BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7132
(103 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9VGA2|TI17C_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 3 OS=Drosophila melanogaster GN=Tim17a1 PE=2 SV=1
Length = 222
Score = 139 bits (350), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 81/101 (80%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGG+LF +KGFRNAP+G+ RR G +K ++P +AG+FAVWGA FST+DC+LV+
Sbjct: 22 MGTIGGSLFEFLKGFRNAPTGLQRRLYGGIDLVKMRTPSIAGSFAVWGATFSTVDCALVH 81
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
R++ED WNSI+SGAATGGILAARNG+ AMA SAL+G L
Sbjct: 82 YRQREDAWNSILSGAATGGILAARNGIRAMANSALVGCLVL 122
>sp|Q9VNA0|TI17A_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 1 OS=Drosophila melanogaster GN=Tim17b1 PE=2 SV=2
Length = 179
Score = 130 bits (326), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 62/97 (63%), Positives = 73/97 (75%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG +GG F IKGFRNAPSG+ R G ++ +S ++ GNFAVWGA FS IDCSLVY
Sbjct: 23 MGALGGGAFQAIKGFRNAPSGLGYRLSGGLAAVRARSGLVGGNFAVWGATFSAIDCSLVY 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIG 97
RKKEDPWN+IISGA TGGILAAR G+ +M SAL+G
Sbjct: 83 FRKKEDPWNAIISGATTGGILAARTGLTSMLSSALVG 119
>sp|Q9VN97|TI17D_DROME Probable mitochondrial import inner membrane translocase subunit
Tim17 4 OS=Drosophila melanogaster GN=Tim17a2 PE=3 SV=1
Length = 224
Score = 129 bits (324), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 78/101 (77%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG +GG+LF +KGFRNAPSG+ R G +++ ++P +AG+FA+WGA FST+DC +V
Sbjct: 22 MGTMGGSLFQYLKGFRNAPSGLRRGLHGGIESVRLRTPAIAGSFAIWGATFSTVDCVMVS 81
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
R++ED WN+I+SGAATGGILAARNG+ AMA SA +G L
Sbjct: 82 YRQREDSWNAIVSGAATGGILAARNGIRAMANSAFVGCLVL 122
>sp|Q99595|TI17A_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Homo sapiens GN=TIMM17A PE=1 SV=1
Length = 171
Score = 129 bits (323), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 64/101 (63%), Positives = 73/101 (72%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGG +F IKGFRN+P G+N R G T IK ++P L G+FAVWG +FS IDCS+V
Sbjct: 23 MGTIGGGIFQAIKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSMIDCSMVQ 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
VR KEDPWNSI SGA TG ILAARNG AM GSA +G L
Sbjct: 83 VRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILL 123
>sp|Q9Z0V8|TI17A_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Mus musculus GN=Timm17a PE=2 SV=1
Length = 171
Score = 129 bits (323), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 63/101 (62%), Positives = 73/101 (72%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGG +F KGFRN+P G+N R G T IK ++P L G+FAVWG +FSTIDCS+V
Sbjct: 23 MGTIGGGIFQAFKGFRNSPVGINHRLRGSLTAIKTRAPQLGGSFAVWGGLFSTIDCSMVQ 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+R KEDPWNSI SGA TG ILAARNG AM GSA +G L
Sbjct: 83 IRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILL 123
>sp|O35092|TI17A_RAT Mitochondrial import inner membrane translocase subunit Tim17-A
OS=Rattus norvegicus GN=Timm17a PE=2 SV=1
Length = 171
Score = 127 bits (318), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 62/101 (61%), Positives = 72/101 (71%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGG +F KGFRN+P G+N R G T IK ++P L G+FAVWG +FSTIDC +V
Sbjct: 23 MGTIGGGIFQAFKGFRNSPVGVNHRLRGSLTAIKTRAPQLGGSFAVWGGLFSTIDCGMVQ 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+R KEDPWNSI SGA TG ILAARNG AM GSA +G L
Sbjct: 83 IRGKEDPWNSITSGALTGAILAARNGPVAMVGSAAMGGILL 123
>sp|Q9Z0V7|TI17B_MOUSE Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Mus musculus GN=Timm17b PE=2 SV=1
Length = 172
Score = 123 bits (308), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 59/101 (58%), Positives = 74/101 (73%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG+IGG +F IKGFRNAP G+ RF G ++ ++P + G+FAVWG +FSTIDC LV
Sbjct: 23 MGVIGGGVFQAIKGFRNAPVGIRHRFRGSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVR 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+R KEDPWNSI SGA TG +LAAR+G AM GSA++G L
Sbjct: 83 LRGKEDPWNSISSGALTGAVLAARSGPLAMVGSAMMGGILL 123
>sp|O60830|TI17B_HUMAN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Homo sapiens GN=TIMM17B PE=1 SV=1
Length = 172
Score = 121 bits (304), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 73/101 (72%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG+IGG +F IKGFRNAP G+ R G ++ ++P + G+FAVWG +FSTIDC LV
Sbjct: 23 MGVIGGGVFQAIKGFRNAPVGIRHRLRGSANAVRIRAPQIGGSFAVWGGLFSTIDCGLVR 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+R KEDPWNSI SGA TG +LAAR+G AM GSA++G L
Sbjct: 83 LRGKEDPWNSITSGALTGAVLAARSGPLAMVGSAMMGGILL 123
>sp|Q2HJE9|TI17B_BOVIN Mitochondrial import inner membrane translocase subunit Tim17-B
OS=Bos taurus GN=TIMM17B PE=2 SV=1
Length = 172
Score = 120 bits (301), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 72/101 (71%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG+IGG +F IKGFRNAP GM R G ++ ++P + G+FAVWG +FSTIDC LV
Sbjct: 23 MGVIGGGVFQAIKGFRNAPVGMRHRLRGSVNAVRIRAPQIGGSFAVWGGLFSTIDCGLVR 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+R KEDPWNSI SGA TG +LAAR+ AM GSA++G L
Sbjct: 83 LRGKEDPWNSITSGALTGAVLAARSVPLAMVGSAMMGGILL 123
>sp|Q9SP35|TI172_ARATH Mitochondrial import inner membrane translocase subunit TIM17-2
OS=Arabidopsis thaliana GN=TIM17-2 PE=1 SV=2
Length = 243
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 71/101 (70%), Gaps = 2/101 (1%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG +GG+ FH IKG N+P G RF+G T ++ +P G+FAVWG +FST DC++VY
Sbjct: 25 MGAVGGSAFHFIKGTYNSPKG--SRFVGGTQSVSMNAPRTGGSFAVWGGLFSTFDCTMVY 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+R+KEDPWNSII+GAATGG L+ R G A + SA+ G L
Sbjct: 83 LRQKEDPWNSIIAGAATGGFLSMRQGAGAASRSAIFGGVLL 123
>sp|Q9LN27|TI171_ARATH Mitochondrial import inner membrane translocase subunit TIM17-1
OS=Arabidopsis thaliana GN=TIM17-1 PE=2 SV=1
Length = 218
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 51/101 (50%), Positives = 68/101 (67%), Gaps = 2/101 (1%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG +GG+ +H I+G N+P G R G ++ P G+F+VWG ++ST DC+LVY
Sbjct: 25 MGAVGGSAYHLIRGIYNSPGGA--RLSGGVQALRMSGPRSGGSFSVWGGLYSTFDCALVY 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
R+KEDPWNSI+SGAATGG L+ R G+ A A SAL+G L
Sbjct: 83 ARQKEDPWNSILSGAATGGFLSLRQGLGASARSALVGGVLL 123
>sp|O44477|TIM17_CAEEL Probable mitochondrial import inner membrane translocase subunit
Tim17 OS=Caenorhabditis elegans GN=tim-17 PE=3 SV=1
Length = 181
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 50/101 (49%), Positives = 69/101 (68%), Gaps = 2/101 (1%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MGL+GG++F G++NA G ++ +GM ++ +S + FA WG MFSTIDC LV
Sbjct: 23 MGLVGGSIFQAFGGYKNAAKG--KKLVGMMREVRMRSTLTGVQFAAWGGMFSTIDCCLVA 80
Query: 61 VRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
+RKKEDP NSI+SG TG +LA R+G MAGSA++G+ L
Sbjct: 81 IRKKEDPINSIVSGGLTGALLAIRSGPKVMAGSAILGSVIL 121
>sp|P39515|TIM17_YEAST Mitochondrial import inner membrane translocase subunit TIM17
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM17 PE=1 SV=1
Length = 158
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 50/86 (58%), Positives = 63/86 (73%), Gaps = 2/86 (2%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGG ++HGIKGFRN+P G R G + IK ++P+L GNF VWG +FST DC++
Sbjct: 24 MGAIGGVVWHGIKGFRNSPLG--ERGSGAMSAIKARAPVLGGNFGVWGGLFSTFDCAVKA 81
Query: 61 VRKKEDPWNSIISGAATGGILAARNG 86
VRK+EDPWN+II+G TGG LA R G
Sbjct: 82 VRKREDPWNAIIAGFFTGGALAVRGG 107
>sp|P59670|TIM17_NEUCR Mitochondrial import inner membrane translocase subunit tim-17
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-17 PE=2 SV=1
Length = 155
Score = 100 bits (248), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 52/96 (54%), Positives = 65/96 (67%), Gaps = 3/96 (3%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGG ++HGIKGFRN+P G R +G T IK ++P L GNF VWG +FST DC++
Sbjct: 22 MGAIGGTIWHGIKGFRNSPYGERR--IGAITAIKMRAPALGGNFGVWGGLFSTFDCAIKG 79
Query: 61 VR-KKEDPWNSIISGAATGGILAARNGVPAMAGSAL 95
+R KEDPWNSI++G TGG LA R G A A+
Sbjct: 80 LRNHKEDPWNSILAGFFTGGALAVRGGYKAARNGAI 115
>sp|P87130|TIM17_SCHPO Mitochondrial import inner membrane translocase subunit tim17
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim17 PE=3 SV=1
Length = 164
Score = 99.8 bits (247), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 61/86 (70%), Gaps = 2/86 (2%)
Query: 1 MGLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVY 60
MG IGGA++H IKG+RN+P G R + K ++P+L GNF VWG +FST DC++
Sbjct: 25 MGTIGGAIWHSIKGWRNSPPGEKR--ISAIAAAKTRAPVLGGNFGVWGGLFSTFDCAVKG 82
Query: 61 VRKKEDPWNSIISGAATGGILAARNG 86
VR+KEDPWN+II+G TGG LA R G
Sbjct: 83 VRRKEDPWNAIIAGFFTGGALAVRGG 108
>sp|Q9LYG1|TI173_ARATH Mitochondrial import inner membrane translocase subunit TIM17-3
OS=Arabidopsis thaliana GN=TIM17-3 PE=2 SV=1
Length = 133
Score = 97.4 bits (241), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 70/100 (70%), Gaps = 2/100 (2%)
Query: 2 GLIGGALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYV 61
G +GG+++H ++G N+P G R++G T +P L G FAV+G + ST D +LV +
Sbjct: 26 GAVGGSVYHFVRGAYNSPIGA--RYVGGTQAASMNAPRLGGTFAVFGGLLSTFDYALVRI 83
Query: 62 RKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
RKKEDPWNSI++GAATGG+L+ R GV A + SA++ F+L
Sbjct: 84 RKKEDPWNSIVAGAATGGVLSIRKGVVAASTSAVMFGFFL 123
>sp|Q54K35|TIM17_DICDI Mitochondrial import inner membrane translocase subunit tim17
OS=Dictyostelium discoideum GN=timm17 PE=3 SV=1
Length = 183
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 14 GFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIIS 73
GF+ +P N+R L +++KSP GNFA+WG++FS DC+L Y+RK ED N I +
Sbjct: 32 GFKRSPP--NKRVLYTFALLRKKSPKFGGNFAIWGSLFSGFDCTLSYIRKTEDTVNPIAA 89
Query: 74 GAATGGILAARNGVPAMAGSALIGAFYL 101
GA TGGILAAR+G +A G ++
Sbjct: 90 GALTGGILAARSGWKHSVQAAAFGGIFI 117
>sp|Q9JKW1|TIM22_RAT Mitochondrial import inner membrane translocase subunit Tim22
OS=Rattus norvegicus GN=Timm22 PE=2 SV=2
Length = 192
Score = 46.6 bits (109), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 32/55 (58%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 89
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R GV A
Sbjct: 118 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKA 172
>sp|Q9CQ85|TIM22_MOUSE Mitochondrial import inner membrane translocase subunit Tim22
OS=Mus musculus GN=Timm22 PE=2 SV=1
Length = 194
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 91
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R GV A A
Sbjct: 120 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGVKAGA 176
>sp|Q5M7K0|TIM22_XENTR Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus tropicalis GN=timm22 PE=2 SV=1
Length = 186
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 33/57 (57%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 91
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R G+ A A
Sbjct: 112 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKAGA 168
>sp|Q5BIN4|TIM22_BOVIN Mitochondrial import inner membrane translocase subunit Tim22
OS=Bos taurus GN=TIMM22 PE=2 SV=1
Length = 194
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 32/55 (58%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 89
Q+ A NFA+ GAMFS +C + R K D NS+ISG TGG + R G+ A
Sbjct: 120 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVISGCITGGAIGFRAGLKA 174
>sp|Q5U4U5|TIM22_XENLA Mitochondrial import inner membrane translocase subunit Tim22
OS=Xenopus laevis GN=timm22 PE=2 SV=1
Length = 184
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 89
Q+ A NFA+ GAMFS +C + R K D NS++SG TGG + R G+ A
Sbjct: 110 QRGMSYAKNFAIVGAMFSCTECLVESYRGKSDWKNSVMSGCITGGAIGFRAGLKA 164
>sp|Q9C1E8|TIM22_NEUCR Mitochondrial import inner membrane translocase subunit tim-22
OS=Neurospora crassa (strain ATCC 24698 / 74-OR23-1A /
CBS 708.71 / DSM 1257 / FGSC 987) GN=tim-22 PE=3 SV=2
Length = 194
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 34/57 (59%), Gaps = 1/57 (1%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 91
Q+S A NFA GA+FS I+C + +R K D N + +G TG IL A+NG P A
Sbjct: 114 QRSYSTAKNFAKVGALFSGIECGIEGLRAKNDLGNGVAAGCLTGAIL-AKNGGPQAA 169
>sp|Q9Y584|TIM22_HUMAN Mitochondrial import inner membrane translocase subunit Tim22
OS=Homo sapiens GN=TIMM22 PE=1 SV=2
Length = 194
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 32/57 (56%)
Query: 35 QKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMA 91
Q+ A NFA+ GAMFS +C + R D NS+ISG TGG + R G+ A A
Sbjct: 120 QRGMSYAKNFAIVGAMFSCTECLIESYRGTSDWKNSVISGCITGGAIGFRAGLKAGA 176
>sp|Q2UAP8|TIM22_ASPOR Mitochondrial import inner membrane translocase subunit tim22
OS=Aspergillus oryzae (strain ATCC 42149 / RIB 40)
GN=tim22 PE=3 SV=1
Length = 184
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 27/41 (65%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGIL 81
A NF + GA++S +C + +R K D NS+ISG TGGIL
Sbjct: 111 AKNFGIVGALYSGTECCVEGLRAKNDLSNSVISGCITGGIL 151
>sp|A1XJK0|TI224_ARATH Mitochondrial import inner membrane translocase subunit TIM22-4
OS=Arabidopsis thaliana GN=TIM22-4 PE=2 SV=3
Length = 142
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 35/66 (53%)
Query: 24 RRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAA 83
++F+ + Q+S FAV G +FS +C + R K D N+ I+G TGG ++A
Sbjct: 54 QQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSA 113
Query: 84 RNGVPA 89
R G A
Sbjct: 114 RGGPKA 119
>sp|Q6BZY4|TIM22_YARLI Mitochondrial import inner membrane translocase subunit TIM22
OS=Yarrowia lipolytica (strain CLIB 122 / E 150)
GN=TIM22 PE=3 SV=2
Length = 185
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVP-AMAGSALIGAF 99
A NF G +FS +C + +R K D WN + +G TGG LA + G A+ G A AF
Sbjct: 104 AKNFGFIGGVFSGTECCIESLRAKNDIWNGVAAGCLTGGGLAVKAGPQAALVGCAGFAAF 163
>sp|P87146|TIM22_SCHPO Mitochondrial import inner membrane translocase subunit tim22
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim22 PE=3 SV=1
Length = 175
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAM 90
A NF + G ++S +C + R K D +N+I +G TGG LA R+G A+
Sbjct: 104 AKNFGLLGLIYSGSECCIEAFRAKTDIYNAIAAGVFTGGALAVRSGPKAI 153
>sp|A2RVP7|TI221_ARATH Mitochondrial import inner membrane translocase subunit TIM22-1
OS=Arabidopsis thaliana GN=TIM22-1 PE=2 SV=1
Length = 173
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 34/63 (53%)
Query: 24 RRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAA 83
++F+ + Q+S FAV G +FS +C + R K D N+ I+G TGG ++A
Sbjct: 85 QQFVFTAKQMGQRSWNSCKTFAVMGLVFSAAECIVEKARAKHDTVNTAIAGCVTGGSMSA 144
Query: 84 RNG 86
R G
Sbjct: 145 RGG 147
>sp|Q75E80|TIM22_ASHGO Mitochondrial import inner membrane translocase subunit TIM22
OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
FGSC 9923 / NRRL Y-1056) GN=TIM22 PE=3 SV=1
Length = 201
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 34/58 (58%), Gaps = 4/58 (6%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGA 98
A NF G ++S ++C++ +R K D +N + +G TGG LA ++G A ALIG
Sbjct: 120 AKNFGYIGMIYSGVECTIESLRAKNDLYNGVAAGCLTGGGLAYKSGPSA----ALIGC 173
>sp|Q6BT35|TIM22_DEBHA Mitochondrial import inner membrane translocase subunit TIM22
OS=Debaryomyces hansenii (strain ATCC 36239 / CBS 767 /
JCM 1990 / NBRC 0083 / IGC 2968) GN=TIM22 PE=3 SV=1
Length = 182
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNG-VPAMAGSALIGAF 99
A NF G ++S ++C++ +R K D +N + +G TGG LA R G A+ G A AF
Sbjct: 101 AKNFGYIGMVYSGVECAIESLRAKHDIYNGVSAGCITGGGLAIRAGPQAALVGCAGFAAF 160
>sp|Q6FT37|TIM22_CANGA Mitochondrial import inner membrane translocase subunit TIM22
OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM
3761 / NBRC 0622 / NRRL Y-65) GN=TIM22 PE=3 SV=1
Length = 193
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVP-AMAGSALIGAF 99
A NF G +++ ++C++ +R K D +N I +G TGG LA ++G A+ G A AF
Sbjct: 112 AKNFGYIGMIYAGVECAVESLRAKNDIYNGITAGCITGGGLAYKSGPQAALVGCAGFAAF 171
>sp|Q6CRJ6|TIM22_KLULA Mitochondrial import inner membrane translocase subunit TIM22
OS=Kluyveromyces lactis (strain ATCC 8585 / CBS 2359 /
DSM 70799 / NBRC 1267 / NRRL Y-1140 / WM37) GN=TIM22
PE=3 SV=1
Length = 196
Score = 37.7 bits (86), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVP-AMAGSALIGAF 99
A NF G ++S ++C + +R K D +N + +G TGG LA ++G A+ G A AF
Sbjct: 115 AKNFGYIGMIYSGVECVVESLRAKNDIYNGVAAGCLTGGGLAYKSGPQAALVGCAGFAAF 174
>sp|Q9LNQ1|TI231_ARATH Mitochondrial import inner membrane translocase subunit TIM23-1
OS=Arabidopsis thaliana GN=TIM23-1 PE=2 SV=1
Length = 187
Score = 35.8 bits (81), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 7/83 (8%)
Query: 8 LFHGIKGFRNAPS---GMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKK 64
+F GIK F N + +NR + + Q + G +++ I+ +V V K
Sbjct: 79 IFSGIKSFENGDTTKLKINR----ILNSSGQAGRTWGNRVGIVGLIYAGIESGVVAVTDK 134
Query: 65 EDPWNSIISGAATGGILAARNGV 87
+D W S+++G TG + A GV
Sbjct: 135 DDVWTSVVAGLGTGAVFRAARGV 157
>sp|Q12328|TIM22_YEAST Mitochondrial import inner membrane translocase subunit TIM22
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM22 PE=1 SV=1
Length = 207
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 32/59 (54%)
Query: 31 TTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPA 89
T + +KS A NF G +++ ++C + +R K D +N + +G TG LA + G A
Sbjct: 116 TDMGKKSYSSAKNFGYIGMIYAGVECVIESLRAKNDIYNGVTAGFFTGAGLAYKAGPQA 174
>sp|Q80W89|NDUAB_RAT NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
OS=Rattus norvegicus GN=Ndufa11 PE=2 SV=1
Length = 141
Score = 34.3 bits (77), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 45 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
A GAMF C VR+K +DP N I G A G L AR G+A IG Y+
Sbjct: 64 AAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLTLGART---HSYGTAAIGCVYM 118
>sp|P0CR88|TIM22_CRYNJ Mitochondrial import inner membrane translocase subunit TIM22
OS=Cryptococcus neoformans var. neoformans serotype D
(strain JEC21 / ATCC MYA-565) GN=TIM22 PE=3 SV=1
Length = 187
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 44 FAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 92
FA G ++S ++C + R K D +N + +G TG ILA G AM G
Sbjct: 115 FAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAILARNAGPTAMLG 163
>sp|P0CR89|TIM22_CRYNB Mitochondrial import inner membrane translocase subunit TIM22
OS=Cryptococcus neoformans var. neoformans serotype D
(strain B-3501A) GN=TIM22 PE=3 SV=1
Length = 187
Score = 33.9 bits (76), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 27/49 (55%)
Query: 44 FAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAG 92
FA G ++S ++C + R K D +N + +G TG ILA G AM G
Sbjct: 115 FAKVGMVYSGVECCIEGYRAKNDIYNGVSAGFLTGAILARNAGPTAMLG 163
>sp|Q8PUR8|EF1A_METMA Elongation factor 1-alpha OS=Methanosarcina mazei (strain ATCC
BAA-159 / DSM 3647 / Goe1 / Go1 / JCM 11833 / OCM 88)
GN=tuf PE=3 SV=1
Length = 422
Score = 33.5 bits (75), Expect = 0.37, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 14 GFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDP 67
G + P + F+G ++ S I AG V+ A S I C L+ + KK DP
Sbjct: 306 GHADNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIALNKKLDP 359
>sp|Q8TRC4|EF1A_METAC Elongation factor 1-alpha OS=Methanosarcina acetivorans (strain
ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=tuf PE=3
SV=1
Length = 422
Score = 33.5 bits (75), Expect = 0.43, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 14 GFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDP 67
G + P + F+G ++ S I AG V+ A S I C L+ + KK DP
Sbjct: 306 GHTDNPPKVADEFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLISLDKKLDP 359
>sp|Q464Z4|EF1A_METBF Elongation factor 1-alpha OS=Methanosarcina barkeri (strain Fusaro
/ DSM 804) GN=tuf PE=3 SV=1
Length = 422
Score = 33.1 bits (74), Expect = 0.45, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 26/54 (48%)
Query: 14 GFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDP 67
G + P + F+G ++ S I AG V+ A S I C L+ + KK DP
Sbjct: 306 GHTDNPPKVADTFVGQIVVLQHPSAITAGYTPVFHAHTSQIACQLIELNKKLDP 359
>sp|Q9USM7|TIM23_SCHPO Mitochondrial import inner membrane translocase subunit tim23
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=tim23 PE=3 SV=1
Length = 210
Score = 33.1 bits (74), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 47/93 (50%), Gaps = 3/93 (3%)
Query: 4 IGG--ALFHGIKGFRNAPSGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYV 61
IGG L G+K ++ S R G+ + ++ P + + V +++ I+ + Y
Sbjct: 97 IGGLWGLNEGMKKTKDITS-TRLRLNGILNGVTRRGPFVGNSLGVLALVYNGINSLIGYK 155
Query: 62 RKKEDPWNSIISGAATGGILAARNGVPAMAGSA 94
R+K NS+ +GA TG + + G+ AMA S+
Sbjct: 156 RQKHGWENSVAAGALTGALYKSTRGLRAMAISS 188
>sp|Q9D8B4|NDUAB_MOUSE NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
OS=Mus musculus GN=Ndufa11 PE=2 SV=2
Length = 141
Score = 32.7 bits (73), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 28/58 (48%), Gaps = 4/58 (6%)
Query: 45 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARNGVPAMAGSALIGAFYL 101
A GAMF C VR+K +DP N I G A G L AR G+A +G Y+
Sbjct: 64 AAIGAMFGLTTCVSAQVREKPDDPLNYFIGGCAGGLTLGART---HSYGTAAMGCVYM 118
>sp|Q2FPC7|G1PDH_METHJ Glycerol-1-phosphate dehydrogenase [NAD(P)+] OS=Methanospirillum
hungatei (strain JF-1 / DSM 864) GN=egsA PE=3 SV=1
Length = 359
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 26/45 (57%)
Query: 54 IDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSALIGA 98
IDC+ + K+ P+ S+ + A+ GI++ R +P GS +GA
Sbjct: 110 IDCAKIVSYKQGKPFISVPTAASHDGIISGRATLPTETGSVSVGA 154
>sp|Q9STE1|PP333_ARATH Pentatricopeptide repeat-containing protein At4g21300
OS=Arabidopsis thaliana GN=PCMP-E36 PE=3 SV=1
Length = 857
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 12/62 (19%)
Query: 20 SGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGG 79
S + R LGM + G+F+ G MF +D +R PWNSIIS G
Sbjct: 70 SYTDERILGMYA--------MCGSFSDCGKMFYRLDLRRSSIR----PWNSIISSFVRNG 117
Query: 80 IL 81
+L
Sbjct: 118 LL 119
>sp|P32897|TIM23_YEAST Mitochondrial import inner membrane translocase subunit TIM23
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=TIM23 PE=1 SV=1
Length = 222
Score = 32.0 bits (71), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 43/90 (47%), Gaps = 3/90 (3%)
Query: 12 IKGFRNAP--SGMNRRFLGMTTTIKQKSPILAGNFAVWGAMFSTIDCSLVYVRKKEDPWN 69
++G +N P S + + I ++ P L N + ++ I+ ++ +R K D
Sbjct: 118 MQGLQNIPPNSPGKLQLNTVLNHITKRGPFLGNNAGILALSYNIINSTIDALRGKHDTAG 177
Query: 70 SIISGAATGGILAARNGVPAMA-GSALIGA 98
SI +GA TG + + G+ M SA++ A
Sbjct: 178 SIGAGALTGALFKSSKGLKPMGYSSAMVAA 207
>sp|Q8HXG6|NDUAB_BOVIN NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11
OS=Bos taurus GN=NDUFA11 PE=1 SV=3
Length = 141
Score = 31.6 bits (70), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 23/42 (54%), Gaps = 1/42 (2%)
Query: 45 AVWGAMFSTIDCSLVYVRKK-EDPWNSIISGAATGGILAARN 85
A GA+F C VR+K +DP N +I G A G IL AR
Sbjct: 64 AAIGAIFGLTSCISAQVREKPDDPLNYLIGGCAGGLILGART 105
>sp|Q6NKU9|TI223_ARATH Mitochondrial import inner membrane translocase subunit TIM22-3
OS=Arabidopsis thaliana GN=TIM22-3 PE=2 SV=1
Length = 214
Score = 30.8 bits (68), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 29/60 (48%), Gaps = 1/60 (1%)
Query: 41 AGNFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARNGVPAMAGSAL-IGAF 99
A FAV + S + C L +R K+D N ++G TG L+ AM S L GAF
Sbjct: 88 AKTFAVLSGVHSLVVCLLKQIRGKDDAINVGVAGCCTGLALSFPGAPQAMLQSCLTFGAF 147
>sp|B2VEZ3|NTPA_ERWT9 Non-canonical purine NTP pyrophosphatase OS=Erwinia tasmaniensis
(strain DSM 17950 / Et1/99) GN=ETA_28410 PE=3 SV=1
Length = 205
Score = 30.8 bits (68), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 33/72 (45%), Gaps = 2/72 (2%)
Query: 18 APSGMNRRFLGMTTTIKQK-SPILAGNFAV-WGAMFSTIDCSLVYVRKKEDPWNSIISGA 75
AP + R+ G T +Q +LA AV G + C LVY+R DP + G+
Sbjct: 88 APGIYSARYAGEEATDRQNLDKLLAALNAVPDGERQAHFHCVLVYLRHAADPTPLVFHGS 147
Query: 76 ATGGILAARNGV 87
TG I + GV
Sbjct: 148 WTGEIAHSAAGV 159
>sp|P25710|NUJM_NEUCR NADH-ubiquinone oxidoreductase 21.3 kDa subunit OS=Neurospora
crassa (strain ATCC 24698 / 74-OR23-1A / CBS 708.71 /
DSM 1257 / FGSC 987) GN=B13D24.010 PE=4 SV=1
Length = 200
Score = 30.4 bits (67), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 34/68 (50%), Gaps = 8/68 (11%)
Query: 43 NFAVWGAMFSTIDCSLVYVRKKEDPWNSIISGAATGGILAARN-------GVPAMAGSAL 95
+F + G ++ + +R+KED WN I G ++ R+ G AMAGS +
Sbjct: 60 SFTLAGGIYRFAQQASANLREKEDGWNHAIGAFLGGSVMGLRSLRFPVILGFGAMAGS-V 118
Query: 96 IGAFYLNG 103
+GAF +G
Sbjct: 119 VGAFAFSG 126
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.323 0.139 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 39,050,319
Number of Sequences: 539616
Number of extensions: 1441469
Number of successful extensions: 3129
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 3065
Number of HSP's gapped (non-prelim): 68
length of query: 103
length of database: 191,569,459
effective HSP length: 72
effective length of query: 31
effective length of database: 152,717,107
effective search space: 4734230317
effective search space used: 4734230317
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)