Query psy7115
Match_columns 132
No_of_seqs 147 out of 1373
Neff 5.7
Searched_HMMs 29240
Date Fri Aug 16 18:32:29 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7115.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7115hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2l6l_A DNAJ homolog subfamily 99.9 1.4E-24 4.9E-29 161.1 7.9 90 1-95 58-148 (155)
2 2jr7_A DPH3 homolog; DESR1, CS 99.8 5E-22 1.7E-26 137.4 4.2 69 34-106 3-71 (89)
3 1yop_A KTI11P; zinc finger, me 99.8 5.2E-22 1.8E-26 135.8 2.9 63 34-100 3-65 (83)
4 1wge_A Hypothetical protein 26 99.8 2.9E-21 1E-25 132.1 3.5 64 33-100 9-72 (83)
5 2och_A Hypothetical protein DN 98.3 2.4E-07 8.2E-12 60.1 1.9 26 1-26 47-72 (73)
6 2yua_A Williams-beuren syndrom 98.3 2.8E-07 9.4E-12 63.3 2.1 28 1-28 59-86 (99)
7 2o37_A Protein SIS1; HSP40, J- 98.2 4.5E-07 1.5E-11 61.4 2.7 30 1-30 47-76 (92)
8 1hdj_A Human HSP40, HDJ-1; mol 98.2 5.8E-07 2E-11 58.7 3.0 28 1-28 44-71 (77)
9 2ej7_A HCG3 gene; HCG3 protein 98.2 4.2E-07 1.4E-11 59.9 1.9 27 1-27 52-78 (82)
10 2ctp_A DNAJ homolog subfamily 98.2 4.3E-07 1.5E-11 59.4 1.9 27 1-27 48-74 (78)
11 2ctq_A DNAJ homolog subfamily 98.2 4.6E-07 1.6E-11 63.5 2.1 29 1-29 62-90 (112)
12 2dn9_A DNAJ homolog subfamily 98.2 3.5E-07 1.2E-11 60.0 1.2 27 1-27 49-75 (79)
13 2cug_A Mkiaa0962 protein; DNAJ 98.1 7.5E-07 2.6E-11 59.8 1.7 27 1-27 58-84 (88)
14 2qsa_A DNAJ homolog DNJ-2; J-d 98.1 8.6E-07 2.9E-11 61.6 2.0 28 1-28 61-88 (109)
15 2ctr_A DNAJ homolog subfamily 98.1 7.9E-07 2.7E-11 59.7 1.5 29 1-29 48-76 (88)
16 2lgw_A DNAJ homolog subfamily 98.1 9.5E-07 3.3E-11 60.9 1.8 28 1-28 45-72 (99)
17 2dmx_A DNAJ homolog subfamily 98.1 1.1E-06 3.8E-11 59.2 1.6 28 1-28 52-79 (92)
18 2ctw_A DNAJ homolog subfamily 98.0 1.5E-06 5E-11 60.7 2.1 28 1-28 59-86 (109)
19 3uo3_A J-type CO-chaperone JAC 97.9 3.5E-06 1.2E-10 64.0 2.1 25 1-25 57-81 (181)
20 3hho_A CO-chaperone protein HS 97.9 3.3E-06 1.1E-10 63.5 1.8 28 1-28 53-80 (174)
21 1fpo_A HSC20, chaperone protei 97.9 3.6E-06 1.2E-10 63.3 1.7 28 1-28 50-77 (171)
22 3apq_A DNAJ homolog subfamily 97.9 5.5E-06 1.9E-10 61.8 2.4 28 1-28 44-71 (210)
23 1bq0_A DNAJ, HSP40; chaperone, 97.8 7.9E-07 2.7E-11 61.3 -2.2 29 1-29 45-73 (103)
24 3bvo_A CO-chaperone protein HS 97.8 5.5E-06 1.9E-10 64.1 1.8 28 1-28 92-119 (207)
25 2pf4_E Small T antigen; PP2A, 97.7 4.5E-06 1.5E-10 63.5 -0.7 26 1-26 51-76 (174)
26 3lz8_A Putative chaperone DNAJ 97.6 8.3E-06 2.9E-10 67.0 0.0 27 1-27 69-95 (329)
27 1gh6_A Large T antigen; tumor 97.4 1.1E-05 3.8E-10 57.1 -2.1 23 1-23 48-70 (114)
28 3apo_A DNAJ homolog subfamily 96.9 9.1E-05 3.1E-09 65.1 -0.9 28 1-28 63-90 (780)
29 2jr7_A DPH3 homolog; DESR1, CS 96.9 0.00071 2.4E-08 46.3 3.4 51 65-130 8-58 (89)
30 1wge_A Hypothetical protein 26 96.9 0.00088 3E-08 45.3 3.6 52 64-130 14-65 (83)
31 1yop_A KTI11P; zinc finger, me 96.8 0.00041 1.4E-08 46.9 1.7 38 78-130 21-58 (83)
32 1faf_A Large T antigen; J doma 96.6 0.00019 6.5E-09 47.3 -1.0 21 1-21 51-71 (79)
33 1iur_A KIAA0730 protein; DNAJ 94.0 0.0061 2.1E-07 41.0 -1.0 19 1-19 59-77 (88)
34 2l6l_A DNAJ homolog subfamily 91.6 0.14 4.7E-06 36.9 3.3 37 78-130 110-146 (155)
35 2e2z_A TIM15; protein import, 90.3 0.21 7.1E-06 34.7 3.0 36 51-90 10-48 (100)
36 4ayb_P DNA-directed RNA polyme 81.6 0.21 7.1E-06 30.3 -0.6 31 54-91 3-34 (48)
37 1qxf_A GR2, 30S ribosomal prot 54.3 15 0.00051 23.5 3.5 16 78-94 5-20 (66)
38 2avu_E Flagellar transcription 53.3 7.2 0.00025 29.7 2.3 34 51-91 131-165 (192)
39 3a43_A HYPD, hydrogenase nicke 51.8 12 0.00042 26.4 3.3 44 53-100 69-126 (139)
40 1zso_A Hypothetical protein; s 48.0 27 0.00094 25.6 4.7 10 78-87 68-77 (164)
41 2xzm_6 RPS27E; ribosome, trans 47.5 20 0.00068 23.7 3.5 17 78-95 30-46 (81)
42 3j20_W 30S ribosomal protein S 47.0 22 0.00075 22.4 3.5 19 77-96 12-30 (63)
43 1twf_L ABC10-alpha, DNA-direct 46.1 3.5 0.00012 26.4 -0.4 29 52-90 26-55 (70)
44 3h0g_L DNA-directed RNA polyme 42.7 4.1 0.00014 25.8 -0.5 29 53-91 20-49 (63)
45 1wee_A PHD finger family prote 40.8 21 0.00072 22.1 2.7 30 52-92 14-43 (72)
46 2lcq_A Putative toxin VAPC6; P 37.1 8.7 0.0003 27.4 0.5 30 51-91 129-159 (165)
47 3iz6_X 40S ribosomal protein S 29.1 28 0.00097 23.2 1.9 20 77-97 33-52 (86)
48 3u5c_b RP61, YS20, 40S ribosom 27.0 22 0.00076 23.5 1.1 18 78-96 32-49 (82)
49 1wg2_A Zinc finger (AN1-like) 24.5 29 0.00099 21.9 1.3 18 54-71 29-46 (64)
50 1wfh_A Zinc finger (AN1-like) 24.4 30 0.001 21.8 1.3 15 54-68 29-43 (64)
51 1qyp_A RNA polymerase II; tran 22.6 97 0.0033 18.1 3.4 34 54-90 15-53 (57)
52 1wff_A Riken cDNA 2810002D23 p 22.6 33 0.0011 22.8 1.3 15 54-68 40-54 (85)
53 1twf_I B12.6, DNA-directed RNA 21.7 66 0.0022 22.0 2.8 29 55-88 5-34 (122)
54 1wfp_A Zinc finger (AN1-like) 20.8 38 0.0013 22.0 1.3 15 54-68 39-53 (74)
55 1vq8_Z 50S ribosomal protein L 20.3 1E+02 0.0035 20.0 3.4 28 53-89 26-54 (83)
No 1
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.91 E-value=1.4e-24 Score=161.13 Aligned_cols=90 Identities=30% Similarity=0.647 Sum_probs=80.8
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhhhhhc-ccccccccccCcEEcCccceEeeeccCCCeEEEeeccccCCCCCCce
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQQQTH-MNIYKSVSLSDMEHKGESQMFTYPCRCGAEFCIEEQDTEGDGSDDNI 79 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~~~~~-~~~~d~v~LdDm~~~e~~~~~~~~CRCGg~f~It~edL~~G~~~~~~ 79 (132)
+|++|++||+||+||.+|+.||..+.....+. +.....+.+++|.+.++...|+++||||+.|.|++++|..| .
T Consensus 58 ~f~~i~~Ay~~L~dp~~R~~Yd~~~~~~~~~~~~~~~~~~~~~~m~~~e~~~~f~~~CrCG~~f~i~~~~l~~~-----~ 132 (155)
T 2l6l_A 58 KFIEIDQAWKILGNEETKREYDLQRCEDDLRNVGPVDAQVYLEEMSWNEGDHSFYLSCRCGGKYSVSKDEAEEV-----S 132 (155)
T ss_dssp HHHHHHHHHHHSSSHHHHCHHHHHHHHHHHHTTCSSSEEEETTTSEEETTTTEEEEECSSSCEEEEETTHHHHC-----C
T ss_pred HHHHHHHHHHHcCCHHHHHHHHHHcchhhccccccccceeeHHHhccccCCcEEEEcCCCCCeEEecHHHhCCC-----C
Confidence 48999999999999999999999998765443 56678889999999988889999999999999999999875 6
Q ss_pred EEECCCCCceEEEEec
Q psy7115 80 LIACDTCSLLLEITAR 95 (132)
Q Consensus 80 vv~C~sCSL~ikV~~~ 95 (132)
+|+|++||||++|+|.
T Consensus 133 ~v~C~sCSl~~~v~~~ 148 (155)
T 2l6l_A 133 LISCDTCSLIIELLHY 148 (155)
T ss_dssp EEECSSSSCEEEEECC
T ss_pred EEECCCCceEEEEEEc
Confidence 8999999999999986
No 2
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=99.85 E-value=5e-22 Score=137.41 Aligned_cols=69 Identities=25% Similarity=0.533 Sum_probs=61.2
Q ss_pred cccccccccCcEEcCccceEeeeccCCCeEEEeeccccCCCCCCceEEECCCCCceEEEEecCCcceeecccc
Q psy7115 34 NIYKSVSLSDMEHKGESQMFTYPCRCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLEITARCGAEFCIEEQD 106 (132)
Q Consensus 34 ~~~d~v~LdDm~~~e~~~~~~~~CRCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ikV~~~~~e~~~~~~~~ 106 (132)
.++++|+|+||.|+++++.|+||||||+.|.|++++|++| ..+++|++|||||+|+|+..+...++++.
T Consensus 3 ~vydeV~LeDm~~de~~~~y~ypCrCGd~F~IteedLe~g----e~iv~C~sCSL~IkV~y~~~~~~~~~~~~ 71 (89)
T 2jr7_A 3 VFHDEVEIEDFQYDEDSETYFYPCPCGDNFSITKEDLENG----EDVATCPSCSLIIKVIYDKDQFVSGETVP 71 (89)
T ss_dssp SCSCEEETTTSEEETTTTEEEEECTTSSEEEEEHHHHHHT----CCEEECTTTCCEEEEECCHHHHCCSSCCC
T ss_pred cceeEEEHHHcEEcCCCCEEEEcCCCCCEEEECHHHHhCC----CEEEECCCCccEEEEEEcccccccccccc
Confidence 4789999999999998889999999999999999999988 68999999999999999877765444433
No 3
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=99.84 E-value=5.2e-22 Score=135.80 Aligned_cols=63 Identities=32% Similarity=0.645 Sum_probs=58.6
Q ss_pred cccccccccCcEEcCccceEeeeccCCCeEEEeeccccCCCCCCceEEECCCCCceEEEEecCCcce
Q psy7115 34 NIYKSVSLSDMEHKGESQMFTYPCRCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLEITARCGAEF 100 (132)
Q Consensus 34 ~~~d~v~LdDm~~~e~~~~~~~~CRCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ikV~~~~~e~~ 100 (132)
.++++|+|+||.|+++++.|+||||||+.|.|++++|.+| ..+++|++|||||+|+|...+..
T Consensus 3 ~~~dev~leDm~~de~~~~y~ypCrCGd~F~it~edL~~g----e~iv~C~sCSL~I~V~~~~~d~~ 65 (83)
T 1yop_A 3 STYDEIEIEDMTFEPENQMFTYPCPCGDRFQIYLDDMFEG----EKVAVCPSCSLMIDVVFDKEDLA 65 (83)
T ss_dssp SCSBCCBGGGSEEETTTTEEEEEETTTEEEEEEHHHHHTT----CCEEECSSSCCEEECBCCSSHHH
T ss_pred ceeeEEEHHHcEEcCCCCEEEEeCCCCCeEEECHHHHhCC----CEEEECCCCccEEEEEEcccccc
Confidence 3789999999999998889999999999999999999988 78999999999999999887764
No 4
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=99.82 E-value=2.9e-21 Score=132.09 Aligned_cols=64 Identities=25% Similarity=0.596 Sum_probs=58.9
Q ss_pred ccccccccccCcEEcCccceEeeeccCCCeEEEeeccccCCCCCCceEEECCCCCceEEEEecCCcce
Q psy7115 33 MNIYKSVSLSDMEHKGESQMFTYPCRCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLEITARCGAEF 100 (132)
Q Consensus 33 ~~~~d~v~LdDm~~~e~~~~~~~~CRCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ikV~~~~~e~~ 100 (132)
..++++|+|+||.|+++...|+||||||+.|.|++++|++| ..+++|++|||||||+|+..+..
T Consensus 9 ~~~~dev~LeDm~~de~~~~y~y~CrCGd~F~it~edL~~g----e~iv~C~sCSL~I~V~~~~~~~~ 72 (83)
T 1wge_A 9 AVFHDEVEIEDFQYDEDSETYFYPCPCGDNFAITKEDLENG----EDVATCPSCSLIIKVIYDKDQFM 72 (83)
T ss_dssp CCCSCEEEGGGSCCBTTTTEEEECCSSSSCEEEEHHHHHTT----CCEEECTTTCCEEEEECCHHHHH
T ss_pred ceeeEEEEHHHceEccCCCEEEEeCCCCCEEEECHHHHhCC----CEEEECCCCceEEEEEecccccc
Confidence 46889999999999988889999999999999999999988 78999999999999999876654
No 5
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=98.28 E-value=2.4e-07 Score=60.07 Aligned_cols=26 Identities=35% Similarity=0.652 Sum_probs=23.3
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLL 26 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~ 26 (132)
+|++|++||+||+||.+|+.||..+.
T Consensus 47 ~f~~i~~Ay~~L~d~~~R~~YD~~g~ 72 (73)
T 2och_A 47 QFKQISQAYEVLSDEKKRQIYDQGGE 72 (73)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHHTC-
T ss_pred HHHHHHHHHHHHCCHHHHHHHHhcCC
Confidence 48999999999999999999998764
No 6
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.27 E-value=2.8e-07 Score=63.28 Aligned_cols=28 Identities=32% Similarity=0.561 Sum_probs=25.2
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 59 ~f~~i~~Ay~~L~d~~~R~~YD~~l~~~ 86 (99)
T 2yua_A 59 RFTRISQAYVVLGSATLRRKYDRGLLSD 86 (99)
T ss_dssp HHHHHHHHHHHTTSHHHHHHHHHTCCCH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHhcccc
Confidence 4899999999999999999999977643
No 7
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=98.24 E-value=4.5e-07 Score=61.44 Aligned_cols=30 Identities=33% Similarity=0.605 Sum_probs=26.8
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQQQ 30 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~~~ 30 (132)
+|++|++||+||+||.+|+.||..+.....
T Consensus 47 ~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~ 76 (92)
T 2o37_A 47 KFKEISEAFEILNDPQKREIYDQYGLEAAR 76 (92)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHHHCHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHCHHHhh
Confidence 489999999999999999999998876644
No 8
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=98.23 E-value=5.8e-07 Score=58.67 Aligned_cols=28 Identities=25% Similarity=0.508 Sum_probs=25.1
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||++|+||.+|+.||..+...
T Consensus 44 ~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 71 (77)
T 1hdj_A 44 KFKEIAEAYDVLSDPRKREIFDRYGEEG 71 (77)
T ss_dssp HHHHHHHHHHHTTCHHHHHHHHHTCGGG
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHcccc
Confidence 4899999999999999999999887654
No 9
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.20 E-value=4.2e-07 Score=59.93 Aligned_cols=27 Identities=30% Similarity=0.560 Sum_probs=24.3
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLS 27 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~ 27 (132)
+|++|++||++|+||.+|+.||..+..
T Consensus 52 ~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 78 (82)
T 2ej7_A 52 RFKQVAEAYEVLSDAKKRDIYDRYGSG 78 (82)
T ss_dssp HHHHHHHHHHHHSSTTHHHHHHHTCCC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 489999999999999999999987643
No 10
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=4.3e-07 Score=59.45 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=24.4
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLS 27 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~ 27 (132)
+|++|++||+||+||.+|+.||..+..
T Consensus 48 ~f~~i~~Ay~~L~d~~~R~~YD~~~~~ 74 (78)
T 2ctp_A 48 AFKAIGTAYAVLSNPEKRKQYDQFGSG 74 (78)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHHTCSC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHcCcc
Confidence 489999999999999999999987754
No 11
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.20 E-value=4.6e-07 Score=63.53 Aligned_cols=29 Identities=34% Similarity=0.426 Sum_probs=26.2
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQQ 29 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~~ 29 (132)
+|++|++||+||+||.+|+.||+.+....
T Consensus 62 ~f~~i~~Ay~vL~d~~~R~~YD~~~~~~~ 90 (112)
T 2ctq_A 62 TFQKLQKAKEILTNEESRARYDHWRRSQM 90 (112)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHhhhhcc
Confidence 48999999999999999999999887653
No 12
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=98.19 E-value=3.5e-07 Score=59.96 Aligned_cols=27 Identities=33% Similarity=0.539 Sum_probs=24.4
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLS 27 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~ 27 (132)
+|++|++||+||+||.+|+.||..+..
T Consensus 49 ~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 75 (79)
T 2dn9_A 49 KFSQLAEAYEVLSDEVKRKQYDAYGSG 75 (79)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHSCCC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHhccCc
Confidence 489999999999999999999987653
No 13
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=98.12 E-value=7.5e-07 Score=59.78 Aligned_cols=27 Identities=30% Similarity=0.540 Sum_probs=24.5
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLS 27 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~ 27 (132)
+|++|++||++|+||.+|+.||..+..
T Consensus 58 ~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 84 (88)
T 2cug_A 58 RFIQISKAYEILSNEEKRTNYDHYGSG 84 (88)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHcCCC
Confidence 489999999999999999999987754
No 14
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=98.11 E-value=8.6e-07 Score=61.60 Aligned_cols=28 Identities=29% Similarity=0.405 Sum_probs=25.3
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 61 ~f~~i~~AY~~L~d~~~R~~YD~~~~~~ 88 (109)
T 2qsa_A 61 RFRVIATAYETLKDDEAKTNYDYYLDHP 88 (109)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHhccCc
Confidence 4899999999999999999999988643
No 15
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.10 E-value=7.9e-07 Score=59.66 Aligned_cols=29 Identities=34% Similarity=0.430 Sum_probs=25.9
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQQ 29 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~~ 29 (132)
+|++|++||++|+||.+|+.||..+....
T Consensus 48 ~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~ 76 (88)
T 2ctr_A 48 KFREIAEAYETLSDANRRKEYDTLGHSAF 76 (88)
T ss_dssp HHHHHHHHHHHHHSSHHHHHHHHTCHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHhCcccc
Confidence 48999999999999999999999886543
No 16
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=98.09 E-value=9.5e-07 Score=60.92 Aligned_cols=28 Identities=25% Similarity=0.516 Sum_probs=24.9
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 45 ~f~~I~~AY~vL~d~~~R~~YD~~g~~~ 72 (99)
T 2lgw_A 45 KFKEVAEAYEVLSDKHKREIYDRYGREG 72 (99)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999987654
No 17
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.06 E-value=1.1e-06 Score=59.22 Aligned_cols=28 Identities=32% Similarity=0.555 Sum_probs=25.1
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 52 ~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~ 79 (92)
T 2dmx_A 52 KFKLVSEAYEVLSDSKKRSLYDRAGCDS 79 (92)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHCSCS
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHhCccc
Confidence 4899999999999999999999887544
No 18
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=98.05 E-value=1.5e-06 Score=60.72 Aligned_cols=28 Identities=32% Similarity=0.434 Sum_probs=25.3
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 59 ~f~~i~~Ay~vL~d~~~R~~YD~~g~~~ 86 (109)
T 2ctw_A 59 KFKEINNAHAILTDATKRNIYDKYGSLG 86 (109)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHHHHcCHHHHHHHHHhcccc
Confidence 4899999999999999999999877654
No 19
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=97.91 E-value=3.5e-06 Score=64.04 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=24.0
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQL 25 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l 25 (132)
+|++|++||+||+||.+|+.||..+
T Consensus 57 ~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 57 QSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp GGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHH
Confidence 5999999999999999999999988
No 20
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=97.90 E-value=3.3e-06 Score=63.54 Aligned_cols=28 Identities=32% Similarity=0.350 Sum_probs=25.3
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 53 ~f~~In~AY~vL~dp~~R~~Yd~~l~g~ 80 (174)
T 3hho_A 53 QAAQINDAYQTLKDPLRRAEYLLSLQGI 80 (174)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHcChHHHHHHHHHccCC
Confidence 4899999999999999999999988643
No 21
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=97.88 E-value=3.6e-06 Score=63.27 Aligned_cols=28 Identities=29% Similarity=0.338 Sum_probs=25.3
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 50 ~f~~In~AY~vL~dp~~R~~Yd~~l~g~ 77 (171)
T 1fpo_A 50 QSATINQAWQTLRHPLMRAEYLLSLHGF 77 (171)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHcCchHHHHHHHHhcCC
Confidence 4899999999999999999999988644
No 22
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=97.85 E-value=5.5e-06 Score=61.83 Aligned_cols=28 Identities=46% Similarity=0.592 Sum_probs=25.5
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||++|+||.+|+.||+.+...
T Consensus 44 ~f~~i~~Ay~~L~~~~~r~~yd~~~~~~ 71 (210)
T 3apq_A 44 DFLKINRAYEVLKDEDLRKKYDKYGEKG 71 (210)
T ss_dssp HHHHHHHHHHHHTSHHHHHHHHHHTTTT
T ss_pred HHHHHHHHHHHhCCHHHHHHHHHhcccc
Confidence 4899999999999999999999988654
No 23
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=97.85 E-value=7.9e-07 Score=61.28 Aligned_cols=29 Identities=28% Similarity=0.454 Sum_probs=25.8
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQQ 29 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~~ 29 (132)
+|++|++||+||+||.+|+.||..+....
T Consensus 45 ~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 73 (103)
T 1bq0_A 45 KFKEIKEAYEVLTDSQKRAAYDQYGHAAF 73 (103)
T ss_dssp HHHHHTTTTTSTTCSHHHHHTTTSTTTSS
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHhhhhh
Confidence 48999999999999999999999886543
No 24
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=97.81 E-value=5.5e-06 Score=64.15 Aligned_cols=28 Identities=25% Similarity=0.247 Sum_probs=24.8
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||+||+||.+|+.||..+...
T Consensus 92 ~f~~In~AY~vLsdp~~R~~Yd~~l~G~ 119 (207)
T 3bvo_A 92 HSTLVNDAYKTLLAPLSRGLYLLKLHGI 119 (207)
T ss_dssp HHHHHHHHHHHHHSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHhcCC
Confidence 4899999999999999999999877643
No 25
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=97.67 E-value=4.5e-06 Score=63.45 Aligned_cols=26 Identities=12% Similarity=-0.006 Sum_probs=24.0
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLL 26 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~ 26 (132)
+|++|++||+||+||.+|+.||+.+.
T Consensus 51 ~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 51 KMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp TTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred HHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 59999999999999999999998664
No 26
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=97.61 E-value=8.3e-06 Score=66.98 Aligned_cols=27 Identities=37% Similarity=0.694 Sum_probs=0.0
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLS 27 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~ 27 (132)
+|++|++||+||+||.+|+.||+.+..
T Consensus 69 ~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 69 KFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp ---------------------------
T ss_pred HHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 599999999999999999999997543
No 27
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=97.35 E-value=1.1e-05 Score=57.12 Aligned_cols=23 Identities=13% Similarity=0.157 Sum_probs=21.7
Q ss_pred ChhhHHHHHHhcCChhHHHHHHH
Q psy7115 1 MFLKINEAWNILKDEKERKLYES 23 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~ 23 (132)
+|++|++||+||+||.+|+.||.
T Consensus 48 ~f~~I~~AYevL~d~~~R~~~~~ 70 (114)
T 1gh6_A 48 KMKKMNTLYKKMEDGVKYAHQPD 70 (114)
T ss_dssp TTHHHHHHHHHHHHHHHSCCSSC
T ss_pred HHHHHHHHHHHHCCHHHHHHhhh
Confidence 69999999999999999999985
No 28
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=96.95 E-value=9.1e-05 Score=65.09 Aligned_cols=28 Identities=46% Similarity=0.592 Sum_probs=18.7
Q ss_pred ChhhHHHHHHhcCChhHHHHHHHHhhhh
Q psy7115 1 MFLKINEAWNILKDEKERKLYESQLLSQ 28 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~YD~~l~~~ 28 (132)
+|++|++||++|+||.+|+.||+.+...
T Consensus 63 ~f~~i~~ay~~L~~~~~r~~yd~~~~~~ 90 (780)
T 3apo_A 63 DFLKINRAYEVLKDEDLRKKYDKYGEKG 90 (780)
T ss_dssp -----CTHHHHHHSHHHHHHHTTC----
T ss_pred HHHHHHHHHHHHcChHHHHHHHhhcccc
Confidence 5899999999999999999999987644
No 29
>2jr7_A DPH3 homolog; DESR1, CSL zinc finger, metal binding protein; NMR {Homo sapiens}
Probab=96.88 E-value=0.00071 Score=46.30 Aligned_cols=51 Identities=24% Similarity=0.504 Sum_probs=31.1
Q ss_pred EeeccccCCCCCCceEEECCCCCceEEEEecCCcceeeccccccCCCCCccEEEEcCCceeeEEEe
Q psy7115 65 IEEQDTEGDGSDDNILIACDTCSLLLEITARCGAEFCIEEQDTKGDSSEGNILIACDTCSLLLEIT 130 (132)
Q Consensus 65 It~edL~~G~~~~~~vv~C~sCSL~ikV~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (132)
|..++|.-........-+|+ |.-...|.-... ++ |.++++|++|||.|+|.
T Consensus 8 V~LeDm~~de~~~~y~ypCr-CGd~F~IteedL---------e~-----ge~iv~C~sCSL~IkV~ 58 (89)
T 2jr7_A 8 VEIEDFQYDEDSETYFYPCP-CGDNFSITKEDL---------EN-----GEDVATCPSCSLIIKVI 58 (89)
T ss_dssp EETTTSEEETTTTEEEEECT-TSSEEEEEHHHH---------HH-----TCCEEECTTTCCEEEEE
T ss_pred EEHHHcEEcCCCCEEEEcCC-CCCEEEECHHHH---------hC-----CCEEEECCCCccEEEEE
Confidence 34455442211235688998 977654443221 11 34699999999999985
No 30
>1wge_A Hypothetical protein 2610018L09RIK; diphthamide,CSL zinc finger, ADP-ribosylating toxin, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.41.17.1
Probab=96.86 E-value=0.00088 Score=45.27 Aligned_cols=52 Identities=23% Similarity=0.475 Sum_probs=32.9
Q ss_pred EEeeccccCCCCCCceEEECCCCCceEEEEecCCcceeeccccccCCCCCccEEEEcCCceeeEEEe
Q psy7115 64 CIEEQDTEGDGSDDNILIACDTCSLLLEITARCGAEFCIEEQDTKGDSSEGNILIACDTCSLLLEIT 130 (132)
Q Consensus 64 ~It~edL~~G~~~~~~vv~C~sCSL~ikV~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (132)
.|..++|.-.........+|+ |.-...|.-... + .|.+++.|++|||.|+|.
T Consensus 14 ev~LeDm~~de~~~~y~y~Cr-CGd~F~it~edL---------~-----~ge~iv~C~sCSL~I~V~ 65 (83)
T 1wge_A 14 EVEIEDFQYDEDSETYFYPCP-CGDNFAITKEDL---------E-----NGEDVATCPSCSLIIKVI 65 (83)
T ss_dssp EEEGGGSCCBTTTTEEEECCS-SSSCEEEEHHHH---------H-----TTCCEEECTTTCCEEEEE
T ss_pred EEEHHHceEccCCCEEEEeCC-CCCEEEECHHHH---------h-----CCCEEEECCCCceEEEEE
Confidence 455666653222235688998 976654443221 1 134699999999999985
No 31
>1yop_A KTI11P; zinc finger, metal binding protein; NMR {Saccharomyces cerevisiae} SCOP: g.41.17.1 PDB: 1yws_A
Probab=96.82 E-value=0.00041 Score=46.92 Aligned_cols=38 Identities=24% Similarity=0.531 Sum_probs=26.8
Q ss_pred ceEEECCCCCceEEEEecCCcceeeccccccCCCCCccEEEEcCCceeeEEEe
Q psy7115 78 NILIACDTCSLLLEITARCGAEFCIEEQDTKGDSSEGNILIACDTCSLLLEIT 130 (132)
Q Consensus 78 ~~vv~C~sCSL~ikV~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (132)
....+|+ |+-...|.-... + .|.+++.|++|||.|+|.
T Consensus 21 ~y~ypCr-CGd~F~it~edL---------~-----~ge~iv~C~sCSL~I~V~ 58 (83)
T 1yop_A 21 MFTYPCP-CGDRFQIYLDDM---------F-----EGEKVAVCPSCSLMIDVV 58 (83)
T ss_dssp EEEEEET-TTEEEEEEHHHH---------H-----TTCCEEECSSSCCEEECB
T ss_pred EEEEeCC-CCCeEEECHHHH---------h-----CCCEEEECCCCccEEEEE
Confidence 5678998 985554443221 1 246899999999999874
No 32
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=96.64 E-value=0.00019 Score=47.31 Aligned_cols=21 Identities=19% Similarity=0.379 Sum_probs=18.9
Q ss_pred ChhhHHHHHHhcCChhHHHHH
Q psy7115 1 MFLKINEAWNILKDEKERKLY 21 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~~Y 21 (132)
+|++|++||++|+||.+|..+
T Consensus 51 ~f~~i~~AYe~L~~~~~r~~~ 71 (79)
T 1faf_A 51 LMQELNSLWGTFKTEVYNLRM 71 (79)
T ss_dssp HHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhHHHHHHH
Confidence 499999999999999999764
No 33
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=93.98 E-value=0.0061 Score=40.95 Aligned_cols=19 Identities=16% Similarity=0.221 Sum_probs=16.8
Q ss_pred ChhhHHHHHHhcCChhHHH
Q psy7115 1 MFLKINEAWNILKDEKERK 19 (132)
Q Consensus 1 kF~~I~eAyevLsdp~~R~ 19 (132)
+|++|++||+||+|+..|.
T Consensus 59 ~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 59 VFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp HHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHhhcccc
Confidence 4999999999999998773
No 34
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=91.64 E-value=0.14 Score=36.93 Aligned_cols=37 Identities=35% Similarity=0.754 Sum_probs=25.3
Q ss_pred ceEEECCCCCceEEEEecCCcceeeccccccCCCCCccEEEEcCCceeeEEEe
Q psy7115 78 NILIACDTCSLLLEITARCGAEFCIEEQDTKGDSSEGNILIACDTCSLLLEIT 130 (132)
Q Consensus 78 ~~vv~C~sCSL~ikV~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 130 (132)
....+|+ |...-.|.. ++. + .| +++.|.+|||.|+|.
T Consensus 110 ~f~~~Cr-CG~~f~i~~---~~l--~----~~------~~v~C~sCSl~~~v~ 146 (155)
T 2l6l_A 110 SFYLSCR-CGGKYSVSK---DEA--E----EV------SLISCDTCSLIIELL 146 (155)
T ss_dssp EEEEECS-SSCEEEEET---THH--H----HC------CEEECSSSSCEEEEE
T ss_pred EEEEcCC-CCCeEEecH---HHh--C----CC------CEEECCCCceEEEEE
Confidence 5678998 986644332 111 1 11 899999999999875
No 35
>2e2z_A TIM15; protein import, zinc finger, protein transport, chaperone regulator; NMR {Saccharomyces cerevisiae}
Probab=90.31 E-value=0.21 Score=34.69 Aligned_cols=36 Identities=25% Similarity=0.705 Sum_probs=29.9
Q ss_pred ceEeeec-cCCCe--EEEeeccccCCCCCCceEEECCCCCceE
Q psy7115 51 QMFTYPC-RCGAE--FCIEEQDTEGDGSDDNILIACDTCSLLL 90 (132)
Q Consensus 51 ~~~~~~C-RCGg~--f~It~edL~~G~~~~~~vv~C~sCSL~i 90 (132)
....+.| .|+.. -.|+....+.| .++|+|++|.-+=
T Consensus 10 ~~l~FTC~~C~tRs~k~iSk~aY~~G----vViv~C~gC~n~H 48 (100)
T 2e2z_A 10 MMIAFTCKKCNTRSSHTMSKQAYEKG----TVLISCPHCKVRH 48 (100)
T ss_dssp EEEEEEETTTTEEEEEEEEHHHHHTS----EEEEECTTTCCEE
T ss_pred EEEEEEccCCCCcchhhcCHHHhhCC----EEEEEcCCCccce
Confidence 3578999 99974 88888888888 8999999999763
No 36
>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X
Probab=81.56 E-value=0.21 Score=30.30 Aligned_cols=31 Identities=19% Similarity=0.508 Sum_probs=19.9
Q ss_pred eeec-cCCCeEEEeeccccCCCCCCceEEECCCCCceEE
Q psy7115 54 TYPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLE 91 (132)
Q Consensus 54 ~~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ik 91 (132)
.|.| |||-.| +.++|+.- .-+-|+-|...|-
T Consensus 3 iY~C~rCg~~f--s~~el~~l-----P~IrCpyCGyrii 34 (48)
T 4ayb_P 3 VYRCGKCWKTF--TDEQLKVL-----PGVRCPYCGYKII 34 (48)
T ss_dssp --CCCCTTTTC--CCCCSCCC-----SSSCCTTTCCSCE
T ss_pred EEEeeccCCCc--cHHHHhhC-----CCcccCccCcEEE
Confidence 5789 999988 44555431 2367999987654
No 37
>1qxf_A GR2, 30S ribosomal protein S27E; structural genomics, beta sheet, PSI, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: g.41.8.4
Probab=54.25 E-value=15 Score=23.46 Aligned_cols=16 Identities=13% Similarity=0.424 Sum_probs=10.3
Q ss_pred ceEEECCCCCceEEEEe
Q psy7115 78 NILIACDTCSLLLEITA 94 (132)
Q Consensus 78 ~~vv~C~sCSL~ikV~~ 94 (132)
.+-|.|++|. .+.++|
T Consensus 5 Fm~VKCp~C~-niq~VF 20 (66)
T 1qxf_A 5 FVKVKCPDCE-HEQVIF 20 (66)
T ss_dssp EEEEECTTTC-CEEEEE
T ss_pred eEEEECCCCC-CceEEE
Confidence 4667777774 456666
No 38
>2avu_E Flagellar transcriptional activator FLHC; C4-type zinc finger, transcription activator; 3.00A {Escherichia coli} SCOP: e.64.1.1
Probab=53.33 E-value=7.2 Score=29.68 Aligned_cols=34 Identities=24% Similarity=0.561 Sum_probs=23.0
Q ss_pred ceEeeec-cCCCeEEEeeccccCCCCCCceEEECCCCCceEE
Q psy7115 51 QMFTYPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLE 91 (132)
Q Consensus 51 ~~~~~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ik 91 (132)
..-..+| +||+.|+....++... +.|+=|..-=|
T Consensus 131 ~L~l~~C~~Cgg~fv~~~~~~~~~-------f~Cp~C~~psR 165 (192)
T 2avu_E 131 LLQLSSCNCCGGNFITHAHQPVGS-------FACSLCQPPSR 165 (192)
T ss_dssp SEEEEECTTTCCEEEEESSCCSSC-------CCCTTC-----
T ss_pred ceeeCcCCCCCCCeeCccCCCCCC-------CcCCCCCCccc
Confidence 3456789 9999999999885554 56888875443
No 39
>3a43_A HYPD, hydrogenase nickel incorporation protein HYPA; [NIFE] hydrogenase maturation, zinc-finger, nickel binding, metal-binding; HET: FME; 2.30A {Pyrococcus kodakaraensis} PDB: 3a44_A*
Probab=51.77 E-value=12 Score=26.45 Aligned_cols=44 Identities=20% Similarity=0.511 Sum_probs=27.1
Q ss_pred Eeeec-cCCCeEEEee--ccccCCCCCCce----------EEECCCCC-ceEEEEecCCcce
Q psy7115 53 FTYPC-RCGAEFCIEE--QDTEGDGSDDNI----------LIACDTCS-LLLEITARCGAEF 100 (132)
Q Consensus 53 ~~~~C-RCGg~f~It~--edL~~G~~~~~~----------vv~C~sCS-L~ikV~~~~~e~~ 100 (132)
-...| .||..|.+.. ++|..-. ... ...||.|. ..++|.. |.|.
T Consensus 69 ~~~~C~~CG~~~~~~~~~~~~~~~~--~~~~h~~p~~~~~~~~CP~Cgs~~~~i~~--G~el 126 (139)
T 3a43_A 69 AVFKCRNCNYEWKLKEVKDKFDERI--KEDIHFIPEVVHAFLACPKCGSHDFEVVK--GRGV 126 (139)
T ss_dssp CEEEETTTCCEEEGGGCTTCCSCCC--GGGCCCCGGGCGGGCSCSSSSCCCEEEEE--SSCE
T ss_pred CcEECCCCCCEEecccccccccccc--cccccccccccccCCcCccccCCccEEec--CCeE
Confidence 35779 8999998866 2333221 122 57899995 4466665 4444
No 40
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=47.96 E-value=27 Score=25.64 Aligned_cols=10 Identities=20% Similarity=0.335 Sum_probs=5.0
Q ss_pred ceEEECCCCC
Q psy7115 78 NILIACDTCS 87 (132)
Q Consensus 78 ~~vv~C~sCS 87 (132)
+.+.-|..|+
T Consensus 68 Nfv~KCk~C~ 77 (164)
T 1zso_A 68 NFMIKWTEYP 77 (164)
T ss_dssp SEEECCSSSS
T ss_pred eEEEeccccC
Confidence 4455555554
No 41
>2xzm_6 RPS27E; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_6
Probab=47.54 E-value=20 Score=23.72 Aligned_cols=17 Identities=12% Similarity=0.430 Sum_probs=9.6
Q ss_pred ceEEECCCCCceEEEEec
Q psy7115 78 NILIACDTCSLLLEITAR 95 (132)
Q Consensus 78 ~~vv~C~sCSL~ikV~~~ 95 (132)
.+-|.|++|. .+.|+|.
T Consensus 30 Fm~VkCp~C~-n~q~VFS 46 (81)
T 2xzm_6 30 FMDVKCAQCQ-NIQMIFS 46 (81)
T ss_dssp EEEEECSSSC-CEEEEET
T ss_pred EEEeECCCCC-CeeEEEe
Confidence 4566666663 3455553
No 42
>3j20_W 30S ribosomal protein S27E; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=47.05 E-value=22 Score=22.43 Aligned_cols=19 Identities=16% Similarity=0.275 Sum_probs=12.3
Q ss_pred CceEEECCCCCceEEEEecC
Q psy7115 77 DNILIACDTCSLLLEITARC 96 (132)
Q Consensus 77 ~~~vv~C~sCSL~ikV~~~~ 96 (132)
+.+-|.|++|. .+.++|.+
T Consensus 12 ~Fm~VkCp~C~-~~q~VFSh 30 (63)
T 3j20_W 12 RFLRVKCIDCG-NEQIVFSH 30 (63)
T ss_dssp CEEEEECSSSC-CEEEEESS
T ss_pred cEEEEECCCCC-CeeEEEec
Confidence 45778888884 45666743
No 43
>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...
Probab=46.07 E-value=3.5 Score=26.45 Aligned_cols=29 Identities=17% Similarity=0.671 Sum_probs=20.9
Q ss_pred eEeeec-cCCCeEEEeeccccCCCCCCceEEECCCCCceE
Q psy7115 52 MFTYPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSLLL 90 (132)
Q Consensus 52 ~~~~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL~i 90 (132)
.+.|.| +||..|.+... ..+.|+.|.-+|
T Consensus 26 ~v~Y~C~~CG~~~e~~~~----------d~irCp~CG~RI 55 (70)
T 1twf_L 26 TLKYICAECSSKLSLSRT----------DAVRCKDCGHRI 55 (70)
T ss_dssp CCCEECSSSCCEECCCTT----------STTCCSSSCCCC
T ss_pred eEEEECCCCCCcceeCCC----------CCccCCCCCceE
Confidence 467899 99998877521 234799998654
No 44
>3h0g_L DNA-directed RNA polymerases I, II, and III subunit rpabc4; transcription, multi-protein complex, DNA- binding, magnesium; 3.65A {Schizosaccharomyces pombe}
Probab=42.72 E-value=4.1 Score=25.77 Aligned_cols=29 Identities=31% Similarity=0.727 Sum_probs=21.0
Q ss_pred Eeeec-cCCCeEEEeeccccCCCCCCceEEECCCCCceEE
Q psy7115 53 FTYPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLE 91 (132)
Q Consensus 53 ~~~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ik 91 (132)
..|.| +||..+.|. . ...+.|+.|.-+|-
T Consensus 20 v~Y~C~~Cg~~~~l~-----~-----~~~iRC~~CG~RIL 49 (63)
T 3h0g_L 20 MIYLCADCGARNTIQ-----A-----KEVIRCRECGHRVM 49 (63)
T ss_dssp CCCBCSSSCCBCCCC-----S-----SSCCCCSSSCCCCC
T ss_pred eEEECCCCCCeeecC-----C-----CCceECCCCCcEEE
Confidence 57999 999777644 2 23578999997653
No 45
>1wee_A PHD finger family protein; structural genomics, PHD domain, riken structural genomics/proteomics initiative, RSGI, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.50.1.2
Probab=40.81 E-value=21 Score=22.13 Aligned_cols=30 Identities=23% Similarity=0.719 Sum_probs=20.3
Q ss_pred eEeeeccCCCeEEEeeccccCCCCCCceEEECCCCCceEEE
Q psy7115 52 MFTYPCRCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLEI 92 (132)
Q Consensus 52 ~~~~~CRCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ikV 92 (132)
.....|-|+..+ ..| ...|+|+.|..|.+.
T Consensus 14 ~~~~~C~C~~~~-------~~g----~~mI~Cd~C~~W~H~ 43 (72)
T 1wee_A 14 NWKVDCKCGTKD-------DDG----ERMLACDGCGVWHHT 43 (72)
T ss_dssp SSEECCTTCCCS-------CCS----SCEEECSSSCEEEET
T ss_pred CcceEeeCCCcc-------CCC----CcEEECCCCCCccCC
Confidence 456778888542 123 568999999877553
No 46
>2lcq_A Putative toxin VAPC6; PIN domain, Zn ribbon domain, ribosome biogenesis, metal BIN protein; NMR {Pyrococcus horikoshii}
Probab=37.09 E-value=8.7 Score=27.41 Aligned_cols=30 Identities=23% Similarity=0.552 Sum_probs=21.4
Q ss_pred ceEeeec-cCCCeEEEeeccccCCCCCCceEEECCCCCceEE
Q psy7115 51 QMFTYPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSLLLE 91 (132)
Q Consensus 51 ~~~~~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ik 91 (132)
..|.|.| -||..|... .. ...||.|.-.++
T Consensus 129 ~~~~y~C~~Cg~~~~~~----~~-------~~~Cp~CG~~~~ 159 (165)
T 2lcq_A 129 IKWRYVCIGCGRKFSTL----PP-------GGVCPDCGSKVK 159 (165)
T ss_dssp CCCCEEESSSCCEESSC----CG-------GGBCTTTCCBEE
T ss_pred ccEEEECCCCCCcccCC----CC-------CCcCCCCCCcce
Confidence 4699999 799988533 11 136999987654
No 47
>3iz6_X 40S ribosomal protein S27 (S27E); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=29.14 E-value=28 Score=23.21 Aligned_cols=20 Identities=10% Similarity=0.157 Sum_probs=13.2
Q ss_pred CceEEECCCCCceEEEEecCC
Q psy7115 77 DNILIACDTCSLLLEITARCG 97 (132)
Q Consensus 77 ~~~vv~C~sCSL~ikV~~~~~ 97 (132)
+.+-|.|++|.- +.++|.+.
T Consensus 33 ~Fm~VkCp~C~~-~~~VFShA 52 (86)
T 3iz6_X 33 FFMDVKCQGCFN-ITTVFSHS 52 (86)
T ss_dssp CEEEEECTTTCC-EEEEETTC
T ss_pred cEeEEECCCCCC-eeEEEecC
Confidence 356788888854 47777543
No 48
>3u5c_b RP61, YS20, 40S ribosomal protein S27-A; translation, ribosome, ribosomal, ribosomal R ribosomal protein, eukaryotic ribosome, RNA-protein C; 3.00A {Saccharomyces cerevisiae} PDB: 3izb_X 3u5g_b
Probab=27.00 E-value=22 Score=23.53 Aligned_cols=18 Identities=11% Similarity=0.239 Sum_probs=10.5
Q ss_pred ceEEECCCCCceEEEEecC
Q psy7115 78 NILIACDTCSLLLEITARC 96 (132)
Q Consensus 78 ~~vv~C~sCSL~ikV~~~~ 96 (132)
.+-|.|++|. .+.|+|.+
T Consensus 32 Fm~VkCp~C~-~~q~VFSh 49 (82)
T 3u5c_b 32 FLDVKCPGCL-NITTVFSH 49 (82)
T ss_dssp EEEEECTTSC-SCEEEESB
T ss_pred EEEEECCCCC-CeeEEEec
Confidence 4667777774 34566643
No 49
>1wg2_A Zinc finger (AN1-like) family protein; riken structural genomics/proteomics initiative, RSGI, structural genomics, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=24.50 E-value=29 Score=21.87 Aligned_cols=18 Identities=33% Similarity=0.994 Sum_probs=12.8
Q ss_pred eeeccCCCeEEEeecccc
Q psy7115 54 TYPCRCGAEFCIEEQDTE 71 (132)
Q Consensus 54 ~~~CRCGg~f~It~edL~ 71 (132)
.+.||||+.|-..---.+
T Consensus 29 ~f~CrCg~~FC~~HR~~e 46 (64)
T 1wg2_A 29 GFKCKCGSTFCGSHRYPE 46 (64)
T ss_dssp CEECTTSCEECSSSCSST
T ss_pred CeEeecCCEecccCCCcc
Confidence 588999999866544333
No 50
>1wfh_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=24.41 E-value=30 Score=21.82 Aligned_cols=15 Identities=40% Similarity=1.165 Sum_probs=11.4
Q ss_pred eeeccCCCeEEEeec
Q psy7115 54 TYPCRCGAEFCIEEQ 68 (132)
Q Consensus 54 ~~~CRCGg~f~It~e 68 (132)
.+.||||+.|-..--
T Consensus 29 ~f~CrCg~~FC~~HR 43 (64)
T 1wfh_A 29 GFMCRCGTTFCGSHR 43 (64)
T ss_dssp CEECSSSCEECTTTC
T ss_pred CEEeecCCEeccccC
Confidence 588999998865443
No 51
>1qyp_A RNA polymerase II; transcription, RPB9, Zn ribbon, hyperthermophilic, extremophIle; NMR {Thermococcus celer} SCOP: g.41.3.1
Probab=22.63 E-value=97 Score=18.08 Aligned_cols=34 Identities=18% Similarity=0.644 Sum_probs=18.0
Q ss_pred eeec-cCCCe----EEEeeccccCCCCCCceEEECCCCCceE
Q psy7115 54 TYPC-RCGAE----FCIEEQDTEGDGSDDNILIACDTCSLLL 90 (132)
Q Consensus 54 ~~~C-RCGg~----f~It~edL~~G~~~~~~vv~C~sCSL~i 90 (132)
..+| +||.. |.+....-.++ ......|..|.-..
T Consensus 15 ~~~Cp~Cg~~~~~~~q~Q~rsadep---~T~fy~C~~Cg~~w 53 (57)
T 1qyp_A 15 KITCPKCGNDTAYWWEMQTRAGDEP---STIFYKCTKCGHTW 53 (57)
T ss_dssp ECCCTTTCCSEEEEEEECCSSSSCS---SEEEEEESSSCCEE
T ss_pred EeECCCCCCCEEEEEEeecccCCCC---CcEEEEcCCCCCEe
Confidence 5678 88864 22221111223 24677788887543
No 52
>1wff_A Riken cDNA 2810002D23 protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.80.1.1
Probab=22.61 E-value=33 Score=22.76 Aligned_cols=15 Identities=40% Similarity=1.349 Sum_probs=11.7
Q ss_pred eeeccCCCeEEEeec
Q psy7115 54 TYPCRCGAEFCIEEQ 68 (132)
Q Consensus 54 ~~~CRCGg~f~It~e 68 (132)
.+.||||+.|-..--
T Consensus 40 ~f~CrCg~~FC~~HR 54 (85)
T 1wff_A 40 SFECRCGNNFCASHR 54 (85)
T ss_dssp CEECTTCCEECTTTC
T ss_pred CeEcCCCCEecccCC
Confidence 689999998865544
No 53
>1twf_I B12.6, DNA-directed RNA polymerase II 14.2 kDa polypepti; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.3.1 g.41.3.1 PDB: 1i3q_I 1i6h_I 1k83_I* 1nik_I 1nt9_I 1pqv_I 1r5u_I 1r9s_I* 1r9t_I* 1sfo_I* 1twa_I* 1twc_I* 1i50_I* 1twg_I* 1twh_I* 1wcm_I 1y1v_I 1y1w_I 1y1y_I 1y77_I* ...
Probab=21.68 E-value=66 Score=22.05 Aligned_cols=29 Identities=31% Similarity=0.704 Sum_probs=16.7
Q ss_pred eec-cCCCeEEEeeccccCCCCCCceEEECCCCCc
Q psy7115 55 YPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSL 88 (132)
Q Consensus 55 ~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL 88 (132)
..| .||..+.+.+.. .. ....+.|+.|.-
T Consensus 5 ~FCp~CgnlL~~~~~~-~~----~~~~~~C~~C~y 34 (122)
T 1twf_I 5 RFCRDCNNMLYPREDK-EN----NRLLFECRTCSY 34 (122)
T ss_dssp CBCSSSCCBCEEEEET-TT----TEEEEECSSSSC
T ss_pred CcccccCccCcccccC-cC----CCCEEECCcCCC
Confidence 457 777776555431 11 246777777763
No 54
>1wfp_A Zinc finger (AN1-like) family protein; ZF-AN1 domain, zinc binding, structural genomics, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} SCOP: g.80.1.1
Probab=20.75 E-value=38 Score=21.96 Aligned_cols=15 Identities=40% Similarity=1.209 Sum_probs=11.3
Q ss_pred eeeccCCCeEEEeec
Q psy7115 54 TYPCRCGAEFCIEEQ 68 (132)
Q Consensus 54 ~~~CRCGg~f~It~e 68 (132)
.+.||||+.|-..--
T Consensus 39 ~f~CrCg~~FCs~HR 53 (74)
T 1wfp_A 39 GFKCRCGSTFCGTHR 53 (74)
T ss_dssp CEECTTSCEECTTTC
T ss_pred ceEeccCCEeccccC
Confidence 688999998865433
No 55
>1vq8_Z 50S ribosomal protein L37AE; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: g.41.8.1 PDB: 1vq4_Z* 1vq6_Z* 1vq5_Z* 1vq7_Z* 1vq9_Z* 1vqk_Z* 1vql_Z* 1vqm_Z* 1vqn_Z* 1vqo_Z* 1vqp_Z* 1yhq_Z* 1yi2_Z* 1yij_Z* 1yit_Z* 1yj9_Z* 1yjn_Z* 1yjw_Z* 2qa4_Z* 1s72_Z* ...
Probab=20.35 E-value=1e+02 Score=19.97 Aligned_cols=28 Identities=18% Similarity=0.450 Sum_probs=18.2
Q ss_pred Eeeec-cCCCeEEEeeccccCCCCCCceEEECCCCCce
Q psy7115 53 FTYPC-RCGAEFCIEEQDTEGDGSDDNILIACDTCSLL 89 (132)
Q Consensus 53 ~~~~C-RCGg~f~It~edL~~G~~~~~~vv~C~sCSL~ 89 (132)
-.|+| .||........ ..+..|+.|...
T Consensus 26 ~~y~Cp~CG~~~v~r~a---------tGiW~C~~Cg~~ 54 (83)
T 1vq8_Z 26 EDHACPNCGEDRVDRQG---------TGIWQCSYCDYK 54 (83)
T ss_dssp SCEECSSSCCEEEEEEE---------TTEEEETTTCCE
T ss_pred ccCcCCCCCCcceeccC---------CCeEECCCCCCE
Confidence 46889 99975433322 236789999654
Done!