Query psy7151
Match_columns 188
No_of_seqs 246 out of 2220
Neff 5.6
Searched_HMMs 29240
Date Fri Aug 16 19:30:43 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7151.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7151hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1gpm_A GMP synthetase, XMP ami 99.9 4.4E-26 1.5E-30 210.9 8.9 117 37-158 139-263 (525)
2 3tqi_A GMP synthase [glutamine 99.9 3.8E-26 1.3E-30 211.5 8.1 114 37-155 142-263 (527)
3 2ywb_A GMP synthase [glutamine 99.9 1.2E-25 4.1E-30 206.8 7.5 134 18-157 87-243 (503)
4 2vxo_A GMP synthase [glutamine 99.9 2.1E-25 7E-30 213.0 8.3 137 18-159 117-278 (697)
5 3uow_A GMP synthetase; structu 99.9 3.7E-25 1.3E-29 206.3 5.2 118 34-157 164-290 (556)
6 2vpi_A GMP synthase; guanine m 99.5 5.9E-15 2E-19 122.2 4.8 86 18-105 112-218 (218)
7 2a9v_A GMP synthase; structura 99.3 4.8E-13 1.6E-17 109.9 2.1 69 37-108 137-210 (212)
8 1i1q_B Anthranilate synthase c 99.3 2E-12 6.9E-17 103.9 5.5 78 17-96 91-189 (192)
9 1qdl_B Protein (anthranilate s 99.1 2.3E-11 7.9E-16 98.1 4.5 75 18-94 93-193 (195)
10 1wl8_A GMP synthase [glutamine 99.1 4.8E-11 1.6E-15 95.4 5.9 77 17-95 87-185 (189)
11 4gud_A Imidazole glycerol phos 99.1 7.5E-11 2.6E-15 95.4 3.7 31 66-98 175-205 (211)
12 3r75_A Anthranilate/para-amino 99.0 9.2E-11 3.2E-15 111.3 4.7 85 16-104 535-641 (645)
13 3fij_A LIN1909 protein; 11172J 98.9 7.8E-10 2.7E-14 93.0 5.5 62 34-97 171-241 (254)
14 2v4u_A CTP synthase 2; pyrimid 98.8 1.1E-09 3.9E-14 94.0 3.3 71 32-104 196-282 (289)
15 3d54_D Phosphoribosylformylgly 98.8 1.9E-09 6.6E-14 86.7 3.8 38 59-96 169-211 (213)
16 3q4g_A NH(3)-dependent NAD(+) 98.8 1.1E-09 3.7E-14 94.4 0.9 69 90-158 5-86 (279)
17 2w7t_A CTP synthetase, putativ 98.8 3.9E-09 1.3E-13 89.9 4.3 71 34-106 174-264 (273)
18 1a9x_B Carbamoyl phosphate syn 98.7 6.7E-09 2.3E-13 93.0 3.3 79 16-96 275-373 (379)
19 1gpw_B Amidotransferase HISH; 98.6 2.1E-08 7.3E-13 80.5 4.5 56 35-96 135-197 (201)
20 1wxi_A NH(3)-dependent NAD(+) 98.6 6.3E-09 2.2E-13 89.1 0.8 62 97-158 11-86 (275)
21 2ywj_A Glutamine amidotransfer 98.6 4.8E-08 1.6E-12 77.5 5.0 55 36-96 124-183 (186)
22 1kqp_A NAD+ synthase, NH(3)-de 98.5 9.6E-08 3.3E-12 81.3 4.5 58 97-157 10-81 (271)
23 1l9x_A Gamma-glutamyl hydrolas 98.5 4.6E-08 1.6E-12 84.9 2.4 62 40-103 191-283 (315)
24 3dpi_A NAD+ synthetase; ssgcid 98.4 1E-07 3.6E-12 82.4 2.8 70 90-159 11-91 (285)
25 3nva_A CTP synthase; rossman f 98.4 5.8E-08 2E-12 90.4 0.9 58 36-97 469-533 (535)
26 3fiu_A NH(3)-dependent NAD(+) 98.3 2.5E-07 8.6E-12 77.9 3.2 57 101-158 5-64 (249)
27 1s1m_A CTP synthase; CTP synth 98.2 1.6E-07 5.4E-12 87.7 0.5 38 59-96 497-536 (545)
28 3m3p_A Glutamine amido transfe 98.2 2.9E-07 1E-11 77.7 2.0 76 17-97 97-196 (250)
29 3l7n_A Putative uncharacterize 98.1 9.1E-07 3.1E-11 73.2 2.8 74 16-96 98-194 (236)
30 1ka9_H Imidazole glycerol phos 98.1 7.2E-07 2.4E-11 71.6 1.7 34 60-95 163-199 (200)
31 1o1y_A Conserved hypothetical 98.1 1.4E-06 4.8E-11 72.4 3.2 30 59-95 170-199 (239)
32 2dpl_A GMP synthetase, GMP syn 98.0 2.2E-06 7.6E-11 74.1 2.9 51 103-156 1-54 (308)
33 2nv0_A Glutamine amidotransfer 98.0 5.2E-06 1.8E-10 66.1 4.7 56 34-96 128-187 (196)
34 1vco_A CTP synthetase; tetrame 98.0 1.7E-06 5.8E-11 80.9 2.0 39 59-97 504-544 (550)
35 2e18_A NH(3)-dependent NAD(+) 98.0 4.6E-06 1.6E-10 69.7 4.1 55 101-159 2-60 (257)
36 3p52_A NH(3)-dependent NAD(+) 98.0 2.4E-06 8.2E-11 72.0 2.4 56 103-158 4-62 (249)
37 1jvn_A Glutamine, bifunctional 97.9 4.5E-06 1.5E-10 77.6 3.8 34 60-96 182-215 (555)
38 1xng_A NH(3)-dependent NAD(+) 97.9 1.9E-06 6.7E-11 72.5 0.6 54 102-158 2-61 (268)
39 2ywd_A Glutamine amidotransfer 97.9 1.3E-05 4.5E-10 63.2 4.8 44 47-95 141-188 (191)
40 1q7r_A Predicted amidotransfer 97.9 8E-06 2.7E-10 66.6 3.6 50 40-96 156-209 (219)
41 2iss_D Glutamine amidotransfer 97.8 1.5E-05 5E-10 64.5 4.5 52 37-95 151-206 (208)
42 3n05_A NH(3)-dependent NAD(+) 97.7 6.8E-06 2.3E-10 76.6 1.5 55 105-159 306-364 (590)
43 4f4h_A Glutamine dependent NAD 97.5 1.8E-05 6E-10 73.8 1.1 53 107-159 282-338 (565)
44 2abw_A PDX2 protein, glutamina 97.2 0.00014 4.7E-09 59.3 3.0 32 60-96 182-213 (227)
45 3uow_A GMP synthetase; structu 96.8 0.00012 4.1E-09 68.1 -1.1 89 10-161 361-449 (556)
46 3ilv_A Glutamine-dependent NAD 96.8 0.0002 6.8E-09 67.5 -0.0 36 106-144 284-322 (634)
47 3sdb_A Glutamine-dependent NAD 96.8 0.00033 1.1E-08 66.6 1.5 52 107-158 343-403 (680)
48 2vxo_A GMP synthase [glutamine 96.5 0.00012 4E-09 70.1 -3.6 122 4-184 359-480 (697)
49 1wy5_A TILS, hypothetical UPF0 94.2 0.058 2E-06 46.0 5.4 35 105-142 4-41 (317)
50 1jgt_A Beta-lactam synthetase; 92.3 0.037 1.3E-06 50.7 1.2 34 107-143 221-259 (513)
51 1sur_A PAPS reductase; assimil 91.7 0.14 4.9E-06 40.8 3.8 18 123-143 45-62 (215)
52 1q15_A CARA; CMPR, (2S,5S)-5-c 91.5 0.063 2.2E-06 49.0 1.8 28 115-145 230-258 (503)
53 3bl5_A Queuosine biosynthesis 91.5 0.046 1.6E-06 43.2 0.7 32 123-157 4-37 (219)
54 2der_A TRNA-specific 2-thiouri 91.5 0.059 2E-06 47.7 1.4 31 123-156 18-50 (380)
55 2pg3_A Queuosine biosynthesis 89.7 0.083 2.8E-06 42.6 0.7 33 123-158 3-37 (232)
56 2hma_A Probable tRNA (5-methyl 89.3 0.066 2.3E-06 47.2 -0.2 33 123-158 10-44 (376)
57 3k32_A Uncharacterized protein 87.3 0.12 4.1E-06 41.3 0.2 18 124-144 8-25 (203)
58 2c5s_A THII, probable thiamine 87.0 0.14 4.7E-06 45.6 0.4 16 130-145 192-207 (413)
59 2o8v_A Phosphoadenosine phosph 86.4 0.44 1.5E-05 39.3 3.2 28 111-142 35-62 (252)
60 1gpm_A GMP synthetase, XMP ami 86.3 0.088 3E-06 48.3 -1.3 44 131-174 388-431 (525)
61 1ct9_A Asparagine synthetase B 86.1 0.38 1.3E-05 44.4 2.8 33 107-142 210-243 (553)
62 1vl2_A Argininosuccinate synth 85.4 0.17 5.9E-06 45.7 0.1 32 122-156 14-47 (421)
63 1ni5_A Putative cell cycle pro 84.2 0.4 1.4E-05 42.8 2.0 26 115-143 5-31 (433)
64 2ywb_A GMP synthase [glutamine 84.2 0.16 5.5E-06 46.2 -0.6 43 131-173 366-408 (503)
65 3tqi_A GMP synthase [glutamine 83.8 0.12 4.2E-06 47.4 -1.6 30 131-160 390-419 (527)
66 3a2k_A TRNA(Ile)-lysidine synt 83.5 0.5 1.7E-05 42.5 2.4 29 112-143 5-36 (464)
67 2vdj_A Homoserine O-succinyltr 82.4 0.42 1.4E-05 41.2 1.3 23 59-81 218-240 (301)
68 2h2w_A Homoserine O-succinyltr 81.8 0.48 1.6E-05 41.1 1.5 23 59-81 229-251 (312)
69 2oq2_A Phosphoadenosine phosph 79.4 1.2 4.1E-05 36.8 3.1 27 111-142 32-58 (261)
70 1k92_A Argininosuccinate synth 78.1 0.58 2E-05 42.7 0.8 20 123-145 11-30 (455)
71 3rjz_A N-type ATP pyrophosphat 77.3 0.53 1.8E-05 39.3 0.3 18 124-144 6-23 (237)
72 1kor_A Argininosuccinate synth 76.8 0.61 2.1E-05 41.5 0.6 29 129-157 4-35 (400)
73 2nz2_A Argininosuccinate synth 76.7 0.57 1.9E-05 41.9 0.3 32 123-157 6-39 (413)
74 1zun_A Sulfate adenylyltransfe 76.5 1.2 4E-05 38.4 2.3 33 107-142 30-63 (325)
75 2wsi_A FAD synthetase; transfe 71.0 1.1 3.9E-05 38.1 0.8 17 123-142 54-70 (306)
76 2dpl_A GMP synthetase, GMP syn 67.8 1.4 4.9E-05 37.4 0.8 27 131-157 173-199 (308)
77 1vbk_A Hypothetical protein PH 54.8 3.2 0.00011 35.4 0.6 14 130-144 184-197 (307)
78 2goy_A Adenosine phosphosulfat 52.4 11 0.00038 31.1 3.6 27 111-142 44-70 (275)
79 3s6o_A Polysaccharide deacetyl 49.3 30 0.001 29.2 5.8 51 69-121 260-310 (321)
80 3qbu_A Putative uncharacterize 46.9 26 0.00088 29.5 5.1 52 68-121 272-323 (326)
81 2lyd_A Decapping protein 1; DC 42.2 22 0.00074 27.0 3.4 66 11-80 52-119 (134)
82 2nx2_A Hypothetical protein YP 34.6 67 0.0023 25.0 5.4 62 113-175 33-101 (181)
83 2btq_B Tubulin btubb; structur 32.2 21 0.00072 31.8 2.2 59 70-140 81-148 (426)
84 3rxz_A Polysaccharide deacetyl 30.8 49 0.0017 27.2 4.2 50 68-119 234-283 (300)
85 1tzy_B Histone H2B; histone-fo 27.2 25 0.00085 26.7 1.6 23 74-96 48-70 (126)
86 2nqb_D Histone H2B; nucleosome 27.2 25 0.00086 26.5 1.6 24 74-97 45-68 (123)
87 2qkl_A DCP1 protein, SPBC3B9.2 26.7 67 0.0023 24.0 3.9 64 12-80 48-113 (127)
88 3maj_A DNA processing chain A; 25.6 36 0.0012 30.1 2.5 50 79-154 136-185 (382)
89 3oow_A Phosphoribosylaminoimid 25.3 74 0.0025 25.1 4.0 43 110-154 47-90 (166)
90 3rg8_A Phosphoribosylaminoimid 23.4 68 0.0023 25.1 3.5 42 110-153 44-87 (159)
91 3kuu_A Phosphoribosylaminoimid 23.3 83 0.0028 25.0 4.0 45 110-156 54-99 (174)
92 3trh_A Phosphoribosylaminoimid 23.2 78 0.0027 25.0 3.8 44 110-155 48-92 (169)
93 3ors_A N5-carboxyaminoimidazol 22.2 92 0.0031 24.4 4.0 44 110-155 45-89 (163)
94 3fwk_A FMN adenylyltransferase 21.3 27 0.00094 30.0 0.9 25 115-142 46-75 (308)
95 4a3u_A NCR, NADH\:flavin oxido 21.1 84 0.0029 26.9 4.0 31 107-137 203-236 (358)
96 3fsg_A Alpha/beta superfamily 20.9 49 0.0017 24.4 2.2 53 103-157 69-121 (272)
97 1o4v_A Phosphoribosylaminoimid 20.7 1E+02 0.0034 24.7 4.0 45 110-156 55-100 (183)
98 4grd_A N5-CAIR mutase, phospho 20.5 1.2E+02 0.004 24.1 4.3 46 109-156 53-99 (173)
No 1
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=99.93 E-value=4.4e-26 Score=210.89 Aligned_cols=117 Identities=28% Similarity=0.447 Sum_probs=97.5
Q ss_pred EEeeeccccccccccccceecc-----cccccccccccEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchHHHH
Q psy7151 37 IKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEE 111 (188)
Q Consensus 37 V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~ 111 (188)
++++|++. +..+|+++.+++ +++|+++.++++||+|||||+.+|+.|.+||+||+..+|+|+++|+|++++++
T Consensus 139 v~~~H~~~--V~~lp~g~~v~A~s~~~~i~ai~~~~~~i~gvQFHPE~~~~~~g~~ll~nF~~~i~~~~~~~~~~~~~~~ 216 (525)
T 1gpm_A 139 VWMSHGDK--VTAIPSDFITVASTESCPFAIMANEEKRFYGVQFHPEVTHTRQGMRMLERFVRDICQCEALWTPAKIIDD 216 (525)
T ss_dssp EEEEECSE--EEECCTTCEEEEECSSCSCSEEEETTTTEEEESBCTTSTTSTTHHHHHHHHHHTTSCCCCCCCHHHHHHH
T ss_pred EEEEccce--eeeCCCCCEEEEECCCCCEEEEEECCCCEEEEecCCCCCcchhHHHHHHHHHHhhhhccccchHHHHHHh
Confidence 44445554 455555555543 58899998889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCC---CCCceEEEEecC
Q psy7151 112 LIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPF---PGPGLAIRVICG 158 (188)
Q Consensus 112 iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~---p~~~L~v~~~~~ 158 (188)
++++||++++++++++ |+|||+||+|++.++. ..+..++.++..
T Consensus 217 ~~~~ir~~v~~~~vvv---alSGGvDSsv~a~ll~~a~G~~v~av~v~~g 263 (525)
T 1gpm_A 217 AVARIREQVGDDKVIL---GLSGGVDSSVTAMLLHRAIGKNLTCVFVDNG 263 (525)
T ss_dssp HHHHHHHHHTTCEEEE---ECCSSHHHHHHHHHHHHHHGGGEEEEEEECS
T ss_pred hhhhhhhhhcccceEE---EecCCCCHHHHHHHHHHHhCCCEEEEEEeCC
Confidence 9999999999998888 9999999999994332 246777877654
No 2
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=99.92 E-value=3.8e-26 Score=211.50 Aligned_cols=114 Identities=30% Similarity=0.471 Sum_probs=95.3
Q ss_pred EEeeeccccccccccccceecc-----cccccccccccEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchHHHH
Q psy7151 37 IKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEE 111 (188)
Q Consensus 37 V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~ 111 (188)
++++|++. +..+|+++.+++ +++|+++.++++||+|||||+.+|+.|.+||+||+..+|+|+++|+|++++++
T Consensus 142 v~~~H~d~--v~~lp~g~~v~A~s~~~~i~ai~~~~~~~~GvQFHPE~~~t~~G~~ll~nF~~~i~~~~~~w~~~~~~~~ 219 (527)
T 3tqi_A 142 VWMSHGDI--VSELPPGFEATACTDNSPLAAMADFKRRFFGLQFHPEVTHTPQGHRILAHFVIHICQCIPNWTTKHIIED 219 (527)
T ss_dssp EEEESSSC--BCSCCTTCEEEEEETTEEEEEEECSSSCEEEESBCSSSTTSTTHHHHHHHHHHTTSCCCCCCCSHHHHHH
T ss_pred EEEEcccc--hhccCCCCEEEEEeCCCcEEEEEcCCCCEEEEEeccccccccccchhhhhhhhhcccccchhhHHHHHHH
Confidence 44455555 556666655543 58899988889999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCC---CCCceEEEE
Q psy7151 112 LIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPF---PGPGLAIRV 155 (188)
Q Consensus 112 iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~---p~~~L~v~~ 155 (188)
.+++||++++++++++ |+|||+||+|++.++. ..+..++.+
T Consensus 220 ~i~~i~~~v~~~kvlv---alSGGvDSsvla~ll~~~~G~~v~av~v 263 (527)
T 3tqi_A 220 SIRDIQEKVGKEQVIV---GLSGGVDSAVTATLVHKAIGDQLVCVLV 263 (527)
T ss_dssp HHHHHHHHHTTSCEEE---ECTTTHHHHHHHHHHHHHHGGGEEEEEE
T ss_pred HHHHHHHhcCCCeEEE---EEecCcCHHHHHHHHHHHhCCeEEEEEe
Confidence 9999999999999988 9999999999994332 234455554
No 3
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=99.92 E-value=1.2e-25 Score=206.85 Aligned_cols=134 Identities=28% Similarity=0.380 Sum_probs=103.9
Q ss_pred ecCCeEEecCcccCCcce----------------eEEeeeccccccccccccceecc-----cccccccccccEEEEeec
Q psy7151 18 LRPDLIESASHLASNKAD----------------VIKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELRLYGLQFH 76 (188)
Q Consensus 18 ~~g~~I~~~~~~~HGk~~----------------~V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~i~GVQFH 76 (188)
++|+.+.+.+.+.+|... .++++|++. +..+|+++.+++ +++|+++.++++||+|||
T Consensus 87 ~~GG~v~~~~~~e~G~~~v~~~~~~l~~~~~~~~~v~~~H~~~--v~~lp~g~~v~A~s~~~~i~ai~~~~~~~~gvQFH 164 (503)
T 2ywb_A 87 ELGGRVERAGRAEYGKALLTRHEGPLFRGLEGEVQVWMSHQDA--VTAPPPGWRVVAETEENPVAAIASPDGRAYGVQFH 164 (503)
T ss_dssp TTTCEEECC---CEEEEECSEECSGGGTTCCSCCEEEEECSCE--EEECCTTCEEEEECSSCSCSEEECTTSSEEEESBC
T ss_pred HhCCeEeeCCCCccceEEEEecCcHHhhcCCCccEEEEECCCc--cccCCCCCEEEEEECCCCEEEEEeCCCCEEEEecC
Confidence 467777776656666433 344445554 455555555543 588999988899999999
Q ss_pred ccccCChhhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCC--CCCceEEE
Q psy7151 77 PEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPF--PGPGLAIR 154 (188)
Q Consensus 77 PE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~--p~~~L~v~ 154 (188)
||+.+|+.|.+||+||+ .+|+|+++|+|++++++++++||++++++++++ |+|||+||+|++.++. ..+..++.
T Consensus 165 PE~~~~~~g~~ll~~F~-~~~~~~~~~~~~~~~~~~i~~ir~~~~~~kvvv---alSGGvDSsvla~ll~~~g~~v~av~ 240 (503)
T 2ywb_A 165 PEVAHTPKGMQILENFL-ELAGVKRDWTPEHVLEELLREVRERAGKDRVLL---AVSGGVDSSTLALLLAKAGVDHLAVF 240 (503)
T ss_dssp TTSTTSTTHHHHHHHHH-HHTTCCCCCCHHHHHHHHHHHHHHHHTTSEEEE---EECSSHHHHHHHHHHHHHTCEEEEEE
T ss_pred CCcccccccHHHHHHHH-HHhhhhccccchhhhHHHHHhhhhhccCccEEE---EecCCcchHHHHHHHHHcCCeEEEEE
Confidence 99999999999999999 999999999999999999999999999989888 9999999999994332 24455666
Q ss_pred Eec
Q psy7151 155 VIC 157 (188)
Q Consensus 155 ~~~ 157 (188)
+..
T Consensus 241 vd~ 243 (503)
T 2ywb_A 241 VDH 243 (503)
T ss_dssp EEC
T ss_pred EeC
Confidence 553
No 4
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=99.91 E-value=2.1e-25 Score=213.04 Aligned_cols=137 Identities=33% Similarity=0.497 Sum_probs=104.7
Q ss_pred ecCCeEEecCcccCCccee-----------------EEeeeccccccccccccceecc----cccccccccccEEEEeec
Q psy7151 18 LRPDLIESASHLASNKADV-----------------IKTHHNDSPLIRALREQGKVIE----PLKDFHKDELRLYGLQFH 76 (188)
Q Consensus 18 ~~g~~I~~~~~~~HGk~~~-----------------V~s~H~~~~Lf~~lp~~s~vi~----pi~Ai~~~~~~i~GVQFH 76 (188)
++|+.+.+.+...||.... ++++|++. +..+|+++.+++ +++|+++.++++||+|||
T Consensus 117 ~lGG~v~~~~~~e~G~~~v~~~~~~~Lf~~l~~~~~v~~~H~~~--V~~lp~g~~vlA~s~~~i~ai~~~~~~i~GvQFH 194 (697)
T 2vxo_A 117 VFGGTVHKKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDS--VDKVADGFKVVARSGNIVAGIANESKKLYGAQFH 194 (697)
T ss_dssp HTTCCBCC-------CEEEEECTTSGGGTTCCSEEEECCCSSCC--BSSCCTTCEEEEEETTEEEEEEETTTTEEEESSC
T ss_pred HhCCeEeecCCCccceEEEEecCCChhhhcCCccCcceeecccc--eecCCCCeEEEEEeCCceEEEEeCCCCEEEEEec
Confidence 5788888777777775322 33333333 344444444433 478999988999999999
Q ss_pred ccccCChhhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhc----CCCCCceE
Q psy7151 77 PEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRH----PFPGPGLA 152 (188)
Q Consensus 77 PE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~----~~p~~~L~ 152 (188)
||+.+|+.|..||+||+..+|+|+++|+|++++++++++||++++++++++ |+|||+||+|+|.+ ..+.+..+
T Consensus 195 PE~~~t~~g~~ll~nFl~~i~~~~~~~~~~~~~~~~i~~Ir~~v~~~~vvv---~lSGGvDSsVla~Ll~~alG~~~V~a 271 (697)
T 2vxo_A 195 PEVGLTENGKVILKNFLYDIAGCSGTFTVQNRELECIREIKERVGTSKVLV---LLSGGVDSTVCTALLNRALNQEQVIA 271 (697)
T ss_dssp TTSSSSTTHHHHHHHHHTTTTCCCSCCCHHHHHHHHHHHHHHHHTTCEEEE---ECCSSHHHHHHHHHHHHHSCGGGEEE
T ss_pred ccCCCCccchhhhhhhhhccccccccchhhHHHHHHHHHHHHHhcccceEE---EccCchHHHHHHHHHHHhcCCceEEE
Confidence 999999999999999999999999999999999999999999999989888 99999999999933 23467889
Q ss_pred EEEecCC
Q psy7151 153 IRVICGE 159 (188)
Q Consensus 153 v~~~~~~ 159 (188)
+.|+...
T Consensus 272 V~vd~g~ 278 (697)
T 2vxo_A 272 VHIDNGF 278 (697)
T ss_dssp EEEECSC
T ss_pred EEecccc
Confidence 9988643
No 5
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=99.90 E-value=3.7e-25 Score=206.35 Aligned_cols=118 Identities=21% Similarity=0.354 Sum_probs=101.8
Q ss_pred ceeEEeeeccccccccccccceecc-----cccccccccccEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchH
Q psy7151 34 ADVIKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSR 108 (188)
Q Consensus 34 ~~~V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ 108 (188)
...++++|++. +..+|+++.+++ +++|+++.++++||+|||||+.+|+.|.+||+||+..+|+|+++|+|+++
T Consensus 164 ~~~v~~~H~d~--V~~lp~g~~vlA~s~~~~i~ai~~~~~~i~GvQFHPE~~~~~~G~~ll~nFl~~i~g~~~~~~~~~~ 241 (556)
T 3uow_A 164 ITTVWMNHNDE--VTKIPENFYLVSSSENCLICSIYNKEYNIYGVQYHPEVYESLDGELMFYNFAYNICKCKKQFDPIRY 241 (556)
T ss_dssp EEEEEEEEEEE--EEECCTTCEEEEEETTEEEEEEEETTTTEEEESSCTTSTTSTTHHHHHHHHHTTTTCCCC-CCHHHH
T ss_pred ceEEEEEccce--eeccCCCcEEEEEeCCCCEEEEEECCCCEEEEEcCCCCCccccchHHHHHHHHHhhccccccccccc
Confidence 45677778887 788888877664 58999998889999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhC-CCcEEEEeeccccCCChhhHhhcC---CCCCceEEEEec
Q psy7151 109 EEELIKYVKETVG-NMKVLVRKLGLDLGLTPEVVMRHP---FPGPGLAIRVIC 157 (188)
Q Consensus 109 ie~iI~~IRe~Vg-~~kVi~~~~GlSGGvDSavva~~~---~p~~~L~v~~~~ 157 (188)
+++.+++||++ + +++|++ |+||||||+|+|.++ +..+..++.+..
T Consensus 242 ~~~~i~~ir~~-g~~~~vvv---alSGGvDSsv~a~ll~~~~G~~v~~v~vd~ 290 (556)
T 3uow_A 242 HELELKNIEKY-KHDHYVIA---AMSGGIDSTVAAAYTHKIFKERFFGIFIDN 290 (556)
T ss_dssp HHHHHHHHGGG-TTTCEEEE---ECCSSHHHHHHHHHHHHHHGGGEEEEEEEC
T ss_pred cccceeeeeec-CCCceEEE---EcccCCCHHHHHHHHHHHhCCeEEEEEEec
Confidence 99999999999 8 778888 999999999999443 235677777764
No 6
>2vpi_A GMP synthase; guanine monophosphate synthetase, phosphoprotein, GMP synthetase, GMP biosynthesis, glutamine amidotransferase, ligase, cytoplasm; 2.40A {Homo sapiens}
Probab=99.52 E-value=5.9e-15 Score=122.22 Aligned_cols=86 Identities=34% Similarity=0.595 Sum_probs=63.3
Q ss_pred ecCCeEEecCcccCCcce-----------------eEEeeeccccccccccccceecc----cccccccccccEEEEeec
Q psy7151 18 LRPDLIESASHLASNKAD-----------------VIKTHHNDSPLIRALREQGKVIE----PLKDFHKDELRLYGLQFH 76 (188)
Q Consensus 18 ~~g~~I~~~~~~~HGk~~-----------------~V~s~H~~~~Lf~~lp~~s~vi~----pi~Ai~~~~~~i~GVQFH 76 (188)
++|+.+.+.+.+.+|... .++++|++. +..+|+++.+++ .++|+++.+.++||+|||
T Consensus 112 ~~GG~v~~~~~~~~G~~~v~~~~~~~l~~~l~~~~~v~~~H~~~--v~~l~~~~~vlA~s~~~i~ai~~~~~~i~gvQfH 189 (218)
T 2vpi_A 112 VFGGTVHKKSVREDGVFNISVDNTCSLFRGLQKEEVVLLTHGDS--VDKVADGFKVVARSGNIVAGIANESKKLYGAQFH 189 (218)
T ss_dssp HTTCCEEEEEECSCEEEEEEECTTSGGGTTCCSEEEEEECSEEE--ESSCCTTCEEEEEETTEEEEEEETTTTEEEESSC
T ss_pred HhCCceEeCCCCcccEEEEEEccCChhHhcCCCCcEEeehhhhH--hhhcCCCCEEEEEcCCeEEEEEECCCCEEEEEcC
Confidence 577777777665566422 233334444 444444444332 478898877899999999
Q ss_pred ccccCChhhHHHHHHHHHHhhCCCCCccc
Q psy7151 77 PEVDLTNEGRTMLKNFLFDVCGLTGNFTL 105 (188)
Q Consensus 77 PE~~~t~~G~~il~nFl~~i~~~~~~W~~ 105 (188)
||+..++.|.+||+||+..+|+|+++|+|
T Consensus 190 PE~~~~~~g~~l~~~F~~~~~~~~~~w~~ 218 (218)
T 2vpi_A 190 PEVGLTENGKVILKNFLYDIAGCSGTFTV 218 (218)
T ss_dssp TTSTTSTTHHHHHHHHHTTTTCCCCCCCC
T ss_pred CCCCCChhHHHHHHHHHHHHhCCCCCCCC
Confidence 99999999999999999889999999996
No 7
>2a9v_A GMP synthase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, ligase; 2.24A {Thermoplasma acidophilum} SCOP: c.23.16.1
Probab=99.30 E-value=4.8e-13 Score=109.87 Aligned_cols=69 Identities=28% Similarity=0.495 Sum_probs=50.6
Q ss_pred EEeeeccccccccccccceecc-----cccccccccccEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchH
Q psy7151 37 IKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSR 108 (188)
Q Consensus 37 V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ 108 (188)
+++.|++. ++.+|.+..+++ +++|+++.+.+++|+|||||+..++.|..||+||+. +|+....|++++|
T Consensus 137 v~~~H~~~--v~~l~~~~~vlA~s~d~~i~ai~~~~~~i~gvQfHPE~~~~~~g~~l~~~F~~-~~~~~~~~~~~~~ 210 (212)
T 2a9v_A 137 VWENHNDE--IINLPDDFTLAASSATCQVQGFYHKTRPIYATQFHPEVEHTQYGRDIFRNFIG-ICASYREIQKENF 210 (212)
T ss_dssp EEEEEEEE--EESCCTTEEEEEECSSCSCSEEEESSSSEEEESSCTTSTTSTTHHHHHHHHHH-HHHHHHHHHHC--
T ss_pred EEeEhhhh--HhhCCCCcEEEEEeCCCCEEEEEECCCCEEEEEeCCCCCCCccHHHHHHHHHH-HHHHhhhccHhhc
Confidence 44445444 445555544433 478999877799999999999999999999999998 5666677888776
No 8
>1i1q_B Anthranilate synthase component II; tryptophan biosynthesis, lyase; HET: TRP; 1.90A {Salmonella typhimurium} SCOP: c.23.16.1 PDB: 1i7q_B 1i7s_B*
Probab=99.29 E-value=2e-12 Score=103.94 Aligned_cols=78 Identities=24% Similarity=0.339 Sum_probs=54.3
Q ss_pred eecCCeEEecCcccCCcceeEEeeecccccccccc-------ccce----------ecc----cccccccccccEEEEee
Q psy7151 17 TLRPDLIESASHLASNKADVIKTHHNDSPLIRALR-------EQGK----------VIE----PLKDFHKDELRLYGLQF 75 (188)
Q Consensus 17 ~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~lp-------~~s~----------vi~----pi~Ai~~~~~~i~GVQF 75 (188)
.++|+.+.+.+.+.||++..+ .+.+..+|++++ +|+. +++ .++|+++.+.++||+||
T Consensus 91 ~~~Gg~v~~~~~~~~g~~~~~--~~~~~~l~~~~~~~~~v~~~H~~~v~~lp~~~~v~a~~~~~~~ai~~~~~~~~gvQf 168 (192)
T 1i1q_B 91 EAYGGYVGQAGEILHGKATSI--EHDGQAMFAGLANPLPVARYHSLVGSNVPAGLTINAHFNGMVMAVRHDADRVCGFQF 168 (192)
T ss_dssp HHTSCCCCC---CCSSEEEEE--EECCCGGGTTSCSSEEEEECCC---CCCCTTCEEEEEETTEEEEEEETTTTEEEESS
T ss_pred HHhCCEEEeCCCcEecceeEE--ecCCChHHhcCCCCcEEEechhhHhhhCCCccEEEECCCCcEEEEEECCCCEEEEEc
Confidence 356777776666778876655 344455666554 2322 221 26788887789999999
Q ss_pred cccccCChhhHHHHHHHHHHh
Q psy7151 76 HPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 76 HPE~~~t~~G~~il~nFl~~i 96 (188)
|||+.+++.|.+||+||+..+
T Consensus 169 HPE~~~~~~g~~il~nf~~~~ 189 (192)
T 1i1q_B 169 HPESILTTQGARLLEQTLAWA 189 (192)
T ss_dssp BTTSTTCTTHHHHHHHHHHHH
T ss_pred cCcccCCcccHHHHHHHHHHH
Confidence 999999999999999999764
No 9
>1qdl_B Protein (anthranilate synthase (TRPG-SUBUNIT)); tryptophan biosynthesis, glutamine amidotransferase, allosteric interaction, lyase; 2.50A {Sulfolobus solfataricus} SCOP: c.23.16.1
Probab=99.14 E-value=2.3e-11 Score=98.09 Aligned_cols=75 Identities=31% Similarity=0.347 Sum_probs=51.7
Q ss_pred ecCCeEEecCcccCCcceeEEeee-ccc--ccccccc-----------------ccceecc------cccccccccccEE
Q psy7151 18 LRPDLIESASHLASNKADVIKTHH-NDS--PLIRALR-----------------EQGKVIE------PLKDFHKDELRLY 71 (188)
Q Consensus 18 ~~g~~I~~~~~~~HGk~~~V~s~H-~~~--~Lf~~lp-----------------~~s~vi~------pi~Ai~~~~~~i~ 71 (188)
++|+.+.+.+...||....+ .+ .++ .||++++ ++..+++ +++|+++.+.++|
T Consensus 93 ~~gg~v~~~~~~~~g~~~~v--~~~~~~~~~l~~~~~~~~~v~~~H~~~v~~l~~~~~vla~s~~~g~i~a~~~~~~~~~ 170 (195)
T 1qdl_B 93 AFGAKIRRARKVFHGKISNI--ILVNNSPLSLYYGIAKEFKATRYHSLVVDEVHRPLIVDAISAEDNEIMAIHHEEYPIY 170 (195)
T ss_dssp HTTCEEEEEEEEEEEEEEEE--EECCSSCCSTTTTCCSEEEEEEEEEEEEECCCTTEEEEEEESSSCCEEEEEESSSSEE
T ss_pred HhCCEEeccCCCcCCCceEE--EECCCCHhHHHhcCCCceEEeccccchhhhCCCCcEEEEEECCCCcEEEEEeCCCCEE
Confidence 46777766665666655544 22 223 4554443 3332221 3778888777899
Q ss_pred EEeecccccCChhhHHHHHHHHH
Q psy7151 72 GLQFHPEVDLTNEGRTMLKNFLF 94 (188)
Q Consensus 72 GVQFHPE~~~t~~G~~il~nFl~ 94 (188)
|+|||||+..++.|..||+||+.
T Consensus 171 gvQfHPE~~~~~~g~~l~~~f~~ 193 (195)
T 1qdl_B 171 GVQFHPESVGTSLGYKILYNFLN 193 (195)
T ss_dssp EESSBTTSTTCTTHHHHHHHHHH
T ss_pred EEecCCCCCCCccHHHHHHHHHh
Confidence 99999999999999999999996
No 10
>1wl8_A GMP synthase [glutamine-hydrolyzing] subunit A; transferase, gatases, riken structural genomics/proteomics initiative, RSGI; 1.45A {Pyrococcus horikoshii} SCOP: c.23.16.1 PDB: 2d7j_A
Probab=99.13 E-value=4.8e-11 Score=95.36 Aligned_cols=77 Identities=23% Similarity=0.463 Sum_probs=53.0
Q ss_pred eecCCeEEecCcccCCcceeEEeeeccccccccc-----------------cccceecc-----cccccccccccEEEEe
Q psy7151 17 TLRPDLIESASHLASNKADVIKTHHNDSPLIRAL-----------------REQGKVIE-----PLKDFHKDELRLYGLQ 74 (188)
Q Consensus 17 ~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~l-----------------p~~s~vi~-----pi~Ai~~~~~~i~GVQ 74 (188)
.++|+.+.+.+.+.||..... .+..+.+|+++ |.+..+++ +++|+++.+.+++|+|
T Consensus 87 ~~~gg~v~~~~~~~~G~~~~~--~~~~~~l~~~~~~~~~~~~~h~~~v~~l~~~~~vla~s~~g~i~a~~~~~~~~~gvQ 164 (189)
T 1wl8_A 87 KFFGGKVGRGEKAEYSLVEIE--IIDEXEIFKGLPKRLKVWESHMDEVKELPPKFKILARSETCPIEAMKHEELPIYGVQ 164 (189)
T ss_dssp HHHTCEEEECSCCSCEEEEEE--ESCC--CCTTSCSEEEEEECCSEEEEECCTTEEEEEEESSCSCSEEEESSSCEEEES
T ss_pred HHhCCceecCCCcccCceeEE--EecCchHHhCCCCceEEEEEeeeehhhCCCCcEEEEEcCCCCEEEEEeCCceEEEEe
Confidence 457888887776777765443 12233344443 33333322 4788988777899999
Q ss_pred ecccccCChhhHHHHHHHHHH
Q psy7151 75 FHPEVDLTNEGRTMLKNFLFD 95 (188)
Q Consensus 75 FHPE~~~t~~G~~il~nFl~~ 95 (188)
||||+..++.|.+||+||+..
T Consensus 165 fHPE~~~~~~g~~l~~~f~~~ 185 (189)
T 1wl8_A 165 FHPEVAHTEKGEEILRNFAKL 185 (189)
T ss_dssp SCTTSTTSTTHHHHHHHHHHH
T ss_pred cCCCcCCCcchHHHHHHHHHH
Confidence 999999999999999999974
No 11
>4gud_A Imidazole glycerol phosphate synthase subunit His; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE 1PE; 1.91A {Vibrio cholerae}
Probab=99.05 E-value=7.5e-11 Score=95.44 Aligned_cols=31 Identities=39% Similarity=0.760 Sum_probs=25.7
Q ss_pred ccccEEEEeecccccCChhhHHHHHHHHHHhhC
Q psy7151 66 DELRLYGLQFHPEVDLTNEGRTMLKNFLFDVCG 98 (188)
Q Consensus 66 ~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~ 98 (188)
.++++||+|||||++ ++.|.+||+||++ +|+
T Consensus 175 ~~~~v~GvQFHPE~s-~~~G~~ll~nFl~-~~g 205 (211)
T 4gud_A 175 QAGNYYGVQFHPERS-SKAGARLIQNFLE-LRG 205 (211)
T ss_dssp EETTEEEESSCGGGS-HHHHHHHHHHHHH-C--
T ss_pred eCCCEEEEEccCEec-CccHHHHHHHHHH-Hhc
Confidence 346999999999986 8999999999995 565
No 12
>3r75_A Anthranilate/para-aminobenzoate synthases compone; ammonia channel, chorismate, type 1 glutamine amidotransfera phenazine biosynthesis, lyase; HET: CYG; 2.10A {Burkholderia SP} PDB: 3r74_A* 3r76_A*
Probab=99.05 E-value=9.2e-11 Score=111.26 Aligned_cols=85 Identities=12% Similarity=0.042 Sum_probs=61.7
Q ss_pred eeecCCeEEecCcccCCcceeEEeeeccccccccc-----------------cccceecc-----cccccccccccEEEE
Q psy7151 16 GTLRPDLIESASHLASNKADVIKTHHNDSPLIRAL-----------------REQGKVIE-----PLKDFHKDELRLYGL 73 (188)
Q Consensus 16 g~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~l-----------------p~~s~vi~-----pi~Ai~~~~~~i~GV 73 (188)
+.+||+.|.+.+.+.||+.+.+ .+....++.++ |+++.+++ +++|+++. ++|||
T Consensus 535 a~alGG~V~~~~~~~~G~~~~i--~~~~~~l~~~~~~~~~v~~~h~~~~~~lp~g~~v~A~s~dg~i~Ai~~~--~~~GV 610 (645)
T 3r75_A 535 NAILGIPLVRREVPNQGIQVEI--DLFGQRERVGFYNTYVAQTVRDEMDVDGVGTVAISRDPRTGEVHALRGP--TFSSM 610 (645)
T ss_dssp HHHTTCCEEEEEEEEEEEEEEE--EETTEEEEEEEEEEEEEBCSCSEEEETTTEEEEEEECTTTCBEEEEEET--TEEEE
T ss_pred HHHhCCEEEcCCCcccccceEE--eeecCcceecCCCcEEEEEehhhccccCCCCeEEEEEcCCCcEEEEEcC--CEEEE
Confidence 3578999999999999988776 33344444433 33333332 47889875 57999
Q ss_pred eecccccCChhhHHHHHHHHHHhhCCCCCcc
Q psy7151 74 QFHPEVDLTNEGRTMLKNFLFDVCGLTGNFT 104 (188)
Q Consensus 74 QFHPE~~~t~~G~~il~nFl~~i~~~~~~W~ 104 (188)
|||||+++|+.|..||+||+..+...++.|+
T Consensus 611 QFHPE~~~t~~G~~Ll~nFl~~~~~~~~~~~ 641 (645)
T 3r75_A 611 QFHAESVLTVDGPRILGEAITHAIRREKRMT 641 (645)
T ss_dssp SSBTTSTTCTTHHHHHHHHHHHHTTTTC---
T ss_pred EeCCeecCCcchHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999998876665543
No 13
>3fij_A LIN1909 protein; 11172J, uncharacterized protein, nysgrc, PSI-II, structural genomics, protein structure initiative; 2.30A {Listeria innocua}
Probab=98.93 E-value=7.8e-10 Score=92.95 Aligned_cols=62 Identities=19% Similarity=0.331 Sum_probs=49.5
Q ss_pred ceeEEeeeccccccccccccceecc-----cccccccc-ccc-EEEEeecccccCC--hhhHHHHHHHHHHhh
Q psy7151 34 ADVIKTHHNDSPLIRALREQGKVIE-----PLKDFHKD-ELR-LYGLQFHPEVDLT--NEGRTMLKNFLFDVC 97 (188)
Q Consensus 34 ~~~V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~-~~~-i~GVQFHPE~~~t--~~G~~il~nFl~~i~ 97 (188)
...++++|++. ++.+|+++.+++ .++|+++. +.+ ++|||||||.+.+ +.|..||+||+..+.
T Consensus 171 ~~~v~~~H~~~--v~~l~~g~~v~a~s~dg~ieai~~~~~~~~~~gvQfHPE~~~~~~~~~~~lf~~Fv~~~~ 241 (254)
T 3fij_A 171 KKLVNSLHHQF--IKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPELMFQTDPESEQLFQALVDESK 241 (254)
T ss_dssp TEEECCBCSCE--ESSCCSSEEEEEEETTCCEEEEEESSCSSCEEEESSCGGGTGGGCHHHHHHHHHHHHHHH
T ss_pred cEEEEEeccch--hhccCCCcEEEEEeCCCcEEEEEecCCCCeEEEEEcCCccCCCCCchHHHHHHHHHHHHH
Confidence 44577778877 777887766654 48899988 776 9999999999986 789999999996543
No 14
>2v4u_A CTP synthase 2; pyrimidine biosynthesis, glutamine amidotransferase, glutaminase domain, 5-OXO-L-norleucine, DON, ligase, phosphoprotein; HET: CYD; 2.3A {Homo sapiens} PDB: 2vkt_A
Probab=98.84 E-value=1.1e-09 Score=94.02 Aligned_cols=71 Identities=15% Similarity=0.290 Sum_probs=55.2
Q ss_pred CcceeEEeeec-------ccccccccc-ccceecc-----c-ccccccccccEE-EEeecccccCChh-hHHHHHHHHHH
Q psy7151 32 NKADVIKTHHN-------DSPLIRALR-EQGKVIE-----P-LKDFHKDELRLY-GLQFHPEVDLTNE-GRTMLKNFLFD 95 (188)
Q Consensus 32 Gk~~~V~s~H~-------~~~Lf~~lp-~~s~vi~-----p-i~Ai~~~~~~i~-GVQFHPE~~~t~~-G~~il~nFl~~ 95 (188)
|+...|+++|+ +. ++.+| .++.+++ . ++|+++.+.+++ |||||||+..++. +..||+||+..
T Consensus 196 ~~~~~v~~~H~H~y~vn~~~--v~~l~~~g~~v~A~s~dg~~ieaie~~~~p~~lGvQfHPE~~~~~~~~~~lf~~Fv~~ 273 (289)
T 2v4u_A 196 GDVPFIEERHRHRFEVNPNL--IKQFEQNDLSFVGQDVDGDRMEIIELANHPYFVGVQFHPEFSSRPMKPSPPYLGLLLA 273 (289)
T ss_dssp TSCSEEEEEEEECEEECGGG--SGGGTTSSEEEEEEETTSCSEEEEEESSSSCEEEESSBGGGGCBTTBCCHHHHHHHHH
T ss_pred CCCceEEEecccccccCHHH--HHhcccCCeEEEEEcCCCCeEEEEEcCCCCeEEEEECCCCCCCCCCchHHHHHHHHHH
Confidence 33346777765 55 78888 7766654 3 899999877765 9999999998765 79999999999
Q ss_pred hhCCCCCcc
Q psy7151 96 VCGLTGNFT 104 (188)
Q Consensus 96 i~~~~~~W~ 104 (188)
++++..+|.
T Consensus 274 ~~~~~~~~~ 282 (289)
T 2v4u_A 274 ATGNLNAYL 282 (289)
T ss_dssp HHTCHHHHH
T ss_pred HHhhhhhhh
Confidence 988877654
No 15
>3d54_D Phosphoribosylformylglycinamidine synthase 1; alpha-beta structure, ATP-binding, cytoplasm, ligase, nucleotide-binding, purine biosynthesis; HET: CYG ADP; 3.50A {Thermotoga maritima}
Probab=98.81 E-value=1.9e-09 Score=86.73 Aligned_cols=38 Identities=18% Similarity=0.419 Sum_probs=32.2
Q ss_pred cccccccccccEEEEeecccccC-----ChhhHHHHHHHHHHh
Q psy7151 59 PLKDFHKDELRLYGLQFHPEVDL-----TNEGRTMLKNFLFDV 96 (188)
Q Consensus 59 pi~Ai~~~~~~i~GVQFHPE~~~-----t~~G~~il~nFl~~i 96 (188)
+++|+++.+.++||||||||++. ++.|.+||+||+..+
T Consensus 169 ~i~a~~~~~~~~~gvQfHPE~~~~~~~~~~~g~~l~~~f~~~~ 211 (213)
T 3d54_D 169 RIAGVLNESGNVFGLMPHPERAVEELIGGEDGKKVFQSILNYL 211 (213)
T ss_dssp GEEEEECSSSCEEEECSCSTTTTSTTTTCSTTSHHHHHHHHHC
T ss_pred ceeEEEcCCCCEEEEeCCHHHhcCHhhhcCccHHHHHHHHHHh
Confidence 36677776779999999999987 689999999999753
No 16
>3q4g_A NH(3)-dependent NAD(+) synthetase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 2.40A {Vibrio cholerae} SCOP: c.26.2.0
Probab=98.77 E-value=1.1e-09 Score=94.43 Aligned_cols=69 Identities=13% Similarity=0.150 Sum_probs=55.6
Q ss_pred HHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhc---CC----------CCCceEEEEe
Q psy7151 90 KNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRH---PF----------PGPGLAIRVI 156 (188)
Q Consensus 90 ~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~---~~----------p~~~L~v~~~ 156 (188)
+.=+...|++.++|++++.++.++.|||+++...+....++|+|||+||++++.. ++ .-+.+++.||
T Consensus 5 ~~~~~~~~~~~~~~~~~~~i~~~v~~L~d~l~~~g~~~vvvglSGGvDSal~a~l~~~A~~~Lg~~~~~~~~~v~av~~p 84 (279)
T 3q4g_A 5 EHKIREEMRVLPSIDPQFEIERRVAFIKRKLTEARYKSLVLGISGGVDSTTCGRLAQLAVEELNQQHNTTEYQFIAVRLP 84 (279)
T ss_dssp HHHHHHHHTCCSSCCHHHHHHHHHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHTTCSCCEEEEEECC
T ss_pred HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCEEEEccCCHHHHHHHHHHHHHHHHhCcccccCCceEEEEEec
Confidence 3445688999999999999999999999999865544555599999999999853 32 1268999999
Q ss_pred cC
Q psy7151 157 CG 158 (188)
Q Consensus 157 ~~ 158 (188)
..
T Consensus 85 ~~ 86 (279)
T 3q4g_A 85 YG 86 (279)
T ss_dssp SS
T ss_pred CC
Confidence 54
No 17
>2w7t_A CTP synthetase, putative cytidine triphosphate synthase; glutaminase domain, trypsanosoma brucei, ligase, acivicin; HET: 5CS; 2.10A {Trypanosoma brucei}
Probab=98.77 E-value=3.9e-09 Score=89.94 Aligned_cols=71 Identities=17% Similarity=0.220 Sum_probs=52.0
Q ss_pred ceeEEeeec-------cccccccc-cccceec----------ccccccccccccE-EEEeecccccCChh-hHHHHHHHH
Q psy7151 34 ADVIKTHHN-------DSPLIRAL-REQGKVI----------EPLKDFHKDELRL-YGLQFHPEVDLTNE-GRTMLKNFL 93 (188)
Q Consensus 34 ~~~V~s~H~-------~~~Lf~~l-p~~s~vi----------~pi~Ai~~~~~~i-~GVQFHPE~~~t~~-G~~il~nFl 93 (188)
...++++|+ +. ++.+ |.++.++ ..++|+++.+.++ +|||||||++.++. +..||+||+
T Consensus 174 ~~~v~~~H~Hsy~v~~~~--v~~l~~~g~~v~A~s~d~~~~g~~ieaie~~~~p~~~GvQfHPE~~~~~~~~~~l~~~Fv 251 (273)
T 2w7t_A 174 SNIVVERHRHRYEVNTAY--FEDLRKAGLCISAVTDPTFSSRCRVEAVENPSLRFFLAVQFHPEFISTPMDPAPTYLSFM 251 (273)
T ss_dssp CSEEEEEEEECCEECGGG--HHHHHHTTCEEEEESCTTCCTTCCEEEEECTTSSSEEEESSCGGGSCBTTBCCHHHHHHH
T ss_pred CceEEeecccccccCHHH--HHhhccCCcEEEEEcCCcCCCCCeEEEEEcCCCCeEEEEeCCCCcCCCCCchHHHHHHHH
Confidence 456777654 33 4455 5555442 1578999887775 59999999998876 599999999
Q ss_pred HHhhCCCCCcccc
Q psy7151 94 FDVCGLTGNFTLK 106 (188)
Q Consensus 94 ~~i~~~~~~W~~~ 106 (188)
..+.+...+|..+
T Consensus 252 ~~~~~~~~~~~~~ 264 (273)
T 2w7t_A 252 AAAAKKDYVWPQK 264 (273)
T ss_dssp HHHHTCCCCCCSS
T ss_pred HHHHHHHHhhhhc
Confidence 9988877777643
No 18
>1a9x_B Carbamoyl phosphate synthetase (small chain); amidotransferase, thioester; HET: CYG ADP; 1.80A {Escherichia coli} SCOP: c.8.3.1 c.23.16.1 PDB: 1bxr_B* 1ce8_B* 1jdb_C* 1cs0_B* 1m6v_B* 1c30_B* 1c3o_B* 1kee_B* 1t36_B*
Probab=98.68 E-value=6.7e-09 Score=93.04 Aligned_cols=79 Identities=11% Similarity=0.172 Sum_probs=55.8
Q ss_pred eeecCCeEEecCcccCCcceeE-----------Eeeeccccccc--cccccceecc------cccccccccccEEEEeec
Q psy7151 16 GTLRPDLIESASHLASNKADVI-----------KTHHNDSPLIR--ALREQGKVIE------PLKDFHKDELRLYGLQFH 76 (188)
Q Consensus 16 g~~~g~~I~~~~~~~HGk~~~V-----------~s~H~~~~Lf~--~lp~~s~vi~------pi~Ai~~~~~~i~GVQFH 76 (188)
+.++|+.+.+.+...||..+.+ ...|+.. ++ .+|.+..+.+ .++|+++.++++||||||
T Consensus 275 a~A~GG~v~k~~~gh~g~n~pv~~~~~g~v~its~~H~~a--V~~~~Lp~~~~v~a~s~~Dg~ieai~~~~~pi~gVQFH 352 (379)
T 1a9x_B 275 ALASGAKTVKMKFGHHGGNHPVKDVEKNVVMITAQNHGFA--VDEATLPANLRVTHKSLFDGTLQGIHRTDKPAFSFQGN 352 (379)
T ss_dssp HHHTTCCEEEEEEEEEEEEEEEEETTTTEEEEEEEEEEEE--ECSTTCCTTEEEEEEETTTCCEEEEEESSSSEEEESSC
T ss_pred HHHhCcEEEecccccccCceeeEecCCCcEEEEecCccce--EecccCCCCeEEEEEeCCCCcEEEEEECCCCEEEEEeC
Confidence 3467788877765555543332 1236555 44 3776655432 488999988899999999
Q ss_pred ccccCCh-hhHHHHHHHHHHh
Q psy7151 77 PEVDLTN-EGRTMLKNFLFDV 96 (188)
Q Consensus 77 PE~~~t~-~G~~il~nFl~~i 96 (188)
||...++ ++..||+||+..+
T Consensus 353 PE~~~~p~d~~~Lf~~Fl~~~ 373 (379)
T 1a9x_B 353 PEASPGPHDAAPLFDHFIELI 373 (379)
T ss_dssp TTCSSSCSTTTHHHHHHHHHH
T ss_pred CcCCCCcccHHHHHHHHHHHH
Confidence 9999876 5799999999765
No 19
>1gpw_B Amidotransferase HISH; lyase/transferase, complex (lyase/transferase), histidine biosynthesis, glutaminase, glutamine amidotransferase; 2.4A {Thermotoga maritima} SCOP: c.23.16.1 PDB: 1k9v_F 1kxj_A 2wjz_B
Probab=98.63 E-value=2.1e-08 Score=80.46 Aligned_cols=56 Identities=23% Similarity=0.332 Sum_probs=40.7
Q ss_pred eeEEeeeccccccccccccceec-------ccccccccccccEEEEeecccccCChhhHHHHHHHHHHh
Q psy7151 35 DVIKTHHNDSPLIRALREQGKVI-------EPLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 35 ~~V~s~H~~~~Lf~~lp~~s~vi-------~pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i 96 (188)
..++++|++. +..+ +..++ .+++|+++.+ ++||+|||||++ ++.|.+||+||+..+
T Consensus 135 ~~v~~~H~~~--v~~~--~~~vla~s~~~g~~~~a~~~~~-~i~gvQfHPE~~-~~~~~~l~~~f~~~~ 197 (201)
T 1gpw_B 135 GYYYFVHTYR--AVCE--EEHVLGTTEYDGEIFPSAVRKG-RILGFQFHPEKS-SKIGRKLLEKVIECS 197 (201)
T ss_dssp EEEEEEESEE--EEEC--GGGEEEEEEETTEEEEEEEEET-TEEEESSCGGGS-HHHHHHHHHHHHHHS
T ss_pred CeEEEECcce--eccC--CCEEEEEEccCCceEEEEEECC-CEEEEECCCccc-CHhHHHHHHHHHHHh
Confidence 3566678776 4433 22221 1477887755 899999999999 889999999999753
No 20
>1wxi_A NH(3)-dependent NAD(+) synthetase; NADE, E.coli, ligase; HET: AMP; 1.70A {Escherichia coli} SCOP: c.26.2.1 PDB: 1wxf_A 1wxg_A* 1wxh_A* 1wxe_A* 3hmq_A*
Probab=98.60 E-value=6.3e-09 Score=89.06 Aligned_cols=62 Identities=13% Similarity=0.200 Sum_probs=48.0
Q ss_pred hCCCCCcccchHHHHHHHHHHHHhCCCc-EEEEeeccccCCChhhHh---hcCCC-------C---CceEEEEecC
Q psy7151 97 CGLTGNFTLKSREEELIKYVKETVGNMK-VLVRKLGLDLGLTPEVVM---RHPFP-------G---PGLAIRVICG 158 (188)
Q Consensus 97 ~~~~~~W~~~~~ie~iI~~IRe~Vg~~k-Vi~~~~GlSGGvDSavva---~~~~p-------~---~~L~v~~~~~ 158 (188)
-++.++|+++..++.++.|||+++...+ ....++|+||||||+|+| +.++. + +++|+.||..
T Consensus 11 ~~~~~~~~~~~~i~~~~~~L~~~l~~~g~~~~vvvglSGGvDSsv~a~L~~~a~~~lg~~~~~~~~~v~av~~~~~ 86 (275)
T 1wxi_A 11 LGAKPQINAEEEIRRSVDFLKSYLQTYPFIKSLVLGISGGQDSTLAGKLCQMAINELRLETGNESLQFIAVRLPYG 86 (275)
T ss_dssp HTCCSCCCHHHHHHHHHHHHHHHHHHSTTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHHHCCTTCEEEEEECCSS
T ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCCEEEECcCcHHHHHHHHHHHHHHHHhccccccccceEEEEEeCCC
Confidence 4899999999999999999999995433 223334999999999999 44331 1 6899999853
No 21
>2ywj_A Glutamine amidotransferase subunit PDXT; uncharacterized conserved protein, structural genomics; 1.90A {Methanocaldococcus jannaschii}
Probab=98.57 E-value=4.8e-08 Score=77.46 Aligned_cols=55 Identities=18% Similarity=0.294 Sum_probs=41.6
Q ss_pred eEEeeeccccccccc-cccceecc----cccccccccccEEEEeecccccCChhhHHHHHHHHHHh
Q psy7151 36 VIKTHHNDSPLIRAL-REQGKVIE----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 36 ~V~s~H~~~~Lf~~l-p~~s~vi~----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i 96 (188)
.+++.|++. ++.+ |+++.+++ .++|+++ +++||+|||||.+. .|.+||+||+..+
T Consensus 124 ~~~~~H~~~--v~~l~~~~~~v~a~sd~~~~a~~~--~~~~gvQfHPE~~~--~g~~l~~~F~~~~ 183 (186)
T 2ywj_A 124 YGVFIRAPV--VDKILSDDVEVIARDGDKIVGVKQ--GKYMALSFHPELSE--DGYKVYKYFVENC 183 (186)
T ss_dssp EEEESSCCE--EEEECCTTCEEEEEETTEEEEEEE--TTEEEESSCGGGST--THHHHHHHHHHHH
T ss_pred EEEEEecce--eeecCCCCeEEEEEECCEEEEEee--CCEEEEECCCCcCC--chhHHHHHHHHHH
Confidence 345557776 6777 77766654 3678876 48999999999754 5999999999764
No 22
>1kqp_A NAD+ synthase, NH(3)-dependent NAD(+) synthetase, SPOR; ligase, amidotransferase, ATP pyrophosphatase, NAD-adenylate; HET: ADJ; 1.03A {Bacillus subtilis} SCOP: c.26.2.1 PDB: 1fyd_A* 1ifx_A* 1ee1_A* 1ih8_A* 1nsy_A* 2nsy_A* 2pzb_A 2pza_A* 2pz8_A
Probab=98.47 E-value=9.6e-08 Score=81.30 Aligned_cols=58 Identities=14% Similarity=0.197 Sum_probs=47.6
Q ss_pred hCCCCCcccchHHHHHHHHHHHHhC---CCcEEEEeeccccCCChhhHh---hcCCC--------CCceEEEEec
Q psy7151 97 CGLTGNFTLKSREEELIKYVKETVG---NMKVLVRKLGLDLGLTPEVVM---RHPFP--------GPGLAIRVIC 157 (188)
Q Consensus 97 ~~~~~~W~~~~~ie~iI~~IRe~Vg---~~kVi~~~~GlSGGvDSavva---~~~~p--------~~~L~v~~~~ 157 (188)
.++.++|+++..++.++.|||++|. .++|++ |+||||||+|+| +.+++ .+.+++.||.
T Consensus 10 ~~~~~~~~~~~~i~~~~~~L~d~v~~~g~~~vvv---gLSGGvDSsv~a~La~~a~~~lg~~~~~~~v~av~~~~ 81 (271)
T 1kqp_A 10 LHVKPSIDPKQEIEDRVNFLKQYVKKTGAKGFVL---GISGGQDSTLAGRLAQLAVESIREEGGDAQFIAVRLPH 81 (271)
T ss_dssp HTCCSSCCHHHHHHHHHHHHHHHHHHHTCCEEEE---ECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCS
T ss_pred hCCCCCCCHHHHHHHHHHHHHHHHHHcCCCCEEE---ECCCCHHHHHHHHHHHHHHHHhcccCCCceEEEEEeCC
Confidence 4899999999999999999999994 456666 999999999996 33331 2688999884
No 23
>1l9x_A Gamma-glutamyl hydrolase; 1.60A {Homo sapiens} SCOP: c.23.16.1
Probab=98.46 E-value=4.6e-08 Score=84.92 Aligned_cols=62 Identities=19% Similarity=0.294 Sum_probs=43.1
Q ss_pred eeccccccc--------cccccceecc-----c---ccccccccccEEEEeecccccCCh---------------hhHHH
Q psy7151 40 HHNDSPLIR--------ALREQGKVIE-----P---LKDFHKDELRLYGLQFHPEVDLTN---------------EGRTM 88 (188)
Q Consensus 40 ~H~~~~Lf~--------~lp~~s~vi~-----p---i~Ai~~~~~~i~GVQFHPE~~~t~---------------~G~~i 88 (188)
.|++. ++ .+|.++.+++ . ++++++.+.++||||||||+..|+ .|..|
T Consensus 191 ~H~~~--V~~~~~~~~~~l~~g~~v~A~s~dg~ve~i~~i~~~~~~i~GVQfHPE~~~~e~~~~~~~p~s~~a~~~~~~l 268 (315)
T 1l9x_A 191 FHKWS--LSVKNFTMNEKLKKFFNVLTTNTDGKIEFISTMEGYKYPVYGVQWHPEKAPYEWKNLDGISHAPNAVKTAFYL 268 (315)
T ss_dssp EEEEE--CBHHHHHTCHHHHHHEEEEEEEESSSCEEEEEEEESSSCEEEESSCTTHHHHCCSSCTTCCCCHHHHHHHHHH
T ss_pred hhhhh--cCccccccccccCCCCEEEEEcCCCCEEEEEEeccCCCCEEEEEeCCCCCcccccccccCCccHHHHHHHHHH
Confidence 57776 55 5666665543 2 445577667899999999996521 47899
Q ss_pred HHHHHHHhhCCCCCc
Q psy7151 89 LKNFLFDVCGLTGNF 103 (188)
Q Consensus 89 l~nFl~~i~~~~~~W 103 (188)
|++|+....+....|
T Consensus 269 f~~Fv~~a~~~~~~f 283 (315)
T 1l9x_A 269 AEFFVNEARKNNHHF 283 (315)
T ss_dssp HHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHhccCCC
Confidence 999998765544434
No 24
>3dpi_A NAD+ synthetase; ssgcid, decode, structural genomics, PSI, protein structure initiative; 2.20A {Burkholderia pseudomallei} SCOP: c.26.2.0
Probab=98.39 E-value=1e-07 Score=82.39 Aligned_cols=70 Identities=14% Similarity=0.196 Sum_probs=53.9
Q ss_pred HHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHh---hcC----CCC----CceEEEEecC
Q psy7151 90 KNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVM---RHP----FPG----PGLAIRVICG 158 (188)
Q Consensus 90 ~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva---~~~----~p~----~~L~v~~~~~ 158 (188)
+.=+-.-.+..+.++++..++.++.|||+++.+.+....++|+|||+||+|++ +.+ .++ ..+++.||..
T Consensus 11 ~~~i~~~~~~~~~~~~~~~i~~~v~~L~d~l~~~g~~~vvvglSGGiDSal~a~La~~A~daLG~~~~~~~viav~~p~~ 90 (285)
T 3dpi_A 11 RRAIAAELHVSPTFDARDEAERRIGFVADYLRTAGLRACVLGISGGIDSSTAGRLAQLAVERLRASGYDARFVAMRLPYG 90 (285)
T ss_dssp HHHHHHHTTCCSSCCHHHHHHHHHHHHHHHHHHHTCCEEEEECCSSHHHHHHHHHHHHHHHHHHHTTCCCEEEEEECCSC
T ss_pred HHHHHHHhCCCCCCCHHHHHHHHHHHHHHHHHHcCCCcEEEEccCChhHHHHHHHHHHHHHHhcccCcccEEEEEEcCCC
Confidence 33344567889999999999999999999998766555666999999999995 322 122 4789999864
Q ss_pred C
Q psy7151 159 E 159 (188)
Q Consensus 159 ~ 159 (188)
.
T Consensus 91 ~ 91 (285)
T 3dpi_A 91 A 91 (285)
T ss_dssp C
T ss_pred C
Confidence 3
No 25
>3nva_A CTP synthase; rossman fold, nucleotide binding, LIG; 2.50A {Sulfolobus solfataricus}
Probab=98.37 E-value=5.8e-08 Score=90.40 Aligned_cols=58 Identities=14% Similarity=0.108 Sum_probs=42.9
Q ss_pred eEEeeeccccccccccccceecc-----ccccccccccc-EEEEeecccccCCh-hhHHHHHHHHHHhh
Q psy7151 36 VIKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELR-LYGLQFHPEVDLTN-EGRTMLKNFLFDVC 97 (188)
Q Consensus 36 ~V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~-i~GVQFHPE~~~t~-~G~~il~nFl~~i~ 97 (188)
.||+.|++. ++ +.++.+++ .++|+++++.| ++|||||||...++ .+..||+||+....
T Consensus 469 eVNs~h~q~--l~--~~GL~vsA~s~DG~IEAIE~~~~pf~vGVQfHPE~~~~p~~~~~LF~~Fv~Aa~ 533 (535)
T 3nva_A 469 EVNPKYVDI--LE--DAGLVVSGISENGLVEIIELPSNKFFVATQAHPEFKSRPTNPSPIYLGFIRAVA 533 (535)
T ss_dssp EECHHHHHH--HH--HTTCEEEEECTTCCEEEEECTTSSCEEEESSCGGGGCCSSSCCHHHHHHHHHHT
T ss_pred eechHHHhh--cc--cCCeEEEEEeCCCCEEEEEeCCCCcEEEEEeCCEecCCCCChhHHHHHHHHHHH
Confidence 455555555 33 34555544 38999999887 69999999999876 48999999997643
No 26
>3fiu_A NH(3)-dependent NAD(+) synthetase; rossman fold, adenine nucleotide alpha hydrolase-like, ATP- binding, ligase, nucleotide-binding; HET: AMP; 1.85A {Francisella tularensis subsp}
Probab=98.31 E-value=2.5e-07 Score=77.94 Aligned_cols=57 Identities=16% Similarity=0.196 Sum_probs=43.5
Q ss_pred CCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhh---cCCCCCceEEEEecC
Q psy7151 101 GNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMR---HPFPGPGLAIRVICG 158 (188)
Q Consensus 101 ~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~---~~~p~~~L~v~~~~~ 158 (188)
++++++..++.++.|||++|...+.-..++|+|||+||++++. ..+++. +++.|+..
T Consensus 5 ~~~~~~~~~~~l~~~l~~~v~~~~~~~vvv~lSGGiDSsv~a~l~~~~~~~~-~av~~~~~ 64 (249)
T 3fiu_A 5 KDFSPKEYSQKLVNWLSDSCMNYPAEGFVIGLSGGIDSAVAASLAVKTGLPT-TALILPSD 64 (249)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHTTTCSEEEEECCSSHHHHHHHHHHHHTTSCE-EEEECCCT
T ss_pred ccCCHHHHHHHHHHHHHHHHHHhCCCCEEEEecCcHHHHHHHHHHHHhCCCC-EEEEecCC
Confidence 4689999999999999999975543334449999999999993 344544 48888854
No 27
>1s1m_A CTP synthase; CTP synthetase, UTP:ammonia ligase (ADP-forming), cytidine 5 triphosphate synthase, ammonia lyase; 2.30A {Escherichia coli} SCOP: c.23.16.1 c.37.1.10 PDB: 2ad5_A*
Probab=98.24 E-value=1.6e-07 Score=87.73 Aligned_cols=38 Identities=21% Similarity=0.367 Sum_probs=33.8
Q ss_pred cccccccccccEE-EEeecccccCChh-hHHHHHHHHHHh
Q psy7151 59 PLKDFHKDELRLY-GLQFHPEVDLTNE-GRTMLKNFLFDV 96 (188)
Q Consensus 59 pi~Ai~~~~~~i~-GVQFHPE~~~t~~-G~~il~nFl~~i 96 (188)
.++|+++.+.|+| |||||||+..++. |..||+||+..+
T Consensus 497 ~VEaie~~~~p~flGVQFHPE~~~~p~~g~~LF~~Fv~aa 536 (545)
T 1s1m_A 497 LVEIIEVPNHPWFVACQFHPEFTSTPRDGHPLFAGFVKAA 536 (545)
T ss_dssp CEEEEECTTSSSEEEESSCGGGTCCTTTCCHHHHHHHHHH
T ss_pred ceEEEEeCCCCEEEEEeCCCCCCCCCCChHHHHHHHHHHH
Confidence 4889999988887 9999999998886 899999999764
No 28
>3m3p_A Glutamine amido transferase; structural genomics, nysgrc, PSI-2; HET: MSE; 1.30A {Methylobacillus flagellatus} PDB: 3l83_A*
Probab=98.23 E-value=2.9e-07 Score=77.73 Aligned_cols=76 Identities=12% Similarity=0.057 Sum_probs=49.6
Q ss_pred eecCCeEEecCcccCCcce-------------------eEEeeeccccccccccccceecc-----cccccccccccEEE
Q psy7151 17 TLRPDLIESASHLASNKAD-------------------VIKTHHNDSPLIRALREQGKVIE-----PLKDFHKDELRLYG 72 (188)
Q Consensus 17 ~~~g~~I~~~~~~~HGk~~-------------------~V~s~H~~~~Lf~~lp~~s~vi~-----pi~Ai~~~~~~i~G 72 (188)
.++|+.|.+.+.+.+|... .++++|++. + .+|++..+++ +++|+++.+ ++||
T Consensus 97 ~~lGG~V~~~~~~e~G~~~v~~~~~~~~~~l~g~~~~~~v~~~H~~~--v-~lp~~~~vlA~s~~~~~~a~~~~~-~~~G 172 (250)
T 3m3p_A 97 KAMGGEVTDSPHAEIGWVRAWPQHVPQALEWLGTWDELELFEWHYQT--F-SIPPGAVHILRSEHCANQAYVLDD-LHIG 172 (250)
T ss_dssp HHTTCCEEEEEEEEEEEEEEEECSSHHHHHHHSCSSCEEEEEEEEEE--E-CCCTTEEEEEEETTEEEEEEEETT-TEEE
T ss_pred HHhCCEEEeCCCCceeeEEEEEecCCCCcccccCCCccEEEEEccce--e-ecCCCCEEEEEeCCCCEEEEEECC-eeEE
Confidence 4678888877766666432 234445544 3 4555554433 578888765 6999
Q ss_pred EeecccccCChhhHHHHHHHHHHhh
Q psy7151 73 LQFHPEVDLTNEGRTMLKNFLFDVC 97 (188)
Q Consensus 73 VQFHPE~~~t~~G~~il~nFl~~i~ 97 (188)
||||||+. .+.+..++++|-..+.
T Consensus 173 vQfHPE~~-~~~~~~~l~~~~~~l~ 196 (250)
T 3m3p_A 173 FQCHIEMQ-AHMVREWCSISPEELK 196 (250)
T ss_dssp ESSCTTCC-HHHHHHHHHHCGGGST
T ss_pred EEeCCcCC-HHHHHHHHHhhHHHHh
Confidence 99999985 3456777777765554
No 29
>3l7n_A Putative uncharacterized protein; glutamine amidotransferase, transferas; 2.70A {Streptococcus mutans}
Probab=98.13 E-value=9.1e-07 Score=73.18 Aligned_cols=74 Identities=11% Similarity=0.130 Sum_probs=47.2
Q ss_pred eeecCCeEEecCcccCCcceeEEeeec--cccccccccc----------------cceecc-----cccccccccccEEE
Q psy7151 16 GTLRPDLIESASHLASNKADVIKTHHN--DSPLIRALRE----------------QGKVIE-----PLKDFHKDELRLYG 72 (188)
Q Consensus 16 g~~~g~~I~~~~~~~HGk~~~V~s~H~--~~~Lf~~lp~----------------~s~vi~-----pi~Ai~~~~~~i~G 72 (188)
+.++|+.+.+.+.+.+|... |..... .++||+++|. +..+++ +++|+.+. .++||
T Consensus 98 ~~~~Gg~v~~~~~~~~G~~~-v~~~~~~~~~~l~~~~~~~~~v~~~H~~~~~lp~~~~vla~s~~~~~~a~~~~-~~v~g 175 (236)
T 3l7n_A 98 GVAYGADYLHSPKKEIGNYL-ISLTEAGKMDSYLSDFSDDLLVGHWHGDMPGLPDKAQVLAISQGCPRQIIKFG-PKQYA 175 (236)
T ss_dssp HHHTTCCCEEEEEEEEEEEE-EEECTTGGGCGGGTTSCSEEEEEEEEEEECCCCTTCEEEEECSSCSCSEEEEE-TTEEE
T ss_pred HHHhCCEEecCCCceeeeEE-EEEccCcccChHHhcCCCCcEEEEecCCcccCCChheEEEECCCCCEEEEEEC-CCEEE
Confidence 34678888887777777543 321111 2446665552 222221 36677765 48999
Q ss_pred EeecccccCChhhHHHHHHHHHHh
Q psy7151 73 LQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 73 VQFHPE~~~t~~G~~il~nFl~~i 96 (188)
+|||||.. ..+++||+...
T Consensus 176 vQfHPE~~-----~~~~~~~~~~~ 194 (236)
T 3l7n_A 176 FQCHLEFT-----PELVAALIAQE 194 (236)
T ss_dssp ESSBSSCC-----HHHHHHHHHHC
T ss_pred EEeCCCCC-----HHHHHHHHHhh
Confidence 99999996 78999998753
No 30
>1ka9_H Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.23.16.1
Probab=98.11 E-value=7.2e-07 Score=71.64 Aligned_cols=34 Identities=26% Similarity=0.433 Sum_probs=26.9
Q ss_pred ccccccccccEEEEeecccccCChhhHHHH---HHHHHH
Q psy7151 60 LKDFHKDELRLYGLQFHPEVDLTNEGRTML---KNFLFD 95 (188)
Q Consensus 60 i~Ai~~~~~~i~GVQFHPE~~~t~~G~~il---~nFl~~ 95 (188)
++++.+.+ ++||+|||||++. +.|.+|| +||+..
T Consensus 163 ~~~~~~~~-~i~gvQfHPE~~~-~~g~~l~~~~~~F~~~ 199 (200)
T 1ka9_H 163 FTALLAKE-NLLAPQFHPEKSG-KAGLAFLALARRYFEV 199 (200)
T ss_dssp EEEEEECS-SEEEESSCTTSSH-HHHHHHHHHHHHHC--
T ss_pred EEEEEeeC-CEEEEecCCCcCc-cchhHHHHHHHHHHhh
Confidence 45555544 8999999999996 8999999 999853
No 31
>1o1y_A Conserved hypothetical protein TM1158; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG; 1.70A {Thermotoga maritima} SCOP: c.23.16.1
Probab=98.09 E-value=1.4e-06 Score=72.43 Aligned_cols=30 Identities=30% Similarity=0.416 Sum_probs=23.9
Q ss_pred cccccccccccEEEEeecccccCChhhHHHHHHHHHH
Q psy7151 59 PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFD 95 (188)
Q Consensus 59 pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~ 95 (188)
+++|+++.+ +||+|||||+.. .+++||+..
T Consensus 170 ~iea~~~~~--i~gvQfHPE~~~-----~~~~~~~~~ 199 (239)
T 1o1y_A 170 ENQGFVYGK--AVGLQFHIEVGA-----RTMKRWIEA 199 (239)
T ss_dssp SCSEEEETT--EEEESSBSSCCH-----HHHHHHHHH
T ss_pred CEEEEEECC--EEEEEeCccCCH-----HHHHHHHHH
Confidence 377888753 999999999953 489999864
No 32
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=98.00 E-value=2.2e-06 Score=74.05 Aligned_cols=51 Identities=22% Similarity=0.225 Sum_probs=41.7
Q ss_pred cccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCC---CCCceEEEEe
Q psy7151 103 FTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPF---PGPGLAIRVI 156 (188)
Q Consensus 103 W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~---p~~~L~v~~~ 156 (188)
|+|++++++++++||++++++++++ ++|||+||++++..+. ..+..++.+.
T Consensus 1 ~~~~~~~~~~~~~ir~~v~~~kvlv---alSGGvDSsvla~ll~~~~g~~v~av~vd 54 (308)
T 2dpl_A 1 MDWGRFVEEKVREIRETVGDSKAII---ALSGGVDSSTAAVLAHKAIGDRLHAVFVN 54 (308)
T ss_dssp CCHHHHHHHHHHHHHHHHTTSCEEE---ECCSSHHHHHHHHHHHHHHGGGEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCCEEE---EEeChHHHHHHHHHHHHhhCCCEEEEEEc
Confidence 6899999999999999999989988 9999999999994332 2345566554
No 33
>2nv0_A Glutamine amidotransferase subunit PDXT; 3-layer(ABA) sandwich, rossmann fold, glutaminase; 1.73A {Bacillus subtilis} SCOP: c.23.16.1 PDB: 1r9g_A 2nv2_B*
Probab=97.99 E-value=5.2e-06 Score=66.13 Aligned_cols=56 Identities=18% Similarity=0.148 Sum_probs=38.5
Q ss_pred ceeEEeeeccccccccccccceecc----cccccccccccEEEEeecccccCChhhHHHHHHHHHHh
Q psy7151 34 ADVIKTHHNDSPLIRALREQGKVIE----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 34 ~~~V~s~H~~~~Lf~~lp~~s~vi~----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i 96 (188)
...+++.|++. ++.+|++..+.+ .++|+++ .+++|+|||||...+ ..+++||+..+
T Consensus 128 ~~~~~~~h~~~--v~~~~~~~~v~a~~d~~~~a~~~--~~~~gvQfHPE~~~~---~~l~~~fl~~~ 187 (196)
T 2nv0_A 128 PFTGVFIRAPH--ILEAGENVEVLSEHNGRIVAAKQ--GQFLGCSFHPELTED---HRVTQLFVEMV 187 (196)
T ss_dssp CEEEEEESCCE--EEEECTTCEEEEEETTEEEEEEE--TTEEEESSCTTSSSC---CHHHHHHHHHH
T ss_pred ceEEEEEecce--ecccCCCcEEEEEECCEEEEEEE--CCEEEEEECCccCCc---hHHHHHHHHHH
Confidence 33455557665 666666655443 2567765 589999999998654 48999999754
No 34
>1vco_A CTP synthetase; tetramer, riken structural genomics/proteomics initiative, RSGI, structural genomics, ligase; HET: GLN; 2.15A {Thermus thermophilus} SCOP: c.23.16.1 c.37.1.10 PDB: 1vcn_A 1vcm_A
Probab=97.99 E-value=1.7e-06 Score=80.86 Aligned_cols=39 Identities=18% Similarity=0.259 Sum_probs=34.2
Q ss_pred cccccccccccEE-EEeecccccCChh-hHHHHHHHHHHhh
Q psy7151 59 PLKDFHKDELRLY-GLQFHPEVDLTNE-GRTMLKNFLFDVC 97 (188)
Q Consensus 59 pi~Ai~~~~~~i~-GVQFHPE~~~t~~-G~~il~nFl~~i~ 97 (188)
.++|+++.+.|+| |||||||...++. |..||+||+..+.
T Consensus 504 ~VeaIe~~~~p~fvGVQFHPE~~~~p~~g~~LF~~Fv~aa~ 544 (550)
T 1vco_A 504 LVEAIELKDHPFFLGLQSHPEFKSRPMRPSPPFVGFVEAAL 544 (550)
T ss_dssp CEEEEEETTSSSEEEESSCGGGGCBTTBCCHHHHHHHHHHH
T ss_pred cEEEEEeCCCCEEEEEEeCCccCCCCCChHHHHHHHHHHHH
Confidence 4789999888988 9999999998875 9999999997643
No 35
>2e18_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, NPPSFA, national project on Pro structural and functional analyses; 2.10A {Pyrococcus horikoshii}
Probab=97.97 E-value=4.6e-06 Score=69.66 Aligned_cols=55 Identities=18% Similarity=0.243 Sum_probs=44.6
Q ss_pred CCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcC----CCCCceEEEEecCC
Q psy7151 101 GNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHP----FPGPGLAIRVICGE 159 (188)
Q Consensus 101 ~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~----~p~~~L~v~~~~~~ 159 (188)
+..+++.+++.++++||++ +.+++++ |+|||+||++++..+ .+.+.+++.|+...
T Consensus 2 ~~~~~~~~~~~l~~~i~~~-~~~~vvv---~lSGGiDSs~~~~l~~~~~g~~~v~av~~~~~~ 60 (257)
T 2e18_A 2 RILDYDKVIERILEFIREK-GNNGVVI---GISGGVDSATVAYLATKALGKEKVLGLIMPYFE 60 (257)
T ss_dssp CEECHHHHHHHHHHHHHHH-CTTCEEE---ECCSSHHHHHHHHHHHHHHCGGGEEEEECCSSC
T ss_pred CcCCHHHHHHHHHHHHHHh-CCCcEEE---EecCCHHHHHHHHHHHHhcCCCcEEEEEeCCCC
Confidence 3467889999999999999 7788888 999999999998322 23578899988654
No 36
>3p52_A NH(3)-dependent NAD(+) synthetase; structural genomics, center for structural genomics of infec diseases, NADE, CSGI; 2.74A {Campylobacter jejuni} SCOP: c.26.2.0
Probab=97.97 E-value=2.4e-06 Score=71.98 Aligned_cols=56 Identities=18% Similarity=0.235 Sum_probs=44.1
Q ss_pred cccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhc---CCCCCceEEEEecC
Q psy7151 103 FTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRH---PFPGPGLAIRVICG 158 (188)
Q Consensus 103 W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~---~~p~~~L~v~~~~~ 158 (188)
.+++...+.++.|||+++...+.-..++|+|||+||++++.. .+..+.+++.|+..
T Consensus 4 ~~~~~~~~~l~~~l~d~v~~~g~~~vvv~lSGGiDSsv~a~l~~~~~g~~v~av~~~~~ 62 (249)
T 3p52_A 4 MDWQKITEKMCDFIQEKVKNSQSQGVVLGLSGGIDSALVATLCKRALKENVFALLMPTQ 62 (249)
T ss_dssp CCHHHHHHHHHHHHHHHHHTSSCSEEEEECCSSHHHHHHHHHHHHHHTTSEEEEECCSC
T ss_pred cCHHHHHHHHHHHHHHHHHHhCCCCEEEEcCCCHHHHHHHHHHHHHcCCcEEEEEecCC
Confidence 467889999999999999875544445599999999999932 23467899998864
No 37
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=97.94 E-value=4.5e-06 Score=77.62 Aligned_cols=34 Identities=29% Similarity=0.567 Sum_probs=27.8
Q ss_pred ccccccccccEEEEeecccccCChhhHHHHHHHHHHh
Q psy7151 60 LKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 60 i~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i 96 (188)
++|++. .++||+|||||.+ .+.|.+||+||+..-
T Consensus 182 i~ai~~--~~i~GvQFHPE~s-~~~g~~l~~~Fl~~~ 215 (555)
T 1jvn_A 182 IAAVNK--NNIFATQFHPEKS-GKAGLNVIENFLKQQ 215 (555)
T ss_dssp EEEEEE--TTEEEESSBGGGS-HHHHHHHHHHHHTTC
T ss_pred EEEEEe--CCEEEEEeCcEec-ChhHHHHHHHHHhcc
Confidence 567773 5899999999975 367999999999753
No 38
>1xng_A NH(3)-dependent NAD(+) synthetase; amidotransferase, ligase; HET: DND ATP; 1.70A {Helicobacter pylori} SCOP: c.26.2.1 PDB: 1xnh_A
Probab=97.90 E-value=1.9e-06 Score=72.54 Aligned_cols=54 Identities=22% Similarity=0.201 Sum_probs=41.9
Q ss_pred CcccchHHHHHHHHHHHHhCC---CcEEEEeeccccCCChhhHhhc---CCCCCceEEEEecC
Q psy7151 102 NFTLKSREEELIKYVKETVGN---MKVLVRKLGLDLGLTPEVVMRH---PFPGPGLAIRVICG 158 (188)
Q Consensus 102 ~W~~~~~ie~iI~~IRe~Vg~---~kVi~~~~GlSGGvDSavva~~---~~p~~~L~v~~~~~ 158 (188)
+++++..++.++.+||+++.. +++++ |+|||+||++++.. +++.+.+++.|+..
T Consensus 2 ~~~~~~~~~~l~~~l~~~v~~~~~~~vvv---~lSGGiDSsv~~~l~~~~~~~~v~av~~~~~ 61 (268)
T 1xng_A 2 QKDYQKLIVYLCDFLEKEVQKRGFKKVVY---GLSGGLDSAVVGVLCQKVFKENAHALLMPSS 61 (268)
T ss_dssp -CCHHHHHHHHHHHHHHHHHHTTCCCEEE---ECCSSHHHHHHHHHHHHHHGGGEEEEECCCS
T ss_pred CCCHHHHHHHHHHHHHHHHHHhCCCCEEE---EccCcHHHHHHHHHHHHhCCCCEEEEEeCCC
Confidence 356788999999999999863 45666 99999999999832 23456889998865
No 39
>2ywd_A Glutamine amidotransferase subunit PDXT; pyridoxine biosynthesis, structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=97.86 E-value=1.3e-05 Score=63.19 Aligned_cols=44 Identities=23% Similarity=0.299 Sum_probs=31.1
Q ss_pred cccccccceecc----cccccccccccEEEEeecccccCChhhHHHHHHHHHH
Q psy7151 47 IRALREQGKVIE----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFD 95 (188)
Q Consensus 47 f~~lp~~s~vi~----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~ 95 (188)
+..+|++..+.+ .++|+++. ++||+|||||... ++ .|++||+..
T Consensus 141 v~~l~~~~~~~a~~~~~~~a~~~~--~~~gvQfHPE~~~--~~-~l~~~f~~~ 188 (191)
T 2ywd_A 141 FRRLGEGVEVLARLGDLPVLVRQG--KVLASSFHPELTE--DP-RLHRYFLEL 188 (191)
T ss_dssp EEEECTTCEEEEEETTEEEEEEET--TEEEESSCGGGSS--CC-HHHHHHHHH
T ss_pred eeccCCCcEEEEEECCEEEEEEEC--CEEEEEeCCCCCC--Cc-HHHHHHHHH
Confidence 445555544432 36788764 6999999999754 34 999999965
No 40
>1q7r_A Predicted amidotransferase; structural genomics, YAAE, PDX2, predicted glutamine amidotransferase, PSI; HET: MSE; 1.90A {Geobacillus stearothermophilus} SCOP: c.23.16.1
Probab=97.86 E-value=8e-06 Score=66.62 Aligned_cols=50 Identities=20% Similarity=0.286 Sum_probs=35.4
Q ss_pred eeccccccccccccceecc----cccccccccccEEEEeecccccCChhhHHHHHHHHHHh
Q psy7151 40 HHNDSPLIRALREQGKVIE----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 40 ~H~~~~Lf~~lp~~s~vi~----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i 96 (188)
.|++. ++.+|++..+.+ .++|+++ .+++|+|||||...+ ..+++||+..+
T Consensus 156 ~h~~~--v~~l~~~~~v~a~sdg~~ea~~~--~~i~GvQfHPE~~~~---~~l~~~fl~~~ 209 (219)
T 1q7r_A 156 IRAPH--IVEAGDGVDVLATYNDRIVAARQ--GQFLGCSFHPELTDD---HRLMQYFLNMV 209 (219)
T ss_dssp SSCCE--EEEECTTCEEEEEETTEEEEEEE--TTEEEESSCGGGSSC---CHHHHHHHHHH
T ss_pred Eecce--eeccCCCcEEEEEcCCEEEEEEE--CCEEEEEECcccCCC---HHHHHHHHHHH
Confidence 35554 556666555433 3667776 589999999999753 58999999764
No 41
>2iss_D Glutamine amidotransferase subunit PDXT; (beta/alpha)8-barrel, alpha/beta three layer sandwich, lyase transferase; HET: 5RP; 2.90A {Thermotoga maritima}
Probab=97.81 E-value=1.5e-05 Score=64.45 Aligned_cols=52 Identities=13% Similarity=0.089 Sum_probs=34.7
Q ss_pred EEeeeccccccccccccceecc----cccccccccccEEEEeecccccCChhhHHHHHHHHHH
Q psy7151 37 IKTHHNDSPLIRALREQGKVIE----PLKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFD 95 (188)
Q Consensus 37 V~s~H~~~~Lf~~lp~~s~vi~----pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~ 95 (188)
+++.|++. ++.+|++..+.+ .++|+++ .++||+|||||...++ .+++||+..
T Consensus 151 ~~~~h~~~--v~~~~~~~~v~a~~d~~~~a~~~--~~i~GvQfHPE~~~~~---~l~~~fl~~ 206 (208)
T 2iss_D 151 AIFIRAPR--IVETGKNVEILATYDYDPVLVKE--GNILACTFHPELTDDL---RLHRYFLEM 206 (208)
T ss_dssp EEESSCCE--EEEECSSCEEEEEETTEEEEEEE--TTEEEESSCGGGSSCC---HHHHHHHTT
T ss_pred EEEEeCcc--cccCCCCcEEEEEECCEEEEEEE--CCEEEEEeCCCcCCcH---HHHHHHHHH
Confidence 33345444 444555544433 3667765 4899999999997653 899999853
No 42
>3n05_A NH(3)-dependent NAD(+) synthetase; ligase, structural genomics, protein structure initiative, P nysgrc; 2.35A {Streptomyces avermitilis}
Probab=97.74 E-value=6.8e-06 Score=76.60 Aligned_cols=55 Identities=11% Similarity=0.009 Sum_probs=41.3
Q ss_pred cchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcC----CCCCceEEEEecCC
Q psy7151 105 LKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHP----FPGPGLAIRVICGE 159 (188)
Q Consensus 105 ~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~----~p~~~L~v~~~~~~ 159 (188)
.+++.+.++.+||+++...+....++|+||||||+|+|.++ .+.+.+++-|+...
T Consensus 306 ~~~~~~~~~~~l~~~~~~~g~~~vvvglSGGvDSsv~a~la~~alG~~~v~~v~m~~~~ 364 (590)
T 3n05_A 306 DEEVYSALVVGLRAYVAKNGFRSVLIGLSGGIDSALVAAIACDALGAQNVYGVSMPSKY 364 (590)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCSS
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEEEcCCCHHHHHHHHHHHHHhCcccEEEEEECCCC
Confidence 46788999999999996543222333999999999999432 34688999998643
No 43
>4f4h_A Glutamine dependent NAD+ synthetase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ligase; 1.75A {Burkholderia thailandensis}
Probab=97.53 E-value=1.8e-05 Score=73.84 Aligned_cols=53 Identities=15% Similarity=0.083 Sum_probs=43.9
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHh----hcCCCCCceEEEEecCC
Q psy7151 107 SREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVM----RHPFPGPGLAIRVICGE 159 (188)
Q Consensus 107 ~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva----~~~~p~~~L~v~~~~~~ 159 (188)
++.+.++-++|+++...+..+.++|||||+||++++ .+..+++++++.||+..
T Consensus 282 ~~~~a~~~gl~dy~~k~g~~~~vlglSGGiDSal~~~la~~alg~~~v~~v~mp~~~ 338 (565)
T 4f4h_A 282 QVYRALVLGVRDYIGKNGFPGAIIGLSGGVDSALVLAVAVDALGAERVRAVMMPSRY 338 (565)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCEEEECCSSHHHHHHHHHHHHHHCGGGEEEEECCCTT
T ss_pred HHHHHHHHHHHHHHHHcCCCcEEEecCCCccHHHHHHHHHHHhCCccEEEEeccccc
Confidence 455677889999999877777777999999999988 45568999999999844
No 44
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=97.24 E-value=0.00014 Score=59.26 Aligned_cols=32 Identities=22% Similarity=0.320 Sum_probs=25.2
Q ss_pred ccccccccccEEEEeecccccCChhhHHHHHHHHHHh
Q psy7151 60 LKDFHKDELRLYGLQFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 60 i~Ai~~~~~~i~GVQFHPE~~~t~~G~~il~nFl~~i 96 (188)
++|++. .+++|+|||||...+ .+|++||+..+
T Consensus 182 ~~a~~~--~~v~gvQfHPE~~~~---~~l~~~Fl~~~ 213 (227)
T 2abw_A 182 IAAVEQ--NNCLGTVFHPELLPH---TAFQQYFYEKV 213 (227)
T ss_dssp EEEEEE--TTEEEESSCGGGSSC---CHHHHHHHHHH
T ss_pred eEEEEE--CCEEEEEECCeeCCC---cHHHHHHHHHH
Confidence 346654 589999999999865 39999999764
No 45
>3uow_A GMP synthetase; structural genomics consortium, SGC, purine nucleotide biosy process, ligase; HET: XMP; 2.72A {Plasmodium falciparum}
Probab=96.84 E-value=0.00012 Score=68.10 Aligned_cols=89 Identities=52% Similarity=0.786 Sum_probs=52.8
Q ss_pred CeeeEeeeecCCeEEecCcccCCcceeEEeeeccccccccccccceecccccccccccccEEEEeecccccCChhhHHHH
Q psy7151 10 QTLLCQGTLRPDLIESASHLASNKADVIKTHHNDSPLIRALREQGKVIEPLKDFHKDELRLYGLQFHPEVDLTNEGRTML 89 (188)
Q Consensus 10 ~~~~~~g~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~lp~~s~vi~pi~Ai~~~~~~i~GVQFHPE~~~t~~G~~il 89 (188)
..++++||.|+|.++.... .|.+..++++|+-.++-... ...++.|+..+.+.+
T Consensus 361 ~~~la~Gt~y~D~ies~~~--~g~~~~iks~~n~~gl~~~~--~~~li~PL~~l~K~E---------------------- 414 (556)
T 3uow_A 361 KTFLLQGTLYPDIIESKCS--KNLSDTIKTHHNVGGLPKNL--KFKLFEPFKYLFKDD---------------------- 414 (556)
T ss_dssp GEEEECCCCHHHHHHHSCC---------------------C--CCEEECTTTTCCHHH----------------------
T ss_pred ccccccCccChHHHhhccc--ccccceeccccccccccccc--ccceEeecccCcHHH----------------------
Confidence 3799999999999998763 36677888766644332221 344667776544321
Q ss_pred HHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCCCCCceEEEEecCCch
Q psy7151 90 KNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRVICGEER 161 (188)
Q Consensus 90 ~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~~~~~~~ 161 (188)
| +.+|...|++..++.++|||+|+|++|+||.=++
T Consensus 415 --------------------------V-----------r~la~~lGlp~~~~~r~P~p~p~la~Ri~g~it~ 449 (556)
T 3uow_A 415 --------------------------V-----------KTLSRELNLPEEITNRHPFPGPGLAIRVIGEINK 449 (556)
T ss_dssp --------------------------H-----------HHHHHTTTCCHHHHHCCCCCTTTTTTTBCSSCCH
T ss_pred --------------------------H-----------HHHHHHcCCCHHHhCCCCCCCCCccccccCccCH
Confidence 1 4457888899999999999999999999974343
No 46
>3ilv_A Glutamine-dependent NAD(+) synthetase; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.79A {Cytophaga hutchinsonii atcc 33406}
Probab=96.80 E-value=0.0002 Score=67.50 Aligned_cols=36 Identities=8% Similarity=-0.109 Sum_probs=27.8
Q ss_pred chHHHHHHHHHHHHhCC---CcEEEEeeccccCCChhhHhhc
Q psy7151 106 KSREEELIKYVKETVGN---MKVLVRKLGLDLGLTPEVVMRH 144 (188)
Q Consensus 106 ~~~ie~iI~~IRe~Vg~---~kVi~~~~GlSGGvDSavva~~ 144 (188)
+.+...++.|||+++.. ++|++ |+||||||+|+|.+
T Consensus 284 ~~~~~~~~~~l~d~~~~~g~~~vvl---glSGGvDSsv~A~L 322 (634)
T 3ilv_A 284 FEFWEATSLGLFDYMRKSRSKGFVL---SLSGGADSSACAIM 322 (634)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCSEEE---ECCSSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCeEEE---EccCCHHHHHHHHH
Confidence 45666778999997764 45666 99999999998854
No 47
>3sdb_A Glutamine-dependent NAD(+) synthetase; glutamine-amidotransferase, glutaminase, glutamine-dependent synthetase, ligase; 2.00A {Mycobacterium tuberculosis} PDB: 3seq_A* 3sez_A* 3szg_A* 3dla_A* 3syt_A*
Probab=96.79 E-value=0.00033 Score=66.60 Aligned_cols=52 Identities=12% Similarity=0.080 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHh---hcCC------CCCceEEEEecC
Q psy7151 107 SREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVM---RHPF------PGPGLAIRVICG 158 (188)
Q Consensus 107 ~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva---~~~~------p~~~L~v~~~~~ 158 (188)
+..+.++.+||+++...+....++|+||||||+|++ +.++ +++.+|+.||+.
T Consensus 343 ~~~~~~~~~l~~~l~~~g~~~vvvglSGGvDSsvaa~l~~~a~~~lg~~~~~v~~v~m~~~ 403 (680)
T 3sdb_A 343 EAYNIQVSGLEQRLRALDYPKVVIGVSGGLDSTHALIVATHAMDREGRPRSDILAFALPGF 403 (680)
T ss_dssp HHHHHHHHHHHHHHHHTTSCEEEEECCSSHHHHHHHHHHHHHHHHTTCCGGGEEEEECCC-
T ss_pred HHHHHHHHHHHHHHHHcCCCcEEEEecCCccHHHHHHHHHHHHHHhCCCCceEEEEEECCC
Confidence 445556677777666443333334999999999754 2222 468999999974
No 48
>2vxo_A GMP synthase [glutamine-hydrolyzing]; proto-oncogene, phosphoprotein, GMP synthetase, guanine monophosphate synthetase, chromosomal rearrangement; HET: XMP; 2.5A {Homo sapiens}
Probab=96.53 E-value=0.00012 Score=70.06 Aligned_cols=122 Identities=66% Similarity=1.078 Sum_probs=82.8
Q ss_pred CCCCCCCeeeEeeeecCCeEEecCcccCCcceeEEeeeccccccccccccceecccccccccccccEEEEeecccccCCh
Q psy7151 4 LKLDPNQTLLCQGTLRPDLIESASHLASNKADVIKTHHNDSPLIRALREQGKVIEPLKDFHKDELRLYGLQFHPEVDLTN 83 (188)
Q Consensus 4 ~~~~~~~~~~~~g~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~lp~~s~vi~pi~Ai~~~~~~i~GVQFHPE~~~t~ 83 (188)
++.+.+..++++|+.++|.+++......|.+..++++|+..++...++....++.|+..+.+++
T Consensus 359 ~g~~~~~~~LatG~~~~D~iEs~~~~l~~g~~~iks~~nv~g~~~~~~~~~~~i~PL~~L~K~E---------------- 422 (697)
T 2vxo_A 359 MNLKPEEVFLAQGTLRPDLIESASLVASGKAELIKTHHNDTELIRKLREEGKVIEPLKDFHKDE---------------- 422 (697)
T ss_dssp TCCCTTSEEEECCCSSCCSBCCHHHHHHSCCCGGGSCCSSCHHHHHHHHTTCEECGGGGSCHHH----------------
T ss_pred cCCCcccEEEEEeccChhhhhhhhhhhhcCccccccccccchhhHHhccCCEEEEecccCCHHH----------------
Confidence 4555557799999999999987653333445566666666655554444455677877654321
Q ss_pred hhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCCCCCceEEEEecCCchhh
Q psy7151 84 EGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRVICGEERYI 163 (188)
Q Consensus 84 ~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~~~~~~~~~ 163 (188)
| +.+|..-|++..++.+.|+|||+|++|+.+.++...
T Consensus 423 --------------------------------V-----------r~la~~lGlP~~i~~r~Ps~gpgL~~r~~~~de~~~ 459 (697)
T 2vxo_A 423 --------------------------------V-----------RILGRELGLPEELVSRHPFPGPGLAIRVICAEEPYI 459 (697)
T ss_dssp --------------------------------H-----------HHHHHHTTCCHHHHTCCCCCTTGGGGGBCCBSSCCC
T ss_pred --------------------------------H-----------HHHHHHcCCCcceeeCCCCCCCccccCccccchhhh
Confidence 1 223556679999999999999999999877776665
Q ss_pred hhhhhhhhhHHHHHhhhhhhh
Q psy7151 164 EKDYSETQVLVKIIVEYDQMF 184 (188)
Q Consensus 164 ~~~~~~~~~~~~~~~~~~~~~ 184 (188)
..++.++..+++-..++...+
T Consensus 460 g~~Y~~ld~iL~~~~~~~~el 480 (697)
T 2vxo_A 460 CKDFPETNNILKIVADFSASV 480 (697)
T ss_dssp CTTHHHHHHHHHHHHTHHHHT
T ss_pred cCCHHHHHHHHHHHhhhHHHH
Confidence 566777777776666554444
No 49
>1wy5_A TILS, hypothetical UPF0072 protein AQ_1887; N-type ATP-ppase, structural genomics, translation, NPPSFA; 2.42A {Aquifex aeolicus} SCOP: c.26.2.5 d.229.1.1 PDB: 2e21_A* 2e89_A*
Probab=94.24 E-value=0.058 Score=46.02 Aligned_cols=35 Identities=11% Similarity=0.222 Sum_probs=26.3
Q ss_pred cchHHHHHHHHHHHH--hC-CCcEEEEeeccccCCChhhHh
Q psy7151 105 LKSREEELIKYVKET--VG-NMKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 105 ~~~~ie~iI~~IRe~--Vg-~~kVi~~~~GlSGGvDSavva 142 (188)
|..+.+.+.++|+++ +. .+++++ |+|||+||++++
T Consensus 4 ~~~~~~~~~~~i~~~~l~~~~~~vlv---a~SGG~DS~~Ll 41 (317)
T 1wy5_A 4 ESRVIRKVLALQNDEKIFSGERRVLI---AFSGGVDSVVLT 41 (317)
T ss_dssp HHHHHHHHHHHHHHHCSCSSCCEEEE---ECCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCCCEEEE---EecchHHHHHHH
Confidence 345667777888876 33 456776 999999999988
No 50
>1jgt_A Beta-lactam synthetase; asparagine synthetase, clavulanic AC AMPCPP, CEA, carboxyethylarginine, hydrolase; HET: APC CMA; 1.95A {Streptomyces clavuligerus} SCOP: c.26.2.1 d.153.1.1 PDB: 1m1z_A 1mb9_A* 1mbz_A* 1mc1_A*
Probab=92.33 E-value=0.037 Score=50.74 Aligned_cols=34 Identities=18% Similarity=0.119 Sum_probs=21.9
Q ss_pred hHHHHHHHHHHHHhC-----CCcEEEEeeccccCCChhhHhh
Q psy7151 107 SREEELIKYVKETVG-----NMKVLVRKLGLDLGLTPEVVMR 143 (188)
Q Consensus 107 ~~ie~iI~~IRe~Vg-----~~kVi~~~~GlSGGvDSavva~ 143 (188)
+.++++.+.+++.|. +..+.+ ++|||+||+++|.
T Consensus 221 ~~~~~l~~~L~~aV~~rl~sd~~vgv---~LSGGlDSS~vaa 259 (513)
T 1jgt_A 221 EAVAAVRAALEKAVAQRVTPGDTPLV---VLSGGIDSSGVAA 259 (513)
T ss_dssp HHHHHHHHHHHHHHHHHSCTTCCCEE---ECCSSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhCCCcEEE---ECCCcHHHHHHHH
Confidence 344444444444333 446666 9999999999984
No 51
>1sur_A PAPS reductase; assimilatory sulfate reduction, 3-phospho-adenylyl-sulfate reductase, oxidoreductase; 2.00A {Escherichia coli} SCOP: c.26.2.2
Probab=91.65 E-value=0.14 Score=40.79 Aligned_cols=18 Identities=11% Similarity=0.307 Sum_probs=15.1
Q ss_pred CcEEEEeeccccCCChhhHhh
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMR 143 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~ 143 (188)
+++++ +.|||+||+++..
T Consensus 45 ~~v~V---a~SGGkDS~vLL~ 62 (215)
T 1sur_A 45 GEYVL---SSSFGIQAAVSLH 62 (215)
T ss_dssp SEEEE---ECCCCTTHHHHHH
T ss_pred CCEEE---EecCCHHHHHHHH
Confidence 46666 9999999999983
No 52
>1q15_A CARA; CMPR, (2S,5S)-5-carboxymethylproline, B-LS, B-lactam synthetase, AS-B, class B asparagine synthetase, AMP-CPP; 2.30A {Pectobacterium carotovorum} SCOP: c.26.2.1 d.153.1.1 PDB: 1q19_A*
Probab=91.51 E-value=0.063 Score=48.99 Aligned_cols=28 Identities=18% Similarity=0.097 Sum_probs=18.9
Q ss_pred HHHHHhC-CCcEEEEeeccccCCChhhHhhcC
Q psy7151 115 YVKETVG-NMKVLVRKLGLDLGLTPEVVMRHP 145 (188)
Q Consensus 115 ~IRe~Vg-~~kVi~~~~GlSGGvDSavva~~~ 145 (188)
-++.+.. +..+.+ .+|||+||+++|..+
T Consensus 230 aV~~rl~sd~~v~v---~LSGGlDSs~vaala 258 (503)
T 1q15_A 230 PLEDLAPRFDTVGI---PLSGGLDSSLVTALA 258 (503)
T ss_dssp HHHHHGGGCSEEEE---ECCSSHHHHHHHHHH
T ss_pred HHHHHHhCCCcEEE---ECCCCHHHHHHHHHH
Confidence 3444332 445666 999999999998433
No 53
>3bl5_A Queuosine biosynthesis protein QUEC; PREQ1 biosynthesis, RNA modification, tRNA, hydrolase; 2.95A {Bacillus subtilis}
Probab=91.47 E-value=0.046 Score=43.16 Aligned_cols=32 Identities=9% Similarity=0.030 Sum_probs=20.8
Q ss_pred CcEEEEeeccccCCChhhHhhcCCC--CCceEEEEec
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMRHPFP--GPGLAIRVIC 157 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~~~~p--~~~L~v~~~~ 157 (188)
+++++ ++|||+||++++..+-. .+..++.+..
T Consensus 4 ~~v~v---~lSGG~DS~~ll~ll~~~~~~v~~~~~~~ 37 (219)
T 3bl5_A 4 EKAIV---VFSGGQDSTTCLLWALKEFEEVETVTFHY 37 (219)
T ss_dssp CEEEE---ECCSSHHHHHHHHHHHHHCSEEEEEEEES
T ss_pred CCEEE---EccCcHHHHHHHHHHHHcCCceEEEEEeC
Confidence 45665 99999999999833221 2355665543
No 54
>2der_A TRNA-specific 2-thiouridylase MNMA; protein-RNA complex, transferase/RNA complex; 3.10A {Escherichia coli} PDB: 2det_A 2deu_A*
Probab=91.46 E-value=0.059 Score=47.72 Aligned_cols=31 Identities=19% Similarity=0.092 Sum_probs=21.8
Q ss_pred CcEEEEeeccccCCChhhHhhcCCC--CCceEEEEe
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMRHPFP--GPGLAIRVI 156 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~~~~p--~~~L~v~~~ 156 (188)
.+|++ |+|||+||++++.++-. -.+.++.|.
T Consensus 18 ~kVvV---a~SGGvDSsv~a~lL~~~G~~V~~v~~~ 50 (380)
T 2der_A 18 KKVIV---GMSGGVDSSVSAWLLQQQGYQVEGLFMK 50 (380)
T ss_dssp CEEEE---ECCSCSTTHHHHHHHHTTCCEEEEEEEE
T ss_pred CEEEE---EEEChHHHHHHHHHHHHcCCeEEEEEEE
Confidence 45666 99999999999944332 246666664
No 55
>2pg3_A Queuosine biosynthesis protein QUEC; YP_049261.1, hypothetical protein, structural genomics, JOIN for structural genomics; 2.40A {Pectobacterium atrosepticum SCRI1043} SCOP: c.26.2.1
Probab=89.66 E-value=0.083 Score=42.60 Aligned_cols=33 Identities=12% Similarity=0.116 Sum_probs=21.2
Q ss_pred CcEEEEeeccccCCChhhHhhcCCC--CCceEEEEecC
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMRHPFP--GPGLAIRVICG 158 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~~~~p--~~~L~v~~~~~ 158 (188)
+++++ ++|||+||++++..+-. .+..++.+..+
T Consensus 3 ~kvvv---~lSGG~DS~~~l~ll~~~~~~v~av~~~~g 37 (232)
T 2pg3_A 3 KRAVV---VFSGGQDSTTCLIQALQDYDDVHCITFDYG 37 (232)
T ss_dssp CEEEE---ECCSSHHHHHHHHHHHHHCSEEEEEEEESS
T ss_pred CCEEE---EecCcHHHHHHHHHHHHcCCCEEEEEEECC
Confidence 34555 99999999998832211 34566665543
No 56
>2hma_A Probable tRNA (5-methylaminomethyl-2-thiouridylat methyltransferase; alpha-beta, beta barrel, structural genomics, PSI-2; HET: MSE SAM; 2.41A {Streptococcus pneumoniae}
Probab=89.26 E-value=0.066 Score=47.24 Aligned_cols=33 Identities=18% Similarity=0.067 Sum_probs=22.7
Q ss_pred CcEEEEeeccccCCChhhHhhcCC--CCCceEEEEecC
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMRHPF--PGPGLAIRVICG 158 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~~~~--p~~~L~v~~~~~ 158 (188)
.+|++ |+|||+||+|++.++- .-.+.++.|...
T Consensus 10 ~kVlV---a~SGGvDSsv~a~lL~~~G~~V~~v~~~~~ 44 (376)
T 2hma_A 10 TRVVV---GMSGGVDSSVTALLLKEQGYDVIGIFMKNW 44 (376)
T ss_dssp SEEEE---ECCSSHHHHHHHHHHHHTTCEEEEEEEECC
T ss_pred CeEEE---EEeCHHHHHHHHHHHHHcCCcEEEEEEECC
Confidence 45666 9999999999994332 134667776543
No 57
>3k32_A Uncharacterized protein MJ0690; predicted subunit of tRNA methyltransferase, methanocaldococcus jannaschii DSM , PSI- 2; 2.50A {Methanocaldococcus jannaschii}
Probab=87.29 E-value=0.12 Score=41.27 Aligned_cols=18 Identities=17% Similarity=0.004 Sum_probs=14.6
Q ss_pred cEEEEeeccccCCChhhHhhc
Q psy7151 124 KVLVRKLGLDLGLTPEVVMRH 144 (188)
Q Consensus 124 kVi~~~~GlSGGvDSavva~~ 144 (188)
++++ ++|||+||++++..
T Consensus 8 kv~v---~~SGG~DS~~ll~l 25 (203)
T 3k32_A 8 DVHV---LFSGGKDSSLSAVI 25 (203)
T ss_dssp EEEE---ECCCSHHHHHHHHH
T ss_pred eEEE---EEECcHHHHHHHHH
Confidence 4555 99999999999843
No 58
>2c5s_A THII, probable thiamine biosynthesis protein THII; RNA-binding protein, RNA binding protein, tRNA modification, 4-thiouridine synthase; HET: AMP; 2.5A {Bacillus anthracis} SCOP: c.26.2.6 d.308.1.1
Probab=87.02 E-value=0.14 Score=45.58 Aligned_cols=16 Identities=19% Similarity=0.127 Sum_probs=13.4
Q ss_pred eccccCCChhhHhhcC
Q psy7151 130 LGLDLGLTPEVVMRHP 145 (188)
Q Consensus 130 ~GlSGGvDSavva~~~ 145 (188)
+|+|||+||++++..+
T Consensus 192 valSGGvDS~vll~ll 207 (413)
T 2c5s_A 192 VLLSGGIDSPVAAYLT 207 (413)
T ss_dssp EECCSSSHHHHHHHHH
T ss_pred EEeCCCChHHHHHHHH
Confidence 4999999999999443
No 59
>2o8v_A Phosphoadenosine phosphosulfate reductase; disulfide crosslinked complex, oxidoreductase; 3.00A {Escherichia coli}
Probab=86.41 E-value=0.44 Score=39.25 Aligned_cols=28 Identities=7% Similarity=0.253 Sum_probs=19.0
Q ss_pred HHHHHHHHHhCCCcEEEEeeccccCCChhhHh
Q psy7151 111 ELIKYVKETVGNMKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 111 ~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva 142 (188)
++++|.-+..+ +++++ +.|||+||+|+.
T Consensus 35 ~~l~~a~~~~~-~~v~v---a~SGG~DS~vLL 62 (252)
T 2o8v_A 35 GRVAWALDNLP-GEYVL---SSSFGIQAAVSL 62 (252)
T ss_dssp HHHHHHHTTSC-SCEEE---ECCCSTTHHHHH
T ss_pred HHHHHHHHHcC-CCEEE---EeCCCHHHHHHH
Confidence 34444444443 45666 999999999998
No 60
>1gpm_A GMP synthetase, XMP aminase; class I glutamine amidotransferase, N-type ATP pyrophosphata transferase (glutamine amidotransferase); HET: AMP CIT; 2.20A {Escherichia coli} SCOP: c.23.16.1 c.26.2.1 d.52.2.1
Probab=86.32 E-value=0.088 Score=48.29 Aligned_cols=44 Identities=36% Similarity=0.735 Sum_probs=30.9
Q ss_pred ccccCCChhhHhhcCCCCCceEEEEecCCchhhhhhhhhhhhHH
Q psy7151 131 GLDLGLTPEVVMRHPFPGPGLAIRVICGEERYIEKDYSETQVLV 174 (188)
Q Consensus 131 GlSGGvDSavva~~~~p~~~L~v~~~~~~~~~~~~~~~~~~~~~ 174 (188)
+..-|++..++.++|+++|.|++|+++.-++...+...+...++
T Consensus 388 a~~lglp~~i~~~~P~~~p~La~ri~g~~t~~~l~~~~~~d~~l 431 (525)
T 1gpm_A 388 GLELGLPYDMLYRHPFPGPGLGVRVLGEVKKEYCDLLRRADAIF 431 (525)
T ss_dssp HHHTTCCHHHHTSCCCCTTGGGGTBCSSCCHHHHHHHHHHHHHH
T ss_pred HHHcCCCHHhcccCCCCchhhcccccCCcCHHHHHHHHHHHHHH
Confidence 55567999999999999999999988744444444444444443
No 61
>1ct9_A Asparagine synthetase B; amidotransferase, substrate channeling, asparagine biosynthesis, ligase; HET: AMP GLN; 2.00A {Escherichia coli} SCOP: c.26.2.1 d.153.1.1
Probab=86.08 E-value=0.38 Score=44.40 Aligned_cols=33 Identities=21% Similarity=0.180 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHhC-CCcEEEEeeccccCCChhhHh
Q psy7151 107 SREEELIKYVKETVG-NMKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 107 ~~ie~iI~~IRe~Vg-~~kVi~~~~GlSGGvDSavva 142 (188)
.+.+.+.+-++.++. +..+.+ .+|||+||+++|
T Consensus 210 ~lr~~L~~aV~~rl~sdvpvgv---~LSGGlDSS~ia 243 (553)
T 1ct9_A 210 ELRQALEDSVKSHLMSDVPYGV---LLSGGLDSSIIS 243 (553)
T ss_dssp HHHHHHHHHHHHHTCCSSCEEE---ECCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCCCceEE---eCCCCccHHHHH
Confidence 344444555666554 345665 899999999998
No 62
>1vl2_A Argininosuccinate synthase; TM1780, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics, ligase; 1.65A {Thermotoga maritima} SCOP: c.26.2.1 d.210.1.1
Probab=85.35 E-value=0.17 Score=45.73 Aligned_cols=32 Identities=19% Similarity=0.155 Sum_probs=21.1
Q ss_pred CCcEEEEeeccccCCChhhHhhcCCC--CCceEEEEe
Q psy7151 122 NMKVLVRKLGLDLGLTPEVVMRHPFP--GPGLAIRVI 156 (188)
Q Consensus 122 ~~kVi~~~~GlSGGvDSavva~~~~p--~~~L~v~~~ 156 (188)
..+|++ ++|||+||+|++..+-. ..++|+-+-
T Consensus 14 ~~KVVV---A~SGGlDSSv~a~~Lke~G~eViavt~d 47 (421)
T 1vl2_A 14 KEKVVL---AYSGGLDTSVILKWLCEKGFDVIAYVAN 47 (421)
T ss_dssp CCEEEE---ECCSSHHHHHHHHHHHHTTCEEEEEEEE
T ss_pred cCCEEE---EeCCcHHHHHHHHHHHHCCCeEEEEEEE
Confidence 345666 99999999999954322 234555543
No 63
>1ni5_A Putative cell cycle protein MESJ; structural genomics, ATPase, PP-type, putative cell cycle PR PSI, protein structure initiative; 2.65A {Escherichia coli} SCOP: b.153.1.2 c.26.2.5 d.229.1.1
Probab=84.25 E-value=0.4 Score=42.82 Aligned_cols=26 Identities=19% Similarity=0.353 Sum_probs=18.9
Q ss_pred HHHHHhCC-CcEEEEeeccccCCChhhHhh
Q psy7151 115 YVKETVGN-MKVLVRKLGLDLGLTPEVVMR 143 (188)
Q Consensus 115 ~IRe~Vg~-~kVi~~~~GlSGGvDSavva~ 143 (188)
.+++.+.. +++++ |+|||+||++++.
T Consensus 5 ~l~~~l~~~~~vlV---a~SGG~DS~~Ll~ 31 (433)
T 1ni5_A 5 TLNRQLLTSRQILV---AFSGGLDSTVLLH 31 (433)
T ss_dssp HHHHHHTTCSEEEE---ECCSBHHHHHHHH
T ss_pred hHHHhcCCCCEEEE---EEcchHHHHHHHH
Confidence 34555553 45666 9999999999883
No 64
>2ywb_A GMP synthase [glutamine-hydrolyzing]; GMP synthetase, XMP binding, ATP binding, purine nucleotide biosynthetic pathway, structural genomics; 2.10A {Thermus thermophilus} PDB: 2ywc_A*
Probab=84.20 E-value=0.16 Score=46.23 Aligned_cols=43 Identities=37% Similarity=0.604 Sum_probs=30.0
Q ss_pred ccccCCChhhHhhcCCCCCceEEEEecCCchhhhhhhhhhhhH
Q psy7151 131 GLDLGLTPEVVMRHPFPGPGLAIRVICGEERYIEKDYSETQVL 173 (188)
Q Consensus 131 GlSGGvDSavva~~~~p~~~L~v~~~~~~~~~~~~~~~~~~~~ 173 (188)
+..-|++...+.++|||+++|++|+|+.-+....+...+...+
T Consensus 366 a~~~glp~~i~~~~P~~~~~La~R~~g~~t~~~l~~~~~~d~~ 408 (503)
T 2ywb_A 366 ALLLGLPDTLRLRHPFPGPGLAVRVLGEVTEERLEILRRADDI 408 (503)
T ss_dssp HHHTTCCHHHHSCCCCCTTGGGGGBSSCCCHHHHHHHHHHHHH
T ss_pred HHHcCCChhheecCCCCCcchhhhccccccHHHHHHHHHHHHH
Confidence 4556799999999999999999999864444333333333333
No 65
>3tqi_A GMP synthase [glutamine-hydrolyzing]; ligase; 2.84A {Coxiella burnetii}
Probab=83.76 E-value=0.12 Score=47.40 Aligned_cols=30 Identities=57% Similarity=1.175 Sum_probs=25.5
Q ss_pred ccccCCChhhHhhcCCCCCceEEEEecCCc
Q psy7151 131 GLDLGLTPEVVMRHPFPGPGLAIRVICGEE 160 (188)
Q Consensus 131 GlSGGvDSavva~~~~p~~~L~v~~~~~~~ 160 (188)
+..-|++..++.++|||+++|+.|+|+.-+
T Consensus 390 a~~lGlp~~~v~~~P~p~~~l~~R~~g~vt 419 (527)
T 3tqi_A 390 GLELGLPADLIYRHPFPGPGLAIRILGEVS 419 (527)
T ss_dssp HHHHTCCHHHHTCCCCCTTGGGSSBCSCCC
T ss_pred HHHcCCChhhhccCCCCCCCcceecCCccC
Confidence 556689999999999999999999997333
No 66
>3a2k_A TRNA(Ile)-lysidine synthase; ligase, pseudo-knot, ligase/RNA complex; 3.65A {Geobacillus kaustophilus}
Probab=83.50 E-value=0.5 Score=42.45 Aligned_cols=29 Identities=14% Similarity=0.354 Sum_probs=20.0
Q ss_pred HHHHHHHH--hC-CCcEEEEeeccccCCChhhHhh
Q psy7151 112 LIKYVKET--VG-NMKVLVRKLGLDLGLTPEVVMR 143 (188)
Q Consensus 112 iI~~IRe~--Vg-~~kVi~~~~GlSGGvDSavva~ 143 (188)
..+.|++. +. .+++++ |+|||+||++++.
T Consensus 5 v~~~i~~~~l~~~~~~vlV---a~SGG~DS~~Ll~ 36 (464)
T 3a2k_A 5 VRAFIHRHQLLSEGAAVIV---GVSGGPDSLALLH 36 (464)
T ss_dssp HHHHHHHTCSSSCSSBEEE---ECCSSHHHHHHHH
T ss_pred HHHHHHHcCCCCCCCEEEE---EEcCcHHHHHHHH
Confidence 34445553 33 456777 9999999999883
No 67
>2vdj_A Homoserine O-succinyltransferase; methionine biosynthesis, amino-acid biosynthesis, homoserine transacetylase, homoserine transsuccinylase; 2.00A {Bacillus cereus} PDB: 2ghr_A
Probab=82.36 E-value=0.42 Score=41.17 Aligned_cols=23 Identities=17% Similarity=-0.136 Sum_probs=17.7
Q ss_pred cccccccccccEEEEeecccccC
Q psy7151 59 PLKDFHKDELRLYGLQFHPEVDL 81 (188)
Q Consensus 59 pi~Ai~~~~~~i~GVQFHPE~~~ 81 (188)
+..++...+.+++|+|||||-..
T Consensus 218 ~~~~~~~~~~~~~~vQgHpEyd~ 240 (301)
T 2vdj_A 218 GVHLVIGQEGRQVFALGHSEYSC 240 (301)
T ss_dssp EEEEEEEGGGTEEEECSCTTCCT
T ss_pred cceEEEecCCCEEEEECCCCCCH
Confidence 35566665668999999999864
No 68
>2h2w_A Homoserine O-succinyltransferase; TM0881, (EC 2.3.1.46), HOM O-transsuccinylase, HTS, (TM0881), structural genomics; 2.52A {Thermotoga maritima}
Probab=81.76 E-value=0.48 Score=41.10 Aligned_cols=23 Identities=22% Similarity=0.083 Sum_probs=17.8
Q ss_pred cccccccccccEEEEeecccccC
Q psy7151 59 PLKDFHKDELRLYGLQFHPEVDL 81 (188)
Q Consensus 59 pi~Ai~~~~~~i~GVQFHPE~~~ 81 (188)
+..++...+.+++|+|||||-..
T Consensus 229 ~~q~~~~~~~~~~~vQgHPEyd~ 251 (312)
T 2h2w_A 229 GVYVVANKSERQIFVTGHPEYDR 251 (312)
T ss_dssp EEEEEECSSSSEEEECSCTTCCT
T ss_pred cceEEEecCCCEEEEECCCCCCH
Confidence 45566665668999999999854
No 69
>2oq2_A Phosphoadenosine phosphosulfate reductase; sulfate reduction, PAPS reductase, oxidoreductase; HET: A3P; 2.10A {Saccharomyces cerevisiae}
Probab=79.42 E-value=1.2 Score=36.84 Aligned_cols=27 Identities=26% Similarity=0.333 Sum_probs=19.2
Q ss_pred HHHHHHHHHhCCCcEEEEeeccccCCChhhHh
Q psy7151 111 ELIKYVKETVGNMKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 111 ~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva 142 (188)
++++|+-+..+ ++++ +.|||.||+|+.
T Consensus 32 ~~l~~a~~~~~--~v~v---a~SGGkDS~vLL 58 (261)
T 2oq2_A 32 EIIAWSIVTFP--HLFQ---TTAFGLTGLVTI 58 (261)
T ss_dssp HHHHHHHHHCS--SEEE---ECCCCHHHHHHH
T ss_pred HHHHHHHHHCC--CEEE---EecCCHHHHHHH
Confidence 44555444453 5655 999999999988
No 70
>1k92_A Argininosuccinate synthase, argininosuccinate SY; N-type ATP pyrophosphatase, ligase; 1.60A {Escherichia coli} SCOP: c.26.2.1 d.210.1.1 PDB: 1k97_A* 1kp2_A* 1kp3_A*
Probab=78.15 E-value=0.58 Score=42.66 Aligned_cols=20 Identities=10% Similarity=0.179 Sum_probs=16.1
Q ss_pred CcEEEEeeccccCCChhhHhhcC
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMRHP 145 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~~~ 145 (188)
++|++ ++|||+||++++..+
T Consensus 11 ~KVvV---A~SGGlDSSvll~~L 30 (455)
T 1k92_A 11 QRIGI---AFSGGLDTSAALLWM 30 (455)
T ss_dssp SEEEE---ECCSSHHHHHHHHHH
T ss_pred CeEEE---EEcChHHHHHHHHHH
Confidence 46666 999999999999433
No 71
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=77.28 E-value=0.53 Score=39.27 Aligned_cols=18 Identities=17% Similarity=0.054 Sum_probs=14.9
Q ss_pred cEEEEeeccccCCChhhHhhc
Q psy7151 124 KVLVRKLGLDLGLTPEVVMRH 144 (188)
Q Consensus 124 kVi~~~~GlSGGvDSavva~~ 144 (188)
++++ .+|||+||++++.+
T Consensus 6 Kvvv---l~SGGkDSs~al~~ 23 (237)
T 3rjz_A 6 DVAV---LYSGGKDSNYALYW 23 (237)
T ss_dssp EEEE---ECCSSHHHHHHHHH
T ss_pred EEEE---EecCcHHHHHHHHH
Confidence 5665 99999999999843
No 72
>1kor_A Argininosuccinate synthetase; ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: ANP ARG; 1.95A {Thermus thermophilus} SCOP: c.26.2.1 d.210.1.1 PDB: 1j1z_A* 1j21_A* 1kh1_A 1kh2_A* 1kh3_A* 1j20_A*
Probab=76.78 E-value=0.61 Score=41.51 Aligned_cols=29 Identities=14% Similarity=0.141 Sum_probs=18.6
Q ss_pred eeccccCCChhhHhhcCC---CCCceEEEEec
Q psy7151 129 KLGLDLGLTPEVVMRHPF---PGPGLAIRVIC 157 (188)
Q Consensus 129 ~~GlSGGvDSavva~~~~---p~~~L~v~~~~ 157 (188)
++++|||+||++++..+- .-...++.+..
T Consensus 4 vva~SGG~DSsvll~ll~~~~g~~V~av~vd~ 35 (400)
T 1kor_A 4 VLAYSGGLDTSIILKWLKETYRAEVIAFTADI 35 (400)
T ss_dssp EEECCSSHHHHHHHHHHHHHHTCEEEEEEEES
T ss_pred EEEEeChHHHHHHHHHHHHhhCCcEEEEEEeC
Confidence 349999999999984322 22345555543
No 73
>2nz2_A Argininosuccinate synthase; amino-acid biosynthesis, aspartate, citrulline, ST genomics, structural genomics consortium, SGC, ligase; HET: CIR; 2.40A {Homo sapiens}
Probab=76.67 E-value=0.57 Score=41.95 Aligned_cols=32 Identities=13% Similarity=-0.012 Sum_probs=20.1
Q ss_pred CcEEEEeeccccCCChhhHhhcCCC--CCceEEEEec
Q psy7151 123 MKVLVRKLGLDLGLTPEVVMRHPFP--GPGLAIRVIC 157 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva~~~~p--~~~L~v~~~~ 157 (188)
++|++ ++|||+||++++..+-. -.+.++.+..
T Consensus 6 ~kVvv---alSGGlDSsvll~lL~e~G~eV~av~vd~ 39 (413)
T 2nz2_A 6 GSVVL---AYSGGLDTSCILVWLKEQGYDVIAYLANI 39 (413)
T ss_dssp EEEEE---ECCSSHHHHHHHHHHHHTTEEEEEEEEES
T ss_pred CeEEE---EEcChHHHHHHHHHHHHcCCEEEEEEEEC
Confidence 45555 99999999999843322 1344555443
No 74
>1zun_A Sulfate adenylyltransferase subunit 2; beta barrel, switch domain, heterodimer, pyrophosphate, G protein; HET: GDP AGS; 2.70A {Pseudomonas syringae} SCOP: c.26.2.2
Probab=76.50 E-value=1.2 Score=38.44 Aligned_cols=33 Identities=18% Similarity=0.293 Sum_probs=22.6
Q ss_pred hHHHHHHHHHHHHhCC-CcEEEEeeccccCCChhhHh
Q psy7151 107 SREEELIKYVKETVGN-MKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 107 ~~ie~iI~~IRe~Vg~-~kVi~~~~GlSGGvDSavva 142 (188)
.+..+.++.||+.+.+ +++++ +.|||.||+|+.
T Consensus 30 ~le~~a~~ilr~~~~~~~~ivV---a~SGGkDS~vLL 63 (325)
T 1zun_A 30 QLEAESIHIIREVAAEFDNPVM---LYSIGKDSAVML 63 (325)
T ss_dssp HHHHHHHHHHHHHHHHCSSEEE---ECCSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCEEE---EEcChHHHHHHH
Confidence 3444555666665553 35655 999999999987
No 75
>2wsi_A FAD synthetase; transferase, nucleotidyltransferase, nucleotide-binding; HET: FAD; 1.90A {Saccharomyces cerevisiae}
Probab=71.00 E-value=1.1 Score=38.11 Aligned_cols=17 Identities=12% Similarity=0.161 Sum_probs=14.5
Q ss_pred CcEEEEeeccccCCChhhHh
Q psy7151 123 MKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 123 ~kVi~~~~GlSGGvDSavva 142 (188)
+++++ +.|||.||+|+.
T Consensus 54 ~~i~v---afSGGKDS~VLL 70 (306)
T 2wsi_A 54 GEISF---SYNGGKDCQVLL 70 (306)
T ss_dssp SSEEE---ECCSCHHHHHHH
T ss_pred CCEEE---EecCCHHHHHHH
Confidence 45666 999999999988
No 76
>2dpl_A GMP synthetase, GMP synthase [glutamine-hydrolyzing] subunit B; pyrococcus horikoshii OT3, structural genomics, NPPSFA; 1.43A {Pyrococcus horikoshii} PDB: 2z0c_A 3a4i_A
Probab=67.80 E-value=1.4 Score=37.39 Aligned_cols=27 Identities=56% Similarity=0.926 Sum_probs=22.9
Q ss_pred ccccCCChhhHhhcCCCCCceEEEEec
Q psy7151 131 GLDLGLTPEVVMRHPFPGPGLAIRVIC 157 (188)
Q Consensus 131 GlSGGvDSavva~~~~p~~~L~v~~~~ 157 (188)
+..-|++..++.++|||+++|++|+++
T Consensus 173 a~~~glp~~i~~~~P~~~~~La~R~~g 199 (308)
T 2dpl_A 173 AKFLGLPEKIYNRMPFPGPGLAVRVIG 199 (308)
T ss_dssp HHHTTCCHHHHTCCCCCTTGGGGGBSS
T ss_pred HHHhCCCceeeecCCCCcccccccccC
Confidence 445578888899999999999999875
No 77
>1vbk_A Hypothetical protein PH1313; structural genomics, riken structural genomics/proteomics initiative, RSGI, NPPSFA; 1.90A {Pyrococcus horikoshii} SCOP: c.26.2.6 d.308.1.1
Probab=54.83 E-value=3.2 Score=35.37 Aligned_cols=14 Identities=7% Similarity=-0.304 Sum_probs=11.9
Q ss_pred eccccCCChhhHhhc
Q psy7151 130 LGLDLGLTPEVVMRH 144 (188)
Q Consensus 130 ~GlSGGvDSavva~~ 144 (188)
+++|| +||+|++..
T Consensus 184 vllSG-vDS~vaa~l 197 (307)
T 1vbk_A 184 GILHD-ELSALAIFL 197 (307)
T ss_dssp EECSS-HHHHHHHHH
T ss_pred EEEeC-CcHHHHHHH
Confidence 39999 999999943
No 78
>2goy_A Adenosine phosphosulfate reductase; iron sulfur cluster, nucleotide binding, thiosulfonate intermediate, oxidoreductase; HET: ADX; 2.70A {Pseudomonas aeruginosa}
Probab=52.44 E-value=11 Score=31.11 Aligned_cols=27 Identities=19% Similarity=0.383 Sum_probs=18.1
Q ss_pred HHHHHHHHHhCCCcEEEEeeccccCCChhhHh
Q psy7151 111 ELIKYVKETVGNMKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 111 ~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva 142 (188)
++++|+-+..+ +++++ +.| |+||+|+.
T Consensus 44 ~~l~~a~~~~g-~~i~V---a~S-GkDS~vLL 70 (275)
T 2goy_A 44 DILKAAFEHFG-DELWI---SFS-GAEDVVLV 70 (275)
T ss_dssp HHHHHHHHHHS-TTEEE---ECC-SSTTHHHH
T ss_pred HHHHHHHHHcC-CCEEE---Eee-cHHHHHHH
Confidence 34444444444 45666 999 99999988
No 79
>3s6o_A Polysaccharide deacetylase family protein; ssgcid, NIH, structural genomics, seattle structural genomic for infectious disease; 1.85A {Burkholderia pseudomallei} SCOP: c.6.2.6
Probab=49.27 E-value=30 Score=29.25 Aligned_cols=51 Identities=12% Similarity=0.100 Sum_probs=39.6
Q ss_pred cEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHHhC
Q psy7151 69 RLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKETVG 121 (188)
Q Consensus 69 ~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg 121 (188)
.++.+-+||+....+.-...|+.||..++.-+.-|=.. ..++.+|.+++..
T Consensus 260 ~~~~i~lH~~~~g~p~r~~~le~fL~~i~~~~~Vw~~t--~~eia~~~~~~~p 310 (321)
T 3s6o_A 260 KMMSIGMHCRLLGRPGRFRALQRFLDHIERHDRVWVAR--RVEIARHWREHHP 310 (321)
T ss_dssp EEEEEEEETTTTTSHHHHHHHHHHHHHHHTCSSEEECC--HHHHHHHHHHHSC
T ss_pred ceEEEEeChHHcCCHHHHHHHHHHHHHHHhCCCEEEEc--HHHHHHHHHhhCC
Confidence 38999999999877767899999999999876666332 2366777777664
No 80
>3qbu_A Putative uncharacterized protein; metallo enzyme, peptidoglycan, TIM barrel, deacetylase, HYDR; 2.57A {Helicobacter pylori}
Probab=46.89 E-value=26 Score=29.52 Aligned_cols=52 Identities=12% Similarity=0.139 Sum_probs=39.4
Q ss_pred ccEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHHhC
Q psy7151 68 LRLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKETVG 121 (188)
Q Consensus 68 ~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg 121 (188)
..++++-+||+....+.-...|+.||..+++-+.-|=.. ..++.+|.|++..
T Consensus 272 ~~~~~i~lH~~~~g~p~r~~~le~fl~~i~~~~~Vw~~t--~~eia~~~~~~~p 323 (326)
T 3qbu_A 272 YAVFSMTIHPDVSARPQVLLMHEKIIEHINKHEGVRWVT--FNEIADDFLKRNP 323 (326)
T ss_dssp EEEEEEEECHHHHTSHHHHHHHHHHHHHHTTSTTEEECC--HHHHHHHHHHHSC
T ss_pred CCeEEEEECccccCCHHHHHHHHHHHHHHHhCCCEEEEc--HHHHHHHHHhhCC
Confidence 478999999999876666899999999998866655322 2366777777654
No 81
>2lyd_A Decapping protein 1; DCP1, XRN1, transcription-protein binding complex; NMR {Drosophila melanogaster}
Probab=42.16 E-value=22 Score=26.97 Aligned_cols=66 Identities=9% Similarity=0.159 Sum_probs=38.4
Q ss_pred eeeEeeeecCCeEEecCcccCCcceeEEeeeccccccccccccce--ecccccccccccccEEEEeeccccc
Q psy7151 11 TLLCQGTLRPDLIESASHLASNKADVIKTHHNDSPLIRALREQGK--VIEPLKDFHKDELRLYGLQFHPEVD 80 (188)
Q Consensus 11 ~~~~~g~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~lp~~s~--vi~pi~Ai~~~~~~i~GVQFHPE~~ 80 (188)
..-+||++| ..+|...|.||-. ..|. -+-..+...+..... +..++.-+++.+..+||+-||.+.-
T Consensus 52 K~~iEG~LF--v~~R~~~P~~~~i-vLNR-~~~~n~~~~l~~~~~~e~~~~~li~r~~~~~I~GiWf~~~~d 119 (134)
T 2lyd_A 52 KTDVEGAFF--IYHRNAEPFHSIF-INNR-LNTTSFVEPITGSLELQSQPPFLLYRNERSRIRGFWFYNSEE 119 (134)
T ss_dssp EEEEEEEEE--EEECSSSSSEEEE-EEET-TTTEEEEEECCSSCEEEEETTEEEEEEGGGEEEEEEESSHHH
T ss_pred EcCCcceEE--EEEccCCCceEEE-EEcC-CCCcceeEEcCCCcEEEeeCCEEEEECCCCcEEEEEecChHH
Confidence 356899998 6777888877621 1211 111223344433322 2334555666667899999998764
No 82
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=34.59 E-value=67 Score=25.03 Aligned_cols=62 Identities=10% Similarity=0.083 Sum_probs=36.4
Q ss_pred HHHHHHHhCCCcEEEEeeccccCCChhhHh-----hcCCCCCceEEEEecCC--chhhhhhhhhhhhHHH
Q psy7151 113 IKYVKETVGNMKVLVRKLGLDLGLTPEVVM-----RHPFPGPGLAIRVICGE--ERYIEKDYSETQVLVK 175 (188)
Q Consensus 113 I~~IRe~Vg~~kVi~~~~GlSGGvDSavva-----~~~~p~~~L~v~~~~~~--~~~~~~~~~~~~~~~~ 175 (188)
-+.|++.+.+ +..-.++|...|+|...+- +..+|+=.|.+.+|+.+ ..+...+-.....++.
T Consensus 33 ~~~l~~l~~~-G~~~~isgga~G~D~~aae~vl~lk~~y~~i~L~~v~Pf~~~~~~w~~~~~~~y~~ll~ 101 (181)
T 2nx2_A 33 KNRLIAFLDE-GLEWILISGQLGVELWAAEAAYDLQEEYPDLKVAVITPFYEQEKNWKEPNKEQYEAVLA 101 (181)
T ss_dssp HHHHHHHHTT-TCCEEEECCCTTHHHHHHHHHHTTTTTCTTCEEEEEESSBCTTTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHhC-CCcEEEECCCccHHHHHHHHHHHhccccCCceEEEEecccchhhCCCHHHHHHHHHHHH
Confidence 3445554433 4344455999999987655 34567888999999844 2333333333444443
No 83
>2btq_B Tubulin btubb; structural protein, cytoskeletal protein/complex, bacterial tubulin, cytoskeleton, polymerization, verrucomicrobia; HET: GDP; 3.2A {Prosthecobacter dejongeii}
Probab=32.23 E-value=21 Score=31.80 Aligned_cols=59 Identities=10% Similarity=0.109 Sum_probs=37.3
Q ss_pred EEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccc------hHHHHHHHHHHHHhCCCc---EEEEeeccccCCChhh
Q psy7151 70 LYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLK------SREEELIKYVKETVGNMK---VLVRKLGLDLGLTPEV 140 (188)
Q Consensus 70 i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~------~~ie~iI~~IRe~Vg~~k---Vi~~~~GlSGGvDSav 140 (188)
-|+-.|||+...+.. .++..||... +..++..+.||+.+++.. .+-..-|+.||-=|-.
T Consensus 81 ~~~~lf~p~~i~~g~------------~gAgnn~a~G~~~~G~~~~e~~~d~Ir~~~e~cD~lqgf~i~~s~gGGTGSG~ 148 (426)
T 2btq_B 81 DMSQLFDESSIVRKI------------PGAANNWARGYNVEGEKVIDQIMNVIDSAVEKTKGLQGFLMTHSIGGGSGSGL 148 (426)
T ss_dssp ---CCCCTTSEEECC------------SCCTTCHHHHHTHHHHHHHHHHHHHHHHHHTTCSSEEEEEEEEESSSSTTTHH
T ss_pred ccccccCcccccccc------------cCccCcccccccchhHHHHHHHHHHHHHHHhcCCCcceEEEEEecCCCccccH
Confidence 356789999975321 1566777543 478888999999998542 1333448888765433
No 84
>3rxz_A Polysaccharide deacetylase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, carbohydrate esterase family 4; 2.01A {Mycobacterium smegmatis}
Probab=30.80 E-value=49 Score=27.17 Aligned_cols=50 Identities=16% Similarity=0.277 Sum_probs=36.7
Q ss_pred ccEEEEeecccccCChhhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHH
Q psy7151 68 LRLYGLQFHPEVDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKET 119 (188)
Q Consensus 68 ~~i~GVQFHPE~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~ 119 (188)
..++++-+||+....+.-...|+.||..+++-+.-|=.. ..++.+|++++
T Consensus 234 g~~~~i~~H~~~~g~p~~~~~l~~~l~~~~~~~~V~~~t--~~eia~~~~~~ 283 (300)
T 3rxz_A 234 GGAWVLTNHPFLSGRPGRAAALREFIAEVCAMDDVWVAG--MSQIAEHVRAQ 283 (300)
T ss_dssp TCEEEEEECHHHHTSHHHHHHHHHHHHHHHTCTTEEECC--HHHHHHHHHHT
T ss_pred CCeEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCEEEEc--HHHHHHHHHhh
Confidence 478999999988876666899999999999865545221 23556666664
No 85
>1tzy_B Histone H2B; histone-fold, tetramer-dimer-dimer, DNA binding protein; 1.90A {Gallus gallus} SCOP: a.22.1.1 PDB: 1eqz_B 1hq3_B 2aro_B 2hio_B 3c9k_B 3azg_D 3a6n_D 3an2_D 3av1_D 3av2_D 3ayw_D 3aze_D 3azf_D 3afa_D 3azh_D 3azi_D 3azj_D 3azk_D 3azl_D 3azm_D ...
Probab=27.20 E-value=25 Score=26.65 Aligned_cols=23 Identities=22% Similarity=0.635 Sum_probs=20.2
Q ss_pred eecccccCChhhHHHHHHHHHHh
Q psy7151 74 QFHPEVDLTNEGRTMLKNFLFDV 96 (188)
Q Consensus 74 QFHPE~~~t~~G~~il~nFl~~i 96 (188)
|-||+...+.....|+..|+.+|
T Consensus 48 QVhpd~gISskAm~ImnSfvnDi 70 (126)
T 1tzy_B 48 QVHPDTGISSKAMGIMNSFVNDI 70 (126)
T ss_dssp HHCTTCEECHHHHHHHHHHHHHH
T ss_pred HhCCCCCcCHHHHHHHHHHHHHH
Confidence 78999888999999999998765
No 86
>2nqb_D Histone H2B; nucleosome, NCP, chromatin, structural protein/DNA complex; 2.30A {Drosophila melanogaster} PDB: 2pyo_D*
Probab=27.19 E-value=25 Score=26.54 Aligned_cols=24 Identities=21% Similarity=0.634 Sum_probs=20.3
Q ss_pred eecccccCChhhHHHHHHHHHHhh
Q psy7151 74 QFHPEVDLTNEGRTMLKNFLFDVC 97 (188)
Q Consensus 74 QFHPE~~~t~~G~~il~nFl~~i~ 97 (188)
|-||+...+.....|+..|+.+|.
T Consensus 45 QVhpd~gISskAm~ImnSfvnDif 68 (123)
T 2nqb_D 45 QVHPDTGISSKAMSIMNSFVNDIF 68 (123)
T ss_dssp HHCTTCEECHHHHHHHHHHHHHHH
T ss_pred HhCCCCCcCHHHHHHHHHHHHHHH
Confidence 789998889999999999987653
No 87
>2qkl_A DCP1 protein, SPBC3B9.21 protein; protein-protein complex, hydrolase; 2.33A {Schizosaccharomyces pombe} PDB: 2qkm_A*
Probab=26.74 E-value=67 Score=23.98 Aligned_cols=64 Identities=11% Similarity=0.187 Sum_probs=37.2
Q ss_pred eeEeeeecCCeEEecCcccCCcceeEEeeeccccccccccccc--eecccccccccccccEEEEeeccccc
Q psy7151 12 LLCQGTLRPDLIESASHLASNKADVIKTHHNDSPLIRALREQG--KVIEPLKDFHKDELRLYGLQFHPEVD 80 (188)
Q Consensus 12 ~~~~g~~~g~~I~~~~~~~HGk~~~V~s~H~~~~Lf~~lp~~s--~vi~pi~Ai~~~~~~i~GVQFHPE~~ 80 (188)
.-+||++| ...+. .|.||-. ..|. -+-..+...|.+.. .+..|+.-+++....+||+=||-+.-
T Consensus 48 ~~iEGtLF--v~~R~-~P~~~~i-VlNR-~~~~n~~~~i~~~~~~e~~~~~l~~r~~~~~i~GiWf~~~~d 113 (127)
T 2qkl_A 48 TSIEGTFF--LVKDQ-RARVGYV-ILNR-NSPENLYLFINHPSNVHLVDRYLIHRTENQHVVGLWMFDPND 113 (127)
T ss_dssp EEEEEEEE--EEEET-TCCEEEE-EEES-SSSCCEEEEECSGGGEEEETTEEEEEETTTEEEEEEESSTHH
T ss_pred cCcEEEEE--EEEcc-CCceEEE-EEcC-CCCcCeeEecCCCceEEEeCCEEEEEcCCCcEEEEEEEchHH
Confidence 56899999 66666 7777622 1221 12222334443332 22335555666667999999998764
No 88
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=25.55 E-value=36 Score=30.15 Aligned_cols=50 Identities=14% Similarity=0.081 Sum_probs=33.2
Q ss_pred ccCChhhHHHHHHHHHHhhCCCCCcccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCCCCCceEEE
Q psy7151 79 VDLTNEGRTMLKNFLFDVCGLTGNFTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIR 154 (188)
Q Consensus 79 ~~~t~~G~~il~nFl~~i~~~~~~W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~ 154 (188)
+..|++|+++.+.|...++...-. .+.|+.-|||++---.+.-.+ .++|.
T Consensus 136 R~~s~yG~~~a~~l~~~La~~g~~-------------------------VVSGlA~GID~~AH~~AL~~g-TIaVL 185 (382)
T 3maj_A 136 RNASGAGLKFAGQLAADLGAAGFV-------------------------VISGLARGIDQAAHRASLSSG-TVAVL 185 (382)
T ss_dssp SSCCHHHHHHHHHHHHHHHHHTCE-------------------------EEECCCTTHHHHHHHHHTTTC-EEEEC
T ss_pred CCCCHHHHHHHHHHHHHHHHCCcE-------------------------EEeCCccCHHHHHHHHHHhCC-eEEEE
Confidence 346788999999988777643221 566999999987665433334 55553
No 89
>3oow_A Phosphoribosylaminoimidazole carboxylase,catalyic; structural genomics, center for structural genomics of infec diseases, csgid; HET: MSE; 1.75A {Francisella tularensis subsp} SCOP: c.23.8.1 PDB: 3opq_A*
Probab=25.29 E-value=74 Score=25.07 Aligned_cols=43 Identities=19% Similarity=0.359 Sum_probs=30.9
Q ss_pred HHHHHHHHHHhC-CCcEEEEeeccccCCChhhHhhcCCCCCceEEE
Q psy7151 110 EELIKYVKETVG-NMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIR 154 (188)
Q Consensus 110 e~iI~~IRe~Vg-~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~ 154 (188)
+++.+++++.-+ ..+|+..+-|.++++++.+.+....| ++||=
T Consensus 47 ~~l~~~~~~~~~~g~~ViIa~AG~aa~LpgvvA~~t~~P--VIgVP 90 (166)
T 3oow_A 47 DKMFDYAETAKERGLKVIIAGAGGAAHLPGMVAAKTTLP--VLGVP 90 (166)
T ss_dssp HHHHHHHHHTTTTTCCEEEEEECSSCCHHHHHHHTCSSC--EEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEECCcchhhHHHHHhccCCC--EEEee
Confidence 444555555433 24788888899999999999987666 77774
No 90
>3rg8_A Phosphoribosylaminoimidazole carboxylase, PURE PR; purine biosynthesis, lyase; 1.74A {Treponema denticola} SCOP: c.23.8.0 PDB: 3rgg_A*
Probab=23.44 E-value=68 Score=25.07 Aligned_cols=42 Identities=19% Similarity=0.068 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhC--CCcEEEEeeccccCCChhhHhhcCCCCCceEE
Q psy7151 110 EELIKYVKETVG--NMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAI 153 (188)
Q Consensus 110 e~iI~~IRe~Vg--~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v 153 (188)
+++.+++++.-+ ..+|+..+-|.++.+++.+.+....| ++||
T Consensus 44 ~~~~~~~~~a~~~~~~~ViIa~AG~aa~LpgvvA~~t~~P--VIgV 87 (159)
T 3rg8_A 44 EHVVSMLKEYEALDRPKLYITIAGRSNALSGFVDGFVKGA--TIAC 87 (159)
T ss_dssp HHHHHHHHHHHTSCSCEEEEEECCSSCCHHHHHHHHSSSC--EEEC
T ss_pred HHHHHHHHHhhhcCCCcEEEEECCchhhhHHHHHhccCCC--EEEe
Confidence 444555555444 35888888899999999999987666 6666
No 91
>3kuu_A Phosphoribosylaminoimidazole carboxylase catalyti PURE; 3-layer (ABA) sandwich, rossmann fold, csgid, lyase, structu genomics; 1.41A {Yersinia pestis} SCOP: c.23.8.1 PDB: 1d7a_A* 1qcz_A 2ate_A* 2nsl_A* 2nsh_A* 2nsj_A*
Probab=23.33 E-value=83 Score=24.97 Aligned_cols=45 Identities=18% Similarity=0.305 Sum_probs=32.0
Q ss_pred HHHHHHHHHHhCC-CcEEEEeeccccCCChhhHhhcCCCCCceEEEEe
Q psy7151 110 EELIKYVKETVGN-MKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRVI 156 (188)
Q Consensus 110 e~iI~~IRe~Vg~-~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~~ 156 (188)
+++.+++++.-+. .+|+..+-|.++.+++.+.+....| ++||=+.
T Consensus 54 ~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~P--VIgVP~~ 99 (174)
T 3kuu_A 54 DRLFSFAEQAEANGLHVIIAGNGGAAHLPGMLAAKTLVP--VLGVPVQ 99 (174)
T ss_dssp HHHHHHHHHTTTTTCSEEEEEEESSCCHHHHHHHTCSSC--EEEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhccCCC--EEEeeCC
Confidence 4445555544332 3688888899999999999987666 8887543
No 92
>3trh_A Phosphoribosylaminoimidazole carboxylase carboxyltransferase subunit; purines, pyrimidines, nucleosides, nucleotides, lyase; 2.20A {Coxiella burnetii}
Probab=23.21 E-value=78 Score=24.98 Aligned_cols=44 Identities=16% Similarity=0.312 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhCC-CcEEEEeeccccCCChhhHhhcCCCCCceEEEE
Q psy7151 110 EELIKYVKETVGN-MKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRV 155 (188)
Q Consensus 110 e~iI~~IRe~Vg~-~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~ 155 (188)
+++.+++++.-+. -+|+..+-|.++++++.+.+....| ++||=+
T Consensus 48 ~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~P--VIgVP~ 92 (169)
T 3trh_A 48 KETVEFVENADNRGCAVFIAAAGLAAHLAGTIAAHTLKP--VIGVPM 92 (169)
T ss_dssp HHHHHHHHHHHHTTEEEEEEEECSSCCHHHHHHHTCSSC--EEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEECChhhhhHHHHHhcCCCC--EEEeec
Confidence 3444444443332 3688888899999999999987666 788754
No 93
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=22.15 E-value=92 Score=24.42 Aligned_cols=44 Identities=11% Similarity=0.285 Sum_probs=31.2
Q ss_pred HHHHHHHHHHhCC-CcEEEEeeccccCCChhhHhhcCCCCCceEEEE
Q psy7151 110 EELIKYVKETVGN-MKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRV 155 (188)
Q Consensus 110 e~iI~~IRe~Vg~-~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~ 155 (188)
+++.+++++.-+. .+|+..+-|.++.+++.+.+....| ++||=+
T Consensus 45 ~~~~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~P--VIgVP~ 89 (163)
T 3ors_A 45 KMMVQFASEARERGINIIIAGAGGAAHLPGMVASLTTLP--VIGVPI 89 (163)
T ss_dssp HHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSC--EEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEEECCchhhhHHHHHhccCCC--EEEeeC
Confidence 4444455544332 4688888899999999999987666 788754
No 94
>3fwk_A FMN adenylyltransferase; FAD biosynthesis, alpha/beta protein, rossmann- like fold, APO-form, extended loop region; HET: BGC; 1.20A {Candida glabrata} PDB: 3g59_A* 3g5a_A* 3g6k_A*
Probab=21.31 E-value=27 Score=30.03 Aligned_cols=25 Identities=16% Similarity=0.234 Sum_probs=17.6
Q ss_pred HHHHHhCC-----CcEEEEeeccccCCChhhHh
Q psy7151 115 YVKETVGN-----MKVLVRKLGLDLGLTPEVVM 142 (188)
Q Consensus 115 ~IRe~Vg~-----~kVi~~~~GlSGGvDSavva 142 (188)
.||+.+.. +++.. .-|||.||+|+-
T Consensus 46 iLrea~~~f~~~~~~ial---SfSGGKDStVLL 75 (308)
T 3fwk_A 46 LINETFPKWSPLNGEISF---SYNGGKDCQVLL 75 (308)
T ss_dssp HHHHTTTTSCSSSSSEEE---ECCSSHHHHHHH
T ss_pred HHHHHHHHcccccCCEEE---EecCChhHHHHH
Confidence 45555442 34555 899999999986
No 95
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=21.06 E-value=84 Score=26.88 Aligned_cols=31 Identities=16% Similarity=0.168 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHHhCCCcEEEEeec---cccCCC
Q psy7151 107 SREEELIKYVKETVGNMKVLVRKLG---LDLGLT 137 (188)
Q Consensus 107 ~~ie~iI~~IRe~Vg~~kVi~~~~G---lSGGvD 137 (188)
.|.-++++.||+.|+++.+..++.. ..||.+
T Consensus 203 Rf~~Eii~avr~~vg~~~v~vRls~~~~~~g~~~ 236 (358)
T 4a3u_A 203 RLLKDVTERVIATIGKERTAVRLSPNGEIQGTVD 236 (358)
T ss_dssp HHHHHHHHHHHHHHCGGGEEEEECCSSCBTTBCC
T ss_pred HHHHHHHHHHHHHcCccceEEEeccCcccCCCcc
Confidence 3888999999999999887776642 345554
No 96
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2, structural genomics, protein structure initiative, midwest for structural genomics; 2.00A {Oenococcus oeni}
Probab=20.87 E-value=49 Score=24.45 Aligned_cols=53 Identities=19% Similarity=0.296 Sum_probs=34.6
Q ss_pred cccchHHHHHHHHHHHHhCCCcEEEEeeccccCCChhhHhhcCCCCCceEEEEec
Q psy7151 103 FTLKSREEELIKYVKETVGNMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRVIC 157 (188)
Q Consensus 103 W~~~~~ie~iI~~IRe~Vg~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~~~ 157 (188)
++++.+++.+.+.|+...+.+++.+ +|-|-|---++.....+|+..-++.+.+
T Consensus 69 ~~~~~~~~~~~~~l~~~~~~~~~~l--~G~S~Gg~~a~~~a~~~p~~v~~lvl~~ 121 (272)
T 3fsg_A 69 STSDNVLETLIEAIEEIIGARRFIL--YGHSYGGYLAQAIAFHLKDQTLGVFLTC 121 (272)
T ss_dssp CSHHHHHHHHHHHHHHHHTTCCEEE--EEEEHHHHHHHHHHHHSGGGEEEEEEEE
T ss_pred CCHHHHHHHHHHHHHHHhCCCcEEE--EEeCchHHHHHHHHHhChHhhheeEEEC
Confidence 7788888999999988666666443 5877665444444444566555555544
No 97
>1o4v_A Phosphoribosylaminoimidazole mutase PURE; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 1.77A {Thermotoga maritima} SCOP: c.23.8.1
Probab=20.74 E-value=1e+02 Score=24.68 Aligned_cols=45 Identities=18% Similarity=0.296 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhC-CCcEEEEeeccccCCChhhHhhcCCCCCceEEEEe
Q psy7151 110 EELIKYVKETVG-NMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRVI 156 (188)
Q Consensus 110 e~iI~~IRe~Vg-~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~~ 156 (188)
+++.+++++.-+ ..+|+..+-|.++.+++.+++....| ++||=+.
T Consensus 55 ~~l~~~~~~a~~~g~~ViIa~AG~aa~LpgvvA~~t~~P--VIgVP~~ 100 (183)
T 1o4v_A 55 DRMFEYAKNAEERGIEVIIAGAGGAAHLPGMVASITHLP--VIGVPVK 100 (183)
T ss_dssp HHHHHHHHHTTTTTCCEEEEEEESSCCHHHHHHHHCSSC--EEEEEEC
T ss_pred HHHHHHHHHHHhCCCcEEEEecCcccccHHHHHhccCCC--EEEeeCC
Confidence 344444444332 24688888899999999999987666 7887543
No 98
>4grd_A N5-CAIR mutase, phosphoribosylaminoimidazole carboxylase catalyti; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures; 1.85A {Burkholderia cenocepacia}
Probab=20.51 E-value=1.2e+02 Score=24.11 Aligned_cols=46 Identities=15% Similarity=0.323 Sum_probs=33.2
Q ss_pred HHHHHHHHHHHhC-CCcEEEEeeccccCCChhhHhhcCCCCCceEEEEe
Q psy7151 109 EEELIKYVKETVG-NMKVLVRKLGLDLGLTPEVVMRHPFPGPGLAIRVI 156 (188)
Q Consensus 109 ie~iI~~IRe~Vg-~~kVi~~~~GlSGGvDSavva~~~~p~~~L~v~~~ 156 (188)
-+++.+++++.-+ .-+|+...-|.++.+++.+.+....| ++||=+.
T Consensus 53 p~~l~~~~~~a~~~g~~ViIa~AG~aahLpgvvA~~t~~P--VIgVPv~ 99 (173)
T 4grd_A 53 PDEMFDYAEKARERGLRAIIAGAGGAAHLPGMLAAKTTVP--VLGVPVA 99 (173)
T ss_dssp HHHHHHHHHHHTTTTCSEEEEEEESSCCHHHHHHHHCCSC--EEEEEEC
T ss_pred HHHHHHHHHHHHhcCCeEEEEeccccccchhhheecCCCC--EEEEEcC
Confidence 4455566666544 34688888899999999999977666 8888543
Done!