BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7110
(86 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O15155|BET1_HUMAN BET1 homolog OS=Homo sapiens GN=BET1 PE=1 SV=1
Length = 118
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 43/63 (68%), Gaps = 1/63 (1%)
Query: 22 DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNS 81
G A +ENE+LT LR+K+ A+KSL+I+IG EVK QN+ LL MD FD T GFL +
Sbjct: 23 SGYSACEEENERLTESLRSKVTAIKSLSIEIGHEVKTQNK-LLAEMDSQFDSTTGFLGKT 81
Query: 82 MAR 84
M +
Sbjct: 82 MGK 84
>sp|Q62896|BET1_RAT BET1 homolog OS=Rattus norvegicus GN=Bet1 PE=1 SV=1
Length = 118
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 44/63 (69%), Gaps = 1/63 (1%)
Query: 22 DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNS 81
G +A +EN++LT LR+K+ A+KSL+I+IG EVK QN+ LL MD FD T GFL +
Sbjct: 23 SGYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKT 81
Query: 82 MAR 84
M R
Sbjct: 82 MGR 84
>sp|O35623|BET1_MOUSE BET1 homolog OS=Mus musculus GN=Bet1 PE=3 SV=1
Length = 118
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 44/62 (70%), Gaps = 1/62 (1%)
Query: 23 GGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSM 82
G +A +EN++LT LR+K+ A+KSL+I+IG EVK QN+ LL MD FD T GFL +M
Sbjct: 24 GYNACEEENDRLTESLRSKVTAIKSLSIEIGHEVKNQNK-LLAEMDSQFDSTTGFLGKTM 82
Query: 83 AR 84
R
Sbjct: 83 GR 84
>sp|O13932|BET1_SCHPO Protein transport protein bet1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=bet1 PE=3 SV=1
Length = 117
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 25 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
D++ EN++ S L K+++LK LT++IGTE+ + L+ M+D FD T L+ +M R
Sbjct: 28 DSLENENDERISKLTGKVKSLKELTMNIGTEIT-SSTKLMESMNDSFDSTKSLLSGTMTR 86
>sp|O35153|BET1L_MOUSE BET1-like protein OS=Mus musculus GN=Bet1l PE=3 SV=1
Length = 111
Score = 42.7 bits (99), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 25 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
D + +EN+++ L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 15 DILDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRY-LDGMDSDFTSVTGLLTGSVKR 73
>sp|O35152|BET1L_RAT BET1-like protein OS=Rattus norvegicus GN=Bet1l PE=1 SV=1
Length = 111
Score = 41.6 bits (96), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 27 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
+ +EN+++ L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 17 VDRENKRMADSLASKVTRLKSLALDIDRDTEDQNRY-LDGMDSDFTSVTGLLTGSVKR 73
>sp|Q5RBX2|BET1L_PONAB BET1-like protein OS=Pongo abelii GN=BET1L PE=3 SV=1
Length = 111
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 1/58 (1%)
Query: 27 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
+ +EN+++ +L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 17 LDRENKRMADNLASKVTRLKSLALDIDKDAEDQNRY-LDGMDSDFTSMTGLLTGSVKR 73
>sp|Q3MHP8|BET1L_BOVIN BET1-like protein OS=Bos taurus GN=BET1L PE=3 SV=1
Length = 111
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 1/58 (1%)
Query: 27 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
+ +EN+++ L +K+ LKSL +DI + + QN + L GMD DF G L S+ R
Sbjct: 17 LDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRY-LDGMDSDFTSMTGLLTGSVKR 73
>sp|Q68EL3|BET1L_DANRE BET1-like protein OS=Danio rerio GN=bet1l PE=3 SV=1
Length = 110
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 25 DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
D + EN+++ +L +K+ LKSL DI + + QN + L GMD +F G L S+ R
Sbjct: 14 DMLDAENKRMAENLASKVSRLKSLAYDIDKDAEEQNAY-LDGMDSNFLSATGLLTGSVKR 72
>sp|Q9NYM9|BET1L_HUMAN BET1-like protein OS=Homo sapiens GN=BET1L PE=1 SV=1
Length = 111
Score = 38.5 bits (88), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%), Gaps = 1/58 (1%)
Query: 27 IHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
+ +EN+++ L +K+ LKSL +DI + + QN + L GMD DF L S+ R
Sbjct: 17 LDRENKRMADSLASKVTRLKSLALDIDRDAEDQNRY-LDGMDSDFTSMTSLLTGSVKR 73
>sp|Q8K440|ABC8B_MOUSE ATP-binding cassette sub-family A member 8-B OS=Mus musculus
GN=Abca8b PE=2 SV=2
Length = 1620
Score = 34.3 bits (77), Expect = 0.23, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 5/46 (10%)
Query: 10 AGNYYEPVPNQFDGGDAIHQENEQLTSDLR---NKIQALKSLTIDI 52
+G+ +EPV +F G ++I N ++ + + NKI+ALK LT+DI
Sbjct: 462 SGDSFEPVSPEFHGKESIRIRN--ISKEYKGKPNKIEALKDLTLDI 505
>sp|Q9M2J9|BET11_ARATH Bet1-like SNARE 1-1 OS=Arabidopsis thaliana GN=BET11 PE=1 SV=1
Length = 122
Score = 34.3 bits (77), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 32/56 (57%), Gaps = 1/56 (1%)
Query: 29 QENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLNNSMAR 84
ENE+ L++++ LK L+ DI EV N L R M +D D + GFL+ +M R
Sbjct: 36 HENERALEGLQDRVILLKRLSGDINEEVDTHNRMLDR-MGNDMDSSRGFLSGTMDR 90
>sp|Q8K442|ABC8A_MOUSE ATP-binding cassette sub-family A member 8-A OS=Mus musculus
GN=Abca8a PE=2 SV=2
Length = 1620
Score = 33.9 bits (76), Expect = 0.34, Method: Composition-based stats.
Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 5/55 (9%)
Query: 1 MDNRMRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNK---IQALKSLTIDI 52
+DN + + + +EPV +F G +AI N LT D K +ALK LT+D+
Sbjct: 452 LDNETDYEFSDDSFEPVSMEFHGKEAIRIRN--LTKDYIQKSKRTEALKDLTLDV 504
>sp|Q9S7P9|SNP33_ARATH SNAP25 homologous protein SNAP33 OS=Arabidopsis thaliana GN=SNAP33
PE=1 SV=1
Length = 300
Score = 31.6 bits (70), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 38/77 (49%), Gaps = 10/77 (12%)
Query: 15 EPVPNQFDGGDAIHQENEQL---TSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMD--- 68
EP+P D + E + SDL + + LK++ +D+G+E++ QN +G+D
Sbjct: 222 EPLPESADAYQRVEMEKAKQDDGLSDLSDILGELKNMAVDMGSEIEKQN----KGLDHLH 277
Query: 69 DDFDRTGGFLNNSMARG 85
DD D + S RG
Sbjct: 278 DDVDELNFRVQQSNQRG 294
>sp|Q8N139|ABCA6_HUMAN ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6
PE=1 SV=2
Length = 1617
Score = 30.8 bits (68), Expect = 2.7, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 24/42 (57%), Gaps = 1/42 (2%)
Query: 12 NYYEPVPNQFDGGDAIHQEN-EQLTSDLRNKIQALKSLTIDI 52
+Y+EPV +F G +AI N ++ K++ALK L DI
Sbjct: 463 DYFEPVAPEFQGKEAIRIRNVKKEYKGKSGKVEALKGLLFDI 504
>sp|P32912|VAM7_YEAST Vacuolar morphogenesis protein 7 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=VAM7 PE=1 SV=1
Length = 316
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 29 QENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDFDRTGGFLN--NSMAR 84
++ EQ L IQA + L +++ E++ QNE LL ++DD D TG L N AR
Sbjct: 254 RDQEQELVALHRIIQAQRGLALEMNEELQTQNE-LLTALEDDVDNTGRRLQIANKKAR 310
>sp|Q9D0I6|WSDU1_MOUSE WD repeat, SAM and U-box domain-containing protein 1 OS=Mus
musculus GN=Wdsub1 PE=2 SV=1
Length = 474
Score = 29.6 bits (65), Expect = 5.5, Method: Composition-based stats.
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 19 NQFDGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLLRGMDDDF 71
N DG + +H E L DL+ + L+S + E++ + + L G+ D+F
Sbjct: 354 NNIDGKELLHLTKESLAGDLKIESLGLRSKVLRSIEELRAKMDSLSSGIPDEF 406
>sp|Q9HN70|THSA_HALSA Thermosome subunit alpha OS=Halobacterium salinarum (strain ATCC
700922 / JCM 11081 / NRC-1) GN=thsA PE=3 SV=2
Length = 562
Score = 29.6 bits (65), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 5 MRRQHAGNYYEPVPNQFDGGDAIHQENEQLTSDLRNKIQALKSLT 49
+R QH G E + ++G D I E+E + LR K QA++S T
Sbjct: 463 LRSQHDGGDTEAGLDAYNG-DVIDMESEGIVEPLRVKTQAIESAT 506
>sp|Q07657|SHS1_YEAST Seventh homolog of septin 1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SHS1 PE=1 SV=1
Length = 551
Score = 29.3 bits (64), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 17/76 (22%)
Query: 6 RRQHAGNYYEPVPNQF-DGGDAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 64
R Q +GN+ E N++ D G+ ENEQ S +R +G E+K +NE+L+
Sbjct: 388 RNQVSGNFKE---NEYEDNGEHDSAENEQEMSPVRQ-----------LGREIKQENENLI 433
Query: 65 RGMDDDFDRTGGFLNN 80
R + + + FLN+
Sbjct: 434 RSIKT--ESSPKFLNS 447
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.316 0.135 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 34,382,846
Number of Sequences: 539616
Number of extensions: 1201783
Number of successful extensions: 3239
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 11
Number of HSP's that attempted gapping in prelim test: 3215
Number of HSP's gapped (non-prelim): 26
length of query: 86
length of database: 191,569,459
effective HSP length: 56
effective length of query: 30
effective length of database: 161,350,963
effective search space: 4840528890
effective search space used: 4840528890
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 55 (25.8 bits)