BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy711
(532 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q80Z96|VANG1_MOUSE Vang-like protein 1 OS=Mus musculus GN=Vangl1 PE=1 SV=2
Length = 526
Score = 411 bits (1056), Expect = e-114, Method: Compositional matrix adjust.
Identities = 223/486 (45%), Positives = 314/486 (64%), Gaps = 30/486 (6%)
Query: 48 QDENWGENTTAVTGNTSEQSGSLEDLALWPGGNQETGLLFLCHRYIGSVFTGILSVISFL 107
QD+NWGE TTA+TG TSE S S ED+A + E + C RY+G L ++ FL
Sbjct: 70 QDDNWGETTTAITG-TSEHSISQEDIAR-ISKDMEDSVGLDCKRYLGLTVASFLGLLVFL 127
Query: 108 SPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLLSFTFKMILLAVGAWAVFLR 167
+P+ + LP++ + L CG+ C+G+L+S +FK+++L +G WA+F R
Sbjct: 128 TPIAFILLPQI------------LWREELKPCGAICEGLLISVSFKLLILLIGTWALFFR 175
Query: 168 QPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARATVTGEDVLEYRVVVSYASS 227
+ RA +PR+F+FRA+++V +F+ ++YWLF+ V++ + Y+ +V YA S
Sbjct: 176 KQRADVPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDQN--------YKDIVQYAVS 227
Query: 228 FVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYAIGQLSIQRAAVWVLQKYYT 287
VDALLFIHY+ +VL+E+R LQP F ++V RS DG+S+ Y++G LSIQRAA+ VL+ YY
Sbjct: 228 LVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYK 287
Query: 288 EFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQSGGECNRSVSNVHPRRRDS 347
+F+IYNP L L SK + + K Y+VDG NN+T QS + DS
Sbjct: 288 DFTIYNPNL--LTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRR-----DS 340
Query: 348 SHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQEPVVG-GVPMDSYEAAQAVF 406
SHNE +YEE ++ERRVKKRRARL+ A EEAF HI+R +E G MD EAAQA+F
Sbjct: 341 SHNELYYEEAEHERRVKKRRARLVVAVEEAFIHIQRLQAEEQQKSPGEVMDPREAAQAIF 400
Query: 407 PSLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAFLEPFLIPAPVLQNEKEQK 466
PS+ARALQKYLR TRQQ HS+ESIL HLA C+++ ++P+AFLE +L P LQ +K++
Sbjct: 401 PSMARALQKYLRTTRQQHYHSMESILQHLAFCITNSMTPKAFLERYLSAGPTLQYDKDRW 460
Query: 467 EIQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHFNISEEVIHPKSNRFVLRM 526
W LI +E +T L++G VF L + SL+ +V +P +SEE I PKS++FVLR+
Sbjct: 461 LSTQWRLISEEAVTNGLRDGIVFVLKCLDFSLVVNVKKIPFIVLSEEFIDPKSHKFVLRL 520
Query: 527 SSETSV 532
SETSV
Sbjct: 521 QSETSV 526
>sp|Q8TAA9|VANG1_HUMAN Vang-like protein 1 OS=Homo sapiens GN=VANGL1 PE=1 SV=1
Length = 524
Score = 410 bits (1053), Expect = e-113, Method: Compositional matrix adjust.
Identities = 221/486 (45%), Positives = 311/486 (63%), Gaps = 30/486 (6%)
Query: 48 QDENWGENTTAVTGNTSEQSGSLEDLALWPGGNQETGLLFLCHRYIGSVFTGILSVISFL 107
QD+NWGE TTA+TG TSE S S ED+A + E + C RY+G L ++ FL
Sbjct: 68 QDDNWGETTTAITG-TSEHSISQEDIARI-SKDMEDSVGLDCKRYLGLTVASFLGLLVFL 125
Query: 108 SPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLLSFTFKMILLAVGAWAVFLR 167
+P+ + LP + + L CG+ C+G+ +S FK+++L +G WA+F R
Sbjct: 126 TPIAFILLPPI------------LWRDELEPCGTICEGLFISMAFKLLILLIGTWALFFR 173
Query: 168 QPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARATVTGEDVLEYRVVVSYASS 227
+ RA MPR+F+FRA+++V +F+ ++YWLF+ V++ + G +V YA S
Sbjct: 174 KRRADMPRVFVFRALLLVLIFLFVVSYWLFYGVRILDSRDRNYQG--------IVQYAVS 225
Query: 228 FVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYAIGQLSIQRAAVWVLQKYYT 287
VDALLFIHY+ +VL+E+R LQP F ++V RS DG+S+ Y++G LSIQRAA+ VL+ YY
Sbjct: 226 LVDALLFIHYLAIVLLELRQLQPMFTLQVVRSTDGESRFYSLGHLSIQRAALVVLENYYK 285
Query: 288 EFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQSGGECNRSVSNVHPRRRDS 347
+F+IYNP L L SK + + K Y+VDG NN+T QS + DS
Sbjct: 286 DFTIYNPNL--LTASKFRAAKHMAGLKVYNVDGPSNNATGQSRAMIAAAARRR-----DS 338
Query: 348 SHNERFYEEHDYERRVKKRRARLITATEEAFTHIKR-TGHQEPVVGGVPMDSYEAAQAVF 406
SHNE +YEE ++ERRVKKR+ARL+ A EEAF HI+R ++ G MD EAAQA+F
Sbjct: 339 SHNELYYEEAEHERRVKKRKARLVVAVEEAFIHIQRLQAEEQQKAPGEVMDPREAAQAIF 398
Query: 407 PSLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAFLEPFLIPAPVLQNEKEQK 466
PS+ARALQKYLR+TRQQ HS+ESIL HLA C+++ ++P+AFLE +L P LQ +K++
Sbjct: 399 PSMARALQKYLRITRQQNYHSMESILQHLAFCITNGMTPKAFLERYLSAGPTLQYDKDRW 458
Query: 467 EIQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHFNISEEVIHPKSNRFVLRM 526
W L+ DE +T L++G VF L + SL+ +V +P +SEE I PKS++FVLR+
Sbjct: 459 LSTQWRLVSDEAVTNGLRDGIVFVLKCLDFSLVVNVKKIPFIILSEEFIDPKSHKFVLRL 518
Query: 527 SSETSV 532
SETSV
Sbjct: 519 QSETSV 524
>sp|Q90Z05|VNG2B_XENLA Vang-like protein 2-B OS=Xenopus laevis GN=vangl2-b PE=1 SV=1
Length = 521
Score = 383 bits (983), Expect = e-105, Method: Compositional matrix adjust.
Identities = 202/446 (45%), Positives = 293/446 (65%), Gaps = 29/446 (6%)
Query: 89 CHRYIGSVFTGILSVISFLSPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLL 148
C R++G V G L+++SFL+P+ + LP++ + L CG+ C+G+ +
Sbjct: 103 CSRHLGVVIAGALALLSFLTPIAFMLLPQI------------LWREDLEQCGTACEGLFI 150
Query: 149 SFTFKMILLAVGAWAVFLRQPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARA 208
S FK+++L +G+WA+F R+P+A PR+F+FRA+++V +F+ ++YWLF+ V++ E
Sbjct: 151 SVAFKLLILLLGSWALFFRRPKAFFPRVFVFRALLMVLVFLLVVSYWLFYGVRILESRDK 210
Query: 209 TVTGEDVLEYRVVVSYASSFVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYA 268
G +V YA S VDALLF+HY+ VVL+E+R LQP F IKV RS DG S+ Y
Sbjct: 211 NYQG--------IVQYAVSLVDALLFVHYLAVVLLELRQLQPQFTIKVVRSTDGASRFYN 262
Query: 269 IGQLSIQRAAVWVLQKYYTEFSIYNPYLEKLPVSKSKKNHSHSSFKFYDV--DGGFNNST 326
IG LSIQR AVW+L+ YY +F +YNP L LP KS + S FK Y + + NNST
Sbjct: 263 IGHLSIQRVAVWILENYYHDFPVYNPALLNLP--KSILSKKMSGFKVYSLGEENNTNNST 320
Query: 327 LQSGGECNRSVSNVHPRRRDSSHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGH 386
QS + D+SHNE +YEE ++ERRV+KR+ARL+ A EEAFTHIKR
Sbjct: 321 GQSRAVIAAAARRR-----DNSHNEYYYEEAEHERRVRKRKARLVVAVEEAFTHIKRLQD 375
Query: 387 QEPVVGGVPMDSYEAAQAVFPSLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPR 446
++P MD EAAQA+F S+ARA+QKYLR T+QQP H++ESIL HL C++HD++P+
Sbjct: 376 EDPKNPREIMDPREAAQAIFASMARAMQKYLRTTKQQPYHTMESILQHLEFCITHDMTPK 435
Query: 447 AFLEPFLIPAPVLQNEKEQKEIQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALP 506
AFLE +L P P +Q K++ + W+L+ +E +T L++G VF+L + + SL+ S +P
Sbjct: 436 AFLERYLGPGPTIQYHKDRWLAKQWTLVSEEPVTNGLKDGVVFELKRQDFSLVVSTKKIP 495
Query: 507 HFNISEEVIHPKSNRFVLRMSSETSV 532
F +SEE + PKS++FV+R+ SETSV
Sbjct: 496 FFKLSEEFVDPKSHKFVMRLQSETSV 521
>sp|Q8UVJ6|VANG2_DANRE Vang-like protein 2 OS=Danio rerio GN=vangl2 PE=1 SV=1
Length = 526
Score = 377 bits (968), Expect = e-103, Method: Compositional matrix adjust.
Identities = 198/448 (44%), Positives = 286/448 (63%), Gaps = 29/448 (6%)
Query: 89 CHRYIGSVFTGILSVISFLSPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLL 148
C R+ G + +G+L + + L+ + + +L CG+ C+G+ +
Sbjct: 104 CRRFAGPIVSGVLGLFALLT------------PLAFLLLPQLLWRDSLEPCGTPCEGLYV 151
Query: 149 SFTFKMILLAVGAWAVFLRQPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARA 208
S FK+++L + +WA+FLR R+T+PR F+FR +++ +F+ +YWLF+ V++ E
Sbjct: 152 SLAFKLLVLLISSWALFLRPSRSTLPRFFVFRCLLMALVFLFVASYWLFYGVRVLEPRER 211
Query: 209 TVTGEDVLEYRVVVSYASSFVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYA 268
+YR +V YA S VDALLFI Y+ +VL+E+RHL+PAF +KV R+ DG S+ Y
Sbjct: 212 --------DYRGIVGYAVSLVDALLFIQYLALVLLEVRHLRPAFCLKVVRTTDGASRFYN 263
Query: 269 IGQLSIQRAAVWVLQKYYTEFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQ 328
+G LSIQRAAVWVL YYT+F +YNP L LP KS + S FK Y + G NST
Sbjct: 264 VGHLSIQRAAVWVLDHYYTDFPVYNPALLNLP--KSILSKKMSGFKVYSL--GEENSTNN 319
Query: 329 SGGECNRSVSNVHPRRRDSSHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQE 388
S G+ ++ RRRD+SHNE +YEE + +RRV+KR+ARL+ A EEAFTHIKR E
Sbjct: 320 STGQSRAMIAAAA-RRRDNSHNEYYYEEAEMDRRVRKRKARLVVAVEEAFTHIKRLQDDE 378
Query: 389 ----PVVGGVPMDSYEAAQAVFPSLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLS 444
P MD EAAQA+F +ARA+QKYLR TRQQP HS+ESI+SHL C++H+++
Sbjct: 379 AAASPKHPREVMDPREAAQAIFAPMARAMQKYLRTTRQQPYHSMESIISHLQFCITHNMT 438
Query: 445 PRAFLEPFLIPAPVLQNEKEQKEIQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHA 504
P+AFLE +L P P +Q ++E + W+L+ +E +T L+ G VF L + + +L+ +V
Sbjct: 439 PKAFLERYLTPGPTMQYQRENGRGRQWTLVSEEPVTAALRQGLVFSLRRLDFALVVTVTP 498
Query: 505 LPHFNISEEVIHPKSNRFVLRMSSETSV 532
LP N+ EE I PKS++FV+R+ SETSV
Sbjct: 499 LPFLNLGEEFIDPKSHKFVMRLQSETSV 526
>sp|Q90X64|VNG2A_XENLA Vang-like protein 2-A OS=Xenopus laevis GN=vangl2-a PE=1 SV=1
Length = 521
Score = 376 bits (966), Expect = e-103, Method: Compositional matrix adjust.
Identities = 203/444 (45%), Positives = 295/444 (66%), Gaps = 25/444 (5%)
Query: 89 CHRYIGSVFTGILSVISFLSPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLL 148
C R++G V G L+++SFL+P+ + LP++ + L CG+ C+G+ +
Sbjct: 103 CSRHLGVVIGGALALLSFLTPIAFMLLPQI------------LWREDLEQCGTACEGLFI 150
Query: 149 SFTFKMILLAVGAWAVFLRQPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARA 208
S FK+++L +G+WA+F R+P+A PR+F+FRA+++V +F+ ++YWLF+ V++ E
Sbjct: 151 SVAFKLLILLLGSWALFFRRPKAFFPRVFVFRALLMVLVFLLVVSYWLFYGVRILESRDK 210
Query: 209 TVTGEDVLEYRVVVSYASSFVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYA 268
G +V YA S VDALLF+HY+ VVL+E+R LQP F IKV RS DG S+ Y
Sbjct: 211 NYQG--------IVQYAVSLVDALLFVHYLAVVLLELRQLQPQFTIKVVRSTDGASRFYN 262
Query: 269 IGQLSIQRAAVWVLQKYYTEFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQ 328
IG LSIQR AVW+L+ YY +F +YNP L LP KS + S FK Y + G N+T
Sbjct: 263 IGHLSIQRVAVWILENYYHDFPVYNPALLNLP--KSILSKKMSGFKVYSL--GEENTTNN 318
Query: 329 SGGECNRSVSNVHPRRRDSSHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQE 388
S G+ ++ RRRD+SHNE +YEE ++ERRV+KR+ARL+ A EEAFTHIKR ++
Sbjct: 319 STGQSRAVIAAAA-RRRDNSHNEYYYEEAEHERRVRKRKARLVVAVEEAFTHIKRLQDED 377
Query: 389 PVVGGVPMDSYEAAQAVFPSLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAF 448
MD EAAQA+F S+ARA+QKYLR T+QQP H++ESIL HL C++HD++P+AF
Sbjct: 378 QKNPREIMDPREAAQAIFASMARAMQKYLRTTKQQPYHTMESILHHLEFCITHDMTPKAF 437
Query: 449 LEPFLIPAPVLQNEKEQKEIQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHF 508
LE +L P P +Q K++ + W+L+ +E +T L++G VF L + + SL+ S +P F
Sbjct: 438 LERYLGPGPTIQYHKDRWLAKQWTLVSEEPVTNGLKDGVVFVLKRQDFSLVVSTKKIPFF 497
Query: 509 NISEEVIHPKSNRFVLRMSSETSV 532
+SEE + PKS++FV+R+ SETSV
Sbjct: 498 KLSEEFVDPKSHKFVMRLQSETSV 521
>sp|Q4VBG5|VANG2_XENTR Vang-like protein 2 OS=Xenopus tropicalis GN=vangl2 PE=2 SV=1
Length = 521
Score = 375 bits (964), Expect = e-103, Method: Compositional matrix adjust.
Identities = 202/444 (45%), Positives = 295/444 (66%), Gaps = 25/444 (5%)
Query: 89 CHRYIGSVFTGILSVISFLSPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLL 148
C R++G V G L+++SFL+P+ + LP++ + L CG+ C+G+ +
Sbjct: 103 CSRHLGVVIGGALALLSFLTPIAFMLLPQI------------LWREDLEQCGTACEGLFI 150
Query: 149 SFTFKMILLAVGAWAVFLRQPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARA 208
S FK+++L +G+WA+F R+P+A PR+F+FRA+++V +F+ ++YWLF+ V++ E
Sbjct: 151 SVAFKLLILLLGSWALFFRRPKAFFPRVFVFRALLMVLVFLLVVSYWLFYGVRILESRDK 210
Query: 209 TVTGEDVLEYRVVVSYASSFVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYA 268
G +V YA S VDALLF+HY+ VVL+E+R LQP F +KV RS DG S+ Y
Sbjct: 211 NYQG--------IVQYAVSLVDALLFVHYLAVVLLELRQLQPQFTVKVVRSTDGASRFYN 262
Query: 269 IGQLSIQRAAVWVLQKYYTEFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQ 328
IG LSIQR AVW+L+ YY +F +YNP L LP KS + S FK Y + G N+T
Sbjct: 263 IGHLSIQRVAVWILENYYHDFPVYNPALLNLP--KSILSKKMSGFKVYSL--GEENTTNN 318
Query: 329 SGGECNRSVSNVHPRRRDSSHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQE 388
S G+ ++ RRRD+SHNE +YEE ++ERRV+KR+ARL+ A EEAFTHIKR ++
Sbjct: 319 STGQSRAVIAAAA-RRRDNSHNEYYYEEAEHERRVRKRKARLVVAVEEAFTHIKRLQDED 377
Query: 389 PVVGGVPMDSYEAAQAVFPSLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAF 448
MD EAAQA+F S+ARA+QKYLR T+QQP H++ESIL HL C++HD++P+AF
Sbjct: 378 QKNPREIMDPREAAQAIFASMARAMQKYLRTTKQQPYHTMESILHHLEFCITHDMTPKAF 437
Query: 449 LEPFLIPAPVLQNEKEQKEIQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHF 508
LE +L P P +Q K++ + W+L+ +E +T L++G VF L + + SL+ S +P F
Sbjct: 438 LERYLGPGPTIQYHKDRWLAKQWTLVSEEPVTNGLKDGVVFVLKRQDFSLVVSTKKIPFF 497
Query: 509 NISEEVIHPKSNRFVLRMSSETSV 532
+SEE + PKS++FV+R+ SETSV
Sbjct: 498 KLSEEFVDPKSHKFVMRLQSETSV 521
>sp|P84889|VANG2_RAT Vang-like protein 2 OS=Rattus norvegicus GN=Vangl2 PE=2 SV=1
Length = 521
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 311/485 (64%), Gaps = 27/485 (5%)
Query: 48 QDENWGENTTAVTGNTSEQSGSLEDLALWPGGNQETGLLFLCHRYIGSVFTGILSVISFL 107
+D+NWGE TT VT TSE S S +DL + E + C R++G IL+++SFL
Sbjct: 64 RDDNWGETTTVVT-GTSEHSISHDDLTR-IAKDMEDSVPLDCSRHLGVAAGAILALLSFL 121
Query: 108 SPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLLSFTFKMILLAVGAWAVFLR 167
+ + + L CG+ C+G+ +S FK+++L +G+WA+F R
Sbjct: 122 T------------PLAFLLLPPLLWREELEPCGTACEGLFISVAFKLLILLLGSWALFFR 169
Query: 168 QPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARATVTGEDVLEYRVVVSYASS 227
+P+A++PR+F+ RA+++V +F+ I+YWLF+ V++ + + G VV +A S
Sbjct: 170 RPKASLPRVFVLRALLMVLVFLLVISYWLFYGVRILDARERSYQG--------VVQFAVS 221
Query: 228 FVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYAIGQLSIQRAAVWVLQKYYT 287
VDALLF+HY+ VVL+E+R LQP F +KV RS DG S+ Y +G LSIQR AVW+L+KYY
Sbjct: 222 LVDALLFVHYLAVVLLELRQLQPQFTLKVVRSTDGASRFYNVGHLSIQRVAVWILEKYYH 281
Query: 288 EFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQSGGECNRSVSNVHPRRRDS 347
+F +YNP L LP KS S FK Y + G NST S G+ ++ RRRD+
Sbjct: 282 DFPVYNPALLNLP--KSVLAKKVSGFKVYSL--GEENSTNNSTGQSRAVIAAAA-RRRDN 336
Query: 348 SHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQEPVVGGVPMDSYEAAQAVFP 407
SHNE +YEE ++ERRV+KRRARL+ A EEAFTHIKR +E MD EAAQA+F
Sbjct: 337 SHNEYYYEEAEHERRVRKRRARLVVAVEEAFTHIKRLQEEEQKNPREVMDPREAAQAIFA 396
Query: 408 SLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAFLEPFLIPAPVLQNEKEQKE 467
S+ARA+QKYLR T+QQP H++ESIL HL C++HD++P+AFLE +L P +Q KE+
Sbjct: 397 SMARAMQKYLRTTKQQPYHTMESILQHLEFCITHDMTPKAFLERYLAAGPTIQYHKERWL 456
Query: 468 IQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHFNISEEVIHPKSNRFVLRMS 527
+ W+L+ +E +T L++G VF L + + SL+ S +P F +SEE + PKS++FV+R+
Sbjct: 457 AKQWTLVSEEPVTNGLKDGIVFLLKRQDFSLVVSTKKVPFFKLSEEFVDPKSHKFVMRLQ 516
Query: 528 SETSV 532
SETSV
Sbjct: 517 SETSV 521
>sp|Q91ZD4|VANG2_MOUSE Vang-like protein 2 OS=Mus musculus GN=Vangl2 PE=1 SV=3
Length = 521
Score = 339 bits (869), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 217/485 (44%), Positives = 311/485 (64%), Gaps = 27/485 (5%)
Query: 48 QDENWGENTTAVTGNTSEQSGSLEDLALWPGGNQETGLLFLCHRYIGSVFTGILSVISFL 107
+D+NWGE TT VT TSE S S +DL + E + C R++G IL+++SFL
Sbjct: 64 RDDNWGETTTVVT-GTSEHSISHDDLTR-IAKDMEDSVPLDCSRHLGVAAGAILALLSFL 121
Query: 108 SPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLLSFTFKMILLAVGAWAVFLR 167
+ + + L CG+ C+G+ +S FK+++L +G+WA+F R
Sbjct: 122 T------------PLAFLLLPPLLWREELEPCGTACEGLFISVAFKLLILLLGSWALFFR 169
Query: 168 QPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARATVTGEDVLEYRVVVSYASS 227
+P+A++PR+F+ RA+++V +F+ I+YWLF+ V++ + + G VV +A S
Sbjct: 170 RPKASLPRVFVLRALLMVLVFLLVISYWLFYGVRILDARERSYQG--------VVQFAVS 221
Query: 228 FVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYAIGQLSIQRAAVWVLQKYYT 287
VDALLF+HY+ VVL+E+R LQP F +KV RS DG S+ Y +G LSIQR AVW+L+KYY
Sbjct: 222 LVDALLFVHYLAVVLLELRQLQPQFTLKVVRSTDGASRFYNVGHLSIQRVAVWILEKYYH 281
Query: 288 EFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQSGGECNRSVSNVHPRRRDS 347
+F +YNP L LP KS S FK Y + G NST S G+ ++ RRRD+
Sbjct: 282 DFPVYNPALLNLP--KSVLAKKVSGFKVYSL--GEENSTNNSTGQSRAVIAAAA-RRRDN 336
Query: 348 SHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQEPVVGGVPMDSYEAAQAVFP 407
SHNE +YEE ++ERRV+KRRARL+ A EEAFTHIKR +E MD EAAQA+F
Sbjct: 337 SHNEYYYEEAEHERRVRKRRARLVVAVEEAFTHIKRLQEEEQKNPREVMDPREAAQAIFA 396
Query: 408 SLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAFLEPFLIPAPVLQNEKEQKE 467
S+ARA+QKYLR T+QQP H++ESIL HL C++HD++P+AFLE +L P +Q KE+
Sbjct: 397 SMARAMQKYLRTTKQQPYHTMESILQHLEFCITHDMTPKAFLERYLAAGPTIQYHKERWL 456
Query: 468 IQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHFNISEEVIHPKSNRFVLRMS 527
+ W+L+ +E +T L++G VF L + + SL+ S +P F +SEE + PKS++FV+R+
Sbjct: 457 AKQWTLVSEEPVTNGLKDGIVFLLKRQDFSLVVSTKKVPFFKLSEEFVDPKSHKFVMRLQ 516
Query: 528 SETSV 532
SETSV
Sbjct: 517 SETSV 521
>sp|Q9ULK5|VANG2_HUMAN Vang-like protein 2 OS=Homo sapiens GN=VANGL2 PE=1 SV=2
Length = 521
Score = 335 bits (858), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 215/485 (44%), Positives = 310/485 (63%), Gaps = 27/485 (5%)
Query: 48 QDENWGENTTAVTGNTSEQSGSLEDLALWPGGNQETGLLFLCHRYIGSVFTGILSVISFL 107
+D+NWGE TT VT TSE S S +DL + E + C R++G L+++SFL
Sbjct: 64 RDDNWGETTTVVT-GTSEHSISHDDLTR-IAKDMEDSVPLDCSRHLGVAAGATLALLSFL 121
Query: 108 SPLLMLALPKLGVFSSVTSNLTSQQKAALLACGSECKGMLLSFTFKMILLAVGAWAVFLR 167
+ + + L CG+ C+G+ +S FK+++L +G+WA+F R
Sbjct: 122 T------------PLAFLLLPPLLWREELEPCGTACEGLFISVAFKLLILLLGSWALFFR 169
Query: 168 QPRATMPRIFIFRAIVVVFLFVCTIAYWLFFIVQMTEGARATVTGEDVLEYRVVVSYASS 227
+P+A++PR+F+ RA+++V +F+ ++YWLF+ V++ + + G VV +A S
Sbjct: 170 RPKASLPRVFVLRALLMVLVFLLVVSYWLFYGVRILDARERSYQG--------VVQFAVS 221
Query: 228 FVDALLFIHYITVVLIEIRHLQPAFYIKVTRSPDGDSKSYAIGQLSIQRAAVWVLQKYYT 287
VDALLF+HY+ VVL+E+R LQP F +KV RS DG S+ Y +G LSIQR AVW+L+KYY
Sbjct: 222 LVDALLFVHYLAVVLLELRQLQPQFTLKVVRSTDGASRFYNVGHLSIQRVAVWILEKYYH 281
Query: 288 EFSIYNPYLEKLPVSKSKKNHSHSSFKFYDVDGGFNNSTLQSGGECNRSVSNVHPRRRDS 347
+F +YNP L LP KS S FK Y + G NST S G+ ++ RRRD+
Sbjct: 282 DFPVYNPALLNLP--KSVLAKKVSGFKVYSL--GEENSTNNSTGQSRAVIAAAA-RRRDN 336
Query: 348 SHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGHQEPVVGGVPMDSYEAAQAVFP 407
SHNE +YEE ++ERRV+KRRARL+ A EEAFTHIKR +E MD EAAQA+F
Sbjct: 337 SHNEYYYEEAEHERRVRKRRARLVVAVEEAFTHIKRLQEEEQKNPREVMDPREAAQAIFA 396
Query: 408 SLARALQKYLRVTRQQPRHSVESILSHLAMCLSHDLSPRAFLEPFLIPAPVLQNEKEQKE 467
S+ARA+QKYLR T+QQP H++ESIL HL C++HD++P+AFLE +L P +Q KE+
Sbjct: 397 SMARAMQKYLRTTKQQPYHTMESILQHLEFCITHDMTPKAFLERYLAAGPTIQYHKERWL 456
Query: 468 IQSWSLICDELLTRPLQNGTVFQLLQNEVSLICSVHALPHFNISEEVIHPKSNRFVLRMS 527
+ W+L+ +E +T L++G VF L + + SL+ S +P F +SEE + PKS++FV+R+
Sbjct: 457 AKQWTLVSEEPVTNGLKDGIVFLLKRQDFSLVVSTKKVPFFKLSEEFVDPKSHKFVMRLQ 516
Query: 528 SETSV 532
SETSV
Sbjct: 517 SETSV 521
>sp|Q8BKF1|RPOM_MOUSE DNA-directed RNA polymerase, mitochondrial OS=Mus musculus
GN=Polrmt PE=2 SV=1
Length = 1207
Score = 36.2 bits (82), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%)
Query: 327 LQSGGECNRSVSNVHPRRRDSSHNERFYEEHDYERRVKKRRARLITATEEAFTHIKRTGH 386
L++ G V V R H+ R+ ++ + E+RVK+RR + + ++A T T H
Sbjct: 71 LRAEGTPEMRVKKVQVDRPPQGHSSRWAQKLEAEKRVKQRRQKEVDQQKQALTQEFWTLH 130
Query: 387 QEPVVGGVPMDSY 399
+EP + + Y
Sbjct: 131 KEPKIWNKKLAGY 143
>sp|Q9P244|LRFN1_HUMAN Leucine-rich repeat and fibronectin type III domain-containing
protein 1 OS=Homo sapiens GN=LRFN1 PE=1 SV=2
Length = 771
Score = 32.7 bits (73), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 37/91 (40%), Gaps = 20/91 (21%)
Query: 22 KMAPFQTAVTLDDNRDGEVIEVQILPQDENWGENTTAVTGNTSEQSGSLE-------DLA 74
+ A + V L + G + +LP +E GE + A G +SG+LE LA
Sbjct: 629 ETASAEPEVVLGRSLGGSATSLCLLPSEETSGEESRAAVGPRRSRSGALEPPTSAPPTLA 688
Query: 75 LWPGG-------------NQETGLLFLCHRY 92
L PGG + + G LF H Y
Sbjct: 689 LVPGGAAARPRPQQRYSFDGDYGALFQSHSY 719
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.134 0.392
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 186,706,528
Number of Sequences: 539616
Number of extensions: 7710675
Number of successful extensions: 18021
Number of sequences better than 100.0: 29
Number of HSP's better than 100.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 17968
Number of HSP's gapped (non-prelim): 29
length of query: 532
length of database: 191,569,459
effective HSP length: 122
effective length of query: 410
effective length of database: 125,736,307
effective search space: 51551885870
effective search space used: 51551885870
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 64 (29.3 bits)