BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7149
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F1M386|RPGF2_RAT Rap guanine nucleotide exchange factor 2 OS=Rattus norvegicus
GN=Rapgef2 PE=1 SV=2
Length = 1496
Score = 201 bits (512), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 114/138 (82%)
Query: 30 SLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKA 89
L+ +D VR+CLEKDP +RTDDDIEQLL+F L AF NMT++VR+ LC VMVFAVVE+A
Sbjct: 100 PLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERA 159
Query: 90 GTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCD 149
GTIV+NDGEELDSWSV++NG VEV DG++++L +G+SFG+ PTM+K Y +GVMRT+ D
Sbjct: 160 GTIVLNDGEELDSWSVILNGSVEVTYPDGKAEILCMGNSFGVSPTMDKEYMKGVMRTKVD 219
Query: 150 DCQFVCITQTDYYRIQHQ 167
DCQFVCI Q DY RI +Q
Sbjct: 220 DCQFVCIAQQDYCRILNQ 237
>sp|Q9Y4G8|RPGF2_HUMAN Rap guanine nucleotide exchange factor 2 OS=Homo sapiens GN=RAPGEF2
PE=1 SV=1
Length = 1499
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 114/138 (82%)
Query: 30 SLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKA 89
L+ +D VR+CLEKDP +RTDDDIEQLL+F L AF NMT++VR+ LC VMVFAVVE+A
Sbjct: 100 PLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERA 159
Query: 90 GTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCD 149
GTIV+NDGEELDSWSV++NG VEV DG++++L +G+SFG+ PTM+K Y +GVMRT+ D
Sbjct: 160 GTIVLNDGEELDSWSVILNGSVEVTYPDGKAEILCMGNSFGVSPTMDKEYMKGVMRTKVD 219
Query: 150 DCQFVCITQTDYYRIQHQ 167
DCQFVCI Q DY RI +Q
Sbjct: 220 DCQFVCIAQQDYCRILNQ 237
>sp|Q8CHG7|RPGF2_MOUSE Rap guanine nucleotide exchange factor 2 OS=Mus musculus GN=Rapgef2
PE=1 SV=2
Length = 1496
Score = 201 bits (511), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 91/138 (65%), Positives = 114/138 (82%)
Query: 30 SLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKA 89
L+ +D VR+CLEKDP +RTDDDIEQLL+F L AF NMT++VR+ LC VMVFAVVE+A
Sbjct: 100 PLMSRDIVRDCLEKDPIDRTDDDIEQLLEFMHQLPAFANMTMSVRRELCAVMVFAVVERA 159
Query: 90 GTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCD 149
GTIV+NDGEELDSWSV++NG VEV DG++++L +G+SFG+ PTM+K Y +GVMRT+ D
Sbjct: 160 GTIVLNDGEELDSWSVILNGSVEVTYPDGKAEILCMGNSFGVSPTMDKEYMKGVMRTKVD 219
Query: 150 DCQFVCITQTDYYRIQHQ 167
DCQFVCI Q DY RI +Q
Sbjct: 220 DCQFVCIAQQDYCRILNQ 237
>sp|Q8TEU7|RPGF6_HUMAN Rap guanine nucleotide exchange factor 6 OS=Homo sapiens GN=RAPGEF6
PE=1 SV=2
Length = 1601
Score = 183 bits (465), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 78/131 (59%), Positives = 105/131 (80%)
Query: 34 KDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIV 93
+D VRECLEK+P+++TDDDIEQLL+F L AF NMT++VR+ LC VM+F VVE+AG I+
Sbjct: 249 RDLVRECLEKEPADKTDDDIEQLLEFMHQLPAFANMTMSVRRELCSVMIFEVVEQAGAII 308
Query: 94 MNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQF 153
+ DG+ELDSW V++NG VE+ DG+ + L +G+SFGI PT++K Y G++RT+ DDCQF
Sbjct: 309 LEDGQELDSWYVILNGTVEISHPDGKVENLFMGNSFGITPTLDKQYMHGIVRTKVDDCQF 368
Query: 154 VCITQTDYYRI 164
VCI Q DY+RI
Sbjct: 369 VCIAQQDYWRI 379
>sp|Q9EQZ6|RPGF4_MOUSE Rap guanine nucleotide exchange factor 4 OS=Mus musculus GN=Rapgef4
PE=1 SV=1
Length = 1011
Score = 84.0 bits (206), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 37 VRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMND 96
+R L K P +RT DD+E + D H+KA ++++ V++ L GV++F K GT++ N
Sbjct: 328 MRMILRKPPGQRTVDDLEIIYDELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQ 387
Query: 97 GEELDSWSVVINGCVEVEL-SDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVC 155
GEE SW +++ G V V + G L GD FG L + + R D+C F+
Sbjct: 388 GEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLR 447
Query: 156 ITQTDYYRI 164
+ + D+ RI
Sbjct: 448 VDKEDFNRI 456
Score = 41.2 bits (95), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 40 CLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEE 99
CL+K P ER+ +D++ + + +KAF + + +C + +EK G + G+
Sbjct: 18 CLDKRPLERSSEDVDIIFTRLKGVKAFEKFHPNLLRQICLCGYYENLEK-GITLFRQGDI 76
Query: 100 LDSWSVVINGCVEVELSDGRSQM-------LQVGDSFG 130
+W V+ G ++V++S+ S L +G +FG
Sbjct: 77 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 114
>sp|Q8WZA2|RPGF4_HUMAN Rap guanine nucleotide exchange factor 4 OS=Homo sapiens GN=RAPGEF4
PE=1 SV=1
Length = 1011
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 1/129 (0%)
Query: 37 VRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMND 96
+R L K P +RT DD+E + + H+KA ++++ V++ L GV++F K GT++ N
Sbjct: 328 MRMILRKPPGQRTVDDLEIIYEELLHIKALSHLSTTVKRELAGVLIFESHAKGGTVLFNQ 387
Query: 97 GEELDSWSVVINGCVEVEL-SDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVC 155
GEE SW +++ G V V + G L GD FG L + + R D+C F+
Sbjct: 388 GEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLR 447
Query: 156 ITQTDYYRI 164
+ + D+ RI
Sbjct: 448 VDKEDFNRI 456
Score = 40.8 bits (94), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 48/98 (48%), Gaps = 8/98 (8%)
Query: 40 CLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEE 99
CL+K P ER+ +D++ + + +KAF + +C + +EK G + G+
Sbjct: 18 CLDKRPLERSSEDVDIIFTRLKEVKAFEKFHPNLLHQICLCGYYENLEK-GITLFRQGDI 76
Query: 100 LDSWSVVINGCVEVELSDGRSQM-------LQVGDSFG 130
+W V+ G ++V++S+ S L +G +FG
Sbjct: 77 GTNWYAVLAGSLDVKVSETSSHQDAVTICTLGIGTAFG 114
>sp|O95398|RPGF3_HUMAN Rap guanine nucleotide exchange factor 3 OS=Homo sapiens GN=RAPGEF3
PE=1 SV=6
Length = 923
Score = 71.6 bits (174), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/125 (29%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 41 LEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEEL 100
L K P +RTD++++ + + H+KA +++ +V++ L V++F KAGT++ + G++
Sbjct: 221 LRKPPGQRTDEELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKG 280
Query: 101 DSWSVVINGCVE-VELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQT 159
SW ++ G V V G L GD FG L + + R D+C F+ + +
Sbjct: 281 TSWYIIWKGSVNVVTHGKGLVTTLHEGDDFGQLALVNDAPRAATIILREDNCHFLRVDKQ 340
Query: 160 DYYRI 164
D+ RI
Sbjct: 341 DFNRI 345
>sp|Q9Z1C8|RPGF3_RAT Rap guanine nucleotide exchange factor 3 OS=Rattus norvegicus
GN=Rapgef3 PE=2 SV=2
Length = 926
Score = 70.5 bits (171), Expect = 5e-12, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 41 LEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEEL 100
L K P +RTD++++ + + H+KA +++ +V++ L V++F KAGT++ + G++
Sbjct: 221 LRKSPGQRTDEELDLIFEELVHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKG 280
Query: 101 DSWSVVINGCVE-VELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQT 159
SW ++ G V V G L GD FG L + + R ++C F+ + +
Sbjct: 281 TSWYIIWKGSVNVVTRGKGLVTTLHEGDDFGQLALVNDAPRAATIILRENNCHFLRVDKQ 340
Query: 160 DYYRI 164
D+ RI
Sbjct: 341 DFNRI 345
>sp|Q8VCC8|RPGF3_MOUSE Rap guanine nucleotide exchange factor 3 OS=Mus musculus GN=Rapgef3
PE=2 SV=2
Length = 918
Score = 69.7 bits (169), Expect = 9e-12, Method: Composition-based stats.
Identities = 36/125 (28%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 41 LEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEEL 100
L K P +RTD++++ + + H+KA +++ +V++ L V++F KAGT++ + G++
Sbjct: 221 LRKPPGQRTDEELDLIFEELLHIKAVAHLSNSVKRELAAVLLFEPHSKAGTVLFSQGDKG 280
Query: 101 DSWSVVINGCVE-VELSDGRSQMLQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQT 159
SW ++ G V V G L GD FG L + + R ++C F+ + +
Sbjct: 281 TSWYIIWKGSVNVVTHGKGLVTTLHEGDDFGQLALVNDAPRAATIILRENNCHFLRVDKQ 340
Query: 160 DYYRI 164
D+ RI
Sbjct: 341 DFNRI 345
>sp|P34578|RPGF1_CAEEL Rap guanine nucleotide exchange factor 1 OS=Caenorhabditis elegans
GN=epac-1 PE=4 SV=3
Length = 1038
Score = 50.8 bits (120), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/105 (27%), Positives = 52/105 (49%)
Query: 63 LKAFTNMTLAVRKALCGVMVFAVVEKAGTIVMNDGEELDSWSVVINGCVEVELSDGRSQM 122
+KA ++++ V++ L + AG++V GE W +V+ G VEV ++ +
Sbjct: 373 IKALSHLSTMVKRQLSNFVKVEQYVHAGSVVFRQGEIGVYWYIVLKGAVEVNVNGKIVCL 432
Query: 123 LQVGDSFGILPTMEKLYHEGVMRTRCDDCQFVCITQTDYYRIQHQ 167
L+ GD FG L + L + T DD F+ + + + +I HQ
Sbjct: 433 LREGDDFGKLALVNDLPRAATIVTYEDDSMFLVVDKHHFNQILHQ 477
>sp|Q96M20|CNBD2_HUMAN Cyclic nucleotide-binding domain-containing protein 2 OS=Homo
sapiens GN=CNBD2 PE=2 SV=2
Length = 576
Score = 39.3 bits (90), Expect = 0.012, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 67/139 (48%), Gaps = 22/139 (15%)
Query: 39 ECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAG--TIVMND 96
+ ++K PS RT+D+I+ + + Q L ++ N ++ L VM F E+ G +++
Sbjct: 90 QIMQKKPSWRTEDEIQAVCNILQVLDSYRNYAEPLQLLLAKVMRF---ERFGRRRVIIKK 146
Query: 97 GEELDSWSVVINGCVEV-ELSDGRS-------QMLQVGDSFGILPTMEKLYHEGVMRTRC 148
G++ +S+ + G V + + DG S ++L G FG + + H V R+
Sbjct: 147 GQKGNSFYFIYLGTVAITKDEDGSSAFLDPHPKLLHKGSCFGEMDVL----HASVRRS-- 200
Query: 149 DDCQFVCITQTDYYRIQHQ 167
VC+ +T++ + +
Sbjct: 201 ---TIVCMEETEFLVVDRE 216
>sp|Q95JR6|CNBD2_MACFA Cyclic nucleotide-binding domain-containing protein 2 OS=Macaca
fascicularis GN=CNBD2 PE=2 SV=1
Length = 585
Score = 38.5 bits (88), Expect = 0.020, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 66/139 (47%), Gaps = 22/139 (15%)
Query: 39 ECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVMVFAVVEKAG--TIVMND 96
+ ++K PS RT+D+I+ + + Q L ++ N ++ L VM F E+ G +++
Sbjct: 90 QIMQKKPSWRTEDEIQTVCNILQVLDSYRNYAEPLQLLLAKVMRF---ERFGRRRVIIKK 146
Query: 97 GEELDSWSVVINGCVEV-ELSDGRS-------QMLQVGDSFGILPTMEKLYHEGVMRTRC 148
G++ +S+ + G V + DG S ++LQ G FG + H + R+
Sbjct: 147 GQKGNSFYFIYLGTVAITNDEDGSSAFLDPHPKLLQKGSCFG----ETDIQHASLRRS-- 200
Query: 149 DDCQFVCITQTDYYRIQHQ 167
VC+ +T++ + +
Sbjct: 201 ---TIVCMEETEFLVVDRE 216
>sp|Q4P7H2|CWC27_USTMA Peptidyl-prolyl isomerase CWC27 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=CWC27 PE=3 SV=1
Length = 485
Score = 32.7 bits (73), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 3/82 (3%)
Query: 23 VSSSLFQSLIVKDRVRECLEKDPS-ERTDDDIEQLLDFTQHLKAFTNMTLAVRKALCGVM 81
SSS + + R + PS + DD LL F L+ + T + K L V
Sbjct: 320 ASSSTGRDFLASQRAKYLSSSHPSTAKQDDSYSALLSFQSRLRTRPSSTTPIAKPLPSVG 379
Query: 82 VFAVVEKAGTIVMNDGEELDSW 103
V V E+AG +D + D W
Sbjct: 380 VDEVEEEAGEYGASDDD--DDW 399
>sp|Q8DIC3|LNT_THEEB Apolipoprotein N-acyltransferase OS=Thermosynechococcus elongatus
(strain BP-1) GN=lnt PE=3 SV=1
Length = 506
Score = 32.7 bits (73), Expect = 1.2, Method: Composition-based stats.
Identities = 16/42 (38%), Positives = 25/42 (59%)
Query: 104 SVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHEGVMR 145
++ +NG + V + R + L+VG G +PT EKL EG+ R
Sbjct: 214 AIALNGVLSVRVMADRGEPLRVGLIQGNIPTREKLTPEGIRR 255
>sp|A0K8N3|PYRG_BURCH CTP synthase OS=Burkholderia cenocepacia (strain HI2424) GN=pyrG
PE=3 SV=1
Length = 552
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q1BHS2|PYRG_BURCA CTP synthase OS=Burkholderia cenocepacia (strain AU 1054) GN=pyrG
PE=3 SV=1
Length = 552
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|B4EDA3|PYRG_BURCJ CTP synthase OS=Burkholderia cepacia (strain J2315 / LMG 16656)
GN=pyrG PE=3 SV=1
Length = 552
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|B1JUY8|PYRG_BURCC CTP synthase OS=Burkholderia cenocepacia (strain MC0-3) GN=pyrG
PE=3 SV=1
Length = 552
Score = 32.0 bits (71), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|P31319|KAPR_APLCA cAMP-dependent protein kinase regulatory subunit OS=Aplysia
californica PE=2 SV=2
Length = 378
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 40/83 (48%), Gaps = 1/83 (1%)
Query: 82 VFAVVEKAGTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHE 141
+F V AG +++ G+E D++ V+ G V+V +++ + G SFG L +
Sbjct: 150 MFPVHRHAGEVIIQQGDEGDNFYVIDQGEVDVYVNNVHVTSIGEGGSFGELALIYGTPRA 209
Query: 142 GVMRTRCDDCQFVCITQTDYYRI 164
++ + D + I + Y RI
Sbjct: 210 ATVKAKT-DVKLWGIDRDSYRRI 231
>sp|P30625|KAPR_CAEEL cAMP-dependent protein kinase regulatory subunit OS=Caenorhabditis
elegans GN=kin-2 PE=2 SV=3
Length = 366
Score = 31.2 bits (69), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/83 (26%), Positives = 38/83 (45%), Gaps = 1/83 (1%)
Query: 82 VFAVVEKAGTIVMNDGEELDSWSVVINGCVEVELSDGRSQMLQVGDSFGILPTMEKLYHE 141
+F V + AG ++ GEE D++ V+ G V+V ++ + G SFG L +
Sbjct: 138 MFPVEKSAGETIIEQGEEGDNFYVIDKGTVDVYVNHEYVLTINEGGSFGELALIYGTPRA 197
Query: 142 GVMRTRCDDCQFVCITQTDYYRI 164
+ + D + I + Y RI
Sbjct: 198 ATVIAKT-DVKLWAIDRLTYRRI 219
>sp|B2JIX2|PYRG_BURP8 CTP synthase OS=Burkholderia phymatum (strain DSM 17167 / STM815)
GN=pyrG PE=3 SV=1
Length = 553
Score = 30.8 bits (68), Expect = 4.4, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFVERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEVGGTV 149
>sp|B2SXV1|PYRG_BURPP CTP synthase OS=Burkholderia phytofirmans (strain DSM 17436 / PsJN)
GN=pyrG PE=3 SV=1
Length = 557
Score = 30.4 bits (67), Expect = 4.7, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEVGGTV 149
>sp|Q13X05|PYRG_BURXL CTP synthase OS=Burkholderia xenovorans (strain LB400) GN=pyrG PE=3
SV=1
Length = 557
Score = 30.4 bits (67), Expect = 4.8, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEVGGTV 149
>sp|Q2SXC7|PYRG_BURTA CTP synthase OS=Burkholderia thailandensis (strain E264 / ATCC
700388 / DSM 13276 / CIP 106301) GN=pyrG PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q63SP8|PYRG_BURPS CTP synthase OS=Burkholderia pseudomallei (strain K96243) GN=pyrG
PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q3JQQ4|PYRG_BURP1 CTP synthase OS=Burkholderia pseudomallei (strain 1710b) GN=pyrG
PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|A1V5K4|PYRG_BURMS CTP synthase OS=Burkholderia mallei (strain SAVP1) GN=pyrG PE=3
SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q62J08|PYRG_BURMA CTP synthase OS=Burkholderia mallei (strain ATCC 23344) GN=pyrG
PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|A2SAU5|PYRG_BURM9 CTP synthase OS=Burkholderia mallei (strain NCTC 10229) GN=pyrG
PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|A3ML79|PYRG_BURM7 CTP synthase OS=Burkholderia mallei (strain NCTC 10247) GN=pyrG
PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 4.9, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|A4JFY7|PYRG_BURVG CTP synthase OS=Burkholderia vietnamiensis (strain G4 / LMG 22486)
GN=pyrG PE=3 SV=1
Length = 552
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q39EV7|PYRG_BURS3 CTP synthase OS=Burkholderia sp. (strain 383) GN=pyrG PE=3 SV=1
Length = 550
Score = 30.4 bits (67), Expect = 5.2, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|B1YT11|PYRG_BURA4 CTP synthase OS=Burkholderia ambifaria (strain MC40-6) GN=pyrG PE=3
SV=1
Length = 552
Score = 30.4 bits (67), Expect = 5.6, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|A9AGW0|PYRG_BURM1 CTP synthase OS=Burkholderia multivorans (strain ATCC 17616 / 249)
GN=pyrG PE=3 SV=1
Length = 553
Score = 30.4 bits (67), Expect = 5.7, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q0BDS1|PYRG_BURCM CTP synthase OS=Burkholderia ambifaria (strain ATCC BAA-244 / AMMD)
GN=pyrG PE=3 SV=1
Length = 552
Score = 30.4 bits (67), Expect = 5.8, Method: Composition-based stats.
Identities = 21/80 (26%), Positives = 39/80 (48%), Gaps = 10/80 (12%)
Query: 13 SSNLVQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQHLKAFTNMTLA 72
S+ + ++N F + +++S+I K+R + L K ++ + T ++AF A
Sbjct: 80 STKMRKANNFTTGQIYESVIRKERRGDYLGK--------TVQVIPHITNEIQAFIERGAA 131
Query: 73 VRKALCGVMVFAVVEKAGTI 92
A CG A+VE GT+
Sbjct: 132 --SATCGEPDVAIVEIGGTV 149
>sp|Q5RDS0|PLPL6_PONAB Neuropathy target esterase OS=Pongo abelii GN=PNPLA6 PE=2 SV=1
Length = 1365
Score = 30.0 bits (66), Expect = 7.7, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 88 KAGTIVMNDGEELDSWSVVINGCVEV------ELSDGRSQMLQVGDSFGILPTMEKLYHE 141
KAGTI+ G++ S V+ GC+ V + D + Q G+ G L +
Sbjct: 525 KAGTIIARQGDQDVSLHFVLWGCLHVYQHMIDKAEDVCLFVAQPGELVGQLAVLTGEPLI 584
Query: 142 GVMRTRCDDCQFVCITQTDYYRI 164
+R + DC F+ I+++D+Y I
Sbjct: 585 FTLRAQ-RDCTFLRISKSDFYEI 606
>sp|Q8IY17|PLPL6_HUMAN Neuropathy target esterase OS=Homo sapiens GN=PNPLA6 PE=1 SV=2
Length = 1366
Score = 30.0 bits (66), Expect = 7.7, Method: Composition-based stats.
Identities = 24/83 (28%), Positives = 40/83 (48%), Gaps = 7/83 (8%)
Query: 88 KAGTIVMNDGEELDSWSVVINGCVEV------ELSDGRSQMLQVGDSFGILPTMEKLYHE 141
KAGTI+ G++ S V+ GC+ V + D + Q G+ G L +
Sbjct: 525 KAGTIIARQGDQDVSLHFVLWGCLHVYQRMIDKAEDVCLFVAQPGELVGQLAVLTGEPLI 584
Query: 142 GVMRTRCDDCQFVCITQTDYYRI 164
+R + DC F+ I+++D+Y I
Sbjct: 585 FTLRAQ-RDCTFLRISKSDFYEI 606
>sp|A0Q8A2|CCA_FRATN CCA-adding enzyme OS=Francisella tularensis subsp. novicida (strain
U112) GN=cca PE=3 SV=1
Length = 369
Score = 29.6 bits (65), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 21/96 (21%), Positives = 46/96 (47%), Gaps = 8/96 (8%)
Query: 4 GVNIVFDDASSNL--VQSNGFVSSSLFQSLIVKDRVRECLEKDPSERTDDDIEQLLDFTQ 61
+ I+F + S L + + F + +++ + +++ CL K P ++ DD ++LL +
Sbjct: 200 ALKIIFPNISCILLLIPNKSFFENPIYKDSNINEKITLCLLKVPQQKLDDIRKELLLTNK 259
Query: 62 HLKAFTNMTLAVRKAL-----CGVMVFAVVEKAGTI 92
H K ++A+ K L +F +++ A I
Sbjct: 260 HYKLL-KASIAISKILEDRNITAEEIFQLIKNANII 294
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.397
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 59,154,954
Number of Sequences: 539616
Number of extensions: 2216940
Number of successful extensions: 6087
Number of sequences better than 100.0: 44
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 25
Number of HSP's that attempted gapping in prelim test: 6056
Number of HSP's gapped (non-prelim): 49
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)