Your job contains 1 sequence.
>psy7128
MLIWLARPEPQSTIVRTCACIGHPNVLHVPFVKPPLTEMKTEKAESKGNTEAAQSPSMKP
PPEKKPAIKDACLVNRRVWVQYQPRWLKFYLPLFHVSCLLSVVSYLPVAENDNPSVGGGG
SVMGDSESRSDVTDGSSQVTSRTDCDTPDSSVTVLPWAGGQRGGRAATCGTAADSGNNVR
PGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISKYVFHTRTMSFAIFHTMLYLCLWVLH
VQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAFEE
VNSLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVDMLLSELTRHFPVPP
VPQAPQQNTQGNSVPMRRIENGYFLNVTTVFDNLLQPSAFEEGVFHPLNFSSMNEDENDN
PSVGGGGSVMGDSESRSDVTDGSSQVTSRTDCDTPGNFVQKEVTLTREILSRNRRMKEDR
IGKSQPSRSENEPHLCRMKFVPRDSSVTVLPWAGGQRGGRAATCGTAADSSNNVRPGEYV
MRSLFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCLPSILR
ALFAWYERQMRPSVEAAANPHISSNNNNNNNNNNNNNNNNNNNNNNNNNNNPVVIFLDKA
YKGPSHVAKSGRKCFGTESGPSKILMLRPFRRVQEHTVLHEQYFRLRTKEAETILQERRD
LAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDPNATNIHTVADL
YAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRVKMVPIEEF
EASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFIPIVSSSQGKRRR
VRGSESITLGLIDPLRASSNDDIHSECKQGLGLEPPTSRSDVQCINHCTTEEPDEMITGE
RKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQSLQTLVIDFPD
WRHDVLAVFYFGTHDMTIDLQWIADRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGF
CLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIVPFLTTHSFTLISANSFICFPLA
ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQ
ERLDFAMREIVFDLLSVGRPIKLILTPERMSIGLRAFLVVADSLQQKEGEPPMPRTSGVL
PSGNTLRVKKTYLNKVSKTYLILLLFYRFDGGNCNNRDVNRGHSALYRDVCVLPSCETRV
CRYLESVGHPLRASSNDDIHSECKQVLGHAPLVLGPAPLVLSPAPLVLDHAHLVLGHASL
VLDNAHLVFGHAHLVLGHASLVLDNAHLVFGHAHSNSNLSNLTRSQVFHQVEGFALVMLC
NVRLTPRRLSVHILREVKMLNKVLGLGLEPPTSRSDVQCIDHCTTDVMQCKTHTSETQCS
YPTRGENVEQSSRLCTQELRNWIRPSEQPPWPSCSEHADQNVIDVIDKACPDILDQCMSQ
LTCADKTAALSASCIDLQWIADRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGFCLF
QFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIGKKTSYCALTYYFLLSSLTDPTPVSD
NRASLLRSSAPPRKPVSERDSFLSLWRYLAIFSARVVPPVPYPTPRCASPDLSLSWSPEN
VGGERGGAGVENKPAPTASPPPSPTGLYKLLVPLLRCDTTDVRDAVVHALGNINSEALKD
LMEELSVYIREAVDRKTENMRRRRRRDALRLQLVRVFELIAEHGTFGACSPTMPGLLSPL
AEYVDGARLCLELEADKQILREIKAHFCNFVCKMIHSFPLESRQTLLKRDLRRNLFSLFT
SWAGQYGRNLNITQSYSVSMPNPPASNPGPEALKTSEEELQLTSLSAMSAVLTCGPVFDP
STLLAEDGVLYPWLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTASVQ
VADGCFLALATLFSAR
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7128
(2056 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0016081 - symbol:fry "furry" species:7227 "Drosoph... 825 3.4e-224 6
UNIPROTKB|O94915 - symbol:FRYL "Protein furry homolog-lik... 642 3.0e-192 6
MGI|MGI:2443895 - symbol:Fry "furry homolog (Drosophila)"... 622 4.6e-187 5
UNIPROTKB|Q5TBA9 - symbol:FRY "Protein furry homolog" spe... 626 7.9e-186 5
WB|WBGene00004728 - symbol:sax-2 species:6239 "Caenorhabd... 399 1.0e-112 6
RGD|1310296 - symbol:Med6 "mediator complex subunit 6" sp... 352 9.2e-34 3
UNIPROTKB|E1BZ92 - symbol:MED6 "Mediator of RNA polymeras... 349 1.5e-33 3
UNIPROTKB|Q3SZY9 - symbol:MED6 "Mediator of RNA polymeras... 354 1.9e-33 3
UNIPROTKB|E2R2L6 - symbol:MED6 "Mediator of RNA polymeras... 352 2.4e-33 3
FB|FBgn0024330 - symbol:MED6 "Mediator complex subunit 6"... 377 3.5e-33 1
MGI|MGI:1917042 - symbol:Med6 "mediator of RNA polymerase... 350 1.0e-32 3
UNIPROTKB|F1S496 - symbol:MED6 "Mediator of RNA polymeras... 353 1.1e-31 2
CGD|CAL0000189 - symbol:CAS4 species:5476 "Candida albica... 277 1.7e-31 5
UNIPROTKB|Q5AJA0 - symbol:CAS4 "Potential regulator of po... 277 1.7e-31 5
ZFIN|ZDB-GENE-040625-61 - symbol:med6 "mediator complex s... 361 1.7e-31 1
UNIPROTKB|H9KYN6 - symbol:H9KYN6 "Uncharacterized protein... 349 3.3e-30 1
UNIPROTKB|G3V4A5 - symbol:MED6 "Mediator of RNA polymeras... 349 3.3e-30 1
UNIPROTKB|O75586 - symbol:MED6 "Mediator of RNA polymeras... 349 3.3e-30 1
ASPGD|ASPL0000058064 - symbol:AN0594 species:162425 "Emer... 179 4.6e-29 6
DICTYBASE|DDB_G0275305 - symbol:DDB_G0275305 "unknown" sp... 179 1.1e-28 6
UNIPROTKB|B4DU17 - symbol:MED6 "Mediator of RNA polymeras... 328 5.6e-28 1
UNIPROTKB|B4E2P0 - symbol:MED6 "cDNA FLJ59149, highly sim... 276 1.9e-22 1
WB|WBGene00003164 - symbol:mdt-6 species:6239 "Caenorhabd... 231 7.5e-19 2
UNIPROTKB|Q9N337 - symbol:mdt-6 "Mediator of RNA polymera... 231 7.5e-19 2
SGD|S000001391 - symbol:TAO3 "Component of the RAM signal... 186 5.4e-18 6
POMBASE|SPBP19A11.04c - symbol:mor2 "morphogenesis protei... 131 3.0e-12 5
TAIR|locus:2143216 - symbol:AT5G15680 species:3702 "Arabi... 142 4.7e-10 5
CGD|CAL0005486 - symbol:orf19.7420 species:5476 "Candida ... 163 8.3e-09 1
POMBASE|SPAC1002.15c - symbol:pmc5 "mediator complex subu... 142 7.8e-07 1
SGD|S000001100 - symbol:MED6 "Subunit of the RNA polymera... 144 2.1e-06 1
TAIR|locus:2089488 - symbol:MED6 species:3702 "Arabidopsi... 144 2.1e-06 1
DICTYBASE|DDB_G0284421 - symbol:med6 "putative mediator c... 137 6.2e-05 2
>FB|FBgn0016081 [details] [associations]
symbol:fry "furry" species:7227 "Drosophila melanogaster"
[GO:0042052 "rhabdomere development" evidence=IMP] [GO:0035316
"non-sensory hair organization" evidence=IMP] [GO:0008407 "chaeta
morphogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IGI] [GO:0048800 "antennal
morphogenesis" evidence=IMP] [GO:0045860 "positive regulation of
protein kinase activity" evidence=IMP] [GO:0048814 "regulation of
dendrite morphogenesis" evidence=IMP] [GO:0050773 "regulation of
dendrite development" evidence=IMP] [GO:0005938 "cell cortex"
evidence=IDA] [GO:0035317 "imaginal disc-derived wing hair
organization" evidence=IGI] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0048601
"oocyte morphogenesis" evidence=IDA] [GO:0070593 "dendrite
self-avoidance" evidence=IGI] [GO:0045177 "apical part of cell"
evidence=IDA] InterPro:IPR016024 GO:GO:0005938 GO:GO:0045893
EMBL:AE014296 SUPFAM:SSF48371 GO:GO:0045177 GO:GO:0045860
GO:GO:0006351 GO:GO:0048814 GO:GO:0008407 GO:GO:0042052
GO:GO:0048800 GO:GO:0070593 eggNOG:NOG282247 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222 EMBL:AF310159
EMBL:AF351187 EMBL:AY069860 RefSeq:NP_001036598.1
RefSeq:NP_729520.1 UniGene:Dm.1919 IntAct:Q9VT28 STRING:Q9VT28
PaxDb:Q9VT28 EnsemblMetazoa:FBtr0076417 GeneID:39122
KEGG:dme:Dmel_CG32045 CTD:10129 FlyBase:FBgn0016081
GeneTree:ENSGT00610000086058 InParanoid:Q9VT28 OrthoDB:EOG4573NC
PhylomeDB:Q9VT28 ChiTaRS:FRY GenomeRNAi:39122 NextBio:812033
Bgee:Q9VT28 GO:GO:0035317 GO:GO:0048601 Uniprot:Q9VT28
Length = 3479
Score = 825 (295.5 bits), Expect = 3.4e-224, Sum P(6) = 3.4e-224
Identities = 206/463 (44%), Positives = 266/463 (57%)
Query: 1499 CSYPTRGENVEQSSRLCTQELRNWIR----PSEQPPWPSCSEHADQNVIDVIDKACPDIL 1554
C+Y T + + + L +E++N +R P +PP +IDV+D+ P I+
Sbjct: 1042 CNYRTY---LRKLAALILKEVKNLMRALGIPETEPP-----------LIDVMDRCVPGII 1087
Query: 1555 DQCMSQLTCADKTAALSASCIDLQWIADRSASIWTAGIHEDSNRNG-SVLNLSPSCSAP- 1612
++C+ QL +KTA L+A+CIDLQWIA+RS+ +W AG+ +D++++ S LNLS S S P
Sbjct: 1088 EKCLPQLPQTEKTAILNANCIDLQWIAERSSGVWLAGLTDDNSKSSTSTLNLSQSSSTPN 1147
Query: 1613 -------------DPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIGKKTS 1659
DPW CLF L++ VL CPSAVAQAWPI ++RL+ L+
Sbjct: 1148 ASATAASSPQLPFDPWATCLFGLLERQNVLQQCPSAVAQAWPICFTRLNALY-------- 1199
Query: 1660 YCALTYYFLLSSLTDPTPVSDNRASLLRSSAPPRK-PV-SERDSFLSLWRYLAIFSARXX 1717
S+ DPTPVSDNRASLLRSSAP +K P S++DS+L LWR + R
Sbjct: 1200 -----------SVIDPTPVSDNRASLLRSSAPTKKVPTESQKDSYLRLWRNQVACAMRLV 1248
Query: 1718 XXXXXXXXRCASPDLSLSWSPENVGGERGGAGVENKXXXXXXXXXXXXGLYKLLVPLLRC 1777
RCASPDLSLS SP+++ +R +K LYKL+VPLLRC
Sbjct: 1249 PQIPSVAVRCASPDLSLSSSPDSLNADRS-----DKSAMGSASPQA---LYKLVVPLLRC 1300
Query: 1778 DTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTENMXXXXXXXXXXXXXXXVF 1837
+ DVRDA V+ALG IN +ALKDLMEEL VYIREAVD K ENM V
Sbjct: 1301 EVVDVRDAAVNALGLINHDALKDLMEELVVYIREAVDCKQENMRRRRRRDALRLQVVRVL 1360
Query: 1838 ELIAEHGTFGA--C---SPTMPGLLSPLAEYVDGARLCLELEADKQIL--REIKAHFCNF 1890
E IAE+GTFG C TM L Y+ GA L E DK L RE+KAHFCNF
Sbjct: 1361 EKIAENGTFGVSTCVLERDTM-SLHPTFVLYISGAMGYLTSETDKDNLSIREVKAHFCNF 1419
Query: 1891 VCKMIHSFPLESRQTLLKRDLRRNLFSLFTSWAGQYGRNLNIT 1933
+ KMI +FPLE+ TLL R L+RNLF+LF +W G + + L T
Sbjct: 1420 IRKMIKNFPLEACATLLSRVLKRNLFNLFAAWCGSFSKPLGYT 1462
Score = 716 (257.1 bits), Expect = 3.4e-224, Sum P(6) = 3.4e-224
Identities = 138/177 (77%), Positives = 157/177 (88%)
Query: 717 ERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDPNATNIHT 776
+RR+ AVEF+FCL LIE+LKQLP+HPGH++LV IE +AFKHFKY++G+QN+PNA NIH
Sbjct: 389 QRREAAVEFIFCLALIEILKQLPYHPGHEDLVRSIENLAFKHFKYKDGLQNNPNALNIHM 448
Query: 777 VADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRVKMVP 836
+ADLYAEV+GVLAQSRF SVRKRFMSELKELR KE + TTQSIISLLMGMKFFRVKMVP
Sbjct: 449 IADLYAEVIGVLAQSRFASVRKRFMSELKELRGKEVSPTTTQSIISLLMGMKFFRVKMVP 508
Query: 837 IEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFIPIVSS 893
IEEFEASFQFM EC QYF +VKDKD+KHALAGLFVEILVPVAA VKNEV +P V +
Sbjct: 509 IEEFEASFQFMHECGQYFLEVKDKDIKHALAGLFVEILVPVAAAVKNEVN-VPCVKN 564
Score = 691 (248.3 bits), Expect = 1.2e-218, Sum P(6) = 1.2e-218
Identities = 153/297 (51%), Positives = 190/297 (63%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTENMXXXXXX 1826
LYKL+VPLLRC+ DVRDA V+ALG IN +ALKDLMEEL VYIREAVD K ENM
Sbjct: 1290 LYKLVVPLLRCEVVDVRDAAVNALGLINHDALKDLMEELVVYIREAVDCKQENMRRRRRR 1349
Query: 1827 XXXXXXXXXVFELIAEHGTFGA--C---SPTMPGLLSPLAEYVDGARLCLELEADKQIL- 1880
V E IAE+GTFG C TM L Y+ GA L E DK L
Sbjct: 1350 DALRLQVVRVLEKIAENGTFGVSTCVLERDTM-SLHPTFVLYISGAMGYLTSETDKDNLS 1408
Query: 1881 -REIKAHFCNFVCKMIHSFPLESRQTLLKRDLRRNLFSLFTSWAGQYGRNLNITQSYSVS 1939
RE+KAHFCNF+ KMI +FPLE+ TLL R L+RNLF+LF +W G + + L T +
Sbjct: 1409 IREVKAHFCNFIRKMIKNFPLEACATLLSRVLKRNLFNLFAAWCGSFSKPLGYTMQSDHT 1468
Query: 1940 MPNPPASNPGPEALKTSEEELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVLYPWLDMLLA 1999
+ EE+LQ ++L AMSA+L CG +F+PS L +D ++Y WLDMLL
Sbjct: 1469 L---------------EEEKLQFSALQAMSALLCCGQIFNPS-YLQDDSIIYKWLDMLLT 1512
Query: 2000 SSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALATLFSAR 2056
S EK YQ+ TV+LLLE NPD+G LL+WV+DRCYT++ + AD CFLALA++FSA+
Sbjct: 1513 SKNEKIYQLARDTVVLLLESNPDIGQLLEWVIDRCYTSTPREADACFLALASIFSAK 1569
Score = 604 (217.7 bits), Expect = 3.4e-224, Sum P(6) = 3.4e-224
Identities = 125/143 (87%), Positives = 131/143 (91%)
Query: 1141 ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQ 1200
ESL+RLLWVYMIRIKCESNSAT SRLQSIVNSLFPKGSK VVPRDTPLNIFVKIIQFIAQ
Sbjct: 630 ESLFRLLWVYMIRIKCESNSATHSRLQSIVNSLFPKGSKGVVPRDTPLNIFVKIIQFIAQ 689
Query: 1201 ERLDFAMREIVFDLLSVGRPIKLILTPERMSIGLRAFLVVADSLQQKEGEPPMPRTSGVL 1260
ERLDFAMREIV+DLL VGR IKLIL PERMSIGLRAFLVVADSLQQK GEPPMPRT VL
Sbjct: 690 ERLDFAMREIVYDLLCVGRSIKLILNPERMSIGLRAFLVVADSLQQKAGEPPMPRTVPVL 749
Query: 1261 PSGNTLRVKKTYLNKVSKTYLIL 1283
PSGNTLRVKKT+ NK+ Y++L
Sbjct: 750 PSGNTLRVKKTF-NKM---YVLL 768
Score = 325 (119.5 bits), Expect = 8.1e-199, Sum P(6) = 8.1e-199
Identities = 64/88 (72%), Positives = 74/88 (84%)
Query: 951 EEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQS 1010
+EPDEM++GERKPRIDLFRTCVAAVPRLIPD MT ELVD+LSRL++HMDEELR L +QS
Sbjct: 814 KEPDEMLSGERKPRIDLFRTCVAAVPRLIPDTMTPHELVDMLSRLSVHMDEELRILTHQS 873
Query: 1011 LQTLVIDFPDWRHDVLAVF-YFGTHDMT 1037
L TLVIDFPDWR DV+ + F D+T
Sbjct: 874 LTTLVIDFPDWRQDVVHGYTQFLVRDVT 901
Score = 278 (102.9 bits), Expect = 3.4e-224, Sum P(6) = 3.4e-224
Identities = 58/108 (53%), Positives = 71/108 (65%)
Query: 503 RDSSVTVLPWXXXXXXXXXXXXXXXXDSSNNVRPGEYVMRSLFADFTAQAEKKLDQVLAE 562
R S + VLP ++S RPGE VMR+LF+DFTAQAEKK++ V+ E
Sbjct: 248 RSSIINVLPSYTQAEMHALAARVASVETSAP-RPGEIVMRNLFSDFTAQAEKKIELVMLE 306
Query: 563 PQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCLPSILRALFAWYERQM 610
+K LSK+LQRGED FDQLL A GSVAEHCLPS+L L AW+ RQ+
Sbjct: 307 SADKNLSKLLQRGEDQQFDQLLSALGSVAEHCLPSLLHTLLAWHRRQL 354
Score = 218 (81.8 bits), Expect = 8.1e-199, Sum P(6) = 8.1e-199
Identities = 46/97 (47%), Positives = 61/97 (62%)
Query: 1038 IDLQWIADRSASIWTAGIHEDSNRNG-SVLNLSPSCSAP--------------DPWGFCL 1082
IDLQWIA+RS+ +W AG+ +D++++ S LNLS S S P DPW CL
Sbjct: 1108 IDLQWIAERSSGVWLAGLTDDNSKSSTSTLNLSQSSSTPNASATAASSPQLPFDPWATCL 1167
Query: 1083 FQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIVP 1119
F L++ VL CPSAVAQAWPI ++RL+ L+ I P
Sbjct: 1168 FGLLERQNVLQQCPSAVAQAWPICFTRLNALYSVIDP 1204
Score = 128 (50.1 bits), Expect = 1.2e-218, Sum P(6) = 1.2e-218
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 1407 HLVFGHAHSNSNLSNLTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGL 1466
H V A + + + H VEGFALV+LCN R R+L+ IL+EVK L + LG+
Sbjct: 1009 HTVLNMASDVGKKNEIPLATTLHFVEGFALVLLCNYRTYLRKLAALILKEVKNLMRALGI 1068
Query: 1467 G-LEPPTSRSDVQCIDHCTTDVMQ-CKTHTSETQ 1498
EPP + +D C +++ C +T+
Sbjct: 1069 PETEPPL----IDVMDRCVPGIIEKCLPQLPQTE 1098
Score = 109 (43.4 bits), Expect = 2.2e-202, Sum P(5) = 2.2e-202
Identities = 22/36 (61%), Positives = 29/36 (80%)
Query: 180 RPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISK 215
RPGE VMR+LF+DFTAQAEKK++ V+ E + +SK
Sbjct: 279 RPGEIVMRNLFSDFTAQAEKKIELVMLESADKNLSK 314
Score = 50 (22.7 bits), Expect = 1.2e-97, Sum P(4) = 1.2e-97
Identities = 20/84 (23%), Positives = 33/84 (39%)
Query: 1397 GHASLVLDNAHLVFGHAHSNSNLSNLTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILRE 1456
GH LV +L F H L N + H + ++ V R SV R
Sbjct: 415 GHEDLVRSIENLAFKHFKYKDGLQNNPNALNIHMIADLYAEVI-GVLAQSRFASVR-KRF 472
Query: 1457 VKMLNKVLGLGLEPPTSRSDVQCI 1480
+ L ++ G + P T++S + +
Sbjct: 473 MSELKELRGKEVSPTTTQSIISLL 496
Score = 41 (19.5 bits), Expect = 3.4e-224, Sum P(6) = 3.4e-224
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 1448 RLSVHILREVKMLN--KVLGLGLEPPTSRSDV 1477
RLSVH+ E+++L + L ++ P R DV
Sbjct: 857 RLSVHMDEELRILTHQSLTTLVIDFPDWRQDV 888
Score = 41 (19.5 bits), Expect = 8.4e-131, Sum P(6) = 8.4e-131
Identities = 11/36 (30%), Positives = 20/36 (55%)
Query: 1131 ANSFICFPLAESLYRLLWVYMIRIKCESNSATQSRL 1166
A++ + L SLY+L++ ++ I ESN S +
Sbjct: 3255 ASTEVVLDLGRSLYKLMFQLLLLI--ESNHKISSNV 3288
Score = 39 (18.8 bits), Expect = 3.4e-224, Sum P(6) = 3.4e-224
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 250 RKQHRHSMEQTTPIADYYIIAGVVYQA 276
++Q + +Q P+ D + V YQ+
Sbjct: 192 QQQQQQQQQQQLPVGDVEQSSAVTYQS 218
Score = 38 (18.4 bits), Expect = 3.2e-150, Sum P(6) = 3.2e-150
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 2030 VVDRCYTASVQVADGCFLALATLFS 2054
V+ +C +A Q CF L L+S
Sbjct: 1176 VLQQCPSAVAQAWPICFTRLNALYS 1200
Score = 38 (18.4 bits), Expect = 6.3e-83, Sum P(4) = 6.3e-83
Identities = 11/55 (20%), Positives = 21/55 (38%)
Query: 544 LFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCLPSI 598
L ++ K +L E + + + E P+ D + + E CLP +
Sbjct: 1040 LLCNYRTYLRKLAALILKEVKNLMRALGIPETEPPLIDVMDRCVPGIIEKCLPQL 1094
Score = 38 (18.4 bits), Expect = 1.1e-13, Sum P(4) = 1.1e-13
Identities = 10/42 (23%), Positives = 20/42 (47%)
Query: 803 ELKELRFKEPNTHTTQSIISLLMGMKFFRVKMVPIEEFEASF 844
+++ L +P+ HT++ + L +K K V I + F
Sbjct: 3107 QVQALLVNQPSAHTSELLQQLYRLIKELTFKTVNISKEAKKF 3148
Score = 37 (18.1 bits), Expect = 9.9e-15, Sum P(3) = 9.9e-15
Identities = 7/18 (38%), Positives = 12/18 (66%)
Query: 773 NIHTVADLYAEVLGVLAQ 790
++H ++DLYA V L +
Sbjct: 3297 DMHDISDLYALVRDALVR 3314
>UNIPROTKB|O94915 [details] [associations]
symbol:FRYL "Protein furry homolog-like" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR016024 SUPFAM:SSF48371 Gene3D:1.25.10.10
InterPro:IPR011989 GO:GO:0006355 GO:GO:0006351 EMBL:AC068037
EMBL:AC096952 EMBL:BC021803 EMBL:U80082 EMBL:AB020633 EMBL:AL137546
IPI:IPI00159652 IPI:IPI00739940 PIR:T46389 RefSeq:NP_055845.1
UniGene:Hs.595553 ProteinModelPortal:O94915 IntAct:O94915
MINT:MINT-1632000 STRING:O94915 PhosphoSite:O94915 PaxDb:O94915
PRIDE:O94915 Ensembl:ENST00000264319 Ensembl:ENST00000358350
Ensembl:ENST00000503238 Ensembl:ENST00000507873 GeneID:285527
KEGG:hsa:285527 UCSC:uc003gyf.1 UCSC:uc003gyg.1 CTD:285527
GeneCards:GC04M048499 H-InvDB:HIX0004200 HGNC:HGNC:29127
HPA:HPA031106 HPA:HPA031107 neXtProt:NX_O94915 PharmGKB:PA134967984
eggNOG:NOG282247 HOGENOM:HOG000112653 HOVERGEN:HBG081541
OMA:GLDNETH ChiTaRS:FRYL GenomeRNAi:285527 NextBio:95583
ArrayExpress:O94915 Bgee:O94915 CleanEx:HS_FRYL
Genevestigator:O94915 InterPro:IPR025614 InterPro:IPR025481
Pfam:PF14225 Pfam:PF14222 Uniprot:O94915
Length = 3013
Score = 642 (231.1 bits), Expect = 3.0e-192, Sum P(6) = 3.0e-192
Identities = 123/185 (66%), Positives = 154/185 (83%)
Query: 709 KEAETILQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQND 768
+E + +L ERRDLAV+F+FCL+L+EVLKQ+P HP D LV + +AFKHFK++EG
Sbjct: 110 RERDYLL-ERRDLAVDFIFCLVLVEVLKQIPVHPVPDPLVHEVLNLAFKHFKHKEGYSGT 168
Query: 769 PNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMK 828
N N+H +ADLYAEV+GVLAQS+FQ+VRK+F++ELKELR KE + H QS+ISL+MGMK
Sbjct: 169 -NTGNVHIIADLYAEVIGVLAQSKFQAVRKKFVTELKELRQKEQSPHVVQSVISLIMGMK 227
Query: 829 FFRVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFI 888
FFRVKM P+E+FEASFQFMQECAQYF +VKDKD+KHALAGLFVEIL+PVAA VKNEV +
Sbjct: 228 FFRVKMYPVEDFEASFQFMQECAQYFLEVKDKDIKHALAGLFVEILIPVAAAVKNEVN-V 286
Query: 889 PIVSS 893
P + +
Sbjct: 287 PCLKN 291
Score = 557 (201.1 bits), Expect = 3.0e-192, Sum P(6) = 3.0e-192
Identities = 108/136 (79%), Positives = 123/136 (90%)
Query: 1141 ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQ 1200
ESLYRLLWVY+IRIKCESN+ TQSRL SIV++LFPKGS++VVPRDTPLNIFVKIIQFIAQ
Sbjct: 357 ESLYRLLWVYVIRIKCESNTVTQSRLMSIVSALFPKGSRSVVPRDTPLNIFVKIIQFIAQ 416
Query: 1201 ERLDFAMREIVFDLLSVGRPIKLI-LTPERMSIGLRAFLVVADSLQQKEGEPPMPRTSGV 1259
ERLDFAM+EI+FDLLSVG+ K + PERM+IGLR FLV+ADSLQQK+GEPPMP T +
Sbjct: 417 ERLDFAMKEIIFDLLSVGKSTKTFTINPERMNIGLRVFLVIADSLQQKDGEPPMPTTGVI 476
Query: 1260 LPSGNTLRVKKTYLNK 1275
LPSGNTLRVKK +LNK
Sbjct: 477 LPSGNTLRVKKIFLNK 492
Score = 470 (170.5 bits), Expect = 3.0e-192, Sum P(6) = 3.0e-192
Identities = 122/366 (33%), Positives = 182/366 (49%)
Query: 1700 DSFLSLWRYLAIFSARXXXXXXXXXXRCASPDLSLSWSPENVGGER-GGAGVENKXXXXX 1758
DS++ LWR I S S PE + G +++K
Sbjct: 858 DSYIGLWRNYLILCCSAATSSSSTSA--GSVRCS---PPETLASTPDSGYSIDSKIIGIP 912
Query: 1759 XXXXXXXGLYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTE 1818
L+K +VP++R ++ ++ +++V LG N A ++L+EEL I+EA++R+ E
Sbjct: 913 SPSS----LFKHIVPMMRSESMEITESLVLGLGRTNPGAFRELIEELHPIIKEALERRPE 968
Query: 1819 NMXXXXXXXXXXXXXXXVFELIAE-----HGTFGACSPTMPGLLSPLAEYVDGARLCLEL 1873
NM +FEL+A+ H G L + L EYVD R LE
Sbjct: 969 NMKRRRRRDILRVQLVRIFELLADAGVISHSASGGLDNETHFLNNTLLEYVDLTRQLLEA 1028
Query: 1874 EADKQ--ILREIKAHFCNFVCKMIHSFPLESRQTLL-KRDLRRNLFSLFTSWAGQYGRNL 1930
E +K L++I+ HF V +I + P+ R+++ ++ LR +LF LF+ WAG +
Sbjct: 1029 ENEKDSDTLKDIRCHFSALVANIIQNVPVHQRRSIFPQQSLRHSLFMLFSHWAGPF---- 1084
Query: 1931 NITQSYSVSMPNPPASNPGPEALKTSEEELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVL 1990
S+ P ++ + Q +L AMSAVL CGPV D + L+ DG L
Sbjct: 1085 --------SIMFTPLDRYSDRNMQINRH--QYCALKAMSAVLCCGPVAD-NVGLSSDGYL 1133
Query: 1991 YPWLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALA 2050
Y WLD +L S ++K +Q+GC+ V LLLE NPD L+ W VDRCYT S +VA GCF A+A
Sbjct: 1134 YKWLDNILDSLDKKVHQLGCEAVTLLLELNPDQSNLMYWAVDRCYTGSGRVAAGCFKAIA 1193
Query: 2051 TLFSAR 2056
+F R
Sbjct: 1194 NVFQNR 1199
Score = 324 (119.1 bits), Expect = 7.7e-168, Sum P(6) = 7.7e-168
Identities = 62/103 (60%), Positives = 82/103 (79%)
Query: 936 PTSRSDVQCINHCTTEEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRL 995
P + VQ N +EP++MITGERKP+IDLFRTC+AA+PRLIPD M+ +L++LL+RL
Sbjct: 529 PMCMTSVQMSN----KEPEDMITGERKPKIDLFRTCIAAIPRLIPDGMSRTDLIELLARL 584
Query: 996 TLHMDEELRALAYQSLQTLVIDFPDWRHDVLAVF-YFGTHDMT 1037
T+HMDEELRALA+ +LQ L++DFPDWR DVL+ F YF ++T
Sbjct: 585 TIHMDEELRALAFNTLQALMLDFPDWREDVLSGFVYFIVREVT 627
Score = 270 (100.1 bits), Expect = 3.0e-192, Sum P(6) = 3.0e-192
Identities = 51/77 (66%), Positives = 63/77 (81%)
Query: 533 NVRPGEYVMRSLFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIAFGSVAE 592
+V+PGEYV++SLFA+F QAEKK++ V+AEP EK LS+ LQRGED FDQL+ + SVAE
Sbjct: 9 DVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKLLSRSLQRGEDLQFDQLISSMSSVAE 68
Query: 593 HCLPSILRALFAWYERQ 609
HCLPS+LR LF WY RQ
Sbjct: 69 HCLPSLLRTLFDWYRRQ 85
Score = 147 (56.8 bits), Expect = 3.0e-192, Sum P(6) = 3.0e-192
Identities = 56/183 (30%), Positives = 83/183 (45%)
Query: 1539 DQNVIDVIDKACPDILDQCMSQLTCADKTAALSA-SCIDLQWIADRSASIWTAGIHE-DS 1596
D+ IDV+D+ P IL+ + LT AD+T L S IDLQ +A+ ++S + H+ D
Sbjct: 727 DELAIDVMDRLSPSILESFI-HLTGADQTTLLYCPSSIDLQTLAEWNSSPIS---HQFDV 782
Query: 1597 NRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTI-- 1654
+ + DPW L FL++ + +C +AV+ AW Y+RL L P +
Sbjct: 783 ISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHCSTAVSYAWMFAYTRLQLLSPQVDI 842
Query: 1655 -----GKKT-------SYCALTYYFLLSSLTDPTPVSDNRASLLRSSAPPRKPVSERDSF 1702
KK SY L +L+ + T S A +R S PP S DS
Sbjct: 843 NSPINAKKVNTTTSSDSYIGLWRNYLILCCSAATSSSSTSAGSVRCS-PPETLASTPDSG 901
Query: 1703 LSL 1705
S+
Sbjct: 902 YSI 904
Score = 121 (47.7 bits), Expect = 1.2e-176, Sum P(6) = 1.2e-176
Identities = 22/48 (45%), Positives = 36/48 (75%)
Query: 178 NVRPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISKYVFHTRTMSF 225
+V+PGEYV++SLFA+F QAEKK++ V+AEP +++S+ + + F
Sbjct: 9 DVKPGEYVIKSLFAEFAVQAEKKIEVVMAEPLEKLLSRSLQRGEDLQF 56
Score = 117 (46.2 bits), Expect = 3.0e-192, Sum P(6) = 3.0e-192
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 1404 DNAHLVFGHAHSNSNLSNLTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKV 1463
D H V A L S VFH VEGFALV+LC+ R RRL+V +LRE++ L +
Sbjct: 660 DTQHGVANGASHPPPLERSPYSNVFHVVEGFALVILCSSRPATRRLAVSVLREIRALFAL 719
Query: 1464 LGLGLEPPTSRSDVQCIDHCTTDVMQCKTH 1493
L + DV +D + +++ H
Sbjct: 720 LEIPKGDDELAIDV--MDRLSPSILESFIH 747
Score = 92 (37.4 bits), Expect = 2.3e-111, Sum P(6) = 2.3e-111
Identities = 46/181 (25%), Positives = 79/181 (43%)
Query: 1037 TIDLQWIADRSASIWTAGIHE-DSNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVLTYC 1095
+IDLQ +A+ ++S + H+ D + + DPW L FL++ + +C
Sbjct: 762 SIDLQTLAEWNSSPIS---HQFDVISPSHIWIFAHVTQGQDPWIISLSSFLKQENLPKHC 818
Query: 1096 PSAVAQAWPIVYSRLHTLFPTI---VPFLTTHSFTLISANSFICFPLAESLYR--LLWVY 1150
+AV+ AW Y+RL L P + P T S++S+I L+R L+
Sbjct: 819 STAVSYAWMFAYTRLQLLSPQVDINSPINAKKVNTTTSSDSYI------GLWRNYLILCC 872
Query: 1151 MIRIKCESNSATQSR------LQSIVNSLFPKGSKAV-VPRDTPLNIFVKIIQFIAQERL 1203
S SA R L S +S + SK + +P +P ++F I+ + E +
Sbjct: 873 SAATSSSSTSAGSVRCSPPETLASTPDSGYSIDSKIIGIP--SPSSLFKHIVPMMRSESM 930
Query: 1204 D 1204
+
Sbjct: 931 E 931
Score = 54 (24.1 bits), Expect = 1.1e-148, Sum P(6) = 1.1e-148
Identities = 26/96 (27%), Positives = 43/96 (44%)
Query: 1934 QSYSVSMPNPPASNPGPEAL-KTSEEELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVLYP 1992
Q Y S P + E ++SEEE LT+ S +L+ + + + A D +
Sbjct: 2467 QEYQCSSSTPSLNLTNQEDTDESSEEEAALTA----SQILSRTQMLNSDS--ATDETIPD 2520
Query: 1993 WLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLD 2028
D+LL SE+ T I + V+ + + P + LD
Sbjct: 2521 HPDLLL-QSEDSTGSITTEEVLQIRDETPTLEASLD 2555
Score = 47 (21.6 bits), Expect = 3.0e-138, Sum P(6) = 3.0e-138
Identities = 15/56 (26%), Positives = 24/56 (42%)
Query: 1660 YCALTYYFLLSSLTDPTPVSDNRASLLRSSAPPRKPVSER--DSFLSLWRYLAIFS 1713
Y +T + + S+T T S N P KP+ E +S++ L Y + S
Sbjct: 1464 YYRITSSYKIPSVTSGTTSSSNTMVAPTDGNPDNKPIKENIEESYVHLDIYSGLNS 1519
Score = 39 (18.8 bits), Expect = 8.9e-78, Sum P(4) = 8.9e-78
Identities = 22/82 (26%), Positives = 38/82 (46%)
Query: 977 RLIPDAMTGGELVDLLSRLTLHMD---EELRALAYQSLQTL--VIDF--PDWRH-DVL-A 1027
R + +T L D+LSRL + E+ + + L TL ID +H D+L A
Sbjct: 1834 RALKQPLTATTLSDVLSRLVETVGDPGEDAQGFVIELLLTLESAIDTLAETMKHYDLLSA 1893
Query: 1028 VFYFGTHDMTIDLQWIADRSAS 1049
+ HD + ++ A+R ++
Sbjct: 1894 LSQTSYHDPIMGNKYAANRKST 1915
Score = 37 (18.1 bits), Expect = 6.4e-147, Sum P(6) = 6.4e-147
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1933 TQSYSVSMPNPPASNPGPEALKTSEEE 1959
T S S +M P NP + +K + EE
Sbjct: 1480 TTSSSNTMVAPTDGNPDNKPIKENIEE 1506
Score = 37 (18.1 bits), Expect = 6.4e-104, Sum P(6) = 6.4e-104
Identities = 12/57 (21%), Positives = 26/57 (45%)
Query: 776 TVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRV 832
T +++ +++ +AQ R K + +L + K T T + +G++ F V
Sbjct: 402 TPLNIFVKIIQFIAQERLDFAMKEIIFDLLSVG-KSTKTFTINPE-RMNIGLRVFLV 456
>MGI|MGI:2443895 [details] [associations]
symbol:Fry "furry homolog (Drosophila)" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0005575
"cellular_component" evidence=ND] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] MGI:MGI:2443895 GO:GO:0005737
GO:GO:0005815 GO:GO:0000922 EMBL:AC154885 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222 CTD:10129
GeneTree:ENSGT00610000086058 OMA:RLQSVMP EMBL:AK079097
EMBL:AK086708 EMBL:AC084217 EMBL:AK220506 EMBL:BC042756
EMBL:BC096532 IPI:IPI00848482 RefSeq:NP_766475.2 UniGene:Mm.216590
UniGene:Mm.412151 UniGene:Mm.454348 PRIDE:E9Q8I9
Ensembl:ENSMUST00000087204 GeneID:320365 KEGG:mmu:320365
NextBio:396586 Bgee:E9Q8I9 Uniprot:E9Q8I9
Length = 3020
Score = 622 (224.0 bits), Expect = 4.6e-187, Sum P(5) = 4.6e-187
Identities = 120/175 (68%), Positives = 146/175 (83%)
Query: 715 LQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDPNATNI 774
L ERRDLA++F+F L+LIEVLKQ+P HP D+L+ I +AFKHFKY+EG PN N+
Sbjct: 163 LMERRDLAIDFIFSLVLIEVLKQIPLHPVIDSLIHDIINLAFKHFKYKEGYLG-PNTGNM 221
Query: 775 HTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRVKM 834
H VADLYAEV+GVLAQ++F +V+K+FM+ELKELR KE + + QSIISL+MGMKFFR+KM
Sbjct: 222 HIVADLYAEVIGVLAQAKFPAVKKKFMAELKELRHKEQSPYVVQSIISLIMGMKFFRIKM 281
Query: 835 VPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFIP 889
P+E+FEAS QFMQECA YF +VKDKD+KHALAGLFVEILVPVAA VKNEV +P
Sbjct: 282 YPVEDFEASLQFMQECAHYFLEVKDKDIKHALAGLFVEILVPVAAAVKNEVN-VP 335
Score = 559 (201.8 bits), Expect = 4.6e-187, Sum P(5) = 4.6e-187
Identities = 110/136 (80%), Positives = 121/136 (88%)
Query: 1141 ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQ 1200
ESLYRLLWVYMIRIKCESN+ATQSRL +I +LFPKGS+ VVPRD PLNIFVKIIQFIAQ
Sbjct: 405 ESLYRLLWVYMIRIKCESNTATQSRLITITTTLFPKGSRGVVPRDMPLNIFVKIIQFIAQ 464
Query: 1201 ERLDFAMREIVFDLLSVGRPIKLI-LTPERMSIGLRAFLVVADSLQQKEGEPPMPRTSGV 1259
ERLDFAM+EI+FD L VG+P K L PERM+IGLRAFLV+ADSLQQK+GEPPMP T V
Sbjct: 465 ERLDFAMKEIIFDFLCVGKPAKAFSLNPERMNIGLRAFLVIADSLQQKDGEPPMPVTGAV 524
Query: 1260 LPSGNTLRVKKTYLNK 1275
LPSGNTLRVKKTYL+K
Sbjct: 525 LPSGNTLRVKKTYLSK 540
Score = 493 (178.6 bits), Expect = 4.6e-187, Sum P(5) = 4.6e-187
Identities = 135/407 (33%), Positives = 209/407 (51%)
Query: 1662 ALTYY--FLLSSLTDPTPVSDNRASLLRSSAPPRKPVSERDSFLSLWR-YLAI-FSARXX 1717
AL+Y + + L P+ D + + +A S D++++LWR YL + F
Sbjct: 872 ALSYAWPYAFTRLQSVMPLVDPNSPV---NAKKTSTASSGDNYVTLWRNYLILCFGVAKP 928
Query: 1718 XXXXXXXXRCASPDLSLSWSPENVGGERGGAGVENKXXXXXXXXXXXXGLYKLLVPLLRC 1777
R ++P++ ++ +P+ G +NK L K LVPL+R
Sbjct: 929 SIMSPGHLRASTPEI-MATTPD------GTVSYDNKAIGTPSVGV----LLKQLVPLMRL 977
Query: 1778 DTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTENMXXXXXXXXXXXXXXXVF 1837
++ ++ +++V G NS ++L+EEL ++EA++R+ EN +F
Sbjct: 978 ESIEITESLVLGFGRTNSLVFRELVEELHPLMKEALERRPENKKRRERRDLLRLQLLRIF 1037
Query: 1838 ELIAEHG-----TFGACSPTMPGLLSPLAEYVDGARLCLELEADKQ--ILREIKAHFCNF 1890
EL+A+ G T GA L + EYVD R+ LE E DK+ IL++I+AHF
Sbjct: 1038 ELLADAGVISDSTNGALERDTLALGALFLEYVDLTRMLLEAENDKEVEILKDIRAHFSAM 1097
Query: 1891 VCKMIHSFPLESRQTLL-KRDLRRNLFSLFTSWAGQYGRNLNITQSYSVSMPNPPASNPG 1949
V +I P+ R+ L ++ LR +LF LF+ WAG + ++ T P S+
Sbjct: 1098 VANLIQCVPVHHRRFLFPQQSLRHHLFILFSQWAGPF--SIMFT-------PLDRYSDRN 1148
Query: 1950 PEALKTSEEELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVLYPWLDMLLASSEEKTYQIG 2009
+ + Q +L AMSAVL CGPVFD + L+ DG LY WLD +LA + + +Q+G
Sbjct: 1149 HQITR-----YQYCALKAMSAVLCCGPVFD-NVGLSPDGYLYKWLDNILACQDLRVHQLG 1202
Query: 2010 CQTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALATLFSAR 2056
C+ V+LLLE NPD L +W +DRCYT S Q+A GCF A+AT+ R
Sbjct: 1203 CEVVMLLLELNPDQINLFNWAIDRCYTGSYQLASGCFKAIATVCGNR 1249
Score = 293 (108.2 bits), Expect = 3.9e-159, Sum P(5) = 3.9e-159
Identities = 56/90 (62%), Positives = 74/90 (82%)
Query: 940 SDVQCINHCTTEEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHM 999
++VQ +N +EP++MITGERKP+IDLFRTCVAA+PRL+PD M+ EL+DLL+RL++HM
Sbjct: 581 TNVQMLN----KEPEDMITGERKPKIDLFRTCVAAIPRLLPDGMSKLELIDLLARLSIHM 636
Query: 1000 DEELRALAYQSLQTLVIDFPDWRHDVLAVF 1029
D+ELR +A SLQ L++DF DWR DVL F
Sbjct: 637 DDELRHIAQNSLQGLLVDFSDWREDVLFGF 666
Score = 265 (98.3 bits), Expect = 4.6e-187, Sum P(5) = 4.6e-187
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 535 RPGEYVMRSLFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHC 594
+PGEYV++SLF +FT QAE+K+ ++AEP EKPL+K LQRGEDP FDQ++ + S++E+C
Sbjct: 61 KPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDPQFDQVISSMSSLSEYC 120
Query: 595 LPSILRALFAWYERQ 609
LPSILR LF WY+RQ
Sbjct: 121 LPSILRTLFDWYKRQ 135
Score = 163 (62.4 bits), Expect = 4.6e-187, Sum P(5) = 4.6e-187
Identities = 58/233 (24%), Positives = 103/233 (44%)
Query: 1425 SQVFHQVEGFALVMLCNVRLTPRRLSVHIL-REVKMLNKVLGLGLEPPTSRSDVQCI--D 1481
+ + H + +L +L + LT +L + R + NK+ L P S +Q
Sbjct: 675 NDMHHTLLDSSLKLLLQL-LTQWKLVIQTQGRAYEQANKIRNSELIPNGSSHRMQSERGP 733
Query: 1482 HCTTDVMQCKTHTSETQCSYPTRGENVEQSSRLCTQELRNWIRPSEQPPWPSCSEHADQN 1541
HC+ + + CS+ + S L +E+R QP E D+
Sbjct: 734 HCSV-LHAVEGFALVLLCSFQVATRKL---SVLILKEIRALFLALGQP------EDDDRP 783
Query: 1542 VIDVIDKACPDILDQCMSQLTCADKTAALSASCIDLQWIADRSASIWTAGIHEDSNRNGS 1601
+IDV+D+ IL+ + + +D +DLQW+ + +A + + H D
Sbjct: 784 MIDVMDQLSSSILESFI-HVAVSDSATLPPTHNVDLQWLVEWNAVLVNS--HYDVKSPSH 840
Query: 1602 VLNLSPSCSAPDPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTI 1654
V + S DPW CLF FL++ + +CP+A++ AWP ++RL ++ P +
Sbjct: 841 VWIFAQSVK--DPWVLCLFSFLRQENLPKHCPTALSYAWPYAFTRLQSVMPLV 891
Score = 142 (55.0 bits), Expect = 6.2e-157, Sum P(5) = 6.2e-157
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 1033 THDMTIDLQWIADRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVL 1092
TH+ +DLQW+ + +A + + H D V + S DPW CLF FL++ +
Sbjct: 813 THN--VDLQWLVEWNAVLVNS--HYDVKSPSHVWIFAQSVK--DPWVLCLFSFLRQENLP 866
Query: 1093 TYCPSAVAQAWPIVYSRLHTLFPTIVP 1119
+CP+A++ AWP ++RL ++ P + P
Sbjct: 867 KHCPTALSYAWPYAFTRLQSVMPLVDP 893
Score = 102 (41.0 bits), Expect = 6.0e-170, Sum P(5) = 6.0e-170
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 180 RPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISK 215
+PGEYV++SLF +FT QAE+K+ ++AEP + ++K
Sbjct: 61 KPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTK 96
Score = 50 (22.7 bits), Expect = 3.9e-129, Sum P(4) = 3.9e-129
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 1415 SNSNLS-NLTR-SQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLG-LGLEPP 1471
SNS+L +LT S V H A + V L L +++LN++L + LE
Sbjct: 2028 SNSSLKESLTDPSHVSHPTNLLATIFWVTVALMESDFEFEYLMALRLLNRLLAHMPLEKA 2087
Query: 1472 TSRSDVQ 1478
+R ++
Sbjct: 2088 ENREKLE 2094
Score = 44 (20.5 bits), Expect = 1.1e-75, Sum P(3) = 1.1e-75
Identities = 46/207 (22%), Positives = 79/207 (38%)
Query: 991 LLSRLTLHMDEELRALAYQSLQTLVI-----DFPDWRHDVLAVFY-FGTHDMTIDLQWIA 1044
LL+RL HM E +A + L+ L DFP + +L F T D+T+ L +
Sbjct: 2074 LLNRLLAHMPLE-KAENREKLEKLQAQLKWADFPGLQQLLLKGFTSLTTTDLTLQLFSLL 2132
Query: 1045 DRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVLTYCPSAVAQAWP 1104
S+ + + S G LN+ C P L Q + +C +
Sbjct: 2133 ---TSVSKVPMVDSSQAIGFPLNVL--CLLPQ-----LIQHFENPN--QFCKDIAERIAQ 2180
Query: 1105 IVYSRLHTLFPTIVPFLT---THSFTLISAN--SFICFPLAESLYRL---LWVYMIRIKC 1156
+ + + +T THS+T A + +C L E+ + + Y+ +
Sbjct: 2181 VCLEEKNPKLSNLAHVMTLYKTHSYTRDCATWVNVVCRYLHEAYADITLNMVTYLAELLE 2240
Query: 1157 ESNSATQSRLQSIVNSLFPKGSKAVVP 1183
+ + Q L ++ SL +VVP
Sbjct: 2241 KGLPSMQQPLLQVIYSLLSYMDLSVVP 2267
Score = 40 (19.1 bits), Expect = 1.5e-139, Sum P(5) = 1.5e-139
Identities = 15/55 (27%), Positives = 25/55 (45%)
Query: 1867 ARLCLELEADKQILREIKAHFCNFVCKMIHSFPLESRQTLLKRDLRRNLFSLFTS 1921
A + LE +++ L +++A + L+ +L DL LFSL TS
Sbjct: 2080 AHMPLEKAENREKLEKLQAQLKWADFPGLQQLLLKGFTSLTTTDLTLQLFSLLTS 2134
Score = 37 (18.1 bits), Expect = 1.1e-13, Sum P(3) = 1.1e-13
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 732 IEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDP 769
IE+ + L G N + + E V H +E ++ P
Sbjct: 980 IEITESLVLGFGRTNSLVFRELVEELHPLMKEALERRP 1017
>UNIPROTKB|Q5TBA9 [details] [associations]
symbol:FRY "Protein furry homolog" species:9606 "Homo
sapiens" [GO:0000922 "spindle pole" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005815 "microtubule organizing
center" evidence=IEA] GO:GO:0005737 GO:GO:0005815 GO:GO:0000922
EMBL:AL445212 eggNOG:NOG282247 HOGENOM:HOG000112653
HOVERGEN:HBG081541 InterPro:IPR025614 InterPro:IPR025481
Pfam:PF14225 Pfam:PF14222 CTD:10129 ChiTaRS:FRY EMBL:AL049784
EMBL:AL137143 EMBL:AL138692 IPI:IPI00746419 RefSeq:NP_075463.2
UniGene:Hs.507669 UniGene:Hs.718654 ProteinModelPortal:Q5TBA9
IntAct:Q5TBA9 MINT:MINT-1746188 STRING:Q5TBA9 PhosphoSite:Q5TBA9
DMDM:74745928 PaxDb:Q5TBA9 PRIDE:Q5TBA9 Ensembl:ENST00000380250
GeneID:10129 KEGG:hsa:10129 UCSC:uc001utx.3 GeneCards:GC13P032605
HGNC:HGNC:20367 HPA:HPA041635 MIM:614818 neXtProt:NX_Q5TBA9
PharmGKB:PA134927490 OMA:RLQSVMP OrthoDB:EOG4TF0JB GenomeRNAi:10129
NextBio:38315 ArrayExpress:Q5TBA9 Bgee:Q5TBA9 CleanEx:HS_FRY
Genevestigator:Q5TBA9 Uniprot:Q5TBA9
Length = 3013
Score = 626 (225.4 bits), Expect = 7.9e-186, Sum P(5) = 7.9e-186
Identities = 120/175 (68%), Positives = 146/175 (83%)
Query: 715 LQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDPNATNI 774
L ERRDLA++F+F L+LIEVLKQ+P HP D+L+ + +AFKHFKY+EG PN N+
Sbjct: 163 LMERRDLAIDFIFSLVLIEVLKQIPLHPVIDSLIHDVINLAFKHFKYKEGYLG-PNTGNM 221
Query: 775 HTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMKFFRVKM 834
H VADLYAEV+GVLAQ++F +V+K+FM+ELKELR KE N + QSIISL+MGMKFFR+KM
Sbjct: 222 HIVADLYAEVIGVLAQAKFPAVKKKFMAELKELRHKEQNPYVVQSIISLIMGMKFFRIKM 281
Query: 835 VPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFIP 889
P+E+FEAS QFMQECA YF +VKDKD+KHALAGLFVEILVPVAA VKNEV +P
Sbjct: 282 YPVEDFEASLQFMQECAHYFLEVKDKDIKHALAGLFVEILVPVAAAVKNEVN-VP 335
Score = 562 (202.9 bits), Expect = 7.9e-186, Sum P(5) = 7.9e-186
Identities = 110/136 (80%), Positives = 122/136 (89%)
Query: 1141 ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQ 1200
ESLYRLLWVYMIRIKCESN+ATQSRL +I+ +LFPKGS+ VVPRD PLNIFVKIIQFIAQ
Sbjct: 405 ESLYRLLWVYMIRIKCESNTATQSRLITIITTLFPKGSRGVVPRDMPLNIFVKIIQFIAQ 464
Query: 1201 ERLDFAMREIVFDLLSVGRPIKLI-LTPERMSIGLRAFLVVADSLQQKEGEPPMPRTSGV 1259
ERLDFAM+EI+FD L VG+P K L PERM+IGLRAFLV+ADSLQQK+GEPPMP T V
Sbjct: 465 ERLDFAMKEIIFDFLCVGKPAKAFSLNPERMNIGLRAFLVIADSLQQKDGEPPMPVTGAV 524
Query: 1260 LPSGNTLRVKKTYLNK 1275
LPSGNTLRVKKTYL+K
Sbjct: 525 LPSGNTLRVKKTYLSK 540
Score = 476 (172.6 bits), Expect = 7.9e-186, Sum P(5) = 7.9e-186
Identities = 114/298 (38%), Positives = 168/298 (56%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTENMXXXXXX 1826
L K LVPL+R ++ ++ +++V G NS ++L+EEL ++EA++R+ EN
Sbjct: 967 LLKQLVPLMRLESIEITESLVLGFGRTNSLVFRELVEELHPLMKEALERRPENKKRRERR 1026
Query: 1827 XXXXXXXXXVFELIAEHG-----TFGACSPTMPGLLSPLAEYVDGARLCLELEADKQ--I 1879
+FEL+A+ G T GA L + EYVD R+ LE E DK+ I
Sbjct: 1027 DLLRLQLLRIFELLADAGVISDSTNGALERDTLALGALFLEYVDLTRMLLEAENDKEVEI 1086
Query: 1880 LREIKAHFCNFVCKMIHSFPLESRQTLL-KRDLRRNLFSLFTSWAGQYGRNLNITQSYSV 1938
L++I+AHF V +I P+ R+ L ++ LR +LF LF+ WAG + ++ T
Sbjct: 1087 LKDIRAHFSAMVANLIQCVPVHHRRFLFPQQSLRHHLFILFSQWAGPF--SIMFT----- 1139
Query: 1939 SMPNPPASNPGPEALKTSEEELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVLYPWLDMLL 1998
P S+ + + Q +L AMSAVL CGPVFD + L+ DG LY WLD +L
Sbjct: 1140 --PLDRYSDRNHQITR-----YQYCALKAMSAVLCCGPVFD-NVGLSPDGYLYKWLDNIL 1191
Query: 1999 ASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALATLFSAR 2056
A + + +Q+GC+ V+LLLE NPD L +W +DRCYT S Q+A GCF A+AT+ +R
Sbjct: 1192 ACQDLRVHQLGCEVVVLLLELNPDQINLFNWAIDRCYTGSYQLASGCFKAIATVCGSR 1249
Score = 293 (108.2 bits), Expect = 1.4e-157, Sum P(5) = 1.4e-157
Identities = 56/90 (62%), Positives = 74/90 (82%)
Query: 940 SDVQCINHCTTEEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHM 999
++VQ +N +EP++MITGERKP+IDLFRTCVAA+PRL+PD M+ EL+DLL+RL++HM
Sbjct: 581 TNVQMLN----KEPEDMITGERKPKIDLFRTCVAAIPRLLPDGMSKLELIDLLARLSIHM 636
Query: 1000 DEELRALAYQSLQTLVIDFPDWRHDVLAVF 1029
D+ELR +A SLQ L++DF DWR DVL F
Sbjct: 637 DDELRHIAQNSLQGLLVDFSDWREDVLFGF 666
Score = 265 (98.3 bits), Expect = 7.9e-186, Sum P(5) = 7.9e-186
Identities = 47/75 (62%), Positives = 63/75 (84%)
Query: 535 RPGEYVMRSLFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHC 594
+PGEYV++SLF +FT QAE+K+ ++AEP EKPL+K LQRGEDP FDQ++ + S++E+C
Sbjct: 61 KPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTKSLQRGEDPQFDQVISSMSSLSEYC 120
Query: 595 LPSILRALFAWYERQ 609
LPSILR LF WY+RQ
Sbjct: 121 LPSILRTLFDWYKRQ 135
Score = 161 (61.7 bits), Expect = 7.9e-186, Sum P(5) = 7.9e-186
Identities = 36/119 (30%), Positives = 63/119 (52%)
Query: 1536 EHADQNVIDVIDKACPDILDQCMSQLTCADKTAALSASCIDLQWIADRSASIWTAGIHED 1595
E D+ +IDV+D+ IL+ + T L+ + +DLQW+ + +A + + H D
Sbjct: 778 EDDDRPMIDVMDQLSSSILESFIHVAVSDSATLPLTHN-VDLQWLVEWNAVLVNS--HYD 834
Query: 1596 SNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTI 1654
V + S DPW CLF FL++ + +CP+A++ AWP ++RL ++ P +
Sbjct: 835 VKSPSHVWIFAQSVK--DPWVLCLFSFLRQENLPKHCPTALSYAWPYAFTRLQSVMPLV 891
Score = 142 (55.0 bits), Expect = 1.4e-155, Sum P(5) = 1.4e-155
Identities = 29/87 (33%), Positives = 49/87 (56%)
Query: 1033 THDMTIDLQWIADRSASIWTAGIHEDSNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVL 1092
TH+ +DLQW+ + +A + + H D V + S DPW CLF FL++ +
Sbjct: 813 THN--VDLQWLVEWNAVLVNS--HYDVKSPSHVWIFAQSVK--DPWVLCLFSFLRQENLP 866
Query: 1093 TYCPSAVAQAWPIVYSRLHTLFPTIVP 1119
+CP+A++ AWP ++RL ++ P + P
Sbjct: 867 KHCPTALSYAWPYAFTRLQSVMPLVDP 893
Score = 116 (45.9 bits), Expect = 4.2e-181, Sum P(5) = 4.2e-181
Identities = 26/83 (31%), Positives = 46/83 (55%)
Query: 1427 VFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGLGLEPPTSRSDVQCIDHCTTD 1486
V H VEGFALV+LC+ ++ R+LSV IL+E++ L + LG R + +D ++
Sbjct: 737 VLHAVEGFALVLLCSFQVATRKLSVLILKEIRAL--FIALGQPEDDDRPMIDVMDQLSSS 794
Query: 1487 VMQCKTHTSETQCSYPTRGENVE 1509
+++ H + + + NV+
Sbjct: 795 ILESFIHVAVSDSATLPLTHNVD 817
Score = 102 (41.0 bits), Expect = 1.0e-168, Sum P(5) = 1.0e-168
Identities = 18/36 (50%), Positives = 29/36 (80%)
Query: 180 RPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISK 215
+PGEYV++SLF +FT QAE+K+ ++AEP + ++K
Sbjct: 61 KPGEYVLKSLFVNFTTQAERKIRIIMAEPLEKPLTK 96
Score = 41 (19.5 bits), Expect = 8.7e-76, Sum P(3) = 8.7e-76
Identities = 15/43 (34%), Positives = 22/43 (51%)
Query: 913 DPLRASSNDDIHSECKQGLGLEPPTSRS------DVQCINHCT 949
DP R+++ D I + +QGL + +S S D INH T
Sbjct: 1996 DPPRSATLDRIQACTQQGLSSKTRSSSSLKDSLTDPSHINHPT 2038
Score = 37 (18.1 bits), Expect = 8.6e-14, Sum P(3) = 8.6e-14
Identities = 10/38 (26%), Positives = 17/38 (44%)
Query: 732 IEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDP 769
IE+ + L G N + + E V H +E ++ P
Sbjct: 980 IEITESLVLGFGRTNSLVFRELVEELHPLMKEALERRP 1017
>WB|WBGene00004728 [details] [associations]
symbol:sax-2 species:6239 "Caenorhabditis elegans"
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0031175 "neuron projection development"
evidence=IMP] InterPro:IPR016024 GO:GO:0009792 SUPFAM:SSF48371
GO:GO:0031175 GO:GO:0043652 eggNOG:NOG282247 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222
GeneTree:ENSGT00610000086058 EMBL:FO081200 GeneID:175697
KEGG:cel:CELE_F21H11.2 CTD:175697 RefSeq:NP_741131.2
ProteinModelPortal:Q5DX48 IntAct:Q5DX48 PaxDb:Q5DX48 PRIDE:Q5DX48
EnsemblMetazoa:F21H11.2a UCSC:F21H11.2a WormBase:F21H11.2a
InParanoid:Q5DX48 OMA:ESSIQAM NextBio:889256 ArrayExpress:Q5DX48
Uniprot:Q5DX48
Length = 2886
Score = 399 (145.5 bits), Expect = 1.0e-112, Sum P(6) = 1.0e-112
Identities = 86/178 (48%), Positives = 116/178 (65%)
Query: 1108 SRLHTLFPTIVPFLTTHSFTLISANSFICFPLAESLYRLLWVYMIRIKCESNSATQSRLQ 1167
S+ H V FL + L + + + ESLYRLLWVYMIR + N+AT+SRL
Sbjct: 357 SQKHFFLANWVQFLNSCLSHLKNKDPQVARVALESLYRLLWVYMIRNNADGNAATRSRLD 416
Query: 1168 SIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIAQERLDFAMREIVFDLLSVGRPIKLILTP 1227
SI SLFPKG++ +VPRD PLNIFVKII FI+Q++LDFA +EI+FDLL V + L
Sbjct: 417 SICGSLFPKGNRYIVPRDAPLNIFVKIIHFISQQKLDFAFKEIIFDLLCVNNRTQRSLYA 476
Query: 1228 ERMSIGLRAFLVVADSLQQKEGEPPMPRTSGVLPSGNTLRVK-KTYL-----NKVSKT 1279
ERM++G+RA +V+AD LQQK+ P MP++ G SG + K K Y+ N++SK+
Sbjct: 477 ERMNVGIRALMVIADGLQQKDDPPAMPKSMGPSASGTVHKTKRKQYITRPLTNEISKS 534
Score = 356 (130.4 bits), Expect = 1.0e-112, Sum P(6) = 1.0e-112
Identities = 76/191 (39%), Positives = 115/191 (60%)
Query: 706 LRTKEAETILQERRDLAVEFVFCLILIEVLKQLPFH-PGHDNLVTYIETVAFKHFKYREG 764
+ T E L ++ LAV ++FCL+LIE+L Q+ FH P D L+ + + FK+ +YRE
Sbjct: 139 IATPELRLKLHKKL-LAVNYLFCLVLIEILPQVEFHLPQCDPLIKKVLEICFKNVQYREP 197
Query: 765 IQNDPNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLL 824
N TN VA+ Y EV+GVL+ + F + + FM+ + EL+ K+ + Q I++L+
Sbjct: 198 SAVGINKTNHLVVAETYGEVVGVLSSTYFTHIHRIFMTHITELK-KDVSQTAAQQIVALI 256
Query: 825 MGMKFFRVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNE 884
M MKF R+ +E+FE +F+ + +VKDKDVKHA+ GL VEIL+PVAA +K E
Sbjct: 257 MSMKFLRINSSQVEDFENGLKFLDDLGSLLLEVKDKDVKHAVMGLLVEILLPVAAQIKRE 316
Query: 885 VKFIPIVSSSQ 895
++S Q
Sbjct: 317 TNIPALISLVQ 327
Score = 265 (98.3 bits), Expect = 1.3e-98, Sum P(6) = 1.3e-98
Identities = 67/200 (33%), Positives = 108/200 (54%)
Query: 893 SSQGKRRRVRGSESITLGLIDPLRASSN-DDIHSECKQGLG---------LEPPTSRSDV 942
S+ G + + + IT L + + S D + +C++ + P S +
Sbjct: 509 SASGTVHKTKRKQYITRPLTNEISKSIGIDQFYPQCRKAFDSILRLLDTQIGKPLMMSSI 568
Query: 943 QCINHCTTEEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEE 1002
Q N +EPDE+I+G+ KP++DLFRTC+AA+PRL+PD M+ +L+DLL+RLT+H+DEE
Sbjct: 569 Q--NR--GKEPDELISGDAKPKLDLFRTCIAAIPRLLPDPMSHVDLIDLLTRLTVHLDEE 624
Query: 1003 LRALAYQSLQTLVIDFPDWRHDVLA--VFYFGTHDMTIDLQWIAD------RSASIWTAG 1054
LR ++ +LQT++ +FPDWR V + +H Q + D +S + W
Sbjct: 625 LRNMSGITLQTIIGEFPDWREQVFISHISLIQSHIYDFFPQILDDSLRLMLQSLTTWKTA 684
Query: 1055 IHEDSNRNGS-VLNLSP-SC 1072
I + R ++ SP SC
Sbjct: 685 ITAEKKREAEKIIPTSPPSC 704
Score = 239 (89.2 bits), Expect = 1.0e-112, Sum P(6) = 1.0e-112
Identities = 91/327 (27%), Positives = 144/327 (44%)
Query: 1613 DPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIGKKTSYCALTYYFLLSSL 1672
DPWG L + + +LT CPSAVA AWPI++SRL+ + S
Sbjct: 901 DPWGCALSGYAEIKHLLTKCPSAVAAAWPILFSRLNAV-------------------SGY 941
Query: 1673 TDPT-PVSDNRASLLRSSAPPRKP--VSER---DSFLSLWRYLAIFSARXXXXXXXXXXR 1726
DP P +++R+SLLR S + E+ ++ L+LW+ I R
Sbjct: 942 VDPNNPQNESRSSLLRGSKSKGTSSILGEQLGQEACLALWQKYLIMCCALAPAPYNLSQR 1001
Query: 1727 CASPDLSLSWSPENVGGERGGAGVENKXXXXXXXXXXXXGLYKLLVPLLRCDT-TDVRDA 1785
SP S+ P +V A + + L + +LR + TD+RD+
Sbjct: 1002 SFSPTNSMD-GPVDVF-RSVSASLRSSRTPVPNSLSQ---LISKVCMILRWENLTDIRDS 1056
Query: 1786 VVHALGNINSEALKDLMEELSV--YIREAVDRKTE-NMXXXXXXXXXXXXXXXVFELIAE 1842
VV +G+IN A ++EEL +REA ++K E N+ V E+
Sbjct: 1057 VVLGVGSINPLAFDMMLEELKSNGILREATEKKAETNLRRRKRKDLLRLQIIRVIEVAIF 1116
Query: 1843 HGTFGACSP-TMPGLLSP-LAEYVDGARLCLELEADKQI--LREIKAHFCNFVCKMIHSF 1898
G S + +L P + +++D R+ LE + D+ I + +++ HF + +I S
Sbjct: 1117 RGLLLVHSAGSSDFILHPHVVDFIDSMRVNLESDHDRDITVVTKLRLHFAKLIHLIIDST 1176
Query: 1899 PLESRQTLLKRDLRRNLFSLFTSWAGQ 1925
P SR TL + R LF LF +W +
Sbjct: 1177 PHLSRHTLFSDERRHKLFYLFINWCSR 1203
Score = 192 (72.6 bits), Expect = 1.0e-112, Sum P(6) = 1.0e-112
Identities = 41/94 (43%), Positives = 59/94 (62%)
Query: 1964 SLSAMSAVLTCGPVFDPSTLLAEDGVLYPWLDMLLASSEEKTYQIGCQTVIL-LLECNPD 2022
S+ AMS +L CGP+F+P+ + EDG LY WL+ L+ S+ T Q + ++ +LE N +
Sbjct: 1224 SVLAMSRILCCGPIFEPAKSIGEDGYLYGWLEKLIISTNP-TMQAEVEEMLAWMLELN-E 1281
Query: 2023 MGPLLDWVVDRCYTASVQVADGCFLALATLFSAR 2056
G LLDW++ +CYT VA CF AL +FS R
Sbjct: 1282 SGVLLDWLMMQCYTQPPTVACRCFRALVRVFSRR 1315
Score = 137 (53.3 bits), Expect = 1.0e-112, Sum P(6) = 1.0e-112
Identities = 36/115 (31%), Positives = 61/115 (53%)
Query: 1536 EHADQNVIDVIDKACPDILDQCMSQLTCADKTAALSASCIDLQWIADRSASIWTAGIHED 1595
E D VIDV+D+A P ++ + + + ++ +S + +D + D+ ++I T +
Sbjct: 835 EMIDTPVIDVLDQATPYVVKKYIEHVPIKER---MSWN-MDFSSVCDKISTIETDNTLVN 890
Query: 1596 SNRNGSVLNLSPSCSAPDPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTL 1650
S+R DPWG L + + +LT CPSAVA AWPI++SRL+ +
Sbjct: 891 SDRGNEYFQW-------DPWGCALSGYAEIKHLLTKCPSAVAAAWPILFSRLNAV 938
Score = 128 (50.1 bits), Expect = 1.0e-112, Sum P(6) = 1.0e-112
Identities = 31/73 (42%), Positives = 40/73 (54%)
Query: 537 GEYVMRSLFADFTAQAEKKLDQVLAE-PQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCL 595
G +V ++ D E+KL V E P EK L+K LQRG D FD L ++E CL
Sbjct: 54 GPFVGQASLMDLFNIFERKLHIVTEEEPLEKMLNKTLQRGGDLYFDNLCHTLHGLSEICL 113
Query: 596 PSILRALFAWYER 608
P IL+ L WYE+
Sbjct: 114 PPILKVLVEWYEK 126
Score = 112 (44.5 bits), Expect = 1.6e-76, Sum P(5) = 1.6e-76
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 1076 DPWGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIVP 1119
DPWG L + + +LT CPSAVA AWPI++SRL+ + + P
Sbjct: 901 DPWGCALSGYAEIKHLLTKCPSAVAAAWPILFSRLNAVSGYVDP 944
Score = 107 (42.7 bits), Expect = 1.4e-109, Sum P(6) = 1.4e-109
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 1421 NLTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGLGL-EPPTSRSDVQC 1479
N T S V HQ+EG A+V LC R PR ++V IL+E++++ +LG+ + + P +
Sbjct: 790 NSTLS-VLHQMEGLAIVYLCQTRSNPRAIAVKILKEIQLIYDLLGIEMIDTPV----IDV 844
Query: 1480 IDHCTTDVMQ 1489
+D T V++
Sbjct: 845 LDQATPYVVK 854
Score = 44 (20.5 bits), Expect = 1.1e-74, Sum P(5) = 1.1e-74
Identities = 17/48 (35%), Positives = 23/48 (47%)
Query: 1500 SYPTRGENV--EQSSRLCTQELRNWIRP-SEQPPWPSCSEHADQNVID 1544
SYP + E S RL T+ N + + PW S E DQNV++
Sbjct: 1404 SYPHLTVTIFSEVSYRLETESCSNKSQLLALLQPWISNLELVDQNVVE 1451
Score = 40 (19.1 bits), Expect = 5.4e-08, Sum P(2) = 5.4e-08
Identities = 19/74 (25%), Positives = 28/74 (37%)
Query: 69 KDACLVNRRVWVQYQPRWLKFYLPLFHVSCLLSVVSYLPVAENDNPXXXXXXXXXXDSES 128
++ACL +W +Y L L LS S+ P D P S
Sbjct: 974 QEACLA---LWQKY----LIMCCALAPAPYNLSQRSFSPTNSMDGPVDVFRSVSASLRSS 1026
Query: 129 RSDVTDGSSQVTSR 142
R+ V + SQ+ S+
Sbjct: 1027 RTPVPNSLSQLISK 1040
Score = 38 (18.4 bits), Expect = 2.1e-102, Sum P(6) = 2.1e-102
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 1320 VCRYLESVGHPLRASSNDDIHSECKQV 1346
V +Y+E V R S N D S C ++
Sbjct: 853 VKKYIEHVPIKERMSWNMDFSSVCDKI 879
Score = 38 (18.4 bits), Expect = 3.0e-15, Sum P(3) = 3.0e-15
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 781 YAEVLGVLAQ--SRFQSVRKRFMSELKELR-FKEPNTHTTQSIISLLMGMK 828
YAE+ +L + S + S L + + +PN +S SLL G K
Sbjct: 910 YAEIKHLLTKCPSAVAAAWPILFSRLNAVSGYVDPNNPQNESRSSLLRGSK 960
Score = 37 (18.1 bits), Expect = 5.9e-74, Sum P(5) = 5.9e-74
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 1532 PSCSEHADQNVIDVI 1546
P+ HA Q +I+VI
Sbjct: 1642 PALCRHARQTIINVI 1656
Score = 37 (18.1 bits), Expect = 1.4e-71, Sum P(5) = 1.4e-71
Identities = 8/32 (25%), Positives = 18/32 (56%)
Query: 443 SSQVTSRTDCDTPGNFVQKEVTLTREILSRNR 474
++Q+ T+ + VQK T T +++S+ +
Sbjct: 310 AAQIKRETNIPALISLVQKLYTTTNDMISKKQ 341
>RGD|1310296 [details] [associations]
symbol:Med6 "mediator complex subunit 6" species:10116 "Rattus
norvegicus" [GO:0001104 "RNA polymerase II transcription cofactor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003713 "transcription coactivator activity" evidence=IEA;ISO]
[GO:0005634 "nucleus" evidence=ISO] [GO:0008134 "transcription
factor binding" evidence=IEA;ISO] [GO:0016592 "mediator complex"
evidence=IEA;ISO] [GO:0019827 "stem cell maintenance"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO]
InterPro:IPR007018 InterPro:IPR016820 Pfam:PF04934
PIRSF:PIRSF023869 RGD:1310296 GO:GO:0003677 GO:GO:0045944
GO:GO:0003713 EMBL:CH473982 GO:GO:0016592 GO:GO:0001104
eggNOG:COG5097 HOGENOM:HOG000035127 KO:K15128 PANTHER:PTHR13104
CTD:10001 GeneTree:ENSGT00390000017666 HOVERGEN:HBG006825
OrthoDB:EOG44MXSS EMBL:BC158786 IPI:IPI00365871
RefSeq:NP_001100212.1 UniGene:Rn.97814 STRING:B0BNE1
Ensembl:ENSRNOT00000009483 GeneID:299180 KEGG:rno:299180
UCSC:RGD:1310296 NextBio:644929 Genevestigator:B0BNE1
Uniprot:B0BNE1
Length = 246
Score = 352 (129.0 bits), Expect = 9.2e-34, Sum P(3) = 9.2e-34
Identities = 73/120 (60%), Positives = 90/120 (75%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVK-KEIIKEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + +D VK K KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEE-QDKVKPKAKRKEEPSSIFQRQRVDALLIDLRQKF 188
Score = 46 (21.3 bits), Expect = 9.2e-34, Sum P(3) = 9.2e-34
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 1946 SNPGPEALKTSEEELQLTSLSAMSAVLTCGP 1976
+ P PE +K+ E+E ++ SA V T GP
Sbjct: 211 AEPLPETVKSEEKE---SAKSAQQTVSTKGP 238
Score = 41 (19.5 bits), Expect = 9.2e-34, Sum P(3) = 9.2e-34
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1244 LQQKEGEPPMP 1254
+QQK GE P+P
Sbjct: 193 VQQKSGEKPVP 203
>UNIPROTKB|E1BZ92 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9031 "Gallus gallus" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 GO:GO:0016592
GO:GO:0001104 KO:K15128 PANTHER:PTHR13104 CTD:10001
GeneTree:ENSGT00390000017666 OMA:RVDMLLA EMBL:AADN02003141
IPI:IPI00592512 RefSeq:NP_001152897.1 UniGene:Gga.10840
UniGene:Gga.38055 Ensembl:ENSGALT00000022450 GeneID:426282
KEGG:gga:426282 NextBio:20827936 Uniprot:E1BZ92
Length = 246
Score = 349 (127.9 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 70/119 (58%), Positives = 86/119 (72%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVDMLLSELTRHF 356
FEE S +Y+P+KGY W K + + K KEEPSSIFQR RVD LL +L + F
Sbjct: 130 FEEAMSYCRYHPSKGYWWHFKDQEEREKAKPKAKKKEEPSSIFQRHRVDALLLDLRQKF 188
Score = 48 (22.0 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 1948 PGPEALKTSEEELQLTSLSAMSAVLTCGP 1976
P PEA+KT E+E T +A + GP
Sbjct: 213 PAPEAVKTEEKE---TVKNAQQSAAAKGP 238
Score = 40 (19.1 bits), Expect = 1.5e-33, Sum P(3) = 1.5e-33
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1244 LQQKEGEPPMP 1254
+QQK GE P+P
Sbjct: 193 VQQKPGEKPIP 203
>UNIPROTKB|Q3SZY9 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9913 "Bos taurus" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 GO:GO:0003677
GO:GO:0045944 GO:GO:0003713 GO:GO:0016592 GO:GO:0001104
eggNOG:COG5097 HOGENOM:HOG000035127 KO:K15128 PANTHER:PTHR13104
EMBL:BC102648 IPI:IPI00712406 RefSeq:NP_001029409.1
UniGene:Bt.87821 STRING:Q3SZY9 PRIDE:Q3SZY9
Ensembl:ENSBTAT00000008922 GeneID:505293 KEGG:bta:505293 CTD:10001
GeneTree:ENSGT00390000017666 HOVERGEN:HBG006825 InParanoid:Q3SZY9
OMA:RVDMLLA OrthoDB:EOG44MXSS NextBio:20867066 Uniprot:Q3SZY9
Length = 246
Score = 354 (129.7 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 72/120 (60%), Positives = 91/120 (75%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEII-KEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + +D VK ++ KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEE-QDKVKPKVKRKEEPSSIFQRQRVDALLLDLRQKF 188
Score = 41 (19.5 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1244 LQQKEGEPPMP 1254
+QQK GE P+P
Sbjct: 193 VQQKSGEKPVP 203
Score = 41 (19.5 bits), Expect = 1.9e-33, Sum P(3) = 1.9e-33
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1946 SNPGPEALKTSEEELQLTSLSAMSAVLTCGP 1976
+ P PE +K+ E+E T+ + V T GP
Sbjct: 211 AEPLPETVKSEEKE---TAKNVQQTVGTKGP 238
>UNIPROTKB|E2R2L6 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9615 "Canis lupus familiaris" [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA]
InterPro:IPR007018 InterPro:IPR016820 Pfam:PF04934
PIRSF:PIRSF023869 GO:GO:0003677 GO:GO:0045944 GO:GO:0003713
GO:GO:0016592 GO:GO:0001104 KO:K15128 PANTHER:PTHR13104 CTD:10001
GeneTree:ENSGT00390000017666 OMA:RVDMLLA EMBL:AAEX03005819
EMBL:AAEX03005820 RefSeq:XP_547885.2 Ensembl:ENSCAFT00000026406
GeneID:490763 KEGG:cfa:490763 NextBio:20863719 Uniprot:E2R2L6
Length = 246
Score = 352 (129.0 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 73/120 (60%), Positives = 90/120 (75%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVK-KEIIKEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + +D VK K KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEE-QDKVKPKAKRKEEPSSIFQRQRVDALLLDLRQKF 188
Score = 42 (19.8 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1946 SNPGPEALKTSEEELQLTSLSAMSAVLTCGP 1976
+ P PE +K+ E+E T+ + V T GP
Sbjct: 211 AEPIPETVKSEEKE---TTKNVQQIVSTKGP 238
Score = 41 (19.5 bits), Expect = 2.4e-33, Sum P(3) = 2.4e-33
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1244 LQQKEGEPPMP 1254
+QQK GE P+P
Sbjct: 193 VQQKSGEKPVP 203
>FB|FBgn0024330 [details] [associations]
symbol:MED6 "Mediator complex subunit 6" species:7227
"Drosophila melanogaster" [GO:0016592 "mediator complex"
evidence=ISS;IDA;IMP] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=ISS;IMP] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=ISS;IMP] [GO:0005634
"nucleus" evidence=ISS;IDA] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0046331 "lateral inhibition"
evidence=IMP] InterPro:IPR007018 InterPro:IPR016820 Pfam:PF04934
PIRSF:PIRSF023869 EMBL:AE014297 GO:GO:0005737 GO:GO:0046331
GO:GO:0006367 GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097 KO:K15128
PANTHER:PTHR13104 CTD:10001 GeneTree:ENSGT00390000017666
OMA:RVDMLLA EMBL:AY118517 EMBL:BT001633 RefSeq:NP_001163577.1
RefSeq:NP_001163578.1 RefSeq:NP_651988.2 RefSeq:NP_731403.2
UniGene:Dm.12701 ProteinModelPortal:Q8MSX2 IntAct:Q8MSX2
MINT:MINT-327804 STRING:Q8MSX2 PaxDb:Q8MSX2 PRIDE:Q8MSX2
EnsemblMetazoa:FBtr0082161 EnsemblMetazoa:FBtr0082162
EnsemblMetazoa:FBtr0301872 EnsemblMetazoa:FBtr0301873 GeneID:44728
KEGG:dme:Dmel_CG9473 FlyBase:FBgn0024330 InParanoid:Q8MSX2
OrthoDB:EOG4TB2TD PhylomeDB:Q8MSX2 GenomeRNAi:44728 NextBio:837577
Bgee:Q8MSX2 Uniprot:Q8MSX2
Length = 249
Score = 377 (137.8 bits), Expect = 3.5e-33, P = 3.5e-33
Identities = 78/134 (58%), Positives = 102/134 (76%)
Query: 229 HTMLYLCLWVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLL 288
H M+ L +LHV EPILYVIRKQHRH+ + TPIADYYII G VY+APDLA+VI+SR+L
Sbjct: 61 HNMIGLEYILLHVAEPILYVIRKQHRHNPSEATPIADYYIIGGTVYKAPDLANVINSRIL 120
Query: 289 STVHHLQSAFEEVNSLSKYNPNKGYSWD---SKMLPQGKDTVKKEI--IKEEPS-SIFQR 342
+TV +LQSAFEE +S ++Y+PNKGY+WD +K+ + KK+ K+E S ++FQ+
Sbjct: 121 NTVVNLQSAFEEASSYARYHPNKGYTWDFSSNKVFSDRSKSDKKDANSAKDENSGTLFQK 180
Query: 343 QRVDMLLSELTRHF 356
QRVDMLL+EL R F
Sbjct: 181 QRVDMLLAELLRKF 194
>MGI|MGI:1917042 [details] [associations]
symbol:Med6 "mediator of RNA polymerase II transcription,
subunit 6 homolog (yeast)" species:10090 "Mus musculus" [GO:0001104
"RNA polymerase II transcription cofactor activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0016592 "mediator complex" evidence=ISO;IDA]
[GO:0019827 "stem cell maintenance" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] InterPro:IPR007018 InterPro:IPR016820
Pfam:PF04934 PIRSF:PIRSF023869 MGI:MGI:1917042 GO:GO:0003677
GO:GO:0045944 Reactome:REACT_127416 GO:GO:0003713 GO:GO:0019827
Reactome:REACT_27166 GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097
HOGENOM:HOG000035127 KO:K15128 PANTHER:PTHR13104 CTD:10001
GeneTree:ENSGT00390000017666 HOVERGEN:HBG006825 OMA:RVDMLLA
EMBL:AK089101 EMBL:AK171784 EMBL:BC013096 IPI:IPI00177199
RefSeq:NP_081489.2 UniGene:Mm.279993 ProteinModelPortal:Q921D4
SMR:Q921D4 IntAct:Q921D4 MINT:MINT-217697 STRING:Q921D4
PhosphoSite:Q921D4 PRIDE:Q921D4 DNASU:69792
Ensembl:ENSMUST00000002756 Ensembl:ENSMUST00000161211 GeneID:69792
KEGG:mmu:69792 UCSC:uc007ocl.1 InParanoid:Q921D4 ChiTaRS:MED6
NextBio:330356 Bgee:Q921D4 Genevestigator:Q921D4 Uniprot:Q921D4
Length = 246
Score = 350 (128.3 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 70/119 (58%), Positives = 87/119 (73%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + + K KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEEQEKVKPKAKRKEEPSSIFQRQRVDALLIDLRQKF 188
Score = 41 (19.5 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1244 LQQKEGEPPMP 1254
+QQK GE P+P
Sbjct: 193 VQQKSGEKPVP 203
Score = 38 (18.4 bits), Expect = 1.0e-32, Sum P(3) = 1.0e-32
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 1946 SNPGPEALKTSEEELQLTSLSAMSAVLTCGP 1976
+ P PE +K+ E+E ++ + V T GP
Sbjct: 211 AEPLPETVKSEEKE---STKNIQQTVSTKGP 238
>UNIPROTKB|F1S496 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9823 "Sus scrofa" [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0003713
"transcription coactivator activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 GO:GO:0003677
GO:GO:0045944 GO:GO:0003713 GO:GO:0016592 GO:GO:0001104
PANTHER:PTHR13104 GeneTree:ENSGT00390000017666 OMA:RVDMLLA
EMBL:CU469452 Ensembl:ENSSSCT00000002590 Uniprot:F1S496
Length = 248
Score = 353 (129.3 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 71/120 (59%), Positives = 91/120 (75%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEII-KEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + +D +K ++ KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEE-QDKIKPKVKRKEEPSSIFQRQRVDALLLDLRQKF 188
Score = 41 (19.5 bits), Expect = 1.1e-31, Sum P(2) = 1.1e-31
Identities = 7/11 (63%), Positives = 9/11 (81%)
Query: 1244 LQQKEGEPPMP 1254
+QQK GE P+P
Sbjct: 193 VQQKSGEKPVP 203
>CGD|CAL0000189 [details] [associations]
symbol:CAS4 species:5476 "Candida albicans" [GO:0000920
"cytokinetic cell separation" evidence=IMP] [GO:0007163
"establishment or maintenance of cell polarity" evidence=IMP]
[GO:0031505 "fungal-type cell wall organization" evidence=IMP]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0035690 "cellular response to
drug" evidence=IMP] [GO:0051286 "cell tip" evidence=IEA]
[GO:0043332 "mating projection tip" evidence=IEA] [GO:0000131
"incipient cellular bud site" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0032153 "cell division site"
evidence=IEA] [GO:0005933 "cellular bud" evidence=IEA] [GO:0007118
"budding cell apical bud growth" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0030037 "actin filament
reorganization involved in cell cycle" evidence=IEA] [GO:2000769
"regulation of establishment or maintenance of cell polarity
regulating cell shape" evidence=IEA] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:1900233
"positive regulation of single-species biofilm formation on
inanimate substrate" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0009267 "cellular response to starvation"
evidence=IMP] [GO:0036244 "cellular response to neutral pH"
evidence=IMP] [GO:0071216 "cellular response to biotic stimulus"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] InterPro:IPR016024
GO:GO:0071216 GO:GO:0036244 GO:GO:0036180 GO:GO:0036178
SUPFAM:SSF48371 GO:GO:0007163 GO:GO:0003700 GO:GO:0035690
GO:GO:0031505 GO:GO:0009267 GO:GO:0000920 EMBL:AACQ01000014
GO:GO:0036170 GO:GO:0044011 GO:GO:1900233 eggNOG:NOG282247
InterPro:IPR025614 InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222
RefSeq:XP_721647.1 STRING:Q5AJA0 GeneID:3636725 KEGG:cal:CaO19.9261
CGD:CAL0078654 Uniprot:Q5AJA0
Length = 2830
Score = 277 (102.6 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 85/366 (23%), Positives = 167/366 (45%)
Query: 538 EYVMRSLFADFTAQAEKKLDQVLAEP--QEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCL 595
EY + +F F AE+KL+ L P +E P+ ++ G D FD+++ A G +A
Sbjct: 361 EYTLHIIFTQFVRHAERKLNLCLDYPLNEEPPILDLIAEGVDTEFDKIISALGYIARRKP 420
Query: 596 PSILRALFAWYERQMRPSVEAAANPHISSXXXXXXXXXXXXXXXXXXXXXXXXX-XXPVV 654
++ ++ W R+ + V + A + P
Sbjct: 421 KPVIDSVMFW--RKSKSEVASMAATEVEKAVGVAQTNLLRISKTSSATATTTTSPISPSN 478
Query: 655 IFLDKAYKGPSHVAKS----GRKCFGT---ESGPSKILMLRPFRRVQE-HTVL--HEQYF 704
+ K S +S +K F S ++ + V E +V +Q++
Sbjct: 479 PGIAKNSNTASTAKRSLSLMRKKSFSRIAHRRNVSSSAAIQSSQNVPESESVFMKQKQFY 538
Query: 705 RLRTKEA-ETILQ-ERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYR 762
+ +A ET + +R+ LA ++ C +LIE++KQ P +L + +E + + K
Sbjct: 539 DDQISQAKETAVHADRKSLASIYILCRVLIEIVKQTPLSVMGSDLSSKLEEIVYTQLKTT 598
Query: 763 EGIQNDPNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIIS 822
+ I + +L+AE+LG +++ RF SV RF+++L+++ + H + +
Sbjct: 599 DPISTSQSLVRAANW-NLFAELLGFMSRERFVSVNDRFIADLEKV--PQQIRHEDEPKLY 655
Query: 823 LLM-GMKFFRVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATV 881
LL+ GMK+ ++ + P+EEFE S +F+Q A++F ++ V +A +F ++ +P+A +
Sbjct: 656 LLINGMKYLKLTIYPLEEFEESAEFIQSLAKFFDKTTNETVLYAYCEVFSQLFLPLANVM 715
Query: 882 KNEVKF 887
E +
Sbjct: 716 TAEANY 721
Score = 167 (63.8 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 71/302 (23%), Positives = 129/302 (42%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIRE-AVDRKTENMXXXXX 1825
++K+++PLL+ V+++V+ L +IN LK +E + + + E + KT N
Sbjct: 1435 VFKMVLPLLKSSQPMVKESVIVGLSHININILKSFLENIPLAVEEWNTNMKTRNPQDDAF 1494
Query: 1826 XXXXXXXXXXVFELIAEHGTFGACSPTMPGLLSPLAEYVDGARLCLELEADKQILREIKA 1885
+ E H + L++ + + V ++ + + R ++
Sbjct: 1495 RIEVVHILTNLTEKFGSHELIYTDDSIVANLVA-IVKNVKNFLSEPAIQTNFECQR-LRR 1552
Query: 1886 HFCNFVCKMIHSFPLESRQTL---LKRDLRRNLFSLFTSWAGQYGRNLNITQS-YSVSMP 1941
+FC F+ + +++ LE++ L L + R F+ W G YG + +T+ Y+ +
Sbjct: 1553 YFCGFL-ENVYT-GLEAKSDLEKWLPFEARVACFNYLKEWCG-YGDSSAVTEERYNAIIS 1609
Query: 1942 NPPASNPGPEALKTSEEE---LQLTSLSAMSAVLTCGPVFD----PSTLLA---EDGVLY 1991
GP AL E E LQL SL M A+L G + P L + L
Sbjct: 1610 RIKTEKAGPSALAILEIERKKLQLASLKCM-AILCSGQIKKKIEIPGNLAVVSFDIPGLM 1668
Query: 1992 PWLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALAT 2051
W+ LL S+ EK +IG ++E N + ++ VV RCY + + + F
Sbjct: 1669 NWIQALLESNIEKIKEIGHCASRNVIEKNFEFQDIISAVVQRCYVSQTSL-ESYFCLFVE 1727
Query: 2052 LF 2053
+F
Sbjct: 1728 IF 1729
Score = 85 (35.0 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 27/122 (22%), Positives = 62/122 (50%)
Query: 1142 SLYRLLWVYMIRIKCESNSATQSRLQSIVNSLF------PKGSKAVVPRDTPLNIFVKII 1195
S+ RL+WVY+ R+ N+ T RL +I LF K ++ + P + +++I
Sbjct: 817 SITRLIWVYLNRLPDTLNN-TIKRLDAIFELLFFHNNATSKKNQWISPDLFLIGSLIELI 875
Query: 1196 QFIAQERLDFAMREIVFDLLSV---GRPIKLILTPERMSIGLRAFLVVADSLQQKEGEPP 1252
+ + L++ + +++ LL++ G ++ PE++ I ++++L + + + +P
Sbjct: 876 RIVGYNHLNYVLEQVLIRLLNMSFNGTSLENAF-PEKLIIVIKSYLAILKDYEIGD-KPS 933
Query: 1253 MP 1254
P
Sbjct: 934 FP 935
Score = 50 (22.7 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 EYVMRSLFADFTAQAEKKLDQVLAEP 208
EY + +F F AE+KL+ L P
Sbjct: 361 EYTLHIIFTQFVRHAERKLNLCLDYP 386
Score = 48 (22.0 bits), Expect = 9.6e-28, Sum P(5) = 9.6e-28
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 961 RKPRIDLFRTCVAAVPRLIPDAMTGG--------ELVDLLSRLTLHMDEELRALAYQSLQ 1012
++ I LF T + A+P I A ++VD+L R +H D + + +SL+
Sbjct: 1017 KEVHIQLFATVIEAIPWGIVGASGDNSQNLIPFKQVVDILIRGAIHPDSRISMASIKSLK 1076
Query: 1013 TL 1014
L
Sbjct: 1077 YL 1078
Score = 41 (19.5 bits), Expect = 4.4e-16, Sum P(4) = 4.4e-16
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 1141 ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPL 1188
ESLY + Y+ + N + ++I++ L P SK ++ +TPL
Sbjct: 1810 ESLYNRI-SYLTQ---NINFIFPAAREAILSLLVPMVSKVILNYETPL 1853
Score = 40 (19.1 bits), Expect = 1.8e-30, Sum P(5) = 1.8e-30
Identities = 27/108 (25%), Positives = 44/108 (40%)
Query: 239 LHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAF 298
+H +P L H E +T A + ++ QAP + I +RL + H
Sbjct: 130 IHKSQPQLPQESSDHLTQKETSTVSASSH---PMLDQAPQM---IDARL-ERIEH----- 177
Query: 299 EEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVD 346
EV++ ++ N Y +M P +DT + E S Q+VD
Sbjct: 178 -EVDNFNERENN--YQ-HPQMQPYSQDTESGLSLGTEDSQNISSQKVD 221
Score = 39 (18.8 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 1431 VEGFALVMLCNVRLTPRRLSVHILREVKMLNKVL 1464
+EG L LC+ R + +L+ V+ ++ +
Sbjct: 1201 IEGNGLFFLCSQNPKTRYYGIKVLKLVEQFDQAV 1234
Score = 38 (18.4 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 883 NEVKFIPIVSSSQGKRRRVRGSESITLGLIDPLRASSNDDIHSECKQGLGLEPPT 937
N+ +IP SS G + R + + L A+ D S Q + PT
Sbjct: 2671 NKRSYIPFRSSRHGNKARAEVFSTPKIPLSAGFDANDLDQTPSSI-QSTAISSPT 2724
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1511 SSRLCTQELRNWIRPSEQPPWPSCS 1535
SS + + L N + PS Q P P S
Sbjct: 307 SSPMSSFPLHNRVEPSPQLPPPMSS 331
Score = 37 (18.1 bits), Expect = 1.2e-26, Sum P(5) = 1.2e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 1272 YLNKVSKTYLILLLFYRFDGGNCNN 1296
+LN V + LI LL F+G + N
Sbjct: 882 HLNYVLEQVLIRLLNMSFNGTSLEN 906
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1154 IKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPL 1188
IK ES S L +N +FP +A++ P+
Sbjct: 1807 IKPESLYNRISYLTQNINFIFPAAREAILSLLVPM 1841
>UNIPROTKB|Q5AJA0 [details] [associations]
symbol:CAS4 "Potential regulator of polarized morphogenesis
Tao3p" species:237561 "Candida albicans SC5314" [GO:0000920
"cytokinetic cell separation" evidence=IMP] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0007163 "establishment or
maintenance of cell polarity" evidence=IMP] [GO:0009267 "cellular
response to starvation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0031505 "fungal-type cell wall
organization" evidence=IMP] [GO:0035690 "cellular response to drug"
evidence=IMP] [GO:0036170 "filamentous growth of a population of
unicellular organisms in response to starvation" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044011 "single-species
biofilm formation on inanimate substrate" evidence=IMP] [GO:0071216
"cellular response to biotic stimulus" evidence=IMP] [GO:1900233
"positive regulation of single-species biofilm formation on
inanimate substrate" evidence=IMP] InterPro:IPR016024 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 SUPFAM:SSF48371
GO:GO:0007163 GO:GO:0003700 GO:GO:0035690 GO:GO:0031505
GO:GO:0009267 GO:GO:0000920 EMBL:AACQ01000014 GO:GO:0036170
GO:GO:0044011 GO:GO:1900233 eggNOG:NOG282247 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222 RefSeq:XP_721647.1
STRING:Q5AJA0 GeneID:3636725 KEGG:cal:CaO19.9261 CGD:CAL0078654
Uniprot:Q5AJA0
Length = 2830
Score = 277 (102.6 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 85/366 (23%), Positives = 167/366 (45%)
Query: 538 EYVMRSLFADFTAQAEKKLDQVLAEP--QEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCL 595
EY + +F F AE+KL+ L P +E P+ ++ G D FD+++ A G +A
Sbjct: 361 EYTLHIIFTQFVRHAERKLNLCLDYPLNEEPPILDLIAEGVDTEFDKIISALGYIARRKP 420
Query: 596 PSILRALFAWYERQMRPSVEAAANPHISSXXXXXXXXXXXXXXXXXXXXXXXXX-XXPVV 654
++ ++ W R+ + V + A + P
Sbjct: 421 KPVIDSVMFW--RKSKSEVASMAATEVEKAVGVAQTNLLRISKTSSATATTTTSPISPSN 478
Query: 655 IFLDKAYKGPSHVAKS----GRKCFGT---ESGPSKILMLRPFRRVQE-HTVL--HEQYF 704
+ K S +S +K F S ++ + V E +V +Q++
Sbjct: 479 PGIAKNSNTASTAKRSLSLMRKKSFSRIAHRRNVSSSAAIQSSQNVPESESVFMKQKQFY 538
Query: 705 RLRTKEA-ETILQ-ERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYR 762
+ +A ET + +R+ LA ++ C +LIE++KQ P +L + +E + + K
Sbjct: 539 DDQISQAKETAVHADRKSLASIYILCRVLIEIVKQTPLSVMGSDLSSKLEEIVYTQLKTT 598
Query: 763 EGIQNDPNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIIS 822
+ I + +L+AE+LG +++ RF SV RF+++L+++ + H + +
Sbjct: 599 DPISTSQSLVRAANW-NLFAELLGFMSRERFVSVNDRFIADLEKV--PQQIRHEDEPKLY 655
Query: 823 LLM-GMKFFRVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATV 881
LL+ GMK+ ++ + P+EEFE S +F+Q A++F ++ V +A +F ++ +P+A +
Sbjct: 656 LLINGMKYLKLTIYPLEEFEESAEFIQSLAKFFDKTTNETVLYAYCEVFSQLFLPLANVM 715
Query: 882 KNEVKF 887
E +
Sbjct: 716 TAEANY 721
Score = 167 (63.8 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 71/302 (23%), Positives = 129/302 (42%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIRE-AVDRKTENMXXXXX 1825
++K+++PLL+ V+++V+ L +IN LK +E + + + E + KT N
Sbjct: 1435 VFKMVLPLLKSSQPMVKESVIVGLSHININILKSFLENIPLAVEEWNTNMKTRNPQDDAF 1494
Query: 1826 XXXXXXXXXXVFELIAEHGTFGACSPTMPGLLSPLAEYVDGARLCLELEADKQILREIKA 1885
+ E H + L++ + + V ++ + + R ++
Sbjct: 1495 RIEVVHILTNLTEKFGSHELIYTDDSIVANLVA-IVKNVKNFLSEPAIQTNFECQR-LRR 1552
Query: 1886 HFCNFVCKMIHSFPLESRQTL---LKRDLRRNLFSLFTSWAGQYGRNLNITQS-YSVSMP 1941
+FC F+ + +++ LE++ L L + R F+ W G YG + +T+ Y+ +
Sbjct: 1553 YFCGFL-ENVYT-GLEAKSDLEKWLPFEARVACFNYLKEWCG-YGDSSAVTEERYNAIIS 1609
Query: 1942 NPPASNPGPEALKTSEEE---LQLTSLSAMSAVLTCGPVFD----PSTLLA---EDGVLY 1991
GP AL E E LQL SL M A+L G + P L + L
Sbjct: 1610 RIKTEKAGPSALAILEIERKKLQLASLKCM-AILCSGQIKKKIEIPGNLAVVSFDIPGLM 1668
Query: 1992 PWLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRCYTASVQVADGCFLALAT 2051
W+ LL S+ EK +IG ++E N + ++ VV RCY + + + F
Sbjct: 1669 NWIQALLESNIEKIKEIGHCASRNVIEKNFEFQDIISAVVQRCYVSQTSL-ESYFCLFVE 1727
Query: 2052 LF 2053
+F
Sbjct: 1728 IF 1729
Score = 85 (35.0 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 27/122 (22%), Positives = 62/122 (50%)
Query: 1142 SLYRLLWVYMIRIKCESNSATQSRLQSIVNSLF------PKGSKAVVPRDTPLNIFVKII 1195
S+ RL+WVY+ R+ N+ T RL +I LF K ++ + P + +++I
Sbjct: 817 SITRLIWVYLNRLPDTLNN-TIKRLDAIFELLFFHNNATSKKNQWISPDLFLIGSLIELI 875
Query: 1196 QFIAQERLDFAMREIVFDLLSV---GRPIKLILTPERMSIGLRAFLVVADSLQQKEGEPP 1252
+ + L++ + +++ LL++ G ++ PE++ I ++++L + + + +P
Sbjct: 876 RIVGYNHLNYVLEQVLIRLLNMSFNGTSLENAF-PEKLIIVIKSYLAILKDYEIGD-KPS 933
Query: 1253 MP 1254
P
Sbjct: 934 FP 935
Score = 50 (22.7 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 183 EYVMRSLFADFTAQAEKKLDQVLAEP 208
EY + +F F AE+KL+ L P
Sbjct: 361 EYTLHIIFTQFVRHAERKLNLCLDYP 386
Score = 48 (22.0 bits), Expect = 9.6e-28, Sum P(5) = 9.6e-28
Identities = 17/62 (27%), Positives = 29/62 (46%)
Query: 961 RKPRIDLFRTCVAAVPRLIPDAMTGG--------ELVDLLSRLTLHMDEELRALAYQSLQ 1012
++ I LF T + A+P I A ++VD+L R +H D + + +SL+
Sbjct: 1017 KEVHIQLFATVIEAIPWGIVGASGDNSQNLIPFKQVVDILIRGAIHPDSRISMASIKSLK 1076
Query: 1013 TL 1014
L
Sbjct: 1077 YL 1078
Score = 41 (19.5 bits), Expect = 4.4e-16, Sum P(4) = 4.4e-16
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 1141 ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPL 1188
ESLY + Y+ + N + ++I++ L P SK ++ +TPL
Sbjct: 1810 ESLYNRI-SYLTQ---NINFIFPAAREAILSLLVPMVSKVILNYETPL 1853
Score = 40 (19.1 bits), Expect = 1.8e-30, Sum P(5) = 1.8e-30
Identities = 27/108 (25%), Positives = 44/108 (40%)
Query: 239 LHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAF 298
+H +P L H E +T A + ++ QAP + I +RL + H
Sbjct: 130 IHKSQPQLPQESSDHLTQKETSTVSASSH---PMLDQAPQM---IDARL-ERIEH----- 177
Query: 299 EEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVD 346
EV++ ++ N Y +M P +DT + E S Q+VD
Sbjct: 178 -EVDNFNERENN--YQ-HPQMQPYSQDTESGLSLGTEDSQNISSQKVD 221
Score = 39 (18.8 bits), Expect = 1.7e-31, Sum P(5) = 1.7e-31
Identities = 8/34 (23%), Positives = 17/34 (50%)
Query: 1431 VEGFALVMLCNVRLTPRRLSVHILREVKMLNKVL 1464
+EG L LC+ R + +L+ V+ ++ +
Sbjct: 1201 IEGNGLFFLCSQNPKTRYYGIKVLKLVEQFDQAV 1234
Score = 38 (18.4 bits), Expect = 3.8e-16, Sum P(3) = 3.8e-16
Identities = 14/55 (25%), Positives = 21/55 (38%)
Query: 883 NEVKFIPIVSSSQGKRRRVRGSESITLGLIDPLRASSNDDIHSECKQGLGLEPPT 937
N+ +IP SS G + R + + L A+ D S Q + PT
Sbjct: 2671 NKRSYIPFRSSRHGNKARAEVFSTPKIPLSAGFDANDLDQTPSSI-QSTAISSPT 2724
Score = 38 (18.4 bits), Expect = 0.00069, Sum P(3) = 0.00069
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 1511 SSRLCTQELRNWIRPSEQPPWPSCS 1535
SS + + L N + PS Q P P S
Sbjct: 307 SSPMSSFPLHNRVEPSPQLPPPMSS 331
Score = 37 (18.1 bits), Expect = 1.2e-26, Sum P(5) = 1.2e-26
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 1272 YLNKVSKTYLILLLFYRFDGGNCNN 1296
+LN V + LI LL F+G + N
Sbjct: 882 HLNYVLEQVLIRLLNMSFNGTSLEN 906
Score = 37 (18.1 bits), Expect = 1.1e-15, Sum P(4) = 1.1e-15
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 1154 IKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPL 1188
IK ES S L +N +FP +A++ P+
Sbjct: 1807 IKPESLYNRISYLTQNINFIFPAAREAILSLLVPM 1841
>ZFIN|ZDB-GENE-040625-61 [details] [associations]
symbol:med6 "mediator complex subunit 6"
species:7955 "Danio rerio" [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0016592 "mediator complex" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869
ZFIN:ZDB-GENE-040625-61 GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097
HOGENOM:HOG000035127 KO:K15128 PANTHER:PTHR13104 CTD:10001
GeneTree:ENSGT00390000017666 HOVERGEN:HBG006825 OrthoDB:EOG44MXSS
OMA:IAYYYVI EMBL:BC071547 IPI:IPI00489919 RefSeq:NP_001002084.1
UniGene:Dr.32670 STRING:Q6IQ63 PRIDE:Q6IQ63
Ensembl:ENSDART00000044115 GeneID:415174 KEGG:dre:415174
InParanoid:Q6IQ63 NextBio:20818844 ArrayExpress:Q6IQ63 Bgee:Q6IQ63
Uniprot:Q6IQ63
Length = 254
Score = 361 (132.1 bits), Expect = 1.7e-31, P = 1.7e-31
Identities = 76/120 (63%), Positives = 88/120 (73%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPILY+IRKQ R S Q P+ADYYIIAGVVYQAPDL SVISSR LS VH +QSA
Sbjct: 70 LLHTQEPILYIIRKQQRQSPTQVIPLADYYIIAGVVYQAPDLGSVISSRALSAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVK-KEIIKEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + K+ VK K KEEPSS+FQRQRVD LL +L F
Sbjct: 130 FDEAMSFCRYHPSKGYWWHFKDQEE-KERVKPKSKRKEEPSSLFQRQRVDTLLLDLRNKF 188
>UNIPROTKB|H9KYN6 [details] [associations]
symbol:H9KYN6 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0001104 "RNA polymerase II transcription
cofactor activity" evidence=IEA] [GO:0016592 "mediator complex"
evidence=IEA] InterPro:IPR007018 InterPro:IPR016820 Pfam:PF04934
PIRSF:PIRSF023869 GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR13104
GeneTree:ENSGT00390000017666 EMBL:AADN02073008
Ensembl:ENSGALT00000000047 Uniprot:H9KYN6
Length = 190
Score = 349 (127.9 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 70/119 (58%), Positives = 86/119 (72%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPTQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVDMLLSELTRHF 356
FEE S +Y+P+KGY W K + + K KEEPSSIFQR RVD LL +L + F
Sbjct: 130 FEEAMSYCRYHPSKGYWWHFKDQEEREKAKPKAKKKEEPSSIFQRHRVDALLLDLRQKF 188
>UNIPROTKB|G3V4A5 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 EMBL:AL357153
GO:GO:0016592 GO:GO:0001104 PANTHER:PTHR13104 HGNC:HGNC:19970
ProteinModelPortal:G3V4A5 SMR:G3V4A5 Ensembl:ENST00000554963
ArrayExpress:G3V4A5 Bgee:G3V4A5 Uniprot:G3V4A5
Length = 249
Score = 349 (127.9 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVK-KEIIKEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + +D V+ K KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEE-QDKVRPKAKRKEEPSSIFQRQRVDALLLDLRQKF 188
>UNIPROTKB|O75586 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0016592 "mediator complex" evidence=IDA;IMP]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0003713 "transcription coactivator activity" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 EMBL:AF074723
Reactome:REACT_111045 GO:GO:0003677 GO:GO:0045944 GO:GO:0003713
GO:GO:0006367 GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097 KO:K15128
PANTHER:PTHR13104 CTD:10001 HOVERGEN:HBG006825 OrthoDB:EOG44MXSS
EMBL:BT006831 EMBL:CR541697 EMBL:AK222587 EMBL:AK223346
EMBL:BC004106 EMBL:U78082 EMBL:AF155104 IPI:IPI00942495
RefSeq:NP_005457.2 UniGene:Hs.497353 ProteinModelPortal:O75586
SMR:O75586 DIP:DIP-31456N IntAct:O75586 MINT:MINT-244143
STRING:O75586 PhosphoSite:O75586 PaxDb:O75586 PeptideAtlas:O75586
PRIDE:O75586 DNASU:10001 Ensembl:ENST00000256379 GeneID:10001
KEGG:hsa:10001 UCSC:uc001xmf.3 GeneCards:GC14M071050
HGNC:HGNC:19970 MIM:602984 neXtProt:NX_O75586 PharmGKB:PA134868263
InParanoid:O75586 PhylomeDB:O75586 GenomeRNAi:10001 NextBio:37771
ArrayExpress:O75586 Bgee:O75586 CleanEx:HS_MED6
Genevestigator:O75586 GermOnline:ENSG00000133997 Uniprot:O75586
Length = 246
Score = 349 (127.9 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 72/120 (60%), Positives = 90/120 (75%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSKMLPQGKDTVK-KEIIKEEPSSIFQRQRVDMLLSELTRHF 356
F+E S +Y+P+KGY W K + +D V+ K KEEPSSIFQRQRVD LL +L + F
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFKDHEE-QDKVRPKAKRKEEPSSIFQRQRVDALLLDLRQKF 188
>ASPGD|ASPL0000058064 [details] [associations]
symbol:AN0594 species:162425 "Emericella nidulans"
[GO:0007118 "budding cell apical bud growth" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000920
"cytokinetic cell separation" evidence=IEA] [GO:0030037 "actin
filament reorganization involved in cell cycle" evidence=IEA]
[GO:2000769 "regulation of establishment or maintenance of cell
polarity regulating cell shape" evidence=IEA] [GO:0051286 "cell
tip" evidence=IEA] [GO:0043332 "mating projection tip"
evidence=IEA] [GO:0000131 "incipient cellular bud site"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0032153
"cell division site" evidence=IEA] [GO:0005933 "cellular bud"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
EMBL:BN001308 InterPro:IPR025614 InterPro:IPR025481 Pfam:PF14225
Pfam:PF14222 OMA:WAMECTS EnsemblFungi:CADANIAT00002080
HOGENOM:HOG000216559 Uniprot:C8VSB2
Length = 2575
Score = 179 (68.1 bits), Expect = 4.6e-29, Sum P(6) = 4.6e-29
Identities = 46/178 (25%), Positives = 89/178 (50%)
Query: 706 LRTKEAETILQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGI 765
L ++ + +L ERR ++ C +LIE+ Q ++ +E + F K +
Sbjct: 345 LLSRHDDIVLTERRATVSVYLVCRVLIEIFNQSSLESITVDMADRLEDIVFGQLKTVDPD 404
Query: 766 QNDPNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSEL----KELRFKEPNTHTTQSII 821
Q + + +Y+++LG++++ +F SV RF++EL KE + P+
Sbjct: 405 QITASPLRMANWR-IYSQLLGIMSEEKFTSVTTRFLTELEKYQKEESLRGPSKEGDARTE 463
Query: 822 SLLMGMKFFRVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAA 879
L+ G+K R++ P E++ S FM+ A+ F + + +K A +F ++L+PVAA
Sbjct: 464 LLISGLKHVRIRTSP-EKWPKSCDFMRSLARLFVNAHGQRIKQAYCSIFEKLLLPVAA 520
Score = 144 (55.7 bits), Expect = 4.6e-29, Sum P(6) = 4.6e-29
Identities = 42/135 (31%), Positives = 71/135 (52%)
Query: 1138 PLAESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPL--NIFVKII 1195
P +++ RL+W Y R +S + T ++ +V P G + + D PL V++I
Sbjct: 594 PALQAMCRLVWTYFFRYS-DSPTVTLRKIDEVVKVALPAGKRTYLSTD-PLVAEPLVQLI 651
Query: 1196 QFIAQERLDFAMREIVFDL------LSVGRPIKLI-LTPERMSIGLRAFL-VVADSLQQK 1247
+ I + D R I+F L LS GR IK+ + PE+M IG+++FL ++AD
Sbjct: 652 RMIGFKHPDVCFRTIIFPLINSDYFLSPGRDIKIEQMEPEKMVIGIQSFLAIIADLENCD 711
Query: 1248 EGEPPMPRTSGVLPS 1262
+ PP+P +G +P+
Sbjct: 712 QLCPPVP--TGSIPN 724
Score = 105 (42.0 bits), Expect = 4.6e-29, Sum P(6) = 4.6e-29
Identities = 23/71 (32%), Positives = 35/71 (49%)
Query: 537 GEYVMRSLFADFTAQAEKKLDQVLAEPQEK--PLSKVLQRGEDPVFDQLLIAFGSVAEHC 594
GEY + LF F QA+ K++Q + + E P+ V G D FDQL+ A G +A
Sbjct: 227 GEYALHHLFNSFVGQADNKINQAIMKLGESDTPVEDVCGPGTDSKFDQLISALGHIARQK 286
Query: 595 LPSILRALFAW 605
++ + W
Sbjct: 287 PKPLIDTIMLW 297
Score = 90 (36.7 bits), Expect = 4.6e-29, Sum P(6) = 4.6e-29
Identities = 39/196 (19%), Positives = 85/196 (43%)
Query: 1856 LLSPLAEYVDGARLCLE---LEADKQILREIKAHFCNFVCKMIHSFP-LESRQTLLKRDL 1911
+++ L Y R+ L ++ D + + ++ H+C + ++ + + +
Sbjct: 1288 IVNNLVTYAKDLRIFLSDAGVQNDWEF-QSLRFHYCGLMEELFEGVNRTKDPSRWIPFEA 1346
Query: 1912 RRNLFSLFTSWAGQYGRNLNITQ--SYSVSMPNPPASNPGPE------ALKTSEEELQLT 1963
R++ FSL W G I+Q + + G E A + + L+
Sbjct: 1347 RKSSFSLMEDWCGYSPNQAQISQREEHMRKLAIAQRQEAGGELRGATAATEIEKRNLRAA 1406
Query: 1964 SLSAMSAVLTCGPVF---DPSTLLAED-GVLYPWLDMLLASSEEKTYQIGCQTVILLLEC 2019
+L AM++ L GP+ + ++L D G + W++++ + +K + IG + + L+
Sbjct: 1407 ALGAMAS-LCAGPISITTESGSVLQFDVGRMLSWIEIIFNTVSDKWHAIGRRALKNLILH 1465
Query: 2020 NPDMGPLLDWVVDRCY 2035
N + LL+ V+ CY
Sbjct: 1466 NKEHTYLLERSVEMCY 1481
Score = 77 (32.2 bits), Expect = 4.6e-29, Sum P(6) = 4.6e-29
Identities = 15/39 (38%), Positives = 25/39 (64%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEEL 1805
L+ ++PLL + +R+A+V ALG+IN + L+E L
Sbjct: 1190 LFAFVIPLLSAERASIRNAIVVALGSINKYLYRILLESL 1228
Score = 64 (27.6 bits), Expect = 4.2e-21, Sum P(6) = 4.2e-21
Identities = 16/55 (29%), Positives = 27/55 (49%)
Query: 960 ERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQSLQTL 1014
+R+ DL V A+PR + D L++LL T H+ L + +SL+ +
Sbjct: 828 QRQGFYDLLHVAVQALPRCLSDHTPFNSLINLLCTGTAHVQPHLAFSSAESLKAI 882
Score = 59 (25.8 bits), Expect = 1.8e-24, Sum P(6) = 1.8e-24
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 182 GEYVMRSLFADFTAQAEKKLDQVL 205
GEY + LF F QA+ K++Q +
Sbjct: 227 GEYALHHLFNSFVGQADNKINQAI 250
Score = 48 (22.0 bits), Expect = 4.6e-29, Sum P(6) = 4.6e-29
Identities = 14/48 (29%), Positives = 25/48 (52%)
Query: 1418 NLSNLTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLG 1465
+LS++ +QV +VE L LC+ R ++ +LR + + LG
Sbjct: 963 DLSSVL-AQV-EEVESHGLFFLCSQSRVVRSFAITVLRLITEFDSALG 1008
Score = 42 (19.8 bits), Expect = 2.2e-15, Sum P(6) = 2.2e-15
Identities = 14/89 (15%), Positives = 34/89 (38%)
Query: 934 EPPTSRSDVQCINHCTTEEPDEMITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLS 993
EP + D + D+++ ER+ + ++ C + + + VD+
Sbjct: 330 EPSQAAGDSGHSPNSLLSRHDDIVLTERRATVSVYLVCRVLI-EIFNQSSLESITVDMAD 388
Query: 994 RLTLHMDEELRALAYQSLQTLVIDFPDWR 1022
RL + +L+ + + + +WR
Sbjct: 389 RLEDIVFGQLKTVDPDQITASPLRMANWR 417
Score = 37 (18.1 bits), Expect = 5.8e-28, Sum P(6) = 5.8e-28
Identities = 8/35 (22%), Positives = 18/35 (51%)
Query: 1507 NVEQSSRLCTQELRNWIRPSEQPPWPSCSEHADQN 1541
++E + RL + L+ WI +Q + ++ + N
Sbjct: 919 HIESTLRLYVELLQIWIEEIKQKTKGTIADSGEMN 953
Score = 37 (18.1 bits), Expect = 4.8e-17, Sum P(5) = 4.8e-17
Identities = 9/36 (25%), Positives = 19/36 (52%)
Query: 1112 TLFPTIVPFLTTHSFTLISANSFICFPLAESLYRLL 1147
+LF ++P L+ ++ +A + + LYR+L
Sbjct: 1189 SLFAFVIPLLSAERASIRNAIVVALGSINKYLYRIL 1224
Score = 37 (18.1 bits), Expect = 6.3e-13, Sum P(4) = 6.3e-13
Identities = 9/20 (45%), Positives = 11/20 (55%)
Query: 1022 RHDVLAVFYFGTHDMTIDLQ 1041
RH+V AVFY +D Q
Sbjct: 2274 RHNVHAVFYTCAEVDRVDAQ 2293
>DICTYBASE|DDB_G0275305 [details] [associations]
symbol:DDB_G0275305 "unknown" species:44689
"Dictyostelium discoideum" [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR016024
dictyBase:DDB_G0275305 SUPFAM:SSF48371 EMBL:AAFI02000013
eggNOG:NOG282247 InterPro:IPR025614 InterPro:IPR025481 Pfam:PF14225
Pfam:PF14222 OMA:WAMECTS RefSeq:XP_643850.1
EnsemblProtists:DDB0233061 GeneID:8619900 KEGG:ddi:DDB_G0275305
InParanoid:Q553W1 ProtClustDB:CLSZ2430993 Uniprot:Q553W1
Length = 2868
Score = 179 (68.1 bits), Expect = 1.1e-28, Sum P(6) = 1.1e-28
Identities = 50/188 (26%), Positives = 97/188 (51%)
Query: 709 KEAETILQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQND 768
K+ ++ ER L V+++FC + +L L D + IE++ F+ FK + +
Sbjct: 160 KDTTPMIDERYKLIVDYIFCTTISSILNSLTKENLTDAMGIQIESMCFESFKLEKRLST- 218
Query: 769 PNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSIISLLMGMK 828
N++ + + DL A +LG L++ R +SV RF E + NT ++ S+L G++
Sbjct: 219 -NSSPM-IIPDLCASILGQLSKYRLRSVSSRFFKEFQSCL--SSNTLKNKTF-SILQGIR 273
Query: 829 FFRVKMVPIEEFEASFQFMQECAQYFTDVKDK-DVKHALAGLFVEILVPVAATVKNEVKF 887
F +VK+ + + S +F+ ++F + + K D++ A++ + IL P+ E KF
Sbjct: 274 FLKVKISSESKLKQSLEFINSYLEFFKNNRIKGDLRRAISEILASILRPLT-----EEKF 328
Query: 888 IPIVSSSQ 895
P +S ++
Sbjct: 329 KPELSYTE 336
Score = 164 (62.8 bits), Expect = 1.1e-28, Sum P(6) = 1.1e-28
Identities = 42/107 (39%), Positives = 60/107 (56%)
Query: 1138 PLA-ESLYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKG--SKAVVPRDTPLNIFVKI 1194
P A ES LL Y+ + E RL +V+ +FP G K + PL++FV I
Sbjct: 398 PYALESAQYLLECYLTKYS-EQPEEVYERLHQLVSHIFPTGHAKKLTMSASDPLDVFVDI 456
Query: 1195 IQFIAQERLDFAMREIVFDLLSVGRPIKLILT-PERMSIGLRAFLVV 1240
+ IA R+DFA +I+FDLL G P +L ++ ERM IGLRA +++
Sbjct: 457 VCVIASTRIDFAFEKIIFDLLRGGDPKELYISNSERMIIGLRAVMLI 503
Score = 132 (51.5 bits), Expect = 1.1e-28, Sum P(6) = 1.1e-28
Identities = 69/298 (23%), Positives = 125/298 (41%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINS---EALKDLMEELSVYIREA--VDRKTENMX 1821
L+ L+VP L+ ++ + AL NS E L D+++ L + A +KT+ +
Sbjct: 1069 LFNLIVPYLKSMDRFFAESTLTALEKTNSHVLEVLFDVLKPLENELHGARKTKKKTDVIK 1128
Query: 1822 XXXXXXXXXXXXXXVFELIAEHGTFGACSPTMPGLLSPLAEYV-DGARLCLELEADKQIL 1880
EL+ + + +L+ L V G E D L
Sbjct: 1129 SVIGIRRHCLESLKPGELVKRELLKKSYIDFIQEVLTFLNVNVPSGGESSNEYLWDN--L 1186
Query: 1881 REIKAHFCNFVCKMIHSFPLESRQTLLKRDLRRNLFSLFTSWAG--QYGRNLNITQSYS- 1937
I+ +FC V +++ Q L R LRR+LF F W+ + R I++ +
Sbjct: 1187 HYIRFNFCAMVHRIVQQL-YSGGQEFLDRSLRRDLFRAFNKWSESEELIREETISKKLTA 1245
Query: 1938 -VSMPNPPASNPGPEALKTSEEELQLTSLSAMS-AVLTCGPVFDPSTLLAEDGVLYPWLD 1995
+ AS ++ E QL+ +++ + +V+ GP F T +GV++ W++
Sbjct: 1246 FLQQEEKEASKRKEAEIRIYEHASQLSHVASHALSVILLGPFFI-ETFKDPNGVVFQWIN 1304
Query: 1996 MLLASSEEKTYQIGCQTVIL-LLECNPDMGPLLDWVVDRCYTASVQVADGCFLALATL 2052
+ S + + +T + L+ N L+ V++CY+ + VA G FL+L L
Sbjct: 1305 QMFCSGIKTKLRAITRTGLQNFLKHNLSHQELVYHCVNQCYSPNNAVAQGYFLSLVEL 1362
Score = 74 (31.1 bits), Expect = 1.1e-28, Sum P(6) = 1.1e-28
Identities = 22/83 (26%), Positives = 36/83 (43%)
Query: 530 SSNNVR---PGEYVMRSLFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIA 586
SSN + P +++M L DF + K+D + + + K + E F Q+L
Sbjct: 59 SSNQIARVLPADHIMFKLLGDFKEHTKVKIDIFIRDDKIK-IEDFFDGPESKTFHQVLEG 117
Query: 587 FGSVAEHCLPSILRALFAWYERQ 609
V+++ L I AL W Q
Sbjct: 118 LTEVSKYFLNLIASALLNWRSTQ 140
Score = 71 (30.1 bits), Expect = 2.0e-19, Sum P(6) = 2.0e-19
Identities = 19/80 (23%), Positives = 38/80 (47%)
Query: 950 TEEPDEMITGERKPR---IDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRAL 1006
T+ E++ R P ++L + ++ +P P + +LV +LS+ +H+D +
Sbjct: 597 TKPLSELLEKMRPPGYSCLELLKIAISVIPIAFPTKIIPQDLVVMLSKFLIHLDRGVSEK 656
Query: 1007 AYQSLQTLVIDFPDWRHDVL 1026
A L L+ PD R ++
Sbjct: 657 ASIVLTQLMASRPDIRPQII 676
Score = 51 (23.0 bits), Expect = 2.3e-26, Sum P(6) = 2.3e-26
Identities = 9/34 (26%), Positives = 19/34 (55%)
Query: 179 VRPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQI 212
V P +++M L DF + K+D + + +++I
Sbjct: 66 VLPADHIMFKLLGDFKEHTKVKIDIFIRDDKIKI 99
Score = 47 (21.6 bits), Expect = 1.1e-28, Sum P(6) = 1.1e-28
Identities = 10/31 (32%), Positives = 18/31 (58%)
Query: 1431 VEGFALVMLCNVRLTPRRLSVHILREVKMLN 1461
VE AL LC+ R+L + IL +++++
Sbjct: 743 VEAVALTFLCSSNGKNRKLCLQILDSIRLVH 773
Score = 46 (21.3 bits), Expect = 1.1e-28, Sum P(6) = 1.1e-28
Identities = 11/49 (22%), Positives = 20/49 (40%)
Query: 1615 WGFCLFQFLQKGRVLTYCPSAVAQAWPIVYSRLHTLFPTIGKKTSYCAL 1663
W CL ++ L CP +++ +V R+ + P +K L
Sbjct: 974 WSCCLADIIKASCEL--CPRTISKTTDLVLQRIKPIQPDESQKAQSITL 1020
Score = 42 (19.8 bits), Expect = 6.9e-20, Sum P(5) = 6.9e-20
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 1597 NRNGSV--LNLSPSCSAP 1612
N NG V +N SPS S+P
Sbjct: 2825 NSNGGVYPINTSPSFSSP 2842
Score = 42 (19.8 bits), Expect = 7.6e-11, Sum P(4) = 7.6e-11
Identities = 10/18 (55%), Positives = 12/18 (66%)
Query: 1060 NRNGSV--LNLSPSCSAP 1075
N NG V +N SPS S+P
Sbjct: 2825 NSNGGVYPINTSPSFSSP 2842
Score = 42 (19.8 bits), Expect = 0.00089, Sum P(5) = 0.00089
Identities = 12/44 (27%), Positives = 22/44 (50%)
Query: 767 NDPNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKELRFK 810
+D + I V + E+L + A+ + + EL+E+RFK
Sbjct: 687 SDKQSNLISIVLEKKRELLELWAKFKTNKFSLQTNDELEEIRFK 730
Score = 41 (19.5 bits), Expect = 9.3e-09, Sum P(3) = 9.3e-09
Identities = 15/66 (22%), Positives = 28/66 (42%)
Query: 1954 KTSEEELQLTSLSAMSAVLTCGPVFDPSTLLAEDGVLYPWLDMLLASSEEKTYQIGCQTV 2013
KT + + LTS +S +L C D + L + + +D + ++ ++
Sbjct: 351 KTKKTKDVLTSFPLLSILLCC---LDKESFLKQ---FWGLMDSFIKCKDKAIRPYALESA 404
Query: 2014 ILLLEC 2019
LLEC
Sbjct: 405 QYLLEC 410
Score = 39 (18.8 bits), Expect = 2.7e-16, Sum P(6) = 2.7e-16
Identities = 13/28 (46%), Positives = 16/28 (57%)
Query: 1106 VYSRLHTLFPTIVPFLTTHSFTL-ISAN 1132
VY RLH L I P T H+ L +SA+
Sbjct: 422 VYERLHQLVSHIFP--TGHAKKLTMSAS 447
Score = 39 (18.8 bits), Expect = 6.4e-10, Sum P(5) = 6.4e-10
Identities = 15/53 (28%), Positives = 27/53 (50%)
Query: 1200 QERLDFAMREIVFDLLSVGRPIKLILTPERMSIGLRAFLVVAD--SLQQKEGE 1250
QE LD ++R +F + + ++ E +S L AFL + + ++KE E
Sbjct: 1209 QEFLDRSLRRDLFRAFNKWSESEELIREETISKKLTAFLQQEEKEASKRKEAE 1261
Score = 38 (18.4 bits), Expect = 7.1e-28, Sum P(6) = 7.1e-28
Identities = 6/11 (54%), Positives = 8/11 (72%)
Query: 1740 NVGGERGGAGV 1750
N+GG GG G+
Sbjct: 893 NIGGGGGGGGI 903
Score = 38 (18.4 bits), Expect = 8.0e-10, Sum P(5) = 8.0e-10
Identities = 7/28 (25%), Positives = 17/28 (60%)
Query: 1201 ERLDFAMREIVFDLLSVGRPIKLILTPE 1228
E+++F+ + +FD+ + G + +T E
Sbjct: 2553 EQIEFSQEKDLFDVFTAGSQLIHQITSE 2580
Score = 37 (18.1 bits), Expect = 1.1e-27, Sum P(6) = 1.1e-27
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 1323 YLESVGHPLRASSNDDIHSECKQVL 1347
Y+E+V SSN C Q+L
Sbjct: 742 YVEAVALTFLCSSNGKNRKLCLQIL 766
Score = 37 (18.1 bits), Expect = 2.4e-08, Sum P(3) = 2.4e-08
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 1870 CLELEADKQILREIKAHFCNFV-CK--MIHSFPLESRQTLLK 1908
CL+ E+ L++ +F+ CK I + LES Q LL+
Sbjct: 371 CLDKES---FLKQFWGLMDSFIKCKDKAIRPYALESAQYLLE 409
>UNIPROTKB|B4DU17 [details] [associations]
symbol:MED6 "Mediator of RNA polymerase II transcription
subunit 6" species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase
II transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 EMBL:AL357153
GO:GO:0016592 GO:GO:0001104 HOGENOM:HOG000035127 PANTHER:PTHR13104
HOVERGEN:HBG006825 OMA:RVDMLLA UniGene:Hs.497353 HGNC:HGNC:19970
EMBL:AK300460 IPI:IPI00102495 SMR:B4DU17 STRING:B4DU17
Ensembl:ENST00000430055 UCSC:uc010tth.2 Uniprot:B4DU17
Length = 253
Score = 328 (120.5 bits), Expect = 5.6e-28, P = 5.6e-28
Identities = 72/127 (56%), Positives = 90/127 (70%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRL-------LST 290
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+ L+
Sbjct: 70 LLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVSLFSFYKLTA 129
Query: 291 VHHLQSAFEEVNSLSKYNPNKGYSWDSKMLPQGKDTVK-KEIIKEEPSSIFQRQRVDMLL 349
VH +QSAF+E S +Y+P+KGY W K + +D V+ K KEEPSSIFQRQRVD LL
Sbjct: 130 VHGIQSAFDEAMSYCRYHPSKGYWWHFKDHEE-QDKVRPKAKRKEEPSSIFQRQRVDALL 188
Query: 350 SELTRHF 356
+L + F
Sbjct: 189 LDLRQKF 195
>UNIPROTKB|B4E2P0 [details] [associations]
symbol:MED6 "cDNA FLJ59149, highly similar to RNA
polymerase transcriptional regulation mediator, subunit 6 homolog"
species:9606 "Homo sapiens" [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] InterPro:IPR007018 Pfam:PF04934
EMBL:AL357153 GO:GO:0016592 GO:GO:0001104 HOGENOM:HOG000035127
PANTHER:PTHR13104 HOVERGEN:HBG006825 UniGene:Hs.497353
HGNC:HGNC:19970 EMBL:AK304361 IPI:IPI00909716 SMR:B4E2P0
STRING:B4E2P0 Ensembl:ENST00000440435 UCSC:uc010tti.2
Uniprot:B4E2P0
Length = 181
Score = 276 (102.2 bits), Expect = 1.9e-22, P = 1.9e-22
Identities = 51/81 (62%), Positives = 64/81 (79%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
+LH QEPIL++IRKQ R S Q P+ADYYIIAGV+YQAPDL SVI+SR+L+ VH +QSA
Sbjct: 70 LLHAQEPILFIIRKQQRQSPAQVIPLADYYIIAGVIYQAPDLGSVINSRVLTAVHGIQSA 129
Query: 298 FEEVNSLSKYNPNKGYSWDSK 318
F+E S +Y+P+KGY W K
Sbjct: 130 FDEAMSYCRYHPSKGYWWHFK 150
>WB|WBGene00003164 [details] [associations]
symbol:mdt-6 species:6239 "Caenorhabditis elegans"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0007281 "germ cell development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0048477 "oogenesis"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 GO:GO:0009792
GO:GO:0040007 GO:GO:0008406 GO:GO:0002119 GO:GO:0048477
GO:GO:0007283 GO:GO:0040035 GO:GO:0007281 GO:GO:0040027
GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097 KO:K15128
PANTHER:PTHR13104 GeneTree:ENSGT00390000017666 EMBL:FO081184
EMBL:U78081 PIR:T37473 RefSeq:NP_504791.3 ProteinModelPortal:Q9N337
IntAct:Q9N337 STRING:Q9N337 PaxDb:Q9N337 EnsemblMetazoa:Y57E12AL.5
GeneID:179091 KEGG:cel:CELE_Y57E12AL.5 UCSC:Y57E12AL.5 CTD:179091
WormBase:Y57E12AL.5 HOGENOM:HOG000113546 InParanoid:Q9N337
OMA:IAYYYVI NextBio:903880 Uniprot:Q9N337
Length = 250
Score = 231 (86.4 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 52/121 (42%), Positives = 78/121 (64%)
Query: 237 WVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQS 296
+VL +P L++I KQ R+++ +PIA YY+I G V+QAPD+ S++ SRLL + L++
Sbjct: 79 YVLWYSQPPLFIICKQRRNNVTNVSPIAYYYVINGSVHQAPDMYSLVQSRLLGALEPLRN 138
Query: 297 AFEEVNSLSKYNPNKGYSWDSKMLPQGK--DTVKKEIIKE---EPSSIFQRQRVDMLLSE 351
AF EV + S+YN KGY W+ K P K + KKE +E + S+ FQ+ R MLL++
Sbjct: 139 AFGEVTNYSRYNTAKGYYWEFKNKPNVKKREEEKKEDEEEKLEDRSTNFQKTRTMMLLNQ 198
Query: 352 L 352
L
Sbjct: 199 L 199
Score = 41 (19.5 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 913 DPLRASSNDDIHSECKQGLGLEPPTSRSD 941
D L +++ E ++ L E PT+ +D
Sbjct: 207 DALEREEKEEVEEEEEETLKTEEPTTSTD 235
>UNIPROTKB|Q9N337 [details] [associations]
symbol:mdt-6 "Mediator of RNA polymerase II transcription
subunit 6" species:6239 "Caenorhabditis elegans" [GO:0005515
"protein binding" evidence=IPI] InterPro:IPR007018
InterPro:IPR016820 Pfam:PF04934 PIRSF:PIRSF023869 GO:GO:0009792
GO:GO:0040007 GO:GO:0008406 GO:GO:0002119 GO:GO:0048477
GO:GO:0007283 GO:GO:0040035 GO:GO:0007281 GO:GO:0040027
GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097 KO:K15128
PANTHER:PTHR13104 GeneTree:ENSGT00390000017666 EMBL:FO081184
EMBL:U78081 PIR:T37473 RefSeq:NP_504791.3 ProteinModelPortal:Q9N337
IntAct:Q9N337 STRING:Q9N337 PaxDb:Q9N337 EnsemblMetazoa:Y57E12AL.5
GeneID:179091 KEGG:cel:CELE_Y57E12AL.5 UCSC:Y57E12AL.5 CTD:179091
WormBase:Y57E12AL.5 HOGENOM:HOG000113546 InParanoid:Q9N337
OMA:IAYYYVI NextBio:903880 Uniprot:Q9N337
Length = 250
Score = 231 (86.4 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 52/121 (42%), Positives = 78/121 (64%)
Query: 237 WVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQS 296
+VL +P L++I KQ R+++ +PIA YY+I G V+QAPD+ S++ SRLL + L++
Sbjct: 79 YVLWYSQPPLFIICKQRRNNVTNVSPIAYYYVINGSVHQAPDMYSLVQSRLLGALEPLRN 138
Query: 297 AFEEVNSLSKYNPNKGYSWDSKMLPQGK--DTVKKEIIKE---EPSSIFQRQRVDMLLSE 351
AF EV + S+YN KGY W+ K P K + KKE +E + S+ FQ+ R MLL++
Sbjct: 139 AFGEVTNYSRYNTAKGYYWEFKNKPNVKKREEEKKEDEEEKLEDRSTNFQKTRTMMLLNQ 198
Query: 352 L 352
L
Sbjct: 199 L 199
Score = 41 (19.5 bits), Expect = 7.5e-19, Sum P(2) = 7.5e-19
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 913 DPLRASSNDDIHSECKQGLGLEPPTSRSD 941
D L +++ E ++ L E PT+ +D
Sbjct: 207 DALEREEKEEVEEEEEETLKTEEPTTSTD 235
>SGD|S000001391 [details] [associations]
symbol:TAO3 "Component of the RAM signaling network"
species:4932 "Saccharomyces cerevisiae" [GO:0007118 "budding cell
apical bud growth" evidence=IGI;IMP] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0043332 "mating projection tip" evidence=IDA]
[GO:0000902 "cell morphogenesis" evidence=IGI;IMP] [GO:0005933
"cellular bud" evidence=IDA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0000131 "incipient cellular bud site"
evidence=IDA] [GO:0007114 "cell budding" evidence=IGI;IMP]
InterPro:IPR016024 SGD:S000001391 GO:GO:0005739 SUPFAM:SSF48371
GO:GO:0043332 EMBL:BK006942 GO:GO:0000902 EMBL:Z38059 GO:GO:0005933
KO:K06123 RefSeq:NP_012142.3 GeneID:854682 KEGG:sce:YIL124W
GO:GO:0000131 GO:GO:0007118 RefSeq:NP_012137.3 GeneID:854677
KEGG:sce:YIL129C eggNOG:NOG282247 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222
GeneTree:ENSGT00610000086058 OrthoDB:EOG4GJ2XP EMBL:DQ116812
EMBL:DQ116814 EMBL:DQ116817 EMBL:DQ116824 PIR:S48405
ProteinModelPortal:P40468 DIP:DIP-5950N IntAct:P40468
MINT:MINT-661212 STRING:P40468 PaxDb:P40468 EnsemblFungi:YIL129C
CYGD:YIL129c HOGENOM:HOG000093831 OMA:VEGNGLF NextBio:977277
ArrayExpress:P40468 Genevestigator:P40468 GermOnline:YIL129C
Uniprot:P40468
Length = 2376
Score = 186 (70.5 bits), Expect = 5.4e-18, Sum P(6) = 5.4e-18
Identities = 59/246 (23%), Positives = 124/246 (50%)
Query: 709 KEAETILQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQND 768
KE E L +R+ L ++ C +L E++KQ + D L +E + F K + +
Sbjct: 341 KE-EAFLADRKSLISIYILCRVLNEIVKQASSNEEED-LSDKLEEIVFTQLKTTDPLSIS 398
Query: 769 PNATNIHTVADLYAEVLGVLAQSRFQSVRKRFMSELKEL-RFKEPNTHTTQSIISLLMGM 827
+ + +AE+LG +++ +F SV RF+++L+++ + P + + L++GM
Sbjct: 399 TSLIKSSNW-NSFAELLGSMSEKKFLSVSDRFIADLEKIPAYIPPELEPSTHL--LILGM 455
Query: 828 KFFRVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVK- 886
++ +++ P+E+FE S FM+ +++F ++ V A A + ++L+P+A ++ EV
Sbjct: 456 RYLKLRNYPLEKFEESADFMKSLSKFFAKTENFPVCLAYAEVTNQLLLPLAGSLTAEVNH 515
Query: 887 --FIPIVSSSQGKRRRVRGSESITLG---LIDPLRASSNDDIHSECKQGLGL-EPPTSRS 940
++ +S+ +R++ + L + +S D+ S KQ L L E S+
Sbjct: 516 PTWVEAMSTLLNTAKRLQADSKYWVSGFKLTVSILCASPPDLFS--KQWLSLLEANASKV 573
Query: 941 DVQCIN 946
+ +N
Sbjct: 574 KSKSLN 579
Score = 110 (43.8 bits), Expect = 5.4e-18, Sum P(6) = 5.4e-18
Identities = 23/72 (31%), Positives = 38/72 (52%)
Query: 536 PGEYVMRSLFADFTAQAEKKLDQVLAEPQ--EKPLSKVLQRGEDPVFDQLLIAFGSVAEH 593
P EY + LF F AE KL+ L + E P+ ++L G DP FD+++ + G +A+
Sbjct: 161 PSEYALHILFTKFIRYAENKLNMCLQQLDMAEPPIVEILGEGVDPSFDEIIKSLGHIAKK 220
Query: 594 CLPSILRALFAW 605
++ A+ W
Sbjct: 221 KPKPVIDAMMFW 232
Score = 87 (35.7 bits), Expect = 5.4e-18, Sum P(6) = 5.4e-18
Identities = 59/286 (20%), Positives = 115/286 (40%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTENMXXXXXX 1826
++K+++PLL +RDA++ L ++N K +E + V++ + + N
Sbjct: 1161 IFKMVLPLLNAKYIMIRDAIITGLSSMNINIFKAYVEAIDVFLVAWKEGSSNNQIRVEMF 1220
Query: 1827 XXXXXXXXXVFELIAEHGTFGACSPTMPGLLSPLAEYVDGARLCLELEADKQILREIKAH 1886
+ + + + +L L+E++ + LE ++ QI E ++
Sbjct: 1221 HILTILSPYLKSDMIFNDEW---------ILRKLSEFLQKTKQFLEKDS-VQISYEYQS- 1269
Query: 1887 FCNFVCKMIHSFPLESRQTLLKRDL-----RRNLFSLFTSWAGQYGRNLNITQS-YSVSM 1940
++ +I S+ + R+ L +L R + F+ W G YG I++ Y++ +
Sbjct: 1270 LRSYFAGLILSYYMAVREHPLIDELFPFQARASCFNFLKEWCG-YGEYEPISEERYAIMI 1328
Query: 1941 PNPPASNPGPEALKTSEE----ELQLTSLSAMSAVLTCGPV---FD-----PSTLLAEDG 1988
N S A+ T E LQ+ L M VL P+ D P + +
Sbjct: 1329 KNTE-SGRDRTAITTGIEFQKNRLQMIVLETM-VVLCSDPITQTLDDDLELPIVISFDTE 1386
Query: 1989 VLYPWLDMLLASSEEKTYQIGCQTVILLLECNPDMGPLLDWVVDRC 2034
L W++ L S +G + + LL+ N + L V +C
Sbjct: 1387 DLLAWIEALFDSDNTTVKNLGVRALENLLDKNRENFKLFRDVAFQC 1432
Score = 58 (25.5 bits), Expect = 5.4e-18, Sum P(6) = 5.4e-18
Identities = 36/147 (24%), Positives = 59/147 (40%)
Query: 1427 VFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGLGLEPPT---SRSDVQ-CIDH 1482
V +VEG L LC+ RRL + ILR + ++ + E + SRS D
Sbjct: 933 VIEEVEGNGLFFLCSHDAKIRRLGIQILRIIFKFDEAMMEKTEKLSNGHSRSSSHFAADR 992
Query: 1483 CTT--DVM-QCKTHTSETQCSYPTRGENVEQSSRLCTQELRNWI---RPSEQPPWPSCSE 1536
T D++ +C T T + SRL ++ R + SE + +
Sbjct: 993 GTRLIDLLNECNTTTLINPHKATLSAVEKTRFSRLNSKYKRGLLIKLAESEYGVDAALWQ 1052
Query: 1537 HADQNVIDVIDKACPDILDQCMSQLTC 1563
A ++ ++ K CP + C S + C
Sbjct: 1053 RAFPKLLALVFKTCPMAMALCRS-IVC 1078
Score = 56 (24.8 bits), Expect = 9.5e-13, Sum P(6) = 9.5e-13
Identities = 17/43 (39%), Positives = 22/43 (51%)
Query: 181 PGEYVMRSLFADFTAQAEKKLDQVL-----AEPQ-VQIISKYV 217
P EY + LF F AE KL+ L AEP V+I+ + V
Sbjct: 161 PSEYALHILFTKFIRYAENKLNMCLQQLDMAEPPIVEILGEGV 203
Score = 51 (23.0 bits), Expect = 5.4e-18, Sum P(6) = 5.4e-18
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 1130 SANSFICFPLAESLYRLLWVYMIRIKCESNSATQS 1164
S N I F A L RL+WVY+ R N+ T++
Sbjct: 577 SLNERIIF--AVGLSRLVWVYLYRCPETLNNTTRT 609
Score = 51 (23.0 bits), Expect = 6.8e-05, Sum P(6) = 6.8e-05
Identities = 27/126 (21%), Positives = 52/126 (41%)
Query: 896 GKRRRVRGSESITLGLIDPLRASSNDDIHSECKQGLGLEPPTSRSDVQCINHCTTEEPDE 955
G +R V S + + LI +SSN+ S P + S ++ + + +E
Sbjct: 294 GMKRHVSSSFNNKVPLIKA--SSSNNSATSS--------PSIANSQLKSLENTIEVAKEE 343
Query: 956 MITGERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQSLQTLV 1015
+RK I ++ C + ++ A + E DL +L + +L+ S+ T +
Sbjct: 344 AFLADRKSLISIYILC-RVLNEIVKQASSNEE-EDLSDKLEEIVFTQLKTTDPLSISTSL 401
Query: 1016 IDFPDW 1021
I +W
Sbjct: 402 IKSSNW 407
Score = 50 (22.7 bits), Expect = 0.00034, Sum P(5) = 0.00034
Identities = 28/116 (24%), Positives = 53/116 (45%)
Query: 1149 VYMIRIKCESNSATQS------RLQSIVNSL-FPKGSKAVVPRDTPLNIFV--KIIQFIA 1199
V +I+ +NSAT S +L+S+ N++ K + R + ++I++ +++ I
Sbjct: 307 VPLIKASSSNNSATSSPSIANSQLKSLENTIEVAKEEAFLADRKSLISIYILCRVLNEIV 366
Query: 1200 -------QERLDFAMREIVFDLLSVGRPIKLILTPERMSIGLRAFLVVADSLQQKE 1248
+E L + EIVF L P+ I T S +F + S+ +K+
Sbjct: 367 KQASSNEEEDLSDKLEEIVFTQLKTTDPLS-ISTSLIKSSNWNSFAELLGSMSEKK 421
Score = 38 (18.4 bits), Expect = 1.1e-11, Sum P(4) = 1.1e-11
Identities = 8/22 (36%), Positives = 13/22 (59%)
Query: 954 DEMITGERKPRIDLFRTCVAAV 975
D +ITG I++F+ V A+
Sbjct: 1178 DAIITGLSSMNINIFKAYVEAI 1199
Score = 37 (18.1 bits), Expect = 5.4e-18, Sum P(6) = 5.4e-18
Identities = 9/21 (42%), Positives = 12/21 (57%)
Query: 1405 NAHLVFGHAHSNSNLSNLTRS 1425
NA FG + SN N S+ +S
Sbjct: 760 NAFSPFGFSFSNDNDSSKNKS 780
Score = 37 (18.1 bits), Expect = 5.5e-13, Sum P(4) = 5.5e-13
Identities = 10/38 (26%), Positives = 19/38 (50%)
Query: 1260 LPSGNTLRVKKTYLNKVSKTYLILLLFYRFDGGNCNNR 1297
+P G + + T LN + Y++ L + F+ NN+
Sbjct: 1651 IPGG--IGLLDTLLNNLEPKYMVPLAKHTFNEPMNNNK 1686
>POMBASE|SPBP19A11.04c [details] [associations]
symbol:mor2 "morphogenesis protein Mor2" species:4896
"Schizosaccharomyces pombe" [GO:0000078 "cell shape checkpoint"
evidence=NAS] [GO:0000920 "cytokinetic cell separation"
evidence=IGI] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0016020 "membrane"
evidence=IEA] [GO:0030037 "actin filament reorganization involved
in cell cycle" evidence=IMP] [GO:0030427 "site of polarized growth"
evidence=IDA] [GO:0032153 "cell division site" evidence=IDA]
[GO:0043234 "protein complex" evidence=NAS] [GO:0051286 "cell tip"
evidence=IDA] [GO:2000769 "regulation of establishment or
maintenance of cell polarity regulating cell shape"
evidence=IGI;IMP] InterPro:IPR016024 PomBase:SPBP19A11.04c
GO:GO:0005737 GO:GO:0043234 SUPFAM:SSF48371 GO:GO:0016020
GO:GO:2000769 GO:GO:0000078 GO:GO:0032153 GO:GO:0051286
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0000920 GO:GO:0030037
GO:GO:0030427 eggNOG:NOG282247 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222 EMBL:AB093007
RefSeq:NP_596172.1 STRING:Q9HDV6 EnsemblFungi:SPBP19A11.04c.1
GeneID:2541317 KEGG:spo:SPBP19A11.04c OMA:WAMECTS OrthoDB:EOG4GJ2XP
NextBio:20802427 Uniprot:Q9HDV6
Length = 2196
Score = 131 (51.2 bits), Expect = 3.0e-12, Sum P(5) = 3.0e-12
Identities = 39/179 (21%), Positives = 86/179 (48%)
Query: 714 ILQERRDLAVEFVFCLILIEVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQNDPNATN 773
++ ERR ++ C +L E+ + +P + ++ V+ + F +N P +++
Sbjct: 125 VVNERRSSISIYILCRVLTEIAETIPSNALEESTVSCLLECVFHQLL---SAKNLPVSSS 181
Query: 774 IHTVA--DLYAEVLGVLAQSRFQSVRKRFMSELKELRFKEPNTHTTQSI-ISLLMGMKFF 830
++A + +A ++G +++ F V RF+ E++ L ++ +++ + LL M++
Sbjct: 182 YFSLANWESFAFLVGSMSRFNFVMVSDRFIEEIEHLEKSGCDSRQKETVLVHLLRAMRYL 241
Query: 831 RVKMVPIEEFEASFQFMQECAQYFTDVKDKDVKHALAGLFVEILVPVAATVKNEVKFIP 889
R+++ P E S F+Q +F +K A L ++L P+ + EV IP
Sbjct: 242 RLQLYPTTLLEESIAFLQSLTSFFMKANTA-LKIEYAYLMEQLLRPLISRATFEVN-IP 298
Score = 82 (33.9 bits), Expect = 3.0e-12, Sum P(5) = 3.0e-12
Identities = 76/387 (19%), Positives = 152/387 (39%)
Query: 1143 LYRLLWVYMIRIKCESNSATQSRLQSIVNSLFPKGSK-AVVPRDT--PLNIFVKIIQFIA 1199
L R++W Y + K E S S + +I+ S F G K +VVP T L+ + +I++ +
Sbjct: 368 LSRVVWTYSNQYK-EEPSIMNSNISNILKSGFSIGKKFSVVPFATLEELDGYAQIVRVVG 426
Query: 1200 QERLDFAMREIVFDLLSVGRPIKLILTPERMSIGLRAFLVVADSLQQKEGEPPM-PRTSG 1258
+ ++EI+ L S + I PE++ I +R+ + ++ K+ + +
Sbjct: 427 AHFPELVIKEILTPL-STDAFTENI-GPEKLMIVVRSVYYILHDMKYKKSDSTIFEYIEF 484
Query: 1259 VLPSGNTLRVK---KTYLNKVSKTYLILLLFYRFDGGNCNNRDVNRGHS-ALYRDV---- 1310
+ + V + +++ +S+ L+ L+F NC N ALY +
Sbjct: 485 EFVDLHEVAVGTPLQQFVHNLSQK-LLFLVFQLSTNTNCYLDSKNATSLLALYINALKVF 543
Query: 1311 -CVLPSCETRVC-RYLESVGHPLRASSNDDIHSECKQVLGHXXXXXXXXXXXXXXXXXXX 1368
C++ E RV Y++ + SN IH+ C H
Sbjct: 544 PCLMGKLEQRVIDAYVKCLN-----CSNKIIHTVC-----HNSLIYFSSGLKMSKSVISC 593
Query: 1369 DHAHLVLGHASLVLDNAHLVF----GHAHLVLGHASLVLDNAHLVFGHAHSNSNLS---- 1420
LV G + +L H V V+ + VL N +++ +++
Sbjct: 594 LSRKLVKG-SEYLLRTYHEVIRIWISQQEAVIEKRNSVLSNKSCASSESNTPASVKQDYD 652
Query: 1421 NLTRSQVFHQVEGFALVMLCNVRLTPRRLSVHILREVKMLNKVLGLGLEPPTSRSDVQCI 1480
++ + +++ ++ L + + R+ +V +L +VK LN + D+
Sbjct: 653 DIQSWTIIEEIQSLGVLHLSSPSVGIRKFAVALLNDVKQLNTEYLMLSSDKVEVGDIYS- 711
Query: 1481 DHCTTDVMQ-CKTHTSETQCSYPTRGE 1506
+ DV++ C + + PT E
Sbjct: 712 EPTIVDVLKDCDSSILSVESHLPTAAE 738
Score = 79 (32.9 bits), Expect = 3.0e-12, Sum P(5) = 3.0e-12
Identities = 16/43 (37%), Positives = 27/43 (62%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYI 1809
L+ +++PL+ + + +R+AVV A+G IN A L+ L YI
Sbjct: 888 LFSMVLPLIFTEFSPIREAVVFAIGCINVNAFPQLVRSLKPYI 930
Score = 69 (29.3 bits), Expect = 3.0e-12, Sum P(5) = 3.0e-12
Identities = 40/211 (18%), Positives = 88/211 (41%)
Query: 1857 LSPLAEYVDGARLCLE---LEADKQILREIKAHFCNFVCKMIHSFPLESRQTLLKRDLRR 1913
LS ++E++ + L ++AD++ L+ ++ +F + K++ L +L R
Sbjct: 987 LSVISEFLKDLKGFLSTPNVQADEKYLK-LRCYFSQLLEKVLLVQNLHPSSEVLPFSGRA 1045
Query: 1914 NLFSLFTSWAGQYGRNLNITQSYSVSMPNPPASNPGP--------EALKTSEEELQLTSL 1965
+ + L W G +G IT++ M N + + ++ L+ ++
Sbjct: 1046 SCWKLLDEWTG-FGPARAITKNREELMRAHIRGNNKDIRERDKLLASFEAGKQNLEYLAI 1104
Query: 1966 SAMSAVLTCG--PVFDPSTLLAEDGVLYPWLDMLLASSEEKTYQIGCQTVILLLECNPDM 2023
AM A+ T L + +L W + S + + + + LL N
Sbjct: 1105 KAMIALCTAKLQQELTEGVFLFDIEILLNWFTAVFGSPSKAIVGLARKGLTALLLENSSN 1164
Query: 2024 GPLLDWVVDRCYTASVQ--VADGCFLALATL 2052
LL V++RC++ + +++ FL+L+ +
Sbjct: 1165 EVLLQKVINRCFSKEISQTISNYYFLSLSEM 1195
Score = 63 (27.2 bits), Expect = 3.0e-12, Sum P(5) = 3.0e-12
Identities = 18/81 (22%), Positives = 40/81 (49%)
Query: 543 SLFADFTAQAEKKLDQVLAEPQEKPLSKVLQRGEDPVFDQLLIAFGSVAEHCLPSILRAL 602
S + + A K + V E+ +L++GED FD+ + A ++A +++ +L
Sbjct: 47 SFLSRYHANEGKNAEPVRFNVGEQEAILLLKKGEDNEFDRCIQALVALASSKPVAVIESL 106
Query: 603 FAWYERQMRPSVEAAAN-PHI 622
W R++R + +++ P +
Sbjct: 107 LCW--RKVRVDITSSSGTPRV 125
Score = 45 (20.9 bits), Expect = 6.6e-06, Sum P(5) = 6.6e-06
Identities = 15/59 (25%), Positives = 26/59 (44%)
Query: 1838 ELIAEHGTFGACSPTMPGLLSPLAEYVDGARLCLELEADKQILREIKAHFCNFVCKMIH 1896
++ + F P + SP+ E V A C+ + A Q++R +K + V K H
Sbjct: 881 KITSAESLFSMVLPLIFTEFSPIREAVVFAIGCINVNAFPQLVRSLKPYIS--VLKQDH 937
Score = 37 (18.1 bits), Expect = 3.8e-09, Sum P(5) = 3.8e-09
Identities = 8/30 (26%), Positives = 14/30 (46%)
Query: 1989 VLYPWLDMLLASSEEKTYQIGCQTVILLLE 2018
VL PWL L + + T ++L++
Sbjct: 1303 VLLPWLQNLELKMDVENKTFDSFTAVILID 1332
>TAIR|locus:2143216 [details] [associations]
symbol:AT5G15680 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] [GO:0008150
"biological_process" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0016020 "membrane" evidence=IDA] [GO:0006487
"protein N-linked glycosylation" evidence=RCA] InterPro:IPR016024
GO:GO:0005886 EMBL:CP002688 SUPFAM:SSF48371 InterPro:IPR025614
InterPro:IPR025481 Pfam:PF14225 Pfam:PF14222 OMA:WAMECTS
IPI:IPI00539329 RefSeq:NP_197072.3 UniGene:At.43593 PRIDE:F4KB73
EnsemblPlants:AT5G15680.1 GeneID:831422 KEGG:ath:AT5G15680
Uniprot:F4KB73
Length = 2153
Score = 142 (55.0 bits), Expect = 4.7e-10, Sum P(5) = 4.7e-10
Identities = 56/219 (25%), Positives = 100/219 (45%)
Query: 679 SGPSKILMLRPFRRVQEHTV--LHEQYFRLRTKEAETILQE----RRDLAVEFVFCLILI 732
S P+ +L + HT L E R R E+ + +R LAVE +FC I
Sbjct: 40 SDPAYEQVLDSLAMIARHTPVPLLEALLRWRESESPKGANDASTFQRKLAVECIFCSACI 99
Query: 733 EVLKQLPFHPGHDNLVTYIETVAFKHFKYREGIQND---PNATNIH-TVADLYAEVLGVL 788
++ P + L + +E F + + + P+ ++ + DL A++LG L
Sbjct: 100 RFVECCPQEGLTEKLWSGLENFVFDWLINADRVVSQVEYPSLVDLRGLLLDLVAQLLGAL 159
Query: 789 AQSRFQSVRKRFMSELKELRFKEPNTHTTQS-IISLLMGMKFFRVKMVPIEEFEASFQFM 847
++ RF SV +RF EL R +T +S +S++ GM++ ++ + AS F+
Sbjct: 160 SRIRFSSVTERFFMELNTRRI---DTSVARSETLSIINGMRYLKLGVKSEGGLNASASFV 216
Query: 848 QECAQYFTDV-KDK-DVKHALAGLFVEILVPVAATVKNE 884
+ D+ K K ++ HAL + IL P++ K++
Sbjct: 217 AKANPLIRDIHKRKSELYHALCNMLSNILAPLSDGGKSQ 255
Score = 82 (33.9 bits), Expect = 4.7e-10, Sum P(5) = 4.7e-10
Identities = 28/104 (26%), Positives = 47/104 (45%)
Query: 1141 ESLYRLLWVYM-IRIKCESNSATQSRLQSIVNSLFPKGSKAVVPRDTPLNIFVKIIQFIA 1199
+ L+R+L Y+ + + + L S+ + L K ++ +D + V+ IA
Sbjct: 335 DCLHRVLRFYLSVYASSQPPNRIWDYLDSVTSQLLTVLRKGMLTQDVQQDKLVEFCVTIA 394
Query: 1200 QERLDFAMREIVFDLLSVGRPIKLILTPERMSIGLRAFLVVADS 1243
+ LDFAM ++ +LL P E IGLRA L + S
Sbjct: 395 EHNLDFAMNHMLLELLKQDSP------SEAKIIGLRALLALVMS 432
Score = 71 (30.1 bits), Expect = 4.7e-10, Sum P(5) = 4.7e-10
Identities = 56/252 (22%), Positives = 96/252 (38%)
Query: 1767 LYKLLVPLLRCDTTDVRDAVVHALGNINSEALKDLMEELSVYIREAVDRKTEN-----MX 1821
+Y L+ P LR + A ALG + EA + + EL+ ++ E + +TE +
Sbjct: 817 MYHLIFPYLRFGSETHNHAATMALGRSHLEACEIMFSELASFMEE-ISSETETKPKWKIQ 875
Query: 1822 XXXXXXXXXXXXXXVFELIAEHGTFGACSPTMPGLLSPLAEYVDGAR-LCL---ELEADK 1877
++ ++E+ G + L L D R + L E D
Sbjct: 876 KGGRREDLRVHVSNIYRTVSENVWPGMLARKPVFRLHYLRFIEDSTRQISLAPHESFQDM 935
Query: 1878 QILREIKAHFCNFVCKMIHSFPLESRQTLLKRDLRRNLFSLFTSWA-------GQYGRN- 1929
Q LR A F+ F +ES+ R+ LF L SW+ GQ G +
Sbjct: 936 QPLRYALASVLRFLAP---EF-VESKSEKFDVRSRKRLFDLLLSWSDDTGNTWGQDGVSD 991
Query: 1930 -LNITQSYSVSMPNPPASNPGPEAL-KTSEEELQLTSLSAMSAV--LTCGPVFDPSTLLA 1985
+ Y S N + + K E+++ ++++A+ L GP FD +
Sbjct: 992 YRREVERYKTSQHNRSKDSVDKISFDKELNEQIEAIQWASLNAMASLLYGPCFDDNARKM 1051
Query: 1986 EDGVLYPWLDML 1997
V+ W++ L
Sbjct: 1052 SGRVI-SWINSL 1062
Score = 60 (26.2 bits), Expect = 4.7e-10, Sum P(5) = 4.7e-10
Identities = 14/38 (36%), Positives = 21/38 (55%)
Query: 2016 LLECNPDMGPLLDWVVDRCYTASVQVADGCFLALATLF 2053
LL N D+ P +D+CY + +ADG F LA ++
Sbjct: 1118 LLLTNLDLFPAC---IDQCYYSDAAIADGYFSVLAEVY 1152
Score = 57 (25.1 bits), Expect = 1.1e-07, Sum P(5) = 1.1e-07
Identities = 15/67 (22%), Positives = 33/67 (49%)
Query: 960 ERKPRIDLFRTCVAAVPRLIPDAMTGGELVDLLSRLTLHMDEELRALAYQSLQTLVIDFP 1019
+ K + LF++ + +P LI + ++ +++ + + +D +R A Q L +V P
Sbjct: 487 KEKSQGSLFQSVLKCIPYLIEEVGRSDKITEIIPQHGISIDPGVRVEAVQVLNRIVRYLP 546
Query: 1020 DWRHDVL 1026
R V+
Sbjct: 547 HRRFAVM 553
Score = 52 (23.4 bits), Expect = 6.0e-07, Sum P(4) = 6.0e-07
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 1649 TLFPTIGKKTSYCALTYYFLLSSLTDPTPVSDNRASLLRSSAPPRKPVSERDSFLSLWRY 1708
TL P K L Y + ++++ P P+ A+ S PPR V+ +++ L L R
Sbjct: 2074 TLVPQTSFKARSGPLQYAMMAATMSQPFPLG---AAAAESGIPPRD-VALQNTRLMLGRV 2129
Query: 1709 L 1709
L
Sbjct: 2130 L 2130
Score = 46 (21.3 bits), Expect = 4.7e-10, Sum P(5) = 4.7e-10
Identities = 15/46 (32%), Positives = 21/46 (45%)
Query: 1515 CTQELRNWIRP---SEQPPWPSCSEHADQNVIDVIDKACPDILDQC 1557
C + LRN IR E P E +IDV+++ DI+ C
Sbjct: 655 CVRALRNDIRDLMIQEHPDHVMKFEAEPIYMIDVLEEHGDDIVQSC 700
Score = 37 (18.1 bits), Expect = 7.5e-07, Sum P(4) = 7.5e-07
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 1889 NFVCKMIHSFPLESRQTLLKRDLRRNLFSLFTSW 1922
NF+ K+ FPL L++ L R L L W
Sbjct: 558 NFILKLPDEFPL-----LIQASLGR-LLELMRFW 585
>CGD|CAL0005486 [details] [associations]
symbol:orf19.7420 species:5476 "Candida albicans" [GO:0070847
"core mediator complex" evidence=IEA] [GO:0016592 "mediator
complex" evidence=IEA] [GO:0001128 "RNA polymerase II transcription
coactivator activity involved in preinitiation complex assembly"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0051123 "RNA
polymerase II transcriptional preinitiation complex assembly"
evidence=IEA] InterPro:IPR007018 InterPro:IPR016612 Pfam:PF04934
PIRSF:PIRSF013286 CGD:CAL0005486 EMBL:AACQ01000074 GO:GO:0016592
GO:GO:0001104 eggNOG:COG5097 KO:K15128 PANTHER:PTHR13104
RefSeq:XP_716085.1 STRING:Q5A2Z1 GeneID:3642272 KEGG:cal:CaO19.7420
Uniprot:Q5A2Z1
Length = 263
Score = 163 (62.4 bits), Expect = 8.3e-09, P = 8.3e-09
Identities = 45/136 (33%), Positives = 72/136 (52%)
Query: 177 NNVRPGEYVMRSLFADFTAQAEKKLDQVLAEPQVQIISKYVFHTRTMSFAIFHTMLYLCL 236
NNV EY S F D T+ + + Q + Q+QI FH S M +
Sbjct: 23 NNVL--EYFSLSPFYDRTSNNQVLMMQFQYQ-QIQIPPGVSFHQYFQSR--LSEMTGIEF 77
Query: 237 WVLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQS 296
+ + +EP ++IRKQ R + T + DYYII VYQAP + V+SSRLL++V +++
Sbjct: 78 VIAYTKEPDFWIIRKQKRQDPQNTVTLQDYYIIGANVYQAPRIYDVLSSRLLASVLSIKN 137
Query: 297 AFEEVNSLSKYNPNKG 312
+ + +N ++ Y+ + G
Sbjct: 138 STDLLNDMTSYHISDG 153
>POMBASE|SPAC1002.15c [details] [associations]
symbol:pmc5 "mediator complex subunit Pmc5"
species:4896 "Schizosaccharomyces pombe" [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=IC] [GO:0016592 "mediator complex" evidence=IDA]
InterPro:IPR007018 InterPro:IPR016612 Pfam:PF04934
PIRSF:PIRSF013286 PomBase:SPAC1002.15c EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0006357 GO:GO:0016592 GO:GO:0001104
PDB:4H63 PDBsum:4H63 eggNOG:COG5097 KO:K15128 PANTHER:PTHR13104
RefSeq:NP_593503.1 PDB:4H61 PDBsum:4H61 IntAct:Q9US45 STRING:Q9US45
EnsemblFungi:SPAC1002.15c.1 GeneID:2543263 KEGG:spo:SPAC1002.15c
HOGENOM:HOG000093949 OMA:NEPADEN OrthoDB:EOG4VX5FP NextBio:20804284
Uniprot:Q9US45
Length = 216
Score = 142 (55.0 bits), Expect = 7.8e-07, P = 7.8e-07
Identities = 22/78 (28%), Positives = 49/78 (62%)
Query: 238 VLHVQEPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSA 297
++H + P L+VI+KQ+R + + P+ Y++ +Y AP+ +++++R+L+ + Q A
Sbjct: 80 IIHERPPFLWVIQKQNRLNENEVKPLTVYFVCNENIYMAPNAYTLLATRMLNATYCFQKA 139
Query: 298 FEEVNSLSKYNPNKGYSW 315
++ +YNP +GY++
Sbjct: 140 LTKIEKFPQYNPQEGYTY 157
>SGD|S000001100 [details] [associations]
symbol:MED6 "Subunit of the RNA polymerase II mediator
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016592
"mediator complex" evidence=IEA] [GO:0070847 "core mediator
complex" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0001128 "RNA polymerase II transcription coactivator activity
involved in preinitiation complex assembly" evidence=IDA]
[GO:0051123 "RNA polymerase II transcriptional preinitiation
complex assembly" evidence=IDA] [GO:0001104 "RNA polymerase II
transcription cofactor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR007018 InterPro:IPR016612 Pfam:PF04934
PIRSF:PIRSF013286 SGD:S000001100 EMBL:BK006934 GO:GO:0016592
EMBL:U00061 GO:GO:0001128 GO:GO:0070847 PDB:3RJ1 PDB:4GWP PDB:4GWQ
PDBsum:3RJ1 PDBsum:4GWP PDBsum:4GWQ eggNOG:COG5097 KO:K15128
PANTHER:PTHR13104 GeneTree:ENSGT00390000017666 HOGENOM:HOG000093949
OrthoDB:EOG4VX5FP EMBL:U78080 PIR:S46708 RefSeq:NP_011925.1
ProteinModelPortal:P38782 SMR:P38782 DIP:DIP-2093N IntAct:P38782
MINT:MINT-542534 STRING:P38782 PaxDb:P38782 PeptideAtlas:P38782
EnsemblFungi:YHR058C GeneID:856455 KEGG:sce:YHR058C CYGD:YHR058c
OMA:EPDFWVI NextBio:982090 Genevestigator:P38782 GermOnline:YHR058C
Uniprot:P38782
Length = 295
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 30/80 (37%), Positives = 47/80 (58%)
Query: 241 VQEPILYVIRKQHRHSME--------QTTPIADYYIIAGVVYQAPDLASVISSRLLSTVH 292
V+EP +VIRKQ R + + P+ DYYII +YQ+P + ++ SRL+ST +
Sbjct: 120 VREPDFWVIRKQRRTNNSGVGSAKGPEIIPLQDYYIIGANIYQSPTIFKIVQSRLMSTSY 179
Query: 293 HLQSAFEEVNSLSKYNPNKG 312
HL S E + L ++ P++G
Sbjct: 180 HLNSTLESLYDLIEFQPSQG 199
>TAIR|locus:2089488 [details] [associations]
symbol:MED6 species:3702 "Arabidopsis thaliana"
[GO:0001104 "RNA polymerase II transcription cofactor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016592 "mediator complex" evidence=IEA]
InterPro:IPR007018 InterPro:IPR016820 Pfam:PF04934
PIRSF:PIRSF023869 EMBL:CP002686 GenomeReviews:BA000014_GR
EMBL:AP001305 GO:GO:0016592 GO:GO:0001104 EMBL:AY070104
EMBL:AY091238 IPI:IPI00539385 IPI:IPI00938751 RefSeq:NP_001154633.1
RefSeq:NP_188772.2 UniGene:At.8297 IntAct:F4IXJ7 PRIDE:F4IXJ7
EnsemblPlants:AT3G21350.2 GeneID:821689 KEGG:ath:AT3G21350
TAIR:At3g21350 eggNOG:COG5097 HOGENOM:HOG000035127
InParanoid:Q9LIG1 KO:K15128 OMA:GICFRDQ ProtClustDB:CLSN2690559
PANTHER:PTHR13104 Uniprot:F4IXJ7
Length = 298
Score = 144 (55.7 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/61 (44%), Positives = 40/61 (65%)
Query: 243 EPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAFEEVN 302
EP L+V RKQ R E+ TP+ YYI+ G +YQAP L SV ++R+ T++++ AF +
Sbjct: 101 EPNLFVFRKQKRDGPEKVTPMLTYYILDGSIYQAPQLCSVFAARVSRTIYNISKAFTDAA 160
Query: 303 S 303
S
Sbjct: 161 S 161
>DICTYBASE|DDB_G0284421 [details] [associations]
symbol:med6 "putative mediator complex subunit 6"
species:44689 "Dictyostelium discoideum" [GO:0016592 "mediator
complex" evidence=IEA;ISS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0001104 "RNA
polymerase II transcription cofactor activity" evidence=IEA]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=IC] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR007018 Pfam:PF04934 dictyBase:DDB_G0284421
GenomeReviews:CM000153_GR GO:GO:0006367 EMBL:AAFI02000064
GO:GO:0016592 GO:GO:0001104 eggNOG:COG5097 KO:K15128
PANTHER:PTHR13104 RefSeq:XP_638621.1 EnsemblProtists:DDB0266854
GeneID:8624592 KEGG:ddi:DDB_G0284421 OMA:YVINGNI Uniprot:Q54PN3
Length = 267
Score = 137 (53.3 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 34/110 (30%), Positives = 54/110 (49%)
Query: 243 EPILYVIRKQHRHSMEQTTPIADYYIIAGVVYQAPDLASVISSRLLSTVHHLQSAFEEVN 302
EP ++I KQ R S YY+I G +YQAP+L V SR+ ++ HL AF ++
Sbjct: 131 EPSFFLIAKQTRISPTDVLINTLYYVINGNIYQAPELHVVFKSRVSQSISHLSEAFNSIS 190
Query: 303 SLSKYNPNKGYSWDSKMLPQGKDTVKKEIIKEEPSSIFQRQRVDMLLSEL 352
S+ ++ GYS + L K ++ I +R+D L++ L
Sbjct: 191 SIVNWDIVNGYSLN---LDPSNQQEKSKLAAYSRKQIEDTKRLDQLINSL 237
Score = 37 (18.1 bits), Expect = 6.2e-05, Sum P(2) = 6.2e-05
Identities = 9/23 (39%), Positives = 12/23 (52%)
Query: 1165 RLQSIVNSLFPKGSKAVVPRDTP 1187
RL ++NSLF K P + P
Sbjct: 229 RLDQLINSLFIKFPAINRPVENP 251
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.408 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 2056 1902 0.0010 125 3 11 22 0.37 34
40 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 32
No. of states in DFA: 634 (67 KB)
Total size of DFA: 777 KB (2328 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 151.08u 0.12s 151.20t Elapsed: 00:02:14
Total cpu time: 151.09u 0.12s 151.21t Elapsed: 00:02:14
Start: Thu Aug 15 14:00:54 2013 End: Thu Aug 15 14:03:08 2013