RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7121
         (79 letters)



>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
           taurus), mitochondrial izozyme-2 [TaxId: 9913]}
          Length = 190

 Score = 26.4 bits (57), Expect = 0.36
 Identities = 7/35 (20%), Positives = 14/35 (40%)

Query: 27  HVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVY 61
              +     ++ +      QTTP+ +YY   G+  
Sbjct: 132 IHSDDNKKALKIRLEAYHTQTTPLVEYYSKRGIHS 166


>d1teva_ c.37.1.1 (A:) UMP/CMP kinase {Human (Homo sapiens) [TaxId:
           9606]}
          Length = 194

 Score = 25.3 bits (54), Expect = 0.87
 Identities = 6/20 (30%), Positives = 11/20 (55%)

Query: 35  VIRKQHRHSMEQTTPIADYY 54
            + K+ +  ++ T PI D Y
Sbjct: 145 SLEKRIQTYLQSTKPIIDLY 164


>d1qf9a_ c.37.1.1 (A:) UMP/CMP kinase {Dictyostelium discoideum
           [TaxId: 44689]}
          Length = 194

 Score = 25.3 bits (54), Expect = 0.87
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 35  VIRKQHRHSMEQTTPIADYYIIAGVVY 61
            I+K+      QT  + D+Y     V 
Sbjct: 144 SIKKRFNTFNVQTKLVIDHYNKFDKVK 170


>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
           stearothermophilus [TaxId: 1422]}
          Length = 182

 Score = 25.3 bits (54), Expect = 0.90
 Identities = 6/39 (15%), Positives = 15/39 (38%)

Query: 23  YIVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVY 61
            +     +     +  +   +M+Q  P+ D+Y   G + 
Sbjct: 120 LMERLTADDNEATVANRLEVNMKQMKPLVDFYEQKGYLR 158


>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
           globisporus [TaxId: 1459]}
          Length = 182

 Score = 24.8 bits (53), Expect = 1.0
 Identities = 8/46 (17%), Positives = 17/46 (36%)

Query: 16  LNMTGLEYIVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVY 61
           + +   E I     +     +  +   +M QT P+  +Y    V+ 
Sbjct: 113 IQVEKEELIARLTADDNPDTVTNRLEVNMNQTAPLLAFYDSKEVLV 158


>d3adka_ c.37.1.1 (A:) Adenylate kinase {Pig (Sus scrofa) [TaxId:
           9823]}
          Length = 194

 Score = 24.9 bits (53), Expect = 1.3
 Identities = 7/26 (26%), Positives = 13/26 (50%)

Query: 36  IRKQHRHSMEQTTPIADYYIIAGVVY 61
           I+K+     + T P+  +Y   G+V 
Sbjct: 146 IKKRLETYYKATEPVIAFYEKRGIVR 171


>d1ukza_ c.37.1.1 (A:) Uridylate kinase {Baker's yeast
           (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 196

 Score = 24.2 bits (51), Expect = 1.9
 Identities = 6/27 (22%), Positives = 12/27 (44%)

Query: 35  VIRKQHRHSMEQTTPIADYYIIAGVVY 61
            I+K+     E + P+ +Y+     V 
Sbjct: 147 SIKKRFNTFKETSMPVIEYFETKSKVV 173


>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
           coli [TaxId: 562]}
          Length = 179

 Score = 24.1 bits (51), Expect = 2.1
 Identities = 6/21 (28%), Positives = 10/21 (47%)

Query: 34  YVIRKQHRHSMEQTTPIADYY 54
             +RK+     + T P+  YY
Sbjct: 127 ETVRKRLVEYHQMTAPLIGYY 147


>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo
          sapiens) [TaxId: 9606]}
          Length = 88

 Score = 23.5 bits (50), Expect = 2.2
 Identities = 3/30 (10%), Positives = 13/30 (43%)

Query: 36 IRKQHRHSMEQTTPIADYYIIAGVVYQAPD 65
          +   H H + + + + +   +    ++ P+
Sbjct: 1  MHHHHHHLVPRGSILKEVTSVVEQAWKLPE 30


>d2ak3a1 c.37.1.1 (A:0-124,A:162-225) Adenylate kinase {Cow (Bos
           taurus), mitochondrial izozyme-3 [TaxId: 9913]}
          Length = 189

 Score = 24.0 bits (51), Expect = 2.6
 Identities = 11/69 (15%), Positives = 27/69 (39%), Gaps = 9/69 (13%)

Query: 15  ILNMTGLEYIVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQ---------APD 65
           ++N+     ++          + K+ +    QT P+ +YY   GV+            P 
Sbjct: 110 VINLNVPFEVIKQRLTDRPETVVKRLKAYEAQTEPVLEYYRKKGVLETFSGTETNKIWPH 169

Query: 66  LASVISSRL 74
           + + + ++L
Sbjct: 170 VYAFLQTKL 178


>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
           yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
          Length = 180

 Score = 23.7 bits (50), Expect = 2.7
 Identities = 8/35 (22%), Positives = 14/35 (40%)

Query: 27  HVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVY 61
             +      ++K+      QT PI D+Y   G+  
Sbjct: 124 VARITNADALKKRLAAYHAQTEPIVDFYKKTGIWA 158


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.322    0.138    0.393 

Gapped
Lambda     K      H
   0.267   0.0600    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 277,632
Number of extensions: 10275
Number of successful extensions: 48
Number of sequences better than 10.0: 1
Number of HSP's gapped: 48
Number of HSP's successfully gapped: 13
Length of query: 79
Length of database: 2,407,596
Length adjustment: 45
Effective length of query: 34
Effective length of database: 1,789,746
Effective search space: 60851364
Effective search space used: 60851364
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.2 bits)