Query psy7140
Match_columns 1304
No_of_seqs 691 out of 5477
Neff 8.8
Searched_HMMs 29240
Date Fri Aug 16 19:13:30 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7140.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7140hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3d2f_A Heat shock protein homo 100.0 6E-102 2E-106 970.9 69.9 646 559-1206 1-652 (675)
2 4b9q_A Chaperone protein DNAK; 100.0 3.3E-90 1.1E-94 860.7 68.9 589 560-1180 2-604 (605)
3 2kho_A Heat shock protein 70; 100.0 4.4E-89 1.5E-93 850.5 60.2 589 560-1180 2-604 (605)
4 1yuw_A Heat shock cognate 71 k 100.0 1.3E-83 4.4E-88 794.1 49.7 545 557-1121 1-553 (554)
5 3d2f_A Heat shock protein homo 100.0 1.9E-75 6.4E-80 731.5 54.4 470 1-515 2-474 (675)
6 2v7y_A Chaperone protein DNAK; 100.0 1E-73 3.6E-78 701.1 53.0 499 560-1111 2-509 (509)
7 4b9q_A Chaperone protein DNAK; 100.0 1E-73 3.6E-78 712.2 51.5 459 1-515 1-469 (605)
8 1yuw_A Heat shock cognate 71 k 100.0 6.8E-73 2.3E-77 698.6 49.9 467 2-518 5-474 (554)
9 2kho_A Heat shock protein 70; 100.0 6.1E-72 2.1E-76 696.3 45.3 458 2-515 3-469 (605)
10 2v7y_A Chaperone protein DNAK; 100.0 3.2E-66 1.1E-70 634.7 48.4 432 2-515 3-438 (509)
11 3i33_A Heat shock-related 70 k 100.0 1.9E-59 6.4E-64 562.6 46.4 380 1-415 23-403 (404)
12 3i33_A Heat shock-related 70 k 100.0 8.8E-59 3E-63 556.8 47.1 382 558-944 21-403 (404)
13 3qfu_A 78 kDa glucose-regulate 100.0 8.9E-58 3E-62 546.9 46.2 375 2-414 19-394 (394)
14 4gni_A Putative heat shock pro 100.0 5.9E-58 2E-62 549.9 43.1 379 1-417 13-405 (409)
15 3qfu_A 78 kDa glucose-regulate 100.0 2.3E-57 7.7E-62 543.4 46.7 376 560-943 18-394 (394)
16 4gni_A Putative heat shock pro 100.0 2.1E-57 7E-62 545.2 43.4 379 560-946 13-405 (409)
17 1dkg_D Molecular chaperone DNA 100.0 6.1E-56 2.1E-60 528.2 41.7 372 2-414 3-383 (383)
18 1dkg_D Molecular chaperone DNA 100.0 9.7E-56 3.3E-60 526.4 43.0 373 560-943 2-383 (383)
19 1jce_A ROD shape-determining p 100.0 4.4E-38 1.5E-42 368.3 24.5 311 2-414 4-327 (344)
20 1jce_A ROD shape-determining p 100.0 1.8E-37 6.2E-42 363.1 24.8 312 560-943 3-327 (344)
21 4e81_A Chaperone protein DNAK; 100.0 1.9E-29 6.5E-34 268.6 23.1 210 952-1180 2-216 (219)
22 1u00_A HSC66, chaperone protei 100.0 5.6E-28 1.9E-32 260.5 23.9 209 954-1181 1-214 (227)
23 2fsj_A Hypothetical protein TA 99.9 2.2E-26 7.6E-31 267.1 15.4 229 142-411 95-343 (346)
24 2ych_A Competence protein PILM 99.9 6.6E-25 2.3E-29 260.0 16.4 317 3-411 15-373 (377)
25 2fsj_A Hypothetical protein TA 99.9 2.5E-25 8.5E-30 258.3 11.4 227 671-940 95-343 (346)
26 2ych_A Competence protein PILM 99.9 7E-25 2.4E-29 259.8 14.6 318 561-940 14-373 (377)
27 3h1q_A Ethanolamine utilizatio 99.9 2.5E-23 8.6E-28 234.7 26.1 203 145-410 70-272 (272)
28 3h1q_A Ethanolamine utilizatio 99.9 5.7E-23 1.9E-27 231.8 24.3 203 674-939 70-272 (272)
29 1k8k_A ARP3, actin-like protei 99.9 2.6E-23 8.8E-28 249.4 18.2 228 167-412 107-387 (418)
30 4a2a_A Cell division protein F 99.9 2.1E-22 7.3E-27 238.4 22.7 199 181-412 168-393 (419)
31 2fxu_A Alpha-actin-1, actin, a 99.9 5.8E-23 2E-27 242.2 17.2 214 168-411 101-348 (375)
32 3n8e_A Stress-70 protein, mito 99.9 4.8E-23 1.7E-27 211.4 14.0 160 949-1122 18-182 (182)
33 1k8k_A ARP3, actin-like protei 99.9 3.2E-22 1.1E-26 239.9 18.1 227 696-940 107-386 (418)
34 4a2a_A Cell division protein F 99.9 1.3E-21 4.5E-26 231.6 21.2 200 710-942 168-394 (419)
35 2fxu_A Alpha-actin-1, actin, a 99.9 1.3E-21 4.4E-26 230.7 14.7 307 561-940 6-348 (375)
36 2zgy_A Plasmid segregation pro 99.8 7.5E-21 2.6E-25 219.2 14.9 226 140-410 72-319 (320)
37 3h0x_A 78 kDa glucose-regulate 99.8 7.1E-20 2.4E-24 183.3 12.2 146 953-1111 2-152 (152)
38 3dob_A Heat shock 70 kDa prote 99.8 8.4E-20 2.9E-24 182.3 10.2 146 953-1111 2-152 (152)
39 2zgy_A Plasmid segregation pro 99.8 5E-20 1.7E-24 212.2 9.3 227 669-939 72-319 (320)
40 3dqg_A Heat shock 70 kDa prote 99.8 6.9E-20 2.4E-24 182.7 7.7 145 953-1111 2-151 (151)
41 2op6_A Heat shock 70 kDa prote 99.8 1.6E-18 5.3E-23 175.1 10.9 146 953-1111 2-152 (152)
42 4ehu_A Activator of 2-hydroxyi 99.7 4.8E-16 1.6E-20 175.2 22.2 217 146-414 37-256 (276)
43 1k8k_B ARP2, actin-like protei 99.7 5.5E-18 1.9E-22 200.5 6.4 214 168-412 105-364 (394)
44 4ehu_A Activator of 2-hydroxyi 99.7 2.4E-15 8.1E-20 169.5 21.0 181 721-943 68-256 (276)
45 1k8k_B ARP2, actin-like protei 99.7 2.6E-17 9E-22 194.7 4.7 216 697-940 105-363 (394)
46 3js6_A Uncharacterized PARM pr 99.6 1.5E-15 5E-20 175.9 15.0 208 169-415 115-339 (355)
47 3js6_A Uncharacterized PARM pr 99.6 2.8E-15 9.5E-20 173.6 14.6 209 697-944 114-339 (355)
48 4apw_A ALP12; actin-like prote 99.5 1.7E-14 5.7E-19 165.9 8.1 204 168-413 106-325 (329)
49 4apw_A ALP12; actin-like prote 99.4 9.2E-14 3.1E-18 159.7 6.6 203 697-941 106-324 (329)
50 1q5l_A Chaperone protein DNAK; 99.4 1.2E-12 4.2E-17 128.0 10.1 113 948-1072 14-131 (135)
51 3qb0_A Actin-related protein 4 99.3 4.1E-11 1.4E-15 142.9 18.9 112 146-275 93-208 (498)
52 3dwl_A Actin-related protein 3 99.3 2.3E-12 7.9E-17 152.5 7.1 244 146-412 103-396 (427)
53 3dwl_A Actin-related protein 3 99.2 4.6E-12 1.6E-16 149.9 6.6 224 697-940 124-395 (427)
54 3qb0_A Actin-related protein 4 99.2 7.2E-11 2.5E-15 140.7 15.0 178 561-805 24-209 (498)
55 3lof_A Heat shock 70 kDa prote 99.2 1.4E-10 4.7E-15 110.3 11.1 82 1099-1181 3-85 (113)
56 2d0o_A DIOL dehydratase-reacti 99.1 6.1E-11 2.1E-15 136.6 9.4 196 181-411 368-603 (610)
57 1nbw_A Glycerol dehydratase re 99.1 1.4E-10 4.8E-15 134.2 8.7 193 183-410 372-604 (607)
58 2d0o_A DIOL dehydratase-reacti 99.1 2.6E-10 9E-15 131.4 9.6 196 711-941 369-604 (610)
59 1nbw_A Glycerol dehydratase re 99.0 2.6E-10 8.9E-15 132.1 6.7 203 699-940 363-605 (607)
60 3dob_A Heat shock 70 kDa prote 99.0 6.7E-10 2.3E-14 110.8 7.7 79 424-515 2-80 (152)
61 3dqg_A Heat shock 70 kDa prote 99.0 6.6E-10 2.3E-14 110.7 7.6 79 424-515 2-80 (151)
62 4fo0_A Actin-related protein 8 98.9 5.5E-08 1.9E-12 121.7 24.6 108 154-276 179-293 (593)
63 3h0x_A 78 kDa glucose-regulate 98.9 8.7E-10 3E-14 110.1 6.5 79 424-515 2-80 (152)
64 4fo0_A Actin-related protein 8 98.9 8.8E-08 3E-12 119.8 24.9 120 698-838 200-321 (593)
65 4e81_A Chaperone protein DNAK; 98.9 2.5E-09 8.6E-14 113.7 8.7 79 423-514 2-80 (219)
66 3n8e_A Stress-70 protein, mito 98.9 1.5E-09 5.3E-14 111.2 6.2 82 421-515 19-100 (182)
67 2p32_A Heat shock 70 kDa prote 98.9 2.6E-09 8.8E-14 102.5 7.1 80 1100-1180 13-93 (120)
68 1q5l_A Chaperone protein DNAK; 98.8 3E-09 1E-13 103.9 6.7 84 419-515 14-97 (135)
69 2op6_A Heat shock 70 kDa prote 98.7 1.3E-08 4.3E-13 102.5 7.4 79 424-515 2-80 (152)
70 1ud0_A HSC70, 70 kDa heat-shoc 98.7 7.9E-09 2.7E-13 98.3 5.0 78 1103-1181 2-80 (113)
71 1u00_A HSC66, chaperone protei 98.6 2.2E-08 7.4E-13 107.7 6.0 78 425-515 1-78 (227)
72 1hux_A Activator of (R)-2-hydr 98.5 8.4E-06 2.9E-10 90.4 21.9 48 366-413 210-257 (270)
73 1hux_A Activator of (R)-2-hydr 98.4 6.8E-05 2.3E-09 83.1 25.5 73 866-942 185-257 (270)
74 4am6_A Actin-like protein ARP8 97.5 0.00036 1.2E-08 83.9 11.6 95 168-276 222-317 (655)
75 4am6_A Actin-like protein ARP8 97.3 0.00059 2E-08 82.1 10.9 123 697-839 222-346 (655)
76 2ews_A Pantothenate kinase; PA 96.7 0.012 4.1E-07 64.8 12.9 75 860-939 207-286 (287)
77 2i7n_A Pantothenate kinase 1; 96.1 0.033 1.1E-06 63.0 12.2 45 366-410 307-358 (360)
78 2ews_A Pantothenate kinase; PA 96.0 0.04 1.4E-06 60.6 12.5 75 331-410 207-286 (287)
79 2i7n_A Pantothenate kinase 1; 95.9 0.023 7.8E-07 64.2 10.3 45 895-939 307-358 (360)
80 3vov_A Glucokinase, hexokinase 95.8 0.54 1.8E-05 52.5 21.0 43 193-242 98-140 (302)
81 1t6c_A Exopolyphosphatase; alp 95.7 0.09 3.1E-06 59.0 14.0 78 183-270 100-177 (315)
82 1t6c_A Exopolyphosphatase; alp 95.5 0.15 5.1E-06 57.2 14.7 77 713-799 101-177 (315)
83 2ivn_A O-sialoglycoprotein end 95.5 4.5 0.00015 45.5 28.6 63 347-414 232-300 (330)
84 2e2o_A Hexokinase; acetate and 95.2 4.7 0.00016 44.6 26.7 47 894-941 240-287 (299)
85 2e2o_A Hexokinase; acetate and 95.2 3.6 0.00012 45.5 25.2 47 365-412 240-287 (299)
86 2ivn_A O-sialoglycoprotein end 95.2 2 7E-05 48.4 23.0 65 872-941 228-298 (330)
87 3vgl_A Glucokinase; ROK family 94.8 1.5 5.1E-05 49.4 20.7 68 166-243 56-139 (321)
88 3l0q_A Xylulose kinase; xlylul 94.7 0.037 1.3E-06 67.8 7.4 84 859-946 408-494 (554)
89 4bc3_A Xylulose kinase; transf 94.3 0.053 1.8E-06 66.1 7.6 77 866-943 407-483 (538)
90 3lof_A Heat shock 70 kDa prote 94.3 0.091 3.1E-06 49.2 7.4 76 1183-1274 6-81 (113)
91 3hz6_A Xylulokinase; xylulose, 94.3 0.057 1.9E-06 65.4 7.6 80 861-946 375-455 (511)
92 3l0q_A Xylulose kinase; xlylul 94.3 0.053 1.8E-06 66.4 7.4 82 330-416 408-493 (554)
93 2itm_A Xylulose kinase, xylulo 94.2 0.041 1.4E-06 66.3 6.2 53 893-945 386-438 (484)
94 2zf5_O Glycerol kinase; hypert 94.2 0.06 2E-06 65.1 7.5 76 868-945 369-444 (497)
95 3vgl_A Glucokinase; ROK family 94.2 4.9 0.00017 45.0 23.1 44 722-772 96-139 (321)
96 4db3_A Glcnac kinase, N-acetyl 94.2 8 0.00027 43.4 24.8 46 894-939 270-324 (327)
97 3ll3_A Gluconate kinase; xylul 94.1 0.06 2.1E-06 65.1 7.2 78 861-945 364-444 (504)
98 4bc3_A Xylulose kinase; transf 94.0 0.075 2.6E-06 64.8 8.0 75 340-415 410-484 (538)
99 4htl_A Beta-glucoside kinase; 94.0 1.2 4.1E-05 49.5 17.3 48 365-412 238-291 (297)
100 3vov_A Glucokinase, hexokinase 94.0 4.7 0.00016 44.7 22.2 47 894-940 238-294 (302)
101 4db3_A Glcnac kinase, N-acetyl 93.9 2 6.7E-05 48.5 19.2 46 365-410 270-324 (327)
102 3hz6_A Xylulokinase; xylulose, 93.8 0.073 2.5E-06 64.4 7.4 79 332-416 375-454 (511)
103 3i8b_A Xylulose kinase; strain 93.8 0.051 1.7E-06 65.8 5.8 79 861-944 395-474 (515)
104 2itm_A Xylulose kinase, xylulo 93.7 0.055 1.9E-06 65.2 5.9 80 332-415 357-437 (484)
105 2ch5_A NAGK protein; transfera 93.6 12 0.0004 42.3 25.7 46 166-211 70-118 (347)
106 2zf5_O Glycerol kinase; hypert 93.6 0.09 3.1E-06 63.5 7.5 79 332-416 365-444 (497)
107 3ll3_A Gluconate kinase; xylul 93.5 0.083 2.8E-06 63.8 7.1 80 332-416 364-444 (504)
108 3r8e_A Hypothetical sugar kina 93.5 0.5 1.7E-05 53.3 13.1 47 365-411 261-318 (321)
109 3i8b_A Xylulose kinase; strain 93.2 0.071 2.4E-06 64.5 5.8 79 332-415 395-474 (515)
110 3jvp_A Ribulokinase; PSI-II, N 93.2 0.082 2.8E-06 65.0 6.4 77 861-944 410-490 (572)
111 3g25_A Glycerol kinase; IDP007 93.1 0.073 2.5E-06 64.3 5.7 82 861-946 374-456 (501)
112 3ezw_A Glycerol kinase; glycer 93.0 0.13 4.4E-06 62.6 7.7 83 331-417 371-454 (526)
113 3eno_A Putative O-sialoglycopr 92.9 5.5 0.00019 44.8 20.5 67 344-415 234-306 (334)
114 3ifr_A Carbohydrate kinase, FG 92.9 0.074 2.5E-06 64.3 5.3 53 893-946 400-452 (508)
115 4e1j_A Glycerol kinase; struct 92.8 0.065 2.2E-06 65.0 4.6 53 893-946 425-477 (520)
116 3ezw_A Glycerol kinase; glycer 92.8 0.13 4.3E-06 62.6 7.1 67 876-946 388-454 (526)
117 4htl_A Beta-glucoside kinase; 92.8 6 0.0002 43.7 20.5 48 894-941 238-291 (297)
118 3h3n_X Glycerol kinase; ATP-bi 92.7 0.086 2.9E-06 63.8 5.5 53 893-946 403-455 (506)
119 2qm1_A Glucokinase; alpha-beta 92.7 5 0.00017 44.9 20.1 48 365-412 263-321 (326)
120 2dpn_A Glycerol kinase; thermu 92.6 0.14 4.7E-06 61.9 7.1 80 861-944 368-448 (495)
121 3g25_A Glycerol kinase; IDP007 92.4 0.11 3.6E-06 62.9 5.8 82 332-417 374-456 (501)
122 3jvp_A Ribulokinase; PSI-II, N 92.4 0.11 3.7E-06 63.9 5.9 79 332-415 410-490 (572)
123 2p3r_A Glycerol kinase; glycer 92.3 0.086 3E-06 63.8 4.7 53 893-946 401-453 (510)
124 2gup_A ROK family protein; sug 92.2 6.8 0.00023 43.1 20.1 48 365-412 228-287 (292)
125 3r8e_A Hypothetical sugar kina 92.2 4.5 0.00016 45.3 18.7 47 894-940 261-318 (321)
126 2dpn_A Glycerol kinase; thermu 92.1 0.18 6.1E-06 60.8 7.2 80 332-415 368-448 (495)
127 4e1j_A Glycerol kinase; struct 92.0 0.091 3.1E-06 63.7 4.4 82 332-416 393-476 (520)
128 3h3n_X Glycerol kinase; ATP-bi 92.0 0.22 7.5E-06 60.1 7.8 81 332-416 373-454 (506)
129 3ifr_A Carbohydrate kinase, FG 91.9 0.11 3.7E-06 62.9 4.9 80 332-416 371-451 (508)
130 2qm1_A Glucokinase; alpha-beta 91.8 11 0.00038 42.0 21.6 47 895-941 264-321 (326)
131 2d4w_A Glycerol kinase; alpha 91.7 0.13 4.4E-06 62.2 5.4 81 861-945 373-454 (504)
132 2p3r_A Glycerol kinase; glycer 91.7 0.11 3.7E-06 62.9 4.6 81 332-416 371-452 (510)
133 2d4w_A Glycerol kinase; alpha 91.4 0.27 9.1E-06 59.4 7.7 80 332-415 373-453 (504)
134 2w40_A Glycerol kinase, putati 91.3 0.15 5.2E-06 61.6 5.4 50 895-945 409-458 (503)
135 1zc6_A Probable N-acetylglucos 90.9 22 0.00075 39.2 24.3 64 868-940 227-292 (305)
136 3eno_A Putative O-sialoglycopr 90.8 13 0.00046 41.6 20.5 68 872-944 233-306 (334)
137 2w40_A Glycerol kinase, putati 90.8 0.34 1.2E-05 58.5 7.8 81 332-416 376-458 (503)
138 1woq_A Inorganic polyphosphate 90.8 9.1 0.00031 41.4 18.8 44 193-242 114-157 (267)
139 2uyt_A Rhamnulokinase; rhamnos 90.7 0.18 6.2E-06 60.7 5.2 47 893-941 393-439 (489)
140 1u6z_A Exopolyphosphatase; alp 90.1 2.9 9.9E-05 50.2 15.0 74 715-799 102-176 (513)
141 2uyt_A Rhamnulokinase; rhamnos 89.7 0.24 8.3E-06 59.6 5.2 78 330-412 361-439 (489)
142 3mdq_A Exopolyphosphatase; str 89.4 4.7 0.00016 44.9 15.2 78 183-269 92-169 (315)
143 2hoe_A N-acetylglucosamine kin 89.3 6.6 0.00023 45.1 16.9 47 365-411 315-370 (380)
144 2p32_A Heat shock 70 kDa prote 89.3 0.71 2.4E-05 43.5 7.0 78 1181-1274 13-90 (120)
145 2ap1_A Putative regulator prot 88.8 20 0.00067 40.1 20.1 44 722-772 120-163 (327)
146 2ap1_A Putative regulator prot 88.6 20 0.00068 40.0 19.9 43 193-242 120-162 (327)
147 2gup_A ROK family protein; sug 88.3 33 0.0011 37.4 22.6 47 895-941 229-287 (292)
148 3cer_A Possible exopolyphospha 87.2 1.7 5.8E-05 49.2 9.7 82 183-270 105-191 (343)
149 1ud0_A HSC70, 70 kDa heat-shoc 86.9 1.4 4.9E-05 40.9 7.4 73 1186-1274 4-76 (113)
150 3bex_A Type III pantothenate k 86.1 4.3 0.00015 43.5 11.7 21 2-22 4-24 (249)
151 2ch5_A NAGK protein; transfera 85.3 52 0.0018 36.8 30.4 68 673-740 45-118 (347)
152 3mdq_A Exopolyphosphatase; str 85.1 1.7 5.6E-05 48.7 8.1 76 714-799 94-170 (315)
153 3h6e_A Carbohydrate kinase, FG 83.6 0.67 2.3E-05 55.3 4.3 72 866-942 362-436 (482)
154 1u6z_A Exopolyphosphatase; alp 81.8 5.3 0.00018 47.9 11.2 76 184-270 100-176 (513)
155 3cer_A Possible exopolyphospha 80.6 4.9 0.00017 45.4 9.7 80 714-799 107-191 (343)
156 3h6e_A Carbohydrate kinase, FG 79.8 1 3.5E-05 53.7 4.0 47 366-413 389-436 (482)
157 3hi0_A Putative exopolyphospha 78.8 8.6 0.0003 45.9 11.6 74 183-268 103-177 (508)
158 1iv0_A Hypothetical protein; r 72.9 2.3 8E-05 38.2 3.4 21 1-21 1-21 (98)
159 3ven_A O-carbamoyltransferase 69.8 76 0.0026 38.0 16.4 65 347-416 295-361 (576)
160 3epq_A Putative fructokinase; 66.5 23 0.00078 39.1 10.5 43 193-242 97-139 (302)
161 3hi0_A Putative exopolyphospha 65.8 12 0.00043 44.6 8.7 74 713-798 104-178 (508)
162 1iv0_A Hypothetical protein; r 63.2 4.7 0.00016 36.3 3.2 21 560-580 1-21 (98)
163 3en9_A Glycoprotease, O-sialog 62.7 2.5E+02 0.0086 33.4 26.5 41 872-917 232-272 (540)
164 3en9_A Glycoprotease, O-sialog 61.0 2.7E+02 0.0091 33.2 26.1 185 166-389 72-273 (540)
165 3aap_A Ectonucleoside triphosp 59.2 10 0.00035 42.9 6.0 19 754-772 139-157 (353)
166 1vhx_A Putative holliday junct 58.9 4.8 0.00016 39.4 2.7 20 1-20 3-22 (150)
167 1vhx_A Putative holliday junct 58.2 5.9 0.0002 38.7 3.3 21 560-580 3-23 (150)
168 4g9i_A Hydrogenase maturation 56.3 24 0.00082 44.2 9.1 64 875-943 692-761 (772)
169 3mcp_A Glucokinase; structural 55.4 46 0.0016 37.7 10.6 48 193-242 108-163 (366)
170 3aap_A Ectonucleoside triphosp 54.2 17 0.00058 41.1 6.7 49 194-243 108-157 (353)
171 1woq_A Inorganic polyphosphate 54.1 1.2E+02 0.0042 32.2 13.6 45 722-772 114-158 (267)
172 3uun_A Dystrophin; triple heli 53.0 1.3E+02 0.0044 27.1 12.7 88 1133-1238 3-98 (119)
173 3mcp_A Glucokinase; structural 52.4 48 0.0016 37.5 10.1 18 561-578 10-27 (366)
174 2hoe_A N-acetylglucosamine kin 51.8 96 0.0033 35.2 12.8 47 894-940 315-370 (380)
175 3ttc_A HYPF, transcriptional r 51.2 40 0.0014 41.2 9.6 65 872-941 583-651 (657)
176 1z05_A Transcriptional regulat 49.7 66 0.0023 37.3 11.1 44 193-243 208-251 (429)
177 3s84_A Apolipoprotein A-IV; fo 49.1 1.5E+02 0.0051 31.8 12.8 19 1254-1272 229-247 (273)
178 3qbx_A Anhydro-N-acetylmuramic 49.0 27 0.00093 39.3 7.1 70 867-941 260-336 (371)
179 1z05_A Transcriptional regulat 48.7 83 0.0028 36.4 11.8 44 722-772 208-251 (429)
180 3cqy_A Anhydro-N-acetylmuramic 48.5 31 0.0011 38.8 7.4 70 866-941 266-342 (370)
181 1hjr_A Holliday junction resol 48.1 16 0.00055 35.9 4.5 19 1-19 1-19 (158)
182 2yhw_A Bifunctional UDP-N-acet 47.3 2.5E+02 0.0085 31.0 15.2 125 560-772 30-174 (343)
183 3ttc_A HYPF, transcriptional r 46.8 46 0.0016 40.6 9.2 63 345-412 585-651 (657)
184 1z6r_A MLC protein; transcript 45.8 83 0.0028 36.0 11.1 44 193-243 186-229 (406)
185 3cj1_A Ectonucleoside triphosp 45.5 31 0.0011 40.4 7.2 49 196-244 150-208 (456)
186 4g9i_A Hydrogenase maturation 45.0 43 0.0015 41.9 8.8 62 347-413 693-760 (772)
187 1z6r_A MLC protein; transcript 44.6 97 0.0033 35.5 11.5 44 722-772 186-229 (406)
188 3uul_A Utrophin; spectrin repe 44.1 1.8E+02 0.0061 26.1 14.6 88 1133-1238 3-98 (118)
189 3vth_A Hydrogenase maturation 43.6 54 0.0019 40.9 9.3 65 874-943 679-749 (761)
190 4ep4_A Crossover junction endo 42.2 9.7 0.00033 37.8 1.9 19 1-19 1-19 (166)
191 3cj1_A Ectonucleoside triphosp 41.6 30 0.001 40.4 6.3 20 754-773 189-208 (456)
192 1nu0_A Hypothetical protein YQ 41.6 23 0.00078 34.0 4.3 20 2-21 4-23 (138)
193 1quu_A Human skeletal muscle a 40.9 3.3E+02 0.011 28.4 15.2 43 1222-1265 133-175 (250)
194 1nu0_A Hypothetical protein YQ 40.5 19 0.00066 34.5 3.6 20 561-580 4-23 (138)
195 3qbx_A Anhydro-N-acetylmuramic 40.4 57 0.0019 36.7 7.9 49 364-412 283-336 (371)
196 3vth_A Hydrogenase maturation 39.8 39 0.0013 42.1 7.2 62 348-414 682-749 (761)
197 3r6n_A Desmoplakin; spectrin r 36.5 1.4E+02 0.0048 34.7 10.8 127 1138-1270 8-144 (450)
198 3cet_A Conserved archaeal prot 36.5 31 0.001 38.2 4.9 71 331-409 243-321 (334)
199 3kbt_A Beta-I spectrin, spectr 36.1 2.7E+02 0.0093 30.3 13.1 23 1219-1241 218-240 (326)
200 3zx3_A Ectonucleoside triphosp 35.7 49 0.0017 38.5 6.7 47 196-244 150-199 (452)
201 3uul_A Utrophin; spectrin repe 35.5 62 0.0021 29.4 6.4 25 1219-1243 3-27 (118)
202 2nr5_A Hypothetical protein SO 34.5 96 0.0033 23.4 5.6 23 1130-1152 42-64 (67)
203 2l7b_A Apolipoprotein E, APO-E 34.4 1.3E+02 0.0044 33.0 9.5 138 1098-1239 111-267 (307)
204 3zx3_A Ectonucleoside triphosp 33.0 44 0.0015 38.9 5.8 44 726-773 151-199 (452)
205 3djc_A Type III pantothenate k 32.2 27 0.00092 37.6 3.5 21 2-22 3-23 (266)
206 3cqy_A Anhydro-N-acetylmuramic 31.8 77 0.0026 35.6 7.2 68 341-412 270-342 (370)
207 1hjr_A Holliday junction resol 31.4 43 0.0015 32.9 4.5 19 560-578 1-19 (158)
208 3djc_A Type III pantothenate k 31.2 29 0.00099 37.4 3.6 71 860-940 182-254 (266)
209 4ep4_A Crossover junction endo 30.1 19 0.00066 35.6 1.8 20 560-579 1-20 (166)
210 3f31_A Spectrin alpha chain, b 29.1 3.3E+02 0.011 25.8 10.7 27 1157-1183 14-40 (149)
211 3f31_A Spectrin alpha chain, b 28.9 3.8E+02 0.013 25.4 11.8 109 1106-1239 27-141 (149)
212 2dfs_A Myosin-5A; myosin-V, in 28.4 1.9E+02 0.0065 37.7 11.2 18 1105-1122 921-938 (1080)
213 3ven_A O-carbamoyltransferase 27.4 1.1E+02 0.0038 36.7 8.0 67 874-945 293-361 (576)
214 2e1z_A Propionate kinase; TDCD 27.1 3.1E+02 0.011 31.2 11.2 45 869-917 310-355 (415)
215 3o8m_A Hexokinase; rnaseh-like 26.4 1.6E+02 0.0055 34.5 9.1 29 225-253 79-108 (485)
216 3pdy_A Plectin; cytoskeleton, 26.4 5.1E+02 0.018 26.1 14.0 49 1219-1268 106-154 (210)
217 1g99_A Acetate kinase; alpha/b 26.3 2.3E+02 0.008 32.1 10.0 45 869-917 302-347 (408)
218 1hnj_A Beta-ketoacyl-acyl carr 26.0 66 0.0023 35.4 5.6 50 868-920 212-261 (317)
219 3uun_A Dystrophin; triple heli 25.7 85 0.0029 28.4 5.5 24 1219-1242 3-26 (119)
220 2e1z_A Propionate kinase; TDCD 25.6 6.4E+02 0.022 28.6 13.4 47 339-389 309-356 (415)
221 2yhx_A Hexokinase B; transfera 24.8 2.6E+02 0.0089 32.5 10.5 51 225-275 60-116 (457)
222 2aa4_A Mannac kinase, putative 23.8 78 0.0027 34.2 5.6 46 365-410 234-286 (289)
223 3bex_A Type III pantothenate k 23.4 42 0.0014 35.8 3.1 19 562-580 5-23 (249)
224 3nmd_A CGMP dependent protein 23.2 1.2E+02 0.0041 25.2 4.9 43 1087-1130 29-71 (72)
225 1hnj_A Beta-ketoacyl-acyl carr 22.8 73 0.0025 35.0 5.1 49 340-391 213-261 (317)
226 4ijn_A Acetate kinase, acetoki 22.8 1.8E+02 0.0062 32.9 8.2 45 869-917 303-348 (398)
227 2iak_A Bullous pemphigoid anti 22.7 1.4E+02 0.0047 30.9 7.0 26 1219-1244 121-146 (224)
228 3cet_A Conserved archaeal prot 22.6 44 0.0015 36.9 3.1 70 861-938 244-321 (334)
229 3s5m_A Falcilysin; M16 metallo 22.4 2.3E+02 0.008 37.4 10.5 128 1086-1235 486-629 (1193)
230 1zc6_A Probable N-acetylglucos 22.2 50 0.0017 36.2 3.6 63 340-411 228-292 (305)
231 3o8m_A Hexokinase; rnaseh-like 22.0 1.9E+02 0.0065 33.9 8.5 31 753-783 78-109 (485)
232 3lbx_B Beta-I spectrin, spectr 21.7 5.8E+02 0.02 25.0 11.7 48 1220-1268 112-159 (185)
233 2yhx_A Hexokinase B; transfera 21.4 3.1E+02 0.011 31.9 10.2 52 753-804 59-116 (457)
234 3f9m_A Glucokinase; hexokinase 21.3 2.5E+02 0.0084 32.7 9.2 52 753-807 75-135 (470)
235 1u5p_A Spectrin alpha chain, b 20.7 6.4E+02 0.022 25.2 13.7 47 1221-1268 112-158 (216)
236 1ub7_A 3-oxoacyl-[acyl-carrier 20.4 84 0.0029 34.6 5.0 48 870-920 216-263 (322)
237 2ebd_A 3-oxoacyl-[acyl-carrier 20.2 91 0.0031 34.0 5.2 47 871-920 207-253 (309)
238 2a01_A Apolipoprotein A-I; fou 20.2 65 0.0022 34.1 3.7 71 1102-1173 111-187 (243)
239 1saz_A Probable butyrate kinas 20.2 1.6E+02 0.0054 33.4 7.3 48 364-411 295-347 (381)
No 1
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=5.9e-102 Score=970.93 Aligned_cols=646 Identities=35% Similarity=0.608 Sum_probs=586.1
Q ss_pred cceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChh
Q psy7140 559 IMSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPF 638 (1304)
Q Consensus 559 ~~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~ 638 (1304)
||++||||||||||+||++.+|+++++.|+.|+|.+||+|+|.+++++||..|..+...+|.++++++||+||+.++++.
T Consensus 1 Mm~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 80 (675)
T 3d2f_A 1 MSTPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPD 80 (675)
T ss_dssp -CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTT
T ss_pred CCcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHH
Confidence 46799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHH
Q psy7140 639 VQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTA 718 (1304)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~A 718 (1304)
++.+.+++||.++..++|.+.+.+.+.++...++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++|
T Consensus 81 v~~~~~~~p~~v~~~~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae~~lg~~v~~~VITVPa~f~~~qR~a~~~A 160 (675)
T 3d2f_A 81 FEQESKHFTSKLVELDDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVKQDTKANITDVCIAVPPWYTEEQRYNIADA 160 (675)
T ss_dssp HHHHHTTCCSEEEECTTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHHhhCCeeEEEcCCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHHHHhCCCcceEEEEECCCCCHHHHHHHHHH
Confidence 99999999999998889999999888887789999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHH
Q psy7140 719 ASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKI 798 (1304)
Q Consensus 719 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~ 798 (1304)
+++|||+++++++||+|||++|++.+..++.....+.++||||+||||||+|++++.++.++|+++.++.++||++||+.
T Consensus 161 a~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dvsv~~~~~g~~~V~a~~gd~~lGG~d~D~~ 240 (675)
T 3d2f_A 161 ARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTCSIMAFKKGQLKVLGTACDKHFGGRDFDLA 240 (675)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHH
T ss_pred HHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEEEEEEecCCeEEEEEEcCCCCccHHHHHHH
Confidence 99999999999999999999999876544322245789999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHHHH
Q psy7140 799 LAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEI 878 (1304)
Q Consensus 799 l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~ 878 (1304)
|++|+..+|.+++++++..+++++.||+.+||++|+.||.+. ..++.+++++++.++..+|||++|+++|+++++++..
T Consensus 241 l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~-~~~i~i~~~~~g~~~~~~itr~~fe~l~~~l~~~i~~ 319 (675)
T 3d2f_A 241 ITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT-NAPFSVESVMNDVDVSSQLSREELEELVKPLLERVTE 319 (675)
T ss_dssp HHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS-EEEEEETTSSSSCCEEEEEEHHHHHHHTHHHHTTTTH
T ss_pred HHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC-ceEEEEeeeccCceEEEEEeHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999865 4678888888999999999999999999999999999
Q ss_pred HHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCcccceeEEEeeec
Q psy7140 879 CLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAVKIRHFDVTDVQN 958 (1304)
Q Consensus 879 ~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~~~~~~~~~d~~~ 958 (1304)
+++++|+.++++..+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++.++++++.+.|++|
T Consensus 320 ~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAa~~a~~ls~~~~v~~~~l~Dv~p 399 (675)
T 3d2f_A 320 PVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDEAIAKGAAFICAIHSPTLRVRPFKFEDIHP 399 (675)
T ss_dssp HHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTTHHHHHHHHHHHHTCSSCCCCCCEEEEEEC
T ss_pred HHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcchHHHHHHHHHHHHhCCCCcccceEEEeeee
Confidence 99999999999999999999999999999999999999999898999999999999999999999999999999999999
Q ss_pred ceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecceeEEEEEEecC--CCC-CCccceeEEeecCCCCCCCCCceEE
Q psy7140 959 YPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCP--VPY-PTQFVGQFIIKDIKPGPKGKPQKVK 1035 (1304)
Q Consensus 959 ~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~~~i~~~~~~~--~~~-~~~~i~~~~i~~i~~~~~~~~~~i~ 1035 (1304)
|+|||+|.+....+...+||++|+++|++++.+|++..++++.++|.+. ++. +|..||+|.|+||||.+.|.+.+|+
T Consensus 400 ~slgi~~~~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~~~~i~ 479 (675)
T 3d2f_A 400 YSVSYSWDKQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAASYTDITQLPPNTPEQIANWEITGVQLPEGQDSVPVK 479 (675)
T ss_dssp SCEEEEECCTTCSCSEEEEECTTEEESEEEEEEEEESSCEEEEEEESCGGGSCTTCCSEEEEEEEECCCCCSSCSCEEEE
T ss_pred cceEeeecCCCCCcceEEEEcCCCCCCcccceeeeecCCceEEEEEcCCcccccccCceeeEEEecCcCCCCCCCcceEE
Confidence 9999999753222346789999999999999999999999999988543 665 8999999999999999999876899
Q ss_pred EEEEEccceEEEEEeeeeeeccc---ccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHHHHHHH
Q psy7140 1036 VKMTVNVHGVFSVTSASMFEDLE---DQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAKNALEE 1112 (1304)
Q Consensus 1036 v~~~~d~~g~l~v~~~~~~~~~~---~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~LEs 1112 (1304)
|+|++|.||+|+|+++.++++.+ ++.+++..+++|... ..+||++++++|++++++|..+|++++++.++||+||+
T Consensus 480 v~f~id~~Gil~V~a~~~~~~~~~~~~~~t~~~~~i~i~~~-~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~~~n~le~ 558 (675)
T 3d2f_A 480 LKLRCDPSGLHTIEEAYTIEDIEAGSDTKTVKKDDLTIVAH-TFGLDAKKLNELIEKENEMLAQDKLVAETEDRKNTLEE 558 (675)
T ss_dssp EEEEECTTSCEEEEEEEEECC------CCCCEEEECEEEEE-CSSCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEEEcCCCcEEEEEEEEeecccccccccCcceeeEEEecC-CCCCCHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHHHH
Confidence 99999999999999987765321 345677778888765 24899999999999999999999999999999999999
Q ss_pred HHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHHHhhccChhHHHHHH
Q psy7140 1113 YVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRAMEYAMRPNILEEYK 1192 (1304)
Q Consensus 1113 ~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~rp~~~~~l~ 1192 (1304)
|+|++|++|++.+.+++++++|++|.+.|+++++|||++++++++++|++|+++|+++++||..|++|+..||.+++.|+
T Consensus 559 ~i~~~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~wl~~~~~~~~~~~~~~~~~~l~~~~~~i~~r~~e~~~rp~~~~~~~ 638 (675)
T 3d2f_A 559 YIYTLRGKLEEEYAPFASDAEKTKLQGMLNKAEEWLYDEGFDSIKAKYIAKYEELASLGNIIRGRYLAKEEEKKQAIRSK 638 (675)
T ss_dssp HHHHHHHHHTTTTGGGSCHHHHHHHHHHHHHHHHHTTTGGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHHhcCCchhhHHHHHHHHHHHHHHHHHHHHHHHHhhcChHHHHHHH
Confidence 99999999986688999999999999999999999998888899999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHh
Q psy7140 1193 HSVQSAKNIVDAAF 1206 (1304)
Q Consensus 1193 ~~l~~~~~~~~~~~ 1206 (1304)
+.|++++.+++.+.
T Consensus 639 ~~~~~~~~~~~~~~ 652 (675)
T 3d2f_A 639 QEASQMAAMAEKLA 652 (675)
T ss_dssp --------------
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999987775
No 2
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=3.3e-90 Score=860.67 Aligned_cols=589 Identities=26% Similarity=0.437 Sum_probs=543.9
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeC-CceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChh
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSD-KNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPF 638 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~ 638 (1304)
..+||||||||||+||++.+|.++++.|..|.|++||+|+|.+ +++++|..|..+...+|.++++++||+||+.++++.
T Consensus 2 ~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~ 81 (605)
T 4b9q_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSHH
T ss_pred CcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCHH
Confidence 4699999999999999999999999999999999999999974 589999999999999999999999999999999999
Q ss_pred HHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHH
Q psy7140 639 VQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTA 718 (1304)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~A 718 (1304)
++...+++||.++..++|.+.+.+. +..++|+++++++|++|++.|+.++|.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~~~~~----~~~~~p~ei~a~iL~~lk~~ae~~lg~~v~~~VITVPa~f~~~qr~a~~~A 157 (605)
T 4b9q_A 82 VQRDVSIMPFKIIAADNGDAWVEVK----GQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHTTCSSEEEECTTSBEEEEET----TEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCceEEEEC----CEEECHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 9999999999999988888877663 578999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEEC----CeEEEEEEecCCCCCcHH
Q psy7140 719 ASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVK----GKLKVLSNVCDSEIGGRN 794 (1304)
Q Consensus 719 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~----~~~~v~~~~~~~~lGG~~ 794 (1304)
+++|||+++++++||+|||++|++.+. ..+.++||||+||||||+|++++.+ +.++++++.++.++||++
T Consensus 158 a~~AGl~v~~li~EP~AAAlaygl~~~------~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d 231 (605)
T 4b9q_A 158 GRIAGLEVKRIINEPTAAALAYGLDKG------TGNRTIAVYDLGGGAFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (605)
T ss_dssp HHHTTCEEEEEEEHHHHHHHHHHTTSC------CSSEEEEEEEECSSCEEEEEEEEEESSSCEEEEEEEEEEETTCSHHH
T ss_pred HHHcCCceEEEeCcHHHHHHHhhhhcc------CCCCEEEEEECCCCeEEEEEEEEecCCCCceEEEEEecCCCCcChHH
Confidence 999999999999999999999987653 3468999999999999999999998 899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCC----cceEEEecHHHHHHHHH
Q psy7140 795 IDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDD----KDVHAELKRNDLETLCE 870 (1304)
Q Consensus 795 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~----~d~~~~itr~efe~l~~ 870 (1304)
||..|++|+..+|.++++.+...+++++.+|+.+||++|+.||.+.. ..+.++.+..+ .++.++|||++|+++|+
T Consensus 232 ~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~-~~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~ 310 (605)
T 4b9q_A 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ-TDVNLPYITADATGPKHMNIKVTRAKLESLVE 310 (605)
T ss_dssp HHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE-EEEEEEEEEECSSSEEEEEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC-eEEEEeeeccCCCCCeeEEEEEeHHHHHHHHH
Confidence 99999999999999999999999999999999999999999998653 57777776654 67899999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCcccce
Q psy7140 871 HIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAVKIRH 950 (1304)
Q Consensus 871 ~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~~~~~ 950 (1304)
++++++..+++++|+.++++..+|+.|+||||+||+|+|++.|+++||.++..+.||++|||+|||++|+.+++. +++
T Consensus 311 ~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~~~~~~~nPdeaVA~GAai~a~~l~~~--~~~ 388 (605)
T 4b9q_A 311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKD 388 (605)
T ss_dssp HHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTSCCCSSSCTTTHHHHHHHHHHHHHHTS--SCS
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhccCcCCCcChhHHHHHhHHHHHHHhcCC--CCc
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999987 578
Q ss_pred eEEEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCC
Q psy7140 951 FDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKP 1025 (1304)
Q Consensus 951 ~~~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~ 1025 (1304)
+.+.|++|++||+++.+ +...+||++|+++|++++.+|.+.. .+.|.+|+|+. ++.+|..||+|.|+|+||
T Consensus 389 ~~l~dv~p~slgie~~~----g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~ 464 (605)
T 4b9q_A 389 VLLLDVTPLSLGIETMG----GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINP 464 (605)
T ss_dssp EEEECBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCC
T ss_pred eEEEeeeeeEEEEEEcC----CEEEEEEeCCCcCCcceEEEeeeecccCceEEEEEEeccccccccCCEeeEEEEeCCCC
Confidence 99999999999999752 3455799999999999999996643 48899999987 778999999999999999
Q ss_pred CCCCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHH
Q psy7140 1026 GPKGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVD 1105 (1304)
Q Consensus 1026 ~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 1105 (1304)
.|.|.+ +|+|+|++|.||+|+|++.+. .+++..+++|... .+||++|+++|++++++|.++|++.+++.+
T Consensus 465 ~~~g~~-~i~v~f~id~~gil~v~a~~~-------~tg~~~~i~i~~~--~~ls~~ei~~~~~~~~~~~~~d~~~~~~~~ 534 (605)
T 4b9q_A 465 APRGMP-QIEVTFDIDADGILHVSAKDK-------NSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKCEELVQ 534 (605)
T ss_dssp CSTTCC-CEEEEEEECTTSCEEEEEEET-------TTCCEECCEEESC--CSCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcCCCc-eEEEEEEEcCCcEEEEEEEec-------CCCcEEEEEecCC--CCCCHHHHHHHHHHhhhhHhhHHHHHHHHH
Confidence 999987 599999999999999998632 3456667777664 589999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q psy7140 1106 AKNALEEYVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRAME 1180 (1304)
Q Consensus 1106 akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e 1180 (1304)
+||+||+|+|++|+.|+ ++.+++++++|+.|.+.++++++||+.+ ++++|++++++|++.++|+..++++
T Consensus 535 ~~n~~e~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 4b9q_A 535 TRNQGDHLLHSTRKQVE-EAGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHH-HHGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHH-hhhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999997 5788999999999999999999999864 4889999999999999999988764
No 3
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=4.4e-89 Score=850.53 Aligned_cols=589 Identities=26% Similarity=0.440 Sum_probs=539.2
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEe-CCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChh
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFS-DKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPF 638 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~-~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~ 638 (1304)
..+||||||||||+||++.+|.++++.|..|.+++||+|+|. +++++||..|..+...+|.++++++||+||+.++++.
T Consensus 2 ~~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~ 81 (605)
T 2kho_A 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (605)
T ss_dssp --CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTT
T ss_pred CCEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHH
Confidence 358999999999999999999999999999999999999995 4689999999999999999999999999999999999
Q ss_pred HHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHH
Q psy7140 639 VQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTA 718 (1304)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~A 718 (1304)
++...+.+||.++...+|.+.+.+ .+..++|+++++++|++|++.|+.+++.++.++|||||+||++.||+++++|
T Consensus 82 v~~~~~~~p~~~~~~~~g~~~i~~----~g~~~~~~ei~a~~L~~l~~~ae~~l~~~v~~~VitVPa~f~d~qr~a~~~A 157 (605)
T 2kho_A 82 VQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (605)
T ss_dssp HHHHHHHCSSCEEECTTSBEEEEE----TTEEECHHHHHHHHHHHHHHHHHHHHCSCCCEEEEEECTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEECCCCceEEEE----CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCcEEEEEECCCCCHHHHHHHHHH
Confidence 999999999999888888887776 2468999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEE----CCeEEEEEEecCCCCCcHH
Q psy7140 719 ASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV----KGKLKVLSNVCDSEIGGRN 794 (1304)
Q Consensus 719 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~----~~~~~v~~~~~~~~lGG~~ 794 (1304)
+++|||+++++++||+|||++|++.+. ..+.++||||+||||||+|++++. ++.++++++.++.++||++
T Consensus 158 ~~~AGl~v~~li~EP~AAAlay~l~~~------~~~~~vlV~DlGGGT~Dvsi~~~~~~~~~g~~~v~a~~gd~~lGG~d 231 (605)
T 2kho_A 158 GRIAGLEVKRIINEPTAAALAYGLDKG------TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (605)
T ss_dssp HHTTTCEEEEEEEHHHHHHHHTTTTSS------SSEEEEEEEEECSSCEEEEEEEEECTTTSCEEEEEEEEEESSCSGGG
T ss_pred HHHcCCceEEEecCHHHHHHHhhhccc------CCCCEEEEEECCCCeEEEEEEEEEecCCCCeEEEEEECCCCCccHHH
Confidence 999999999999999999999987542 246889999999999999999998 7899999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCC----cceEEEecHHHHHHHHH
Q psy7140 795 IDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDD----KDVHAELKRNDLETLCE 870 (1304)
Q Consensus 795 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~----~d~~~~itr~efe~l~~ 870 (1304)
||+.|++|+.++|+++++.++..+++++.+|+.+||++|+.||.+. ...+.++++.++ .++.++|||++|+++|+
T Consensus 232 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~-~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~ 310 (605)
T 2kho_A 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQ-QTDVNLPYITADATGPKHMNIKVTRAKLESLVE 310 (605)
T ss_dssp THHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSS-EEEEEEEEEEEETTEEEEEEEEEEHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCC-ceEEEecccccCCCCceEEEEEEeHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999865 367888877653 57788999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCcccce
Q psy7140 871 HIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAVKIRH 950 (1304)
Q Consensus 871 ~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~~~~~ 950 (1304)
++++++..+++++|+.+++...+|+.|+||||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. +++
T Consensus 311 ~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~~~~~npd~aVA~GAa~~a~~l~~~--~~~ 388 (605)
T 2kho_A 311 DLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLTGD--VKD 388 (605)
T ss_dssp STTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHHTTTTTS--CCC
T ss_pred HHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCcCcCCCcchHHHHHHHHHHHHhcCC--ccC
Confidence 999999999999999999999999999999999999999999999999999999999999999999999999886 678
Q ss_pred eEEEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCC
Q psy7140 951 FDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKP 1025 (1304)
Q Consensus 951 ~~~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~ 1025 (1304)
+.+.|++|+++|+++.+ +...++|++|+++|++++.+|.+.. .+.|.+|+++. ++.+|..||+|.|+++||
T Consensus 389 ~~l~dv~p~slgi~~~~----g~~~~li~r~t~iP~~~~~~f~t~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~ 464 (605)
T 2kho_A 389 VLLLDVTPLSLGIETMG----GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINP 464 (605)
T ss_dssp CCCSBCCCCCEEEEETT----TEEEEEECTTBCSSEEEEEEECCSSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCS
T ss_pred ceEEeeeeeeccccccC----CceEEEEecccccCccceEEEEecCCCceEEEEEEEeccCcccccCcEEeEEEecCCCC
Confidence 99999999999999752 3455799999999999999996532 48899999877 677899999999999999
Q ss_pred CCCCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHH
Q psy7140 1026 GPKGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVD 1105 (1304)
Q Consensus 1026 ~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ 1105 (1304)
.|+|.+ +|+|+|++|.||+|+|++.+. .+++..+++|... .+||++++++|++++++|..+|++.+++.+
T Consensus 465 ~~~g~~-~i~v~f~id~~gil~v~a~~~-------~tg~~~~i~i~~~--~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~ 534 (605)
T 2kho_A 465 APRGMP-QIEVTFDIDADGILHVSAKDK-------NSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFDELVQ 534 (605)
T ss_dssp CCTTCS-CEEEEEEECTTSCEEEEEEET-------TTCCEEEEEECTT--SSCCHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred CCCCCc-EEEEEEEEcCCCceeEEEEEc-------CCCceeecccccc--cCCCHHHHHHHHHHHHHHHHhHHHHHHHHH
Confidence 999987 599999999999999998532 2455666777665 689999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q psy7140 1106 AKNALEEYVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRAME 1180 (1304)
Q Consensus 1106 akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e 1180 (1304)
+||+||+|+|++|++|++ +.+++++++|++|.+.++++++||+++ ++++|++++++|++.++||..|+++
T Consensus 535 ~~n~~e~~~~~~~~~l~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~----~~~~~~~~~~~l~~~~~~~~~~~~~ 604 (605)
T 2kho_A 535 TRNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 604 (605)
T ss_dssp HHHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHTTCHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999999999999999975 888999999999999999999999843 7899999999999999999998764
No 4
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=1.3e-83 Score=794.13 Aligned_cols=545 Identities=30% Similarity=0.520 Sum_probs=502.7
Q ss_pred cccceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCC
Q psy7140 557 QIIMSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDD 636 (1304)
Q Consensus 557 ~~~~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~ 636 (1304)
|+|+.+||||||||||+||++.+|.++++.|+.|+|++||+|+|.+++++||..|..+...+|.++++++||+||+.+++
T Consensus 1 M~m~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d 80 (554)
T 1yuw_A 1 MSKGPAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDD 80 (554)
T ss_dssp CCSCCCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSC
T ss_pred CCCCCEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCc
Confidence 56778999999999999999999999999999999999999999998999999999999999999999999999999999
Q ss_pred hhHHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHH
Q psy7140 637 PFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALL 716 (1304)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~ 716 (1304)
+.++...+.+||.++. .+|...+.+.+.++...++|+++++++|++|++.|+.++|.++.++|||||++|++.||++++
T Consensus 81 ~~v~~~~~~~p~~v~~-~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~~lg~~v~~~VitVPa~f~~~qr~a~~ 159 (554)
T 1yuw_A 81 AVVQSDMKHWPFMVVN-DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEAYLGKTVTNAVVTVPAYFNDSQRQATK 159 (554)
T ss_dssp SHHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHH
T ss_pred HHHHHHhhcCCeEEEe-cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHH
Confidence 9999999999999884 478888888888878899999999999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHH
Q psy7140 717 TAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNID 796 (1304)
Q Consensus 717 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D 796 (1304)
+|++.||++++++++||+|||++|++.+.. ..+..+||||+||||||+|++++.++.++++++.++.++||++||
T Consensus 160 ~A~~~AGl~~~~li~EP~AAAlay~~~~~~-----~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d 234 (554)
T 1yuw_A 160 DAGTIAGLNVLRIINEPTAAAIAYGLDKKV-----GAERNVLIFDLGGGTFDVSILTIAAGIFEVKSTAGDTHLGGEDFD 234 (554)
T ss_dssp HHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-----SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHH
T ss_pred HHHHHcCCCeEEEeCcHHHHHHHHHhhccC-----CCCcEEEEEEcCCCeEEEEEEEEcCCcEEEEEEeCCCCCCHHHHH
Confidence 999999999999999999999999875431 246889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHH
Q psy7140 797 KILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRI 876 (1304)
Q Consensus 797 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i 876 (1304)
+.|++|+.++|.++++.++..+++++.+|+.+||++|+.||.+. ...+.+++++++.++...|+|++|+++++++++++
T Consensus 235 ~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~-~~~i~i~~~~~g~~~~~~ltr~~~e~l~~~~~~~i 313 (554)
T 1yuw_A 235 NRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSST-QASIEIDSLYEGIDFYTSITRARFEELNADLFRGT 313 (554)
T ss_dssp HHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSS-EEEEEETTCSSSCCEEEEEEHHHHHHHTHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCc-eEEEEEeeccCCceEEEEEEHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999865 46788888889999999999999999999999999
Q ss_pred HHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcC-CCCCCCCCchhHHHhHHHHHhhHhcC--CcccceeEE
Q psy7140 877 EICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFH-KPPSTTLNQDEAVSRGCALQCAILSP--AVKIRHFDV 953 (1304)
Q Consensus 877 ~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg-~~~~~~~n~~eava~Gaa~~aa~ls~--~~~~~~~~~ 953 (1304)
..+++++|+.++++..+|+.|+||||+||+|+|++.|++.|+ .++..+.||++|||+|||++|+.+++ .++++++.+
T Consensus 314 ~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~aVA~Gaa~~a~~l~~~~~~~~~~~~~ 393 (554)
T 1yuw_A 314 LDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILSGDKSENVQDLLL 393 (554)
T ss_dssp THHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHTTSCCCCCTTSSCC
T ss_pred HHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchhHHHHHHHHHHHHhcCCccccccceEE
Confidence 999999999999999999999999999999999999999995 78889999999999999999999988 467889999
Q ss_pred EeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEec----ceeEEEEEEecC-CCCCCccceeEEeecCCCCCC
Q psy7140 954 TDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRA----NVFDVQAYYDCP-VPYPTQFVGQFIIKDIKPGPK 1028 (1304)
Q Consensus 954 ~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~----~~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~~ 1028 (1304)
.|++|++||+++.+ +...++|++|+++|.+++.+|.+. ..+.|.+|+++. ...+|..||+|.|+|+|+.|.
T Consensus 394 ~dv~p~slgi~~~~----g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v~i~v~~ge~~~~~~n~~lg~~~l~~i~~~~~ 469 (554)
T 1yuw_A 394 LDVTPLSLGIETAG----GVMTVLIKRNTTIPTKQTQTFTTYSDNQPGVLIQVYEGERAMTKDNNLLGKFELTGIPPAPR 469 (554)
T ss_dssp CCBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEEEESSTTCSEEEEEEEESSSSBGGGSEEEEEEEEECCCCCST
T ss_pred EEeeeeEEEEEecC----ceEEEEEECCCccCceeEEEeeeccCCCceEEEEEEecCccccccCcEEEEEEEeCCCCCcc
Confidence 99999999999752 345589999999999999999763 348899999877 667899999999999999999
Q ss_pred CCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHHH
Q psy7140 1029 GKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAKN 1108 (1304)
Q Consensus 1029 ~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN 1108 (1304)
|.+ +|+|+|++|.||+|+|++.+. .+++..+++|... ..+||+++++++++++++|..+|++.+++.++||
T Consensus 470 g~~-~i~v~f~id~~gil~v~a~~~-------~tg~~~~~~i~~~-~~~ls~~~i~~~~~~~~~~~~~d~~~~~~~~~~n 540 (554)
T 1yuw_A 470 GVP-QIEVTFDIDANGILNVSAVDK-------STGKENKITITND-KGRLSKEDIERMVQEAEKYKAEDEKQRDKVSSKN 540 (554)
T ss_dssp TCC-CEEEEEEECTTCCEEEEEEET-------TTCCEEEEEECCC-SSCSCHHHHHHHHHHHHHTTTHHHHHTTSSCSCE
T ss_pred ccc-EEEEEEEEccCceEEEEEEec-------cCCCceeEEEecC-CCCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHH
Confidence 988 599999999999999998632 2455666777654 3579999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHh
Q psy7140 1109 ALEEYVYELRDGL 1121 (1304)
Q Consensus 1109 ~LEs~iy~~r~~L 1121 (1304)
+||+|+|++|++|
T Consensus 541 ~~e~~~~~~~~~l 553 (554)
T 1yuw_A 541 SLESYAFNMKATV 553 (554)
T ss_dssp ECSSCCSCSCCCC
T ss_pred HHHHHHHHHHHhh
Confidence 9999999999876
No 5
>3d2f_A Heat shock protein homolog SSE1; nucleotide exchange factor, protein folding, ATP-binding, Ca binding, chaperone, nucleotide-binding, phosphoprotein; HET: ATP; 2.30A {Saccharomyces cerevisiae} PDB: 3d2e_A* 3c7n_A* 2qxl_A*
Probab=100.00 E-value=1.9e-75 Score=731.47 Aligned_cols=470 Identities=38% Similarity=0.668 Sum_probs=423.1
Q ss_pred CcEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhH
Q psy7140 1 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 80 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~ 80 (1304)
|++||||||||||+||++.+|++++++|..|+|.+||+|+|.+++++||..|+.+...||.++++++||+||+.++++.+
T Consensus 2 m~~iGIDlGTtns~va~~~~g~~~ii~n~~g~r~tPS~Vaf~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v 81 (675)
T 3d2f_A 2 STPFGLDLGNNNSVLAVARNRGIDIVVNEVSNRSTPSVVGFGPKNRYLGETGKNKQTSNIKNTVANLKRIIGLDYHHPDF 81 (675)
T ss_dssp CCCEEEECCSSEEEEEEEETTEEEEECCTTSCSSEECCEEECSSSEEETHHHHHHHTTCGGGEECCHHHHTTCBTTCTTH
T ss_pred CcEEEEEcCCCcEEEEEEECCeeEEEECCCCCcccceEEEECCCcEEecHHHHHhhhhChHhHHHHHHHHhCCCCCcHHH
Confidence 77999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHH
Q psy7140 81 QEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISE 160 (1304)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~ 160 (1304)
+.+.+++||.++.. .+|.+.+.+.+.++.+.++|+++++++|++|++.|+
T Consensus 82 ~~~~~~~p~~v~~~------------------------------~~g~~~~~~~~~g~~~~~speei~a~~L~~lk~~ae 131 (675)
T 3d2f_A 82 EQESKHFTSKLVEL------------------------------DDKKTGAEVRFAGEKHVFSATQLAAMFIDKVKDTVK 131 (675)
T ss_dssp HHHHTTCCSEEEEC------------------------------TTSBEEEEEEETTEEEEEEHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCeeEEEc------------------------------CCCceEEEEEeCCCCceEcHHHHHHHHHHHHHHHHH
Confidence 99999999876532 356777888777777889999999999999999999
Q ss_pred hhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEE
Q psy7140 161 NEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQV 240 (1304)
Q Consensus 161 ~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dv 240 (1304)
.++|.++.++|||||+||++.||+++++|++.||++++++++||+|||++|++.+..++.....+.++||||+||||||+
T Consensus 132 ~~lg~~v~~~VITVPa~f~~~qR~a~~~Aa~~AGl~~~~li~EP~AAAlaygl~~~~~~~~~~~~~~vlV~DlGGGT~Dv 211 (675)
T 3d2f_A 132 QDTKANITDVCIAVPPWYTEEQRYNIADAARIAGLNPVRIVNDVTAAGVSYGIFKTDLPEGEEKPRIVAFVDIGHSSYTC 211 (675)
T ss_dssp HHHCSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHHHCSCCCCSSSCCEEEEEEEECSSCEEE
T ss_pred HHhCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEEcchHHHHHHHhhhccccccccCCCcEEEEEEcCCCcEEE
Confidence 99999999999999999999999999999999999999999999999999998764332212356789999999999999
Q ss_pred EEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeEEEee
Q psy7140 241 CIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIEC 320 (1304)
Q Consensus 241 sv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~ 320 (1304)
|++++.++.++|+++.|+.++||++||+.|++|+.++|.++++++...+++++.+|+.+||++|+.||.+. ...+.+++
T Consensus 212 sv~~~~~g~~~V~a~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~a~~rL~~~aE~aK~~Ls~~~-~~~i~i~~ 290 (675)
T 3d2f_A 212 SIMAFKKGQLKVLGTACDKHFGGRDFDLAITEHFADEFKTKYKIDIRENPKAYNRILTAAEKLKKVLSANT-NAPFSVES 290 (675)
T ss_dssp EEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCGGGCHHHHHHHHHHHHHHHHHHHHCS-EEEEEETT
T ss_pred EEEEecCCeEEEEEEcCCCCccHHHHHHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHhcCcCC-ceEEEEee
Confidence 99999999999999999999999999999999999999999999998999999999999999999999875 46788888
Q ss_pred ecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchh
Q psy7140 321 FMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDE 400 (1304)
Q Consensus 321 ~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~e 400 (1304)
+++|.++.++|||++|+++|+++++++..+++++|+++++++.+|+.|+||||+||+|+|++.|+++||.++..+.||++
T Consensus 291 ~~~g~~~~~~itr~~fe~l~~~l~~~i~~~i~~~L~~a~l~~~~I~~VvLvGGssriP~v~~~l~~~fg~~~~~~~nPde 370 (675)
T 3d2f_A 291 VMNDVDVSSQLSREELEELVKPLLERVTEPVTKALAQAKLSAEEVDFVEIIGGTTRIPTLKQSISEAFGKPLSTTLNQDE 370 (675)
T ss_dssp SSSSCCEEEEEEHHHHHHHTHHHHTTTTHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHHTSCEECCSCTTT
T ss_pred eccCceEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhCcEEEEECCCccChHHHHHHHHhcCCCccccCCcch
Confidence 88889999999999999999999999999999999999999999999999999999999999999999998889999999
Q ss_pred HHHHHHHHHhhHhcCCceeeeeEeeeeeccceEEEEEecCCc--cceecccCCCCccceeEEEEEEeccceeeeeeeecC
Q psy7140 401 AVSRGCALQCAILSPAVKIRHFDVTDVQNYPIKVAWNPVGGE--DGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCP 478 (1304)
Q Consensus 401 aVa~Gaa~~aa~ls~~~~~~~~~~~dv~~~~~~i~~~~~~~~--~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~ 478 (1304)
|||+|||++|+.+++.++++++.++|++||++++.+. +|. .....++++++|+|.++..+|++..++.+...
T Consensus 371 aVA~GAa~~a~~ls~~~~v~~~~l~Dv~p~slgi~~~--~~~~~~~~~~li~rnt~iP~~k~~~f~~~~~~~~~~~---- 444 (675)
T 3d2f_A 371 AIAKGAAFICAIHSPTLRVRPFKFEDIHPYSVSYSWD--KQVEDEDHMEVFPAGSSFPSTKLITLNRTGDFSMAAS---- 444 (675)
T ss_dssp HHHHHHHHHHHHTCSSCCCCCCEEEEEECSCEEEEEC--CTTCSCSEEEEECTTEEESEEEEEEEEESSCEEEEEE----
T ss_pred HHHHHHHHHHHHhCCCCcccceEEEeeeecceEeeec--CCCCCcceEEEEcCCCCCCcccceeeeecCCceEEEE----
Confidence 9999999999999999888999999999998888763 432 12334557777888888888888654433221
Q ss_pred CCCCCcccccccCCCCC-CCCceeEEEEcCCCCCCCcc
Q psy7140 479 VPYPTQFVAYYDCPVPY-PTQFVGQFIIKDIKPRTSRQ 515 (1304)
Q Consensus 479 ~~~~~~~~~~~e~~~~~-~n~~lg~~~i~~i~~~~~g~ 515 (1304)
+++|+.++. +|..||+|.|+||||.|.|.
T Consensus 445 --------~~ge~~~~~~~n~~lg~f~l~gi~~~~~g~ 474 (675)
T 3d2f_A 445 --------YTDITQLPPNTPEQIANWEITGVQLPEGQD 474 (675)
T ss_dssp --------ESCGGGSCTTCCSEEEEEEEECCCCCSSCS
T ss_pred --------EcCCcccccccCceeeEEEecCcCCCCCCC
Confidence 235667777 89999999999999988763
No 6
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=1e-73 Score=701.06 Aligned_cols=499 Identities=27% Similarity=0.471 Sum_probs=448.3
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChhH
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 639 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~~ 639 (1304)
+.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.+++++||..|..+...+| ++++++||+||+++.
T Consensus 2 ~~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~---- 76 (509)
T 2v7y_A 2 SKIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK---- 76 (509)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC----
T ss_pred CCEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE----
Confidence 368999999999999999999999999999999999999998788999999999999999 999999999998432
Q ss_pred HHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHHH
Q psy7140 640 QEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTAA 719 (1304)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~Aa 719 (1304)
+ .+ .+..++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 77 ----------~----------~~----~g~~~~~~ei~a~~L~~l~~~ae~~l~~~~~~~VitvPa~~~~~qr~a~~~a~ 132 (509)
T 2v7y_A 77 ----------V----------EI----EGKQYTPQEISAIILQYLKSYAEDYLGEPVTRAVITVPAYFNDAQRQATKDAG 132 (509)
T ss_dssp ----------E----------EE----TTEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred ----------E----------EE----CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHH
Confidence 1 11 12468999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHH
Q psy7140 720 SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKIL 799 (1304)
Q Consensus 720 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l 799 (1304)
+.||++++++++||+|||++|++.+ ..+.++||||+||||||+|++++.++.++++++.++.++||++||+.|
T Consensus 133 ~~AGl~~~~li~Ep~AAAlay~~~~-------~~~~~vlV~D~GgGT~Dvsv~~~~~g~~~v~a~~g~~~lGG~d~d~~l 205 (509)
T 2v7y_A 133 RIAGLEVERIINEPTAAALAYGLDK-------EEDQTILVYDLGGGTFDVSILELGDGVFEVKATAGDNHLGGDDFDQVI 205 (509)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTGGG-------SCSEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCCeEEEecCHHHHHHHHhhcc-------CCCCEEEEEECCCCeEEEEEEEEcCCeEEEEEecCCCCcCHHHHHHHH
Confidence 9999999999999999999999754 246899999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCC----cceEEEecHHHHHHHHHHHHHH
Q psy7140 800 AEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDD----KDVHAELKRNDLETLCEHIFGR 875 (1304)
Q Consensus 800 ~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~----~d~~~~itr~efe~l~~~~~~~ 875 (1304)
++|+.++|.++++.++..+++++.+|+.+||++|+.||.+. ...+.++.+.++ .++.++|||++|+++++|++++
T Consensus 206 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~-~~~i~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~ 284 (509)
T 2v7y_A 206 IDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVT-QTQISLPFISANENGPLHLEMTLTRAKFEELSAHLVER 284 (509)
T ss_dssp HHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCS-EEEEEEEEEEEETTEEEEEEEEEEHHHHHHHTHHHHHT
T ss_pred HHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCC-cEEEEEeccccCCCCCeeEEEEEEHHHHHHHHHHHHHH
Confidence 99999999999999998899999999999999999999865 357777776642 4678899999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCcccceeEEEe
Q psy7140 876 IEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAVKIRHFDVTD 955 (1304)
Q Consensus 876 i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~~~~~~~~~d 955 (1304)
+..+++++|+.+++...+|+.|+|+||+||+|+|++.|++.||.++..+.||++|||+|||++|+.+++. ++++.+.|
T Consensus 285 i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~p~~aVa~Gaa~~a~~l~~~--~~~~~~~d 362 (509)
T 2v7y_A 285 TMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVNPDEVVAIGAAIQGGVIAGE--VKDVVLLD 362 (509)
T ss_dssp THHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSCTTTHHHHHHHHHHHHHHTC--CCCCCCCC
T ss_pred HHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCCchhhhHhhHHHHHHHhcCC--ccCceEEE
Confidence 9999999999999998999999999999999999999999999989999999999999999999999876 57889999
Q ss_pred eecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEec--c--eeEEEEEEecC-CCCCCccceeEEeecCCCCCCCC
Q psy7140 956 VQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRA--N--VFDVQAYYDCP-VPYPTQFVGQFIIKDIKPGPKGK 1030 (1304)
Q Consensus 956 ~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~--~--~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~~~~ 1030 (1304)
++|++||+++.+ +...++|++|+++|.+++.+|.+. + .+.|.+|+++. ...+|..||+|.|+++||.++|.
T Consensus 363 v~p~slgi~~~~----~~~~~li~~~~~iP~~~~~~f~~~~d~q~~~~i~v~~ge~~~~~~~~~lg~~~l~~i~~~~~g~ 438 (509)
T 2v7y_A 363 VTPLSLGIETMG----GVFTKLIERNTTIPTSKSQVFTTAADNQTTVDIHVLQGERPMAADNKSLGRFQLTGIPPAPRGV 438 (509)
T ss_dssp BCSSEEEEEETT----TEEEEEECTTCBSSEEEEEEECCSSTTCCEEEEEEEEESSSBGGGSEEEEEEEEECCCCCCTTC
T ss_pred eeccccceeecC----CceEEEEeCCCcCCcceEEEEEeeccCcEEEEEEEEecCccccccCcEEEEEEEeCCCCCCCcc
Confidence 999999999752 345579999999999999999653 2 48899999987 66789999999999999999998
Q ss_pred CceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHHHHH
Q psy7140 1031 PQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAKNAL 1110 (1304)
Q Consensus 1031 ~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN~L 1110 (1304)
+ +|+|+|++|.||+|+|++.+. .+++..+++|... .+||+++++++++++++|..+|++.+++.++||+|
T Consensus 439 ~-~i~v~f~id~~gil~v~a~~~-------~~g~~~~~~i~~~--~~l~~~~i~~~~~~~~~~~~~d~~~~~~~~~~~~~ 508 (509)
T 2v7y_A 439 P-QIEVTFDIDANGIVHVRAKDL-------GTNKEQSITIKSS--SGLSEEEIQRMIKEAEENAEADRKRKEAAELRNEA 508 (509)
T ss_dssp S-CEEEEEEECTTSCEEEEEEET-------TTCCEEEEEECSS--CSCCSHHHHHHHHHHHHSCGGGGGGGGCCCC----
T ss_pred c-EEEEEEEEcCCceEEEEEEEc-------CCCcEEEEEEEec--CCCCHHHHHHHHHHHHHhhhccHHHHHHHHHHhhc
Confidence 7 599999999999999998532 2455666777665 68999999999999999999999999999999999
Q ss_pred H
Q psy7140 1111 E 1111 (1304)
Q Consensus 1111 E 1111 (1304)
|
T Consensus 509 e 509 (509)
T 2v7y_A 509 D 509 (509)
T ss_dssp -
T ss_pred C
Confidence 7
No 7
>4b9q_A Chaperone protein DNAK; HET: ATP; 2.40A {Escherichia coli} PDB: 2kho_A 1dkg_D
Probab=100.00 E-value=1e-73 Score=712.24 Aligned_cols=459 Identities=31% Similarity=0.494 Sum_probs=409.1
Q ss_pred Cc-EEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcC-CceEEcHhHHHhhhhCCCcccccchhhcCCCCCCh
Q psy7140 1 MS-VIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSD-KNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDP 78 (1304)
Q Consensus 1 m~-viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~-~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~ 78 (1304)
|+ |||||||||||+||++.+|.++++.|..|++.+||+|+|.+ +++++|..|+.+...+|.++++++||+||+.++++
T Consensus 1 M~~viGIDlGTT~S~Va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~ 80 (605)
T 4b9q_A 1 MGKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGCTLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDE 80 (605)
T ss_dssp -CCEEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECCEEECTTSCEEESHHHHHTTTTCGGGEECCGGGTTTCBTTSH
T ss_pred CCcEEEEEcCCCcEEEEEEECCEEEEEECCCCCcccceEEEEeCCCcEEecHHHHHHHHhCCCcEehhhHHhhCCCCCCH
Confidence 54 99999999999999999999999999999999999999974 57999999999999999999999999999999999
Q ss_pred hHHHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHH
Q psy7140 79 FVQEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDI 158 (1304)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~ 158 (1304)
.++...+.+||.++... +|.+.+.+ .++.++|+++++++|++|++.
T Consensus 81 ~v~~~~~~~p~~~~~~~------------------------------~g~~~~~~----~~~~~~p~ei~a~iL~~lk~~ 126 (605)
T 4b9q_A 81 EVQRDVSIMPFKIIAAD------------------------------NGDAWVEV----KGQKMAPPQISAEVLKKMKKT 126 (605)
T ss_dssp HHHHHHTTCSSEEEECT------------------------------TSBEEEEE----TTEEECHHHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCeEEEEcC------------------------------CCceEEEE----CCEEECHHHHHHHHHHHHHHH
Confidence 99999999999876543 44455544 357899999999999999999
Q ss_pred HHhhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeE
Q psy7140 159 SENEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSAL 238 (1304)
Q Consensus 159 a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~ 238 (1304)
|+.++|.++.++|||||+||++.||+++++|++.|||+++++++||+|||++|++.... .+.++||||+|||||
T Consensus 127 ae~~lg~~v~~~VITVPa~f~~~qr~a~~~Aa~~AGl~v~~li~EP~AAAlaygl~~~~------~~~~vlV~DlGGGT~ 200 (605)
T 4b9q_A 127 AEDYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKGT------GNRTIAVYDLGGGAF 200 (605)
T ss_dssp HHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHHHTTSCC------SSEEEEEEEECSSCE
T ss_pred HHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeCcHHHHHHHhhhhccC------CCCEEEEEECCCCeE
Confidence 99999999999999999999999999999999999999999999999999999876532 457899999999999
Q ss_pred EEEEEEEEC----CeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCcee
Q psy7140 239 QVCIAAFVK----GKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKL 314 (1304)
Q Consensus 239 dvsv~~~~~----~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~ 314 (1304)
|+|++++.+ +.++++++.|+.++||++||..|++|+.++|.++++.+...+++++.+|+.+||++|+.||.... .
T Consensus 201 Dvsi~~~~~~~~~~~~evla~~gd~~lGG~d~D~~l~~~l~~~f~~~~~~~~~~~~~~~~~L~~~aE~~K~~Ls~~~~-~ 279 (605)
T 4b9q_A 201 DISIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ-T 279 (605)
T ss_dssp EEEEEEEEESSSCEEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTCCCGGGCHHHHHHHHHHHHHHHHHTTTCSE-E
T ss_pred EEEEEEEecCCCCceEEEEEecCCCCcChHHHHHHHHHHHHHHHhhhcCCCcccCHHHHHHHHHHHHHHHHhcCcCCC-e
Confidence 999999998 89999999999999999999999999999999999999999999999999999999999998754 5
Q ss_pred eEEEeeecCC----cceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCC
Q psy7140 315 PLNIECFMDD----KDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHK 390 (1304)
Q Consensus 315 ~~~i~~~~~~----~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~ 390 (1304)
.+.++.+..+ .++.++|||++|+++++|+++++..+++++|+++++...+|+.|+||||+||+|+|++.|+++||.
T Consensus 280 ~i~~~~~~~~~~g~~~~~~~itr~~~e~l~~~~~~~i~~~v~~~L~~a~~~~~~i~~VvLvGG~sriP~v~~~l~~~fg~ 359 (605)
T 4b9q_A 280 DVNLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGK 359 (605)
T ss_dssp EEEEEEEEECSSSEEEEEEEEEHHHHHHHHHHHHHHTTHHHHHHHHHTTCCGGGCSEEEEESGGGGSHHHHHHHHHHHTS
T ss_pred EEEEeeeccCCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCcEEEEeCCccCchHHHHHHHHHhcc
Confidence 6777765543 678899999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCchhHHHHHHHHHhhHhcCCceeeeeEeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEecccee
Q psy7140 391 PPSTTLNQDEAVSRGCALQCAILSPAVKIRHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFD 470 (1304)
Q Consensus 391 ~~~~~~np~eaVa~Gaa~~aa~ls~~~~~~~~~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~ 470 (1304)
++..+.||++|||+|||++|+.+++. ++++.++|++|+++++ +..+|.+.++|++++.+|+..++.|+++.++|..
T Consensus 360 ~~~~~~nPdeaVA~GAai~a~~l~~~--~~~~~l~dv~p~slgi--e~~~g~~~~ii~rnt~iP~~~~~~f~t~~d~q~~ 435 (605)
T 4b9q_A 360 EPRKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDVTPLSLGI--ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSA 435 (605)
T ss_dssp CCCSSSCTTTHHHHHHHHHHHHHHTS--SCSEEEECBCSSCEEE--EETTTEEEEEECTTCBSSEEEEEEECCSSTTCCE
T ss_pred CcCCCcChhHHHHHhHHHHHHHhcCC--CCceEEEeeeeeEEEE--EEcCCEEEEEEeCCCcCCcceEEEeeeecccCce
Confidence 99999999999999999999999986 3567889998776665 5678888887776666666556656556666544
Q ss_pred eeeeeecCCCCCCcccccccCCCCCCCCceeEEEEcCCCCCCCcc
Q psy7140 471 VQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQFIIKDIKPRTSRQ 515 (1304)
Q Consensus 471 ~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~~i~~i~~~~~g~ 515 (1304)
+ .+.+ ++||+.++.+|..||+|.|+||||.|.|.
T Consensus 436 v----~i~v-------~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 4b9q_A 436 V----TIHV-------LQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp E----EEEE-------EESSCSBGGGSEEEEEEEEECCCCCSTTC
T ss_pred E----EEEE-------EeccccccccCCEeeEEEEeCCCCCcCCC
Confidence 4 4443 45677888999999999999999998663
No 8
>1yuw_A Heat shock cognate 71 kDa protein; chaperone; 2.60A {Bos taurus} SCOP: b.130.1.1 c.55.1.1 c.55.1.1 PDB: 3c7n_B* 2v7z_A*
Probab=100.00 E-value=6.8e-73 Score=698.56 Aligned_cols=467 Identities=33% Similarity=0.531 Sum_probs=416.9
Q ss_pred cEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhHH
Q psy7140 2 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFVQ 81 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~~ 81 (1304)
.+||||||||||+||++.+|.+++++|..|++.+||+|+|.++++++|..|+.+...+|.++++++||+||+.++++.++
T Consensus 5 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p~~ti~~~KrllG~~~~d~~v~ 84 (554)
T 1yuw_A 5 PAVGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTVFDAKRLIGRRFDDAVVQ 84 (554)
T ss_dssp CCEEEEECSSEEEEEEECSSSEEECCCTTSCSEEECCEEECSSCEEETHHHHTTTTTCGGGEECCGGGTTTCCSSCSHHH
T ss_pred CEEEEEeCcccEEEEEEECCEEEEEECCCCCeecceEEEEcCCcEEEcHHHHHhhhhChhhehHhhHHhcCCCCCcHHHH
Confidence 48999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHHh
Q psy7140 82 EELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISEN 161 (1304)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~~ 161 (1304)
..++.+||.++. .+|.+.+.+.+.++.+.++|+++++++|++|++.|+.
T Consensus 85 ~~~~~~p~~v~~-------------------------------~~g~~~~~v~~~~~~~~~sp~ei~a~~L~~lk~~ae~ 133 (554)
T 1yuw_A 85 SDMKHWPFMVVN-------------------------------DAGRPKVQVEYKGETKSFYPEEVSSMVLTKMKEIAEA 133 (554)
T ss_dssp HHHTTCSSEEEE-------------------------------ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEe-------------------------------cCCceEEEEEECCCceEEcHHHHHHHHHHHHHHHHHH
Confidence 999999987653 2466777888887778999999999999999999999
Q ss_pred hhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEE
Q psy7140 162 EIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVC 241 (1304)
Q Consensus 162 ~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 241 (1304)
++|.++.++|||||++|++.||+++++|++.||++++++++||+|||++|++.... ..+..+||||+||||||+|
T Consensus 134 ~lg~~v~~~VitVPa~f~~~qr~a~~~A~~~AGl~~~~li~EP~AAAlay~~~~~~-----~~~~~vlV~D~GgGT~Dvs 208 (554)
T 1yuw_A 134 YLGKTVTNAVVTVPAYFNDSQRQATKDAGTIAGLNVLRIINEPTAAAIAYGLDKKV-----GAERNVLIFDLGGGTFDVS 208 (554)
T ss_dssp HHSSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTCSTTC-----SSCEEEEEEEECSSCEEEE
T ss_pred HhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeCcHHHHHHHHHhhccC-----CCCcEEEEEEcCCCeEEEE
Confidence 99999999999999999999999999999999999999999999999999875432 2457899999999999999
Q ss_pred EEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeEEEeee
Q psy7140 242 IAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECF 321 (1304)
Q Consensus 242 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~~ 321 (1304)
++++.++.++++++.|+.++||++||+.|++++.++|.++++.+...+++++.+|+.+||++|+.||.... ..+.++++
T Consensus 209 v~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~-~~i~i~~~ 287 (554)
T 1yuw_A 209 ILTIAAGIFEVKSTAGDTHLGGEDFDNRMVNHFIAEFKRKHKKDISENKRAVRRLRTACERAKRTLSSSTQ-ASIEIDSL 287 (554)
T ss_dssp EEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHTSCCTTSCHHHHHHHHHHHHHHHHHHTTSSE-EEEEETTC
T ss_pred EEEEcCCcEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHhhhcccCce-EEEEEeec
Confidence 99999999999999999999999999999999999999999999888999999999999999999998754 57788888
Q ss_pred cCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcC-CCCCCCCCchh
Q psy7140 322 MDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFH-KPPSTTLNQDE 400 (1304)
Q Consensus 322 ~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~-~~~~~~~np~e 400 (1304)
.+|.++...|||++|+++++++++++..+++++|+++++.+.+|+.|+||||+|++|+|++.|++.|+ .++..+.||++
T Consensus 288 ~~g~~~~~~ltr~~~e~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~f~~~~v~~~~np~~ 367 (554)
T 1yuw_A 288 YEGIDFYTSITRARFEELNADLFRGTLDPVEKALRDAKLDKSQIHDIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDE 367 (554)
T ss_dssp SSSCCEEEEEEHHHHHHHTHHHHHHTTHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCCSCTTT
T ss_pred cCCceEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCcEEEEECCcccChHHHHHHHHHcCCCccccCCCchh
Confidence 88899999999999999999999999999999999999999999999999999999999999999996 78889999999
Q ss_pred HHHHHHHHHhhHhcCC--ceeeeeEeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecC
Q psy7140 401 AVSRGCALQCAILSPA--VKIRHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCP 478 (1304)
Q Consensus 401 aVa~Gaa~~aa~ls~~--~~~~~~~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~ 478 (1304)
|||+|||++|+.+++. ++++++.+.|++||++++ +..+|.+.+++++++.+|...++.|+++.++|..+ .+.
T Consensus 368 aVA~Gaa~~a~~l~~~~~~~~~~~~~~dv~p~slgi--~~~~g~~~~li~r~t~iP~~~~~~f~~~~d~q~~v----~i~ 441 (554)
T 1yuw_A 368 AVAYGAAVQAAILSGDKSENVQDLLLLDVTPLSLGI--ETAGGVMTVLIKRNTTIPTKQTQTFTTYSDNQPGV----LIQ 441 (554)
T ss_dssp HHHHHHHHHHHHTTSCCCCCTTSSCCCCBCSSCEEE--EETTTEEEEEECTTCBSSEEEEEEEEESSTTCSEE----EEE
T ss_pred HHHHHHHHHHHHhcCCccccccceEEEEeeeeEEEE--EecCceEEEEEECCCccCceeEEEeeeccCCCceE----EEE
Confidence 9999999999999984 456778899999777665 45688887777666655555555555555665433 444
Q ss_pred CCCCCcccccccCCCCCCCCceeEEEEcCCCCCCCcceEE
Q psy7140 479 VPYPTQFVAYYDCPVPYPTQFVGQFIIKDIKPRTSRQVRY 518 (1304)
Q Consensus 479 ~~~~~~~~~~~e~~~~~~n~~lg~~~i~~i~~~~~g~~~~ 518 (1304)
+ +++|+.++.+|..||+|.|+||||.|.|..+|
T Consensus 442 v-------~~ge~~~~~~n~~lg~~~l~~i~~~~~g~~~i 474 (554)
T 1yuw_A 442 V-------YEGERAMTKDNNLLGKFELTGIPPAPRGVPQI 474 (554)
T ss_dssp E-------EESSSSBGGGSEEEEEEEEECCCCCSTTCCCE
T ss_pred E-------EecCccccccCcEEEEEEEeCCCCCcccccEE
Confidence 3 34667778889999999999999988764333
No 9
>2kho_A Heat shock protein 70; molecular chaperone, HSP70, peptide binding, protein folding, acetylation, ATP-binding, cell inner membrane; NMR {Escherichia coli}
Probab=100.00 E-value=6.1e-72 Score=696.34 Aligned_cols=458 Identities=30% Similarity=0.492 Sum_probs=403.2
Q ss_pred cEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEc-CCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhH
Q psy7140 2 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFS-DKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 80 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~-~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~ 80 (1304)
.+||||||||||+||++.+|.+++++|..|++.+||+|+|. +++++||..|+.+...+|.++++++||+||+.++++.+
T Consensus 3 ~viGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~~vG~~A~~~~~~~p~~t~~~~Kr~iG~~~~d~~v 82 (605)
T 2kho_A 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (605)
T ss_dssp -CEEEECCSSEEEEEEEETTEEEECCCTTSCSSEECEEEECTTSCEEESHHHHTTTTTCGGGEEECGGGTTTCBSSSTTH
T ss_pred CEEEEEcCCcCEEEEEEECCEEEEEECCCCCcccceEEEEECCCcEEECHHHHHHhhhCCCCEeehhhHhhCCCCCcHHH
Confidence 48999999999999999999999999999999999999995 56799999999999999999999999999999999889
Q ss_pred HHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHH
Q psy7140 81 QEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISE 160 (1304)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~ 160 (1304)
+...+.+||.++.. .+|.+.+.+ .++.++|+++++++|++|++.|+
T Consensus 83 ~~~~~~~p~~~~~~------------------------------~~g~~~i~~----~g~~~~~~ei~a~~L~~l~~~ae 128 (605)
T 2kho_A 83 QRDVSIMPFKIIAA------------------------------DNGDAWVEV----KGQKMAPPQISAEVLKKMKKTAE 128 (605)
T ss_dssp HHHHHHCSSCEEEC------------------------------TTSBEEEEE----TTEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEC------------------------------CCCceEEEE----CCEEEcHHHHHHHHHHHHHHHHH
Confidence 98888888876533 345555655 34689999999999999999999
Q ss_pred hhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEE
Q psy7140 161 NEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQV 240 (1304)
Q Consensus 161 ~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dv 240 (1304)
.++|.++.++|||||+||++.||+++++|++.||++++++++||+|||++|++... ..+.++||||+||||||+
T Consensus 129 ~~l~~~v~~~VitVPa~f~d~qr~a~~~A~~~AGl~v~~li~EP~AAAlay~l~~~------~~~~~vlV~DlGGGT~Dv 202 (605)
T 2kho_A 129 DYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG------TGNRTIAVYDLGGGTFDI 202 (605)
T ss_dssp HHHCSCCCEEEEEECTTCCHHHHHHHHHHHHTTTCEEEEEEEHHHHHHHHTTTTSS------SSEEEEEEEEECSSCEEE
T ss_pred HHhCCCCcEEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHhhhccc------CCCCEEEEEECCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999987543 146789999999999999
Q ss_pred EEEEEE----CCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeE
Q psy7140 241 CIAAFV----KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPL 316 (1304)
Q Consensus 241 sv~~~~----~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~ 316 (1304)
|++++. ++.++++++.|+.++||++||+.|++|+.++|+++++.+...+++++.+|+.+||++|+.||.... ..+
T Consensus 203 si~~~~~~~~~g~~~v~a~~gd~~lGG~d~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~aE~~K~~ls~~~~-~~i 281 (605)
T 2kho_A 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ-TDV 281 (605)
T ss_dssp EEEEEECTTTSCEEEEEEEEEESSCSGGGTHHHHHHHHHHHHHHHHSCCSTTCHHHHHHHHHHHHHHHHHTTSSSE-EEE
T ss_pred EEEEEEecCCCCeEEEEEECCCCCccHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHcCCCCc-eEE
Confidence 999998 789999999999999999999999999999999999999989999999999999999999998754 567
Q ss_pred EEeeecCC----cceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCC
Q psy7140 317 NIECFMDD----KDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPP 392 (1304)
Q Consensus 317 ~i~~~~~~----~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~ 392 (1304)
.++++.++ .++.++|||++|+++++|+++++..+++++|+++++.+.+|+.|+||||+||+|+|++.|+++||.++
T Consensus 282 ~l~~~~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~srip~v~~~l~~~fg~~~ 361 (605)
T 2kho_A 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIEPLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEP 361 (605)
T ss_dssp EEEEEEEETTEEEEEEEEEEHHHHHTTCCSTTGGGTSHHHHHHHTTTCCTTTCSEEEEESGGGGSHHHHHHHHHHHSSCC
T ss_pred EecccccCCCCceEEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhhCceEEEECCcccChHHHHHHHHhcCCCc
Confidence 77766542 56778999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCCchhHHHHHHHHHhhHhcCCceeeeeEeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeee
Q psy7140 393 STTLNQDEAVSRGCALQCAILSPAVKIRHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQ 472 (1304)
Q Consensus 393 ~~~~np~eaVa~Gaa~~aa~ls~~~~~~~~~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~ 472 (1304)
..+.||++|||+|||++|+.+++. ++++.++|++|+++++ +..+|.+.+++++++.+|...++.|+++.++|..
T Consensus 362 ~~~~npd~aVA~GAa~~a~~l~~~--~~~~~l~dv~p~slgi--~~~~g~~~~li~r~t~iP~~~~~~f~t~~d~q~~-- 435 (605)
T 2kho_A 362 RKDVNPDEAVAIGAAVQGGVLTGD--VKDVLLLDVTPLSLGI--ETMGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSA-- 435 (605)
T ss_dssp BCSSCTTTHHHHHHHHHHTTTTTS--CCCCCCSBCCCCCEEE--EETTTEEEEEECTTBCSSEEEEEEECCSSTTCCE--
T ss_pred CcCCCcchHHHHHHHHHHHHhcCC--ccCceEEeeeeeeccc--cccCCceEEEEecccccCccceEEEEecCCCceE--
Confidence 999999999999999999999886 4667889999777655 5578888877766665555555555545555443
Q ss_pred eeeecCCCCCCcccccccCCCCCCCCceeEEEEcCCCCCCCcc
Q psy7140 473 AYYDCPVPYPTQFVAYYDCPVPYPTQFVGQFIIKDIKPRTSRQ 515 (1304)
Q Consensus 473 ~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~~i~~i~~~~~g~ 515 (1304)
+.+.+ +++|+.++.+|..||+|.|+||||.|.|.
T Consensus 436 --v~i~v-------~~ge~~~~~~n~~lg~~~l~~i~~~~~g~ 469 (605)
T 2kho_A 436 --VTIHV-------LQGERKRAADNKSLGQFNLDGINPAPRGM 469 (605)
T ss_dssp --EEEEE-------EESSCSBGGGSEEEEEEEEECCCSCCTTC
T ss_pred --EEEEE-------EeccCcccccCcEEeEEEecCCCCCCCCC
Confidence 34443 34667788899999999999999988664
No 10
>2v7y_A Chaperone protein DNAK; HSP70, heat shock protein, ATPase, domain rearrangement; HET: ADP; 2.37A {Geobacillus kaustophilus HTA426}
Probab=100.00 E-value=3.2e-66 Score=634.74 Aligned_cols=432 Identities=29% Similarity=0.485 Sum_probs=378.2
Q ss_pred cEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhHH
Q psy7140 2 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFVQ 81 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~~ 81 (1304)
.+||||||||||+||++.+|.+++++|..|++.+||+|+|.++++++|++|+.+...+| ++++++||+||+.+.
T Consensus 3 ~~iGIDlGTt~s~va~~~~g~~~ii~n~~g~~~~PS~V~~~~~~~~vG~~A~~~~~~~p-~~~~~~Kr~lg~p~~----- 76 (509)
T 2v7y_A 3 KIIGIDLGTTNSCVAVLEGGEVKVIPNPEGNRTTPSVVAFKNGERLVGEVAKRQAITNP-NTIISIKRHMGTDYK----- 76 (509)
T ss_dssp CEEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECEEEESSSSEEESHHHHTTTTTCS-SEEECGGGTTTSCCC-----
T ss_pred CEEEEEcCCceEEEEEEECCEEEEEECCCCCcccceEEEECCCcEEECHHHHHhHHhCC-CcHHHHHHhcCCCcE-----
Confidence 48999999999999999999999999999999999999998888999999999999999 999999999997321
Q ss_pred HHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHHh
Q psy7140 82 EELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISEN 161 (1304)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~~ 161 (1304)
+. . .+..++|+++++++|++|++.|+.
T Consensus 77 -------------------------------------------------~~--~--~g~~~~~~ei~a~~L~~l~~~ae~ 103 (509)
T 2v7y_A 77 -------------------------------------------------VE--I--EGKQYTPQEISAIILQYLKSYAED 103 (509)
T ss_dssp -------------------------------------------------EE--E--TTEEECHHHHHHHHHHHHHHHHHH
T ss_pred -------------------------------------------------EE--E--CCEEEcHHHHHHHHHHHHHHHHHH
Confidence 00 1 234689999999999999999999
Q ss_pred hhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEE
Q psy7140 162 EIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVC 241 (1304)
Q Consensus 162 ~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 241 (1304)
+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|++... .+..+||||+||||||+|
T Consensus 104 ~l~~~~~~~VitvPa~~~~~qr~a~~~a~~~AGl~~~~li~Ep~AAAlay~~~~~-------~~~~vlV~D~GgGT~Dvs 176 (509)
T 2v7y_A 104 YLGEPVTRAVITVPAYFNDAQRQATKDAGRIAGLEVERIINEPTAAALAYGLDKE-------EDQTILVYDLGGGTFDVS 176 (509)
T ss_dssp HHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTGGGS-------CSEEEEEEEECSSCEEEE
T ss_pred HhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEecCHHHHHHHHhhccC-------CCCEEEEEECCCCeEEEE
Confidence 9999999999999999999999999999999999999999999999999997652 467899999999999999
Q ss_pred EEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeEEEeee
Q psy7140 242 IAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECF 321 (1304)
Q Consensus 242 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~~ 321 (1304)
++++.++.++++++.|+.++||++||+.|++++.++|.++++.+...+++++.+|+.+||++|+.||.... ..+.++.+
T Consensus 177 v~~~~~g~~~v~a~~g~~~lGG~d~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~aE~~K~~ls~~~~-~~i~l~~~ 255 (509)
T 2v7y_A 177 ILELGDGVFEVKATAGDNHLGGDDFDQVIIDYLVNQFKQEHGIDLSKDKMALQRLKDAAEKAKKELSGVTQ-TQISLPFI 255 (509)
T ss_dssp EEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCGGGCHHHHHHHHHHHHHHHHHTTTCSE-EEEEEEEE
T ss_pred EEEEcCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHhcCCCCc-EEEEEecc
Confidence 99999999999999999999999999999999999999999988888899999999999999999998653 56777765
Q ss_pred cC---C-cceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCC
Q psy7140 322 MD---D-KDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLN 397 (1304)
Q Consensus 322 ~~---~-~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~n 397 (1304)
.+ | .++.++|||++|+++++|+++++..+++++|+++++.+.+|+.|+||||+|++|+|++.|++.||.++..+.|
T Consensus 256 ~~~~~G~~~~~~~itr~~fe~l~~~~~~~i~~~i~~~L~~a~~~~~~i~~VvLvGG~s~~p~v~~~l~~~f~~~~~~~~~ 335 (509)
T 2v7y_A 256 SANENGPLHLEMTLTRAKFEELSAHLVERTMGPVRQALQDAGLTPADIDKVILVGGSTRIPAVQEAIKRELGKEPHKGVN 335 (509)
T ss_dssp EEETTEEEEEEEEEEHHHHHHHTHHHHHTTHHHHHHHHHHHTCCGGGCSEEEEESGGGGCHHHHHHHHHHHSSCCBCCSC
T ss_pred ccCCCCCeeEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCChhHCcEEEEECCcccChHHHHHHHHHhCCCcCcCCC
Confidence 54 2 4677899999999999999999999999999999999999999999999999999999999999988999999
Q ss_pred chhHHHHHHHHHhhHhcCCceeeeeEeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeec
Q psy7140 398 QDEAVSRGCALQCAILSPAVKIRHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDC 477 (1304)
Q Consensus 398 p~eaVa~Gaa~~aa~ls~~~~~~~~~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~ 477 (1304)
|++|||+|||++|+.+++. ++++.++|++||++++ +..+|.+.+++++++.+|...++.|+++.++|. .+.+
T Consensus 336 p~~aVa~Gaa~~a~~l~~~--~~~~~~~dv~p~slgi--~~~~~~~~~li~~~~~iP~~~~~~f~~~~d~q~----~~~i 407 (509)
T 2v7y_A 336 PDEVVAIGAAIQGGVIAGE--VKDVVLLDVTPLSLGI--ETMGGVFTKLIERNTTIPTSKSQVFTTAADNQT----TVDI 407 (509)
T ss_dssp TTTHHHHHHHHHHHHHHTC--CCCCCCCCBCSSEEEE--EETTTEEEEEECTTCBSSEEEEEEECCSSTTCC----EEEE
T ss_pred chhhhHhhHHHHHHHhcCC--ccCceEEEeeccccce--eecCCceEEEEeCCCcCCcceEEEEEeeccCcE----EEEE
Confidence 9999999999999999886 4567788999776655 557888877666555444444444444445543 3444
Q ss_pred CCCCCCcccccccCCCCCCCCceeEEEEcCCCCCCCcc
Q psy7140 478 PVPYPTQFVAYYDCPVPYPTQFVGQFIIKDIKPRTSRQ 515 (1304)
Q Consensus 478 ~~~~~~~~~~~~e~~~~~~n~~lg~~~i~~i~~~~~g~ 515 (1304)
.+ +++|+.++.+|..||+|.|+|+||.|+|.
T Consensus 408 ~v-------~~ge~~~~~~~~~lg~~~l~~i~~~~~g~ 438 (509)
T 2v7y_A 408 HV-------LQGERPMAADNKSLGRFQLTGIPPAPRGV 438 (509)
T ss_dssp EE-------EEESSSBGGGSEEEEEEEEECCCCCCTTC
T ss_pred EE-------EecCccccccCcEEEEEEEeCCCCCCCcc
Confidence 43 45677778899999999999999988764
No 11
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=1.9e-59 Score=562.61 Aligned_cols=380 Identities=36% Similarity=0.602 Sum_probs=355.0
Q ss_pred CcEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhH
Q psy7140 1 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 80 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~ 80 (1304)
|++||||||||||+||++.+|.++++.|..|++++||+|+|.++++++|..|..+...+|.++++++||+||+.++++.+
T Consensus 23 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~~~ 102 (404)
T 3i33_A 23 MPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDATV 102 (404)
T ss_dssp CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSHHH
T ss_pred CCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcHHH
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHH
Q psy7140 81 QEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISE 160 (1304)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~ 160 (1304)
+...+.+||.++. .+|.+.+.+.+.+....++|+++++++|++|++.++
T Consensus 103 ~~~~~~~p~~~~~-------------------------------~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~ 151 (404)
T 3i33_A 103 QSDMKHWPFRVVS-------------------------------EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAE 151 (404)
T ss_dssp HHHHTTCSSEEEE-------------------------------ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCceEEc-------------------------------cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHH
Confidence 9999999987653 256677888877777899999999999999999999
Q ss_pred hhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEE
Q psy7140 161 NEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQV 240 (1304)
Q Consensus 161 ~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dv 240 (1304)
.+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+..... ....+..+||||+||||||+
T Consensus 152 ~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~---~~~~~~~vlV~D~GgGT~dv 228 (404)
T 3i33_A 152 AYLGGKVHSAVITVPAYFNDSQRQATKDAGTITGLNVLRIINEPTAAAIAYGLDKKG---CAGGEKNVLIFDLGGGTFDV 228 (404)
T ss_dssp HHHSSCCCEEEEEECTTCCHHHHHHHHHHHHHHTCEEEEEEEHHHHHHHHTTTTSSC---SSSSCCEEEEEEECSSCEEE
T ss_pred HHhccCCCcEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEeccHHHHHHHHHhhccc---ccCCCceEEEEECCCCcEEE
Confidence 999999999999999999999999999999999999999999999999999876532 11246789999999999999
Q ss_pred EEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeEEEee
Q psy7140 241 CIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIEC 320 (1304)
Q Consensus 241 sv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~ 320 (1304)
+++++.++.++++++.++..+||++||+.|++++.++|.++++.+...+++.+.+|+.+||++|+.||.... ..+.++.
T Consensus 229 sv~~~~~~~~~v~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~-~~~~~~~ 307 (404)
T 3i33_A 229 SILTIEDGIFEVKSTAGDTHLGGEDFDNRMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSSTQ-ASIEIDS 307 (404)
T ss_dssp EEEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSSE-EEEEEEE
T ss_pred EEEEEeCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCcc-eEEEEee
Confidence 999999999999999999999999999999999999999999999999999999999999999999998654 6788888
Q ss_pred ecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc-CCCCCCCCCch
Q psy7140 321 FMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF-HKPPSTTLNQD 399 (1304)
Q Consensus 321 ~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f-~~~~~~~~np~ 399 (1304)
+.++.++.+.|+|++|+++++++++++..+++++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||+
T Consensus 308 ~~~g~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~ 387 (404)
T 3i33_A 308 LYEGVDFYTSITRARFEELNADLFRGTLEPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPD 387 (404)
T ss_dssp EETTEEEEEEEEHHHHHHHTHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTT
T ss_pred ccCCceeEEEEcHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHH
Confidence 88999999999999999999999999999999999999999999999999999999999999999999 68888999999
Q ss_pred hHHHHHHHHHhhHhcC
Q psy7140 400 EAVSRGCALQCAILSP 415 (1304)
Q Consensus 400 eaVa~Gaa~~aa~ls~ 415 (1304)
+|||+|||++|+++++
T Consensus 388 ~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 388 EAVAYGAAVQAAILIG 403 (404)
T ss_dssp THHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHhcC
Confidence 9999999999999886
No 12
>3i33_A Heat shock-related 70 kDa protein 2; protein-ADP complex, ATP-binding, chaperone, nucleotide-BIND phosphoprotein, stress response; HET: ADP; 1.30A {Homo sapiens} PDB: 4fsv_A* 1hx1_A 3jxu_A* 2qwl_A* 2qw9_A* 2qwm_A* 1hpm_A* 1ngi_A* 1ngj_A* 3hsc_A* 1ngb_A* 3ldq_A* 3fzf_A* 3fzk_A* 3fzl_A* 3fzm_A* 3fzh_A* 3m3z_A* 1ngh_A* 1ngd_A* ...
Probab=100.00 E-value=8.8e-59 Score=556.78 Aligned_cols=382 Identities=36% Similarity=0.597 Sum_probs=359.1
Q ss_pred ccceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCCh
Q psy7140 558 IIMSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDP 637 (1304)
Q Consensus 558 ~~~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~ 637 (1304)
.+|.+||||||||||+||++.+|.++++.|..|++++||+|+|.++++++|..|..+..++|.++++++|+++|+.++++
T Consensus 21 ~~~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~Kr~lg~~~~~~ 100 (404)
T 3i33_A 21 QSMPAIGIDLGTTYSCVGVFQHGKVEIIANDQGNRTTPSYVAFTDTERLIGDAAKNQVAMNPTNTIFDAKRLIGRKFEDA 100 (404)
T ss_dssp --CCCEEEEECSSEEEEEEEETTEEEECCCTTSCSSEECCEEECSSCEEETHHHHHTTTTCSTTEECCGGGTTTCCTTSH
T ss_pred ccCCEEEEEcCCccEEEEEEECCeeEEEECCCCCcccceEEEECCCCEEecHHHHHhhHhChhhhHHHHHHHhCCCCCcH
Confidence 45679999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hHHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHH
Q psy7140 638 FVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLT 717 (1304)
Q Consensus 638 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~ 717 (1304)
.++...+.+||.+.. .+|...+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++
T Consensus 101 ~~~~~~~~~p~~~~~-~~g~~~~~v~~~~~~~~~~~~ei~a~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~ 179 (404)
T 3i33_A 101 TVQSDMKHWPFRVVS-EGGKPKVQVEYKGETKTFFPEEISSMVLTKMKEIAEAYLGGKVHSAVITVPAYFNDSQRQATKD 179 (404)
T ss_dssp HHHHHHTTCSSEEEE-ETTEEEEEEEETTEEEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEEEECTTCCHHHHHHHHH
T ss_pred HHHHHHhhCCceEEc-cCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHHhccCCCcEEEEECCCCCHHHHHHHHH
Confidence 999999999999886 6788888888877778999999999999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHH
Q psy7140 718 AASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDK 797 (1304)
Q Consensus 718 Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~ 797 (1304)
|++.||++++++++||+|||++|+..... ....+..++|||+||||||++++++.++.+++++..++..+||.+||+
T Consensus 180 a~~~AGl~~~~li~Ep~AAa~~~~~~~~~---~~~~~~~vlV~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~ 256 (404)
T 3i33_A 180 AGTITGLNVLRIINEPTAAAIAYGLDKKG---CAGGEKNVLIFDLGGGTFDVSILTIEDGIFEVKSTAGDTHLGGEDFDN 256 (404)
T ss_dssp HHHHHTCEEEEEEEHHHHHHHHTTTTSSC---SSSSCCEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHH
T ss_pred HHHHcCCCeEEEeccHHHHHHHHHhhccc---ccCCCceEEEEECCCCcEEEEEEEEeCCeEEEEEEeCCCCCCHHHHHH
Confidence 99999999999999999999999876531 112578999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHHH
Q psy7140 798 ILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIE 877 (1304)
Q Consensus 798 ~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~ 877 (1304)
.|++++.++|.++++.+...+++.+.+|+.+||++|+.||.+. ...+.++.+.++.++...|+|++|+++++++++++.
T Consensus 257 ~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~~~~~~~~~g~~~~~~i~r~~~~~~~~~~~~~i~ 335 (404)
T 3i33_A 257 RMVSHLAEEFKRKHKKDIGPNKRAVRRLRTACERAKRTLSSST-QASIEIDSLYEGVDFYTSITRARFEELNADLFRGTL 335 (404)
T ss_dssp HHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTSS-EEEEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHTH
T ss_pred HHHHHHHHHHHHHhCCCcCCCHHHHHHHHHHHHHHHHhCCcCc-ceEEEEeeccCCceeEEEEcHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999865 467888999999999999999999999999999999
Q ss_pred HHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc-CCCCCCCCCchhHHHhHHHHHhhHhcC
Q psy7140 878 ICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF-HKPPSTTLNQDEAVSRGCALQCAILSP 944 (1304)
Q Consensus 878 ~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f-g~~~~~~~n~~eava~Gaa~~aa~ls~ 944 (1304)
.+++++|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+++
T Consensus 336 ~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~~ 403 (404)
T 3i33_A 336 EPVEKALRDAKLDKGQIQEIVLVGGSTRIPKIQKLLQDFFNGKELNKSINPDEAVAYGAAVQAAILIG 403 (404)
T ss_dssp HHHHHHHHHHTCCGGGCCEEEEESGGGGCHHHHHHHHHHTTTCCCBCSSCTTTHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHcCCCHhhCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999 788889999999999999999999875
No 13
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=8.9e-58 Score=546.88 Aligned_cols=375 Identities=37% Similarity=0.613 Sum_probs=352.4
Q ss_pred cEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhHH
Q psy7140 2 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFVQ 81 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~~ 81 (1304)
.+||||||||||+||++.+|.++++.|..|++++||+|+|.++++++|+.|......+|.++++++||+||+.++++.++
T Consensus 19 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~~ 98 (394)
T 3qfu_A 19 TVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSVQ 98 (394)
T ss_dssp SCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHHH
T ss_pred CEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHHH
Confidence 36999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHHh
Q psy7140 82 EELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISEN 161 (1304)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~~ 161 (1304)
...+.+||.++. .+|.+.+.+.+.+....++|+++++++|++|++.++.
T Consensus 99 ~~~~~~~~~~~~-------------------------------~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~ 147 (394)
T 3qfu_A 99 KDIKHLPFNVVN-------------------------------KDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAED 147 (394)
T ss_dssp HHHTTCSSEEEE-------------------------------ETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCeEEEc-------------------------------CCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHH
Confidence 999999987652 3566777777777778999999999999999999999
Q ss_pred hhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEE
Q psy7140 162 EIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVC 241 (1304)
Q Consensus 162 ~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvs 241 (1304)
+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|++... ..+..+||||+||||||++
T Consensus 148 ~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~------~~~~~vlV~D~Gggt~dvs 221 (394)
T 3qfu_A 148 YLGTKVTHAVVTVPAYFNDAQRQATKDAGTIAGLNVLRIVNEPTAAAIAYGLDKS------DKEHQIIVYDLGGGTFDVS 221 (394)
T ss_dssp HHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTTTSC------SSCEEEEEEEECSSCEEEE
T ss_pred hcCCCcceEEEEECCCCCHHHHHHHHHHHHHcCCceEEEecCHHHHHHHHhhccC------CCCceEEEEEcCCCceeEE
Confidence 9999999999999999999999999999999999999999999999999987553 2467899999999999999
Q ss_pred EEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeEEEeee
Q psy7140 242 IAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECF 321 (1304)
Q Consensus 242 v~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~~ 321 (1304)
++++.++.++++++.++.++||++||+.|++++.++|.++++.+...+++.+.+|+.+||++|+.||.... ..+.++.+
T Consensus 222 v~~~~~~~~~~~~~~~~~~lGG~~~d~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~-~~~~~~~~ 300 (394)
T 3qfu_A 222 LLSIENGVFEVQATSGDTHLGGEDFDYKIVRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQMS-TRIEIDSF 300 (394)
T ss_dssp EEEEETTEEEEEEEEEETTCSHHHHHHHHHHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCSE-EEEEEEEE
T ss_pred EEEEeCCEEEEEEEcCCCCCChHHHHHHHHHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCCc-EEEEEEec
Confidence 99999999999999999999999999999999999999999999999999999999999999999998754 57788888
Q ss_pred cCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc-CCCCCCCCCchh
Q psy7140 322 MDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF-HKPPSTTLNQDE 400 (1304)
Q Consensus 322 ~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f-~~~~~~~~np~e 400 (1304)
.++.++.+.++|++|+++++++++++..+++++|+++++...+|+.|+|+||+|++|+|++.|++.| +.++....||++
T Consensus 301 ~~~~~~~~~i~r~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ 380 (394)
T 3qfu_A 301 VDGIDLSETLTRAKFEELNLDLFKKTLKPVEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDE 380 (394)
T ss_dssp ETTEEEEEEEEHHHHHHHHHHHHHHTHHHHHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTT
T ss_pred cCCceeEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHH
Confidence 8999999999999999999999999999999999999999999999999999999999999999999 688889999999
Q ss_pred HHHHHHHHHhhHhc
Q psy7140 401 AVSRGCALQCAILS 414 (1304)
Q Consensus 401 aVa~Gaa~~aa~ls 414 (1304)
|||+|||++|++++
T Consensus 381 ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 381 AVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhhC
Confidence 99999999999875
No 14
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=5.9e-58 Score=549.86 Aligned_cols=379 Identities=25% Similarity=0.412 Sum_probs=339.5
Q ss_pred CcEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhH
Q psy7140 1 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 80 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~ 80 (1304)
|.+||||||||||+||++.+|.++++.|..|++++||+|+|.++++++|..|..+..++|.++++++||++|+.+++..+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999998765433
Q ss_pred HHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEec----CCceEeCHHHHHHHHHHHHH
Q psy7140 81 QEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYL----NKEHVFSPEQLTAMLFTKLK 156 (1304)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~----~~~~~~~~~el~~~~L~~lk 156 (1304)
+.. ..++. ....+|.+.+.+... +.++.++|+++++++|++|+
T Consensus 93 ~~~--~~~~~-------------------------------~~~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~ 139 (409)
T 4gni_A 93 THN--HASAH-------------------------------PQEAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLV 139 (409)
T ss_dssp GGG--TTSCC-------------------------------CEEETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHH
T ss_pred hhh--ccccc-------------------------------eecCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHH
Confidence 221 11111 123467777877665 35678999999999999999
Q ss_pred HHHHhhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCC
Q psy7140 157 DISENEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYS 236 (1304)
Q Consensus 157 ~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~Ggg 236 (1304)
+.++.+++.++.++|||||++|++.||+++++|++.||++++++++||+|||++|+..... ...+..+||||+|||
T Consensus 140 ~~a~~~~~~~~~~~vitvPa~~~~~~r~~~~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~~----~~~~~~vlv~D~GgG 215 (409)
T 4gni_A 140 GAASEYLGKKVTSAVITIPTNFTEKQKAALIAAAAAADLEVLQLISEPAAAVLAYDARPEA----TISDKIIVVADLGGS 215 (409)
T ss_dssp HHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEEEEEHHHHHHHHTTC----------CCEEEEEEEECSS
T ss_pred HHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEEEEcCHHHHHHHHhccccc----CCCCCEEEEEECCCC
Confidence 9999999999999999999999999999999999999999999999999999999875421 135678999999999
Q ss_pred eEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcC--CCCCCCHHHHHHHHHHHHHhhhccccCCcee
Q psy7140 237 ALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYK--IDPRTNARAYIRLLSEIEKLKKQMSANSNKL 314 (1304)
Q Consensus 237 T~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~--~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~ 314 (1304)
|||+|++++.++.++++++.++..+||++||+.|++++..+|..+++ .+...+.+.+.+|+.+||++|+.||.+.. .
T Consensus 216 T~dvsv~~~~~~~~~v~~~~~~~~lGG~~~d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~-~ 294 (409)
T 4gni_A 216 RSDVTVLASRSGMYTILATVHDYEYHGIALDKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRSTN-A 294 (409)
T ss_dssp CEEEEEEEEETTEEEEEEEEEESSSSHHHHHHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSSE-E
T ss_pred ceEEEEEEEeCCeEEEEEecCCCCcCHHHHHHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCCc-e
Confidence 99999999999999999999999999999999999999999999988 88888999999999999999999998754 6
Q ss_pred eEEEeeecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCC--
Q psy7140 315 PLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPP-- 392 (1304)
Q Consensus 315 ~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~-- 392 (1304)
.+.++.+.++.++...|||++|+++++++++++..+|+++|+++++...+|+.|+|+||+|++|+|++.|++.||..+
T Consensus 295 ~i~i~~~~~~~~~~~~itr~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v 374 (409)
T 4gni_A 295 SFSVESLIDGLDFASTINRLRYETIARTVFEGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRI 374 (409)
T ss_dssp EEEEEEEETTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEE
T ss_pred EEEeecccCCcceEEEeeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCcccc
Confidence 788888899999999999999999999999999999999999999999999999999999999999999999998652
Q ss_pred ------CCCCCchhHHHHHHHHHhhHhcCCc
Q psy7140 393 ------STTLNQDEAVSRGCALQCAILSPAV 417 (1304)
Q Consensus 393 ------~~~~np~eaVa~Gaa~~aa~ls~~~ 417 (1304)
....||++|||+|||++|+......
T Consensus 375 ~~P~~~~~~~~p~~ava~GAa~~~~~~~~~~ 405 (409)
T 4gni_A 375 LAPSTDPSALNPSELQARGAALQASLIQEHH 405 (409)
T ss_dssp ESTTTCTTCCCTTTHHHHHHHHHHHHHHC--
T ss_pred ccccccCCCcCHHHHHHHHHHHHhhhhhhhh
Confidence 6789999999999999999876543
No 15
>3qfu_A 78 kDa glucose-regulated protein homolog; HSP70, KAR2, BIP, chaperone; HET: ADP; 1.80A {Saccharomyces cerevisiae} PDB: 3qfp_A 3qml_A 3ldo_A* 3ldl_A 3ldn_A* 3ldp_A*
Probab=100.00 E-value=2.3e-57 Score=543.37 Aligned_cols=376 Identities=37% Similarity=0.607 Sum_probs=357.5
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChhH
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 639 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~~ 639 (1304)
..+||||||||+|+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+...+|.++++++|+++|+.++++.+
T Consensus 18 ~~viGID~GTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~vG~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 97 (394)
T 3qfu_A 18 GTVIGIDLGTTYSCVAVMKNGKTEILANEQGNRITPSYVAFTDDERLIGDAAKNQVAANPQNTIFDIKRLIGLKYNDRSV 97 (394)
T ss_dssp CSCEEEEECSSEEEEEEECSSCEEECCCTTSCSSEECCEEECSSCEEESHHHHHTGGGCGGGEECCGGGTTTCCTTCHHH
T ss_pred CCEEEEEeCcCcEEEEEEECCeeEEEECCCCCEeeceEEEEeCCcEEecHHHHHhhHhCcccCHHHHHHHhCCCCCcHHH
Confidence 46899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHHH
Q psy7140 640 QEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTAA 719 (1304)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~Aa 719 (1304)
+...+++||.++ ..++...+.+.+.++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++++|+
T Consensus 98 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ei~a~~l~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a~ 176 (394)
T 3qfu_A 98 QKDIKHLPFNVV-NKDGKPAVEVSVKGEKKVFTPEEISGMILGKMKQIAEDYLGTKVTHAVVTVPAYFNDAQRQATKDAG 176 (394)
T ss_dssp HHHHTTCSSEEE-EETTEEEEEEESSSSEEEECHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHHHHHH
T ss_pred HHHhhcCCeEEE-cCCCceEEEEEeCCCceEEcHHHHHHHHHHHHHHHHHHhcCCCcceEEEEECCCCCHHHHHHHHHHH
Confidence 999999999988 6678888888887778899999999999999999999999999999999999999999999999999
Q ss_pred HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHH
Q psy7140 720 SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKIL 799 (1304)
Q Consensus 720 ~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l 799 (1304)
+.||++++++++||+|||++|++... +.+..++|||+||||||++++++.++.+++++..++..+||.+||+.|
T Consensus 177 ~~aGl~~~~li~Ep~Aaa~~~~~~~~------~~~~~vlV~D~Gggt~dvsv~~~~~~~~~~~~~~~~~~lGG~~~d~~l 250 (394)
T 3qfu_A 177 TIAGLNVLRIVNEPTAAAIAYGLDKS------DKEHQIIVYDLGGGTFDVSLLSIENGVFEVQATSGDTHLGGEDFDYKI 250 (394)
T ss_dssp HHTTCEEEEEEEHHHHHHHHTTTTSC------SSCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEETTCSHHHHHHHH
T ss_pred HHcCCceEEEecCHHHHHHHHhhccC------CCCceEEEEEcCCCceeEEEEEEeCCEEEEEEEcCCCCCChHHHHHHH
Confidence 99999999999999999999987542 357889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHHHHH
Q psy7140 800 AEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEIC 879 (1304)
Q Consensus 800 ~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~ 879 (1304)
++++.++|.++++.+...+++.+.+|+.+||++|+.||.+. ...+.++.+.++.++...++|++|+++++++++++..+
T Consensus 251 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~~~~~~~~~~~~~~~~i~r~~~~~~~~~~~~~i~~~ 329 (394)
T 3qfu_A 251 VRQLIKAFKKKHGIDVSDNNKALAKLKREAEKAKRALSSQM-STRIEIDSFVDGIDLSETLTRAKFEELNLDLFKKTLKP 329 (394)
T ss_dssp HHHHHHHHHHHHSCCCTTCHHHHHHHHHHHHHHHHHTTTCS-EEEEEEEEEETTEEEEEEEEHHHHHHHHHHHHHHTHHH
T ss_pred HHHHHHHHHHHcCCCCCcCHHHHHHHHHHHHHHHHHcccCC-cEEEEEEeccCCceeEEEEEHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999865 46788888999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc-CCCCCCCCCchhHHHhHHHHHhhHhc
Q psy7140 880 LNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF-HKPPSTTLNQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 880 i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f-g~~~~~~~n~~eava~Gaa~~aa~ls 943 (1304)
++++|+.+++...+|+.|+|+||+|++|+|++.|++.| +.++..+.||++|||+|||++|+.+|
T Consensus 330 i~~~l~~~~~~~~~i~~VvLvGG~s~~p~l~~~l~~~~~~~~v~~~~~p~~ava~Gaa~~a~~ls 394 (394)
T 3qfu_A 330 VEKVLQDSGLEKKDVDDIVLVGGSTRIPKVQQLLESYFDGKKASKGINPDEAVAYGAAVQAGVLS 394 (394)
T ss_dssp HHHHHHHHTCCGGGCCEEEEESGGGGSHHHHHHHHHHTTTCCCBCCSCTTTHHHHHHHHHHHHHC
T ss_pred HHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCCCCCCCcCHHHHHHHHHHHHHHhhC
Confidence 99999999999899999999999999999999999999 78899999999999999999999875
No 16
>4gni_A Putative heat shock protein; HSP70-type ATPase, ATP binding protein, magnesium binding, C translational chaperone; HET: ATP; 1.80A {Chaetomium thermophilum var}
Probab=100.00 E-value=2.1e-57 Score=545.17 Aligned_cols=379 Identities=25% Similarity=0.405 Sum_probs=344.0
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChhH
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 639 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~~ 639 (1304)
+.+||||||||||+||++.+|.++++.|..|.+++||+|+|.++++++|..|..+..++|.+++.++|+++|+.++++.+
T Consensus 13 ~~vvGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~G~~A~~~~~~~~~~~i~~~K~llg~~~~~~~~ 92 (409)
T 4gni_A 13 RVVIGITFGNSNSSIAHTVDDKAEVIANEDGDRQIPTILSYVDGDEYYGQQAKNFLVRNPKNTVAYFRDILGQDFKSVDP 92 (409)
T ss_dssp CCEEEEEECSSEEEEEEEETTEEEEECCTTSCSSEECEEEEETTEEEEHHHHHHHHHHCGGGEEESCGGGTTCCGGGCCC
T ss_pred CcEEEEEcCCCeEEEEEEeCCceEEEECCCCCccCceEEEECCCcEEEcHHHHHhhHhChHhhHHHHHHHhCCCccchhh
Confidence 47999999999999999988999999999999999999999999999999999999999999999999999999887655
Q ss_pred HHhhccCCceeeecCCCceEEEEEec----CCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHH
Q psy7140 640 QEELKSMPFQSLKQNDGSIGIKVNYL----NKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKAL 715 (1304)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l 715 (1304)
+... .++... ..+|.+.+.+... ++...++|+++++++|++|++.++.+++.++.++|||||++|++.||+++
T Consensus 93 ~~~~--~~~~~~-~~~g~~~~~v~~~~~~~~~~~~~~~~ev~~~~L~~l~~~a~~~~~~~~~~~vitvPa~~~~~~r~~~ 169 (409)
T 4gni_A 93 THNH--ASAHPQ-EAGDNVVFTIKDKAEEDAEPSTLTVSEIATRYLRRLVGAASEYLGKKVTSAVITIPTNFTEKQKAAL 169 (409)
T ss_dssp GGGT--TSCCCE-EETTEEEEEECCSSCSSCCCEEEEHHHHHHHHHHHHHHHHHHHHTSCCCEEEEEECTTCCHHHHHHH
T ss_pred hhhc--ccccee-cCCCcEEEEEecCCCCCCcceEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHH
Confidence 4432 333332 3577888887654 35678999999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHH
Q psy7140 716 LTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNI 795 (1304)
Q Consensus 716 ~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~ 795 (1304)
++|++.|||+++++++||+|||++|+.... ....+..+||||+||||||+|++++.++.++++++.++..+||.+|
T Consensus 170 ~~a~~~AGl~~~~li~Ep~AAa~~~~~~~~----~~~~~~~vlv~D~GgGT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~ 245 (409)
T 4gni_A 170 IAAAAAADLEVLQLISEPAAAVLAYDARPE----ATISDKIIVVADLGGSRSDVTVLASRSGMYTILATVHDYEYHGIAL 245 (409)
T ss_dssp HHHHHHTTCEEEEEEEHHHHHHHHTTC----------CCEEEEEEEECSSCEEEEEEEEETTEEEEEEEEEESSSSHHHH
T ss_pred HHHHHHcCCCeEEEEcCHHHHHHHHhcccc----cCCCCCEEEEEECCCCceEEEEEEEeCCeEEEEEecCCCCcCHHHH
Confidence 999999999999999999999999987532 1256789999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcC--CCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHH
Q psy7140 796 DKILAEYISTDFVKRYK--IDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIF 873 (1304)
Q Consensus 796 D~~l~~~l~~~~~~~~~--~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~ 873 (1304)
|+.|++++..+|..+++ .++..+++++.+|+.+||++|+.||.+. ...+.++++.++.++...|||++|++++++++
T Consensus 246 d~~i~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~-~~~i~i~~~~~~~~~~~~itr~~~~~~~~~~~ 324 (409)
T 4gni_A 246 DKVLIDHFSKEFLKKNPGAKDPRENPRSLAKLRLEAESTKRALSRST-NASFSVESLIDGLDFASTINRLRYETIARTVF 324 (409)
T ss_dssp HHHHHHHHHHHHHHHSTTCCCGGGSHHHHHHHHHHHHHHHHHHHHSS-EEEEEEEEEETTEEEEEEEEHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCCCcccCHHHHHHHHHHHHHHHHhCCCCC-ceEEEeecccCCcceEEEeeHHHHHHHHHHHH
Confidence 99999999999999998 8888999999999999999999999875 46889999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCC--C------CCCCCchhHHHhHHHHHhhHhcCC
Q psy7140 874 GRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP--P------STTLNQDEAVSRGCALQCAILSPA 945 (1304)
Q Consensus 874 ~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~--~------~~~~n~~eava~Gaa~~aa~ls~~ 945 (1304)
+++..+|+++|+.+++...+|+.|+|+||+||+|+|++.|++.||.+ + ....||++|||+|||++|+.....
T Consensus 325 ~~i~~~i~~~l~~~~~~~~~i~~V~LvGG~s~~p~v~~~l~~~f~~~~~v~~P~~~~~~~~p~~ava~GAa~~~~~~~~~ 404 (409)
T 4gni_A 325 EGFNRLVESAVKKAGLDPLDVDEVIMSGGTSNTPRIAANFRYIFPESTRILAPSTDPSALNPSELQARGAALQASLIQEH 404 (409)
T ss_dssp HHHHHHHHHHHHHTTCCGGGCCEEEEESGGGGCHHHHHHHHHHSCTTSEEESTTTCTTCCCTTTHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHcCCCHHHCCEEEEECCccccHHHHHHHHHHcCCccccccccccCCCcCHHHHHHHHHHHHhhhhhhh
Confidence 99999999999999999999999999999999999999999999875 3 678999999999999999987665
Q ss_pred c
Q psy7140 946 V 946 (1304)
Q Consensus 946 ~ 946 (1304)
.
T Consensus 405 ~ 405 (409)
T 4gni_A 405 H 405 (409)
T ss_dssp -
T ss_pred h
Confidence 3
No 17
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=6.1e-56 Score=528.17 Aligned_cols=372 Identities=33% Similarity=0.552 Sum_probs=334.6
Q ss_pred cEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcC-CceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhH
Q psy7140 2 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSD-KNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 80 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~-~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~ 80 (1304)
.+||||||||||+||++.+|.++++.|..|++.+||+|+|.. +++++|+.|+.....+|+++++++||+||+.++++.+
T Consensus 3 ~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~~ 82 (383)
T 1dkg_D 3 KIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEEV 82 (383)
T ss_dssp CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHHH
T ss_pred cEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHHH
Confidence 489999999999999999999999999999999999999964 6788999999999999999999999999999988888
Q ss_pred HHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHH
Q psy7140 81 QEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISE 160 (1304)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~ 160 (1304)
+...+.+||.++.. .++.+.+.+ +++.++|+++++++|++|++.|+
T Consensus 83 ~~~~~~~p~~~~~~------------------------------~~~~~~~~~----~g~~~~~~~i~~~~L~~l~~~a~ 128 (383)
T 1dkg_D 83 QRDVSIMPFKIIAA------------------------------DNGDAWVEV----KGQKMAPPQISAEVLKKMKKTAE 128 (383)
T ss_dssp HHHTTTCSSEEEEC------------------------------SSSBEEEEE----TTEEECHHHHHHHHHHHHHHHHH
T ss_pred HHHhhcCCeEEEEc------------------------------CCCcEEEEE----CCEEEcHHHHHHHHHHHHHHHHH
Confidence 88888888875432 344555554 34689999999999999999999
Q ss_pred hhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEE
Q psy7140 161 NEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQV 240 (1304)
Q Consensus 161 ~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dv 240 (1304)
.+++.++.++|||||++|++.||+++++|++.||++++.+++||+|||++|+.... ..+..+||||+||||||+
T Consensus 129 ~~~~~~~~~~vitvP~~~~~~~r~~~~~a~~~aGl~~~~li~Ep~Aaa~~~~~~~~------~~~~~~lVvD~Gggttdv 202 (383)
T 1dkg_D 129 DYLGEPVTEAVITVPAYFNDAQRQATKDAGRIAGLEVKRIINEPTAAALAYGLDKG------TGNRTIAVYDLGGGTFDI 202 (383)
T ss_dssp HHHSSCCCEEEECBCTTCCHHHHHHHHHHHHHTTCEESCCCBHHHHHHHHHTCCC-------CCEEEEEEEEECSSCEEE
T ss_pred HHhCCCCCeEEEEECCCCCHHHHHHHHHHHHHcCCceEEEeccHHHHHHHHHhccC------CCCcEEEEEEcCCCeEEE
Confidence 99999999999999999999999999999999999999999999999999986432 145789999999999999
Q ss_pred EEEEEE----CCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeE
Q psy7140 241 CIAAFV----KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPL 316 (1304)
Q Consensus 241 sv~~~~----~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~ 316 (1304)
++++.. ++.++++++.++..+||++||+.|++++.++|..+++.+...+++.+.+|+.+||++|+.||.... ..+
T Consensus 203 sv~~~~~~~~~~~~~v~~~~~~~~lGG~~id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~-~~i 281 (383)
T 1dkg_D 203 SIIEIDEVDGEKTFEVLATNGDTHLGGEDFDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ-TDV 281 (383)
T ss_dssp EEEEEEC----CCCEEEEEEEESSCSHHHHHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSE-EEE
T ss_pred EEEEEEecCCCCeEEEEEEeCCCCCCHHHHHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCc-eEE
Confidence 999998 678899999999999999999999999999999999988888899999999999999999998653 456
Q ss_pred EEeeecC---C-cceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCC
Q psy7140 317 NIECFMD---D-KDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPP 392 (1304)
Q Consensus 317 ~i~~~~~---~-~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~ 392 (1304)
.++.+.+ | .++.++|+|++|+++++|+++++.++++++|+++++.+.+++.|+|+||+|++|+|++.|++.|+.++
T Consensus 282 ~i~~~~~~~~G~~~~~~~it~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v 361 (383)
T 1dkg_D 282 NLPYITADATGPKHMNIKVTRAKLESLVEDLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEP 361 (383)
T ss_dssp EEEEEEEETTEEEEEEEEEEHHHHHHHSHHHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCC
T ss_pred EEecccccCCCCeeEEEEEeHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCC
Confidence 6665443 2 45678999999999999999999999999999999988999999999999999999999999999888
Q ss_pred CCCCCchhHHHHHHHHHhhHhc
Q psy7140 393 STTLNQDEAVSRGCALQCAILS 414 (1304)
Q Consensus 393 ~~~~np~eaVa~Gaa~~aa~ls 414 (1304)
....||++|||+|||++|++++
T Consensus 362 ~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 362 RKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp BCSSCTTTHHHHHHHHHTTTTC
T ss_pred CCCcChHHHHHHHHHHHHHhhC
Confidence 8999999999999999999775
No 18
>1dkg_D Molecular chaperone DNAK; HSP70, GRPE, nucleotide exchange factor, coiled-coil, complex (HSP24/HSP70); 2.80A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1
Probab=100.00 E-value=9.7e-56 Score=526.40 Aligned_cols=373 Identities=33% Similarity=0.547 Sum_probs=341.8
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeC-CceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChh
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSD-KNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPF 638 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~-~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~ 638 (1304)
+.+||||||||||+||++.+|.++++.|+.|.+++||+|+|.. ++++||..|..+...+|+++++++|++||+.++++.
T Consensus 2 ~~~vGIDlGTt~s~va~~~~g~~~ii~~~~g~~~~PS~v~~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lg~~~~~~~ 81 (383)
T 1dkg_D 2 GKIIGIDLGTTNSCVAIMDGTTPRVLENAEGDRTTPSIIAYTQDGETLVGQPAKRQAVTNPQNTLFAIKRLIGRRFQDEE 81 (383)
T ss_dssp -CCCEEECCSSEEEEEEEETTEEEECCCTTSCSEEECEEEECTTSCEEESHHHHTTSTTCGGGEEECGGGTTTCBSCSHH
T ss_pred CcEEEEEcCCCCEEEEEEECCeeEEEECCCCCcccceEEEEECCCCEEECHHHHHhhhhCccceeehhHHhhCCCCCcHH
Confidence 3689999999999999999999999999999999999999964 678999999999999999999999999999999998
Q ss_pred HHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHH
Q psy7140 639 VQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTA 718 (1304)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~A 718 (1304)
++...+.+||.++...++...+.+ .+..++|+++++++|+++++.++.+++.++.++|||||++|++.||+++++|
T Consensus 82 ~~~~~~~~p~~~~~~~~~~~~~~~----~g~~~~~~~i~~~~L~~l~~~a~~~~~~~~~~~vitvP~~~~~~~r~~~~~a 157 (383)
T 1dkg_D 82 VQRDVSIMPFKIIAADNGDAWVEV----KGQKMAPPQISAEVLKKMKKTAEDYLGEPVTEAVITVPAYFNDAQRQATKDA 157 (383)
T ss_dssp HHHHTTTCSSEEEECSSSBEEEEE----TTEEECHHHHHHHHHHHHHHHHHHHHSSCCCEEEECBCTTCCHHHHHHHHHH
T ss_pred HHHHhhcCCeEEEEcCCCcEEEEE----CCEEEcHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEECCCCCHHHHHHHHHH
Confidence 998888999998878888877766 2458999999999999999999999998899999999999999999999999
Q ss_pred HHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEE----CCeEEEEEEecCCCCCcHH
Q psy7140 719 ASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV----KGKLKVLSNVCDSEIGGRN 794 (1304)
Q Consensus 719 a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~----~~~~~v~~~~~~~~lGG~~ 794 (1304)
++.||++++++++||+|||++|++... ..+..+||||+||||||++++++. ++.++++++.++..+||++
T Consensus 158 ~~~aGl~~~~li~Ep~Aaa~~~~~~~~------~~~~~~lVvD~Gggttdvsv~~~~~~~~~~~~~v~~~~~~~~lGG~~ 231 (383)
T 1dkg_D 158 GRIAGLEVKRIINEPTAAALAYGLDKG------TGNRTIAVYDLGGGTFDISIIEIDEVDGEKTFEVLATNGDTHLGGED 231 (383)
T ss_dssp HHHTTCEESCCCBHHHHHHHHHTCCC-------CCEEEEEEEEECSSCEEEEEEEEEC----CCCEEEEEEEESSCSHHH
T ss_pred HHHcCCceEEEeccHHHHHHHHHhccC------CCCcEEEEEEcCCCeEEEEEEEEEecCCCCeEEEEEEeCCCCCCHHH
Confidence 999999999999999999999987432 256789999999999999999998 5788999998999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecC---C-cceEEEecHHHHHHHHH
Q psy7140 795 IDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMD---D-KDVHAELKRNDLETLCE 870 (1304)
Q Consensus 795 ~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~---~-~d~~~~itr~efe~l~~ 870 (1304)
||+.|++++.++|..+++.++..+++.+.+|+.+||++|+.||.... ..+.++.+.+ + .++.++|+|++|+++++
T Consensus 232 id~~l~~~l~~~~~~~~~~~~~~~~~~~~~l~~~ae~~K~~ls~~~~-~~i~i~~~~~~~~G~~~~~~~it~~~~~~~~~ 310 (383)
T 1dkg_D 232 FDSRLINYLVEEFKKDQGIDLRNDPLAMQRLKEAAEKAKIELSSAQQ-TDVNLPYITADATGPKHMNIKVTRAKLESLVE 310 (383)
T ss_dssp HHHHHHHHHHHHHHHHHCCCSTTCHHHHHHHHHHHHHHHHHTTSSSE-EEEEEEEEEEETTEEEEEEEEEEHHHHHHHSH
T ss_pred HHHHHHHHHHHHHHHHhCCCcccCHHHHHHHHHHHHHHHHHhCCCCc-eEEEEecccccCCCCeeEEEEEeHHHHHHHHH
Confidence 99999999999999999999888999999999999999999998653 5677776654 2 56678999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhc
Q psy7140 871 HIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 871 ~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls 943 (1304)
++++++.++++++|+.+++...+|+.|+|+||+|++|+|++.|++.|+.++..+.||++|||+|||++|+.|+
T Consensus 311 ~~~~~i~~~i~~~l~~~~~~~~~i~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~l~ 383 (383)
T 1dkg_D 311 DLVNRSIELLKVALQDAGLSVSDIDDVILVGGQTRMPMVQKKVAEFFGKEPRKDVNPDEAVAIGAAVQGGVLT 383 (383)
T ss_dssp HHHHHHHHHHHHHHHTTTCCTTTCCEEEEESGGGGSHHHHHHHHHHHSSCCBCSSCTTTHHHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHcCCCHhhCCEEEEecCccccHHHHHHHHHHhCCCCCCCcChHHHHHHHHHHHHHhhC
Confidence 9999999999999999999888999999999999999999999999999899999999999999999998764
No 19
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=4.4e-38 Score=368.31 Aligned_cols=311 Identities=19% Similarity=0.253 Sum_probs=239.0
Q ss_pred cEEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCC--ce-EEcHhHHHhhhhCCCcccccchhhcCCCCCCh
Q psy7140 2 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDK--NR-ILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDP 78 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~--~~-~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~ 78 (1304)
.+|||||||+||++++..+| .++ .+||+|+|.++ ++ ++|++|+....++|.++...
T Consensus 4 ~~igIDlGT~~s~v~~~~~~--~~~-------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~------------ 62 (344)
T 1jce_A 4 KDIGIDLGTANTLVFLRGKG--IVV-------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI------------ 62 (344)
T ss_dssp CEEEEEECSSEEEEEETTTE--EEE-------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE------------
T ss_pred ceEEEEcCcCcEEEEECCCC--EEE-------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE------------
Confidence 58999999999999875333 222 27999999865 33 69999998877777665321
Q ss_pred hHHHHhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHH
Q psy7140 79 FVQEELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDI 158 (1304)
Q Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~ 158 (1304)
.|+. +|.+ .....++++++++|++++..
T Consensus 63 --------~p~~-----------------------------------~g~i---------~~~~~~~~i~~~~l~~~~~~ 90 (344)
T 1jce_A 63 --------RPMR-----------------------------------DGVI---------ADYTVALVMLRYFINKAKGG 90 (344)
T ss_dssp --------CCEE-----------------------------------TTEE---------SSHHHHHHHHHHHHHHHHTS
T ss_pred --------ecCC-----------------------------------CCee---------CChHHHHHHHHHHHHHHhhc
Confidence 1111 0100 00113566777777666542
Q ss_pred HHhhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeE
Q psy7140 159 SENEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSAL 238 (1304)
Q Consensus 159 a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~ 238 (1304)
..++ ...+|||||++|++.||+++++|++.||++++.+++||+|||++|+... ..+..+||||+|||||
T Consensus 91 --~~~~--~~~~vitvP~~~~~~~r~~~~~a~~~aG~~~~~li~ep~Aaa~~~~~~~-------~~~~~~lVvDiGggtt 159 (344)
T 1jce_A 91 --MNLF--KPRVVIGVPIGITDVERRAILDAGLEAGASKVFLIEEPMAAAIGSNLNV-------EEPSGNMVVDIGGGTT 159 (344)
T ss_dssp --CCSC--CCEEEEEECTTCCHHHHHHHHHHHHHTTCSEEEEEEHHHHHHHHTTCCT-------TSSSCEEEEEECSSCE
T ss_pred --cccC--CCeEEEEECCCCCHHHHHHHHHHHHHcCCCeEeccCCHHHHHHhcCCCC-------CCCceEEEEEeCCCeE
Confidence 1233 3789999999999999999999999999999999999999999997643 2346789999999999
Q ss_pred EEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCce-----
Q psy7140 239 QVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNK----- 313 (1304)
Q Consensus 239 dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~----- 313 (1304)
|+++++.. ... ..++..+||++||+.|++++.+++ +.+.. ...||++|+.|+.....
T Consensus 160 dvsv~~~~--~~~---~~~~~~lGG~~id~~l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~ 221 (344)
T 1jce_A 160 EVAVISLG--SIV---TWESIRIAGDEMDEAIVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDE 221 (344)
T ss_dssp EEEEEETT--EEE---EEEEESCSHHHHHHHHHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHH
T ss_pred EEEEEEcC--CEE---eeCCCCccChhHHHHHHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCc
Confidence 99998763 221 245779999999999999987654 33221 46799999999975421
Q ss_pred eeEEEe--eecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCC--CCcc-cEEEEEcCCCCchhHHHHHHHhc
Q psy7140 314 LPLNIE--CFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLP--VNAI-HSIEIVGGSSRIPAFKNVIESVF 388 (1304)
Q Consensus 314 ~~~~i~--~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~--~~~i-~~ViLvGG~sr~p~v~~~l~~~f 388 (1304)
..+.++ .+.+|.++.++|+|++|+++++|+++++.+.|+++|++++.. .+.+ +.|+|+||+|++|.|++.|++.|
T Consensus 222 ~~~~~~~~~~~~g~~~~~~i~~~~~~~~~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~ 301 (344)
T 1jce_A 222 LETTVSGIDLSTGLPRKLTLKGGEVREALRSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKET 301 (344)
T ss_dssp CEEEEEEEETTTTEEEEEEEEHHHHHHHTHHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHH
T ss_pred ceEEEeccccCCCCceeEEEeHHHHHHHHHHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHH
Confidence 133333 334677788999999999999999999999999999987532 2234 68999999999999999999999
Q ss_pred CCCCCCCCCchhHHHHHHHHHhhHhc
Q psy7140 389 HKPPSTTLNQDEAVSRGCALQCAILS 414 (1304)
Q Consensus 389 ~~~~~~~~np~eaVa~Gaa~~aa~ls 414 (1304)
+.++....||+++||+|||++|+.++
T Consensus 302 ~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 302 GISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp SSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred CCCccccCChHHHHHHHHHHHHhChH
Confidence 98888888999999999999998654
No 20
>1jce_A ROD shape-determining protein MREB; MBL, actin, HSP-70, FTSZ, structural protein; 2.10A {Thermotoga maritima} SCOP: c.55.1.1 c.55.1.1 PDB: 1jcf_A 1jcg_A* 2wus_A
Probab=100.00 E-value=1.8e-37 Score=363.06 Aligned_cols=312 Identities=19% Similarity=0.255 Sum_probs=242.1
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCC--c-eEEcHhHHhhhhcCCCcchhhhhHhcCCCCCC
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDK--N-RILGVAAKNQTVTNVKNTIFGFKRLLGRTYDD 636 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~--~-~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~ 636 (1304)
+.+|||||||+||++++..++ . +. .+||+|+|..+ + .++|.+|.....++|.++...
T Consensus 3 ~~~igIDlGT~~s~v~~~~~~--~-~~------~~PS~v~~~~~~~~~~~vG~~A~~~~~~~~~~~~~~----------- 62 (344)
T 1jce_A 3 RKDIGIDLGTANTLVFLRGKG--I-VV------NEPSVIAIDSTTGEILKVGLEAKNMIGKTPATIKAI----------- 62 (344)
T ss_dssp -CEEEEEECSSEEEEEETTTE--E-EE------EEESCEEEETTTCCEEEESHHHHTTTTCCCTTEEEE-----------
T ss_pred CceEEEEcCcCcEEEEECCCC--E-EE------eeCcEEEEecCCCcEEEEcHHHHHhcccCCCCeEEE-----------
Confidence 358999999999999875433 2 22 38999999865 3 379999998777777665321
Q ss_pred hhHHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHH
Q psy7140 637 PFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALL 716 (1304)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~ 716 (1304)
.|++ +|.+ .....+++++++++++++.. ..++ ...+|||||++|++.||++++
T Consensus 63 ---------~p~~-----~g~i---------~~~~~~~~i~~~~l~~~~~~--~~~~--~~~~vitvP~~~~~~~r~~~~ 115 (344)
T 1jce_A 63 ---------RPMR-----DGVI---------ADYTVALVMLRYFINKAKGG--MNLF--KPRVVIGVPIGITDVERRAIL 115 (344)
T ss_dssp ---------CCEE-----TTEE---------SSHHHHHHHHHHHHHHHHTS--CCSC--CCEEEEEECTTCCHHHHHHHH
T ss_pred ---------ecCC-----CCee---------CChHHHHHHHHHHHHHHhhc--cccC--CCeEEEEECCCCCHHHHHHHH
Confidence 1211 1210 00113677777777776542 1233 378999999999999999999
Q ss_pred HHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHH
Q psy7140 717 TAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNID 796 (1304)
Q Consensus 717 ~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D 796 (1304)
+|++.||++++++++||+|||++|+... ..+..++|||+||||||+++++... . + ..++..+||++||
T Consensus 116 ~a~~~aG~~~~~li~ep~Aaa~~~~~~~-------~~~~~~lVvDiGggttdvsv~~~~~--~--~-~~~~~~lGG~~id 183 (344)
T 1jce_A 116 DAGLEAGASKVFLIEEPMAAAIGSNLNV-------EEPSGNMVVDIGGGTTEVAVISLGS--I--V-TWESIRIAGDEMD 183 (344)
T ss_dssp HHHHHTTCSEEEEEEHHHHHHHHTTCCT-------TSSSCEEEEEECSSCEEEEEEETTE--E--E-EEEEESCSHHHHH
T ss_pred HHHHHcCCCeEeccCCHHHHHHhcCCCC-------CCCceEEEEEeCCCeEEEEEEEcCC--E--E-eeCCCCccChhHH
Confidence 9999999999999999999999998642 3457899999999999999987643 2 2 3456789999999
Q ss_pred HHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCce-----eeeEE--eeecCCcceEEEecHHHHHHHH
Q psy7140 797 KILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNK-----LPLNI--ECFMDDKDVHAELKRNDLETLC 869 (1304)
Q Consensus 797 ~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~-----~~~~i--e~l~~~~d~~~~itr~efe~l~ 869 (1304)
+.|++++.+++ +.+.. ...||++|+.|+..... ..+.+ ..+.++.++.++|+|++|++++
T Consensus 184 ~~l~~~l~~~~----~~~~~---------~~~ae~~K~~l~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~~~~~~~~~ 250 (344)
T 1jce_A 184 EAIVQYVRETY----RVAIG---------ERTAERVKIEIGNVFPSKENDELETTVSGIDLSTGLPRKLTLKGGEVREAL 250 (344)
T ss_dssp HHHHHHHHHHH----CEECC---------HHHHHHHHHHHCBCSCCHHHHHCEEEEEEEETTTTEEEEEEEEHHHHHHHT
T ss_pred HHHHHHHHHHh----CcccC---------HHHHHHHHHHHhccCccccCCcceEEEeccccCCCCceeEEEeHHHHHHHH
Confidence 99999998765 22221 46799999999975421 12333 3445777788999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCC--CCce-eEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhc
Q psy7140 870 EHIFGRIEICLNKCIAESKLP--VNAI-HSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 870 ~~~~~~i~~~i~~~l~~~~~~--~~~I-~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls 943 (1304)
+++++++.+.|+++|+.++.. .+.+ +.|+|+||+|++|.|++.|++.|+.++....||+++||+||+++|+.++
T Consensus 251 ~~~~~~i~~~i~~~l~~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~~~~~v~~~~~p~~ava~Gaa~~a~~~~ 327 (344)
T 1jce_A 251 RSVVVAIVESVRTTLEKTPPELVSDIIERGIFLTGGGSLLRGLDTLLQKETGISVIRSEEPLTAVAKGAGMVLDKVN 327 (344)
T ss_dssp HHHHHHHHHHHHHHHHTSCHHHHHHHHHHCEEEESGGGCSBTHHHHHHHHHSSCEEECSSTTTHHHHHHHHGGGCHH
T ss_pred HHHHHHHHHHHHHHHHhCCchhccchhhCcEEEECccccchHHHHHHHHHHCCCccccCChHHHHHHHHHHHHhChH
Confidence 999999999999999987632 1234 6899999999999999999999998888888999999999999998654
No 21
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=99.97 E-value=1.9e-29 Score=268.60 Aligned_cols=210 Identities=14% Similarity=0.244 Sum_probs=187.8
Q ss_pred EEEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCCC
Q psy7140 952 DVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKPG 1026 (1304)
Q Consensus 952 ~~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~ 1026 (1304)
.+.|++|+++||++.+ +...+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|+|+||+
T Consensus 2 ~l~DV~p~slGie~~g----g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~Lg~f~l~gipp~ 77 (219)
T 4e81_A 2 LLLDVTPLSLGIETMG----GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDGINPA 77 (219)
T ss_dssp CCCCBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCC
T ss_pred eEEEecCcEEEEEEeC----CEEEEEEeCcCcccEeEEEEEEeCCCCCceEEEEEEEcCCcccccCCEEEEEEEeCCCCC
Confidence 4679999999999863 3456899999999999999997743 48899999987 7789999999999999999
Q ss_pred CCCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHH
Q psy7140 1027 PKGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDA 1106 (1304)
Q Consensus 1027 ~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~a 1106 (1304)
|+|.+ .|+|+|.+|.||+|+|++.+. .+++...++|... .+||++++++|++++++|..+|++.|++.++
T Consensus 78 p~G~~-~IeVtf~iD~nGiL~V~a~d~-------~tg~~~~i~I~~~--~~Ls~eeI~~m~~~a~~~~~eD~~~r~~~e~ 147 (219)
T 4e81_A 78 PRGMP-QIEVTFDIDADGILHVSAKDK-------NSGKEQKITIKAS--SGLNEDEIQKMVRDAEANAEADRKFEELVQT 147 (219)
T ss_dssp STTCS-CEEEEEEECTTCCEEEEEEET-------TTCCEEEEEECTT--CSCCHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCCc-eEEEEEEeCCCCCEeeeeecc-------ccCccceEeeecc--ccccHHHHHHHHHHHHHhhhccHHHHHHHHH
Confidence 99987 599999999999999998632 3567778888764 5799999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHHHh
Q psy7140 1107 KNALEEYVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRAME 1180 (1304)
Q Consensus 1107 kN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e 1180 (1304)
||.||+|+|++|..|.+ +.+++++++|+.|.+.|+++++||+++ ++++|++++++|++.++||..|+++
T Consensus 148 kn~le~~i~~~~~~l~~-~~~~l~~~~k~~i~~~l~~~~~~L~~~----~~~~i~~~~~~L~~~~~~i~~~~~~ 216 (219)
T 4e81_A 148 RNQGDHLLHSTRKQVEE-AGDKLPADDKTAIESALTALETALKGE----DKAAIEAKMQELAQVSQKLMEIAQQ 216 (219)
T ss_dssp HHHHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHHHSS----CHHHHHHHHHHHHHHTHHHHHHC--
T ss_pred HHHHHHHHHHHHHHHHH-hhhhCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 99999999999999974 788999999999999999999999875 6889999999999999999999876
No 22
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=99.96 E-value=5.6e-28 Score=260.55 Aligned_cols=209 Identities=12% Similarity=0.201 Sum_probs=185.2
Q ss_pred EeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCCCCC
Q psy7140 954 TDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKPGPK 1028 (1304)
Q Consensus 954 ~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~~ 1028 (1304)
.|++||+|||++.+ +...+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|+|++|.|+
T Consensus 1 ~Dv~p~slGie~~~----g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~Lg~f~l~gi~~~p~ 76 (227)
T 1u00_A 1 MDVIPLSLGLETMG----GLVEKVIPRNTTIPVARAQDFTTFKDGQTAMSIHVMQGERELVQDCRSLARFALRGIPALPA 76 (227)
T ss_dssp CCBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEEECSSTTCCCEEEEEEECSSSBGGGSEEEEEEEECCCCCCST
T ss_pred CCcccceEEEEEeC----CEEEEEEeCcCccCceEEEEEEecCCCceEEEEEEEecCCccCCCCCEEEEEEEeCCCCCCC
Confidence 48999999999852 3455799999999999999998643 48999999987 778899999999999999999
Q ss_pred CCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHHH
Q psy7140 1029 GKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAKN 1108 (1304)
Q Consensus 1029 ~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~akN 1108 (1304)
|.+ +|+|+|.+|.||+|+|++.+. .+++...++|... .+||.+++++|++++++|..+|++.+++.++||
T Consensus 77 G~~-~I~Vtf~iD~nGiL~V~a~d~-------~tg~~~~i~i~~~--~~Ls~eei~~~~~~~~~~~~~D~~~~e~~e~kn 146 (227)
T 1u00_A 77 GGA-HIRVTFQVDADGLLSVTAMEK-------STGVEASIQVKPS--YGLTDSEIASMIKDSMSYAEQDVKARMLAEQKV 146 (227)
T ss_dssp TCS-CEEEEEEECTTCCEEEEEEET-------TTCCEEEEEECCC--SCCCHHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred Cce-EEEEEEEECCCCcEEEEeecc-------cccccceEEEEec--cCCCHHHHHHHHHHHHhhhcccHHHHHHHHHHH
Confidence 998 699999999999999988632 2455667777765 579999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHHHhh
Q psy7140 1109 ALEEYVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRAMEY 1181 (1304)
Q Consensus 1109 ~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e~ 1181 (1304)
+||+|||++|++|.+ +.+++++++|+.|.+.|+++++|||++ ++++|++++++|+++++||..|++..
T Consensus 147 ~le~~i~~~~~~l~~-~~~~~~~~~k~~i~~~l~~~~~wl~~~----d~~~~~~~~~~L~~~~~~i~~r~~~~ 214 (227)
T 1u00_A 147 EAARVLESLHGALAA-DAALLSAAERQVIDDAAAHLSEVAQGD----DVDAIEQAIKNVDKQTQDFAARRMDQ 214 (227)
T ss_dssp HHHHHHHHHHHHHHH-HGGGSCHHHHHHHHHHHHHHHHHTTSS----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh-hhccCCHHHHHHHHHHHHHHHHHHhcC----CHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999975 678999999999999999999999843 48899999999999999999987643
No 23
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.93 E-value=2.2e-26 Score=267.12 Aligned_cols=229 Identities=17% Similarity=0.172 Sum_probs=171.1
Q ss_pred eCHHHHHHHHHHHHHHHHHhhhcCccceEE--EeecCCCCHHHHHHHHHHHHHc--------C------CCeEEeechhH
Q psy7140 142 FSPEQLTAMLFTKLKDISENEIQNKVHDCV--LAVPSYFTNNERKALLTAASIA--------G------LNVLRLINETT 205 (1304)
Q Consensus 142 ~~~~el~~~~L~~lk~~a~~~~~~~~~~~v--itVPa~~~~~qr~~l~~A~~~A--------G------l~~~~li~Ep~ 205 (1304)
+.+++..++++..|++.++...+.+ .++| ++||++|+..||+++++|+..+ | ++.+++++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 4446777888888887664333434 5699 9999999999999999998776 4 35688999999
Q ss_pred HHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCC
Q psy7140 206 ATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKID 285 (1304)
Q Consensus 206 AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~ 285 (1304)
|||++| +..... .+....++|||+||||||++++++.++. .+.+++++.++||++|++.|.+++. ++++..
T Consensus 174 AAa~~~-l~~~~~---~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~----~~~g~~ 244 (346)
T 2fsj_A 174 GAALYL-LNQGII---EQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIA----KETGFV 244 (346)
T ss_dssp HHHHHH-HHHTSS---CCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHH----HHHCCC
T ss_pred HHHHHh-hccccc---cccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHH----HHhCCC
Confidence 999998 332211 1234678999999999999999887776 5665567889999999999998765 445552
Q ss_pred CCCCHHHHHHHHHHHHHhhhccccCCceeeEEEeeecCCcceEEEEcHHHH-HHHHHHHHHHHHHHHHHHHHhCCCCCCc
Q psy7140 286 PRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDL-ETLCEHIFGRIEICLNKCIAESKLPVNA 364 (1304)
Q Consensus 286 ~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~~~~~~~~~~~itr~~f-e~~~~~~~~~i~~~i~~~l~~~~~~~~~ 364 (1304)
. ... ...+| . .. .+. ..+. .++++++ +++++++++++.+.++++|+++ .++
T Consensus 245 ~--~i~-----~~~~e-------~-~~--~~~----~~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~~~ 296 (346)
T 2fsj_A 245 V--PFD-----LAQEA-------L-SH--PVM----FRQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---VDR 296 (346)
T ss_dssp C--CHH-----HHHHH-------T-TS--CEE----ETTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---GGG
T ss_pred c--CCC-----HHHHh-------c-CC--eEe----ECCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---hhc
Confidence 1 100 11122 0 11 122 2233 3569999 9999999999999999999876 567
Q ss_pred ccEEEEEcCCCCchhHHHHHHHhcCCCCCC---CCCchhHHHHHHHHHhh
Q psy7140 365 IHSIEIVGGSSRIPAFKNVIESVFHKPPST---TLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 365 i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~---~~np~eaVa~Gaa~~aa 411 (1304)
++.|+|+||+|++ +++.|++.|+. ... ..||++|+|+|+..++.
T Consensus 297 i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 297 VTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp EEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred ccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 8999999999999 99999999973 333 67999999999998764
No 24
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.92 E-value=6.6e-25 Score=260.04 Aligned_cols=317 Identities=14% Similarity=0.150 Sum_probs=207.7
Q ss_pred EEEEEcCcccEEEEEEeCCceEEEeCCCCCcccceEEEEcCCceEEcHhHHHhhhhCCCcccccchhhcCCCCCChhHHH
Q psy7140 3 VIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFVQE 82 (1304)
Q Consensus 3 viGID~GTt~s~va~~~~g~~~ii~~~~g~r~~Ps~V~~~~~~~~vG~~A~~~~~~~~~~~i~~~k~~lg~~~~~~~~~~ 82 (1304)
++|||+||++++++++.+|++.+ +..|...+||.+. . .....+++.++..+|+++++.-.
T Consensus 15 ~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~-~-----------~g~i~d~~~~~~~ik~~~~~~~~------ 74 (377)
T 2ych_A 15 ALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL-M-----------EGMVAEPAALAQEIKELLLEART------ 74 (377)
T ss_dssp CEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE-E-----------TTEESCHHHHHHHHHHHHHHHTC------
T ss_pred eEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc-c-----------CCCcCCHHHHHHHHHHHHHHcCC------
Confidence 68999999999999988776555 2445566676431 1 22335667777888888864100
Q ss_pred HhhcCCccccccCCCCccccccCCCchhhhhhccCccccccCCCCceeEEEEecCCceEeCHHHHHHHHHHHHHHHHHhh
Q psy7140 83 ELKSMPFQSLKQNDGSIGFWETYDDPFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENE 162 (1304)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~el~~~~L~~lk~~a~~~ 162 (1304)
..+.... ...+..+..... .-..++++++... ++..++.+
T Consensus 75 ~~~~v~~---------------------------------~i~~~~~~~~~~---~~~~v~~~el~~~----i~~ea~~~ 114 (377)
T 2ych_A 75 RKRYVVT---------------------------------ALSNLAVILRPI---QVPKMPLKEMEEA----VRWEAERY 114 (377)
T ss_dssp CCCEEEE---------------------------------EECGGGCEEEEE---EEECCCHHHHHHH----HHHHHGGG
T ss_pred CcceEEE---------------------------------EecCCcEEEEEE---ECCCCCHHHHHHH----HHHHHhhc
Confidence 0000000 000111111110 1135788887654 34577888
Q ss_pred hcCccceEEEeecCCCCHHH--------------------HHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCC
Q psy7140 163 IQNKVHDCVLAVPSYFTNNE--------------------RKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDD 222 (1304)
Q Consensus 163 ~~~~~~~~vitVPa~~~~~q--------------------r~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~ 222 (1304)
++.++.+++|.+|. .+.+ .+++++|++.||+++..++.||+|||++|+.....
T Consensus 115 ~~~~~~~~vid~~~--~~~~~~~~~~~~~~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~~----- 187 (377)
T 2ych_A 115 IPFPIDEVVLDFAP--LTPLSEVQEGEQVQVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLAE----- 187 (377)
T ss_dssp CSSCC-CEEEEEEE--SSCGGGSCTTSEEEEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHHT-----
T ss_pred CCCChhHceEEEEE--eCCCCCCCCcceeEEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhccc-----
Confidence 99999999999983 3332 38899999999999999999999999998754321
Q ss_pred CCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q psy7140 223 QNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEK 302 (1304)
Q Consensus 223 ~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 302 (1304)
.++..++|+|+||||||+++++ .+.+.. .++.++||++||+.|++. ++.+ +.+||+
T Consensus 188 ~~~~~~~vvDiGggttdi~i~~--~g~~~~---~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~ 243 (377)
T 2ych_A 188 EPDRVFLVLDIGAESTSLVLLR--GDKPLA---VRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEE 243 (377)
T ss_dssp STTCEEEEEEECSSCEEEEEEE--TTEEEE---EEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHH
T ss_pred ccCCeEEEEEECCCcEEEEEEE--CCEEEE---EEeeechHHHHHHHHHHH--------hCCC-----------HHHHHH
Confidence 2456789999999999999976 455432 356799999999999863 3332 467899
Q ss_pred hhhccccCCceeeEEEeeecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHh--CCCCCCcccEEEEEcCCCCchhH
Q psy7140 303 LKKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAE--SKLPVNAIHSIEIVGGSSRIPAF 380 (1304)
Q Consensus 303 ~K~~Ls~~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~--~~~~~~~i~~ViLvGG~sr~p~v 380 (1304)
+|+.++..... ....+..++-......++|++|++++++.++++...+++.|+. ++.....++.|+|+||+|++|.+
T Consensus 244 ~K~~~~~~~~~-~~~~~~~i~~~~~~~~i~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l 322 (377)
T 2ych_A 244 VKRTYGMATLP-TEDEELLLDFDAERERYSPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGL 322 (377)
T ss_dssp HHHHTC--------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTH
T ss_pred HHhhccccccc-ccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhH
Confidence 99988753210 0000000111123457999999999999999999999999985 35666789999999999999999
Q ss_pred HHHHHHhcCCCCCCC--------------------CCchhHHHHHHHHHhh
Q psy7140 381 KNVIESVFHKPPSTT--------------------LNQDEAVSRGCALQCA 411 (1304)
Q Consensus 381 ~~~l~~~f~~~~~~~--------------------~np~eaVa~Gaa~~aa 411 (1304)
++.+++.|+.++... .+|..++|+|+|+++.
T Consensus 323 ~~~l~~~l~~~v~~~~P~~~v~~~~~~~~~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 323 ASLLTDTLGVNLEPVNPWEAVAVDPKRFESEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHTSEEEECCGGGGSBCCTTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHhCCCeEecCchhhcccCcccCCHHHHHhhhHHHHHHHHHHHcCC
Confidence 999999998543221 1345678889998864
No 25
>2fsj_A Hypothetical protein TA0583; actin homologs, archaea, ATPase, MREB, PARM, structural PROT; 1.90A {Thermoplasma acidophilum} SCOP: c.55.1.12 c.55.1.12 PDB: 2fsk_A 2fsn_A*
Probab=99.92 E-value=2.5e-25 Score=258.32 Aligned_cols=227 Identities=17% Similarity=0.176 Sum_probs=170.5
Q ss_pred eCHHHHHHHHHHHHHHHHHhhhccccceEE--EeecCCCCHHHHHHHHHHHHHc--------C------CceeeeechhH
Q psy7140 671 FSPEQLTAMLFTKLKDISENEIQNKVHDCV--LAVPSYFTNNERKALLTAASIA--------G------LNVLRLINETT 734 (1304)
Q Consensus 671 ~~~eel~a~~L~~l~~~a~~~~~~~~~~~V--itVP~~f~~~qr~~l~~Aa~~A--------G------l~~~~li~Ep~ 734 (1304)
+.+++..+|++..|++.++...+.+ .++| |+||++|++.||+++++|+..+ | ++.+++++||+
T Consensus 95 ~~~~~~~~ll~~~l~~~~~~~~~~~-~~vvL~i~vP~~~~~~er~a~~~~~~~~~~~v~~~~G~~~~i~v~~v~li~Ep~ 173 (346)
T 2fsj_A 95 LASKEAFPLIAAALWESGIHNDGSP-VDLVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGV 173 (346)
T ss_dssp TTSTTTHHHHHHHHHHHCCCC---C-EEEEEEEEECGGGHHHHHHHHHHHHTTEEEEEECGGGCEEEEEEEEEEEEETTH
T ss_pred ccChhHHHHHHHHHHHhhhccCCCc-eEEEEcccCCHHHHHHHHHHHHHHHcCCCcEEEeCCCceEEEEEEEEEEEccHH
Confidence 3447777888888887653333333 5799 9999999999999999997765 4 35688999999
Q ss_pred HHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCC-
Q psy7140 735 ATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKI- 813 (1304)
Q Consensus 735 Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~- 813 (1304)
|||++| +..... .+...+++|||+||||||++++++.++. .+.+.+++..+||.+|++.|.+++..++ +.
T Consensus 174 AAa~~~-l~~~~~---~~~~~~vlVvDIGgGTtDv~vi~~~~g~-~v~~~s~~~~lGg~~i~~~I~~~i~~~~----g~~ 244 (346)
T 2fsj_A 174 GAALYL-LNQGII---EQQPGYGVVIDVGSRTTDVLTINLMDME-PVVELSFSLQIGVGDAISALSRKIAKET----GFV 244 (346)
T ss_dssp HHHHHH-HHHTSS---CCCSSEEEEEEECSSCEEEEEEETTTTE-ECGGGCEEESCCHHHHHHHHHHHHHHHH----CCC
T ss_pred HHHHHh-hccccc---cccCCcEEEEECCCCcEEEEEEEecCCE-EEeecCCCcchhHHHHHHHHHHHHHHHh----CCC
Confidence 999998 332111 1234789999999999999999887766 5665567779999999999988876655 44
Q ss_pred -CCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEecHHHH-HHHHHHHHHHHHHHHHHHHHhcCCCC
Q psy7140 814 -DPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAELKRNDL-ETLCEHIFGRIEICLNKCIAESKLPV 891 (1304)
Q Consensus 814 -~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~ef-e~l~~~~~~~i~~~i~~~l~~~~~~~ 891 (1304)
++. ...+| . .. .+.+ .+. .++++++ +++++++++++.+.++++|+.+ .
T Consensus 245 ~~i~---------~~~~e-------~-~~--~~~~----~g~----~~~~~~i~~~~i~~~~~~i~~~i~~~l~~~---~ 294 (346)
T 2fsj_A 245 VPFD---------LAQEA-------L-SH--PVMF----RQK----QVGGPEVSGPILEDLANRIIENIRLNLRGE---V 294 (346)
T ss_dssp CCHH---------HHHHH-------T-TS--CEEE----TTE----EECSHHHHHHHHHHHHHHHHHHHHHHHGGG---G
T ss_pred cCCC---------HHHHh-------c-CC--eEeE----CCc----cCCHHHHHHHHHHHHHHHHHHHHHHHHHhh---h
Confidence 211 11122 1 11 1222 233 3569999 9999999999999999999876 5
Q ss_pred CceeEEEEecCCCCChhHHHHHHHHcCCCCCC---CCCchhHHHhHHHHHhh
Q psy7140 892 NAIHSIEIVGGSSRIPAFKNVIESVFHKPPST---TLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 892 ~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~---~~n~~eava~Gaa~~aa 940 (1304)
++++.|+|+||++++ +++.|++.|+. ... ..||++|+|+|+..++.
T Consensus 295 ~~i~~IvL~GGga~l--l~~~l~~~~~~-~~i~~~~~~P~~ava~G~~~~~~ 343 (346)
T 2fsj_A 295 DRVTSLIPVGGGSNL--IGDRFEEIAPG-TLVKIKPEDLQFANALGYRDAAE 343 (346)
T ss_dssp GGEEEEEEESTTHHH--HGGGGGGGSTT-CBCCCCTTTTTTHHHHHHHHHHH
T ss_pred hcccEEEEECCcHHH--HHHHHHHHCcC-cEEeccCCCcHHHHHHHHHHHHh
Confidence 678999999999999 99999999973 233 66999999999998764
No 26
>2ych_A Competence protein PILM; cell cycle, type IV pilus actin secretion; HET: ATP; 2.20A {Thermus thermophilus}
Probab=99.91 E-value=7e-25 Score=259.82 Aligned_cols=318 Identities=14% Similarity=0.152 Sum_probs=207.5
Q ss_pred eEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChhHH
Q psy7140 561 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFVQ 640 (1304)
Q Consensus 561 ~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~~~ 640 (1304)
.++|||+||+++++++..+|.+.+ +..|.+.+|+.+. ....+.++..+...+|+++++.
T Consensus 14 ~~vgiDiGt~~i~~~~~~~~~~~i--~~~g~~~~ps~~~------------~~g~i~d~~~~~~~ik~~~~~~------- 72 (377)
T 2ych_A 14 EALGLEIGASALKLVEVSGNPPAL--KALASRPTPPGLL------------MEGMVAEPAALAQEIKELLLEA------- 72 (377)
T ss_dssp CCEEEEECSSEEEEEEEETTTTEE--EEEEEEECCTTSE------------ETTEESCHHHHHHHHHHHHHHH-------
T ss_pred ceEEEEeCCCeEEEEEEeCCceEE--EEEEeEECCCCcc------------cCCCcCCHHHHHHHHHHHHHHc-------
Confidence 589999999999999887666544 2234555665421 1223456677777888888641
Q ss_pred HhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHH---------
Q psy7140 641 EELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNE--------- 711 (1304)
Q Consensus 641 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~q--------- 711 (1304)
..+ ...-.+.-+...+...... ...++++++...+ +..++.+++.++.+++|.+|. .+.+
T Consensus 73 -~~~-~~~v~~~i~~~~~~~~~~~---~~~v~~~el~~~i----~~ea~~~~~~~~~~~vid~~~--~~~~~~~~~~~~~ 141 (377)
T 2ych_A 73 -RTR-KRYVVTALSNLAVILRPIQ---VPKMPLKEMEEAV----RWEAERYIPFPIDEVVLDFAP--LTPLSEVQEGEQV 141 (377)
T ss_dssp -TCC-CCEEEEEECGGGCEEEEEE---EECCCHHHHHHHH----HHHHGGGCSSCC-CEEEEEEE--SSCGGGSCTTSEE
T ss_pred -CCC-cceEEEEecCCcEEEEEEE---CCCCCHHHHHHHH----HHHHhhcCCCChhHceEEEEE--eCCCCCCCCccee
Confidence 000 0000111122222111111 1457888877643 446777888899999999983 3332
Q ss_pred -----------HHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEE
Q psy7140 712 -----------RKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLK 780 (1304)
Q Consensus 712 -----------r~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~ 780 (1304)
.+++++|++.||+++..++.||+|||++|+.... ...+..++|+|+||||||+++++ .+.+.
T Consensus 142 ~v~~va~~~~~v~~~~~~~~~aGl~~~~i~~ep~Aaa~~~~~~~~-----~~~~~~~~vvDiGggttdi~i~~--~g~~~ 214 (377)
T 2ych_A 142 QVMVAAARQEAVAGVLEALRGAGLVPVVLDVKPFAGLYPLEARLA-----EEPDRVFLVLDIGAESTSLVLLR--GDKPL 214 (377)
T ss_dssp EEEEEEEEHHHHHHHHHHHHHTTCEEEEEEEHHHHTTGGGHHHHH-----TSTTCEEEEEEECSSCEEEEEEE--TTEEE
T ss_pred EEEEEEecHHHHHHHHHHHHHCCCceEEEecchHHHHHHHHhhcc-----cccCCeEEEEEECCCcEEEEEEE--CCEEE
Confidence 3889999999999999999999999999875331 13456899999999999999986 44432
Q ss_pred EEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEEEe
Q psy7140 781 VLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHAEL 860 (1304)
Q Consensus 781 v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~~i 860 (1304)
..++..+||.+||+.|++. ++.+ +.+||++|+.++..... ....+..++-.+....+
T Consensus 215 ---~~~~~~~GG~~i~~~i~~~--------~~~~-----------~~~aE~~K~~~~~~~~~-~~~~~~~i~~~~~~~~i 271 (377)
T 2ych_A 215 ---AVRVLTLSGKDFTEAIARS--------FNLD-----------LLAAEEVKRTYGMATLP-TEDEELLLDFDAERERY 271 (377)
T ss_dssp ---EEEEESCSHHHHHHHHHHH--------TTCC-----------HHHHHHHHHHTC-----------------------
T ss_pred ---EEEeeechHHHHHHHHHHH--------hCCC-----------HHHHHHHHhhccccccc-ccccccccccccccccC
Confidence 3456789999999999873 2322 46799999999853211 00000111111234579
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHh--cCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCC--------------
Q psy7140 861 KRNDLETLCEHIFGRIEICLNKCIAE--SKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTT-------------- 924 (1304)
Q Consensus 861 tr~efe~l~~~~~~~i~~~i~~~l~~--~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~-------------- 924 (1304)
+|++|++++++.++++...|++.|+. ++.....++.|+|+||+|++|.+++.+++.||.++...
T Consensus 272 ~~~~~~~~i~~~~~~i~~~i~~~l~~~~~~~~~~~~~~IvL~GG~s~~p~l~~~l~~~l~~~v~~~~P~~~v~~~~~~~~ 351 (377)
T 2ych_A 272 SPGRIYDAIRPVLVELTQELRRSLEFFRIQLEEASPEVGYLLGGGSKLRGLASLLTDTLGVNLEPVNPWEAVAVDPKRFE 351 (377)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHC---CCSEEEEESGGGGSTTHHHHHHHHHTSEEEECCGGGGSBCCTTTSC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCCCcCEEEEECccccchhHHHHHHHHhCCCeEecCchhhcccCcccCC
Confidence 99999999999999999999999985 35556679999999999999999999999998654322
Q ss_pred ------CCchhHHHhHHHHHhh
Q psy7140 925 ------LNQDEAVSRGCALQCA 940 (1304)
Q Consensus 925 ------~n~~eava~Gaa~~aa 940 (1304)
.+|..++|.|+|+++.
T Consensus 352 ~~~l~~~~p~~a~a~Glal~~~ 373 (377)
T 2ych_A 352 SEQLQEIGPEFAVALGLALRGV 373 (377)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHhhhHHHHHHHHHHHcCC
Confidence 1345567888888764
No 27
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=2.5e-23 Score=234.70 Aligned_cols=203 Identities=21% Similarity=0.307 Sum_probs=174.0
Q ss_pred HHHHHHHHHHHHHHHHhhhcCccceEEEeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCC
Q psy7140 145 EQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQN 224 (1304)
Q Consensus 145 ~el~~~~L~~lk~~a~~~~~~~~~~~vitVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~ 224 (1304)
.+....+|+++++.++...+.....+++++|++|...+|++++++++.+|+++..++.||+|++++|+..
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------- 139 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------- 139 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------
Confidence 3456788899999998888888899999999999999999999999999999999999999999988641
Q ss_pred CcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Q psy7140 225 PRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLK 304 (1304)
Q Consensus 225 ~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 304 (1304)
..+|+|+|||||+++++. ++.+. ......+||.+||+.|.+++. .+ ...|+++|
T Consensus 140 --~~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k 193 (272)
T 3h1q_A 140 --DGIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIK 193 (272)
T ss_dssp --SEEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHH
T ss_pred --CEEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHH
Confidence 148999999999999965 45443 346789999999999998762 11 35788999
Q ss_pred hccccCCceeeEEEeeecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHH
Q psy7140 305 KQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVI 384 (1304)
Q Consensus 305 ~~Ls~~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l 384 (1304)
+.++ +++++++++.++++++...+.+.++..+ +++.|+|+||+|++|.+++.|
T Consensus 194 ~~~~-----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l 246 (272)
T 3h1q_A 194 KDFS-----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEF 246 (272)
T ss_dssp HSST-----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHH
T ss_pred HhcC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHH
Confidence 8875 5899999999999999999999998764 478999999999999999999
Q ss_pred HHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 385 ESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 385 ~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
++.|+.++..+.||++++|+|||++|
T Consensus 247 ~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 247 SRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHhCCCccccCChHHHHHHHHHhcC
Confidence 99999999889999999999999875
No 28
>3h1q_A Ethanolamine utilization protein EUTJ; ethanolamine utilization EUTJ, structural genomics, PSI-2; HET: ATP; 2.80A {Carboxydothermus hydrogenoformans z-29organism_taxid}
Probab=99.91 E-value=5.7e-23 Score=231.79 Aligned_cols=203 Identities=21% Similarity=0.307 Sum_probs=173.8
Q ss_pred HHHHHHHHHHHHHHHHhhhccccceEEEeecCCCCHHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCC
Q psy7140 674 EQLTAMLFTKLKDISENEIQNKVHDCVLAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQN 753 (1304)
Q Consensus 674 eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~f~~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~ 753 (1304)
-+....+|+++++.++...+.....+++|+|++|+..+|+.+.++++.+|+++..++.||+|++++|+..
T Consensus 70 ~~~~~~~l~~~~~~~~~~~~~~~~~~v~tvp~~~~~~~~~~~~~~~~~~g~~~~~i~~e~~A~a~~~~~~---------- 139 (272)
T 3h1q_A 70 YIGAIQIVRELKAKVERLLGSELFQAATAIPPGTVGRNAEACGHVVAGAGLELVTLVDEPVAAARALGIN---------- 139 (272)
T ss_dssp HHHHHHHHHHHHHHHHHHSSSCCCEEEEECCSCC---CTTHHHHHHHHTTCEEEEEECHHHHHHHHHTCS----------
T ss_pred HHHHHHHHHHHHHHHHHhcCCccCeEEEEcCCCCCHHHHHHHHHHHHHcCCeeeecccHHHHHHHHHcCC----------
Confidence 3455788888888888887888889999999999999999999999999999999999999999998641
Q ss_pred CcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHH
Q psy7140 754 PRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLK 833 (1304)
Q Consensus 754 ~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K 833 (1304)
..+|+|+|||||+++++. .+.+. ......+||.+||+.|.+++. .+ ...|+++|
T Consensus 140 --~~~viDiGggst~~~~~~--~g~~~---~~~~~~~Gg~~~~~~l~~~l~--------~~-----------~~~ae~~k 193 (272)
T 3h1q_A 140 --DGIVVDIGGGTTGIAVIE--KGKIT---ATFDEPTGGTHLSLVLAGSYK--------IP-----------FEEAETIK 193 (272)
T ss_dssp --SEEEEEECSSCEEEEEEE--TTEEE---EECCBSCCHHHHHHHHHHHHT--------CC-----------HHHHHHHH
T ss_pred --CEEEEEECCCcEEEEEEE--CCEEE---EEecCCCcHHHHHHHHHHHhC--------CC-----------HHHHHHHH
Confidence 259999999999999976 44432 346779999999999998873 11 35789999
Q ss_pred HHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHH
Q psy7140 834 KQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVI 913 (1304)
Q Consensus 834 ~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l 913 (1304)
+.++ ++++|++++.++++++...+.+.++..+ +++.|+|+||++++|.+++.|
T Consensus 194 ~~~~-----------------------~~~~~~~~~~~~~~~i~~~i~~~l~~~~----~~~~ivL~GG~a~~~~l~~~l 246 (272)
T 3h1q_A 194 KDFS-----------------------RHREIMRVVRPVIEKMALIVKEVIKNYD----QTLPVYVVGGTAYLTGFSEEF 246 (272)
T ss_dssp HSST-----------------------THHHHHHHHHHHHHHHHHHHHHHTTTSC----SSCCEEEESGGGGSTTHHHHH
T ss_pred HhcC-----------------------CHHHHHHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCccchhhHHHHH
Confidence 8876 5899999999999999999999998764 467999999999999999999
Q ss_pred HHHcCCCCCCCCCchhHHHhHHHHHh
Q psy7140 914 ESVFHKPPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 914 ~~~fg~~~~~~~n~~eava~Gaa~~a 939 (1304)
++.|+.++..+.||++++|+|||++|
T Consensus 247 ~~~l~~~v~~~~~p~~a~a~Gaal~a 272 (272)
T 3h1q_A 247 SRFLGKEVQVPIHPLLVTPLGIALFG 272 (272)
T ss_dssp HHHHSSCCBCCSSGGGHHHHHHHTTC
T ss_pred HHHhCCCccccCChHHHHHHHHHhcC
Confidence 99999999999999999999999875
No 29
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.90 E-value=2.6e-23 Score=249.44 Aligned_cols=228 Identities=16% Similarity=0.146 Sum_probs=163.4
Q ss_pred cceEEEeecCCCCHHHHHHHHHHH-HHcCCCeEEeechhHHHHHH-hhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEE
Q psy7140 167 VHDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALA-YGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAA 244 (1304)
Q Consensus 167 ~~~~vitVPa~~~~~qr~~l~~A~-~~AGl~~~~li~Ep~AAal~-y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 244 (1304)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ...+. ... ..||||+||||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~--~~~-~glVvDiG~gtt~v~~v~ 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGE--RTL-TGTVIDSGDGVTHVIPVA 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCS--CCC-CEEEEEESSSCEEEEEEE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCC--CCC-eEEEEEcCCCceEEEEeE
Confidence 357999999999999999999999 88999999999999999987 421 11111 112 469999999999999974
Q ss_pred EECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCc------------
Q psy7140 245 FVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSN------------ 312 (1304)
Q Consensus 245 ~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~------------ 312 (1304)
+|. .+....++.++||++||+.|.+++.+++ +...... -...+|++|+.++....
T Consensus 182 --~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~ 248 (418)
T 1k8k_A 182 --EGY-VIGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTD 248 (418)
T ss_dssp --TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHS
T ss_pred --CCE-EcccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccc
Confidence 554 2333335679999999999999986432 1221111 12456777777653211
Q ss_pred ----eeeEEEeeecCCcceEEEEcHHHH---HHHHHHH------HHHHHHHHHHHHHhCC--CCCCcccEEEEEcCCCCc
Q psy7140 313 ----KLPLNIECFMDDKDVHAELKRNDL---ETLCEHI------FGRIEICLNKCIAESK--LPVNAIHSIEIVGGSSRI 377 (1304)
Q Consensus 313 ----~~~~~i~~~~~~~~~~~~itr~~f---e~~~~~~------~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~sr~ 377 (1304)
...+.++....+....+++++++| |.++.|. +..|.++|.++|.... +....++.|+|+||+|++
T Consensus 249 ~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~ 328 (418)
T 1k8k_A 249 GSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMF 328 (418)
T ss_dssp GGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCS
T ss_pred ccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccc
Confidence 123455544455667899999999 4444443 2568889999998754 445567899999999999
Q ss_pred hhHHHHHHHhcCCC------------------------CCCCCCchhHHHHHHHHHhhH
Q psy7140 378 PAFKNVIESVFHKP------------------------PSTTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 378 p~v~~~l~~~f~~~------------------------~~~~~np~eaVa~Gaa~~aa~ 412 (1304)
|.+++.|++.++.. +..+.+|..++.+||+++|..
T Consensus 329 pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 387 (418)
T 1k8k_A 329 RDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAST 387 (418)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTTS
T ss_pred ccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHcC
Confidence 99999988766421 122347789999999999873
No 30
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.89 E-value=2.1e-22 Score=238.39 Aligned_cols=199 Identities=15% Similarity=0.154 Sum_probs=156.1
Q ss_pred HHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCC
Q psy7140 181 NERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSE 260 (1304)
Q Consensus 181 ~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~ 260 (1304)
...+.+.+|++.|||++..++.||+|||++|.... .+...++|||+||||||+++++ +|.+... ++.+
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-------~~~~gv~vvDiGggttdisi~~--~g~~~~~---~~i~ 235 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-------EKDRGVVVVNLGYNFTGLIAYK--NGVPIKI---SYVP 235 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-------HHHHCEEEEEECSSSEEEEEEE--TTEEEEE---EEES
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-------cccCCEEEEEECCCcEEEEEEE--CCEEEEE---Eecc
Confidence 34678999999999999999999999999986432 1335689999999999999965 6766543 4569
Q ss_pred cccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCC----ceeeEEEeeecCCcceEEEEcHHHH
Q psy7140 261 IGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANS----NKLPLNIECFMDDKDVHAELKRNDL 336 (1304)
Q Consensus 261 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~----~~~~~~i~~~~~~~~~~~~itr~~f 336 (1304)
+||++||+.|+..+. . ...+||++|+.++... ....+.++.. +.....+++|++|
T Consensus 236 ~GG~~it~dIa~~l~--------~-----------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~--~~~~~~~is~~~l 294 (419)
T 4a2a_A 236 VGMKHVIKDVSAVLD--------T-----------SFEESERLIITHGNAVYNDLKEEEIQYRGL--DGNTIKTTTAKKL 294 (419)
T ss_dssp CCHHHHHHHHHHHHT--------C-----------CHHHHHHHHHHHCCSCCTTCCCCEEEEECT--TSCSEEEEEHHHH
T ss_pred cHHHHHHHHHHHHHC--------C-----------CHHHHHHHHHHhccCcccCCCCceEEEeec--CCccceEEcHHHH
Confidence 999999999997641 1 2478999999887421 1234555543 3346789999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhCCC------CCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCC---------------
Q psy7140 337 ETLCEHIFGRIEICLNKCIAESKL------PVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTT--------------- 395 (1304)
Q Consensus 337 e~~~~~~~~~i~~~i~~~l~~~~~------~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~--------------- 395 (1304)
.++++|.++++.+.+++.|++++. ....++.|+|+||+|++|.+++.+++.||.++...
T Consensus 295 ~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~ 374 (419)
T 4a2a_A 295 SVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADE 374 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccc
Confidence 999999999999999999999987 34568999999999999999999999998654211
Q ss_pred --CCchhHHHHHHHHHhhH
Q psy7140 396 --LNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 396 --~np~eaVa~Gaa~~aa~ 412 (1304)
-+|..+.|.|++++++.
T Consensus 375 ~~~~P~~~t~~Gl~~~~~~ 393 (419)
T 4a2a_A 375 VANDPSFAAAFGNVFAVSE 393 (419)
T ss_dssp HHTCGGGHHHHHTTCC---
T ss_pred ccCCchHHHHHHHHHHHhh
Confidence 48999999999998864
No 31
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.89 E-value=5.8e-23 Score=242.16 Aligned_cols=214 Identities=11% Similarity=0.151 Sum_probs=151.5
Q ss_pred ceEEEeecCCCCHHHHHHHHHHH-HHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEE
Q psy7140 168 HDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 246 (1304)
Q Consensus 168 ~~~vitVPa~~~~~qr~~l~~A~-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~ 246 (1304)
..++||+|++++..+|+++.+++ +.+|++.+.+++||+|||++|+. ...||||+||||||++. +.
T Consensus 101 ~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~~~~e~~aaa~a~g~------------~~~lVvDiG~gtt~v~~--v~ 166 (375)
T 2fxu_A 101 HPTLLTEAPLNPKANREKMTQIMFETFNVPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVTHNVP--IY 166 (375)
T ss_dssp SCEEEEECTTCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHTTC------------SSEEEEEECSSCEEEEE--EE
T ss_pred CcEEEEeCCCCcHHHHHHHHHHHHHhcCcceEEEccchheeeeecCC------------CeEEEEEcCCCceEEeE--eE
Confidence 45999999999999999888765 77899999999999999999873 13689999999999876 45
Q ss_pred CCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCC---------------
Q psy7140 247 KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANS--------------- 311 (1304)
Q Consensus 247 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~--------------- 311 (1304)
+|. .+....+..++||++||+.|.+++..+ .+....... ...+|++|+.++...
T Consensus 167 ~G~-~~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~ 235 (375)
T 2fxu_A 167 EGY-ALPHAIMRLDLAGRDLTDYLMKILTER---GYSFVTTAE-------REIVRDIKEKLCYVALDFENEMATAASSSS 235 (375)
T ss_dssp TTE-ECGGGCEEESCCHHHHHHHHHHHHHHH---TCCCCSHHH-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCST
T ss_pred CCE-EeccceEEeccCHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHHHHhhcccHHHHHHhhcccCc
Confidence 663 333334567999999999999998653 122211111 233455555443211
Q ss_pred ceeeEEEeeecCCcceEEEEcHHHHH---HHHHHH-----HHHHHHHHHHHHHhCC--CCCCcccEEEEEcCCCCchhHH
Q psy7140 312 NKLPLNIECFMDDKDVHAELKRNDLE---TLCEHI-----FGRIEICLNKCIAESK--LPVNAIHSIEIVGGSSRIPAFK 381 (1304)
Q Consensus 312 ~~~~~~i~~~~~~~~~~~~itr~~fe---~~~~~~-----~~~i~~~i~~~l~~~~--~~~~~i~~ViLvGG~sr~p~v~ 381 (1304)
....+.++ ++ ..++++++.|+ .+++|. ...+.++|.++|.... +....++.|+|+||+|++|.++
T Consensus 236 ~~~~~~lp---dg--~~i~i~~erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~ 310 (375)
T 2fxu_A 236 LEKSYELP---DG--QVITIGNERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIA 310 (375)
T ss_dssp TCEEEECT---TS--CEEEESTHHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHH
T ss_pred cCeEEECC---CC--CEEEEChhheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHH
Confidence 01112221 22 35778888884 333332 2458888888888653 2233468899999999999999
Q ss_pred HHHHHhcC--------CCCCCCCCchhHHHHHHHHHhh
Q psy7140 382 NVIESVFH--------KPPSTTLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 382 ~~l~~~f~--------~~~~~~~np~eaVa~Gaa~~aa 411 (1304)
+.|++.++ .++....+|..++++||+++|.
T Consensus 311 ~rl~~el~~~~p~~~~v~v~~~~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 311 DRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILAS 348 (375)
T ss_dssp HHHHHHHHHHSCTTCCCCEECCTTTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCCCeeEEEEcCCCCCccEEcchHHhhC
Confidence 99998875 1233567999999999999997
No 32
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=99.89 E-value=4.8e-23 Score=211.42 Aligned_cols=160 Identities=18% Similarity=0.293 Sum_probs=136.9
Q ss_pred ceeEEEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecC
Q psy7140 949 RHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDI 1023 (1304)
Q Consensus 949 ~~~~~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i 1023 (1304)
..+.+.|++|++|||+|.+ +...+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|+|+
T Consensus 18 ~~f~l~DV~P~slGie~~g----g~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v~I~VyqGE~~~~~dn~~LG~f~l~gi 93 (182)
T 3n8e_A 18 LYFQSMDVTPLSLGIETLG----GVFTKLINRNTTIPTKKSQVFSTAADGQTQVEIKVCQGEREMAGDNKLLGQFTLIGI 93 (182)
T ss_dssp ------CBCSSCEEEECTT----SBEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCC
T ss_pred CCEEEEEecCCEEEEEEeC----CEEEEEEeCCCccCEEEEEEEEECCCCccEEEEEEEEcCccccccCceEEEEEEcCC
Confidence 4688999999999999852 3455799999999999999997754 38899999987 7789999999999999
Q ss_pred CCCCCCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHH
Q psy7140 1024 KPGPKGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDR 1103 (1304)
Q Consensus 1024 ~~~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~ 1103 (1304)
||+|+|.+ +|+|+|++|.||+|+|++.+. .+++...++|... ..||++++++|++++++|+++|++.+++
T Consensus 94 pp~p~G~~-~IeVtf~iD~nGiL~VsA~d~-------~tg~~~~i~I~~~--~~Ls~eei~~mi~~a~~~~~eD~~~~~~ 163 (182)
T 3n8e_A 94 PPAPRGVP-QIEVTFDIDANGIVHVSAKDK-------GTGREQQIVIQSS--GGLSKDDIENMVKNAEKYAEEDRRKKER 163 (182)
T ss_dssp CCCCTTCS-CEEEEEEECTTCCEEEEEEET-------TTCCEEEEEESCC--CCCCHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCCCCCe-eEEEEEEEecCCEEEEEEEEc-------CCCCEeeEEEecC--ccCCHHHHHHHHHHHHHHHHhHHHHHHH
Confidence 99999987 599999999999999998632 3567777888775 7999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhc
Q psy7140 1104 VDAKNALEEYVYELRDGLA 1122 (1304)
Q Consensus 1104 ~~akN~LEs~iy~~r~~L~ 1122 (1304)
.++||+||+|+|++|++|+
T Consensus 164 ~e~kn~le~~iy~~~~~l~ 182 (182)
T 3n8e_A 164 VEAVNMAEGIIHDTETKME 182 (182)
T ss_dssp HHHHHHHHHHHHCCSCCCC
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 9999999999999998763
No 33
>1k8k_A ARP3, actin-like protein 3, actin-2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 c.55.1.1 PDB: 1tyq_A* 1u2v_A* 2p9i_A* 2p9k_A* 2p9l_A 2p9n_A* 2p9p_A* 2p9s_A* 2p9u_A* 3dxk_A* 3dxm_A* 3rse_A
Probab=99.88 E-value=3.2e-22 Score=239.89 Aligned_cols=227 Identities=16% Similarity=0.147 Sum_probs=163.9
Q ss_pred cceEEEeecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHH-hccccCCCCCCCCCCcEEEEEEeCCceeEEEEEE
Q psy7140 696 VHDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALA-YGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAA 773 (1304)
Q Consensus 696 ~~~~VitVP~~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~-y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 773 (1304)
...+|||+|++|+..+|+++.+++ +.+|++.+.+++||+||+++ |.. ..++. ... ..+|||+|+||||++++.
T Consensus 107 ~~~vvit~p~~~~~~~r~~~~e~~fe~~g~~~~~l~~ep~aa~~a~~~~--~~~~~--~~~-~glVvDiG~gtt~v~~v~ 181 (418)
T 1k8k_A 107 DHYFLLTEPPLNTPENREYTAEIMFESFNVPGLYIAVQAVLALAASWTS--RQVGE--RTL-TGTVIDSGDGVTHVIPVA 181 (418)
T ss_dssp GCCEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHGGGS--TTCCS--CCC-CEEEEEESSSCEEEEEEE
T ss_pred CCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCEEEEechHHHHhhhhhcc--cccCC--CCC-eEEEEEcCCCceEEEEeE
Confidence 457999999999999999999999 88999999999999999987 421 11111 122 679999999999999985
Q ss_pred EECCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCc------------
Q psy7140 774 FVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSN------------ 841 (1304)
Q Consensus 774 ~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~------------ 841 (1304)
.|. .+.....+.++||++||+.|.+++..++ +..+... -...+|++|+.++....
T Consensus 182 --~G~-~~~~~~~~~~lGG~~lt~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~ 248 (418)
T 1k8k_A 182 --EGY-VIGSCIKHIPIAGRDITYFIQQLLRDRE---VGIPPEQ-------SLETAKAVKERYSYVCPDLVKEFNKYDTD 248 (418)
T ss_dssp --TTE-ECGGGCEEESCSHHHHHHHHHHHHHTTC---CCCCGGG-------HHHHHHHHHHHHCCCCSCHHHHHHHHHHS
T ss_pred --CCE-EcccceEEEeCcHHHHHHHHHHHHHhcC---CCCCCHH-------HHHHHHHHHHhhchhcccHHHHHHhhccc
Confidence 443 2333335678999999999999997653 1121111 13567888888864221
Q ss_pred ----eeeeEEeeecCCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHhcC--CCCCceeEEEEecCCCCC
Q psy7140 842 ----KLPLNIECFMDDKDVHAELKRNDL---ETLCEHI------FGRIEICLNKCIAESK--LPVNAIHSIEIVGGSSRI 906 (1304)
Q Consensus 842 ----~~~~~ie~l~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~~~--~~~~~I~~V~LvGG~sri 906 (1304)
...+.++....+....+++++++| |.++.|. +..+.+.|.++|..+. +....++.|+|+||+|++
T Consensus 249 ~~~~~~~~~lpd~~~~~~~~i~l~~erf~~~E~lF~P~~~~~~~~~~i~~~i~~si~~~~~~~~~~l~~~IvL~GG~s~~ 328 (418)
T 1k8k_A 249 GSKWIKQYTGINAISKKEFSIDVGYERFLGPEIFFHPEFANPDFTQPISEVVDEVIQNCPIDVRRPLYKNIVLSGGSTMF 328 (418)
T ss_dssp GGGTCEEEEEECTTTCCEEEEEECTHHHHHHHTTTCGGGTCTTCCCCHHHHHHHHHHHSCGGGTTHHHHCEEEESGGGCS
T ss_pred ccccceeEECCCCCCCcccEEEeChHHhhCcHhhCCCccCCCCCCCCHHHHHHHHHHcCCHHHHHHHHhceEEeCCcccc
Confidence 012344433344566889999999 4454443 2568888999998765 334567899999999999
Q ss_pred hhHHHHHHHHcCCC------------------------CCCCCCchhHHHhHHHHHhh
Q psy7140 907 PAFKNVIESVFHKP------------------------PSTTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 907 p~v~~~l~~~fg~~------------------------~~~~~n~~eava~Gaa~~aa 940 (1304)
|.+++.|++.++.. +..+.++..++..||+++|.
T Consensus 329 pg~~~rl~~el~~~~~~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 386 (418)
T 1k8k_A 329 RDFGRRLQRDLKRTVDARLKLSEELSGGRLKPKPIDVQVITHHMQRYAVWFGGSMLAS 386 (418)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHC----CCCCCCCCEECCTTCTTHHHHHHHHHTT
T ss_pred ccHHHHHHHHHHHhhccccccccccccccCCCCceeEEEeCCCccccceeHhHHHHHc
Confidence 99999998766321 12244778999999999986
No 34
>4a2a_A Cell division protein FTSA, putative; cell cycle, actin, divisome; HET: ATP; 1.80A {Thermotoga maritima} PDB: 1e4g_T* 1e4f_T* 4a2b_A*
Probab=99.87 E-value=1.3e-21 Score=231.60 Aligned_cols=200 Identities=14% Similarity=0.136 Sum_probs=156.9
Q ss_pred HHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCC
Q psy7140 710 NERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSE 789 (1304)
Q Consensus 710 ~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~ 789 (1304)
...+.+.+|++.|||++..++.||.|||++|.... .++..+++||+||||||+++++ ++.+.. .++.+
T Consensus 168 ~~v~n~~~~~~~AGL~v~~lv~ep~Aaa~a~l~~~-------~~~~gv~vvDiGggttdisi~~--~g~~~~---~~~i~ 235 (419)
T 4a2a_A 168 KVYEMFYNFLQDTVKSPFQLKSSLVSTAEGVLTTP-------EKDRGVVVVNLGYNFTGLIAYK--NGVPIK---ISYVP 235 (419)
T ss_dssp HHHHHHHHHHHTTSCSCEEEEEHHHHHHHHHCCHH-------HHHHCEEEEEECSSSEEEEEEE--TTEEEE---EEEES
T ss_pred HHHHHHHHHHHHcCCcEEEEEEHHHHHHHHhhccc-------cccCCEEEEEECCCcEEEEEEE--CCEEEE---EEecc
Confidence 34678999999999999999999999999985422 2345799999999999999976 565543 34569
Q ss_pred CCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccC----CceeeeEEeeecCCcceEEEecHHHH
Q psy7140 790 IGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSAN----SNKLPLNIECFMDDKDVHAELKRNDL 865 (1304)
Q Consensus 790 lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~----~~~~~~~ie~l~~~~d~~~~itr~ef 865 (1304)
+||++||+.|+..+.- ...+||++|+.++.. .....+.++... .+....++|++|
T Consensus 236 ~GG~~it~dIa~~l~~-------------------~~~~AE~iK~~~g~a~~~~~~~~~i~v~~~~--~~~~~~is~~~l 294 (419)
T 4a2a_A 236 VGMKHVIKDVSAVLDT-------------------SFEESERLIITHGNAVYNDLKEEEIQYRGLD--GNTIKTTTAKKL 294 (419)
T ss_dssp CCHHHHHHHHHHHHTC-------------------CHHHHHHHHHHHCCSCCTTCCCCEEEEECTT--SCSEEEEEHHHH
T ss_pred cHHHHHHHHHHHHHCC-------------------CHHHHHHHHHHhccCcccCCCCceEEEeecC--CccceEEcHHHH
Confidence 9999999999876522 247899999999742 112345555443 346779999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCC------CCceeEEEEecCCCCChhHHHHHHHHcCCCCC--C-----C--------
Q psy7140 866 ETLCEHIFGRIEICLNKCIAESKLP------VNAIHSIEIVGGSSRIPAFKNVIESVFHKPPS--T-----T-------- 924 (1304)
Q Consensus 866 e~l~~~~~~~i~~~i~~~l~~~~~~------~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~--~-----~-------- 924 (1304)
++++++.++++...+++.|+.++.+ ...++.|+|+||+|++|.+++.+++.||.++. . +
T Consensus 295 ~~ii~p~veei~~~V~~~L~~~~~~~p~~~~~~~~~~IvLtGG~s~lpgl~e~~~~~~g~~vri~~~~~~~p~~~~~~~~ 374 (419)
T 4a2a_A 295 SVIIHARLREIMSKSKKFFREVEAKIVEEGEIGIPGGVVLTGGGAKIPRINELATEVFKSPVRTGCYANSDRPSIINADE 374 (419)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTCC--------TTCEEEESGGGGSTTHHHHHHHHHTSCEEECCGGGSSSCCCBTCHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHcCCCcccccccccCCEEEEECchhchhhHHHHHHHHHCCCeEEEecCCCCchhccCccc
Confidence 9999999999999999999999873 45689999999999999999999999987642 2 1
Q ss_pred --CCchhHHHhHHHHHhhHh
Q psy7140 925 --LNQDEAVSRGCALQCAIL 942 (1304)
Q Consensus 925 --~n~~eava~Gaa~~aa~l 942 (1304)
.+|..+.+.|.+++++..
T Consensus 375 ~~~~P~~~t~~Gl~~~~~~~ 394 (419)
T 4a2a_A 375 VANDPSFAAAFGNVFAVSEN 394 (419)
T ss_dssp HHTCGGGHHHHHTTCC----
T ss_pred ccCCchHHHHHHHHHHHhhc
Confidence 489999999999988643
No 35
>2fxu_A Alpha-actin-1, actin, alpha skeletal muscle; actin complexed to bistramide A, structural protein; HET: HIC ATP BID; 1.35A {Oryctolagus cuniculus} SCOP: c.55.1.1 c.55.1.1 PDB: 1h1v_A* 1kxp_A* 1lot_B* 1m8q_7* 1ma9_B* 1mvw_1* 1nwk_A* 1o18_1* 1o19_1* 1o1a_1* 1o1b_0* 1o1c_0* 1o1d_0* 1o1e_1* 1o1f_0* 1o1g_1* 1j6z_A* 1qz6_A* 1rdw_X* 1rfq_A* ...
Probab=99.86 E-value=1.3e-21 Score=230.66 Aligned_cols=307 Identities=13% Similarity=0.144 Sum_probs=192.3
Q ss_pred eEEEEEccCccEEEEEEECCceE-EEeCCCCCcccce-EEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChh
Q psy7140 561 SVIGIDFGTESCYLSVAKSGGIE-TIVNDYSLRSTPS-CVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPF 638 (1304)
Q Consensus 561 ~vvGID~Gtt~s~va~~~~g~~~-ii~n~~~~r~~Ps-~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~ 638 (1304)
..|+||+||.++++++...+.+. ++++-.+..+.++ .+.+..+..++|.+|.... . ...++
T Consensus 6 ~~ivID~Gs~~~k~G~~~~~~p~~~~ps~v~~~~~~~~~~~~~~~~~~vG~~a~~~~----~--~~~~~----------- 68 (375)
T 2fxu_A 6 TALVCDNGSGLVKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQSKR----G--ILTLK----------- 68 (375)
T ss_dssp CCEEEEECSSEEEEEETTCSSCSEEEECCEEEECTTTC-------CCEEHHHHHHHT----T--SEEEE-----------
T ss_pred ceEEEECCCCeEEEEECCCCCCceeeccccccccccccccCCCCCCeEechhHhhcC----c--cccee-----------
Confidence 57999999999999987655432 3433333322222 1223334567888887531 0 01111
Q ss_pred HHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhcc--ccceEEEeecCCCCHHHHHHHH
Q psy7140 639 VQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQN--KVHDCVLAVPSYFTNNERKALL 716 (1304)
Q Consensus 639 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~--~~~~~VitVP~~f~~~qr~~l~ 716 (1304)
.|. .+|.+ ... +....+++++.. +.++. ....++||+|++++..+|+++.
T Consensus 69 -------~Pi-----~~G~i------------~d~-d~~e~i~~~~~~---~~L~~~~~~~~vvit~p~~~~~~~r~~~~ 120 (375)
T 2fxu_A 69 -------YPI-----EHGII------------TNW-DDMEKIWHHTFY---NELRVAPEEHPTLLTEAPLNPKANREKMT 120 (375)
T ss_dssp -------CSE-----ETTEE------------CCH-HHHHHHHHHHHH---TTSCCCGGGSCEEEEECTTCCHHHHHHHH
T ss_pred -------ccc-----cCCcc------------cCH-HHHHHHHHHHHH---HhcCCCCcCCcEEEEeCCCCcHHHHHHHH
Confidence 111 01111 111 122333443331 22332 2346999999999999999888
Q ss_pred HHH-HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHH
Q psy7140 717 TAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNI 795 (1304)
Q Consensus 717 ~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~ 795 (1304)
+++ +.+|++.+.+++||+|||++|+. ...+|||+|+|||+++.+ .+|. .+.......++||+++
T Consensus 121 e~~fe~~g~~~~~~~~e~~aaa~a~g~------------~~~lVvDiG~gtt~v~~v--~~G~-~~~~~~~~~~~GG~~l 185 (375)
T 2fxu_A 121 QIMFETFNVPAMYVAIQAVLSLYASGR------------TTGIVLDSGDGVTHNVPI--YEGY-ALPHAIMRLDLAGRDL 185 (375)
T ss_dssp HHHHHTTCCSEEEEEEHHHHHHHHTTC------------SSEEEEEECSSCEEEEEE--ETTE-ECGGGCEEESCCHHHH
T ss_pred HHHHHhcCcceEEEccchheeeeecCC------------CeEEEEEcCCCceEEeEe--ECCE-EeccceEEeccCHHHH
Confidence 764 88899999999999999999874 248999999999998765 4553 2332234568999999
Q ss_pred HHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCce-------------eeeEEeeecCCcceEEEecH
Q psy7140 796 DKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNK-------------LPLNIECFMDDKDVHAELKR 862 (1304)
Q Consensus 796 D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~-------------~~~~ie~l~~~~d~~~~itr 862 (1304)
|+.|.+++..+. +...... -...+|++|+.++.-... ....++ +.++ ..+.+++
T Consensus 186 t~~l~~~l~~~~---~~~~~~~-------~~~~~e~iK~~~~~v~~~~~~e~~~~~~~~~~~~~~~-lpdg--~~i~i~~ 252 (375)
T 2fxu_A 186 TDYLMKILTERG---YSFVTTA-------EREIVRDIKEKLCYVALDFENEMATAASSSSLEKSYE-LPDG--QVITIGN 252 (375)
T ss_dssp HHHHHHHHHHHT---CCCCSHH-------HHHHHHHHHHHHCCCCSSHHHHHHHHHHCSTTCEEEE-CTTS--CEEEEST
T ss_pred HHHHHHHHHhcC---CCCCcHH-------HHHHHHHHHHHHHhhcccHHHHHHhhcccCccCeEEE-CCCC--CEEEECh
Confidence 999999997651 2211100 124466667666431100 011111 1122 3467888
Q ss_pred HHHH---HHHHHH-----HHHHHHHHHHHHHhcCC--CCCceeEEEEecCCCCChhHHHHHHHHcC--------CCCCCC
Q psy7140 863 NDLE---TLCEHI-----FGRIEICLNKCIAESKL--PVNAIHSIEIVGGSSRIPAFKNVIESVFH--------KPPSTT 924 (1304)
Q Consensus 863 ~efe---~l~~~~-----~~~i~~~i~~~l~~~~~--~~~~I~~V~LvGG~srip~v~~~l~~~fg--------~~~~~~ 924 (1304)
+.|+ .+++|. ...+.+.|.++|..+.. ....++.|+|+||+|++|.++++|++.++ .++...
T Consensus 253 erf~~~E~lf~p~~~~~~~~~i~~~i~~~i~~~~~~~~~~l~~~IvLtGG~s~~pG~~~rl~~el~~~~p~~~~v~v~~~ 332 (375)
T 2fxu_A 253 ERFRCPETLFQPSFIGMESAGIHETTYNSIMKCDIDIRKDLYANNVMSGGTTMYPGIADRMQKEITALAPSTMKIKIIAP 332 (375)
T ss_dssp HHHHHHHTTTCGGGGTCCSCCHHHHHHHHHHTSCHHHHHHHHTCEEEESGGGCSTTHHHHHHHHHHHHSCTTCCCCEECC
T ss_pred hheechHhhCCCccCCCCCCCHHHHHHHHHHhCCHHHHHHHHhCcEeeCCCCCCccHHHHHHHHHHHhCCCCeeEEEEcC
Confidence 8873 344442 24578888888886532 23346889999999999999999999885 223356
Q ss_pred CCchhHHHhHHHHHhh
Q psy7140 925 LNQDEAVSRGCALQCA 940 (1304)
Q Consensus 925 ~n~~eava~Gaa~~aa 940 (1304)
.||+.++++||+++|.
T Consensus 333 ~~p~~~~w~G~si~a~ 348 (375)
T 2fxu_A 333 PERKYSVWIGGSILAS 348 (375)
T ss_dssp TTTTSHHHHHHHHHHH
T ss_pred CCCCccEEcchHHhhC
Confidence 7999999999999997
No 36
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.84 E-value=7.5e-21 Score=219.15 Aligned_cols=226 Identities=11% Similarity=0.111 Sum_probs=151.2
Q ss_pred eEeCHHHHHHHHHHHHHHHHHhhhcCccceEEEeecCC-CCHH--HH--HHHHHH------------HHHcCCCeEEeec
Q psy7140 140 HVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSY-FTNN--ER--KALLTA------------ASIAGLNVLRLIN 202 (1304)
Q Consensus 140 ~~~~~~el~~~~L~~lk~~a~~~~~~~~~~~vitVPa~-~~~~--qr--~~l~~A------------~~~AGl~~~~li~ 202 (1304)
..+++..+++.+ ..|+. +.. .+.+ .++|+++|.. |... || +++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 356777777654 55543 221 2223 3699999987 6531 22 222221 2345567889999
Q ss_pred hhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHc
Q psy7140 203 ETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRY 282 (1304)
Q Consensus 203 Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~ 282 (1304)
||.||+++|.... .++..++|+|+||||||+++++ ++.+.+.+..++.++||.+||+.|.+++.+ +
T Consensus 148 e~~aa~~~~~~~~-------~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~----~- 213 (320)
T 2zgy_A 148 ESIPAGYEVLQEL-------DELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSL----A- 213 (320)
T ss_dssp SSHHHHHHHHHHS-------CTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTC----C-
T ss_pred CcHHHHHhhhccc-------cCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHH----c-
Confidence 9999999886321 2356899999999999999987 566667767788899999999999998752 1
Q ss_pred CCCCCCCHHHHHHHHHHHHHh-hhcc-ccCCceeeEEEeeecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCC
Q psy7140 283 KIDPRTNARAYIRLLSEIEKL-KKQM-SANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKL 360 (1304)
Q Consensus 283 ~~~~~~~~~~~~~L~~~~e~~-K~~L-s~~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~ 360 (1304)
+.+. . ...+|++ |..- ..... ..+ + ..-+++++.+++++.++++.+.+.+.+++.
T Consensus 214 ~~~i--~-------~~~ae~~lk~~~~~~~~~-~~i------~-----~~~~~~~~~~~i~~~~~~~~~~i~~~i~~~-- 270 (320)
T 2zgy_A 214 RTKG--S-------SYLADDIIIHRKDNNYLK-QRI------N-----DENKISIVTEAMNEALRKLEQRVLNTLNEF-- 270 (320)
T ss_dssp SBGG--G-------HHHHHHHHHTTTCHHHHH-HHS------S-----SSCTHHHHHHHHHHHHHHHHHHHHHHHTTC--
T ss_pred CCCC--C-------HHHHHHHHHHhhhhhccc-cee------c-----CchhhHHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 2222 1 1234444 3320 00000 000 0 001345666677777777776666666552
Q ss_pred CCCcccEEEEEcCCCCchhHHHHHHHhcCC---CCCCCCCchhHHHHHHHHHh
Q psy7140 361 PVNAIHSIEIVGGSSRIPAFKNVIESVFHK---PPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 361 ~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~---~~~~~~np~eaVa~Gaa~~a 410 (1304)
.+++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||+++|
T Consensus 271 --~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 --SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp --CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred --cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 568999999999998 99999999987 46778899999999999875
No 37
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=99.81 E-value=7.1e-20 Score=183.32 Aligned_cols=146 Identities=18% Similarity=0.309 Sum_probs=127.3
Q ss_pred EEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCCCC
Q psy7140 953 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKPGP 1027 (1304)
Q Consensus 953 ~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~ 1027 (1304)
+.|++||+|||+|.+ +...+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|+|++|+|
T Consensus 2 ~~Dv~p~slGi~~~g----g~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p 77 (152)
T 3h0x_A 2 NADVNALTLGIETTG----GVMTPLIKRNTAIPTKKSQIFSTAVDNQPTVMIKVYEGERAMSKDNNLLGKFELTGIPPAP 77 (152)
T ss_dssp -CCBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEECCSSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred ccceeccEEEEEEcC----CEEEEEEECcCccCEEEEEEEEeCCCCcceeeeeEEEcCccccccCcEEEEEEEeCCCCCC
Confidence 579999999999863 3456799999999999999997654 37899999987 77899999999999999999
Q ss_pred CCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHH
Q psy7140 1028 KGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAK 1107 (1304)
Q Consensus 1028 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ak 1107 (1304)
+|.+ +|+|+|++|.||+|+|++.+. .+++...++|... ...||++++++|++++++|+++|++.+++.++|
T Consensus 78 ~G~~-~I~Vtf~iD~nGiL~V~a~d~-------~tg~~~~i~I~~~-~~~ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~ 148 (152)
T 3h0x_A 78 RGVP-QIEVTFALDANGILKVSATDK-------GTGKSESITITND-KGRLTQEEIDRMVEEAEKFASEDASIKAKVESR 148 (152)
T ss_dssp TTCS-CEEEEEEECTTSEEEEEEEET-------TTCCEEEEEEECC-TTCCCHHHHHHHHHHHHHTHHHHHHHHHHHHCS
T ss_pred CCCc-eEEEEEEEcCCCEEEEEEEEc-------CCCcEeEEEEecC-CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9987 599999999999999998632 3567777888765 358999999999999999999999999999999
Q ss_pred HHHH
Q psy7140 1108 NALE 1111 (1304)
Q Consensus 1108 N~LE 1111 (1304)
|+||
T Consensus 149 n~le 152 (152)
T 3h0x_A 149 NKLE 152 (152)
T ss_dssp CCCC
T ss_pred hhcC
Confidence 9986
No 38
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=99.80 E-value=8.4e-20 Score=182.31 Aligned_cols=146 Identities=17% Similarity=0.312 Sum_probs=123.5
Q ss_pred EEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCCCC
Q psy7140 953 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKPGP 1027 (1304)
Q Consensus 953 ~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~ 1027 (1304)
+.|++||+|||+|.+ +...+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|+|++|+|
T Consensus 2 ~~Dv~p~slGie~~g----g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~dn~~LG~f~l~gipp~p 77 (152)
T 3dob_A 2 NADVAPLSLGIETAG----GVMTNLIDRNTRIPTKACKTFTTYADNQPGVSIQVYEGERAMTRDNHRLGTFELSGIPPAP 77 (152)
T ss_dssp --CBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCC
T ss_pred ceeeecceEEEEEcC----CEEEEEEECcCccCEEEEEEEEECCCCceEEEEEEEEcCccccccCceeEEEEEeCCCCCC
Confidence 679999999999863 3456799999999999999998754 37899999887 77899999999999999999
Q ss_pred CCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHH
Q psy7140 1028 KGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAK 1107 (1304)
Q Consensus 1028 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ak 1107 (1304)
+|.+ .|+|+|++|.||+|+|++.+. .+++...++|... ...||++++++|++++++++++|++.+++.++|
T Consensus 78 ~G~~-~IeVtf~iD~nGiL~Vsa~d~-------~tg~~~~i~I~~~-~~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~ 148 (152)
T 3dob_A 78 RGVP-QIEVTFNIDANGILNVSAEDK-------STGKSNRITIQNE-KGRLTQSDIDRMVHEAKQFEKEDGEQRERVQAR 148 (152)
T ss_dssp TTCC-CEEEEEEECTTCCEEEEEEET-------TTCCEEEEEECCC-----CHHHHHHHHHHHHHTHHHHHHHHHTCCCC
T ss_pred CCCc-eEEEEEEeCCCCeEEEEEEEc-------CCCCEEEEEEEcC-CCCCCHHHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 9987 599999999999999998632 3567777888765 346999999999999999999999999999999
Q ss_pred HHHH
Q psy7140 1108 NALE 1111 (1304)
Q Consensus 1108 N~LE 1111 (1304)
|+||
T Consensus 149 n~le 152 (152)
T 3dob_A 149 NQLE 152 (152)
T ss_dssp SEEC
T ss_pred hhcC
Confidence 9876
No 39
>2zgy_A Plasmid segregation protein PARM; plasmid partition, structural protein; HET: GDP; 1.90A {Escherichia coli} SCOP: c.55.1.1 c.55.1.1 PDB: 1mwk_A* 2qu4_A 1mwm_A* 2zgz_A* 2zhc_A* 3iku_A 3iky_A
Probab=99.80 E-value=5e-20 Score=212.23 Aligned_cols=227 Identities=11% Similarity=0.113 Sum_probs=150.8
Q ss_pred eeeCHHHHHHHHHHHHHHHHHhhhccccceEEEeecCC-CCHH--HH--HHHHHH------------HHHcCCceeeeec
Q psy7140 669 HVFSPEQLTAMLFTKLKDISENEIQNKVHDCVLAVPSY-FTNN--ER--KALLTA------------ASIAGLNVLRLIN 731 (1304)
Q Consensus 669 ~~~~~eel~a~~L~~l~~~a~~~~~~~~~~~VitVP~~-f~~~--qr--~~l~~A------------a~~AGl~~~~li~ 731 (1304)
..++++.+++.+ ..|++ +.. .+.+ .++|+++|.. |... || +++.+- ++.+++..+.++.
T Consensus 72 ~~~~~~~l~~i~-~aL~~-~~~-~~~~-~~lv~glP~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~i~~v~~~~ 147 (320)
T 2zgy_A 72 WQYSDVNVVAVH-HALLT-SGL-PVSE-VDIVCTLPLTEYYDRNNQPNTENIERKKANFRKKITLNGGDTFTIKDVKVMP 147 (320)
T ss_dssp GGGSHHHHHHHH-HHHHH-HSC-CSCE-EEEEEEECHHHHBCTTSSBCHHHHHHHHHHTTSCEEETTBCCCEEEEEEEEE
T ss_pred ccchHHHHHHHH-HHHHH-cCC-CCce-EEEEEcCCHHHHccCCCcccHHHHHHHHHhhcCcEecCCCcEEEEEEEEEec
Confidence 356777777654 44443 211 2223 3699999987 6541 22 222221 2344567889999
Q ss_pred hhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhc
Q psy7140 732 ETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRY 811 (1304)
Q Consensus 732 Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~ 811 (1304)
||.||+++|... ..++..++|+|+||||||+++++ ++.+.+.+..++.++||.+||+.|++++.++
T Consensus 148 e~~aa~~~~~~~-------~~~~~~~~vvDiGggttd~~v~~--~g~~~v~~~~~~~~lGg~~~~~~I~~~l~~~----- 213 (320)
T 2zgy_A 148 ESIPAGYEVLQE-------LDELDSLLIIDLGGTTLDISQVM--GKLSGISKIYGDSSLGVSLVTSAVKDALSLA----- 213 (320)
T ss_dssp SSHHHHHHHHHH-------SCTTCEEEEEEECSSCEEEEEEE--GGGCCEEEEEEECSCCTHHHHHHHHHHTTCC-----
T ss_pred CcHHHHHhhhcc-------ccCCCCEEEEEcCCCeEEEEEEe--CCeeEEeeecCCccccHHHHHHHHHHHHHHc-----
Confidence 999999988632 13457899999999999999987 5555677677788999999999999988531
Q ss_pred CCCCCCCHHHHHHHHHHHHHH-HHHhccCCceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy7140 812 KIDPRTNARAYIRLLSEIEKL-KKQMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLP 890 (1304)
Q Consensus 812 ~~~~~~~~~~~~rL~~~ae~~-K~~Ls~~~~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~ 890 (1304)
+.++ + ...+|++ |..-. ........+. .-+++++.+++++.++++.+.+.+.++..
T Consensus 214 ~~~i--~-------~~~ae~~lk~~~~------~~~~~~~i~~-----~~~~~~~~~~i~~~~~~~~~~i~~~i~~~--- 270 (320)
T 2zgy_A 214 RTKG--S-------SYLADDIIIHRKD------NNYLKQRIND-----ENKISIVTEAMNEALRKLEQRVLNTLNEF--- 270 (320)
T ss_dssp SBGG--G-------HHHHHHHHHTTTC------HHHHHHHSSS-----SCTHHHHHHHHHHHHHHHHHHHHHHHTTC---
T ss_pred CCCC--C-------HHHHHHHHHHhhh------hhcccceecC-----chhhHHHHHHHHHHHHHHHHHHHHHHHhh---
Confidence 2222 1 1234444 32200 0000000000 11345666667777777776666666552
Q ss_pred CCceeEEEEecCCCCChhHHHHHHHHcCC---CCCCCCCchhHHHhHHHHHh
Q psy7140 891 VNAIHSIEIVGGSSRIPAFKNVIESVFHK---PPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 891 ~~~I~~V~LvGG~srip~v~~~l~~~fg~---~~~~~~n~~eava~Gaa~~a 939 (1304)
.+++.|+|+||+|++ +++.|++.|+. ++....||++|+|+||++++
T Consensus 271 -~~~~~vvl~GGga~l--l~~~l~~~~~~~~~~~~~~~~P~~a~A~G~~~~~ 319 (320)
T 2zgy_A 271 -SGYTHVMVIGGGAEL--ICDAVKKHTQIRDERFFKTNNSQYDLVNGMYLIG 319 (320)
T ss_dssp -CCCCEEEEESTTHHH--HHHHHHHTSCCCGGGEECCSCGGGHHHHHHHHHH
T ss_pred -cCCCeEEEECChHHH--HHHHHHHHhCCCCCceeeCCCcHHHHHHHHHHhc
Confidence 568999999999998 99999999987 47778899999999999875
No 40
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=99.79 E-value=6.9e-20 Score=182.71 Aligned_cols=145 Identities=18% Similarity=0.286 Sum_probs=126.0
Q ss_pred EEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeecCCCCC
Q psy7140 953 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKDIKPGP 1027 (1304)
Q Consensus 953 ~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~ 1027 (1304)
+.|++||+|||+|.+ +...+||++|+++|++++.+|++.. .+.|.+|+|+. ++.+|..||+|.|+|++|+|
T Consensus 2 ~~DV~p~slGie~~g----g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~i~VyqGe~~~~~dn~~LG~f~l~gipp~p 77 (151)
T 3dqg_A 2 NADVTPLSLGIETLG----GIMTKLITRNTTIPTKKSQVFSTAADGQTQVQIKVFQGEREMATSNKLLGQFSLVGIPPAP 77 (151)
T ss_dssp --CBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEEEESSTTCCEEEEEEEESSCSBGGGSEEEEEEEEECCCCCC
T ss_pred cceeeeeEEEEEEcC----CEEEEEEECcCccCEEEEEEEEECCCCcceEEEEEEEcCCcccccCcEEEEEEEeCCCCCC
Confidence 579999999999863 3456799999999999999998754 48899999987 77899999999999999999
Q ss_pred CCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHH
Q psy7140 1028 KGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAK 1107 (1304)
Q Consensus 1028 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ak 1107 (1304)
+|.+ .|+|+|++|.||+|+|++.+. .+++...++|... ..||++++++|++++++|+++|++.+++.++|
T Consensus 78 ~G~~-~IeVtf~iD~nGiL~Vsa~d~-------~tg~~~~i~I~~~--~~Ls~~ei~~~~~~a~~~~~~D~~~~~~~~~~ 147 (151)
T 3dqg_A 78 RGVP-QVEVTFDIDANGIVNVSARDR-------GTGKEQQIVIQSS--GGLSKDQIENMIKEAEKNAAEDAKRKELVEVI 147 (151)
T ss_dssp TTCS-CEEEEEEECTTSEEEEEEEET-------TTCCEEEEEEECS--SSSCHHHHHHHHHHHHHHHHHHTTCCCEEECB
T ss_pred CCCc-EEEEEEEeccCcEEEEEEEEc-------cCCCEeEEEEecC--CCCCHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 9987 599999999999999998632 3567778888765 69999999999999999999999999999999
Q ss_pred HHHH
Q psy7140 1108 NALE 1111 (1304)
Q Consensus 1108 N~LE 1111 (1304)
|+||
T Consensus 148 n~~e 151 (151)
T 3dqg_A 148 NQAE 151 (151)
T ss_dssp CCCC
T ss_pred hhcC
Confidence 9875
No 41
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=99.76 E-value=1.6e-18 Score=175.09 Aligned_cols=146 Identities=19% Similarity=0.319 Sum_probs=126.3
Q ss_pred EEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecce----eEEEEEEecC-CCCCCccceeEEeecCCCCC
Q psy7140 953 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANV----FDVQAYYDCP-VPYPTQFVGQFIIKDIKPGP 1027 (1304)
Q Consensus 953 ~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~~----~~i~~~~~~~-~~~~~~~i~~~~i~~i~~~~ 1027 (1304)
+.|++||+|||++.+ +...+||++|+++|++++.+|++..+ +.|.+|||+. ++.+|..||+|.|+|++|.|
T Consensus 2 v~Dv~p~slGi~~~~----g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p 77 (152)
T 2op6_A 2 NADVNPLTLGIETVG----GVMTKLIGRNTVIPTKKSQVFSTAADSQSAVSIVIYEGERPMVMDNHKLGNFDVTGIPPAP 77 (152)
T ss_dssp -CCBCSSCEEEEETT----TEEEEEECTTCBSSEEEEEEEEESSTTCCCEEEEEEESSCSBGGGSEEEEEEEECCCCCCC
T ss_pred ceEeecccEEEEEeC----CEEEEEEeCCCcccEeEEEEEEeCCCCCcEEEEEEEEeCCccCccCCEeEEEEEECCCCCC
Confidence 579999999999853 34568999999999999999987543 9999999977 77789999999999999999
Q ss_pred CCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeeccccccCccCChHHHHHHHHHHhhhccCchhHHHHHHHH
Q psy7140 1028 KGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDSVFNHYLANIKVHDLFELECKMQDNDRQEKDRVDAK 1107 (1304)
Q Consensus 1028 ~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ls~~ei~~~~~~~~~~~~~D~~~~~~~~ak 1107 (1304)
+|.+ +|+|+|++|.||+|+|++.+. .+++...++|... ...||.++++++++++++|..+|++.+++.++|
T Consensus 78 ~G~~-~I~V~f~id~nGiL~V~a~d~-------~tg~~~~i~i~~~-~~~ls~eei~~~~~~~~~~~~~d~~~~~~~~~k 148 (152)
T 2op6_A 78 RGVP-QIEVTFEIDVNGILHVSAEDK-------GTGNKNKLTITND-HNRLSPEDIERMINDADKFAADDQAQKEKVESR 148 (152)
T ss_dssp TTCS-CEEEEEEECTTSCEEEEEEET-------TTCCEEEEEECSS-SSCCCHHHHHHHHHHHHHTHHHHHHHHHHSCCC
T ss_pred CCCc-eEEEEEEECCCcEEEEEEEEe-------cCCcEEEEEeecc-ccCCCHHHHHHHHHHHHHhHhccHHHHHHHHHH
Confidence 9998 599999999999999998633 2455667777665 357999999999999999999999999999999
Q ss_pred HHHH
Q psy7140 1108 NALE 1111 (1304)
Q Consensus 1108 N~LE 1111 (1304)
|+||
T Consensus 149 n~~e 152 (152)
T 2op6_A 149 NELE 152 (152)
T ss_dssp SEEC
T ss_pred hhcC
Confidence 9876
No 42
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.70 E-value=4.8e-16 Score=175.19 Aligned_cols=217 Identities=13% Similarity=0.115 Sum_probs=137.0
Q ss_pred HHHHHHHHHHHHHHHhhhcCccceEE-EeecCCCCHHHHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCC
Q psy7140 146 QLTAMLFTKLKDISENEIQNKVHDCV-LAVPSYFTNNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQN 224 (1304)
Q Consensus 146 el~~~~L~~lk~~a~~~~~~~~~~~v-itVPa~~~~~qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~ 224 (1304)
++++.+|+.+++.+.... .++. +++..+ . ..++......|+||+|+++++......
T Consensus 37 e~a~~vl~~~~~~a~~~~----~~~~~~a~t~~-~-----------~~a~~~~~~~Vne~~aha~a~~~~~~~------- 93 (276)
T 4ehu_A 37 TGPSRVLEKLYGKTGLAR----EDIKKVVVTGY-G-----------RMNYSDADKQISELSCHARGVNFIIPE------- 93 (276)
T ss_dssp SHHHHHHHHHHHHHCCCG----GGEEEEEEEST-T-----------GGGCCSCSEECCHHHHHHHHHHHHSTT-------
T ss_pred HHHHHHHHHHHHHCCCcc----hhccccccCch-H-----------HHHhhCCCcccchHHHHHHHHHHhCCC-------
Confidence 456677877777664332 2222 222222 1 236677789999999999988664432
Q ss_pred CcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhh
Q psy7140 225 PRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLK 304 (1304)
Q Consensus 225 ~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K 304 (1304)
...|+|+|||+++++++. .++.+++....++...||.+|++.+++++...+.... ..+..++
T Consensus 94 --~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a~~l~~~~~~~~---------------~~~~~a~ 155 (276)
T 4ehu_A 94 --TRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMAKIIEVDVSELG---------------SISMNSQ 155 (276)
T ss_dssp --CCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHHHHHTCCGGGHH---------------HHHTTCS
T ss_pred --CCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHHHHhccChhhhH---------------HHHhcCC
Confidence 136789999999999884 5678888888889999999999999988743322110 0111111
Q ss_pred h--ccccCCceeeEEEeeecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHH
Q psy7140 305 K--QMSANSNKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKN 382 (1304)
Q Consensus 305 ~--~Ls~~~~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~ 382 (1304)
. .+++... .+..-.-....-.....++++..+.+.+.+.+....... ..++.|+|+||.+++|.||+
T Consensus 156 ~~~~i~~~~~-------~f~~s~~~~~~~~~~~~~di~a~~~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~ 224 (276)
T 4ehu_A 156 NEVSISSTCT-------VFAESEVISHLSENAKIEDIVAGIHTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVR 224 (276)
T ss_dssp SCCCCCCCSH-------HHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHH
T ss_pred CCCCcCCccc-------hhhhhHHHHhhhccccHHHHHHHHHHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHH
Confidence 1 1111000 000000000000001124455555555554444443332 35678999999999999999
Q ss_pred HHHHhcCCCCCCCCCchhHHHHHHHHHhhHhc
Q psy7140 383 VIESVFHKPPSTTLNQDEAVSRGCALQCAILS 414 (1304)
Q Consensus 383 ~l~~~f~~~~~~~~np~eaVa~Gaa~~aa~ls 414 (1304)
.+++.||.++..+.||++++|+|||++|....
T Consensus 225 ~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 225 AMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 99999999999999999999999999996543
No 43
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.70 E-value=5.5e-18 Score=200.54 Aligned_cols=214 Identities=16% Similarity=0.206 Sum_probs=89.6
Q ss_pred ceEEEeecCCCCHHHHHHHHHHH-HHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEE
Q psy7140 168 HDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 246 (1304)
Q Consensus 168 ~~~vitVPa~~~~~qr~~l~~A~-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~ 246 (1304)
..+++|+|+.++..+|+++.+++ +.+|++.+.+++||.||+++++. ...+|+|+|+|||+++.+ .
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------------~~~lVVDiG~g~T~v~pv--~ 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------------LTGVVVDSGDGVTHICPV--Y 170 (394)
T ss_dssp -------------------------------------------------------------CCEEEECSSCEEEECE--E
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------------ceEEEEEcCCCceEeeee--E
Confidence 35899999999999999998865 77899999999999999998864 135899999999999875 4
Q ss_pred CCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCc--------------
Q psy7140 247 KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSN-------------- 312 (1304)
Q Consensus 247 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~-------------- 312 (1304)
+|..- ........+||+++|+.|.+++..+ .+........ ..+|++|+.++....
T Consensus 171 ~G~~~-~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~~-------~~ae~iK~~~~~v~~d~~~~~~~~~~~~~ 239 (394)
T 1k8k_B 171 EGFSL-PHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSADF-------ETVRMIKEKLCYVGYNIEQEQKLALETTV 239 (394)
T ss_dssp TTEEC-STTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTTH-------HHHHHHHHHHCCCCSSHHHHHHHHHHCST
T ss_pred CCEEc-ccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHHH-------HHHHHHHHhheeEecCHHHHHHhhccCCc
Confidence 55432 2122345899999999999998643 1222222222 334555555432110
Q ss_pred -eeeEEEeeecCCcceEEEEcHHHHHHHHHHHH---------HHHHHHHHHHHHhCCC--CCCcccEEEEEcCCCCchhH
Q psy7140 313 -KLPLNIECFMDDKDVHAELKRNDLETLCEHIF---------GRIEICLNKCIAESKL--PVNAIHSIEIVGGSSRIPAF 380 (1304)
Q Consensus 313 -~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~---------~~i~~~i~~~l~~~~~--~~~~i~~ViLvGG~sr~p~v 380 (1304)
...+.+ -+| ..++|+++.|+ +.+.++ ..|.+.|.++|..... ...-.+.|+|+||+|++|.+
T Consensus 240 ~~~~~~l---pdg--~~i~i~~erf~-~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~ 313 (394)
T 1k8k_B 240 LVESYTL---PDG--RIIKVGGERFE-APEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGL 313 (394)
T ss_dssp TCEEEEC---TTS--CEEEECTHHHH-TGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTH
T ss_pred CceEEEC---CCC--CEEEECchhhc-ChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccH
Confidence 011111 122 25677888774 223332 3477888888887643 22335789999999999999
Q ss_pred HHHHHHhcCC-----------------CC--CCCCCchhHHHHHHHHHhhH
Q psy7140 381 KNVIESVFHK-----------------PP--STTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 381 ~~~l~~~f~~-----------------~~--~~~~np~eaVa~Gaa~~aa~ 412 (1304)
.+.|++.++. ++ ....+|..++.+|++++|..
T Consensus 314 ~~rl~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilasl 364 (394)
T 1k8k_B 314 PSRLERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLADI 364 (394)
T ss_dssp HHHHHHHHHHHHHHHTCSSCCCTTCCCCC----------------------
T ss_pred HHHHHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhCC
Confidence 9998877742 11 22456778999999999863
No 44
>4ehu_A Activator of 2-hydroxyisocaproyl-COA dehydratase; actin fold, ATPase, electron transfer, ATP/ADP binding; HET: ANP; 1.60A {Clostridium difficile} PDB: 4eht_A* 4eia_A
Probab=99.66 E-value=2.4e-15 Score=169.46 Aligned_cols=181 Identities=13% Similarity=0.096 Sum_probs=124.9
Q ss_pred HcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHHH
Q psy7140 721 IAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILA 800 (1304)
Q Consensus 721 ~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l~ 800 (1304)
.++...+..|+|++|+++++.+... ....|+|+|||+++++++. .++.+++....++...|+-+|+..++
T Consensus 68 ~a~~~~~~~Vne~~aha~a~~~~~~---------~~~~vl~lgG~~~~~~~~~-~~g~~~~~~~~~~~~~g~G~f~d~~a 137 (276)
T 4ehu_A 68 MNYSDADKQISELSCHARGVNFIIP---------ETRTIIDIGGQDAKVLKLD-NNGRLLNFLMNDKCAAGTGRFLDVMA 137 (276)
T ss_dssp GGCCSCSEECCHHHHHHHHHHHHST---------TCCEEEEECSSCEEEEEEC-TTSCEEEEEEECSCSTTSHHHHHHHH
T ss_pred HHhhCCCcccchHHHHHHHHHHhCC---------CCCeEEEEcCCCceEEEEE-ecCceEEEEeCCCcCcchhhHHHHHH
Confidence 3677888999999999988765432 2246899999999999884 56788888888899999999999999
Q ss_pred HHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCceeeeEEeeecCCcceEE--------EecHHHHHHHHHHH
Q psy7140 801 EYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFMDDKDVHA--------ELKRNDLETLCEHI 872 (1304)
Q Consensus 801 ~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~~~~ie~l~~~~d~~~--------~itr~efe~l~~~~ 872 (1304)
+++...|..... ..+.+.. +..+. ..+..+ .-.....++++..+
T Consensus 138 ~~l~~~~~~~~~---------------------~~~~a~~---~~~i~----~~~~~f~~s~~~~~~~~~~~~~di~a~~ 189 (276)
T 4ehu_A 138 KIIEVDVSELGS---------------------ISMNSQN---EVSIS----STCTVFAESEVISHLSENAKIEDIVAGI 189 (276)
T ss_dssp HHHTCCGGGHHH---------------------HHTTCSS---CCCCC----CCSHHHHHHHHHHHHHTTCCHHHHHHHH
T ss_pred HHhccChhhhHH---------------------HHhcCCC---CCCcC----CccchhhhhHHHHhhhccccHHHHHHHH
Confidence 988554432110 0000000 00000 000000 00001134566666
Q ss_pred HHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhc
Q psy7140 873 FGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 873 ~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls 943 (1304)
.+.+.+.+....... ..++.|+|+||.+++|.|++.|++.||.++..+.||++++|+|||++|....
T Consensus 190 ~~~v~~~l~~~~~~~----~~~~~vvl~GGva~n~~lr~~l~~~~g~~~~~p~~p~~~~A~GAAl~A~~~~ 256 (276)
T 4ehu_A 190 HTSVAKRVSSLVKRI----GVQRNVVMVGGVARNSGIVRAMAREINTEIIVPDIPQLTGALGAALYAFDEA 256 (276)
T ss_dssp HHHHHHHHHHHHHHH----CCCSSEEEESGGGGCHHHHHHHHHHHTSCEECCSSGGGHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhc----ccCCeEEEecCccchHHHHHHHHHHHCCCeeeCCCcchHHHHHHHHHHHHHH
Confidence 666655555444433 3467899999999999999999999999999999999999999999997543
No 45
>1k8k_B ARP2, actin-like protein 2; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: c.55.1.1 PDB: 1tyq_B* 1u2v_B* 2p9i_B* 2p9l_B 2p9n_B* 2p9p_B* 2p9s_B* 2p9u_B* 3dxk_B* 3dxm_B* 3rse_B 2p9k_B*
Probab=99.66 E-value=2.6e-17 Score=194.70 Aligned_cols=216 Identities=15% Similarity=0.196 Sum_probs=92.1
Q ss_pred ceEEEeecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEE
Q psy7140 697 HDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 775 (1304)
Q Consensus 697 ~~~VitVP~~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 775 (1304)
..++||+|++++..+|+++.+++ +.+|++.+.++++|.|||++++. ...+|+|+|+|+|+++.+.
T Consensus 105 ~~vllt~p~~~~~~~r~~~~e~~fe~~~~~~~~~~~~~~~a~~a~g~------------~~~lVVDiG~g~T~v~pv~-- 170 (394)
T 1k8k_B 105 CKILLTEPPMNPTKNREKIVEVMFETYQFSGVYVAIQAVLTLYAQGL------------LTGVVVDSGDGVTHICPVY-- 170 (394)
T ss_dssp -------------------------------------------------------------CCEEEECSSCEEEECEE--
T ss_pred CcEEEEECCCCCHHHHHHHHHHhhhccCCCeEEEEhhHHHHHHhCCC------------ceEEEEEcCCCceEeeeeE--
Confidence 45999999999999999998865 88899999999999999998864 2468999999999998763
Q ss_pred CCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCce-------------
Q psy7140 776 KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNK------------- 842 (1304)
Q Consensus 776 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~------------- 842 (1304)
+|.. +.......++||+++|+.|.+++..+ .+....... ...+|++|+.++.-...
T Consensus 171 ~G~~-~~~~~~~~~~GG~~lt~~l~~~l~~~---~~~~~~~~~-------~~~ae~iK~~~~~v~~d~~~~~~~~~~~~~ 239 (394)
T 1k8k_B 171 EGFS-LPHLTRRLDIAGRDITRYLIKLLLLR---GYAFNHSAD-------FETVRMIKEKLCYVGYNIEQEQKLALETTV 239 (394)
T ss_dssp TTEE-CSTTCEEESCCHHHHHHHHHHHHHHT---TCCCCTTTT-------HHHHHHHHHHHCCCCSSHHHHHHHHHHCST
T ss_pred CCEE-cccceEEeeccHHHHHHHHHHHHHhc---CCCCCcHHH-------HHHHHHHHHhheeEecCHHHHHHhhccCCc
Confidence 3432 21112345899999999999999754 122221122 24567777776532110
Q ss_pred eeeEEeeecCCcceEEEecHHHHH---HHHHHH-----HHHHHHHHHHHHHhcCCC--CCceeEEEEecCCCCChhHHHH
Q psy7140 843 LPLNIECFMDDKDVHAELKRNDLE---TLCEHI-----FGRIEICLNKCIAESKLP--VNAIHSIEIVGGSSRIPAFKNV 912 (1304)
Q Consensus 843 ~~~~ie~l~~~~d~~~~itr~efe---~l~~~~-----~~~i~~~i~~~l~~~~~~--~~~I~~V~LvGG~srip~v~~~ 912 (1304)
....++ +.++ ..++|+++.|+ .+++|. ...+.+.|.++|.....+ ..-++.|+|+||+|++|.+.++
T Consensus 240 ~~~~~~-lpdg--~~i~i~~erf~~~E~Lf~p~~~~~~~~~i~~~i~~~i~~~~~d~r~~l~~nIvLtGG~s~~~G~~~r 316 (394)
T 1k8k_B 240 LVESYT-LPDG--RIIKVGGERFEAPEALFQPHLINVEGVGVAELLFNTIQAADIDTRSEFYKHIVLSGGSTMYPGLPSR 316 (394)
T ss_dssp TCEEEE-CTTS--CEEEECTHHHHTGGGGTCGGGGTCCSCCHHHHHHHHHHHSCTTTHHHHHTTCEEESGGGCSTTHHHH
T ss_pred CceEEE-CCCC--CEEEECchhhcChHhhCCchhccCCCCCHHHHHHHHHHhCCHHHHHHHHhCEEEeCcccccccHHHH
Confidence 001111 2222 24677877773 233331 234777888888876543 2336789999999999999999
Q ss_pred HHHHcCC-----------------CC--CCCCCchhHHHhHHHHHhh
Q psy7140 913 IESVFHK-----------------PP--STTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 913 l~~~fg~-----------------~~--~~~~n~~eava~Gaa~~aa 940 (1304)
|++.++. ++ ..+.+|..++..|++++|.
T Consensus 317 l~~el~~~~~~~~~~~~~~~p~~~~v~v~~~~~~~~~~w~Ggsilas 363 (394)
T 1k8k_B 317 LERELKQLYLERVLKGDVEKLSKFKIRIEDPPRRKHMVFLGGAVLAD 363 (394)
T ss_dssp HHHHHHHHHHHHTCSSCCCTTCCCCC---------------------
T ss_pred HHHHHHHHHhhhhcccccCCCCceEEEEecCCCcceeEEhhhHHhhC
Confidence 9887742 12 2245777899999999886
No 46
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.63 E-value=1.5e-15 Score=175.95 Aligned_cols=208 Identities=13% Similarity=0.134 Sum_probs=142.1
Q ss_pred eEEEeecCCCCHHHH-HHHHHHHHHcCC------------CeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecC
Q psy7140 169 DCVLAVPSYFTNNER-KALLTAASIAGL------------NVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGY 235 (1304)
Q Consensus 169 ~~vitVPa~~~~~qr-~~l~~A~~~AGl------------~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~Gg 235 (1304)
.+++++|..+...+| +++++++..++- ..+.+++||.||+++|+...... ...-.+..++|+|+||
T Consensus 115 ~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~-~~~~~~~~~~vvDiGg 193 (355)
T 3js6_A 115 VIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKV-FKAFTEGKYSVLDFGS 193 (355)
T ss_dssp EEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEE-CHHHHTCEEEEEEECS
T ss_pred EEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCcc-ccccccCcEEEEEeCC
Confidence 789999999988887 589999885543 56789999999999987643110 0000356799999999
Q ss_pred CeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceee
Q psy7140 236 SALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLP 315 (1304)
Q Consensus 236 gT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~ 315 (1304)
||||++++ .++.+. ...++...+||..+++.|.+++.+++. +.+.. . ...++-+. +..
T Consensus 194 gTtd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~-------~~i~~g~~-~~~------ 251 (355)
T 3js6_A 194 GTTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--P-------RMIEKGLE-YKQ------ 251 (355)
T ss_dssp SCEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--H-------HHHHSCCC----------
T ss_pred CcEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--H-------HHHhcCCc-ccc------
Confidence 99999998 344432 112334579999999999999865431 22111 1 12222221 000
Q ss_pred EEEeeecCCcc--eEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchh--HHHHHHHhcCCC
Q psy7140 316 LNIECFMDDKD--VHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPA--FKNVIESVFHKP 391 (1304)
Q Consensus 316 ~~i~~~~~~~~--~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~--v~~~l~~~f~~~ 391 (1304)
.+.+ -.+.+ .+.+++.+++++++|...+++.+.+ ++.++.|+|+||++.++. +++.|++.|+..
T Consensus 252 -------~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~~ 319 (355)
T 3js6_A 252 -------CKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEKA 319 (355)
T ss_dssp -----------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEECC
T ss_pred -------ccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCCC
Confidence 0000 01123 3567788888888888888888764 466899999999999998 999999998643
Q ss_pred CCCCCCchhHHHHHHHHHhhHhcC
Q psy7140 392 PSTTLNQDEAVSRGCALQCAILSP 415 (1304)
Q Consensus 392 ~~~~~np~eaVa~Gaa~~aa~ls~ 415 (1304)
.||..|+|+|+..++..+.+
T Consensus 320 ----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 320 ----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp ----SSGGGHHHHHHHHHHHHHHH
T ss_pred ----CCcHHHHHHHHHHHHHHHHh
Confidence 89999999999999877653
No 47
>3js6_A Uncharacterized PARM protein; partition, segregation, filament, unknown function; 1.95A {Staphylococcus aureus}
Probab=99.61 E-value=2.8e-15 Score=173.59 Aligned_cols=209 Identities=14% Similarity=0.138 Sum_probs=140.8
Q ss_pred ceEEEeecCCCCHHHH-HHHHHHHHHcCC------------ceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeC
Q psy7140 697 HDCVLAVPSYFTNNER-KALLTAASIAGL------------NVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFG 763 (1304)
Q Consensus 697 ~~~VitVP~~f~~~qr-~~l~~Aa~~AGl------------~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~G 763 (1304)
..+++++|..+...+| +++++++...+- ..+.+++||.||+++|++..... ...-.+..++|+|+|
T Consensus 114 ~~lvvGLP~~~~~~~k~~~l~~~l~~~~~v~~~g~~~~i~I~~V~v~pE~~~a~~~~~~~~~~~-~~~~~~~~~~vvDiG 192 (355)
T 3js6_A 114 VVIATGMPSNEIGTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPMGTLLDLNMENGKV-FKAFTEGKYSVLDFG 192 (355)
T ss_dssp EEEEEEECGGGTTSHHHHHHHHHHSSCEEEEETTEEEEEEEEEEEEEEHHHHHHHHTTEETTEE-CHHHHTCEEEEEEEC
T ss_pred EEEEEeCCHHHHhHHHHHHHHHHhCCCeEEEECCEEEEEEEEEEEEEeCcHHHHHHHHHccCcc-ccccccCcEEEEEeC
Confidence 3789999999988887 589999875543 56789999999999987643100 000046789999999
Q ss_pred CceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCcee
Q psy7140 764 YSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKL 843 (1304)
Q Consensus 764 ggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~ 843 (1304)
|||||++++ .++.+. ...++...+||..+++.+.+++.+++. +.... .. ..++.+.
T Consensus 193 ggTtd~~v~--~~~~~~-~~~s~s~~~G~~~~~~~i~~~l~~~~~---g~~l~--~~-------~i~~g~~--------- 248 (355)
T 3js6_A 193 SGTTIIDTY--QNMKRV-EEESFVINKGTIDFYKRIASHVSKKSE---GASIT--PR-------MIEKGLE--------- 248 (355)
T ss_dssp SSCEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHHTC-----------C--HH-------HHHSCCC---------
T ss_pred CCcEEEEEE--cCCEEc-cccccCcchHHHHHHHHHHHHHHHhcC---CCcCC--HH-------HHhcCCc---------
Confidence 999999998 344321 112334579999999999999877641 11111 11 1111000
Q ss_pred eeEEeeecCCcc--eEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChh--HHHHHHHHcCC
Q psy7140 844 PLNIECFMDDKD--VHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPA--FKNVIESVFHK 919 (1304)
Q Consensus 844 ~~~ie~l~~~~d--~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~--v~~~l~~~fg~ 919 (1304)
.. ..+.+ -...+ .+.+++.+++++++|...|++.+.+ ++.++.|+|+||++.++. +++.|++.|+.
T Consensus 249 -~~----~~~~~~~k~~di-~~~i~~a~~~~~~~I~~~i~~~l~~----~~~~~~Ivl~GGGa~l~~~~l~~~i~~~~~~ 318 (355)
T 3js6_A 249 -YK----QCKLNQKTVIDF-KDEFYKEQDSLIEEVMSNFEITVGN----INSIDRIIVTGGGANIHFDSLSHYYSDVFEK 318 (355)
T ss_dssp ------------------C-HHHHHHHHHHHHHHHHHHHHHHTCC----TTSCSEEEEESTTHHHHHHHHHHHSSSCEEC
T ss_pred -cc----cccccccccccH-HHHHHHHHHHHHHHHHHHHHHHhhc----hhhccEEEEECcchhcchhhHHHHHHHHCCC
Confidence 00 00000 01122 3457778888888888888888864 466799999999999998 88999988854
Q ss_pred CCCCCCCchhHHHhHHHHHhhHhcC
Q psy7140 920 PPSTTLNQDEAVSRGCALQCAILSP 944 (1304)
Q Consensus 920 ~~~~~~n~~eava~Gaa~~aa~ls~ 944 (1304)
. .||..|+|+|+..++..+..
T Consensus 319 ~----~~p~~anA~G~~~~~~~~~~ 339 (355)
T 3js6_A 319 A----DDSQFSNVRGYEKLGELLKN 339 (355)
T ss_dssp C----SSGGGHHHHHHHHHHHHHHH
T ss_pred C----CCcHHHHHHHHHHHHHHHHh
Confidence 2 89999999999999887654
No 48
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.50 E-value=1.7e-14 Score=165.87 Aligned_cols=204 Identities=12% Similarity=0.113 Sum_probs=143.6
Q ss_pred ceEEEeecCCCCH--HHHHHHHHHHHHc--------C------CCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEE
Q psy7140 168 HDCVLAVPSYFTN--NERKALLTAASIA--------G------LNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFV 231 (1304)
Q Consensus 168 ~~~vitVPa~~~~--~qr~~l~~A~~~A--------G------l~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~ 231 (1304)
..++++.|..+.. .+|+.+++....- | +..+.+++||.+|.+.+. . ..+...++|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~-----~~~~~~v~vv 177 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---E-----NFKNKNVAVI 177 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---C-----CCTTCEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---h-----hhccCCEEEE
Confidence 4789999998774 3677787776621 2 134678999988886552 1 1245789999
Q ss_pred EecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCC
Q psy7140 232 DFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANS 311 (1304)
Q Consensus 232 D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~ 311 (1304)
|+||||||++++. .+.+ +.+.++...+||.++++.|.+++.. .+++..... ..++++|+. ..
T Consensus 178 DiGggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~-g~-- 239 (329)
T 4apw_A 178 DFGGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN-GY-- 239 (329)
T ss_dssp EECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS-CS--
T ss_pred EeCCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc-CC--
Confidence 9999999999977 4554 3223345689999999999988643 045544332 123455543 10
Q ss_pred ceeeEEEeeecCCcceEEEEcHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCC
Q psy7140 312 NKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP 391 (1304)
Q Consensus 312 ~~~~~~i~~~~~~~~~~~~itr~~fe~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~ 391 (1304)
... +.++ ..++.+++++.+++++++|.+.+++. +.+++.++.|+|+||++.+ +.+.|++.|+.+
T Consensus 240 --~~~-------g~~~-~~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~ 303 (329)
T 4apw_A 240 --MKK-------GGEI-DTESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNN 303 (329)
T ss_dssp --SCE-------ECTT-CCSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTC
T ss_pred --ccc-------CCcc-hhHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCC
Confidence 000 1111 13567888888888888888887766 3556668999999999998 569999999877
Q ss_pred CCCCCCchhHHHHHHHHHhhHh
Q psy7140 392 PSTTLNQDEAVSRGCALQCAIL 413 (1304)
Q Consensus 392 ~~~~~np~eaVa~Gaa~~aa~l 413 (1304)
+....||..|+|+|+..++...
T Consensus 304 v~v~~~P~~a~a~G~~~~~~~k 325 (329)
T 4apw_A 304 SIITNNSQWTTCEGLYKVAVAK 325 (329)
T ss_dssp EECCSSGGGHHHHHHHHHHHHH
T ss_pred CEecCCChhhHHHHHHHHHhhh
Confidence 7778899999999999887654
No 49
>4apw_A ALP12; actin-like protein; 19.70A {Clostridium tetani}
Probab=99.42 E-value=9.2e-14 Score=159.70 Aligned_cols=203 Identities=12% Similarity=0.123 Sum_probs=140.4
Q ss_pred ceEEEeecCCCCH--HHHHHHHHHHHHc--------C------CceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEE
Q psy7140 697 HDCVLAVPSYFTN--NERKALLTAASIA--------G------LNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFV 760 (1304)
Q Consensus 697 ~~~VitVP~~f~~--~qr~~l~~Aa~~A--------G------l~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~ 760 (1304)
..+++++|..+-. .+|+.+++....- | +..+.+++|+.+|.+.+. . ..+...++|+
T Consensus 106 v~lv~gLP~~~~~~~~~k~~~~~~l~~~~~v~~~~~g~~~~i~I~~v~v~pe~~ga~~~~~---~-----~~~~~~v~vv 177 (329)
T 4apw_A 106 VQLVLACPLSVLRNAKAKEEYRDYIKGNGEITVKVDDKEYSFEITDITIKAEGSGVLFLEQ---E-----NFKNKNVAVI 177 (329)
T ss_dssp EEEEEEECGGGTTSSTTTTHHHHHHSSCEEECSSTTCCCEEEEEEEEEEEEHHHHHHHHSC---C-----CCTTCEEEEE
T ss_pred EEEEEcCCHHHhcchhHHHHHHHHhcCCceEEEEECCEEEEEEEeEEEEEeccHHHHhhcc---h-----hhccCCEEEE
Confidence 4789999988764 3687887776521 2 134678899988886642 1 1356789999
Q ss_pred EeCCceeEEEEEEEECCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCC
Q psy7140 761 DFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANS 840 (1304)
Q Consensus 761 D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~ 840 (1304)
|+||||||+++++ .+.+ +...++...+||.++++.|.+++.. .+|+..+.. ..++++|+. ..
T Consensus 178 DiGggTtd~~v~~--~g~~-~~~~~~~~~~G~~~~~~~i~~~l~~---~~~g~~i~~---------~~~e~i~~~-g~-- 239 (329)
T 4apw_A 178 DFGGLNMGFSLYR--NCVV-NPSERFIEEHGVKDLIIRVGDALTD---LNNGNLITN---------EQAESALNN-GY-- 239 (329)
T ss_dssp EECSSCEEEEEEE--TTEE-CGGGCEEESCCHHHHHHHHHTSSSS---CSSCSCTTS---------BTTTTCSSS-CS--
T ss_pred EeCCCcEEEEEEE--CCEE-eeccccchhhHHHHHHHHHHHHHHh---hccCCCCCH---------HHHHHHHhc-CC--
Confidence 9999999999987 4443 2223345679999999999988755 034433322 123333332 10
Q ss_pred ceeeeEEeeecCCcceEEEecHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCC
Q psy7140 841 NKLPLNIECFMDDKDVHAELKRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP 920 (1304)
Q Consensus 841 ~~~~~~ie~l~~~~d~~~~itr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~ 920 (1304)
.. .+.+.. .+..+++++.+++++++|.+.+++. +.+++.++.|+|+||++.+ +.+.|++.|+.+
T Consensus 240 --~~-------~g~~~~-~~~~~~i~~~~~e~~~~I~~~i~~~----~~~~~~~~~IvltGGGA~l--~~~~l~~~~~~~ 303 (329)
T 4apw_A 240 --MK-------KGGEID-TESSTVIKKVKEKFLKDAIKLIEKR----GFKLDQLDSLIFIGGTTQK--LKEQISKTYPNN 303 (329)
T ss_dssp --SC-------EECTTC-CSTTHHHHHHHHHHHHHHHHHHHHH----TCCTTSCSEEEEESTTHHH--HHHHHHHHSTTC
T ss_pred --cc-------cCCcch-hHHHHHHHHHHHHHHHHHHHHHHHc----CCCHHHccEEEEECChHHH--HHHHHHHHcCCC
Confidence 00 011111 3456778888888888888877766 2455568999999999998 569999999977
Q ss_pred CCCCCCchhHHHhHHHHHhhH
Q psy7140 921 PSTTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 921 ~~~~~n~~eava~Gaa~~aa~ 941 (1304)
+....||..|+|+|+..++..
T Consensus 304 v~v~~~P~~a~a~G~~~~~~~ 324 (329)
T 4apw_A 304 SIITNNSQWTTCEGLYKVAVA 324 (329)
T ss_dssp EECCSSGGGHHHHHHHHHHHH
T ss_pred CEecCCChhhHHHHHHHHHhh
Confidence 778889999999999987754
No 50
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=99.37 E-value=1.2e-12 Score=128.02 Aligned_cols=113 Identities=15% Similarity=0.279 Sum_probs=88.7
Q ss_pred cceeEEEeeecceeEEEEccCCCCCceeeeecCCCCCCceEEEEEEecc----eeEEEEEEecC-CCCCCccceeEEeec
Q psy7140 948 IRHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRAN----VFDVQAYYDCP-VPYPTQFVGQFIIKD 1022 (1304)
Q Consensus 948 ~~~~~~~d~~~~~i~i~~~~~~~~~~~~~l~~~~~~~p~~~~~~~~~~~----~~~i~~~~~~~-~~~~~~~i~~~~i~~ 1022 (1304)
++++.+.|++|++|||++.+ +...+||++|+++|++++.+|.+.. .+.|.+||++. .+.+|..||+|.|++
T Consensus 14 ~~d~~l~Dv~p~slGIe~~~----g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~I~VyqGe~~~~~~n~~Lg~f~l~g 89 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIETMG----GVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVTIHVLQGERKRAADNKSLGQFNLDG 89 (135)
T ss_dssp -------CCCSSCCCEEETT----TEECCSSCSSSCSSBCCEEEECCCSSSCSSCEEEEEECCSSSCSSSEEEEEEECCC
T ss_pred eCcEEEEEeecCcEEEEEEC----CEEEEEEcCCCeEeEeEeEEEEeccCCceEEEEEEEEeCCcccccCcEEEEEEEeC
Confidence 56889999999999999852 3455799999999999999997643 48999999987 778899999999999
Q ss_pred CCCCCCCCCceEEEEEEEccceEEEEEeeeeeecccccccceeeeecccc
Q psy7140 1023 IKPGPKGKPQKVKVKMTVNVHGVFSVTSASMFEDLEDQKEMFKCDLPYDS 1072 (1304)
Q Consensus 1023 i~~~~~~~~~~i~v~~~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~i~~ 1072 (1304)
++|+|+|.+ +|+|+|++|.||+|+|++.+. .+++...+.|..
T Consensus 90 ipp~p~G~~-~IeVtf~iD~nGiL~V~a~d~-------~tg~~~~i~i~~ 131 (135)
T 1q5l_A 90 INPAPRGMP-QIEVTFDIDADGILHVSAKDK-------NSGKEQKITIKA 131 (135)
T ss_dssp CCSCCSSSC-CEEEEEEECTTSEEEEEEEET-------TTCCEEEEEEEC
T ss_pred CCCCCCcee-EEEEEEEECCCCEEEEEEEEC-------CCCCEEEEEEec
Confidence 999999997 599999999999999998533 234555555544
No 51
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.29 E-value=4.1e-11 Score=142.86 Aligned_cols=112 Identities=17% Similarity=0.192 Sum_probs=82.1
Q ss_pred HHHHHHHHHHHHHHHhhhcC--ccc-eEEEeecCCCCHHHHHHHHHHH-HHcCCCeEEeechhHHHHHHhhhhcCCCCCC
Q psy7140 146 QLTAMLFTKLKDISENEIQN--KVH-DCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPED 221 (1304)
Q Consensus 146 el~~~~L~~lk~~a~~~~~~--~~~-~~vitVPa~~~~~qr~~l~~A~-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~ 221 (1304)
+.+..+++|+... .++. .-. .+++|.|.......|+.+.+.+ +..|++.+.++.+|.||+++++.
T Consensus 93 d~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re~~~eilFE~f~vpav~l~~~~vlalya~G~-------- 161 (498)
T 3qb0_A 93 DTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRKKSLEVLLEGMQFEACYLAPTSTCVSFAAGR-------- 161 (498)
T ss_dssp HHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHHHHHHHHHTTSCCSEEEEEEHHHHHHHHHTC--------
T ss_pred HHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHHHHHHHHHhhcCCCeEeecchHHHHHHHcCC--------
Confidence 4445566665432 2332 123 5899999999999999999975 78999999999999999988863
Q ss_pred CCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHH
Q psy7140 222 DQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYIS 275 (1304)
Q Consensus 222 ~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~ 275 (1304)
.. -||+|+|+|+|+++.+. +|..- ........+||+++|+.|.++|.
T Consensus 162 ---~t-glVVDiG~g~T~vvPI~--~G~~l-~~ai~rl~vgG~~lt~~L~~lL~ 208 (498)
T 3qb0_A 162 ---PN-CLVVDIGHDTCSVSPIV--DGMTL-SKSTRRNFIAGKFINHLIKKALE 208 (498)
T ss_dssp ---SS-EEEEEECSSCEEEEEEE--TTEEC-GGGCEEESCSHHHHHHHHHHHTT
T ss_pred ---Ce-EEEEEcCCCcEEEEEEe--CCEEc-cccceeccccHHHHHHHHHHHHH
Confidence 12 38999999999999864 45321 11112347999999999999985
No 52
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.28 E-value=2.3e-12 Score=152.48 Aligned_cols=244 Identities=12% Similarity=0.089 Sum_probs=147.3
Q ss_pred HHHHHHHHHHHHHHHhhhcCc--cceEEEeecCCCCHHHHHHHHHHH-HHcCCCeEEeechhHHHHHHhhhhcCCCCCCC
Q psy7140 146 QLTAMLFTKLKDISENEIQNK--VHDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDD 222 (1304)
Q Consensus 146 el~~~~L~~lk~~a~~~~~~~--~~~~vitVPa~~~~~qr~~l~~A~-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~ 222 (1304)
+....+++|+.. +.++.. -..+++|.|...+...|+.+.+.+ +..|++.+.++.+|.+|+++.+..... .
T Consensus 103 d~~e~iw~~~~~---~~L~v~~~~~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~----~ 175 (427)
T 3dwl_A 103 DHMERFWQQSLF---KYLRCEPEDHYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV----T 175 (427)
T ss_dssp HHHHHHHHHHHH---TTSCCCGGGCEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT----C
T ss_pred HHHHHHHHHHHh---HhhCCCCcCCcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc----c
Confidence 344455555432 233332 246899999999999999999987 789999999999999999887743210 0
Q ss_pred CCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHH
Q psy7140 223 QNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEK 302 (1304)
Q Consensus 223 ~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~ 302 (1304)
.....-||+|+|+|+|+++.+ .+|..- ........+||+++|+.|.+++..+... .. =.+.++.
T Consensus 176 ~~~~tglVVDiG~g~T~v~PV--~~G~~l-~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~~-------~~~~~~~ 239 (427)
T 3dwl_A 176 DRSLTGTVVDSGDGVTHIIPV--AEGYVI-GSSIKTMPLAGRDVTYFVQSLLRDRNEP------DS-------SLKTAER 239 (427)
T ss_dssp SCCCCEEEEEESSSCEEEEEE--ETTEEC-GGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHH
T ss_pred CCCceEEEEECCCCceEEEEE--ECCEEe-hhhheeccccHHHHHHHHHHHHHHcCCC------ch-------hHHHHHH
Confidence 112346899999999999986 444321 1111234799999999999887543211 00 0134555
Q ss_pred hhhccccCCce----------eeEEEee--e--cCCcceEEEEcHHHHH---HHHHHH------HHHHHHHHHHHHHhCC
Q psy7140 303 LKKQMSANSNK----------LPLNIEC--F--MDDKDVHAELKRNDLE---TLCEHI------FGRIEICLNKCIAESK 359 (1304)
Q Consensus 303 ~K~~Ls~~~~~----------~~~~i~~--~--~~~~~~~~~itr~~fe---~~~~~~------~~~i~~~i~~~l~~~~ 359 (1304)
+|+.++..... .+..+.. + .+|....++|..+.|. -++.|- ...|.+++.++|.+..
T Consensus 240 IKe~~cyv~~d~~~e~~~~~~~~~~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~ 319 (427)
T 3dwl_A 240 IKEECCYVCPDIVKEFSRFDREPDRYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSP 319 (427)
T ss_dssp HHHHHCCCCSCHHHHHHHTTC-----CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSC
T ss_pred HHHhcCcccCCHHHHHHHhhcCccccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCC
Confidence 66655432110 0000000 1 2334446677777763 233331 2347788888887643
Q ss_pred CC--CCcccEEEEEcCCCCchhHHHHHHHhcC----------------------CCCCCCCCchhHHHHHHHHHhhH
Q psy7140 360 LP--VNAIHSIEIVGGSSRIPAFKNVIESVFH----------------------KPPSTTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 360 ~~--~~~i~~ViLvGG~sr~p~v~~~l~~~f~----------------------~~~~~~~np~eaVa~Gaa~~aa~ 412 (1304)
.. ..-...|+|+||+|.+|.+.+.|++.+. .++..+.++..++=+|++++|..
T Consensus 320 ~dlr~~L~~nIvLtGG~sl~~G~~~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilasl 396 (427)
T 3dwl_A 320 IDVRKGLYKNIVLSGGSTLFKNFGNRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQT 396 (427)
T ss_dssp HHHHHHHHHCEEEESGGGCSTTTTHHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHHS
T ss_pred HHHHHHHhCCEEEEccCcCCCChHHHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeeccc
Confidence 21 1113569999999999999998886552 11123356778999999999863
No 53
>3dwl_A Actin-related protein 3; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.23 E-value=4.6e-12 Score=149.86 Aligned_cols=224 Identities=14% Similarity=0.141 Sum_probs=143.2
Q ss_pred ceEEEeecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEE
Q psy7140 697 HDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 775 (1304)
Q Consensus 697 ~~~VitVP~~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 775 (1304)
..+++|.|...+...|+++.+.+ +..|+..+.++.+|.+|+++.+..... .+....-||+|+|+|+|+++.+.
T Consensus 124 ~pvlltep~~~~~~~re~~~ei~FE~~~~p~v~l~~~~vla~~a~G~~~~~----~~~~~tglVVDiG~g~T~v~PV~-- 197 (427)
T 3dwl_A 124 HYFLLTEPPLNPPENRENTAEIMFESFNCAGLYIAVQAVLALAASWTSSKV----TDRSLTGTVVDSGDGVTHIIPVA-- 197 (427)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHTTTTCCSEEEEEEHHHHHHHGGGGSTTT----CSCCCCEEEEEESSSCEEEEEEE--
T ss_pred CcEEEEcCCCCCHHHHHHHHHHHHHhccCceeeecchHHHHHHhcCCcccc----cCCCceEEEEECCCCceEEEEEE--
Confidence 47999999999999999998887 789999999999999999887743210 01134589999999999999873
Q ss_pred CCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCcee----------ee
Q psy7140 776 KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKL----------PL 845 (1304)
Q Consensus 776 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~~----------~~ 845 (1304)
.|.. +........+||+++|+.|.+++..+... . .=...++.+|+.++.-.... +.
T Consensus 198 ~G~~-l~~~~~rl~~gG~~lt~~L~~lL~~~~~~------~-------~~~~~~~~IKe~~cyv~~d~~~e~~~~~~~~~ 263 (427)
T 3dwl_A 198 EGYV-IGSSIKTMPLAGRDVTYFVQSLLRDRNEP------D-------SSLKTAERIKEECCYVCPDIVKEFSRFDREPD 263 (427)
T ss_dssp TTEE-CGGGCEEESCCHHHHHHHHHHTTC---------------------CHHHHHHHHHHCCCCSCHHHHHHHTTC---
T ss_pred CCEE-ehhhheeccccHHHHHHHHHHHHHHcCCC------c-------hhHHHHHHHHHhcCcccCCHHHHHHHhhcCcc
Confidence 2321 11111223799999999999988654321 0 01245677888776421110 00
Q ss_pred EEee--e--cCCcceEEEecHHHH---HHHHHHH------HHHHHHHHHHHHHhcCCCC--CceeEEEEecCCCCChhHH
Q psy7140 846 NIEC--F--MDDKDVHAELKRNDL---ETLCEHI------FGRIEICLNKCIAESKLPV--NAIHSIEIVGGSSRIPAFK 910 (1304)
Q Consensus 846 ~ie~--l--~~~~d~~~~itr~ef---e~l~~~~------~~~i~~~i~~~l~~~~~~~--~~I~~V~LvGG~srip~v~ 910 (1304)
.+.. + .++....++|..+.| |-+++|- ...|.+.+.++|.+...+. .-...|+|+||+|.+|.+.
T Consensus 264 ~~~~~~l~~~~g~~~~i~ig~erf~~pE~LF~P~~~g~~~~~gI~~~i~~sI~~c~~dlr~~L~~nIvLtGG~sl~~G~~ 343 (427)
T 3dwl_A 264 RYLKYASESITGHSTTIDVGFERFLAPEIFFNPEIASSDFLTPLPELVDNVVQSSPIDVRKGLYKNIVLSGGSTLFKNFG 343 (427)
T ss_dssp --CCBCC---------CBCCTHHHHSGGGGTCGGGTCSSCCSCHHHHHHHHHHTSCHHHHHHHHHCEEEESGGGCSTTTT
T ss_pred ccceeEeeCCCCCeeEEEEChHhhhChhhccCchhcCCccCCCccHHHHHHHHhCCHHHHHHHhCCEEEEccCcCCCChH
Confidence 0000 1 223334556777766 3344441 2357788888887654321 1246799999999999999
Q ss_pred HHHHHHcC----------------------CCCCCCCCchhHHHhHHHHHhh
Q psy7140 911 NVIESVFH----------------------KPPSTTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 911 ~~l~~~fg----------------------~~~~~~~n~~eava~Gaa~~aa 940 (1304)
++|.+.+. .++..+.++..++=.|++++|.
T Consensus 344 ~RL~~El~~l~~~~~~~~~~~~~~~p~~~~vkv~~~~~r~~s~WiGGSilas 395 (427)
T 3dwl_A 344 NRLQRDLKRIVDERIHRSEMLSGAKSGGVDVNVISHKRQRNAVWFGGSLLAQ 395 (427)
T ss_dssp HHHHHHHHHHHTTC-------------CCCCCEECCTTCTTHHHHHHHHHHH
T ss_pred HHHHHHHHHhhhhhccccccccccCCCceeEEEecCCccccceecCceeecc
Confidence 99887651 1122335677899999999986
No 54
>3qb0_A Actin-related protein 4; actin fold, ATP binding, nucleus, structural protein; HET: ATP; 3.40A {Saccharomyces cerevisiae}
Probab=99.21 E-value=7.2e-11 Score=140.72 Aligned_cols=178 Identities=17% Similarity=0.171 Sum_probs=114.6
Q ss_pred eEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCC----ceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCC
Q psy7140 561 SVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDK----NRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDD 636 (1304)
Q Consensus 561 ~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~----~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~ 636 (1304)
..|+||+||.++++++...+.+. ..+||+|+.... ..+||.++.... +. ...+
T Consensus 24 ~~iVID~GS~~~kaG~ag~~~P~--------~v~PSvVg~~~~~~~~~~~vG~e~~~~~---r~--~l~l---------- 80 (498)
T 3qb0_A 24 SAVVIDPGSYTTNIGYSGSDFPQ--------SILPSVYGKYTADEGNKKIFSEQSIGIP---RK--DYEL---------- 80 (498)
T ss_dssp SCEEEECCSSEEEEEETTCSSCS--------EEEESEEEEESSCSSCCEECCTTGGGSC---CT--TEEE----------
T ss_pred CeEEEECCCcEEEEEECCCCCee--------eecCceeEEeccCCCccEEEecHHHhcC---cC--ceEE----------
Confidence 57899999999999987555332 246999987532 456676532210 00 0000
Q ss_pred hhHHHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhhcc--ccc-eEEEeecCCCCHHHHH
Q psy7140 637 PFVQEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEIQN--KVH-DCVLAVPSYFTNNERK 713 (1304)
Q Consensus 637 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~~~--~~~-~~VitVP~~f~~~qr~ 713 (1304)
..|+ .+|. ... =+....+++|+... .++. .-. .+++|.|.......|+
T Consensus 81 --------~~Pi-----~~Gv------------I~d-wd~~E~iw~~~f~~---~L~v~p~~~~pvlltep~~n~~~~Re 131 (498)
T 3qb0_A 81 --------KPII-----ENGL------------VID-WDTAQEQWQWALQN---ELYLNSNSGIPALLTEPVWNSTENRK 131 (498)
T ss_dssp --------EESE-----ETTE------------ESC-HHHHHHHHHHHHHH---TSCCSCCTTCCEEEEECTTCCHHHHH
T ss_pred --------eccC-----cCCE------------Ecc-HHHHHHHHHHHHHh---hhCCCcccCCceEEEeCCCCcHHHHH
Confidence 0111 1111 111 23334445444321 2331 123 6899999999999999
Q ss_pred HHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCc
Q psy7140 714 ALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGG 792 (1304)
Q Consensus 714 ~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG 792 (1304)
++.+.+ +..|+..+.++.+|.||++++|. . .-||+|+|+|+|+++.+. .|.. +........+||
T Consensus 132 ~~~eilFE~f~vpav~l~~~~vlalya~G~-----------~-tglVVDiG~g~T~vvPI~--~G~~-l~~ai~rl~vgG 196 (498)
T 3qb0_A 132 KSLEVLLEGMQFEACYLAPTSTCVSFAAGR-----------P-NCLVVDIGHDTCSVSPIV--DGMT-LSKSTRRNFIAG 196 (498)
T ss_dssp HHHHHHHTTSCCSEEEEEEHHHHHHHHHTC-----------S-SEEEEEECSSCEEEEEEE--TTEE-CGGGCEEESCSH
T ss_pred HHHHHHHhhcCCCeEeecchHHHHHHHcCC-----------C-eEEEEEcCCCcEEEEEEe--CCEE-ccccceeccccH
Confidence 999865 88999999999999999988864 1 248999999999999874 3321 111112247999
Q ss_pred HHHHHHHHHHHHH
Q psy7140 793 RNIDKILAEYIST 805 (1304)
Q Consensus 793 ~~~D~~l~~~l~~ 805 (1304)
+++|+.|.++|..
T Consensus 197 ~~lt~~L~~lL~~ 209 (498)
T 3qb0_A 197 KFINHLIKKALEP 209 (498)
T ss_dssp HHHHHHHHHHTTT
T ss_pred HHHHHHHHHHHHh
Confidence 9999999999854
No 55
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=99.15 E-value=1.4e-10 Score=110.31 Aligned_cols=82 Identities=21% Similarity=0.399 Sum_probs=76.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHHhc-chhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHH
Q psy7140 1099 QEKDRVDAKNALEEYVYELRDGLA-NDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMR 1177 (1304)
Q Consensus 1099 ~~~~~~~akN~LEs~iy~~r~~L~-~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R 1177 (1304)
++|++.++||.||+|||.+|..|. +.+.+++++++++.|...|+++++||+++ .+++.++|++++++|+.++.||..|
T Consensus 3 ~~re~ieakN~lEs~iy~~e~~l~e~~~~~kl~~eek~~i~~~i~e~~~wL~~~-~~a~~e~i~~k~~eL~~~~~~i~~k 81 (113)
T 3lof_A 3 AAAERVSAKNALESYAFNMKSAVEDEGLKGKISEADKKKVLDKCQEVISWLDAN-TLAEKDEFEHKRKELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCGGGBTTBCHHHHHHHHHHHHHHHHHHHHC-TTCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHH
Confidence 568899999999999999999997 35889999999999999999999999975 6789999999999999999999999
Q ss_pred HHhh
Q psy7140 1178 AMEY 1181 (1304)
Q Consensus 1178 ~~e~ 1181 (1304)
+++.
T Consensus 82 ~y~~ 85 (113)
T 3lof_A 82 LYQG 85 (113)
T ss_dssp HHHC
T ss_pred HHHh
Confidence 9874
No 56
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.14 E-value=6.1e-11 Score=136.59 Aligned_cols=196 Identities=15% Similarity=0.150 Sum_probs=130.8
Q ss_pred HHHHHHHHHHHHc-CC--CeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEec
Q psy7140 181 NERKALLTAASIA-GL--NVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVC 257 (1304)
Q Consensus 181 ~qr~~l~~A~~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~ 257 (1304)
.+-+.+.+|.+.+ |+ ++-. -||.||+++..... +++..++++|+||||||+|+ |.++.+....+-
T Consensus 368 ~~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTeD-------E~eLGvaiIDmGGGTTd~sV--f~~G~lv~a~~i- 435 (610)
T 2d0o_A 368 LQMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTTP-------GTTRPLAILDLGAGSTDASI--INPKGDIIATHL- 435 (610)
T ss_dssp CCHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTST-------TCCSSEEEEEECSSEEEEEE--ECTTCCEEEEEE-
T ss_pred HHHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-------CCcCCeEEEEeCCCcceEEE--EcCCcEEEEEEe-
Confidence 3478899999999 99 7666 99999999885432 34566899999999999999 445555444433
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCC---------ceeeEEE--eeecC---
Q psy7140 258 DSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANS---------NKLPLNI--ECFMD--- 323 (1304)
Q Consensus 258 ~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~---------~~~~~~i--~~~~~--- 323 (1304)
..||++++..|..-|. .+. +..||++|+ ..... +.-.+.+ +.+..
T Consensus 436 --p~gG~~VT~DIA~~Lg--------t~d----------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~ 494 (610)
T 2d0o_A 436 --AGAGDMVTMIIARELG--------LED----------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVF 494 (610)
T ss_dssp --ECSHHHHHHHHHHHHT--------CCC----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGT
T ss_pred --ccchHHHHHHHHHHhC--------CCC----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCccee
Confidence 7999999999987652 210 256788888 43211 1112233 11110
Q ss_pred Cc------ceEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHhCCC-----CCCcccEEEEEcCCCCchhHHHHHHHhc
Q psy7140 324 DK------DVHAELKRND--LETLCEHIFGRIEIC--LNKCIAESKL-----PVNAIHSIEIVGGSSRIPAFKNVIESVF 388 (1304)
Q Consensus 324 ~~------~~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~sr~p~v~~~l~~~f 388 (1304)
.. ..-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++.++.|
T Consensus 495 ~Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL 572 (610)
T 2d0o_A 495 ARVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDAL 572 (610)
T ss_dssp TCEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHT
T ss_pred eeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHh
Confidence 01 112245 555 666 55554444433 2233443322 3567899999999999999999999999
Q ss_pred CC-CCC-------CCCCchhHHHHHHHHHhh
Q psy7140 389 HK-PPS-------TTLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 389 ~~-~~~-------~~~np~eaVa~Gaa~~aa 411 (1304)
+. .++ ..-+|..|+|.|+.++-+
T Consensus 573 ~~y~VRiGrP~~~gv~gP~fAtAvGLlly~~ 603 (610)
T 2d0o_A 573 AHYRLVAGRGNIRGSEGPRNAVATGLILSWH 603 (610)
T ss_dssp TTSSCEEEECCGGGTSTTSCHHHHHHHHHHH
T ss_pred CcCCeEEecCCccccCCCcHHHHHHHHHHHh
Confidence 86 432 245999999999998764
No 57
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.07 E-value=1.4e-10 Score=134.24 Aligned_cols=193 Identities=16% Similarity=0.148 Sum_probs=128.6
Q ss_pred HHHHHHHHHHc-CC--CeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCC
Q psy7140 183 RKALLTAASIA-GL--NVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDS 259 (1304)
Q Consensus 183 r~~l~~A~~~A-Gl--~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~ 259 (1304)
-+.+.+|.+.+ |+ ++-. -||.||+++..... +++..++++|+||||||+|++ .++.+....+-
T Consensus 372 m~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTed-------E~elGvaiIDmGgGTTd~sVf--~~g~lv~a~~i--- 437 (607)
T 1nbw_A 372 MQVIARELSARLQTEVVVGG--VEANMAIAGALTTP-------GCAAPLAILDLGAGSTDAAIV--NAEGQITAVHL--- 437 (607)
T ss_dssp SCCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTST-------TCCSSEEEEEECSSEEEEEEE--CSSSCEEEEEE---
T ss_pred HHHHHHHHHhccCCcceecc--ccHHHhhhhhcCCC-------CCcCCeEEEEeCCCcceEEEE--cCCcEEEEEEe---
Confidence 56688889999 99 6655 99999999885432 345668999999999999994 45554444333
Q ss_pred CcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCC---------ceeeEEE--eeecC---Cc
Q psy7140 260 EIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANS---------NKLPLNI--ECFMD---DK 325 (1304)
Q Consensus 260 ~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~---------~~~~~~i--~~~~~---~~ 325 (1304)
..||++++..|..-|. .+. +..||++|+ ..... +.-.+.+ +.+.. ..
T Consensus 438 p~gG~~VT~DIA~~Lg--------~~d----------~~~AErIK~-YG~A~~e~lf~~~dede~Iev~~~~lgp~~~~R 498 (607)
T 1nbw_A 438 AGAGNMVSLLIKTELG--------LED----------LSLAEAIKK-YPLAKVESLFSIRHENGAVEFFREALSPAVFAK 498 (607)
T ss_dssp ECCHHHHHHHHHHHHT--------CSC----------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTTC
T ss_pred ccchHHHHHHHHHHhC--------CCC----------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceeee
Confidence 7999999999987652 110 256788888 43211 1112233 11110 01
Q ss_pred ------ceEEEEcHHH--HHHHHHHHHHHHHHH--HHHHHHhCCC-----CCCcccEEEEEcCCCCchhHHHHHHHhcCC
Q psy7140 326 ------DVHAELKRND--LETLCEHIFGRIEIC--LNKCIAESKL-----PVNAIHSIEIVGGSSRIPAFKNVIESVFHK 390 (1304)
Q Consensus 326 ------~~~~~itr~~--fe~~~~~~~~~i~~~--i~~~l~~~~~-----~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~ 390 (1304)
..-..| +.+ +|+ ++-+-+++.+. +..+|+..+. +..+|..|+|+||+|.++.+.++.++.|+.
T Consensus 499 ~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~gI~elA~~iL~~ 576 (607)
T 1nbw_A 499 VVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLDFEIPQLITEALSH 576 (607)
T ss_dssp EEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGSSSHHHHHHHHHHT
T ss_pred eecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhcccHHHHHHHHhCc
Confidence 112245 555 666 55554444433 3444665544 345779999999999999999999999986
Q ss_pred -CCC-------CCCCchhHHHHHHHHHh
Q psy7140 391 -PPS-------TTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 391 -~~~-------~~~np~eaVa~Gaa~~a 410 (1304)
.++ ..-+|..|+|.|+.++-
T Consensus 577 ~~VRiGrP~~~g~~gP~fAtAvGLlly~ 604 (607)
T 1nbw_A 577 YGVVAGQGNIRGTEGPRNAVATGLLLAG 604 (607)
T ss_dssp TTCEEEECCGGGTSCSCCHHHHHHHHHH
T ss_pred CCeEEecCCccccCCchHHHHHHHHHhh
Confidence 432 24599999999999864
No 58
>2d0o_A DIOL dehydratase-reactivating factor large subunit; chaperone; HET: ADP; 2.00A {Klebsiella oxytoca} SCOP: c.8.6.1 c.55.1.6 c.55.1.6 PDB: 2d0p_A
Probab=99.05 E-value=2.6e-10 Score=131.38 Aligned_cols=196 Identities=15% Similarity=0.135 Sum_probs=131.3
Q ss_pred HHHHHHHHHHHc-CC--ceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecC
Q psy7140 711 ERKALLTAASIA-GL--NVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCD 787 (1304)
Q Consensus 711 qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~ 787 (1304)
+-+.+.+|.+.+ |+ .+-. .||.||+++.... .+++..++++||||||||+|++. ++.+....+
T Consensus 369 ~m~NI~~cVer~~gL~veV~g--~ep~AAglaaLTe-------DE~eLGvaiIDmGGGTTd~sVf~--~G~lv~a~~--- 434 (610)
T 2d0o_A 369 QMAMIAREIEQKLNIDVQIGG--AEAEAAILGALTT-------PGTTRPLAILDLGAGSTDASIIN--PKGDIIATH--- 434 (610)
T ss_dssp CHHHHHHHHHHHHCCEEEEEE--EHHHHHHHHHTTS-------TTCCSSEEEEEECSSEEEEEEEC--TTCCEEEEE---
T ss_pred HHHHHHHHHHhccCCcceecc--ccHHHhhhhhcCC-------CCCcCCeEEEEeCCCcceEEEEc--CCcEEEEEE---
Confidence 357788888888 99 6666 9999999987542 35667799999999999999964 443333322
Q ss_pred CCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCce---------eeeEE--eeecC---C
Q psy7140 788 SEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNK---------LPLNI--ECFMD---D 853 (1304)
Q Consensus 788 ~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~---------~~~~i--e~l~~---~ 853 (1304)
...||+.++..|+.-|.-. . +..||++|+ +.....+ -.+.+ +.+.. .
T Consensus 435 ip~gG~~VT~DIA~~Lgt~----------d--------~~~AErIK~-YG~A~ve~lf~~~dede~Iev~~~~lgp~~~~ 495 (610)
T 2d0o_A 435 LAGAGDMVTMIIARELGLE----------D--------RYLAEEIKK-YPLAKVESLFHLRHEDGSVQFFSTPLPPAVFA 495 (610)
T ss_dssp EECSHHHHHHHHHHHHTCC----------C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEEECSSCCCGGGTT
T ss_pred eccchHHHHHHHHHHhCCC----------C--------HHHHHHhcc-cCceeecccccccCCCCeEEEecCCCCcceee
Confidence 3689999999998776332 0 256899999 6431111 12222 11110 0
Q ss_pred c------ceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHhcCC-----CCCceeEEEEecCCCCChhHHHHHHHHcC
Q psy7140 854 K------DVHAELKRND--LETLCEHIFGRIEIC--LNKCIAESKL-----PVNAIHSIEIVGGSSRIPAFKNVIESVFH 918 (1304)
Q Consensus 854 ~------d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~I~~V~LvGG~srip~v~~~l~~~fg 918 (1304)
. +--..| +.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.++.+.++..+.|+
T Consensus 496 Rv~~~~~~~L~~I-~pR~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql~GI~ElA~~iL~ 573 (610)
T 2d0o_A 496 RVCVVKADELVPL-PGDLALEK-VRAIRRSAKERVFVTNALRALRQVSPTGNIRDIPFVVLVGGSSLDFEVPQLVTDALA 573 (610)
T ss_dssp CEEEECSSCEEEC-CTTCCHHH-HHHHHHHHHHHHHHHHHHHHHHHHSSSSCGGGCCEEEEESGGGGCSSHHHHHHHHTT
T ss_pred eeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCccCCCcccccCCEEEeCchhhcccHHHHHHHHhC
Confidence 1 111245 556 666 55555554443 2333444322 35678999999999999999999999998
Q ss_pred C-CCC-------CCCCchhHHHhHHHHHhhH
Q psy7140 919 K-PPS-------TTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 919 ~-~~~-------~~~n~~eava~Gaa~~aa~ 941 (1304)
. ++. ..-+|..|+|.|.+++.+.
T Consensus 574 ~y~VRiGrP~~~gv~gP~fAtAvGLlly~~~ 604 (610)
T 2d0o_A 574 HYRLVAGRGNIRGSEGPRNAVATGLILSWHK 604 (610)
T ss_dssp TSSCEEEECCGGGTSTTSCHHHHHHHHHHHH
T ss_pred cCCeEEecCCccccCCCcHHHHHHHHHHHhh
Confidence 7 432 2458999999999987653
No 59
>1nbw_A Glycerol dehydratase reactivase alpha subunit; molecular chaperone, actin-like ATPase domain, beta/BETA/alpha swiveling domain, hydrolase; 2.40A {Klebsiella pneumoniae} SCOP: c.8.6.1 c.55.1.6 c.55.1.6
Probab=99.00 E-value=2.6e-10 Score=132.05 Aligned_cols=203 Identities=15% Similarity=0.129 Sum_probs=132.8
Q ss_pred EEEeecCCCCHHHHHHHHHHHHHc-CC--ceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEE
Q psy7140 699 CVLAVPSYFTNNERKALLTAASIA-GL--NVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 775 (1304)
Q Consensus 699 ~VitVP~~f~~~qr~~l~~Aa~~A-Gl--~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 775 (1304)
.+|+....+- +.+.+|.+.+ |+ .+-. .||.||+++.... .+++..++++||||||||+|++.
T Consensus 363 hmVt~~~~~m----~NI~~~Ver~~gL~veV~g--~ep~AA~laaLTe-------dE~elGvaiIDmGgGTTd~sVf~-- 427 (607)
T 1nbw_A 363 AMVKADRLQM----QVIARELSARLQTEVVVGG--VEANMAIAGALTT-------PGCAAPLAILDLGAGSTDAAIVN-- 427 (607)
T ss_dssp EEEECCCCCS----CCHHHHHHHHHTSEEEECS--CHHHHHHHHHTTS-------TTCCSSEEEEEECSSEEEEEEEC--
T ss_pred heeecCHHHH----HHHHHHHHhccCCcceecc--ccHHHhhhhhcCC-------CCCcCCeEEEEeCCCcceEEEEc--
Confidence 3444444443 4566777777 88 6655 8999999987542 35667799999999999999965
Q ss_pred CCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHhccCCce---------eeeE
Q psy7140 776 KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNK---------LPLN 846 (1304)
Q Consensus 776 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~rL~~~ae~~K~~Ls~~~~~---------~~~~ 846 (1304)
++.+.... ....||+.++..|+.-|.-. . +..||++|+ +.....+ -.+.
T Consensus 428 ~g~lv~a~---~ip~gG~~VT~DIA~~Lg~~----------d--------~~~AErIK~-YG~A~~e~lf~~~dede~Ie 485 (607)
T 1nbw_A 428 AEGQITAV---HLAGAGNMVSLLIKTELGLE----------D--------LSLAEAIKK-YPLAKVESLFSIRHENGAVE 485 (607)
T ss_dssp SSSCEEEE---EEECCHHHHHHHHHHHHTCS----------C--------HHHHHHHHH-SCEEEECSSSEEEETTSCEE
T ss_pred CCcEEEEE---EeccchHHHHHHHHHHhCCC----------C--------HHHHHHhcc-cCceeecccccccCCCCeEE
Confidence 33332222 23689999999998776432 0 256899999 6431111 1222
Q ss_pred E--eeecC---Cc------ceEEEecHHH--HHHHHHHHHHHHHHH--HHHHHHhcCC-----CCCceeEEEEecCCCCC
Q psy7140 847 I--ECFMD---DK------DVHAELKRND--LETLCEHIFGRIEIC--LNKCIAESKL-----PVNAIHSIEIVGGSSRI 906 (1304)
Q Consensus 847 i--e~l~~---~~------d~~~~itr~e--fe~l~~~~~~~i~~~--i~~~l~~~~~-----~~~~I~~V~LvGG~sri 906 (1304)
+ +.+.. .. +--..| +.. +|+ ++-+-+++.+. +..+|+..+. ...+|..|+|+||+|.+
T Consensus 486 v~~~~lgp~~~~R~~~~~~~~L~~I-~~R~~vEE-lelVR~~ak~~vfv~n~Lralg~~~~~g~~r~i~~VVLTGGsSql 563 (607)
T 1nbw_A 486 FFREALSPAVFAKVVYIKEGELVPI-DNASPLEK-IRLVRRQAKEKVFVTNCLRALRQVSPGGSIRDIAFVVLVGGSSLD 563 (607)
T ss_dssp ECSSCCCGGGTTCEEEEETTEEEEE-CCSSCHHH-HHHHHHHHHHHHHHHHHHHHHSSSSTTCCSTTCCEEEEESGGGGS
T ss_pred EecCCCCcceeeeeecccccceeee-CCCcchHH-HHHHHHHHhhhhhhHHHHHhcCCcccCCcccccCCEEEeCchhhc
Confidence 2 11110 01 111245 555 666 55555555443 3445776554 24567999999999999
Q ss_pred hhHHHHHHHHcCC-CC-------CCCCCchhHHHhHHHHHhh
Q psy7140 907 PAFKNVIESVFHK-PP-------STTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 907 p~v~~~l~~~fg~-~~-------~~~~n~~eava~Gaa~~aa 940 (1304)
+.+.++..+.|+. ++ ...-+|..|+|.|.+++.+
T Consensus 564 ~gI~elA~~iL~~~~VRiGrP~~~g~~gP~fAtAvGLlly~~ 605 (607)
T 1nbw_A 564 FEIPQLITEALSHYGVVAGQGNIRGTEGPRNAVATGLLLAGQ 605 (607)
T ss_dssp SSHHHHHHHHHHTTTCEEEECCGGGTSCSCCHHHHHHHHHHH
T ss_pred ccHHHHHHHHhCcCCeEEecCCccccCCchHHHHHHHHHhhh
Confidence 9999999999976 43 1245899999999997643
No 60
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=98.97 E-value=6.7e-10 Score=110.76 Aligned_cols=79 Identities=19% Similarity=0.197 Sum_probs=57.1
Q ss_pred eeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCceeEE
Q psy7140 424 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQF 503 (1304)
Q Consensus 424 ~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~ 503 (1304)
++||+|||||+.+ .||.+.++|++++.+|+..++.|+++.|+|..+ .+.+ ++||+.++.+|..||+|
T Consensus 2 ~~Dv~p~slGie~--~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v----~I~V-------yqGe~~~~~dn~~LG~f 68 (152)
T 3dob_A 2 NADVAPLSLGIET--AGGVMTNLIDRNTRIPTKACKTFTTYADNQPGV----SIQV-------YEGERAMTRDNHRLGTF 68 (152)
T ss_dssp --CBCSSCEEEEE--TTTEEEEEECTTCBSSEEEEEEEEESSTTCCEE----EEEE-------EESSCSBGGGSEEEEEE
T ss_pred ceeeecceEEEEE--cCCEEEEEEECcCccCEEEEEEEEECCCCceEE----EEEE-------EEcCccccccCceeEEE
Confidence 5789988887765 688888877766666665555566666665444 4443 45677888999999999
Q ss_pred EEcCCCCCCCcc
Q psy7140 504 IIKDIKPRTSRQ 515 (1304)
Q Consensus 504 ~i~~i~~~~~g~ 515 (1304)
.|+||||.|+|.
T Consensus 69 ~l~gipp~p~G~ 80 (152)
T 3dob_A 69 ELSGIPPAPRGV 80 (152)
T ss_dssp EEECCCCCCTTC
T ss_pred EEeCCCCCCCCC
Confidence 999999999764
No 61
>3dqg_A Heat shock 70 kDa protein F; structural genomics, APC90008.12, HSP70 protein, peptide-BIN domain, PSI-2, protein structure initiative; 1.72A {Caenorhabditis elegans}
Probab=98.97 E-value=6.6e-10 Score=110.66 Aligned_cols=79 Identities=18% Similarity=0.215 Sum_probs=57.3
Q ss_pred eeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCceeEE
Q psy7140 424 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQF 503 (1304)
Q Consensus 424 ~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~ 503 (1304)
++||+||+||+.+ .||.+.++|++++.+|+..++.|++..|||..+ .+.+ ++||+.++.+|..||+|
T Consensus 2 ~~DV~p~slGie~--~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v----~i~V-------yqGe~~~~~dn~~LG~f 68 (151)
T 3dqg_A 2 NADVTPLSLGIET--LGGIMTKLITRNTTIPTKKSQVFSTAADGQTQV----QIKV-------FQGEREMATSNKLLGQF 68 (151)
T ss_dssp --CBCSSCEEEEE--TTTEEEEEECTTCBSSEEEEEEEEESSTTCCEE----EEEE-------EESSCSBGGGSEEEEEE
T ss_pred cceeeeeEEEEEE--cCCEEEEEEECcCccCEEEEEEEEECCCCcceE----EEEE-------EEcCCcccccCcEEEEE
Confidence 5789988887766 688888877776666665556566666665444 4443 45677888999999999
Q ss_pred EEcCCCCCCCcc
Q psy7140 504 IIKDIKPRTSRQ 515 (1304)
Q Consensus 504 ~i~~i~~~~~g~ 515 (1304)
.|.||||.|+|.
T Consensus 69 ~l~gipp~p~G~ 80 (151)
T 3dqg_A 69 SLVGIPPAPRGV 80 (151)
T ss_dssp EEECCCCCCTTC
T ss_pred EEeCCCCCCCCC
Confidence 999999999764
No 62
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.92 E-value=5.5e-08 Score=121.71 Aligned_cols=108 Identities=15% Similarity=0.290 Sum_probs=79.4
Q ss_pred HHHHHH-HhhhcCccc-----eEEEeecCCCCHHHHHHHHHHH-HHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCc
Q psy7140 154 KLKDIS-ENEIQNKVH-----DCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPR 226 (1304)
Q Consensus 154 ~lk~~a-~~~~~~~~~-----~~vitVPa~~~~~qr~~l~~A~-~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~ 226 (1304)
.|++++ .+.|+.... .+++|.|..++...|+.|.+.+ +..|++.+.++.++.+|++++|. .
T Consensus 179 ~iw~~~~~~~L~i~~~d~~~~pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~------------~ 246 (593)
T 4fo0_A 179 VIWSHAIQKYLEIPLKDLKYYRCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL------------S 246 (593)
T ss_dssp HHHHHHHHHTSCCCGGGGGGCEEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC------------S
T ss_pred HHHHHHHHHhcCCCchhccCCcEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC------------C
Confidence 344444 345665443 3999999999999999888775 56799999999999999988863 2
Q ss_pred EEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcccHHHHHHHHHHHHH
Q psy7140 227 YVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGRNIDKILAEYIST 276 (1304)
Q Consensus 227 ~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 276 (1304)
.-||||+|.++|.|+- +.+|..- ........+||+++++.|.++|..
T Consensus 247 tglVVDiG~~~T~v~P--V~dG~~l-~~~~~rl~~GG~~lt~~L~~lL~~ 293 (593)
T 4fo0_A 247 STCIVDVGDQKTSVCC--VEDGVSH-RNTRLCLAYGGSDVSRCFYWLMQR 293 (593)
T ss_dssp EEEEEEECSSCEEEEE--EESSCBC-GGGCEEESCCHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCceeeee--eECCEEe-hhheEEecccHHHHHHHHHHHHHh
Confidence 3589999999998776 4445321 111123479999999999988853
No 63
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=98.92 E-value=8.7e-10 Score=110.15 Aligned_cols=79 Identities=15% Similarity=0.166 Sum_probs=55.6
Q ss_pred eeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCceeEE
Q psy7140 424 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQF 503 (1304)
Q Consensus 424 ~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~ 503 (1304)
+.||+||+||+.+ .||.+.++|++++.+|+..++.|++..|+|..+ .+.+ ++||+.++.+|..||+|
T Consensus 2 ~~Dv~p~slGi~~--~gg~~~~lI~rnt~iP~~k~~~f~t~~d~Q~~v----~i~V-------yqGe~~~~~dn~~LG~f 68 (152)
T 3h0x_A 2 NADVNALTLGIET--TGGVMTPLIKRNTAIPTKKSQIFSTAVDNQPTV----MIKV-------YEGERAMSKDNNLLGKF 68 (152)
T ss_dssp -CCBCSSCEEEEE--TTTEEEEEECTTCBSSEEEEEEECCSSTTCCCE----EEEE-------EESSCSBGGGSEEEEEE
T ss_pred ccceeccEEEEEE--cCCEEEEEEECcCccCEEEEEEEEeCCCCccee----eeeE-------EEcCccccccCcEEEEE
Confidence 5789988887765 688887777666655554444444445554443 4443 45677888999999999
Q ss_pred EEcCCCCCCCcc
Q psy7140 504 IIKDIKPRTSRQ 515 (1304)
Q Consensus 504 ~i~~i~~~~~g~ 515 (1304)
.|+||||.|+|.
T Consensus 69 ~l~gipp~p~G~ 80 (152)
T 3h0x_A 69 ELTGIPPAPRGV 80 (152)
T ss_dssp EECCCCCCCTTC
T ss_pred EEeCCCCCCCCC
Confidence 999999999764
No 64
>4fo0_A Actin-related protein 8; chromatin remodeling, nucleosomes, NU gene regulation; HET: ATP; 2.60A {Homo sapiens}
Probab=98.89 E-value=8.8e-08 Score=119.84 Aligned_cols=120 Identities=15% Similarity=0.272 Sum_probs=84.3
Q ss_pred eEEEeecCCCCHHHHHHHHHH-HHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEEC
Q psy7140 698 DCVLAVPSYFTNNERKALLTA-ASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVK 776 (1304)
Q Consensus 698 ~~VitVP~~f~~~qr~~l~~A-a~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~ 776 (1304)
.+++|.|..++...|+.|.+. .+..|+..+.++.++.+|++++|. .+-+|||+|++.|.|+-|. +
T Consensus 200 pvlltep~~~~~~~re~~~eilFE~f~~pa~~~~~~~vla~ya~G~------------~tglVVDiG~~~T~v~PV~--d 265 (593)
T 4fo0_A 200 RCILLIPDIYNKQHVKELVNMILMKMGFSGIVVHQESVCATYGSGL------------SSTCIVDVGDQKTSVCCVE--D 265 (593)
T ss_dssp EEEEEECSSCCHHHHHHHHHHHHHTTCCSEEEEEEHHHHHHHHHTC------------SEEEEEEECSSCEEEEEEE--S
T ss_pred cEEEEeCCCCCHHHHHHHHHHHHHhcCCCeEEeechHHHHHHHCCC------------CceEEEEeCCCceeeeeeE--C
Confidence 499999999999999998776 467799999999999999988864 3578999999999988763 2
Q ss_pred CeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHhcc
Q psy7140 777 GKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKI-DPRTNARAYIRLLSEIEKLKKQMSA 838 (1304)
Q Consensus 777 ~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~-~~~~~~~~~~rL~~~ae~~K~~Ls~ 838 (1304)
|.. +........+||+++++.|.++|...- +.. +.......- +..++.+|+.++.
T Consensus 266 G~~-l~~~~~rl~~GG~~lt~~L~~lL~~~~---~~~~~~~~~~~~d---~~~v~~iKe~~c~ 321 (593)
T 4fo0_A 266 GVS-HRNTRLCLAYGGSDVSRCFYWLMQRAG---FPYRECQLTNKMD---CLLLQHLKETFCH 321 (593)
T ss_dssp SCB-CGGGCEEESCCHHHHHHHHHHHHHHTT---CSCTTCCTTCHHH---HHHHHHHHHHHCB
T ss_pred CEE-ehhheEEecccHHHHHHHHHHHHHhcC---CCccccccccchh---HHHHHHHHHHhcc
Confidence 211 111112237999999999999886531 111 111111111 2346788888764
No 65
>4e81_A Chaperone protein DNAK; chaperone; 1.90A {Escherichia coli} PDB: 3dpp_A* 3dpq_A* 3qnj_A 3dpo_A 1dkz_A 1dky_A 1dkx_A 1bpr_A 2bpr_A 1dg4_A
Probab=98.88 E-value=2.5e-09 Score=113.67 Aligned_cols=79 Identities=20% Similarity=0.210 Sum_probs=60.0
Q ss_pred EeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCceeE
Q psy7140 423 DVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQ 502 (1304)
Q Consensus 423 ~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~ 502 (1304)
.++||+||++|+.+ .||.+.++|++++.+|+..++.|++..|||..+ .+.+ ++||+.++.+|..||+
T Consensus 2 ~l~DV~p~slGie~--~gg~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v----~I~V-------yqGe~~~~~dn~~Lg~ 68 (219)
T 4e81_A 2 LLLDVTPLSLGIET--MGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAV----TIHV-------LQGERKRAADNKSLGQ 68 (219)
T ss_dssp CCCCBCSSCEEEEE--TTTEEEEEECTTCBSSEEEEEEEEESSTTCCEE----EEEE-------EESSCSBGGGSEEEEE
T ss_pred eEEEecCcEEEEEE--eCCEEEEEEeCcCcccEeEEEEEEeCCCCCceE----EEEE-------EEcCCcccccCCEEEE
Confidence 46789877777654 688888888777766666666666666775554 4443 4577888899999999
Q ss_pred EEEcCCCCCCCc
Q psy7140 503 FIIKDIKPRTSR 514 (1304)
Q Consensus 503 ~~i~~i~~~~~g 514 (1304)
|.|.||||.|+|
T Consensus 69 f~l~gipp~p~G 80 (219)
T 4e81_A 69 FNLDGINPAPRG 80 (219)
T ss_dssp EEEECCCCCSTT
T ss_pred EEEeCCCCCCCC
Confidence 999999999966
No 66
>3n8e_A Stress-70 protein, mitochondrial; beta-sandwich, helix, substrate binding domain, structural G consortium, SGC, chaperone; 2.80A {Homo sapiens}
Probab=98.87 E-value=1.5e-09 Score=111.20 Aligned_cols=82 Identities=18% Similarity=0.233 Sum_probs=54.4
Q ss_pred eeEeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCce
Q psy7140 421 HFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFV 500 (1304)
Q Consensus 421 ~~~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~l 500 (1304)
.+.+.||+||+||+.+ .||.+.++|++++.+|+..++.|++..|+|..+ .+.+ ++||+.++.+|..|
T Consensus 19 ~f~l~DV~P~slGie~--~gg~~~~lI~rnt~iP~~k~~~f~T~~DnQ~~v----~I~V-------yqGE~~~~~dn~~L 85 (182)
T 3n8e_A 19 YFQSMDVTPLSLGIET--LGGVFTKLINRNTTIPTKKSQVFSTAADGQTQV----EIKV-------CQGEREMAGDNKLL 85 (182)
T ss_dssp -----CBCSSCEEEEC--TTSBEEEEECTTCBSSEEEEEEECCSSTTCCCE----EEEE-------EESSCSBGGGSEEE
T ss_pred CEEEEEecCCEEEEEE--eCCEEEEEEeCCCccCEEEEEEEEECCCCccEE----EEEE-------EEcCccccccCceE
Confidence 4678999988887765 688887777666555554444444445554443 4443 45677788899999
Q ss_pred eEEEEcCCCCCCCcc
Q psy7140 501 GQFIIKDIKPRTSRQ 515 (1304)
Q Consensus 501 g~~~i~~i~~~~~g~ 515 (1304)
|+|.|+||||.|+|.
T Consensus 86 G~f~l~gipp~p~G~ 100 (182)
T 3n8e_A 86 GQFTLIGIPPAPRGV 100 (182)
T ss_dssp EEEEECCCCCCCTTC
T ss_pred EEEEEcCCCCCCCCC
Confidence 999999999999663
No 67
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=98.86 E-value=2.6e-09 Score=102.48 Aligned_cols=80 Identities=18% Similarity=0.382 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhcc-hhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHH
Q psy7140 1100 EKDRVDAKNALEEYVYELRDGLAN-DKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRA 1178 (1304)
Q Consensus 1100 ~~~~~~akN~LEs~iy~~r~~L~~-~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~ 1178 (1304)
+|++.++||.||+|||.+|..|.+ .+.+.+++++|+.|...|+++++||+++ .++++++|++++++|+.++.||..|+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e~~~~dkl~~eek~~I~~~i~el~~~L~~~-~~ad~e~ik~k~~eL~~~~~~i~~k~ 91 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIEDEKLKDKISPEDKKKIEDKCDEILKWLDSN-QTAEKEEFEHQQKDLEGLANPIISKL 91 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTCTTTGGGSCHHHHHHHHHHHHHHHHHHHHH-TTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 456789999999999999999973 4788999999999999999999999864 66889999999999999999999998
Q ss_pred Hh
Q psy7140 1179 ME 1180 (1304)
Q Consensus 1179 ~e 1180 (1304)
+.
T Consensus 92 y~ 93 (120)
T 2p32_A 92 YQ 93 (120)
T ss_dssp CC
T ss_pred HH
Confidence 74
No 68
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=98.83 E-value=3e-09 Score=103.92 Aligned_cols=84 Identities=20% Similarity=0.207 Sum_probs=58.8
Q ss_pred eeeeEeeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCC
Q psy7140 419 IRHFDVTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQ 498 (1304)
Q Consensus 419 ~~~~~~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~ 498 (1304)
+.++.+.|++||++++.+ .+|.+.++|++++.+|+..++.|+++.|||..+. +. ++++|+.++.+|.
T Consensus 14 ~~d~~l~Dv~p~slGIe~--~~g~~~~lI~rnt~iP~~k~~~f~t~~dnQ~~v~----I~-------VyqGe~~~~~~n~ 80 (135)
T 1q5l_A 14 PRGSHMVDVTPLSLGIET--MGGVMTTLIAKNTTIPTKHSQVFSTAEDNQSAVT----IH-------VLQGERKRAADNK 80 (135)
T ss_dssp -------CCCSSCCCEEE--TTTEECCSSCSSSCSSBCCEEEECCCSSSCSSCE----EE-------EEECCSSSCSSSE
T ss_pred eCcEEEEEeecCcEEEEE--ECCEEEEEEcCCCeEeEeEeEEEEeccCCceEEE----EE-------EEEeCCcccccCc
Confidence 356789999988888765 5788888887777666666666666666655443 33 3456788899999
Q ss_pred ceeEEEEcCCCCCCCcc
Q psy7140 499 FVGQFIIKDIKPRTSRQ 515 (1304)
Q Consensus 499 ~lg~~~i~~i~~~~~g~ 515 (1304)
.||+|.|+|+||.|+|.
T Consensus 81 ~Lg~f~l~gipp~p~G~ 97 (135)
T 1q5l_A 81 SLGQFNLDGINPAPRGM 97 (135)
T ss_dssp EEEEEECCCCCSCCSSS
T ss_pred EEEEEEEeCCCCCCCce
Confidence 99999999999998774
No 69
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=98.73 E-value=1.3e-08 Score=102.45 Aligned_cols=79 Identities=16% Similarity=0.195 Sum_probs=55.4
Q ss_pred eeeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCceeEE
Q psy7140 424 VTDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQF 503 (1304)
Q Consensus 424 ~~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~ 503 (1304)
++||+||+|++.+ .+|.+.++|++++.+|+..++.|++..+||..+ .+.+ ++||+.++.+|..||+|
T Consensus 2 v~Dv~p~slGi~~--~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v----~i~v-------~qGe~~~~~~n~~lg~~ 68 (152)
T 2op6_A 2 NADVNPLTLGIET--VGGVMTKLIGRNTVIPTKKSQVFSTAADSQSAV----SIVI-------YEGERPMVMDNHKLGNF 68 (152)
T ss_dssp -CCBCSSCEEEEE--TTTEEEEEECTTCBSSEEEEEEEEESSTTCCCE----EEEE-------EESSCSBGGGSEEEEEE
T ss_pred ceEeecccEEEEE--eCCEEEEEEeCCCcccEeEEEEEEeCCCCCcEE----EEEE-------EEeCCccCccCCEeEEE
Confidence 5789988887765 678787777666555554455555555665444 4443 44677788899999999
Q ss_pred EEcCCCCCCCcc
Q psy7140 504 IIKDIKPRTSRQ 515 (1304)
Q Consensus 504 ~i~~i~~~~~g~ 515 (1304)
.|.|+||.|+|.
T Consensus 69 ~l~gipp~p~G~ 80 (152)
T 2op6_A 69 DVTGIPPAPRGV 80 (152)
T ss_dssp EECCCCCCCTTC
T ss_pred EEECCCCCCCCC
Confidence 999999998774
No 70
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=98.71 E-value=7.9e-09 Score=98.33 Aligned_cols=78 Identities=17% Similarity=0.368 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHHHHHHhc-chhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccchHHHHHHhh
Q psy7140 1103 RVDAKNALEEYVYELRDGLA-NDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDPVKMRAMEY 1181 (1304)
Q Consensus 1103 ~~~akN~LEs~iy~~r~~L~-~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e~ 1181 (1304)
+.++||.||+|||.+|..|. +++.+.+++++|+.|...|+++++||+++ .+++.++|++++++|+.++.||..|+++.
T Consensus 2 l~EarN~aE~~iy~~e~~L~~~e~~~kl~~~ek~~i~~~i~~l~~~L~~~-~~ad~~~i~~~~~~L~~~~~~i~~~~~~~ 80 (113)
T 1ud0_A 2 VPRGSHMLESYAFNMKATVEDEKLQGKINDEDKQKILDKCNEIISWLDKN-QTAEKEEFEHQQKELEKVCNPIITKLYQS 80 (113)
T ss_dssp --CCHHHHHHHHHHHHHHHTSGGGTTTSCHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHTHHHHHHHHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHhcchhhhccCCHHHHHHHHHHHHHHHHHHHcC-CccCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46789999999999999997 36888999999999999999999999743 45678999999999999999999998853
No 71
>1u00_A HSC66, chaperone protein HSCA; DNAK, HSP70; 1.95A {Escherichia coli} SCOP: a.8.4.1 b.130.1.1
Probab=98.63 E-value=2.2e-08 Score=107.68 Aligned_cols=78 Identities=14% Similarity=0.164 Sum_probs=53.1
Q ss_pred eeeeccceEEEEEecCCccceecccCCCCccceeEEEEEEeccceeeeeeeecCCCCCCcccccccCCCCCCCCceeEEE
Q psy7140 425 TDVQNYPIKVAWNPVGGEDGENLAFSSTQPVPFTKVLTFYRANVFDVQAYYDCPVPYPTQFVAYYDCPVPYPTQFVGQFI 504 (1304)
Q Consensus 425 ~dv~~~~~~i~~~~~~~~~~~~~~~~~~~p~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~n~~lg~~~ 504 (1304)
+||+|||+++.+ .||.+.++|++++.+|+..++.|++..++|..+ .+++ ++||+.++.+|..||+|.
T Consensus 1 ~Dv~p~slGie~--~~g~~~~li~rnt~iP~~k~~~f~t~~d~Q~~v----~i~v-------~qGe~~~~~~n~~Lg~f~ 67 (227)
T 1u00_A 1 MDVIPLSLGLET--MGGLVEKVIPRNTTIPVARAQDFTTFKDGQTAM----SIHV-------MQGERELVQDCRSLARFA 67 (227)
T ss_dssp CCBCSSCEEEEE--TTTEEEEEECTTCBSSEEEEEEEECSSTTCCCE----EEEE-------EECSSSBGGGSEEEEEEE
T ss_pred CCcccceEEEEE--eCCEEEEEEeCcCccCceEEEEEEecCCCceEE----EEEE-------EecCCccCCCCCEEEEEE
Confidence 378877777754 678887776655544444444444444554443 3443 456777888999999999
Q ss_pred EcCCCCCCCcc
Q psy7140 505 IKDIKPRTSRQ 515 (1304)
Q Consensus 505 i~~i~~~~~g~ 515 (1304)
|+||||.|+|.
T Consensus 68 l~gi~~~p~G~ 78 (227)
T 1u00_A 68 LRGIPALPAGG 78 (227)
T ss_dssp ECCCCCCSTTC
T ss_pred EeCCCCCCCCc
Confidence 99999988663
No 72
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.48 E-value=8.4e-06 Score=90.40 Aligned_cols=48 Identities=15% Similarity=0.104 Sum_probs=43.9
Q ss_pred cEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHhhHh
Q psy7140 366 HSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAIL 413 (1304)
Q Consensus 366 ~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~aa~l 413 (1304)
+.|+++||.++.|.+++.+++.++.++..+.+++.+.|+|||++|+..
T Consensus 210 ~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 210 KDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp SSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred CeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 679999999999999999999999888888888889999999998753
No 73
>1hux_A Activator of (R)-2-hydroxyglutaryl-COA dehydratase; actin fold, metal binding protein; HET: ADP; 3.00A {Acidaminococcus fermentans} SCOP: c.55.1.5
Probab=98.36 E-value=6.8e-05 Score=83.07 Aligned_cols=73 Identities=11% Similarity=0.064 Sum_probs=55.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHh
Q psy7140 866 ETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAIL 942 (1304)
Q Consensus 866 e~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~l 942 (1304)
++++..+++.+...+.+.++..++ .+.|+++||.++.|.+++.+.+.+|.++..+.+++.+.|+|||+.|+..
T Consensus 185 ~di~~av~e~Va~~i~~~~~~~~~----~~~i~~~GG~a~n~~~~~~~~~~lg~~v~~p~~~~~~~AlGAAl~A~~~ 257 (270)
T 1hux_A 185 IDIIAGIHRSVASRVIGLANRVGI----VKDVVMTGGVAQNYGVRGALEEGLGVEIKTSPLAQYNGALGAALYAYKK 257 (270)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCC----CSSEEEESGGGGCHHHHHHHHHHHCSCEECCGGGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCC----CCeEEEeCccccCHHHHHHHHHHHCCCeEeCCCcchHhHHHHHHHHHHh
Confidence 344444555555444455543322 2679999999999999999999999998888888889999999998753
No 74
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.48 E-value=0.00036 Score=83.88 Aligned_cols=95 Identities=18% Similarity=0.361 Sum_probs=75.1
Q ss_pred ceEEEeecCCCCHHHHHHHHHHHH-HcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEE
Q psy7140 168 HDCVLAVPSYFTNNERKALLTAAS-IAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 246 (1304)
Q Consensus 168 ~~~vitVPa~~~~~qr~~l~~A~~-~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~ 246 (1304)
..+++|.|..++...|+.+.+.+. ..|++.+.++.+|.||+++++. ...-||+|+|+|+|+++.+ .
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----------~ttGLVVDiG~g~T~VvPV--~ 288 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----------STSTCVVNIGAAETRIACV--D 288 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----------SSCEEEEEECSSCEEEEEE--E
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----------CCceEEEcCCCceEEEEEE--e
Confidence 369999999999999999999874 6899999999999999987753 1235899999999999986 3
Q ss_pred CCeEEEEEEecCCCcccHHHHHHHHHHHHH
Q psy7140 247 KGKLKVLSNVCDSEIGGRNIDKILAEYIST 276 (1304)
Q Consensus 247 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~ 276 (1304)
+|.. +........+||+++|..|.++|..
T Consensus 289 eG~v-l~~ai~rL~iGG~dLT~yL~kLL~~ 317 (655)
T 4am6_A 289 EGTV-LEHSAITLDYGGDDITRLFALFLLQ 317 (655)
T ss_dssp TTEE-CGGGCEEESCCHHHHHHHHHHHHHH
T ss_pred CCEE-EhhheeeecchHHHHHHHHHHHHHH
Confidence 4522 1111123579999999999998853
No 75
>4am6_A Actin-like protein ARP8; nuclear protein, chromatin remodelling complex, ATP-binding nuclear actin-related protein; 2.70A {Saccharomyces cerevisiae} PDB: 4am7_A*
Probab=97.33 E-value=0.00059 Score=82.09 Aligned_cols=123 Identities=18% Similarity=0.334 Sum_probs=88.6
Q ss_pred ceEEEeecCCCCHHHHHHHHHHH-HHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEE
Q psy7140 697 HDCVLAVPSYFTNNERKALLTAA-SIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFV 775 (1304)
Q Consensus 697 ~~~VitVP~~f~~~qr~~l~~Aa-~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~ 775 (1304)
..+++|.|..++...|+.+.+.+ +..|+..+.++.+|.||++++|+ ...-||+|+|+|+|+++.+.
T Consensus 222 ~pVLLTEPplnp~~~REkm~EIlFE~fgvpavyl~~qavlAlyasGl-----------~ttGLVVDiG~g~T~VvPV~-- 288 (655)
T 4am6_A 222 YKVVLVIPDIFKKSHVETFIRVLLTELQFQAVAIIQESLATCYGAGI-----------STSTCVVNIGAAETRIACVD-- 288 (655)
T ss_dssp CEEEEEECTTCCHHHHHHHHHHHHHTSCCSEEEEEEHHHHHHHHSCC-----------SSCEEEEEECSSCEEEEEEE--
T ss_pred CcEEEEeCCCCCHHHHHHHHHHHHhhcCCCeeeeccHHHHHHHhCCC-----------CCceEEEcCCCceEEEEEEe--
Confidence 47999999999999999998887 56899999999999999988764 13478999999999999873
Q ss_pred CCeEEEEEEecCCCCCcHHHHHHHHHHHHHHHHHhcCC-CCCCCHHHHHHHHHHHHHHHHHhccC
Q psy7140 776 KGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKI-DPRTNARAYIRLLSEIEKLKKQMSAN 839 (1304)
Q Consensus 776 ~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~-~~~~~~~~~~rL~~~ae~~K~~Ls~~ 839 (1304)
.|. -+........+||+++|..|.++|..+- |.. +..-+... =+..++.+|+.++--
T Consensus 289 eG~-vl~~ai~rL~iGG~dLT~yL~kLL~~rg---ypy~~~~f~t~~---e~eiVrdIKEk~CyV 346 (655)
T 4am6_A 289 EGT-VLEHSAITLDYGGDDITRLFALFLLQSD---FPLQDWKIDSKH---GWLLAERLKKNFTTF 346 (655)
T ss_dssp TTE-ECGGGCEEESCCHHHHHHHHHHHHHHTT---CSCCSCCTTSHH---HHHHHHHHHHHHCCC
T ss_pred CCE-EEhhheeeecchHHHHHHHHHHHHHHcC---CCccccCCCCcc---hHHHHHHHHHheEEE
Confidence 331 1111112347999999999999986541 110 11111111 134578899999864
No 76
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.66 E-value=0.012 Score=64.79 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=55.2
Q ss_pred ecHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecC-CCCChhHHHHHHHHc---CCCCCCCCCchhHHHhH
Q psy7140 860 LKRNDLE-TLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGG-SSRIPAFKNVIESVF---HKPPSTTLNQDEAVSRG 934 (1304)
Q Consensus 860 itr~efe-~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG-~srip~v~~~l~~~f---g~~~~~~~n~~eava~G 934 (1304)
.+++++- .++..+.+++..+...+.+..+ ++.|+++|| .+..|.+++.|++.+ +.++..+.+|..+.|.|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 4566554 3445555555555554444444 346999999 899999999999985 56777888999999999
Q ss_pred HHHHh
Q psy7140 935 CALQC 939 (1304)
Q Consensus 935 aa~~a 939 (1304)
||+.+
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99864
No 77
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=96.05 E-value=0.033 Score=62.97 Aligned_cols=45 Identities=9% Similarity=-0.016 Sum_probs=39.2
Q ss_pred cEEEEEcC-CCCchhHHHHHHHhcC------CCCCCCCCchhHHHHHHHHHh
Q psy7140 366 HSIEIVGG-SSRIPAFKNVIESVFH------KPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 366 ~~ViLvGG-~sr~p~v~~~l~~~f~------~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+.|+++|| .+..|.+++.|++.++ .++....+|..+-|+|||+.+
T Consensus 307 ~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 307 DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 46999999 9999999999999874 456667799999999999985
No 78
>2ews_A Pantothenate kinase; PANK, structural genomics, structural genomics consortium, S transferase; HET: ANP; 2.05A {Staphylococcus aureus subsp} SCOP: c.55.1.14
Probab=96.02 E-value=0.04 Score=60.62 Aligned_cols=75 Identities=12% Similarity=0.022 Sum_probs=54.1
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcC-CCCchhHHHHHHHhc---CCCCCCCCCchhHHHHH
Q psy7140 331 LKRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGG-SSRIPAFKNVIESVF---HKPPSTTLNQDEAVSRG 405 (1304)
Q Consensus 331 itr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG-~sr~p~v~~~l~~~f---~~~~~~~~np~eaVa~G 405 (1304)
.+++++-. ++.-+.++|..+.....+..+ ++.|+++|| .+..|.+++.+++.+ +.++..+.+|..+.|+|
T Consensus 207 ~~~eDIaasl~~sV~~~I~~la~~~a~~~~-----i~~Vvf~Gg~l~~n~~l~~~l~~~~~~~~~~~~~p~~~~~~gAlG 281 (287)
T 2ews_A 207 FTPSNKLAAVIGVVGEVVTTMAITVAREFK-----TENIVYIGSSFHNNALLRKVVEDYTVLRGCKPYYVENGAFSGAIG 281 (287)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHTT-----CCEEEEESGGGTTCHHHHHHHHHHHHHTTCEEEECTTGGGHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhCC-----CCeEEEeCCchhcCHHHHHHHHHHHhhCCceEEECCCccHHHHHH
Confidence 45666553 344444555554444334333 446999999 899999999999985 56677788999999999
Q ss_pred HHHHh
Q psy7140 406 CALQC 410 (1304)
Q Consensus 406 aa~~a 410 (1304)
||+++
T Consensus 282 AaL~~ 286 (287)
T 2ews_A 282 ALYLE 286 (287)
T ss_dssp HHHTC
T ss_pred HHHhC
Confidence 99974
No 79
>2i7n_A Pantothenate kinase 1; PANK, transferase; HET: ACO; 1.90A {Homo sapiens} SCOP: c.55.1.14 c.55.1.14 PDB: 3smp_A* 3sms_A* 2i7p_A* 3mk6_A*
Probab=95.95 E-value=0.023 Score=64.23 Aligned_cols=45 Identities=9% Similarity=-0.016 Sum_probs=39.0
Q ss_pred eEEEEecC-CCCChhHHHHHHHHcC------CCCCCCCCchhHHHhHHHHHh
Q psy7140 895 HSIEIVGG-SSRIPAFKNVIESVFH------KPPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 895 ~~V~LvGG-~srip~v~~~l~~~fg------~~~~~~~n~~eava~Gaa~~a 939 (1304)
+.|+++|| .+..|.+++.|++.++ .++..+.+|..+-|+|||+.+
T Consensus 307 ~~IvftGgfla~n~~~~~~L~~~l~~ws~g~~~~~~~~~~~y~GAlGAaL~~ 358 (360)
T 2i7n_A 307 DRVVFVGNFLRINMVSMKLLAYAMDFWSKGQLKALFLEHEGYFGAVGALLEL 358 (360)
T ss_dssp CCEEEESGGGCSSSHHHHHHHHHHHHHTTTSCCEEEETTTTCHHHHHHHHHH
T ss_pred CeEEEeCcccccCHHHHHHHHHHHhhhhcCCeeEEEcCCccHHHHHHHHHHh
Confidence 46999999 8999999999999973 456667799999999999975
No 80
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=95.80 E-value=0.54 Score=52.52 Aligned_cols=43 Identities=19% Similarity=0.156 Sum_probs=27.7
Q ss_pred cCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCI 242 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 242 (1304)
.|++ +.+.|+..|||++-...... ...++++++-+|-| .-.++
T Consensus 98 ~~~p-v~v~NDa~aaal~E~~~g~~-----~~~~~~~~l~~GtG-iG~gi 140 (302)
T 3vov_A 98 TGRP-VFLENDANAAALAEHHLGAA-----QGEESSLYLTVSTG-IGGGV 140 (302)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT-----TTCSCEEEEEESSS-EEEEE
T ss_pred hCCC-EEEEechHHHHHHHHHhCCC-----CCCCCEEEEEECCc-eeEEE
Confidence 4776 57999999999986543221 12345777888877 33344
No 81
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.70 E-value=0.09 Score=59.02 Aligned_cols=78 Identities=18% Similarity=0.122 Sum_probs=51.3
Q ss_pred HHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcc
Q psy7140 183 RKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIG 262 (1304)
Q Consensus 183 r~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG 262 (1304)
...+..+-+..|+++.-+-.|.+|...+.+.... ++ .....+|+|+|||+|.+++.+ ++.+... ...++|
T Consensus 100 ~~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~-l~----~~~~~lvvDIGGGStEl~~~~--~~~~~~~---~Sl~~G 169 (315)
T 1t6c_A 100 EEFLERVKREVGLVVEVITPEQEGRYAYLAVAYS-LK----PEGEVCVVDQGGGSTEYVFGK--GYKVREV---ISLPIG 169 (315)
T ss_dssp HHHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHH-TC----CCSEEEEEEEETTEEEEEEEE--TTEEEEE---EEECCC
T ss_pred HHHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhh-cc----cCCCEEEEEeCCCcEEEEEEe--CCceeeE---EEEecc
Confidence 4455555567899986666666665555554332 11 234589999999999999854 5554322 245899
Q ss_pred cHHHHHHH
Q psy7140 263 GRNIDKIL 270 (1304)
Q Consensus 263 G~~~D~~l 270 (1304)
+-.+.+.+
T Consensus 170 ~v~l~e~~ 177 (315)
T 1t6c_A 170 IVNLTETF 177 (315)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHh
Confidence 88877664
No 82
>1t6c_A Exopolyphosphatase; alpha/beta protein, actin-like fold, hydrolase; 1.53A {Aquifex aeolicus} SCOP: c.55.1.8 c.55.1.8 PDB: 1t6d_A 2j4r_A*
Probab=95.47 E-value=0.15 Score=57.22 Aligned_cols=77 Identities=19% Similarity=0.129 Sum_probs=49.0
Q ss_pred HHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCc
Q psy7140 713 KALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGG 792 (1304)
Q Consensus 713 ~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG 792 (1304)
..+..+-+..|+++--|-.|.+|...+.|.... ++ .....+|+|+|||||.+++++ ++.+.. ..+.++|+
T Consensus 101 ~fl~~v~~~~G~~i~vIsg~eEA~l~~~gv~~~-l~----~~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~~G~ 170 (315)
T 1t6c_A 101 EFLERVKREVGLVVEVITPEQEGRYAYLAVAYS-LK----PEGEVCVVDQGGGSTEYVFGK--GYKVRE---VISLPIGI 170 (315)
T ss_dssp HHHHHHHHHTCCCEEECCHHHHHHHHHHHHHHH-TC----CCSEEEEEEEETTEEEEEEEE--TTEEEE---EEEECCCH
T ss_pred HHHHHHHHHHCCCEEEcCHHHHHHHHHHHHHhh-cc----cCCCEEEEEeCCCcEEEEEEe--CCceee---EEEEeccH
Confidence 334444457899975555566665554454332 21 245699999999999999964 454422 23458999
Q ss_pred HHHHHHH
Q psy7140 793 RNIDKIL 799 (1304)
Q Consensus 793 ~~~D~~l 799 (1304)
..+.+.+
T Consensus 171 v~l~e~~ 177 (315)
T 1t6c_A 171 VNLTETF 177 (315)
T ss_dssp HHHHHHH
T ss_pred HHHHHHh
Confidence 8877765
No 83
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.46 E-value=4.5 Score=45.53 Aligned_cols=63 Identities=8% Similarity=0.061 Sum_probs=43.0
Q ss_pred HHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc---CCCCCCCC---CchhHHHHHHHHHhhHhc
Q psy7140 347 IEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPSTTL---NQDEAVSRGCALQCAILS 414 (1304)
Q Consensus 347 i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f---~~~~~~~~---np~eaVa~Gaa~~aa~ls 414 (1304)
+...++++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. --|.++++|+|.+.....
T Consensus 232 l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~ 300 (330)
T 2ivn_A 232 LVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMYKA 300 (330)
T ss_dssp HHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHHhc
Confidence 4444455544433 468999999999999999999877 33333322 336789999887655443
No 84
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=95.25 E-value=4.7 Score=44.56 Aligned_cols=47 Identities=11% Similarity=0.154 Sum_probs=34.8
Q ss_pred eeEEEEecCCCCChhHHHHHHHHcC-CCCCCCCCchhHHHhHHHHHhhH
Q psy7140 894 IHSIEIVGGSSRIPAFKNVIESVFH-KPPSTTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 894 I~~V~LvGG~srip~v~~~l~~~fg-~~~~~~~n~~eava~Gaa~~aa~ 941 (1304)
.+.|+|.||.+..+.+.+.|++.+. .++..+. .+.+.+.||+..+..
T Consensus 240 p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 240 TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 3679999998877888888887774 3444444 567899999987753
No 85
>2e2o_A Hexokinase; acetate and sugar kinases, HSP70, actin superfamily, ribonuc fold, sugar kinase, glucose, phosphoryl transfer, transferase; HET: BGC; 1.65A {Sulfolobus tokodaii} PDB: 2e2n_A* 2e2p_A* 2e2q_A*
Probab=95.20 E-value=3.6 Score=45.54 Aligned_cols=47 Identities=11% Similarity=0.154 Sum_probs=35.0
Q ss_pred ccEEEEEcCCCCchhHHHHHHHhcC-CCCCCCCCchhHHHHHHHHHhhH
Q psy7140 365 IHSIEIVGGSSRIPAFKNVIESVFH-KPPSTTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 365 i~~ViLvGG~sr~p~v~~~l~~~f~-~~~~~~~np~eaVa~Gaa~~aa~ 412 (1304)
.+.|+|.||.+..+.+.+.+++.+. .++..+. .+.+.++|||..+..
T Consensus 240 p~~IvlgGgv~~~~~~~~~l~~~~~~~~i~~~~-~~~~~~~GAa~la~~ 287 (299)
T 2e2o_A 240 TNKVYLKGGMFRSNIYHKFFTLYLEKEGIISDL-GKRSPEIGAVILAYK 287 (299)
T ss_dssp CSEEEEESGGGGSHHHHHHHHHHHHHTTCEEEC-CSCCHHHHHHHHHHH
T ss_pred CCEEEEECCccCcHHHHHHHHHHCCCCeEeccC-CCCChHHHHHHHHHH
Confidence 4679999998877888888887775 3444444 567889999988753
No 86
>2ivn_A O-sialoglycoprotein endopeptidase; UP1 keops complex, Fe/Zn dependent nucleotide phosphatase, metalloprotease, hypothetical protein, zinc; HET: ANP; 1.65A {Pyrococcus abyssi} PDB: 2ivo_A 2ivp_A*
Probab=95.15 E-value=2 Score=48.37 Aligned_cols=65 Identities=9% Similarity=0.096 Sum_probs=44.8
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc---CCCCCCCC---CchhHHHhHHHHHhhH
Q psy7140 872 IFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPSTTL---NQDEAVSRGCALQCAI 941 (1304)
Q Consensus 872 ~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f---g~~~~~~~---n~~eava~Gaa~~aa~ 941 (1304)
+.+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++..+. --|.+++.|+|.+...
T Consensus 228 l~~~l~~~~~~~~~~~~-----~~~vvlsGGVa~N~~l~~~l~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~ 298 (330)
T 2ivn_A 228 AFAALVEVTERAVAHTE-----KDEVVLVGGVAANNRLREMLRIMTEDRGIKFFVPPYDLCRDNGAMIAYTGLRMY 298 (330)
T ss_dssp HHHHHHHHHHHHHHHHC-----CSEEEEESGGGGCHHHHHHHHHHHHHHTCEEECCCHHHHSSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEEccHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChhHHHHHHHHHHHH
Confidence 33444455555555443 468999999999999999999877 44444333 3467889998876543
No 87
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=94.81 E-value=1.5 Score=49.36 Aligned_cols=68 Identities=18% Similarity=0.209 Sum_probs=41.3
Q ss_pred ccceEEEeecCCCCHH----------------HHHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEE
Q psy7140 166 KVHDCVLAVPSYFTNN----------------ERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVA 229 (1304)
Q Consensus 166 ~~~~~vitVPa~~~~~----------------qr~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vl 229 (1304)
++..+.|++|...+.. -++.+.+. .|++ +.+.|+..|||++....... ...++++
T Consensus 56 ~i~gigi~~pG~vd~~~g~v~~~~~l~w~~~~l~~~l~~~---~~~p-v~v~NDa~aaal~E~~~g~~-----~~~~~~~ 126 (321)
T 3vgl_A 56 DVEAVGIGAAGYVDDKRATVLFAPNIDWRHEPLKDKVEQR---VGLP-VVVENDANAAAWGEYRFGAG-----QGHDDVI 126 (321)
T ss_dssp CEEEEEEEESSEECTTSSCEEECSSSCCEEECHHHHHHHH---HCSC-EEEEEHHHHHHHHHHHHSTT-----TTCSSEE
T ss_pred CceEEEEeccccEeCCCCEEEeCCCCCCcCCCHHHHHhhh---hCCC-EEEEehhhhHHHHHHHhCCC-----CCCCCEE
Confidence 4566677777654432 13444443 3776 58999999999986443221 1234577
Q ss_pred EEEecCCeEEEEEE
Q psy7140 230 FVDFGYSALQVCIA 243 (1304)
Q Consensus 230 V~D~GggT~dvsv~ 243 (1304)
++-+|.| .-.+++
T Consensus 127 ~l~~GtG-iG~gii 139 (321)
T 3vgl_A 127 CITLGTG-LGGGII 139 (321)
T ss_dssp EEEESSS-EEEEEE
T ss_pred EEEeCcc-eEEEEE
Confidence 7888887 444443
No 88
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=94.70 E-value=0.037 Score=67.82 Aligned_cols=84 Identities=13% Similarity=0.160 Sum_probs=62.0
Q ss_pred EecHHHHHHHHHHHHHHHHHHHHHHH---HhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHH
Q psy7140 859 ELKRNDLETLCEHIFGRIEICLNKCI---AESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGC 935 (1304)
Q Consensus 859 ~itr~efe~l~~~~~~~i~~~i~~~l---~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Ga 935 (1304)
.-+|.++-.++..+++.+.-.++..+ ++.+. .++.|.++||+++.+.+.+.+.+.||.++... ...|+.|+||
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alGA 483 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIETMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLGS 483 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHHH
Confidence 34788875545555555554444444 34443 47889999999999999999999999988665 3467999999
Q ss_pred HHHhhHhcCCc
Q psy7140 936 ALQCAILSPAV 946 (1304)
Q Consensus 936 a~~aa~ls~~~ 946 (1304)
|+.|+.-.+.+
T Consensus 484 A~lA~~a~G~~ 494 (554)
T 3l0q_A 484 AMMGTVAAGVF 494 (554)
T ss_dssp HHHHHHHTTSS
T ss_pred HHHHHHHcCCc
Confidence 99998766543
No 89
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=94.34 E-value=0.053 Score=66.11 Aligned_cols=77 Identities=14% Similarity=0.105 Sum_probs=59.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhc
Q psy7140 866 ETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 866 e~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls 943 (1304)
..++..+++.+.-.++..++..+.....++.|.++||+++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.
T Consensus 407 ~~l~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~ 483 (538)
T 4bc3_A 407 DVEVRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGL 483 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHh
Confidence 45556666666666666666555444457889999999999999999999999988665 457899999999988543
No 90
>3lof_A Heat shock 70 kDa protein 1; structural genomics, HSPA1B, HSP70, PSI-2, prote structure initiative; 2.40A {Homo sapiens} PDB: 2lmg_A
Probab=94.31 E-value=0.091 Score=49.21 Aligned_cols=76 Identities=12% Similarity=0.224 Sum_probs=58.3
Q ss_pred cChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHH
Q psy7140 1183 MRPNILEEYKHSVQSAKNIVDAAFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKY 1262 (1304)
Q Consensus 1183 ~rp~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~ 1262 (1304)
+|-++-+.|.+++..+++.|.. +.....+++++++.|.+.|+++..||+.. +.....+|+.|++
T Consensus 6 e~ieakN~lEs~iy~~e~~l~e----~~~~~kl~~eek~~i~~~i~e~~~wL~~~------------~~a~~e~i~~k~~ 69 (113)
T 3lof_A 6 ERVSAKNALESYAFNMKSAVED----EGLKGKISEADKKKVLDKCQEVISWLDAN------------TLAEKDEFEHKRK 69 (113)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTC----GGGBTTBCHHHHHHHHHHHHHHHHHHHHC------------TTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhcc----hhhhccCCHHHHHHHHHHHHHHHHHHHcC------------CcCCHHHHHHHHH
Confidence 4455667777888888776642 11235799999999999999999999851 1124789999999
Q ss_pred HHHHHHHHhhcC
Q psy7140 1263 KFEKSVWSVLNK 1274 (1304)
Q Consensus 1263 ~l~~~~~~l~~k 1274 (1304)
.|+..+.+|+.+
T Consensus 70 eL~~~~~~i~~k 81 (113)
T 3lof_A 70 ELEQVCNPIISG 81 (113)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 999999999865
No 91
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=94.28 E-value=0.057 Score=65.39 Aligned_cols=80 Identities=16% Similarity=0.211 Sum_probs=57.7
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCC-CCCCCchhHHHhHHHHHh
Q psy7140 861 KRNDLETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPP-STTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 861 tr~efe~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~-~~~~n~~eava~Gaa~~a 939 (1304)
+|.++ +..+++.+.-.++..++...- .. ++.|.++||+++.+.+.+.+.+.+|.++ ... .+.|+.|+|||+.|
T Consensus 375 ~~~~l---~RAvlEgia~~~~~~~~~l~~-g~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~-~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQI---LLAVLEGAALSLRWCAELLGM-EK-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKP-DAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHTG-GG-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECC-CGGGHHHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHhc-CC-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEec-CCCCchHHHHHHHH
Confidence 45554 444444444444444433222 23 7899999999999999999999999998 554 58899999999999
Q ss_pred hHhcCCc
Q psy7140 940 AILSPAV 946 (1304)
Q Consensus 940 a~ls~~~ 946 (1304)
+.-.+.+
T Consensus 449 ~~a~G~~ 455 (511)
T 3hz6_A 449 AVELEWS 455 (511)
T ss_dssp HHHTTSC
T ss_pred HHHhCCc
Confidence 8766543
No 92
>3l0q_A Xylulose kinase; xlylulose kinase, SGX, PSI, structural genomics, protein structure initiative; HET: MSE XUL EPE; 1.61A {Yersinia pseudotuberculosis} PDB: 3gg4_A*
Probab=94.27 E-value=0.053 Score=66.44 Aligned_cols=82 Identities=12% Similarity=0.152 Sum_probs=59.8
Q ss_pred EEcHHHHHH----HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHH
Q psy7140 330 ELKRNDLET----LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRG 405 (1304)
Q Consensus 330 ~itr~~fe~----~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~G 405 (1304)
.-+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++.|.+.+++.+.||.++... ...|+.|+|
T Consensus 408 ~~~~~~l~r~~rAvlEgia~~~r~~~e-~l~~~g~---~~~~i~~~GG~aks~~~~Qi~ADv~g~pV~~~-~~~e~~alG 482 (554)
T 3l0q_A 408 STTPEDMALRYLATIQALALGTRHIIE-TMNQNGY---NIDTMMASGGGTKNPIFVQEHANATGCAMLLP-EESEAMLLG 482 (554)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CCCEEEEESGGGGCHHHHHHHHHHHCCEEEEE-SCSCHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEeCccccCHHHHHHHHHhhCCeEEec-CCCcchHHH
Confidence 347888743 44444444444443 3444443 47889999999999999999999999877654 356899999
Q ss_pred HHHHhhHhcCC
Q psy7140 406 CALQCAILSPA 416 (1304)
Q Consensus 406 aa~~aa~ls~~ 416 (1304)
||+.|+.-.+.
T Consensus 483 AA~lA~~a~G~ 493 (554)
T 3l0q_A 483 SAMMGTVAAGV 493 (554)
T ss_dssp HHHHHHHHTTS
T ss_pred HHHHHHHHcCC
Confidence 99999876654
No 93
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=94.21 E-value=0.041 Score=66.26 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=44.9
Q ss_pred ceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCC
Q psy7140 893 AIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPA 945 (1304)
Q Consensus 893 ~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~ 945 (1304)
.++.|.++||+++.+.+.+.+.+.+|.++......+.+.|+|||+.|+.-.+.
T Consensus 386 ~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA~~~~g~ 438 (484)
T 2itm_A 386 KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLAQIAANP 438 (484)
T ss_dssp CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHHHHHHCT
T ss_pred CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHHHHHcCC
Confidence 46789999999999999999999999998777555556899999999865543
No 94
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=94.18 E-value=0.06 Score=65.06 Aligned_cols=76 Identities=13% Similarity=0.191 Sum_probs=55.6
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCC
Q psy7140 868 LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPA 945 (1304)
Q Consensus 868 l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~ 945 (1304)
++..+++.+.-.++..++...... .++.|.++||+++.+.+.+.+.+.+|.++.... ..|+.|+|||+.|+.-.+.
T Consensus 369 l~rAvlEgia~~~~~~l~~l~~~~-~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~-~~e~~alGaA~lA~~~~g~ 444 (497)
T 2zf5_O 369 LARATLEAIAYLTRDVVDEMEKLV-QIKELRVDGGATANDFLMQFQADILNRKVIRPV-VKETTALGAAYLAGLAVDY 444 (497)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTTS-CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEES-CSCHHHHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHHHHHHHHHHHhcC-CcceEEEeCccccCHHHHHHHHhhcCCeEEEcC-CCcchHHHHHHHHHHHhCc
Confidence 344555555555555554433222 578899999999999999999999999887653 4569999999999876554
No 95
>3vgl_A Glucokinase; ROK family, transferase; HET: BGC ANP; 1.55A {Streptomyces griseus} PDB: 3vgk_A* 3vgm_A*
Probab=94.16 E-value=4.9 Score=45.01 Aligned_cols=44 Identities=23% Similarity=0.215 Sum_probs=29.2
Q ss_pred cCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEE
Q psy7140 722 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 722 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 772 (1304)
.|++ +.+.|+..|+|++-..... ....++++++-+|.| .-..++
T Consensus 96 ~~~p-v~v~NDa~aaal~E~~~g~-----~~~~~~~~~l~~GtG-iG~gii 139 (321)
T 3vgl_A 96 VGLP-VVVENDANAAAWGEYRFGA-----GQGHDDVICITLGTG-LGGGII 139 (321)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHST-----TTTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEEehhhhHHHHHHHhCC-----CCCCCCEEEEEeCcc-eEEEEE
Confidence 3776 6899999999987543321 123456888888887 555554
No 96
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=94.15 E-value=8 Score=43.38 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=32.3
Q ss_pred eeEEEEecCCCCChhHHHHHHHHcCCC---------CCCCCCchhHHHhHHHHHh
Q psy7140 894 IHSIEIVGGSSRIPAFKNVIESVFHKP---------PSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 894 I~~V~LvGG~srip~v~~~l~~~fg~~---------~~~~~n~~eava~Gaa~~a 939 (1304)
.+.|+|.||.+..+.+.+.|++.+... +....-.+.+.++|||..+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 368999999998887777777766321 1222345789999999765
No 97
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=94.07 E-value=0.06 Score=65.07 Aligned_cols=78 Identities=10% Similarity=0.170 Sum_probs=56.1
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHH
Q psy7140 861 KRNDLETLCEHIFGRIEICLNKC---IAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCAL 937 (1304)
Q Consensus 861 tr~efe~l~~~~~~~i~~~i~~~---l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~ 937 (1304)
+|.++ +..+++.+.-.++.. |++.+. .++.|.++||+++.+.+.+.+.+.+|.++... .+.|+.|+|||+
T Consensus 364 ~~~~l---~RAvlEgia~~~r~~~~~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~ 436 (504)
T 3ll3_A 364 QKPEM---ARAVIEGIIFNLYDAASNLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMF 436 (504)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHH
Confidence 45554 344444443333333 344442 57899999999999999999999999988664 456799999999
Q ss_pred HhhHhcCC
Q psy7140 938 QCAILSPA 945 (1304)
Q Consensus 938 ~aa~ls~~ 945 (1304)
.|+.-.+.
T Consensus 437 lA~~a~G~ 444 (504)
T 3ll3_A 437 LARQALGL 444 (504)
T ss_dssp HHHHHTTS
T ss_pred HHHHHcCc
Confidence 99875554
No 98
>4bc3_A Xylulose kinase; transferase, glucuronate xylulokinase pathway; HET: MSE EDO; 1.68A {Homo sapiens} PDB: 4bc2_A* 4bc4_A* 4bc5_A*
Probab=94.01 E-value=0.075 Score=64.77 Aligned_cols=75 Identities=15% Similarity=0.110 Sum_probs=53.5
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHhhHhcC
Q psy7140 340 CEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSP 415 (1304)
Q Consensus 340 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~aa~ls~ 415 (1304)
+..+++.+.-.++..++..+.....++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|+.-.+
T Consensus 410 ~RAvlEgia~~~r~~~~~l~~~g~~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G 484 (538)
T 4bc3_A 410 VRALIEGQFMAKRIHAEGLGYRVMSKTKILATGGASHNREILQVLADVFDAPVYVI-DTANSACVGSAYRAFHGLA 484 (538)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCCCTTCCEEEEEGGGGCHHHHHHHHHHHTSCEEEC-CCTTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhhcCCCCCeEEEEcchhcCHHHHHHHHHHhCCceEec-CCCCchHHHHHHHHHHHhC
Confidence 33344443333344444434334457889999999999999999999999877554 4578999999999986443
No 99
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=94.01 E-value=1.2 Score=49.50 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=35.1
Q ss_pred ccEEEEEcCCCCchhHHHHHHHhcCCC------CCCCCCchhHHHHHHHHHhhH
Q psy7140 365 IHSIEIVGGSSRIPAFKNVIESVFHKP------PSTTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 365 i~~ViLvGG~sr~p~v~~~l~~~f~~~------~~~~~np~eaVa~Gaa~~aa~ 412 (1304)
++.|+|-||.+..|.+.+.|++.+... +..+.-.+.+.++|||..+..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 468999999998888888888777422 123345577999999988753
No 100
>3vov_A Glucokinase, hexokinase; ROK, sugar kinase, transferase; 2.02A {Thermus thermophilus}
Probab=93.98 E-value=4.7 Score=44.74 Aligned_cols=47 Identities=17% Similarity=0.208 Sum_probs=29.8
Q ss_pred eeEEEEecCCC-CC-hhHHHHHHHHcCC--------CCCCCCCchhHHHhHHHHHhh
Q psy7140 894 IHSIEIVGGSS-RI-PAFKNVIESVFHK--------PPSTTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 894 I~~V~LvGG~s-ri-p~v~~~l~~~fg~--------~~~~~~n~~eava~Gaa~~aa 940 (1304)
.+.|+|.||.+ .. |.+.+.|++.+.. ++....-.+.+.++|||..+.
T Consensus 238 p~~ivlgG~i~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~~ 294 (302)
T 3vov_A 238 PGVVVLGGGVALNAPEGYWEALLEAYRRYLQGWEAPPLRRARLGAEAGLLGAALTAY 294 (302)
T ss_dssp CSEEEEESHHHHTSCHHHHHHHHHHHHHTTTTSCCCCEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhHhhhhHHHHHHHHHHHHHhcchhcCCcEEEcCCCCcHHHHHHHHHHH
Confidence 36788888877 54 5555555554421 122334567799999998764
No 101
>4db3_A Glcnac kinase, N-acetyl-D-glucosamine kinase; structural genomics, center for structural genomics of infec diseases, csgid, transferase; 1.95A {Vibrio vulnificus}
Probab=93.95 E-value=2 Score=48.49 Aligned_cols=46 Identities=20% Similarity=0.171 Sum_probs=32.1
Q ss_pred ccEEEEEcCCCCchhHHHHHHHhcCCC---------CCCCCCchhHHHHHHHHHh
Q psy7140 365 IHSIEIVGGSSRIPAFKNVIESVFHKP---------PSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 365 i~~ViLvGG~sr~p~v~~~l~~~f~~~---------~~~~~np~eaVa~Gaa~~a 410 (1304)
.+.|+|-||.+..+.+.+.|++.+... +..+.-.+.+.++|||..+
T Consensus 270 p~~IvlgGgi~~~~~l~~~l~~~l~~~~~~~~~~~~i~~s~lg~~a~~~GAa~l~ 324 (327)
T 4db3_A 270 PHVVALGGGLSNFELIYEEMPKRVPKYLLSVAKCPKIIKAKHGDSGGVRGAAFLN 324 (327)
T ss_dssp CSEEEEESGGGGCTHHHHHHHHHGGGGSCTTCCCCEEEECSCGGGHHHHHHHHTT
T ss_pred CCEEEEeCcccchHHHHHHHHHHHHHHhccccCCCEEEECCCCCcHHHHHHHHHH
Confidence 468999999888877777777666421 1122345789999999865
No 102
>3hz6_A Xylulokinase; xylulose, structural genomic, chromob violaceum, manolate, transferase, structural genomi 2; HET: ADP XUL; 1.65A {Chromobacterium violaceum} PDB: 3kzb_A*
Probab=93.83 E-value=0.073 Score=64.44 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=57.3
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++. |++ + . ++.|.++||.++.|.+.+++.+.||.++.....+.|+.|+|||+.|
T Consensus 375 ~~~~l~RAvlEgia~~~~~~~~~-l~~-g---~-~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~~~e~~alGaA~lA 448 (511)
T 3hz6_A 375 TRAQILLAVLEGAALSLRWCAEL-LGM-E---K-VGLLKVVGGGARSEAWLRMIADNLNVSLLVKPDAHLHPLRGLAALA 448 (511)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HTG-G---G-CCEEEEESGGGGCHHHHHHHHHHHTCEEEECCCGGGHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-Hhc-C---C-CCEEEEeCchhcCHHHHHHHHHHHCCeeEEecCCCCchHHHHHHHH
Confidence 5666543 344444444444443 333 3 3 7899999999999999999999999887233458999999999999
Q ss_pred hHhcCC
Q psy7140 411 AILSPA 416 (1304)
Q Consensus 411 a~ls~~ 416 (1304)
+.-.+.
T Consensus 449 ~~a~G~ 454 (511)
T 3hz6_A 449 AVELEW 454 (511)
T ss_dssp HHHTTS
T ss_pred HHHhCC
Confidence 876654
No 103
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=93.78 E-value=0.051 Score=65.78 Aligned_cols=79 Identities=24% Similarity=0.354 Sum_probs=54.7
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHh
Q psy7140 861 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 861 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 939 (1304)
+|.++-. +++.+.-.+...++ .|++.+. .++.|.++||+++.|.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 5555432 23333333333332 3444454 46789999999999999999999999987664 45678999999999
Q ss_pred hHhcC
Q psy7140 940 AILSP 944 (1304)
Q Consensus 940 a~ls~ 944 (1304)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86544
No 104
>2itm_A Xylulose kinase, xylulokinase; ATPase, FGGY kinase, transferase; HET: XUL; 2.10A {Escherichia coli} PDB: 2nlx_A
Probab=93.71 E-value=0.055 Score=65.18 Aligned_cols=80 Identities=14% Similarity=0.204 Sum_probs=57.6
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
++.++-. +++-+.-.+...++. |++.+. .++.|.++||.++.+.+.+++.+.+|.++.....++.+.|+|||+.|
T Consensus 357 ~~~~~~rAvlEgia~~~~~~~~~-l~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~~~~e~~~alGAA~lA 432 (484)
T 2itm_A 357 GPNELARAVLEGVGYALADGMDV-VHACGI---KPQSVTLIGGGARSEYWRQMLADISGQQLDYRTGGDVGPALGAARLA 432 (484)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HHTTTC---CCSCEEEESGGGCCHHHHHHHHHHHCCCEEEESCTTSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHHcCC---CcceEEEEeccccCHHHHHHHHHHhCCeEEeCCCCCcccHHHHHHHH
Confidence 5655543 444455555555543 344343 46789999999999999999999999888776555556899999999
Q ss_pred hHhcC
Q psy7140 411 AILSP 415 (1304)
Q Consensus 411 a~ls~ 415 (1304)
+.-.+
T Consensus 433 ~~~~g 437 (484)
T 2itm_A 433 QIAAN 437 (484)
T ss_dssp HHHHC
T ss_pred HHHcC
Confidence 86554
No 105
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=93.62 E-value=12 Score=42.28 Aligned_cols=46 Identities=4% Similarity=0.007 Sum_probs=34.4
Q ss_pred ccceEEEeecCCCCHHHHHHHHHHHHHc-C--CCeEEeechhHHHHHHh
Q psy7140 166 KVHDCVLAVPSYFTNNERKALLTAASIA-G--LNVLRLINETTATALAY 211 (1304)
Q Consensus 166 ~~~~~vitVPa~~~~~qr~~l~~A~~~A-G--l~~~~li~Ep~AAal~y 211 (1304)
++..+.|++|...+......+.+..+.. | .-.+.+.|+..|||+++
T Consensus 70 ~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 70 PLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp CBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred ceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 5778999999999876655666666543 3 13468999999999884
No 106
>2zf5_O Glycerol kinase; hyperthermophilic archaeon, ATP-binding, GL metabolism, nucleotide-binding, transferase; 2.40A {Thermococcus kodakarensis}
Probab=93.59 E-value=0.09 Score=63.48 Aligned_cols=79 Identities=13% Similarity=0.145 Sum_probs=55.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++. |+..+ .++.|.++||.++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 365 ~~~~l~rAvlEgia~~~~~~l~~-l~~~~----~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 438 (497)
T 2zf5_O 365 GREHLARATLEAIAYLTRDVVDE-MEKLV----QIKELRVDGGATANDFLMQFQADILNRKVIRP-VVKETTALGAAYLA 438 (497)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHH-HTTTS----CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHH-HHhcC----CcceEEEeCccccCHHHHHHHHhhcCCeEEEc-CCCcchHHHHHHHH
Confidence 4555433 344444444444443 22222 57889999999999999999999999877654 34569999999999
Q ss_pred hHhcCC
Q psy7140 411 AILSPA 416 (1304)
Q Consensus 411 a~ls~~ 416 (1304)
+.-.+.
T Consensus 439 ~~~~g~ 444 (497)
T 2zf5_O 439 GLAVDY 444 (497)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 876553
No 107
>3ll3_A Gluconate kinase; xylulose kinase, nysgx, ATP, ADP, xylulose, transferase, structural genomics, PSI-2, protein structure initiative; HET: ATP DXP XUL ADP; 2.00A {Lactobacillus acidophilus} PDB: 3gbt_A*
Probab=93.53 E-value=0.083 Score=63.82 Aligned_cols=80 Identities=10% Similarity=0.128 Sum_probs=57.8
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 364 ~~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 438 (504)
T 3ll3_A 364 QKPEMARAVIEGIIFNLYDAAS-NLIKNTK---KPVAINATGGFLKSDFVRQLCANIFNVPIVTM-KEQQSGTLAAMFLA 438 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTSC---CCSEEEEESGGGCSHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEeCchhcCHHHHHHHHHhhCCeEEec-CCCCchhHHHHHHH
Confidence 5665543 34444444455444 3444443 57899999999999999999999999887653 45679999999999
Q ss_pred hHhcCC
Q psy7140 411 AILSPA 416 (1304)
Q Consensus 411 a~ls~~ 416 (1304)
+.-.+.
T Consensus 439 ~~a~G~ 444 (504)
T 3ll3_A 439 RQALGL 444 (504)
T ss_dssp HHHTTS
T ss_pred HHHcCc
Confidence 876554
No 108
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=93.45 E-value=0.5 Score=53.30 Aligned_cols=47 Identities=17% Similarity=0.097 Sum_probs=31.6
Q ss_pred ccEEEEEcCCCCc-hhHHHHHHHhcC----------CCCCCCCCchhHHHHHHHHHhh
Q psy7140 365 IHSIEIVGGSSRI-PAFKNVIESVFH----------KPPSTTLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 365 i~~ViLvGG~sr~-p~v~~~l~~~f~----------~~~~~~~np~eaVa~Gaa~~aa 411 (1304)
.+.|+|-||.++. +.+.+.|++.+. ..+..+...+.+.++|||.++.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 4689999998876 555555554432 1233445667899999998863
No 109
>3i8b_A Xylulose kinase; strain ATCC 15703 / DSM 20083, 11200J,, transferase, structural genomics, PSI-2; 2.00A {Bifidobacterium adolescentis ATCC15703}
Probab=93.23 E-value=0.071 Score=64.50 Aligned_cols=79 Identities=24% Similarity=0.354 Sum_probs=57.4
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++.|.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 395 ~~~~l~RAvlEgia~~~r~~l~-~l~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA 469 (515)
T 3i8b_A 395 TRENLARAFVEGLLCSQRDCLE-LIRSLGA---SITRILLIGGGAKSEAIRTLAPSILGMDVTRP-ATDEYVAIGAARQA 469 (515)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHH-HHHHTTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-CCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CCCEEEEECchhcCHHHHHHHHHHhCCceEec-CCcccHHHHHHHHH
Confidence 5666543 44445555555544 3444444 46789999999999999999999999877553 45679999999999
Q ss_pred hHhcC
Q psy7140 411 AILSP 415 (1304)
Q Consensus 411 a~ls~ 415 (1304)
+.-.+
T Consensus 470 ~~a~G 474 (515)
T 3i8b_A 470 AWVLS 474 (515)
T ss_dssp HHHHH
T ss_pred HHHcC
Confidence 86544
No 110
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=93.18 E-value=0.082 Score=64.96 Aligned_cols=77 Identities=9% Similarity=0.183 Sum_probs=55.3
Q ss_pred cHHHHHHHHHHHHHHHHHHHHHH---HHhcCCCCCceeEEEEecCCC-CChhHHHHHHHHcCCCCCCCCCchhHHHhHHH
Q psy7140 861 KRNDLETLCEHIFGRIEICLNKC---IAESKLPVNAIHSIEIVGGSS-RIPAFKNVIESVFHKPPSTTLNQDEAVSRGCA 936 (1304)
Q Consensus 861 tr~efe~l~~~~~~~i~~~i~~~---l~~~~~~~~~I~~V~LvGG~s-rip~v~~~l~~~fg~~~~~~~n~~eava~Gaa 936 (1304)
+|.+| +..+++.+.-.++.. |++.+ ..++.|.++||++ +.+.+.+++.+.||.++... .+.|+.|+|||
T Consensus 410 t~~~l---~RAvlEgia~~~r~~~~~l~~~g---~~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA 482 (572)
T 3jvp_A 410 KPEEI---YRALLEATAFGTRAIVDAFHGRG---VEVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAA 482 (572)
T ss_dssp CHHHH---HHHHHHHHHHHHHHHHHHHHTTT---CCEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHH
T ss_pred CHHHH---HHHHHHHHHHHHHHHHHHHHHcC---CCcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHH
Confidence 45544 444444443333333 33444 3578999999999 99999999999999988655 35789999999
Q ss_pred HHhhHhcC
Q psy7140 937 LQCAILSP 944 (1304)
Q Consensus 937 ~~aa~ls~ 944 (1304)
+.|+.-.+
T Consensus 483 ~lA~~a~G 490 (572)
T 3jvp_A 483 MFASVAAG 490 (572)
T ss_dssp HHHHHHHC
T ss_pred HHHHHhcC
Confidence 99986444
No 111
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=93.15 E-value=0.073 Score=64.33 Aligned_cols=82 Identities=10% Similarity=0.152 Sum_probs=56.3
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHh
Q psy7140 861 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 861 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 939 (1304)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+.+.+.+|.++... .+.|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 4555432 2333333333333332222454 36789999999999999999999999987654 46679999999999
Q ss_pred hHhcCCc
Q psy7140 940 AILSPAV 946 (1304)
Q Consensus 940 a~ls~~~ 946 (1304)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766654
No 112
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=93.02 E-value=0.13 Score=62.58 Aligned_cols=83 Identities=14% Similarity=0.154 Sum_probs=59.8
Q ss_pred EcHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHH
Q psy7140 331 LKRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQ 409 (1304)
Q Consensus 331 itr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~ 409 (1304)
-+|.++-. +++.+.-.+...++.+-+..+.. ++.|.++||+++.+.+.+++.+.||.++... ...|+.|+|||+.
T Consensus 371 ~~~~~i~RAvlEgia~~~r~~le~l~~~~g~~---~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~l 446 (526)
T 3ezw_A 371 VNANHIIRATLESIAYQTRDVLEAMQADSGIR---LHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYL 446 (526)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC---CSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC---CCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHH
Confidence 35555543 34444445555555444445543 6789999999999999999999999877654 4568899999999
Q ss_pred hhHhcCCc
Q psy7140 410 CAILSPAV 417 (1304)
Q Consensus 410 aa~ls~~~ 417 (1304)
|+.-.+.+
T Consensus 447 A~~a~G~~ 454 (526)
T 3ezw_A 447 AGLAVGFW 454 (526)
T ss_dssp HHHHTTSS
T ss_pred HHHHhCCC
Confidence 99766643
No 113
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=92.93 E-value=5.5 Score=44.83 Aligned_cols=67 Identities=15% Similarity=0.121 Sum_probs=47.1
Q ss_pred HHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc---CCCCCCC---CCchhHHHHHHHHHhhHhcC
Q psy7140 344 FGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPSTT---LNQDEAVSRGCALQCAILSP 415 (1304)
Q Consensus 344 ~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f---~~~~~~~---~np~eaVa~Gaa~~aa~ls~ 415 (1304)
.+.+...++++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+ .--|.++++|+|.+.....+
T Consensus 234 ~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 234 FAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 3445555566665554 468999999999999999999887 4333222 24578999999977655544
No 114
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=92.92 E-value=0.074 Score=64.35 Aligned_cols=53 Identities=19% Similarity=0.199 Sum_probs=44.9
Q ss_pred ceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCc
Q psy7140 893 AIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAV 946 (1304)
Q Consensus 893 ~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~ 946 (1304)
.++.|.++||+++.+.+.+.+.+.+|.++..... .|+.|+|||+.|+.-.+.+
T Consensus 400 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA~~a~G~~ 452 (508)
T 3ifr_A 400 APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVAAIGGGDD 452 (508)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHHHHHTCSS
T ss_pred CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHHHHHhCCC
Confidence 3678999999999999999999999998876644 5688999999998765543
No 115
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=92.79 E-value=0.065 Score=65.03 Aligned_cols=53 Identities=11% Similarity=0.043 Sum_probs=44.4
Q ss_pred ceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCc
Q psy7140 893 AIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAV 946 (1304)
Q Consensus 893 ~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~ 946 (1304)
.++.|.++||+++.|.+.+.+.+.+|.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 425 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~lA~~a~G~~ 477 (520)
T 4e1j_A 425 NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWLAGSRAGVW 477 (520)
T ss_dssp --CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHHHHHHcCCc
Confidence 46789999999999999999999999988764 456799999999998766554
No 116
>3ezw_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics, in SITU DATA collection, ATP-binding, kinase binding; 2.00A {Escherichia coli} PDB: 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.77 E-value=0.13 Score=62.63 Aligned_cols=67 Identities=13% Similarity=0.162 Sum_probs=51.2
Q ss_pred HHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCc
Q psy7140 876 IEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAV 946 (1304)
Q Consensus 876 i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~ 946 (1304)
+...++..-+..|. .++.|.++||+++.+.+.+.+.+.||.++.++ ...|+.|+|||+.|+.-.+.+
T Consensus 388 ~r~~le~l~~~~g~---~~~~i~v~GGgaks~~~~Qi~ADvlg~pV~~~-~~~E~~alGAA~lA~~a~G~~ 454 (526)
T 3ezw_A 388 TRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAVGFW 454 (526)
T ss_dssp HHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHTTSS
T ss_pred HHHHHHHHHHhcCC---CCCEEEEECchhhCHHHHHHHHHHHCCEEEeC-CCCchHHHHHHHHHHHHhCCC
Confidence 33333333334554 36789999999999999999999999988765 345789999999998766654
No 117
>4htl_A Beta-glucoside kinase; structural genomics, sugar kinase, ROK family, PSI-biology, center for structural genomics, MCSG, transferase; HET: MSE; 1.64A {Listeria monocytogenes}
Probab=92.77 E-value=6 Score=43.74 Aligned_cols=48 Identities=19% Similarity=0.171 Sum_probs=35.1
Q ss_pred eeEEEEecCCCCChhHHHHHHHHcCCC------CCCCCCchhHHHhHHHHHhhH
Q psy7140 894 IHSIEIVGGSSRIPAFKNVIESVFHKP------PSTTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 894 I~~V~LvGG~srip~v~~~l~~~fg~~------~~~~~n~~eava~Gaa~~aa~ 941 (1304)
.+.|+|.||.++.|.+.+.|++.+... +......+.+.++|||..+..
T Consensus 238 p~~IvlgGgi~~~~~~~~~l~~~l~~~~~~~~~i~~s~lg~~a~~~GAa~l~~~ 291 (297)
T 4htl_A 238 PTHIFIGGGITSRPTFIAELKHHMESFGLRDTIIETATHKNQAGLLGAVYHFLQ 291 (297)
T ss_dssp CSEEEEESGGGGSTTHHHHHHHHHTTTCCTTCEEEECSCTTTHHHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhccCCCeEEECCcCChHHHHhHHHHHHH
Confidence 368999999998888888888877422 222335567999999987753
No 118
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=92.74 E-value=0.086 Score=63.77 Aligned_cols=53 Identities=11% Similarity=0.141 Sum_probs=45.4
Q ss_pred ceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCc
Q psy7140 893 AIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAV 946 (1304)
Q Consensus 893 ~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~ 946 (1304)
.++.|.++||+++.+.+.+.+.+.+|.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 403 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 455 (506)
T 3h3n_X 403 DIPLLKVDGGAAKNDLLMQFQADILDIDVQRA-ANLETTALGAAYLAGLAVGFW 455 (506)
T ss_dssp CCCEEEEESGGGGCHHHHHHHHHHHTSEEEEC-SSSCHHHHHHHHHHHHHTTSS
T ss_pred CCCEEEEecccccCHHHHHHHHHHhCCeEEec-CCCcchhHHHHHHHHHHhCcc
Confidence 46789999999999999999999999988654 467799999999998766554
No 119
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=92.69 E-value=5 Score=44.91 Aligned_cols=48 Identities=23% Similarity=0.149 Sum_probs=32.3
Q ss_pred ccEEEEEcCCCC-chhHHHHHHHhcCC----------CCCCCCCchhHHHHHHHHHhhH
Q psy7140 365 IHSIEIVGGSSR-IPAFKNVIESVFHK----------PPSTTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 365 i~~ViLvGG~sr-~p~v~~~l~~~f~~----------~~~~~~np~eaVa~Gaa~~aa~ 412 (1304)
.+.|+|.||.+. .|.+.+.+++.+.. ++..+...+.+.++|||..+..
T Consensus 263 p~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 263 PDSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp CSEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CCEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 357999999886 57777766665531 1122335667899999998754
No 120
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=92.60 E-value=0.14 Score=61.85 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=54.5
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHh
Q psy7140 861 KRNDLE-TLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 861 tr~efe-~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 939 (1304)
+|.++- .+++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+.+.+.+|.++... .+.|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 455443 23333444444444332222343 35789999999999999999999999988655 45569999999999
Q ss_pred hHhcC
Q psy7140 940 AILSP 944 (1304)
Q Consensus 940 a~ls~ 944 (1304)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86544
No 121
>3g25_A Glycerol kinase; IDP00743, ATP-binding, glycerol metabolism, nucleotide-binding, transferase, struct genomics; HET: MSE; 1.90A {Staphylococcus aureus subsp} PDB: 3ge1_A*
Probab=92.44 E-value=0.11 Score=62.93 Aligned_cols=82 Identities=10% Similarity=0.152 Sum_probs=59.1
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++.+-+..+. .++.|.++||.++.+.+.+++.+.||.++... .+.|+.|+|||+.|
T Consensus 374 ~~~~l~RAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~aks~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~la 449 (501)
T 3g25_A 374 EKEHFIRATLESLCYQTRDVMEAMSKDSGI---DVQSLRVDGGAVKNNFIMQFQADIVNTSVERP-EIQETTALGAAFLA 449 (501)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHSSC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecchhcCHHHHHHHHHHhCCceEec-CCCcchHHHHHHHH
Confidence 4655443 4444555555555544333454 36789999999999999999999999877543 46789999999999
Q ss_pred hHhcCCc
Q psy7140 411 AILSPAV 417 (1304)
Q Consensus 411 a~ls~~~ 417 (1304)
+.-.+.+
T Consensus 450 ~~a~G~~ 456 (501)
T 3g25_A 450 GLAVGFW 456 (501)
T ss_dssp HHHTTSS
T ss_pred HHHhCcc
Confidence 8766543
No 122
>3jvp_A Ribulokinase; PSI-II, NYSGXRC, ribulose kinase, sugar kinase, crsytal structure, structural genomics, protein structure initiative; HET: 5RP; 2.31A {Bacillus halodurans} PDB: 3qdk_A*
Probab=92.39 E-value=0.11 Score=63.87 Aligned_cols=79 Identities=11% Similarity=0.184 Sum_probs=57.2
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCC-CchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHH
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSS-RIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQ 409 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-r~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~ 409 (1304)
+|.+|-. +++-+.-.+...++ .|++.+. .++.|.++||.+ +.+.+.+++.+.||.++... .+.|+.|+|||+.
T Consensus 410 t~~~l~RAvlEgia~~~r~~~~-~l~~~g~---~~~~i~~~GGga~ks~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~l 484 (572)
T 3jvp_A 410 KPEEIYRALLEATAFGTRAIVD-AFHGRGV---EVHELYACGGLPQKNHLLMQIFADVTNREIKVA-ASKQTPALGAAMF 484 (572)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHTTTC---CEEEEEEESSHHHHCHHHHHHHHHHHTSCEEEB-CCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHHcCC---CcCEEEEEcCchhhCHHHHHHHHHHHCCeeEec-CCCccHHHHHHHH
Confidence 5666543 33444444444444 3444443 578999999999 99999999999999887543 4578999999999
Q ss_pred hhHhcC
Q psy7140 410 CAILSP 415 (1304)
Q Consensus 410 aa~ls~ 415 (1304)
|+.-.+
T Consensus 485 A~~a~G 490 (572)
T 3jvp_A 485 ASVAAG 490 (572)
T ss_dssp HHHHHC
T ss_pred HHHhcC
Confidence 987555
No 123
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=92.28 E-value=0.086 Score=63.78 Aligned_cols=53 Identities=11% Similarity=0.162 Sum_probs=44.9
Q ss_pred ceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCCc
Q psy7140 893 AIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPAV 946 (1304)
Q Consensus 893 ~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~~ 946 (1304)
.++.|.++||+++.+.+.+++.+.+|.++... .+.|+.|+|||+.|+.-.+.+
T Consensus 401 ~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA~~a~G~~ 453 (510)
T 2p3r_A 401 RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLAGLAVGFW 453 (510)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHHHHHHTSS
T ss_pred CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHHHHHhCcc
Confidence 36789999999999999999999999988654 356799999999998755543
No 124
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=92.25 E-value=6.8 Score=43.06 Aligned_cols=48 Identities=15% Similarity=0.115 Sum_probs=31.0
Q ss_pred ccEEEEEcCCCCchhHHHHHHHhcC------------CCCCCCCCchhHHHHHHHHHhhH
Q psy7140 365 IHSIEIVGGSSRIPAFKNVIESVFH------------KPPSTTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 365 i~~ViLvGG~sr~p~v~~~l~~~f~------------~~~~~~~np~eaVa~Gaa~~aa~ 412 (1304)
.+.|+|.||.+..|.+.+.+++.+. .++..+.-.+.+.++|||..+..
T Consensus 228 p~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 228 PGVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp CSEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CCEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 3678999998776766666655442 11122334567899999988753
No 125
>3r8e_A Hypothetical sugar kinase; ribonuclease H-like motif, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.65A {Cytophaga hutchinsonii}
Probab=92.18 E-value=4.5 Score=45.28 Aligned_cols=47 Identities=17% Similarity=0.097 Sum_probs=31.6
Q ss_pred eeEEEEecCCCCC-hhHHHHHHHHcC----------CCCCCCCCchhHHHhHHHHHhh
Q psy7140 894 IHSIEIVGGSSRI-PAFKNVIESVFH----------KPPSTTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 894 I~~V~LvGG~sri-p~v~~~l~~~fg----------~~~~~~~n~~eava~Gaa~~aa 940 (1304)
.+.|+|.||.++. +.+.+.|++.+. .++......+.+.++|||..+.
T Consensus 261 P~~IvlgG~i~~~~~~l~~~l~~~l~~~~~~~~~~~~~i~~s~l~~~a~~~GAa~l~~ 318 (321)
T 3r8e_A 261 LNNILLGGGISGAFDYFVPNLKKAMLEHLPTYYTDDMYIGKATLENDAGLLGAAGLIM 318 (321)
T ss_dssp CCEEEEESGGGGGHHHHHHHHHHHHHHHSCHHHHTTCEEEECSSGGGHHHHHHHHHHH
T ss_pred CCEEEEeChhcccchHHHHHHHHHHHHhcccccCCCCEEEEcCCCCcHHHHHHHHHHH
Confidence 3789999998886 555555554431 1234445667899999998763
No 126
>2dpn_A Glycerol kinase; thermus thermophilus HB8, structural genomics, NPPSFA, national project on protein structural and functional analyses; 2.80A {Thermus thermophilus}
Probab=92.08 E-value=0.18 Score=60.81 Aligned_cols=80 Identities=15% Similarity=0.197 Sum_probs=57.7
Q ss_pred cHHHHH-HHHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLE-TLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe-~~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++- .+++-+.-++...++.+-+..+. .++.|.++||.++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 368 ~~~~~~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~n~~~~q~~Adv~g~pV~~~-~~~e~~alGaA~la 443 (495)
T 2dpn_A 368 SRAHLARAALEGVAFQVRDVVLAMEEEAGV---RLKVLKADGGMAQNRLFLKIQADLLGVPVAVP-EVTETTALGAALMA 443 (495)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTTSC---CCCCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCcEEEEecccccCHHHHHHHHHHhCCeeEec-CCcccHHHHHHHHH
Confidence 566543 35555555555655543333343 35789999999999999999999999877654 45669999999999
Q ss_pred hHhcC
Q psy7140 411 AILSP 415 (1304)
Q Consensus 411 a~ls~ 415 (1304)
+.-.+
T Consensus 444 ~~a~G 448 (495)
T 2dpn_A 444 GVGAG 448 (495)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 86554
No 127
>4e1j_A Glycerol kinase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, transferase; 2.33A {Sinorhizobium meliloti}
Probab=91.98 E-value=0.091 Score=63.71 Aligned_cols=82 Identities=10% Similarity=0.003 Sum_probs=55.5
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCC-CCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHH
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESK-LPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQ 409 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~-~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~ 409 (1304)
+|.++-. +++-+.-.+...++.+ ++.+ ... .++.|.++||.++.|.+.+++.+.+|.++... .+.|+.|+|||+.
T Consensus 393 ~~~~l~RAvlEgia~~~r~~l~~l-~~~~~~~g-~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~-~~~e~~alGAA~l 469 (520)
T 4e1j_A 393 GPAEFARAALEAVCYQTRDLLEAM-HKDWRRNG-NDTVLRVDGGMVASDWTMQRLSDLLDAPVDRP-VILETTALGVAWL 469 (520)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHH-HHHCC------CCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHH-HHhhccCC-CcceEEEeCccccCHHHHHHHHHHhCCeEEec-CCCccHHHHHHHH
Confidence 4665443 3444444455544433 3320 011 46789999999999999999999999887653 4577999999999
Q ss_pred hhHhcCC
Q psy7140 410 CAILSPA 416 (1304)
Q Consensus 410 aa~ls~~ 416 (1304)
|+.-.+.
T Consensus 470 A~~a~G~ 476 (520)
T 4e1j_A 470 AGSRAGV 476 (520)
T ss_dssp HHHHHTS
T ss_pred HHHHcCC
Confidence 9876554
No 128
>3h3n_X Glycerol kinase; ATP-binding, glycerol metabolism, nucleoti binding, phosphoprotein, transferase; 1.73A {Enterococcus casseliflavus} PDB: 3h3o_O 3flc_O 3h46_X 3h45_X 3d7e_O 1r59_O 1xup_O
Probab=91.96 E-value=0.22 Score=60.15 Aligned_cols=81 Identities=10% Similarity=0.132 Sum_probs=58.6
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++.+-+..+. .++.|.++||.++.+.+.+++.+.+|.++.. ..+.|+.|+|||+.|
T Consensus 373 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~-~~~~e~~alGaA~lA 448 (506)
T 3h3n_X 373 TKEDFVRATLQAVAYQSKDVIDTMKKDSGI---DIPLLKVDGGAAKNDLLMQFQADILDIDVQR-AANLETTALGAAYLA 448 (506)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCS---CCCEEEEESGGGGCHHHHHHHHHHHTSEEEE-CSSSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CCCEEEEecccccCHHHHHHHHHHhCCeEEe-cCCCcchhHHHHHHH
Confidence 5665543 4444555555555543333454 4678999999999999999999999987755 346789999999999
Q ss_pred hHhcCC
Q psy7140 411 AILSPA 416 (1304)
Q Consensus 411 a~ls~~ 416 (1304)
+.-.+.
T Consensus 449 ~~a~G~ 454 (506)
T 3h3n_X 449 GLAVGF 454 (506)
T ss_dssp HHHTTS
T ss_pred HHHhCc
Confidence 876654
No 129
>3ifr_A Carbohydrate kinase, FGGY; xylulose kinase, SGX, structural GENO 11200H, transferase, PSI-2; 2.30A {Rhodospirillum rubrum}
Probab=91.87 E-value=0.11 Score=62.86 Aligned_cols=80 Identities=18% Similarity=0.170 Sum_probs=57.6
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++ .|++.+. .++.|.++||.++.+.+.+++.+.||.++..... .|+.|+|||+.|
T Consensus 371 ~~~~l~rAvlEgia~~~~~~~~-~l~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~~~-~e~~alGaA~lA 445 (508)
T 3ifr_A 371 TRGHLWRALLEAVALAFRHHVA-VLDDIGH---APQRFFASDGGTRSRVWMGIMADVLQRPVQLLAN-PLGSAVGAAWVA 445 (508)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHH-HHHHHTC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEEEC-CSTHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHH-HHHhcCC---CCCEEEEeCCcccCHHHHHHHHHHhCCeEEecCC-CCchHHHHHHHH
Confidence 5666543 44445445555544 3344444 3678999999999999999999999988766543 568899999999
Q ss_pred hHhcCC
Q psy7140 411 AILSPA 416 (1304)
Q Consensus 411 a~ls~~ 416 (1304)
+.-.+.
T Consensus 446 ~~a~G~ 451 (508)
T 3ifr_A 446 AIGGGD 451 (508)
T ss_dssp HHHTCS
T ss_pred HHHhCC
Confidence 876653
No 130
>2qm1_A Glucokinase; alpha-beta structure, putative helix-turn-helix, structural PSI-2, protein structure initiative; HET: MSE; 2.02A {Enterococcus faecalis}
Probab=91.79 E-value=11 Score=41.98 Aligned_cols=47 Identities=23% Similarity=0.171 Sum_probs=32.0
Q ss_pred eEEEEecCCCC-ChhHHHHHHHHcCC----------CCCCCCCchhHHHhHHHHHhhH
Q psy7140 895 HSIEIVGGSSR-IPAFKNVIESVFHK----------PPSTTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 895 ~~V~LvGG~sr-ip~v~~~l~~~fg~----------~~~~~~n~~eava~Gaa~~aa~ 941 (1304)
+.|+|.||.++ .|.+.+.+++.+.. ++......+.+.++|||..+..
T Consensus 264 ~~IvlgGg~~~~~~~~~~~l~~~l~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~l~~~ 321 (326)
T 2qm1_A 264 DSVVIGGGVSAAGEFLRSRVEKYFQEFTFPQVRNSTKIKLAELGNEAGVIGAASLALQ 321 (326)
T ss_dssp SEEEEEESGGGGTHHHHHHHHHHHHHTSCHHHHTTSEEEECSSGGGHHHHHHHHHGGG
T ss_pred CEEEEcChhhhchHHHHHHHHHHHHHhhhhccCCCcEEEEcCcCchHHHHHHHHHHHH
Confidence 57999999886 57777777666521 1222335667899999988754
No 131
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=91.72 E-value=0.13 Score=62.21 Aligned_cols=81 Identities=14% Similarity=0.106 Sum_probs=55.6
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHh
Q psy7140 861 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 861 tr~efe~-l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~a 939 (1304)
+|.++-. +++.+.-.+...++..-+..+. .++.|.++||+++.+.+.+.+.+.+|.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 4444432 3333444444444333223453 35789999999999999999999999988655 45679999999999
Q ss_pred hHhcCC
Q psy7140 940 AILSPA 945 (1304)
Q Consensus 940 a~ls~~ 945 (1304)
+.-.+.
T Consensus 449 ~~~~G~ 454 (504)
T 2d4w_A 449 GIAVGF 454 (504)
T ss_dssp HHHHTS
T ss_pred HhhcCc
Confidence 865553
No 132
>2p3r_A Glycerol kinase; glycerol metabolism, allosteric regulation, microfluidics,; 2.00A {Escherichia coli} PDB: 3ezw_A 1gla_G 1bo5_O* 1bot_O 1glb_G* 1glc_G* 1gld_G* 1gle_G* 1glf_O* 1bu6_O 1bwf_Y* 1glj_Y* 1gll_Y*
Probab=91.69 E-value=0.11 Score=62.91 Aligned_cols=81 Identities=15% Similarity=0.162 Sum_probs=57.7
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++.+-+..+. .++.|.++||.++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 371 ~~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGga~s~~~~Qi~ADv~g~pV~~~-~~~e~~alGaA~lA 446 (510)
T 2p3r_A 371 NANHIIRATLESIAYQTRDVLEAMQADSGI---RLHALRVDGGAVANNFLMQFQSDILGTRVERP-EVREVTALGAAYLA 446 (510)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHCC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEEE-SCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccEEEEeCchhcCHHHHHHHHHHhCCceEec-CCCCcHHHHHHHHH
Confidence 5555543 4444555555555443333343 36789999999999999999999999877553 46779999999999
Q ss_pred hHhcCC
Q psy7140 411 AILSPA 416 (1304)
Q Consensus 411 a~ls~~ 416 (1304)
+.-.+.
T Consensus 447 ~~a~G~ 452 (510)
T 2p3r_A 447 GLAVGF 452 (510)
T ss_dssp HHHHTS
T ss_pred HHHhCc
Confidence 875553
No 133
>2d4w_A Glycerol kinase; alpha and beta protein, ribonuclease H-like motif, actin- like ATPase domain, transferase; 2.30A {Cellulomonas SP}
Probab=91.43 E-value=0.27 Score=59.39 Aligned_cols=80 Identities=14% Similarity=0.117 Sum_probs=58.4
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHh
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~a 410 (1304)
+|.++-. +++-+.-.+...++.+-+..+. .++.|.++||.++.+.+.+++.+.+|.++... .+.|+.|+|||+.|
T Consensus 373 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~i~~~GG~a~s~~~~Qi~Adv~g~pV~~~-~~~e~~alGaA~lA 448 (504)
T 2d4w_A 373 NRNHIARAALEATAFQSREVVDAMNADSGV---DLTELRVDGGMVANELLMQFQADQLGVDVVRP-KVAETTALGAAYAA 448 (504)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---CCCEEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CcceEEEeCCcccCHHHHHHHHHHhCCeEEeC-CCCcchHHHHHHHH
Confidence 5665543 4555555555555544333443 35789999999999999999999999877644 45679999999999
Q ss_pred hHhcC
Q psy7140 411 AILSP 415 (1304)
Q Consensus 411 a~ls~ 415 (1304)
+.-.+
T Consensus 449 ~~~~G 453 (504)
T 2d4w_A 449 GIAVG 453 (504)
T ss_dssp HHHHT
T ss_pred HhhcC
Confidence 87555
No 134
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=91.34 E-value=0.15 Score=61.58 Aligned_cols=50 Identities=16% Similarity=0.248 Sum_probs=43.0
Q ss_pred eEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhHhcCC
Q psy7140 895 HSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAILSPA 945 (1304)
Q Consensus 895 ~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ls~~ 945 (1304)
+.|.++||+++.+.+.+.+.+.+|.++... ...|+.|+|||+.|+.-.+.
T Consensus 409 ~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~la~~~~G~ 458 (503)
T 2w40_A 409 HVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVLAGLEVKI 458 (503)
T ss_dssp SCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHHHHHHTTC
T ss_pred ceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHHHHHHhCc
Confidence 679999999999999999999999988654 45568999999999876554
No 135
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=90.94 E-value=22 Score=39.20 Aligned_cols=64 Identities=6% Similarity=-0.017 Sum_probs=41.2
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCC--ChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhh
Q psy7140 868 LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSR--IPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 868 l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~sr--ip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa 940 (1304)
.+..++++....+-..+...-. . +.+.|+|.||.+. .|.+.+.+++.+- -|+.+.+.||+++|.
T Consensus 227 ~A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 227 EADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 3445555555555555543322 2 4578999998865 5777777777631 145778999999874
No 136
>3eno_A Putative O-sialoglycoprotein endopeptidase; hydrolase, metal-binding, metalloprotease, protease, zinc, keops complex, ATPase, metal ION binding; 3.02A {Thermoplasma acidophilum}
Probab=90.84 E-value=13 Score=41.62 Aligned_cols=68 Identities=15% Similarity=0.115 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc---CCCCCCC---CCchhHHHhHHHHHhhHhcC
Q psy7140 872 IFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPSTT---LNQDEAVSRGCALQCAILSP 944 (1304)
Q Consensus 872 ~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f---g~~~~~~---~n~~eava~Gaa~~aa~ls~ 944 (1304)
+.+.+.+.+.++++..+ ++.|+|+||.+....+++.|.+.+ |.++..+ .--|.+++.|+|.+.....+
T Consensus 233 l~~~l~~~~~~a~~~~g-----~~~vvlsGGVa~N~~L~~~L~~~l~~~g~~v~~p~~~~~~D~G~~iG~a~~~~~~~g 306 (334)
T 3eno_A 233 AFAMLVEVLERALYVSG-----KDEILMAGGVALNRRLRDMVTNMAREAGIRSYLTDREYCMDNGIMIAQAALLMYKSG 306 (334)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESSGGGCHHHHHHHHHHHHHHTSEEECCCTTTTSCCTHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHcC-----CCeEEEcCCHHHHHHHHHHHHHHHHHcCCEEEecCCCCCChHHHHHHHHHHHHHHcC
Confidence 44555566666666555 468999999999999999999887 5444332 24578899999876554433
No 137
>2w40_A Glycerol kinase, putative; closed conformation, malaria, transferase, sugar kinase/HSP70/actin superfamily, open conformation; 1.49A {Plasmodium falciparum} PDB: 2w41_A*
Probab=90.84 E-value=0.34 Score=58.47 Aligned_cols=81 Identities=15% Similarity=0.232 Sum_probs=57.8
Q ss_pred cHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcc-cEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHHH
Q psy7140 332 KRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAI-HSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQ 409 (1304)
Q Consensus 332 tr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i-~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~ 409 (1304)
+|.++-. +++-+.-.+...++.+-+..+. .+ +.|.++||.++.+.+.+++.+.+|.++... .+.|+.|+|||+.
T Consensus 376 ~~~~l~rAvlEgia~~~~~~~~~l~~~~g~---~~~~~i~~~GG~a~s~~~~Q~~Adv~g~pV~~~-~~~e~~alGaA~l 451 (503)
T 2w40_A 376 ERSHIVRALLEGIAFQLNEIVDSLTSDMGI---EMLHVLRCDGGMTKNKPFMQFNSDIINTKIEVS-KYKEVTSLGAAVL 451 (503)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---SCCSCEEEESGGGGCHHHHHHHHHHHTSCEEEE-SCSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHhcCC---CccceEEEeCccccCHHHHHHHHHHHCCeEEec-CCCcchHHHHHHH
Confidence 4555443 4555555555555544333343 35 679999999999999999999999877653 4566999999999
Q ss_pred hhHhcCC
Q psy7140 410 CAILSPA 416 (1304)
Q Consensus 410 aa~ls~~ 416 (1304)
|+.-.+.
T Consensus 452 a~~~~G~ 458 (503)
T 2w40_A 452 AGLEVKI 458 (503)
T ss_dssp HHHHTTC
T ss_pred HHHHhCc
Confidence 9876553
No 138
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=90.79 E-value=9.1 Score=41.42 Aligned_cols=44 Identities=20% Similarity=0.283 Sum_probs=28.0
Q ss_pred cCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCI 242 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 242 (1304)
.|++ +.+.|+..|||++....... ......++++-+|-| .-.++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~----~~~~~~~~~l~~GtG-IG~gi 157 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAG----AGVKGTVLVITLGTG-IGSAF 157 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTT----TTCCSEEEEEEESSS-EEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCC----CCCCCcEEEEEECcc-eEEEE
Confidence 3776 58999999999986443221 011235677788877 44454
No 139
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=90.66 E-value=0.18 Score=60.71 Aligned_cols=47 Identities=15% Similarity=0.100 Sum_probs=39.4
Q ss_pred ceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHHHhhH
Q psy7140 893 AIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 893 ~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~~aa~ 941 (1304)
.++.|.++||+++.+.+.+.+.+.+|.++.... .|+.++|||+.|+.
T Consensus 393 ~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~~A~~ 439 (489)
T 2uyt_A 393 DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIGIQLM 439 (489)
T ss_dssp CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHHHHHH
T ss_pred CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHHHHHH
Confidence 357899999999999999999999999886543 58999999655543
No 140
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=90.12 E-value=2.9 Score=50.20 Aligned_cols=74 Identities=15% Similarity=0.251 Sum_probs=44.8
Q ss_pred HHHHHHHcCCceeeeechhHHHHHHh-ccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCcH
Q psy7140 715 LLTAASIAGLNVLRLINETTATALAY-GIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGGR 793 (1304)
Q Consensus 715 l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG~ 793 (1304)
+..+-+..|+++ .+|+...=|.+.| |.... ++ .....+|+|+|||||.++++ .++.+.. ....++|..
T Consensus 102 l~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~-~~----~~~~~lviDIGGGStEl~~~--~~~~~~~---~~Sl~lG~v 170 (513)
T 1u6z_A 102 LKRAEKVIPYPI-EIISGNEEARLIFMGVEHT-QP----EKGRKLVIDIGGGSTELVIG--ENFEPIL---VESRRMGCV 170 (513)
T ss_dssp HHHHTTTCSSCE-EECCHHHHHHHHHHHHHHH-SC----CCSCEEEEEECSSCEEEEEE--ETTEEEE---EEEESCCHH
T ss_pred HHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhh-cc----CCCCEEEEEECCCcEEEEEE--eCCeeeE---EEEEeccHH
Confidence 334444569887 6666554444443 43322 21 11258999999999999986 3444432 223479988
Q ss_pred HHHHHH
Q psy7140 794 NIDKIL 799 (1304)
Q Consensus 794 ~~D~~l 799 (1304)
.+.+.+
T Consensus 171 rlte~f 176 (513)
T 1u6z_A 171 SFAQLY 176 (513)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 877765
No 141
>2uyt_A Rhamnulokinase; rhamnose degradation, IN-LINE phosphoryl transfer, hexokinas actin superfamily, L-rhamnulose kinase, rhamnose metabolism kinase; HET: LRH ADP; 1.55A {Escherichia coli} PDB: 2cgk_A 2cgj_A* 2cgl_A*
Probab=89.74 E-value=0.24 Score=59.58 Aligned_cols=78 Identities=12% Similarity=0.034 Sum_probs=54.6
Q ss_pred EEcHHHHHH-HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCCCCCCCCchhHHHHHHHH
Q psy7140 330 ELKRNDLET-LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCAL 408 (1304)
Q Consensus 330 ~itr~~fe~-~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~ 408 (1304)
.-+|.++-. +++-+.-.+...++.+-+..+. .++.|.++||.++.+.+.+++.+.+|.++.... .|+.|+|||+
T Consensus 361 ~~t~~~l~RAvlEgia~~~r~~~~~l~~~~g~---~~~~i~~~GGgaks~~~~Qi~ADvlg~pV~~~~--~e~~alGaa~ 435 (489)
T 2uyt_A 361 PESDAELARCIFDSLALLYADVLHELAQLRGE---DFSQLHIVGGGCQNTLLNQLCADACGIRVIAGP--VEASTLGNIG 435 (489)
T ss_dssp CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHTC---CCSEEEEESGGGGCHHHHHHHHHHHTSEEEECC--TTHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCC---CCCEEEEeCChhhhHHHHHHHHHHHCCeeecCC--ccHhHHHHHH
Confidence 446666553 4445555555555543222343 357899999999999999999999998876443 6899999966
Q ss_pred HhhH
Q psy7140 409 QCAI 412 (1304)
Q Consensus 409 ~aa~ 412 (1304)
.|+.
T Consensus 436 ~A~~ 439 (489)
T 2uyt_A 436 IQLM 439 (489)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 6544
No 142
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=89.44 E-value=4.7 Score=44.94 Aligned_cols=78 Identities=15% Similarity=0.195 Sum_probs=46.9
Q ss_pred HHHHHHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcc
Q psy7140 183 RKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIG 262 (1304)
Q Consensus 183 r~~l~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG 262 (1304)
...+.++-+..|+++.-+=.|-+|...+.+.... ++. .....+|+|+|||+|.+++++ ++.+.... ..++|
T Consensus 92 ~~fl~~i~~~tG~~i~vIsG~eEA~l~~~gv~~~-~~~---~~~~~lviDIGGGStEl~~~~--~~~~~~~~---Sl~lG 162 (315)
T 3mdq_A 92 QVLIDRIKKEVNIDVEVIDGAREAELIFRGVQQA-VPM---EDHISLAMDIGGGSVEFIIGN--KNEILWKQ---SFEIG 162 (315)
T ss_dssp HHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHHH-SCC---TTCCEEEEEECSSCEEEEEEC--SSCEEEEE---EESCC
T ss_pred HHHHHHHHHHHCCCeEEeCHHHHHHHHHHHHHhc-CCC---CCCCEEEEEeCCCceEEEEEE--CCeEeeeE---EEech
Confidence 4445666667899885444555554444444332 111 124578999999999999865 44443322 34788
Q ss_pred cHHHHHH
Q psy7140 263 GRNIDKI 269 (1304)
Q Consensus 263 G~~~D~~ 269 (1304)
.-.+.+.
T Consensus 163 ~vrl~e~ 169 (315)
T 3mdq_A 163 GQRLIDR 169 (315)
T ss_dssp HHHHHHH
T ss_pred hhHHHHH
Confidence 7766554
No 143
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=89.31 E-value=6.6 Score=45.12 Aligned_cols=47 Identities=21% Similarity=0.185 Sum_probs=29.9
Q ss_pred ccEEEEEcCCCCc-hhHHHHHHHhcCC--------CCCCCCCchhHHHHHHHHHhh
Q psy7140 365 IHSIEIVGGSSRI-PAFKNVIESVFHK--------PPSTTLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 365 i~~ViLvGG~sr~-p~v~~~l~~~f~~--------~~~~~~np~eaVa~Gaa~~aa 411 (1304)
.+.|+|.||.+.. |.+.+.+++.+.. ++..+.-.+.+.++|||..+.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 4678999988764 6666666655421 112223445689999998764
No 144
>2p32_A Heat shock 70 kDa protein A; three-helix bundle, chaperone; 3.20A {Caenorhabditis elegans}
Probab=89.26 E-value=0.71 Score=43.53 Aligned_cols=78 Identities=10% Similarity=0.190 Sum_probs=59.2
Q ss_pred hccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHH
Q psy7140 1181 YAMRPNILEEYKHSVQSAKNIVDAAFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREE 1260 (1304)
Q Consensus 1181 ~~~rp~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k 1260 (1304)
..++-++-..+.+++..+++.|.. +..-..+++++++.|.+.|+++..||+.. +. -...+|+.+
T Consensus 13 ~re~iEarN~aEsliy~~e~~L~e----~~~~dkl~~eek~~I~~~i~el~~~L~~~---~~---------ad~e~ik~k 76 (120)
T 2p32_A 13 GLVPRGSHMGLESYAFNLKQTIED----EKLKDKISPEDKKKIEDKCDEILKWLDSN---QT---------AEKEEFEHQ 76 (120)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHTC----TTTGGGSCHHHHHHHHHHHHHHHHHHHHH---TT---------CCHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHhc----hhhhccCCHHHHHHHHHHHHHHHHHHHcC---Cc---------CCHHHHHHH
Confidence 345667777888888888886632 01124699999999999999999999741 11 124789999
Q ss_pred HHHHHHHHHHhhcC
Q psy7140 1261 KYKFEKSVWSVLNK 1274 (1304)
Q Consensus 1261 ~~~l~~~~~~l~~k 1274 (1304)
.+.|+..+.+|..+
T Consensus 77 ~~eL~~~~~~i~~k 90 (120)
T 2p32_A 77 QKDLEGLANPIISK 90 (120)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999999865
No 145
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=88.85 E-value=20 Score=40.05 Aligned_cols=44 Identities=16% Similarity=0.060 Sum_probs=28.3
Q ss_pred cCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEE
Q psy7140 722 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 722 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 772 (1304)
.|++ +.+.|+..|+|++-..... ....++++++-+|.| .-.+++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~-----~~~~~~~v~l~~GtG-iG~giv 163 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDE-----FTQYPLVMGLILGTG-VGGGLV 163 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTT-----GGGCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCc-----CCCCCcEEEEEECCc-EEEEEE
Confidence 3665 6899999999987533221 122467888888887 334443
No 146
>2ap1_A Putative regulator protein; zinc binding protein, structural genomics, PSI, protein STRU initiative; 1.90A {Salmonella typhimurium} SCOP: c.55.1.10 c.55.1.10
Probab=88.59 E-value=20 Score=40.00 Aligned_cols=43 Identities=16% Similarity=0.061 Sum_probs=27.8
Q ss_pred cCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCI 242 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 242 (1304)
.|++ +.+.|+..|||++....... .....++++-+|.| .-.++
T Consensus 120 ~~~p-v~v~NDa~aaalgE~~~g~~-----~~~~~~v~l~~GtG-iG~gi 162 (327)
T 2ap1_A 120 LDRD-VRLDNDANCFALSEAWDDEF-----TQYPLVMGLILGTG-VGGGL 162 (327)
T ss_dssp HTSC-EEEEEHHHHHHHHHHTSTTG-----GGCSEEEEEEESSS-EEEEE
T ss_pred HCCC-EEEecHHHHHHHHHHHhCcC-----CCCCcEEEEEECCc-EEEEE
Confidence 3776 68999999999875432211 12356777888887 33444
No 147
>2gup_A ROK family protein; sugar kinase, streptococcus pneumoniae TIGR4, AP sucrose, structural genomics, PSI; HET: SUC; 2.01A {Streptococcus pneumoniae} SCOP: c.55.1.10 c.55.1.10
Probab=88.29 E-value=33 Score=37.43 Aligned_cols=47 Identities=15% Similarity=0.135 Sum_probs=30.7
Q ss_pred eEEEEecCCCCChhHHHHHHHHcC------------CCCCCCCCchhHHHhHHHHHhhH
Q psy7140 895 HSIEIVGGSSRIPAFKNVIESVFH------------KPPSTTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 895 ~~V~LvGG~srip~v~~~l~~~fg------------~~~~~~~n~~eava~Gaa~~aa~ 941 (1304)
+.|+|.||.+..|.+.+.+++.+. .++....-.+.+.++|||..+..
T Consensus 229 ~~IvlgG~i~~~~~~~~~l~~~l~~~~~~~~~~~~~~~i~~~~~~~~a~~~GAa~~~~~ 287 (292)
T 2gup_A 229 GVISLGGSISQNPDFIQGVKKAVEDFVDAYEEYTVAPVIQACTYHADANLYGALVNWLQ 287 (292)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHHHHHHHHCTTCCSCCCEEECSCSTTHHHHHHHHHHHH
T ss_pred CEEEEeCccccchHHHHHHHHHHHHhhcccccccCCCeEEEcccCChhhHHHHHHHHHH
Confidence 678999998877766666665541 11222234567899999987754
No 148
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=87.22 E-value=1.7 Score=49.21 Aligned_cols=82 Identities=17% Similarity=0.201 Sum_probs=48.3
Q ss_pred HHHHHHHHHHcCCCeEEeechhHHHHHHh-hhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEE--EC--CeEEEEEEec
Q psy7140 183 RKALLTAASIAGLNVLRLINETTATALAY-GIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAF--VK--GKLKVLSNVC 257 (1304)
Q Consensus 183 r~~l~~A~~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~--~~--~~~~v~~~~~ 257 (1304)
...+.++-+..|+++ .+|+-.+=|.+.| +... .++.. .....++|+|+|||+|+++++.- .. +.+.. ..
T Consensus 105 ~~fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~-~~~~~-~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~~---~~ 178 (343)
T 3cer_A 105 EEFEDEIERILGVRP-EVIPGTEEADLSFLGATS-VVNRD-DLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQG---AF 178 (343)
T ss_dssp HHHHHHHHHHHSSCC-EECCHHHHHHHHHHHHHS-SCCTT-TCCSSEEEEEECSSCEEEEECCCSSSSCTTSCSE---EE
T ss_pred HHHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHh-hCccc-cccCCEEEEEeCCCceEEEEeecCccCcccccce---eE
Confidence 345556666679987 5666655555555 3322 22210 12234789999999999998653 11 11111 12
Q ss_pred CCCcccHHHHHHH
Q psy7140 258 DSEIGGRNIDKIL 270 (1304)
Q Consensus 258 ~~~lGG~~~D~~l 270 (1304)
..++|+..+.+.+
T Consensus 179 SlplG~v~lt~~~ 191 (343)
T 3cer_A 179 SMNIGSVRMTERH 191 (343)
T ss_dssp EESCCHHHHHHHT
T ss_pred EEehhHHHHHHHh
Confidence 3479988887765
No 149
>1ud0_A HSC70, 70 kDa heat-shock-like protein; chaperone; 3.45A {Rattus norvegicus} SCOP: a.8.4.1
Probab=86.89 E-value=1.4 Score=40.89 Aligned_cols=73 Identities=10% Similarity=0.222 Sum_probs=53.6
Q ss_pred hHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHHHHH
Q psy7140 1186 NILEEYKHSVQSAKNIVDAAFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKYKFE 1265 (1304)
Q Consensus 1186 ~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~ 1265 (1304)
++-..+.+++..+++.+.. ++.-..+++++++.|.+.|+++..||+.... -...+|+.+.+.|+
T Consensus 4 EarN~aE~~iy~~e~~L~~----~e~~~kl~~~ek~~i~~~i~~l~~~L~~~~~------------ad~~~i~~~~~~L~ 67 (113)
T 1ud0_A 4 RGSHMLESYAFNMKATVED----EKLQGKINDEDKQKILDKCNEIISWLDKNQT------------AEKEEFEHQQKELE 67 (113)
T ss_dssp CCHHHHHHHHHHHHHHHTS----GGGTTTSCHHHHHHHHHHHHHHHHHHHHHHH------------HHHHHHHHHTHHHH
T ss_pred HHHHHHHHHHHHHHHHhcc----hhhhccCCHHHHHHHHHHHHHHHHHHHcCCc------------cCHHHHHHHHHHHH
Confidence 3446677777777776631 0112469999999999999999999974211 01368999999999
Q ss_pred HHHHHhhcC
Q psy7140 1266 KSVWSVLNK 1274 (1304)
Q Consensus 1266 ~~~~~l~~k 1274 (1304)
..+.+|..+
T Consensus 68 ~~~~~i~~~ 76 (113)
T 1ud0_A 68 KVCNPIITK 76 (113)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999998854
No 150
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=86.12 E-value=4.3 Score=43.55 Aligned_cols=21 Identities=19% Similarity=0.393 Sum_probs=18.1
Q ss_pred cEEEEEcCcccEEEEEEeCCc
Q psy7140 2 SVIGIDFGTESCYLSVAKSGG 22 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (1304)
..++||.|+|+++.+++.+++
T Consensus 4 M~L~IDIGNT~ik~gl~~~~~ 24 (249)
T 3bex_A 4 MYLLVDVGNTHSVFSITEDGK 24 (249)
T ss_dssp EEEEEEECSSEEEEEEESSSS
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 579999999999999987553
No 151
>2ch5_A NAGK protein; transferase, N-acetylglucosamine, glcnac, sugar kinase, RIBO H fold, sugar kinase/HSP70/actin superfamily, domain rotati conformation; HET: NAG NDG; 1.9A {Homo sapiens} SCOP: c.55.1.5 c.55.1.5 PDB: 2ch6_A*
Probab=85.32 E-value=52 Score=36.78 Aligned_cols=68 Identities=3% Similarity=0.015 Sum_probs=43.7
Q ss_pred HHHHHHHHHHHHHHHHHhh-h-cc-ccceEEEeecCCCCHHHHHHHHHHHHHc-C--CceeeeechhHHHHHHh
Q psy7140 673 PEQLTAMLFTKLKDISENE-I-QN-KVHDCVLAVPSYFTNNERKALLTAASIA-G--LNVLRLINETTATALAY 740 (1304)
Q Consensus 673 ~eel~a~~L~~l~~~a~~~-~-~~-~~~~~VitVP~~f~~~qr~~l~~Aa~~A-G--l~~~~li~Ep~Aaal~y 740 (1304)
++++...+...+.+..+.. . .. ++..+.|++|...+......+.+..+.. | .-.+.+.|+..|||+++
T Consensus 45 ~~~~~~~i~~~i~~~~~~~~~~~~~~i~gigi~~pG~vd~~~~~~l~~~l~~~~~~~~~pv~v~NDa~aaa~a~ 118 (347)
T 2ch5_A 45 TDKCVERINEMVNRAKRKAGVDPLVPLRSLGLSLSGGDQEDAGRILIEELRDRFPYLSESYLITTDAAGSIATA 118 (347)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCCTTCCBSEEEEEETTTTCHHHHHHHHHHHHHHCTTSBSCEEEEEHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCCCcccceeEEEEeccCCCchHHHHHHHHHHHHhcCCCCceEEEECcHHHHHHhh
Confidence 3445555555554444332 1 12 5778999999999876655666665543 3 13568999999999884
No 152
>3mdq_A Exopolyphosphatase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, hydrol; HET: MSE; 1.50A {Cytophaga hutchinsonii}
Probab=85.09 E-value=1.7 Score=48.71 Aligned_cols=76 Identities=17% Similarity=0.265 Sum_probs=45.4
Q ss_pred HHHHHHHHcCCceeeeec-hhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCCc
Q psy7140 714 ALLTAASIAGLNVLRLIN-ETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIGG 792 (1304)
Q Consensus 714 ~l~~Aa~~AGl~~~~li~-Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lGG 792 (1304)
.+..+-+..|+++ .+|+ |-+|.-.+.|.... ++ ......+|+|+|||||.+++++ ++.+.. ....++|.
T Consensus 94 fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~-~~---~~~~~~lviDIGGGStEl~~~~--~~~~~~---~~Sl~lG~ 163 (315)
T 3mdq_A 94 LIDRIKKEVNIDV-EVIDGAREAELIFRGVQQA-VP---MEDHISLAMDIGGGSVEFIIGN--KNEILW---KQSFEIGG 163 (315)
T ss_dssp HHHHHHHHHCCCE-EECCHHHHHHHHHHHHHHH-SC---CTTCCEEEEEECSSCEEEEEEC--SSCEEE---EEEESCCH
T ss_pred HHHHHHHHHCCCe-EEeCHHHHHHHHHHHHHhc-CC---CCCCCEEEEEeCCCceEEEEEE--CCeEee---eEEEechh
Confidence 3444555679987 5555 55554444443321 11 1235689999999999999975 333322 22347888
Q ss_pred HHHHHHH
Q psy7140 793 RNIDKIL 799 (1304)
Q Consensus 793 ~~~D~~l 799 (1304)
..+.+.+
T Consensus 164 vrl~e~f 170 (315)
T 3mdq_A 164 QRLIDRF 170 (315)
T ss_dssp HHHHHHS
T ss_pred hHHHHHh
Confidence 7766543
No 153
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=83.64 E-value=0.67 Score=55.33 Aligned_cols=72 Identities=11% Similarity=-0.017 Sum_probs=53.6
Q ss_pred HHHHHHHHHH--HHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHH-cCCCCCCCCCchhHHHhHHHHHhhHh
Q psy7140 866 ETLCEHIFGR--IEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESV-FHKPPSTTLNQDEAVSRGCALQCAIL 942 (1304)
Q Consensus 866 e~l~~~~~~~--i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~-fg~~~~~~~n~~eava~Gaa~~aa~l 942 (1304)
..+...+++. +.-.++.+++...- .+.|.++||+++.|...+.+.+. ||.++.++. ..|+.|+|||+.|+.-
T Consensus 362 ~~l~RA~lE~~Gia~~~r~~l~~~~~----~~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 362 DWFERRAAACLYAALVADTALDLIGS----TGRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHTTC----CSEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHhcC----CCeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 4555555553 44455555554432 26899999999999999999999 999887664 4568899999999753
No 154
>1u6z_A Exopolyphosphatase; alpha/beta protein, askha (acetate and sugar kinases, HSC70, superfamily; 1.90A {Escherichia coli} SCOP: a.211.1.5 c.55.1.8 c.55.1.8 PDB: 2flo_A*
Probab=81.81 E-value=5.3 Score=47.86 Aligned_cols=76 Identities=14% Similarity=0.256 Sum_probs=46.8
Q ss_pred HHHHHHHHHcCCCeEEeechhHHHHHHh-hhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCcc
Q psy7140 184 KALLTAASIAGLNVLRLINETTATALAY-GIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIG 262 (1304)
Q Consensus 184 ~~l~~A~~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~lG 262 (1304)
..+.++-+..|+++ .+|+..+=|.+.| |.... ++. ....+|+|+|||+|.+++. .++.+.... ..++|
T Consensus 100 ~fl~~i~~~tG~~i-~vIsG~eEA~l~~~gv~~~-~~~----~~~~lviDIGGGStEl~~~--~~~~~~~~~---Sl~lG 168 (513)
T 1u6z_A 100 DFLKRAEKVIPYPI-EIISGNEEARLIFMGVEHT-QPE----KGRKLVIDIGGGSTELVIG--ENFEPILVE---SRRMG 168 (513)
T ss_dssp HHHHHHTTTCSSCE-EECCHHHHHHHHHHHHHHH-SCC----CSCEEEEEECSSCEEEEEE--ETTEEEEEE---EESCC
T ss_pred HHHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhh-ccC----CCCEEEEEECCCcEEEEEE--eCCeeeEEE---EEecc
Confidence 34555555679987 5666555555555 44332 111 1147899999999999985 455543322 34899
Q ss_pred cHHHHHHH
Q psy7140 263 GRNIDKIL 270 (1304)
Q Consensus 263 G~~~D~~l 270 (1304)
.-.+.+.+
T Consensus 169 ~vrlte~f 176 (513)
T 1u6z_A 169 CVSFAQLY 176 (513)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 88777655
No 155
>3cer_A Possible exopolyphosphatase-like protein; NESG, BLR13, Q8G5J2, X-RAY, structure, structural genomics, PSI-2; 2.40A {Bifidobacterium longum NCC2705}
Probab=80.58 E-value=4.9 Score=45.41 Aligned_cols=80 Identities=18% Similarity=0.221 Sum_probs=46.5
Q ss_pred HHHHHHHHcCCceeeeechhHHHHHHh-ccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEE--EC--CeEEEEEEecCC
Q psy7140 714 ALLTAASIAGLNVLRLINETTATALAY-GIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAF--VK--GKLKVLSNVCDS 788 (1304)
Q Consensus 714 ~l~~Aa~~AGl~~~~li~Ep~Aaal~y-~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~--~~--~~~~v~~~~~~~ 788 (1304)
.+..+-+..|+++ .+|+..+=|.+.| |.... ++. ......++++|+|||||+++++.- .. +.+. .....
T Consensus 107 fl~~v~~~tGi~i-eVIsG~eEA~l~~~gv~~~-~~~-~~~~~~~lviDIGGGStel~~~~~~~~~~~~~~~---~~~Sl 180 (343)
T 3cer_A 107 FEDEIERILGVRP-EVIPGTEEADLSFLGATSV-VNR-DDLPAPYLVVDLGGGSTELVIGGDGVSAPTTQVQ---GAFSM 180 (343)
T ss_dssp HHHHHHHHHSSCC-EECCHHHHHHHHHHHHHSS-CCT-TTCCSSEEEEEECSSCEEEEECCCSSSSCTTSCS---EEEEE
T ss_pred HHHHHHHHHCCCE-EEeCHHHHHHHHHHHHHhh-Ccc-ccccCCEEEEEeCCCceEEEEeecCccCcccccc---eeEEE
Confidence 3444445579987 6666554444444 43221 211 012345999999999999998753 11 1111 12234
Q ss_pred CCCcHHHHHHH
Q psy7140 789 EIGGRNIDKIL 799 (1304)
Q Consensus 789 ~lGG~~~D~~l 799 (1304)
++|+..+.+.+
T Consensus 181 plG~v~lt~~~ 191 (343)
T 3cer_A 181 NIGSVRMTERH 191 (343)
T ss_dssp SCCHHHHHHHT
T ss_pred ehhHHHHHHHh
Confidence 79998887765
No 156
>3h6e_A Carbohydrate kinase, FGGY; novosphingobium aromaticivorans,strain 12444, SGX, transferase; 2.50A {Novosphingobium aromaticivorans}
Probab=79.84 E-value=1 Score=53.71 Aligned_cols=47 Identities=17% Similarity=0.028 Sum_probs=40.7
Q ss_pred cEEEEEcCCCCchhHHHHHHHh-cCCCCCCCCCchhHHHHHHHHHhhHh
Q psy7140 366 HSIEIVGGSSRIPAFKNVIESV-FHKPPSTTLNQDEAVSRGCALQCAIL 413 (1304)
Q Consensus 366 ~~ViLvGG~sr~p~v~~~l~~~-f~~~~~~~~np~eaVa~Gaa~~aa~l 413 (1304)
+.|.++||.++.|...+++.+. ||.++.... ..|+.|+|||+.|+.-
T Consensus 389 ~~i~~~GG~a~s~~w~Qi~ADv~~g~pV~~~~-~~e~~alGAA~lA~~a 436 (482)
T 3h6e_A 389 GRILVEGRFAEADVFVRALASLRPDCAVYTAN-AHNDVSFGALRLIDPG 436 (482)
T ss_dssp SEEEEESGGGGCHHHHHHHHHHSTTSEEEEES-SCCCTTGGGHHHHCTT
T ss_pred CeEEEeCCcccCHHHHHHHhhhcCCCeEEEcC-CCchHHHHHHHHhCcc
Confidence 6899999999999999999999 998876654 4568899999999854
No 157
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=78.80 E-value=8.6 Score=45.94 Aligned_cols=74 Identities=12% Similarity=0.127 Sum_probs=45.4
Q ss_pred HHHHHHHHHHcCCCeEEeechhHHHHHHh-hhhcCCCCCCCCCCcEEEEEEecCCeEEEEEEEEECCeEEEEEEecCCCc
Q psy7140 183 RKALLTAASIAGLNVLRLINETTATALAY-GIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEI 261 (1304)
Q Consensus 183 r~~l~~A~~~AGl~~~~li~Ep~AAal~y-~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~~~~~~~~~v~~~~~~~~l 261 (1304)
...+.++-+..|+++ .+|+-.+=|.+.| +.... ++ ....+|+|+|||+|.+++++ ++.+... ...++
T Consensus 103 ~~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~-----~~~~lvvDIGGGStEl~~~~--~~~~~~~---~Sl~l 170 (508)
T 3hi0_A 103 PDFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY-----QPDGIAGDLGGGSLELIDIK--DKSCGEG---ITLPL 170 (508)
T ss_dssp HHHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS-----SCEEEEEEECSSCEEEEEEE--TTEECCC---EEESC
T ss_pred HHHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC-----CCCeEEEEeCCCceEEEEee--CCeeeeE---EEecc
Confidence 455666666789988 5555554444444 44332 11 12348999999999999865 5544322 23478
Q ss_pred ccHHHHH
Q psy7140 262 GGRNIDK 268 (1304)
Q Consensus 262 GG~~~D~ 268 (1304)
|.-.+.+
T Consensus 171 G~vrl~e 177 (508)
T 3hi0_A 171 GGLRLSE 177 (508)
T ss_dssp CHHHHHH
T ss_pred eEEehhh
Confidence 8776664
No 158
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=72.95 E-value=2.3 Score=38.24 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=18.4
Q ss_pred CcEEEEEcCcccEEEEEEeCC
Q psy7140 1 MSVIGIDFGTESCYLSVAKSG 21 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~~g 21 (1304)
|.++|||+|+..+.||+.+..
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 789999999999999986543
No 159
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=69.76 E-value=76 Score=38.03 Aligned_cols=65 Identities=14% Similarity=0.079 Sum_probs=46.7
Q ss_pred HHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCC-CCC-CCCCchhHHHHHHHHHhhHhcCC
Q psy7140 347 IEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHK-PPS-TTLNQDEAVSRGCALQCAILSPA 416 (1304)
Q Consensus 347 i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~-~~~-~~~np~eaVa~Gaa~~aa~ls~~ 416 (1304)
+...+.++.++.+ ++.|+|.||.+....+++.|.+..+. .+. ...--|.++++|+|+++....+.
T Consensus 295 L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 295 VFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 4445555555544 57899999999999999999876543 222 22355889999999999876543
No 160
>3epq_A Putative fructokinase; SCRK, ADP binding, PSI2, MCSG, structural GENO protein structure initiative, midwest center for structural genomics; HET: MLY MSE MLZ ADP; 1.66A {Bacillus subtilis} PDB: 1xc3_A 3ohr_A* 3lm9_A*
Probab=66.55 E-value=23 Score=39.08 Aligned_cols=43 Identities=9% Similarity=0.183 Sum_probs=27.9
Q ss_pred cCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCI 242 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 242 (1304)
.|++ +.+.|+..|||++-...... ...++++++-+|-| .-.++
T Consensus 97 ~~~p-V~v~NDanaaalaE~~~G~~-----~~~~~~~~l~~GtG-iG~gi 139 (302)
T 3epq_A 97 MXIP-VGFSTDVNAAALGEFLFGEA-----XGLDSCLYITIGTG-IGAGA 139 (302)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT-----TTCSCEEEEEESSS-EEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC-----CCCCcEEEEEECCc-eEEEE
Confidence 3777 58999999999986543221 12345777788866 33444
No 161
>3hi0_A Putative exopolyphosphatase; 17739545, structural genomics, center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 2.30A {Agrobacterium tumefaciens str}
Probab=65.78 E-value=12 Score=44.55 Aligned_cols=74 Identities=16% Similarity=0.166 Sum_probs=44.3
Q ss_pred HHHHHHHHHcCCceeeeech-hHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEEEECCeEEEEEEecCCCCC
Q psy7140 713 KALLTAASIAGLNVLRLINE-TTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAAFVKGKLKVLSNVCDSEIG 791 (1304)
Q Consensus 713 ~~l~~Aa~~AGl~~~~li~E-p~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~~~~~~~~v~~~~~~~~lG 791 (1304)
..+..+-+..|+++ .+|+. -+|.-.+.|.... ++ ....+|+|+|||||.+++++ ++.+.. ....++|
T Consensus 104 ~fl~~i~~~tG~~i-evIsG~EEA~l~~~gv~~~-~~-----~~~~lvvDIGGGStEl~~~~--~~~~~~---~~Sl~lG 171 (508)
T 3hi0_A 104 DFIREAEAILGCEI-EVLSGEKEALYSAYGVISG-FY-----QPDGIAGDLGGGSLELIDIK--DKSCGE---GITLPLG 171 (508)
T ss_dssp HHHHHHHHHHTSCE-EECCHHHHHHHHHHHHHHH-SS-----SCEEEEEEECSSCEEEEEEE--TTEECC---CEEESCC
T ss_pred HHHHHHHHHHCCCe-EEecHHHHHHHHHHHHHhc-CC-----CCCeEEEEeCCCceEEEEee--CCeeee---EEEecce
Confidence 34455555679987 66654 4444444444322 11 12359999999999999975 443322 2234788
Q ss_pred cHHHHHH
Q psy7140 792 GRNIDKI 798 (1304)
Q Consensus 792 G~~~D~~ 798 (1304)
...+.+.
T Consensus 172 ~vrl~e~ 178 (508)
T 3hi0_A 172 GLRLSEQ 178 (508)
T ss_dssp HHHHHHH
T ss_pred EEehhhc
Confidence 8877653
No 162
>1iv0_A Hypothetical protein; rnaseh-like, YQGF, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Thermus thermophilus} SCOP: c.55.3.8
Probab=63.17 E-value=4.7 Score=36.26 Aligned_cols=21 Identities=33% Similarity=0.466 Sum_probs=18.1
Q ss_pred ceEEEEEccCccEEEEEEECC
Q psy7140 560 MSVIGIDFGTESCYLSVAKSG 580 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g 580 (1304)
|.++|||+|+..+.+|+..+.
T Consensus 1 mriLglD~G~kriGvAvsd~~ 21 (98)
T 1iv0_A 1 MRVGALDVGEARIGLAVGEEG 21 (98)
T ss_dssp CCEEEEEESSSEEEEEEECSC
T ss_pred CcEEEEEeCCCEEEEEEEeCC
Confidence 468999999999999998654
No 163
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=62.69 E-value=2.5e+02 Score=33.42 Aligned_cols=41 Identities=12% Similarity=0.327 Sum_probs=31.6
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc
Q psy7140 872 IFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF 917 (1304)
Q Consensus 872 ~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f 917 (1304)
+++-+.+.+.++++..+ ++.|+|+||.+....+++.|.+.+
T Consensus 232 ~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 232 AFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 34444555666666655 368999999999999999999876
No 164
>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*
Probab=61.00 E-value=2.7e+02 Score=33.18 Aligned_cols=185 Identities=14% Similarity=0.167 Sum_probs=90.1
Q ss_pred ccceEEEee-cCCCCHHHHHHH--HHHHHHcCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEE
Q psy7140 166 KVHDCVLAV-PSYFTNNERKAL--LTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCI 242 (1304)
Q Consensus 166 ~~~~~vitV-Pa~~~~~qr~~l--~~A~~~AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv 242 (1304)
.+..+++|. |.+|+.-..-.. +.-+...|.+.+.+ +--.|=+++...... . ..+ +++-+-||++.+-
T Consensus 72 ~id~ia~~~gPG~~~~l~vg~~~ak~la~~~~~p~~~v-~h~~aH~~~~~~~~~-~----~~p---~~l~vsGg~t~~~- 141 (540)
T 3en9_A 72 EIDLIAFSQGPGLGPSLRVTATVARTLSLTLKKPIIGV-NHCIAHIEIGKLTTE-A----EDP---LTLYVSGGNTQVI- 141 (540)
T ss_dssp GCCEEEEEEESSCHHHHHHHHHHHHHHHHHHTCCEEEE-EHHHHHHHHHHHHSS-C----SSC---EEEEECSSCEEEE-
T ss_pred HCcEEEEecCCCchhhHHHHHHHHHHHHHHhCCCeeEe-ccHHHHHHHHHHhcC-C----CCC---cEEEEcCCCcEEE-
Confidence 466676775 887775432111 11233447776554 333333332222221 1 123 4455667777654
Q ss_pred EEEECCeEEEEEEecCCCcccHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhhccccCCceeeEEEeeec
Q psy7140 243 AAFVKGKLKVLSNVCDSEIGGRNIDKILAEYISTDFVKRYKIDPRTNARAYIRLLSEIEKLKKQMSANSNKLPLNIECFM 322 (1304)
Q Consensus 243 ~~~~~~~~~v~~~~~~~~lGG~~~D~~l~~~l~~~~~~~~~~~~~~~~~~~~~L~~~~e~~K~~Ls~~~~~~~~~i~~~~ 322 (1304)
.+..+.+++++...|..+ |+-||..= +..++.... .. .|...|...+..+. ++...
T Consensus 142 -~~~~~~~~~lg~t~d~s~-G~~~D~~a---------~~lgl~~~g-g~---~ie~lA~~g~~~~~---------~p~~~ 197 (540)
T 3en9_A 142 -AYVSKKYRVFGETLDIAV-GNCLDQFA---------RYVNLPHPG-GP---YIEELARKGKKLVD---------LPYTV 197 (540)
T ss_dssp -EEETTEEEEEEEBSSSCH-HHHHHHHH---------HHTTCCSSC-HH---HHHHHHHTCCCCCC---------CCCCE
T ss_pred -EEeCCceEEEeeccchHh-HHHHHHHH---------HHcCCCCCC-HH---HHHHHHHcCCccCc---------CCCCC
Confidence 455788999988765444 56666421 223443222 11 22222322221110 11111
Q ss_pred CCcceEEE-------------EcHHHHHHHHHH-HHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc
Q psy7140 323 DDKDVHAE-------------LKRNDLETLCEH-IFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF 388 (1304)
Q Consensus 323 ~~~~~~~~-------------itr~~fe~~~~~-~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f 388 (1304)
.+.++++. .+..++...++. +++-+...+.++++..+ ++.|+|+||.+....+++.|.+..
T Consensus 198 ~~~~~sfsgl~~~~~~~~~~~~~~~~ia~~fq~~~~~~l~~~~~~a~~~~~-----~~~~~~~GGVa~N~~l~~~l~~~~ 272 (540)
T 3en9_A 198 KGMDIAFSGLLTAAMRAYDAGERLEDICYSLQEYAFSMLTEITERALAHTN-----KGEVMLVGGVAANNRLREMLKAMC 272 (540)
T ss_dssp ETTEECCHHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHHHH
T ss_pred CCcceecHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhC-----CCeEEEeCcHHhHHHHHHHHHHHH
Confidence 12222110 012222221111 23334455556665554 468999999999999999999876
Q ss_pred C
Q psy7140 389 H 389 (1304)
Q Consensus 389 ~ 389 (1304)
.
T Consensus 273 ~ 273 (540)
T 3en9_A 273 E 273 (540)
T ss_dssp H
T ss_pred H
Confidence 3
No 165
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=59.16 E-value=10 Score=42.88 Aligned_cols=19 Identities=21% Similarity=0.448 Sum_probs=16.9
Q ss_pred CcEEEEEEeCCceeEEEEE
Q psy7140 754 PRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 754 ~~~vlv~D~Gggt~dvsvv 772 (1304)
++.++|+|+|||+|.+++.
T Consensus 139 ~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 139 NKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp SSCEEEEEECSSEEEEEEE
T ss_pred cccEEEEEeCCCceEEEEe
Confidence 3569999999999999987
No 166
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=58.85 E-value=4.8 Score=39.40 Aligned_cols=20 Identities=20% Similarity=0.624 Sum_probs=17.5
Q ss_pred CcEEEEEcCcccEEEEEEeC
Q psy7140 1 MSVIGIDFGTESCYLSVAKS 20 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~~ 20 (1304)
|.++|||+|+..+.+|+.+.
T Consensus 3 mriLGiDpG~~riGvAv~d~ 22 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDE 22 (150)
T ss_dssp EEEEEEEECSSEEEEEEECT
T ss_pred CEEEEEEccCCEEEEEEEEC
Confidence 67999999999999998654
No 167
>1vhx_A Putative holliday junction resolvase; structural genomics, hydrolase; 1.96A {Bacillus subtilis} SCOP: c.55.3.8
Probab=58.23 E-value=5.9 Score=38.74 Aligned_cols=21 Identities=19% Similarity=0.539 Sum_probs=18.5
Q ss_pred ceEEEEEccCccEEEEEEECC
Q psy7140 560 MSVIGIDFGTESCYLSVAKSG 580 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g 580 (1304)
|.++|||+|+..|.+|+....
T Consensus 3 mriLGiDpG~~riGvAv~d~~ 23 (150)
T 1vhx_A 3 LRILGLDLGTKTLGVALSDEM 23 (150)
T ss_dssp EEEEEEEECSSEEEEEEECTT
T ss_pred CEEEEEEccCCEEEEEEEECC
Confidence 679999999999999998754
No 168
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=56.28 E-value=24 Score=44.22 Aligned_cols=64 Identities=16% Similarity=0.139 Sum_probs=46.4
Q ss_pred HHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc---CCCCCCCC---CchhHHHhHHHHHhhHhc
Q psy7140 875 RIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPSTTL---NQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 875 ~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f---g~~~~~~~---n~~eava~Gaa~~aa~ls 943 (1304)
-+.+.+.++.+..+ ++.|+|.||......+++.|.+.+ |.++..+. --|..+|.|.|++|+..-
T Consensus 692 ~L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~L 761 (772)
T 4g9i_A 692 AFAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLYL 761 (772)
T ss_dssp HHHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHHH
Confidence 34445555555544 468999999999999999999987 44444332 238899999999887643
No 169
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=55.41 E-value=46 Score=37.70 Aligned_cols=48 Identities=13% Similarity=0.135 Sum_probs=28.5
Q ss_pred cCCCeEEeechhHHHHHHhhhhcC------CC--CCCCCCCcEEEEEEecCCeEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQ------DL--PEDDQNPRYVAFVDFGYSALQVCI 242 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~------~~--~~~~~~~~~vlV~D~GggT~dvsv 242 (1304)
.|++ +.+.|+..|||++-..... .+ .......++++++-+|-| +-.++
T Consensus 108 ~g~P-V~veNDanaaAlgE~~~G~~p~~~~~l~~~g~~~~~~~~v~l~lGtG-IG~gi 163 (366)
T 3mcp_A 108 FGIP-VFINNDGSLFAYGEALTGVLPEINRRLREAGSTKRYKNLLGVTLGTG-FGAGV 163 (366)
T ss_dssp HCSC-EEEECHHHHHHHHHHHTSHHHHHHHHHHHTTCCCCCCEEEEEEESSS-EEEEE
T ss_pred HCCC-EEEechhhHHHHHHHHhCCCcccccccccccccCCCCcEEEEEECCc-ceEEE
Confidence 3887 5899999999998644320 00 000123457788888866 33444
No 170
>3aap_A Ectonucleoside triphosphate diphosphohydrolase I; adenosine triphosphatase, ntpdase; 1.60A {Legionella pneumophila} PDB: 3aaq_A* 3aar_A*
Probab=54.18 E-value=17 Score=41.05 Aligned_cols=49 Identities=12% Similarity=0.176 Sum_probs=29.0
Q ss_pred CCCeEEeechhHHHHHHhhhhcCCCCCCC-CCCcEEEEEEecCCeEEEEEE
Q psy7140 194 GLNVLRLINETTATALAYGIYKQDLPEDD-QNPRYVAFVDFGYSALQVCIA 243 (1304)
Q Consensus 194 Gl~~~~li~Ep~AAal~y~~~~~~~~~~~-~~~~~vlV~D~GggT~dvsv~ 243 (1304)
|+. +++|+-.+=|.+.|.--...+.... ...+.++|+|+|||++.+++.
T Consensus 108 g~~-v~VIsG~eEa~~~~~gv~~~l~~~~~~~~~t~~v~DiGGGStei~~~ 157 (353)
T 3aap_A 108 LVE-AKTITGNDEALFDWLAVNYKLDTLKSVQNKSVGVMDMGGASVQIVFP 157 (353)
T ss_dssp EEE-EEECCHHHHHHHHHHHHHHHTTCSSSCCSSCEEEEEECSSEEEEEEE
T ss_pred CCe-EEECChHHHHHHHHHHHHHHhhhccccccccEEEEEeCCCceEEEEe
Confidence 544 4777766666666532111111000 123458999999999999986
No 171
>1woq_A Inorganic polyphosphate/ATP-glucomannokinase; transferase; HET: BGC; 1.80A {Arthrobacter SP} SCOP: c.55.1.10 c.55.1.10
Probab=54.11 E-value=1.2e+02 Score=32.20 Aligned_cols=45 Identities=20% Similarity=0.271 Sum_probs=28.2
Q ss_pred cCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEE
Q psy7140 722 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 722 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 772 (1304)
.|++ +.+.|+..|+|++....... ......++++-+|.| .-..++
T Consensus 114 ~~~p-V~v~NDanaaalaE~~~g~~----~~~~~~~~~l~~GtG-IG~giv 158 (267)
T 1woq_A 114 LGRP-VEVINDADAAGLAEARYGAG----AGVKGTVLVITLGTG-IGSAFI 158 (267)
T ss_dssp HTSC-EEEEEHHHHHHHHHHHHSTT----TTCCSEEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEeehhHHHHHHHHHhCCC----CCCCCcEEEEEECcc-eEEEEE
Confidence 3666 68999999999985433211 111235777788876 555553
No 172
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=53.03 E-value=1.3e+02 Score=27.10 Aligned_cols=88 Identities=14% Similarity=0.162 Sum_probs=51.5
Q ss_pred hHHHHHHHHHHHHHHHhh--------cCCCCCHHHHHHHHHHHHhccchHHHHHHhhccChhHHHHHHHHHHHHHHHHHH
Q psy7140 1133 NRNVLNKKLDETENWLYE--------EGQDVNRSVYNDRLNSLRTVGDPVKMRAMEYAMRPNILEEYKHSVQSAKNIVDA 1204 (1304)
Q Consensus 1133 er~~i~~~l~e~~~WL~~--------~g~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~rp~~~~~l~~~l~~~~~~~~~ 1204 (1304)
+...+...++++..||.+ .....+.+.++.++++.+.+...|..+- ..+......+..++..
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~----------~~v~~~~~~g~~L~~~ 72 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQAQGEISNDVEVVKDQFHTHEGYMMDLTAHQ----------GRVGNILQLGSKLIGT 72 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHCSCCSSHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHHHHHhH----------HHHHHHHHHHHHHHHc
Confidence 346778888888888853 1112356667777777776666664432 1233333444444432
Q ss_pred HhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy7140 1205 AFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKV 1238 (1304)
Q Consensus 1205 ~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~ 1238 (1304)
.|.+.++...|...+++...-++...
T Consensus 73 --------~~~~~~~~~~i~~~l~~l~~rw~~L~ 98 (119)
T 3uun_A 73 --------GKLSEDEETEVQEQMNLLNSRWECLR 98 (119)
T ss_dssp --------TCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 24567777777777777766555443
No 173
>3mcp_A Glucokinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, transferase; 3.00A {Parabacteroides distasonis}
Probab=52.38 E-value=48 Score=37.54 Aligned_cols=18 Identities=22% Similarity=0.327 Sum_probs=16.8
Q ss_pred eEEEEEccCccEEEEEEE
Q psy7140 561 SVIGIDFGTESCYLSVAK 578 (1304)
Q Consensus 561 ~vvGID~Gtt~s~va~~~ 578 (1304)
.++|||+|.|++.++++.
T Consensus 10 ~~lgiDIGgt~i~~~l~d 27 (366)
T 3mcp_A 10 IVMTLDAGGTNFVFSAIQ 27 (366)
T ss_dssp EEEEEECSSSEEEEEEEE
T ss_pred EEEEEEECcceEEEEEEE
Confidence 589999999999999987
No 174
>2hoe_A N-acetylglucosamine kinase; TM1224, structural genomics, PSI-2, protein structure initiative, joint center structural genomics, JCSG; 2.46A {Thermotoga maritima} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=51.80 E-value=96 Score=35.19 Aligned_cols=47 Identities=21% Similarity=0.185 Sum_probs=29.5
Q ss_pred eeEEEEecCCCCC-hhHHHHHHHHcCC--------CCCCCCCchhHHHhHHHHHhh
Q psy7140 894 IHSIEIVGGSSRI-PAFKNVIESVFHK--------PPSTTLNQDEAVSRGCALQCA 940 (1304)
Q Consensus 894 I~~V~LvGG~sri-p~v~~~l~~~fg~--------~~~~~~n~~eava~Gaa~~aa 940 (1304)
.+.|+|.||.+.. |.+.+.+++.+.. ++....-.+.+.++|||..+.
T Consensus 315 P~~IvlgG~~~~~~~~l~~~l~~~l~~~~~~~~~~~i~~s~~~~~a~~~GAa~l~~ 370 (380)
T 2hoe_A 315 ISKIVIGGFFKELGENFLKKIKIEVETHLLYKHSVDMSFSKVQEPVIAFGAAVHAL 370 (380)
T ss_dssp CCEEEEEEGGGGGHHHHHHHHHHHHHHHCSSSCCCEEEECCCCSCHHHHHHHHHHH
T ss_pred CCEEEEcCchhhhhHHHHHHHHHHHHHhcCCCCCcEEEEcCCCCcHHHHHHHHHHH
Confidence 3678999988764 6666666655421 112222445689999998764
No 175
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=51.24 E-value=40 Score=41.16 Aligned_cols=65 Identities=11% Similarity=0.084 Sum_probs=48.3
Q ss_pred HHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc-CCCCC---CCCCchhHHHhHHHHHhhH
Q psy7140 872 IFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF-HKPPS---TTLNQDEAVSRGCALQCAI 941 (1304)
Q Consensus 872 ~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f-g~~~~---~~~n~~eava~Gaa~~aa~ 941 (1304)
+.+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++. ...--|-++++|.|+.|+.
T Consensus 583 la~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 583 LAQGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 44555555666665554 478999999999999999999988 54432 2345588999999998864
No 176
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=49.71 E-value=66 Score=37.27 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=28.1
Q ss_pred cCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 243 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 243 (1304)
.|++ +.+.|+..|||++....... .....++++-+|.| .-.+++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~-----~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS-----QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC-----CCCCcEEEEEECCc-EEEEEE
Confidence 3776 58999999999986443221 12345677788877 334443
No 177
>3s84_A Apolipoprotein A-IV; four helix bundle, transport protein; 2.40A {Homo sapiens}
Probab=49.11 E-value=1.5e+02 Score=31.85 Aligned_cols=19 Identities=5% Similarity=0.032 Sum_probs=9.5
Q ss_pred HHHHHHHHHHHHHHHHHhh
Q psy7140 1254 CDQIREEKYKFEKSVWSVL 1272 (1304)
Q Consensus 1254 ~~di~~k~~~l~~~~~~l~ 1272 (1304)
+.|++..+..+...+..-+
T Consensus 229 ~e~~~~~l~~~~e~l~~~l 247 (273)
T 3s84_A 229 GENFNKALVQQMEQLRQKL 247 (273)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHh
Confidence 4566655554444444333
No 178
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=48.96 E-value=27 Score=39.28 Aligned_cols=70 Identities=7% Similarity=0.080 Sum_probs=43.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcC-CCCC------CCCCchhHHHhHHHHHh
Q psy7140 867 TLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFH-KPPS------TTLNQDEAVSRGCALQC 939 (1304)
Q Consensus 867 ~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg-~~~~------~~~n~~eava~Gaa~~a 939 (1304)
++...+.+=+...|.+.++.... .++.|+++||+++.|.+.+.|++.++ ..+. .+.+.-||+ .-|++|
T Consensus 260 Dv~ATLt~~TA~sIa~~~~~~~~---~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~--aFA~LA 334 (371)
T 3qbx_A 260 DIQATLLELSARSISESLLDAQP---DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGM--AFAWLA 334 (371)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHCT---TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHH--HHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhccC---CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHH--HHHHHH
Confidence 34444444444555555544331 35789999999999999999999985 3322 223444554 455665
Q ss_pred hH
Q psy7140 940 AI 941 (1304)
Q Consensus 940 a~ 941 (1304)
..
T Consensus 335 ~~ 336 (371)
T 3qbx_A 335 HR 336 (371)
T ss_dssp HH
T ss_pred HH
Confidence 53
No 179
>1z05_A Transcriptional regulator, ROK family; structural genomics, protein structure initiative, midwest center for structural genomics; 2.00A {Vibrio cholerae o1 biovar eltor} SCOP: a.4.5.63 c.55.1.10 c.55.1.10
Probab=48.67 E-value=83 Score=36.42 Aligned_cols=44 Identities=25% Similarity=0.306 Sum_probs=28.4
Q ss_pred cCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEE
Q psy7140 722 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 722 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 772 (1304)
.|++ +.+.|+..|||++-...... ....+++++-+|.| .-..++
T Consensus 208 ~~~p-V~v~NDa~aaalaE~~~g~~-----~~~~~~v~l~~GtG-iG~giv 251 (429)
T 1z05_A 208 TGLP-VFVANDTRAWALAEKLFGHS-----QDVDNSVLISIHHG-LGAGIV 251 (429)
T ss_dssp HCSC-EEEEEHHHHHHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred hCCC-EEEechhHHHHHHHHHhCCC-----CCCCcEEEEEECCc-EEEEEE
Confidence 3776 58999999999875433211 22356778888877 444444
No 180
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=48.47 E-value=31 Score=38.84 Aligned_cols=70 Identities=9% Similarity=0.050 Sum_probs=45.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCC-CC------CCCCCchhHHHhHHHHH
Q psy7140 866 ETLCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHK-PP------STTLNQDEAVSRGCALQ 938 (1304)
Q Consensus 866 e~l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~-~~------~~~~n~~eava~Gaa~~ 938 (1304)
+++...+.+=+...|.+.++... ..+.|+++||+++.|.+.+.|++.++. ++ ..+.+.-||+|. |+.
T Consensus 266 ~Dv~ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aF--A~L 339 (370)
T 3cqy_A 266 EDIQSTLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAF--AWL 339 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHH--HHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHH--HHH
Confidence 34555555555566666665442 346899999999999999999999942 33 223455566655 555
Q ss_pred hhH
Q psy7140 939 CAI 941 (1304)
Q Consensus 939 aa~ 941 (1304)
|..
T Consensus 340 A~~ 342 (370)
T 3cqy_A 340 AMR 342 (370)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 181
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=48.11 E-value=16 Score=35.93 Aligned_cols=19 Identities=26% Similarity=0.415 Sum_probs=17.4
Q ss_pred CcEEEEEcCcccEEEEEEe
Q psy7140 1 MSVIGIDFGTESCYLSVAK 19 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~ 19 (1304)
|.|+|||-|++++..++..
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 8899999999999999874
No 182
>2yhw_A Bifunctional UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; transferase, sialic acid, mannac, ROK family; HET: BM3 2PE; 1.64A {Homo sapiens} PDB: 2yhy_A* 2yi1_A* 3eo3_A
Probab=47.33 E-value=2.5e+02 Score=31.01 Aligned_cols=125 Identities=14% Similarity=0.187 Sum_probs=0.0
Q ss_pred ceEEEEEccCccEEEEEEECCceEEEeCCCCCcccceEEEEeCCceEEcHhHHhhhhcCCCcchhhhhHhcCCCCCChhH
Q psy7140 560 MSVIGIDFGTESCYLSVAKSGGIETIVNDYSLRSTPSCVAFSDKNRILGVAAKNQTVTNVKNTIFGFKRLLGRTYDDPFV 639 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~g~~~ii~n~~~~r~~Ps~V~~~~~~~~~G~~A~~~~~~~~~~~~~~~k~~lG~~~~~~~~ 639 (1304)
+.++|||+|+|++++++++..
T Consensus 30 ~~~lgiDiGgt~i~~~l~d~~----------------------------------------------------------- 50 (343)
T 2yhw_A 30 LSALAVDLGGTNLRVAIVSMK----------------------------------------------------------- 50 (343)
T ss_dssp EEEEEEEECSSEEEEEEEETT-----------------------------------------------------------
T ss_pred cEEEEEEECCCEEEEEEECCC-----------------------------------------------------------
Q ss_pred HHhhccCCceeeecCCCceEEEEEecCCceeeCHHHHHHHHHHHHHHHHHhhh--ccccceEEEeecC------------
Q psy7140 640 QEELKSMPFQSLKQNDGSIGIKVNYLNKEHVFSPEQLTAMLFTKLKDISENEI--QNKVHDCVLAVPS------------ 705 (1304)
Q Consensus 640 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~eel~a~~L~~l~~~a~~~~--~~~~~~~VitVP~------------ 705 (1304)
|.+.......... +++++...+.+.+.+...... ..++..+.|++|.
T Consensus 51 ----------------G~il~~~~~~~~~---~~~~~~~~i~~~i~~~~~~~~~~~~~i~gigi~~pG~vd~~~g~v~~~ 111 (343)
T 2yhw_A 51 ----------------GEIVKKYTQFNPK---TYEERINLILQMCVEAAAEAVKLNCRILGVGISTGGRVNPREGIVLHS 111 (343)
T ss_dssp ----------------SCEEEEEEEECCS---SHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEESSEEETTTTEEEEC
T ss_pred ----------------CcEEEEEEEcCCC---CHHHHHHHHHHHHHHHHHhcccccCceEEEEEecccCEeCCCCEEEeC
Q ss_pred -----CCC-HHHHHHHHHHHHHcCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEE
Q psy7140 706 -----YFT-NNERKALLTAASIAGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 706 -----~f~-~~qr~~l~~Aa~~AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 772 (1304)
.|. ..-++.+.+.. |++ +.+.|+..|||++-...... ...++++++-+|.| .-..++
T Consensus 112 ~~~~~~w~~~~l~~~l~~~~---~~p-v~v~NDa~aaal~E~~~g~~-----~~~~~~v~i~~GtG-iG~gii 174 (343)
T 2yhw_A 112 TKLIQEWNSVDLRTPLSDTL---HLP-VWVDNDGNCAALAERKFGQG-----KGLENFVTLITGTG-IGGGII 174 (343)
T ss_dssp CTTSSSCSSEECHHHHHHHH---CSC-EEEEEHHHHHHHHHHHTSTT-----TTCSCEEEEEESSS-EEEEEE
T ss_pred CcCCCCCcCCCHHHHHHHHH---CCC-EEEechhHHHHHHHHHhCCC-----CCCCcEEEEEECCC-EEEEEE
No 183
>3ttc_A HYPF, transcriptional regulatory protein; Zn finger, nucleotide binding, hydrogenase maturation factor transferase; HET: ADP; 1.86A {Escherichia coli} PDB: 3tsp_A* 3tsu_A* 3ttf_A* 3ttd_A 3tsq_A
Probab=46.79 E-value=46 Score=40.64 Aligned_cols=63 Identities=11% Similarity=0.084 Sum_probs=45.3
Q ss_pred HHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc-CCCCC---CCCCchhHHHHHHHHHhhH
Q psy7140 345 GRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF-HKPPS---TTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 345 ~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f-~~~~~---~~~np~eaVa~Gaa~~aa~ 412 (1304)
+.+.+.+.++.++.+ ++.|+|+||.+....+++.|.+.+ |.++. ...--|-++|+|.|+.|+.
T Consensus 585 ~~L~~~~~ra~~~~g-----~~~VvLsGGV~~N~~Lre~L~~~l~g~~v~~p~~~p~~DnGiaLGQA~~a~~ 651 (657)
T 3ttc_A 585 QGFAALMREQATMRG-----ITTLVFSGGVIHNRLLRARLAHYLADFTLLFPQSLPAGDGGLSLGQGVIAAA 651 (657)
T ss_dssp HHHHHHHHHHHHTTT-----CCEEEEESGGGGCHHHHHHHHHHTTTSEEECCCSSCSSGGGHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcC-----CCEEEEECcHHHHHHHHHHHHHHhCCCEEEecCCCCCCcHHHHHHHHHHHHH
Confidence 334444455555443 468999999999999999999987 43332 2334588999999998864
No 184
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=45.79 E-value=83 Score=36.05 Aligned_cols=44 Identities=14% Similarity=0.222 Sum_probs=28.1
Q ss_pred cCCCeEEeechhHHHHHHhhhhcCCCCCCCCCCcEEEEEEecCCeEEEEEE
Q psy7140 193 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 243 (1304)
Q Consensus 193 AGl~~~~li~Ep~AAal~y~~~~~~~~~~~~~~~~vlV~D~GggT~dvsv~ 243 (1304)
.|++ +.+.|+..|||++....... .....++++-+|.| .-.+++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~-----~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS-----RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC-----CCCCcEEEEEECCc-EEEEEE
Confidence 3776 58999999999986433211 12244677788887 344443
No 185
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=45.51 E-value=31 Score=40.36 Aligned_cols=49 Identities=10% Similarity=0.109 Sum_probs=29.7
Q ss_pred CeEEeechhHHHHHHhhhhcCCCCCC----------CCCCcEEEEEEecCCeEEEEEEE
Q psy7140 196 NVLRLINETTATALAYGIYKQDLPED----------DQNPRYVAFVDFGYSALQVCIAA 244 (1304)
Q Consensus 196 ~~~~li~Ep~AAal~y~~~~~~~~~~----------~~~~~~vlV~D~GggT~dvsv~~ 244 (1304)
..+++|+-.+=|.++|.--...+... ......++|+|+|||++.++...
T Consensus 150 ~~v~VIsG~eEa~y~wl~vn~~lg~~~~~~~~~~~~~~~~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 150 RGARILSGQDEGVFGWVTANYLLENFIKYGWVGRWIRPRKGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTSCCEETTEECSSCCCCCEEEEECSSEEEEEEEC
T ss_pred CceEEcCchHHhhhhHHHHHhhhcccccccccccccccCCCceEEEEcCCCceEEEecc
Confidence 46788887777776662111111000 00123478899999999999864
No 186
>4g9i_A Hydrogenase maturation protein HYPF; zinc finger, ATP binding, carbamoyla transferase; 4.50A {Thermococcus kodakarensis}
Probab=45.01 E-value=43 Score=41.93 Aligned_cols=62 Identities=16% Similarity=0.168 Sum_probs=44.7
Q ss_pred HHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcC---CCCCCCC---CchhHHHHHHHHHhhHh
Q psy7140 347 IEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFH---KPPSTTL---NQDEAVSRGCALQCAIL 413 (1304)
Q Consensus 347 i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~---~~~~~~~---np~eaVa~Gaa~~aa~l 413 (1304)
+...+.++.++.+ ++.|+|.||....-.+++.|.+.+. .++..+. --|..+|+|.|++|+..
T Consensus 693 L~~~~~~a~~~tg-----~~~VvLSGGVa~N~~L~~~l~~~L~~~G~~v~~p~~vP~nDgGiALGQA~iA~~~ 760 (772)
T 4g9i_A 693 FAHTAVERAREFG-----VKNVALSGGVAYNELITKMIRKVVEANGLNFHVTTEVPRGDNGVNVGQAFLGGLY 760 (772)
T ss_dssp HHHHHHHHHHTTT-----CSCCCEESSTTCCHHHHHHHHHHGGGSSCCCCCCTTSCSSGGGHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhC-----cCEEEEEchHHHHHHHHHHHHHHHHHCCCEEEccCCCCCCcchHHHHHHHHHHHH
Confidence 3445555555544 5679999999999999999998874 3343322 23889999999988653
No 187
>1z6r_A MLC protein; transcriptional repressor, ROK family protein, DNA binding P helix-turn-helix, phosphotransferase system; 2.70A {Escherichia coli} SCOP: a.4.5.63 c.55.1.10 c.55.1.10 PDB: 3bp8_A
Probab=44.63 E-value=97 Score=35.46 Aligned_cols=44 Identities=14% Similarity=0.222 Sum_probs=28.3
Q ss_pred cCCceeeeechhHHHHHHhccccCCCCCCCCCCcEEEEEEeCCceeEEEEE
Q psy7140 722 AGLNVLRLINETTATALAYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIA 772 (1304)
Q Consensus 722 AGl~~~~li~Ep~Aaal~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv 772 (1304)
.|++ +.+.|+..|+|++-...... ....+++++-+|.| .-..++
T Consensus 186 ~~~p-v~v~NDa~aaalaE~~~g~~-----~~~~~~v~l~~GtG-iG~giv 229 (406)
T 1z6r_A 186 TGVP-VYIQHDISAWTMAEALFGAS-----RGARDVIQVVIDHN-VGAGVI 229 (406)
T ss_dssp HSSC-EEEEEHHHHHHHHHHHHSTT-----TTCSSEEEEEESSS-EEEEEE
T ss_pred HCCC-EEEechhHHHHHHHHHhcCC-----CCCCcEEEEEECCc-EEEEEE
Confidence 3676 58999999999875433211 12356788888877 445544
No 188
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=44.07 E-value=1.8e+02 Score=26.13 Aligned_cols=88 Identities=10% Similarity=0.125 Sum_probs=52.6
Q ss_pred hHHHHHHHHHHHHHHHhhc-----C---CCCCHHHHHHHHHHHHhccchHHHHHHhhccChhHHHHHHHHHHHHHHHHHH
Q psy7140 1133 NRNVLNKKLDETENWLYEE-----G---QDVNRSVYNDRLNSLRTVGDPVKMRAMEYAMRPNILEEYKHSVQSAKNIVDA 1204 (1304)
Q Consensus 1133 er~~i~~~l~e~~~WL~~~-----g---~~a~~~~~~~kl~~L~~~~~~i~~R~~e~~~rp~~~~~l~~~l~~~~~~~~~ 1204 (1304)
+...+...++++..||.+- . ...+.+.++.++++.+.+...|..+- ..+......+..++..
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~~~~~~~d~~~v~~~l~~h~~l~~ei~~~~----------~~v~~v~~~g~~L~~~ 72 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQEQDDISDDVEDVKEQFATHETFMMELSAHQ----------SSVGSVLQAGNQLMTQ 72 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHTSCCCCSSHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHHHHHHHH----------HHHHHHHHHHHHHHHh
Confidence 3467778888888888531 1 12456677777777777766664431 1233333344444421
Q ss_pred HhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy7140 1205 AFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKV 1238 (1304)
Q Consensus 1205 ~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~ 1238 (1304)
.|.+.++...|...+++...-|+...
T Consensus 73 --------~~~~~~~~~~i~~~l~~l~~rw~~L~ 98 (118)
T 3uul_A 73 --------GTLSDEEEFEIQEQMTLLNARWEALR 98 (118)
T ss_dssp --------TCSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred --------CCCChhHHHHHHHHHHHHHHHHHHHH
Confidence 25677777777777777766555443
No 189
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=43.62 E-value=54 Score=40.87 Aligned_cols=65 Identities=15% Similarity=0.036 Sum_probs=46.1
Q ss_pred HHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHc---CCCCCC---CCCchhHHHhHHHHHhhHhc
Q psy7140 874 GRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPST---TLNQDEAVSRGCALQCAILS 943 (1304)
Q Consensus 874 ~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~f---g~~~~~---~~n~~eava~Gaa~~aa~ls 943 (1304)
+.+.+.+.++.+..+ ++.|+|+||.+....+++.|.+.+ |.++.. ..--|-++|+|.|+.|+...
T Consensus 679 ~~L~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 679 NFTYDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 334444445554444 478999999999999999999887 444322 23358899999999887543
No 190
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=42.24 E-value=9.7 Score=37.79 Aligned_cols=19 Identities=42% Similarity=0.441 Sum_probs=17.4
Q ss_pred CcEEEEEcCcccEEEEEEe
Q psy7140 1 MSVIGIDFGTESCYLSVAK 19 (1304)
Q Consensus 1 m~viGID~GTt~s~va~~~ 19 (1304)
|-|+|||-|++++..++..
T Consensus 1 MrILGIDPGl~~tG~gvi~ 19 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVA 19 (166)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEE
Confidence 8899999999999999864
No 191
>3cj1_A Ectonucleoside triphosphate diphosphohydrolase 2; alpha/beta protein, actin-like fold, alternative splicing, calcium, glycoprotein, magnesium; 1.70A {Rattus norvegicus} PDB: 3cj7_A* 3cj9_A* 3cja_A*
Probab=41.61 E-value=30 Score=40.42 Aligned_cols=20 Identities=15% Similarity=0.255 Sum_probs=16.9
Q ss_pred CcEEEEEEeCCceeEEEEEE
Q psy7140 754 PRYVAFVDFGYSALQVCIAA 773 (1304)
Q Consensus 754 ~~~vlv~D~Gggt~dvsvv~ 773 (1304)
...++++|+|||+|.++...
T Consensus 189 ~~t~gvlDlGGgStqi~~~~ 208 (456)
T 3cj1_A 189 KGTLGAMDLGGASTQITFET 208 (456)
T ss_dssp CCCCEEEEECSSEEEEEEEC
T ss_pred CCceEEEEcCCCceEEEecc
Confidence 34588999999999999863
No 192
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=41.60 E-value=23 Score=33.96 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=17.7
Q ss_pred cEEEEEcCcccEEEEEEeCC
Q psy7140 2 SVIGIDFGTESCYLSVAKSG 21 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g 21 (1304)
.++|||+|+..+.||+.+..
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 38999999999999998764
No 193
>1quu_A Human skeletal muscle alpha-actinin 2; triple-helix coiled coil, contractIle protein; 2.50A {Homo sapiens} SCOP: a.7.1.1 a.7.1.1
Probab=40.95 E-value=3.3e+02 Score=28.35 Aligned_cols=43 Identities=9% Similarity=0.195 Sum_probs=27.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHHHHH
Q psy7140 1222 TVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKYKFE 1265 (1304)
Q Consensus 1222 ~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~ 1265 (1304)
.+...++++..|+.++...-.......|+- .+..+..+.+.+.
T Consensus 133 qF~~~a~~~~~Wl~~~e~~l~~~~~~~d~e-~v~~ll~~h~~~~ 175 (250)
T 1quu_A 133 EFAKRAAPFNNWMEGAMEDLQDMFIVHSIE-EIQSLITAHEQFK 175 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTCCCCCCSTT-THHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHHHHHHHhccccccCCHH-HHHHHHHHHHHHH
Confidence 456778899999999887655544333332 5656666655554
No 194
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=40.49 E-value=19 Score=34.47 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=18.0
Q ss_pred eEEEEEccCccEEEEEEECC
Q psy7140 561 SVIGIDFGTESCYLSVAKSG 580 (1304)
Q Consensus 561 ~vvGID~Gtt~s~va~~~~g 580 (1304)
.++|||+|+..+.||+..+.
T Consensus 4 ~iLglD~G~kriGvAvsd~~ 23 (138)
T 1nu0_A 4 TLMAFDFGTKSIGVAVGQRI 23 (138)
T ss_dssp EEEEEECCSSEEEEEEEETT
T ss_pred eEEEEEeCCCEEEEEEEcCC
Confidence 58999999999999998765
No 195
>3qbx_A Anhydro-N-acetylmuramic acid kinase; acetate and sugar kinases, HSP70, actin superfamily, anhydro-N-actetylmuramic acid binding; HET: AH0; 2.10A {Pseudomonas aeruginosa} PDB: 3qbw_A*
Probab=40.43 E-value=57 Score=36.69 Aligned_cols=49 Identities=8% Similarity=0.018 Sum_probs=35.7
Q ss_pred cccEEEEEcCCCCchhHHHHHHHhcC-CCCC----CCCCchhHHHHHHHHHhhH
Q psy7140 364 AIHSIEIVGGSSRIPAFKNVIESVFH-KPPS----TTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 364 ~i~~ViLvGG~sr~p~v~~~l~~~f~-~~~~----~~~np~eaVa~Gaa~~aa~ 412 (1304)
.++.|+++||+++.|.+.+.|++.++ ..+. ..++++-.=|..-|++|..
T Consensus 283 ~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~~d~~Gi~~d~~EA~aFA~LA~~ 336 (371)
T 3qbx_A 283 DCEEVLVCGGGAFNTALMKRLAMLMPEARVASTDEYGIPPAWMEGMAFAWLAHR 336 (371)
T ss_dssp TCCEEEEESGGGGCHHHHHHHHHHCTTSEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred CCceEEEECCccCcHHHHHHHHHhCCCCEEeCHHHcCCChhHHHHHHHHHHHHH
Confidence 35789999999999999999999996 3222 2345665555566777754
No 196
>3vth_A Hydrogenase maturation factor; carbamoyltransfer, maturation of [NIFE]-hydrogenase, carbamoylphosphate, iron, HYPE; HET: APC AP2; 2.00A {Thermoanaerobacter tengcongensis} PDB: 3vti_A
Probab=39.82 E-value=39 Score=42.11 Aligned_cols=62 Identities=16% Similarity=0.056 Sum_probs=43.7
Q ss_pred HHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhc---CCCCCC---CCCchhHHHHHHHHHhhHhc
Q psy7140 348 EICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVF---HKPPST---TLNQDEAVSRGCALQCAILS 414 (1304)
Q Consensus 348 ~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f---~~~~~~---~~np~eaVa~Gaa~~aa~ls 414 (1304)
.+.+.++.++.+ ++.|+|+||.+....+++.|.+.+ |.++.. ..--|-++|+|.|++|+...
T Consensus 682 ~~~~~~a~~~~g-----~~~VvLsGGVa~N~~Lr~~L~~~l~~~g~~v~~p~~~p~~DgGialGQA~~a~~~~ 749 (761)
T 3vth_A 682 YDLANLIRKETG-----INKVVLSGGSFQNRYLLRRLIEKLSLSGFEVYSNSKVPCNDGGISLGQAVIANKIL 749 (761)
T ss_dssp HHHHHHHHHHHC-----CCEEEEESGGGGSHHHHHHHHHHHHHTTCEEEECSSSCSSGGGHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhC-----CCEEEEECcHHHHHHHHHHHHHHHHhCCCEEEecCCCCCCchHHHHHHHHHHHHHh
Confidence 334444444443 468999999999999999999887 333322 22348999999999987543
No 197
>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}
Probab=36.53 E-value=1.4e+02 Score=34.70 Aligned_cols=127 Identities=13% Similarity=0.133 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHhh---------cCCC-CCHHHHHHHHHHHHhccchHHHHHHhhccChhHHHHHHHHHHHHHHHHHHHhc
Q psy7140 1138 NKKLDETENWLYE---------EGQD-VNRSVYNDRLNSLRTVGDPVKMRAMEYAMRPNILEEYKHSVQSAKNIVDAAFK 1207 (1304)
Q Consensus 1138 ~~~l~e~~~WL~~---------~g~~-a~~~~~~~kl~~L~~~~~~i~~R~~e~~~rp~~~~~l~~~l~~~~~~~~~~~~ 1207 (1304)
...++++..||.+ -|.+ ++.+.+..|.+.|+.-......++.+.......-..+...-..+..+++.+.
T Consensus 8 ~r~v~dl~~Wl~E~~~~L~S~d~GkDL~sVe~LLqKH~~lE~eI~a~~~~v~~l~~~a~~~~~~~~L~~~y~~L~~~a~- 86 (450)
T 3r6n_A 8 KHVTSECLGWMRQQRAEMDMVAWGVDLASVEQHINSHRGIHNSIGDYRWQLDKIKADLREKSAIYQLEEEYENLLKASF- 86 (450)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH-
T ss_pred hccHHHHHHHHHHHHHhcCccccCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCcHHHHHHHHHHHHHHHHHH-
Q ss_pred CCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHHHHHHHHHH
Q psy7140 1208 GDDRFSHLSKQDLSTVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKYKFEKSVWS 1270 (1304)
Q Consensus 1208 ~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~~~ 1270 (1304)
....++ +.+-.+...+.+...|++++...-......+++. .+.-+..|.+.|+.++..
T Consensus 87 --~Rr~~L--e~L~qFl~d~~ee~~Wi~EKe~~~~s~d~gd~l~-dv~~l~~khq~l~~EL~~ 144 (450)
T 3r6n_A 87 --ERMDHL--RQLQNIIQATSREIMWINDCEEEELLYDWSDKNT-NIAQKQEAFSIRMSQLEV 144 (450)
T ss_dssp --HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHHSCCCSTTCC-CTTHHHHHHHHHHHHHHH
T ss_pred --HHHHHH--HHHHHHHHHHHHHHHHHHHHHHHHhccccCcChh-hHHHHHHHHHHHHHHHHH
No 198
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=36.49 E-value=31 Score=38.19 Aligned_cols=71 Identities=11% Similarity=-0.019 Sum_probs=38.2
Q ss_pred EcHHHHHHHHHHHH----HHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCC----CCCCCCchhHH
Q psy7140 331 LKRNDLETLCEHIF----GRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP----PSTTLNQDEAV 402 (1304)
Q Consensus 331 itr~~fe~~~~~~~----~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~----~~~~~np~eaV 402 (1304)
++.++.+++.+.+. ++|.+.+.+++.+.++ ..|+.+||+ +++-..+.+..+.. .....+.+-+-
T Consensus 243 ~~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vap 314 (334)
T 3cet_A 243 ISEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATP 314 (334)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHH
T ss_pred cChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccC
Confidence 35666666665544 4455566666655433 379999987 34444444332110 00011245567
Q ss_pred HHHHHHH
Q psy7140 403 SRGCALQ 409 (1304)
Q Consensus 403 a~Gaa~~ 409 (1304)
|.|+|+.
T Consensus 315 A~avA~l 321 (334)
T 3cet_A 315 SFAVAEL 321 (334)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 7888854
No 199
>3kbt_A Beta-I spectrin, spectrin beta chain, erythrocyte; complex, spectrin, spectrin repeat, three helix bundle, ANKY binding, disease mutation, structural protein, ZU5 sandwich; 2.75A {Homo sapiens} PDB: 3kbu_A
Probab=36.10 E-value=2.7e+02 Score=30.28 Aligned_cols=23 Identities=26% Similarity=0.192 Sum_probs=17.7
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhh
Q psy7140 1219 DLSTVETAIKQHVKWIEEKVSKL 1241 (1304)
Q Consensus 1219 e~~~l~~~~~~~~~Wl~~~~~~q 1241 (1304)
++..+...++++..|+.++....
T Consensus 218 ~~~~f~~~~~e~~~Wl~ek~~~L 240 (326)
T 3kbt_A 218 DLHRYFYTGAEILGLIDEKHREL 240 (326)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhhC
Confidence 35567778999999999987655
No 200
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=35.70 E-value=49 Score=38.49 Aligned_cols=47 Identities=11% Similarity=0.138 Sum_probs=28.2
Q ss_pred CeEEeechhHHHHHHhhhhc---CCCCCCCCCCcEEEEEEecCCeEEEEEEE
Q psy7140 196 NVLRLINETTATALAYGIYK---QDLPEDDQNPRYVAFVDFGYSALQVCIAA 244 (1304)
Q Consensus 196 ~~~~li~Ep~AAal~y~~~~---~~~~~~~~~~~~vlV~D~GggT~dvsv~~ 244 (1304)
..+++|+.-+=|.++|..-+ ..+... ....+.++|+|||++.++...
T Consensus 150 ~~v~iisG~eEg~y~wi~vnyllg~l~~~--~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 150 QGAKIITGQEEGAYGWITINYLLGRFKTP--GGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEEECCHHHHHHHHHHHHHHHTTTTC-----CCCCEEEEECSSEEEEEECC
T ss_pred CceEECCchhhhhhhHHHHHhhhccccCC--CCCceEEEecCCCceEEEecc
Confidence 35788887776666653211 111110 123467899999999998653
No 201
>3uul_A Utrophin; spectrin repeat, structural protein, cytoskeletal, helical bundle; 1.95A {Rattus norvegicus} PDB: 3uum_A
Probab=35.50 E-value=62 Score=29.41 Aligned_cols=25 Identities=16% Similarity=0.469 Sum_probs=18.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhcc
Q psy7140 1219 DLSTVETAIKQHVKWIEEKVSKLKS 1243 (1304)
Q Consensus 1219 e~~~l~~~~~~~~~Wl~~~~~~q~~ 1243 (1304)
++..+.+.+++...||.++......
T Consensus 3 ~L~~f~~~l~el~~WL~e~e~~l~~ 27 (118)
T 3uul_A 3 DLDSYQIALEEVLTWLLSAEDTFQE 27 (118)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHc
Confidence 5667778888888888877665544
No 202
>2nr5_A Hypothetical protein SO2669; PSI-2, MCSG, MAD, structural G protein structure initiative, midwest center for structural genomics; 1.90A {Shewanella oneidensis} SCOP: a.25.6.1
Probab=34.48 E-value=96 Score=23.44 Aligned_cols=23 Identities=22% Similarity=0.585 Sum_probs=17.2
Q ss_pred CHHhHHHHHHHHHHHHHHHhhcC
Q psy7140 1130 TDSNRNVLNKKLDETENWLYEEG 1152 (1304)
Q Consensus 1130 ~~~er~~i~~~l~e~~~WL~~~g 1152 (1304)
.-.|.+--.+.+.++++||..+.
T Consensus 42 dmqeveiwtnrikeledwlwges 64 (67)
T 2nr5_A 42 DMQEVEIWTNRIKELEDWLWGES 64 (67)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTS
T ss_pred hhHHHHHHHHHHHHHHHHhhcCC
Confidence 34456666789999999998653
No 203
>2l7b_A Apolipoprotein E, APO-E; lipid transport, atherosclerosis, alzheime disease; NMR {Homo sapiens}
Probab=34.43 E-value=1.3e+02 Score=32.97 Aligned_cols=138 Identities=15% Similarity=0.050 Sum_probs=80.9
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHhc---chhccc---cCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhcc
Q psy7140 1098 RQEKDRVDAKNALEEYVYELRDGLA---NDKADF---ITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVG 1171 (1304)
Q Consensus 1098 ~~~~~~~~akN~LEs~iy~~r~~L~---~~~~~~---~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~ 1171 (1304)
+.....++.|..|+-|.-+++.++. +++... ..++-+..+...++++..=|.--+++ -++-+...+++|+...
T Consensus 111 ~L~~dlEelR~~L~Py~~el~~~l~~~~eelr~kL~Py~~EL~~~~~~~~eeLr~~L~py~ee-Lr~kl~~~veelr~~L 189 (307)
T 2l7b_A 111 RLGADMEDVCGRLVQYRGEVQAMLGQSTEELRVRLASHLRKLRKRLLRDADDLQKRLAVYQAG-AREGAERGLSAIRERL 189 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSSCCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSC-CSSHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHhhHHHH-HHHHHHHHHHHHHHHh
Confidence 3445677888889999988888886 233322 24556777777777777777544333 2556777888888888
Q ss_pred chHHHHHHhhc-------------cChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHH
Q psy7140 1172 DPVKMRAMEYA-------------MRPNILEEYKHSVQSAKNIVDAAFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKV 1238 (1304)
Q Consensus 1172 ~~i~~R~~e~~-------------~rp~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~ 1238 (1304)
.|...-+.... ..-..++.|+..|.-+.. .+...-....+..++=...+....++...=+....
T Consensus 190 ~Py~e~~~~~~~~v~~~k~~~L~~ki~~~~e~Lr~~L~p~~~---~~~~~l~~l~~q~ee~~~ql~~~aeel~~kl~~~~ 266 (307)
T 2l7b_A 190 GPLVEQGRVRAATVGSLAGQPLQERAQAWGERLRARMEEMGS---RTRDRLDEVKEQVAEVRAKLEEQAQQIRLQAEAAQ 266 (307)
T ss_dssp SSSCTTTTTHHHHHHHHHCCCCSSCSCCHHHHHHHHHHHHHH---TCSCSSCCCCSSCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHhhhhhhhhHHHHHHHHHhHHHHHHHHHHHHH---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHhHH
Confidence 77543222211 122345677776665443 22223344445555555556666666555555443
Q ss_pred H
Q psy7140 1239 S 1239 (1304)
Q Consensus 1239 ~ 1239 (1304)
+
T Consensus 267 e 267 (307)
T 2l7b_A 267 A 267 (307)
T ss_dssp H
T ss_pred H
Confidence 3
No 204
>3zx3_A Ectonucleoside triphosphate diphosphohydrolase 1; domain rotation, purinergic signaling; 1.70A {Rattus norvegicus} PDB: 3zx2_A* 3zx0_A*
Probab=33.01 E-value=44 Score=38.86 Aligned_cols=44 Identities=14% Similarity=0.194 Sum_probs=26.1
Q ss_pred eeeeechhHHHHH-----HhccccCCCCCCCCCCcEEEEEEeCCceeEEEEEE
Q psy7140 726 VLRLINETTATAL-----AYGIYKQDLPEDDQNPRYVAFVDFGYSALQVCIAA 773 (1304)
Q Consensus 726 ~~~li~Ep~Aaal-----~y~~~~~~~~~~~~~~~~vlv~D~Gggt~dvsvv~ 773 (1304)
.+++|+...=+.+ .|.+.. +.. .....+.++|+|||+|.++...
T Consensus 151 ~v~iisG~eEg~y~wi~vnyllg~--l~~--~~~~t~g~lDlGGgStQi~f~~ 199 (452)
T 3zx3_A 151 GAKIITGQEEGAYGWITINYLLGR--FKT--PGGSTFGALDLGGASTQITFVP 199 (452)
T ss_dssp EEEECCHHHHHHHHHHHHHHHTTT--TC-----CCCCEEEEECSSEEEEEECC
T ss_pred ceEECCchhhhhhhHHHHHhhhcc--ccC--CCCCceEEEecCCCceEEEecc
Confidence 4678875544443 343322 110 1234578899999999998653
No 205
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=32.22 E-value=27 Score=37.65 Aligned_cols=21 Identities=24% Similarity=0.346 Sum_probs=18.7
Q ss_pred cEEEEEcCcccEEEEEEeCCc
Q psy7140 2 SVIGIDFGTESCYLSVAKSGG 22 (1304)
Q Consensus 2 ~viGID~GTt~s~va~~~~g~ 22 (1304)
.+++||+|+|+++++++.+++
T Consensus 3 MlL~IDIGNT~iK~gl~d~~~ 23 (266)
T 3djc_A 3 LILCIDVGNSHIYGGVFDGDE 23 (266)
T ss_dssp CEEEEEECSSEEEEEEEETTE
T ss_pred eEEEEEECCCeEEEEEEECCE
Confidence 489999999999999998763
No 206
>3cqy_A Anhydro-N-acetylmuramic acid kinase; APC7501, SO_1313, structural genomics, PSI-2, shewanella one MR-1, protein structure initiative; 2.30A {Shewanella oneidensis}
Probab=31.77 E-value=77 Score=35.64 Aligned_cols=68 Identities=7% Similarity=0.008 Sum_probs=42.5
Q ss_pred HHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCC-CCC----CCCCchhHHHHHHHHHhhH
Q psy7140 341 EHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHK-PPS----TTLNQDEAVSRGCALQCAI 412 (1304)
Q Consensus 341 ~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~-~~~----~~~np~eaVa~Gaa~~aa~ 412 (1304)
.-+.+=+...|.+.++... ..+.|+++||+++.|.+.+.|++.++. .+. ..++++-.=|..-|+.|..
T Consensus 270 ATLt~~TA~sIa~~~~~~~----~~~~v~vcGGGa~N~~Lm~~L~~~l~~~~v~~t~~~Gi~~d~~EA~aFA~LA~~ 342 (370)
T 3cqy_A 270 STLLDLTCHSIAQDILKLA----QEGELFVCGGGAFNAELMQRLAALLPGYRIDTTSALGVDPKWAEGIAFAWLAMR 342 (370)
T ss_dssp HHHHHHHHHHHHHHHHHHC----SSEEEEEESGGGGCHHHHHHHHHHCTTEEEEEGGGGTCCTTTHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcC----CCCEEEEECCCcCCHHHHHHHHHhCCCCeeeeHHHhCCChhHHHHHHHHHHHHH
Confidence 3333334445555554432 356899999999999999999999953 322 2345554444445666654
No 207
>1hjr_A Holliday junction resolvase (RUVC); site-specific recombinase; 2.50A {Escherichia coli} SCOP: c.55.3.6
Probab=31.45 E-value=43 Score=32.86 Aligned_cols=19 Identities=26% Similarity=0.415 Sum_probs=17.0
Q ss_pred ceEEEEEccCccEEEEEEE
Q psy7140 560 MSVIGIDFGTESCYLSVAK 578 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~ 578 (1304)
|.|+|||-|++++..++..
T Consensus 1 m~ILGIDPGl~~tG~gvi~ 19 (158)
T 1hjr_A 1 AIILGIDPGSRVTGYGVIR 19 (158)
T ss_dssp CEEEEEECCSSEEEEEEEE
T ss_pred CEEEEEccCCCCeeEEEEE
Confidence 5799999999999999875
No 208
>3djc_A Type III pantothenate kinase; structural genomics, putative transfera 2, protein structure initiative; 2.40A {Legionella pneumophila subsp}
Probab=31.17 E-value=29 Score=37.39 Aligned_cols=71 Identities=15% Similarity=0.116 Sum_probs=38.2
Q ss_pred ecHHHHHHHHHHHHHHHHHHHHHHHHhcCCC--CCceeEEEEecCCCCChhHHHHHHHHcCCCCCCCCCchhHHHhHHHH
Q psy7140 860 LKRNDLETLCEHIFGRIEICLNKCIAESKLP--VNAIHSIEIVGGSSRIPAFKNVIESVFHKPPSTTLNQDEAVSRGCAL 937 (1304)
Q Consensus 860 itr~efe~l~~~~~~~i~~~i~~~l~~~~~~--~~~I~~V~LvGG~srip~v~~~l~~~fg~~~~~~~n~~eava~Gaa~ 937 (1304)
+-++.-+.+-.-++......|+..+++..-. ...--.|+++||.++.-. .. +.....+|+ -+-.|..+
T Consensus 182 ~g~nT~~ai~sGi~~g~~g~i~~~i~~~~~~~~~~~~~~vi~TGG~a~~l~--~~-------~~~~~~~~~-LvL~GL~~ 251 (266)
T 3djc_A 182 VGRSTIESIQSGVYYGVLGACKELIQRIHHEAFNGDQILILATGGFASLFD--KQ-------GLYDHLVPD-LVLQGIRL 251 (266)
T ss_dssp CBSSHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTTCCEEEEEESTTGGGGT--TT-------TCCSEECTT-HHHHHHHH
T ss_pred CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhccCCCCEEEEECCChHHhc--cC-------CCCCEECcC-hHHHHHHH
Confidence 5566666666666666655555555432211 111147999999885321 11 111123554 57788776
Q ss_pred Hhh
Q psy7140 938 QCA 940 (1304)
Q Consensus 938 ~aa 940 (1304)
...
T Consensus 252 i~~ 254 (266)
T 3djc_A 252 AAM 254 (266)
T ss_dssp HHH
T ss_pred HHH
Confidence 543
No 209
>4ep4_A Crossover junction endodeoxyribonuclease RUVC; resolvase, hydrolase; 1.28A {Thermus thermophilus} PDB: 4ep5_A
Probab=30.09 E-value=19 Score=35.62 Aligned_cols=20 Identities=40% Similarity=0.403 Sum_probs=17.6
Q ss_pred ceEEEEEccCccEEEEEEEC
Q psy7140 560 MSVIGIDFGTESCYLSVAKS 579 (1304)
Q Consensus 560 ~~vvGID~Gtt~s~va~~~~ 579 (1304)
|.|+|||-|++++..++...
T Consensus 1 MrILGIDPGl~~tG~gvi~~ 20 (166)
T 4ep4_A 1 MVVAGIDPGITHLGLGVVAV 20 (166)
T ss_dssp CEEEEEECCSSEEEEEEEEE
T ss_pred CEEEEEccccCceEEEEEEe
Confidence 57999999999999998753
No 210
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=29.14 E-value=3.3e+02 Score=25.83 Aligned_cols=27 Identities=7% Similarity=-0.129 Sum_probs=17.5
Q ss_pred HHHHHHHHHHHHhccchHHHHHHhhcc
Q psy7140 1157 RSVYNDRLNSLRTVGDPVKMRAMEYAM 1183 (1304)
Q Consensus 1157 ~~~~~~kl~~L~~~~~~i~~R~~e~~~ 1183 (1304)
.+.+.+++..|......+..+..++..
T Consensus 14 a~~I~~r~~~l~~r~~~L~~~a~~R~~ 40 (149)
T 3f31_A 14 AEDIQERRQQVLDRYHRFKELSTLRRQ 40 (149)
T ss_dssp TTHHHHHHHHHHHHTCSCHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 446777777777777776666655543
No 211
>3f31_A Spectrin alpha chain, brain; LONE helix followed by A triple helical bundle, actin cappin binding, alternative splicing, calcium; 2.30A {Homo sapiens} SCOP: a.7.1.0
Probab=28.94 E-value=3.8e+02 Score=25.41 Aligned_cols=109 Identities=12% Similarity=0.202 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcC------CCCCHHHHHHHHHHHHhccchHHHHHH
Q psy7140 1106 AKNALEEYVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEG------QDVNRSVYNDRLNSLRTVGDPVKMRAM 1179 (1304)
Q Consensus 1106 akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g------~~a~~~~~~~kl~~L~~~~~~i~~R~~ 1179 (1304)
..+.|....-+-|.+|++.+ ....|...+++.+.||.+-- .-.+...+..++++-+.+...+..
T Consensus 27 r~~~L~~~a~~R~~~Le~s~-------~l~~F~~d~~el~~Wi~ek~~~~~~~~~~d~~~v~~~l~kH~afe~El~a--- 96 (149)
T 3f31_A 27 RYHRFKELSTLRRQKLEDSY-------RFQFFQRDAEELEKWIQEKLQIASDENYKDPTNLQGKLQKHQAFEAEVQA--- 96 (149)
T ss_dssp HTCSCHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHTTSCSSCSSSCHHHHHHHHHHHHHHHHH---
T ss_pred HHHHHHHHHHHHHHHHHHHH-------HHHHHHHHHHHHHHHHHHHHHHHcCcccCCHHHHHHHHHHHHHHHHHHHH---
Confidence 44445555555555554321 23567777788888886410 001222344444444444333322
Q ss_pred hhccChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHH
Q psy7140 1180 EYAMRPNILEEYKHSVQSAKNIVDAAFKGDDRFSHLSKQDLSTVETAIKQHVKWIEEKVS 1239 (1304)
Q Consensus 1180 e~~~rp~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~~~~Wl~~~~~ 1239 (1304)
+- ..+.......+.++.. .|+..+++..-.+.++..+.+|.+..+
T Consensus 97 ----~~---~~l~~v~~~g~~Li~~--------~~~~~~~I~~rl~~l~~~W~~L~~~~~ 141 (149)
T 3f31_A 97 ----NS---GAIVKLDETGNLMISE--------GHFASETIRTRLMELHRQWELLLEKMR 141 (149)
T ss_dssp ----TT---HHHHHHHHHHHHHHHH--------TCTTHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----HH---HHHHHHHHHHHHHHhc--------CCCcHHHHHHHHHHHHHHHHHHHHHHH
Confidence 11 1233344444555432 256777777777777777777776654
No 212
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=28.39 E-value=1.9e+02 Score=37.72 Aligned_cols=18 Identities=17% Similarity=0.283 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHHHHHhc
Q psy7140 1105 DAKNALEEYVYELRDGLA 1122 (1304)
Q Consensus 1105 ~akN~LEs~iy~~r~~L~ 1122 (1304)
+....||.-+-+++.+|+
T Consensus 921 ~~~~~LE~kl~eLq~rL~ 938 (1080)
T 2dfs_A 921 KLHIGLENKIMQLQRKID 938 (1080)
T ss_dssp ------------------
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 445666766666666665
No 213
>3ven_A O-carbamoyltransferase TOBZ; antibiotic biosynthesis, substrate assisted catalysis, subst channeling, adenylation; HET: TLA; 1.57A {Streptoalloteichus tenebrarius} PDB: 3veo_A 3ves_A* 3vet_A* 3vew_A* 3ver_A* 3vf4_A* 3vf2_A* 3vex_A* 3vez_A*
Probab=27.42 E-value=1.1e+02 Score=36.66 Aligned_cols=67 Identities=13% Similarity=0.068 Sum_probs=47.7
Q ss_pred HHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCC-CCC-CCCCchhHHHhHHHHHhhHhcCC
Q psy7140 874 GRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHK-PPS-TTLNQDEAVSRGCALQCAILSPA 945 (1304)
Q Consensus 874 ~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~-~~~-~~~n~~eava~Gaa~~aa~ls~~ 945 (1304)
+-+.+.+.++.+..+ ++.|.|.||.+....+++.|.+..+. .+. .+.--|.++++|+|+++....+.
T Consensus 293 ~~L~~~~~~a~~~tg-----~~~l~LaGGVa~N~~L~~~l~~~~~~~~v~vpp~~~D~G~aiGqA~~a~~~~g~ 361 (576)
T 3ven_A 293 RAVFGLADSVLARTG-----ERTLFVAGGVGLNATMNGKLLTRSTVDKMFVPPVASDIGVSLGAAAAVAVELGD 361 (576)
T ss_dssp HHHHHHHHHHHHHHT-----CSEEEEESGGGGCHHHHHHHHTSTTCSEEECCTTCSGGGHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHcC-----CCeEEecchHHHHHHHHHHHHHhcCCCeEEeCCCCCchHHHHHHHHHHHHHcCC
Confidence 334455555555554 57999999999999999999876553 221 23456889999999998766443
No 214
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=27.11 E-value=3.1e+02 Score=31.19 Aligned_cols=45 Identities=13% Similarity=0.215 Sum_probs=32.8
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCC-CChhHHHHHHHHc
Q psy7140 869 CEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSS-RIPAFKNVIESVF 917 (1304)
Q Consensus 869 ~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~s-rip~v~~~l~~~f 917 (1304)
++-++.++.+.|-..... ...+|.|+++||-+ ..+.|++.+.+.+
T Consensus 310 ~d~f~yri~k~IGa~aa~----LggvDaIVFTgGIGEns~~vR~~i~~~l 355 (415)
T 2e1z_A 310 IKTFVHRIARHIAGHAAS----LHRLDGIIFTGGIGENSVLIRQLVIEHL 355 (415)
T ss_dssp HHHHHHHHHHHHHHHHTT----CSSCCEEEEEHHHHHHCHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHH----hCCCCEEEECccccccCHHHHHHHHhhH
Confidence 334455555555554432 25689999999999 9999999999876
No 215
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=26.44 E-value=1.6e+02 Score=34.47 Aligned_cols=29 Identities=14% Similarity=0.189 Sum_probs=23.0
Q ss_pred CcEEEEEEecCCeEEEEEEEEECC-eEEEE
Q psy7140 225 PRYVAFVDFGYSALQVCIAAFVKG-KLKVL 253 (1304)
Q Consensus 225 ~~~vlV~D~GggT~dvsv~~~~~~-~~~v~ 253 (1304)
...+|.+|+||.++-+.++++.+. .+++.
T Consensus 79 ~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~ 108 (485)
T 3o8m_A 79 TGDFLALDLGGTNLRVVLVKLGGNHDFDTT 108 (485)
T ss_dssp EEEEEEEEESSSEEEEEEEEEESSSCEEEE
T ss_pred ceEEEEEEecCCeEEEEEEEECCCCceEEE
Confidence 356899999999999999999764 34444
No 216
>3pdy_A Plectin; cytoskeleton, plakin, intermediate filament, spectrin repeat structural protein, crosslinking; 2.22A {Homo sapiens}
Probab=26.38 E-value=5.1e+02 Score=26.10 Aligned_cols=49 Identities=12% Similarity=0.207 Sum_probs=30.4
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHHHHHHHH
Q psy7140 1219 DLSTVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKYKFEKSV 1268 (1304)
Q Consensus 1219 e~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 1268 (1304)
.+..+...+.+...|++++...-...... ++.-.+.-+..|...|+..+
T Consensus 106 ~L~~f~~~~~~~~~Wl~eke~~~~s~d~g-~~~~~v~~l~~k~~~f~~el 154 (210)
T 3pdy_A 106 SLHSFVAAATKELMWLNEKEEEEVGFDWS-DRNTNMTAKKESYSALMREL 154 (210)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHSCCS-TTSCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHccccC-CCchhHHHHHHHHHHHHHHH
Confidence 45667778888899999988766553332 34445555555555544443
No 217
>1g99_A Acetate kinase; alpha/beta, askha (acetate and sugar kinases, HSC70, actin) superfamily, conserved epsilon conformation; HET: ADP; 2.50A {Methanosarcina thermophila} SCOP: c.55.1.2 c.55.1.2 PDB: 1tuu_A* 1tuy_A*
Probab=26.26 E-value=2.3e+02 Score=32.14 Aligned_cols=45 Identities=11% Similarity=0.120 Sum_probs=33.5
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCC-CChhHHHHHHHHc
Q psy7140 869 CEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSS-RIPAFKNVIESVF 917 (1304)
Q Consensus 869 ~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~s-rip~v~~~l~~~f 917 (1304)
++-++.++.+.|-...... ..+|.|+++||-+ +.+.|++.+.+.+
T Consensus 302 ~d~f~yri~k~IGa~~a~L----ggvDaiVFTgGIGEns~~vR~~i~~~l 347 (408)
T 1g99_A 302 LEIFAYKVKKFIGEYSAVL----NGADAVVFTAGIGENSASIRKRILTGL 347 (408)
T ss_dssp HHHHHHHHHHHHHHHHHHT----TSCSEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHhh----CCCCEEEECccccccCHHHHHHHHhhh
Confidence 3445556666665555433 3589999999999 9999999999775
No 218
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=26.00 E-value=66 Score=35.40 Aligned_cols=50 Identities=8% Similarity=0.078 Sum_probs=40.7
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCC
Q psy7140 868 LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP 920 (1304)
Q Consensus 868 l~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~ 920 (1304)
+.....+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 212 ~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 212 VFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 344456678889999999999999999999999998765 45788888754
No 219
>3uun_A Dystrophin; triple helical, cell structure and stability, cytoskeletal, structural protein; 2.30A {Homo sapiens}
Probab=25.73 E-value=85 Score=28.39 Aligned_cols=24 Identities=21% Similarity=0.498 Sum_probs=16.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhc
Q psy7140 1219 DLSTVETAIKQHVKWIEEKVSKLK 1242 (1304)
Q Consensus 1219 e~~~l~~~~~~~~~Wl~~~~~~q~ 1242 (1304)
++..+...+++...||.++.....
T Consensus 3 ~L~~F~~~l~el~~WL~~~e~~l~ 26 (119)
T 3uun_A 3 NLDRYQTALEEVLSWLLSAEDTLQ 26 (119)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHh
Confidence 466677778888888877655443
No 220
>2e1z_A Propionate kinase; TDCD, native, acetate kinase, nucleotide, AP4A, ADP, ATP, AMPPNP, transferase; HET: B4P; 1.98A {Salmonella typhimurium} SCOP: c.55.1.2 c.55.1.2 PDB: 1x3n_A* 2e1y_A 1x3m_A* 2e20_A*
Probab=25.59 E-value=6.4e+02 Score=28.61 Aligned_cols=47 Identities=15% Similarity=0.203 Sum_probs=34.4
Q ss_pred HHHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCC-CchhHHHHHHHhcC
Q psy7140 339 LCEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSS-RIPAFKNVIESVFH 389 (1304)
Q Consensus 339 ~~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~s-r~p~v~~~l~~~f~ 389 (1304)
.++-++.++.+.|-.... .+ ..+|.|+++||-+ ..+.||+.+.+.++
T Consensus 309 A~d~f~yri~k~IGa~aa--~L--ggvDaIVFTgGIGEns~~vR~~i~~~l~ 356 (415)
T 2e1z_A 309 AIKTFVHRIARHIAGHAA--SL--HRLDGIIFTGGIGENSVLIRQLVIEHLG 356 (415)
T ss_dssp HHHHHHHHHHHHHHHHHT--TC--SSCCEEEEEHHHHHHCHHHHHHHHHTTG
T ss_pred HHHHHHHHHHHHHHHHHH--Hh--CCCCEEEECccccccCHHHHHHHHhhHh
Confidence 344455666666655443 22 4689999999999 99999999998764
No 221
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=24.78 E-value=2.6e+02 Score=32.46 Aligned_cols=51 Identities=8% Similarity=0.001 Sum_probs=32.6
Q ss_pred CcEEEEEEecCCeEEEEEEEEECCe---EEEEEEecCCCc---ccHHHHHHHHHHHH
Q psy7140 225 PRYVAFVDFGYSALQVCIAAFVKGK---LKVLSNVCDSEI---GGRNIDKILAEYIS 275 (1304)
Q Consensus 225 ~~~vlV~D~GggT~dvsv~~~~~~~---~~v~~~~~~~~l---GG~~~D~~l~~~l~ 275 (1304)
...++.+|+||.++-+.++...+.. ++.....-...+ +|+++=..|++.+.
T Consensus 60 ~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 116 (457)
T 2yhx_A 60 AGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNA 116 (457)
T ss_dssp CEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHH
T ss_pred cceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHH
Confidence 4457899999999999999987654 222222222232 56666556665554
No 222
>2aa4_A Mannac kinase, putative N-acetylmannosamine kinase; sugar methabolism, structural genomics, PSI, protein structure initiative; 2.20A {Escherichia coli} SCOP: c.55.1.10 c.55.1.10
Probab=23.80 E-value=78 Score=34.22 Aligned_cols=46 Identities=13% Similarity=0.174 Sum_probs=32.3
Q ss_pred ccEEEEEcCCCCchhHHHHHHHhcCCC-------CCCCCCchhHHHHHHHHHh
Q psy7140 365 IHSIEIVGGSSRIPAFKNVIESVFHKP-------PSTTLNQDEAVSRGCALQC 410 (1304)
Q Consensus 365 i~~ViLvGG~sr~p~v~~~l~~~f~~~-------~~~~~np~eaVa~Gaa~~a 410 (1304)
.+.|+|.||.+..|.+.+.+++.+... +..+...+.+.++|||..+
T Consensus 234 p~~ivlgG~~~~~~~~~~~l~~~l~~~~~~~~~~i~~~~~~~~a~~~GAa~l~ 286 (289)
T 2aa4_A 234 CQCVVVGGSVGLAEGYLALVETYLAQEPAAFHVDLLAAHYRHDAGLLGAALLA 286 (289)
T ss_dssp CSEEEEEHHHHTSTTHHHHHHHHHTTSCGGGCCEEEECSCSSCHHHHHHHHHH
T ss_pred CCEEEEeCcccccHHHHHHHHHHHHHhcCccCCEEEECCCCCchHHHHHHHHH
Confidence 357888898887788888888776432 1223345678999999875
No 223
>3bex_A Type III pantothenate kinase; actin-like fold, ATP-binding, coenzyme A biosynthesis, cytoplasm, metal-binding, nucleotide-binding, potassium; HET: PAU; 1.51A {Thermotoga maritima} SCOP: c.55.1.13 c.55.1.13 PDB: 3bf1_A* 3bf3_A* 2gtd_A
Probab=23.40 E-value=42 Score=35.76 Aligned_cols=19 Identities=21% Similarity=0.478 Sum_probs=17.0
Q ss_pred EEEEEccCccEEEEEEECC
Q psy7140 562 VIGIDFGTESCYLSVAKSG 580 (1304)
Q Consensus 562 vvGID~Gtt~s~va~~~~g 580 (1304)
.+.||+|+|+++.+++.++
T Consensus 5 ~L~IDIGNT~ik~gl~~~~ 23 (249)
T 3bex_A 5 YLLVDVGNTHSVFSITEDG 23 (249)
T ss_dssp EEEEEECSSEEEEEEESSS
T ss_pred EEEEEECCCeEEEEEEECC
Confidence 6899999999999999755
No 224
>3nmd_A CGMP dependent protein kinase; leucine zipper, coiled-coil, structural genomics, berkeley S genomics center, BSGC, dimerization; HET: MSE; 2.27A {Homo sapiens}
Probab=23.21 E-value=1.2e+02 Score=25.17 Aligned_cols=43 Identities=14% Similarity=0.088 Sum_probs=32.3
Q ss_pred HHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHhcchhccccC
Q psy7140 1087 FELECKMQDNDRQEKDRVDAKNALEEYVYELRDGLANDKADFIT 1130 (1304)
Q Consensus 1087 ~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~L~~~~~~~~~ 1130 (1304)
.++.+++...|...++.+....+.|+.|-++|..|+ .|..+++
T Consensus 29 ~~K~eELr~kd~~I~eLEk~L~ekd~eI~~LqseLD-KfrSVl~ 71 (72)
T 3nmd_A 29 QEKIEELRQRDALIDELELELDQKDELIQMLQNELD-KYRSVIR 71 (72)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HTTTTTC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HhhccCC
Confidence 345567778888888888888888888888888885 4555443
No 225
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*
Probab=22.83 E-value=73 Score=35.02 Aligned_cols=49 Identities=8% Similarity=0.068 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCCchhHHHHHHHhcCCC
Q psy7140 340 CEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP 391 (1304)
Q Consensus 340 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr~p~v~~~l~~~f~~~ 391 (1304)
.+...+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||..
T Consensus 213 ~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~---~d~i~~~lg~~ 261 (317)
T 1hnj_A 213 FKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLRI---ISATAKKLGMS 261 (317)
T ss_dssp HHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 33445567788999999999999999999999988765 45688888743
No 226
>4ijn_A Acetate kinase, acetokinase; proprionate kinase, ATP-dependent, metabolic intermediate biosynthesis, acetyl-COA biosynthesis, hydrolysis; HET: AMP; 1.70A {Mycobacterium smegmatis}
Probab=22.77 E-value=1.8e+02 Score=32.86 Aligned_cols=45 Identities=11% Similarity=0.192 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCC-CChhHHHHHHHHc
Q psy7140 869 CEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSS-RIPAFKNVIESVF 917 (1304)
Q Consensus 869 ~~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~s-rip~v~~~l~~~f 917 (1304)
++-++.++...|-...... ..+|.|+++||-+ +.+.|++.+.+.+
T Consensus 303 ~d~f~yriak~Iga~aa~L----G~vDaIVfTGGIgEns~~vr~~I~~~l 348 (398)
T 4ijn_A 303 YDVYIHRLRKYIGAYMAVL----GRTDVISFTAGVGENVPPVRRDALAGL 348 (398)
T ss_dssp HHHHHHHHHHHHHHHHHHH----SSCCEEEEEHHHHHHCHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHHh----CCCcEEEECCccccccHHHHHHHHHHH
Confidence 3444555555554443332 3579999999988 5788999998775
No 227
>2iak_A Bullous pemphigoid antigen 1, isoform 5; triple helical bundle, spectrin repeat, cell adhesion; 3.00A {Mus musculus}
Probab=22.66 E-value=1.4e+02 Score=30.89 Aligned_cols=26 Identities=19% Similarity=0.312 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhccC
Q psy7140 1219 DLSTVETAIKQHVKWIEEKVSKLKSL 1244 (1304)
Q Consensus 1219 e~~~l~~~~~~~~~Wl~~~~~~q~~~ 1244 (1304)
.+..+...+++...|++++.......
T Consensus 121 ~l~~F~~~~~~~~~Wi~eke~~~~s~ 146 (224)
T 2iak_A 121 TLHNFVTRATNELIWLNEKEESEVAY 146 (224)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 56667778888889999888765443
No 228
>3cet_A Conserved archaeal protein; Q6M145, MRR63, NESG, XRAY, structure, structural genomics, PSI-2, protein structure initiative; 1.80A {Methanococcus maripaludis S2} PDB: 3c0b_A
Probab=22.65 E-value=44 Score=36.92 Aligned_cols=70 Identities=11% Similarity=-0.072 Sum_probs=37.5
Q ss_pred cHHHHHHHHHHH----HHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCC----CCCCCCchhHHH
Q psy7140 861 KRNDLETLCEHI----FGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP----PSTTLNQDEAVS 932 (1304)
Q Consensus 861 tr~efe~l~~~~----~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~----~~~~~n~~eava 932 (1304)
+.++.+++.+.+ +++|.+.+.+++.+.++ ..|+.+||+ +++-..+.+.+... ...+.+.+-+-|
T Consensus 244 ~~~~~~~lA~~~~~~q~~~I~~av~~v~~~~~~-----~~vv~aG~G---~~L~~~la~~~~~~~~~~~i~~~~s~vapA 315 (334)
T 3cet_A 244 SEIDAENIAKNYYELWKELILENVENVAEKYGS-----KKVVITGLG---ENILKDALADFEVISVAERYGKDVSLATPS 315 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC-----CEEEEESTT---HHHHHHHTTTSEEEEHHHHHCHHHHHSHHH
T ss_pred ChhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----CeEEEeCCc---HHHHHHHHhhCCeeehhcccCcccccccCH
Confidence 556666665554 45555555666655443 378999987 35555554331100 000122455677
Q ss_pred hHHHHH
Q psy7140 933 RGCALQ 938 (1304)
Q Consensus 933 ~Gaa~~ 938 (1304)
.|+|+.
T Consensus 316 ~avA~l 321 (334)
T 3cet_A 316 FAVAEL 321 (334)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 888754
No 229
>3s5m_A Falcilysin; M16 metalloprotease, peptidase, hydrolase; 1.55A {Plasmodium falciparum} PDB: 3s5i_A 3s5k_A 3s5h_A
Probab=22.39 E-value=2.3e+02 Score=37.37 Aligned_cols=128 Identities=10% Similarity=0.068 Sum_probs=66.7
Q ss_pred HHHHHhhhccCchhHHHHHHHHHHHHHHHHHHHHHhcchhccccCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHH
Q psy7140 1086 LFELECKMQDNDRQEKDRVDAKNALEEYVYELRDGLANDKADFITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLN 1165 (1304)
Q Consensus 1086 ~~~~~~~~~~~D~~~~~~~~akN~LEs~iy~~r~~L~~~~~~~~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~ 1165 (1304)
..+.++++....-...+.+.++|.+|.-. |..-. -++ .-+.-...-...|+|+. +-...-.|.+.++
T Consensus 486 I~~~L~~l~~~gi~~~ele~a~~~le~~~---re~~~------~~~---~gl~~~~~~~~~w~~~~-dp~~~l~~~~~l~ 552 (1193)
T 3s5m_A 486 IMNALKKVVKEGFNKSAVEASINNIEFIL---KEANL------KTS---KSIDFVFEMTSKLNYNR-DPLLIFEFEKYLN 552 (1193)
T ss_dssp HHHHHHHHHHHCCCHHHHHHHHHHHHHHH---HHHTT------STT---HHHHHHHHHHHHHHTTC-CTTTTTSHHHHHH
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHH---HhccC------CCC---cHHHHHHHHHHHHHcCC-CHHHHHHHHHHHH
Confidence 33445555555445566677888888643 32100 011 22333445677899964 2223334667777
Q ss_pred HHHhcc----chHHHHHHhhc--c--------ChhH--HHHHHHHHHHHHHHHHHHhcCCCCCCCCChhhHHHHHHHHHH
Q psy7140 1166 SLRTVG----DPVKMRAMEYA--M--------RPNI--LEEYKHSVQSAKNIVDAAFKGDDRFSHLSKQDLSTVETAIKQ 1229 (1304)
Q Consensus 1166 ~L~~~~----~~i~~R~~e~~--~--------rp~~--~~~l~~~l~~~~~~~~~~~~~~~~~~~~t~~e~~~l~~~~~~ 1229 (1304)
+|+... .-+..-+.++- . .|.. .++..+. -++.++... +.+|++|++.|.+...+
T Consensus 553 ~l~~~~~~~~~~~~~li~~yll~n~~~~~~~~~P~~~~~~~~~~~---e~~~L~~~~------~~ls~~~~~~i~~~~~~ 623 (1193)
T 3s5m_A 553 IVKNKIKNEPMYLEKFVEKHFINNAHRSVILLEGDENYAQEQENL---EKQELKKRI------ENFNEQEKEQVIKNFEE 623 (1193)
T ss_dssp HHHHHHHHSTTHHHHHHHHHTTTCCCEEEEEEEEESSHHHHHHHH---HHHHHHHHH------HHCCHHHHHHHHHHHHH
T ss_pred HHHHHhhcChHHHHHHHHHHhccCCceEEEEEEcCCCHHHHHHHH---HHHHHHHHH------hhCCHHHHHHHHHHHHH
Confidence 777653 12333233322 1 2221 1222111 112222222 34799999999999999
Q ss_pred HHHHHH
Q psy7140 1230 HVKWIE 1235 (1304)
Q Consensus 1230 ~~~Wl~ 1235 (1304)
.++|-+
T Consensus 624 L~~~q~ 629 (1193)
T 3s5m_A 624 LSKYKN 629 (1193)
T ss_dssp HHHHHH
T ss_pred HHHHHh
Confidence 988876
No 230
>1zc6_A Probable N-acetylglucosamine kinase; NESG, Q7NU07_chrvo, CVR23, struc genomics, PSI, protein structure initiative; 2.20A {Chromobacterium violaceum} SCOP: c.55.1.5 c.55.1.5
Probab=22.24 E-value=50 Score=36.21 Aligned_cols=63 Identities=6% Similarity=-0.002 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHHHHHHhCCCCCCcccEEEEEcCCCC--chhHHHHHHHhcCCCCCCCCCchhHHHHHHHHHhh
Q psy7140 340 CEHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSR--IPAFKNVIESVFHKPPSTTLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 340 ~~~~~~~i~~~i~~~l~~~~~~~~~i~~ViLvGG~sr--~p~v~~~l~~~f~~~~~~~~np~eaVa~Gaa~~aa 411 (1304)
+..++++....+-..+...-. . +.+.|+|.||.+. .|.+.+.+++.+- -|+.+.++|||++|.
T Consensus 228 A~~i~~~~~~~L~~~l~~l~~-~-~p~~VvlgGgv~~~~~~~l~~~l~~~i~-------~~~~~~~~GAa~la~ 292 (305)
T 1zc6_A 228 ADALLRQAGEDAWAIARALDP-Q-DELPVALCGGLGQALRDWLPPGFRQRLV-------APQGDSAQGALLLLQ 292 (305)
T ss_dssp HHHHHHHHHHHHHHHHHHHCT-T-CCSCEEEESHHHHHTGGGSCHHHHHHCC-------CCSSCHHHHHHHHTC
T ss_pred HHHHHHHHHHHHHHHHHHHhc-C-CCCeEEEECCchHhHHHHHHHHHHhhcc-------CCCCCHHHHHHHHHh
Confidence 333444444444444433221 2 5578999999864 5677777777531 256778999999874
No 231
>3o8m_A Hexokinase; rnaseh-like fold, glycolysis, glucose repression binding, MIG1 binding, transferase; HET: GLC BGC; 1.42A {Kluyveromyces lactis} PDB: 3o1b_A 3o08_A* 3o1w_A* 3o5b_A* 3o4w_A 3o80_A* 3o6w_A* 1ig8_A 3b8a_X*
Probab=21.98 E-value=1.9e+02 Score=33.90 Aligned_cols=31 Identities=13% Similarity=0.189 Sum_probs=24.3
Q ss_pred CCcEEEEEEeCCceeEEEEEEEECC-eEEEEE
Q psy7140 753 NPRYVAFVDFGYSALQVCIAAFVKG-KLKVLS 783 (1304)
Q Consensus 753 ~~~~vlv~D~Gggt~dvsvv~~~~~-~~~v~~ 783 (1304)
+...+|.+|+||.++-+.++++.+. .+++..
T Consensus 78 E~G~~LalDlGGTn~Rv~~V~l~g~~~~~~~~ 109 (485)
T 3o8m_A 78 ETGDFLALDLGGTNLRVVLVKLGGNHDFDTTQ 109 (485)
T ss_dssp CEEEEEEEEESSSEEEEEEEEEESSSCEEEEE
T ss_pred cceEEEEEEecCCeEEEEEEEECCCCceEEEE
Confidence 3457899999999999999999865 444443
No 232
>3lbx_B Beta-I spectrin, spectrin beta chain, erythrocyte; tetramer, complex, three-helix bundle, alpha helix repeat, helical linker, actin capping; 2.80A {Homo sapiens}
Probab=21.71 E-value=5.8e+02 Score=25.01 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=27.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHHHHHHHH
Q psy7140 1220 LSTVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKYKFEKSV 1268 (1304)
Q Consensus 1220 ~~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 1268 (1304)
+..+...++....||..+.......+ .-+.+-.+..+..|.+.++..+
T Consensus 112 l~~F~~d~~~~~~Wl~~~e~~L~~~~-~g~sl~~ve~LlkkH~~fe~~l 159 (185)
T 3lbx_B 112 VCQFSRDASVAEAWLIAQEPYLASGD-FGHTVDSVEKLIKRHEAFEKST 159 (185)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCC-CCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHHHHHhHhhhccCC-CCCCHHHHHHHHHHHHHHHHHH
Confidence 44566788999999998776554422 2222333444444444444443
No 233
>2yhx_A Hexokinase B; transferase(phosphoryl,alcohol acceptr); HET: OTG; 2.10A {Saccharomyces cerevisiae} SCOP: i.12.1.1 PDB: 1hkg_A
Probab=21.41 E-value=3.1e+02 Score=31.86 Aligned_cols=52 Identities=8% Similarity=0.005 Sum_probs=32.8
Q ss_pred CCcEEEEEEeCCceeEEEEEEEECCe---EEEEEEecCCCC---CcHHHHHHHHHHHH
Q psy7140 753 NPRYVAFVDFGYSALQVCIAAFVKGK---LKVLSNVCDSEI---GGRNIDKILAEYIS 804 (1304)
Q Consensus 753 ~~~~vlv~D~Gggt~dvsvv~~~~~~---~~v~~~~~~~~l---GG~~~D~~l~~~l~ 804 (1304)
....++.+|+||.++-+.++...+.. +......-...+ +|..+=..|++.+.
T Consensus 59 E~G~~laiDlGGTnirv~lV~~~G~~~~~~~~~~~~ip~~~~~~~~~~lfd~Ia~~i~ 116 (457)
T 2yhx_A 59 QAGSFLAIVMGGGDLEVILISLAGRQESSIXASRSLAAAMSTTAIPSDLWGNXAXSNA 116 (457)
T ss_dssp CCEEEEEEEECSSEEEEEEEEEETTEEEEEEEEEECCTTTTSCSCTHHHHHHHHHHHH
T ss_pred ccceEEEEEeCCCeEEEEEEEeCCCeeEEEeeEEEEcCCccCCCCHHHHHHHHHHHHH
Confidence 34567999999999999999988654 222222222232 55655555555554
No 234
>3f9m_A Glucokinase; hexokinase IV, ATP-binding, diabetes mellitus, mutation, glycolysis, nucleotide-binding, transfera; HET: GLC MRK; 1.50A {Homo sapiens} PDB: 3fgu_A* 3id8_A* 3idh_A* 3vev_A* 3vf6_A* 3qic_A* 3s41_A* 4dhy_A* 4dch_A* 3vey_A* 1v4s_A* 3a0i_X* 3fr0_A* 3goi_A* 3imx_A* 3h1v_X* 1v4t_A*
Probab=21.30 E-value=2.5e+02 Score=32.74 Aligned_cols=52 Identities=19% Similarity=0.289 Sum_probs=33.6
Q ss_pred CCcEEEEEEeCCceeEEEEEEEECC-----eEEEEEEecCCC----CCcHHHHHHHHHHHHHHH
Q psy7140 753 NPRYVAFVDFGYSALQVCIAAFVKG-----KLKVLSNVCDSE----IGGRNIDKILAEYISTDF 807 (1304)
Q Consensus 753 ~~~~vlv~D~Gggt~dvsvv~~~~~-----~~~v~~~~~~~~----lGG~~~D~~l~~~l~~~~ 807 (1304)
....+|.+|+||+++-|.+|++.++ .+++....+..+ .| . ...|.+|+.+.+
T Consensus 75 E~G~fLAlDlGGTNfRV~~V~L~g~~~~~~~~~~~~~~~~Ip~~l~~g-t--~~eLFd~IA~~i 135 (470)
T 3f9m_A 75 EVGDFLSLDLGGTNFRVMLVKVGEGEEGQWSVKTKHQMYSIPEDAMTG-T--AEMLFDYISECI 135 (470)
T ss_dssp CCEEEEEEEESSSEEEEEEEEEEC----CEEEEEEEEEEECCHHHHSS-B--HHHHHHHHHHHH
T ss_pred cceEEEEEEecCceEEEEEEEECCCCCCcceEEEEEEeecCChHhccC-C--HHHHHHHHHHHH
Confidence 3467899999999999999999864 355554444322 22 1 245666665544
No 235
>1u5p_A Spectrin alpha chain, brain; alpha spectrin, two repeats of spectrin, alpha-helical linker region, 3-helix coiled coil, structural protein; 2.00A {Gallus gallus} SCOP: a.7.1.1 a.7.1.1
Probab=20.71 E-value=6.4e+02 Score=25.16 Aligned_cols=47 Identities=15% Similarity=0.249 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCCccCHHHHHHHHHHHHHHH
Q psy7140 1221 STVETAIKQHVKWIEEKVSKLKSLPKHENPPITCDQIREEKYKFEKSV 1268 (1304)
Q Consensus 1221 ~~l~~~~~~~~~Wl~~~~~~q~~~~~~~dP~~~~~di~~k~~~l~~~~ 1268 (1304)
..+...+++...|+.++...-.. +.+-+-.-.+..+.+|.+.|+..+
T Consensus 112 ~qf~~~~~~~~~Wl~e~e~~~~~-~~~g~dl~~v~~ll~kh~~~~~el 158 (216)
T 1u5p_A 112 HQFFRDMDDEESWIKEKKLLVSS-EDYGRDLTGVQNLRKKHKRLEAEL 158 (216)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTC-CCCCSSHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHHHHHHHhcC-cccCCCHHHHHHHHHHHHHHHHHH
Confidence 34566788888888887654333 222222334444444554444443
No 236
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2
Probab=20.37 E-value=84 Score=34.60 Aligned_cols=48 Identities=13% Similarity=0.102 Sum_probs=39.1
Q ss_pred HHHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCC
Q psy7140 870 EHIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP 920 (1304)
Q Consensus 870 ~~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~ 920 (1304)
.-..+.+...++++|+++++++++|+.|+.-|+++++ -+.+.+.||.+
T Consensus 216 ~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~d~~~~~lg~~ 263 (322)
T 1ub7_A 216 KFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLRI---IDAARERLGLP 263 (322)
T ss_dssp HHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHTTTCC
T ss_pred HHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHcCCC
Confidence 3455677888999999999999999999999988765 34688888754
No 237
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}
Probab=20.22 E-value=91 Score=34.02 Aligned_cols=47 Identities=11% Similarity=0.146 Sum_probs=38.5
Q ss_pred HHHHHHHHHHHHHHHhcCCCCCceeEEEEecCCCCChhHHHHHHHHcCCC
Q psy7140 871 HIFGRIEICLNKCIAESKLPVNAIHSIEIVGGSSRIPAFKNVIESVFHKP 920 (1304)
Q Consensus 871 ~~~~~i~~~i~~~l~~~~~~~~~I~~V~LvGG~srip~v~~~l~~~fg~~ 920 (1304)
...+.+...++++|+++++++++|+.|++-|+++++ -+.+.+.||.+
T Consensus 207 ~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~---~~~~~~~lg~~ 253 (309)
T 2ebd_A 207 VAVRSMEEVCREVLEKAGVKPEEVSLVIPHQANVRI---INALAEKLNIP 253 (309)
T ss_dssp HHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHHH---HHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH---HHHHHHHhCCC
Confidence 445677788999999999999999999999988765 34678888754
No 238
>2a01_A Apolipoprotein A-I; four-helix bundle, lipid transport; HET: AC9; 2.40A {Homo sapiens} PDB: 3k2s_A* 1av1_A 3j00_0*
Probab=20.18 E-value=65 Score=34.08 Aligned_cols=71 Identities=18% Similarity=0.232 Sum_probs=40.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhc---chhccc---cCHHhHHHHHHHHHHHHHHHhhcCCCCCHHHHHHHHHHHHhccch
Q psy7140 1102 DRVDAKNALEEYVYELRDGLA---NDKADF---ITDSNRNVLNKKLDETENWLYEEGQDVNRSVYNDRLNSLRTVGDP 1173 (1304)
Q Consensus 1102 ~~~~akN~LEs~iy~~r~~L~---~~~~~~---~~~~er~~i~~~l~e~~~WL~~~g~~a~~~~~~~kl~~L~~~~~~ 1173 (1304)
..++-|..|+.|+-++|.++. +.+... ..++-|.++...++++.+=|..- .+.-+..+..++.+|+....|
T Consensus 111 ~~eelr~~L~P~~eel~~~~~~~~eel~~~L~p~~eelr~kl~~~veelk~~l~P~-~ee~r~kl~~~~~el~~~l~p 187 (243)
T 2a01_A 111 EMELYRQKVEPLRAELQEGARQKLHELQEKLSPLGEEMRDRARAHVDALRTHLAPY-SDELRQRLAARLEALKENGGA 187 (243)
T ss_dssp HHHHHHTTHHHHHHHHHHHHHHHHHHHCCSCCSSTHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHhh-HHHHHHHHHHHHHHHHHhcch
Confidence 445677778888888877775 333322 24666777777777777766321 011123344455555554444
No 239
>1saz_A Probable butyrate kinase 2; askha (acetate and sugar kinases, HSC70, actin) superfamily, acetate kinase, isobutyrate kinase; HET: ACP; 2.50A {Thermotoga maritima} SCOP: c.55.1.2 c.55.1.2 PDB: 1x9j_A*
Probab=20.16 E-value=1.6e+02 Score=33.42 Aligned_cols=48 Identities=13% Similarity=0.048 Sum_probs=33.4
Q ss_pred cccEEEEEcCCCCchh-HHHHHHHhcCCC----CCCCCCchhHHHHHHHHHhh
Q psy7140 364 AIHSIEIVGGSSRIPA-FKNVIESVFHKP----PSTTLNQDEAVSRGCALQCA 411 (1304)
Q Consensus 364 ~i~~ViLvGG~sr~p~-v~~~l~~~f~~~----~~~~~np~eaVa~Gaa~~aa 411 (1304)
+++.|+|.||.+..+. +.+.|++.+... +.......++.++|||..+.
T Consensus 295 ~p~~IvlgGgi~~~~~~l~~~i~~~l~~~~~~~i~~~~~~~~a~~~GAa~l~~ 347 (381)
T 1saz_A 295 EVDFIVLTGGLAHEKEFLVPWITKRVSFIAPVLVFPGSNEEKALALSALRVLR 347 (381)
T ss_dssp CCSEEEEEEGGGGCTTTHHHHHHHHHTTTSCEEEEEBCCHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCcCccChHHHHHHHHHHHHhhcCeEEEecCcchhHHHHHHHHHHc
Confidence 4689999999987544 778888777532 12233334699999998764
Done!