Query psy7128
Match_columns 2056
No_of_seqs 485 out of 554
Neff 4.2
Searched_HMMs 46136
Date Fri Aug 16 18:51:09 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7128.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7128hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG1825|consensus 100.0 3E-132 6E-137 1280.3 47.8 1108 532-2056 35-1235(2206)
2 PF14222 MOR2-PAG1_N: Cell mor 100.0 1E-100 3E-105 946.2 29.4 491 716-1415 1-549 (552)
3 PF14228 MOR2-PAG1_mid: Cell m 100.0 2.4E-92 5.3E-97 911.9 34.2 468 1429-2056 9-534 (1120)
4 KOG3169|consensus 100.0 2.2E-43 4.7E-48 377.8 12.6 185 146-361 4-189 (208)
5 PF04934 Med6: MED6 mediator s 100.0 1E-36 2.3E-41 320.9 -5.6 137 153-309 3-140 (140)
6 COG5097 MED6 RNA polymerase II 100.0 7.2E-31 1.6E-35 277.4 8.5 145 149-315 7-151 (210)
7 KOG1825|consensus 99.6 5.1E-17 1.1E-21 215.2 0.6 392 716-1123 276-860 (2206)
8 PF14222 MOR2-PAG1_N: Cell mor 99.1 2.2E-11 4.7E-16 153.7 0.8 96 933-1030 407-513 (552)
9 PF13513 HEAT_EZ: HEAT-like re 49.4 13 0.00028 33.7 2.3 30 1764-1793 26-55 (55)
10 PF02985 HEAT: HEAT repeat; I 44.4 12 0.00025 30.9 1.1 26 1768-1793 2-27 (31)
11 PTZ00470 glycoside hydrolase f 34.1 30 0.00065 45.6 3.0 16 864-879 177-192 (522)
12 KOG1824|consensus 32.3 8.6E+02 0.019 34.9 15.4 207 1765-2019 173-403 (1233)
13 cd00020 ARM Armadillo/beta-cat 26.9 1.1E+02 0.0024 30.5 5.1 92 1958-2053 21-119 (120)
14 PF03130 HEAT_PBS: PBS lyase H 25.8 67 0.0014 26.1 2.6 25 1782-1806 1-26 (27)
15 PF13646 HEAT_2: HEAT repeats; 24.7 76 0.0017 30.7 3.4 30 1766-1795 31-60 (88)
16 KOG0151|consensus 23.1 7.3E+02 0.016 34.4 12.2 45 1763-1807 431-477 (877)
17 PTZ00470 glycoside hydrolase f 21.1 87 0.0019 41.6 3.8 19 822-849 121-139 (522)
18 PF14228 MOR2-PAG1_mid: Cell m 20.9 49 0.0011 47.2 1.6 73 1074-1162 112-185 (1120)
No 1
>KOG1825|consensus
Probab=100.00 E-value=2.8e-132 Score=1280.29 Aligned_cols=1108 Identities=22% Similarity=0.248 Sum_probs=920.0
Q ss_pred CCCCchhhHHHHHHHHHHHHHHHHHHHHhcCC-CCccchhhccCCCchHHHHHHHHhcccccccchhhHHHHHHHHHhhc
Q psy7128 532 NNVRPGEYVMRSLFADFTAQAEKKLDQVLAEP-QEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCLPSILRALFAWYERQM 610 (2056)
Q Consensus 532 ~~~tPgEYALh~LFt~F~~~AErKI~~~l~~p-lE~pLskiL~~G~Dp~FDqLL~SLGsIAe~~pKpvIDsmM~WRKsKs 610 (2056)
.+..||||++|++|.+|...+|+|+..+.+.| .|+++.+++|+|+||+||++|.+|+++|+|||+|+|+++|+|||++.
T Consensus 35 ~~~~~~~~~~~~~fl~~~~~~Erkl~~v~~~~~~E~~~~~llqrg~Dp~fD~viqsL~~la~~~p~pvl~al~~Wrk~~~ 114 (2206)
T KOG1825|consen 35 LAEHPGEYSGKASFLNFETLAERKLPLVRRLPVTEQPQTELLQRGEDPAFDQVIQSLAMIARHKPVPVLEALLRWRKSEQ 114 (2206)
T ss_pred HHhcCchHHHHHHHHHHHHHHhhcccccccccccchhHHHHHhcCCChhHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 34689999999999999999999998888877 79999999999999999999999999999999999999999999982
Q ss_pred CcchhhhcCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCcchhcccccCCCCCccccCCCcccCCCCCCccccccCcc
Q psy7128 611 RPSVEAAANPHISSNNNNNNNNNNNNNNNNNNNNNNNNNNNPVVIFLDKAYKGPSHVAKSGRKCFGTESGPSKILMLRPF 690 (2056)
Q Consensus 611 e~s~e~ksn~~~s~nnNNNNNNNNNNnNNNNNNNnNNnNnns~~~~l~~~~~~~~~rr~~~tk~~~te~~~s~~~~~~~~ 690 (2056)
. + . +.+. +++ ..++
T Consensus 115 ~-s-----~-~~ss------------------------~~~----------------------------~ast------- 128 (2206)
T KOG1825|consen 115 T-S-----Q-NSSS------------------------GAN----------------------------SAST------- 128 (2206)
T ss_pred h-c-----c-cccC------------------------CCC----------------------------CCcc-------
Confidence 1 0 0 0000 000 0000
Q ss_pred cccccchhhhhhHHHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHhhcCCCC-CCchhHHHHHHHhhhcccccccCccCCC
Q psy7128 691 RRVQEHTVLHEQYFRLRTKEAETILQERRDLAVEFVFCLILIEVLKQLPFH-PGHDNLVTYIETVAFKHFKYREGIQNDP 769 (2056)
Q Consensus 691 ~~~~~~~~~~~q~f~L~~~~e~~~laERRsLasiYIfCrVLIEVl~Q~p~~-~l~ddLv~kLEnIaFkQfK~~D~~~~sp 769 (2056)
....++|||++++||||||||+||++|.|.+ +..+++.....+.||.+++|.++....+
T Consensus 129 --------------------~~r~l~erk~l~~iyi~c~vl~Ei~pqip~~~~~~~~l~~~vld~cv~~~~y~~~~l~vs 188 (2206)
T KOG1825|consen 129 --------------------FPRKLAERKSLISIYILCRVLVEICPQIPSNEKLWSELENDVLDECVFHQLYVSQVLYVS 188 (2206)
T ss_pred --------------------ccchhhhcchhhHHHHHHhhhccccccCCcchhhhhhHHHHHHHHHHHHHhhcccccccc
Confidence 1126899999999999999999999999998 7777777777778888888888877667
Q ss_pred CCchhHHHHHHHHhhhccccccccchhHHHHHHHHHhhhccCCCCcchhhHHHHhcccceeEeeccchHHHHHHHHHHHH
Q psy7128 770 NATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRVKMVPIEEFEASFQFMQE 849 (2056)
Q Consensus 770 n~aN~~iVadLyAELLGvLSq~RF~sVsdRFi~eL~el~~~~~s~~~~~~i~~LI~GMRyLrIK~yP~E~fEeSadFMqs 849 (2056)
++.|.+.+||+|||++|+||++.|++|+|||++|+++++.+ .++..++++.+||+|||||||++||+|+||+|++||++
T Consensus 189 ~~~~~~~~~~~~aelvGvlS~~~f~av~~~f~ae~~~l~~~-~s~~~~~s~vsLI~gMRyLrl~~y~~~~~e~S~~F~~~ 267 (2206)
T KOG1825|consen 189 LVDLRLLLWDSFAELVGVLSRIYFVAVSDRFIAETERIDGK-ISPVAESSTVSLINGMRYLKLGVYPLEDFEASASFMQS 267 (2206)
T ss_pred hhhhHHHHHHHHHHHHHHHhhhhhHHHHHHHHHHHHhcccc-CChHHHHHHHHHHHhhhhheeccccccchHHHHHHHHH
Confidence 89999999999999999999999999999999999999877 67767789999999999999999999999999999999
Q ss_pred HHHhhhhccchhHHHHHHHHHHHHhhhhhcccccccccccccccccccccccccccccccccccccccCCCccchhhccc
Q psy7128 850 CAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFIPIVSSSQGKRRRVRGSESITLGLIDPLRASSNDDIHSECKQ 929 (2056)
Q Consensus 850 LAkfF~~shg~~VK~Aycevl~eLLLPVAa~ataEvN~Ppw~k~ve~iy~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~ 929 (2056)
|++||.++|++ ||||||+++++||+||||.+|+|+|+|.|...||+||..+..
T Consensus 268 l~~l~~~v~~~-~k~~~a~~~~elL~pl~a~~~~e~n~p~~~~~~e~l~~tt~~-------------------------- 320 (2206)
T KOG1825|consen 268 LSSLFLKVKDK-VKHALAGLLVELLLPLAAAVTDEVNIPAPPSVMETLYTTTLE-------------------------- 320 (2206)
T ss_pred HHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHhhccCCCcChHHHHHHHHHhHHH--------------------------
Confidence 99999999999 999999999999999999999999999888888888876644
Q ss_pred cCCCCCCCCCCcccccccccCCCCccccccCCCCcccccccccccccccccCccccchhhhhhhhhhhhhhHHHHHHhhh
Q psy7128 930 GLGLEPPTSRSDVQCINHCTTEEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQ 1009 (2056)
Q Consensus 930 ~~~~~~~~~~~~~~~~~~~~~k~p~~~~~~e~kpridlfrtcvaavprl~~d~m~~~~l~~~lsr~~~h~d~elr~l~~~ 1009 (2056)
. --..|+++..+|+...++|.
T Consensus 321 -----------------l------------------------------------------~~k~k~~l~~~p~~~s~lc~ 341 (2206)
T KOG1825|consen 321 -----------------L------------------------------------------VSKKKYWLSQFPLKTSLLCV 341 (2206)
T ss_pred -----------------H------------------------------------------hhccccceeeccceeccccC
Confidence 0 01356778888999999999
Q ss_pred ccccccccCCCcchhhhhhhhcccccccchhhhhhhccccccccccccCccCCCccccCCCCCCCCCCchhhhHhhhhcC
Q psy7128 1010 SLQTLVIDFPDWRHDVLAVFYFGTHDMTIDLQWIADRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGFCLFQFLQKG 1089 (2056)
Q Consensus 1010 slq~~~~~~~~Wr~~v~~~~~~~~~~~~~dlqwl~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~w~~~l~~~~~~~ 1089 (2056)
|.|++| ..+| ...| ..|++++ |+
T Consensus 342 s~k~~f--~~~w-~~~L----------------------------------------------------~~~~~~~--kn 364 (2206)
T KOG1825|consen 342 SPKSFF--LSNW-YSFL----------------------------------------------------VACLSNV--KN 364 (2206)
T ss_pred CcHHHH--HHHH-HHHH----------------------------------------------------HHHHHhc--cC
Confidence 999999 6777 1111 2677766 44
Q ss_pred cccccCccccccccchhhcccccccccccccccccccccccccccchhhHHHHHHHHHhhheeeccCCCChhHHHhHHHH
Q psy7128 1090 RVLTYCPSAVAQAWPIVYSRLHTLFPTIVPFLTTHSFTLISANSFICFPLAESLYRLLWVYMIRIKCESNSATQSRLQSI 1169 (2056)
Q Consensus 1090 ~~~~~c~~~~~~~w~~~~~r~~~l~~~idp~~~~~~~~li~~~~~~r~~~l~~l~rLlW~Yl~R~~~es~s~t~~rL~~i 1169 (2056)
+ +++++++++++||++|||++| |.+++|.|++..+
T Consensus 365 -~-----------------------------------------~~~~r~al~~L~rl~wvy~~r---~~~~~~~r~~~~~ 399 (2206)
T KOG1825|consen 365 -D-----------------------------------------PWMRRVALRSLSRLVWVYFIR---EMNDATHRSMSLD 399 (2206)
T ss_pred -C-----------------------------------------HHHHHHHHHHhHHhheeeccc---cccchhhHHHHHH
Confidence 3 478999999999999999999 8899999999999
Q ss_pred HhhccCCCCcccccCCCchhhhhhhhhhhccchhhhHHHHHHHHhhccCCCccc-ccCchhhHHHHHHHHHHHhhhhccC
Q psy7128 1170 VNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQERLDFAMREIVFDLLSVGRPIKL-ILTPERMSIGLRAFLVVADSLQQKE 1248 (2056)
Q Consensus 1170 ~~~lfp~g~k~~~~~d~~l~~~v~ii~~i~~~~~df~~~~ii~~Ll~~~~~~k~-~l~pErm~igirAfl~i~~~l~~~~ 1248 (2056)
+-.+||+|.+.++++|.|.++|+++|++|++.++||+|++++|+.|.++.+++- .+++++|+||+|++++++++++|+.
T Consensus 400 ~~~~l~~g~~~~~~~s~p~nlf~~~l~~is~~~l~f~l~e~~l~~Lv~~~~l~~~~~~~~~enlg~~~~~~~~~~v~q~~ 479 (2206)
T KOG1825|consen 400 CLHRLLRGYLSVYKSSQPPNLFWLYLDLISQSQLLFVLREGMLTQLVQQDPLVRFSVNIAEENLGLAMNMMLLELVKQDL 479 (2206)
T ss_pred HHHHhcccccccccccCccHHHHHHHHHHhhHHHHHHHHHHhhHHHHhhCccccccccHHHHhhHHHHHHHHHHhHhhhc
Confidence 999999999999999999999999999999999999999999999999998887 6999999999999999999999999
Q ss_pred CCCCCCCCCCCCCCCCcccccccc-cchhHHHHHHHHHhhcccCCccccccccccccchhhhhccccchhhHHhhhhh-h
Q psy7128 1249 GEPPMPRTSGVLPSGNTLRVKKTY-LNKVSKTYLILLLFYRFDGGNCNNRDVNRGHSALYRDVCVLPSCETRVCRYLE-S 1326 (2056)
Q Consensus 1249 ~~Pp~P~~~~~~ps~~~~~v~~~~-l~~~~~~~~~~l~~~~~~g~~c~~~~~~~g~~~yy~~~~~~l~~~~~i~~~ld-~ 1326 (2056)
++|+||.+....++++..++++.+ .+...|+ +.|+.+|+.+||++++++ ++.|++.|| +
T Consensus 480 ~~~~~~~s~~~~~~~~~~~~~~~~~~s~~~T~----------------e~ak~~gi~~~lp~~~~a---~e~ilr~~~r~ 540 (2206)
T KOG1825|consen 480 PSEAKIKSLRALLALNMSPFSQLQGPSCDLTE----------------EIAKGHGIGQLLPKVKAA---IESILRSCHRT 540 (2206)
T ss_pred CCccccccccccccccceeccccccccCCchH----------------HHhhccCHHHHHHHHHHH---HHHHHHHHHHh
Confidence 999999999999999998887666 8888887 789999999999999998 999999999 9
Q ss_pred cCCCccccccccchhhHhHhh-------------------cCCCCCCCCCCee--ecCcccccChhHHHHHHHHh---hc
Q psy7128 1327 VGHPLRASSNDDIHSECKQVL-------------------GHAPLVLGPAPLV--LSPAPLVLDHAHLVLGHASL---VL 1382 (2056)
Q Consensus 1327 ~g~~l~~~~~~~~~~~~~~~~-------------------~~lP~~~~~~~li--L~~~t~hvd~~lr~~A~qsL---vv 1382 (2056)
+|++++.++.+. .|+++.++ ..+|+.|+.+++| ||+.++|+|+++|.+|+|+| ++
T Consensus 541 ~~~~l~~ss~~s-~k~~~~~i~~~~k~~~~lfk~~~~~ip~li~~~~~~~~ii~il~r~sihld~~lr~~sq~vL~~ll~ 619 (2206)
T KOG1825|consen 541 YSQALLSSSRTS-AKLDALGIVNKLKSQLSLFKSELKCIPYLIEEVGRSDKIIEILPRNSIHLDEGLRKMSQQVLNRLLR 619 (2206)
T ss_pred hhhhhccccccc-ccCchhhhccccccchhhHHHHHHhhhhhcccCcchhhHHHHHhhhheeecHHhhhccHHHHHHHHh
Confidence 999999888877 55554333 3388999999998 99999999999999999999 55
Q ss_pred cch----HHHHHhhhcc----cCcchhhchhHHHHHHhhcc----------c---C---C-----------------CCC
Q psy7128 1383 DNA----HLVFGHAHLV----LGHASLVLDNAHLVFGHAHS----------N---S---N-----------------LSN 1421 (2056)
Q Consensus 1383 ~~~----~V~~gfa~FI----~D~y~~l~D~~Lrl~lq~~~----------~---~---~-----------------~~~ 1421 (2056)
++| +|++||++|| +|.++++++.++++|+|..+ . + + ...
T Consensus 620 ~~~~~re~V~~s~~~fi~~~i~d~~~~l~~~sl~l~l~sL~~wk~~l~~~~ks~~~ses~~~~k~~~~~~~is~~~~~~~ 699 (2206)
T KOG1825|consen 620 KLPHRREYVLRSMANFILIEIPDEFALLIYLSLKLLLESLRFWKLCLTASRKSTDASESNKTAKKETAFTKLSFTQIADQ 699 (2206)
T ss_pred hcCchHHHHHhhhhHHHHhhcchhhhHHHHhhHHHHHHHHHHHHHHHhhhhccccchhhhhhhcchhhhcceeeeecccc
Confidence 666 8999999998 89999999999999977311 1 0 0 012
Q ss_pred CccchhhHhccceeEEeecCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccccccccccccCCcccccC
Q psy7128 1422 LTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGLGLEPPTSRSDVQCIDHCTTDVMQCKTHTSETQCSY 1501 (2056)
Q Consensus 1422 l~~ssvl~~vEg~gLvfLCS~s~~vRr~AV~vLR~Vr~l~~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~ 1501 (2056)
+...++++.+|++|+++||+.+..+|++||.+|++|+.++..+|...
T Consensus 700 ~~t~s~~~~i~~~av~~L~~v~s~~r~~~v~~l~~ir~l~i~i~~~~--------------------------------- 746 (2206)
T KOG1825|consen 700 LATESPASGIDKFAVILLSSVDSLTRATAVLLLRKVRALRIDIRDLM--------------------------------- 746 (2206)
T ss_pred ccccchhhcccceeEEEeeccccchhHHHHHHHHHHHHHHHhhhhhh---------------------------------
Confidence 45667889999999999999999999999999999999999998654
Q ss_pred CCCCCcccchhhhhhhhhcccCCCCCCCCCCCCCccCCcchhhhhhccChhhhhccccccchhhhhhhcccccccchhhh
Q psy7128 1502 PTRGENVEQSSRLCTQELRNWIRPSEQPPWPSCSEHADQNVIDVIDKACPDILDQCMSQLTCADKTAALSASCIDLQWIA 1581 (2056)
Q Consensus 1502 ~~~~e~~~~s~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~vIDVle~~~~~Il~~~~~~l~~aer~~~l~~~~~DlqW~~ 1581 (2056)
.++-+.||+++++.+.++....|+...+ . +||..
T Consensus 747 -----------------------------------~d~~p~~d~~~~a~~~~~~~~~e~~~ad-~----------~~~~i 780 (2206)
T KOG1825|consen 747 -----------------------------------IDEHPDHDMKFEAEPSYHIDVLEHHGAD-I----------LQSLI 780 (2206)
T ss_pred -----------------------------------hhcchhHHHHHhhhhhhhHHHHHHhccc-c----------eeecc
Confidence 1233566666666666666655553221 1 34444
Q ss_pred cccc-cccccccccCCCCCCcceeccCCCCCCCchhhhhHHhhhhhcccccChHHHHHHHHHHHHHHhhhcccccccccc
Q psy7128 1582 DRSA-SIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIGKKTSY 1660 (2056)
Q Consensus 1582 ~rs~-~~~~~g~~~~~~~~~~l~~L~~S~~~~D~W~~cL~~~l~~~~~~~~CP~AV~~ar~iV~~RL~~l~~~i~~~a~~ 1660 (2056)
+-+. +....-...+-.-...+-....+...+|+|++||+.+.++...++.||.+.+++|++...|...+.+..
T Consensus 781 ~~s~r~~~~~~~~~~i~sd~~~~~~~f~~~~k~kwg~~L~~~~~~~~l~~~c~~~~s~s~~ll~~~~~a~~~~~------ 854 (2206)
T KOG1825|consen 781 DDSARPSLLRLDSDTIPSDSTLWSIIFSRLDKNKWGLLLSELVKYAGLLKPCSVQESKSEILLRRAHSAPSEFG------ 854 (2206)
T ss_pred cCCccchhhcCCCCCCCCcceehhhhhhhhccchhhhhhHHHHHHhcCCCCcchhhhhhhHHHHHHhccchhcc------
Confidence 4331 000000000110111111112233347899999999999888899999999999999999999988888
Q ss_pred cchhhhhcccCCCCC-CCCCCcccccccCCCCCCC-----CCCCchhHHHHHHHHHHhhccccCCCCCC--CCCCCCCCC
Q psy7128 1661 CALTYYFLLSSLTDP-TPVSDNRASLLRSSAPPRK-----PVSERDSFLSLWRYLAIFSARVVPPVPYP--TPRCASPDL 1732 (2056)
Q Consensus 1661 ~~~~~~~~l~~~~dp-~p~~~~rasllrss~~~~~-----p~~~~d~~l~qWk~Yli~aC~~~p~~~~~--~~r~asP~~ 1732 (2056)
|| +|.++.++.++|-...+.. +..-.+..+-+|+.|++++|+.++.+... +.|..+|+.
T Consensus 855 -------------~~s~~q~d~~s~~~~~~~~~~~v~fk~~~~~~~~~v~~w~~yl~~~~~~~~~~~~s~~h~rs~~pt~ 921 (2206)
T KOG1825|consen 855 -------------GKSNPQNDLDSKLLRWLLYAMFVCFKPPDGLDEGSVASWRDYLHLIFGVLRFGSESGNHLRSNAPTI 921 (2206)
T ss_pred -------------CCCccccccchHHHhhhccccceecccccccchhhhhhhhhhHHHhhhccccccccccchhhcCccc
Confidence 45 4677787776664432222 23457999999999999999998876543 889888888
Q ss_pred CCCCCCCCCCcccCCCCcCCCCCCCCCCCCChHHHHHHHhccc-----ccCChhhHHHHHHHhcCCCHHHHHHHHHHHHH
Q psy7128 1733 SLSWSPENVGGERGGAGVENKPAPTASPPPSPTGLYKLLVPLL-----RCDTTDVRDAVVHALGNINSEALKDLMEELSV 1807 (2056)
Q Consensus 1733 ~~~s~p~s~~~~R~~~~~~~~~~~~~~~i~Sar~LFklvvPlL-----r~e~~~IRdAvV~ALGsIN~~ayr~LLEEL~~ 1807 (2056)
+..+ |++... ... .+.....++++-++++++.. .-...+|++..|++.|.+|.-+|+.+.++|..
T Consensus 922 ~~~s-~~~~fS--~~~-------~~~s~~tpi~s~~k~~i~~~~~~~~~~~~~~i~~~~v~~~~~~~~~vf~~~~~~l~~ 991 (2206)
T KOG1825|consen 922 SHTS-CEGMFS--EVA-------ISFSDETPIKSKIKKVIRRENVRVHVENIYRITEENVWPFMLARKPVFALLVLRLIE 991 (2206)
T ss_pred ccCC-ccceeh--hhh-------hhccccCccchHHHHHHhhhhHHHHHHhccccchhheeccccccccchhhhhhhhhh
Confidence 7654 554432 110 11223445566666666554 44588999999999999999999999999999
Q ss_pred --HHHHHHhhhcc-chhhhcchhhHHHHHHHHHHHhhccCccCCCCCCC---cchhHHHHHHHHHHHHHhcchhhhH--H
Q psy7128 1808 --YIREAVDRKTE-NMRRRRRRDALRLQLVRVFELIAEHGTFGACSPTM---PGLLSPLAEYVDGARLCLELEADKQ--I 1879 (2056)
Q Consensus 1808 --~v~EA~dRk~s-n~RRrrRrD~LRleI~hV~eltAe~gvf~~~~~~~---~~l~~~lveyIkd~R~fL~~E~d~D--~ 1879 (2056)
..+++..|+++ +-+++.|+|++|.++-++.+.++..|.|.+..... ..+...+++|..-.++-|+++.+++ .
T Consensus 992 r~~~r~sl~R~e~~~~~~~~r~dLl~~~i~~~~e~l~~~Se~l~~~ale~d~vql~~~~~~~~~~~~~lLes~~~r~ie~ 1071 (2206)
T KOG1825|consen 992 RSTRRNSLARSESFHIMAPLRYDLLSVLIFLDPEFLISKSEFLDDTALERDFVQLLALYVDLRSYFGQLLESDYRREIEH 1071 (2206)
T ss_pred cccchhhhhcchhhhhhhhhhHHHHHHHhcccHHHHHHHHHHHHHHHhccchHHHHHHHHHhHHHHHHHHHHHHHHHHHh
Confidence 78899999987 78999999999999999999999887787765433 4578899999999999999988888 7
Q ss_pred HHHHHHHHHHHHHHHHhcCCCccccccCCH-HHHHHHHHHHHhhhcCCCCCccccccccccCCCCCCCCCChhhhhhhHH
Q psy7128 1880 LREIKAHFCNFVCKMIHSFPLESRQTLLKR-DLRRNLFSLFTSWAGQYGRNLNITQSYSVSMPNPPASNPGPEALKTSEE 1958 (2056)
Q Consensus 1880 lq~LR~hFc~lve~Li~~~~~~~~~~~f~~-elRksLF~Lf~~WcG~~g~~~~~~~rre~~mr~~~~s~r~~aa~e~e~~ 1958 (2056)
+...|.||.+....+|.+.+.....+.+++ ++|.++|.++..||+..++..+...+. .+..-+..
T Consensus 1072 ~t~~~~~fSk~a~~~i~~~~~~~~~~~~~~te~r~~l~~l~~~wc~~~a~~~~~~~~~--------------~~~~~~v~ 1137 (2206)
T KOG1825|consen 1072 PTTEQLNFSKRASCFISLDEWLGEGIEAPITELRNALAILLIGWCSELARDDNALKMS--------------RRVISQVL 1137 (2206)
T ss_pred hhhhccchHhhhHHHhccchhhcCCeechhhHHHHHHhhhhccccccccccccHHHHH--------------HHHHHHHH
Confidence 888999999999999999988888888888 999999999999998854333222111 12223666
Q ss_pred HHHHHHHHHHHHHhccCCCcCCCcccCCCcchHHHHHHHhcCCchhHHHHHHHHHHHHHHhCCCCchhHHHHHHhhcCCC
Q psy7128 1959 ELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVLYPWLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTAS 2038 (2056)
Q Consensus 1959 ~Lq~aAL~AMAAvLC~GPifd~~~~~~edG~ll~WID~If~S~s~r~~~igr~AL~nLL~~N~d~~~LLe~~IdrCYt~~ 2038 (2056)
+.+...+.+|.++|||||++++.+.+.++|++|+|++++|.+++..++++|++||+|||+.|+|...||+|||+|||+.+
T Consensus 1138 e~l~~~~~~~~~vl~c~d~~~p~~~l~~~e~l~~w~~~l~~s~~~tiv~L~~~~l~~LL~lN~en~~Lf~~~i~qCys~~ 1217 (2206)
T KOG1825|consen 1138 EYLIEPAPRVPFVLSCADPRTPSVSLFDGEGLLGWTEALFHSGNHTIVALAKLALKNLLLLNLENLVLFPAVIDQCYSSS 1217 (2206)
T ss_pred HHHHhhhcccccccccCccccCceecccchHHHHHHHHHhCCCCchHHHHHHHHHHHHHHhCcchhHHHHHHHHHHhcCc
Confidence 77777888888899999999998889999999999999999999999999999999999999999999999999999999
Q ss_pred ccchhhHHHHHHHHhhcC
Q psy7128 2039 VQVADGCFLALATLFSAR 2056 (2056)
Q Consensus 2039 ~~vA~GcF~aLa~Vfs~r 2056 (2056)
..+|+|||.+|++||++|
T Consensus 1218 ~tiA~~yf~~L~~v~~~~ 1235 (2206)
T KOG1825|consen 1218 ATIASGYFSVLAEVYMRQ 1235 (2206)
T ss_pred hHHHHHHHHHHHHHHHhc
Confidence 999999999999999976
No 2
>PF14222 MOR2-PAG1_N: Cell morphogenesis N-terminal
Probab=100.00 E-value=1.4e-100 Score=946.25 Aligned_cols=491 Identities=33% Similarity=0.494 Sum_probs=423.9
Q ss_pred HHhhhhhhHHHHHHHHHHHhhcCCCCCCchhHHHHHHHhhhcccccccCccCCCC-CchhHHHHHHHHhhhccccccccc
Q psy7128 716 QERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDPN-ATNIHTVADLYAEVLGVLAQSRFQ 794 (2056)
Q Consensus 716 aERRsLasiYIfCrVLIEVl~Q~p~~~l~ddLv~kLEnIaFkQfK~~D~~~~spn-~aN~~iVadLyAELLGvLSq~RF~ 794 (2056)
||||+|||+||||||||||++|+|.++++++|+++||+++|+|||++|+.+..++ ..+...+||+|||+||+||++||.
T Consensus 1 aeRk~l~s~yI~CrvLieil~q~~~~~l~~~l~~~le~i~F~~lk~~d~~~~~~~~s~~~~~~~~l~AellG~lS~~rF~ 80 (552)
T PF14222_consen 1 AERKSLASIYILCRVLIEILKQSPLHSLTEELGDKLEEIVFDQLKTADPVSEQPSTSPLRLANWDLFAELLGVLSEIRFV 80 (552)
T ss_pred ChHHHHHHHHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHhccCccccccccchhHHHHHHHHHHHHHHHHhhhCh
Confidence 5899999999999999999999999999999999999999999999999652233 345557889999999999999999
Q ss_pred hhHHHHHHHHHhhhccCCCCcchhhHHHHhcccceeEeeccchHHHHHHHHHHHHHHHhhhhcc-chhHHHHHHHHHHHH
Q psy7128 795 SVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRVKMVPIEEFEASFQFMQECAQYFTDVK-DKDVKHALAGLFVEI 873 (2056)
Q Consensus 795 sVsdRFi~eL~el~~~~~s~~~~~~i~~LI~GMRyLrIK~yP~E~fEeSadFMqsLAkfF~~sh-g~~VK~Aycevl~eL 873 (2056)
+|+|||++||++++. .+++.++++++||+||||||||+||+|+||+|||||++||+||.++| +.+|||||||+|++|
T Consensus 81 sVsdRF~~eL~~~~~--~~~~~~~~~~~li~GMr~lrlk~~p~e~~e~s~~Fm~~l~~~f~~~h~~~~ik~A~~~~l~~l 158 (552)
T PF14222_consen 81 SVSDRFIAELEKLRK--DSNDAESKIELLIMGMRYLRLKMYPEEAFEESAEFMQSLAKFFLEAHKKSDIKHAYCEVLVEL 158 (552)
T ss_pred HHHHHHHHHHHHhcc--cCCchHHHHHHHHhhcceeeecCCCHHHHHHHHHHHHHHHHHHHhcchhhHHHHHHHHHHHHH
Confidence 999999999999986 22356779999999999999999999999999999999999999996 556999999999999
Q ss_pred hhhhhcccccccccccccccccccccccccccccccccccccccCCCccchhhccccCCCCCCCCCCcccccccccCCCC
Q psy7128 874 LVPVAATVKNEVKFIPIVSSSQGKRRRVRGSESITLGLIDPLRASSNDDIHSECKQGLGLEPPTSRSDVQCINHCTTEEP 953 (2056)
Q Consensus 874 LLPVAa~ataEvN~Ppw~k~ve~iy~~~~~~~~~~~g~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~p 953 (2056)
|+|||+++++|+|||.|.++|++||+++.+
T Consensus 159 LlPvA~~~~~evn~P~W~~~v~~i~~~~~~-------------------------------------------------- 188 (552)
T PF14222_consen 159 LLPVAATATAEVNHPKWKEAVETIYPRAAK-------------------------------------------------- 188 (552)
T ss_pred HHHHhhcccccccccHHHHHHHHHHHHHHH--------------------------------------------------
Confidence 999999999999999999998888877644
Q ss_pred ccccccCCCCcccccccccccccccccCccccchhhhhhhhhhhhhhHHHHHHhhhccccccccCCCcchhhhhhhhccc
Q psy7128 954 DEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQSLQTLVIDFPDWRHDVLAVFYFGT 1033 (2056)
Q Consensus 954 ~~~~~~e~kpridlfrtcvaavprl~~d~m~~~~l~~~lsr~~~h~d~elr~l~~~slq~~~~~~~~Wr~~v~~~~~~~~ 1033 (2056)
|+. ++|||...+|++.+++|+|.+++| ..+
T Consensus 189 ----------------------------------~~~-K~khw~~afPL~t~lLCvS~~e~F--~~~------------- 218 (552)
T PF14222_consen 189 ----------------------------------MMS-KPKHWNVAFPLVTTLLCVSPKEFF--LSN------------- 218 (552)
T ss_pred ----------------------------------HHh-CcchhhhHHHHHHHHHhcCcHHHH--HHH-------------
Confidence 122 378899999999999999999998 333
Q ss_pred ccccchhhhhhhccccccccccccCccCCCccccCCCCCCCCCCch-hhhHhhhhcCcccccCccccccccchhhccccc
Q psy7128 1034 HDMTIDLQWIADRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWG-FCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHT 1112 (2056)
Q Consensus 1034 ~~~~~dlqwl~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~w~-~~l~~~~~~~~~~~~c~~~~~~~w~~~~~r~~~ 1112 (2056)
|. .|+..++.|.|+
T Consensus 219 --------------------------------------------W~~~~i~~~~~klKd--------------------- 233 (552)
T PF14222_consen 219 --------------------------------------------WLPSLIESLISKLKD--------------------- 233 (552)
T ss_pred --------------------------------------------HHHHHHHHHHhhcCC---------------------
Confidence 45 466666655554
Q ss_pred ccccccccccccccccccccccchhhHHHHHHHHHhhhe-eeccCCCChhHHHhHHHHHhhccCCCCcccccCC-Cchhh
Q psy7128 1113 LFPTIVPFLTTHSFTLISANSFICFPLAESLYRLLWVYM-IRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRD-TPLNI 1190 (2056)
Q Consensus 1113 l~~~idp~~~~~~~~li~~~~~~r~~~l~~l~rLlW~Yl-~R~~~es~s~t~~rL~~i~~~lfp~g~k~~~~~d-~~l~~ 1190 (2056)
+.+|.++|+|++||+|||| ||| ||++++|++|||+|++++||+|||+++|+| +++|+
T Consensus 234 --------------------k~~r~~~l~~l~RLlWvYL~~r~-~Es~n~T~krL~~i~~~lfp~~kk~~i~~D~~~~~~ 292 (552)
T PF14222_consen 234 --------------------KETRPVALECLSRLLWVYLVYRC-PESLNNTTKRLDSIFKLLFPKGKKGWIPRDPEPLNP 292 (552)
T ss_pred --------------------hhhhHHHHHHHHHHHHHHHhccc-CCCchHHHHHHHHHHHHHccCCCCcccCCChhhhhh
Confidence 4789999999999999999 999 599999999999999999999999999999 89999
Q ss_pred hhhhhhhhccchhhhHHHHHHHHhhccCCCcc--cccCchhhHHHHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCcccc
Q psy7128 1191 FVKIIQFIAQERLDFAMREIVFDLLSVGRPIK--LILTPERMSIGLRAFLVVADSLQQKEGEPPMPRTSGVLPSGNTLRV 1268 (2056)
Q Consensus 1191 ~v~ii~~i~~~~~df~~~~ii~~Ll~~~~~~k--~~l~pErm~igirAfl~i~~~l~~~~~~Pp~P~~~~~~ps~~~~~v 1268 (2056)
||+||||||++|+||||++||||||+++...+ .+++||||+|||||||+|++++|+||++|++|.+ ..+++++.++
T Consensus 293 lv~ii~~I~~~~~df~~~~iI~~LL~~~~~~s~~~~l~pERm~IgIRA~l~Il~~~e~~e~p~~p~~~--~~~~~~~~~~ 370 (552)
T PF14222_consen 293 LVQIIRFIGYKHLDFAFRNIIFPLLNVSFNGSSLENLNPERMIIGIRAFLAILSDLEQKEKPPPPPPT--SDPSGNTLRV 370 (552)
T ss_pred HHHHHHhHhhhCcchHHHHHHHHHHccccccccccccChhHHHHHHHHHHHHHHhhccCCCCCCCCCc--CCCCCccccc
Confidence 99999999999999999999999999998776 4999999999999999999999999988877766 3456666666
Q ss_pred cccccchhHHHHHHHHHhhcccCCccccccccccccchhhhhccccchhhHHhhhhh-hcCCCccccccccch-------
Q psy7128 1269 KKTYLNKVSKTYLILLLFYRFDGGNCNNRDVNRGHSALYRDVCVLPSCETRVCRYLE-SVGHPLRASSNDDIH------- 1340 (2056)
Q Consensus 1269 ~~~~l~~~~~~~~~~l~~~~~~g~~c~~~~~~~g~~~yy~~~~~~l~~~~~i~~~ld-~~g~~l~~~~~~~~~------- 1340 (2056)
+..+.++.++. ..+++.|+.+||++||++ +..|++.|| +||+++.+.+.+...
T Consensus 371 ~~~~~~~~l~~----------------~~~~~~~i~~~~~~~~~~---l~~il~~cD~~~G~~~~~~~~~~~~~~~t~~~ 431 (552)
T PF14222_consen 371 KYTPSNEYLSN----------------EIAKNSGIREYYEEFCRA---LGKILRLCDNTFGSQLWLDEKQSSSKPKTPFS 431 (552)
T ss_pred ccCcccccccc----------------hhhccccHHHHHHHHHHH---HHHHHHHHHHHhchhhccCcccccCCCCCCcc
Confidence 55555555542 567889999999999999 666888999 999877755433321
Q ss_pred --------------hhHhHhh----cCCCCCCCCC----Cee--ecCcccccChhHHHHHHHHh---hccch---HHHHH
Q psy7128 1341 --------------SECKQVL----GHAPLVLGPA----PLV--LSPAPLVLDHAHLVLGHASL---VLDNA---HLVFG 1390 (2056)
Q Consensus 1341 --------------~~~~~~~----~~lP~~~~~~----~li--L~~~t~hvd~~lr~~A~qsL---vv~~~---~V~~g 1390 (2056)
+..-+++ ..||+||+.+ ++| |||+++|+|++|++.|.++| +.+.| +|+.|
T Consensus 432 ~f~f~~~~d~~~~~~~~~~Lf~t~i~aiPrcL~~~i~~~~lielL~R~tvHvd~~I~~~A~~aLk~la~~~p~~~~vi~~ 511 (552)
T PF14222_consen 432 SFSFGRNDDMVTDQKPQLDLFRTCIQAIPRCLPSSIPFKSLIELLCRGTVHVDPNIRESAAQALKRLARDKPNRQQVITG 511 (552)
T ss_pred cccccccccccccccchhHHHHHHHHHccccCCCCCcHHHHHHHHhcccccCCHHHHHHHHHHHHHHHHcCCCHHHHHHH
Confidence 1112333 4489998774 666 99999999999999999999 55553 89999
Q ss_pred hhhcc---cCcchhh----------chhHHHHHHhhcc
Q psy7128 1391 HAHLV---LGHASLV----------LDNAHLVFGHAHS 1415 (2056)
Q Consensus 1391 fa~FI---~D~y~~l----------~D~~Lrl~lq~~~ 1415 (2056)
||+|| +|+|+++ ++.+||+|+++.+
T Consensus 512 Fa~Fif~~~d~~~~~~~~~~l~~~~~~~~L~lyveLL~ 549 (552)
T PF14222_consen 512 FARFIFRFDDKYPSMYDGGYLGSGEIESLLKLYVELLE 549 (552)
T ss_pred HHHHHeeCcccCccchhhhccchHHHHHHHHHHHHHHH
Confidence 99999 9999999 7888999987543
No 3
>PF14228 MOR2-PAG1_mid: Cell morphogenesis central region
Probab=100.00 E-value=2.4e-92 Score=911.93 Aligned_cols=468 Identities=29% Similarity=0.507 Sum_probs=381.7
Q ss_pred HhccceeEEeecCCCChhHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccccccccccccccCCcccccCCCCCCcc
Q psy7128 1429 HQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGLGLEPPTSRSDVQCIDHCTTDVMQCKTHTSETQCSYPTRGENV 1508 (2056)
Q Consensus 1429 ~~vEg~gLvfLCS~s~~vRr~AV~vLR~Vr~l~~~Lg~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~e~~ 1508 (2056)
++|||||||||||++++||++||+|||+|++||++|++..... | .
T Consensus 9 ~evEa~GLfFLCSqs~~VR~~AI~vLRlI~~fd~al~~~t~~~--~---------------------------------~ 53 (1120)
T PF14228_consen 9 DEVEAHGLFFLCSQSRRVRRFAITVLRLIREFDTALGKKTSNE--R---------------------------------G 53 (1120)
T ss_pred hhcccceEEEecCCchhHHHHHHHHHHHHHHHHHHHHhhcccc--c---------------------------------c
Confidence 7899999999999999999999999999999999999753100 0 0
Q ss_pred cchhhhhhhhhcccCCCCCCCCCCCCCccCCcchhhhhhccChhhhhccccccchhhhhhhcccccccchhhhccccccc
Q psy7128 1509 EQSSRLCTQELRNWIRPSEQPPWPSCSEHADQNVIDVIDKACPDILDQCMSQLTCADKTAALSASCIDLQWIADRSASIW 1588 (2056)
Q Consensus 1509 ~~s~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~vIDVle~~~~~Il~~~~~~l~~aer~~~l~~~~~DlqW~~~rs~~~~ 1588 (2056)
+++ ...+++.++||||||+++++|++.+++... + |...|.. |
T Consensus 54 -~~~--------------------~~~~~~~~~iiDilee~~~~il~~~~~~~~--~-------------~~~l~r~--~ 95 (1120)
T PF14228_consen 54 -DSS--------------------LKEEDSPTRIIDILEECGSDILQSCYWDSG--R-------------RSELRRE--S 95 (1120)
T ss_pred -ccc--------------------ccccCCCCeeeehhcccchHHHHHhhhccc--c-------------hhhhhhh--c
Confidence 000 012456789999999999999999887732 1 2222222 3
Q ss_pred ccccccCCCCCCcceeccCCCCCCC--chhhhhHHhhhhhcccccChHHHHHHHHHHHHHHhhhcccccccccccchhhh
Q psy7128 1589 TAGIHEDSNRNGSVLNLSPSCSAPD--PWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIGKKTSYCALTYY 1666 (2056)
Q Consensus 1589 ~~g~~~~~~~~~~l~~L~~S~~~~D--~W~~cL~~~l~~~~~~~~CP~AV~~ar~iV~~RL~~l~~~i~~~a~~~~~~~~ 1666 (2056)
+. ++. .++||+++++|| +|++|||++++ .++++||+||++||.+||+||.+|+|...
T Consensus 96 ~~-------~~~-~~~l~~~~~S~DstlW~r~fp~lir--~~fe~CP~tval~R~~v~~RL~~i~~~~l----------- 154 (1120)
T PF14228_consen 96 KS-------SPT-DIELCSSDESYDSTLWFRCFPNLIR--IAFERCPFTVALCRSEVCQRLQQITPIEL----------- 154 (1120)
T ss_pred cC-------CCC-ceeEeeeecccchHHHHHHHHHHHH--HHHHhCcHHHHHHHHHHHHHhccCCchhc-----------
Confidence 32 223 478889889999 99999999999 89999999999999999999999998661
Q ss_pred hcccCCCCCCCCCCcccccccCCCCCCCCCCCchhHHHHHHHHHHhhccccCCCCCCCCCCCCCCCCCCCCCCCCCcccC
Q psy7128 1667 FLLSSLTDPTPVSDNRASLLRSSAPPRKPVSERDSFLSLWRYLAIFSARVVPPVPYPTPRCASPDLSLSWSPENVGGERG 1746 (2056)
Q Consensus 1667 ~~l~~~~dp~p~~~~rasllrss~~~~~p~~~~d~~l~qWk~Yli~aC~~~p~~~~~~~r~asP~~~~~s~p~s~~~~R~ 1746 (2056)
++|+. .++++|++++|||+||||||+|+++. +
T Consensus 155 -------------~~k~~----------~s~~~e~~ieQWKlYLIfACttp~~s------------------------~- 186 (1120)
T PF14228_consen 155 -------------GSKSS----------QSTDPEVLIEQWKLYLIFACTTPTDS------------------------R- 186 (1120)
T ss_pred -------------cCccC----------CCCCccHHHHHHHHHHHHHhcCCCcC------------------------c-
Confidence 12211 12357999999999999999985532 1
Q ss_pred CCCcCCCCCCCCCCCCChHHHHHHHhcccccCChhhHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHH---hhhccchhhh
Q psy7128 1747 GAGVENKPAPTASPPPSPTGLYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIREAV---DRKTENMRRR 1823 (2056)
Q Consensus 1747 ~~~~~~~~~~~~~~i~Sar~LFklvvPlLr~e~~~IRdAvV~ALGsIN~~ayr~LLEEL~~~v~EA~---dRk~sn~RRr 1823 (2056)
+..++.|||+|||+|+|+|+++++++|||||+|||++|+++|++|||||+++++|+. +.++++++||
T Consensus 187 ----------s~~~i~SaR~LFk~ivPlLks~~~~~r~AaVlaLG~~n~~v~~~LleeL~~~i~~~~~e~e~r~~~k~rr 256 (1120)
T PF14228_consen 187 ----------SQQKITSARELFKLIVPLLKSESSSFRDAAVLALGSINLNVYRTLLEELQSYIEECNSEAESRPKWKRRR 256 (1120)
T ss_pred ----------cccccCCHHHHHHHHhhhhccCcHHHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHhcccccccch
Confidence 123578999999999999999999999999999999999999999999999999875 3567778888
Q ss_pred cchhhHHHHHHHHHHHhhccCccCCCCCC-CcchhHHHHHHHHHHHHHhc-chhhhH-HHHHHHHHHHHHHHHHHhcCCC
Q psy7128 1824 RRRDALRLQLVRVFELIAEHGTFGACSPT-MPGLLSPLAEYVDGARLCLE-LEADKQ-ILREIKAHFCNFVCKMIHSFPL 1900 (2056)
Q Consensus 1824 rRrD~LRleI~hV~eltAe~gvf~~~~~~-~~~l~~~lveyIkd~R~fL~-~E~d~D-~lq~LR~hFc~lve~Li~~~~~ 1900 (2056)
+|+|.||+||+|||+++|++ +...... +++++.++++|||++++||+ .++|.+ +||+||+|||+|+++++.++.
T Consensus 257 ~Rrd~LR~ev~hVl~llAe~--l~p~~l~~d~~L~~~lv~fIk~~~~fL~~~~~q~~~elQ~LR~~fc~ll~~l~~~~~- 333 (1120)
T PF14228_consen 257 RRRDRLRTEVTHVLRLLAEF--LKPGVLNDDWILRNNLVEFIKETKQFLEDEEVQNDWELQRLRYHFCGLLRNLAVGIV- 333 (1120)
T ss_pred hhhhhHHHHHHHHHHHHHhh--cChhhccchHHHHHHHHHHHHHHHHHHhccccccCHHHHHHHHHHHHHHHHHHHHhh-
Confidence 99999999999999999996 2221112 27788899999999999999 688888 999999999999999999995
Q ss_pred ccccccCCHHHHHHHHHHHHhhhcCCCCCccccc----cccccCCC------CCCCC-CChh--hhhhhHHHHHHHHHHH
Q psy7128 1901 ESRQTLLKRDLRRNLFSLFTSWAGQYGRNLNITQ----SYSVSMPN------PPASN-PGPE--ALKTSEEELQLTSLSA 1967 (2056)
Q Consensus 1901 ~~~~~~f~~elRksLF~Lf~~WcG~~g~~~~~~~----rre~~mr~------~~~s~-r~~a--a~e~e~~~Lq~aAL~A 1967 (2056)
...++||||++|++||+||++||||++..+++.+ +|+.+..+ .++.. +.++ ++|+++++||+||++|
T Consensus 334 ~~~se~fpfe~RkslF~l~~eWCGy~~~~~~~~~~s~~rre~~r~~~~~~~r~kd~~~~~~~~~~Ie~~~~~L~~aAl~A 413 (1120)
T PF14228_consen 334 KAKSEWFPFEARKSLFNLFEEWCGYSPSQWGQDGRSDYRREVERYKSSQLQREKDSRERATAEMEIEEQKRNLRTAALSA 413 (1120)
T ss_pred hchhhcCCHHHHHHHHHHHHHHhhhhcccccccchhhHHHHHHHHHHHHHhhhccchhhhHHHHHHHHHHHHHHHHHHHH
Confidence 4458999999999999999999999665555432 12211111 11111 1123 3555667999999999
Q ss_pred HHHHhccCCCcCCCcccCCCcchHHHHHHHhcCCchhH-------------------------------------HHHHH
Q psy7128 1968 MSAVLTCGPVFDPSTLLAEDGVLYPWLDMLLASSEEKT-------------------------------------YQIGC 2010 (2056)
Q Consensus 1968 MAAvLC~GPifd~~~~~~edG~ll~WID~If~S~s~r~-------------------------------------~~igr 2010 (2056)
||| ||+||||+++ ...++|+||+|||+||+++++|+ +.|||
T Consensus 414 MAa-Lc~GPif~~~-~~~~~grmlsWId~if~s~s~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lgr 491 (1120)
T PF14228_consen 414 MAA-LCGGPIFDDN-ASKPSGRMLSWIDSIFNSPSDRMPIGYSPLDPRTMSYSKHAGEGPRGATGRDKQKSSHARHSLGR 491 (1120)
T ss_pred HHH-HhcCCccccc-hhcccchHHHHHHHHHcCCCCCCcCCCCCCCccCcccccccCcccccccchhhhccchHHHHHHH
Confidence 999 9999999885 78899999999999999988764 47899
Q ss_pred HHHHHHHHhCCCCchhHHHHHHhhcCCCccchhhHHHHHHHHhhcC
Q psy7128 2011 QTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALATLFSAR 2056 (2056)
Q Consensus 2011 ~AL~nLL~~N~d~~~LLe~~IdrCYt~~~~vA~GcF~aLa~Vfs~r 2056 (2056)
+||+|||++|+| |++|||||||+++++||+|||.+|++||++|
T Consensus 492 ~AL~nLL~~N~d---Ll~~~IdrCYss~~~va~gYF~vlaev~~~~ 534 (1120)
T PF14228_consen 492 RALKNLLEHNPD---LLDWVIDRCYSSSPRVAEGYFTVLAEVFSER 534 (1120)
T ss_pred HHHHHHHHhhHH---HHHHHHHHhcCCChhHHHHHHHHHHHHHHcC
Confidence 999999999998 9999999999999999999999999999865
No 4
>KOG3169|consensus
Probab=100.00 E-value=2.2e-43 Score=377.80 Aligned_cols=185 Identities=35% Similarity=0.417 Sum_probs=149.4
Q ss_pred CCCCCceEeeccccccCCCccccccccCCCCCCCccccccccCccccccchhhHHHhHHhhcccccccccccccccccch
Q psy7128 146 DTPDSSVTVLPWAGGQRGGRAATCGTAADSGNNVRPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISKYVFHTRTMSF 225 (2056)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aleYFa~SPFYDrtSNNe~~~NqvL~~qQ~q~~~~~~~~~~~e~~ 225 (2056)
|.+++.-|+.|=++|-. ++ +.-+.||||+.|||||++|| ||+|+| |.||. + -+..
T Consensus 4 ~~l~~isw~dp~wi~~~-~L-----------~~~nVLdYFs~sPFYd~scN-----Ne~lkM-Q~qf~------~-~~~~ 58 (208)
T KOG3169|consen 4 DDLLSISWRDPEWIQSK-GL-----------RTENVLDYFSSSPFYDKSCN-----NEVLKM-QTQFR------G-RDLE 58 (208)
T ss_pred CCccceeeeCccccccc-CC-----------CcchHHHHhhcCcccccccc-----HHHHHH-HHHHh------c-cchH
Confidence 45677778888666655 34 45567899999999999999 666666 44443 1 1334
Q ss_pred hhccccceeEEEEEEecCCceEEEEEeeecCCCccceeeeEEEecCeEecCCChhHHHHHHHHHHHHHHHHHHHHHhccC
Q psy7128 226 AIFHTMLYLCLWVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAFEEVNSLS 305 (2056)
Q Consensus 226 ~~L~~M~GiEy~l~h~qEP~LfVIrKQ~R~sp~~v~pLa~YYII~GnIYQAP~l~sVlsSRLlsa~~~L~~af~~~~s~~ 305 (2056)
++|.+|.||||+|.|++||.|||||||+|+++++++|||+||||||+||||||+|+|++|||++++++|++||+++.++.
T Consensus 59 e~L~~m~GieYvl~~~~~P~LfVIrKQ~R~n~tev~PLa~YYII~g~VYqAPd~ysiv~sRml~a~~~lqsa~~e~~~~~ 138 (208)
T KOG3169|consen 59 EHLFSMVGIEYVLLHSREPILFVIRKQRRHNPTEVIPLADYYIINGNVYQAPDLYSIVQSRMLNAVYQLQSAFDEAMSYR 138 (208)
T ss_pred HHHhhCcCeEEEEEecCCCeEEEEehhhcCCCccceeeeeEEEECceeeeCccHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CccCCCCccccCCCCCCCCccc-hhhhhccCCCchHHHHHHHHHHHHHHhhCCCCCC
Q psy7128 306 KYNPNKGYSWDSKMLPQGKDTV-KKEIIKEEPSSIFQRQRVDMLLSELTRHFPVPPV 361 (2056)
Q Consensus 306 ~f~Ps~Gy~w~~k~~~~~~~~~-kk~~~~e~~~~~fQ~~RvD~LL~~L~~kfP~~~~ 361 (2056)
+|+|++||+|.++..+..++++ .+....++....+| |++.+..+||++.+
T Consensus 139 rynP~kGy~~~~~s~~~~~~~~~~~~~~~~~~~~~~s------l~n~~~~~~p~~~~ 189 (208)
T KOG3169|consen 139 RYNPSKGYTWRFLSKSLEDSKDLDNKNEIFNKFKKSS------LLNALYSFSPEDFS 189 (208)
T ss_pred hcCCCCCCcccccCCchhhhhhccccccccccchhHH------HHhhccccCCCccc
Confidence 9999999999999874433221 11112223344444 99999999997543
No 5
>PF04934 Med6: MED6 mediator sub complex component; InterPro: IPR007018 The Mediator complex is a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene-specific regulatory proteins to the basal RNA polymerase II transcription machinery. The Mediator complex, having a compact conformation in its free form, is recruited to promoters by direct interactions with regulatory proteins and serves for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. On recruitment the Mediator complex unfolds to an extended conformation and partially surrounds RNA polymerase II, specifically interacting with the unphosphorylated form of the C-terminal domain (CTD) of RNA polymerase II. The Mediator complex dissociates from the RNA polymerase II holoenzyme and stays at the promoter when transcriptional elongation begins. The Mediator complex is composed of at least 31 subunits: MED1, MED4, MED6, MED7, MED8, MED9, MED10, MED11, MED12, MED13, MED13L, MED14, MED15, MED16, MED17, MED18, MED19, MED20, MED21, MED22, MED23, MED24, MED25, MED26, MED27, MED29, MED30, MED31, CCNC, CDK8 and CDC2L6/CDK11. The subunits form at least three structurally distinct submodules. The head and the middle modules interact directly with RNA polymerase II, whereas the elongated tail module interacts with gene-specific regulatory proteins. Mediator containing the CDK8 module is less active than Mediator lacking this module in supporting transcriptional activation. The head module contains: MED6, MED8, MED11, SRB4/MED17, SRB5/MED18, ROX3/MED19, SRB2/MED20 and SRB6/MED22. The middle module contains: MED1, MED4, NUT1/MED5, MED7, CSE2/MED9, NUT2/MED10, SRB7/MED21 and SOH1/MED31. CSE2/MED9 interacts directly with MED4. The tail module contains: MED2, PGD1/MED3, RGR1/MED14, GAL11/MED15 and SIN4/MED16. The CDK8 module contains: MED12, MED13, CCNC and CDK8. Individual preparations of the Mediator complex lacking one or more distinct subunits have been variously termed ARC, CRSP, DRIP, PC2, SMCC and TRAP. Regulation of mRNA synthesis requires intermediary proteins that transduce regulatory signals from upstream transcriptional activator proteins to basal transcription machinery at the core promoter. Three types of intermediary factors that enable the basal transcription machinery to respond to transcriptional activator proteins bound to regulatory DNA sequences have been identified: (i) TAFIIs, which associate with TATA-binding protein (TBP) to form TFIID; (ii) mediator, which associates with RNA polymerase II to form a holo-polymerase; and (iii) coactivators such as human upstream stimulatory activity (USA), mammalian CBP/P300, yeast ADA complex, and HMG proteins. The interaction of these multiprotein complexes with activators and general transcription factors is essential for transcriptional regulation. This family of proteins represent the transcriptional mediator protein subunit 6 that is required for activation of many RNA polymerase II promoters and which are conserved from yeast to humans []..; GO: 0001104 RNA polymerase II transcription cofactor activity, 0006357 regulation of transcription from RNA polymerase II promoter, 0016592 mediator complex; PDB: 3RJ1_N.
Probab=100.00 E-value=1e-36 Score=320.90 Aligned_cols=137 Identities=40% Similarity=0.505 Sum_probs=50.0
Q ss_pred EeeccccccCCCccccccccCCCCCCCccccccccCccccccchhhHHHhHHhhcccccccc-cccccccccchhhcccc
Q psy7128 153 TVLPWAGGQRGGRAATCGTAADSGNNVRPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIIS-KYVFHTRTMSFAIFHTM 231 (2056)
Q Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~aleYFa~SPFYDrtSNNe~~~NqvL~~qQ~q~~~-~~~~~~~~e~~~~L~~M 231 (2056)
|+-|.+++++ ++ |.-+||+||++|||||++|| ||+|+||.. +.. .+..+..+++ +|++|
T Consensus 3 w~dp~~l~~~-~l-----------~~~nvL~YF~~SPFyd~~sn-----Ne~lrmQ~~-~~~~~~~~~~~~~~--~L~~m 62 (140)
T PF04934_consen 3 WRDPEWLQQN-GL-----------NSNNVLDYFSESPFYDRTSN-----NEVLRMQRQ-FNQQNLPTREAFEQ--QLRNM 62 (140)
T ss_dssp -----SHHHH-HH--------------STTSSTTTHHHH----S-----SSSSSTTTS-HHHTT-SSSHHHHH--TTTS-
T ss_pred ccCHHHHHhc-CC-----------ChhHHHHHHccCcccCCCCC-----Cceeeeccc-cCccccchhHHHHH--HHhhc
Confidence 7888888888 66 34567799999999999999 555555332 221 2222333333 59999
Q ss_pred ceeEEEEEEecCCceEEEEEeeecCCCccceeeeEEEecCeEecCCChhHHHHHHHHHHHHHHHHHHHHHhccCCccC
Q psy7128 232 LYLCLWVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAFEEVNSLSKYNP 309 (2056)
Q Consensus 232 ~GiEy~l~h~qEP~LfVIrKQ~R~sp~~v~pLa~YYII~GnIYQAP~l~sVlsSRLlsa~~~L~~af~~~~s~~~f~P 309 (2056)
+|+||+|+|++||+|||||||+|+++++++|+|+||||||+||||||+++|+++||++++++|++||+.++++++|+|
T Consensus 63 ~GiEY~l~~~~eP~l~vI~Kq~r~~~~~~~~la~YYIi~g~IYqAPsl~~vl~sRl~~~~~~l~~a~~~~~~~~~~~P 140 (140)
T PF04934_consen 63 KGIEYVLAHVQEPGLFVIRKQRRQSPDEVTPLAYYYIINGNIYQAPSLYSVLSSRLLSAVSSLSKAFDEANSMSRFSP 140 (140)
T ss_dssp -------------------------------------------------SSSSSTTTHHHHHHHHHHHTT--------
T ss_pred CCeEEEEeccCCCCEEEEEEeeccCCCcceEeEEEEEECCEEEeCCCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999999998
No 6
>COG5097 MED6 RNA polymerase II transcriptional regulation mediator [Transcription]
Probab=99.97 E-value=7.2e-31 Score=277.36 Aligned_cols=145 Identities=26% Similarity=0.274 Sum_probs=125.3
Q ss_pred CCceEeeccccccCCCccccccccCCCCCCCccccccccCccccccchhhHHHhHHhhcccccccccccccccccchhhc
Q psy7128 149 DSSVTVLPWAGGQRGGRAATCGTAADSGNNVRPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISKYVFHTRTMSFAIF 228 (2056)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aleYFa~SPFYDrtSNNe~~~NqvL~~qQ~q~~~~~~~~~~~e~~~~L 228 (2056)
+|.-|++|=++|-.|-| +.+.||||++|||||++|| ||+|+| |.||..- .+- +-.+.|
T Consensus 7 ~siqw~~pew~qs~gLr------------teNVLeYFs~SPFydk~sN-----NeilKM-Q~QF~~L-dL~---ql~~~l 64 (210)
T COG5097 7 TSIQWVDPEWLQSKGLR------------TENVLEYFSGSPFYDKSSN-----NEILKM-QTQFRGL-DLG---QLSKLL 64 (210)
T ss_pred cceeecCHHHHhccCCc------------chhHHHHhcCCCccccccc-----hHHHHH-HHHhhcc-ChH---HHHHHH
Confidence 47789999889888844 3456799999999999999 555555 4554311 000 222347
Q ss_pred cccceeEEEEEEecCCceEEEEEeeecCCCccceeeeEEEecCeEecCCChhHHHHHHHHHHHHHHHHHHHHHhccCCcc
Q psy7128 229 HTMLYLCLWVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAFEEVNSLSKYN 308 (2056)
Q Consensus 229 ~~M~GiEy~l~h~qEP~LfVIrKQ~R~sp~~v~pLa~YYII~GnIYQAP~l~sVlsSRLlsa~~~L~~af~~~~s~~~f~ 308 (2056)
+...|++|++.|.+||.|||||||+|+..++++|+.+|||+|.||||||+.|+++++||++++++|+++++.+.+..+|+
T Consensus 65 ~~l~g~~~V~ss~rep~lwVIrKq~r~n~~e~~pl~~Y~i~g~NIY~aPt~y~i~~~Rm~~s~y~lns~l~~~~~~~~fn 144 (210)
T COG5097 65 SMLGGFYEVESSNREPTLWVIRKQYRHNDTEETPLMYYIIHGHNIYAAPTNYSIYRCRMGDSMYQLNSFLDRMMEKRRFN 144 (210)
T ss_pred HhccCEEEEEecCCCCcEEEEehhhhcCCcccccceEEEEecCceeeCcchhhhhhhhhhhhHHHHHHHHHHHHHhhccC
Confidence 78899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCccc
Q psy7128 309 PNKGYSW 315 (2056)
Q Consensus 309 Ps~Gy~w 315 (2056)
|..||.|
T Consensus 145 P~~g~~y 151 (210)
T COG5097 145 PFSGPKY 151 (210)
T ss_pred CCCCCCC
Confidence 9999999
No 7
>KOG1825|consensus
Probab=99.62 E-value=5.1e-17 Score=215.24 Aligned_cols=392 Identities=16% Similarity=0.154 Sum_probs=247.1
Q ss_pred HHhhhhhhHHHHHHHHHHHhhcCCCCCCch---hHHHHHHHhhhcccccccCcc------------CCCC---CchhHHH
Q psy7128 716 QERRDLAVEFVFCLILIEVLKQLPFHPGHD---NLVTYIETVAFKHFKYREGIQ------------NDPN---ATNIHTV 777 (2056)
Q Consensus 716 aERRsLasiYIfCrVLIEVl~Q~p~~~l~d---dLv~kLEnIaFkQfK~~D~~~------------~spn---~aN~~iV 777 (2056)
++|=..+--+.+|-.|+-+..+...+.-.+ +.++.|-+..++ +..++.+. .+|. ..||..
T Consensus 276 ~~~~k~~~a~~~~elL~pl~a~~~~e~n~p~~~~~~e~l~~tt~~-l~~k~k~~l~~~p~~~s~lc~s~k~~f~~~w~~- 353 (2206)
T KOG1825|consen 276 KDKVKHALAGLLVELLLPLAAAVTDEVNIPAPPSVMETLYTTTLE-LVSKKKYWLSQFPLKTSLLCVSPKSFFLSNWYS- 353 (2206)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhhccCCCcChHHHHHHHHHhHHH-HhhccccceeeccceeccccCCcHHHHHHHHHH-
Confidence 334357778899999999988887654443 444444444443 11122211 1222 245533
Q ss_pred HHHHHhhhccccccccchhHHHHHHHHHhh----hccCCCCcc---hhhHH--HHhcccceeEeeccchHHHHHHHHHHH
Q psy7128 778 ADLYAEVLGVLAQSRFQSVRKRFMSELKEL----RFKEPNTHT---TQSII--SLLMGMKFFRVKMVPIEEFEASFQFMQ 848 (2056)
Q Consensus 778 adLyAELLGvLSq~RF~sVsdRFi~eL~el----~~~~~s~~~---~~~i~--~LI~GMRyLrIK~yP~E~fEeSadFMq 848 (2056)
-|-+.+.-+-+ -....+-++..|-.+ -..+....+ ...+. .|..|-++.....-|.-.|-...+|+.
T Consensus 354 -~L~~~~~~~kn---~~~~~r~al~~L~rl~wvy~~r~~~~~~~r~~~~~~~~~l~~g~~~~~~~s~p~nlf~~~l~~is 429 (2206)
T KOG1825|consen 354 -FLVACLSNVKN---DPWMRRVALRSLSRLVWVYFIREMNDATHRSMSLDCLHRLLRGYLSVYKSSQPPNLFWLYLDLIS 429 (2206)
T ss_pred -HHHHHHHhccC---CHHHHHHHHHHhHHhheeeccccccchhhHHHHHHHHHHhcccccccccccCccHHHHHHHHHHh
Confidence 22222222211 233344444444322 111111111 11122 255688888888889999999999887
Q ss_pred -HHHHhhh-----------------------hccchhHHHHHHHHHHHHhhhhhcccc----cccccccccccccccccc
Q psy7128 849 -ECAQYFT-----------------------DVKDKDVKHALAGLFVEILVPVAATVK----NEVKFIPIVSSSQGKRRR 900 (2056)
Q Consensus 849 -sLAkfF~-----------------------~shg~~VK~Aycevl~eLLLPVAa~at----aEvN~Ppw~k~ve~iy~~ 900 (2056)
+.-.|+. +.=|.++++-.++.+-+++.+-|...+ .+.|.-+- +. ..|..
T Consensus 430 ~~~l~f~l~e~~l~~Lv~~~~l~~~~~~~~~enlg~~~~~~~~~~v~q~~~~~~~~~s~~~~~~~~~~~~-~~--~~~~s 506 (2206)
T KOG1825|consen 430 QSQLLFVLREGMLTQLVQQDPLVRFSVNIAEENLGLAMNMMLLELVKQDLPSEAKIKSLRALLALNMSPF-SQ--LQGPS 506 (2206)
T ss_pred hHHHHHHHHHHhhHHHHhhCccccccccHHHHhhHHHHHHHHHHhHhhhcCCccccccccccccccceec-cc--ccccc
Confidence 2222221 112345555555555555554443221 11111110 00 00000
Q ss_pred ccccccc--cccccccccc--CCCccchhhccccCCCCCCCCCCcccccccccCCCCccccccCCCCccccccccccccc
Q psy7128 901 VRGSESI--TLGLIDPLRA--SSNDDIHSECKQGLGLEPPTSRSDVQCINHCTTEEPDEMITGERKPRIDLFRTCVAAVP 976 (2056)
Q Consensus 901 ~~~~~~~--~~g~~~~l~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~p~~~~~~e~kpridlfrtcvaavp 976 (2056)
.--++.+ .+|+...+-- ...|.|.. .++..++++++++..|. +|+|+++|+|++||++++||+|++|||
T Consensus 507 ~~~T~e~ak~~gi~~~lp~~~~a~e~ilr------~~~r~~~~~l~~ss~~s-~k~~~~~i~~~~k~~~~lfk~~~~~ip 579 (2206)
T KOG1825|consen 507 CDLTEEIAKGHGIGQLLPKVKAAIESILR------SCHRTYSQALLSSSRTS-AKLDALGIVNKLKSQLSLFKSELKCIP 579 (2206)
T ss_pred CCchHHHhhccCHHHHHHHHHHHHHHHHH------HHHHhhhhhhccccccc-ccCchhhhccccccchhhHHHHHHhhh
Confidence 0001111 3333222110 00112221 23467889999999999 999999999999999999999999999
Q ss_pred ccccCccccchhhhhhhhhhhhhhHHHHHHhhhccccccccCCCcchhhhhhhh-c------------------------
Q psy7128 977 RLIPDAMTGGELVDLLSRLTLHMDEELRALAYQSLQTLVIDFPDWRHDVLAVFY-F------------------------ 1031 (2056)
Q Consensus 977 rl~~d~m~~~~l~~~lsr~~~h~d~elr~l~~~slq~~~~~~~~Wr~~v~~~~~-~------------------------ 1031 (2056)
|++|++|+..+++|+++|+++|+||++|..+.++||.++.++++||++|+.++. |
T Consensus 580 ~li~~~~~~~~ii~il~r~sihld~~lr~~sq~vL~~ll~~~~~~re~V~~s~~~fi~~~i~d~~~~l~~~sl~l~l~sL 659 (2206)
T KOG1825|consen 580 YLIEEVGRSDKIIEILPRNSIHLDEGLRKMSQQVLNRLLRKLPHRREYVLRSMANFILIEIPDEFALLIYLSLKLLLESL 659 (2206)
T ss_pred hhcccCcchhhHHHHHhhhheeecHHhhhccHHHHHHHHhhcCchHHHHHhhhhHHHHhhcchhhhHHHHhhHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999998862 0
Q ss_pred ----------c----c-------------------------------cc-------------------------------
Q psy7128 1032 ----------G----T-------------------------------HD------------------------------- 1035 (2056)
Q Consensus 1032 ----------~----~-------------------------------~~------------------------------- 1035 (2056)
. + |.
T Consensus 660 ~~wk~~l~~~~ks~~~ses~~~~k~~~~~~~is~~~~~~~~~t~s~~~~i~~~av~~L~~v~s~~r~~~v~~l~~ir~l~ 739 (2206)
T KOG1825|consen 660 RFWKLCLTASRKSTDASESNKTAKKETAFTKLSFTQIADQLATESPASGIDKFAVILLSSVDSLTRATAVLLLRKVRALR 739 (2206)
T ss_pred HHHHHHHhhhhccccchhhhhhhcchhhhcceeeeeccccccccchhhcccceeEEEeeccccchhHHHHHHHHHHHHHH
Confidence 0 0 00
Q ss_pred -------------------------------ccc-hhhhhhhccccccccc-cccCccCCCccccCCCCCCCCCCchhhh
Q psy7128 1036 -------------------------------MTI-DLQWIADRSASIWTAG-IHEDSNRNGSVLNLSPSCSAPDPWGFCL 1082 (2056)
Q Consensus 1036 -------------------------------~~~-dlqwl~~~s~~~~~~~-~~~~~~~~~~~~~~~~~~~~~d~w~~~l 1082 (2056)
... -+||+.|+|.-.-..- .++++...++++.+..++-.-|||+.||
T Consensus 740 i~i~~~~~d~~p~~d~~~~a~~~~~~~~~e~~~ad~~~~~i~~s~r~~~~~~~~~~i~sd~~~~~~~f~~~~k~kwg~~L 819 (2206)
T KOG1825|consen 740 IDIRDLMIDEHPDHDMKFEAEPSYHIDVLEHHGADILQSLIDDSARPSLLRLDSDTIPSDSTLWSIIFSRLDKNKWGLLL 819 (2206)
T ss_pred HhhhhhhhhcchhHHHHHhhhhhhhHHHHHHhcccceeecccCCccchhhcCCCCCCCCcceehhhhhhhhccchhhhhh
Confidence 001 2888888873332322 4566666677777665555679999999
Q ss_pred HhhhhcCcccccCccccccccchhhcccccccccccccccc
Q psy7128 1083 FQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIVPFLTT 1123 (2056)
Q Consensus 1083 ~~~~~~~~~~~~c~~~~~~~w~~~~~r~~~l~~~idp~~~~ 1123 (2056)
+.+.+...++++||.+.+++||+.+.|...-.+-+||+.+.
T Consensus 820 ~~~~~~~~l~~~c~~~~s~s~~ll~~~~~a~~~~~~~s~~q 860 (2206)
T KOG1825|consen 820 SELVKYAGLLKPCSVQESKSEILLRRAHSAPSEFGGKSNPQ 860 (2206)
T ss_pred HHHHHHhcCCCCcchhhhhhhHHHHHHhccchhccCCCccc
Confidence 99999999999999999999999999999999999998665
No 8
>PF14222 MOR2-PAG1_N: Cell morphogenesis N-terminal
Probab=99.08 E-value=2.2e-11 Score=153.74 Aligned_cols=96 Identities=33% Similarity=0.552 Sum_probs=87.6
Q ss_pred CCCCCCCCcccccccccCC-----------CCccccccCCCCcccccccccccccccccCccccchhhhhhhhhhhhhhH
Q psy7128 933 LEPPTSRSDVQCINHCTTE-----------EPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDE 1001 (2056)
Q Consensus 933 ~~~~~~~~~~~~~~~~~~k-----------~p~~~~~~e~kpridlfrtcvaavprl~~d~m~~~~l~~~lsr~~~h~d~ 1001 (2056)
+|--.|+...++..|...+ +++|+.+++ ||++||||||++||||++|++|+..+++|+|+|.++|+|+
T Consensus 407 cD~~~G~~~~~~~~~~~~~~~t~~~~f~f~~~~d~~~~~-~~~~~Lf~t~i~aiPrcL~~~i~~~~lielL~R~tvHvd~ 485 (552)
T PF14222_consen 407 CDNTFGSQLWLDEKQSSSKPKTPFSSFSFGRNDDMVTDQ-KPQLDLFRTCIQAIPRCLPSSIPFKSLIELLCRGTVHVDP 485 (552)
T ss_pred HHHHhchhhccCcccccCCCCCCcccccccccccccccc-cchhHHHHHHHHHccccCCCCCcHHHHHHHHhcccccCCH
Confidence 3456677777877777665 778999877 9999999999999999999999999999999999999999
Q ss_pred HHHHHhhhccccccccCCCcchhhhhhhh
Q psy7128 1002 ELRALAYQSLQTLVIDFPDWRHDVLAVFY 1030 (2056)
Q Consensus 1002 elr~l~~~slq~~~~~~~~Wr~~v~~~~~ 1030 (2056)
+++..|.++|+.++.+.| ||++|+.||.
T Consensus 486 ~I~~~A~~aLk~la~~~p-~~~~vi~~Fa 513 (552)
T PF14222_consen 486 NIRESAAQALKRLARDKP-NRQQVITGFA 513 (552)
T ss_pred HHHHHHHHHHHHHHHcCC-CHHHHHHHHH
Confidence 999999999999999999 9999999985
No 9
>PF13513 HEAT_EZ: HEAT-like repeat; PDB: 2Z5J_A 2OT8_B 2Z5O_A 2H4M_A 2QMR_A 1QBK_B 2Z5M_A 2Z5K_A 2Z5N_A 1GCJ_B ....
Probab=49.38 E-value=13 Score=33.73 Aligned_cols=30 Identities=43% Similarity=0.607 Sum_probs=26.4
Q ss_pred hHHHHHHHhcccccCChhhHHHHHHHhcCC
Q psy7128 1764 PTGLYKLLVPLLRCDTTDVRDAVVHALGNI 1793 (2056)
Q Consensus 1764 ar~LFklvvPlLr~e~~~IRdAvV~ALGsI 1793 (2056)
...++..++++|+.+..+||++++.|||.|
T Consensus 26 ~~~~~~~L~~~L~d~~~~VR~~A~~aLg~l 55 (55)
T PF13513_consen 26 LPELLPALIPLLQDDDDSVRAAAAWALGNL 55 (55)
T ss_dssp HHHHHHHHHHHTTSSSHHHHHHHHHHHHCH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHHHhcC
Confidence 356888889999999999999999999975
No 10
>PF02985 HEAT: HEAT repeat; InterPro: IPR000357 The HEAT repeat is a tandemly repeated, 37-47 amino acid long module occurring in a number of cytoplasmic proteins, including the four name-giving proteins huntingtin, elongation factor 3 (EF3), the 65 Kd alpha regulatory subunit of protein phosphatase 2A (PP2A) and the yeast PI3-kinase TOR1 []. Arrays of HEAT repeats consists of 3 to 36 units forming a rod-like helical structure and appear to function as protein-protein interaction surfaces. It has been noted that many HEAT repeat-containing proteins are involved in intracellular transport processes. In the crystal structure of PP2A PR65/A [], the HEAT repeats consist of pairs of antiparallel alpha helices [].; GO: 0005515 protein binding; PDB: 3FGA_A 2PF4_C 2IAE_A 2BKU_D 3EA5_B 3ND2_A 2BPT_A 2NYL_A 2NPP_D 2PKG_B ....
Probab=44.38 E-value=12 Score=30.86 Aligned_cols=26 Identities=35% Similarity=0.556 Sum_probs=21.4
Q ss_pred HHHHhcccccCChhhHHHHHHHhcCC
Q psy7128 1768 YKLLVPLLRCDTTDVRDAVVHALGNI 1793 (2056)
Q Consensus 1768 FklvvPlLr~e~~~IRdAvV~ALGsI 1793 (2056)
+-.++-+|..+++.||+||+.+||.+
T Consensus 2 lp~l~~~l~D~~~~VR~~a~~~l~~i 27 (31)
T PF02985_consen 2 LPILLQLLNDPSPEVRQAAAECLGAI 27 (31)
T ss_dssp HHHHHHHHT-SSHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHH
Confidence 45677888999999999999999965
No 11
>PTZ00470 glycoside hydrolase family 47 protein; Provisional
Probab=34.06 E-value=30 Score=45.63 Aligned_cols=16 Identities=19% Similarity=0.146 Sum_probs=7.4
Q ss_pred HHHHHHHHHHhhhhhc
Q psy7128 864 HALAGLFVEILVPVAA 879 (2056)
Q Consensus 864 ~Aycevl~eLLLPVAa 879 (2056)
..-|.-+...|+|-=.
T Consensus 177 L~kA~dLgd~Ll~AFd 192 (522)
T PTZ00470 177 LEKAREIADRLLPAFN 192 (522)
T ss_pred HHHHHHHHHHHHHhhc
Confidence 3444444455555443
No 12
>KOG1824|consensus
Probab=32.26 E-value=8.6e+02 Score=34.95 Aligned_cols=207 Identities=19% Similarity=0.253 Sum_probs=0.0
Q ss_pred HHHHHHHhcccccCChhhHHHHHHHhcC----CCHHHHHHHHHHHHHHHHHHHhhhccchhhhcchhhHHHH---HHHHH
Q psy7128 1765 TGLYKLLVPLLRCDTTDVRDAVVHALGN----INSEALKDLMEELSVYIREAVDRKTENMRRRRRRDALRLQ---LVRVF 1837 (2056)
Q Consensus 1765 r~LFklvvPlLr~e~~~IRdAvV~ALGs----IN~~ayr~LLEEL~~~v~EA~dRk~sn~RRrrRrD~LRle---I~hV~ 1837 (2056)
..+.+.++|-|.|....||-=+|.|||| +|-++|..+.|+|-- +.-.+..+..+|+- +.-|.
T Consensus 173 ~~il~~l~~ql~s~R~aVrKkai~~l~~la~~~~~~ly~~li~~Ll~-----------~L~~~~q~~~~rt~Iq~l~~i~ 241 (1233)
T KOG1824|consen 173 LSILKCLLPQLQSPRLAVRKKAITALGHLASSCNRDLYVELIEHLLK-----------GLSNRTQMSATRTYIQCLAAIC 241 (1233)
T ss_pred HHHHHHHhhcccChHHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHh-----------ccCCCCchHHHHHHHHHHHHHH
Q ss_pred HHhhccCccCCCCCCCcchhHHHHHHHHHHHHHhcchhhhHHHHHHHHHHHHHHHHHHhcCCCccccccCCHHHHHHHHH
Q psy7128 1838 ELIAEHGTFGACSPTMPGLLSPLAEYVDGARLCLELEADKQILREIKAHFCNFVCKMIHSFPLESRQTLLKRDLRRNLFS 1917 (2056)
Q Consensus 1838 eltAe~gvf~~~~~~~~~l~~~lveyIkd~R~fL~~E~d~D~lq~LR~hFc~lve~Li~~~~~~~~~~~f~~elRksLF~ 1917 (2056)
+-.-++ |+.+. +.+...+++|..-. |.+-| +||-+--..++.+...-|.+--+.| ..+-.
T Consensus 242 r~ag~r--~~~h~---~~ivp~v~~y~~~~------e~~dD---ELrE~~lQale~fl~rcp~ei~p~~------pei~~ 301 (1233)
T KOG1824|consen 242 RQAGHR--FGSHL---DKIVPLVADYCNKI------EEDDD---ELREYCLQALESFLRRCPKEILPHV------PEIIN 301 (1233)
T ss_pred HHhcch--hhccc---chhhHHHHHHhccc------ccCcH---HHHHHHHHHHHHHHHhChhhhcccc------hHHHH
Q ss_pred HHHhhhcCCCCCccccccccccCCCCCCCCCCh-----hhhhhhHHHHHHHHHHHHHHHhcc------------CCCcCC
Q psy7128 1918 LFTSWAGQYGRNLNITQSYSVSMPNPPASNPGP-----EALKTSEEELQLTSLSAMSAVLTC------------GPVFDP 1980 (2056)
Q Consensus 1918 Lf~~WcG~~g~~~~~~~rre~~mr~~~~s~r~~-----aa~e~e~~~Lq~aAL~AMAAvLC~------------GPifd~ 1980 (2056)
|..++-.| .+|..-.....+..-...+.+..+ ...|...=.++.||.++.+||... ||..+
T Consensus 302 l~l~yisY-DPNy~yd~~eDed~~~~ed~eDde~~deYsDDeD~SWkVRRaAaKcl~a~IsSR~E~L~~~~q~l~p~lI- 379 (1233)
T KOG1824|consen 302 LCLSYISY-DPNYNYDTEEDEDAMFLEDEEDDEQDDEYSDDEDMSWKVRRAAAKCLEAVISSRLEMLPDFYQTLGPALI- 379 (1233)
T ss_pred HHHHHhcc-CCCCCCCCccchhhhhhhccccchhccccccccchhHHHHHHHHHHHHHHHhccHHHHHHHHHHhCHHHH-
Q ss_pred CcccCCCcchHHHHHHHhcCCchhHHHHHHHHHHHHHHh
Q psy7128 1981 STLLAEDGVLYPWLDMLLASSEEKTYQIGCQTVILLLEC 2019 (2056)
Q Consensus 1981 ~~~~~edG~ll~WID~If~S~s~r~~~igr~AL~nLL~~ 2019 (2056)
+=|....+-+....-.|.+.||.+
T Consensus 380 ---------------~RfkEREEnVk~dvf~~yi~ll~q 403 (1233)
T KOG1824|consen 380 ---------------SRFKEREENVKADVFHAYIALLKQ 403 (1233)
T ss_pred ---------------HHHHHHhhhHHHHHHHHHHHHHHc
No 13
>cd00020 ARM Armadillo/beta-catenin-like repeats. An approximately 40 amino acid long tandemly repeated sequence motif first identified in the Drosophila segment polarity gene armadillo; these repeats were also found in the mammalian armadillo homolog beta-catenin, the junctional plaque protein plakoglobin, the adenomatous polyposis coli (APC) tumor suppressor protein, and a number of other proteins. ARM has been implicated in mediating protein-protein interactions, but no common features among the target proteins recognized by the ARM repeats have been identified; related to the HEAT domain; three consecutive copies of the repeat are represented by this alignment model.
Probab=26.93 E-value=1.1e+02 Score=30.49 Aligned_cols=92 Identities=22% Similarity=0.133 Sum_probs=61.5
Q ss_pred HHHHHHHHHHHHHHhccC-CCcCCCcccCCCcchHHHHHHHhcCCchhHHHHHHHHHHHHHHhCCCCc------hhHHHH
Q psy7128 1958 EELQLTSLSAMSAVLTCG-PVFDPSTLLAEDGVLYPWLDMLLASSEEKTYQIGCQTVILLLECNPDMG------PLLDWV 2030 (2056)
Q Consensus 1958 ~~Lq~aAL~AMAAvLC~G-Pifd~~~~~~edG~ll~WID~If~S~s~r~~~igr~AL~nLL~~N~d~~------~LLe~~ 2030 (2056)
.+++..|+.+++. +|.+ |.-.. ...+.| ++..+=.++.++++++..-+..||.||...+++.. .+++..
T Consensus 21 ~~~~~~a~~~l~~-l~~~~~~~~~--~~~~~~-~i~~l~~~l~~~~~~v~~~a~~~L~~l~~~~~~~~~~~~~~g~l~~l 96 (120)
T cd00020 21 ENVQREAAWALSN-LSAGNNDNIQ--AVVEAG-GLPALVQLLKSEDEEVVKAALWALRNLAAGPEDNKLIVLEAGGVPKL 96 (120)
T ss_pred HHHHHHHHHHHHH-HhcCCHHHHH--HHHHCC-ChHHHHHHHhCCCHHHHHHHHHHHHHHccCcHHHHHHHHHCCChHHH
Confidence 5688899999988 8877 33221 112223 45555567788899999999999999987664321 146666
Q ss_pred HHhhcCCCccchhhHHHHHHHHh
Q psy7128 2031 VDRCYTASVQVADGCFLALATLF 2053 (2056)
Q Consensus 2031 IdrCYt~~~~vA~GcF~aLa~Vf 2053 (2056)
+...-..+..+......+|.+++
T Consensus 97 ~~~l~~~~~~~~~~a~~~l~~l~ 119 (120)
T cd00020 97 VNLLDSSNEDIQKNATGALSNLA 119 (120)
T ss_pred HHHHhcCCHHHHHHHHHHHHHhh
Confidence 66666666666666666666654
No 14
>PF03130 HEAT_PBS: PBS lyase HEAT-like repeat; InterPro: IPR004155 These proteins contain a short bi-helical repeat that is related to HEAT. Cyanobacteria and red algae harvest light energy using macromolecular complexes known as phycobilisomes (PBS), peripherally attached to the photosynthetic membrane. The major components of PBS are the phycobiliproteins. These heterodimeric proteins are covalently attached to phycobilins: open-chain tetrapyrrole chromophores, which function as the photosynthetic light-harvesting pigments. Phycobiliproteins differ in sequence and in the nature and number of attached phycobilins to each of their subunits. These proteins include the lyase enzymes that specifically attach particular phycobilins to apophycobiliprotein subunits. The most comprehensively studied of these is the CpcE/Flyase P31967 from SWISSPROT, P31968 from SWISSPROT, which attaches phycocyanobilin (PCB) to the alpha subunit of apophycocyanin []. Similarly, MpeU/V attaches phycoerythrobilin to phycoerythrin II, while CpeY/Z is thought to be involved in phycoerythrobilin (PEB) attachment to phycoerythrin (PE) I (PEs I and II differ in sequence and in the number of attached molecules of PEB: PE I has five, PE II has six) []. All the reactions of the above lyases involve an apoprotein cysteine SH addition to a terminal delta 3,3'-double bond. Such a reaction is not possible in the case of phycoviolobilin (PVB), the phycobilin of alpha-phycoerythrocyanin (alpha-PEC). It is thought that in this case, PCB, not PVB, is first added to apo-alpha-PEC, and is then isomerized to PVB. The addition reaction has been shown to occur in the presence of either of the components of alpha-PEC-PVB lyase PecE or PecF (or both). The isomerisation reaction occurs only when both PecE and PecF components are present, i.e. the PecE/F phycobiliprotein lyase is also a phycobilin isomerase []. Another member of this family is the NblB protein, whose similarity to the phycobiliprotein lyases was previously noted []. This constitutively expressed protein is not known to have any lyase activity. It is thought to be involved in the coordination of PBS degradation with environmental nutrient limitation. It has been suggested that the similarity of NblB to the phycobiliprotein lyases is due to the ability to bind tetrapyrrole phycobilins via the common repeated motif [].; PDB: 1TE4_A.
Probab=25.80 E-value=67 Score=26.05 Aligned_cols=25 Identities=44% Similarity=0.648 Sum_probs=19.8
Q ss_pred hHHHHHHHhcCCCH-HHHHHHHHHHH
Q psy7128 1782 VRDAVVHALGNINS-EALKDLMEELS 1806 (2056)
Q Consensus 1782 IRdAvV~ALGsIN~-~ayr~LLEEL~ 1806 (2056)
||.+++.|||.+.. .+...|++-|+
T Consensus 1 VR~~Aa~aLg~igd~~ai~~L~~~L~ 26 (27)
T PF03130_consen 1 VRRAAARALGQIGDPRAIPALIEALE 26 (27)
T ss_dssp HHHHHHHHHGGG-SHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHcCCHHHHHHHHHHhc
Confidence 69999999999987 67777777664
No 15
>PF13646 HEAT_2: HEAT repeats; PDB: 1OYZ_A 3FGA_A 2PF4_C 2IAE_A 3B2A_A.
Probab=24.71 E-value=76 Score=30.66 Aligned_cols=30 Identities=33% Similarity=0.430 Sum_probs=26.3
Q ss_pred HHHHHHhcccccCChhhHHHHHHHhcCCCH
Q psy7128 1766 GLYKLLVPLLRCDTTDVRDAVVHALGNINS 1795 (2056)
Q Consensus 1766 ~LFklvvPlLr~e~~~IRdAvV~ALGsIN~ 1795 (2056)
+....++.+|+.+++.||.+|+.|||.+..
T Consensus 31 ~~~~~L~~~l~d~~~~vr~~a~~aL~~i~~ 60 (88)
T PF13646_consen 31 EAIPALIELLKDEDPMVRRAAARALGRIGD 60 (88)
T ss_dssp HHHHHHHHHHTSSSHHHHHHHHHHHHCCHH
T ss_pred hHHHHHHHHHcCCCHHHHHHHHHHHHHhCC
Confidence 567888888899999999999999999953
No 16
>KOG0151|consensus
Probab=23.11 E-value=7.3e+02 Score=34.40 Aligned_cols=45 Identities=22% Similarity=0.256 Sum_probs=36.8
Q ss_pred ChHHHHHHHhcccccCChhhHHHHHHHhcCCCHH--HHHHHHHHHHH
Q psy7128 1763 SPTGLYKLLVPLLRCDTTDVRDAVVHALGNINSE--ALKDLMEELSV 1807 (2056)
Q Consensus 1763 Sar~LFklvvPlLr~e~~~IRdAvV~ALGsIN~~--ayr~LLEEL~~ 1807 (2056)
.-|+=|--+|--|.+|-.+|.||.|.||-+.+.+ +++-+.|+|..
T Consensus 431 ~qRdklE~liR~LTpEk~sIg~aM~FalenA~aa~EI~eci~eSlt~ 477 (877)
T KOG0151|consen 431 LQRDKLEDLIRGLTPEKSSIGDAMVFALENADAAGEIVECITESLTN 477 (877)
T ss_pred HHHHHHHHHHHhcCcccchHHHHHHHHHhhhhhHHHHHHHHHHHHhc
Confidence 3467788889999999999999999999998875 66666666643
No 17
>PTZ00470 glycoside hydrolase family 47 protein; Provisional
Probab=21.08 E-value=87 Score=41.56 Aligned_cols=19 Identities=21% Similarity=0.538 Sum_probs=14.4
Q ss_pred HHhcccceeEeeccchHHHHHHHHHHHH
Q psy7128 822 SLLMGMKFFRVKMVPIEEFEASFQFMQE 849 (2056)
Q Consensus 822 ~LI~GMRyLrIK~yP~E~fEeSadFMqs 849 (2056)
+.|||++ |+|+++.+|+..
T Consensus 121 L~IMgl~---------~Ef~~a~~~V~~ 139 (522)
T PTZ00470 121 LKIMGLK---------KEYKEGRDWVAN 139 (522)
T ss_pred HHHcCCh---------HHHHHHHHHHHh
Confidence 3678887 788888888764
No 18
>PF14228 MOR2-PAG1_mid: Cell morphogenesis central region
Probab=20.86 E-value=49 Score=47.24 Aligned_cols=73 Identities=22% Similarity=0.393 Sum_probs=50.8
Q ss_pred CCCCchhhhHhhhhcCcccccCccccccccchhhcccccccccccccccccccccccccccchhhHHHHHHHHHh-hhee
Q psy7128 1074 APDPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIVPFLTTHSFTLISANSFICFPLAESLYRLLW-VYMI 1152 (2056)
Q Consensus 1074 ~~d~w~~~l~~~~~~~~~~~~c~~~~~~~w~~~~~r~~~l~~~idp~~~~~~~~li~~~~~~r~~~l~~l~rLlW-~Yl~ 1152 (2056)
....|.-||..|++. .-..||.+|+.+|-++.+|+..+.+ +|...+++ ....+ .+..=.| .||+
T Consensus 112 DstlW~r~fp~lir~--~fe~CP~tval~R~~v~~RL~~i~~-~~l~~k~~---------~s~~~---e~~ieQWKlYLI 176 (1120)
T PF14228_consen 112 DSTLWFRCFPNLIRI--AFERCPFTVALCRSEVCQRLQQITP-IELGSKSS---------QSTDP---EVLIEQWKLYLI 176 (1120)
T ss_pred chHHHHHHHHHHHHH--HHHhCcHHHHHHHHHHHHHhccCCc-hhccCccC---------CCCCc---cHHHHHHHHHHH
Confidence 455799999999866 4568999999999999999988654 45443322 01111 3455678 8998
Q ss_pred eccCCCChhH
Q psy7128 1153 RIKCESNSAT 1162 (2056)
Q Consensus 1153 R~~~es~s~t 1162 (2056)
-. |-++..+
T Consensus 177 fA-Cttp~~s 185 (1120)
T PF14228_consen 177 FA-CTTPTDS 185 (1120)
T ss_pred HH-hcCCCcC
Confidence 77 7555443
Done!