BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy7142
         (1309 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q9H175|CSRN2_HUMAN Cysteine/serine-rich nuclear protein 2 OS=Homo sapiens GN=CSRNP2
           PE=1 SV=1
          Length = 543

 Score = 38.1 bits (87), Expect = 0.47,   Method: Compositional matrix adjust.
 Identities = 27/102 (26%), Positives = 48/102 (47%), Gaps = 20/102 (19%)

Query: 91  SRNAMWHRSCRLRFTSTRIR--------RLE---KRKSSLPAPPSPPPAPQISTTFTRSS 139
           SR+   + + R+ F   R+R        +LE   KR+ S PA P   P+P  S + T + 
Sbjct: 247 SRDGCGNMAGRIEFNPIRVRTHYLHTIMKLELESKRQVSRPAAPDEEPSPTASCSLTGAQ 306

Query: 140 STTPKDLKQYVCFLCTKTDVAEKLTNVMTLEAADTMRKWAWE 181
            +  +D +++         +AE  T VM L++A+ + +   E
Sbjct: 307 GSETQDFQEF---------IAENETAVMHLQSAEELERLKAE 339


>sp|Q6CIL8|RGT1_KLULA Glucose transport transcription regulator RGT1 OS=Kluyveromyces
           lactis (strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC
           1267 / NRRL Y-1140 / WM37) GN=RGT1 PE=3 SV=1
          Length = 1007

 Score = 37.7 bits (86), Expect = 0.67,   Method: Compositional matrix adjust.
 Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 13/103 (12%)

Query: 549 IPELLYSFSTVKPKF------LHNKNPPLPKCTEELANDLTKGLTMDSVYTKELHWLKHA 602
           IP L  +F ++K +F      L +    LP+ T EL   L+    M    T  +H L   
Sbjct: 776 IPGLFRAFLSIKRQFTDTLLDLPDAEGKLPEMTPELVTRLSN---MICDLTTTIHDLLK- 831

Query: 603 DEIVNTETNGSECLDVIPDNNNQSLDVSWAAFHASRHHAKSGI 645
              +N E N + CL++ PDN+ Q++D S A   A++    S I
Sbjct: 832 ---LNVEVNPTNCLELFPDNSMQTVDESSAHNSAAQSSDPSNI 871


>sp|P0CAI1|VF602_ASFP4 Protein B602L OS=African swine fever virus (isolate Tick/South
            Africa/Pretoriuskop Pr4/1996) GN=Pret-091 PE=3 SV=1
          Length = 570

 Score = 34.7 bits (78), Expect = 5.2,   Method: Compositional matrix adjust.
 Identities = 21/62 (33%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 1250 TCLPTIWKGCRDLVKCKCKTGCSSTSNCSCKRSNVD-CVPVLCSNC-NGCSNMSQLTLED 1307
            TC  T    C D     C + C+ST   +C  +NVD C     S C + C+N     L D
Sbjct: 188  TCADTNVDTCADTCASTCASTCASTCASTCADTNVDTCADTCVSTCASTCANTEYADLAD 247

Query: 1308 EE 1309
             E
Sbjct: 248  PE 249


>sp|Q9W517|WAPL_DROME Protein wings apart-like OS=Drosophila melanogaster GN=wapl PE=1
           SV=1
          Length = 1741

 Score = 33.9 bits (76), Expect = 9.6,   Method: Compositional matrix adjust.
 Identities = 48/257 (18%), Positives = 89/257 (34%), Gaps = 18/257 (7%)

Query: 678 LNEAYNSNSPQVTLEEWVKEQCVKSKTHRHLHHEQYPAFQNEFMSNVNKLKDTFTAAGNP 737
           +N  + + SP + L E   +Q   + +H H  H+ +P   +  +S   +    F +  + 
Sbjct: 531 INSEFKTPSPHLALSEANSQQAQHTPSHLHQLHQLHPQRGSAVISPTTRSDHDFDSQSSV 590

Query: 738 FQETSDELIS---LDSRVVSDEECVKMLRDSEARGILLYKTFVSERLSEGSKTNIFAPLK 794
               S +  S   L ++ V ++ CV   R S         + ++  L     +++ AP  
Sbjct: 591 LGSISSKGNSTPQLLAQAVQEDSCVIRSRGS---------SVITSDLETSQHSSLVAPPS 641

Query: 795 SNKIRIFNQMKKKRNTDKEMVHS-----LQNDVHLFQRCLTVSMNRKLDMENFFKHENST 849
             + R+ + M            +     LQ D+    R     +N   D E   + E+  
Sbjct: 642 DIESRLESMMMTIDGAGTGAASAVPETPLQEDILAVLRGEVPRLNGNTDPEP-TEEEDQQ 700

Query: 850 YPPSLSSNGHLRHALGKADILQPLEKLMNLERNTFSDRCDVVVCDGAALIHATPPRNSRT 909
             P  ++ G  R A    D+  P  +     R   +D     +       +    R SR 
Sbjct: 701 QQPKRATRGRGRKANNNVDVTPPATETRTRGRAKGADATTAAISPPTGKRNTRGTRGSRK 760

Query: 910 FEGYCSQEFQRTIMGMI 926
            E     E   T M  +
Sbjct: 761 AEQEVDMEVDETAMTTV 777


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.131    0.389 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 476,582,502
Number of Sequences: 539616
Number of extensions: 20071463
Number of successful extensions: 65841
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 51
Number of HSP's that attempted gapping in prelim test: 65708
Number of HSP's gapped (non-prelim): 171
length of query: 1309
length of database: 191,569,459
effective HSP length: 130
effective length of query: 1179
effective length of database: 121,419,379
effective search space: 143153447841
effective search space used: 143153447841
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 67 (30.4 bits)