Query psy7139
Match_columns 876
No_of_seqs 161 out of 195
Neff 3.0
Searched_HMMs 13730
Date Fri Aug 16 19:09:21 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7139.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7139hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1t6sa1 a.4.5.60 (A:1-85) Segr 58.5 1.9 0.00014 35.4 1.9 60 650-721 19-80 (85)
2 d1czan4 c.55.1.3 (N:671-913) M 13.4 1.6E+02 0.012 27.5 6.9 55 711-765 74-139 (243)
3 d1e42a2 d.105.1.1 (A:825-937) 10.9 67 0.0049 27.7 2.8 22 794-816 1-22 (113)
4 d2sasa_ a.39.1.5 (A:) Sarcopla 10.9 1.8E+02 0.013 23.9 5.6 66 717-814 103-169 (185)
5 d1u0ma2 c.95.1.2 (A:202-349) P 10.9 1.3E+02 0.0097 25.9 4.9 60 706-765 28-102 (148)
6 d3blza1 d.17.4.14 (A:3-126) Un 10.4 42 0.0031 27.4 1.2 16 701-716 104-119 (124)
7 d2pq3a1 a.39.1.5 (A:3-75) Calm 8.0 1.7E+02 0.012 21.8 3.9 27 738-764 25-54 (73)
8 d1mbya_ d.223.1.1 (A:) Serine/ 7.9 1.2E+02 0.0087 24.8 3.0 33 827-861 36-68 (75)
9 d1tiza_ a.39.1.5 (A:) Calmodul 7.7 1.7E+02 0.012 21.4 3.7 26 738-763 18-46 (67)
10 d1mb6a_ g.3.6.2 (A:) Huwentoxi 7.5 60 0.0044 23.2 0.8 13 81-93 8-20 (35)
No 1
>d1t6sa1 a.4.5.60 (A:1-85) Segregation and condensation protein B, ScpB {Chlorobium tepidum [TaxId: 1097]}
Probab=58.46 E-value=1.9 Score=35.38 Aligned_cols=60 Identities=22% Similarity=0.272 Sum_probs=40.9
Q ss_pred cccccCCCCCCcccc--cCHHHHHHHHHHhCCCCccchhhhhhccccccCCCeeeEEEcCEEEEeChHHHHHHH
Q psy7139 650 TEETVNPPTDQQCIE--ISDETLGTTEETVNPPTDQQCIEIKRFDRANSSLGFRFLLFPGYIRTLDHDYNFRML 721 (876)
Q Consensus 650 ~~~~~~~~~l~q~IQ--ASdeEL~~~L~~l~~~~~~~c~~~~A~~~~~~~~~~~~cEIDGywRLLSpsYLtrIL 721 (876)
..+|++...+.+.+. .|..++.++|.++. +-++ +..-||+.++++|.||+....=....+
T Consensus 19 s~~Pls~~~L~~~l~~~~~~~~i~~~l~~L~----------~~y~--~~~~g~el~~~~~gy~~~tk~e~~~~v 80 (85)
T d1t6sa1 19 SEEPVNLQTLSQITAHKFTPSELQEAVDELN----------RDYE--ATGRTFRIHAIAGGYRFLTEPEFADLV 80 (85)
T ss_dssp CSSCBCHHHHHHHTTCCCCHHHHHHHHHHHH----------HHHH--HHTCSEEEEEETTEEEEEECGGGHHHH
T ss_pred cCCCCCHHHHHHHHccCCCHHHHHHHHHHHH----------HHHh--cCCCcEEEEEECCEEEEEEhHHHHHHH
Confidence 356677767776674 78999999999987 1122 234599999999988887644333333
No 2
>d1czan4 c.55.1.3 (N:671-913) Mammalian type I hexokinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=13.45 E-value=1.6e+02 Score=27.49 Aligned_cols=55 Identities=7% Similarity=-0.017 Sum_probs=38.9
Q ss_pred EeChHHHHHHHHHHHHHHhhCCCCCC-----------CCCHHHHHHHhhcCCCHHHHHHHHHHccC
Q psy7139 711 TLDHDYNFRMLSHILNLVDSNSWSAD-----------QIDRTETKVTLEALVPAEIVDFLFDHYMV 765 (876)
Q Consensus 711 LLSpsYLtrILdlILtlIdeESWsLd-----------kVpldetvEALee~yPreVIEhVLrkYGt 765 (876)
++|--|+.+++.++|..+..+++-+. .++-..+.+...+..+...++++++.||.
T Consensus 74 miSG~YLGElvRlil~~l~~~~~lf~~~~~~~l~~~~~l~t~~ls~i~~d~~~~~~~~~i~~~~~~ 139 (243)
T d1czan4 74 MISGMYLGEIVRNILIDFTKKGFLFRGQISETLKTRGIFETKFLSQIESDRLALLQVRAILQQLGL 139 (243)
T ss_dssp GTSTTTHHHHHHHHHHHHHHTTSSGGGCCCTTTTSTTCSCHHHHHHHTCSSCCHHHHHHHHHHHTC
T ss_pred HHccccHHHHHHHHHHHHHhcccccCCCCcHHHcCCCCcccHHHHHHHcCCchHHHHHHHHHHhCC
Confidence 44568999999999998887765322 23444455544556677778999999975
No 3
>d1e42a2 d.105.1.1 (A:825-937) Beta2-adaptin AP2, C-terminal subdomain {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.95 E-value=67 Score=27.72 Aligned_cols=22 Identities=27% Similarity=0.517 Sum_probs=17.2
Q ss_pred hcCCCCCCCHHHHHHHHHHhCCC
Q psy7139 794 LLRPTEKFILNDFLTVWQASVPE 816 (876)
Q Consensus 794 LLraa~KfnLEEFMEtWKsSVPE 816 (876)
|+...++|+-+.|+++||+. |+
T Consensus 1 lf~EdG~mdr~~Fl~~Wk~I-p~ 22 (113)
T d1e42a2 1 LFVEDGKMERQVFLATWKDI-PN 22 (113)
T ss_dssp GBCSSCCCCHHHHHHHHHHS-CG
T ss_pred CccccCeeCHHHHHHHHhcC-ch
Confidence 34556789999999999974 54
No 4
>d2sasa_ a.39.1.5 (A:) Sarcoplasmic calcium-binding protein {Amphioxus (Branchiostoma lanceolatum) [TaxId: 7740]}
Probab=10.92 E-value=1.8e+02 Score=23.87 Aligned_cols=66 Identities=11% Similarity=0.075 Sum_probs=38.0
Q ss_pred HHHHHHHHHHHHhhCCCCCCCCCHHHHHHHhhc-CCCHHHHHHHHHHccCccccccCCCCCCeEEechhHHHHHHHHHhc
Q psy7139 717 NFRMLSHILNLVDSNSWSADQIDRTETKVTLEA-LVPAEIVDFLFDHYMVESTDKTNQNGEPYYCLIEDKICRVIGEALL 795 (876)
Q Consensus 717 LtrILdlILtlIdeESWsLdkVpldetvEALee-~yPreVIEhVLrkYGtpS~~k~~ddGd~~wkLDEdKICRwfAiqLL 795 (876)
....+..++..++.++= ..|+.+++...+.. +++.+.+.++++.|-.
T Consensus 103 ~~~~~~~~F~~~D~d~~--G~Is~~E~~~~l~~~~l~~~~~~~~f~~~D~------------------------------ 150 (185)
T d2sasa_ 103 CQNRIPFLFKGMDVSGD--GIVDLEEFQNYCKNFQLQCADVPAVYNVITD------------------------------ 150 (185)
T ss_dssp HHHHHHHHHHHHCTTSS--SCCCHHHHHHHTTSSCCCCSSHHHHHHHHHT------------------------------
T ss_pred HHHHHHHHHHHHccCCC--ccCCHHHHHHHHHHcCCCHHHHHHHHHHcCC------------------------------
Confidence 33456666777666441 24777777776653 3444455555554422
Q ss_pred CCCCCCCHHHHHHHHHHhC
Q psy7139 796 RPTEKFILNDFLTVWQASV 814 (876)
Q Consensus 796 raa~KfnLEEFMEtWKsSV 814 (876)
...++++++||...|++-+
T Consensus 151 d~dG~i~~~EF~~~~~~f~ 169 (185)
T d2sasa_ 151 GGKVTFDLNRYKELYYRLL 169 (185)
T ss_dssp TTTSCCSHHHHHHHHHHHH
T ss_pred CCCCCCcHHHHHHHHHHHh
Confidence 2235678888887777644
No 5
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}
Probab=10.90 E-value=1.3e+02 Score=25.85 Aligned_cols=60 Identities=17% Similarity=0.198 Sum_probs=37.8
Q ss_pred cCEEEEeC---hHHHHHHHHHHHHHHhhCCCCCCCCCH-------HHHHHHhhc--CCCHHHH---HHHHHHccC
Q psy7139 706 PGYIRTLD---HDYNFRMLSHILNLVDSNSWSADQIDR-------TETKVTLEA--LVPAEIV---DFLFDHYMV 765 (876)
Q Consensus 706 DGywRLLS---psYLtrILdlILtlIdeESWsLdkVpl-------detvEALee--~yPreVI---EhVLrkYGt 765 (876)
.|+-..++ |.++..+...+-..+..++|+++.|+. ..+++.+.+ ++|++-+ ..+|+.||.
T Consensus 28 ~g~~~~l~~~~p~~i~~~~~~i~~~l~~~g~~~~did~~~~Hq~~~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN 102 (148)
T d1u0ma2 28 TGFHFLLDKRVPATMEPLAPALKELAGEHGWDASDLDFYIVHAGGPRILDDLSTFLEVDPHAFRFSRATLTEYGN 102 (148)
T ss_dssp TEEEEEECTTTGGGHHHHHHHHHHHHHTTSCCSSCCSCCEEECSHHHHHHHHHHHSCSCGGGGHHHHHHHHHTCB
T ss_pred CeEEEEEecccchHHHHHHHHHHHHHHHhCCCHHHCCEEEECCCCHHHHHHHHHHhCCChhhhhHHHHHHHhcCC
Confidence 34444554 456777888888888899999998872 223333322 3555533 347888886
No 6
>d3blza1 d.17.4.14 (A:3-126) Uncharacterized protein Sbal0622 {Shewanella baltica [TaxId: 62322]}
Probab=10.38 E-value=42 Score=27.35 Aligned_cols=16 Identities=19% Similarity=0.277 Sum_probs=12.2
Q ss_pred eeEEEcCEEEEeChHH
Q psy7139 701 RFLLFPGYIRTLDHDY 716 (876)
Q Consensus 701 ~~cEIDGywRLLSpsY 716 (876)
.|+.+||.|++++-.|
T Consensus 104 ~lvK~dG~WkI~~r~~ 119 (124)
T d3blza1 104 NLLKVEGKWTVVSKIY 119 (124)
T ss_dssp EEEEETTEEEEEEEEE
T ss_pred EEEEECCEEEEEEEEE
Confidence 4567899999987544
No 7
>d2pq3a1 a.39.1.5 (A:3-75) Calmodulin {Rattus norvegicus [TaxId: 10116]}
Probab=7.99 E-value=1.7e+02 Score=21.78 Aligned_cols=27 Identities=7% Similarity=0.017 Sum_probs=14.8
Q ss_pred CCHHHHHHHhh---cCCCHHHHHHHHHHcc
Q psy7139 738 IDRTETKVTLE---ALVPAEIVDFLFDHYM 764 (876)
Q Consensus 738 VpldetvEALe---e~yPreVIEhVLrkYG 764 (876)
|+..++..+|. ..++...+..+++.+-
T Consensus 25 I~~~el~~~l~~~g~~~s~~~~~~~~~~~D 54 (73)
T d2pq3a1 25 ITTKELGTVMRSLGQNPTEAELQDMINEVD 54 (73)
T ss_dssp EEGGGHHHHHHHTTCCCCHHHHHHHHHHHC
T ss_pred EeHHHHHHHHHHhCCCCCHHHHHHHHHHhC
Confidence 44444444443 2456666666666663
No 8
>d1mbya_ d.223.1.1 (A:) Serine/threonine-protein kinase Sak C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=7.86 E-value=1.2e+02 Score=24.84 Aligned_cols=33 Identities=21% Similarity=0.319 Sum_probs=25.6
Q ss_pred eeEEEeCCCCCcEEEEecCCCCcccHHHHHHHHHh
Q psy7139 827 GLAFVRQSSKPVVVQYFPEVNLSEDIKTRIDQLFQ 861 (876)
Q Consensus 827 GlALVd~sSsp~tIrYFpesDLP~DPkERFkeLFk 861 (876)
|+-|. .+.+...+|=..++||.-+++|+..|=+
T Consensus 36 ~I~Yt--~~~G~~~~y~~~d~LP~~vreKL~~lp~ 68 (75)
T d1mbya_ 36 SISYT--SPDGQTTRYGENEKLPEYIKQKLQLLSS 68 (75)
T ss_dssp EEEEE--CTTSCEEEEETTSCCCHHHHHHHTTTCC
T ss_pred eEEEE--CCCCceeecCccccccHHHHHHHhhhHH
Confidence 44444 4667788888889999999999987733
No 9
>d1tiza_ a.39.1.5 (A:) Calmodulin-related protein T21P5.17 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=7.67 E-value=1.7e+02 Score=21.42 Aligned_cols=26 Identities=12% Similarity=0.101 Sum_probs=13.6
Q ss_pred CCHHHHHHHhh---cCCCHHHHHHHHHHc
Q psy7139 738 IDRTETKVTLE---ALVPAEIVDFLFDHY 763 (876)
Q Consensus 738 VpldetvEALe---e~yPreVIEhVLrkY 763 (876)
|+..++..++. ...+...++.+++.|
T Consensus 18 I~~~El~~~l~~lg~~~~~~~i~~~~~~~ 46 (67)
T d1tiza_ 18 LSLDEFREVALAFSPYFTQEDIVKFFEEI 46 (67)
T ss_dssp EEHHHHHHHHHHTCTTSCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHhccccchHHHHHHHHHh
Confidence 55555555443 235555555555555
No 10
>d1mb6a_ g.3.6.2 (A:) Huwentoxin-IV {Chinese bird spider (Selenocosmia huwena) [TaxId: 29017]}
Probab=7.49 E-value=60 Score=23.20 Aligned_cols=13 Identities=54% Similarity=0.999 Sum_probs=9.5
Q ss_pred CCCCCcccccccc
Q psy7139 81 LCPPSNQQCIEMS 93 (876)
Q Consensus 81 ~~~~~~~~~~~~~ 93 (876)
-|.|||.||-.-|
T Consensus 8 ~cnpsndqcck~s 20 (35)
T d1mb6a_ 8 ACNPSNDQCCKSS 20 (35)
T ss_dssp BCCSSSCCBCTTT
T ss_pred ccCCCcccccccc
Confidence 4888888886544
Done!