221111222346789999987777655544 3 88888864
No 308
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=95.53 E-value=0.0046 Score=63.60 Aligned_cols=57 Identities=19% Similarity=0.239 Sum_probs=47.9
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCC
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNL 670 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~ 670 (703)
-|+-+.++++....+..+++++|||+|+.+++.++..+|+ +++.+++++|+......
T Consensus 116 ~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~ 172 (342)
T 3hju_A 116 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG---HFAGMVLISPLVLANPE 172 (342)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCCCSCCTT
T ss_pred HHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCcc---ccceEEEECcccccchh
Confidence 4788899998888777789999999999999999888775 58899999998766543
No 309
>3i1i_A Homoserine O-acetyltransferase; structural genomics, IDP01610, O-acetyltransfera bacillus anthracis; HET: MSE; 2.44A {Bacillus anthracis str}
Probab=95.29 E-value=0.0024 Score=66.55 Aligned_cols=42 Identities=17% Similarity=0.150 Sum_probs=29.0
Q ss_pred cCCchhhHHHhHccCCCcceE-EEEEecCceeeeeccCCCchh
Q psy7108 528 LYDTTATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEY 569 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~-~~g~S~G~~~~~~~~~~~~~~ 569 (703)
+.|..+.+..++..-+.+++. ++|||+||..++....+.|+.
T Consensus 129 ~~~~~~d~~~~l~~l~~~~~~ilvGhS~Gg~ia~~~a~~~p~~ 171 (377)
T 3i1i_A 129 FLDVARMQCELIKDMGIARLHAVMGPSAGGMIAQQWAVHYPHM 171 (377)
T ss_dssp HHHHHHHHHHHHHHTTCCCBSEEEEETHHHHHHHHHHHHCTTT
T ss_pred HHHHHHHHHHHHHHcCCCcEeeEEeeCHhHHHHHHHHHHChHH
Confidence 334445555566555667886 999999999887766666543
No 310
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=95.27 E-value=0.29 Score=49.05 Aligned_cols=192 Identities=9% Similarity=0.056 Sum_probs=95.3
Q ss_pred CCCEEEEEeCC-----CcEEEEEcCCCce--eEEEec--CCCcEEEEEEecCCCEEEEEECC-----CeEEEEEcCCCcE
Q psy7108 60 SSTGMVSASWD-----KTVKLWNAVETDT--QHETIQ--LLSDALCVAYKPDGTEIVVATLD-----GQLIMFDVESAAQ 125 (703)
Q Consensus 60 dg~~L~sgs~D-----g~V~iWd~~~~~~--~~~~~~--~~~~V~~v~~spdg~~las~s~d-----g~I~vwd~~~~~~ 125 (703)
++.+++.|+.+ ..+.+||..+... -..... ....-.+++. .+++.++.|+.+ ..+.+||+.+.+-
T Consensus 62 ~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~W~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W 140 (301)
T 2vpj_A 62 HDRIYVIGGYDGRSRLSSVECLDYTADEDGVWYSVAPMNVRRGLAGATT-LGDMIYVSGGFDGSRRHTSMERYDPNIDQW 140 (301)
T ss_dssp TTEEEEECCBCSSCBCCCEEEEETTCCTTCCCEEECCCSSCCBSCEEEE-ETTEEEEECCBCSSCBCCEEEEEETTTTEE
T ss_pred CCEEEEEcCCCCCccCceEEEEECCCCCCCeeEECCCCCCCccceeEEE-ECCEEEEEcccCCCcccceEEEEcCCCCeE
Confidence 56778888755 3588899877640 111111 1111112222 267777777654 3588899887654
Q ss_pred EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCCccc
Q psy7108 126 VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
...-.... . .....++.+ +++.++.|+.+ ..+.+||+.+.+-...-..+..
T Consensus 141 ~~~~~~p~----~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~---- 196 (301)
T 2vpj_A 141 SMLGDMQT----A--------------REGAGLVVA--SGVIYCLGGYDGLNILNSVEKYDPHTGHWTNVTPMATK---- 196 (301)
T ss_dssp EEEEECSS----C--------------CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEEECCCSSC----
T ss_pred EECCCCCC----C--------------cccceEEEE--CCEEEEECCCCCCcccceEEEEeCCCCcEEeCCCCCcc----
Confidence 33211100 0 001122222 56777777654 4589999988754433111111
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccce--eecCCccceEEEEEcCCCCEEEEEeCCC-----
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAA--RVLKPEVRVFCVKFSPTGQAWVAATTEG----- 273 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~--~~~~h~~~V~~l~~spdg~~l~s~s~Dg----- 273 (703)
.....+..-+++.+++++.++ ......+.+||..+.+-.. ...........+.+ +++.++.|+.++
T Consensus 197 ----r~~~~~~~~~~~i~v~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~ 269 (301)
T 2vpj_A 197 ----RSGAGVALLNDHIYVVGGFDG-TAHLSSVEAYNIRTDSWTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLS 269 (301)
T ss_dssp ----CBSCEEEEETTEEEEECCBCS-SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEE
T ss_pred ----cccceEEEECCEEEEEeCCCC-CcccceEEEEeCCCCcEEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccc
Confidence 111112223566666665443 2213467888887653222 11111122222222 566667776542
Q ss_pred -EEEEEcCCCc
Q psy7108 274 -VHIYSLDSGY 283 (703)
Q Consensus 274 -v~iwd~~~~~ 283 (703)
+.+||..+.+
T Consensus 270 ~v~~yd~~~~~ 280 (301)
T 2vpj_A 270 SIECYDPIIDS 280 (301)
T ss_dssp EEEEEETTTTE
T ss_pred cEEEEcCCCCe
Confidence 5678876654
No 311
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.27 E-value=0.92 Score=46.84 Aligned_cols=113 Identities=10% Similarity=0.039 Sum_probs=63.1
Q ss_pred CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CC
Q psy7108 90 LLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GS 166 (703)
Q Consensus 90 ~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~ 166 (703)
.-.....++|.|||+.+ ++..++.|++++ +++.. .+.... + ..........++++|+ +.
T Consensus 29 ~l~~P~~ia~~pdG~l~-V~e~~g~I~~i~--~g~~~-~~~~~~-v-------------~~~g~~~p~gia~~pdf~~~g 90 (352)
T 2ism_A 29 GLEVPWALAFLPDGGML-IAERPGRIRLFR--EGRLS-TYAELS-V-------------YHRGESGLLGLALHPRFPQEP 90 (352)
T ss_dssp CCSCEEEEEECTTSCEE-EEETTTEEEEEE--TTEEE-EEEECC-C-------------CCSTTCSEEEEEECTTTTTSC
T ss_pred CCCCceEEEEcCCCeEE-EEeCCCeEEEEE--CCCcc-Eeecce-E-------------eecCCCCceeEEECCCCCCCC
Confidence 34457899999999854 556779999998 44422 111110 0 0001235789999998 55
Q ss_pred EEEEEec-C-----CcEEEEECCCCceE---EEEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108 167 CILAAGQ-S-----KYICIYSSREGILL---KKFTITQNKSLDGINDFINRRKMTEFGNVSLIET 222 (703)
Q Consensus 167 ~l~s~s~-d-----g~I~lwD~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 222 (703)
.|.++.. . +.|..++...+... ..+..-....-..| ....++|.|||..+++.+
T Consensus 91 ~lYv~~~~~~~~~~~~v~r~~~~~~~~~~~~~l~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G 153 (352)
T 2ism_A 91 YVYAYRTVAEGGLRNQVVRLRHLGERGVLDRVVLDGIPARPHGLH--SGGRIAFGPDGMLYVTTG 153 (352)
T ss_dssp EEEEEEEECTTSSEEEEEEEEECSSCEEEEEEEEEEECCCTTCCC--CCCCEEECTTSCEEEECC
T ss_pred EEEEEEecCCCCCccEEEEEEeCCCCcCceEEEEEeCCCCCCCCc--CCceEEECCCCCEEEEEC
Confidence 5555433 2 56888887754221 11111110000111 346899999997655543
No 312
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=95.12 E-value=2.9 Score=42.93 Aligned_cols=70 Identities=13% Similarity=0.131 Sum_probs=46.1
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------cCCCcEEEEEEecC---CCEEEEEEC-C-----
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------QLLSDALCVAYKPD---GTEIVVATL-D----- 112 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------~~~~~V~~v~~spd---g~~las~s~-d----- 112 (703)
..-.+++|.| +|.++++ ..+|.|++++ ++. ...+. ........++|+|+ +..|.++.. +
T Consensus 31 ~~P~~ia~~p--dG~l~V~-e~~g~I~~i~--~g~-~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~~ 104 (352)
T 2ism_A 31 EVPWALAFLP--DGGMLIA-ERPGRIRLFR--EGR-LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGLR 104 (352)
T ss_dssp SCEEEEEECT--TSCEEEE-ETTTEEEEEE--TTE-EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSSE
T ss_pred CCceEEEEcC--CCeEEEE-eCCCeEEEEE--CCC-ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCCc
Confidence 3457999999 9986655 4568898888 332 22111 12456899999998 555555433 2
Q ss_pred CeEEEEEcCCC
Q psy7108 113 GQLIMFDVESA 123 (703)
Q Consensus 113 g~I~vwd~~~~ 123 (703)
+.|..++...+
T Consensus 105 ~~v~r~~~~~~ 115 (352)
T 2ism_A 105 NQVVRLRHLGE 115 (352)
T ss_dssp EEEEEEEECSS
T ss_pred cEEEEEEeCCC
Confidence 57888887654
No 313
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=94.97 E-value=0.0095 Score=61.11 Aligned_cols=55 Identities=20% Similarity=0.157 Sum_probs=45.2
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.++.+.+++++...+..++++||||||+.++..++...|....+|+.+|+++|..
T Consensus 81 ~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~~ 135 (317)
T 1tca_A 81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135 (317)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCCC
Confidence 4677889999998888899999999999998877776554446789999999864
No 314
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=94.88 E-value=0.012 Score=63.28 Aligned_cols=56 Identities=14% Similarity=0.021 Sum_probs=46.6
Q ss_pred ecchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108 610 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG 668 (703)
Q Consensus 610 ~~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~ 668 (703)
..|+.++++++.+..+ .+++++||||+|+.+++.++..+|+ +++.+++++|+.-+.
T Consensus 127 ~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p~---~v~~iv~l~pa~p~~ 184 (432)
T 1gpl_A 127 GAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLNG---LVGRITGLDPAEPYF 184 (432)
T ss_dssp HHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTTT---CSSEEEEESCBCTTT
T ss_pred HHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccc---ccceeEEeccccccc
Confidence 3688999999987766 6789999999999999988888763 578889999886543
No 315
>3icv_A Lipase B, CALB; circular permutation, cleavage on PAIR of basic residues, glycoprotein, hydrolase, lipid degradation, zymogen, disulf; HET: NAG BTB; 1.49A {Candida antarctica} PDB: 3icw_A*
Probab=94.79 E-value=0.0022 Score=65.34 Aligned_cols=55 Identities=20% Similarity=0.159 Sum_probs=40.2
Q ss_pred CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
.++.+.+++++...+.+++.++||||||..+..++.+.+...++++.++.++|..
T Consensus 115 ~~la~~I~~l~~~~g~~~v~LVGHSmGGlvA~~al~~~p~~~~~V~~lV~lapp~ 169 (316)
T 3icv_A 115 EYMVNAITTLYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 169 (316)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECHHHHHHHHHHHhccccchhhceEEEECCCC
Confidence 3456678888888887899999999999876544444343346788888887753
No 316
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.75 E-value=4.4 Score=41.67 Aligned_cols=71 Identities=10% Similarity=-0.015 Sum_probs=45.8
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe------cCCCcEEEEEEecC---CCEEEEEEC----C-
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI------QLLSDALCVAYKPD---GTEIVVATL----D- 112 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~------~~~~~V~~v~~spd---g~~las~s~----d- 112 (703)
-..-.+++|.| +|+++++ ..+|.|++++ .++. ..+. ........++++|+ +..|.++.. +
T Consensus 28 l~~P~~ia~~p--dG~l~V~-e~~g~I~~~d-~~G~--~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~ 101 (354)
T 3a9g_A 28 LEVPWSIAPLG--GGRYLVT-ERPGRLVLIS-PSGK--KLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGG 101 (354)
T ss_dssp CSCEEEEEEEE--TTEEEEE-ETTTEEEEEC-SSCE--EEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGG
T ss_pred CCCCeEEEEcC--CCeEEEE-eCCCEEEEEe-CCCc--eEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCC
Confidence 34568999999 8885555 5568898887 3443 2221 12356899999998 555554433 3
Q ss_pred ---CeEEEEEcCCC
Q psy7108 113 ---GQLIMFDVESA 123 (703)
Q Consensus 113 ---g~I~vwd~~~~ 123 (703)
..|..|+....
T Consensus 102 ~~~~~v~r~~~~~~ 115 (354)
T 3a9g_A 102 HIRNRVIRGRLDGS 115 (354)
T ss_dssp CEEEEEEEEEECSS
T ss_pred CcceEEEEEEECCC
Confidence 56777877654
No 317
>1tca_A Lipase; hydrolase(carboxylic esterase); HET: NAG; 1.55A {Candida antarctica} SCOP: c.69.1.17 PDB: 1lbs_A* 1lbt_A* 1tcb_A* 1tcc_A*
Probab=94.74 E-value=0.0024 Score=65.64 Aligned_cols=54 Identities=20% Similarity=0.174 Sum_probs=37.4
Q ss_pred CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.++.+.+++++...+.+++.++|||+||..+..++.+.+....+++.++.++|.
T Consensus 81 ~~l~~~i~~~~~~~g~~~v~lVGhS~GG~va~~~~~~~~~~~~~v~~lV~l~~~ 134 (317)
T 1tca_A 81 EYMVNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPD 134 (317)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEEETHHHHHHHHHHHHCGGGTTTEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEEChhhHHHHHHHHHcCccchhhhEEEEECCC
Confidence 456677888887777789999999999976644333333223567777776664
No 318
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=94.59 E-value=2.3 Score=42.71 Aligned_cols=192 Identities=5% Similarity=-0.001 Sum_probs=108.4
Q ss_pred ccCCCccccccccCCCcCeEEEEEcCCCCCCEEEEEeCC--------------CcEEEEEcCCCceeEEEecCCCcEEEE
Q psy7108 32 DMAARVLKPEVLSGHEGPVSCIEFSPVLSSTGMVSASWD--------------KTVKLWNAVETDTQHETIQLLSDALCV 97 (703)
Q Consensus 32 d~tg~~~~~~~l~gH~~~V~~l~~sp~~dg~~L~sgs~D--------------g~V~iWd~~~~~~~~~~~~~~~~V~~v 97 (703)
+.+|... ..+... .+--+++ ++++|+-+... ..|+..++...+ ...+... . +.
T Consensus 43 ~~dg~~~--~~l~~~----~~~~i~~--~g~~Iyy~~~~~~~~~~~~~~~~n~~~Iy~i~~dg~~-~~~l~~~--~--~~ 109 (302)
T 3s25_A 43 NIDGSNI--HKLSND----TAMYINA--DKNYVYYVRNNNQKITSQTFFSYDRNSLCRIKRNGHG-STVLDPD--P--CI 109 (302)
T ss_dssp ETTSCSC--EEEEEE----EEEEEEE--CSSEEEEEEECC------CCSSCCSEEEEEEETTSCC-CEEEECS--C--EE
T ss_pred cCCCCCC--EEccCC----ceeeEEE--cCCEEEEEECCCCcccccceeccCCCeEEEEeCCCCc-ceEeecC--C--cc
Confidence 3456544 555532 2345678 88988877543 356666766553 2222222 1 23
Q ss_pred EEecCCCEEEEEE----CCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec
Q psy7108 98 AYKPDGTEIVVAT----LDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ 173 (703)
Q Consensus 98 ~~spdg~~las~s----~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~ 173 (703)
.|+++++.|+... .+..|...+++.... ..+..+. + .+++|+++.|.-.+.
T Consensus 110 ~~s~~g~~Iy~~~~~~~~~~~Iy~~~~dGs~~-~~lt~~~----------------------~--~~~~~~g~~iy~t~~ 164 (302)
T 3s25_A 110 YASLIGNYIYYLHYDTQTATSLYRIRIDGEEK-KKIKNHY----------------------L--FTCNTSDRYFYYNNP 164 (302)
T ss_dssp EEEEETTEEEEEEESSSSCEEEEEEETTSCCC-EEEESSC----------------------C--CCSEEETTEEEEECT
T ss_pred EEEEeCCEEEEEeecCCCCceEEEEECCCCCe-EEEeCCC----------------------c--eEeeEECCEEEEEeC
Confidence 6788999998876 234566667764433 3333221 1 346778888886655
Q ss_pred -CCcEEEEECCCCceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCcc
Q psy7108 174 -SKYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEV 252 (703)
Q Consensus 174 -dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~ 252 (703)
...|...++..+.....+. . ... ..++|++..++.....+. ..|..-++..... ..+.. .
T Consensus 165 g~~~Iy~~~l~g~~~~~l~~---~--------~~~-~~~~P~g~~iy~t~~~~~----~~I~~~~ldG~~~-~~Lt~--~ 225 (302)
T 3s25_A 165 KNGQLYRYDTASQSEALFYD---C--------NCY-KPVVLDDTNVYYMDVNRD----NAIVHVNINNPNP-VVLTE--A 225 (302)
T ss_dssp TTCCEEEEETTTTEEEEEEC---S--------CEE-EEEEEETTEEEEEEGGGT----TEEEEECSSSCCC-EECSC--S
T ss_pred CCceEEEEECCCCCEEEEeC---C--------Ccc-ceeeecCCEEEEEEcCCC----cEEEEEECCCCCe-EEEeC--C
Confidence 5678888987765443322 1 111 235699998888765421 2454445554442 22322 1
Q ss_pred ceEEEEEcCCCCEEEEEeCC--C-EEEEEcCCC
Q psy7108 253 RVFCVKFSPTGQAWVAATTE--G-VHIYSLDSG 282 (703)
Q Consensus 253 ~V~~l~~spdg~~l~s~s~D--g-v~iwd~~~~ 282 (703)
.+ ..|+|++++|..++.. + |..-+++..
T Consensus 226 ~~--~~~~~~g~~Iy~~~~~~~~~i~~~~~DG~ 256 (302)
T 3s25_A 226 NI--EHYNVYGSLIFYQRGGDNPALCVVKNDGT 256 (302)
T ss_dssp CE--EEEEEETTEEEEEECSSSCEEEEEETTSC
T ss_pred Cc--ceEEECCCEEEEEECCCCcEEEEEECCCC
Confidence 23 3478889988765332 2 666666543
No 319
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=94.49 E-value=0.0025 Score=60.92 Aligned_cols=52 Identities=21% Similarity=0.165 Sum_probs=38.7
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
..|+.++++|+....+..++.++|||+||..++.+..+. +++..+..+|...
T Consensus 94 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~v~~~v~~~~~~~ 145 (220)
T 2fuk_A 94 QDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-----EPQVLISIAPPAG 145 (220)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-----CCSEEEEESCCBT
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc-----cccEEEEeccccc
Confidence 467788899999876667999999999998776655421 5666666666543
No 320
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=94.35 E-value=2.2 Score=43.98 Aligned_cols=167 Identities=13% Similarity=0.141 Sum_probs=87.1
Q ss_pred cEEEEEEecCCCEEEEE------------ECCCeEEEEEcCC--CcEEEEEecccc-CCCCCCCCccchhhcccCCccEE
Q psy7108 93 DALCVAYKPDGTEIVVA------------TLDGQLIMFDVES--AAQVGSVEARRD-LDSGRLDTDLVTREQSLKAKAVS 157 (703)
Q Consensus 93 ~V~~v~~spdg~~las~------------s~dg~I~vwd~~~--~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~V~ 157 (703)
...+++..|+|..++++ ..+|.|.++|.++ ++. ..+.-... + ........
T Consensus 51 G~EDi~~~~~G~~~~s~~~~~pg~~~~~~~~~G~I~~~d~~~~~~~~-~~l~~~g~~~--------------~~~~f~Ph 115 (355)
T 3sre_A 51 GSEDLEILPNGLAFISSGLKYPGIMSFDPDKSGKILLMDLNEKEPAV-SELEIIGNTL--------------DISSFNPH 115 (355)
T ss_dssp CCCEEEECTTSEEEEEECCC-----------CCEEEEEETTSSSCCE-EECEEECSSC--------------CGGGCCEE
T ss_pred CcceeEEcCCCeEEEEeccccCCCcccCCCCCCeEEEEecCCCCCce-EEEEccCCCC--------------CcCceeee
Confidence 44556667766544443 2689999999874 232 22221100 0 00011345
Q ss_pred EEEEcC--CCC-EEEEEe-c--CCcEEEEECCCC-ceEEEEEeccCCccccccccceeeeeccCCCEEEEEcccCCC---
Q psy7108 158 TVCYSA--DGS-CILAAG-Q--SKYICIYSSREG-ILLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETRETHE--- 227 (703)
Q Consensus 158 ~i~~sp--dg~-~l~s~s-~--dg~I~lwD~~~~-~~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~--- 227 (703)
.+.+.+ ++. +|+++. . +.+|.+|++... ........-... .....+.+++.++|.+++.....-.+
T Consensus 116 Gi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~~~~~~~~~g~----~~~~pND~~v~~~G~fyvt~~~~ftd~~~ 191 (355)
T 3sre_A 116 GISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKSLLHLKTIRHK----LLPSVNDIVAVGPEHFYATNDHYFIDPYL 191 (355)
T ss_dssp EEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTEEEEEEEECCT----TCSSEEEEEEEETTEEEEEESCSCSSHHH
T ss_pred eeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCEEEEEeccccC----CCCCCceEEEeCCCCEEecCCcEeCCccc
Confidence 566654 454 444443 2 456888777653 222222111111 11356889999999877665421000
Q ss_pred --------CCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCC-C-EEEEEcCC
Q psy7108 228 --------GGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTE-G-VHIYSLDS 281 (703)
Q Consensus 228 --------~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~D-g-v~iwd~~~ 281 (703)
.....+..+|.. + .......-...+.++||||++.|..+... + |..|+++.
T Consensus 192 ~~~e~~~~~~~g~vyr~d~~--~-~~~~~~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~ 252 (355)
T 3sre_A 192 KSWEMHLGLAWSFVTYYSPN--D-VRVVAEGFDFANGINISPDGKYVYIAELLAHKIHVYEKHA 252 (355)
T ss_dssp HHHHHHTTCCCEEEEEECTT--C-CEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred ccchhhccCCccEEEEEECC--e-EEEeecCCcccCcceECCCCCEEEEEeCCCCeEEEEEECC
Confidence 111345555542 2 22222223457889999999988766654 4 89999863
No 321
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=94.29 E-value=0.017 Score=56.89 Aligned_cols=50 Identities=14% Similarity=0.153 Sum_probs=41.3
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-|+-+.++++... ..+++++|||+|+.+++.++..+|+ ++.+++++|...
T Consensus 95 ~d~~~~i~~l~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 144 (270)
T 3rm3_A 95 ASVEEGYGWLKQR--CQTIFVTGLSMGGTLTLYLAEHHPD----ICGIVPINAAVD 144 (270)
T ss_dssp HHHHHHHHHHHTT--CSEEEEEEETHHHHHHHHHHHHCTT----CCEEEEESCCSC
T ss_pred HHHHHHHHHHHhh--CCcEEEEEEcHhHHHHHHHHHhCCC----ccEEEEEcceec
Confidence 4677888887766 5689999999999999998888776 888888888653
No 322
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=94.26 E-value=0.0034 Score=59.49 Aligned_cols=51 Identities=16% Similarity=0.166 Sum_probs=38.1
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.++++|+...-+..++.++|||+||..++... ..| +++..+..+|..
T Consensus 88 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~----~v~~~v~~~~~~ 138 (208)
T 3trd_A 88 VEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ----KVAQLISVAPPV 138 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS----CCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC----CccEEEEecccc
Confidence 456778889998875568999999999998777655 333 566666666643
No 323
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=94.25 E-value=2.1 Score=44.91 Aligned_cols=143 Identities=14% Similarity=0.223 Sum_probs=86.0
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCceeEEEecCC-----CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcE---------
Q psy7108 60 SSTGMVSASWDKTVKLWNAVETDTQHETIQLL-----SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQ--------- 125 (703)
Q Consensus 60 dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~-----~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~--------- 125 (703)
+|..++.+- ++.||.-++.... ..+..... ..+..+..+|+|++||..+ +..|.|..+..+..
T Consensus 31 n~t~i~~a~-~n~iR~~~i~~~~-~Yk~L~~~~~i~f~~i~qlvlSpsG~lLAl~g-~~~V~Vv~LP~~~~~~~~~~~~~ 107 (452)
T 3pbp_A 31 NGTRIVFIQ-DNIIRWYNVLTDS-LYHSLNFSRHLVLDDTFHVISSTSGDLLCLFN-DNEIFVMEVPWGYSNVEDVSIQD 107 (452)
T ss_dssp TTTEEEEEE-TTEEEEEETTTCS-SCEEEECTTTCCCCTTCEEEECTTSSEEEEEC-SSEEEEEECCTTCSCCCCHHHHH
T ss_pred CCCEEEEEE-CCEEEEEECCCCC-cceEEecCcccccCceeEEEECCCCCEEEEec-CCeEEEEEecCccccCccccccc
Confidence 666666664 3688887876443 23333322 3678899999999999885 56899998873321
Q ss_pred ---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEEEEEecCCcEEEEECCCCc--eEEEEEeccC-
Q psy7108 126 ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCILAAGQSKYICIYSSREGI--LLKKFTITQN- 196 (703)
Q Consensus 126 ---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l~s~s~dg~I~lwD~~~~~--~~~~~~~~~~- 196 (703)
...+.-.. .......+|..+.|+|- +..|++-..|+.|++||+.... +. .+....+
T Consensus 108 ~~q~~ty~l~~--------------~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~-~L~k~~~~ 172 (452)
T 3pbp_A 108 AFQIFHYSIDE--------------EEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPI-VLNKPNNS 172 (452)
T ss_dssp TTEEEEEEGGG--------------CC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCE-EESCCCSE
T ss_pred ccceeEEEcCC--------------cccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCc-chhccccc
Confidence 11111110 00112457999999994 5789999999999999998632 22 2321111
Q ss_pred CccccccccceeeeeccCCCEEEE
Q psy7108 197 KSLDGINDFINRRKMTEFGNVSLI 220 (703)
Q Consensus 197 ~~~~~~~~~v~~~~~spdg~~l~~ 220 (703)
...+.....+.+++|.+++-.+++
T Consensus 173 fg~d~~~~ev~S~~Fg~~~lTLYv 196 (452)
T 3pbp_A 173 FGLDARVNDITDLEFSKDGLTLYC 196 (452)
T ss_dssp EESCSSCCCEEEEEECTTSSCEEE
T ss_pred cCCCcccceEEEEEEcCCCcEEEE
Confidence 112222345667777765443333
No 324
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=94.24 E-value=1.7 Score=44.76 Aligned_cols=110 Identities=12% Similarity=0.050 Sum_probs=62.2
Q ss_pred CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCE
Q psy7108 91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSC 167 (703)
Q Consensus 91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~ 167 (703)
-.....++|.|+|+ |+++..++.|+++| .+++ ..+..-. +. .........++++|+ +..
T Consensus 28 l~~P~~ia~~pdG~-l~V~e~~g~I~~~d-~~G~--~~~~~~~-v~-------------~~g~~g~~gia~~pdf~~~g~ 89 (354)
T 3a9g_A 28 LEVPWSIAPLGGGR-YLVTERPGRLVLIS-PSGK--KLVASFD-VA-------------NVGEAGLLGLALHPEFPKKSW 89 (354)
T ss_dssp CSCEEEEEEEETTE-EEEEETTTEEEEEC-SSCE--EEEEECC-CC-------------CSTTCSEEEEEECTTTTTSCE
T ss_pred CCCCeEEEEcCCCe-EEEEeCCCEEEEEe-CCCc--eEeeccc-ee-------------ecCCCceeeEEeCCCCCcCCE
Confidence 45678999999997 55556779999997 3454 2222110 00 001235789999998 555
Q ss_pred EEEEec----C----CcEEEEECCCC--ce--EE-EEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108 168 ILAAGQ----S----KYICIYSSREG--IL--LK-KFTITQNKSLDGINDFINRRKMTEFGNVSLIET 222 (703)
Q Consensus 168 l~s~s~----d----g~I~lwD~~~~--~~--~~-~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 222 (703)
|.++.. + +.|..|+.... .. .+ .+..-.. ...| ....++|.|||..+++.+
T Consensus 90 lyv~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~l~~~~~~--~~~h--~~~~l~~~pDG~Lyvt~G 153 (354)
T 3a9g_A 90 VYLYASYFAEGGHIRNRVIRGRLDGSTFKLKEVKTLIDGIPG--AYIH--NGGRIRFGPDGMLYITTG 153 (354)
T ss_dssp EEEEEEEECGGGCEEEEEEEEEECSSSCCEEEEEEEEEEEEC--CSSC--CCCCEEECTTSCEEEECC
T ss_pred EEEEEeccCCCCCcceEEEEEEECCCCcCcCccEEEEEcCCC--CCCc--CCceEEECCCCcEEEEEC
Confidence 555433 3 56778887654 11 11 1111111 0111 346799999998666543
No 325
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=94.16 E-value=0.55 Score=47.11 Aligned_cols=191 Identities=12% Similarity=0.119 Sum_probs=95.2
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCceeEEEecCCC--cEEEEEEecCCCEEEEEECC------CeEEEEEcCCCcEEE
Q psy7108 60 SSTGMVSASWD----KTVKLWNAVETDTQHETIQLLS--DALCVAYKPDGTEIVVATLD------GQLIMFDVESAAQVG 127 (703)
Q Consensus 60 dg~~L~sgs~D----g~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~~las~s~d------g~I~vwd~~~~~~~~ 127 (703)
++.+++.|+.+ ..+.++|..+..- ........ .-.+++ .-+++.++.|+.+ ..+.+||..+.+-..
T Consensus 55 ~~~lyv~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~ 132 (306)
T 3ii7_A 55 DNVVYILGGSQLFPIKRMDCYNVVKDSW-YSKLGPPTPRDSLAAC-AAEGKIYTSGGSEVGNSALYLFECYDTRTESWHT 132 (306)
T ss_dssp TTEEEEECCBSSSBCCEEEEEETTTTEE-EEEECCSSCCBSCEEE-EETTEEEEECCBBTTBSCCCCEEEEETTTTEEEE
T ss_pred CCEEEEEeCCCCCCcceEEEEeCCCCeE-EECCCCCccccceeEE-EECCEEEEECCCCCCCcEeeeEEEEeCCCCceEe
Confidence 56777888755 5677888877632 22221111 111222 2267777777765 458899988775432
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec---------CCcEEEEECCCCceEEEEEeccCCc
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ---------SKYICIYSSREGILLKKFTITQNKS 198 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~---------dg~I~lwD~~~~~~~~~~~~~~~~~ 198 (703)
. .... .. .....++.+ +++.++.|+. -..+.+||+.+.+-...-..+..
T Consensus 133 ~-~~~p---~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~-- 190 (306)
T 3ii7_A 133 K-PSML---TQ--------------RCSHGMVEA--NGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEA-- 190 (306)
T ss_dssp E-CCCS---SC--------------CBSCEEEEE--TTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSC--
T ss_pred C-CCCc---CC--------------cceeEEEEE--CCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccch--
Confidence 2 1100 00 001122222 5666666653 34588999988754332111111
Q ss_pred cccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccceEEEEEcCCCCEEEEEeCC----
Q psy7108 199 LDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVRVFCVKFSPTGQAWVAATTE---- 272 (703)
Q Consensus 199 ~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~V~~l~~spdg~~l~s~s~D---- 272 (703)
.....+..-+++.+++++..+. .....+.+||..+.+ .+............+.+ +++.++.|+.+
T Consensus 191 ------r~~~~~~~~~~~i~v~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~ 261 (306)
T 3ii7_A 191 ------RKNHGLVFVKDKIFAVGGQNGL-GGLDNVEYYDIKLNEWKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGR 261 (306)
T ss_dssp ------CBSCEEEEETTEEEEECCEETT-EEBCCEEEEETTTTEEEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSB
T ss_pred ------hhcceEEEECCEEEEEeCCCCC-CCCceEEEeeCCCCcEEECCCCCCCccceeEEEE--CCEEEEEeCcCCCee
Confidence 1111122225666666554321 112357788877653 22222222222233333 56677777754
Q ss_pred -C-EEEEEcCCCc
Q psy7108 273 -G-VHIYSLDSGY 283 (703)
Q Consensus 273 -g-v~iwd~~~~~ 283 (703)
. +.+||..+.+
T Consensus 262 ~~~~~~yd~~~~~ 274 (306)
T 3ii7_A 262 LGHILEYNTETDK 274 (306)
T ss_dssp CCEEEEEETTTTE
T ss_pred eeeEEEEcCCCCe
Confidence 2 7788887654
No 326
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=94.15 E-value=0.61 Score=46.71 Aligned_cols=191 Identities=11% Similarity=0.089 Sum_probs=93.0
Q ss_pred CCCEEEEEeCCC-----cEEEEEcCCCceeEEEecC--CCcEEEEEEecCCCEEEEEECCC-----eEEEEEcCCCcEEE
Q psy7108 60 SSTGMVSASWDK-----TVKLWNAVETDTQHETIQL--LSDALCVAYKPDGTEIVVATLDG-----QLIMFDVESAAQVG 127 (703)
Q Consensus 60 dg~~L~sgs~Dg-----~V~iWd~~~~~~~~~~~~~--~~~V~~v~~spdg~~las~s~dg-----~I~vwd~~~~~~~~ 127 (703)
++.+++.|+.++ .+.+||..+..- ...... ...-.+++. -+++.++.|+.++ .+.+||+.+.+-..
T Consensus 61 ~~~lyv~GG~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~ 138 (302)
T 2xn4_A 61 AGLVFAVGGFNGSLRVRTVDSYDPVKDQW-TSVANMRDRRSTLGAAV-LNGLLYAVGGFDGSTGLSSVEAYNIKSNEWFH 138 (302)
T ss_dssp TTEEEEESCBCSSSBCCCEEEEETTTTEE-EEECCCSSCCBSCEEEE-ETTEEEEEEEECSSCEEEEEEEEETTTTEEEE
T ss_pred CCEEEEEeCcCCCccccceEEECCCCCce-eeCCCCCccccceEEEE-ECCEEEEEcCCCCCccCceEEEEeCCCCeEee
Confidence 567777777543 577888876632 222111 111112222 2677777777653 47788887765432
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-------CcEEEEECCCCceEEEEEeccCCccc
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-------KYICIYSSREGILLKKFTITQNKSLD 200 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-------g~I~lwD~~~~~~~~~~~~~~~~~~~ 200 (703)
. .... .. .....++.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.. ..
T Consensus 139 ~-~~~p---~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~ 196 (302)
T 2xn4_A 139 V-APMN---TR--------------RSSVGVGVV--GGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTR--RS 196 (302)
T ss_dssp E-CCCS---SC--------------CBSCEEEEE--TTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSC--CB
T ss_pred c-CCCC---Cc--------------ccCceEEEE--CCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccc--cc
Confidence 2 1100 00 001122222 56666666532 4588999988754433111111 11
Q ss_pred cccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCCC-----
Q psy7108 201 GINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTEG----- 273 (703)
Q Consensus 201 ~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg----- 273 (703)
+ .+ +..-+++.+++++.++ ......+.+||..+.+-. ............+. -+++.++.|+.++
T Consensus 197 ~-----~~-~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~ 267 (302)
T 2xn4_A 197 G-----AG-VGVLNNLLYAVGGHDG-PLVRKSVEVYDPTTNAWRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLA 267 (302)
T ss_dssp S-----CE-EEEETTEEEEECCBSS-SSBCCCEEEEETTTTEEEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCC
T ss_pred c-----cc-EEEECCEEEEECCCCC-CcccceEEEEeCCCCCEeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccc
Confidence 1 11 1223566666665443 111246788888765322 11111111122222 2566667776542
Q ss_pred -EEEEEcCCCc
Q psy7108 274 -VHIYSLDSGY 283 (703)
Q Consensus 274 -v~iwd~~~~~ 283 (703)
+.+||..+.+
T Consensus 268 ~v~~yd~~~~~ 278 (302)
T 2xn4_A 268 SVEYYNPTTDK 278 (302)
T ss_dssp CEEEEETTTTE
T ss_pred cEEEEcCCCCe
Confidence 6788877654
No 327
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=94.14 E-value=0.6 Score=46.66 Aligned_cols=192 Identities=7% Similarity=0.016 Sum_probs=94.1
Q ss_pred CCCEEEEEe-CC-----CcEEEEEcCCCceeEEEecCCC-cEEEEEEecCCCEEEEEECC-----CeEEEEEcCCCc---
Q psy7108 60 SSTGMVSAS-WD-----KTVKLWNAVETDTQHETIQLLS-DALCVAYKPDGTEIVVATLD-----GQLIMFDVESAA--- 124 (703)
Q Consensus 60 dg~~L~sgs-~D-----g~V~iWd~~~~~~~~~~~~~~~-~V~~v~~spdg~~las~s~d-----g~I~vwd~~~~~--- 124 (703)
++..++.|+ .+ ..+.++|..+..- ........ .....+...+++.++.|+.+ ..+.+||..+.+
T Consensus 14 ~~~i~~~GG~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~~~~~l~v~GG~~~~~~~~~~~~~d~~~~~~~~ 92 (301)
T 2vpj_A 14 NEVLLVVGGFGSQQSPIDVVEKYDPKTQEW-SFLPSITRKRRYVASVSLHDRIYVIGGYDGRSRLSSVECLDYTADEDGV 92 (301)
T ss_dssp CEEEEEECCEETTTEECCCEEEEETTTTEE-EECCCCSSCCBSCEEEEETTEEEEECCBCSSCBCCCEEEEETTCCTTCC
T ss_pred CCEEEEEeCccCCCcceeEEEEEcCCCCeE-EeCCCCChhhccccEEEECCEEEEEcCCCCCccCceEEEEECCCCCCCe
Confidence 456666666 33 3677888876631 11111111 11111222356777777765 358899987765
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCCcc
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNKSL 199 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~~~ 199 (703)
-... ... ... ......+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.. .
T Consensus 93 W~~~-~~~---p~~--------------r~~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r 150 (301)
T 2vpj_A 93 WYSV-APM---NVR--------------RGLAGATTL--GDMIYVSGGFDGSRRHTSMERYDPNIDQWSMLGDMQTA--R 150 (301)
T ss_dssp CEEE-CCC---SSC--------------CBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTTTEEEEEEECSSC--C
T ss_pred eEEC-CCC---CCC--------------ccceeEEEE--CCEEEEEcccCCCcccceEEEEcCCCCeEEECCCCCCC--c
Confidence 2221 100 000 011122222 56667776643 3689999988765443221111 1
Q ss_pred ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--ecCCccceEEEEEcCCCCEEEEEeCC-----
Q psy7108 200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--VLKPEVRVFCVKFSPTGQAWVAATTE----- 272 (703)
Q Consensus 200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~~~h~~~V~~l~~spdg~~l~s~s~D----- 272 (703)
.+ ..+..-+++.+++++.++ ......+..||..+.+-... ..........+.+ +++.++.|+.+
T Consensus 151 ~~------~~~~~~~~~iyv~GG~~~-~~~~~~~~~~d~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~ 221 (301)
T 2vpj_A 151 EG------AGLVVASGVIYCLGGYDG-LNILNSVEKYDPHTGHWTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHL 221 (301)
T ss_dssp BS------CEEEEETTEEEEECCBCS-SCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBC
T ss_pred cc------ceEEEECCEEEEECCCCC-CcccceEEEEeCCCCcEEeCCCCCcccccceEEEE--CCEEEEEeCCCCCccc
Confidence 11 112223667666665443 22224677888776532211 1111112222222 56666777653
Q ss_pred C-EEEEEcCCCc
Q psy7108 273 G-VHIYSLDSGY 283 (703)
Q Consensus 273 g-v~iwd~~~~~ 283 (703)
. +.+||..+.+
T Consensus 222 ~~v~~yd~~~~~ 233 (301)
T 2vpj_A 222 SSVEAYNIRTDS 233 (301)
T ss_dssp CCEEEEETTTTE
T ss_pred ceEEEEeCCCCc
Confidence 2 7889987654
No 328
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=93.87 E-value=0.0045 Score=61.12 Aligned_cols=54 Identities=22% Similarity=0.362 Sum_probs=40.5
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
..|+.+.++++.+..+..++.++|||+||+.++..+.+.| ++++..+..+|...
T Consensus 102 ~~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p---~~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 102 IEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYP---DLIKKVVLLAPAAT 155 (270)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCT---TTEEEEEEESCCTH
T ss_pred HHhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCc---hhhcEEEEeccccc
Confidence 4577889999988777779999999999988776655443 35666676666543
No 329
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=93.85 E-value=4.4 Score=41.64 Aligned_cols=71 Identities=13% Similarity=0.124 Sum_probs=42.9
Q ss_pred cCeEEEEEcCCCCCC-EEEEEeCCCcEEEEEcCCCceeEEE-------ecCCCcEEEEEEecC---CCEEEEEE-C----
Q psy7108 48 GPVSCIEFSPVLSST-GMVSASWDKTVKLWNAVETDTQHET-------IQLLSDALCVAYKPD---GTEIVVAT-L---- 111 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~-~L~sgs~Dg~V~iWd~~~~~~~~~~-------~~~~~~V~~v~~spd---g~~las~s-~---- 111 (703)
..-..++|.| +|+ ++++ ...|.|++++.. +.....+ .........++++|+ +..|.++. .
T Consensus 18 ~~P~~i~~~p--dG~~l~V~-e~~G~i~~~~~~-g~~~~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lYv~~~~~~~~ 93 (353)
T 2g8s_A 18 DHPWALAFLP--DNHGMLIT-LRGGELRHWQAG-KGLSAPLSGVPDVWAHGQGGLLDVVLAPDFAQSRRIWLSYSEVGDD 93 (353)
T ss_dssp SSEEEEEECS--TTCCEEEE-ETTTEEEEEETT-TEECCCCBSCCCCCCSTTCSEEEEEECTTHHHHCEEEEEEEEECSS
T ss_pred CCcEEEEEcC--CCCEEEEE-eCCceEEEEeCC-CceeeEecCCcccccCCCCCceeEEECCCCCCCCEEEEEEeCCCCC
Confidence 3467999999 998 5554 467889888743 3211111 112346789999996 55554442 2
Q ss_pred ---CCeEEEEEcCC
Q psy7108 112 ---DGQLIMFDVES 122 (703)
Q Consensus 112 ---dg~I~vwd~~~ 122 (703)
...|..++...
T Consensus 94 g~~~~~v~r~~~~~ 107 (353)
T 2g8s_A 94 GKAGTAVGYGRLSD 107 (353)
T ss_dssp SCEEEEEEEEEECT
T ss_pred CCceeEEEEEEECC
Confidence 23566666653
No 330
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=93.78 E-value=0.73 Score=46.22 Aligned_cols=191 Identities=6% Similarity=0.027 Sum_probs=93.3
Q ss_pred CCEEEEEeCC--CcEEEEEcCCCceeEEEecCCC-c-EEEEEEecCCCEEEEEECC----CeEEEEEcCCCcEEEEEecc
Q psy7108 61 STGMVSASWD--KTVKLWNAVETDTQHETIQLLS-D-ALCVAYKPDGTEIVVATLD----GQLIMFDVESAAQVGSVEAR 132 (703)
Q Consensus 61 g~~L~sgs~D--g~V~iWd~~~~~~~~~~~~~~~-~-V~~v~~spdg~~las~s~d----g~I~vwd~~~~~~~~~~~~~ 132 (703)
+.+++.|+.+ ..+.+||..+..- ..+..... . -.+++ .-+++.++.|+.+ ..+.+||..+.+-...-...
T Consensus 12 ~~l~~~GG~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~d~~~~~W~~~~~~p 89 (306)
T 3ii7_A 12 DYRIALFGGSQPQSCRYFNPKDYSW-TDIRCPFEKRRDAACV-FWDNVVYILGGSQLFPIKRMDCYNVVKDSWYSKLGPP 89 (306)
T ss_dssp CEEEEEECCSSTTSEEEEETTTTEE-EECCCCSCCCBSCEEE-EETTEEEEECCBSSSBCCEEEEEETTTTEEEEEECCS
T ss_pred ceEEEEeCCCCCceEEEecCCCCCE-ecCCCCCcccceeEEE-EECCEEEEEeCCCCCCcceEEEEeCCCCeEEECCCCC
Confidence 3455666543 5688888876631 11111111 1 11122 2366777777755 56889998877543221110
Q ss_pred ccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC------CcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108 133 RDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS------KYICIYSSREGILLKKFTITQNKSLDGINDFI 206 (703)
Q Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v 206 (703)
. . ......+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.. ...
T Consensus 90 ~----~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~----- 142 (306)
T 3ii7_A 90 T----P--------------RDSLAACAA--EGKIYTSGGSEVGNSALYLFECYDTRTESWHTKPSMLTQ--RCS----- 142 (306)
T ss_dssp S----C--------------CBSCEEEEE--TTEEEEECCBBTTBSCCCCEEEEETTTTEEEEECCCSSC--CBS-----
T ss_pred c----c--------------ccceeEEEE--CCEEEEECCCCCCCcEeeeEEEEeCCCCceEeCCCCcCC--cce-----
Confidence 0 0 001122222 56777777654 4589999988764332111111 111
Q ss_pred eeeeeccCCCEEEEEcccCCCCC---eeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCC------CEE
Q psy7108 207 NRRKMTEFGNVSLIETRETHEGG---NVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTE------GVH 275 (703)
Q Consensus 207 ~~~~~spdg~~l~~~~~~~~~~~---~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~D------gv~ 275 (703)
..+..-+++.+++++..+.... ...+.+||..+.+-. ............+.+ +++.++.|+.+ .+.
T Consensus 143 -~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~ 219 (306)
T 3ii7_A 143 -HGMVEANGLIYVCGGSLGNNVSGRVLNSCEVYDPATETWTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVE 219 (306)
T ss_dssp -CEEEEETTEEEEECCEESCTTTCEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEE
T ss_pred -eEEEEECCEEEEECCCCCCCCcccccceEEEeCCCCCeEEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEE
Confidence 1122236666666654432210 346778887765322 111111111222222 56666666542 277
Q ss_pred EEEcCCCc
Q psy7108 276 IYSLDSGY 283 (703)
Q Consensus 276 iwd~~~~~ 283 (703)
+||..+.+
T Consensus 220 ~yd~~~~~ 227 (306)
T 3ii7_A 220 YYDIKLNE 227 (306)
T ss_dssp EEETTTTE
T ss_pred EeeCCCCc
Confidence 88887653
No 331
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=93.75 E-value=0.0059 Score=59.90 Aligned_cols=52 Identities=19% Similarity=0.141 Sum_probs=38.3
Q ss_pred CCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 529 YDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 529 ~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
.|+.++++|+..... ..+++++|||+||..++..+.+.|+ ++..+..+|...
T Consensus 105 ~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 157 (249)
T 2i3d_A 105 SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE----IEGFMSIAPQPN 157 (249)
T ss_dssp HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT----EEEEEEESCCTT
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC----ccEEEEEcCchh
Confidence 677888999986643 3489999999999887776665544 666677776543
No 332
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=93.64 E-value=6.3 Score=42.05 Aligned_cols=117 Identities=11% Similarity=0.134 Sum_probs=63.7
Q ss_pred CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCE
Q psy7108 91 LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSC 167 (703)
Q Consensus 91 ~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~ 167 (703)
-....+++|.|+|+++++-...+.|++++..+++......-...+. .....+....++|+|| +..
T Consensus 26 l~~P~~~a~~pdG~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~------------~~~g~~Gllgia~~Pdf~~~g~ 93 (454)
T 1cru_A 26 LNKPHALLWGPDNQIWLTERATGKILRVNPESGSVKTVFQVPEIVN------------DADGQNGLLGFAFHPDFKNNPY 93 (454)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEEEEECTTCCC------------CTTSSCSEEEEEECTTTTTSCE
T ss_pred CCCceEEEEcCCCcEEEEEcCCCEEEEEECCCCcEeEEecCCcccc------------ccCCCCceeEEEECCCcCcCCE
Confidence 4467899999999876664333478888876555432221111000 0011346789999996 555
Q ss_pred EEEEec-------------CCcEEEEECCCC--ce---EEEEEeccCCccccccccceeeeeccCCCEEEEEcc
Q psy7108 168 ILAAGQ-------------SKYICIYSSREG--IL---LKKFTITQNKSLDGINDFINRRKMTEFGNVSLIETR 223 (703)
Q Consensus 168 l~s~s~-------------dg~I~lwD~~~~--~~---~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~ 223 (703)
|.++.. ...|.-++...+ +. ...+..... ...| ....++|.|||..+++.+.
T Consensus 94 lYv~~s~~~~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~--~~~H--~~~~l~f~pDG~Lyv~~Gd 163 (454)
T 1cru_A 94 IYISGTFKNPKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLPS--SKDH--QSGRLVIGPDQKIYYTIGD 163 (454)
T ss_dssp EEEEEEEECTTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEECC--CSSC--CEEEEEECTTSCEEEEECC
T ss_pred EEEEEeccccCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCCC--CCCC--CCCeEeECCCCeEEEEECC
Confidence 554432 234666665432 11 111211111 0112 4678999999987766554
No 333
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A {Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Probab=93.63 E-value=0.032 Score=60.02 Aligned_cols=56 Identities=25% Similarity=0.219 Sum_probs=46.9
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-++.+.++.+++..+..++++||||||+.+++.++..+|+...+|+.+++++|...
T Consensus 112 ~dla~~L~~ll~~lg~~kV~LVGHSmGG~IAl~~A~~~Pe~~~~V~~LVlIapp~~ 167 (484)
T 2zyr_A 112 SRLDRVIDEALAESGADKVDLVGHSMGTFFLVRYVNSSPERAAKVAHLILLDGVWG 167 (484)
T ss_dssp HHHHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHTCHHHHHTEEEEEEESCCCS
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHCccchhhhCEEEEECCccc
Confidence 35567788888888888999999999999999999988865578899999997653
No 334
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=93.62 E-value=0.025 Score=58.42 Aligned_cols=54 Identities=22% Similarity=0.142 Sum_probs=43.6
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
-++.+.++.++...+.+++++||||||++++..++..+. ..++|+.+|.++|..
T Consensus 112 ~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~-~p~~V~~lVlla~p~ 165 (342)
T 2x5x_A 112 AIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYN-NWTSVRKFINLAGGI 165 (342)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHT-CGGGEEEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcC-chhhhcEEEEECCCc
Confidence 456678888888888889999999999999988887641 135788999998764
No 335
>3iii_A COCE/NOND family hydrolase; structural genomics, center for structural genomi infectious diseases, csgid; HET: MSE PLM; 1.95A {Staphylococcus aureus subsp} PDB: 3ib3_A*
Probab=93.58 E-value=0.01 Score=65.72 Aligned_cols=53 Identities=21% Similarity=0.239 Sum_probs=39.1
Q ss_pred cCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|..++++|+.+.+. ..+++++|||+||+.+++++++.| .+++..+..+|..
T Consensus 143 ~~D~~~~i~~l~~~~~~~~~igl~G~S~GG~~al~~a~~~p---~~l~aiv~~~~~~ 196 (560)
T 3iii_A 143 AEDYYEVIEWAANQSWSNGNIGTNGVSYLAVTQWWVASLNP---PHLKAMIPWEGLN 196 (560)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEETHHHHHHHHHHTTCC---TTEEEEEEESCCC
T ss_pred HHHHHHHHHHHHhCCCCCCcEEEEccCHHHHHHHHHHhcCC---CceEEEEecCCcc
Confidence 5678889999997753 268999999999998888777654 2455555555543
No 336
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=93.55 E-value=2.2 Score=44.75 Aligned_cols=155 Identities=12% Similarity=0.097 Sum_probs=94.8
Q ss_pred EeeecccCCceEEecCCceee-ccC-CCccccccccCC----CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCc--
Q psy7108 11 ETRETHEGGNVVLKLPGVKKG-DMA-ARVLKPEVLSGH----EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETD-- 82 (703)
Q Consensus 11 ~~~~~~~~~~~~i~~~~v~~~-d~t-g~~~~~~~l~gH----~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~-- 82 (703)
..+..+++...++..-+.--| +.. +..- +.+.-- -+.|..+..+| +|++||..+. .+|.|-.+..+.
T Consensus 25 ~~~~~~n~t~i~~a~~n~iR~~~i~~~~~Y--k~L~~~~~i~f~~i~qlvlSp--sG~lLAl~g~-~~V~Vv~LP~~~~~ 99 (452)
T 3pbp_A 25 YIFSSQNGTRIVFIQDNIIRWYNVLTDSLY--HSLNFSRHLVLDDTFHVISST--SGDLLCLFND-NEIFVMEVPWGYSN 99 (452)
T ss_dssp EEEEETTTTEEEEEETTEEEEEETTTCSSC--EEEECTTTCCCCTTCEEEECT--TSSEEEEECS-SEEEEEECCTTCSC
T ss_pred EEEEEcCCCEEEEEECCEEEEEECCCCCcc--eEEecCcccccCceeEEEECC--CCCEEEEecC-CeEEEEEecCcccc
Confidence 334556777776666553333 222 2222 444332 23678899999 9999999865 578888876321
Q ss_pred ----------eeEEEe-c-----CCCcEEEEEEecC---CCEEEEEECCCeEEEEEcCCCcEE-EEEeccccCCCCCCCC
Q psy7108 83 ----------TQHETI-Q-----LLSDALCVAYKPD---GTEIVVATLDGQLIMFDVESAAQV-GSVEARRDLDSGRLDT 142 (703)
Q Consensus 83 ----------~~~~~~-~-----~~~~V~~v~~spd---g~~las~s~dg~I~vwd~~~~~~~-~~~~~~~~~~~~~~~~ 142 (703)
++.... + ...+|..+.|+|- +..|++-..|+.|++||+...... ..+.....
T Consensus 100 ~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~s~~~P~~L~k~~~-------- 171 (452)
T 3pbp_A 100 VEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILNSQEKPIVLNKPNN-------- 171 (452)
T ss_dssp CCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTCTTSCCEEESCCCS--------
T ss_pred CcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEEEecCCEEEEEEcccCCCCCcchhcccc--------
Confidence 111111 1 2567999999995 468999999999999999863211 13321110
Q ss_pred ccchhhcccCCccEEEEEEcCCCCEEEEEe--cCCcEEEEE
Q psy7108 143 DLVTREQSLKAKAVSTVCYSADGSCILAAG--QSKYICIYS 181 (703)
Q Consensus 143 ~~~~~~~~~~~~~V~~i~~spdg~~l~s~s--~dg~I~lwD 181 (703)
..........|.+++|.+++-.|...+ ..|.|+-.-
T Consensus 172 ---~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~~GDIYAlc 209 (452)
T 3pbp_A 172 ---SFGLDARVNDITDLEFSKDGLTLYCLNTTEGGDIFAFY 209 (452)
T ss_dssp ---EEESCSSCCCEEEEEECTTSSCEEEEECTTSCEEEEES
T ss_pred ---ccCCCcccceEEEEEEcCCCcEEEEEecCCCCCEEEEC
Confidence 001112225789999999887676644 677776543
No 337
>3trd_A Alpha/beta hydrolase; cellular processes; 1.50A {Coxiella burnetii}
Probab=93.32 E-value=0.03 Score=52.76 Aligned_cols=51 Identities=16% Similarity=0.166 Sum_probs=42.5
Q ss_pred ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.-|+.+.++++....+..++.++|||+|+.+++.++ .+| .++.+++++|..
T Consensus 88 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a-~~~----~v~~~v~~~~~~ 138 (208)
T 3trd_A 88 VEDLKAVLRWVEHHWSQDDIWLAGFSFGAYISAKVA-YDQ----KVAQLISVAPPV 138 (208)
T ss_dssp HHHHHHHHHHHHHHCTTCEEEEEEETHHHHHHHHHH-HHS----CCSEEEEESCCT
T ss_pred HHHHHHHHHHHHHhCCCCeEEEEEeCHHHHHHHHHh-ccC----CccEEEEecccc
Confidence 357788999999987778999999999999998888 545 677888888765
No 338
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=93.31 E-value=0.051 Score=49.49 Aligned_cols=51 Identities=16% Similarity=0.150 Sum_probs=41.5
Q ss_pred chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
++.+.++++.......++..+|||+|+.+++.++..+| ++.+++++|....
T Consensus 59 ~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~v~~~~~~~~ 109 (176)
T 2qjw_A 59 RLQRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP-----TRALFLMVPPTKM 109 (176)
T ss_dssp HHHHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC-----CSEEEEESCCSCB
T ss_pred HHHHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC-----hhheEEECCcCCc
Confidence 35567777777665678999999999999999998877 7888899887654
No 339
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=93.26 E-value=0.0099 Score=64.07 Aligned_cols=46 Identities=28% Similarity=0.293 Sum_probs=30.4
Q ss_pred HHHhHccCCCcc-eEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 535 IDYILNQTGHNS-LITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 535 ~~~i~~~~~~~~-~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
+..++..-+.++ +.++|||+||+.++....+.|+ +++.++..+|..
T Consensus 189 l~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~---~v~~lVli~~~~ 235 (444)
T 2vat_A 189 HRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPE---YVRKIVPIATSC 235 (444)
T ss_dssp HHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTT---TBCCEEEESCCS
T ss_pred HHHHHHhcCCccceEEEEECHHHHHHHHHHHhChH---hhheEEEEeccc
Confidence 333444334567 8999999999988776666554 566666665543
No 340
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=93.16 E-value=0.008 Score=60.31 Aligned_cols=51 Identities=16% Similarity=0.172 Sum_probs=35.4
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.++++++... .+++.++|||+||..++....+.| ++++.++..+|+.
T Consensus 105 ~~d~~~~~~~l~~~--~~~v~lvG~S~GG~ia~~~a~~~p---~~v~~lvl~~~~~ 155 (281)
T 4fbl_A 105 TADIVAAMRWLEER--CDVLFMTGLSMGGALTVWAAGQFP---ERFAGIMPINAAL 155 (281)
T ss_dssp HHHHHHHHHHHHHH--CSEEEEEEETHHHHHHHHHHHHST---TTCSEEEEESCCS
T ss_pred HHHHHHHHHHHHhC--CCeEEEEEECcchHHHHHHHHhCc---hhhhhhhcccchh
Confidence 34677778887654 358999999999987776655444 3566666666643
No 341
>2b9v_A Alpha-amino acid ester hydrolase; catalytic triad, alpha/beta-hydrolase; 2.00A {Acetobacter pasteurianus} SCOP: b.18.1.13 c.69.1.21 PDB: 2b4k_A 1nx9_A* 1ryy_A
Probab=93.10 E-value=0.026 Score=63.94 Aligned_cols=53 Identities=13% Similarity=0.107 Sum_probs=38.9
Q ss_pred cCCchhhHHHhHcc-CC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQ-TG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~-~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.++++|+... +. ..+++++|||+||+++|+++++.+ .+++..+..+|+.
T Consensus 138 ~~D~~~~i~~l~~~~~~~d~rvgl~G~SyGG~~al~~a~~~~---~~lka~v~~~~~~ 192 (652)
T 2b9v_A 138 TTDAWDTVDWLVHNVPESNGRVGMTGSSYEGFTVVMALLDPH---PALKVAAPESPMV 192 (652)
T ss_dssp HHHHHHHHHHHHHSCTTEEEEEEEEEEEHHHHHHHHHHTSCC---TTEEEEEEEEECC
T ss_pred hhHHHHHHHHHHhcCCCCCCCEEEEecCHHHHHHHHHHhcCC---CceEEEEeccccc
Confidence 46888899999977 42 259999999999998888776543 2455555555543
No 342
>1mpx_A Alpha-amino acid ester hydrolase; alpha/beta hydrolase, jellyroll, selenomethionine; 1.90A {Xanthomonas citri} SCOP: b.18.1.13 c.69.1.21
Probab=93.09 E-value=0.011 Score=66.66 Aligned_cols=54 Identities=17% Similarity=0.160 Sum_probs=39.4
Q ss_pred cCCchhhHHHhHcc-CC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQ-TG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 528 ~~d~~~~~~~i~~~-~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
..|+.++++|+... +. ..+++++|||+||++++.++...+ .+++..+..+|+..
T Consensus 125 ~~D~~~~i~~l~~~~~~~~~rv~l~G~S~GG~~al~~a~~~~---~~l~a~v~~~~~~d 180 (615)
T 1mpx_A 125 ATDAWDTIDWLVKNVSESNGKVGMIGSSYEGFTVVMALTNPH---PALKVAVPESPMID 180 (615)
T ss_dssp HHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTSCC---TTEEEEEEESCCCC
T ss_pred HHHHHHHHHHHHhcCCCCCCeEEEEecCHHHHHHHHHhhcCC---CceEEEEecCCccc
Confidence 46788899999876 32 259999999999998877665543 34666666666544
No 343
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG, P structure initiative; 1.80A {Listeria innocua}
Probab=93.03 E-value=0.024 Score=55.90 Aligned_cols=54 Identities=13% Similarity=0.072 Sum_probs=43.0
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHH--HHHHHheecccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQ--TKVRLNVLWAQS 664 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~--~~i~~~~~l~p~ 664 (703)
-|+.+.++.+....+..++++||||+|++++..++..+|+-. .+|+.++.+++.
T Consensus 78 ~~l~~~i~~l~~~~~~~~~~lvGHS~Gg~ia~~~~~~~~~~~~~~~v~~lv~i~~p 133 (254)
T 3ds8_A 78 KWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRKLVAIGSP 133 (254)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEETHHHHHHHHHHHHSTTCTTSCEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHccCCccccceeeEEEEcCC
Confidence 346677788888888889999999999999999888877521 267888888863
No 344
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=92.94 E-value=0.033 Score=54.41 Aligned_cols=52 Identities=19% Similarity=0.303 Sum_probs=41.2
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
-|+-+.++++.+..+..+++++|||+|+.+++.++..+|+ .++.+++++|..
T Consensus 84 ~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 135 (251)
T 2wtm_A 84 TNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMERD---IIKALIPLSPAA 135 (251)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTTT---TEEEEEEESCCT
T ss_pred HHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCcc---cceEEEEECcHH
Confidence 4677788988665444689999999999999988887775 477788888864
No 345
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=92.90 E-value=0.064 Score=49.93 Aligned_cols=51 Identities=16% Similarity=0.141 Sum_probs=41.3
Q ss_pred cchHHHHHHHHhhCCC-CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~-~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
+++...++.++...+. .+++++|||+|+.+++.++..+| ++.+++++|...
T Consensus 50 ~~~~~~~~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p-----v~~lvl~~~~~~ 101 (194)
T 2qs9_A 50 ARESIWLPFMETELHCDEKTIIIGHSSGAIAAMRYAETHR-----VYAIVLVSAYTS 101 (194)
T ss_dssp CCHHHHHHHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC-----CSEEEEESCCSS
T ss_pred ccHHHHHHHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC-----CCEEEEEcCCcc
Confidence 3555667777777776 78999999999999999888877 788888888653
No 346
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=92.87 E-value=3.1 Score=42.81 Aligned_cols=115 Identities=12% Similarity=0.133 Sum_probs=60.2
Q ss_pred CcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---CCEE
Q psy7108 92 SDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD---GSCI 168 (703)
Q Consensus 92 ~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd---g~~l 168 (703)
.....++|.|+|+.++++...|.|++++.+ +.....+..... ......+....++++|+ +..|
T Consensus 18 ~~P~~i~~~pdG~~l~V~e~~G~i~~~~~~-g~~~~~~~~~~~-------------v~~~g~~g~~gia~~pdf~~~g~l 83 (353)
T 2g8s_A 18 DHPWALAFLPDNHGMLITLRGGELRHWQAG-KGLSAPLSGVPD-------------VWAHGQGGLLDVVLAPDFAQSRRI 83 (353)
T ss_dssp SSEEEEEECSTTCCEEEEETTTEEEEEETT-TEECCCCBSCCC-------------CCCSTTCSEEEEEECTTHHHHCEE
T ss_pred CCcEEEEEcCCCCEEEEEeCCceEEEEeCC-CceeeEecCCcc-------------cccCCCCCceeEEECCCCCCCCEE
Confidence 456899999999834455678999999853 332111111000 00011235789999996 4555
Q ss_pred EEEe-c-------CCcEEEEECCCC--ce--EEE-EEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108 169 LAAG-Q-------SKYICIYSSREG--IL--LKK-FTITQNKSLDGINDFINRRKMTEFGNVSLIET 222 (703)
Q Consensus 169 ~s~s-~-------dg~I~lwD~~~~--~~--~~~-~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 222 (703)
.++. . ...|..+++... +. ... +..........| .-..++|.|||..+++.+
T Consensus 84 Yv~~~~~~~~g~~~~~v~r~~~~~~~~~~~~~~~i~~~~p~~~~~~h--~~~~l~~~pdG~Lyv~~G 148 (353)
T 2g8s_A 84 WLSYSEVGDDGKAGTAVGYGRLSDDLSKVTDFRTVFRQMPKLSTGNH--FGGRLVFDGKGYLFIALG 148 (353)
T ss_dssp EEEEEEECSSSCEEEEEEEEEECTTSSBEEEEEEEEECSSCCBSSSC--CCCCEEECSSSEEEEEEC
T ss_pred EEEEeCCCCCCCceeEEEEEEECCCCCCCCceEEEEEECCCCCCCcc--cCccEEECCCCcEEEEEC
Confidence 5442 2 235666766543 11 111 111110000111 346799999996555543
No 347
>3hju_A Monoglyceride lipase; alpha/beta hydrolase, hydrolase, serine esterase; 2.20A {Homo sapiens}
Probab=92.81 E-value=0.014 Score=59.83 Aligned_cols=53 Identities=21% Similarity=0.282 Sum_probs=39.2
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.+.++++....+..++.++|||+||+.++..+.+.| ++++.++..+|..
T Consensus 115 ~~d~~~~l~~l~~~~~~~~v~l~G~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 167 (342)
T 3hju_A 115 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP---GHFAGMVLISPLV 167 (342)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHST---TTCSEEEEESCCC
T ss_pred HHHHHHHHHHHHHhCCCCcEEEEEeChHHHHHHHHHHhCc---cccceEEEECccc
Confidence 4577888899887766679999999999988777665444 3566666666653
No 348
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=92.77 E-value=0.014 Score=54.83 Aligned_cols=48 Identities=21% Similarity=0.215 Sum_probs=32.6
Q ss_pred hhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 532 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 532 ~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.+.+..+++..+.+++.++|||+||..++..+.+.| ++++..+..+|.
T Consensus 87 ~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~---~~~~~~v~~~~~ 134 (207)
T 3bdi_A 87 AEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYP---DIVDGIIAVAPA 134 (207)
T ss_dssp HHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCC
T ss_pred HHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCc---hhheEEEEeCCc
Confidence 344455555555679999999999987776655443 356666666664
No 349
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=92.72 E-value=9.8 Score=38.88 Aligned_cols=117 Identities=11% Similarity=-0.029 Sum_probs=65.9
Q ss_pred ecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCC---
Q psy7108 88 IQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSAD--- 164 (703)
Q Consensus 88 ~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spd--- 164 (703)
...-.....++|.|||..+++--..|.|++++..+++... +..-..+ .....+....++++|+
T Consensus 28 a~gL~~P~~ia~~pdG~llVter~~G~I~~v~~~~g~~~~-v~~~~~v-------------~~~g~~GllGia~~Pdf~~ 93 (347)
T 3das_A 28 ATGLNSPWGLAPLPGGDLLVSSRDEATITRVDAKTGRKTE-LGEVPGV-------------SPSGEGGLLGIALSPDYAS 93 (347)
T ss_dssp ECCCSSEEEEEECTTSCEEEEETTTCEEEEECTTTCCEEE-EEECTTC-------------CCBTTBSEEEEEECTTHHH
T ss_pred ecCCCCceEEEEcCCCcEEEEEecCCEEEEEECCCCcEee-ecccCce-------------eecCCCCceeeEecccccc
Confidence 3345567899999999976665448999999876665422 2111000 0111336789999996
Q ss_pred CCEEEEE---ecCCcEEEEECCCCc--------eEEEEEeccCCccccccccceeeeeccCCCEEEEEc
Q psy7108 165 GSCILAA---GQSKYICIYSSREGI--------LLKKFTITQNKSLDGINDFINRRKMTEFGNVSLIET 222 (703)
Q Consensus 165 g~~l~s~---s~dg~I~lwD~~~~~--------~~~~~~~~~~~~~~~~~~~v~~~~~spdg~~l~~~~ 222 (703)
+..|.+. ..++.|.-|.+..+. ....+..-.. -..| .-..++|.|||..+++.+
T Consensus 94 ~g~lYv~yt~~~~~~v~R~~~~~~~~~~~~~~~~~~i~~~~p~--~~~H--~g~~l~fgpDG~Lyvt~G 158 (347)
T 3das_A 94 DHMVYAYFTSASDNRIVRMLYDEKKPSGEQLGAPDTVFRGIPK--GVIH--NGGRIAFGPDKMLYAGTG 158 (347)
T ss_dssp HCEEEEEEECSSSEEEEEEEBCTTSCTTCCBCCCEEEEEEECC--CSSC--CCCCEEECTTSCEEEECB
T ss_pred CCEEEEEEecCCCCEEEEEEeCCCCcccccCCCcEEEEEcCCC--CCCc--cCccccCCCCCCEEEEEC
Confidence 3444442 234556666665421 1112221111 1112 346799999998666544
No 350
>3lp5_A Putative cell surface hydrolase; structural genom PSI2, MCSG, protein structure initiative, midwest center FO structural genomics; 2.00A {Lactobacillus plantarum}
Probab=92.66 E-value=0.041 Score=54.13 Aligned_cols=54 Identities=13% Similarity=0.027 Sum_probs=42.5
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchH--HHHHHHheecccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEY--QTKVRLNVLWAQS 664 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~--~~~i~~~~~l~p~ 664 (703)
-++.+.++++.+..+..++++||||+|+.+...++..++.- ..+|+.+|.+++.
T Consensus 82 ~~l~~~~~~l~~~~~~~~~~lvGHSmGg~~a~~~~~~~~~~~~~~~v~~lv~l~~p 137 (250)
T 3lp5_A 82 VWLNTAFKALVKTYHFNHFYALGHSNGGLIWTLFLERYLKESPKVHIDRLMTIASP 137 (250)
T ss_dssp HHHHHHHHHHHTTSCCSEEEEEEETHHHHHHHHHHHHTGGGSTTCEEEEEEEESCC
T ss_pred HHHHHHHHHHHHHcCCCCeEEEEECHhHHHHHHHHHHccccccchhhCEEEEECCC
Confidence 34678899988888989999999999999998887765321 2367888888843
No 351
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=92.65 E-value=0.018 Score=57.48 Aligned_cols=40 Identities=25% Similarity=0.245 Sum_probs=32.5
Q ss_pred cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCc
Q psy7108 528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRP 567 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~ 567 (703)
..|+.++++|+....+ ..++.++|||+||+.++....+.|
T Consensus 82 ~~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~ 123 (290)
T 3ksr_A 82 LDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP 123 (290)
T ss_dssp HHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC
T ss_pred HHHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC
Confidence 4688889999987753 358999999999998887776655
No 352
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.64 E-value=1.5 Score=44.02 Aligned_cols=179 Identities=10% Similarity=0.064 Sum_probs=84.4
Q ss_pred CCCEEEEEeC-----C--C----cEEEEEcCCCceeEEEecCCCcE--EEEEEecCCCEEEEEECC--------CeEEEE
Q psy7108 60 SSTGMVSASW-----D--K----TVKLWNAVETDTQHETIQLLSDA--LCVAYKPDGTEIVVATLD--------GQLIMF 118 (703)
Q Consensus 60 dg~~L~sgs~-----D--g----~V~iWd~~~~~~~~~~~~~~~~V--~~v~~spdg~~las~s~d--------g~I~vw 118 (703)
++..++.|+. . . .+.+||..+..- ........+- .+++. -+++.++.|+.+ ..+.+|
T Consensus 45 ~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~lyv~GG~~~~~~~~~~~~~~~~ 122 (315)
T 4asc_A 45 ENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEW-LGMPPLPSPRCLFGLGE-ALNSIYVVGGREIKDGERCLDSVMCY 122 (315)
T ss_dssp TCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEE-EECCCBSSCEESCEEEE-ETTEEEEECCEESSTTCCBCCCEEEE
T ss_pred CCEEEEEcCcccCCCCCccccccceEEecCCCCeE-EECCCCCcchhceeEEE-ECCEEEEEeCCcCCCCCcccceEEEE
Confidence 6788888873 1 1 266778766531 1211111111 11222 256666777642 358889
Q ss_pred EcCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec-C-----CcEEEEECCCCceEEEEE
Q psy7108 119 DVESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ-S-----KYICIYSSREGILLKKFT 192 (703)
Q Consensus 119 d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~-d-----g~I~lwD~~~~~~~~~~~ 192 (703)
|..+.+-... . ..... .....++. -+++.++.|+. + ..+.+||+.+.+-...-.
T Consensus 123 d~~~~~W~~~-~---~~p~~--------------r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~ 182 (315)
T 4asc_A 123 DRLSFKWGES-D---PLPYV--------------VYGHTVLS--HMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAP 182 (315)
T ss_dssp ETTTTEEEEC-C---CCSSC--------------CBSCEEEE--ETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCC
T ss_pred CCCCCcEeEC-C---CCCCc--------------ccceeEEE--ECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCC
Confidence 9887643211 1 00000 00112222 35666677765 2 468999998875432211
Q ss_pred eccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcccee--ecCCccceEEEEEcCCCCEEEEEe
Q psy7108 193 ITQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAAR--VLKPEVRVFCVKFSPTGQAWVAAT 270 (703)
Q Consensus 193 ~~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~--~~~h~~~V~~l~~spdg~~l~s~s 270 (703)
.+.. .....+..-+++.+++++..+ .+....+.+||..+.+-... ..........+.+ +++.++.|+
T Consensus 183 ~p~~--------r~~~~~~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~l~v~GG 251 (315)
T 4asc_A 183 MQTA--------RSLFGATVHDGRIIVAAGVTD-TGLTSSAEVYSITDNKWAPFEAFPQERSSLSLVSL--VGTLYAIGG 251 (315)
T ss_dssp CSSC--------CBSCEEEEETTEEEEEEEECS-SSEEEEEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEE
T ss_pred CCCc--------hhceEEEEECCEEEEEeccCC-CCccceEEEEECCCCeEEECCCCCCcccceeEEEE--CCEEEEECC
Confidence 1111 111112223667777766543 22234678888876532221 1111122222222 556667766
Q ss_pred C
Q psy7108 271 T 271 (703)
Q Consensus 271 ~ 271 (703)
.
T Consensus 252 ~ 252 (315)
T 4asc_A 252 F 252 (315)
T ss_dssp E
T ss_pred c
Confidence 5
No 353
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold, hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A {Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Probab=92.61 E-value=0.017 Score=58.50 Aligned_cols=60 Identities=17% Similarity=0.049 Sum_probs=41.5
Q ss_pred cccCCchhhHHHhHc---cCCCcceEEEEEecCceeeeeccCCCch-hh---hhHHHhhhhhhhhhc
Q psy7108 526 LGLYDTTATIDYILN---QTGHNSLITLGHSLGTTNVLIAGSLRPE-YQ---TKVRLNVLWAQSAFL 585 (703)
Q Consensus 526 ~g~~d~~~~~~~i~~---~~~~~~~~~~g~S~G~~~~~~~~~~~~~-~~---~~~~~~~~~~p~~~~ 585 (703)
..+.|+.++++|+.. .-+.++++++|||+||+.++.+..+... .. .+++..++.+|...+
T Consensus 130 ~~~~d~~~~~~~l~~~~~~~~~~~i~l~G~S~GG~la~~~a~~~~~~~~p~~~~v~~~v~~~~~~~~ 196 (303)
T 4e15_A 130 QLMTQFTHFLNWIFDYTEMTKVSSLTFAGHXAGAHLLAQILMRPNVITAQRSKMVWALIFLCGVYDL 196 (303)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCEEEEEETHHHHHHGGGGGCTTTSCHHHHHTEEEEEEESCCCCC
T ss_pred HHHHHHHHHHHHHHHHhhhcCCCeEEEEeecHHHHHHHHHHhccccccCcccccccEEEEEeeeecc
Confidence 345678889999976 3346799999999999887776654331 11 367777777765433
No 354
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=92.51 E-value=9.8 Score=38.36 Aligned_cols=193 Identities=11% Similarity=0.189 Sum_probs=98.1
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec----CCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ----LLSDALCVAYKPDGTEIVVATLDGQLIMFDVES 122 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~----~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~ 122 (703)
...+.++.++| +..++ ++.++.|.. ..++....+... +.+.+..+.+.+++..++++ .++.|.. ..+.
T Consensus 79 ~~~~~~i~~~~---~~~~~-~g~~g~i~~--S~DgG~tW~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~~g~v~~-S~Dg 150 (327)
T 2xbg_A 79 DYRFNSVSFQG---NEGWI-VGEPPIMLH--TTDGGQSWSQIPLDPKLPGSPRLIKALGNGSAEMIT-NVGAIYR-TKDS 150 (327)
T ss_dssp CCEEEEEEEET---TEEEE-EEETTEEEE--ESSTTSSCEECCCCTTCSSCEEEEEEEETTEEEEEE-TTCCEEE-ESST
T ss_pred CccEEEEEecC---CeEEE-EECCCeEEE--ECCCCCCceECccccCCCCCeEEEEEECCCCEEEEe-CCccEEE-EcCC
Confidence 45789999976 33444 455564433 333322222221 33567888887777666554 4554422 1223
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
|+.-...... ....+..+++.|++.+++++...+..+-.|- .+..-..+... .
T Consensus 151 G~tW~~~~~~-------------------~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~-gG~tW~~~~~~-------~ 203 (327)
T 2xbg_A 151 GKNWQALVQE-------------------AIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP-GQTAWEPHNRT-------T 203 (327)
T ss_dssp TSSEEEEECS-------------------CCCCEEEEEECTTSCEEEEETTSSEEEEECT-TCSSCEEEECC-------S
T ss_pred CCCCEEeecC-------------------CCcceEEEEEcCCCcEEEEECCCcEEEEeCC-CCCceeECCCC-------C
Confidence 3322222211 1226888999999887776654333333442 12221222111 1
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeec----CCccceEEEEEcCCCCEEEEEeCCC-EEEE
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVL----KPEVRVFCVKFSPTGQAWVAATTEG-VHIY 277 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~----~h~~~V~~l~~spdg~~l~s~s~Dg-v~iw 277 (703)
...+..+.++++++.++++.. + .+.+.+...++.-.... .....+.++++.+++..++++. ++ + .+
T Consensus 204 ~~~~~~~~~~~~g~~~~~~~~-G------~~~~s~~D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~ 274 (327)
T 2xbg_A 204 SRRLHNMGFTPDGRLWMIVNG-G------KIAFSDPDNSENWGELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LC 274 (327)
T ss_dssp SSCEEEEEECTTSCEEEEETT-T------EEEEEETTEEEEECCCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EE
T ss_pred CCccceeEECCCCCEEEEeCC-c------eEEEecCCCCCeeEeccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EE
Confidence 235677888898887655432 2 34443111121111111 1223588899998887766655 55 5 45
Q ss_pred EcCCCc
Q psy7108 278 SLDSGY 283 (703)
Q Consensus 278 d~~~~~ 283 (703)
..+.|+
T Consensus 275 S~DgG~ 280 (327)
T 2xbg_A 275 SQDGGQ 280 (327)
T ss_dssp ESSTTS
T ss_pred eCCCCc
Confidence 555443
No 355
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=92.41 E-value=2.6 Score=42.36 Aligned_cols=152 Identities=13% Similarity=0.084 Sum_probs=73.3
Q ss_pred CCCEEEEEeC----CC-------cEEEEEcCCCceeEEEecCCC--cEEEEEEecCCCEEEEEECC-------CeEEEEE
Q psy7108 60 SSTGMVSASW----DK-------TVKLWNAVETDTQHETIQLLS--DALCVAYKPDGTEIVVATLD-------GQLIMFD 119 (703)
Q Consensus 60 dg~~L~sgs~----Dg-------~V~iWd~~~~~~~~~~~~~~~--~V~~v~~spdg~~las~s~d-------g~I~vwd 119 (703)
++..++.|+. ++ .+.++|..+..- ........ .-.+++. -+++.++.|+.+ ..+.+||
T Consensus 56 ~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~-~~~~iyv~GG~~~~~~~~~~~~~~yd 133 (318)
T 2woz_A 56 QNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEW-VGLPPLPSARCLFGLGE-VDDKIYVVAGKDLQTEASLDSVLCYD 133 (318)
T ss_dssp SSCEEEEESSCC-------CCCBEEEEEETTTTEE-EECSCBSSCBCSCEEEE-ETTEEEEEEEEBTTTCCEEEEEEEEE
T ss_pred CCEEEEECCcccCccccCCCccccEEEEeCCCCcE-EECCCCCccccccceEE-ECCEEEEEcCccCCCCcccceEEEEe
Confidence 6788888873 12 166778766531 11111111 1112222 256777777754 2478888
Q ss_pred cCCCcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEec------CCcEEEEECCCCceEEEEEe
Q psy7108 120 VESAAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQ------SKYICIYSSREGILLKKFTI 193 (703)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~------dg~I~lwD~~~~~~~~~~~~ 193 (703)
..+.+-...-.... ... ...++. .+++.++.|+. -..+.+||+.+.+-...-..
T Consensus 134 ~~~~~W~~~~~~p~--------------~r~----~~~~~~--~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~ 193 (318)
T 2woz_A 134 PVAAKWSEVKNLPI--------------KVY----GHNVIS--HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPM 193 (318)
T ss_dssp TTTTEEEEECCCSS--------------CEE----SCEEEE--ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCC
T ss_pred CCCCCEeECCCCCC--------------ccc----ccEEEE--ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCC
Confidence 87765332210000 001 111222 35666666653 23599999988754332111
Q ss_pred ccCCccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc
Q psy7108 194 TQNKSLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD 242 (703)
Q Consensus 194 ~~~~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~ 242 (703)
+.. ... .++ ..-+++.+++++..+ .+....+.+||..+.+
T Consensus 194 p~~--r~~-----~~~-~~~~~~iyv~GG~~~-~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 194 KTP--RSM-----FGV-AIHKGKIVIAGGVTE-DGLSASVEAFDLKTNK 233 (318)
T ss_dssp SSC--CBS-----CEE-EEETTEEEEEEEEET-TEEEEEEEEEETTTCC
T ss_pred CCC--ccc-----ceE-EEECCEEEEEcCcCC-CCccceEEEEECCCCe
Confidence 111 111 111 223566677765443 2222467788877653
No 356
>3fle_A SE_1780 protein; structural genomics, APC61035.1, PSI-2, protein structure in midwest center for structural genomics, MCSG; 2.01A {Staphylococcus epidermidis}
Probab=92.39 E-value=0.031 Score=55.00 Aligned_cols=52 Identities=15% Similarity=0.139 Sum_probs=41.3
Q ss_pred chHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHH--HHHHHheeccc
Q psy7108 612 DTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQ--TKVRLNVLWAQ 663 (703)
Q Consensus 612 d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~--~~i~~~~~l~p 663 (703)
++-+.++++....+.++++.||||+|+.++..++..+|.-. .+|+.+|.++.
T Consensus 82 ~l~~~i~~l~~~~~~~~~~lvGHSmGG~ia~~~~~~~~~~~~~~~v~~lv~i~~ 135 (249)
T 3fle_A 82 WIKEVLSQLKSQFGIQQFNFVGHSMGNMSFAFYMKNYGDDRHLPQLKKEVNIAG 135 (249)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHHSSCSSSCEEEEEEEESC
T ss_pred HHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHCcccccccccceEEEeCC
Confidence 36678888888888889999999999999888887755311 25888888883
No 357
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=92.39 E-value=0.016 Score=57.57 Aligned_cols=53 Identities=21% Similarity=0.282 Sum_probs=37.9
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.+.++++....+..++.++|||+||..++..+.+.| ++++.++..+|..
T Consensus 97 ~~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 149 (303)
T 3pe6_A 97 VRDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERP---GHFAGMVLISPLV 149 (303)
T ss_dssp HHHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHST---TTCSEEEEESCSS
T ss_pred HHHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCc---ccccEEEEECccc
Confidence 4577778888877666679999999999987776665443 3466666666543
No 358
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=92.37 E-value=0.0093 Score=57.65 Aligned_cols=51 Identities=16% Similarity=0.130 Sum_probs=36.9
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.++++++... ..++.++|||+||..++..+.+.|+ .++..+..+|..
T Consensus 78 ~~d~~~~i~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~p~~ 128 (251)
T 3dkr_A 78 WAESSAAVAHMTAK--YAKVFVFGLSLGGIFAMKALETLPG---ITAGGVFSSPIL 128 (251)
T ss_dssp HHHHHHHHHHHHTT--CSEEEEEESHHHHHHHHHHHHHCSS---CCEEEESSCCCC
T ss_pred HHHHHHHHHHHHHh--cCCeEEEEechHHHHHHHHHHhCcc---ceeeEEEecchh
Confidence 45777788888876 5799999999999887776665443 455555555543
No 359
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A {Mycobacterium tuberculosis}
Probab=92.37 E-value=0.055 Score=55.27 Aligned_cols=47 Identities=21% Similarity=0.282 Sum_probs=36.6
Q ss_pred HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.+.-++...+.++++++|||+|+.+++.++..+|+ +++.+++++|..
T Consensus 135 dl~~~l~~l~~~~v~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 181 (330)
T 3p2m_A 135 TLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPD---LVGELVLVDVTP 181 (330)
T ss_dssp HHHHHHHHSSTTCCEEEEETHHHHHHHHHHHHCTT---TCSEEEEESCCH
T ss_pred HHHHHHHHhCCCCcEEEEECHhHHHHHHHHHhChh---hcceEEEEcCCC
Confidence 34444555566789999999999999999988775 577888888654
No 360
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=92.36 E-value=0.053 Score=52.89 Aligned_cols=52 Identities=19% Similarity=0.167 Sum_probs=43.7
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
.|+-+.++++....+..+++.+|||+|+.+++.++.. ..++.+++++|+..+
T Consensus 80 ~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~v~~~v~~~~~~~~ 131 (275)
T 3h04_A 80 EDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD-----RDIDGVIDFYGYSRI 131 (275)
T ss_dssp HHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH-----SCCSEEEEESCCSCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc-----CCccEEEeccccccc
Confidence 5677899999998888899999999999998887776 567788888887754
No 361
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase, cinnamoyl/Fe esterase, hydroxycinammates, extracellular; HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A* 3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Probab=92.35 E-value=0.045 Score=53.64 Aligned_cols=53 Identities=23% Similarity=0.368 Sum_probs=44.4
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-|+.+.++++....+..+++++|||+|+.+++.++..+|+ +++.+++++|...
T Consensus 103 ~d~~~~i~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~v~~~v~~~~~~~ 155 (270)
T 3pfb_A 103 EDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD---LIKKVVLLAPAAT 155 (270)
T ss_dssp HHHHHHHHHHHTCTTEEEEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCTH
T ss_pred HhHHHHHHHHHhCcCCCeEEEEEeCchhHHHHHHHHhCch---hhcEEEEeccccc
Confidence 4778899999888777799999999999999988887665 4778888888764
No 362
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=92.35 E-value=2.7 Score=42.21 Aligned_cols=189 Identities=11% Similarity=0.071 Sum_probs=91.4
Q ss_pred EEEEEeCCCcEEEEEcCCCceeEEEecC-CCcEEEEEEecCCCEEEEEEC----C-------CeEEEEEcCCCcEEEEEe
Q psy7108 63 GMVSASWDKTVKLWNAVETDTQHETIQL-LSDALCVAYKPDGTEIVVATL----D-------GQLIMFDVESAAQVGSVE 130 (703)
Q Consensus 63 ~L~sgs~Dg~V~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~~las~s~----d-------g~I~vwd~~~~~~~~~~~ 130 (703)
+++.|+ ..+.+||..+++-....... .......+...+++.++.|+. + ..+.+||..+.+-.. +.
T Consensus 7 l~~~GG--~~~~~yd~~~~~W~~~~~~~p~~r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~-~~ 83 (315)
T 4asc_A 7 IFMISE--EGAVAYDPAANECYCASLSSQVPKNHVSLVTKENQVFVAGGLFYNEDNKEDPMSAYFLQFDHLDSEWLG-MP 83 (315)
T ss_dssp EEEEET--TEEEEEETTTTEEEEEECCCCSCSSEEEEECTTCCEEEEEEEEECSSCSSSCEEEEEEEEETTTTEEEE-CC
T ss_pred EEEEcC--CceEEECCCCCeEecCCCCCCCCccceEEEEECCEEEEEcCcccCCCCCccccccceEEecCCCCeEEE-CC
Confidence 445555 46889998877532211111 122233334457788888874 1 127788887765322 11
Q ss_pred ccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--------CcEEEEECCCCceEEEEEeccCCccccc
Q psy7108 131 ARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--------KYICIYSSREGILLKKFTITQNKSLDGI 202 (703)
Q Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--------g~I~lwD~~~~~~~~~~~~~~~~~~~~~ 202 (703)
... . ... ....+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+..
T Consensus 84 ~~p---~----------~r~----~~~~~~~--~~~lyv~GG~~~~~~~~~~~~~~~~d~~~~~W~~~~~~p~~------ 138 (315)
T 4asc_A 84 PLP---S----------PRC----LFGLGEA--LNSIYVVGGREIKDGERCLDSVMCYDRLSFKWGESDPLPYV------ 138 (315)
T ss_dssp CBS---S----------CEE----SCEEEEE--TTEEEEECCEESSTTCCBCCCEEEEETTTTEEEECCCCSSC------
T ss_pred CCC---c----------chh----ceeEEEE--CCEEEEEeCCcCCCCCcccceEEEECCCCCcEeECCCCCCc------
Confidence 100 0 000 1112222 56666666632 4589999988754322111111
Q ss_pred cccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCc--cceeecCCccceEEEEEcCCCCEEEEEeCCC------E
Q psy7108 203 NDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGD--MAARVLKPEVRVFCVKFSPTGQAWVAATTEG------V 274 (703)
Q Consensus 203 ~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~--~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg------v 274 (703)
.....+..-+++.+++++..........+.+||..+.+ .+............+.+ +++.++.|+.++ +
T Consensus 139 --r~~~~~~~~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~ 214 (315)
T 4asc_A 139 --VYGHTVLSHMDLVYVIGGKGSDRKCLNKMCVYDPKKFEWKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSA 214 (315)
T ss_dssp --CBSCEEEEETTEEEEECCBCTTSCBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEE
T ss_pred --ccceeEEEECCEEEEEeCCCCCCcccceEEEEeCCCCeEEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceE
Confidence 11112223456666666652222223467788877653 22222111112222222 566677776543 5
Q ss_pred EEEEcCCCc
Q psy7108 275 HIYSLDSGY 283 (703)
Q Consensus 275 ~iwd~~~~~ 283 (703)
.+||..+.+
T Consensus 215 ~~yd~~~~~ 223 (315)
T 4asc_A 215 EVYSITDNK 223 (315)
T ss_dssp EEEETTTTE
T ss_pred EEEECCCCe
Confidence 678876653
No 363
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=92.23 E-value=0.03 Score=54.99 Aligned_cols=48 Identities=27% Similarity=0.446 Sum_probs=32.3
Q ss_pred hhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 533 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 533 ~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
+.+..++..-+..++.++|||+||+.++..+.+.| ++++.++..+|..
T Consensus 83 ~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~ 130 (286)
T 3qit_A 83 AQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRP---KKIKELILVELPL 130 (286)
T ss_dssp HHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCCC
T ss_pred HHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhCh---hhccEEEEecCCC
Confidence 33444454445678999999999988877666544 3566666666543
No 364
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold seven-stranded beta-sandwich, structural genomics, structural genomics consortium, SGC; 2.40A {Homo sapiens}
Probab=92.21 E-value=0.017 Score=61.70 Aligned_cols=52 Identities=25% Similarity=0.218 Sum_probs=38.2
Q ss_pred cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
+.|+.++++|+.+..+ ..+++++|||+||..++.+..+.|+ ++..+..+|..
T Consensus 206 ~~d~~~~~~~l~~~~~v~~~~i~l~G~S~GG~lAl~~a~~~p~----v~a~V~~~~~~ 259 (422)
T 3k2i_A 206 LEYFEEAVCYMLQHPQVKGPGIGLLGISLGADICLSMASFLKN----VSATVSINGSG 259 (422)
T ss_dssp THHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSS----EEEEEEESCCS
T ss_pred HHHHHHHHHHHHhCcCcCCCCEEEEEECHHHHHHHHHHhhCcC----ccEEEEEcCcc
Confidence 4466778999988754 4799999999999988776665554 55556655543
No 365
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=92.20 E-value=0.073 Score=52.00 Aligned_cols=52 Identities=29% Similarity=0.270 Sum_probs=42.3
Q ss_pred ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.|++.++++.++..-+ ++++++|||+|+.+++.++..+|+ +|+.++.++|..
T Consensus 58 ~~~~~~~~~~l~~~l~-~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~~ 109 (258)
T 1m33_A 58 ALSLADMAEAVLQQAP-DKAIWLGWSLGGLVASQIALTHPE---RVRALVTVASSP 109 (258)
T ss_dssp CCCHHHHHHHHHTTSC-SSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCS
T ss_pred CcCHHHHHHHHHHHhC-CCeEEEEECHHHHHHHHHHHHhhH---hhceEEEECCCC
Confidence 4667777888877766 789999999999999999988776 577888887653
No 366
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=92.15 E-value=0.024 Score=55.54 Aligned_cols=46 Identities=20% Similarity=0.083 Sum_probs=30.9
Q ss_pred HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
..+++.-+.+++.++|||+||..++..+.+. .++++.++..+|...
T Consensus 82 ~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~---p~~v~~~vl~~~~~~ 127 (278)
T 3oos_A 82 EAIREALYINKWGFAGHSAGGMLALVYATEA---QESLTKIIVGGAAAS 127 (278)
T ss_dssp HHHHHHTTCSCEEEEEETHHHHHHHHHHHHH---GGGEEEEEEESCCSB
T ss_pred HHHHHHhCCCeEEEEeecccHHHHHHHHHhC---chhhCeEEEecCccc
Confidence 3344444557899999999998777665543 345777776666543
No 367
>2fuk_A XC6422 protein; A/B hydrolase, structural genomics, X-RAY diffraction; 1.60A {Xanthomonas campestris} SCOP: c.69.1.36
Probab=92.08 E-value=0.057 Score=51.21 Aligned_cols=53 Identities=21% Similarity=0.149 Sum_probs=44.4
Q ss_pred ecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 610 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 610 ~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
..|+.+.++++....+..++.++|||+|+.+++.++... +++.+++++|....
T Consensus 94 ~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~~-----~v~~~v~~~~~~~~ 146 (220)
T 2fuk_A 94 QDDLRAVAEWVRAQRPTDTLWLAGFSFGAYVSLRAAAAL-----EPQVLISIAPPAGR 146 (220)
T ss_dssp HHHHHHHHHHHHHHCTTSEEEEEEETHHHHHHHHHHHHH-----CCSEEEEESCCBTT
T ss_pred HHHHHHHHHHHHhcCCCCcEEEEEECHHHHHHHHHHhhc-----cccEEEEecccccc
Confidence 467889999999887777899999999999998887763 67888888887654
No 368
>3fnb_A Acylaminoacyl peptidase SMU_737; alpha-beta-alpha sandwich, helix bundle, structural genomics protein structure initiative; HET: PGE; 2.12A {Streptococcus mutans}
Probab=92.07 E-value=0.022 Score=60.47 Aligned_cols=51 Identities=14% Similarity=0.020 Sum_probs=37.7
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
..|+.++++|+.... .++.++|||+||+.++.+..+.| +++..++.+|...
T Consensus 213 ~~d~~~~~~~l~~~~--~~v~l~G~S~GG~~a~~~a~~~p----~v~~~v~~~p~~~ 263 (405)
T 3fnb_A 213 RAAISAILDWYQAPT--EKIAIAGFSGGGYFTAQAVEKDK----RIKAWIASTPIYD 263 (405)
T ss_dssp HHHHHHHHHHCCCSS--SCEEEEEETTHHHHHHHHHTTCT----TCCEEEEESCCSC
T ss_pred HHHHHHHHHHHHhcC--CCEEEEEEChhHHHHHHHHhcCc----CeEEEEEecCcCC
Confidence 346677888888664 78999999999998877766654 4566666666543
No 369
>3pe6_A Monoglyceride lipase; alpha-beta hydrolase fold, 2-arachidonyl-glycerol, M associated, hydrolase, hydrolase-hydrolase inhibitor comple; HET: ZYH; 1.35A {Homo sapiens} PDB: 3jw8_A 3jwe_A*
Probab=92.06 E-value=0.075 Score=52.59 Aligned_cols=54 Identities=20% Similarity=0.273 Sum_probs=45.2
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
-|+-+.++++....+..+++++|||+|+.+++.++..+|+ +++.+++++|....
T Consensus 98 ~d~~~~l~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 151 (303)
T 3pe6_A 98 RDVLQHVDSMQKDYPGLPVFLLGHSMGGAIAILTAAERPG---HFAGMVLISPLVLA 151 (303)
T ss_dssp HHHHHHHHHHHHHSTTCCEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCSSSB
T ss_pred HHHHHHHHHHhhccCCceEEEEEeCHHHHHHHHHHHhCcc---cccEEEEECccccC
Confidence 4677888888888777789999999999999999888765 57888899887654
No 370
>2q0x_A Protein DUF1749, uncharacterized protein; alpha/beta hydrolase fold, structural genomics, structural G of pathogenic protozoa consortium; 2.20A {Trypanosoma brucei}
Probab=91.99 E-value=0.082 Score=54.47 Aligned_cols=53 Identities=17% Similarity=0.105 Sum_probs=43.4
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhc--CCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGS--LRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s--~~~~~~~~i~~~~~l~p~~~ 666 (703)
+|+.+.++++...-+..+++++|||+|+.+++.++. .+|+ +|+.+|+++|+..
T Consensus 92 ~d~~~~~~~l~~~l~~~~~~LvGhSmGG~iAl~~A~~~~~p~---rV~~lVL~~~~~~ 146 (335)
T 2q0x_A 92 EDVDDLIGILLRDHCMNEVALFATSTGTQLVFELLENSAHKS---SITRVILHGVVCD 146 (335)
T ss_dssp HHHHHHHHHHHHHSCCCCEEEEEEGGGHHHHHHHHHHCTTGG---GEEEEEEEEECCC
T ss_pred HHHHHHHHHHHHHcCCCcEEEEEECHhHHHHHHHHHhccchh---ceeEEEEECCccc
Confidence 678888999887777788999999999999988777 4454 6788888888653
No 371
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta hydrolase, alternative splicing, hydrolase, mitochondrion, polymorphism, serine esterase; 2.10A {Homo sapiens}
Probab=91.99 E-value=0.017 Score=62.36 Aligned_cols=51 Identities=22% Similarity=0.203 Sum_probs=37.6
Q ss_pred cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+.|..++++|+....+ ..+++++|||+||..++....+.|+ ++..+..+|.
T Consensus 222 ~~d~~~a~~~l~~~~~vd~~~i~l~G~S~GG~lAl~~A~~~p~----v~a~V~~~~~ 274 (446)
T 3hlk_A 222 LEYFEEAMNYLLSHPEVKGPGVGLLGISKGGELCLSMASFLKG----ITAAVVINGS 274 (446)
T ss_dssp HHHHHHHHHHHHTSTTBCCSSEEEEEETHHHHHHHHHHHHCSC----EEEEEEESCC
T ss_pred HHHHHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHHhCCC----ceEEEEEcCc
Confidence 4466778999998765 3699999999999988776665554 5555555554
No 372
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=91.90 E-value=0.15 Score=49.49 Aligned_cols=45 Identities=7% Similarity=-0.009 Sum_probs=36.0
Q ss_pred HHHHhhCCCCceEEEEeChhHHHHHHHhcCC-chHHHHHHHheeccccc
Q psy7108 618 DYILNQTGHNSLITLGHSLGTTNVLIAGSLR-PEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 618 ~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~-~~~~~~i~~~~~l~p~~ 665 (703)
.-++...+..+++++|||+|+.+++.++..+ |+ .++.+++++|..
T Consensus 78 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~---~v~~lvl~~~~~ 123 (264)
T 3ibt_A 78 LAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAA---RLPKTIIIDWLL 123 (264)
T ss_dssp HHHHHHTTCCSEEEEEETTHHHHHHHHHHHSCTT---TSCEEEEESCCS
T ss_pred HHHHHhcCCCceEEEecchhHHHHHHHHHhhChh---hhheEEEecCCC
Confidence 3344455667899999999999999999887 75 578888888876
No 373
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase fold, hydrolase; 1.20A {Bacillus SP} PDB: 3rli_A
Probab=91.87 E-value=0.0096 Score=58.71 Aligned_cols=50 Identities=14% Similarity=0.195 Sum_probs=37.3
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|+.+.++++.+. ..++.++|||+||+.++..+.+.|+ ++..+..+|..
T Consensus 94 ~~d~~~~i~~l~~~--~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~ 143 (270)
T 3rm3_A 94 VASVEEGYGWLKQR--CQTIFVTGLSMGGTLTLYLAEHHPD----ICGIVPINAAV 143 (270)
T ss_dssp HHHHHHHHHHHHTT--CSEEEEEEETHHHHHHHHHHHHCTT----CCEEEEESCCS
T ss_pred HHHHHHHHHHHHhh--CCcEEEEEEcHhHHHHHHHHHhCCC----ccEEEEEccee
Confidence 35777888888866 5789999999999988776665544 66666666643
No 374
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=91.83 E-value=0.87 Score=45.77 Aligned_cols=190 Identities=9% Similarity=-0.009 Sum_probs=91.3
Q ss_pred CCCEEEEEeC----C-----CcEEEEEcCCCceeEEEecC---CCcEEEEEEecCCCEEEEEECC-----CeEEEEEcCC
Q psy7108 60 SSTGMVSASW----D-----KTVKLWNAVETDTQHETIQL---LSDALCVAYKPDGTEIVVATLD-----GQLIMFDVES 122 (703)
Q Consensus 60 dg~~L~sgs~----D-----g~V~iWd~~~~~~~~~~~~~---~~~V~~v~~spdg~~las~s~d-----g~I~vwd~~~ 122 (703)
++.+++.|+. + ..+.++|..+..- ...... .....++. -+++.++.|+.+ ..+.+||..+
T Consensus 70 ~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~~--~~~~iyv~GG~~~~~~~~~~~~yd~~~ 146 (308)
T 1zgk_A 70 GGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQW-SPCAPMSVPRNRIGVGV--IDGHIYAVGGSHGCIHHNSVERYEPER 146 (308)
T ss_dssp TTEEEEECCEEEETTEEEECCCEEEEETTTTEE-EECCCCSSCCBTCEEEE--ETTEEEEECCEETTEECCCEEEEETTT
T ss_pred CCEEEEECCCcCCCCCCeecceEEEECCCCCeE-eECCCCCcCccccEEEE--ECCEEEEEcCCCCCcccccEEEECCCC
Confidence 5677777765 2 3577888876631 111111 11112222 266777776643 3588888877
Q ss_pred CcEEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCC
Q psy7108 123 AAQVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNK 197 (703)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~ 197 (703)
.+-...-. .... .....++.+ +++.++.|+.+ ..+.+||+.+.+-...-..+..
T Consensus 147 ~~W~~~~~----~p~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~- 205 (308)
T 1zgk_A 147 DEWHLVAP----MLTR--------------RIGVGVAVL--NRLLYAVGGFDGTNRLNSAECYYPERNEWRMITAMNTI- 205 (308)
T ss_dssp TEEEECCC----CSSC--------------CBSCEEEEE--TTEEEEECCBCSSCBCCCEEEEETTTTEEEECCCCSSC-
T ss_pred CeEeECCC----CCcc--------------ccceEEEEE--CCEEEEEeCCCCCCcCceEEEEeCCCCeEeeCCCCCCc-
Confidence 64322110 0000 011122223 56677777654 4589999987754322111110
Q ss_pred ccccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCCC--
Q psy7108 198 SLDGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTEG-- 273 (703)
Q Consensus 198 ~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~Dg-- 273 (703)
. .-.+++ .-+++.+++++..+ ......+.+||..+.+-. ............+.+ +++.++.|+.++
T Consensus 206 -r-----~~~~~~-~~~~~iyv~GG~~~-~~~~~~v~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~ 275 (308)
T 1zgk_A 206 -R-----SGAGVC-VLHNCIYAAGGYDG-QDQLNSVERYDVETETWTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHT 275 (308)
T ss_dssp -C-----BSCEEE-EETTEEEEECCBCS-SSBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSC
T ss_pred -c-----ccceEE-EECCEEEEEeCCCC-CCccceEEEEeCCCCcEEECCCCCCCccceEEEEE--CCEEEEEcCcCCCc
Confidence 0 111122 22566666665443 222246788887765322 111111112222222 566667776432
Q ss_pred ----EEEEEcCCCc
Q psy7108 274 ----VHIYSLDSGY 283 (703)
Q Consensus 274 ----v~iwd~~~~~ 283 (703)
+.+||..+.+
T Consensus 276 ~~~~v~~yd~~~~~ 289 (308)
T 1zgk_A 276 FLDSVECYDPDTDT 289 (308)
T ss_dssp BCCEEEEEETTTTE
T ss_pred ccceEEEEcCCCCE
Confidence 6677876653
No 375
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=91.80 E-value=0.021 Score=57.27 Aligned_cols=46 Identities=24% Similarity=0.254 Sum_probs=31.3
Q ss_pred hHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 534 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 534 ~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.+..++..-+.+++.++|||+||..++.+..+.|+ +++.++..+|.
T Consensus 103 ~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~ 148 (315)
T 4f0j_A 103 NTHALLERLGVARASVIGHSMGGMLATRYALLYPR---QVERLVLVNPI 148 (315)
T ss_dssp HHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCS
T ss_pred HHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcH---hhheeEEecCc
Confidence 34444544456799999999999887776665443 56666666654
No 376
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=91.73 E-value=0.015 Score=60.02 Aligned_cols=52 Identities=23% Similarity=0.217 Sum_probs=38.3
Q ss_pred cccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 526 LGLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 526 ~g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
.-+.|+.++++|+..... .++++++|||+||..++....+.|+ ++..+..+|
T Consensus 179 ~~~~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~----v~~~vl~~p 232 (346)
T 3fcy_A 179 HIFLDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR----VRKVVSEYP 232 (346)
T ss_dssp HHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT----CCEEEEESC
T ss_pred HHHHHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc----ccEEEECCC
Confidence 345788889999987763 4799999999999887776655443 555555555
No 377
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=91.70 E-value=14 Score=39.33 Aligned_cols=107 Identities=12% Similarity=0.119 Sum_probs=61.4
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEec---------CCCcEEEEEEecC---CCEEEEEEC---
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQ---------LLSDALCVAYKPD---GTEIVVATL--- 111 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~---------~~~~V~~v~~spd---g~~las~s~--- 111 (703)
-..-.+++|.| +|+++++-...+.|++++..++.. ..+.. .......++|+|| +..|.++..
T Consensus 26 l~~P~~~a~~p--dG~l~V~e~~gg~I~~~~~~~g~~-~~~~~~~~~~~~~~g~~Gllgia~~Pdf~~~g~lYv~~s~~~ 102 (454)
T 1cru_A 26 LNKPHALLWGP--DNQIWLTERATGKILRVNPESGSV-KTVFQVPEIVNDADGQNGLLGFAFHPDFKNNPYIYISGTFKN 102 (454)
T ss_dssp CSSEEEEEECT--TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCCTTSSCSEEEEEECTTTTTSCEEEEEEEEEC
T ss_pred CCCceEEEEcC--CCcEEEEEcCCCEEEEEECCCCcE-eEEecCCccccccCCCCceeEEEECCCcCcCCEEEEEEeccc
Confidence 34567999999 999887765445688777544432 22211 2456789999996 555544432
Q ss_pred ----------CCeEEEEEcCCC--cE---EEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEe
Q psy7108 112 ----------DGQLIMFDVESA--AQ---VGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAG 172 (703)
Q Consensus 112 ----------dg~I~vwd~~~~--~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s 172 (703)
...|.-++...+ +. ...+.... .........++|.|||++.++.+
T Consensus 103 ~~~~~~~~~~~~~v~r~~~~~~~~~~~~~~~i~~~~p----------------~~~~H~~~~l~f~pDG~Lyv~~G 162 (454)
T 1cru_A 103 PKSTDKELPNQTIIRRYTYNKSTDTLEKPVDLLAGLP----------------SSKDHQSGRLVIGPDQKIYYTIG 162 (454)
T ss_dssp TTC--CCSCEEEEEEEEEEETTTTEEEEEEEEEEEEC----------------CCSSCCEEEEEECTTSCEEEEEC
T ss_pred cCCCccccccccEEEEEEECCCCCCcCCcEEEEEcCC----------------CCCCCCCCeEeECCCCeEEEEEC
Confidence 134555655332 11 11111100 00112468899999998777654
No 378
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=91.69 E-value=0.067 Score=51.85 Aligned_cols=34 Identities=26% Similarity=0.531 Sum_probs=26.2
Q ss_pred cceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 545 NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 545 ~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
.++.++|||+||+.++....+.|+ +++..+..+|
T Consensus 73 ~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~ 106 (258)
T 3dqz_A 73 EEVILVGFSFGGINIALAADIFPA---KIKVLVFLNA 106 (258)
T ss_dssp CCEEEEEETTHHHHHHHHHTTCGG---GEEEEEEESC
T ss_pred CceEEEEeChhHHHHHHHHHhChH---hhcEEEEecC
Confidence 789999999999988887776654 5666665555
No 379
>2wtm_A EST1E; hydrolase; 1.60A {Clostridium proteoclasticum} PDB: 2wtn_A*
Probab=91.68 E-value=0.025 Score=55.32 Aligned_cols=51 Identities=18% Similarity=0.276 Sum_probs=36.4
Q ss_pred CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.|+.+.++++.+..+.+++.++|||+||..++....+.| ++++.++..+|.
T Consensus 84 ~d~~~~~~~l~~~~~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 134 (251)
T 2wtm_A 84 TNILAVVDYAKKLDFVTDIYMAGHSQGGLSVMLAAAMER---DIIKALIPLSPA 134 (251)
T ss_dssp HHHHHHHHHHTTCTTEEEEEEEEETHHHHHHHHHHHHTT---TTEEEEEEESCC
T ss_pred HHHHHHHHHHHcCcccceEEEEEECcchHHHHHHHHhCc---ccceEEEEECcH
Confidence 466777888876544468999999999988776555444 346666666664
No 380
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=91.66 E-value=0.067 Score=54.48 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=30.5
Q ss_pred CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 626 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 626 ~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
.+++++||||+|+++++.++..+|+ +|+.+++++|.
T Consensus 103 ~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvl~~~~ 138 (328)
T 2cjp_A 103 EEKVFVVAHDWGALIAWHLCLFRPD---KVKALVNLSVH 138 (328)
T ss_dssp CSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred CCCeEEEEECHHHHHHHHHHHhChh---heeEEEEEccC
Confidence 5689999999999999999988776 57788887754
No 381
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=91.63 E-value=0.016 Score=55.68 Aligned_cols=43 Identities=28% Similarity=0.283 Sum_probs=33.3
Q ss_pred hcccCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCc
Q psy7108 525 ELGLYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRP 567 (703)
Q Consensus 525 ~~g~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~ 567 (703)
+....|+.++++|+..... ..+++++|||+||..++....+.|
T Consensus 94 ~~~~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~ 137 (236)
T 1zi8_A 94 EAGVGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY 137 (236)
T ss_dssp HHHHHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC
T ss_pred chhhHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC
Confidence 3445688889999987754 479999999999988777665544
No 382
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.62 E-value=6.2 Score=37.48 Aligned_cols=137 Identities=8% Similarity=-0.020 Sum_probs=74.8
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCce-----eEEEecC--CCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE------
Q psy7108 60 SSTGMVSASWDKTVKLWNAVETDT-----QHETIQL--LSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV------ 126 (703)
Q Consensus 60 dg~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~--~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~------ 126 (703)
....|+....| +++.=....+.. ....... =..+.+++|+|+|.+.++ .+|.++-.+..+.+..
T Consensus 3 ~~~~l~~v~~d-~~y~G~~P~~~~~~~~~~a~~iG~~gw~~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~ 79 (236)
T 1tl2_A 3 GESMLRGVYQD-KFYQGTYPQNKNDNWLARATLIGKGGWSNFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRA 79 (236)
T ss_dssp CCCCEEEEETT-EEEEESCCCSTTCCHHHHSEEEESSSCTTCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHC
T ss_pred cceEEEEEeCC-cEEecCCCCCcccchhhhccccCccccccceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccc
Confidence 34566677777 665544443331 1122222 246779999999986666 6777666665432110
Q ss_pred EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108 127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFI 206 (703)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v 206 (703)
..+ +... -....++.|.|+|.+.++ .||.|+-++..+..... ........-.+--..+
T Consensus 80 t~I-G~~G------------------w~~F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~-Wl~~a~~vg~~gw~~~ 137 (236)
T 1tl2_A 80 KKI-GNGG------------------WNQFQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDN-WIARATEVGSGGWSGF 137 (236)
T ss_dssp EEE-ECSC------------------GGGCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCC-HHHHSEEEECSSGGGE
T ss_pred cEe-cccc------------------cccceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCc-eeccccEeccCCCCce
Confidence 011 0000 002468899999987777 56988888764321110 0000000000011356
Q ss_pred eeeeeccCCCEEEEE
Q psy7108 207 NRRKMTEFGNVSLIE 221 (703)
Q Consensus 207 ~~~~~spdg~~l~~~ 221 (703)
..+.+.|+|...++.
T Consensus 138 ~~lff~p~G~Lyav~ 152 (236)
T 1tl2_A 138 KFLFFHPNGYLYAVH 152 (236)
T ss_dssp EEEEECTTSCEEEEE
T ss_pred EEEEECCCceEEEEe
Confidence 889999999988887
No 383
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=91.60 E-value=0.015 Score=60.07 Aligned_cols=51 Identities=22% Similarity=0.405 Sum_probs=36.0
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchh-hhhHHHhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEY-QTKVRLNVLWAQ 581 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~-~~~~~~~~~~~p 581 (703)
..|+.+.++++....+..++.++|||+||..++..+.+ + .++++.++..+|
T Consensus 127 ~~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~---~~p~~v~~lvl~~~ 178 (354)
T 2rau_A 127 ISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSL---YWKNDIKGLILLDG 178 (354)
T ss_dssp HHHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHH---HHHHHEEEEEEESC
T ss_pred HHHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHh---cCccccceEEEecc
Confidence 35778888888765456789999999999877665543 3 345666666643
No 384
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=91.55 E-value=1.7 Score=43.36 Aligned_cols=191 Identities=9% Similarity=0.055 Sum_probs=91.2
Q ss_pred CCEEEEEeCC----CcEEEEEcCCCceeEEEecCCCc--EEEEEEecCCCEEEEEECC-----CeEEEEEcCCCcEEEEE
Q psy7108 61 STGMVSASWD----KTVKLWNAVETDTQHETIQLLSD--ALCVAYKPDGTEIVVATLD-----GQLIMFDVESAAQVGSV 129 (703)
Q Consensus 61 g~~L~sgs~D----g~V~iWd~~~~~~~~~~~~~~~~--V~~v~~spdg~~las~s~d-----g~I~vwd~~~~~~~~~~ 129 (703)
+.+++.|+.+ ..+..+|..+.. -........+ -.+++ .-+++.++.|+.+ ..+.+||..+.+-...
T Consensus 16 ~~i~v~GG~~~~~~~~~~~~d~~~~~-W~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~d~~~~~W~~~- 92 (302)
T 2xn4_A 16 KLMVVVGGQAPKAIRSVECYDFKEER-WHQVAELPSRRCRAGMV-YMAGLVFAVGGFNGSLRVRTVDSYDPVKDQWTSV- 92 (302)
T ss_dssp EEEEEECCBSSSBCCCEEEEETTTTE-EEEECCCSSCCBSCEEE-EETTEEEEESCBCSSSBCCCEEEEETTTTEEEEE-
T ss_pred CEEEEECCCCCCCCCcEEEEcCcCCc-EeEcccCCcccccceEE-EECCEEEEEeCcCCCccccceEEECCCCCceeeC-
Confidence 4556666543 357788887663 2222111111 11222 2266777777754 3588899887653322
Q ss_pred eccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCC-----cEEEEECCCCceEEEEEeccCCccccccc
Q psy7108 130 EARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSK-----YICIYSSREGILLKKFTITQNKSLDGIND 204 (703)
Q Consensus 130 ~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg-----~I~lwD~~~~~~~~~~~~~~~~~~~~~~~ 204 (703)
.... .. ......+.+ +++.++.|+.++ .+.+||+.+.+-...-..+.. ...
T Consensus 93 ~~~p---~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~d~~~~~W~~~~~~p~~--r~~--- 148 (302)
T 2xn4_A 93 ANMR---DR--------------RSTLGAAVL--NGLLYAVGGFDGSTGLSSVEAYNIKSNEWFHVAPMNTR--RSS--- 148 (302)
T ss_dssp CCCS---SC--------------CBSCEEEEE--TTEEEEEEEECSSCEEEEEEEEETTTTEEEEECCCSSC--CBS---
T ss_pred CCCC---cc--------------ccceEEEEE--CCEEEEEcCCCCCccCceEEEEeCCCCeEeecCCCCCc--ccC---
Confidence 1100 00 001122222 566777776553 588899887754432111111 111
Q ss_pred cceeeeeccCCCEEEEEcccCCCC-CeeEEECCCCCCCccc--eeecCCccceEEEEEcCCCCEEEEEeCC-----C-EE
Q psy7108 205 FINRRKMTEFGNVSLIETRETHEG-GNVVLKLPGVKKGDMA--ARVLKPEVRVFCVKFSPTGQAWVAATTE-----G-VH 275 (703)
Q Consensus 205 ~v~~~~~spdg~~l~~~~~~~~~~-~~~~i~iwd~~~~~~~--~~~~~h~~~V~~l~~spdg~~l~s~s~D-----g-v~ 275 (703)
.+ +..-+++.+++++..+... ....+..||..+.+-. ............+.+ +++.++.|+.+ . +.
T Consensus 149 --~~-~~~~~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~ 223 (302)
T 2xn4_A 149 --VG-VGVVGGLLYAVGGYDVASRQCLSTVECYNATTNEWTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVE 223 (302)
T ss_dssp --CE-EEEETTEEEEECCEETTTTEECCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEE
T ss_pred --ce-EEEECCEEEEEeCCCCCCCccccEEEEEeCCCCcEEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEE
Confidence 11 1223566666665433210 1235777887765322 111111122222222 56666777653 2 77
Q ss_pred EEEcCCCc
Q psy7108 276 IYSLDSGY 283 (703)
Q Consensus 276 iwd~~~~~ 283 (703)
+||..+.+
T Consensus 224 ~yd~~~~~ 231 (302)
T 2xn4_A 224 VYDPTTNA 231 (302)
T ss_dssp EEETTTTE
T ss_pred EEeCCCCC
Confidence 88887654
No 385
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=91.49 E-value=18 Score=43.95 Aligned_cols=74 Identities=14% Similarity=0.224 Sum_probs=47.1
Q ss_pred EEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCC-CcEEEEEecc
Q psy7108 54 EFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVES-AAQVGSVEAR 132 (703)
Q Consensus 54 ~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~-~~~~~~~~~~ 132 (703)
-.+| ..+.+|--. ..+++|+|+++..+..... ...+|.-=.|-.+. .|+..+ +..|+.|++.. ..+...+..|
T Consensus 72 IMnP--~~~iiALra-g~~lQiFnl~~k~klks~~-~~e~VvfWkWis~~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~ 145 (1630)
T 1xi4_A 72 IMNP--ASKVIALKA-GKTLQIFNIEMKSKMKAHT-MTDDVTFWKWISLN-TVALVT-DNAVYHWSMEGESQPVKMFDRH 145 (1630)
T ss_pred ccCC--CcceEEEec-CCeEEEeehHHhhhhcccc-cCCCceEEEecCCC-eeEEEc-CCeEEEeccCCCCccHHHHhcc
Confidence 4577 667666654 5789999998876554433 45567777776444 344432 56899999964 3444444444
Q ss_pred c
Q psy7108 133 R 133 (703)
Q Consensus 133 ~ 133 (703)
.
T Consensus 146 ~ 146 (1630)
T 1xi4_A 146 S 146 (1630)
T ss_pred h
Confidence 3
No 386
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=91.40 E-value=3.3 Score=41.60 Aligned_cols=182 Identities=14% Similarity=0.154 Sum_probs=86.2
Q ss_pred cEEEEEcCCCceeEEEecC-CCcEEEEEEecCCCEEEEEEC----CC-------eEEEEEcCCCcEEEEEeccccCCCCC
Q psy7108 72 TVKLWNAVETDTQHETIQL-LSDALCVAYKPDGTEIVVATL----DG-------QLIMFDVESAAQVGSVEARRDLDSGR 139 (703)
Q Consensus 72 ~V~iWd~~~~~~~~~~~~~-~~~V~~v~~spdg~~las~s~----dg-------~I~vwd~~~~~~~~~~~~~~~~~~~~ 139 (703)
.+..||..+++-....... .......+...++..++.|+. ++ .+.+||..+.+-... .. ....
T Consensus 25 ~~~~yd~~~~~W~~~~~~~~~~r~~~~~~~~~~~lyv~GG~~~~~~~~~~~~~~~~~~~d~~~~~W~~~-~~---~p~~- 99 (318)
T 2woz_A 25 AAVAYDPMENECYLTALAEQIPRNHSSIVTQQNQVYVVGGLYVDEENKDQPLQSYFFQLDNVSSEWVGL-PP---LPSA- 99 (318)
T ss_dssp EEEEEETTTTEEEEEEECTTSCSSEEEEECSSSCEEEEESSCC-------CCCBEEEEEETTTTEEEEC-SC---BSSC-
T ss_pred ceEEECCCCCceecccCCccCCccceEEEEECCEEEEECCcccCccccCCCccccEEEEeCCCCcEEEC-CC---CCcc-
Confidence 3788898777533221111 122223334557788888873 11 177788876654221 10 0000
Q ss_pred CCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-------CcEEEEECCCCceEEEEEeccCCccccccccceeeeec
Q psy7108 140 LDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-------KYICIYSSREGILLKKFTITQNKSLDGINDFINRRKMT 212 (703)
Q Consensus 140 ~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-------g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 212 (703)
. .....+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.. ..+ ..+..
T Consensus 100 ---------r----~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r~~------~~~~~ 156 (318)
T 2woz_A 100 ---------R----CLFGLGEV--DDKIYVVAGKDLQTEASLDSVLCYDPVAAKWSEVKNLPIK--VYG------HNVIS 156 (318)
T ss_dssp ---------B----CSCEEEEE--TTEEEEEEEEBTTTCCEEEEEEEEETTTTEEEEECCCSSC--EES------CEEEE
T ss_pred ---------c----cccceEEE--CCEEEEEcCccCCCCcccceEEEEeCCCCCEeECCCCCCc--ccc------cEEEE
Confidence 0 01122222 56677777653 3588899987754432111111 111 11222
Q ss_pred cCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEEEEEcCCCCEEEEEeCCC------EEEEEcCCCc
Q psy7108 213 EFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFCVKFSPTGQAWVAATTEG------VHIYSLDSGY 283 (703)
Q Consensus 213 pdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~Dg------v~iwd~~~~~ 283 (703)
.+++.+++++..+.......+.+||..+.+- +............+.+ +++.++.|+.++ +.+||..+.+
T Consensus 157 ~~~~iyv~GG~~~~~~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~ 233 (318)
T 2woz_A 157 HNGMIYCLGGKTDDKKCTNRVFIYNPKKGDWKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKTNK 233 (318)
T ss_dssp ETTEEEEECCEESSSCBCCCEEEEETTTTEEEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTTCC
T ss_pred ECCEEEEEcCCCCCCCccceEEEEcCCCCEEEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCCCe
Confidence 4666666665432222224577888776532 2111111111222222 566667776432 5678876653
No 387
>3s25_A Hypothetical 7-bladed beta-propeller-like protein; structural genomics, joint center F structural genomics, JCSG; 1.88A {Eubacterium rectale}
Probab=91.36 E-value=13 Score=37.23 Aligned_cols=127 Identities=10% Similarity=0.038 Sum_probs=76.8
Q ss_pred EEEcCCCCCCEEEEEe--CCCcEEEE--EcCCCceeEEEecCCCcEEEEEEecCCCEEEEEEC-CCeEEEEEcCCCcEEE
Q psy7108 53 IEFSPVLSSTGMVSAS--WDKTVKLW--NAVETDTQHETIQLLSDALCVAYKPDGTEIVVATL-DGQLIMFDVESAAQVG 127 (703)
Q Consensus 53 l~~sp~~dg~~L~sgs--~Dg~V~iW--d~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~-dg~I~vwd~~~~~~~~ 127 (703)
..|++ +++.|+-.. .++.-.|+ ++... ....+..+.. .+++++++.|+..+. ..+|.+.+++.+....
T Consensus 109 ~~~s~--~g~~Iy~~~~~~~~~~~Iy~~~~dGs-~~~~lt~~~~----~~~~~~g~~iy~t~~g~~~Iy~~~l~g~~~~~ 181 (302)
T 3s25_A 109 IYASL--IGNYIYYLHYDTQTATSLYRIRIDGE-EKKKIKNHYL----FTCNTSDRYFYYNNPKNGQLYRYDTASQSEAL 181 (302)
T ss_dssp EEEEE--ETTEEEEEEESSSSCEEEEEEETTSC-CCEEEESSCC----CCSEEETTEEEEECTTTCCEEEEETTTTEEEE
T ss_pred cEEEE--eCCEEEEEeecCCCCceEEEEECCCC-CeEEEeCCCc----eEeeEECCEEEEEeCCCceEEEEECCCCCEEE
Confidence 36788 888888776 34444444 54433 3344444433 457888999887765 5789998987766544
Q ss_pred EEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC--CcEEEEECCCCceEEEEEeccCCcccccccc
Q psy7108 128 SVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS--KYICIYSSREGILLKKFTITQNKSLDGINDF 205 (703)
Q Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d--g~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~ 205 (703)
.+.+ ... ..++|++.+|+-...+ ..|..-++..... ..+. . ..
T Consensus 182 l~~~-----------------------~~~-~~~~P~g~~iy~t~~~~~~~I~~~~ldG~~~-~~Lt--~--------~~ 226 (302)
T 3s25_A 182 FYDC-----------------------NCY-KPVVLDDTNVYYMDVNRDNAIVHVNINNPNP-VVLT--E--------AN 226 (302)
T ss_dssp EECS-----------------------CEE-EEEEEETTEEEEEEGGGTTEEEEECSSSCCC-EECS--C--------SC
T ss_pred EeCC-----------------------Ccc-ceeeecCCEEEEEEcCCCcEEEEEECCCCCe-EEEe--C--------CC
Confidence 4332 122 2356999988876543 3577777765442 2221 0 11
Q ss_pred ceeeeeccCCCEEEEEcc
Q psy7108 206 INRRKMTEFGNVSLIETR 223 (703)
Q Consensus 206 v~~~~~spdg~~l~~~~~ 223 (703)
+ ..++|+++.++.+..
T Consensus 227 ~--~~~~~~g~~Iy~~~~ 242 (302)
T 3s25_A 227 I--EHYNVYGSLIFYQRG 242 (302)
T ss_dssp E--EEEEEETTEEEEEEC
T ss_pred c--ceEEECCCEEEEEEC
Confidence 2 348889998887643
No 388
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=91.31 E-value=0.092 Score=48.22 Aligned_cols=53 Identities=23% Similarity=0.197 Sum_probs=38.9
Q ss_pred HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
.+.+..+++..+..+++++|||+|+.+++.++.... ...+++.+++++|....
T Consensus 56 ~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~~-~~~~v~~~v~~~~~~~~ 108 (181)
T 1isp_A 56 SRFVQKVLDETGAKKVDIVAHSMGGANTLYYIKNLD-GGNKVANVVTLGGANRL 108 (181)
T ss_dssp HHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHSS-GGGTEEEEEEESCCGGG
T ss_pred HHHHHHHHHHcCCCeEEEEEECccHHHHHHHHHhcC-CCceEEEEEEEcCcccc
Confidence 345555566666678999999999999988877641 12468889999987654
No 389
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase; 1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A 3pi6_A
Probab=91.30 E-value=0.06 Score=53.61 Aligned_cols=45 Identities=11% Similarity=0.053 Sum_probs=35.0
Q ss_pred HHHHhhCCCCc-eEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 618 DYILNQTGHNS-LITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 618 ~~i~~~t~~~~-~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
..++...+..+ ++++|||+|+.+++.++..+|+ +++.+++++|..
T Consensus 87 ~~~l~~l~~~~p~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 132 (301)
T 3kda_A 87 HKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQA---DIARLVYMEAPI 132 (301)
T ss_dssp HHHHHHHCSSSCEEEEEETHHHHTTHHHHHHCGG---GEEEEEEESSCC
T ss_pred HHHHHHcCCCccEEEEEeCccHHHHHHHHHhChh---hccEEEEEccCC
Confidence 33344446667 9999999999999998888775 588888888753
No 390
>2i3d_A AGR_C_3351P, hypothetical protein ATU1826; structural genomics, APC5865, hydrolase, PSI-2, protein STRU initiative; HET: MSE; 1.50A {Agrobacterium tumefaciens str} SCOP: c.69.1.36
Probab=91.27 E-value=0.11 Score=50.67 Aligned_cols=52 Identities=19% Similarity=0.144 Sum_probs=43.1
Q ss_pred cchHHHHHHHHhhCCC-CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~-~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-|+.+.++++...... .+++++|||+|+.+++.++..+|+ ++.+++++|...
T Consensus 105 ~d~~~~i~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~~~~~ 157 (249)
T 2i3d_A 105 SDAASALDWVQSLHPDSKSCWVAGYSFGAWIGMQLLMRRPE----IEGFMSIAPQPN 157 (249)
T ss_dssp HHHHHHHHHHHHHCTTCCCEEEEEETHHHHHHHHHHHHCTT----EEEEEEESCCTT
T ss_pred HHHHHHHHHHHHhCCCCCeEEEEEECHHHHHHHHHHhcCCC----ccEEEEEcCchh
Confidence 6788999999876543 479999999999999998888776 778888888764
No 391
>4g9e_A AHL-lactonase, alpha/beta hydrolase fold protein; AHL-binding; HET: C4L; 1.09A {Ochrobactrum} PDB: 4g5x_A* 4g8b_A* 4g8d_A 4g8c_A* 4g9g_A
Probab=91.25 E-value=0.028 Score=55.18 Aligned_cols=74 Identities=14% Similarity=0.159 Sum_probs=0.0
Q ss_pred chhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCC
Q psy7108 415 PPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSK 494 (703)
Q Consensus 415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (703)
+..+++ +||.|+..|.||...|........
T Consensus 44 ~~~l~~----~g~~v~~~d~~G~G~s~~~~~~~~---------------------------------------------- 73 (279)
T 4g9e_A 44 LEGEIG----KKWRVIAPDLPGHGKSTDAIDPDR---------------------------------------------- 73 (279)
T ss_dssp HHSHHH----HHEEEEEECCTTSTTSCCCSCHHH----------------------------------------------
T ss_pred HhHHHh----cCCeEEeecCCCCCCCCCCCCccc----------------------------------------------
Q ss_pred cccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108 495 DDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
...+.|..+.+..++..-+..++.++|||+||..++.++.+.|+
T Consensus 74 ------------------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 117 (279)
T 4g9e_A 74 ------------------------------SYSMEGYADAMTEVMQQLGIADAVVFGWSLGGHIGIEMIARYPE 117 (279)
T ss_dssp ------------------------------HSSHHHHHHHHHHHHHHHTCCCCEEEEETHHHHHHHHHTTTCTT
T ss_pred ------------------------------CCCHHHHHHHHHHHHHHhCCCceEEEEECchHHHHHHHHhhCCc
No 392
>1lns_A X-prolyl dipeptidyl aminopetidase; alpha beta hydrolase fold; 2.20A {Lactococcus lactis} SCOP: a.40.2.1 b.18.1.13 c.69.1.21
Probab=91.22 E-value=0.046 Score=63.07 Aligned_cols=53 Identities=23% Similarity=0.226 Sum_probs=37.8
Q ss_pred cCCchhhHHHhHcc---------------C-CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQ---------------T-GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 528 ~~d~~~~~~~i~~~---------------~-~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
..|..++++|+... + ...+++++|||+||++++.++++.|+ .++..+..+|+.
T Consensus 307 ~~D~~a~IdwL~~~~~~~~d~~~~~~v~q~~~~grVgl~G~SyGG~ial~~Aa~~p~---~lkaiV~~~~~~ 375 (763)
T 1lns_A 307 IYSMTAVIDWLNGRARAYTSRKKTHEIKASWANGKVAMTGKSYLGTMAYGAATTGVE---GLELILAEAGIS 375 (763)
T ss_dssp HHHHHHHHHHHTTSSCEESSTTCCCEECCTTEEEEEEEEEETHHHHHHHHHHTTTCT---TEEEEEEESCCS
T ss_pred HHHHHHHHHHHhhcccccccccccccccccCCCCcEEEEEECHHHHHHHHHHHhCCc---ccEEEEEecccc
Confidence 35778899999843 1 12589999999999988887776553 355666665543
No 393
>3h04_A Uncharacterized protein; protein with unknown function, structural genomics, MCSG, PS protein structure initiative; 1.90A {Staphylococcus aureus subsp}
Probab=91.15 E-value=0.016 Score=56.73 Aligned_cols=52 Identities=19% Similarity=0.159 Sum_probs=39.7
Q ss_pred ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
.+.|+.++++++.+.-+..++.++|||+||..++..+.+ .+++..+..+|..
T Consensus 78 ~~~d~~~~~~~l~~~~~~~~i~l~G~S~Gg~~a~~~a~~-----~~v~~~v~~~~~~ 129 (275)
T 3h04_A 78 IIEDVYASFDAIQSQYSNCPIFTFGRSSGAYLSLLIARD-----RDIDGVIDFYGYS 129 (275)
T ss_dssp HHHHHHHHHHHHHHTTTTSCEEEEEETHHHHHHHHHHHH-----SCCSEEEEESCCS
T ss_pred hHHHHHHHHHHHHhhCCCCCEEEEEecHHHHHHHHHhcc-----CCccEEEeccccc
Confidence 456778899999988777899999999999877765543 5566666666654
No 394
>2hdw_A Hypothetical protein PA2218; alpha/beta hydrolase fold, structural genomics, PSI, structure initiative; 2.00A {Pseudomonas aeruginosa}
Probab=91.14 E-value=0.016 Score=60.07 Aligned_cols=86 Identities=15% Similarity=0.113 Sum_probs=0.0
Q ss_pred chhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCC
Q psy7108 415 PPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSK 494 (703)
Q Consensus 415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (703)
++-.+++ +||.|...|.||...|..+.. .|..-
T Consensus 116 ~~~~l~~---~G~~v~~~d~~g~g~s~~~~~---------~~~~~----------------------------------- 148 (367)
T 2hdw_A 116 YAQTMAE---RGFVTLAFDPSYTGESGGQPR---------NVASP----------------------------------- 148 (367)
T ss_dssp HHHHHHH---TTCEEEEECCTTSTTSCCSSS---------SCCCH-----------------------------------
T ss_pred HHHHHHH---CCCEEEEECCCCcCCCCCcCc---------cccch-----------------------------------
Q ss_pred cccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC--CCcceEEEEEecCceeeeeccCCCchhhhh
Q psy7108 495 DDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTK 572 (703)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~ 572 (703)
.....|+.++++|+.... +..+++++|||+||..++....+.| +
T Consensus 149 ------------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p----~ 194 (367)
T 2hdw_A 149 ------------------------------DINTEDFSAAVDFISLLPEVNRERIGVIGICGWGGMALNAVAVDK----R 194 (367)
T ss_dssp ------------------------------HHHHHHHHHHHHHHHHCTTEEEEEEEEEEETHHHHHHHHHHHHCT----T
T ss_pred ------------------------------hhHHHHHHHHHHHHHhCcCCCcCcEEEEEECHHHHHHHHHHhcCC----C
Q ss_pred HHHhhhhhh
Q psy7108 573 VRLNVLWAQ 581 (703)
Q Consensus 573 ~~~~~~~~p 581 (703)
++..+..+|
T Consensus 195 ~~~~v~~~p 203 (367)
T 2hdw_A 195 VKAVVTSTM 203 (367)
T ss_dssp CCEEEEESC
T ss_pred ccEEEEecc
No 395
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=91.00 E-value=0.015 Score=57.33 Aligned_cols=50 Identities=20% Similarity=0.325 Sum_probs=34.1
Q ss_pred CchhhHHHhHc------cCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 530 DTTATIDYILN------QTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 530 d~~~~~~~i~~------~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
|+.++++|+.. .-+..++.++|||+||+.++....+.|+ ++..+.++|..
T Consensus 102 d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~p~~ 157 (262)
T 1jfr_A 102 QLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS----LKAAIPLTGWN 157 (262)
T ss_dssp HHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT----CSEEEEESCCC
T ss_pred HHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc----ceEEEeecccC
Confidence 44567788776 2234689999999999887776655544 56666666643
No 396
>3llc_A Putative hydrolase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE PG4; 1.80A {Agrobacterium vitis}
Probab=90.99 E-value=0.015 Score=57.01 Aligned_cols=51 Identities=25% Similarity=0.182 Sum_probs=34.5
Q ss_pred CCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC---CchhhhhHHHhhhhhhhh
Q psy7108 529 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL---RPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 529 ~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~---~~~~~~~~~~~~~~~p~~ 583 (703)
.|+.+.++++. ..++.++|||+||..++....+ .|+...+++..+..+|..
T Consensus 94 ~d~~~~~~~l~----~~~~~l~G~S~Gg~~a~~~a~~~~~~p~~~~~v~~~il~~~~~ 147 (270)
T 3llc_A 94 EEALAVLDHFK----PEKAILVGSSMGGWIALRLIQELKARHDNPTQVSGMVLIAPAP 147 (270)
T ss_dssp HHHHHHHHHHC----CSEEEEEEETHHHHHHHHHHHHHHTCSCCSCEEEEEEEESCCT
T ss_pred HHHHHHHHHhc----cCCeEEEEeChHHHHHHHHHHHHHhccccccccceeEEecCcc
Confidence 35555555553 5689999999999888776665 442225677777776654
No 397
>3nuz_A Putative acetyl xylan esterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 2.30A {Bacteroides fragilis}
Probab=90.96 E-value=0.04 Score=58.36 Aligned_cols=38 Identities=21% Similarity=0.478 Sum_probs=30.2
Q ss_pred ccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccC
Q psy7108 527 GLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGS 564 (703)
Q Consensus 527 g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~ 564 (703)
...|..++++|+...+. ..+++++|||+||+.++++.+
T Consensus 210 ~~~D~~~ald~l~~~~~vd~~rI~v~G~S~GG~~a~~~aa 249 (398)
T 3nuz_A 210 ASYLDMQVLNWMKTQKHIRKDRIVVSGFSLGTEPMMVLGT 249 (398)
T ss_dssp HHHHHHHHHHHHTTCSSEEEEEEEEEEEGGGHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCCCCCeEEEEEECHhHHHHHHHHh
Confidence 34688889999987764 468999999999988766544
No 398
>2qjw_A Uncharacterized protein XCC1541; putative hydrolase of the alpha/beta superfamily, structural genomics; HET: MSE TLA P6G; 1.35A {Xanthomonas campestris PV}
Probab=90.93 E-value=0.015 Score=53.10 Aligned_cols=48 Identities=17% Similarity=0.151 Sum_probs=34.3
Q ss_pred hhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 532 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 532 ~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
.+.++++.......++.++|||+||..++....+.| ++..+..+|...
T Consensus 61 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~-----~~~~v~~~~~~~ 108 (176)
T 2qjw_A 61 QRLLEIARAATEKGPVVLAGSSLGSYIAAQVSLQVP-----TRALFLMVPPTK 108 (176)
T ss_dssp HHHHHHHHHHHTTSCEEEEEETHHHHHHHHHHTTSC-----CSEEEEESCCSC
T ss_pred HHHHHHHHhcCCCCCEEEEEECHHHHHHHHHHHhcC-----hhheEEECCcCC
Confidence 445566665544579999999999988877776655 666666666543
No 399
>3i2k_A Cocaine esterase; alpha/beta hydrolase, hydrolase; HET: DBC GOL; 1.51A {Rhodococcus SP} PDB: 3i2j_A* 3puh_A 3i2h_A* 3i2i_A* 3i2g_A* 3ida_A* 3i2f_A* 3pui_A 1ju3_A 1ju4_A 1l7q_A 1l7r_A
Probab=90.90 E-value=0.051 Score=60.80 Aligned_cols=52 Identities=17% Similarity=0.050 Sum_probs=37.2
Q ss_pred cCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
..|..++++|+.+.+. ..+++++|||+||++++.++.+.+. .++..+..+|.
T Consensus 91 ~~D~~~~i~~l~~~~~~~~~v~l~G~S~GG~~a~~~a~~~~~---~l~a~v~~~~~ 143 (587)
T 3i2k_A 91 EADAEDTLSWILEQAWCDGNVGMFGVSYLGVTQWQAAVSGVG---GLKAIAPSMAS 143 (587)
T ss_dssp HHHHHHHHHHHHHSTTEEEEEEECEETHHHHHHHHHHTTCCT---TEEEBCEESCC
T ss_pred hHHHHHHHHHHHhCCCCCCeEEEEeeCHHHHHHHHHHhhCCC---ccEEEEEeCCc
Confidence 4677889999987653 3589999999999888776665432 34555555443
No 400
>2h1i_A Carboxylesterase; structural genomics, PSI-2, protein struct initiative, midwest center for structural genomics, MCSG, H; HET: MSE; 2.80A {Bacillus cereus} SCOP: c.69.1.14
Probab=90.86 E-value=0.11 Score=49.32 Aligned_cols=53 Identities=13% Similarity=0.061 Sum_probs=40.3
Q ss_pred chHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 612 DTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 612 d~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
++.+.++++.... ...++.++|||+|+..++.++..+|+ +++.+++++|....
T Consensus 102 ~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~~v~~~~~~~~ 156 (226)
T 2h1i_A 102 ELNEFLDEAAKEYKFDRNNIVAIGYSNGANIAASLLFHYEN---ALKGAVLHHPMVPR 156 (226)
T ss_dssp HHHHHHHHHHHHTTCCTTCEEEEEETHHHHHHHHHHHHCTT---SCSEEEEESCCCSC
T ss_pred HHHHHHHHHHhhcCCCcccEEEEEEChHHHHHHHHHHhChh---hhCEEEEeCCCCCc
Confidence 3455666666666 44789999999999999988887664 57788888887644
No 401
>3g8y_A SUSD/RAGB-associated esterase-like protein; structural genom joint center for structural genomics, JCSG; HET: MSE; 1.90A {Bacteroides vulgatus atcc 8482}
Probab=90.78 E-value=0.037 Score=58.54 Aligned_cols=49 Identities=20% Similarity=0.347 Sum_probs=34.8
Q ss_pred cCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108 528 LYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA 580 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (703)
..|+.++++|+.+.+. ..+++++|||+||+.++.+.+. ..+++..++.+
T Consensus 206 ~~D~~~a~d~l~~~~~vd~~rI~v~G~S~GG~~al~~a~~----~~~i~a~v~~~ 256 (391)
T 3g8y_A 206 SYLDMQVLNWMKAQSYIRKDRIVISGFSLGTEPMMVLGVL----DKDIYAFVYND 256 (391)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEEEEEEEGGGHHHHHHHHHH----CTTCCEEEEES
T ss_pred HHHHHHHHHHHHhccCCCCCeEEEEEEChhHHHHHHHHHc----CCceeEEEEcc
Confidence 3688889999998764 4689999999999877665442 23455544433
No 402
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=90.68 E-value=0.038 Score=54.26 Aligned_cols=56 Identities=13% Similarity=0.062 Sum_probs=40.2
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc---hhhhhHHHhhhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP---EYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~---~~~~~~~~~~~~~p~~~ 584 (703)
..|+.++++|+..... .++.++|||+||..++....+.. ....+++..+..+|...
T Consensus 113 ~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~ 171 (262)
T 2pbl_A 113 TQQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSD 171 (262)
T ss_dssp HHHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCC
T ss_pred HHHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccC
Confidence 5677888999987655 79999999999988777665431 11346777777777543
No 403
>1vlq_A Acetyl xylan esterase; TM0077, structural genomics, JCSG, PR structure initiative, PSI, joint center for structural GENO hydrolase; 2.10A {Thermotoga maritima} SCOP: c.69.1.25 PDB: 3m81_A 3m83_A* 3m82_A*
Probab=90.66 E-value=0.023 Score=58.32 Aligned_cols=106 Identities=12% Similarity=0.020 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccc--cCccc------CcCCccceeeeecccchhhhhhhhcCCcccccccc
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSR--EHVNL------TSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVE 481 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~--~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 481 (703)
+.......+++ +||.|...|.||...|. ....- ......|+...++
T Consensus 109 ~~~~~~~~l~~----~G~~v~~~d~rG~g~s~~~~~~~~~p~~~~~~~~~~~~~~g~~---------------------- 162 (337)
T 1vlq_A 109 GFPHDWLFWPS----MGYICFVMDTRGQGSGWLKGDTPDYPEGPVDPQYPGFMTRGIL---------------------- 162 (337)
T ss_dssp CCGGGGCHHHH----TTCEEEEECCTTCCCSSSCCCCCBCCSSSBCCCCSSSTTTTTT----------------------
T ss_pred CCchhhcchhh----CCCEEEEecCCCCCCcccCCCCcccccccCCCCCCcccccCCC----------------------
Q ss_pred cccCCCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC--CCcceEEEEEecCceee
Q psy7108 482 KMETGSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT--GHNSLITLGHSLGTTNV 559 (703)
Q Consensus 482 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~--~~~~~~~~g~S~G~~~~ 559 (703)
..........+.|+.++++|+.+.. +.++++++|||+||..+
T Consensus 163 ------------------------------------~~~~~~~~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~la 206 (337)
T 1vlq_A 163 ------------------------------------DPRTYYYRRVFTDAVRAVEAAASFPQVDQERIVIAGGSQGGGIA 206 (337)
T ss_dssp ------------------------------------CTTTCHHHHHHHHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHH
T ss_pred ------------------------------------CHHHhHHHHHHHHHHHHHHHHHhCCCCCCCeEEEEEeCHHHHHH
Q ss_pred eeccCCCchhhhhHHHhhhhhh
Q psy7108 560 LIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 560 ~~~~~~~~~~~~~~~~~~~~~p 581 (703)
+.++.+.| +++..+...|
T Consensus 207 ~~~a~~~p----~v~~~vl~~p 224 (337)
T 1vlq_A 207 LAVSALSK----KAKALLCDVP 224 (337)
T ss_dssp HHHHHHCS----SCCEEEEESC
T ss_pred HHHHhcCC----CccEEEECCC
No 404
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad, rotation; 1.60A {Lactobacillus rhamnosus} SCOP: c.69.1.0 PDB: 3dlt_A 3dyi_A 3dyv_A 3e1g_A
Probab=90.57 E-value=0.081 Score=50.81 Aligned_cols=53 Identities=15% Similarity=0.071 Sum_probs=43.6
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG 668 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~ 668 (703)
.|+.+.++++... ..+++++|||+|+.+++.++..+|+ .++.+++++|+....
T Consensus 79 ~d~~~~i~~l~~~--~~~~~l~G~S~Gg~~a~~~a~~~p~---~~~~~i~~~p~~~~~ 131 (251)
T 3dkr_A 79 AESSAAVAHMTAK--YAKVFVFGLSLGGIFAMKALETLPG---ITAGGVFSSPILPGK 131 (251)
T ss_dssp HHHHHHHHHHHTT--CSEEEEEESHHHHHHHHHHHHHCSS---CCEEEESSCCCCTTC
T ss_pred HHHHHHHHHHHHh--cCCeEEEEechHHHHHHHHHHhCcc---ceeeEEEecchhhcc
Confidence 5777889988877 5689999999999999999888776 567788888887643
No 405
>3ott_A Two-component system sensor histidine kinase; beta-propeller, beta-sandwich, transcription; HET: TBR; 2.30A {Bacteroides thetaiotaomicron} PDB: 3va6_A
Probab=90.54 E-value=27 Score=39.66 Aligned_cols=201 Identities=14% Similarity=0.181 Sum_probs=112.7
Q ss_pred CcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEecCCCcEEEEEEecCCCEEEEEECCCeEEEEEcCCCcEE
Q psy7108 47 EGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETIQLLSDALCVAYKPDGTEIVVATLDGQLIMFDVESAAQV 126 (703)
Q Consensus 47 ~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~~~~~~V~~v~~spdg~~las~s~dg~I~vwd~~~~~~~ 126 (703)
...|.++.-.. ++ .|-.|+.+| +..+|..+..-..........|.++.. .+| .|..++.+ -+..+|..+++..
T Consensus 62 ~~~i~~i~~d~--~g-~lWigT~~G-l~~yd~~~~~f~~~~~~~~~~i~~i~~-~~g-~lWigt~~-Gl~~~~~~~~~~~ 134 (758)
T 3ott_A 62 NTRIYCGVIID--NT-YLYMGTDNG-ILVYNYRADRYEQPETDFPTDVRTMAL-QGD-TLWLGALN-GLYTYQLQSRKLT 134 (758)
T ss_dssp SSCEEEEEEET--TT-EEEEEETTE-EEEEETTTTEECCCSCCCCSCEEEEEE-ETT-EEEEEETT-EEEEEETTTCCEE
T ss_pred CceEEEEEEcC--CC-cEEEEeCCC-eEEEeCCCCEEECcccCCCceEEEEEe-cCC-cEEEEcCC-cceeEeCCCCeEE
Confidence 35688888776 55 455555555 678897665321100112335777654 355 45556655 6888998766543
Q ss_pred EEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecCCcEEEEECCCCceEEEEEeccCCccccccccc
Q psy7108 127 GSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQSKYICIYSSREGILLKKFTITQNKSLDGINDFI 206 (703)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~dg~I~lwD~~~~~~~~~~~~~~~~~~~~~~~~v 206 (703)
.+.... .......|.++....+|...+ ++.+ -+..+|..+++.. .+........ ....|
T Consensus 135 -~~~~~~---------------~~l~~~~i~~i~~d~~g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~--~~~~i 193 (758)
T 3ott_A 135 -SFDTRR---------------NGLPNNTIYSIIRTKDNQIYV-GTYN-GLCRYIPSNGKFE-GIPLPVHSSQ--SNLFV 193 (758)
T ss_dssp -EECHHH---------------HCCSCSCEEEEEECTTCCEEE-EETT-EEEEEETTTTEEE-EECCCCCTTC--SSCCE
T ss_pred -EeccCC---------------CCcCCCeEEEEEEcCCCCEEE-EeCC-CHhhCccCCCceE-EecCCCcccc--cccee
Confidence 221110 001123688888888887665 4444 4888898776432 2221111000 11246
Q ss_pred eeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCccceeecCCccceEEEEEcCCCCEEEEEeCCCEEEEEcCCCc
Q psy7108 207 NRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDMAARVLKPEVRVFCVKFSPTGQAWVAATTEGVHIYSLDSGY 283 (703)
Q Consensus 207 ~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~~~~~~~h~~~V~~l~~spdg~~l~s~s~Dgv~iwd~~~~~ 283 (703)
.++...+++..+.+++.. -+..+|..+++......-....|.++...++|...+. +.+|+.+++..++.
T Consensus 194 ~~i~~d~~~~~lWigt~~-------Gl~~~~~~~~~~~~~~~l~~~~i~~i~~d~~g~lWig-T~~Gl~~~~~~~~~ 262 (758)
T 3ott_A 194 NSLLEDTTRQCVWIGTEG-------YLFQYFPSTGQIKQTEAFHNNSIKSLALDGNGDLLAG-TDNGLYVYHNDTTP 262 (758)
T ss_dssp EEEEEETTTTEEEEEEEE-------EEEEEETTTTEEEEEEEEEEEEEEEEEECTTCCEEEE-ETTEEEEECCTTSC
T ss_pred EEEEEECCCCEEEEEECC-------CCeEEcCCCCeEEeccCCCCCeEEEEEEcCCCCEEEE-eCCceeEEecCCCc
Confidence 777777777765665533 2666776655432211112345888888888876554 45678888876643
No 406
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=90.49 E-value=0.026 Score=58.68 Aligned_cols=48 Identities=19% Similarity=0.123 Sum_probs=31.6
Q ss_pred hhhHHHhHccCCCcceE-EEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 532 TATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 532 ~~~~~~i~~~~~~~~~~-~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.+.+..++..-+..++. ++|||+||..++..+.+.|+ +++.++..+|.
T Consensus 140 ~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 188 (377)
T 2b61_A 140 VKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD---FMDNIVNLCSS 188 (377)
T ss_dssp HHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCC
T ss_pred HHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCch---hhheeEEeccC
Confidence 33444455544557887 99999999988776665544 45666666554
No 407
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP: c.69.1.16
Probab=90.46 E-value=0.091 Score=51.57 Aligned_cols=52 Identities=19% Similarity=0.287 Sum_probs=41.2
Q ss_pred cchHHHHHHHHh------hCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILN------QTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~------~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
.|+.+.++++.. ..+..+++++|||+|+.+++.++..+|+ ++.+++++|...
T Consensus 101 ~d~~~~~~~l~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~----v~~~v~~~p~~~ 158 (262)
T 1jfr_A 101 RQLLSALDYLTQRSSVRTRVDATRLGVMGHSMGGGGSLEAAKSRTS----LKAAIPLTGWNT 158 (262)
T ss_dssp HHHHHHHHHHHHTSTTGGGEEEEEEEEEEETHHHHHHHHHHHHCTT----CSEEEEESCCCS
T ss_pred HHHHHHHHHHHhccccccccCcccEEEEEEChhHHHHHHHHhcCcc----ceEEEeecccCc
Confidence 366778888876 3345689999999999999998888776 678888888754
No 408
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=90.40 E-value=0.048 Score=54.38 Aligned_cols=37 Identities=16% Similarity=0.294 Sum_probs=25.7
Q ss_pred CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+..++.++|||+||..++....+.|+ +++.++..+|.
T Consensus 94 ~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~ 130 (309)
T 3u1t_A 94 GLDDMVLVIHDWGSVIGMRHARLNPD---RVAAVAFMEAL 130 (309)
T ss_dssp TCCSEEEEEEEHHHHHHHHHHHHCTT---TEEEEEEEEES
T ss_pred CCCceEEEEeCcHHHHHHHHHHhChH---hheEEEEeccC
Confidence 45789999999999887766654443 45555555543
No 409
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A {Burkholderia SP} PDB: 1y37_A
Probab=89.75 E-value=0.053 Score=53.92 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=28.1
Q ss_pred CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
+..++.++|||+||..++....+.| ++++.++..+|..
T Consensus 94 ~~~~~~lvG~S~Gg~ia~~~a~~~p---~~v~~lvl~~~~~ 131 (304)
T 3b12_A 94 GFERFHLVGHARGGRTGHRMALDHP---DSVLSLAVLDIIP 131 (304)
Confidence 3468999999999998887766554 3577777766653
No 410
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=90.25 E-value=0.073 Score=53.74 Aligned_cols=41 Identities=27% Similarity=0.350 Sum_probs=27.2
Q ss_pred HhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108 537 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA 580 (703)
Q Consensus 537 ~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (703)
.++..-+.+++.++|||+||..++....+.|+ +++.++..+
T Consensus 97 ~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~ 137 (317)
T 1wm1_A 97 RLREMAGVEQWLVFGGSWGSTLALAYAQTHPE---RVSEMVLRG 137 (317)
T ss_dssp HHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEES
T ss_pred HHHHHcCCCcEEEEEeCHHHHHHHHHHHHCCh---heeeeeEec
Confidence 34444456789999999999987766665554 455555443
No 411
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=90.23 E-value=1.8 Score=43.39 Aligned_cols=191 Identities=8% Similarity=-0.010 Sum_probs=91.7
Q ss_pred CCCEEEEEeCC----CcEEEEEcCCCceeEEEecCC--CcEEEEEEecCCCEEEEEEC----C-----CeEEEEEcCCCc
Q psy7108 60 SSTGMVSASWD----KTVKLWNAVETDTQHETIQLL--SDALCVAYKPDGTEIVVATL----D-----GQLIMFDVESAA 124 (703)
Q Consensus 60 dg~~L~sgs~D----g~V~iWd~~~~~~~~~~~~~~--~~V~~v~~spdg~~las~s~----d-----g~I~vwd~~~~~ 124 (703)
++.+++.|+.+ ..+.++|..+..- ....... ..-.+++ ..+++.++.|+. + ..+.+||..+.+
T Consensus 24 ~~~i~v~GG~~~~~~~~~~~~d~~~~~W-~~~~~~p~~r~~~~~~-~~~~~lyv~GG~~~~~~~~~~~~~~~~~d~~~~~ 101 (308)
T 1zgk_A 24 GRLIYTAGGYFRQSLSYLEAYNPSNGTW-LRLADLQVPRSGLAGC-VVGGLLYAVGGRNNSPDGNTDSSALDCYNPMTNQ 101 (308)
T ss_dssp CCCEEEECCBSSSBCCCEEEEETTTTEE-EECCCCSSCCBSCEEE-EETTEEEEECCEEEETTEEEECCCEEEEETTTTE
T ss_pred CCEEEEEeCcCCCCcceEEEEcCCCCeE-eECCCCCcccccceEE-EECCEEEEECCCcCCCCCCeecceEEEECCCCCe
Confidence 45677777642 3578888876632 1111111 1111222 225667777665 2 358888887765
Q ss_pred EEEEEeccccCCCCCCCCccchhhcccCCccEEEEEEcCCCCEEEEEecC-----CcEEEEECCCCceEEEEEeccCCcc
Q psy7108 125 QVGSVEARRDLDSGRLDTDLVTREQSLKAKAVSTVCYSADGSCILAAGQS-----KYICIYSSREGILLKKFTITQNKSL 199 (703)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~i~~spdg~~l~s~s~d-----g~I~lwD~~~~~~~~~~~~~~~~~~ 199 (703)
-... . ..... ......+.+ +++.++.|+.+ ..+.+||+.+.+-...-..+.. .
T Consensus 102 W~~~-~---~~p~~--------------r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~~W~~~~~~p~~--r 159 (308)
T 1zgk_A 102 WSPC-A---PMSVP--------------RNRIGVGVI--DGHIYAVGGSHGCIHHNSVERYEPERDEWHLVAPMLTR--R 159 (308)
T ss_dssp EEEC-C---CCSSC--------------CBTCEEEEE--TTEEEEECCEETTEECCCEEEEETTTTEEEECCCCSSC--C
T ss_pred EeEC-C---CCCcC--------------ccccEEEEE--CCEEEEEcCCCCCcccccEEEECCCCCeEeECCCCCcc--c
Confidence 3221 1 00000 011222223 56666766543 4688999987754322111111 1
Q ss_pred ccccccceeeeeccCCCEEEEEcccCCCCCeeEEECCCCCCCcc--ceeecCCccceEEEEEcCCCCEEEEEeCC-----
Q psy7108 200 DGINDFINRRKMTEFGNVSLIETRETHEGGNVVLKLPGVKKGDM--AARVLKPEVRVFCVKFSPTGQAWVAATTE----- 272 (703)
Q Consensus 200 ~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~i~iwd~~~~~~--~~~~~~h~~~V~~l~~spdg~~l~s~s~D----- 272 (703)
.+ .+++ .-+++.+++++.++. .....+..||..+.+- +............+.+ +++.++.|+.+
T Consensus 160 ~~-----~~~~-~~~~~iyv~GG~~~~-~~~~~~~~yd~~~~~W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~ 230 (308)
T 1zgk_A 160 IG-----VGVA-VLNRLLYAVGGFDGT-NRLNSAECYYPERNEWRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQL 230 (308)
T ss_dssp BS-----CEEE-EETTEEEEECCBCSS-CBCCCEEEEETTTTEEEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBC
T ss_pred cc-----eEEE-EECCEEEEEeCCCCC-CcCceEEEEeCCCCeEeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCcc
Confidence 11 1111 225666666654432 2134577788766532 2111111222222333 56666777653
Q ss_pred C-EEEEEcCCCc
Q psy7108 273 G-VHIYSLDSGY 283 (703)
Q Consensus 273 g-v~iwd~~~~~ 283 (703)
. +.+||..+.+
T Consensus 231 ~~v~~yd~~~~~ 242 (308)
T 1zgk_A 231 NSVERYDVETET 242 (308)
T ss_dssp CCEEEEETTTTE
T ss_pred ceEEEEeCCCCc
Confidence 2 7889887654
No 412
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure initiative, PSI-2, structural midwest center for structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus anthracis}
Probab=90.23 E-value=0.33 Score=47.08 Aligned_cols=49 Identities=18% Similarity=0.100 Sum_probs=38.9
Q ss_pred HHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 615 ATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 615 a~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
+.+..+++..+.++++++|||+|+.+++.++..+|+ +++.+++++|...
T Consensus 79 ~~~~~~~~~l~~~~~~lvG~S~Gg~~a~~~a~~~p~---~v~~~vl~~~~~~ 127 (278)
T 3oos_A 79 KDLEAIREALYINKWGFAGHSAGGMLALVYATEAQE---SLTKIIVGGAAAS 127 (278)
T ss_dssp HHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHHGG---GEEEEEEESCCSB
T ss_pred HHHHHHHHHhCCCeEEEEeecccHHHHHHHHHhCch---hhCeEEEecCccc
Confidence 344445556677789999999999999998887664 5888999998876
No 413
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=90.18 E-value=0.12 Score=51.91 Aligned_cols=49 Identities=16% Similarity=0.307 Sum_probs=38.3
Q ss_pred hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
+.+.+..++...+..++++||||+|+.++..++...|+ +|+.++.++|.
T Consensus 60 ~~~~i~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p~---~v~~lv~i~~p 108 (285)
T 1ex9_A 60 LLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPD---LIASATSVGAP 108 (285)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEETTHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChh---heeEEEEECCC
Confidence 34555666666677789999999999999988887665 67888888873
No 414
>1w52_X Pancreatic lipase related protein 2; detergent, cleaved flap; HET: DDQ; 2.99A {Equus caballus}
Probab=90.08 E-value=0.097 Score=56.35 Aligned_cols=52 Identities=21% Similarity=0.210 Sum_probs=42.3
Q ss_pred cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
-|+-++++++.+..+ .+++++||||+|+.++..++...|+ +|+.++++.|+.
T Consensus 128 ~dl~~~i~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~---~v~~iv~ldpa~ 181 (452)
T 1w52_X 128 AETAYLIQQLLTELSYNPENVHIIGHSLGAHTAGEAGRRLEG---RVGRVTGLDPAE 181 (452)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTT---CSSEEEEESCBC
T ss_pred HHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhccc---ceeeEEeccccc
Confidence 367778888876655 6789999999999999888877664 588899998875
No 415
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase, decarboxylase, sulfate elimination, terminal alkene production; 1.68A {Lyngbya majuscula 19L}
Probab=90.03 E-value=0.25 Score=48.08 Aligned_cols=55 Identities=24% Similarity=0.336 Sum_probs=42.2
Q ss_pred HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccCCCC
Q psy7108 614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLGNLV 671 (703)
Q Consensus 614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~~~~ 671 (703)
-+.+..++...+..+++++|||+|+.+++.++..+|+ +++.+++++|........
T Consensus 82 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~~~~~ 136 (286)
T 3qit_A 82 LAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPK---KIKELILVELPLPAEESK 136 (286)
T ss_dssp HHHHHHHHHHSCSSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCCCCCC--
T ss_pred HHHHHHHHHhcCCCCEEEEEeCHHHHHHHHHHHhChh---hccEEEEecCCCCCcccc
Confidence 3455556666677889999999999999999988765 588899999887655443
No 416
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like hydrolase, structural genomi center for structural genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm 1728}
Probab=90.00 E-value=0.16 Score=47.27 Aligned_cols=50 Identities=20% Similarity=0.205 Sum_probs=38.9
Q ss_pred hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
+-+.+..+++..+..++.++|||+|+.+++.++...|+ +++.+++++|..
T Consensus 86 ~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~~v~~~~~~ 135 (207)
T 3bdi_A 86 AAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPD---IVDGIIAVAPAW 135 (207)
T ss_dssp HHHHHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCS
T ss_pred HHHHHHHHHHHcCCCceEEEEECccHHHHHHHHHhCch---hheEEEEeCCcc
Confidence 33455666666777899999999999999988887664 577888888763
No 417
>3f67_A Putative dienelactone hydrolase; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; 1.74A {Klebsiella pneumoniae subsp}
Probab=89.99 E-value=0.058 Score=51.84 Aligned_cols=80 Identities=15% Similarity=0.107 Sum_probs=0.0
Q ss_pred chhhhhhcccccccceeecccCccccccCcc--------cCcCCccceeeeecccchhhhhhhhcCCcccccccccccCC
Q psy7108 415 PPTLFARMRTRGYDIWLWNARGNVYSREHVN--------LTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETG 486 (703)
Q Consensus 415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 486 (703)
++-.++. +||.|...|.||..-+..... +......
T Consensus 51 ~~~~l~~---~G~~v~~~d~~g~g~~~~~~~~~~~~~~~~~~~~~~---------------------------------- 93 (241)
T 3f67_A 51 LCRRLAQ---EGYLAIAPELYFRQGDPNEYHDIPTLFKELVSKVPD---------------------------------- 93 (241)
T ss_dssp HHHHHHH---TTCEEEEECTTTTTCCGGGCCSHHHHHHHTGGGSCH----------------------------------
T ss_pred HHHHHHH---CCcEEEEecccccCCCCCchhhHHHHHHHhhhcCCc----------------------------------
Q ss_pred CCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCC-CcceEEEEEecCceeeeeccCC
Q psy7108 487 SSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSL 565 (703)
Q Consensus 487 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~-~~~~~~~g~S~G~~~~~~~~~~ 565 (703)
+....|+.++++|+..... ..+++++|||+||..++....+
T Consensus 94 --------------------------------------~~~~~d~~~~~~~l~~~~~d~~~i~l~G~S~Gg~~a~~~a~~ 135 (241)
T 3f67_A 94 --------------------------------------AQVLADLDHVASWAARHGGDAHRLLITGFCWGGRITWLYAAH 135 (241)
T ss_dssp --------------------------------------HHHHHHHHHHHHHHHTTTEEEEEEEEEEETHHHHHHHHHHTT
T ss_pred --------------------------------------hhhHHHHHHHHHHHHhccCCCCeEEEEEEcccHHHHHHHHhh
Q ss_pred Cchh
Q psy7108 566 RPEY 569 (703)
Q Consensus 566 ~~~~ 569 (703)
.|.+
T Consensus 136 ~~~~ 139 (241)
T 3f67_A 136 NPQL 139 (241)
T ss_dssp CTTC
T ss_pred CcCc
No 418
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural genomics, joint CEN structural genomics, JCSG; HET: PG4 UNL; 1.85A {Sulfolobus solfataricus P2}
Probab=89.99 E-value=0.15 Score=52.41 Aligned_cols=59 Identities=17% Similarity=0.205 Sum_probs=46.6
Q ss_pred eeeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCC-chHHHHHHHheeccccc
Q psy7108 603 LNIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR-PEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 603 ~s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~-~~~~~~i~~~~~l~p~~ 665 (703)
+++++++ -|+.+.++++....+..+++++|||+|+.+++.++..+ | +.++.++++++..
T Consensus 121 ~~~~~~~-~d~~~~~~~l~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~p---~~v~~lvl~~~~~ 180 (354)
T 2rau_A 121 WGWSTWI-SDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWK---NDIKGLILLDGGP 180 (354)
T ss_dssp CSHHHHH-HHHHHHHHHHHHHHCCSSEEEEEETHHHHHHHHHHHHHHH---HHEEEEEEESCSC
T ss_pred CcHHHHH-HHHHHHHHHHHHhcCCceEEEEEECHhHHHHHHHHHhcCc---cccceEEEecccc
Confidence 4455555 48899999988877778899999999999998888764 4 4788888886544
No 419
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism, detoxification, magnesium, metal-binding, peroxisome; HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P* 1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A* 4hai_A* 1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Probab=89.91 E-value=0.058 Score=59.19 Aligned_cols=37 Identities=24% Similarity=0.348 Sum_probs=25.8
Q ss_pred CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+..++.++|||+||..++..+.+.|+ +++..+..+|+
T Consensus 325 ~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 361 (555)
T 3i28_A 325 GLSQAVFIGHDWGGMLVWYMALFYPE---RVRAVASLNTP 361 (555)
T ss_dssp TCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred CCCcEEEEEecHHHHHHHHHHHhChH---heeEEEEEccC
Confidence 45689999999999888776665543 45555555443
No 420
>2r8b_A AGR_C_4453P, uncharacterized protein ATU2452; APC6088, agrobacterium tumefaciens STR. C58 structural genomics, PSI-2; 2.56A {Agrobacterium tumefaciens str} SCOP: c.69.1.14
Probab=89.91 E-value=0.13 Score=49.88 Aligned_cols=54 Identities=19% Similarity=0.054 Sum_probs=42.1
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
.|+.+.++++.+..+..++.++|||+|+.+++.++..+|+ +++.+++++|....
T Consensus 125 ~~~~~~l~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~p~---~v~~~v~~~~~~~~ 178 (251)
T 2r8b_A 125 GKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPE---LFDAAVLMHPLIPF 178 (251)
T ss_dssp HHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHhccCCCcEEEEEECHHHHHHHHHHHhCCc---ccCeEEEEecCCCc
Confidence 4556677777665567789999999999999988877665 57888888887644
No 421
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=89.69 E-value=0.053 Score=53.15 Aligned_cols=43 Identities=19% Similarity=0.166 Sum_probs=29.6
Q ss_pred hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
+++.-+..++.++|||+||..++....+ +.++++.++..+|..
T Consensus 91 ~~~~~~~~~~~lvG~S~Gg~~a~~~a~~---~p~~v~~lvl~~~~~ 133 (282)
T 3qvm_A 91 ILVALDLVNVSIIGHSVSSIIAGIASTH---VGDRISDITMICPSP 133 (282)
T ss_dssp HHHHTTCCSEEEEEETHHHHHHHHHHHH---HGGGEEEEEEESCCS
T ss_pred HHHHcCCCceEEEEecccHHHHHHHHHh---CchhhheEEEecCcc
Confidence 3333355789999999999877765543 344677777777654
No 422
>1zi8_A Carboxymethylenebutenolidase; alpha and beta proteins, 3-D structure, serine esterase, HYD aromatic hydrocarbons, catabolism; 1.40A {Pseudomonas putida} PDB: 1zj5_A* 1zi9_A 1zi6_A 1zj4_A* 1din_A 1ziy_A* 1zic_A 1zix_A 1ggv_A*
Probab=89.68 E-value=0.13 Score=49.23 Aligned_cols=51 Identities=24% Similarity=0.180 Sum_probs=40.4
Q ss_pred ecchHHHHHHHHhhCC-CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 610 LYDTTATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 610 ~~d~pa~i~~i~~~t~-~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.-|+.+.++++....+ ..++.++|||+|+.+++.++...| ++..+.+.|..
T Consensus 97 ~~d~~~~~~~l~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~-----~~~~v~~~~~~ 148 (236)
T 1zi8_A 97 VGDLEAAIRYARHQPYSNGKVGLVGYSLGGALAFLVASKGY-----VDRAVGYYGVG 148 (236)
T ss_dssp HHHHHHHHHHHTSSTTEEEEEEEEEETHHHHHHHHHHHHTC-----SSEEEEESCSS
T ss_pred hHHHHHHHHHHHhccCCCCCEEEEEECcCHHHHHHHhccCC-----ccEEEEecCcc
Confidence 3678899999887654 468999999999999999888777 66666666654
No 423
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain, catalytic triad (A His272, Glu130), mutant, I135F, haloalkanes; 0.95A {Rhodococcus SP} SCOP: c.69.1.8 PDB: 3fwh_A 3fbw_A 3rlt_A 3rk4_A 1bn6_A 1bn7_A 4fwb_A 1cqw_A 3sk0_A 2v9z_A
Probab=89.63 E-value=0.061 Score=53.40 Aligned_cols=66 Identities=14% Similarity=0.054 Sum_probs=0.0
Q ss_pred cccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCcccceeecc
Q psy7108 424 TRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKDDETEIRVL 503 (703)
Q Consensus 424 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 503 (703)
.+||.|+..|.||...|.....
T Consensus 56 ~~~~~v~~~d~~G~G~s~~~~~---------------------------------------------------------- 77 (299)
T 3g9x_A 56 APSHRCIAPDLIGMGKSDKPDL---------------------------------------------------------- 77 (299)
T ss_dssp TTTSCEEEECCTTSTTSCCCCC----------------------------------------------------------
T ss_pred ccCCEEEeeCCCCCCCCCCCCC----------------------------------------------------------
Q ss_pred cCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108 504 DEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 504 ~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
...+.+..+.+..++..-+..++.++|||+||..++..+.+.|+
T Consensus 78 ---------------------~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p~ 121 (299)
T 3g9x_A 78 ---------------------DYFFDDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPE 121 (299)
T ss_dssp ---------------------CCCHHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHHHHHSGG
T ss_pred ---------------------cccHHHHHHHHHHHHHHhCCCcEEEEEeCccHHHHHHHHHhcch
No 424
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=89.61 E-value=0.066 Score=53.97 Aligned_cols=40 Identities=25% Similarity=0.309 Sum_probs=26.6
Q ss_pred hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108 538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA 580 (703)
Q Consensus 538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (703)
++..-+..++.++|||+||..++....+.|+ +++.++..+
T Consensus 95 l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lvl~~ 134 (313)
T 1azw_A 95 LRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ---QVTELVLRG 134 (313)
T ss_dssp HHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEES
T ss_pred HHHHhCCCceEEEEECHHHHHHHHHHHhChh---heeEEEEec
Confidence 3444456789999999999987776665553 444444443
No 425
>1fj2_A Protein (acyl protein thioesterase 1); alpha/beta hydrolase, serine hydrolase, SAD, anomalous diffr hydrolase; 1.50A {Homo sapiens} SCOP: c.69.1.14
Probab=89.52 E-value=0.2 Score=47.63 Aligned_cols=52 Identities=21% Similarity=0.095 Sum_probs=39.4
Q ss_pred cchHHHHHHHHhhCCC--CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTGH--NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~--~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-|+.+.++++.+ .+. .+++++|||+|+.+++.++..+|+ +++.+++++|...
T Consensus 96 ~~~~~~i~~~~~-~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~i~~~~~~~ 149 (232)
T 1fj2_A 96 ENIKALIDQEVK-NGIPSNRIILGGFSQGGALSLYTALTTQQ---KLAGVTALSCWLP 149 (232)
T ss_dssp HHHHHHHHHHHH-TTCCGGGEEEEEETHHHHHHHHHHTTCSS---CCSEEEEESCCCT
T ss_pred HHHHHHHHHHhc-CCCCcCCEEEEEECHHHHHHHHHHHhCCC---ceeEEEEeecCCC
Confidence 345667777655 443 689999999999999999888765 4677888887653
No 426
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1 interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Probab=89.48 E-value=0.14 Score=47.98 Aligned_cols=43 Identities=12% Similarity=-0.038 Sum_probs=28.3
Q ss_pred HhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 537 YILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 537 ~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.++..-+..++.++|||+||..++....+.| ++++..+..+|.
T Consensus 95 ~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~~---~~v~~~v~~~~~ 137 (210)
T 1imj_A 95 AVVDALELGPPVVISPSLSGMYSLPFLTAPG---SQLPGFVPVAPI 137 (210)
T ss_dssp HHHHHHTCCSCEEEEEGGGHHHHHHHHTSTT---CCCSEEEEESCS
T ss_pred HHHHHhCCCCeEEEEECchHHHHHHHHHhCc---cccceEEEeCCC
Confidence 3333334578999999999988776555443 346666666654
No 427
>2vat_A Acetyl-COA--deacetylcephalosporin C acetyltransferase; A/B- hydrolase fold, acyltransferase, acetyl coenzyme A, antibiotic biosynthesis; HET: COA; 2.2A {Acremonium chrysogenum} SCOP: c.69.1.40 PDB: 2vav_A* 2vax_A*
Probab=89.47 E-value=0.13 Score=55.04 Aligned_cols=50 Identities=26% Similarity=0.230 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCCc-eEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 615 ATIDYILNQTGHNS-LITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 615 a~i~~i~~~t~~~~-~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
+.+..++...+.++ +++||||+|+++++.++..+|+ +|+.+++++|....
T Consensus 187 ~dl~~ll~~l~~~~~~~lvGhSmGG~ial~~A~~~p~---~v~~lVli~~~~~~ 237 (444)
T 2vat_A 187 RIHRQVLDRLGVRQIAAVVGASMGGMHTLEWAFFGPE---YVRKIVPIATSCRQ 237 (444)
T ss_dssp HHHHHHHHHHTCCCEEEEEEETHHHHHHHHHGGGCTT---TBCCEEEESCCSBC
T ss_pred HHHHHHHHhcCCccceEEEEECHHHHHHHHHHHhChH---hhheEEEEeccccC
Confidence 44445555566677 8999999999999999988776 57888888887653
No 428
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Probab=89.46 E-value=0.17 Score=49.75 Aligned_cols=43 Identities=19% Similarity=0.104 Sum_probs=34.7
Q ss_pred HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
++.-+.++++++|||+|+.+++.++..+|+ +|+.+++++|...
T Consensus 77 l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~~~~ 119 (269)
T 2xmz_A 77 LDKYKDKSITLFGYSMGGRVALYYAINGHI---PISNLILESTSPG 119 (269)
T ss_dssp HGGGTTSEEEEEEETHHHHHHHHHHHHCSS---CCSEEEEESCCSC
T ss_pred HHHcCCCcEEEEEECchHHHHHHHHHhCch---heeeeEEEcCCcc
Confidence 444466789999999999999999988776 5788888887543
No 429
>3bdv_A Uncharacterized protein DUF1234; DUF1234 family protein, alpha/beta-hydrolases fold, structur genomics; HET: MSE; 1.66A {Pectobacterium atrosepticum SCRI1043}
Probab=89.44 E-value=0.18 Score=46.58 Aligned_cols=46 Identities=20% Similarity=0.162 Sum_probs=35.0
Q ss_pred HHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 618 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 618 ~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
..+++..+ .+++++|||+|+.+++.++..+|+ +++.+++++|....
T Consensus 66 ~~~~~~~~-~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 111 (191)
T 3bdv_A 66 RRELSVCT-QPVILIGHSFGALAACHVVQQGQE---GIAGVMLVAPAEPM 111 (191)
T ss_dssp HHHHHTCS-SCEEEEEETHHHHHHHHHHHTTCS---SEEEEEEESCCCGG
T ss_pred HHHHHhcC-CCeEEEEEChHHHHHHHHHHhcCC---CccEEEEECCCccc
Confidence 33344445 789999999999999999888664 57788888886543
No 430
>3bjr_A Putative carboxylesterase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.09A {Lactobacillus plantarum WCFS1}
Probab=89.37 E-value=0.025 Score=56.45 Aligned_cols=85 Identities=13% Similarity=0.077 Sum_probs=0.0
Q ss_pred hhhhhhcccccccceeecccCcccc--ccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCC
Q psy7108 416 PTLFARMRTRGYDIWLWNARGNVYS--REHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESS 493 (703)
Q Consensus 416 ~~~la~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 493 (703)
..++..+.++||.|...|.||...+ ..
T Consensus 70 ~~~~~~l~~~G~~v~~~d~~g~~~~~~~~--------------------------------------------------- 98 (283)
T 3bjr_A 70 ESLAMAFAGHGYQAFYLEYTLLTDQQPLG--------------------------------------------------- 98 (283)
T ss_dssp HHHHHHHHTTTCEEEEEECCCTTTCSSCB---------------------------------------------------
T ss_pred HHHHHHHHhCCcEEEEEeccCCCccccCc---------------------------------------------------
Q ss_pred CcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHc-----cCCCcceEEEEEecCceeeeeccCCCch
Q psy7108 494 KDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILN-----QTGHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~-----~~~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
.....|+.++++|+.+ .-..++++++|||+||..++..+.+.++
T Consensus 99 -------------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~ 147 (283)
T 3bjr_A 99 -------------------------------LAPVLDLGRAVNLLRQHAAEWHIDPQQITPAGFSVGGHIVALYNDYWAT 147 (283)
T ss_dssp -------------------------------THHHHHHHHHHHHHHHSHHHHTEEEEEEEEEEETHHHHHHHHHHHHTTT
T ss_pred -------------------------------hhHHHHHHHHHHHHHHHHHHhCCCcccEEEEEECHHHHHHHHHHhhccc
Q ss_pred h----------hhhHHHhhhhhhh
Q psy7108 569 Y----------QTKVRLNVLWAQS 582 (703)
Q Consensus 569 ~----------~~~~~~~~~~~p~ 582 (703)
. ..+++..+..+|.
T Consensus 148 ~~~~~~~~~~~~~~~~~~v~~~p~ 171 (283)
T 3bjr_A 148 RVATELNVTPAMLKPNNVVLGYPV 171 (283)
T ss_dssp HHHHHHTCCHHHHCCSSEEEESCC
T ss_pred cchhhcCCCcCCCCccEEEEcCCc
No 431
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET: PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB: 1qtr_A* 1x2b_A* 1x2e_A*
Probab=89.37 E-value=0.18 Score=50.80 Aligned_cols=46 Identities=26% Similarity=0.327 Sum_probs=35.4
Q ss_pred HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
.+..++...+.+++++||||+|+.+++.++..+|+ +|+.+|+++|.
T Consensus 94 dl~~l~~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 139 (317)
T 1wm1_A 94 DIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPE---RVSEMVLRGIF 139 (317)
T ss_dssp HHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred HHHHHHHHcCCCcEEEEEeCHHHHHHHHHHHHCCh---heeeeeEeccC
Confidence 34445556677789999999999999999888775 56777777654
No 432
>1bu8_A Protein (pancreatic lipase related protein 2); hydrolase, lipid degradation; HET: NAG; 1.80A {Rattus norvegicus} SCOP: b.12.1.2 c.69.1.19 PDB: 2oxe_A* 2pvs_A 1eth_A*
Probab=89.37 E-value=0.13 Score=55.32 Aligned_cols=52 Identities=19% Similarity=0.174 Sum_probs=42.1
Q ss_pred cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
-|+-++++++.+..+ .+++++||||+|+.++..++...|+ +|+.++++.|+.
T Consensus 128 ~dl~~li~~L~~~~g~~~~~i~LvGhSlGg~vA~~~a~~~p~---~v~~iv~ldpa~ 181 (452)
T 1bu8_A 128 AEIAFLVQVLSTEMGYSPENVHLIGHSLGAHVVGEAGRRLEG---HVGRITGLDPAE 181 (452)
T ss_dssp HHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHHTTT---CSSEEEEESCBC
T ss_pred HHHHHHHHHHHHhcCCCccceEEEEEChhHHHHHHHHHhccc---ccceEEEecCCc
Confidence 367778888876555 3789999999999999988887664 588899998875
No 433
>4ao6_A Esterase; hydrolase, thermo label; 1.60A {Unidentified} PDB: 4ao7_A 4ao8_A
Probab=89.31 E-value=0.021 Score=56.45 Aligned_cols=43 Identities=23% Similarity=0.187 Sum_probs=32.0
Q ss_pred cccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108 526 LGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 526 ~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
..+.|..++++++.......+++++|+|+||+.++......|.
T Consensus 129 ~~~~d~~a~l~~l~~~~d~~rv~~~G~S~GG~~a~~~a~~~pr 171 (259)
T 4ao6_A 129 AVIADWAAALDFIEAEEGPRPTGWWGLSMGTMMGLPVTASDKR 171 (259)
T ss_dssp HHHHHHHHHHHHHHHHHCCCCEEEEECTHHHHHHHHHHHHCTT
T ss_pred HHHHHHHHHHHHhhhccCCceEEEEeechhHHHHHHHHhcCCc
Confidence 3345677788888776677899999999999877665554443
No 434
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=89.30 E-value=0.056 Score=51.75 Aligned_cols=36 Identities=28% Similarity=0.270 Sum_probs=27.9
Q ss_pred ceEEEEEecCceeeeeccCC-CchhhhhHHHhhhhhhhhhc
Q psy7108 546 SLITLGHSLGTTNVLIAGSL-RPEYQTKVRLNVLWAQSAFL 585 (703)
Q Consensus 546 ~~~~~g~S~G~~~~~~~~~~-~~~~~~~~~~~~~~~p~~~~ 585 (703)
++.++|||+||..++....+ .|+ ++..+..+|....
T Consensus 85 ~~~l~G~S~Gg~~a~~~a~~~~p~----v~~lvl~~~~~~~ 121 (245)
T 3e0x_A 85 NITLIGYSMGGAIVLGVALKKLPN----VRKVVSLSGGARF 121 (245)
T ss_dssp CEEEEEETHHHHHHHHHHTTTCTT----EEEEEEESCCSBC
T ss_pred ceEEEEeChhHHHHHHHHHHhCcc----ccEEEEecCCCcc
Confidence 99999999999988877776 665 6677777765444
No 435
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha sandwich, PSI, protein structure initiative; 1.50A {Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A 3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Probab=89.28 E-value=0.062 Score=54.06 Aligned_cols=77 Identities=18% Similarity=0.226 Sum_probs=0.0
Q ss_pred hhhcccccccceeecccCccccccC-------------cccCcCCccceeeeecccchhhhhhhhcCCcccccccccccC
Q psy7108 419 FARMRTRGYDIWLWNARGNVYSREH-------------VNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMET 485 (703)
Q Consensus 419 la~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 485 (703)
++. +||.|...|.||...+... ..+.....-++
T Consensus 105 l~~---~g~~v~~~d~rg~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~------------------------------- 150 (318)
T 1l7a_A 105 WAL---HGYATFGMLVRGQQRSEDTSISPHGHALGWMTKGILDKDTYYY------------------------------- 150 (318)
T ss_dssp HHH---TTCEEEEECCTTTSSSCCCCCCSSCCSSSSTTTTTTCTTTCHH-------------------------------
T ss_pred hhh---CCcEEEEecCCCCCCCCCcccccCCccccceeccCCCHHHHHH-------------------------------
Q ss_pred CCCCCcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCC--cceEEEEEecCceeeeecc
Q psy7108 486 GSSDEESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGH--NSLITLGHSLGTTNVLIAG 563 (703)
Q Consensus 486 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~--~~~~~~g~S~G~~~~~~~~ 563 (703)
.....|+.++++|+.+..+. ++++++|||+||..++...
T Consensus 151 ---------------------------------------~~~~~D~~~~~~~l~~~~~~d~~~i~l~G~S~GG~~a~~~a 191 (318)
T 1l7a_A 151 ---------------------------------------RGVYLDAVRALEVISSFDEVDETRIGVTGGSQGGGLTIAAA 191 (318)
T ss_dssp ---------------------------------------HHHHHHHHHHHHHHHHSTTEEEEEEEEEEETHHHHHHHHHH
T ss_pred ---------------------------------------HHHHHHHHHHHHHHHhCCCcccceeEEEecChHHHHHHHHh
Q ss_pred CCCch
Q psy7108 564 SLRPE 568 (703)
Q Consensus 564 ~~~~~ 568 (703)
.+.|.
T Consensus 192 ~~~~~ 196 (318)
T 1l7a_A 192 ALSDI 196 (318)
T ss_dssp HHCSC
T ss_pred ccCCC
No 436
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=89.24 E-value=0.033 Score=57.62 Aligned_cols=46 Identities=20% Similarity=0.256 Sum_probs=30.0
Q ss_pred HHHhHccCCCcce-EEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhh
Q psy7108 535 IDYILNQTGHNSL-ITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 583 (703)
Q Consensus 535 ~~~i~~~~~~~~~-~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~ 583 (703)
+..++..-+.+++ .++|||+||..++....+.|+ +++.++..+|..
T Consensus 134 l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 180 (366)
T 2pl5_A 134 QKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN---SLSNCIVMASTA 180 (366)
T ss_dssp HHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCCS
T ss_pred HHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcH---hhhheeEeccCc
Confidence 3444444455788 799999999887766654443 566666666543
No 437
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=89.19 E-value=0.049 Score=54.95 Aligned_cols=37 Identities=32% Similarity=0.411 Sum_probs=26.4
Q ss_pred CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+..++.++|||+||..++.+..+.|+ +++..+..+|.
T Consensus 132 ~~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 168 (314)
T 3kxp_A 132 ARGHAILVGHSLGARNSVTAAAKYPD---LVRSVVAIDFT 168 (314)
T ss_dssp TSSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred CCCCcEEEEECchHHHHHHHHHhChh---heeEEEEeCCC
Confidence 45789999999999988776665443 55655655553
No 438
>3hxk_A Sugar hydrolase; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 3.20A {Lactococcus lactis subsp}
Probab=89.12 E-value=0.087 Score=52.04 Aligned_cols=78 Identities=17% Similarity=0.111 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD 489 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (703)
+.......+...+.++||.|...|.||...|. ....-
T Consensus 57 ~~~~~~~~~~~~l~~~G~~v~~~d~~g~g~s~------~~~~~------------------------------------- 93 (276)
T 3hxk_A 57 ISQRESDPLALAFLAQGYQVLLLNYTVMNKGT------NYNFL------------------------------------- 93 (276)
T ss_dssp CCGGGSHHHHHHHHHTTCEEEEEECCCTTSCC------CSCTH-------------------------------------
T ss_pred CCchhhHHHHHHHHHCCCEEEEecCccCCCcC------CCCcC-------------------------------------
Q ss_pred CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHcc-----CCCcceEEEEEecCceeeeeccC
Q psy7108 490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQ-----TGHNSLITLGHSLGTTNVLIAGS 564 (703)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~-----~~~~~~~~~g~S~G~~~~~~~~~ 564 (703)
...+.|+.++++|+... -...+++++|||+||..++..+.
T Consensus 94 -----------------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~ 138 (276)
T 3hxk_A 94 -----------------------------------SQNLEEVQAVFSLIHQNHKEWQINPEQVFLLGCSAGGHLAAWYGN 138 (276)
T ss_dssp -----------------------------------HHHHHHHHHHHHHHHHHTTTTTBCTTCCEEEEEHHHHHHHHHHSS
T ss_pred -----------------------------------chHHHHHHHHHHHHHHhHHHcCCCcceEEEEEeCHHHHHHHHHHh
Q ss_pred C
Q psy7108 565 L 565 (703)
Q Consensus 565 ~ 565 (703)
+
T Consensus 139 ~ 139 (276)
T 3hxk_A 139 S 139 (276)
T ss_dssp S
T ss_pred h
No 439
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=89.09 E-value=0.14 Score=50.29 Aligned_cols=40 Identities=15% Similarity=0.175 Sum_probs=30.1
Q ss_pred hCCCCceEEEEeChhHHHHHHHhcCC-chHHHHHHHheeccccc
Q psy7108 623 QTGHNSLITLGHSLGTTNVLIAGSLR-PEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 623 ~t~~~~~~~vg~s~g~~~~~~~~s~~-~~~~~~i~~~~~l~p~~ 665 (703)
.-+.++++++|||+|+.++..++..+ |+ +|+.+++++|+.
T Consensus 82 ~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~---~v~~lvl~~~~~ 122 (274)
T 1a8q_A 82 DLDLRDVTLVAHSMGGGELARYVGRHGTG---RLRSAVLLSAIP 122 (274)
T ss_dssp HTTCCSEEEEEETTHHHHHHHHHHHHCST---TEEEEEEESCCC
T ss_pred HcCCCceEEEEeCccHHHHHHHHHHhhhH---heeeeeEecCCC
Confidence 34556899999999999988766653 43 578888888653
No 440
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=88.99 E-value=0.083 Score=52.52 Aligned_cols=43 Identities=16% Similarity=0.135 Sum_probs=28.5
Q ss_pred HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
..++..-+.+++.++|||+||..++....+.| ++++.++..+|
T Consensus 95 ~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~ 137 (306)
T 3r40_A 95 IEAMEQLGHVHFALAGHNRGARVSYRLALDSP---GRLSKLAVLDI 137 (306)
T ss_dssp HHHHHHTTCSSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESC
T ss_pred HHHHHHhCCCCEEEEEecchHHHHHHHHHhCh---hhccEEEEecC
Confidence 33344445578999999999988777665544 35555555554
No 441
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Probab=88.96 E-value=0.024 Score=57.52 Aligned_cols=79 Identities=20% Similarity=0.351 Sum_probs=0.0
Q ss_pred hhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCCc
Q psy7108 416 PTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSKD 495 (703)
Q Consensus 416 ~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 495 (703)
..+...+.++||.|...|.||...+.
T Consensus 113 ~~~~~~la~~G~~vv~~d~~g~g~s~------------------------------------------------------ 138 (306)
T 3vis_A 113 AWLGERIASHGFVVIAIDTNTTLDQP------------------------------------------------------ 138 (306)
T ss_dssp HHHHHHHHTTTEEEEEECCSSTTCCH------------------------------------------------------
T ss_pred HHHHHHHHhCCCEEEEecCCCCCCCc------------------------------------------------------
Q ss_pred ccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHcc--------CCCcceEEEEEecCceeeeeccCCCc
Q psy7108 496 DETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQ--------TGHNSLITLGHSLGTTNVLIAGSLRP 567 (703)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~--------~~~~~~~~~g~S~G~~~~~~~~~~~~ 567 (703)
.....|+.++++|+... .+..+++++|||+||..++....+.|
T Consensus 139 -----------------------------~~~~~d~~~~~~~l~~~~~~~~~~~~~~~~v~l~G~S~GG~~a~~~a~~~p 189 (306)
T 3vis_A 139 -----------------------------DSRARQLNAALDYMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRP 189 (306)
T ss_dssp -----------------------------HHHHHHHHHHHHHHHHTSCHHHHTTEEEEEEEEEEETHHHHHHHHHHHHCT
T ss_pred -----------------------------chHHHHHHHHHHHHHhhcchhhhccCCcccEEEEEEChhHHHHHHHHhhCC
Q ss_pred hhhhhHHHhhhhhh
Q psy7108 568 EYQTKVRLNVLWAQ 581 (703)
Q Consensus 568 ~~~~~~~~~~~~~p 581 (703)
+ ++..+.++|
T Consensus 190 ~----v~~~v~~~~ 199 (306)
T 3vis_A 190 D----LKAAIPLTP 199 (306)
T ss_dssp T----CSEEEEESC
T ss_pred C----eeEEEEecc
No 442
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=88.96 E-value=0.037 Score=52.88 Aligned_cols=40 Identities=15% Similarity=-0.020 Sum_probs=30.3
Q ss_pred ccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108 527 GLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP 567 (703)
Q Consensus 527 g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~ 567 (703)
-..|+.++++++..... .++.++|||+||..++..+.+.|
T Consensus 88 ~~~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~ 127 (238)
T 1ufo_A 88 FKEEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGF 127 (238)
T ss_dssp HHHHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhcc
Confidence 34577778888875543 79999999999988777666555
No 443
>4fbl_A LIPS lipolytic enzyme; thermostable, structural genomics, enzyme function initiativ structural proteomics in europe, spine; HET: SPD; 1.99A {Unidentified} PDB: 4fbm_A
Probab=88.94 E-value=0.2 Score=49.88 Aligned_cols=52 Identities=17% Similarity=0.203 Sum_probs=40.9
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
-|+-+.++++.... ++++++|||+|+.+++.++..+|+ +|+.+++++|...+
T Consensus 106 ~d~~~~~~~l~~~~--~~v~lvG~S~GG~ia~~~a~~~p~---~v~~lvl~~~~~~~ 157 (281)
T 4fbl_A 106 ADIVAAMRWLEERC--DVLFMTGLSMGGALTVWAAGQFPE---RFAGIMPINAALRM 157 (281)
T ss_dssp HHHHHHHHHHHHHC--SEEEEEEETHHHHHHHHHHHHSTT---TCSEEEEESCCSCC
T ss_pred HHHHHHHHHHHhCC--CeEEEEEECcchHHHHHHHHhCch---hhhhhhcccchhcc
Confidence 46777888876543 579999999999999998888775 57778888887544
No 444
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease, xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP: c.69.1.7
Probab=88.87 E-value=0.2 Score=50.25 Aligned_cols=45 Identities=24% Similarity=0.276 Sum_probs=35.0
Q ss_pred HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
+..++..-+.++++++|||+|+++++.++..+|+ +|+.+++++|.
T Consensus 92 l~~l~~~l~~~~~~lvGhSmGg~ia~~~a~~~p~---~v~~lvl~~~~ 136 (313)
T 1azw_A 92 IERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQ---QVTELVLRGIF 136 (313)
T ss_dssp HHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred HHHHHHHhCCCceEEEEECHHHHHHHHHHHhChh---heeEEEEeccc
Confidence 4445566677789999999999999999888775 46677777654
No 445
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta hydrolase, PLP degradation, E-2- (acetamidomethylene)succinate; 2.26A {Mesorhizobium loti}
Probab=88.81 E-value=0.33 Score=48.64 Aligned_cols=46 Identities=28% Similarity=0.364 Sum_probs=35.1
Q ss_pred HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
+..+++..+..+++++|||+|+.+++.++..+|+ +++.+++++|..
T Consensus 124 l~~~l~~l~~~~v~lvG~S~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 169 (314)
T 3kxp_A 124 IAGLIRTLARGHAILVGHSLGARNSVTAAAKYPD---LVRSVVAIDFTP 169 (314)
T ss_dssp HHHHHHHHTSSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCT
T ss_pred HHHHHHHhCCCCcEEEEECchHHHHHHHHHhChh---heeEEEEeCCCC
Confidence 3334444455789999999999999999888775 577888888765
No 446
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=88.80 E-value=0.066 Score=53.12 Aligned_cols=37 Identities=22% Similarity=0.129 Sum_probs=26.3
Q ss_pred CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+..++.++|||+||..++..+.+.| ++++.++..+|.
T Consensus 108 ~~~~~~lvGhS~Gg~ia~~~a~~~p---~~v~~lvl~~~~ 144 (293)
T 3hss_A 108 DIAPARVVGVSMGAFIAQELMVVAP---ELVSSAVLMATR 144 (293)
T ss_dssp TCCSEEEEEETHHHHHHHHHHHHCG---GGEEEEEEESCC
T ss_pred CCCcEEEEeeCccHHHHHHHHHHCh---HHHHhhheeccc
Confidence 4568999999999988776555443 356666666654
No 447
>1auo_A Carboxylesterase; hydrolase; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.14 PDB: 1aur_A*
Probab=88.76 E-value=0.25 Score=46.37 Aligned_cols=53 Identities=13% Similarity=-0.012 Sum_probs=38.2
Q ss_pred chHHHHHHHHhh-CCCCceEEEEeChhHHHHHHHhc-CCchHHHHHHHheeccccccc
Q psy7108 612 DTTATIDYILNQ-TGHNSLITLGHSLGTTNVLIAGS-LRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 612 d~pa~i~~i~~~-t~~~~~~~vg~s~g~~~~~~~~s-~~~~~~~~i~~~~~l~p~~~~ 667 (703)
|+.+.++++.+. ....++.++|||+|+.+++.++. .+|+ +++.+++++|....
T Consensus 90 ~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~~---~~~~~v~~~~~~~~ 144 (218)
T 1auo_A 90 MVTDLIEAQKRTGIDASRIFLAGFSQGGAVVFHTAFINWQG---PLGGVIALSTYAPT 144 (218)
T ss_dssp HHHHHHHHHHHTTCCGGGEEEEEETHHHHHHHHHHHTTCCS---CCCEEEEESCCCTT
T ss_pred HHHHHHHHHHHcCCCcccEEEEEECHHHHHHHHHHHhcCCC---CccEEEEECCCCCC
Confidence 344555655441 12358999999999999999888 7665 57788888887654
No 448
>3sty_A Methylketone synthase 1; alpha/beta hydrolase, decarboxylase, hydrolase; HET: DKA; 1.70A {Lycopersicon hirsutum F} PDB: 3stu_A* 3stt_A* 3stv_A* 3stw_A* 3stx_A*
Probab=88.67 E-value=0.11 Score=50.71 Aligned_cols=81 Identities=16% Similarity=0.178 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD 489 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (703)
+.......+...+.++||.|+..|.||...|... ...
T Consensus 23 ~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~------~~~------------------------------------- 59 (267)
T 3sty_A 23 HGAWCWYKIVALMRSSGHNVTALDLGASGINPKQ------ALQ------------------------------------- 59 (267)
T ss_dssp CCGGGGHHHHHHHHHTTCEEEEECCTTSTTCSCC------GGG-------------------------------------
T ss_pred CCcchHHHHHHHHHhcCCeEEEeccccCCCCCCc------CCc-------------------------------------
Q ss_pred CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC-CCcceEEEEEecCceeeeeccCCCch
Q psy7108 490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT-GHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~-~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
...+.+..+.+.-++..- ...++.++|||+||..++....+.|+
T Consensus 60 -----------------------------------~~~~~~~~~~~~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~ 104 (267)
T 3sty_A 60 -----------------------------------IPNFSDYLSPLMEFMASLPANEKIILVGHALGGLAISKAMETFPE 104 (267)
T ss_dssp -----------------------------------CCSHHHHHHHHHHHHHTSCTTSCEEEEEETTHHHHHHHHHHHSGG
T ss_pred -----------------------------------cCCHHHHHHHHHHHHHhcCCCCCEEEEEEcHHHHHHHHHHHhChh
No 449
>2pbl_A Putative esterase/lipase/thioesterase; alpha/beta-hydrolases fold, structural genomics, joint cente structural genomics, JCSG; 1.79A {Silicibacter SP} SCOP: c.69.1.2
Probab=88.67 E-value=0.19 Score=49.10 Aligned_cols=56 Identities=14% Similarity=0.094 Sum_probs=43.3
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCc---hHHHHHHHheeccccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP---EYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~---~~~~~i~~~~~l~p~~~~ 667 (703)
-|+-+.++++..... .+++++|||+|+.+++.++.... ....+++.+++++|+..+
T Consensus 114 ~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~~~~~~~~v~~~vl~~~~~~~ 172 (262)
T 2pbl_A 114 QQISQAVTAAAKEID-GPIVLAGHSAGGHLVARMLDPEVLPEAVGARIRNVVPISPLSDL 172 (262)
T ss_dssp HHHHHHHHHHHHHSC-SCEEEEEETHHHHHHHHTTCTTTSCHHHHTTEEEEEEESCCCCC
T ss_pred HHHHHHHHHHHHhcc-CCEEEEEECHHHHHHHHHhccccccccccccceEEEEecCccCc
Confidence 567788898887766 78999999999999998887741 113467888899987644
No 450
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A* 3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Probab=88.61 E-value=0.22 Score=49.56 Aligned_cols=43 Identities=12% Similarity=0.241 Sum_probs=35.5
Q ss_pred HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
+..-+.+++++||||+|+.+++.++..+|+ +|+.+++++|...
T Consensus 98 l~~l~~~~~~lvGhS~GG~va~~~A~~~p~---~v~~lvl~~~~~~ 140 (286)
T 2puj_A 98 MDALDIDRAHLVGNAMGGATALNFALEYPD---RIGKLILMGPGGL 140 (286)
T ss_dssp HHHTTCCCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSCC
T ss_pred HHHhCCCceEEEEECHHHHHHHHHHHhChH---hhheEEEECcccc
Confidence 444566789999999999999999988776 5788898888763
No 451
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=88.51 E-value=0.13 Score=49.83 Aligned_cols=42 Identities=26% Similarity=0.327 Sum_probs=28.4
Q ss_pred hHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 538 ILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 538 i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+++.-+.+++.++|||+||+.++....+.| ++++.++..+|.
T Consensus 83 ~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p---~~v~~lvl~~~~ 124 (269)
T 4dnp_A 83 ILDALGIDCCAYVGHSVSAMIGILASIRRP---ELFSKLILIGAS 124 (269)
T ss_dssp HHHHTTCCSEEEEEETHHHHHHHHHHHHCT---TTEEEEEEESCC
T ss_pred HHHhcCCCeEEEEccCHHHHHHHHHHHhCc---HhhceeEEeCCC
Confidence 333335568999999999987776555443 356666666654
No 452
>1gpl_A RP2 lipase; serine esterase, hydrolase, lipid degradation, pancreas, glycoprotein, chimeric; 2.01A {Cavia porcellus} SCOP: b.12.1.2 c.69.1.19 PDB: 1lpb_B* 1lpa_B* 1n8s_A
Probab=88.49 E-value=0.011 Score=63.38 Aligned_cols=56 Identities=14% Similarity=0.041 Sum_probs=40.6
Q ss_pred cccCCchhhHHHhHccCC--CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 526 LGLYDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 526 ~g~~d~~~~~~~i~~~~~--~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
....|+.+.++++.+..+ .+++.++|||+||.+++.++.+.| .++...+.++|+.-
T Consensus 125 ~~~~dl~~~i~~l~~~~g~~~~~i~lvGhSlGg~vA~~~a~~~p---~~v~~iv~l~pa~p 182 (432)
T 1gpl_A 125 VVGAEVAYLVQVLSTSLNYAPENVHIIGHSLGAHTAGEAGKRLN---GLVGRITGLDPAEP 182 (432)
T ss_dssp HHHHHHHHHHHHHHHHHCCCGGGEEEEEETHHHHHHHHHHHTTT---TCSSEEEEESCBCT
T ss_pred HHHHHHHHHHHHHHHhcCCCcccEEEEEeCHHHHHHHHHHHhcc---cccceeEEeccccc
Confidence 334678888999976544 689999999999988776665544 35666677776643
No 453
>2o2g_A Dienelactone hydrolase; YP_324580.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.92A {Anabaena variabilis}
Probab=88.48 E-value=0.21 Score=46.99 Aligned_cols=53 Identities=23% Similarity=0.262 Sum_probs=41.2
Q ss_pred cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-|+.+.++++..... ..++.++|||+|+.+++.++..+|+ .++.+++++|...
T Consensus 96 ~d~~~~i~~l~~~~~~~~~~i~l~G~S~Gg~~a~~~a~~~~~---~v~~~v~~~~~~~ 150 (223)
T 2o2g_A 96 SRLVGATDWLTHNPDTQHLKVGYFGASTGGGAALVAAAERPE---TVQAVVSRGGRPD 150 (223)
T ss_dssp HHHHHHHHHHHHCTTTTTSEEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCGG
T ss_pred HHHHHHHHHHHhCcCCCCCcEEEEEeCccHHHHHHHHHhCCC---ceEEEEEeCCCCC
Confidence 577889999877643 3489999999999999988887664 4677777777643
No 454
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=88.47 E-value=0.23 Score=50.26 Aligned_cols=48 Identities=8% Similarity=0.018 Sum_probs=36.8
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
.|+.+.++++. ..+..+++++|||+|+.+++.++.. | .++.++.++|+
T Consensus 91 ~D~~~~~~~l~-~~~~~~~~lvGhSmGG~iA~~~A~~-~----~v~~lvl~~~~ 138 (305)
T 1tht_A 91 NSLCTVYHWLQ-TKGTQNIGLIAASLSARVAYEVISD-L----ELSFLITAVGV 138 (305)
T ss_dssp HHHHHHHHHHH-HTTCCCEEEEEETHHHHHHHHHTTT-S----CCSEEEEESCC
T ss_pred HHHHHHHHHHH-hCCCCceEEEEECHHHHHHHHHhCc-c----CcCEEEEecCc
Confidence 57888899876 3456789999999999999888776 5 35666666554
No 455
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Probab=88.46 E-value=0.087 Score=53.46 Aligned_cols=37 Identities=11% Similarity=0.058 Sum_probs=27.8
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL 565 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~ 565 (703)
..|+.+.++|+... +..++.++|||+||..++....+
T Consensus 90 ~~D~~~~~~~l~~~-~~~~~~lvGhSmGG~iA~~~A~~ 126 (305)
T 1tht_A 90 KNSLCTVYHWLQTK-GTQNIGLIAASLSARVAYEVISD 126 (305)
T ss_dssp HHHHHHHHHHHHHT-TCCCEEEEEETHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHhC-CCCceEEEEECHHHHHHHHHhCc
Confidence 35677788888643 45789999999999877765554
No 456
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET: 2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D 1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A 2es4_A 1tah_B 1qge_D 1qge_E
Probab=88.42 E-value=0.19 Score=51.34 Aligned_cols=49 Identities=20% Similarity=0.247 Sum_probs=38.4
Q ss_pred hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
+-+.++.++...+..++++||||+|+.++..++...|+ +|+.++.++|.
T Consensus 65 l~~~i~~~l~~~~~~~v~lvGHS~GG~va~~~a~~~p~---~V~~lV~i~~p 113 (320)
T 1ys1_X 65 LLAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPD---LVASVTTIGTP 113 (320)
T ss_dssp HHHHHHHHHHHHCCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCC
T ss_pred HHHHHHHHHHHhCCCCEEEEEECHhHHHHHHHHHhChh---hceEEEEECCC
Confidence 34455666666777899999999999999988887665 67888888864
No 457
>1ei9_A Palmitoyl protein thioesterase 1; alpha/beta hydrolase, glycoprotein, hydrolase; HET: NDG NAG; 2.25A {Bos taurus} SCOP: c.69.1.13 PDB: 1eh5_A* 1exw_A* 3gro_A
Probab=88.37 E-value=0.12 Score=51.57 Aligned_cols=47 Identities=9% Similarity=0.062 Sum_probs=34.9
Q ss_pred HHHHHHHhhCC-CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccc
Q psy7108 615 ATIDYILNQTG-HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 663 (703)
Q Consensus 615 a~i~~i~~~t~-~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p 663 (703)
+.++++....+ ..++++||||||+.++..++..+|+ .+|+.+|.+++
T Consensus 67 ~~~~~l~~~~~l~~~~~lvGhSmGG~ia~~~a~~~~~--~~v~~lv~~~~ 114 (279)
T 1ei9_A 67 TVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPS--PPMVNLISVGG 114 (279)
T ss_dssp HHHHHHHSCGGGTTCEEEEEETTHHHHHHHHHHHCCS--SCEEEEEEESC
T ss_pred HHHHHHHhhhhccCCEEEEEECHHHHHHHHHHHHcCC--cccceEEEecC
Confidence 44555544322 2689999999999999998888775 25888888885
No 458
>4ezi_A Uncharacterized protein; alpha-beta hydrolases fold, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.15A {Legionella pneumophila subsp}
Probab=88.33 E-value=0.022 Score=59.84 Aligned_cols=27 Identities=15% Similarity=0.111 Sum_probs=21.0
Q ss_pred CcceEEEEEecCceeeeeccCCCchhh
Q psy7108 544 HNSLITLGHSLGTTNVLIAGSLRPEYQ 570 (703)
Q Consensus 544 ~~~~~~~g~S~G~~~~~~~~~~~~~~~ 570 (703)
..+++++|||+||..++.+....|+|.
T Consensus 160 ~~~v~l~G~S~GG~~al~~A~~~p~~~ 186 (377)
T 4ezi_A 160 SDKLYLAGYSEGGFSTIVMFEMLAKEY 186 (377)
T ss_dssp EEEEEEEEETHHHHHHHHHHHHHHHHC
T ss_pred CCceEEEEECHHHHHHHHHHHHhhhhC
Confidence 479999999999988877665555553
No 459
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=88.30 E-value=24 Score=35.93 Aligned_cols=79 Identities=15% Similarity=0.084 Sum_probs=49.5
Q ss_pred ccccCCCcCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCceeEEEe-------cCCCcEEEEEEecC---CCEEEEE-
Q psy7108 41 EVLSGHEGPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDTQHETI-------QLLSDALCVAYKPD---GTEIVVA- 109 (703)
Q Consensus 41 ~~l~gH~~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~~~~~~-------~~~~~V~~v~~spd---g~~las~- 109 (703)
.++...-..-+.++|.| +|.++++--..|.|++++..++.. ..+. ........++++|+ +..|.+.
T Consensus 25 ~~va~gL~~P~~ia~~p--dG~llVter~~G~I~~v~~~~g~~-~~v~~~~~v~~~g~~GllGia~~Pdf~~~g~lYv~y 101 (347)
T 3das_A 25 RTVATGLNSPWGLAPLP--GGDLLVSSRDEATITRVDAKTGRK-TELGEVPGVSPSGEGGLLGIALSPDYASDHMVYAYF 101 (347)
T ss_dssp EEEECCCSSEEEEEECT--TSCEEEEETTTCEEEEECTTTCCE-EEEEECTTCCCBTTBSEEEEEECTTHHHHCEEEEEE
T ss_pred EEeecCCCCceEEEEcC--CCcEEEEEecCCEEEEEECCCCcE-eeecccCceeecCCCCceeeEeccccccCCEEEEEE
Confidence 34444445678999999 999888776588898887654432 2221 23456899999996 3444432
Q ss_pred E--CCCeEEEEEcCC
Q psy7108 110 T--LDGQLIMFDVES 122 (703)
Q Consensus 110 s--~dg~I~vwd~~~ 122 (703)
+ .++.|.-|....
T Consensus 102 t~~~~~~v~R~~~~~ 116 (347)
T 3das_A 102 TSASDNRIVRMLYDE 116 (347)
T ss_dssp ECSSSEEEEEEEBCT
T ss_pred ecCCCCEEEEEEeCC
Confidence 2 344555565543
No 460
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene, isopropylbenzene, META-cleavage compound hydrolase; 1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB: 1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A 2d0d_A
Probab=88.26 E-value=0.23 Score=49.25 Aligned_cols=43 Identities=14% Similarity=0.159 Sum_probs=35.2
Q ss_pred HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
++.-+.+++++||||+|+.+++.++..+|+ +|+.+++++|...
T Consensus 89 l~~l~~~~~~lvGhS~GG~ia~~~A~~~P~---~v~~lvl~~~~~~ 131 (282)
T 1iup_A 89 MDALEIEKAHIVGNAFGGGLAIATALRYSE---RVDRMVLMGAAGT 131 (282)
T ss_dssp HHHTTCCSEEEEEETHHHHHHHHHHHHSGG---GEEEEEEESCCCS
T ss_pred HHHhCCCceEEEEECHhHHHHHHHHHHChH---HHHHHHeeCCccC
Confidence 445566789999999999999999988776 5788888887654
No 461
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold, cyanogenesis; 2.50A {Arabidopsis thaliana} SCOP: c.69.1.0
Probab=88.06 E-value=0.53 Score=45.26 Aligned_cols=43 Identities=21% Similarity=0.318 Sum_probs=34.7
Q ss_pred hhCCC-CceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 622 NQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 622 ~~t~~-~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
...+. .+++++|||+|+.+++.++..+|+ +++.++.++|....
T Consensus 67 ~~l~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 110 (258)
T 3dqz_A 67 KSLPENEEVILVGFSFGGINIALAADIFPA---KIKVLVFLNAFLPD 110 (258)
T ss_dssp HTSCTTCCEEEEEETTHHHHHHHHHTTCGG---GEEEEEEESCCCCC
T ss_pred HHhcccCceEEEEeChhHHHHHHHHHhChH---hhcEEEEecCCCCC
Confidence 33454 789999999999999999999775 58888888886543
No 462
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=87.99 E-value=0.21 Score=49.14 Aligned_cols=55 Identities=20% Similarity=0.269 Sum_probs=41.1
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCC----chH----------HHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR----PEY----------QTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~----~~~----------~~~i~~~~~l~p~~ 665 (703)
-|+-+.++++++..+..+++++|||+|+.+++.++... |.+ ..+++.+++++|+.
T Consensus 98 ~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~~~~~~p~~~~~~~~~~~~~~~v~~~v~~~~~~ 166 (273)
T 1vkh_A 98 YDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAALKDPQEKMSEAQLQMLGLLQIVKRVFLLDGIY 166 (273)
T ss_dssp HHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTGGGSCTTTCCHHHHHHHHHHTTEEEEEEESCCC
T ss_pred HHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHHhccCCccccccccccccCCcccceeeeecccc
Confidence 46677888888877777899999999999988877763 221 34566777777654
No 463
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta hydrolase fold; 2.10A {Escherichia coli}
Probab=87.97 E-value=0.25 Score=48.99 Aligned_cols=46 Identities=22% Similarity=0.224 Sum_probs=35.9
Q ss_pred HHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 618 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 618 ~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
.-++...+.++++++|||+|+.+++.++..+|+ +++.+++++|...
T Consensus 98 ~~~l~~l~~~~~~lvGhS~GG~ia~~~a~~~p~---~v~~lvl~~~~~~ 143 (289)
T 1u2e_A 98 KSVVDQLDIAKIHLLGNSMGGHSSVAFTLKWPE---RVGKLVLMGGGTG 143 (289)
T ss_dssp HHHHHHTTCCCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSCC
T ss_pred HHHHHHhCCCceEEEEECHhHHHHHHHHHHCHH---hhhEEEEECCCcc
Confidence 334455566789999999999999998888775 5778888887653
No 464
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta hydrolase fold, mutant M99T; 1.50A {Streptomyces aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Probab=87.93 E-value=0.081 Score=52.40 Aligned_cols=80 Identities=18% Similarity=0.119 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD 489 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (703)
+.......++..+.++||.|+..|.||...|.....
T Consensus 34 ~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-------------------------------------------- 69 (277)
T 1brt_A 34 LSGHSWERQSAALLDAGYRVITYDRRGFGQSSQPTT-------------------------------------------- 69 (277)
T ss_dssp CCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS--------------------------------------------
T ss_pred CcHHHHHHHHHHHhhCCCEEEEeCCCCCCCCCCCCC--------------------------------------------
Q ss_pred CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108 490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
...+.+..+.+.-++..-+.+++.++|||+||..++....+.|+
T Consensus 70 -----------------------------------~~~~~~~a~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 113 (277)
T 1brt_A 70 -----------------------------------GYDYDTFAADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGT 113 (277)
T ss_dssp -----------------------------------CCSHHHHHHHHHHHHHHHTCCSEEEEEEGGGHHHHHHHHHHHCS
T ss_pred -----------------------------------CccHHHHHHHHHHHHHHhCCCceEEEEECccHHHHHHHHHHcCc
No 465
>1r3d_A Conserved hypothetical protein VC1974; structural genomics, hydrolase, NYSGXRC, NEW YORK SGX research center for structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP: c.69.1.35
Probab=87.91 E-value=0.18 Score=49.42 Aligned_cols=17 Identities=6% Similarity=-0.052 Sum_probs=14.9
Q ss_pred ccccceeecccCccccc
Q psy7108 425 RGYDIWLWNARGNVYSR 441 (703)
Q Consensus 425 ~~~~~~~~~~~~~~~~~ 441 (703)
.||.|...|.||...|.
T Consensus 42 ~~~~vi~~Dl~GhG~S~ 58 (264)
T 1r3d_A 42 TQCAALTLDLPGHGTNP 58 (264)
T ss_dssp SSCEEEEECCTTCSSCC
T ss_pred cCceEEEecCCCCCCCC
Confidence 69999999999987664
No 466
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein, BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics, PSI-2; 1.72A {Homo sapiens}
Probab=87.90 E-value=0.071 Score=49.58 Aligned_cols=42 Identities=19% Similarity=0.208 Sum_probs=28.6
Q ss_pred HHhHccCCC-cceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 536 DYILNQTGH-NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 536 ~~i~~~~~~-~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
+.++..-+. .++.++|||+||..++....+.| ++.++..+|.
T Consensus 57 ~~~~~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p-----v~~lvl~~~~ 99 (194)
T 2qs9_A 57 PFMETELHCDEKTIIIGHSSGAIAAMRYAETHR-----VYAIVLVSAY 99 (194)
T ss_dssp HHHHHTSCCCTTEEEEEETHHHHHHHHHHHHSC-----CSEEEEESCC
T ss_pred HHHHHHhCcCCCEEEEEcCcHHHHHHHHHHhCC-----CCEEEEEcCC
Confidence 344444344 78999999999998776665554 6666666654
No 467
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB: 3cxu_A*
Probab=87.88 E-value=0.1 Score=52.99 Aligned_cols=35 Identities=20% Similarity=0.275 Sum_probs=25.0
Q ss_pred CcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 544 HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 544 ~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
.+++.++|||+||..++....+.|+ +++.++..+|
T Consensus 103 ~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvl~~~ 137 (328)
T 2cjp_A 103 EEKVFVVAHDWGALIAWHLCLFRPD---KVKALVNLSV 137 (328)
T ss_dssp CSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESC
T ss_pred CCCeEEEEECHHHHHHHHHHHhChh---heeEEEEEcc
Confidence 5689999999999988776665553 4555555443
No 468
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.50A {Pseudomonas aeruginosa}
Probab=87.87 E-value=0.26 Score=49.02 Aligned_cols=49 Identities=24% Similarity=0.262 Sum_probs=39.5
Q ss_pred HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
-+.+..++...+..+++++|||+|+.+++.++..+|+ .++.+++++|+.
T Consensus 101 ~~~~~~~~~~~~~~~~~l~G~S~Gg~~a~~~a~~~p~---~v~~lvl~~~~~ 149 (315)
T 4f0j_A 101 AANTHALLERLGVARASVIGHSMGGMLATRYALLYPR---QVERLVLVNPIG 149 (315)
T ss_dssp HHHHHHHHHHTTCSCEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCSC
T ss_pred HHHHHHHHHHhCCCceEEEEecHHHHHHHHHHHhCcH---hhheeEEecCcc
Confidence 3455566666777789999999999999999988775 578888898864
No 469
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.60A {Thermus thermophilus} SCOP: c.69.1.27
Probab=87.84 E-value=0.27 Score=46.66 Aligned_cols=51 Identities=12% Similarity=-0.002 Sum_probs=38.7
Q ss_pred cchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
-|+.+.++++..... .++.++|||+|+.+++.++..+|+ .+..++..+|..
T Consensus 90 ~d~~~~~~~l~~~~~-~~i~l~G~S~Gg~~a~~~a~~~~~---~~~~~~~~~~~~ 140 (238)
T 1ufo_A 90 EEARRVAEEAERRFG-LPLFLAGGSLGAFVAHLLLAEGFR---PRGVLAFIGSGF 140 (238)
T ss_dssp HHHHHHHHHHHHHHC-CCEEEEEETHHHHHHHHHHHTTCC---CSCEEEESCCSS
T ss_pred HHHHHHHHHHHhccC-CcEEEEEEChHHHHHHHHHHhccC---cceEEEEecCCc
Confidence 577888998876544 789999999999999998888774 345555555543
No 470
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism; 1.90A {Burkholderia xenovorans}
Probab=87.83 E-value=0.33 Score=47.61 Aligned_cols=42 Identities=12% Similarity=0.072 Sum_probs=34.0
Q ss_pred hCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 623 QTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 623 ~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
.-+.++++++|||+|+.+++.++..+|+ +|+.+++++|....
T Consensus 88 ~l~~~~~~lvGhS~Gg~va~~~A~~~p~---~v~~lvl~~~~~~~ 129 (266)
T 2xua_A 88 TLKIARANFCGLSMGGLTGVALAARHAD---RIERVALCNTAARI 129 (266)
T ss_dssp HTTCCSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCSSC
T ss_pred hcCCCceEEEEECHHHHHHHHHHHhChh---hhheeEEecCCCCC
Confidence 3455689999999999999998888775 58888888887644
No 471
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=87.82 E-value=0.11 Score=51.52 Aligned_cols=42 Identities=14% Similarity=0.007 Sum_probs=27.2
Q ss_pred HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhh
Q psy7108 536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWA 580 (703)
Q Consensus 536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~ 580 (703)
..++..-+..++.++|||+||..++....+.|+ +++.++..+
T Consensus 101 ~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~ 142 (292)
T 3l80_A 101 LMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSK---ACLGFIGLE 142 (292)
T ss_dssp HHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSS---EEEEEEEES
T ss_pred HHHHHHhCCCCeEEEEEchhHHHHHHHHHhCch---heeeEEEEC
Confidence 334444455699999999999877766555443 444455444
No 472
>2pl5_A Homoserine O-acetyltransferase; alpha/beta hydrolase superfa transferase; 2.20A {Leptospira interrogans} SCOP: c.69.1.40
Probab=87.81 E-value=0.24 Score=50.92 Aligned_cols=50 Identities=18% Similarity=0.199 Sum_probs=39.1
Q ss_pred HHHHHHHhhCCCCce-EEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 615 ATIDYILNQTGHNSL-ITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 615 a~i~~i~~~t~~~~~-~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
+.+..++...+.+++ +++|||+|+.+++.++..+|+ +|+.+++++|....
T Consensus 132 ~dl~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~ 182 (366)
T 2pl5_A 132 KAQKLLVESLGIEKLFCVAGGSMGGMQALEWSIAYPN---SLSNCIVMASTAEH 182 (366)
T ss_dssp HHHHHHHHHTTCSSEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCCSBC
T ss_pred HHHHHHHHHcCCceEEEEEEeCccHHHHHHHHHhCcH---hhhheeEeccCccC
Confidence 344555556677788 799999999999999888776 57888888887654
No 473
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics, JOIN for structural genomics, JCSG; 2.69A {Xanthomonas campestris PV}
Probab=87.79 E-value=0.27 Score=48.66 Aligned_cols=53 Identities=21% Similarity=0.201 Sum_probs=42.3
Q ss_pred cchHHHHHHHHhhCC--CCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108 611 YDTTATIDYILNQTG--HNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG 668 (703)
Q Consensus 611 ~d~pa~i~~i~~~t~--~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~ 668 (703)
-|+-+.++++....+ ..+++++|||+|+.+++.++..+| ++.+++++|.....
T Consensus 83 ~d~~~~i~~l~~~~~~~~~~v~l~G~S~Gg~~a~~~a~~~~-----~~~~~l~~p~~~~~ 137 (290)
T 3ksr_A 83 DDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP-----VEWLALRSPALYKD 137 (290)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHTTTSC-----CSEEEEESCCCCCS
T ss_pred HHHHHHHHHHHhcCCCCccceEEEEEchHHHHHHHHHHhCC-----CCEEEEeCcchhhh
Confidence 578889999887653 357999999999999999998877 56677778876543
No 474
>4dnp_A DAD2; alpha/beta hydrolase, hydrolase; 2.15A {Petunia hybrida} PDB: 4dnq_A
Probab=87.64 E-value=0.31 Score=47.09 Aligned_cols=48 Identities=25% Similarity=0.282 Sum_probs=37.0
Q ss_pred HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
+.-++...+..+++++|||+|+.+++.++..+|+ +++.+++++|...+
T Consensus 80 ~~~~~~~~~~~~~~l~GhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 127 (269)
T 4dnp_A 80 LLHILDALGIDCCAYVGHSVSAMIGILASIRRPE---LFSKLILIGASPRF 127 (269)
T ss_dssp HHHHHHHTTCCSEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCSCC
T ss_pred HHHHHHhcCCCeEEEEccCHHHHHHHHHHHhCcH---hhceeEEeCCCCCC
Confidence 3334445566789999999999999988887765 57888999987543
No 475
>1vkh_A Putative serine hydrolase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.85A {Saccharomyces cerevisiae} SCOP: c.69.1.32
Probab=87.54 E-value=0.064 Score=53.05 Aligned_cols=38 Identities=26% Similarity=0.473 Sum_probs=29.9
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCC
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSL 565 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~ 565 (703)
+.|+.++++|+++.-+..++.++|||+||..++....+
T Consensus 97 ~~d~~~~~~~l~~~~~~~~i~l~G~S~GG~~a~~~a~~ 134 (273)
T 1vkh_A 97 LYDAVSNITRLVKEKGLTNINMVGHSVGATFIWQILAA 134 (273)
T ss_dssp HHHHHHHHHHHHHHHTCCCEEEEEETHHHHHHHHHHTG
T ss_pred HHHHHHHHHHHHHhCCcCcEEEEEeCHHHHHHHHHHHH
Confidence 44777788998876566799999999999877765554
No 476
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=87.52 E-value=0.29 Score=47.42 Aligned_cols=49 Identities=24% Similarity=0.438 Sum_probs=36.5
Q ss_pred HHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 614 TATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 614 pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
-+.++++ +.-+.++++++|||+|+.+++.++..+|+ .|+.+++++|..+
T Consensus 82 ~~~~~~l-~~l~~~~~~l~GhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 130 (254)
T 2ocg_A 82 KDAVDLM-KALKFKKVSLLGWSDGGITALIAAAKYPS---YIHKMVIWGANAY 130 (254)
T ss_dssp HHHHHHH-HHTTCSSEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCCSB
T ss_pred HHHHHHH-HHhCCCCEEEEEECHhHHHHHHHHHHChH---HhhheeEeccccc
Confidence 3444443 34456789999999999999999888776 4777888887654
No 477
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A* 2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A 3qmm_A
Probab=87.52 E-value=0.046 Score=50.30 Aligned_cols=49 Identities=22% Similarity=0.217 Sum_probs=31.3
Q ss_pred HHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhhhh
Q psy7108 535 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 584 (703)
Q Consensus 535 ~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~~~ 584 (703)
+..+++.-+..++.++|||+||..++..+.+. ....+++.++..+|...
T Consensus 59 ~~~~~~~~~~~~~~lvG~S~Gg~~a~~~~~~~-~~~~~v~~~v~~~~~~~ 107 (181)
T 1isp_A 59 VQKVLDETGAKKVDIVAHSMGGANTLYYIKNL-DGGNKVANVVTLGGANR 107 (181)
T ss_dssp HHHHHHHHCCSCEEEEEETHHHHHHHHHHHHS-SGGGTEEEEEEESCCGG
T ss_pred HHHHHHHcCCCeEEEEEECccHHHHHHHHHhc-CCCceEEEEEEEcCccc
Confidence 34444443557899999999998776655432 11346777777776543
No 478
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=87.41 E-value=0.28 Score=48.37 Aligned_cols=48 Identities=21% Similarity=0.149 Sum_probs=37.1
Q ss_pred HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
+..+++..+..+++++|||+|+.+++.++..+|+ +++.+++++|....
T Consensus 100 ~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~~ 147 (293)
T 3hss_A 100 TAALIETLDIAPARVVGVSMGAFIAQELMVVAPE---LVSSAVLMATRGRL 147 (293)
T ss_dssp HHHHHHHHTCCSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCSSC
T ss_pred HHHHHHhcCCCcEEEEeeCccHHHHHHHHHHChH---HHHhhheecccccC
Confidence 3334444466789999999999999988888765 58888888887644
No 479
>2x5x_A PHB depolymerase PHAZ7; biopolymers, oxyanion HOLE, hydrolase, biodegradation, catal; HET: PG4; 1.20A {Paucimonas lemoignei} PDB: 2vtv_A* 2x76_A
Probab=87.39 E-value=0.028 Score=58.14 Aligned_cols=54 Identities=22% Similarity=0.147 Sum_probs=37.9
Q ss_pred cCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 528 LYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 528 ~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
..++.+.++.++...+.+++.++|||+||..+...+.+.+ ..++++.++.++|+
T Consensus 111 ~~~l~~~I~~l~~~~g~~~v~LVGHSmGG~iA~~~a~~~~-~p~~V~~lVlla~p 164 (342)
T 2x5x_A 111 YAIIKTFIDKVKAYTGKSQVDIVAHSMGVSMSLATLQYYN-NWTSVRKFINLAGG 164 (342)
T ss_dssp HHHHHHHHHHHHHHHTCSCEEEEEETHHHHHHHHHHHHHT-CGGGEEEEEEESCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEEEECHHHHHHHHHHHHcC-chhhhcEEEEECCC
Confidence 4455667778877767789999999999987766554321 14567777776654
No 480
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris} PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Probab=87.35 E-value=0.29 Score=48.40 Aligned_cols=47 Identities=15% Similarity=0.133 Sum_probs=36.5
Q ss_pred HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.+..++...+..+++++|||+|+.+++.++..+|+ +++.+++++|..
T Consensus 93 ~~~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 139 (306)
T 3r40_A 93 QLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPG---RLSKLAVLDILP 139 (306)
T ss_dssp HHHHHHHHTTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred HHHHHHHHhCCCCEEEEEecchHHHHHHHHHhChh---hccEEEEecCCC
Confidence 34444555677789999999999999999888775 578888888643
No 481
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase fold, hydrolase; 2.00A {Oleispira antarctica}
Probab=87.29 E-value=0.3 Score=47.59 Aligned_cols=49 Identities=16% Similarity=0.141 Sum_probs=37.3
Q ss_pred HHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccccC
Q psy7108 617 IDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFLG 668 (703)
Q Consensus 617 i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~~ 668 (703)
+..++...+..+++++|||+|+.+++.++..+| ++++.+++++|.....
T Consensus 88 ~~~~~~~~~~~~~~lvG~S~Gg~~a~~~a~~~p---~~v~~lvl~~~~~~~~ 136 (282)
T 3qvm_A 88 VEEILVALDLVNVSIIGHSVSSIIAGIASTHVG---DRISDITMICPSPCFM 136 (282)
T ss_dssp HHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHG---GGEEEEEEESCCSBSB
T ss_pred HHHHHHHcCCCceEEEEecccHHHHHHHHHhCc---hhhheEEEecCcchhc
Confidence 334444556678999999999999998888755 4688899999876443
No 482
>1ex9_A Lactonizing lipase; alpha-beta hydrolase fold, phosphonate inhibitor; HET: OCP; 2.54A {Pseudomonas aeruginosa} SCOP: c.69.1.18
Probab=87.27 E-value=0.044 Score=55.10 Aligned_cols=43 Identities=19% Similarity=0.323 Sum_probs=28.2
Q ss_pred HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
..++...+..++.++|||+||.++..++.+.| ++++.++..+|
T Consensus 65 ~~~~~~~~~~~v~lvGhS~GG~~a~~~a~~~p---~~v~~lv~i~~ 107 (285)
T 1ex9_A 65 EEIVALSGQPKVNLIGHSHGGPTIRYVAAVRP---DLIASATSVGA 107 (285)
T ss_dssp HHHHHHHCCSCEEEEEETTHHHHHHHHHHHCG---GGEEEEEEESC
T ss_pred HHHHHHhCCCCEEEEEECHhHHHHHHHHHhCh---hheeEEEEECC
Confidence 33444435578999999999987766555443 35666666554
No 483
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Probab=87.23 E-value=0.11 Score=50.41 Aligned_cols=45 Identities=24% Similarity=0.398 Sum_probs=29.1
Q ss_pred hHHHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhhh
Q psy7108 534 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 582 (703)
Q Consensus 534 ~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p~ 582 (703)
.++++... +..++.++|||+||..++....+.|+ +++.++..+|.
T Consensus 84 ~~~~l~~l-~~~~~~l~GhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 128 (254)
T 2ocg_A 84 AVDLMKAL-KFKKVSLLGWSDGGITALIAAAKYPS---YIHKMVIWGAN 128 (254)
T ss_dssp HHHHHHHT-TCSSEEEEEETHHHHHHHHHHHHCTT---TEEEEEEESCC
T ss_pred HHHHHHHh-CCCCEEEEEECHhHHHHHHHHHHChH---HhhheeEeccc
Confidence 33444433 45689999999999887766655543 45555555553
No 484
>3og9_A Protein YAHD A copper inducible hydrolase; alpha/beta hydrolase, copper homeostasis, malic acid; 1.88A {Lactococcus lactis subsp} SCOP: c.69.1.0
Probab=87.22 E-value=0.25 Score=46.38 Aligned_cols=51 Identities=12% Similarity=0.090 Sum_probs=37.1
Q ss_pred hHHHHHHHHhhCCC--CceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 613 TTATIDYILNQTGH--NSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 613 ~pa~i~~i~~~t~~--~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
+-+.++.+....+. .++.++|||+|+.+++.++..+|+ +++.+++++|...
T Consensus 86 ~~~~~~~~~~~~~~d~~~~~l~G~S~Gg~~a~~~a~~~~~---~~~~~v~~~~~~~ 138 (209)
T 3og9_A 86 LTDEVSLLAEKHDLDVHKMIAIGYSNGANVALNMFLRGKI---NFDKIIAFHGMQL 138 (209)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEEEETHHHHHHHHHHHTTSC---CCSEEEEESCCCC
T ss_pred HHHHHHHHHHhcCCCcceEEEEEECHHHHHHHHHHHhCCc---ccceEEEECCCCC
Confidence 34455555555443 689999999999999988888775 4667777777543
No 485
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI, protei structure initiative; HET: MSE 3OH; 1.70A {Escherichia coli} SCOP: c.69.1.26
Probab=87.21 E-value=0.17 Score=49.21 Aligned_cols=42 Identities=33% Similarity=0.339 Sum_probs=27.6
Q ss_pred HHhHccCCCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 536 DYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 536 ~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
+.++..-+ +++.++|||+||..++....+.|+ +++.++..+|
T Consensus 66 ~~l~~~l~-~~~~lvGhS~Gg~va~~~a~~~p~---~v~~lvl~~~ 107 (258)
T 1m33_A 66 EAVLQQAP-DKAIWLGWSLGGLVASQIALTHPE---RVRALVTVAS 107 (258)
T ss_dssp HHHHTTSC-SSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESC
T ss_pred HHHHHHhC-CCeEEEEECHHHHHHHHHHHHhhH---hhceEEEECC
Confidence 33443333 689999999999887766655543 5665665543
No 486
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=87.18 E-value=0.31 Score=48.43 Aligned_cols=40 Identities=20% Similarity=0.175 Sum_probs=32.5
Q ss_pred hhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 622 NQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 622 ~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
+.-+.++++++|||+|+.+++.++..+|+ ++.+++++|..
T Consensus 90 ~~l~~~~~~lvGhS~Gg~ia~~~a~~~p~----v~~lvl~~~~~ 129 (286)
T 2yys_A 90 EALGVERFGLLAHGFGAVVALEVLRRFPQ----AEGAILLAPWV 129 (286)
T ss_dssp HHTTCCSEEEEEETTHHHHHHHHHHHCTT----EEEEEEESCCC
T ss_pred HHhCCCcEEEEEeCHHHHHHHHHHHhCcc----hheEEEeCCcc
Confidence 33466789999999999999999888775 67788888764
No 487
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase; 2.20A {Unidentified}
Probab=87.16 E-value=0.21 Score=49.51 Aligned_cols=49 Identities=14% Similarity=0.222 Sum_probs=37.6
Q ss_pred HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccccc
Q psy7108 616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAFL 667 (703)
Q Consensus 616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~~ 667 (703)
.+..++...+..+++++|||+|+.+++.++..+|+ +|+.+++++|....
T Consensus 85 ~~~~~~~~~~~~~~~lvGhS~Gg~~a~~~a~~~p~---~v~~lvl~~~~~~~ 133 (309)
T 3u1t_A 85 YMDGFIDALGLDDMVLVIHDWGSVIGMRHARLNPD---RVAAVAFMEALVPP 133 (309)
T ss_dssp HHHHHHHHHTCCSEEEEEEEHHHHHHHHHHHHCTT---TEEEEEEEEESCTT
T ss_pred HHHHHHHHcCCCceEEEEeCcHHHHHHHHHHhChH---hheEEEEeccCCCC
Confidence 33344444466789999999999999998888775 58888888877544
No 488
>2b61_A Homoserine O-acetyltransferase; acyl-enzyme, aspartate pathway, coenzyme A, structure-functi studies, alpha-beta hydrolase fold; 1.65A {Haemophilus influenzae} SCOP: c.69.1.40
Probab=87.15 E-value=0.24 Score=51.18 Aligned_cols=51 Identities=18% Similarity=0.140 Sum_probs=39.5
Q ss_pred hHHHHHHHHhhCCCCceE-EEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 613 TTATIDYILNQTGHNSLI-TLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 613 ~pa~i~~i~~~t~~~~~~-~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
+-+.+..++...+..+++ ++|||+|+.+++.++..+|+ .|+.+++++|...
T Consensus 139 ~~~~l~~~l~~l~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~~ 190 (377)
T 2b61_A 139 IVKVQKALLEHLGISHLKAIIGGSFGGMQANQWAIDYPD---FMDNIVNLCSSIY 190 (377)
T ss_dssp HHHHHHHHHHHTTCCCEEEEEEETHHHHHHHHHHHHSTT---SEEEEEEESCCSS
T ss_pred HHHHHHHHHHHcCCcceeEEEEEChhHHHHHHHHHHCch---hhheeEEeccCcc
Confidence 334555556666777888 99999999999999888776 5778888888654
No 489
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP: c.69.1.29 PDB: 1r1d_A* 4diu_A
Probab=87.14 E-value=0.41 Score=46.33 Aligned_cols=45 Identities=22% Similarity=0.265 Sum_probs=33.0
Q ss_pred hHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccc
Q psy7108 613 TTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 663 (703)
Q Consensus 613 ~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p 663 (703)
+-+.++++.. .+.++++++|||+|+.+++.++..+| ++.++.+++
T Consensus 73 ~~~~~~~l~~-~~~~~~~lvG~SmGG~ia~~~a~~~p-----v~~lvl~~~ 117 (247)
T 1tqh_A 73 VMNGYEFLKN-KGYEKIAVAGLSLGGVFSLKLGYTVP-----IEGIVTMCA 117 (247)
T ss_dssp HHHHHHHHHH-HTCCCEEEEEETHHHHHHHHHHTTSC-----CSCEEEESC
T ss_pred HHHHHHHHHH-cCCCeEEEEEeCHHHHHHHHHHHhCC-----CCeEEEEcc
Confidence 3445555443 35568999999999999999888877 666776554
No 490
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK; 1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A* 2wug_A* 2vf2_A
Probab=87.09 E-value=0.24 Score=49.53 Aligned_cols=43 Identities=19% Similarity=0.247 Sum_probs=34.8
Q ss_pred HhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccccc
Q psy7108 621 LNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSAF 666 (703)
Q Consensus 621 ~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~~ 666 (703)
+...+.+++++||||+|+.+++.++..+|+ +|+.+++++|...
T Consensus 100 l~~l~~~~~~lvGhS~Gg~ia~~~A~~~p~---~v~~lvl~~~~~~ 142 (291)
T 2wue_A 100 FDQLGLGRVPLVGNALGGGTAVRFALDYPA---RAGRLVLMGPGGL 142 (291)
T ss_dssp HHHHTCCSEEEEEETHHHHHHHHHHHHSTT---TEEEEEEESCSSS
T ss_pred HHHhCCCCeEEEEEChhHHHHHHHHHhChH---hhcEEEEECCCCC
Confidence 334456789999999999999999988776 5788899888764
No 491
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase, polyketide, tailoring enzyme, structural proteomics in europe, spine; HET: AKT 1PE; 1.45A {Streptomyces purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Probab=87.05 E-value=0.31 Score=48.63 Aligned_cols=54 Identities=15% Similarity=0.154 Sum_probs=39.2
Q ss_pred eeeeeeecchHHHHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 604 NIFQVGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 604 s~~e~~~~d~pa~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
++++++ -|+-+.++. .+.++++++|||+|+.+++.++..+|+ .|+.+++++|..
T Consensus 76 ~~~~~a-~dl~~~l~~----l~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~~ 129 (298)
T 1q0r_A 76 GFGELA-ADAVAVLDG----WGVDRAHVVGLSMGATITQVIALDHHD---RLSSLTMLLGGG 129 (298)
T ss_dssp CHHHHH-HHHHHHHHH----TTCSSEEEEEETHHHHHHHHHHHHCGG---GEEEEEEESCCC
T ss_pred CHHHHH-HHHHHHHHH----hCCCceEEEEeCcHHHHHHHHHHhCch---hhheeEEecccC
Confidence 344444 245555554 456789999999999999999988776 577888887655
No 492
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=87.03 E-value=1.9 Score=41.02 Aligned_cols=108 Identities=8% Similarity=0.050 Sum_probs=61.0
Q ss_pred cCeEEEEEcCCCCCCEEEEEeCCCcEEEEEcCCCce-----eEEEecC--CCcEEEEEEecCCCEEEEEECCCeEEEEEc
Q psy7108 48 GPVSCIEFSPVLSSTGMVSASWDKTVKLWNAVETDT-----QHETIQL--LSDALCVAYKPDGTEIVVATLDGQLIMFDV 120 (703)
Q Consensus 48 ~~V~~l~~sp~~dg~~L~sgs~Dg~V~iWd~~~~~~-----~~~~~~~--~~~V~~v~~spdg~~las~s~dg~I~vwd~ 120 (703)
..+.+++|+| +|.+.+. .+|.+.--+..+.+. ....+.. -..-.++.|.|+|.+.++ .||.|+-++.
T Consensus 41 ~~~~~laf~P--~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~Gw~~F~a~~fD~~G~LYav--~dG~iyr~~p 114 (236)
T 1tl2_A 41 SNFKFLFLSP--GGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNGGWNQFQFLFFDPNGYLYAV--SKDKLYKASP 114 (236)
T ss_dssp TTCSEEEECT--TSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECSCGGGCSEEEECTTSCEEEE--ETTEEEEESC
T ss_pred ccceeEEECC--CccEEEE--eCCeEEEECCCCCCcccccccccEecccccccceEEEECCCCCEEEe--CCCEEEEeCC
Confidence 3677999999 9987766 566654444433211 0111111 011367899999987777 5698887765
Q ss_pred CCCcEEEEEeccccCCCCCCCCccchhhccc--CCccEEEEEEcCCCCEEEEEecCCcEE
Q psy7108 121 ESAAQVGSVEARRDLDSGRLDTDLVTREQSL--KAKAVSTVCYSADGSCILAAGQSKYIC 178 (703)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~V~~i~~spdg~~l~s~s~dg~I~ 178 (703)
.+...-.-+ ....... .-+.+..+.+.|+|.+.++. |+.++
T Consensus 115 P~~~~~~Wl---------------~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~ly 157 (236)
T 1tl2_A 115 PQSDTDNWI---------------ARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFY 157 (236)
T ss_dssp CCSTTCCHH---------------HHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEE
T ss_pred CcCCCCcee---------------ccccEeccCCCCceEEEEECCCceEEEEe--CCcEE
Confidence 321110000 0000000 01268999999999877666 67644
No 493
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics, PSI-biology, protein structure initiati alpha/beta hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Probab=87.03 E-value=0.16 Score=49.15 Aligned_cols=76 Identities=17% Similarity=0.232 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD 489 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (703)
+.......+...+. +||.|+..|.||...|....
T Consensus 34 ~~~~~~~~~~~~l~-~~~~vi~~d~~G~G~S~~~~--------------------------------------------- 67 (262)
T 3r0v_A 34 STRAGGAPLAERLA-PHFTVICYDRRGRGDSGDTP--------------------------------------------- 67 (262)
T ss_dssp CCGGGGHHHHHHHT-TTSEEEEECCTTSTTCCCCS---------------------------------------------
T ss_pred cChHHHHHHHHHHh-cCcEEEEEecCCCcCCCCCC---------------------------------------------
Q ss_pred CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCc
Q psy7108 490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRP 567 (703)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~ 567 (703)
...+.|..+.+..+++.-+ .++.++|||+||..++....+.|
T Consensus 68 -----------------------------------~~~~~~~~~~~~~~~~~l~-~~~~l~G~S~Gg~ia~~~a~~~p 109 (262)
T 3r0v_A 68 -----------------------------------PYAVEREIEDLAAIIDAAG-GAAFVFGMSSGAGLSLLAAASGL 109 (262)
T ss_dssp -----------------------------------SCCHHHHHHHHHHHHHHTT-SCEEEEEETHHHHHHHHHHHTTC
T ss_pred -----------------------------------CCCHHHHHHHHHHHHHhcC-CCeEEEEEcHHHHHHHHHHHhCC
No 494
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7; 2.10A {Thermoanaerobacterium SP}
Probab=87.02 E-value=0.22 Score=51.13 Aligned_cols=51 Identities=24% Similarity=0.230 Sum_probs=41.8
Q ss_pred cchHHHHHHHHhhC--CCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheeccccc
Q psy7108 611 YDTTATIDYILNQT--GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQSA 665 (703)
Q Consensus 611 ~d~pa~i~~i~~~t--~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~~ 665 (703)
.|+.+.++++.... +..++.++|||+|+.+++.++...|+ |+.+++++|+.
T Consensus 182 ~D~~~a~~~l~~~~~~d~~~i~l~G~S~GG~la~~~a~~~p~----v~~~vl~~p~~ 234 (346)
T 3fcy_A 182 LDTAQLAGIVMNMPEVDEDRVGVMGPSQGGGLSLACAALEPR----VRKVVSEYPFL 234 (346)
T ss_dssp HHHHHHHHHHHTSTTEEEEEEEEEEETHHHHHHHHHHHHSTT----CCEEEEESCSS
T ss_pred HHHHHHHHHHHhCCCCCcCcEEEEEcCHHHHHHHHHHHhCcc----ccEEEECCCcc
Confidence 57888999987765 34689999999999999998888775 77888888863
No 495
>3e0x_A Lipase-esterase related protein; APC60309, clostridium acetobutylicum ATCC 824, structural genomics, PSI-2; HET: MSE; 1.45A {Clostridium acetobutylicum}
Probab=87.01 E-value=0.41 Score=45.45 Aligned_cols=37 Identities=27% Similarity=0.264 Sum_probs=33.2
Q ss_pred ceEEEEeChhHHHHHHHhcC-CchHHHHHHHheecccccccC
Q psy7108 628 SLITLGHSLGTTNVLIAGSL-RPEYQTKVRLNVLWAQSAFLG 668 (703)
Q Consensus 628 ~~~~vg~s~g~~~~~~~~s~-~~~~~~~i~~~~~l~p~~~~~ 668 (703)
+++++|||+|+.+++.++.. +|+ ++.+++++|.....
T Consensus 85 ~~~l~G~S~Gg~~a~~~a~~~~p~----v~~lvl~~~~~~~~ 122 (245)
T 3e0x_A 85 NITLIGYSMGGAIVLGVALKKLPN----VRKVVSLSGGARFD 122 (245)
T ss_dssp CEEEEEETHHHHHHHHHHTTTCTT----EEEEEEESCCSBCT
T ss_pred ceEEEEeChhHHHHHHHHHHhCcc----ccEEEEecCCCccc
Confidence 89999999999999999998 887 88999999987663
No 496
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12 PDB: 1hl7_A*
Probab=86.94 E-value=0.076 Score=52.51 Aligned_cols=80 Identities=14% Similarity=0.105 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD 489 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (703)
+.......+...+.++||.|...|.||...|..-..
T Consensus 34 ~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-------------------------------------------- 69 (279)
T 1hkh_A 34 LDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNT-------------------------------------------- 69 (279)
T ss_dssp CCGGGGHHHHHHHHHTTEEEEEECCTTSTTSCCCSS--------------------------------------------
T ss_pred chhhHHhhhHHHHHhCCcEEEEeCCCCCCCCCCCCC--------------------------------------------
Q ss_pred CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCCch
Q psy7108 490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPE 568 (703)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~~~ 568 (703)
...+.+..+.+..++..-+..++.++|||+||..++....+.|+
T Consensus 70 -----------------------------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~va~~~a~~~p~ 113 (279)
T 1hkh_A 70 -----------------------------------GYDYDTFAADLHTVLETLDLRDVVLVGFSMGTGELARYVARYGH 113 (279)
T ss_dssp -----------------------------------CCSHHHHHHHHHHHHHHHTCCSEEEEEETHHHHHHHHHHHHHCS
T ss_pred -----------------------------------CCCHHHHHHHHHHHHHhcCCCceEEEEeChhHHHHHHHHHHcCc
No 497
>2zsh_A Probable gibberellin receptor GID1L1; plant hormone receptor, gibberellin, gibberellin signaling pathway, hydrolase, nucleus, receptor, developmental protein; HET: GA3; 1.80A {Arabidopsis thaliana} PDB: 2zsi_A*
Probab=86.91 E-value=0.046 Score=56.62 Aligned_cols=82 Identities=15% Similarity=0.052 Sum_probs=0.0
Q ss_pred chhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCCCcCCC
Q psy7108 415 PPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSDEESSK 494 (703)
Q Consensus 415 l~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 494 (703)
...+.++ +||.|...|.|| .++..-
T Consensus 138 ~~~la~~---~g~~vv~~d~rg----------~~~~~~------------------------------------------ 162 (351)
T 2zsh_A 138 CRRLVGL---CKCVVVSVNYRR----------APENPY------------------------------------------ 162 (351)
T ss_dssp HHHHHHH---HTSEEEEECCCC----------TTTSCT------------------------------------------
T ss_pred HHHHHHH---cCCEEEEecCCC----------CCCCCC------------------------------------------
Q ss_pred cccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccC------CCc-ceEEEEEecCceeeeeccCCCc
Q psy7108 495 DDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQT------GHN-SLITLGHSLGTTNVLIAGSLRP 567 (703)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~------~~~-~~~~~g~S~G~~~~~~~~~~~~ 567 (703)
...+.|+.++++|+.... +.+ +++++|||+||..++....+.+
T Consensus 163 ------------------------------~~~~~D~~~~~~~l~~~~~~~~~~d~~~~i~l~G~S~GG~la~~~a~~~~ 212 (351)
T 2zsh_A 163 ------------------------------PCAYDDGWIALNWVNSRSWLKSKKDSKVHIFLAGDSSGGNIAHNVALRAG 212 (351)
T ss_dssp ------------------------------THHHHHHHHHHHHHHTCGGGCCTTTSSCEEEEEEETHHHHHHHHHHHHHH
T ss_pred ------------------------------chhHHHHHHHHHHHHhCchhhcCCCCCCcEEEEEeCcCHHHHHHHHHHhh
Q ss_pred hhhhhHHHhhhhhh
Q psy7108 568 EYQTKVRLNVLWAQ 581 (703)
Q Consensus 568 ~~~~~~~~~~~~~p 581 (703)
+...+++..++.+|
T Consensus 213 ~~~~~v~~~vl~~p 226 (351)
T 2zsh_A 213 ESGIDVLGNILLNP 226 (351)
T ss_dssp TTTCCCCEEEEESC
T ss_pred ccCCCeeEEEEECC
No 498
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=86.90 E-value=0.26 Score=48.75 Aligned_cols=46 Identities=15% Similarity=0.049 Sum_probs=35.8
Q ss_pred HHHHHHhhCCCCceEEEEeChhHHHHHHHhcCCchHHHHHHHheecccc
Q psy7108 616 TIDYILNQTGHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQS 664 (703)
Q Consensus 616 ~i~~i~~~t~~~~~~~vg~s~g~~~~~~~~s~~~~~~~~i~~~~~l~p~ 664 (703)
.+.-++...+..+++++|||+|+.+++.++..+|+ +++.+++++|.
T Consensus 99 ~l~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~~p~---~v~~lvl~~~~ 144 (292)
T 3l80_A 99 AILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSK---ACLGFIGLEPT 144 (292)
T ss_dssp HHHHHHHHSCCSEEEEEEETTHHHHHHHHHHHCSS---EEEEEEEESCC
T ss_pred HHHHHHHHhCCCCeEEEEEchhHHHHHHHHHhCch---heeeEEEECCC
Confidence 34445555677789999999999999999888776 57778888854
No 499
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Probab=86.80 E-value=0.1 Score=51.35 Aligned_cols=80 Identities=11% Similarity=0.074 Sum_probs=0.0
Q ss_pred CCcccchhhhhhcccccccceeecccCccccccCcccCcCCccceeeeecccchhhhhhhhcCCcccccccccccCCCCC
Q psy7108 410 DTKFLPPTLFARMRTRGYDIWLWNARGNVYSREHVNLTSEQNKFYRFSCDFNVYTLELISRLGPLRIKPKVEKMETGSSD 489 (703)
Q Consensus 410 ~~~~sl~~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 489 (703)
+.......++..+.++||.|...|.||...|.....
T Consensus 30 ~~~~~~~~~~~~L~~~g~~vi~~D~~G~G~S~~~~~-------------------------------------------- 65 (273)
T 1a8s_A 30 LNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS-------------------------------------------- 65 (273)
T ss_dssp CCGGGGHHHHHHHHHTTCEEEEECCTTSTTSCCCSS--------------------------------------------
T ss_pred CcHHHHhhHHhhHhhCCcEEEEECCCCCCCCCCCCC--------------------------------------------
Q ss_pred CcCCCcccceeecccCcCCCCCCccccccCchhhhhcccCCchhhHHHhHccCCCcceEEEEEecCceeeeeccCCC-ch
Q psy7108 490 EESSKDDETEIRVLDEDVPRSSDTGDIQLKSTRMNELGLYDTTATIDYILNQTGHNSLITLGHSLGTTNVLIAGSLR-PE 568 (703)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~d~~~~~~~i~~~~~~~~~~~~g~S~G~~~~~~~~~~~-~~ 568 (703)
...+.+..+-+.-++..-+.+++.++|||+||..++...++. |+
T Consensus 66 -----------------------------------~~~~~~~~~dl~~~l~~l~~~~~~lvGhS~Gg~ia~~~a~~~~p~ 110 (273)
T 1a8s_A 66 -----------------------------------GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTA 110 (273)
T ss_dssp -----------------------------------CCSHHHHHHHHHHHHHHTTCCSEEEEEETHHHHHHHHHHHHHCST
T ss_pred -----------------------------------CCCHHHHHHHHHHHHHHhCCCCeEEEEeChHHHHHHHHHHhcCch
No 500
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A {Streptomyces aureofaciens} SCOP: c.69.1.12
Probab=86.77 E-value=0.11 Score=51.00 Aligned_cols=37 Identities=16% Similarity=0.167 Sum_probs=23.3
Q ss_pred CCcceEEEEEecCceeeeeccCCCchhhhhHHHhhhhhh
Q psy7108 543 GHNSLITLGHSLGTTNVLIAGSLRPEYQTKVRLNVLWAQ 581 (703)
Q Consensus 543 ~~~~~~~~g~S~G~~~~~~~~~~~~~~~~~~~~~~~~~p 581 (703)
+.+++.++|||+||..++..+.+. ..++++.++..+|
T Consensus 84 ~~~~~~lvGhS~Gg~ia~~~a~~~--~p~~v~~lvl~~~ 120 (274)
T 1a8q_A 84 DLRDVTLVAHSMGGGELARYVGRH--GTGRLRSAVLLSA 120 (274)
T ss_dssp TCCSEEEEEETTHHHHHHHHHHHH--CSTTEEEEEEESC
T ss_pred CCCceEEEEeCccHHHHHHHHHHh--hhHheeeeeEecC
Confidence 346899999999998765433321 0235665565554
Done!