Query psy7132
Match_columns 103
No_of_seqs 102 out of 657
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 18:59:57 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7132.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7132hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2elu_A Zinc finger protein 406 47.4 4.2 0.00014 20.9 0.1 18 51-68 19-36 (37)
2 2lck_A Mitochondrial uncouplin 37.5 1.1E+02 0.0036 21.6 7.0 35 48-82 179-217 (303)
3 2imj_A Hypothetical protein DU 25.4 12 0.00042 25.6 -0.4 17 54-70 16-32 (166)
4 2lck_A Mitochondrial uncouplin 24.9 76 0.0026 22.4 3.7 33 51-83 85-120 (303)
5 3o5t_A Dinitrogenase reductase 23.1 29 0.00099 25.0 1.2 26 2-27 248-273 (297)
6 1t5j_A Hypothetical protein MJ 20.7 36 0.0012 24.5 1.3 26 2-27 260-285 (313)
7 2yzv_A ADP-ribosylglycohydrola 19.5 43 0.0015 24.0 1.5 26 2-27 256-281 (303)
8 2foz_A ADP-ribosylhydrolase li 18.5 44 0.0015 24.2 1.3 26 2-27 303-328 (347)
9 1okc_A ADP, ATP carrier protei 17.9 2.5E+02 0.0087 19.4 5.5 35 48-82 188-224 (297)
10 2woe_A ADP-ribosyl-[dinitrogen 17.6 45 0.0015 23.8 1.2 26 2-27 253-278 (299)
No 1
>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A
Probab=47.41 E-value=4.2 Score=20.87 Aligned_cols=18 Identities=22% Similarity=0.442 Sum_probs=14.0
Q ss_pred HHHHHhHhhhhhccCChH
Q psy7132 51 FSTIDCSLVYVRKKEDPW 68 (103)
Q Consensus 51 fs~~~~~~~~~R~k~D~~ 68 (103)
|+-+..+++.+|+.+|+.
T Consensus 19 ysdvknlikhire~hd~~ 36 (37)
T 2elu_A 19 YSDVKNLIKHIRDAHDPQ 36 (37)
T ss_dssp CSSHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHhcCCC
Confidence 455678889999988863
No 2
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=37.45 E-value=1.1e+02 Score=21.60 Aligned_cols=35 Identities=20% Similarity=-0.015 Sum_probs=20.9
Q ss_pred HHHHHHHHhHhhhhhc----cCChHHHHHHHHHHHHHhh
Q psy7132 48 GAMFSTIDCSLVYVRK----KEDPWNSIISGAATGGILA 82 (103)
Q Consensus 48 g~~fs~~~~~~~~~R~----k~D~~N~~~aG~~tGa~~~ 82 (103)
+..|...|..-+.+.+ +++.+..+++|+++|.+-.
T Consensus 179 ~i~f~~ye~~k~~l~~~~~~~~~~~~~~~~g~~ag~~~~ 217 (303)
T 2lck_A 179 CAELVTYDLIKDTLLKANLMTDDLPCHFTSAFGAGFCTT 217 (303)
T ss_dssp HHHHHHHHHHHHTTTTTTSCCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhccCCCCchHHHHHHHHHHHHHHH
Confidence 3444555555444432 3456778888888887644
No 3
>2imj_A Hypothetical protein DUF1348; alpha beta protein, structural genomics, PSI-2, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5} SCOP: d.17.4.23
Probab=25.39 E-value=12 Score=25.60 Aligned_cols=17 Identities=35% Similarity=0.638 Sum_probs=14.5
Q ss_pred HHhHhhhhhccCChHHH
Q psy7132 54 IDCSLVYVRKKEDPWNS 70 (103)
Q Consensus 54 ~~~~~~~~R~k~D~~N~ 70 (103)
.|.+++++|-.+|.||+
T Consensus 16 ~EtA~~KVr~AEDaWNs 32 (166)
T 2imj_A 16 RESAIEKIRLAEDGWNS 32 (166)
T ss_dssp HHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHhhhcc
Confidence 46788999999999996
No 4
>2lck_A Mitochondrial uncoupling protein 2; membrane protein, proton translocator, mitochondrial carrier transport protein, structural genomics; NMR {Mus musculus}
Probab=24.87 E-value=76 Score=22.40 Aligned_cols=33 Identities=18% Similarity=0.306 Sum_probs=20.0
Q ss_pred HHHHHhHhhhhhc---cCChHHHHHHHHHHHHHhhh
Q psy7132 51 FSTIDCSLVYVRK---KEDPWNSIISGAATGGILAA 83 (103)
Q Consensus 51 fs~~~~~~~~~R~---k~D~~N~~~aG~~tGa~~~~ 83 (103)
|...|..-+.+.+ +.+.+..+++|+++|.+-..
T Consensus 85 f~~ye~~k~~~~~~~~~~~~~~~~~ag~~ag~~~~~ 120 (303)
T 2lck_A 85 IGLYDSVKQFYTKGSEHAGIGSRLLAGSTTGALAVA 120 (303)
T ss_dssp TTHHHHHHHHHSCCCSSCCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCcCCcHHHHHHHHHHHHHHHHH
Confidence 3444444444433 24677888999998877544
No 5
>3o5t_A Dinitrogenase reductase activacting glicohydrolas; ADP binding, hydrolase-transcription complex; HET: ADP; 2.09A {Azospirillum brasilense} SCOP: a.209.1.0 PDB: 3g9d_A*
Probab=23.15 E-value=29 Score=24.98 Aligned_cols=26 Identities=27% Similarity=0.374 Sum_probs=21.1
Q ss_pred chhHhhHHHHHHhhhhCCccchhhhh
Q psy7132 2 GLIGGALFHGIKGFRNAPSGMNRRFL 27 (103)
Q Consensus 2 G~~~G~~~g~~~g~~~~p~~~~~r~~ 27 (103)
++|.|++.|...|...-|..|++++.
T Consensus 248 aaIaGalaGA~~G~~~IP~~w~~~l~ 273 (297)
T 3o5t_A 248 GAIAGMLAGATYGVETIPPRWLRKLD 273 (297)
T ss_dssp HHHHHHHHHHHHCGGGSCHHHHTTSC
T ss_pred HHHHHHHHHHHhCcccCCHHHHHHHh
Confidence 67899999999999888877765554
No 6
>1t5j_A Hypothetical protein MJ1187; putative hydrolase, structural genomics, PSI, protein structure initiative; 2.70A {Methanocaldococcus jannaschii} SCOP: a.209.1.1
Probab=20.73 E-value=36 Score=24.51 Aligned_cols=26 Identities=23% Similarity=0.305 Sum_probs=21.2
Q ss_pred chhHhhHHHHHHhhhhCCccchhhhh
Q psy7132 2 GLIGGALFHGIKGFRNAPSGMNRRFL 27 (103)
Q Consensus 2 G~~~G~~~g~~~g~~~~p~~~~~r~~ 27 (103)
+++.|++.|.+.|...-|..|++++.
T Consensus 260 aai~Gal~GA~~G~~~IP~~w~~~l~ 285 (313)
T 1t5j_A 260 ASMYGAMAGAYYGFKNIPKEWIDGLK 285 (313)
T ss_dssp HHHHHHHHHHHHCGGGSCHHHHHTSS
T ss_pred HHHHHHHHHHhhCcccCCHHHHHHHh
Confidence 67899999999999888987765554
No 7
>2yzv_A ADP-ribosylglycohydrolase; all alpha protein, structural genomics, NPPSFA, N project on protein structural and functional analyses; 1.60A {Thermus thermophilus} PDB: 2cwc_A 2yzw_A
Probab=19.46 E-value=43 Score=24.02 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=21.2
Q ss_pred chhHhhHHHHHHhhhhCCccchhhhh
Q psy7132 2 GLIGGALFHGIKGFRNAPSGMNRRFL 27 (103)
Q Consensus 2 G~~~G~~~g~~~g~~~~p~~~~~r~~ 27 (103)
+++.|++.|...|...-|..|++++.
T Consensus 256 aai~Gal~GA~~G~~~IP~~w~~~l~ 281 (303)
T 2yzv_A 256 GAVYGQLAGAYYGLGAIPGRWLRALH 281 (303)
T ss_dssp HHHHHHHHHHHHCGGGSCHHHHHHCT
T ss_pred HHHHHHHHHHHhCccccCHHHHHHHh
Confidence 67899999999999888877765554
No 8
>2foz_A ADP-ribosylhydrolase like 2; all alpha-helical, metal binding; 1.60A {Homo sapiens} PDB: 2fp0_A 2g4k_A 2qty_A
Probab=18.50 E-value=44 Score=24.19 Aligned_cols=26 Identities=15% Similarity=0.288 Sum_probs=21.2
Q ss_pred chhHhhHHHHHHhhhhCCccchhhhh
Q psy7132 2 GLIGGALFHGIKGFRNAPSGMNRRFL 27 (103)
Q Consensus 2 G~~~G~~~g~~~g~~~~p~~~~~r~~ 27 (103)
+++.|++.|.+.|...-|..|++++.
T Consensus 303 aaiaGal~GA~~G~~~IP~~w~~~l~ 328 (347)
T 2foz_A 303 ATMAGAIAGAYYGMDQVPESWQQSCE 328 (347)
T ss_dssp HHHHHHHHHHHHCGGGSCHHHHHTBT
T ss_pred HHHHHHHHHHhhCcccCCHHHHHHHH
Confidence 67899999999999888877765553
No 9
>1okc_A ADP, ATP carrier protein heart isoform T1; mitochondrial transporter, nucleotide translocation, membrane protein, transport; HET: CXT CDL LDM PC1; 2.2A {Bos taurus} SCOP: f.42.1.1 PDB: 2c3e_A*
Probab=17.94 E-value=2.5e+02 Score=19.39 Aligned_cols=35 Identities=11% Similarity=0.069 Sum_probs=20.0
Q ss_pred HHHHHHHHhHhhhhhc--cCChHHHHHHHHHHHHHhh
Q psy7132 48 GAMFSTIDCSLVYVRK--KEDPWNSIISGAATGGILA 82 (103)
Q Consensus 48 g~~fs~~~~~~~~~R~--k~D~~N~~~aG~~tGa~~~ 82 (103)
+..|...|..-+.+++ +++.+..+++|+++|.+-.
T Consensus 188 ~~~f~~ye~~k~~~~~~~~~~~~~~~~~g~~ag~~a~ 224 (297)
T 1okc_A 188 AAYFGVYDTAKGMLPDPKNVHIIVSWMIAQTVTAVAG 224 (297)
T ss_dssp HHHHHHHHHHHHSSCGGGCSCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhccCCCccHHHHHHHHHHHHHHHH
Confidence 3445555555444432 3456677788887776543
No 10
>2woe_A ADP-ribosyl-[dinitrogen reductase] glycohydrolase; dimanganese, nitrogen fixation, ADP-ribosylglycohydrolase, mono-ADP-ribosylhydrolase; HET: AR6 TLA; 1.90A {Rhodospirillum rubrum} PDB: 2woc_A 2wod_A*
Probab=17.63 E-value=45 Score=23.84 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=21.1
Q ss_pred chhHhhHHHHHHhhhhCCccchhhhh
Q psy7132 2 GLIGGALFHGIKGFRNAPSGMNRRFL 27 (103)
Q Consensus 2 G~~~G~~~g~~~g~~~~p~~~~~r~~ 27 (103)
+++.|++.|...|...-|..|++++.
T Consensus 253 aai~Gal~GA~~G~~~IP~~w~~~l~ 278 (299)
T 2woe_A 253 GALAGMLAGATYGVDDIPSGWLSKLD 278 (299)
T ss_dssp HHHHHHHHHHHHCGGGSCHHHHTTSC
T ss_pred HHHHHHHHHHHhCchhCCHHHHHHHh
Confidence 67899999999999888877765554
Done!