RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7111
         (87 letters)



>d1u7la_ e.57.1.1 (A:) Vacuolar ATP synthase subunit C {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 388

 Score = 24.4 bits (53), Expect = 2.1
 Identities = 8/40 (20%), Positives = 15/40 (37%)

Query: 25  DAIHQENEQLTSDLRNKIQALKSLTIDIGTEVKYQNEHLL 64
             I  E+ QL +D+R       S   ++    + +   L 
Sbjct: 128 TLISNESSQLDADVRATYANYNSAKTNLAAAERKKTGDLS 167


>d2i00a1 d.106.1.4 (A:301-406) Putative acetyltransferase EF2353
          {Enterococcus faecalis [TaxId: 1351]}
          Length = 106

 Score = 22.9 bits (49), Expect = 5.5
 Identities = 8/29 (27%), Positives = 13/29 (44%)

Query: 20 QFDGGDAIHQENEQLTSDLRNKIQALKSL 48
           +D  D +   +E L + +   IQ L  L
Sbjct: 37 IWDENDQVTITDEPLGTAVHLDIQTLTCL 65


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.317    0.135    0.393 

Gapped
Lambda     K      H
   0.267   0.0620    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 320,238
Number of extensions: 12165
Number of successful extensions: 28
Number of sequences better than 10.0: 1
Number of HSP's gapped: 28
Number of HSP's successfully gapped: 5
Length of query: 87
Length of database: 2,407,596
Length adjustment: 52
Effective length of query: 35
Effective length of database: 1,693,636
Effective search space: 59277260
Effective search space used: 59277260
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 47 (22.1 bits)