Your job contains 1 sequence.
>psy7154
MKYVVLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEITRILN
HIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGVALDIPIGLLD
DIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIKWDL
RKVQPYDGYENFEFDIPIGTHGNVIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPS
RSEMKGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGS
FLADIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLN
IEVPLRAKYIRVMFTFYQWAAQVLT
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7154
(385 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0039909 - symbol:CG1970 species:7227 "Drosophila m... 811 9.8e-97 2
MGI|MGI:2385112 - symbol:Ndufs2 "NADH dehydrogenase (ubiq... 787 7.9e-93 2
RGD|1307109 - symbol:Ndufs2 "NADH dehydrogenase (ubiquino... 788 1.6e-92 2
UNIPROTKB|Q641Y2 - symbol:Ndufs2 "NADH dehydrogenase [ubi... 788 1.6e-92 2
UNIPROTKB|F1PVM9 - symbol:NDUFS2 "Uncharacterized protein... 777 4.9e-91 2
UNIPROTKB|F1S1A8 - symbol:NDUFS2 "Uncharacterized protein... 776 1.0e-90 2
UNIPROTKB|P17694 - symbol:NDUFS2 "NADH dehydrogenase [ubi... 775 1.3e-90 2
UNIPROTKB|Q0MQG3 - symbol:NDUFS2 "NADH dehydrogenase [ubi... 767 1.7e-90 2
UNIPROTKB|Q0MQG4 - symbol:NDUFS2 "NADH dehydrogenase [ubi... 767 2.1e-90 2
UNIPROTKB|Q0MQG5 - symbol:NDUFS2 "NADH dehydrogenase [ubi... 767 2.1e-90 2
ZFIN|ZDB-GENE-051120-30 - symbol:zgc:123301 "zgc:123301" ... 799 3.4e-90 2
UNIPROTKB|J3KPM7 - symbol:NDUFS2 "NADH dehydrogenase [ubi... 767 5.6e-90 2
UNIPROTKB|O75306 - symbol:NDUFS2 "NADH dehydrogenase [ubi... 767 5.6e-90 2
ZFIN|ZDB-GENE-050522-273 - symbol:ndufs2 "NADH dehydrogen... 743 5.6e-88 2
WB|WBGene00006463 - symbol:nduf-2.2 species:6239 "Caenorh... 719 2.8e-80 2
WB|WBGene00001520 - symbol:gas-1 species:6239 "Caenorhabd... 699 3.6e-78 2
ASPGD|ASPL0000048405 - symbol:AN2414 species:162425 "Emer... 679 1.2e-75 2
UNIPROTKB|G4MQN1 - symbol:MGG_09285 "Uncharacterized prot... 671 5.2e-75 2
FB|FBgn0039331 - symbol:CG11913 species:7227 "Drosophila ... 649 8.5e-75 2
CGD|CAL0003145 - symbol:NUC2 species:5476 "Candida albica... 645 6.7e-73 2
UNIPROTKB|Q5AH07 - symbol:NUC2 "Potential mitochondrial C... 645 6.7e-73 2
UNIPROTKB|Q0C1E4 - symbol:nuoD "NADH-quinone oxidoreducta... 525 1.6e-71 2
TIGR_CMR|ECH_0616 - symbol:ECH_0616 "NADH dehydrogenase I... 651 3.3e-71 2
TIGR_CMR|NSE_0566 - symbol:NSE_0566 "NADH dehydrogenase I... 602 2.0e-65 2
TIGR_CMR|APH_0732 - symbol:APH_0732 "NADH dehydrogenase I... 586 1.4e-64 2
UNIPROTKB|Q2F990 - symbol:nad7 "NADH dehydrogenase subuni... 596 2.3e-64 2
UNIPROTKB|Q8HCQ3 - symbol:nad7 "NADH dehydrogenase subuni... 596 2.3e-64 2
UNIPROTKB|B7Z9L2 - symbol:NDUFS2 "cDNA, FLJ78876, highly ... 651 7.6e-64 1
TIGR_CMR|SPO_2782 - symbol:SPO_2782 "NADH dehydrogenase I... 552 2.3e-62 2
DICTYBASE|DDB_G0294030 - symbol:nad7 "NADH dehydrogenase ... 636 3.0e-62 1
UNIPROTKB|P0C335 - symbol:ndhH "NAD(P)H-quinone oxidoredu... 400 8.6e-61 3
UNIPROTKB|P0C336 - symbol:ndhH "NAD(P)H-quinone oxidoredu... 400 8.6e-61 3
UNIPROTKB|P0C337 - symbol:ndhH "NAD(P)H-quinone oxidoredu... 400 8.6e-61 3
UNIPROTKB|Q6ENA1 - symbol:ndhH "NAD(P)H-quinone oxidoredu... 400 8.6e-61 3
TIGR_CMR|CBU_1445 - symbol:CBU_1445 "NADH dehydrogenase I... 320 4.6e-60 3
TIGR_CMR|CJE_1747 - symbol:CJE_1747 "NADH-quinone oxidore... 393 2.5e-59 3
UNIPROTKB|P65569 - symbol:nuoD "NADH-quinone oxidoreducta... 362 1.1e-55 3
TIGR_CMR|DET_0926 - symbol:DET_0926 "proton-translocating... 487 1.3e-51 2
UNIPROTKB|Q3AC80 - symbol:nuoD "NADH-quinone oxidoreducta... 470 1.6e-49 2
TIGR_CMR|CHY_1422 - symbol:CHY_1422 "proton-translocating... 470 1.6e-49 2
TIGR_CMR|GSU_0341 - symbol:GSU_0341 "NADH dehydrogenase I... 444 4.7e-48 2
TIGR_CMR|BA_5539 - symbol:BA_5539 "NADH dehydrogenase I, ... 489 1.1e-46 1
TIGR_CMR|GSU_3444 - symbol:GSU_3444 "NADH dehydrogenase I... 413 4.5e-42 2
UNIPROTKB|Q48H52 - symbol:nuoC "NADH-quinone oxidoreducta... 376 2.8e-39 2
UNIPROTKB|H9KYW0 - symbol:Gga.4571 "Uncharacterized prote... 291 4.0e-39 2
UNIPROTKB|Q4K9T4 - symbol:nuoC "NADH-quinone oxidoreducta... 373 6.3e-39 2
UNIPROTKB|P33599 - symbol:nuoC species:83333 "Escherichia... 366 5.6e-38 2
TIGR_CMR|SO_1019 - symbol:SO_1019 "NADH dehydrogenase I, ... 373 6.3e-34 1
UNIPROTKB|Q3Z856 - symbol:DET0867 "Hydrogenase, group 4, ... 264 5.1e-26 2
TIGR_CMR|DET_0867 - symbol:DET_0867 "hydrogenase, group 4... 264 5.1e-26 2
UNIPROTKB|Q3AB37 - symbol:cooH "Carbon monoxide-induced h... 269 2.3e-23 1
TIGR_CMR|CHY_1827 - symbol:CHY_1827 "carbon monoxide-indu... 269 2.3e-23 1
UNIPROTKB|C5MRJ2 - symbol:ndhH "NdhH" species:4530 "Oryza... 229 8.9e-19 1
UNIPROTKB|C5MRJ4 - symbol:ndhH "NdhH" species:39946 "Oryz... 229 8.9e-19 1
UNIPROTKB|C5MRJ8 - symbol:ndhH "NdhH" species:39947 "Oryz... 229 8.9e-19 1
TIGR_CMR|DET_1571 - symbol:DET_1571 "hydrogenase, group 4... 229 1.9e-16 1
UNIPROTKB|Q74F66 - symbol:ehrL "Ech-hydrogenase-related c... 175 2.5e-10 1
TIGR_CMR|GSU_0743 - symbol:GSU_0743 "NAD-dependent dehydr... 175 2.5e-10 1
UNIPROTKB|P16431 - symbol:hycE "hydrogenase 3, large subu... 173 5.2e-10 1
UNIPROTKB|P77329 - symbol:hyfG "hydrogenase 4, large subu... 122 0.00022 1
>FB|FBgn0039909 [details] [associations]
symbol:CG1970 species:7227 "Drosophila melanogaster"
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=ISS] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=ISS] [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0006120 "mitochondrial electron transport, NADH
to ubiquinone" evidence=ISS] [GO:0051287 "NAD binding"
evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0048812 "neuron
projection morphogenesis" evidence=IMP] [GO:0046331 "lateral
inhibition" evidence=IMP] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0005739 GO:GO:0051287 GO:GO:0048038 GO:GO:0008137
GO:GO:0046331 EMBL:AE014135 eggNOG:COG0649
GeneTree:ENSGT00390000009529 KO:K03935 OMA:QSNRIIK
TIGRFAMs:TIGR01962 EMBL:BT032847 RefSeq:NP_651926.1 UniGene:Dm.7068
SMR:Q9V4E0 IntAct:Q9V4E0 MINT:MINT-780056 STRING:Q9V4E0
EnsemblMetazoa:FBtr0089105 EnsemblMetazoa:FBtr0333676 GeneID:43798
KEGG:dme:Dmel_CG1970 UCSC:CG1970-RA FlyBase:FBgn0039909
InParanoid:Q9V4E0 OrthoDB:EOG4K6DKD GenomeRNAi:43798 NextBio:835907
Uniprot:Q9V4E0
Length = 468
Score = 811 (290.5 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 149/200 (74%), Positives = 176/200 (88%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
LFAEITRILNHIMAVGTHALDVGA+TPFFWLFEEREKMMEFYER SGARMHAAY+RPGGV
Sbjct: 178 LFAEITRILNHIMAVGTHALDVGALTPFFWLFEEREKMMEFYERVSGARMHAAYIRPGGV 237
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
+LD+P+GL+DDIY F S F+ RLDEVED+LT NR+W+QRT+D+GIV+AE+ALNYGFSGVM
Sbjct: 238 SLDMPLGLMDDIYEFASKFAERLDEVEDVLTTNRIWVQRTEDIGIVTAEEALNYGFSGVM 297
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LRGSGIKWDLRK QPYD Y FD+PIGT G+ + ++EMRQSLRI++Q +N+MP
Sbjct: 298 LRGSGIKWDLRKQQPYDAYNLVNFDVPIGTKGDCYDRYLCRVEEMRQSLRIIDQCLNQMP 357
Query: 226 GGEVRTDDMKISTPSRSEMK 245
GE++TDD K++ PSRSEMK
Sbjct: 358 AGEIKTDDAKVAPPSRSEMK 377
Score = 405 (147.6 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
Identities = 80/118 (67%), Positives = 95/118 (80%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI++Q +N+MP GE++TDD K++ PSRSEMK GY VPP
Sbjct: 339 VEEMRQSLRIIDQCLNQMPAGEIKTDDAKVAPPSRSEMKTSMEALIHHFKLFTQGYQVPP 398
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYL+SDG+S+PYRCKIKAPGFAHLAALEKIGK LAD+VAII
Sbjct: 399 GATYTAIEAPKGEFGVYLISDGSSRPYRCKIKAPGFAHLAALEKIGKQHMLADVVAII 456
Score = 334 (122.6 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 62/65 (95%), Positives = 64/65 (98%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNI+VPLRAKY
Sbjct: 115 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIDVPLRAKY 174
Query: 370 IRVMF 374
IR +F
Sbjct: 175 IRTLF 179
Score = 170 (64.9 bits), Expect = 9.8e-97, Sum P(2) = 9.8e-97
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEI 55
V+YPD+ + W + WN + PVEK +RN+ +NFGPQHPAAHGVL L E+
Sbjct: 56 VMYPDEVTSLWTVPPWNSKVTPVEKSVRNLTLNFGPQHPAAHGVLRLVLEL 106
>MGI|MGI:2385112 [details] [associations]
symbol:Ndufs2 "NADH dehydrogenase (ubiquinone) Fe-S protein
2" species:10090 "Mus musculus" [GO:0003954 "NADH dehydrogenase
activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=ISO;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006979
"response to oxidative stress" evidence=ISO] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0016651 "oxidoreductase activity, acting on
NAD(P)H" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048038 "quinone binding" evidence=IEA] [GO:0051287 "NAD
binding" evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0070469 "respiratory chain" evidence=IEA]
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 MGI:MGI:2385112 GO:GO:0006979
GO:GO:0051287 GO:GO:0046872 GO:GO:0051539 GO:GO:0022900
GO:GO:0048038 GO:GO:0005747 GO:GO:0008137 eggNOG:COG0649 CTD:4720
GeneTree:ENSGT00390000009529 HOGENOM:HOG000228264
HOVERGEN:HBG000760 KO:K03935 OMA:QSNRIIK OrthoDB:EOG4D7Z5H
TIGRFAMs:TIGR01962 EMBL:AK078474 EMBL:AK146269 EMBL:AK150431
EMBL:AK151746 EMBL:AK153364 EMBL:AK165426 EMBL:BC003898
EMBL:BC016097 IPI:IPI00128023 RefSeq:NP_694704.1 UniGene:Mm.21669
ProteinModelPortal:Q91WD5 SMR:Q91WD5 IntAct:Q91WD5 STRING:Q91WD5
PhosphoSite:Q91WD5 PaxDb:Q91WD5 PRIDE:Q91WD5
Ensembl:ENSMUST00000013737 GeneID:226646 KEGG:mmu:226646
UCSC:uc007dnm.1 InParanoid:Q91WD5 NextBio:378279 Bgee:Q91WD5
CleanEx:MM_NDUFS2 Genevestigator:Q91WD5
GermOnline:ENSMUSG00000013593 Uniprot:Q91WD5
Length = 463
Score = 787 (282.1 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 146/216 (67%), Positives = 175/216 (81%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITRILNHIMAV THALD+GAMTPFFW+FEEREKM EFYER
Sbjct: 158 LLNIQPP-PRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GLLDDIY F FS R+DEVE+MLT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLLDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AEDALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+PIG+ G+ + ++E
Sbjct: 277 VVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 394 (143.8 bits), Expect = 2.0e-51, Sum P(2) = 2.0e-51
Identities = 78/118 (66%), Positives = 92/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 301 (111.0 bits), Expect = 3.2e-41, Sum P(2) = 3.2e-41
Identities = 57/71 (80%), Positives = 64/71 (90%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YS+AVEKLLNI+
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSIAVEKLLNIQP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 157 (60.3 bits), Expect = 7.9e-93, Sum P(2) = 7.9e-93
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND + EK + NM +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDILKEKAVTNMTLNFGPQHPAAHGVLRLVLELS 102
>RGD|1307109 [details] [associations]
symbol:Ndufs2 "NADH dehydrogenase (ubiquinone) Fe-S protein 2"
species:10116 "Rattus norvegicus" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005739 "mitochondrion" evidence=ISO] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=IEA;ISO]
[GO:0006979 "response to oxidative stress" evidence=IEA;ISO]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048038 "quinone
binding" evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0003954 "NADH dehydrogenase activity" evidence=ISO]
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 RGD:1307109 GO:GO:0005743
GO:GO:0051287 GO:GO:0046872 GO:GO:0051539 GO:GO:0022900
GO:GO:0048038 GO:GO:0070469 GO:GO:0008137 CTD:4720
HOVERGEN:HBG000760 KO:K03935 TIGRFAMs:TIGR01962 EMBL:BC082067
IPI:IPI00471647 RefSeq:NP_001011907.1 RefSeq:XP_003751325.1
UniGene:Rn.99666 HSSP:Q56220 ProteinModelPortal:Q641Y2
World-2DPAGE:0004:Q641Y2 PRIDE:Q641Y2 GeneID:289218 KEGG:rno:289218
UCSC:RGD:1307109 NextBio:629400 Genevestigator:Q641Y2
Uniprot:Q641Y2
Length = 463
Score = 788 (282.4 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 146/216 (67%), Positives = 175/216 (81%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITRILNHIMAV THALD+GAMTPFFW+FEEREKM EFYER
Sbjct: 158 LLNIQPP-PRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS R+DEVE+MLT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+VSAEDALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+PIG+ G+ + ++E
Sbjct: 277 VVSAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 394 (143.8 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 78/118 (66%), Positives = 92/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 303 (111.7 bits), Expect = 4.8e-41, Sum P(2) = 4.8e-41
Identities = 58/71 (81%), Positives = 64/71 (90%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI+
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 153 (58.9 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND V EK + N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDVLKEKVVTNVTLNFGPQHPAAHGVLRLVLELS 102
>UNIPROTKB|Q641Y2 [details] [associations]
symbol:Ndufs2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:10116 "Rattus norvegicus"
[GO:0048038 "quinone binding" evidence=IEA] [GO:0051287 "NAD
binding" evidence=IEA] InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 RGD:1307109
GO:GO:0005743 GO:GO:0051287 GO:GO:0046872 GO:GO:0051539
GO:GO:0022900 GO:GO:0048038 GO:GO:0070469 GO:GO:0008137 CTD:4720
HOVERGEN:HBG000760 KO:K03935 TIGRFAMs:TIGR01962 EMBL:BC082067
IPI:IPI00471647 RefSeq:NP_001011907.1 RefSeq:XP_003751325.1
UniGene:Rn.99666 HSSP:Q56220 ProteinModelPortal:Q641Y2
World-2DPAGE:0004:Q641Y2 PRIDE:Q641Y2 GeneID:289218 KEGG:rno:289218
UCSC:RGD:1307109 NextBio:629400 Genevestigator:Q641Y2
Uniprot:Q641Y2
Length = 463
Score = 788 (282.4 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 146/216 (67%), Positives = 175/216 (81%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITRILNHIMAV THALD+GAMTPFFW+FEEREKM EFYER
Sbjct: 158 LLNIQPP-PRAQWIRVLFGEITRILNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS R+DEVE+MLT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYEFSKNFSLRIDEVEEMLTNNRIWRNRTVDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+VSAEDALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+PIG+ G+ + ++E
Sbjct: 277 VVSAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 394 (143.8 bits), Expect = 5.4e-51, Sum P(2) = 5.4e-51
Identities = 78/118 (66%), Positives = 92/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 303 (111.7 bits), Expect = 4.8e-41, Sum P(2) = 4.8e-41
Identities = 58/71 (81%), Positives = 64/71 (90%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI+
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 153 (58.9 bits), Expect = 1.6e-92, Sum P(2) = 1.6e-92
Identities = 29/52 (55%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND V EK + N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDVLKEKVVTNVTLNFGPQHPAAHGVLRLVLELS 102
>UNIPROTKB|F1PVM9 [details] [associations]
symbol:NDUFS2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051287 "NAD binding" evidence=IEA]
[GO:0048038 "quinone binding" evidence=IEA] [GO:0016651
"oxidoreductase activity, acting on NAD(P)H" evidence=IEA]
HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0051287
GO:GO:0048038 GO:GO:0016651 CTD:4720 GeneTree:ENSGT00390000009529
KO:K03935 OMA:QSNRIIK TIGRFAMs:TIGR01962 EMBL:AAEX03018445
RefSeq:XP_536138.2 Ensembl:ENSCAFT00000020426 GeneID:478981
KEGG:cfa:478981 Uniprot:F1PVM9
Length = 463
Score = 777 (278.6 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 143/216 (66%), Positives = 175/216 (81%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFW+FEEREKM EFYER
Sbjct: 158 LLNIQPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAYVRPGGV D+P+GL+DDIY F FS R+DE+E+MLT NR+W RT D+G
Sbjct: 217 VSGARMHAAYVRPGGVHQDLPLGLMDDIYEFSKNFSLRVDELEEMLTNNRIWKNRTVDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AEDALNYGFSGVMLRGSGI+WDLRK QPYD Y+ +FD+PIG+ G+ + ++E
Sbjct: 277 VVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVDFDVPIGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 394 (143.8 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 78/118 (66%), Positives = 92/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+EQ +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIEQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 303 (111.7 bits), Expect = 9.8e-41, Sum P(2) = 9.8e-41
Identities = 58/71 (81%), Positives = 64/71 (90%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI+
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 150 (57.9 bits), Expect = 4.9e-91, Sum P(2) = 4.9e-91
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + + N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPTKETAHWKPPPWNDVDPPKDTMVTNLTLNFGPQHPAAHGVLRLVMELS 102
>UNIPROTKB|F1S1A8 [details] [associations]
symbol:NDUFS2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006979 "response to oxidative stress" evidence=IEA]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IEA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA] [GO:0048038
"quinone binding" evidence=IEA] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0006979 GO:GO:0051287 GO:GO:0048038 GO:GO:0005747
GO:GO:0003954 GeneTree:ENSGT00390000009529 OMA:QSNRIIK
TIGRFAMs:TIGR01962 EMBL:CU463216 Ensembl:ENSSSCT00000006967
Uniprot:F1S1A8
Length = 463
Score = 776 (278.2 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 143/216 (66%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFW+FEEREKM EFYER
Sbjct: 158 LLNIQPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GLLDDIY F FS R+DE+E+MLT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLLDDIYEFSKNFSFRIDELEEMLTNNRIWRNRTVDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AEDALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+PIG+ G+ + ++E
Sbjct: 277 VVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIISQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 389 (142.0 bits), Expect = 6.0e-50, Sum P(2) = 6.0e-50
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 303 (111.7 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 58/71 (81%), Positives = 64/71 (90%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI+
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 148 (57.2 bits), Expect = 1.0e-90, Sum P(2) = 1.0e-90
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + + N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPTKETAHWKPPPWNDVDPPKDTLVSNLTLNFGPQHPAAHGVLRLVMELS 102
>UNIPROTKB|P17694 [details] [associations]
symbol:NDUFS2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:9913 "Bos taurus" [GO:0006979
"response to oxidative stress" evidence=ISS;IDA] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0003954 "NADH
dehydrogenase activity" evidence=ISS] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0051539 "4
iron, 4 sulfur cluster binding" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] [GO:0022900 "electron transport chain"
evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA] [GO:0048038
"quinone binding" evidence=IEA] InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0006979 GO:GO:0051287 GO:GO:0046872 GO:GO:0051539
GO:GO:0022900 GO:GO:0048038 TCDB:3.D.1.6.1 GO:GO:0005747
GO:GO:0008137 eggNOG:COG0649 EMBL:BC119924 EMBL:X14338
IPI:IPI00708720 PIR:S04104 RefSeq:NP_001068605.1 UniGene:Bt.4475
IntAct:P17694 STRING:P17694 PRIDE:P17694 Ensembl:ENSBTAT00000002852
GeneID:327697 KEGG:bta:327697 CTD:4720 GeneTree:ENSGT00390000009529
HOGENOM:HOG000228264 HOVERGEN:HBG000760 InParanoid:P17694 KO:K03935
OMA:QSNRIIK OrthoDB:EOG4D7Z5H NextBio:20810161 TIGRFAMs:TIGR01962
Uniprot:P17694
Length = 463
Score = 775 (277.9 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 143/216 (66%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFW+FEEREKM EFYER
Sbjct: 158 LLNIQPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDIGAMTPFFWMFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAYVRPGGV D+P+GL+DDIY F FS R+DE+E+MLT NR+W RT D+G
Sbjct: 217 VSGARMHAAYVRPGGVHQDLPLGLMDDIYEFSKNFSLRIDELEEMLTNNRIWRNRTVDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
IV+AEDALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+PIG+ G+ + ++E
Sbjct: 277 IVTAEDALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPIGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQS+RI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSIRIISQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 387 (141.3 bits), Expect = 9.8e-50, Sum P(2) = 9.8e-50
Identities = 76/118 (64%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQS+RI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSIRIISQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 303 (111.7 bits), Expect = 1.6e-40, Sum P(2) = 1.6e-40
Identities = 58/71 (81%), Positives = 64/71 (90%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI+
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 148 (57.2 bits), Expect = 1.3e-90, Sum P(2) = 1.3e-90
Identities = 27/52 (51%), Positives = 34/52 (65%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + + N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPTKETAHWKPPPWNDVDPPKDTLVSNLTLNFGPQHPAAHGVLRLVMELS 102
>UNIPROTKB|Q0MQG3 [details] [associations]
symbol:NDUFS2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:9600 "Pongo pygmaeus" [GO:0005739
"mitochondrion" evidence=ISS] [GO:0005747 "mitochondrial
respiratory chain complex I" evidence=ISS] [GO:0006979 "response to
oxidative stress" evidence=ISS] [GO:0003954 "NADH dehydrogenase
activity" evidence=ISS] InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0006979
GO:GO:0051287 GO:GO:0046872 GO:GO:0051539 GO:GO:0022900
GO:GO:0048038 GO:GO:0005747 GO:GO:0008137 eggNOG:COG0649
HOGENOM:HOG000228264 HOVERGEN:HBG000760 OrthoDB:EOG4D7Z5H
TIGRFAMs:TIGR01962 EMBL:DQ885671 STRING:Q0MQG3 InParanoid:Q0MQG3
Uniprot:Q0MQG3
Length = 463
Score = 767 (275.1 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 141/216 (65%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFWLFEEREKM EFYER
Sbjct: 158 LLNIRPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS RLDE+E++LT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AE+ALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+P+G+ G+ + ++E
Sbjct: 277 VVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 389 (142.0 bits), Expect = 1.1e-50, Sum P(2) = 1.1e-50
Identities = 77/118 (65%), Positives = 92/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA+L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLASLDKMSKGHMLADVVAII 451
Score = 301 (111.0 bits), Expect = 5.1e-41, Sum P(2) = 5.1e-41
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 155 (59.6 bits), Expect = 1.7e-90, Sum P(2) = 1.7e-90
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + ++NM +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVEPPKDTIVKNMTLNFGPQHPAAHGVLRLVMELS 102
>UNIPROTKB|Q0MQG4 [details] [associations]
symbol:NDUFS2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:9595 "Gorilla gorilla gorilla"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0003954 "NADH dehydrogenase activity" evidence=ISS]
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0006979 GO:GO:0051287
GO:GO:0046872 GO:GO:0051539 GO:GO:0022900 GO:GO:0048038
GO:GO:0005747 GO:GO:0008137 HOVERGEN:HBG000760 OMA:QSNRIIK
OrthoDB:EOG4D7Z5H TIGRFAMs:TIGR01962 EMBL:DQ885670 PRIDE:Q0MQG4
Uniprot:Q0MQG4
Length = 463
Score = 767 (275.1 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 141/216 (65%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFWLFEEREKM EFYER
Sbjct: 158 LLNIRPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS RLDE+E++LT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AE+ALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+P+G+ G+ + ++E
Sbjct: 277 VVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 388 (141.6 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 301 (111.0 bits), Expect = 6.5e-41, Sum P(2) = 6.5e-41
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 154 (59.3 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + ++NM +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDPPKDTIVKNMTLNFGPQHPAAHGVLRLVMELS 102
>UNIPROTKB|Q0MQG5 [details] [associations]
symbol:NDUFS2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:9598 "Pan troglodytes"
[GO:0005739 "mitochondrion" evidence=ISS] [GO:0005747
"mitochondrial respiratory chain complex I" evidence=ISS]
[GO:0006979 "response to oxidative stress" evidence=ISS]
[GO:0003954 "NADH dehydrogenase activity" evidence=ISS]
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0006979 GO:GO:0051287
GO:GO:0046872 GO:GO:0051539 GO:GO:0022900 GO:GO:0048038
GO:GO:0005747 GO:GO:0008137 eggNOG:COG0649 CTD:4720
GeneTree:ENSGT00390000009529 HOGENOM:HOG000228264
HOVERGEN:HBG000760 KO:K03935 OMA:QSNRIIK OrthoDB:EOG4D7Z5H
TIGRFAMs:TIGR01962 EMBL:DQ885669 RefSeq:NP_001065294.1
UniGene:Ptr.6114 STRING:Q0MQG5 Ensembl:ENSPTRT00000002879
GeneID:747334 KEGG:ptr:747334 InParanoid:Q0MQG5 NextBio:20914106
Uniprot:Q0MQG5
Length = 463
Score = 767 (275.1 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 141/216 (65%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFWLFEEREKM EFYER
Sbjct: 158 LLNIRPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS RLDE+E++LT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AE+ALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+P+G+ G+ + ++E
Sbjct: 277 VVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 388 (141.6 bits), Expect = 1.8e-50, Sum P(2) = 1.8e-50
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 301 (111.0 bits), Expect = 6.5e-41, Sum P(2) = 6.5e-41
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 154 (59.3 bits), Expect = 2.1e-90, Sum P(2) = 2.1e-90
Identities = 28/52 (53%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + ++NM +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDPPKDTIVKNMTLNFGPQHPAAHGVLRLVMELS 102
>ZFIN|ZDB-GENE-051120-30 [details] [associations]
symbol:zgc:123301 "zgc:123301" species:7955 "Danio
rerio" [GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0051287 "NAD binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016491 "oxidoreductase
activity" evidence=IEA] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
ZFIN:ZDB-GENE-051120-30 GO:GO:0051287 GO:GO:0048038 GO:GO:0016651
HOVERGEN:HBG000760 KO:K03935 TIGRFAMs:TIGR01962 EMBL:BC109437
IPI:IPI00656513 RefSeq:NP_001032494.1 UniGene:Dr.93261
ProteinModelPortal:Q32LT4 PRIDE:Q32LT4 GeneID:641476
KEGG:dre:641476 NextBio:20901581 Uniprot:Q32LT4
Length = 462
Score = 799 (286.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 149/200 (74%), Positives = 170/200 (85%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
+FAEITRILNH+M VGTHALD+GA+TPFFWLFEEREKMMEFYER SGARMHAAYVRPGGV
Sbjct: 172 MFAEITRILNHLMQVGTHALDIGALTPFFWLFEEREKMMEFYERVSGARMHAAYVRPGGV 231
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
LD+P+GL+DDIY FI F RLDEVED+LTENR+W QRT D+G+VSAEDALN+GFSGVM
Sbjct: 232 YLDLPLGLMDDIYTFIKQFGQRLDEVEDVLTENRIWKQRTVDIGVVSAEDALNWGFSGVM 291
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LRGSGIKWDLRK QPYD Y+ +FDIPIGT G+ + M+EMRQSLRI+EQ +NKMP
Sbjct: 292 LRGSGIKWDLRKSQPYDAYDVVDFDIPIGTKGDCYDRYLCRMEEMRQSLRIIEQCLNKMP 351
Query: 226 GGEVRTDDMKISTPSRSEMK 245
GE+R DD K+ P R EMK
Sbjct: 352 AGEIRADDSKVVPPKRGEMK 371
Score = 384 (140.2 bits), Expect = 1.8e-46, Sum P(2) = 1.8e-46
Identities = 78/118 (66%), Positives = 89/118 (75%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
M+EMRQSLRI+EQ +NKMP GE+R DD K+ P R EMK G+ VPP
Sbjct: 333 MEEMRQSLRIIEQCLNKMPAGEIRADDSKVVPPKRGEMKSSMESLIHHFKLYTEGFNVPP 392
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
G TYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLAAL+ IG+ LADIVAII
Sbjct: 393 GQTYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAALDYIGRNHMLADIVAII 450
Score = 332 (121.9 bits), Expect = 5.2e-41, Sum P(2) = 5.2e-41
Identities = 62/65 (95%), Positives = 63/65 (96%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQCYSLAVEKLLN+EVPLRAKY
Sbjct: 109 DPHIGLLHRGTEKLIEYKTYMQALPYFDRLDYVSMMCNEQCYSLAVEKLLNLEVPLRAKY 168
Query: 370 IRVMF 374
IR MF
Sbjct: 169 IRTMF 173
Score = 120 (47.3 bits), Expect = 3.4e-90, Sum P(2) = 3.4e-90
Identities = 25/48 (52%), Positives = 32/48 (66%)
Query: 9 DKEETKWKI-INWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEI 55
+ E TKW + I PVEK++ N+ +NFGPQHPAAHGVL L E+
Sbjct: 53 EAEGTKWTLPIESVRYEPPVEKKVANLQLNFGPQHPAAHGVLRLVLEL 100
>UNIPROTKB|J3KPM7 [details] [associations]
symbol:NDUFS2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:9606 "Homo sapiens" [GO:0016651
"oxidoreductase activity, acting on NAD(P)H" evidence=IEA]
[GO:0048038 "quinone binding" evidence=IEA] [GO:0051287 "NAD
binding" evidence=IEA] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0051287 GO:GO:0048038 EMBL:AL590714 GO:GO:0016651 CTD:4720
KO:K03935 TIGRFAMs:TIGR01962 RefSeq:NP_001159631.1
UniGene:Hs.173611 GeneID:4720 KEGG:hsa:4720 HGNC:HGNC:7708
ChiTaRS:NDUFS2 ProteinModelPortal:J3KPM7 Ensembl:ENST00000392179
Uniprot:J3KPM7
Length = 457
Score = 767 (275.1 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 141/216 (65%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFWLFEEREKM EFYER
Sbjct: 158 LLNIRPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS RLDE+E++LT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AE+ALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+P+G+ G+ + ++E
Sbjct: 277 VVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 388 (141.6 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 301 (111.0 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 150 (57.9 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + ++N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDPPKDTIVKNITLNFGPQHPAAHGVLRLVMELS 102
>UNIPROTKB|O75306 [details] [associations]
symbol:NDUFS2 "NADH dehydrogenase [ubiquinone] iron-sulfur
protein 2, mitochondrial" species:9606 "Homo sapiens" [GO:0048038
"quinone binding" evidence=IEA] [GO:0051287 "NAD binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0006120 "mitochondrial electron transport, NADH to ubiquinone"
evidence=NAS] [GO:0009055 "electron carrier activity" evidence=NAS]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=NAS] [GO:0005739 "mitochondrion" evidence=IDA;NAS]
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=IDA;IMP;NAS] [GO:0003954 "NADH dehydrogenase activity"
evidence=IMP] [GO:0006979 "response to oxidative stress"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005743 "mitochondrial inner membrane" evidence=TAS]
[GO:0022904 "respiratory electron transport chain" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
Reactome:REACT_111217 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0006979
DrugBank:DB00157 GO:GO:0044281 GO:GO:0051287 GO:GO:0009055
GO:GO:0046872 GO:GO:0051539 GO:GO:0048038 Orphanet:2609
GO:GO:0005747 GO:GO:0008137 GO:GO:0006120 EMBL:CH471121
EMBL:AL590714 MIM:252010 eggNOG:COG0649 CTD:4720
HOGENOM:HOG000228264 HOVERGEN:HBG000760 KO:K03935 OMA:QSNRIIK
OrthoDB:EOG4D7Z5H TIGRFAMs:TIGR01962 EMBL:AF050640 EMBL:AF013160
EMBL:BC000170 EMBL:BC001456 EMBL:BC008868 IPI:IPI00025239
PIR:JE0193 RefSeq:NP_001159631.1 RefSeq:NP_004541.1
UniGene:Hs.173611 ProteinModelPortal:O75306 SMR:O75306
IntAct:O75306 STRING:O75306 PhosphoSite:O75306 PaxDb:O75306
PeptideAtlas:O75306 PRIDE:O75306 DNASU:4720 Ensembl:ENST00000367993
GeneID:4720 KEGG:hsa:4720 UCSC:uc001fyv.3 GeneCards:GC01P161166
HGNC:HGNC:7708 MIM:602985 neXtProt:NX_O75306 PharmGKB:PA31519
InParanoid:O75306 PhylomeDB:O75306 BindingDB:O75306
ChEMBL:CHEMBL3039 ChiTaRS:NDUFS2 GenomeRNAi:4720 NextBio:18206
ArrayExpress:O75306 Bgee:O75306 CleanEx:HS_NDUFS2
Genevestigator:O75306 GermOnline:ENSG00000158864 Uniprot:O75306
Length = 463
Score = 767 (275.1 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 141/216 (65%), Positives = 174/216 (80%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFWLFEEREKM EFYER
Sbjct: 158 LLNIRPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 216
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS RLDE+E++LT NR+W RT D+G
Sbjct: 217 VSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIG 276
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKE 209
+V+AE+ALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+P+G+ G+ + ++E
Sbjct: 277 VVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGDCYDRYLCRVEE 336
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
MRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK
Sbjct: 337 MRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMK 372
Score = 388 (141.6 bits), Expect = 4.7e-50, Sum P(2) = 4.7e-50
Identities = 77/118 (65%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD K+S P R+EMK GY VPP
Sbjct: 334 VEEMRQSLRIIAQCLNKMPPGEIKVDDAKVSPPKRAEMKTSMESLIHHFKLYTEGYQVPP 393
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+K+ KG LAD+VAII
Sbjct: 394 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDKMSKGHMLADVVAII 451
Score = 301 (111.0 bits), Expect = 1.7e-40, Sum P(2) = 1.7e-40
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI
Sbjct: 104 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRP 163
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 164 PPRAQWIRVLF 174
Score = 150 (57.9 bits), Expect = 5.6e-90, Sum P(2) = 5.6e-90
Identities = 27/52 (51%), Positives = 35/52 (67%)
Query: 5 VLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
V+YP KE WK WND P + ++N+ +NFGPQHPAAHGVL L E++
Sbjct: 51 VMYPSKETAHWKPPPWNDVDPPKDTIVKNITLNFGPQHPAAHGVLRLVMELS 102
>ZFIN|ZDB-GENE-050522-273 [details] [associations]
symbol:ndufs2 "NADH dehydrogenase (ubiquinone) Fe-S
protein 2" species:7955 "Danio rerio" [GO:0016651 "oxidoreductase
activity, acting on NAD(P)H" evidence=IEA] [GO:0048038 "quinone
binding" evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 ZFIN:ZDB-GENE-050522-273 GO:GO:0051287
GO:GO:0048038 GO:GO:0016651 CTD:4720 GeneTree:ENSGT00390000009529
KO:K03935 TIGRFAMs:TIGR01962 EMBL:CU972454 EMBL:CT583661
IPI:IPI00501910 RefSeq:NP_001018481.2 UniGene:Dr.78170
Ensembl:ENSDART00000108787 GeneID:553672 KEGG:dre:553672
NextBio:20880404 Uniprot:F1Q4N4
Length = 464
Score = 743 (266.6 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 136/208 (65%), Positives = 167/208 (80%)
Query: 43 PAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHA 102
P A + +LF E+TRI+NHIM + THALD+GAMTPFFW+FEEREK+ EFYER SGARMHA
Sbjct: 166 PRAQWIRVLFGEMTRIMNHIMGITTHALDIGAMTPFFWMFEEREKLFEFYERVSGARMHA 225
Query: 103 AYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDAL 162
AYVRPGGV D+P+GL+DDIY + FS R+DEVE+MLT NR+W RT +G++ AE+AL
Sbjct: 226 AYVRPGGVHQDMPLGLMDDIYEWCKNFSIRIDEVEEMLTNNRIWKNRTVGIGVIGAEEAL 285
Query: 163 NYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIV 217
NYGFSGVMLRGSGIKWDLRK QPYD Y+ EFD+ IGT+G+ + ++EMRQSLRI+
Sbjct: 286 NYGFSGVMLRGSGIKWDLRKSQPYDKYDEVEFDMAIGTNGDCYDRYLCRVEEMRQSLRIM 345
Query: 218 EQAINKMPGGEVRTDDMKISTPSRSEMK 245
Q +NKMP GE++ DD KI+ P RSEMK
Sbjct: 346 HQCLNKMPPGEIKVDDAKIAPPKRSEMK 373
Score = 381 (139.2 bits), Expect = 7.7e-50, Sum P(2) = 7.7e-50
Identities = 76/118 (64%), Positives = 91/118 (77%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSLRI+ Q +NKMP GE++ DD KI+ P RSEMK GY VPP
Sbjct: 335 VEEMRQSLRIMHQCLNKMPPGEIKVDDAKIAPPKRSEMKTSMESLIHHFKLYTEGYQVPP 394
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATYTA+EAPKGEFGVYLVSDG+S+PYRCKIKAPGFAHLA L+++ +G LAD+VAII
Sbjct: 395 GATYTAIEAPKGEFGVYLVSDGSSRPYRCKIKAPGFAHLAGLDRMSQGHMLADVVAII 452
Score = 303 (111.7 bits), Expect = 3.0e-41, Sum P(2) = 3.0e-41
Identities = 57/65 (87%), Positives = 61/65 (93%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI+ P RA++
Sbjct: 111 DPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIQAPPRAQW 170
Query: 370 IRVMF 374
IRV+F
Sbjct: 171 IRVLF 175
Score = 155 (59.6 bits), Expect = 5.6e-88, Sum P(2) = 5.6e-88
Identities = 28/53 (52%), Positives = 34/53 (64%)
Query: 4 VVLYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
VV+YP KW WND P +K + N+ INFGPQHPAAHGVL L E++
Sbjct: 51 VVMYPSPSVAKWTPPPWNDKDPPAQKDLSNLTINFGPQHPAAHGVLRLVMELS 103
>WB|WBGene00006463 [details] [associations]
symbol:nduf-2.2 species:6239 "Caenorhabditis elegans"
[GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0051287 "NAD binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0006898 "receptor-mediated
endocytosis" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0008340 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0002119 GO:GO:0051287 GO:GO:0048038 GO:GO:0016651
EMBL:FO080366 eggNOG:COG0649 GeneTree:ENSGT00390000009529
HOGENOM:HOG000228264 KO:K03935 TIGRFAMs:TIGR01962 OMA:LRMNHAF
PIR:T34389 RefSeq:NP_498423.1 ProteinModelPortal:Q22800 SMR:Q22800
STRING:Q22800 PaxDb:Q22800 EnsemblMetazoa:T26A5.3 GeneID:188912
KEGG:cel:CELE_T26A5.3 CTD:188912 WormBase:T26A5.3 InParanoid:Q22800
NextBio:940538 Uniprot:Q22800
Length = 474
Score = 719 (258.2 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 134/208 (64%), Positives = 165/208 (79%)
Query: 43 PAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHA 102
P A + +LF E+TRI NHIM + THALDVGAMTPFFW+FEEREK+ EF ER SGARMHA
Sbjct: 176 PRAKYIRILFGELTRIQNHIMGITTHALDVGAMTPFFWMFEEREKLFEFSERVSGARMHA 235
Query: 103 AYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDAL 162
YVRPGGVA D+P+GL+DDIY + F AR+DE+EDMLTENR+W RT D+G+VSA DAL
Sbjct: 236 NYVRPGGVAWDLPVGLMDDIYDWAVKFPARIDELEDMLTENRIWKARTVDIGLVSASDAL 295
Query: 163 NYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIV 217
N+GFSGVM+RGSGIK D+RK +PYD Y + EFD+PIGT G+ + ++EMRQSL IV
Sbjct: 296 NWGFSGVMVRGSGIKQDVRKTEPYDAYADMEFDVPIGTKGDCYDRYLCRVEEMRQSLNIV 355
Query: 218 EQAINKMPGGEVRTDDMKISTPSRSEMK 245
Q +NKMP GE+++DD K+ P R+EMK
Sbjct: 356 HQCLNKMPTGEIKSDDHKVVPPKRAEMK 383
Score = 334 (122.6 bits), Expect = 9.4e-40, Sum P(2) = 9.4e-40
Identities = 68/118 (57%), Positives = 84/118 (71%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSL IV Q +NKMP GE+++DD K+ P R+EMK G+ VPP
Sbjct: 345 VEEMRQSLNIVHQCLNKMPTGEIKSDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPP 404
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATY +EAPKGEFGVYLV+DGT KPYRC I+APGFAHLAA+ + S +ADIVA+I
Sbjct: 405 GATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVI 462
Score = 293 (108.2 bits), Expect = 9.7e-35, Sum P(2) = 9.7e-35
Identities = 54/64 (84%), Positives = 60/64 (93%)
Query: 311 PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKYI 370
PHIGLLHR TEKLIE+KTYTQALPYFDRLDYVSMMCNEQ +SLA+EKLL I+VP RAKYI
Sbjct: 122 PHIGLLHRATEKLIEHKTYTQALPYFDRLDYVSMMCNEQAFSLAIEKLLGIDVPPRAKYI 181
Query: 371 RVMF 374
R++F
Sbjct: 182 RILF 185
Score = 106 (42.4 bits), Expect = 2.8e-80, Sum P(2) = 2.8e-80
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 28 EKQIRNMVINFGPQHPAAHGVLLLFAEI 55
EK + NM++NFGPQHPAAHGVL L ++
Sbjct: 85 EKNLENMILNFGPQHPAAHGVLRLVLKL 112
>WB|WBGene00001520 [details] [associations]
symbol:gas-1 species:6239 "Caenorhabditis elegans"
[GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0051287 "NAD binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=IMP] [GO:0042493 "response to drug" evidence=IMP]
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0006898 GO:GO:0040007
GO:GO:0002119 GO:GO:0005743 GO:GO:0051287 GO:GO:0042493
GO:GO:0046872 GO:GO:0000003 GO:GO:0051539 GO:GO:0048038
GO:GO:0070469 GO:GO:0008137 GO:GO:0006120 eggNOG:COG0649
GeneTree:ENSGT00390000009529 HOGENOM:HOG000228264 KO:K03935
TIGRFAMs:TIGR01962 EMBL:Z79601 PIR:T23532 RefSeq:NP_510569.1
ProteinModelPortal:Q93873 SMR:Q93873 STRING:Q93873 PaxDb:Q93873
EnsemblMetazoa:K09A9.5 GeneID:181646 KEGG:cel:CELE_K09A9.5
UCSC:K09A9.5 CTD:181646 WormBase:K09A9.5 InParanoid:Q93873
OMA:FGPFLAD NextBio:914808 Uniprot:Q93873
Length = 482
Score = 699 (251.1 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 131/200 (65%), Positives = 158/200 (79%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
L E+TRI NHIM + THALDVGAMTPFFW+FEEREK+ EF ER SGARMHA YVRPGGV
Sbjct: 192 LMGELTRIQNHIMGITTHALDVGAMTPFFWMFEEREKLFEFSERVSGARMHANYVRPGGV 251
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
A D+PIGL+DDIY + F R+DE+EDMLTENR+W RT D+G+VSA DALN+GFSGVM
Sbjct: 252 AWDLPIGLMDDIYDWAIKFPERIDELEDMLTENRIWKARTIDIGLVSAADALNWGFSGVM 311
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
+RGSGIK D+RK +PYD Y + EFD+PIGT G+ + ++EMRQSL IV Q +NKMP
Sbjct: 312 VRGSGIKQDVRKTEPYDAYADMEFDVPIGTKGDCYDRYLCRIEEMRQSLNIVHQCLNKMP 371
Query: 226 GGEVRTDDMKISTPSRSEMK 245
GE++ DD K+ P R+EMK
Sbjct: 372 AGEIKVDDHKVVPPKRAEMK 391
Score = 335 (123.0 bits), Expect = 7.4e-40, Sum P(2) = 7.4e-40
Identities = 68/118 (57%), Positives = 83/118 (70%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
++EMRQSL IV Q +NKMP GE++ DD K+ P R+EMK G+ VPP
Sbjct: 353 IEEMRQSLNIVHQCLNKMPAGEIKVDDHKVVPPKRAEMKENMESLIHHFKFFTEGFQVPP 412
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
GATY +EAPKGEFGVYLV+DGT KPYRC I+APGFAHLAA+ + S +ADIVA+I
Sbjct: 413 GATYVPIEAPKGEFGVYLVADGTGKPYRCFIRAPGFAHLAAIHDVCYMSLIADIVAVI 470
Score = 285 (105.4 bits), Expect = 1.0e-33, Sum P(2) = 1.0e-33
Identities = 53/63 (84%), Positives = 58/63 (92%)
Query: 311 PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKYI 370
PHIGLLHR TEKLIE+KTYTQALPYFDRLDYVSMMCNEQ +SLAVEKLL I++P RAKYI
Sbjct: 130 PHIGLLHRATEKLIEHKTYTQALPYFDRLDYVSMMCNEQAWSLAVEKLLGIDIPTRAKYI 189
Query: 371 RVM 373
R +
Sbjct: 190 RTL 192
Score = 106 (42.4 bits), Expect = 3.6e-78, Sum P(2) = 3.6e-78
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 28 EKQIRNMVINFGPQHPAAHGVLLLFAEI 55
EK + NM++NFGPQHPAAHGVL L ++
Sbjct: 93 EKNLENMILNFGPQHPAAHGVLRLVLKL 120
>ASPGD|ASPL0000048405 [details] [associations]
symbol:AN2414 species:162425 "Emericella nidulans"
[GO:0006091 "generation of precursor metabolites and energy"
evidence=RCA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=RCA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0051287 "NAD binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0051287 EMBL:BN001307 GO:GO:0048038 GO:GO:0016651
HOGENOM:HOG000228264 OMA:QSNRIIK TIGRFAMs:TIGR01962
EnsemblFungi:CADANIAT00009121 Uniprot:C8VNX5
Length = 475
Score = 679 (244.1 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 123/200 (61%), Positives = 158/200 (79%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
+F EITRILNH+M+V +HA+DVGA+TPF W FEEREK+MEFYER SGAR+HAAYVRPGGV
Sbjct: 185 MFGEITRILNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSGARLHAAYVRPGGV 244
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
+ D+P+GLLDDIY + + F R+DE E++LT+NR+W RT+ VG+VSA DALN F+GVM
Sbjct: 245 SQDLPLGLLDDIYQWATQFGDRIDETEELLTDNRIWKARTQGVGVVSAADALNMSFTGVM 304
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LRGSG+ WD+RK QPYD Y+ EFD+P+G +G+ + M+E RQSLRI+ Q +N+MP
Sbjct: 305 LRGSGVPWDIRKSQPYDAYDKVEFDVPVGVNGDCYDRYLCRMEEFRQSLRIIHQCLNQMP 364
Query: 226 GGEVRTDDMKISTPSRSEMK 245
G VR +D KI P R+ MK
Sbjct: 365 AGPVRVEDYKIMPPPRAAMK 384
Score = 327 (120.2 bits), Expect = 1.3e-38, Sum P(2) = 1.3e-38
Identities = 66/118 (55%), Positives = 81/118 (68%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
M+E RQSLRI+ Q +N+MP G VR +D KI P R+ MK GY VPP
Sbjct: 346 MEEFRQSLRIIHQCLNQMPAGPVRVEDYKIMPPPRAAMKENMEALIHHFLLYTKGYAVPP 405
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
G TY+A+EAPKGE GV+LVSDG+ +PYRCKI+APGFAHL ++I +G LAD VAII
Sbjct: 406 GETYSAIEAPKGEMGVFLVSDGSERPYRCKIRAPGFAHLGGFDQIARGHLLADAVAII 463
Score = 310 (114.2 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 58/65 (89%), Positives = 61/65 (93%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPH+GLLHRGTEKLIEYK+Y QALPYFDRLDYVSMM NEQCYSLAVEKLLNIE+P RAKY
Sbjct: 122 DPHVGLLHRGTEKLIEYKSYFQALPYFDRLDYVSMMTNEQCYSLAVEKLLNIEIPERAKY 181
Query: 370 IRVMF 374
IR MF
Sbjct: 182 IRTMF 186
Score = 102 (41.0 bits), Expect = 1.2e-75, Sum P(2) = 1.2e-75
Identities = 19/29 (65%), Positives = 23/29 (79%)
Query: 27 VEKQIRNMVINFGPQHPAAHGVLLLFAEI 55
V ++IR+ +NFGPQHPAAHGVL L EI
Sbjct: 85 VGRKIRHYTVNFGPQHPAAHGVLRLILEI 113
>UNIPROTKB|G4MQN1 [details] [associations]
symbol:MGG_09285 "Uncharacterized protein" species:242507
"Magnaporthe oryzae 70-15" [GO:0005575 "cellular_component"
evidence=ND] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0051287
GO:GO:0048038 EMBL:CM001231 GO:GO:0016651 KO:K03935
TIGRFAMs:TIGR01962 RefSeq:XP_003709930.1 ProteinModelPortal:G4MQN1
EnsemblFungi:MGG_09285T0 GeneID:2680209 KEGG:mgr:MGG_09285
Uniprot:G4MQN1
Length = 488
Score = 671 (241.3 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 122/200 (61%), Positives = 157/200 (78%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
+F EITR+LNH+M+V +HA+DVGA+TPF W FEEREK+MEFYER SGAR+HAAYVRPGGV
Sbjct: 198 MFGEITRVLNHLMSVLSHAMDVGALTPFLWGFEEREKLMEFYERVSGARLHAAYVRPGGV 257
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
DIP GLLDDIY + + F R+DE E+MLT+NR+WI R + VG+VSA++AL+ F+GVM
Sbjct: 258 HQDIPAGLLDDIYQWATQFGDRIDETEEMLTDNRIWINRLQGVGVVSAKEALDLSFTGVM 317
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LRGSG+ WD+RK PYD Y+ EFDIP+G +G+ + M+E RQSLRI+ Q +N+MP
Sbjct: 318 LRGSGVPWDIRKSSPYDAYDKVEFDIPVGLNGDCYDRYLCRMEEFRQSLRIIHQCLNQMP 377
Query: 226 GGEVRTDDMKISTPSRSEMK 245
G VR +D K+S P R+ MK
Sbjct: 378 AGPVRVEDYKVSPPPRAAMK 397
Score = 311 (114.5 bits), Expect = 1.5e-36, Sum P(2) = 1.5e-36
Identities = 63/118 (53%), Positives = 79/118 (66%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
M+E RQSLRI+ Q +N+MP G VR +D K+S P R+ MK GY VPP
Sbjct: 359 MEEFRQSLRIIHQCLNQMPAGPVRVEDYKVSPPPRAAMKENMEALIHHFLLYTKGYAVPP 418
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
G TY+ +EAPKGE GVY+VSDG+ +PYR I+APGFAHLA + + KG LAD VA+I
Sbjct: 419 GDTYSVIEAPKGEMGVYVVSDGSERPYRVHIRAPGFAHLAGFDHVCKGHLLADAVAVI 476
Score = 303 (111.7 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 56/65 (86%), Positives = 60/65 (92%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPH+GLLHRGTEKL EYKTY QALPYFDRLDYVSMM NEQC++LAVEKLLNIE+P RAKY
Sbjct: 135 DPHVGLLHRGTEKLCEYKTYLQALPYFDRLDYVSMMTNEQCFALAVEKLLNIEIPERAKY 194
Query: 370 IRVMF 374
IR MF
Sbjct: 195 IRTMF 199
Score = 104 (41.7 bits), Expect = 5.2e-75, Sum P(2) = 5.2e-75
Identities = 18/29 (62%), Positives = 24/29 (82%)
Query: 28 EKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
E++IR+ +NFGPQHPAAHGVL L E++
Sbjct: 99 ERKIRHYTVNFGPQHPAAHGVLRLILELS 127
>FB|FBgn0039331 [details] [associations]
symbol:CG11913 species:7227 "Drosophila melanogaster"
[GO:0005747 "mitochondrial respiratory chain complex I"
evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0003954 "NADH dehydrogenase activity"
evidence=ISS] [GO:0006120 "mitochondrial electron transport, NADH
to ubiquinone" evidence=ISS] [GO:0048038 "quinone binding"
evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA]
HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 EMBL:AE014297
GO:GO:0051287 GO:GO:0048038 GO:GO:0008137
GeneTree:ENSGT00390000009529 KO:K03935 TIGRFAMs:TIGR01962
RefSeq:NP_651392.2 UniGene:Dm.27613 ProteinModelPortal:Q9VBR4
SMR:Q9VBR4 STRING:Q9VBR4 EnsemblMetazoa:FBtr0273265 GeneID:43073
KEGG:dme:Dmel_CG11913 UCSC:CG11913-RB FlyBase:FBgn0039331
InParanoid:Q9VBR4 OMA:CKIRPAS OrthoDB:EOG4BCC34 PhylomeDB:Q9VBR4
GenomeRNAi:43073 NextBio:832082 ArrayExpress:Q9VBR4 Bgee:Q9VBR4
Uniprot:Q9VBR4
Length = 523
Score = 649 (233.5 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 114/200 (57%), Positives = 157/200 (78%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
+F+EI R+ NH MA+G+ LD GA+TP FWLFEEREK+ EF ERASGAR+HAAY+RPGGV
Sbjct: 233 MFSEIMRLTNHTMAIGSSVLDCGAITPLFWLFEEREKLYEFSERASGARLHAAYIRPGGV 292
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
A DIP+G L D+Y FI+ F+ RLDEVED++T+NR+W R +G++SA DALNYG +G +
Sbjct: 293 ASDIPLGFLHDLYQFINQFNERLDEVEDVVTDNRIWRMRNIGIGVISAHDALNYGCTGPV 352
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LR +G+KWDLRK QPYD Y+ +FD+ +G++G+ ++ M+EMR+S+ I++Q I+ MP
Sbjct: 353 LRATGVKWDLRKQQPYDAYDEMDFDVVVGSNGDCYDRYLVRMREMRESVNIIKQCIDAMP 412
Query: 226 GGEVRTDDMKISTPSRSEMK 245
GE++ DD+KI P RS+MK
Sbjct: 413 PGEIKVDDLKICPPQRSKMK 432
Score = 305 (112.4 bits), Expect = 1.4e-37, Sum P(2) = 1.4e-37
Identities = 60/121 (49%), Positives = 83/121 (68%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
++ M+EMR+S+ I++Q I+ MP GE++ DD+KI P RS+MK G+
Sbjct: 391 LVRMREMRESVNIIKQCIDAMPPGEIKVDDLKICPPQRSKMKEGMEDLIHHFKHFSQGFR 450
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
VPPG TY AVE+PKGEFG +L+SDG+S+PYRCKI+ +AHLA + K+ LAD+VAI
Sbjct: 451 VPPGQTYCAVESPKGEFGAFLISDGSSRPYRCKIRPASYAHLALMAKMAPAHLLADVVAI 510
Query: 309 I 309
I
Sbjct: 511 I 511
Score = 299 (110.3 bits), Expect = 5.4e-26, P = 5.4e-26
Identities = 66/101 (65%), Positives = 73/101 (72%)
Query: 276 KPYRCKIKAPGFAHLAALEKIGKGSFLA-DIVAIIDPHIGLLHRGTEKLIEYKTYTQALP 334
+ +R K+ G AH AA + L + V DPHIGLLHRGTEKLIEYKTYTQALP
Sbjct: 135 RTFRTKLINFGPAHPAAHGVLRMILELDNETVLNADPHIGLLHRGTEKLIEYKTYTQALP 194
Query: 335 YFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKYIRVMFT 375
YFDRLDYVS M NE Y LAVEKLLN+EVP RAKYIR MF+
Sbjct: 195 YFDRLDYVSCMANELAYCLAVEKLLNVEVPRRAKYIRTMFS 235
Score = 124 (48.7 bits), Expect = 8.5e-75, Sum P(2) = 8.5e-75
Identities = 27/62 (43%), Positives = 39/62 (62%)
Query: 2 KYVVLYPDKEETKWKIINWNDNLVP-VEKQIRNMVINFGPQHPAAHGVLLLFAEITR--I 58
+Y+V YP+ +E K K N+ +P V++ R +INFGP HPAAHGVL + E+ +
Sbjct: 108 QYIVWYPEGDEWK-KRPNFKGKQIPPVDRTFRTKLINFGPAHPAAHGVLRMILELDNETV 166
Query: 59 LN 60
LN
Sbjct: 167 LN 168
>CGD|CAL0003145 [details] [associations]
symbol:NUC2 species:5476 "Candida albicans" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 CGD:CAL0003145
GO:GO:0005886 GO:GO:0051287 GO:GO:0048038 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0016651 eggNOG:COG0649 HOGENOM:HOG000228264
KO:K03935 TIGRFAMs:TIGR01962 RefSeq:XP_720856.1 RefSeq:XP_721369.1
RefSeq:XP_888810.1 ProteinModelPortal:Q5AH07 STRING:Q5AH07
GeneID:3637030 GeneID:3637561 GeneID:3704115 KEGG:cal:CaO19.13884
KEGG:cal:CaO19.6531 KEGG:cal:CaO19_6531 Uniprot:Q5AH07
Length = 478
Score = 645 (232.1 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 125/200 (62%), Positives = 152/200 (76%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
LF EITRILNH M+V TH +DVG +TPF W FEEREK+MEFYER SGAR+H AY RPGGV
Sbjct: 188 LFGEITRILNHCMSVLTHIMDVGGLTPFLWGFEEREKLMEFYERVSGARLHTAYFRPGGV 247
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
+ D+P GLLDDIY + + F R+DEVE++ T+NR+W RT VG+VSAEDALNY SGVM
Sbjct: 248 SQDLPAGLLDDIYMWATQFGDRIDEVEELCTDNRIWKDRTIGVGVVSAEDALNYSLSGVM 307
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LRGSGI +D+RK QPYD Y+ +FDI +G +G+ +I M E RQSLRI+ Q IN +P
Sbjct: 308 LRGSGIPFDIRKSQPYDAYDLVDFDIAVGINGDCYDRYLIRMAEFRQSLRIIFQCINDIP 367
Query: 226 GGEVRTDDMKISTPSRSEMK 245
G V+ +D KIS PSRS MK
Sbjct: 368 EGPVKVEDYKISPPSRSLMK 387
Score = 322 (118.4 bits), Expect = 9.8e-39, Sum P(2) = 9.8e-39
Identities = 69/121 (57%), Positives = 82/121 (67%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
+I M E RQSLRI+ Q IN +P G V+ +D KIS PSRS MK GY
Sbjct: 346 LIRMAEFRQSLRIIFQCINDIPEGPVKVEDYKISPPSRSLMKEDMEALIHHFLLFTKGYA 405
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
VP G TYTA+EAPKGE VY+VSDG+ +PYRCKI+APGFAHL A + I +G+ LAD VAI
Sbjct: 406 VPQGETYTAIEAPKGEMAVYVVSDGSERPYRCKIRAPGFAHLGAFDHIARGNLLADAVAI 465
Query: 309 I 309
I
Sbjct: 466 I 466
Score = 286 (105.7 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 54/65 (83%), Positives = 59/65 (90%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPH+GLLHRGTEKLIE KTY QALPYFDRLDYVSMM NE ++LAVEKLLN+EVPLRAKY
Sbjct: 125 DPHVGLLHRGTEKLIESKTYMQALPYFDRLDYVSMMTNELVFALAVEKLLNVEVPLRAKY 184
Query: 370 IRVMF 374
IR +F
Sbjct: 185 IRTLF 189
Score = 110 (43.8 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 18 INWNDNLVP--VEKQ---IRNMVINFGPQHPAAHGVLLLFAEI 55
I W+ N P +EKQ IR+ INFGPQHPAAHGVL L E+
Sbjct: 74 ITWDKNDDPDRLEKQNTKIRHFTINFGPQHPAAHGVLRLILEL 116
>UNIPROTKB|Q5AH07 [details] [associations]
symbol:NUC2 "Potential mitochondrial Complex I, NUCM_49kd
subunit" species:237561 "Candida albicans SC5314" [GO:0005886
"plasma membrane" evidence=IDA] [GO:0016020 "membrane"
evidence=IDA] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 CGD:CAL0003145
GO:GO:0005886 GO:GO:0051287 GO:GO:0048038 EMBL:AACQ01000020
EMBL:AACQ01000016 GO:GO:0016651 eggNOG:COG0649 HOGENOM:HOG000228264
KO:K03935 TIGRFAMs:TIGR01962 RefSeq:XP_720856.1 RefSeq:XP_721369.1
RefSeq:XP_888810.1 ProteinModelPortal:Q5AH07 STRING:Q5AH07
GeneID:3637030 GeneID:3637561 GeneID:3704115 KEGG:cal:CaO19.13884
KEGG:cal:CaO19.6531 KEGG:cal:CaO19_6531 Uniprot:Q5AH07
Length = 478
Score = 645 (232.1 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 125/200 (62%), Positives = 152/200 (76%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
LF EITRILNH M+V TH +DVG +TPF W FEEREK+MEFYER SGAR+H AY RPGGV
Sbjct: 188 LFGEITRILNHCMSVLTHIMDVGGLTPFLWGFEEREKLMEFYERVSGARLHTAYFRPGGV 247
Query: 111 ALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVM 170
+ D+P GLLDDIY + + F R+DEVE++ T+NR+W RT VG+VSAEDALNY SGVM
Sbjct: 248 SQDLPAGLLDDIYMWATQFGDRIDEVEELCTDNRIWKDRTIGVGVVSAEDALNYSLSGVM 307
Query: 171 LRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMP 225
LRGSGI +D+RK QPYD Y+ +FDI +G +G+ +I M E RQSLRI+ Q IN +P
Sbjct: 308 LRGSGIPFDIRKSQPYDAYDLVDFDIAVGINGDCYDRYLIRMAEFRQSLRIIFQCINDIP 367
Query: 226 GGEVRTDDMKISTPSRSEMK 245
G V+ +D KIS PSRS MK
Sbjct: 368 EGPVKVEDYKISPPSRSLMK 387
Score = 322 (118.4 bits), Expect = 9.8e-39, Sum P(2) = 9.8e-39
Identities = 69/121 (57%), Positives = 82/121 (67%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
+I M E RQSLRI+ Q IN +P G V+ +D KIS PSRS MK GY
Sbjct: 346 LIRMAEFRQSLRIIFQCINDIPEGPVKVEDYKISPPSRSLMKEDMEALIHHFLLFTKGYA 405
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
VP G TYTA+EAPKGE VY+VSDG+ +PYRCKI+APGFAHL A + I +G+ LAD VAI
Sbjct: 406 VPQGETYTAIEAPKGEMAVYVVSDGSERPYRCKIRAPGFAHLGAFDHIARGNLLADAVAI 465
Query: 309 I 309
I
Sbjct: 466 I 466
Score = 286 (105.7 bits), Expect = 2.8e-34, Sum P(2) = 2.8e-34
Identities = 54/65 (83%), Positives = 59/65 (90%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPH+GLLHRGTEKLIE KTY QALPYFDRLDYVSMM NE ++LAVEKLLN+EVPLRAKY
Sbjct: 125 DPHVGLLHRGTEKLIESKTYMQALPYFDRLDYVSMMTNELVFALAVEKLLNVEVPLRAKY 184
Query: 370 IRVMF 374
IR +F
Sbjct: 185 IRTLF 189
Score = 110 (43.8 bits), Expect = 6.7e-73, Sum P(2) = 6.7e-73
Identities = 25/43 (58%), Positives = 29/43 (67%)
Query: 18 INWNDNLVP--VEKQ---IRNMVINFGPQHPAAHGVLLLFAEI 55
I W+ N P +EKQ IR+ INFGPQHPAAHGVL L E+
Sbjct: 74 ITWDKNDDPDRLEKQNTKIRHFTINFGPQHPAAHGVLRLILEL 116
>UNIPROTKB|Q0C1E4 [details] [associations]
symbol:nuoD "NADH-quinone oxidoreductase subunit D"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886 GO:GO:0051287
GO:GO:0006810 GO:GO:0048038 EMBL:CP000158 GenomeReviews:CP000158_GR
eggNOG:COG0649 HOGENOM:HOG000228264 OMA:QSNRIIK TIGRFAMs:TIGR01962
GO:GO:0050136 KO:K00333 ProtClustDB:PRK06075 RefSeq:YP_760449.1
STRING:Q0C1E4 GeneID:4287922 KEGG:hne:HNE_1745 PATRIC:32216317
BioCyc:HNEP228405:GI69-1773-MONOMER Uniprot:Q0C1E4
Length = 392
Score = 525 (189.9 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 103/216 (47%), Positives = 148/216 (68%)
Query: 39 GPQHPAAHGVL-LLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASG 97
G + P ++ ++++EI RI++H++ VGT +DVGA+TP W FEEREK+ FYERASG
Sbjct: 86 GVEVPRRASIIRVMYSEIGRIMSHLLNVGTGVMDVGALTPITWCFEEREKLCVFYERASG 145
Query: 98 ARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVS 157
+RMHAAY RPGGV D+P L+DDI + F +LD++E ++TENR++ QR D+G+V
Sbjct: 146 SRMHAAYFRPGGVHQDLPQRLIDDIATWCDQFPGKLDQIEGLVTENRIFKQRNVDIGVVD 205
Query: 158 AEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQ 212
L++GFSGVM+RGSG+ WDLR+ QPY+ Y +F +P+G HG+ V M EMR+
Sbjct: 206 QRTILDWGFSGVMVRGSGLAWDLRRSQPYECYSELDFKVPVGRHGDNYDRYVCRMDEMRE 265
Query: 213 SLRIVEQAINKMP--G-GEVRTDDMKISTPSRSEMK 245
S++I+ Q I+ M G G V K+S P R++MK
Sbjct: 266 SVKIILQCIDLMAKDGPGPVLLAGSKLSPPRRADMK 301
Score = 246 (91.7 bits), Expect = 5.6e-19, P = 5.6e-19
Identities = 46/72 (63%), Positives = 56/72 (77%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+IV +D HIGLLHRGTEKL+EYKTY Q +PYFDRLDY + M E + LA+EKLL +EV
Sbjct: 30 EIVTRVDSHIGLLHRGTEKLLEYKTYLQGMPYFDRLDYCAPMNQEHAWCLAIEKLLGVEV 89
Query: 364 PLRAKYIRVMFT 375
P RA IRVM++
Sbjct: 90 PRRASIIRVMYS 101
Score = 217 (81.4 bits), Expect = 1.6e-71, Sum P(2) = 1.6e-71
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 245 KGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLAD 304
+G+ VP G Y AVEAPKGEFGVYLV+DGT++PYR KI+APG+ HL A++ + KG LAD
Sbjct: 316 EGFHVPEGECYAAVEAPKGEFGVYLVADGTNRPYRAKIRAPGYPHLQAMDYLCKGHQLAD 375
Query: 305 IVAII 309
+ A++
Sbjct: 376 VSAVL 380
Score = 91 (37.1 bits), Expect = 3.8e-21, Sum P(2) = 3.8e-21
Identities = 18/36 (50%), Positives = 24/36 (66%)
Query: 32 RNMVINFGPQHPAAHGVLLLFAE-----ITRILNHI 62
R +NFGPQHPAAHGVL + + +TR+ +HI
Sbjct: 4 RKFTLNFGPQHPAAHGVLRMILDLDGEIVTRVDSHI 39
>TIGR_CMR|ECH_0616 [details] [associations]
symbol:ECH_0616 "NADH dehydrogenase I, D subunit"
species:205920 "Ehrlichia chaffeensis str. Arkansas" [GO:0050136
"NADH dehydrogenase (quinone) activity" evidence=ISS]
HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886
GO:GO:0051287 EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0006810
GO:GO:0048038 eggNOG:COG0649 HOGENOM:HOG000228264
TIGRFAMs:TIGR01962 HSSP:Q56220 GO:GO:0050136 KO:K00333
ProtClustDB:PRK06075 RefSeq:YP_507426.1 STRING:Q2GGK7 PRIDE:Q2GGK7
GeneID:3927439 KEGG:ech:ECH_0616 PATRIC:20576684 OMA:FLCRGHQ
BioCyc:ECHA205920:GJNR-618-MONOMER Uniprot:Q2GGK7
Length = 393
Score = 651 (234.2 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 116/201 (57%), Positives = 158/201 (78%)
Query: 50 LLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGG 109
++F E+TRILNH++ + + ALD+GAMTP W+FEEREK++ FYERASGAR H+AY+RPGG
Sbjct: 102 VIFCELTRILNHLLNISSQALDIGAMTPLLWMFEEREKILGFYERASGARFHSAYIRPGG 161
Query: 110 VALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGV 169
VA D+P L+DDI+ FI TF +D+V+++LTENR+W QR D+GIVS E AL++GFSG
Sbjct: 162 VAADVPDDLIDDIFKFIKTFPKFIDDVDELLTENRIWKQRNVDIGIVSKEQALDWGFSGP 221
Query: 170 MLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKM 224
MLR GI WDLRK QPY+ YE+ EF+IPIG G+ ++ M E+RQS++++EQ +N++
Sbjct: 222 MLRACGIPWDLRKSQPYEIYEDLEFEIPIGKKGDCYDRYLVRMAEIRQSIKLLEQCLNRL 281
Query: 225 PGGEVRTDDMKISTPSRSEMK 245
P G ++TDD KI+ P RSEMK
Sbjct: 282 PNGPIKTDDRKIAPPKRSEMK 302
Score = 343 (125.8 bits), Expect = 8.3e-39, Sum P(2) = 8.3e-39
Identities = 67/121 (55%), Positives = 88/121 (72%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
++ M E+RQS++++EQ +N++P G ++TDD KI+ P RSEMK GY
Sbjct: 261 LVRMAEIRQSIKLLEQCLNRLPNGPIKTDDRKIAPPKRSEMKESMEALIHHFKLYSEGYS 320
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
VP G TY AVEAPKGEFGVY+VSDGT+KPYRC+I+APGFAHL A++ + KG LAD+ AI
Sbjct: 321 VPIGETYMAVEAPKGEFGVYIVSDGTNKPYRCRIRAPGFAHLQAIDMMAKGHMLADLTAI 380
Query: 309 I 309
I
Sbjct: 381 I 381
Score = 295 (108.9 bits), Expect = 9.0e-34, Sum P(2) = 9.0e-34
Identities = 54/71 (76%), Positives = 61/71 (85%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+++ IDPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVS MC E YSL VEKLL E+
Sbjct: 34 EVIERIDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSPMCQEHAYSLCVEKLLKCEI 93
Query: 364 PLRAKYIRVMF 374
P+RAKY+RV+F
Sbjct: 94 PIRAKYLRVIF 104
Score = 88 (36.0 bits), Expect = 3.3e-71, Sum P(2) = 3.3e-71
Identities = 16/26 (61%), Positives = 20/26 (76%)
Query: 30 QIRNMVINFGPQHPAAHGVLLLFAEI 55
+I M +NFGPQHPAAHGV+ L E+
Sbjct: 6 KITPMTLNFGPQHPAAHGVMRLVLEM 31
>TIGR_CMR|NSE_0566 [details] [associations]
symbol:NSE_0566 "NADH dehydrogenase I, D subunit"
species:222891 "Neorickettsia sennetsu str. Miyayama" [GO:0050136
"NADH dehydrogenase (quinone) activity" evidence=ISS]
HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886
GO:GO:0051287 GO:GO:0006810 GO:GO:0048038 EMBL:CP000237
GenomeReviews:CP000237_GR eggNOG:COG0649 HOGENOM:HOG000228264
OMA:QSNRIIK TIGRFAMs:TIGR01962 HSSP:Q56220 GO:GO:0050136 KO:K00333
ProtClustDB:PRK06075 RefSeq:YP_506448.1 ProteinModelPortal:Q2GDJ8
STRING:Q2GDJ8 GeneID:3931446 KEGG:nse:NSE_0566 PATRIC:22681175
BioCyc:NSEN222891:GHFU-584-MONOMER Uniprot:Q2GDJ8
Length = 388
Score = 602 (217.0 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 113/208 (54%), Positives = 157/208 (75%)
Query: 43 PAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHA 102
P A + ++F EITRILNH++ V THALDVGAM P FW+FEEREKM+ FYE+ASGAR HA
Sbjct: 90 PRAQYLRVIFVEITRILNHLLNVTTHALDVGAMNPLFWMFEEREKMLSFYEKASGARFHA 149
Query: 103 AYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDAL 162
AY+RPGG+A DIP GL ++I F+ +F+ +LD+V D+LT+N ++ QR D+G VS +A+
Sbjct: 150 AYIRPGGLAADIPDGLDEEIMSFLESFTHKLDDVADVLTDNPIFKQRLVDIGKVSKREAV 209
Query: 163 NYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIV 217
GFSG +LR SG+ WDLRK QPY+ YE+ +F IP+G+ G+ ++ M EM +S++I+
Sbjct: 210 ALGFSGPVLRASGVPWDLRKSQPYEVYESLDFAIPVGSCGDSYDRYLVRMAEMYESVKII 269
Query: 218 EQAINKMPGGEVRTDDMKISTPSRSEMK 245
+Q I+K+P G V DD K++ PSR+EMK
Sbjct: 270 KQCIDKLPEGPVVVDDRKVAPPSRAEMK 297
Score = 307 (113.1 bits), Expect = 2.1e-34, Sum P(2) = 2.1e-34
Identities = 62/121 (51%), Positives = 84/121 (69%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
++ M EM +S++I++Q I+K+P G V DD K++ PSR+EMK GY
Sbjct: 256 LVRMAEMYESVKIIKQCIDKLPEGPVVVDDRKVAPPSRAEMKTSMEALIHHFKLYSEGYH 315
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
VP G TY AVE+PKGEFGVY+VSDGT+KPYRC+I+APGF HL AL+ + + LAD+ AI
Sbjct: 316 VPEGETYFAVESPKGEFGVYIVSDGTNKPYRCRIRAPGFVHLQALDTLSRKHLLADVPAI 375
Query: 309 I 309
+
Sbjct: 376 L 376
Score = 263 (97.6 bits), Expect = 5.4e-27, Sum P(2) = 5.4e-27
Identities = 51/71 (71%), Positives = 57/71 (80%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+ V +DPHIG LHRGTEKLIE+KTY QALPYFDRLDYVS M E YSL VEKLL I V
Sbjct: 29 ETVERLDPHIGFLHRGTEKLIEHKTYLQALPYFDRLDYVSPMAQEHAYSLCVEKLLGITV 88
Query: 364 PLRAKYIRVMF 374
P RA+Y+RV+F
Sbjct: 89 PPRAQYLRVIF 99
Score = 82 (33.9 bits), Expect = 2.0e-65, Sum P(2) = 2.0e-65
Identities = 14/20 (70%), Positives = 17/20 (85%)
Query: 36 INFGPQHPAAHGVLLLFAEI 55
+NFGPQHPAAHGVL L ++
Sbjct: 7 LNFGPQHPAAHGVLRLIMQL 26
>TIGR_CMR|APH_0732 [details] [associations]
symbol:APH_0732 "NADH dehydrogenase I, D subunit"
species:212042 "Anaplasma phagocytophilum HZ" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886 GO:GO:0051287
GO:GO:0006810 GO:GO:0048038 EMBL:CP000235 GenomeReviews:CP000235_GR
eggNOG:COG0649 HOGENOM:HOG000228264 OMA:QSNRIIK TIGRFAMs:TIGR01962
HSSP:Q56220 GO:GO:0050136 RefSeq:YP_505312.1
ProteinModelPortal:Q2GJY9 STRING:Q2GJY9 GeneID:3930545
KEGG:aph:APH_0732 PATRIC:20950154 KO:K00333 ProtClustDB:PRK06075
BioCyc:APHA212042:GHPM-749-MONOMER Uniprot:Q2GJY9
Length = 395
Score = 586 (211.3 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 106/201 (52%), Positives = 148/201 (73%)
Query: 50 LLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGG 109
++F E+TR+LNH++ V ALD GA TP W+FEEREK++ FYERASGAR H+AY+RPGG
Sbjct: 104 VIFCELTRLLNHLLNVACQALDSGATTPLLWIFEEREKILSFYERASGARFHSAYIRPGG 163
Query: 110 VALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGV 169
+A D+P GLLDDI+ F + F LD V+D+LTEN +W QR ++G V+ + AL++GFSG
Sbjct: 164 LAADVPDGLLDDIHEFTNYFPKLLDSVDDLLTENSIWKQRNVEIGKVTKQQALDWGFSGP 223
Query: 170 MLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKM 224
MLR GI WDLRK QPY+ Y+ +F +P+G++G+ ++ M E+R+SL I+EQ + +
Sbjct: 224 MLRACGIPWDLRKSQPYEIYDILDFKVPVGSNGDCYDRYLVRMAEIRESLYILEQCLRDI 283
Query: 225 PGGEVRTDDMKISTPSRSEMK 245
P G V+TDD KI+ P R E+K
Sbjct: 284 PSGPVKTDDRKIAPPKREELK 304
Score = 310 (114.2 bits), Expect = 1.5e-35, Sum P(2) = 1.5e-35
Identities = 62/121 (51%), Positives = 82/121 (67%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
++ M E+R+SL I+EQ + +P G V+TDD KI+ P R E+K GY
Sbjct: 263 LVRMAEIRESLYILEQCLRDIPSGPVKTDDRKIAPPKREELKYSMEALIHHFKLFSEGYK 322
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
VP G Y AVEAPKGEFGVY+VSDGT+KPYRC+I++PGFAHL A++ + +G LAD+ I
Sbjct: 323 VPEGEAYAAVEAPKGEFGVYIVSDGTNKPYRCRIRSPGFAHLQAIDAMARGHMLADLPVI 382
Query: 309 I 309
I
Sbjct: 383 I 383
Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
Identities = 61/104 (58%), Positives = 71/104 (68%)
Query: 271 SDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAIIDPHIGLLHRGTEKLIEYKTYT 330
SDG +KP A + I + S +++ IDPHIGLLHRGTEKLIEYKTY
Sbjct: 5 SDGYAKPMTINFGPQHPAAHGVMRLILEMS--GEVIERIDPHIGLLHRGTEKLIEYKTYL 62
Query: 331 QALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKYIRVMF 374
QALPYFDRLDYVS M E YSL VE+LL EVP+RAKY+RV+F
Sbjct: 63 QALPYFDRLDYVSPMSQEHAYSLCVERLLGCEVPIRAKYLRVIF 106
Score = 90 (36.7 bits), Expect = 1.4e-64, Sum P(2) = 1.4e-64
Identities = 16/23 (69%), Positives = 19/23 (82%)
Query: 34 MVINFGPQHPAAHGVLLLFAEIT 56
M INFGPQHPAAHGV+ L E++
Sbjct: 12 MTINFGPQHPAAHGVMRLILEMS 34
>UNIPROTKB|Q2F990 [details] [associations]
symbol:nad7 "NADH dehydrogenase subunit 7" species:39946
"Oryza sativa Indica Group" [GO:0005739 "mitochondrion"
evidence=IC] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0005739
GO:GO:0051287 GO:GO:0048038 GO:GO:0016651 EMBL:DQ167399
TIGRFAMs:TIGR01962 EMBL:JN861111 EMBL:JN861112 EMBL:JF281153
EMBL:JF281154 RefSeq:YP_514643.1 ProteinModelPortal:Q2F990
PRIDE:Q2F990 GeneID:3950739 Gramene:Q2F990 Uniprot:Q2F990
Length = 394
Score = 596 (214.9 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 111/206 (53%), Positives = 149/206 (72%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAY 104
A + +LF EITRI NH +A THA+DVGA TPF W FEEREK++EFYER GARMHA++
Sbjct: 98 AQYIRVLFCEITRISNHSLASTTHAMDVGASTPFLWAFEEREKLLEFYERVPGARMHASF 157
Query: 105 VRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNY 164
+RPGGVA D+P+GL DI F++R+DE+E+M T NR+W QR D+G V+A+ A ++
Sbjct: 158 IRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEEMSTGNRIWKQRLVDIGTVTAQQAKDW 217
Query: 165 GFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQ 219
GFSGVMLRG G+ WD R+ PYD ++ + D+P+GT G+ I ++EMRQS+RI+ Q
Sbjct: 218 GFSGVMLRGPGVCWDSRRAAPYDVHDQSDLDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQ 277
Query: 220 AINKMPGGEVRTDDMKISTPSRSEMK 245
N+MP G ++ DD K+ PSRS MK
Sbjct: 278 CPNQMPSGMIKADDRKLCPPSRSRMK 303
Score = 296 (109.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 62/120 (51%), Positives = 81/120 (67%)
Query: 205 IGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPV 249
I ++EMRQS+RI+ Q N+MP G ++ DD K+ PSRS MK G+ V
Sbjct: 263 IRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMESSIHHFELYTEGFSV 322
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
P +TYTAVEAPKGEFGV+LVS+G+++PYRCKI+APGFAH L+ + K AD+V II
Sbjct: 323 PAPSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHSQGLDSMSKHHMPADVVTII 382
Score = 265 (98.3 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 51/71 (71%), Positives = 58/71 (81%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V +PHIG LHRGTEKLIEYKTY QALPYFDR DYVS M E +S AVE+LLN EV
Sbjct: 35 EVVERAEPHIGSLHRGTEKLIEYKTYLQALPYFDRSDYVSTMAQEHAHSSAVERLLNCEV 94
Query: 364 PLRAKYIRVMF 374
PLRA+YIRV+F
Sbjct: 95 PLRAQYIRVLF 105
Score = 78 (32.5 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 30 QIRNMVINFGPQHPAAHGV 48
QI+N N GPQHPAAHGV
Sbjct: 7 QIKNFTSNSGPQHPAAHGV 25
>UNIPROTKB|Q8HCQ3 [details] [associations]
symbol:nad7 "NADH dehydrogenase subunit 7" species:39947
"Oryza sativa Japonica Group" [GO:0005739 "mitochondrion"
evidence=IC] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0005739
GO:GO:0051287 GO:GO:0048038 GO:GO:0016651 EMBL:BA000029
GenomeReviews:BA000029_GR EMBL:DQ167807 EMBL:DQ167400
eggNOG:COG0649 KO:K03935 TIGRFAMs:TIGR01962 RefSeq:YP_002000562.1
STRING:Q8HCQ3 GeneID:6450198 KEGG:osa:6450198 Uniprot:Q8HCQ3
Length = 394
Score = 596 (214.9 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 111/206 (53%), Positives = 149/206 (72%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAY 104
A + +LF EITRI NH +A THA+DVGA TPF W FEEREK++EFYER GARMHA++
Sbjct: 98 AQYIRVLFCEITRISNHSLASTTHAMDVGASTPFLWAFEEREKLLEFYERVPGARMHASF 157
Query: 105 VRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNY 164
+RPGGVA D+P+GL DI F++R+DE+E+M T NR+W QR D+G V+A+ A ++
Sbjct: 158 IRPGGVAQDLPLGLCRDIDSSTQQFASRIDELEEMSTGNRIWKQRLVDIGTVTAQQAKDW 217
Query: 165 GFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQ 219
GFSGVMLRG G+ WD R+ PYD ++ + D+P+GT G+ I ++EMRQS+RI+ Q
Sbjct: 218 GFSGVMLRGPGVCWDSRRAAPYDVHDQSDLDVPVGTRGDRYDRYCIRIEEMRQSVRIIVQ 277
Query: 220 AINKMPGGEVRTDDMKISTPSRSEMK 245
N+MP G ++ DD K+ PSRS MK
Sbjct: 278 CPNQMPSGMIKADDRKLCPPSRSRMK 303
Score = 296 (109.3 bits), Expect = 7.9e-33, Sum P(2) = 7.9e-33
Identities = 62/120 (51%), Positives = 81/120 (67%)
Query: 205 IGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPV 249
I ++EMRQS+RI+ Q N+MP G ++ DD K+ PSRS MK G+ V
Sbjct: 263 IRIEEMRQSVRIIVQCPNQMPSGMIKADDRKLCPPSRSRMKLSMESSIHHFELYTEGFSV 322
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
P +TYTAVEAPKGEFGV+LVS+G+++PYRCKI+APGFAH L+ + K AD+V II
Sbjct: 323 PAPSTYTAVEAPKGEFGVFLVSNGSNRPYRCKIRAPGFAHSQGLDSMSKHHMPADVVTII 382
Score = 265 (98.3 bits), Expect = 8.4e-27, Sum P(2) = 8.4e-27
Identities = 51/71 (71%), Positives = 58/71 (81%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V +PHIG LHRGTEKLIEYKTY QALPYFDR DYVS M E +S AVE+LLN EV
Sbjct: 35 EVVERAEPHIGSLHRGTEKLIEYKTYLQALPYFDRSDYVSTMAQEHAHSSAVERLLNCEV 94
Query: 364 PLRAKYIRVMF 374
PLRA+YIRV+F
Sbjct: 95 PLRAQYIRVLF 105
Score = 78 (32.5 bits), Expect = 2.3e-64, Sum P(2) = 2.3e-64
Identities = 14/19 (73%), Positives = 15/19 (78%)
Query: 30 QIRNMVINFGPQHPAAHGV 48
QI+N N GPQHPAAHGV
Sbjct: 7 QIKNFTSNSGPQHPAAHGV 25
>UNIPROTKB|B7Z9L2 [details] [associations]
symbol:NDUFS2 "cDNA, FLJ78876, highly similar to
NADH-ubiquinone oxidoreductase 49 kDa subunit, mitochondrial (EC
1.6.5.3)" species:9606 "Homo sapiens" [GO:0016651 "oxidoreductase
activity, acting on NAD(P)H" evidence=IEA] [GO:0048038 "quinone
binding" evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA]
InterPro:IPR001135 InterPro:IPR014029 Pfam:PF00346 PROSITE:PS00535
GO:GO:0051287 GO:GO:0048038 EMBL:AL590714 GO:GO:0016651
UniGene:Hs.173611 HGNC:HGNC:7708 ChiTaRS:NDUFS2 EMBL:AK315977
IPI:IPI01014460 SMR:B7Z9L2 STRING:B7Z9L2 Ensembl:ENST00000476409
UCSC:uc010pki.2 Uniprot:B7Z9L2
Length = 231
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 117/169 (69%), Positives = 141/169 (83%)
Query: 35 VINFGPQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYER 94
++N P P A + +LF EITR+LNHIMAV THALD+GAMTPFFWLFEEREKM EFYER
Sbjct: 60 LLNIRPP-PRAQWIRVLFGEITRLLNHIMAVTTHALDLGAMTPFFWLFEEREKMFEFYER 118
Query: 95 ASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVG 154
SGARMHAAY+RPGGV D+P+GL+DDIY F FS RLDE+E++LT NR+W RT D+G
Sbjct: 119 VSGARMHAAYIRPGGVHQDLPLGLMDDIYQFSKNFSLRLDELEELLTNNRIWRNRTIDIG 178
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN 203
+V+AE+ALNYGFSGVMLRGSGI+WDLRK QPYD Y+ EFD+P+G+ G+
Sbjct: 179 VVTAEEALNYGFSGVMLRGSGIQWDLRKTQPYDVYDQVEFDVPVGSRGD 227
Score = 301 (111.0 bits), Expect = 9.4e-27, P = 9.4e-27
Identities = 58/71 (81%), Positives = 63/71 (88%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
++V DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ YSLAVEKLLNI
Sbjct: 6 EMVRKCDPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYSLAVEKLLNIRP 65
Query: 364 PLRAKYIRVMF 374
P RA++IRV+F
Sbjct: 66 PPRAQWIRVLF 76
>TIGR_CMR|SPO_2782 [details] [associations]
symbol:SPO_2782 "NADH dehydrogenase I, D subunit"
species:246200 "Ruegeria pomeroyi DSS-3" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886 GO:GO:0051287
EMBL:CP000031 GenomeReviews:CP000031_GR GO:GO:0006810 GO:GO:0048038
eggNOG:COG0649 HOGENOM:HOG000228264 OMA:QSNRIIK TIGRFAMs:TIGR01962
HSSP:Q56220 GO:GO:0050136 KO:K00333 ProtClustDB:PRK06075
RefSeq:YP_167989.1 ProteinModelPortal:Q5LPR7 GeneID:3193679
KEGG:sil:SPO2782 PATRIC:23378983 Uniprot:Q5LPR7
Length = 405
Score = 552 (199.4 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 109/205 (53%), Positives = 148/205 (72%)
Query: 48 VLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRP 107
+ +L++EI RILNH++ V T A+DVGA+TP W FEEREK+M FYERA GAR+HAAY RP
Sbjct: 111 IRVLYSEIGRILNHLLNVTTQAMDVGALTPPLWGFEEREKLMVFYERACGARLHAAYFRP 170
Query: 108 GGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFS 167
GGV D+P LLDDI + TF LD+++ +LTENR++ QR D+G+VS E+ L YGFS
Sbjct: 171 GGVHQDLPDALLDDIEAWSHTFPNVLDDIDGLLTENRIFKQRNCDIGVVSEEEILQYGFS 230
Query: 168 GVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAIN 222
GVM+RGSG+ WDLR+ QPY+ Y+ FEF +P+G +G+ + M+EMRQS+ I+ QAI
Sbjct: 231 GVMVRGSGLAWDLRRAQPYECYDEFEFQVPVGKNGDCYDRYLCRMEEMRQSISIIRQAIA 290
Query: 223 KMPG--GEVRTDDMKISTPSRSEMK 245
K+ G+V K++ P R +MK
Sbjct: 291 KLRDCPGDVLARG-KLTPPKRGDMK 314
Score = 262 (97.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 60/119 (50%), Positives = 79/119 (66%)
Query: 207 MKEMRQSLRIVEQAINKM---PG-----GEV---RTDDMKISTPS-----RSEMKGYPVP 250
M+EMRQS+ I+ QAI K+ PG G++ + DMK S S + +G+ VP
Sbjct: 275 MEEMRQSISIIRQAIAKLRDCPGDVLARGKLTPPKRGDMKTSMESLIHHFKLYTEGFHVP 334
Query: 251 PGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
G Y AVEAPKGEFGVYLV+DGT+KPYR KI+APG+ HL A++ + +G LAD+ AII
Sbjct: 335 AGEVYAAVEAPKGEFGVYLVADGTNKPYRSKIRAPGYLHLQAMDHVARGHQLADVAAII 393
Score = 233 (87.1 bits), Expect = 2.2e-24, Sum P(2) = 2.2e-24
Identities = 45/72 (62%), Positives = 55/72 (76%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+IV DPHIGLLHRGTEKL+E +TY Q LPYFDRLDYV+ M E + LA+EKL +EV
Sbjct: 45 EIVERCDPHIGLLHRGTEKLMESRTYLQNLPYFDRLDYVAPMNQEHAWCLAIEKLTGVEV 104
Query: 364 PLRAKYIRVMFT 375
P RA IRV+++
Sbjct: 105 PRRASLIRVLYS 116
Score = 103 (41.3 bits), Expect = 2.3e-62, Sum P(2) = 2.3e-62
Identities = 19/28 (67%), Positives = 23/28 (82%)
Query: 28 EKQIRNMVINFGPQHPAAHGVLLLFAEI 55
E++IRN INFGPQHPAAHGVL + E+
Sbjct: 15 EQKIRNFNINFGPQHPAAHGVLRMVLEL 42
>DICTYBASE|DDB_G0294030 [details] [associations]
symbol:nad7 "NADH dehydrogenase (ubiquinone) Fe-S
protein 2" species:44689 "Dictyostelium discoideum" [GO:0005515
"protein binding" evidence=IPI] [GO:0051287 "NAD binding"
evidence=IEA] [GO:0048038 "quinone binding" evidence=IEA]
[GO:0016651 "oxidoreductase activity, acting on NAD(P)H"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0070469 "respiratory chain"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 dictyBase:DDB_G0294030 GO:GO:0005739
GO:GO:0051287 GO:GO:0022900 GO:GO:0048038 GO:GO:0070469
GO:GO:0008137 EMBL:AB000109 GenomeReviews:AB000109_GR EMBL:D21196
eggNOG:COG0649 KO:K03935 OMA:QSNRIIK TIGRFAMs:TIGR01962 PIR:T43763
RefSeq:NP_050085.1 ProteinModelPortal:Q23883 STRING:Q23883
GeneID:2193913 KEGG:ddi:DidioMp18 Uniprot:Q23883
Length = 406
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 120/211 (56%), Positives = 158/211 (74%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ A + +LF+EITR+LNHIMA THA+DVGA+TPF W FEEREK+MEFYER SGAR
Sbjct: 107 PQR--AKVIRVLFSEITRVLNHIMATTTHAMDVGALTPFLWAFEEREKLMEFYERVSGAR 164
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAE 159
MHAAY+RPGGVA D+P+ + +DIY F+ + RL+E+EDML NR+W QR D+GIVSAE
Sbjct: 165 MHAAYIRPGGVAFDLPMNISEDIYKFVIQYRKRLEEIEDMLINNRIWKQRLVDIGIVSAE 224
Query: 160 DALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSL 214
+ALNYGF+G +LRG+GI +D+RK PYD Y+ ++F I IG N +I MKEM QSL
Sbjct: 225 EALNYGFTGPLLRGAGIVYDIRKNYPYDDYDKYDFKIIIGEENNSYTRFIIRMKEMYQSL 284
Query: 215 RIVEQAINKMPGGEVRTDDMKISTPSRSEMK 245
I+EQA+N + G ++ + + I+ P R+ +K
Sbjct: 285 SIIEQALNNLRPGLIKLEGVNITAPDRAFVK 315
Score = 257 (95.5 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 54/121 (44%), Positives = 75/121 (61%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYP 248
+I MKEM QSL I+EQA+N + G ++ + + I+ P R+ +K G+
Sbjct: 274 IIRMKEMYQSLSIIEQALNNLRPGLIKLEGVNITAPDRAFVKKDMESCINHFKFFSEGFI 333
Query: 249 VPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
+P YT VEAPKGEFG+YL ++ T+KPYRC+IKAPGF HL L + K LAD+V +
Sbjct: 334 IPANENYTIVEAPKGEFGIYLNANDTAKPYRCRIKAPGFLHLQGLNMMSKDHLLADVVTL 393
Query: 309 I 309
I
Sbjct: 394 I 394
Score = 248 (92.4 bits), Expect = 3.8e-19, P = 3.8e-19
Identities = 51/76 (67%), Positives = 59/76 (77%)
Query: 306 VAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKL------L 359
V ++PHIGLLHRGTEKLIE KTYTQALPYFDRLDYVSM E YSLAVE+L +
Sbjct: 43 VVRVEPHIGLLHRGTEKLIEGKTYTQALPYFDRLDYVSMNVQEHAYSLAVERLYLDSLDI 102
Query: 360 NIEVPLRAKYIRVMFT 375
+E+P RAK IRV+F+
Sbjct: 103 ELEIPQRAKVIRVLFS 118
Score = 109 (43.4 bits), Expect = 1.9e-28, Sum P(2) = 1.9e-28
Identities = 33/96 (34%), Positives = 46/96 (47%)
Query: 29 KQIRNMVINFGPQHPAAHGVLLLFAE-----ITRILNHIMAV--GTHALDVG-AMTPFFW 80
K ++N +NFGPQHPAAHGVL L E + R+ HI + GT L G T
Sbjct: 12 KVMKNFTLNFGPQHPAAHGVLRLIVELESENVVRVEPHIGLLHRGTEKLIEGKTYTQALP 71
Query: 81 LFEEREKM-MEFYERASGARMHAAYVRPGGVALDIP 115
F+ + + M E A + Y+ + L+IP
Sbjct: 72 YFDRLDYVSMNVQEHAYSLAVERLYLDSLDIELEIP 107
>UNIPROTKB|P0C335 [details] [associations]
symbol:ndhH "NAD(P)H-quinone oxidoreductase subunit H,
chloroplastic" species:4530 "Oryza sativa" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0009536
GO:GO:0051287 GO:GO:0006810 GO:GO:0048038 EMBL:AY522331
GO:GO:0009535 GO:GO:0016651 PIR:JQ0285 RefSeq:NP_039440.1
ProteinModelPortal:P0C335 GeneID:3131485 KEGG:osa:3131485
Gramene:P0C335 Genevestigator:P0C335 Uniprot:P0C335
Length = 393
Score = 400 (145.9 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 77/193 (39%), Positives = 125/193 (64%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ + V++L E++RI +H++ +G D+GA TPFF++F ERE + + +E A+G R
Sbjct: 95 PQRASYIRVIML--ELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMR 152
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAE 159
M Y R GGVA D+P G +D F F + E + ++T+N ++++R + VG +S E
Sbjct: 153 MMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGE 212
Query: 160 DALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSL 214
+A+N+G SG MLR SGI+WDLRKV Y+ Y F++ + G+ ++ + EMR+S+
Sbjct: 213 EAVNWGLSGPMLRASGIQWDLRKVDLYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESI 272
Query: 215 RIVEQAINKMPGG 227
+I++QA+ K+PGG
Sbjct: 273 KIIQQAVEKIPGG 285
Score = 177 (67.4 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 262 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 321
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 322 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 381
Score = 144 (55.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
+P +G LHRG EK+ E +T Q LPY R DY++ M E A E L NI++P RA Y
Sbjct: 41 EPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASY 100
Query: 370 IRVM 373
IRV+
Sbjct: 101 IRVI 104
Score = 75 (31.5 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
M++N GPQHP+ HGVL L +
Sbjct: 11 MIVNMGPQHPSMHGVLRLIVTL 32
>UNIPROTKB|P0C336 [details] [associations]
symbol:ndhH "NAD(P)H-quinone oxidoreductase subunit H,
chloroplastic" species:39946 "Oryza sativa Indica Group"
[GO:0009536 "plastid" evidence=IC] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0009536 GO:GO:0051287
GO:GO:0006810 GO:GO:0048038 EMBL:AY522329 GO:GO:0009535
GO:GO:0016651 ProtClustDB:CHL00017 RefSeq:YP_654248.1
RefSeq:YP_654257.2 ProteinModelPortal:P0C336 PRIDE:P0C336
GeneID:4126874 GeneID:4126877 Gramene:P0C336 Uniprot:P0C336
Length = 393
Score = 400 (145.9 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 77/193 (39%), Positives = 125/193 (64%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ + V++L E++RI +H++ +G D+GA TPFF++F ERE + + +E A+G R
Sbjct: 95 PQRASYIRVIML--ELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMR 152
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAE 159
M Y R GGVA D+P G +D F F + E + ++T+N ++++R + VG +S E
Sbjct: 153 MMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGE 212
Query: 160 DALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSL 214
+A+N+G SG MLR SGI+WDLRKV Y+ Y F++ + G+ ++ + EMR+S+
Sbjct: 213 EAVNWGLSGPMLRASGIQWDLRKVDLYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESI 272
Query: 215 RIVEQAINKMPGG 227
+I++QA+ K+PGG
Sbjct: 273 KIIQQAVEKIPGG 285
Score = 177 (67.4 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 262 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 321
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 322 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 381
Score = 144 (55.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
+P +G LHRG EK+ E +T Q LPY R DY++ M E A E L NI++P RA Y
Sbjct: 41 EPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASY 100
Query: 370 IRVM 373
IRV+
Sbjct: 101 IRVI 104
Score = 75 (31.5 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
M++N GPQHP+ HGVL L +
Sbjct: 11 MIVNMGPQHPSMHGVLRLIVTL 32
>UNIPROTKB|P0C337 [details] [associations]
symbol:ndhH "NAD(P)H-quinone oxidoreductase subunit H,
chloroplastic" species:39947 "Oryza sativa Japonica Group"
[GO:0009536 "plastid" evidence=IC] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0009536 GO:GO:0051287
GO:GO:0006810 GO:GO:0048038 EMBL:X15901 EMBL:AY522330
GenomeReviews:AY522330_GR GO:GO:0009535 GO:GO:0016651
ProtClustDB:CHL00017 RefSeq:NP_039440.1 GeneID:3131485
KEGG:osa:3131485 PIR:JQ0295 RefSeq:NP_039450.1
ProteinModelPortal:P0C337 STRING:P0C337
EnsemblPlants:LOC_Osp1g00970.1 GeneID:3131489 KEGG:osa:3131489
Gramene:P0C337 eggNOG:COG0649 KO:K05579 OMA:DSTIEAR Uniprot:P0C337
Length = 393
Score = 400 (145.9 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 77/193 (39%), Positives = 125/193 (64%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ + V++L E++RI +H++ +G D+GA TPFF++F ERE + + +E A+G R
Sbjct: 95 PQRASYIRVIML--ELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMR 152
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAE 159
M Y R GGVA D+P G +D F F + E + ++T+N ++++R + VG +S E
Sbjct: 153 MMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGE 212
Query: 160 DALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSL 214
+A+N+G SG MLR SGI+WDLRKV Y+ Y F++ + G+ ++ + EMR+S+
Sbjct: 213 EAVNWGLSGPMLRASGIQWDLRKVDLYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESI 272
Query: 215 RIVEQAINKMPGG 227
+I++QA+ K+PGG
Sbjct: 273 KIIQQAVEKIPGG 285
Score = 177 (67.4 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 262 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 321
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 322 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 381
Score = 144 (55.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
+P +G LHRG EK+ E +T Q LPY R DY++ M E A E L NI++P RA Y
Sbjct: 41 EPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASY 100
Query: 370 IRVM 373
IRV+
Sbjct: 101 IRVI 104
Score = 75 (31.5 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
M++N GPQHP+ HGVL L +
Sbjct: 11 MIVNMGPQHPSMHGVLRLIVTL 32
>UNIPROTKB|Q6ENA1 [details] [associations]
symbol:ndhH "NAD(P)H-quinone oxidoreductase subunit H,
chloroplastic" species:4536 "Oryza nivara" [GO:0009536 "plastid"
evidence=IC] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0009536
GO:GO:0051287 GO:GO:0006810 GO:GO:0048038 GO:GO:0009535
GO:GO:0016651 EMBL:AP006728 RefSeq:YP_052811.1 RefSeq:YP_052821.1
ProteinModelPortal:Q6ENA1 GeneID:2885916 GeneID:2885920
Gramene:Q6ENA1 ProtClustDB:CHL00017 Uniprot:Q6ENA1
Length = 393
Score = 400 (145.9 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 77/193 (39%), Positives = 125/193 (64%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ + V++L E++RI +H++ +G D+GA TPFF++F ERE + + +E A+G R
Sbjct: 95 PQRASYIRVIML--ELSRIASHLLWLGPFMADLGAQTPFFYIFRERELIYDLFEAATGMR 152
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAE 159
M Y R GGVA D+P G +D F F + E + ++T+N ++++R + VG +S E
Sbjct: 153 MMHNYFRIGGVAADLPYGWIDKCLDFCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGE 212
Query: 160 DALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSL 214
+A+N+G SG MLR SGI+WDLRKV Y+ Y F++ + G+ ++ + EMR+S+
Sbjct: 213 EAVNWGLSGPMLRASGIQWDLRKVDLYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESI 272
Query: 215 RIVEQAINKMPGG 227
+I++QA+ K+PGG
Sbjct: 273 KIIQQAVEKIPGG 285
Score = 177 (67.4 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 262 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 321
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 322 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 381
Score = 144 (55.7 bits), Expect = 1.1e-10, Sum P(2) = 1.1e-10
Identities = 31/64 (48%), Positives = 40/64 (62%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
+P +G LHRG EK+ E +T Q LPY R DY++ M E A E L NI++P RA Y
Sbjct: 41 EPILGYLHRGMEKIAENRTIIQYLPYVTRWDYLATMFTEAITVNAPEFLENIQIPQRASY 100
Query: 370 IRVM 373
IRV+
Sbjct: 101 IRVI 104
Score = 75 (31.5 bits), Expect = 8.6e-61, Sum P(3) = 8.6e-61
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
M++N GPQHP+ HGVL L +
Sbjct: 11 MIVNMGPQHPSMHGVLRLIVTL 32
>TIGR_CMR|CBU_1445 [details] [associations]
symbol:CBU_1445 "NADH dehydrogenase I, D subunit"
species:227377 "Coxiella burnetii RSA 493" [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=ISS] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0005886 GO:GO:0051287 GO:GO:0006810 GO:GO:0048038
EMBL:AE016828 GenomeReviews:AE016828_GR eggNOG:COG0649
HOGENOM:HOG000228264 OMA:QSNRIIK TIGRFAMs:TIGR01962 HSSP:Q56220
GO:GO:0050136 KO:K00333 ProtClustDB:PRK06075 RefSeq:NP_820428.1
ProteinModelPortal:Q83BQ8 GeneID:1209352 KEGG:cbu:CBU_1445
PATRIC:17931645 BioCyc:CBUR227377:GJ7S-1433-MONOMER Uniprot:Q83BQ8
Length = 417
Score = 320 (117.7 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
Identities = 68/136 (50%), Positives = 88/136 (64%)
Query: 118 LLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIK 177
LLD I+ F + F +DE E +LT+NR+W QRT +G+VSAE AL GF+G MLR SG++
Sbjct: 192 LLDFIWDFTARFPNLIDEYESLLTDNRIWKQRTVGIGVVSAERALQLGFTGPMLRASGVE 251
Query: 178 WDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAIN---KMPGGEV 229
WDLRK QPY Y+ +FDIPIG G+ ++ ++EMRQS RI+ Q + K PG V
Sbjct: 252 WDLRKKQPYAAYDRVDFDIPIGREGDCYDRYLVRIEEMRQSNRIIRQCVEWLRKNPGS-V 310
Query: 230 RTDDMKISTPSRSEMK 245
DD KI P R MK
Sbjct: 311 MIDDYKIVPPQREVMK 326
Score = 249 (92.7 bits), Expect = 3.6e-26, Sum P(2) = 3.6e-26
Identities = 48/71 (67%), Positives = 54/71 (76%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+++ IDPHIGLLHR TEKL E K Y Q + Y DRLDYVSMM NE Y LA+EKLL IE
Sbjct: 31 EVIQRIDPHIGLLHRATEKLAESKPYNQTIGYMDRLDYVSMMANEHGYVLAIEKLLGIEP 90
Query: 364 PLRAKYIRVMF 374
P+RAKYIR MF
Sbjct: 91 PIRAKYIRTMF 101
Score = 227 (85.0 bits), Expect = 3.0e-43, Sum P(3) = 3.0e-43
Identities = 52/118 (44%), Positives = 69/118 (58%)
Query: 207 MKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMK---------------GYPVPP 251
M++ + +R + + K PG V DD KI P R MK GY VP
Sbjct: 289 MRQSNRIIRQCVEWLRKNPGS-VMIDDYKIVPPQREVMKRDMEALIHHFKLFTEGYIVPE 347
Query: 252 GATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
G Y AVE PKGEFGVY+VSDG +KPYR K++A + HLAA+ ++ +G +AD+VAII
Sbjct: 348 GEAYAAVEQPKGEFGVYIVSDGANKPYRVKVRAASYPHLAAMNEMCRGHMIADLVAII 405
Score = 225 (84.3 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
Identities = 42/65 (64%), Positives = 50/65 (76%)
Query: 51 LFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGV 110
+F EITRILNH++ +G HALDVGAMT F + F ERE +M+ YE SGARMHA Y RPGGV
Sbjct: 100 MFDEITRILNHLLWLGAHALDVGAMTVFLYCFREREDLMDCYEAVSGARMHATYYRPGGV 159
Query: 111 ALDIP 115
D+P
Sbjct: 160 YRDLP 164
Score = 100 (40.3 bits), Expect = 4.6e-60, Sum P(3) = 4.6e-60
Identities = 17/26 (65%), Positives = 20/26 (76%)
Query: 30 QIRNMVINFGPQHPAAHGVLLLFAEI 55
++RN NFGPQHPAAHGVL L E+
Sbjct: 3 EVRNYTFNFGPQHPAAHGVLRLIVEV 28
>TIGR_CMR|CJE_1747 [details] [associations]
symbol:CJE_1747 "NADH-quinone oxidoreductase, D subunit"
species:195099 "Campylobacter jejuni RM1221" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0005886 GO:GO:0051287 GO:GO:0006810 GO:GO:0048038
EMBL:CP000025 GenomeReviews:CP000025_GR eggNOG:COG0649
HOGENOM:HOG000228264 TIGRFAMs:TIGR01962 HSSP:Q56220 GO:GO:0050136
KO:K00333 ProtClustDB:PRK06075 OMA:QAINWSL RefSeq:YP_179720.1
ProteinModelPortal:Q5HSL5 STRING:Q5HSL5 GeneID:3232374
KEGG:cjr:CJE1747 PATRIC:20045301
BioCyc:CJEJ195099:GJC0-1777-MONOMER Uniprot:Q5HSL5
Length = 408
Score = 393 (143.4 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 80/185 (43%), Positives = 122/185 (65%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
P+ A ++LL E+ RI +H++ + THALD+GAM+ F + F ERE +++ E+ GAR
Sbjct: 107 PRRAAVIRMILL--ELNRITSHLLWLATHALDIGAMSVFLYCFREREYVLDLIEKYCGAR 164
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAE 159
+ + +R GGV LD+P L+++ F F L + ED+L +NR+W RT++VG+V+ E
Sbjct: 165 LTHSSMRIGGVMLDLPENYLEEMLAFCDKFPNDLKDYEDLLDDNRIWRLRTENVGVVTKE 224
Query: 160 DALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQSL 214
ALN+G +GVMLRGSGIK+D+RK +PY Y EF +P T G+ + M+E R+SL
Sbjct: 225 QALNWGCTGVMLRGSGIKYDIRKEEPYLLYNEVEFGVPYATQGDSYARYKVYMQEFRESL 284
Query: 215 RIVEQ 219
+I+ Q
Sbjct: 285 KILRQ 289
Score = 160 (61.4 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 29/65 (44%), Positives = 42/65 (64%)
Query: 245 KGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLAD 304
+G P G Y E+PKGE G ++ SDGT +PYR K + P + H A E++ G++LAD
Sbjct: 332 QGLKPPKGEVYVPTESPKGELGFFIHSDGTGRPYRLKARTPSYWHCAFFEEMLVGTYLAD 391
Query: 305 IVAII 309
+VAI+
Sbjct: 392 VVAIM 396
Score = 148 (57.2 bits), Expect = 4.3e-12, Sum P(2) = 4.3e-12
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 311 PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKYI 370
P IG +HRG EK+ E Y + +P DR+DY++ N Y AVEKL +E+P RA I
Sbjct: 54 PCIGYMHRGMEKMAENMIYQEFIPTTDRMDYIAASANNYAYCAAVEKLCGLEIPRRAAVI 113
Query: 371 RVM 373
R++
Sbjct: 114 RMI 116
Score = 85 (35.0 bits), Expect = 2.5e-59, Sum P(3) = 2.5e-59
Identities = 17/40 (42%), Positives = 26/40 (65%)
Query: 16 KIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEI 55
K+ + +N+ E++ M+IN GPQHP+AHG L L E+
Sbjct: 6 KLKPYYENIA-FEQEDSKMIINLGPQHPSAHGNLRLILEL 44
>UNIPROTKB|P65569 [details] [associations]
symbol:nuoD "NADH-quinone oxidoreductase subunit D"
species:1773 "Mycobacterium tuberculosis" [GO:0005886 "plasma
membrane" evidence=IDA] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0005886 EMBL:AE000516 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0051287 GO:GO:0006810 GO:GO:0048038
EMBL:BX842582 eggNOG:COG0649 HOGENOM:HOG000228264
TIGRFAMs:TIGR01962 GO:GO:0050136 KO:K00333 ProtClustDB:PRK06075
OMA:LRMNHAF PIR:E70647 RefSeq:NP_217664.1 RefSeq:NP_337761.2
RefSeq:YP_006516611.1 ProteinModelPortal:P65569 SMR:P65569
PRIDE:P65569 EnsemblBacteria:EBMYCT00000002487
EnsemblBacteria:EBMYCT00000070187 GeneID:13317956 GeneID:888851
GeneID:923381 KEGG:mtc:MT3236 KEGG:mtu:Rv3148 KEGG:mtv:RVBD_3148
PATRIC:18128878 TubercuList:Rv3148 Uniprot:P65569
Length = 440
Score = 362 (132.5 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 72/198 (36%), Positives = 121/198 (61%)
Query: 48 VLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRP 107
+ +L E+ RI +H++A+ T +++GAMTP F F RE ++ +E+ +G RM++AY+RP
Sbjct: 131 IRVLMMELNRISSHLVALATGGMELGAMTPMFVGFRAREIVLTLFEKITGLRMNSAYIRP 190
Query: 108 GGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFS 167
GGVA D+P +I + L E+ ++L EN +W RT+ VG + + G +
Sbjct: 191 GGVAQDLPPNAATEIAEALKQLRQPLREMGELLNENAIWKARTQGVGYLDLTGCMALGIT 250
Query: 168 GVMLRGSGIKWDLRKVQPYDGYENFEFDI----PIGTHGN-VIGMKEMRQSLRIVEQAIN 222
G +LR +G+ DLRK +PY GY+++EFD+ +G +I +KEM +S++IVEQ ++
Sbjct: 251 GPILRSTGLPHDLRKSEPYCGYQHYEFDVITDDSCDAYGRYMIRVKEMWESMKIVEQCLD 310
Query: 223 KMPGGEVRTDDMKISTPS 240
K+ G D K++ P+
Sbjct: 311 KLRPGPTMISDRKLAWPA 328
Score = 161 (61.7 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 32/77 (41%), Positives = 50/77 (64%)
Query: 245 KGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLAD 304
+G VP G Y AVE+P+GE GV++VSDG ++PYR + P F +L ++ + +G +AD
Sbjct: 364 EGIRVPAGQVYVAVESPRGELGVHMVSDGGTRPYRVHYRDPSFTNLQSVAAMCEGGMVAD 423
Query: 305 IVAI---IDPHIGLLHR 318
++A IDP +G + R
Sbjct: 424 LIAAVASIDPVMGGVDR 440
Score = 146 (56.5 bits), Expect = 3.2e-11, Sum P(2) = 3.2e-11
Identities = 31/63 (49%), Positives = 40/63 (63%)
Query: 313 IGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNI--EVPLRAKYI 370
IG LH G EK +EY+ +TQ + + R+DY+S NE Y L VEKLL I E+P R I
Sbjct: 72 IGYLHTGIEKNLEYRYWTQGVTFVTRMDYLSPFFNETAYCLGVEKLLGITDEIPERVNVI 131
Query: 371 RVM 373
RV+
Sbjct: 132 RVL 134
Score = 80 (33.2 bits), Expect = 1.1e-55, Sum P(3) = 1.1e-55
Identities = 14/22 (63%), Positives = 17/22 (77%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
+V+N GPQHP+ HGVL L EI
Sbjct: 39 IVVNMGPQHPSTHGVLRLILEI 60
>TIGR_CMR|DET_0926 [details] [associations]
symbol:DET_0926 "proton-translocating NADH-quinone
oxidoreductase, D subunit" species:243164 "Dehalococcoides
ethenogenes 195" [GO:0016655 "oxidoreductase activity, acting on
NAD(P)H, quinone or similar compound as acceptor" evidence=ISS]
HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886
GO:GO:0051287 GO:GO:0006810 GO:GO:0048038 EMBL:CP000027
GenomeReviews:CP000027_GR eggNOG:COG0649 OMA:FGPFLAD HSSP:Q56220
GO:GO:0050136 KO:K00333 RefSeq:YP_181651.1
ProteinModelPortal:Q3Z7Z8 STRING:Q3Z7Z8 GeneID:3229771
KEGG:det:DET0926 PATRIC:21608899 HOGENOM:HOG000228263
ProtClustDB:CLSK2767660 BioCyc:DETH243164:GJNF-927-MONOMER
Uniprot:Q3Z7Z8
Length = 367
Score = 487 (176.5 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 101/270 (37%), Positives = 160/270 (59%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAM-TPFFWLFEEREKMMEFYERASGARMHAA 103
A + ++ E+ RI +H+ +G D+GA+ TP ++F EREK++E ++ SG R++
Sbjct: 95 AEYIRVILDELQRIASHLAGLGFFLNDLGALQTPLLYMFREREKIVELFDMCSGQRLNYN 154
Query: 104 YVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALN 163
Y R GG D+P L + + T +DE E +++ N + + RTK VG++ E A+N
Sbjct: 155 YYRFGGFVQDLPEEFLPALKKLLDTLPGFIDEYEQLISTNEIVLIRTKGVGVLKRELAIN 214
Query: 164 YGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVE 218
+G +LR SG+ WD+R+ PY Y+ FEFDIP +G+ ++ ++EMRQS+RI+
Sbjct: 215 SSAAGPVLRASGVNWDIRRNDPYSIYDRFEFDIPTAQNGDTYDRYMVRIREMRQSVRILR 274
Query: 219 QAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPY 278
QA+ +P GE+ K+ P P G Y+ +E PKGE G YLVSDGT KPY
Sbjct: 275 QAVKDLPEGEIMGKAPKLLKP----------PAGEVYSRIEGPKGELGFYLVSDGTDKPY 324
Query: 279 RCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
R +++ P +L+AL+ + G +AD++AI
Sbjct: 325 RWRVRPPCLLNLSALKDMVVGWKVADLMAI 354
Score = 190 (71.9 bits), Expect = 2.4e-15, Sum P(2) = 2.4e-15
Identities = 39/81 (48%), Positives = 51/81 (62%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+++ ++P G LHRG EKL E +TY Q +P+ DRLDY+ M N Y +AVEKL I V
Sbjct: 32 EVITDLEPVFGYLHRGIEKLAEGRTYLQDIPFTDRLDYLGSMTNNHAYVMAVEKLAGITV 91
Query: 364 PLRAKYIRVMFTFYQWAAQVL 384
P RA+YIRV+ Q A L
Sbjct: 92 PERAEYIRVILDELQRIASHL 112
Score = 66 (28.3 bits), Expect = 1.3e-51, Sum P(2) = 1.3e-51
Identities = 10/19 (52%), Positives = 14/19 (73%)
Query: 33 NMVINFGPQHPAAHGVLLL 51
+ ++N GPQHP+ HGV L
Sbjct: 7 SFILNIGPQHPSTHGVFRL 25
>UNIPROTKB|Q3AC80 [details] [associations]
symbol:nuoD "NADH-quinone oxidoreductase subunit D"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0016491 "oxidoreductase activity" evidence=ISS] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR014029 InterPro:IPR022885
Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886 GO:GO:0051287
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006810 GO:GO:0016491
GO:GO:0048038 eggNOG:COG0649 HOGENOM:HOG000228264 HSSP:Q56220
GO:GO:0050136 KO:K00333 OMA:QAINWSL ProtClustDB:PRK12322
RefSeq:YP_360254.1 ProteinModelPortal:Q3AC80 STRING:Q3AC80
GeneID:3726985 KEGG:chy:CHY_1422 PATRIC:21275975
BioCyc:CHYD246194:GJCN-1421-MONOMER Uniprot:Q3AC80
Length = 365
Score = 470 (170.5 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 100/269 (37%), Positives = 162/269 (60%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAY 104
A + ++ E++RI +H + + + +LD+G+ T + + F +RE ++E E +G+RM ++
Sbjct: 94 AEFIRVIATELSRIASHHVFLASMSLDMGSYTGWMYPFRDRELVLELLEMLTGSRMTFSF 153
Query: 105 VRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNY 164
+R GGVA D+P G ++ ++ +DE E +L N +++ RTK + VS E AL +
Sbjct: 154 MRIGGVADDLPEGFIEKAKEYLPKILDGVDEEEGLLAGNEIFLARTKGLAPVSVEKALAW 213
Query: 165 GFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQSLRIVEQ 219
G+ GV LR SG K+DLRK +PY Y+ FEFDIP G +G+ + + E+RQS++I+EQ
Sbjct: 214 GWGGVNLRASGYKFDLRKNRPYSVYDRFEFDIPTGANGDCWDRFYLRLAEIRQSVKIIEQ 273
Query: 220 AINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYR 279
A+ +P G + K+ P P G Y VEAPKG G Y+VSDG++KPYR
Sbjct: 274 ALEMIPEGPIMAKVPKVIKP----------PVGEVYHEVEAPKGILGYYVVSDGSTKPYR 323
Query: 280 CKIKAPGFAHLAALEKIGKGSFLADIVAI 308
++ P F ++ L+++ G+ LAD + I
Sbjct: 324 MHVRRPSFINIGMLKELLIGTKLADFITI 352
Score = 185 (70.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
+P +G LHRG EKL E +TYTQ +PY DR+DY+ M Y A+EKL+ IEVP RA++
Sbjct: 37 EPVVGYLHRGIEKLAEDRTYTQVIPYTDRMDYLGAMSYNLGYVQAIEKLMGIEVPERAEF 96
Query: 370 IRVMFT 375
IRV+ T
Sbjct: 97 IRVIAT 102
Score = 63 (27.2 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 36 INFGPQHPAAHGVLLLFAEI 55
IN GPQHP+ HGV + ++
Sbjct: 9 INVGPQHPSTHGVFRIILKL 28
>TIGR_CMR|CHY_1422 [details] [associations]
symbol:CHY_1422 "proton-translocating NADH-quinone
oxidoreductase, D subunit" species:246194 "Carboxydothermus
hydrogenoformans Z-2901" [GO:0016491 "oxidoreductase activity"
evidence=ISS] HAMAP:MF_01358 InterPro:IPR001135 InterPro:IPR014029
InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535 GO:GO:0005886
GO:GO:0051287 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006810
GO:GO:0016491 GO:GO:0048038 eggNOG:COG0649 HOGENOM:HOG000228264
HSSP:Q56220 GO:GO:0050136 KO:K00333 OMA:QAINWSL
ProtClustDB:PRK12322 RefSeq:YP_360254.1 ProteinModelPortal:Q3AC80
STRING:Q3AC80 GeneID:3726985 KEGG:chy:CHY_1422 PATRIC:21275975
BioCyc:CHYD246194:GJCN-1421-MONOMER Uniprot:Q3AC80
Length = 365
Score = 470 (170.5 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 100/269 (37%), Positives = 162/269 (60%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAY 104
A + ++ E++RI +H + + + +LD+G+ T + + F +RE ++E E +G+RM ++
Sbjct: 94 AEFIRVIATELSRIASHHVFLASMSLDMGSYTGWMYPFRDRELVLELLEMLTGSRMTFSF 153
Query: 105 VRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNY 164
+R GGVA D+P G ++ ++ +DE E +L N +++ RTK + VS E AL +
Sbjct: 154 MRIGGVADDLPEGFIEKAKEYLPKILDGVDEEEGLLAGNEIFLARTKGLAPVSVEKALAW 213
Query: 165 GFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQSLRIVEQ 219
G+ GV LR SG K+DLRK +PY Y+ FEFDIP G +G+ + + E+RQS++I+EQ
Sbjct: 214 GWGGVNLRASGYKFDLRKNRPYSVYDRFEFDIPTGANGDCWDRFYLRLAEIRQSVKIIEQ 273
Query: 220 AINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYR 279
A+ +P G + K+ P P G Y VEAPKG G Y+VSDG++KPYR
Sbjct: 274 ALEMIPEGPIMAKVPKVIKP----------PVGEVYHEVEAPKGILGYYVVSDGSTKPYR 323
Query: 280 CKIKAPGFAHLAALEKIGKGSFLADIVAI 308
++ P F ++ L+++ G+ LAD + I
Sbjct: 324 MHVRRPSFINIGMLKELLIGTKLADFITI 352
Score = 185 (70.2 bits), Expect = 2.0e-14, Sum P(2) = 2.0e-14
Identities = 36/66 (54%), Positives = 47/66 (71%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
+P +G LHRG EKL E +TYTQ +PY DR+DY+ M Y A+EKL+ IEVP RA++
Sbjct: 37 EPVVGYLHRGIEKLAEDRTYTQVIPYTDRMDYLGAMSYNLGYVQAIEKLMGIEVPERAEF 96
Query: 370 IRVMFT 375
IRV+ T
Sbjct: 97 IRVIAT 102
Score = 63 (27.2 bits), Expect = 1.6e-49, Sum P(2) = 1.6e-49
Identities = 10/20 (50%), Positives = 14/20 (70%)
Query: 36 INFGPQHPAAHGVLLLFAEI 55
IN GPQHP+ HGV + ++
Sbjct: 9 INVGPQHPSTHGVFRIILKL 28
>TIGR_CMR|GSU_0341 [details] [associations]
symbol:GSU_0341 "NADH dehydrogenase I, D subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=ISS] HAMAP:MF_01358 InterPro:IPR001135
InterPro:IPR014029 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0005886 GO:GO:0051287 GO:GO:0006810 GO:GO:0048038
EMBL:AE017180 GenomeReviews:AE017180_GR eggNOG:COG0649
HOGENOM:HOG000228264 TIGRFAMs:TIGR01962 HSSP:Q56220 TCDB:3.D.1.5.1
GO:GO:0050136 KO:K00333 RefSeq:NP_951401.1
ProteinModelPortal:Q74GA5 SMR:Q74GA5 GeneID:2686736
KEGG:gsu:GSU0341 PATRIC:22023424 OMA:LRMNHAF ProtClustDB:CLSK827764
BioCyc:GSUL243231:GH27-310-MONOMER Uniprot:Q74GA5
Length = 390
Score = 444 (161.4 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 81/205 (39%), Positives = 129/205 (62%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAY 104
A + ++ AE+TR+ +H++ + HALD+GAMT F + F ERE +M YE+ SGARM + Y
Sbjct: 94 AQTIRVIMAELTRLKSHLVWIACHALDIGAMTVFIYAFREREMIMSLYEKISGARMTSNY 153
Query: 105 VRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNY 164
R GG++ D+ G D+ I TF D E +LT+N +W+ RT G++SAEDA++Y
Sbjct: 154 FRVGGLSSDVYDGFEKDVREVIDTFPGHFDTYEGLLTKNTIWVNRTVGNGVISAEDAVDY 213
Query: 165 GFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQSLRIVEQ 219
G +G LRGSG+ WDLR+ PY GYE + F +P+G + + + EMR+++ I+ Q
Sbjct: 214 GITGPALRGSGVDWDLRRDNPYSGYEKYSFKVPVGEKCDTFDRYKVRLIEMREAVNIIRQ 273
Query: 220 AINKMPGGEVRTDDMKISTPSRSEM 244
A++ + G V D+ +++ P + +
Sbjct: 274 ALDSLKPGPVLADNPQVTYPPKENV 298
Score = 239 (89.2 bits), Expect = 1.9e-22, Sum P(2) = 1.9e-22
Identities = 48/116 (41%), Positives = 73/116 (62%)
Query: 209 EMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEM---------------KGYPVPPGA 253
EMR+++ I+ QA++ + G V D+ +++ P + + +G+PVP G
Sbjct: 263 EMREAVNIIRQALDSLKPGPVLADNPQVTYPPKENVYNSIEGLIHHFKIASEGFPVPEGE 322
Query: 254 TYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y +VEAPKGE G Y+VSDG KPYR +I+ P F +L A+EK+ KGS +AD+VA+I
Sbjct: 323 VYQSVEAPKGELGYYIVSDGGPKPYRMRIRPPSFVNLGAIEKMAKGSMIADLVAVI 378
Score = 202 (76.2 bits), Expect = 1.4e-17, Sum P(2) = 1.4e-17
Identities = 40/70 (57%), Positives = 51/70 (72%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+++ I PHIG LHRG EKL E++TY Q +P DRLDY++ M N Y LAVEKLL IE+
Sbjct: 31 EVIQKITPHIGYLHRGVEKLSEHRTYHQTIPLTDRLDYLAPMSNNLGYVLAVEKLLGIEI 90
Query: 364 PLRAKYIRVM 373
P RA+ IRV+
Sbjct: 91 PERAQTIRVI 100
Score = 75 (31.5 bits), Expect = 4.7e-48, Sum P(2) = 4.7e-48
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
M +N GPQHP+ HGVL + E+
Sbjct: 7 MTVNMGPQHPSTHGVLRMVIEL 28
>TIGR_CMR|BA_5539 [details] [associations]
symbol:BA_5539 "NADH dehydrogenase I, D subunit"
species:198094 "Bacillus anthracis str. Ames" [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=ISS] HAMAP:MF_01358
InterPro:IPR001135 InterPro:IPR022885 Pfam:PF00346 PROSITE:PS00535
GO:GO:0005886 GO:GO:0051287 EMBL:AE016879 EMBL:AE017334
EMBL:AE017225 GenomeReviews:AE016879_GR GenomeReviews:AE017225_GR
GenomeReviews:AE017334_GR GO:GO:0006810 GO:GO:0048038
eggNOG:COG0649 HOGENOM:HOG000228264 HSSP:Q56220 GO:GO:0050136
KO:K00333 RefSeq:NP_847697.1 RefSeq:YP_022207.1 RefSeq:YP_031386.1
ProteinModelPortal:Q81K03 DNASU:1085214
EnsemblBacteria:EBBACT00000011577 EnsemblBacteria:EBBACT00000014580
EnsemblBacteria:EBBACT00000020873 GeneID:1085214 GeneID:2819054
GeneID:2852792 KEGG:ban:BA_5539 KEGG:bar:GBAA_5539 KEGG:bat:BAS5147
OMA:QAINWSL ProtClustDB:PRK12322
BioCyc:BANT260799:GJAJ-5222-MONOMER
BioCyc:BANT261594:GJ7F-5400-MONOMER Uniprot:Q81K03
Length = 366
Score = 489 (177.2 bits), Expect = 1.1e-46, P = 1.1e-46
Identities = 111/307 (36%), Positives = 174/307 (56%)
Query: 16 KIINWNDNLVPVEKQIRNMVI------NFGPQHPA-AHGVLLLFAEITRILNHIMAVGTH 68
+II + D + + N VI G + P A + +L E+ RI +H++ GT+
Sbjct: 58 QIIPYTDRMDYLSAMTNNYVICHAVETMMGLEIPERAEYLRVLAMELGRIASHLVWWGTN 117
Query: 69 ALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGVALDIPIGLLDDIYHFIST 128
LD+GA++PF + F ERE ++ GAR+ Y+R GGV D P G ++ + F+
Sbjct: 118 LLDIGAVSPFLYAFREREMIINLLNELCGARLTFNYMRVGGVKWDAPDGWIEKVKEFVPY 177
Query: 129 FSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDG 188
+L D+++ N +++ R K VGI SAE+A++Y SG LR +G+ WDLRK +PY
Sbjct: 178 MREQLAGYHDLVSGNEIFLNRVKGVGIYSAEEAISYSLSGANLRCTGVNWDLRKDEPYSI 237
Query: 189 YENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMPG-GEVRTDDMKISTPSRS 242
Y+ F+FDIP+G+ G+ V M+E+ +SL+IVEQA+ + P G V KI
Sbjct: 238 YDRFDFDIPVGSVGDAWDRYVCRMQEIEESLKIVEQAVQQFPKEGAVLAKVPKI------ 291
Query: 243 EMKGYPVPPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFL 302
+K P G + +E+P+GE G Y+ SDG +PYR K + P F +L L K+ KG +
Sbjct: 292 -IKA---PKGEAFVRIESPRGEIGCYIASDGKKEPYRLKFRRPSFYNLQILPKLLKGENI 347
Query: 303 ADIVAII 309
A+++ I+
Sbjct: 348 ANLITIL 354
Score = 178 (67.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 34/70 (48%), Positives = 47/70 (67%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+I+ P IG LHRGTEK+ E YTQ +PY DR+DY+S M N AVE ++ +E+
Sbjct: 31 EIIKEATPVIGYLHRGTEKIAESLQYTQIIPYTDRMDYLSAMTNNYVICHAVETMMGLEI 90
Query: 364 PLRAKYIRVM 373
P RA+Y+RV+
Sbjct: 91 PERAEYLRVL 100
Score = 70 (29.7 bits), Expect = 2.7e-14, Sum P(2) = 2.7e-14
Identities = 12/22 (54%), Positives = 16/22 (72%)
Query: 34 MVINFGPQHPAAHGVLLLFAEI 55
M++N GPQHP+ HGV L +I
Sbjct: 7 MLLNVGPQHPSTHGVFRLVIKI 28
>TIGR_CMR|GSU_3444 [details] [associations]
symbol:GSU_3444 "NADH dehydrogenase I, B/C/D subunits"
species:243231 "Geobacter sulfurreducens PCA" [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=ISS] HAMAP:MF_01356 HAMAP:MF_01359
InterPro:IPR001135 InterPro:IPR001268 InterPro:IPR006137
InterPro:IPR006138 InterPro:IPR010218 InterPro:IPR014029
InterPro:IPR020396 InterPro:IPR022885 Pfam:PF00329 Pfam:PF00346
Pfam:PF01058 ProDom:PD001581 PROSITE:PS00535 PROSITE:PS00542
PROSITE:PS01150 GO:GO:0005886 GO:GO:0051287 GO:GO:0006810
GO:GO:0051539 GO:GO:0048038 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008137 Gene3D:3.40.50.700 eggNOG:COG0649 TIGRFAMs:TIGR01957
HOGENOM:HOG000228264 TIGRFAMs:TIGR01962 RefSeq:NP_954484.1
HSSP:Q56218 ProteinModelPortal:Q746S4 PRIDE:Q746S4 GeneID:2688148
KEGG:gsu:GSU3444 PATRIC:22029745 KO:K13380 OMA:VWDMFGI
ProtClustDB:PRK13292 BioCyc:GSUL243231:GH27-3413-MONOMER
Uniprot:Q746S4
Length = 792
Score = 413 (150.4 bits), Expect = 4.5e-42, Sum P(2) = 4.5e-42
Identities = 81/201 (40%), Positives = 125/201 (62%)
Query: 48 VLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRP 107
+ ++ AE+ RI NH++ +GT A DVGAMTP F+ F +REK+ + E +G RMH ++ R
Sbjct: 499 IRVMLAELFRIANHLVWLGTFAADVGAMTPVFYTFTDREKIFDIVEMVTGGRMHPSWFRI 558
Query: 108 GGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFS 167
GGVA D+P G + F+ RL E ED+L N ++ +R K VG+++ ++AL +G +
Sbjct: 559 GGVADDLPEGWDGAVKAFLDWMPGRLKEYEDLLKGNPIFRERLKGVGVITGDEALEWGIT 618
Query: 168 GVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQSLRIVEQAIN 222
G LR G++WDLRK PY+GY++F F++P G+ + ++E+RQSL IV Q
Sbjct: 619 GPNLRACGVEWDLRKKIPYNGYQHFHFEVPTEEGGDCWARYRVRIEEIRQSLHIVRQCWK 678
Query: 223 KMPGGEVRTDDMKISTPSRSE 243
+MP G TDD + P + +
Sbjct: 679 EMPAGRWITDDYRYVLPKKRD 699
Score = 207 (77.9 bits), Expect = 9.1e-16, Sum P(3) = 9.1e-16
Identities = 47/120 (39%), Positives = 67/120 (55%)
Query: 205 IGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEM---------------KGYPV 249
+ ++E+RQSL IV Q +MP G TDD + P + + +G
Sbjct: 661 VRIEEIRQSLHIVRQCWKEMPAGRWITDDYRYVLPKKRDALHDIESLIHHFINATRGMAP 720
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
P G Y+A+EAPKGE G ++VSDG + PYR +IK P F H+ AL + +G +AD +AII
Sbjct: 721 PKGENYSAIEAPKGENGYFVVSDGLNVPYRVRIKTPSFPHIQALPLMSRGWLVADFLAII 780
Score = 131 (51.2 bits), Expect = 2.9e-07, Sum P(2) = 2.9e-07
Identities = 29/65 (44%), Positives = 40/65 (61%)
Query: 309 IDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAK 368
+D IG HRG EK+ E + + Q +PY DR+DY++ + N Y +VE+L I VP R
Sbjct: 438 MDTDIGYHHRGAEKIGERQHWNQFIPYTDRIDYLAGVQNNLAYVNSVERLCGITVPDRGI 497
Query: 369 YIRVM 373
IRVM
Sbjct: 498 AIRVM 502
Score = 65 (27.9 bits), Expect = 4.5e-42, Sum P(2) = 4.5e-42
Identities = 8/16 (50%), Positives = 13/16 (81%)
Query: 34 MVINFGPQHPAAHGVL 49
+++N GPQHP HG++
Sbjct: 409 LILNLGPQHPGTHGII 424
Score = 43 (20.2 bits), Expect = 1.6e-13, Sum P(3) = 1.6e-13
Identities = 6/24 (25%), Positives = 13/24 (54%)
Query: 154 GIVSAEDALNYGFSGVMLRGSGIK 177
G+ + D G G+ +RG+ ++
Sbjct: 178 GVTKSRDTRGPGMEGIAIRGTSVQ 201
Score = 37 (18.1 bits), Expect = 9.1e-16, Sum P(3) = 9.1e-16
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 180 LRKVQPYDGYENFEFDIPIGTH 201
+R V DG E + D IG H
Sbjct: 424 IRFVLKLDGEEIVDMDTDIGYH 445
>UNIPROTKB|Q48H52 [details] [associations]
symbol:nuoC "NADH-quinone oxidoreductase subunit C/D"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0050136 "NADH dehydrogenase (quinone) activity" evidence=ISS]
[GO:0055114 "oxidation-reduction process" evidence=ISS]
HAMAP:MF_01359 InterPro:IPR001135 InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR014029 InterPro:IPR022885
InterPro:IPR023062 Pfam:PF00329 Pfam:PF00346 ProDom:PD001581
PROSITE:PS00535 PROSITE:PS00542 GO:GO:0005886 GO:GO:0051287
GO:GO:0006810 GO:GO:0048038 GO:GO:0008137 EMBL:CP000058
GenomeReviews:CP000058_GR eggNOG:COG0649 HOGENOM:HOG000228264
TIGRFAMs:TIGR01962 HSSP:Q56220 TIGRFAMs:TIGR01961 OMA:VWDMFGI
GO:GO:0050136 KO:K13378 ProtClustDB:PRK11742 RefSeq:YP_275281.1
ProteinModelPortal:Q48H52 STRING:Q48H52 GeneID:3558239
KEGG:psp:PSPPH_3111 PATRIC:19975595 GO:GO:0030964 Uniprot:Q48H52
Length = 593
Score = 376 (137.4 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 76/201 (37%), Positives = 120/201 (59%)
Query: 48 VLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRP 107
+ ++ AE RI +H++ +GT+ DVGAMTP F+ F +R+K E +G R+H A+ R
Sbjct: 300 IRIMMAEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQKAYTVIEAITGFRLHPAWYRI 359
Query: 108 GGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFS 167
GGVA D+P G + F+ RLDE +N + RT V + ++AL +G +
Sbjct: 360 GGVAHDLPRGWEKLVKDFVDWLPKRLDEYTKAALQNSILKGRTVGVAAYNTKEALEWGVT 419
Query: 168 GVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAIN 222
G LR +G +DLRK +PY GYENFEF++P+ +G+ ++ ++EMRQS++I++Q +
Sbjct: 420 GAGLRSTGCDFDLRKARPYSGYENFEFEVPLAANGDAYDRCMVRVEEMRQSIKIIDQCMR 479
Query: 223 KMPGGEVRTDDMKISTPSRSE 243
MP G + D ++TP E
Sbjct: 480 NMPEGPYKADH-PLTTPPPKE 499
Score = 156 (60.0 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 36/121 (29%), Positives = 63/121 (52%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRS--------------EMKGYPV 249
++ ++EMRQS++I++Q + MP G + D + P + ++ PV
Sbjct: 461 MVRVEEMRQSIKIIDQCMRNMPEGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 520
Query: 250 -PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
P ++ +EA KG YL SDG + YR +I+ P + HL + + KGS +AD++A
Sbjct: 521 MPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSYPHLQQIPSVIKGSMVADLIAY 580
Query: 309 I 309
+
Sbjct: 581 L 581
Score = 147 (56.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 308 IID--PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPL 365
I+D P IG HRG EK+ E +++ +PY DR+DY+ + N Y L+VEKL I+VP
Sbjct: 236 IVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDYLGGVMNNLPYVLSVEKLAGIKVPE 295
Query: 366 RAKYIRVMFT-FYQWAAQVL 384
+ IR+M F++ + +L
Sbjct: 296 KVDVIRIMMAEFFRITSHLL 315
Score = 67 (28.6 bits), Expect = 2.8e-39, Sum P(2) = 2.8e-39
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 34 MVINFGPQHPAAHGVLLLFAEIT--RILNHIMAVGTH 68
M +N GP HP+AHG + ++ I++ + +G H
Sbjct: 210 MFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYH 246
>UNIPROTKB|H9KYW0 [details] [associations]
symbol:Gga.4571 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003954 "NADH dehydrogenase activity"
evidence=IEA] [GO:0005747 "mitochondrial respiratory chain complex
I" evidence=IEA] [GO:0006979 "response to oxidative stress"
evidence=IEA] InterPro:IPR014029 PROSITE:PS00535 GO:GO:0016651
GeneTree:ENSGT00390000009529 EMBL:AADN02010497
Ensembl:ENSGALT00000001068 Uniprot:H9KYW0
Length = 120
Score = 291 (107.5 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 55/62 (88%), Positives = 58/62 (93%)
Query: 310 DPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKY 369
DPHIGLLHRGTEKLIEYKTY QALPYFDRLDYVSMMCNEQ Y+LAVEKLLNI PLRA++
Sbjct: 59 DPHIGLLHRGTEKLIEYKTYLQALPYFDRLDYVSMMCNEQAYALAVEKLLNIRPPLRAQW 118
Query: 370 IR 371
IR
Sbjct: 119 IR 120
Score = 143 (55.4 bits), Expect = 4.0e-39, Sum P(2) = 4.0e-39
Identities = 27/51 (52%), Positives = 32/51 (62%)
Query: 6 LYPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEIT 56
+YP KE KW WND K+I + INFGPQHPAAHGVL L E++
Sbjct: 1 MYPSKETEKWVPPPWNDKDPVAHKKISTLTINFGPQHPAAHGVLRLVMELS 51
>UNIPROTKB|Q4K9T4 [details] [associations]
symbol:nuoC "NADH-quinone oxidoreductase subunit C/D"
species:220664 "Pseudomonas protegens Pf-5" [GO:0050136 "NADH
dehydrogenase (quinone) activity" evidence=ISS] [GO:0055114
"oxidation-reduction process" evidence=ISS] HAMAP:MF_01359
InterPro:IPR001135 InterPro:IPR001268 InterPro:IPR010218
InterPro:IPR014029 InterPro:IPR022885 InterPro:IPR023062
Pfam:PF00329 Pfam:PF00346 ProDom:PD001581 PROSITE:PS00535
PROSITE:PS00542 GO:GO:0005886 GO:GO:0051287 GO:GO:0006810
GO:GO:0048038 EMBL:CP000076 GenomeReviews:CP000076_GR GO:GO:0008137
eggNOG:COG0649 HOGENOM:HOG000228264 TIGRFAMs:TIGR01962 HSSP:Q56220
TIGRFAMs:TIGR01961 OMA:VWDMFGI GO:GO:0050136 KO:K13378
ProtClustDB:PRK11742 GO:GO:0030964 RefSeq:YP_260999.1
ProteinModelPortal:Q4K9T4 STRING:Q4K9T4 GeneID:3478283
KEGG:pfl:PFL_3899 PATRIC:19877189
BioCyc:PFLU220664:GIX8-3932-MONOMER Uniprot:Q4K9T4
Length = 593
Score = 373 (136.4 bits), Expect = 6.3e-39, Sum P(2) = 6.3e-39
Identities = 75/201 (37%), Positives = 120/201 (59%)
Query: 48 VLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRP 107
+ ++ AE RI +H++ +GT+ DVGAMTP F+ F +R++ E +G R+H A+ R
Sbjct: 300 IRIMMAEFFRITSHLLFLGTYIQDVGAMTPVFFTFTDRQRAYTVIEAITGFRLHPAWYRI 359
Query: 108 GGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFS 167
GGVA D+P G + F+ RLDE +N + RT V + ++AL +G +
Sbjct: 360 GGVAHDLPRGWEKLVKDFVEWLPKRLDEYTKAALQNSILKGRTIGVAAYNTKEALEWGVT 419
Query: 168 GVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAIN 222
G LR +G +DLRK +PY GYENFEF++P+ +G+ ++ ++EMRQS++I++Q +
Sbjct: 420 GAGLRSTGCDFDLRKARPYSGYENFEFEVPLAANGDAYDRCMVRVEEMRQSIKIIDQCLR 479
Query: 223 KMPGGEVRTDDMKISTPSRSE 243
MP G + D ++TP E
Sbjct: 480 NMPEGPYKADH-PLTTPPPKE 499
Score = 162 (62.1 bits), Expect = 2.8e-11, Sum P(2) = 2.8e-11
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRS--------------EMKGYPV 249
++ ++EMRQS++I++Q + MP G + D + P + ++ PV
Sbjct: 461 MVRVEEMRQSIKIIDQCLRNMPEGPYKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 520
Query: 250 -PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
P ++ +EA KG YL SDG + YR +I+ P FAHL + + +GS +AD++A
Sbjct: 521 MPANESFQMIEATKGINSYYLTSDGGTMSYRTRIRTPSFAHLQQIPSVIRGSMVADLIAY 580
Query: 309 I 309
+
Sbjct: 581 L 581
Score = 147 (56.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/80 (40%), Positives = 49/80 (61%)
Query: 308 IID--PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPL 365
I+D P IG HRG EK+ E +++ +PY DR+DY+ + N Y L+VEKL I+VP
Sbjct: 236 IVDCVPDIGYHHRGAEKMAERQSWHSFIPYTDRIDYLGGVMNNLPYVLSVEKLAGIKVPE 295
Query: 366 RAKYIRVMFT-FYQWAAQVL 384
+ IR+M F++ + +L
Sbjct: 296 KVDVIRIMMAEFFRITSHLL 315
Score = 67 (28.6 bits), Expect = 6.3e-39, Sum P(2) = 6.3e-39
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 34 MVINFGPQHPAAHGVLLLFAEIT--RILNHIMAVGTH 68
M +N GP HP+AHG + ++ I++ + +G H
Sbjct: 210 MFLNLGPNHPSAHGAFRIILQLDGEEIVDCVPDIGYH 246
>UNIPROTKB|P33599 [details] [associations]
symbol:nuoC species:83333 "Escherichia coli K-12"
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0003954 "NADH dehydrogenase activity"
evidence=IDA] [GO:0030964 "NADH dehydrogenase complex"
evidence=IDA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0051287 "NAD binding" evidence=IEA] [GO:0008152
"metabolic process" evidence=IEA] [GO:0016020 "membrane"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0045272
"plasma membrane respiratory chain complex I" evidence=IDA;IMP]
[GO:0048038 "quinone binding" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA;IMP]
HAMAP:MF_01359 InterPro:IPR001135 InterPro:IPR001268
InterPro:IPR010218 InterPro:IPR014029 InterPro:IPR020396
InterPro:IPR022885 InterPro:IPR023062 Pfam:PF00329 Pfam:PF00346
ProDom:PD001581 PROSITE:PS00535 PROSITE:PS00542 GO:GO:0051287
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0006810 GO:GO:0048038 GO:GO:0008137
eggNOG:COG0649 HOGENOM:HOG000228264 TIGRFAMs:TIGR01962
TIGRFAMs:TIGR01961 OMA:VWDMFGI EMBL:X68301 TCDB:3.D.1.1.1
GO:GO:0045272 EMBL:L25055 PIR:D65000 RefSeq:NP_416789.2
RefSeq:YP_490526.1 ProteinModelPortal:P33599 SMR:P33599
DIP:DIP-10380N IntAct:P33599 MINT:MINT-1269278 PaxDb:P33599
PRIDE:P33599 EnsemblBacteria:EBESCT00000001963
EnsemblBacteria:EBESCT00000001964 EnsemblBacteria:EBESCT00000016928
GeneID:12933982 GeneID:946759 KEGG:ecj:Y75_p2250 KEGG:eco:b2286
PATRIC:32119939 EchoBASE:EB2009 EcoGene:EG12084 KO:K13378
ProtClustDB:PRK11742 BioCyc:EcoCyc:NUOC-MONOMER
BioCyc:ECOL316407:JW5375-MONOMER BioCyc:MetaCyc:NUOC-MONOMER
Genevestigator:P33599 Uniprot:P33599
Length = 596
Score = 366 (133.9 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 78/202 (38%), Positives = 122/202 (60%)
Query: 48 VLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRP 107
+ ++ +E+ RI +H++ + T DVGAMTP F+ F +R+K+ + E +G RMH A+ R
Sbjct: 302 IRVMLSELFRINSHLLYISTFIQDVGAMTPVFFAFTDRQKIYDLVEAITGFRMHPAWFRI 361
Query: 108 GGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFS 167
GGVA D+P G + F+ RL E +N + R++ V A++AL +G +
Sbjct: 362 GGVAHDLPRGWDRLLREFLDWMPKRLASYEKAALQNTILKGRSQGVAAYGAKEALEWGTT 421
Query: 168 GVMLRGSGIKWDLRKVQPYDGYENFEFDIPIG-----THGNV-IGMKEMRQSLRIVEQAI 221
G LR +GI +D+RK +PY GYENF+F+IP+G + V + ++E+RQSLRI+EQ +
Sbjct: 422 GAGLRATGIDFDVRKARPYSGYENFDFEIPVGGGVSDCYTRVMLKVEELRQSLRILEQCL 481
Query: 222 NKMPGGEVRTDDMKISTPSRSE 243
N MP G + D ++TP E
Sbjct: 482 NNMPEGPFKADH-PLTTPPPKE 502
Score = 160 (61.4 bits), Expect = 6.2e-11, Sum P(2) = 6.2e-11
Identities = 37/121 (30%), Positives = 64/121 (52%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRS--------------EMKGYPV 249
++ ++E+RQSLRI+EQ +N MP G + D + P + ++ PV
Sbjct: 464 MLKVEELRQSLRILEQCLNNMPEGPFKADHPLTTPPPKERTLQHIETLITHFLQVSWGPV 523
Query: 250 -PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI 308
P ++ +EA KG YL SDG++ YR +++ P FAHL + +GS ++D++
Sbjct: 524 MPANESFQMIEATKGINSYYLTSDGSTMSYRTRVRTPSFAHLQQIPAAIRGSLVSDLIVY 583
Query: 309 I 309
+
Sbjct: 584 L 584
Score = 147 (56.8 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 33/70 (47%), Positives = 43/70 (61%)
Query: 308 IID--PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPL 365
I+D P IG HRG EK+ E +++ +PY DR++Y+ NE Y LAVEKL I VP
Sbjct: 238 IVDCVPDIGYHHRGAEKMGERQSWHSYIPYTDRIEYLGGCVNEMPYVLAVEKLAGITVPD 297
Query: 366 RAKYIRVMFT 375
R IRVM +
Sbjct: 298 RVNVIRVMLS 307
Score = 66 (28.3 bits), Expect = 5.6e-38, Sum P(2) = 5.6e-38
Identities = 12/37 (32%), Positives = 21/37 (56%)
Query: 34 MVINFGPQHPAAHGVLLLFAEIT--RILNHIMAVGTH 68
M +N GP HP+AHG + ++ I++ + +G H
Sbjct: 212 MFLNLGPNHPSAHGAFRIVLQLDGEEIVDCVPDIGYH 248
>TIGR_CMR|SO_1019 [details] [associations]
symbol:SO_1019 "NADH dehydrogenase I, C/D subunits"
species:211586 "Shewanella oneidensis MR-1" [GO:0006120
"mitochondrial electron transport, NADH to ubiquinone"
evidence=ISS] [GO:0008137 "NADH dehydrogenase (ubiquinone)
activity" evidence=ISS] HAMAP:MF_01359 InterPro:IPR001135
InterPro:IPR001268 InterPro:IPR010218 InterPro:IPR014029
InterPro:IPR022885 InterPro:IPR023062 Pfam:PF00329 Pfam:PF00346
ProDom:PD001581 PROSITE:PS00535 PROSITE:PS00542 GO:GO:0005886
GO:GO:0051287 GO:GO:0006810 GO:GO:0048038 EMBL:AE014299
GenomeReviews:AE014299_GR GO:GO:0008137 eggNOG:COG0649
HOGENOM:HOG000228264 TIGRFAMs:TIGR01962 HSSP:Q56220
TIGRFAMs:TIGR01961 OMA:VWDMFGI KO:K13378 ProtClustDB:PRK11742
GO:GO:0030964 RefSeq:NP_716647.1 ProteinModelPortal:Q8EI31
GeneID:1168861 KEGG:son:SO_1019 PATRIC:23521683 Uniprot:Q8EI31
Length = 601
Score = 373 (136.4 bits), Expect = 6.3e-34, P = 6.3e-34
Identities = 88/245 (35%), Positives = 142/245 (57%)
Query: 7 YPDKEETKWKIINWNDNLVPVEKQIRNMVINFGPQHPAAHGVLLLFAEITRILNHIMAVG 66
Y D+ E ++N ++ VEK + + + PQ + ++ AE+ RI +H++ +G
Sbjct: 272 YTDRVEYLGGVMNNLPYVLAVEK-LAGIKV---PQR--VDMIRVMMAELFRIQSHLLFLG 325
Query: 67 THALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAYVRPGGVALDIPIG---LLDDIY 123
T+ DVGAMTP F+ F +R+ + E +GARMH A+ R GGVA D+P G L+ D
Sbjct: 326 TYIQDVGAMTPVFFTFTDRQHIYTIIEAITGARMHPAWFRIGGVAHDLPKGWQRLVQD-- 383
Query: 124 HFISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIKWDLRKV 183
+ +S RL + E N + RT V + E AL +G +G LR +G+ +D+RK
Sbjct: 384 NLLSWLPKRLMDYEKAAMRNSILRGRTIGVAAYTTEQALAWGTTGAGLRATGLNFDVRKW 443
Query: 184 QPYDGYENFEFDIPIGTHGNV-----IGMKEMRQSLRIVEQAINKMPGGEVRTDDMKIST 238
+PY GYE F+F++P+G++G+ + ++E+RQS+RI+EQ +N MP G + D ++T
Sbjct: 444 RPYSGYEQFDFEVPVGSNGDAYDRATVRIEEIRQSMRIIEQCMNNMPEGPFKADH-PLTT 502
Query: 239 PSRSE 243
P E
Sbjct: 503 PPPKE 507
Score = 171 (65.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 39/120 (32%), Positives = 65/120 (54%)
Query: 205 IGMKEMRQSLRIVEQAINKMPGGEVRTDDMKISTPSRS--------------EMKGYPVP 250
+ ++E+RQS+RI+EQ +N MP G + D + P + ++ PV
Sbjct: 470 VRIEEIRQSMRIIEQCMNNMPEGPFKADHPLTTPPPKERTLQHIETLINHFLQVSWGPVM 529
Query: 251 PGA-TYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
P A ++ +EA KG YL SDG++ YR +I+ P FAHL + + KGS ++D++ +
Sbjct: 530 PAAESFQMIEATKGINSYYLTSDGSTMSYRTRIRTPSFAHLQQIPSVIKGSMVSDLIVYL 589
Score = 141 (54.7 bits), Expect = 4.2e-09, Sum P(2) = 4.2e-09
Identities = 30/63 (47%), Positives = 40/63 (63%)
Query: 311 PHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEVPLRAKYI 370
P IG HRG EK+ E +++ +PY DR++Y+ + N Y LAVEKL I+VP R I
Sbjct: 248 PDIGYHHRGAEKMGERQSWHSYIPYTDRVEYLGGVMNNLPYVLAVEKLAGIKVPQRVDMI 307
Query: 371 RVM 373
RVM
Sbjct: 308 RVM 310
Score = 69 (29.3 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
Identities = 13/37 (35%), Positives = 20/37 (54%)
Query: 34 MVINFGPQHPAAHGVLLLFAEIT--RILNHIMAVGTH 68
M +N GP HP+AHG L ++ + N + +G H
Sbjct: 217 MFLNLGPNHPSAHGAFRLVLQLDGEEVRNCVPDIGYH 253
>UNIPROTKB|Q3Z856 [details] [associations]
symbol:DET0867 "Hydrogenase, group 4, EchE subunit,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008901 "ferredoxin hydrogenase activity" evidence=ISS]
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0009375
"ferredoxin hydrogenase complex" evidence=ISS] InterPro:IPR001135
InterPro:IPR001501 InterPro:IPR018194 Pfam:PF00346 Pfam:PF00374
PROSITE:PS00507 GO:GO:0051287 GO:GO:0009055 GO:GO:0048038
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016151 GO:GO:0016651
GO:GO:0008901 eggNOG:COG3261 GO:GO:0009375 HOGENOM:HOG000228263
RefSeq:YP_181593.1 STRING:Q3Z856 GeneID:3229821 KEGG:det:DET0867
PATRIC:21608793 KO:K14090 OMA:YCQGIEE ProtClustDB:CLSK900645
BioCyc:DETH243164:GJNF-868-MONOMER Uniprot:Q3Z856
Length = 359
Score = 264 (98.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 82/288 (28%), Positives = 139/288 (48%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ AH + +AE++R+ +H + +G A +G + F ++ RE +++ E +G R
Sbjct: 88 PQR--AHYLRTAWAELSRLHSHSLWLGLLADALGFESLFMQIWRAREIILDILEMTAGHR 145
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDE-VEDMLTENRLWIQRTKDVGIVSA 158
+ + GGV DI +L ++ F +D+ + L + +RT GI+S
Sbjct: 146 VITSACVVGGVRRDIDTEMLKKTSDMLAEFRKMMDKTILPTLLNDPTLKKRTVGKGILSY 205
Query: 159 EDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQS 213
+ A+ G G +RGSG+ D R Y ++ F+ + T G+ ++ +E+ QS
Sbjct: 206 DQAVTLGACGPTMRGSGVPSDARATG-YAAFKELGFEPVVETAGDSYARTLVRTREIYQS 264
Query: 214 LRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSDG 273
+ + A+ +MP GE+ +K P G +T VE P+GE Y+ ++G
Sbjct: 265 IDLTLAALQQMPAGEIM-------------VKAEAYPEGEIFTRVEQPRGELTYYIKANG 311
Query: 274 TSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI---IDPHIGLLHR 318
T+ RCKI+ P FA++ L + G LAD+ I IDP I R
Sbjct: 312 TNHLDRCKIRTPTFANIPTLLVMLPGCELADVPVITLSIDPCISCTER 359
Score = 115 (45.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+ V + P IG +HRG EK E T Q + +R+ + + + CY +E+L IEV
Sbjct: 28 ETVVGVTPVIGYVHRGVEKACEINTLRQNIFLVERICGICSIQHALCYCQGIEELAGIEV 87
Query: 364 PLRAKYIR 371
P RA Y+R
Sbjct: 88 PQRAHYLR 95
Score = 45 (20.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 35 VINFGPQHP 43
VI FGPQHP
Sbjct: 5 VIPFGPQHP 13
>TIGR_CMR|DET_0867 [details] [associations]
symbol:DET_0867 "hydrogenase, group 4, EchE subunit,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008901 "ferredoxin hydrogenase activity" evidence=ISS]
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0009375
"ferredoxin hydrogenase complex" evidence=ISS] InterPro:IPR001135
InterPro:IPR001501 InterPro:IPR018194 Pfam:PF00346 Pfam:PF00374
PROSITE:PS00507 GO:GO:0051287 GO:GO:0009055 GO:GO:0048038
EMBL:CP000027 GenomeReviews:CP000027_GR GO:GO:0016151 GO:GO:0016651
GO:GO:0008901 eggNOG:COG3261 GO:GO:0009375 HOGENOM:HOG000228263
RefSeq:YP_181593.1 STRING:Q3Z856 GeneID:3229821 KEGG:det:DET0867
PATRIC:21608793 KO:K14090 OMA:YCQGIEE ProtClustDB:CLSK900645
BioCyc:DETH243164:GJNF-868-MONOMER Uniprot:Q3Z856
Length = 359
Score = 264 (98.0 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 82/288 (28%), Positives = 139/288 (48%)
Query: 40 PQHPAAHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGAR 99
PQ AH + +AE++R+ +H + +G A +G + F ++ RE +++ E +G R
Sbjct: 88 PQR--AHYLRTAWAELSRLHSHSLWLGLLADALGFESLFMQIWRAREIILDILEMTAGHR 145
Query: 100 MHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDE-VEDMLTENRLWIQRTKDVGIVSA 158
+ + GGV DI +L ++ F +D+ + L + +RT GI+S
Sbjct: 146 VITSACVVGGVRRDIDTEMLKKTSDMLAEFRKMMDKTILPTLLNDPTLKKRTVGKGILSY 205
Query: 159 EDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGN-----VIGMKEMRQS 213
+ A+ G G +RGSG+ D R Y ++ F+ + T G+ ++ +E+ QS
Sbjct: 206 DQAVTLGACGPTMRGSGVPSDARATG-YAAFKELGFEPVVETAGDSYARTLVRTREIYQS 264
Query: 214 LRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSDG 273
+ + A+ +MP GE+ +K P G +T VE P+GE Y+ ++G
Sbjct: 265 IDLTLAALQQMPAGEIM-------------VKAEAYPEGEIFTRVEQPRGELTYYIKANG 311
Query: 274 TSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAI---IDPHIGLLHR 318
T+ RCKI+ P FA++ L + G LAD+ I IDP I R
Sbjct: 312 TNHLDRCKIRTPTFANIPTLLVMLPGCELADVPVITLSIDPCISCTER 359
Score = 115 (45.5 bits), Expect = 0.00020, Sum P(2) = 0.00020
Identities = 25/68 (36%), Positives = 37/68 (54%)
Query: 304 DIVAIIDPHIGLLHRGTEKLIEYKTYTQALPYFDRLDYVSMMCNEQCYSLAVEKLLNIEV 363
+ V + P IG +HRG EK E T Q + +R+ + + + CY +E+L IEV
Sbjct: 28 ETVVGVTPVIGYVHRGVEKACEINTLRQNIFLVERICGICSIQHALCYCQGIEELAGIEV 87
Query: 364 PLRAKYIR 371
P RA Y+R
Sbjct: 88 PQRAHYLR 95
Score = 45 (20.9 bits), Expect = 5.1e-26, Sum P(2) = 5.1e-26
Identities = 8/9 (88%), Positives = 8/9 (88%)
Query: 35 VINFGPQHP 43
VI FGPQHP
Sbjct: 5 VIPFGPQHP 13
>UNIPROTKB|Q3AB37 [details] [associations]
symbol:cooH "Carbon monoxide-induced hydrogenase, large
subunit" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008901 "ferredoxin hydrogenase activity" evidence=ISS]
[GO:0009375 "ferredoxin hydrogenase complex" evidence=ISS]
InterPro:IPR001135 InterPro:IPR001501 Pfam:PF00346 Pfam:PF00374
GO:GO:0051287 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0048038
GO:GO:0016151 GO:GO:0016651 GO:GO:0008901 eggNOG:COG3261
GO:GO:0009375 HOGENOM:HOG000228263 RefSeq:YP_360647.1
ProteinModelPortal:Q3AB37 STRING:Q3AB37 GeneID:3726690
KEGG:chy:CHY_1827 PATRIC:21276757 OMA:EEPMYFR
ProtClustDB:CLSK705685 BioCyc:CHYD246194:GJCN-1826-MONOMER
Uniprot:Q3AB37
Length = 360
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 83/289 (28%), Positives = 137/289 (47%)
Query: 39 GPQHPAAHGVLLLFA-EITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASG 97
G Q P L + A EI RI +H+ + A +G + F + E RE + + E G
Sbjct: 84 GIQIPERAEYLRVIADEIKRIASHLFNIAMMAHIIGFDSLFMHVMELREIVQDIKETIYG 143
Query: 98 ARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVS 157
RM A GGV D+ + + + L+E+ + N+ RT+ VGI+
Sbjct: 144 NRMDLAANCIGGVRYDLSEEKIKYLARQLDNLKKPLEEITRIYMNNKFVRARTEGVGILP 203
Query: 158 AEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQ 212
++AL YG G + RGSGI D+R PY Y+ + ++ + T +V + ++E+++
Sbjct: 204 KDEALRYGVVGPVARGSGINNDVRVKSPYAAYDKLKVNVQLETGCDVKARALVRLREIQE 263
Query: 213 SLRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSD 272
++ IV+ + ++P G D + P +P G EAP+GE YL ++
Sbjct: 264 AINIVQHCLKELPDGPTCIDYL----PE--------IPAGEAVARSEAPRGELIYYLRTN 311
Query: 273 GTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII---DPHIGLLHR 318
G+ P R K + P + + AL+ + G+ +ADI II DP I R
Sbjct: 312 GSDIPERIKWRVPTYMNWEALKVMMPGNKVADIPLIINSIDPCISCTER 360
>TIGR_CMR|CHY_1827 [details] [associations]
symbol:CHY_1827 "carbon monoxide-induced hydrogenase,
large subunit" species:246194 "Carboxydothermus hydrogenoformans
Z-2901" [GO:0008901 "ferredoxin hydrogenase activity" evidence=ISS]
[GO:0009375 "ferredoxin hydrogenase complex" evidence=ISS]
InterPro:IPR001135 InterPro:IPR001501 Pfam:PF00346 Pfam:PF00374
GO:GO:0051287 EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0048038
GO:GO:0016151 GO:GO:0016651 GO:GO:0008901 eggNOG:COG3261
GO:GO:0009375 HOGENOM:HOG000228263 RefSeq:YP_360647.1
ProteinModelPortal:Q3AB37 STRING:Q3AB37 GeneID:3726690
KEGG:chy:CHY_1827 PATRIC:21276757 OMA:EEPMYFR
ProtClustDB:CLSK705685 BioCyc:CHYD246194:GJCN-1826-MONOMER
Uniprot:Q3AB37
Length = 360
Score = 269 (99.8 bits), Expect = 2.3e-23, P = 2.3e-23
Identities = 83/289 (28%), Positives = 137/289 (47%)
Query: 39 GPQHPAAHGVLLLFA-EITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASG 97
G Q P L + A EI RI +H+ + A +G + F + E RE + + E G
Sbjct: 84 GIQIPERAEYLRVIADEIKRIASHLFNIAMMAHIIGFDSLFMHVMELREIVQDIKETIYG 143
Query: 98 ARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVS 157
RM A GGV D+ + + + L+E+ + N+ RT+ VGI+
Sbjct: 144 NRMDLAANCIGGVRYDLSEEKIKYLARQLDNLKKPLEEITRIYMNNKFVRARTEGVGILP 203
Query: 158 AEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----IGMKEMRQ 212
++AL YG G + RGSGI D+R PY Y+ + ++ + T +V + ++E+++
Sbjct: 204 KDEALRYGVVGPVARGSGINNDVRVKSPYAAYDKLKVNVQLETGCDVKARALVRLREIQE 263
Query: 213 SLRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYLVSD 272
++ IV+ + ++P G D + P +P G EAP+GE YL ++
Sbjct: 264 AINIVQHCLKELPDGPTCIDYL----PE--------IPAGEAVARSEAPRGELIYYLRTN 311
Query: 273 GTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII---DPHIGLLHR 318
G+ P R K + P + + AL+ + G+ +ADI II DP I R
Sbjct: 312 GSDIPERIKWRVPTYMNWEALKVMMPGNKVADIPLIINSIDPCISCTER 360
>UNIPROTKB|C5MRJ2 [details] [associations]
symbol:ndhH "NdhH" species:4530 "Oryza sativa" [GO:0009536
"plastid" evidence=IC] InterPro:IPR001135 Pfam:PF00346
GO:GO:0009536 GO:GO:0051287 GO:GO:0048038 GO:GO:0009535
GO:GO:0016651 EMBL:GQ150219 EMBL:GQ150220 EMBL:GQ150222
EMBL:GQ150223 EMBL:GQ150224 EMBL:GQ150226 EMBL:GQ150227
EMBL:GQ150228 EMBL:GQ150229 EMBL:GQ150230 EMBL:GQ150231
EMBL:GQ150232 EMBL:GQ150233 EMBL:GQ150234 EMBL:GQ150235
EMBL:GQ150236 EMBL:GQ150237 EMBL:GQ150238 Gramene:C5MRJ2
Genevestigator:C5MRJ2 Uniprot:C5MRJ2
Length = 216
Score = 229 (85.7 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 42/108 (38%), Positives = 72/108 (66%)
Query: 125 FISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIKWDLRKVQ 184
F F + E + ++T+N ++++R + VG +S E+A+N+G SG MLR SGI+WDLRKV
Sbjct: 1 FCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKVD 60
Query: 185 PYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMPGG 227
Y+ Y F++ + G+ ++ + EMR+S++I++QA+ K+PGG
Sbjct: 61 LYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESIKIIQQAVEKIPGG 108
Score = 177 (67.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 85 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 144
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 145 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 204
>UNIPROTKB|C5MRJ4 [details] [associations]
symbol:ndhH "NdhH" species:39946 "Oryza sativa Indica
Group" [GO:0009536 "plastid" evidence=IC] InterPro:IPR001135
Pfam:PF00346 GO:GO:0009536 GO:GO:0051287 GO:GO:0048038
GO:GO:0009535 GO:GO:0016651 EMBL:GQ150221 Gramene:C5MRJ4
Uniprot:C5MRJ4
Length = 216
Score = 229 (85.7 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 42/108 (38%), Positives = 72/108 (66%)
Query: 125 FISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIKWDLRKVQ 184
F F + E + ++T+N ++++R + VG +S E+A+N+G SG MLR SGI+WDLRKV
Sbjct: 1 FCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKVD 60
Query: 185 PYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMPGG 227
Y+ Y F++ + G+ ++ + EMR+S++I++QA+ K+PGG
Sbjct: 61 LYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESIKIIQQAVEKIPGG 108
Score = 177 (67.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 85 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 144
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 145 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 204
>UNIPROTKB|C5MRJ8 [details] [associations]
symbol:ndhH "NdhH" species:39947 "Oryza sativa Japonica
Group" [GO:0009536 "plastid" evidence=IC] InterPro:IPR001135
Pfam:PF00346 GO:GO:0009536 GO:GO:0051287 GO:GO:0048038
GO:GO:0009535 GO:GO:0016651 eggNOG:COG0649 EMBL:GQ150225
EMBL:GQ848577 EMBL:GQ848578 STRING:C5MRJ8 Gramene:C5MRJ8
Uniprot:C5MRJ8
Length = 216
Score = 229 (85.7 bits), Expect = 8.9e-19, P = 8.9e-19
Identities = 42/108 (38%), Positives = 72/108 (66%)
Query: 125 FISTFSARLDEVEDMLTENRLWIQRTKDVGIVSAEDALNYGFSGVMLRGSGIKWDLRKVQ 184
F F + E + ++T+N ++++R + VG +S E+A+N+G SG MLR SGI+WDLRKV
Sbjct: 1 FCDYFLRGVIEYQQLITQNPIFLERVEGVGFISGEEAVNWGLSGPMLRASGIQWDLRKVD 60
Query: 185 PYDGYENFEFDIPIGTHGN-----VIGMKEMRQSLRIVEQAINKMPGG 227
Y+ Y F++ + G+ ++ + EMR+S++I++QA+ K+PGG
Sbjct: 61 LYESYNQFDWKVQWQKEGDSLARYLVRIGEMRESIKIIQQAVEKIPGG 108
Score = 177 (67.4 bits), Expect = 5.6e-13, P = 5.6e-13
Identities = 43/120 (35%), Positives = 67/120 (55%)
Query: 204 VIGMKEMRQSLRIVEQAINKMPGG-----EVRT---------DDMKISTPSRSEMKGYPV 249
++ + EMR+S++I++QA+ K+PGG EVR +D + + + +
Sbjct: 85 LVRIGEMRESIKIIQQAVEKIPGGPYENLEVRRFKKAKNSEWNDFEYRFLGKKPSPNFEL 144
Query: 250 PPGATYTAVEAPKGEFGVYLVSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLADIVAII 309
Y VEAPKGE G+YLV D + P+R KI+ PGF +L L ++ K LADI+ I+
Sbjct: 145 SKQELYARVEAPKGELGIYLVGDDSLFPWRWKIRPPGFINLQILPQLVKKMKLADIMTIL 204
>TIGR_CMR|DET_1571 [details] [associations]
symbol:DET_1571 "hydrogenase, group 4, HycE subunit,
putative" species:243164 "Dehalococcoides ethenogenes 195"
[GO:0008901 "ferredoxin hydrogenase activity" evidence=ISS]
[GO:0009375 "ferredoxin hydrogenase complex" evidence=ISS]
InterPro:IPR001135 InterPro:IPR001268 Pfam:PF00329 Pfam:PF00346
ProDom:PD001581 GO:GO:0051287 GO:GO:0048038 GO:GO:0008137
EMBL:CP000027 GenomeReviews:CP000027_GR eggNOG:COG3261
HOGENOM:HOG000228265 OMA:CNKSFNC RefSeq:YP_182268.1
ProteinModelPortal:Q3Z681 STRING:Q3Z681 GeneID:3229145
KEGG:det:DET1571 PATRIC:21610156 ProtClustDB:CLSK900539
BioCyc:DETH243164:GJNF-1572-MONOMER Uniprot:Q3Z681
Length = 526
Score = 229 (85.7 bits), Expect = 1.9e-16, P = 1.9e-16
Identities = 75/284 (26%), Positives = 133/284 (46%)
Query: 45 AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASGARMHAAY 104
A + L+ E+ R+ +H+ + DV L RE++M + +R SG+R
Sbjct: 260 AEQLRLILLEMERLYSHLSDLSGMLTDVAYPVGAAALMALREELMRWNKRLSGSRFLKGI 319
Query: 105 VRPGGVALDIPIGLLDDIYHFISTFSARLDE-VEDMLTENRLWIQRTKDVGIVSAEDALN 163
+ PGG+ DIP G+++++ ++ F R ++ VE L + + + R + GI++ +
Sbjct: 320 ITPGGLLRDIPAGIVNELADYLRVFEGRFNQQVEKALAKTSV-VDRFETTGIINNRLLVP 378
Query: 164 YGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNVIGMKEMRQSLRIVEQAINK 223
+GV R SG D R QPY Y F+ P+ G+V+ ++R S
Sbjct: 379 LNITGVAARASGADIDTRLNQPYGLYSELAFEPPVLPEGDVMARFKVRVS---------- 428
Query: 224 MPGGEVRTD-DMKISTPSRSEMKGYPVP--P--GATYTAVEAPKGEFGVYL-VSDGTSKP 277
EV+T + + T SR Y VP P G + VE+P+G+ +L + DG +
Sbjct: 429 ----EVQTSLGLILQTASRLSAGEYIVPLKPQNGYSLVLVESPRGQSLHWLWLRDGKIER 484
Query: 278 YRCKIKAPGFAHLAALEKIGKGSFLADIVAIIDPHIGLLHRGTE 321
Y K++ + + A+E G + D +I+ + L + GT+
Sbjct: 485 Y--KVRTASYCNWQAIEHAVLGDIIPDF-PLINKSLNLSYAGTD 525
>UNIPROTKB|Q74F66 [details] [associations]
symbol:ehrL "Ech-hydrogenase-related complex, large
subunit" species:243231 "Geobacter sulfurreducens PCA" [GO:0008137
"NADH dehydrogenase (ubiquinone) activity" evidence=ISS]
InterPro:IPR001135 InterPro:IPR001268 Pfam:PF00329 Pfam:PF00346
GO:GO:0051287 GO:GO:0048038 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008137 HOGENOM:HOG000228265 RefSeq:NP_951800.1
ProteinModelPortal:Q74F66 GeneID:2687239 KEGG:gsu:GSU0743
PATRIC:22024247 OMA:HGDVCAR ProtClustDB:CLSK924435
BioCyc:GSUL243231:GH27-732-MONOMER Uniprot:Q74F66
Length = 505
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 60/241 (24%), Positives = 100/241 (41%)
Query: 39 GPQHPA-AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASG 97
G + PA A + + E+ R+ NH +G A DVG + + R + G
Sbjct: 229 GTRVPARAEALRGIALELERLANHTGDLGAIAGDVGYLPTASFCGRIRGDFLNMSAVLCG 288
Query: 98 ARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVS 157
+R VRPGGV D+ DD+ + + L ++L + + R ++ G V
Sbjct: 289 SRFGRGLVRPGGVLFDLGPAERDDLLARLDAAQSDLQGAVEILWDAPSVMSRLENTGTVP 348
Query: 158 AEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNVIGMKEMR-----Q 212
A+ A G G R G+ D+R+ PY Y + + HG+V +R +
Sbjct: 349 ADTARELGLVGPAARACGLNRDVRRDHPYGIYRMAQIPVVTAHHGDVCARSTVRWLEAGK 408
Query: 213 SLRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGAT-YTAVEAPKGEFGVYLVS 271
SL + + + ++PGG R + + P R + G + A+ G F Y V+
Sbjct: 409 SLDFIREQLKQLPGGGCRNEAGSLQ-PDRIAVALTEGWRGEVCHVAITGADGRFLRYKVT 467
Query: 272 D 272
D
Sbjct: 468 D 468
>TIGR_CMR|GSU_0743 [details] [associations]
symbol:GSU_0743 "NAD-dependent dehydrogenase subunit"
species:243231 "Geobacter sulfurreducens PCA" [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=ISS]
InterPro:IPR001135 InterPro:IPR001268 Pfam:PF00329 Pfam:PF00346
GO:GO:0051287 GO:GO:0048038 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0008137 HOGENOM:HOG000228265 RefSeq:NP_951800.1
ProteinModelPortal:Q74F66 GeneID:2687239 KEGG:gsu:GSU0743
PATRIC:22024247 OMA:HGDVCAR ProtClustDB:CLSK924435
BioCyc:GSUL243231:GH27-732-MONOMER Uniprot:Q74F66
Length = 505
Score = 175 (66.7 bits), Expect = 2.5e-10, P = 2.5e-10
Identities = 60/241 (24%), Positives = 100/241 (41%)
Query: 39 GPQHPA-AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASG 97
G + PA A + + E+ R+ NH +G A DVG + + R + G
Sbjct: 229 GTRVPARAEALRGIALELERLANHTGDLGAIAGDVGYLPTASFCGRIRGDFLNMSAVLCG 288
Query: 98 ARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRTKDVGIVS 157
+R VRPGGV D+ DD+ + + L ++L + + R ++ G V
Sbjct: 289 SRFGRGLVRPGGVLFDLGPAERDDLLARLDAAQSDLQGAVEILWDAPSVMSRLENTGTVP 348
Query: 158 AEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNVIGMKEMR-----Q 212
A+ A G G R G+ D+R+ PY Y + + HG+V +R +
Sbjct: 349 ADTARELGLVGPAARACGLNRDVRRDHPYGIYRMAQIPVVTAHHGDVCARSTVRWLEAGK 408
Query: 213 SLRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGAT-YTAVEAPKGEFGVYLVS 271
SL + + + ++PGG R + + P R + G + A+ G F Y V+
Sbjct: 409 SLDFIREQLKQLPGGGCRNEAGSLQ-PDRIAVALTEGWRGEVCHVAITGADGRFLRYKVT 467
Query: 272 D 272
D
Sbjct: 468 D 468
>UNIPROTKB|P16431 [details] [associations]
symbol:hycE "hydrogenase 3, large subunit" species:83333
"Escherichia coli K-12" [GO:0051287 "NAD binding" evidence=IEA]
[GO:0048038 "quinone binding" evidence=IEA] [GO:0016651
"oxidoreductase activity, acting on NAD(P)H" evidence=IEA]
[GO:0008137 "NADH dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0009375 "ferredoxin hydrogenase complex" evidence=RCA]
[GO:0055114 "oxidation-reduction process" evidence=IEA] [GO:0051539
"4 iron, 4 sulfur cluster binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016151 "nickel cation
binding" evidence=IEA;RCA;IDA] InterPro:IPR001135
InterPro:IPR001268 InterPro:IPR001501 InterPro:IPR014029
Pfam:PF00329 Pfam:PF00346 Pfam:PF00374 ProDom:PD001581
PROSITE:PS00535 GO:GO:0051287 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0051539
GO:GO:0048038 GO:GO:0008137 GO:GO:0016151 EMBL:U29579 EMBL:X17506
PIR:S08623 RefSeq:NP_417201.1 RefSeq:YP_490930.1
ProteinModelPortal:P16431 SMR:P16431 DIP:DIP-9975N IntAct:P16431
MINT:MINT-1223046 PRIDE:P16431 EnsemblBacteria:EBESCT00000001842
EnsemblBacteria:EBESCT00000016299 GeneID:12932453 GeneID:947396
KEGG:ecj:Y75_p2659 KEGG:eco:b2721 PATRIC:32120842 EchoBASE:EB0473
EcoGene:EG10478 eggNOG:COG3261 HOGENOM:HOG000228262 KO:K15830
OMA:GICSHIH ProtClustDB:CLSK880407 BioCyc:EcoCyc:HYCELARGE-MONOMER
BioCyc:ECOL316407:JW2691-MONOMER BioCyc:MetaCyc:HYCELARGE-MONOMER
Genevestigator:P16431 Uniprot:P16431
Length = 569
Score = 173 (66.0 bits), Expect = 5.2e-10, P = 5.2e-10
Identities = 73/309 (23%), Positives = 132/309 (42%)
Query: 39 GPQHPA-AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMMEFYERASG 97
G Q P A + + E+ R+ +H++ +G G + F F RE M+ E +G
Sbjct: 261 GIQVPERAQMIRAILLEVERLHSHLLNLGLACHFTGFDSGFMQFFRVRETSMKMAEILTG 320
Query: 98 ARMHAAYVRPGGVALDIPIGLLDDIYH---FISTFSARLDEVEDMLTENRLWIQRTKDVG 154
AR GG+ D+ L DD+ + E+ D+L QRT +G
Sbjct: 321 ARKTYGLNLIGGIRRDL---LKDDMIQTRQLAQQMRREVQELVDVLLSTPNMEQRTVGIG 377
Query: 155 IVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNVIG-----MKE 209
+ E A ++ G M+R SG D R P+ GY ++ +VI + E
Sbjct: 378 RLDPEIARDFSNVGPMVRASGHARDTRADHPFVGYGLLPMEVHSEQGCDVISRLKVRINE 437
Query: 210 MRQSLRIVEQAINKMPGGEVRTDDMKISTPSRSEMKGYPVPPGATYTAVEAPKGEFGVYL 269
+ +L +++ ++ +PGG + + P R + G+ EAP+G+ +
Sbjct: 438 VYTALNMIDYGLDNLPGGPLMVEGFTY-IPHRFAL-GF----------AEAPRGDDIHWS 485
Query: 270 VSDGTSKPYRCKIKAPGFAHLAALEKIGKGSFLAD---IVAIIDPHIGLLHRGTEKLIEY 326
++ K YR + +A +A+ L + +G+ ++D I+ +DP R T +
Sbjct: 486 MTGDNQKLYRWRCRAATYANWPTLRYMLRGNTVSDAPLIIGSLDPCYSCTDRMTVVDVRK 545
Query: 327 KTYTQALPY 335
K ++ +PY
Sbjct: 546 KK-SKVVPY 553
>UNIPROTKB|P77329 [details] [associations]
symbol:hyfG "hydrogenase 4, large subunit" species:83333
"Escherichia coli K-12" [GO:0051287 "NAD binding" evidence=IEA]
[GO:0048038 "quinone binding" evidence=IEA] [GO:0016651
"oxidoreductase activity, acting on NAD(P)H" evidence=IEA]
[GO:0016151 "nickel cation binding" evidence=IEA] [GO:0008137 "NADH
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051539 "4 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0016491 "oxidoreductase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001135
InterPro:IPR001268 InterPro:IPR001501 InterPro:IPR014029
Pfam:PF00329 Pfam:PF00346 Pfam:PF00374 ProDom:PD001581
PROSITE:PS00535 GO:GO:0051287 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0051539
GO:GO:0048038 GO:GO:0008137 GO:GO:0016151 EMBL:M63654
eggNOG:COG3261 HOGENOM:HOG000228262 ProtClustDB:CLSK880407
PIR:F65024 RefSeq:NP_416982.1 RefSeq:YP_490715.1
ProteinModelPortal:P77329 SMR:P77329 DIP:DIP-9989N IntAct:P77329
MINT:MINT-1310624 EnsemblBacteria:EBESCT00000001714
EnsemblBacteria:EBESCT00000018243 GeneID:12931771 GeneID:946964
KEGG:ecj:Y75_p2440 KEGG:eco:b2487 PATRIC:32120361 EchoBASE:EB3967
EcoGene:EG14215 KO:K12142 OMA:DVVHYLY BioCyc:EcoCyc:MONOMER0-150
BioCyc:ECOL316407:JW2472-MONOMER Genevestigator:P77329
Uniprot:P77329
Length = 555
Score = 122 (48.0 bits), Expect = 0.00022, P = 0.00022
Identities = 57/207 (27%), Positives = 85/207 (41%)
Query: 33 NMVIN-FGPQHPA-AHGVLLLFAEITRILNHIMAVGTHALDVGAMTPFFWLFEEREKMME 90
N V N G + P AH + + E+ R+ +H++ +G VG T F F REK M
Sbjct: 256 NSVENALGIEVPQRAHTIRSILLEVERLHSHLLNLGLSCHFVGFDTGFMQFFRVREKSMT 315
Query: 91 FYERASGARMHAAYVRPGGVALDIPIGLLDDIYHFISTFSARLDEVEDMLTENRLWIQRT 150
E G+R GGV DI + A + E+ +ML QRT
Sbjct: 316 MAELLIGSRKTYGLNLIGGVRRDILKEQRLQTLKLVREMRADVSELVEMLLATPNMEQRT 375
Query: 151 KDVGIVSAEDALNYGFSGVMLRGSGIKWDLRKVQPYDGYENFEFDIPIGTHGNV-----I 205
+ +GI+ + I DLR PY Y N + T G+V +
Sbjct: 376 QGIGILDRQ----------------IARDLRFDHPYADYGNIPKTLFTFTGGDVFSRVMV 419
Query: 206 GMKEMRQSLRIVEQAINKMPGGEVRTD 232
+KE SL ++E A++ MP + T+
Sbjct: 420 RVKETFDSLAMLEFALDNMPDTPLLTE 446
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.322 0.139 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 385 385 0.00092 117 3 11 22 0.37 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 60
No. of states in DFA: 613 (65 KB)
Total size of DFA: 264 KB (2140 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 31.39u 0.09s 31.48t Elapsed: 00:00:04
Total cpu time: 31.40u 0.10s 31.50t Elapsed: 00:00:04
Start: Thu Aug 15 15:03:36 2013 End: Thu Aug 15 15:03:40 2013