BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7155
(169 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|110758942|ref|XP_395142.3| PREDICTED: transcription factor RFX3-like [Apis mellifera]
Length = 825
Score = 160 bits (406), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 88/157 (56%), Positives = 110/157 (70%), Gaps = 16/157 (10%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPH-ENTEV-------AYIVDEPA 57
QL+ NGTYLIQQ+V +PT HA I A TA R SP ENTE AY++ +
Sbjct: 247 GQLLSQGNGTYLIQQSVVDGDPTAHALISAATA-RASPQTENTETVVSGGGGAYLISGNS 305
Query: 58 QATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHC 117
TT T + A+++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC
Sbjct: 306 GNTTVTVEDAATAA----ANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHC 361
Query: 118 AENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+ENKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 362 SENKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 398
>gi|380020466|ref|XP_003694104.1| PREDICTED: transcription factor RFX3-like [Apis florea]
Length = 825
Score = 158 bits (400), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 86/157 (54%), Positives = 109/157 (69%), Gaps = 16/157 (10%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPH-ENTEV-------AYIVDEPA 57
QL+ NGTYLIQQ+V +PT HA I A TA R SP EN E AY++ +
Sbjct: 247 GQLLSQGNGTYLIQQSVVDGDPTAHALISAATA-RASPQTENAETVVSGGGGAYLISGNS 305
Query: 58 QATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHC 117
+T T + A+++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC
Sbjct: 306 GSTAVTVEDAATAA----ANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHC 361
Query: 118 AENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+ENKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 362 SENKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 398
>gi|332016778|gb|EGI57599.1| Transcription factor RFX3 [Acromyrmex echinatior]
Length = 906
Score = 156 bits (394), Expect = 3e-36, Method: Compositional matrix adjust.
Identities = 82/151 (54%), Positives = 107/151 (70%), Gaps = 8/151 (5%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSN 65
QL+ NGTYLIQQ+V +PT T+I+ +R SP T A +V A + N
Sbjct: 332 GQLLSQGNGTYLIQQSVVDADPTH--TLISAATTRTSPPTETAEA-VVSGGGGAYLISGN 388
Query: 66 TGDPLSPDNQ--ASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLD 123
+GD + A+++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC+ENKLD
Sbjct: 389 SGDMTGAVEEVAANVTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHCSENKLD 448
Query: 124 AVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 449 PVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 479
>gi|156554603|ref|XP_001604716.1| PREDICTED: transcription factor RFX3-like isoform 1 [Nasonia
vitripennis]
Length = 806
Score = 155 bits (392), Expect = 5e-36, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 116/165 (70%), Gaps = 21/165 (12%)
Query: 5 SNAPAQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPH-ENTEV-------AYIV 53
S QL+ NGTYLIQQ+V +P HA I A A+R SP E+ E AY++
Sbjct: 214 STTTGQLLSQGNGTYLIQQSVVDTDPATHALISAAAAARASPQTESAEAVVSGGGGAYLI 273
Query: 54 DEPAQATTATSNTGDPLSPDNQAS----LSHVTKISPATVQWLIDNYETAEGVSLPRSSL 109
+TTAT+ P+S ++ A+ ++H T++S ATVQWL++NYETA+GVSLPRS+L
Sbjct: 274 S--GNSTTATA----PVSVEDAATAAANMTHATRVSQATVQWLLENYETADGVSLPRSTL 327
Query: 110 FNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+NHY+RHC++NKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 328 YNHYLRHCSDNKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 372
>gi|189241300|ref|XP_975182.2| PREDICTED: similar to GA19507-PA [Tribolium castaneum]
Length = 738
Score = 154 bits (388), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 110/154 (71%), Gaps = 14/154 (9%)
Query: 5 SNAPAQLIG--NVNGTYLIQQTVEPTEHATIIATTASRDSPHE-NTEVAYIVDEPAQATT 61
S+A A +G +G Y++QQ V+P T+IA+T R+SP N E +Y+ AT
Sbjct: 161 SSATAGTVGYSTTSGHYVVQQAVDPD---TLIAST--RNSPQTTNAEPSYVATATVHATQ 215
Query: 62 ATSNTGDPLSPDNQAS-LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
+ +P+S + S L H T++SPATVQWL++NYETAEGVSLPRS+L+ HY+RHCAEN
Sbjct: 216 S-----NPVSNEEVGSALGHATRVSPATVQWLLENYETAEGVSLPRSTLYAHYLRHCAEN 270
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
KL+ VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 271 KLEPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 304
>gi|270013165|gb|EFA09613.1| hypothetical protein TcasGA2_TC011734 [Tribolium castaneum]
Length = 782
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 110/154 (71%), Gaps = 14/154 (9%)
Query: 5 SNAPAQLIG--NVNGTYLIQQTVEPTEHATIIATTASRDSPHE-NTEVAYIVDEPAQATT 61
S+A A +G +G Y++QQ V+P T+IA+T R+SP N E +Y+ AT
Sbjct: 205 SSATAGTVGYSTTSGHYVVQQAVDPD---TLIAST--RNSPQTTNAEPSYVATATVHATQ 259
Query: 62 ATSNTGDPLSPDNQAS-LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
+ +P+S + S L H T++SPATVQWL++NYETAEGVSLPRS+L+ HY+RHCAEN
Sbjct: 260 S-----NPVSNEEVGSALGHATRVSPATVQWLLENYETAEGVSLPRSTLYAHYLRHCAEN 314
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
KL+ VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 315 KLEPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 348
>gi|383851469|ref|XP_003701255.1| PREDICTED: transcription factor RFX3-like [Megachile rotundata]
Length = 868
Score = 154 bits (388), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/157 (54%), Positives = 110/157 (70%), Gaps = 16/157 (10%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPH-ENTEV-------AYIVDEPA 57
QL+ NGTYLIQQ+V +PT HA +I+ A+R SP EN E AY++ +
Sbjct: 290 GQLLSQGNGTYLIQQSVVDGDPTTHA-LISAAAARASPQTENAETVVSGGGGAYLISGNS 348
Query: 58 QATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHC 117
TT T + A+++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC
Sbjct: 349 GGTTVTVED----AAAAAANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHC 404
Query: 118 AENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+ENKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 405 SENKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 441
>gi|322800170|gb|EFZ21255.1| hypothetical protein SINV_04732 [Solenopsis invicta]
Length = 779
Score = 152 bits (384), Expect = 4e-35, Method: Compositional matrix adjust.
Identities = 84/151 (55%), Positives = 109/151 (72%), Gaps = 8/151 (5%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSN 65
QL+ NGTYLIQQ+V +PT HA +I+ A+R SP T A +V A + N
Sbjct: 226 GQLLSQGNGTYLIQQSVVDGDPT-HA-LISAAAARASPQTETAEA-VVSGGGGAYLISGN 282
Query: 66 TGDPLS--PDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLD 123
+G + A+++H T++S ATVQWL++NYETA+GVSLPRS+L+NHY+RHC+ENKLD
Sbjct: 283 SGGATVTVEETAANVTHATRVSQATVQWLLENYETADGVSLPRSTLYNHYLRHCSENKLD 342
Query: 124 AVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 343 PVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 373
>gi|328707501|ref|XP_001943107.2| PREDICTED: DNA-binding protein RFX2-like isoform 1 [Acyrthosiphon
pisum]
Length = 763
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 14/154 (9%)
Query: 9 AQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHE--NTEVAYIVDEPAQATTATSNT 66
AQ+IGN GTY+IQQ V+ +H TIIAT A RDSP+ +++V+Y+ A T +T+ +
Sbjct: 186 AQIIGN--GTYIIQQNVD-NDH-TIIAT-AQRDSPNSVISSDVSYLTVN-ATETGSTNPS 239
Query: 67 GDPLSP------DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
D L+ + L H +ISPATV WL++NYE AEGVSLPRS+L+NHY+ HC+E
Sbjct: 240 IDQLNGVESDGGMQNSGLMHANRISPATVNWLMENYEMAEGVSLPRSTLYNHYLTHCSET 299
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
K+D VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 300 KIDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKY 333
>gi|328707503|ref|XP_003243416.1| PREDICTED: DNA-binding protein RFX2-like isoform 2 [Acyrthosiphon
pisum]
gi|328707505|ref|XP_003243417.1| PREDICTED: DNA-binding protein RFX2-like isoform 3 [Acyrthosiphon
pisum]
Length = 780
Score = 149 bits (376), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 85/154 (55%), Positives = 111/154 (72%), Gaps = 14/154 (9%)
Query: 9 AQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHE--NTEVAYIVDEPAQATTATSNT 66
AQ+IGN GTY+IQQ V+ +H TIIAT A RDSP+ +++V+Y+ A T +T+ +
Sbjct: 203 AQIIGN--GTYIIQQNVD-NDH-TIIAT-AQRDSPNSVISSDVSYLTVN-ATETGSTNPS 256
Query: 67 GDPLSP------DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
D L+ + L H +ISPATV WL++NYE AEGVSLPRS+L+NHY+ HC+E
Sbjct: 257 IDQLNGVESDGGMQNSGLMHANRISPATVNWLMENYEMAEGVSLPRSTLYNHYLTHCSET 316
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
K+D VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 317 KIDPVNAASFGKLIRSVFMGLRTRRLGTRGNSKY 350
>gi|307200848|gb|EFN80901.1| Transcription factor RFX3 [Harpegnathos saltator]
Length = 866
Score = 148 bits (374), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 84/155 (54%), Positives = 108/155 (69%), Gaps = 12/155 (7%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATS- 64
QL+ NGTYLIQQ+V +PT HA +++ A+R SP TE A V T S
Sbjct: 290 GQLLSQGNGTYLIQQSVVDGDPTTHA-LMSAAAARASPQ--TETAETVVSGGGGTYLISG 346
Query: 65 NTGDPLSPDNQA-----SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
N+G +A +++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC+E
Sbjct: 347 NSGGATVTVEEAAAAAANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHCSE 406
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
NKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 407 NKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 441
>gi|350424614|ref|XP_003493854.1| PREDICTED: transcription factor RFX3-like [Bombus impatiens]
Length = 825
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 83/156 (53%), Positives = 106/156 (67%), Gaps = 14/156 (8%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEV-------AYIVDEPAQ 58
QL+ NGTYLIQQ+V +PT HA I A A EN E AY++ +
Sbjct: 247 GQLLSQGNGTYLIQQSVVDGDPTAHALISAAAARASPQTENAETVVSGGGGAYLISGNSG 306
Query: 59 ATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCA 118
+TT T + A+++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC+
Sbjct: 307 STTVTVED----AAAAAANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHCS 362
Query: 119 ENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
ENKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 363 ENKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 398
>gi|170035480|ref|XP_001845597.1| rfx transcription factor [Culex quinquefasciatus]
gi|167877509|gb|EDS40892.1| rfx transcription factor [Culex quinquefasciatus]
Length = 626
Score = 146 bits (369), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 76/130 (58%), Positives = 95/130 (73%), Gaps = 6/130 (4%)
Query: 25 VEPTEHATIIATTAS-----RDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQASLS 79
+ P + AT++ T A+ RDSP T+VA + + + + + S T P D SLS
Sbjct: 106 IVPVDEATLLGTAATTNGHQRDSPQAMTDVASYLHQASSSHHSNSTTPTP-DMDPTPSLS 164
Query: 80 HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFI 139
H T++SPATV WL++NYE AEGVSLPRS+L+NHY+RHC E+KLDAVNAASFGKLIRSVF
Sbjct: 165 HATRVSPATVAWLVENYENAEGVSLPRSTLYNHYMRHCNEHKLDAVNAASFGKLIRSVFT 224
Query: 140 GLRTRRLGTR 149
GLRTRRLGTR
Sbjct: 225 GLRTRRLGTR 234
>gi|340726742|ref|XP_003401712.1| PREDICTED: transcription factor RFX3-like [Bombus terrestris]
Length = 825
Score = 145 bits (365), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 82/156 (52%), Positives = 105/156 (67%), Gaps = 14/156 (8%)
Query: 9 AQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEV-------AYIVDEPAQ 58
QL+ NGTYLIQQ+V +PT HA I A A EN E AY++ +
Sbjct: 247 GQLLSQGNGTYLIQQSVVDGDPTAHALISAAAARASPQTENAETVVSGGGGAYLISGNSG 306
Query: 59 ATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCA 118
+T T + A+++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC+
Sbjct: 307 STAVTVED----AAAAAANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHCS 362
Query: 119 ENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
ENKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 363 ENKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 398
>gi|307176958|gb|EFN66264.1| Transcription factor RFX3 [Camponotus floridanus]
Length = 798
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 83/157 (52%), Positives = 107/157 (68%), Gaps = 10/157 (6%)
Query: 6 NAPAQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTA 62
+A QL+ NGTYLIQQ+V +PT HA I A A SP T A +V A
Sbjct: 217 SATGQLLSQGNGTYLIQQSVVDGDPTAHALISAAAARA-SPQTETAEA-VVSGSGGAYLI 274
Query: 63 TSNTGDPLSPDNQA-----SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHC 117
+ N+G +A +++H T++S ATV WL++NYETA+GVSLPRS+L+NHY+RHC
Sbjct: 275 SGNSGGTTVTVEEAAAAAANMTHATRVSQATVHWLLENYETADGVSLPRSTLYNHYLRHC 334
Query: 118 AENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
++NKLD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 335 SDNKLDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 371
>gi|363743679|ref|XP_003642893.1| PREDICTED: DNA-binding protein RFX2 isoform 1 [Gallus gallus]
Length = 700
Score = 138 bits (348), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 61/73 (83%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SLSH ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 168 SLSHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 227
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 228 VFMGLRTRRLGTR 240
>gi|26334223|dbj|BAC30829.1| unnamed protein product [Mus musculus]
Length = 388
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 71/78 (91%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S++H T+ SPAT+QWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 147 SVTHTTRASPATLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRS 206
Query: 137 VFIGLRTRRLGTRRGWRF 154
+F+GLRTRRLGTR ++
Sbjct: 207 IFMGLRTRRLGTRGNSKY 224
>gi|403295978|ref|XP_003938898.1| PREDICTED: DNA-binding protein RFX2 [Saimiri boliviensis
boliviensis]
Length = 698
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|402903897|ref|XP_003914791.1| PREDICTED: DNA-binding protein RFX2 isoform 1 [Papio anubis]
Length = 698
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|441628625|ref|XP_004089380.1| PREDICTED: DNA-binding protein RFX2 isoform 2 [Nomascus leucogenys]
Length = 702
Score = 137 bits (344), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|73987045|ref|XP_868416.1| PREDICTED: DNA-binding protein RFX2 isoform 4 [Canis lupus
familiaris]
Length = 702
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 168 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 227
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 228 VFMGLRTRRLGTR 240
>gi|410220666|gb|JAA07552.1| regulatory factor X, 2 (influences HLA class II expression) [Pan
troglodytes]
gi|410297196|gb|JAA27198.1| regulatory factor X, 2 (influences HLA class II expression) [Pan
troglodytes]
gi|410332817|gb|JAA35355.1| regulatory factor X, 2 (influences HLA class II expression) [Pan
troglodytes]
Length = 698
Score = 136 bits (343), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|261858644|dbj|BAI45844.1| regulatory factor X, 2 [synthetic construct]
Length = 698
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|19743879|ref|NP_602309.1| DNA-binding protein RFX2 isoform b [Homo sapiens]
gi|119589522|gb|EAW69116.1| regulatory factor X, 2 (influences HLA class II expression),
isoform CRA_e [Homo sapiens]
Length = 698
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|158255828|dbj|BAF83885.1| unnamed protein product [Homo sapiens]
Length = 698
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 163 SLAHTSRPSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 222
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 223 VFMGLRTRRLGTR 235
>gi|338726605|ref|XP_001495252.2| PREDICTED: DNA-binding protein RFX2 isoform 2 [Equus caballus]
Length = 652
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 118 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 177
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 178 VFMGLRTRRLGTR 190
>gi|390357206|ref|XP_790942.3| PREDICTED: transcription factor RFX3 [Strongylocentrotus
purpuratus]
Length = 720
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 59/77 (76%), Positives = 70/77 (90%)
Query: 78 LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSV 137
++H T+ SPATVQWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRSV
Sbjct: 192 ITHTTRASPATVQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSV 251
Query: 138 FIGLRTRRLGTRRGWRF 154
F+GLRTRRLGTR ++
Sbjct: 252 FLGLRTRRLGTRGNSKY 268
>gi|193785851|dbj|BAG51286.1| unnamed protein product [Homo sapiens]
Length = 653
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 118 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 177
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 178 VFMGLRTRRLGTR 190
>gi|242004803|ref|XP_002423266.1| DNA-binding protein RFX2, putative [Pediculus humanus corporis]
gi|212506268|gb|EEB10528.1| DNA-binding protein RFX2, putative [Pediculus humanus corporis]
Length = 744
Score = 136 bits (343), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/135 (54%), Positives = 96/135 (71%), Gaps = 13/135 (9%)
Query: 18 TYLIQQTVEPTEHATIIATTASRDSP---HENTEVAYIVDEPAQATTATSNTGDPLSPDN 74
TYLIQ TV+ TII T SR SP + + Y+V + A S G+ +
Sbjct: 193 TYLIQPTVDHESAHTII--TGSRTSPDTVNADGSGVYMVS----SNNAVSMDGERID--- 243
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+++S+ T++SPATVQWL++NYE EGVSLPRS+++ HY+RHC+E+KLD VNAASFGKLI
Sbjct: 244 -SNISNATRVSPATVQWLLENYECFEGVSLPRSTMYAHYLRHCSEHKLDPVNAASFGKLI 302
Query: 135 RSVFIGLRTRRLGTR 149
RSVF+GLRTRRLGTR
Sbjct: 303 RSVFLGLRTRRLGTR 317
>gi|291415560|ref|XP_002724020.1| PREDICTED: regulatory factor X2-like [Oryctolagus cuniculus]
Length = 647
Score = 136 bits (342), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 60/73 (82%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H + SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 158 SLAHTARSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 217
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 218 VFMGLRTRRLGTR 230
>gi|426229095|ref|XP_004008628.1| PREDICTED: DNA-binding protein RFX2 isoform 2 [Ovis aries]
Length = 698
Score = 135 bits (340), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
+L+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 169 TLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRS 228
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 229 VFMGLRTRRLGTR 241
>gi|449514466|ref|XP_004177216.1| PREDICTED: transcription factor RFX3 isoform 4 [Taeniopygia
guttata]
Length = 724
Score = 135 bits (339), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
+++H T+ SPAT+QWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 147 TVTHTTRASPATLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRS 206
Query: 137 VFIGLRTRRLGTR 149
+F+GLRTRRLGTR
Sbjct: 207 IFMGLRTRRLGTR 219
>gi|444511961|gb|ELV10011.1| DNA-binding protein RFX2 [Tupaia chinensis]
Length = 652
Score = 135 bits (339), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+K+D VNAASFGKLIRS
Sbjct: 118 SLAHTSRSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKVDPVNAASFGKLIRS 177
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 178 VFMGLRTRRLGTR 190
>gi|449514464|ref|XP_004177215.1| PREDICTED: transcription factor RFX3 isoform 3 [Taeniopygia
guttata]
Length = 742
Score = 134 bits (338), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 57/73 (78%), Positives = 69/73 (94%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
+++H T+ SPAT+QWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRS
Sbjct: 147 TVTHTTRASPATLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRS 206
Query: 137 VFIGLRTRRLGTR 149
+F+GLRTRRLGTR
Sbjct: 207 IFMGLRTRRLGTR 219
>gi|6677731|ref|NP_033082.1| DNA-binding protein RFX2 isoform 2 [Mus musculus]
gi|452420|emb|CAA53703.1| DNA binding protein RFX2 [Mus musculus]
gi|13435554|gb|AAH04654.1| Regulatory factor X, 2 (influences HLA class II expression) [Mus
musculus]
gi|148706259|gb|EDL38206.1| regulatory factor X, 2 (influences HLA class II expression),
isoform CRA_b [Mus musculus]
Length = 692
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H + SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KL+ VNAASFGKLIRS
Sbjct: 158 SLAHTARSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLEPVNAASFGKLIRS 217
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 218 VFMGLRTRRLGTR 230
>gi|157822591|ref|NP_001100347.1| DNA-binding protein RFX2 [Rattus norvegicus]
gi|254797631|sp|B2GV50.1|RFX2_RAT RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|149028165|gb|EDL83603.1| similar to DNA-binding protein RFX2 [Rattus norvegicus]
gi|183986563|gb|AAI66527.1| Regulatory factor X, 2 (influences HLA class II expression) [Rattus
norvegicus]
Length = 692
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H + SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KL+ VNAASFGKLIRS
Sbjct: 158 SLAHTARSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLEPVNAASFGKLIRS 217
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 218 VFMGLRTRRLGTR 230
>gi|351712185|gb|EHB15104.1| DNA-binding protein RFX2 [Heterocephalus glaber]
Length = 827
Score = 134 bits (337), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/73 (80%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H + SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KLD VNAASFGKLIRS
Sbjct: 174 SLAHTARSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLDPVNAASFGKLIRS 233
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 234 VFMGLRTRRLGTR 246
>gi|350579267|ref|XP_003353577.2| PREDICTED: transcription factor RFX3-like, partial [Sus scrofa]
Length = 325
Score = 134 bits (336), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 160 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 205
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 206 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 258
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 259 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 291
>gi|405976132|gb|EKC40651.1| Transcription factor RFX3 [Crassostrea gigas]
Length = 1006
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 58/77 (75%), Positives = 67/77 (87%)
Query: 78 LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSV 137
L+H T+ SPATVQWLIDNYETAEGVSLPRS+L+NHY+RHC E LD +N ASFGKLIRSV
Sbjct: 424 LTHTTRASPATVQWLIDNYETAEGVSLPRSTLYNHYLRHCQEQNLDPMNPASFGKLIRSV 483
Query: 138 FIGLRTRRLGTRRGWRF 154
F+GLRTRRLGTR ++
Sbjct: 484 FLGLRTRRLGTRGNSKY 500
>gi|344247182|gb|EGW03286.1| Transcription factor RFX3 [Cricetulus griseus]
Length = 298
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 74/148 (50%), Positives = 96/148 (64%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A E Q +
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMAI---ETLQKS- 169
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 170 ------DGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|449678816|ref|XP_002157607.2| PREDICTED: transcription factor RFX3-like [Hydra magnipapillata]
Length = 800
Score = 133 bits (335), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 57/84 (67%), Positives = 74/84 (88%)
Query: 71 SPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF 130
S + + +SH T+ SP TVQWLI+NYETA+GVSLPRS+L++HY+RHC+E+K+DAVNAASF
Sbjct: 263 SANQRVPISHTTRASPMTVQWLIENYETADGVSLPRSTLYSHYLRHCSESKIDAVNAASF 322
Query: 131 GKLIRSVFIGLRTRRLGTRRGWRF 154
GKLIRSVF+GL+TRRLGTR ++
Sbjct: 323 GKLIRSVFLGLKTRRLGTRGNSKY 346
>gi|355755529|gb|EHH59276.1| Transcription factor RFX1, partial [Macaca fascicularis]
Length = 756
Score = 133 bits (334), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 411 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 470
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 471 VFMGLRTRRLGTRGNSKY 488
>gi|354479220|ref|XP_003501811.1| PREDICTED: DNA-binding protein RFX2 isoform 2 [Cricetulus griseus]
gi|344237633|gb|EGV93736.1| DNA-binding protein RFX2 [Cricetulus griseus]
Length = 692
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H + SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KL+ VNAASFGKLIRS
Sbjct: 158 SLAHTARSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLEPVNAASFGKLIRS 217
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 218 VFMGLRTRRLGTR 230
>gi|354479222|ref|XP_003501812.1| PREDICTED: DNA-binding protein RFX2 isoform 3 [Cricetulus griseus]
Length = 695
Score = 132 bits (333), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H + SPAT+QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KL+ VNAASFGKLIRS
Sbjct: 161 SLAHTARSSPATLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLEPVNAASFGKLIRS 220
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 221 VFMGLRTRRLGTR 233
>gi|344297681|ref|XP_003420525.1| PREDICTED: transcription factor RFX3-like [Loxodonta africana]
Length = 749
Score = 132 bits (332), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 76/153 (49%), Positives = 98/153 (64%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ A QLI + GTYLI ++E + H T+ TT R SP E+A
Sbjct: 118 IQMGVAGGQLISSSGGTYLIGNSMENSGH-TVTHTT--RASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|296233095|ref|XP_002807861.1| PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
[Callithrix jacchus]
Length = 830
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 425 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 484
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 485 VFMGLRTRRLGTRGNSKY 502
>gi|344307108|ref|XP_003422224.1| PREDICTED: hypothetical protein LOC100661020 [Loxodonta africana]
Length = 1152
Score = 132 bits (331), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 68/73 (93%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
SL+H ++ SPAT+QWL+DNYETAEGVSLP+SSL+NHY++HC E+KLD VNAASFGKLIRS
Sbjct: 1032 SLAHTSRWSPATLQWLLDNYETAEGVSLPKSSLYNHYLQHCQEHKLDPVNAASFGKLIRS 1091
Query: 137 VFIGLRTRRLGTR 149
VF GLRTRRLGTR
Sbjct: 1092 VFAGLRTRRLGTR 1104
>gi|238859557|ref|NP_002909.4| MHC class II regulatory factor RFX1 [Homo sapiens]
gi|288558824|sp|P22670.2|RFX1_HUMAN RecName: Full=MHC class II regulatory factor RFX1; AltName:
Full=Enhancer factor C; Short=EF-C; AltName:
Full=Regulatory factor X 1; Short=RFX; AltName:
Full=Transcription factor RFX1
gi|119604793|gb|EAW84387.1| regulatory factor X, 1 (influences HLA class II expression) [Homo
sapiens]
Length = 979
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|33568|emb|CAA41730.1| MHC class II regulatory factor RFX [Homo sapiens]
gi|29436363|gb|AAH49826.1| Regulatory factor X, 1 (influences HLA class II expression) [Homo
sapiens]
gi|261858156|dbj|BAI45600.1| regulatory factor X, 1 [synthetic construct]
Length = 979
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|114675711|ref|XP_524133.2| PREDICTED: MHC class II regulatory factor RFX1 [Pan troglodytes]
gi|397487647|ref|XP_003814901.1| PREDICTED: MHC class II regulatory factor RFX1 [Pan paniscus]
Length = 979
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|432106141|gb|ELK32046.1| MHC class II regulatory factor RFX1 [Myotis davidii]
Length = 1000
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 413 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 472
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 473 VFMGLRTRRLGTRGNSKY 490
>gi|395850765|ref|XP_003797946.1| PREDICTED: MHC class II regulatory factor RFX1 [Otolemur garnettii]
Length = 982
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 430 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 489
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 490 VFMGLRTRRLGTRGNSKY 507
>gi|332253042|ref|XP_003275661.1| PREDICTED: MHC class II regulatory factor RFX1 [Nomascus
leucogenys]
Length = 979
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|301771274|ref|XP_002921039.1| PREDICTED: MHC class II regulatory factor RFX1-like [Ailuropoda
melanoleuca]
Length = 844
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 361 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 420
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 421 VFMGLRTRRLGTRGNSKY 438
>gi|45709612|gb|AAH67778.1| RFX3 protein [Homo sapiens]
Length = 413
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|431898044|gb|ELK06751.1| MHC class II regulatory factor RFX1 [Pteropus alecto]
Length = 979
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|402904486|ref|XP_003915074.1| PREDICTED: MHC class II regulatory factor RFX1 [Papio anubis]
Length = 979
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|297276292|ref|XP_001111344.2| PREDICTED: MHC class II regulatory factor RFX1 [Macaca mulatta]
Length = 991
Score = 132 bits (331), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 553 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 612
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 613 VFMGLRTRRLGTRGNSKY 630
>gi|403302207|ref|XP_003941754.1| PREDICTED: MHC class II regulatory factor RFX1 [Saimiri boliviensis
boliviensis]
Length = 980
Score = 131 bits (330), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 428 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 487
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 488 VFMGLRTRRLGTRGNSKY 505
>gi|426387475|ref|XP_004060192.1| PREDICTED: MHC class II regulatory factor RFX1 [Gorilla gorilla
gorilla]
Length = 979
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 427 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 486
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 487 VFMGLRTRRLGTRGNSKY 504
>gi|348565207|ref|XP_003468395.1| PREDICTED: MHC class II regulatory factor RFX1-like [Cavia
porcellus]
Length = 977
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 425 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 484
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 485 VFMGLRTRRLGTRGNSKY 502
>gi|297703804|ref|XP_002828818.1| PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
[Pongo abelii]
Length = 899
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 428 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 487
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 488 VFMGLRTRRLGTRGNSKY 505
>gi|324503810|gb|ADY41647.1| DNA-binding protein RFX2 [Ascaris suum]
Length = 887
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 96/155 (61%), Gaps = 21/155 (13%)
Query: 8 PAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSP--------HENTEVAYIVDEPAQA 59
P Q IG ++ Y + Q + T +AT + TT D P H ++ YI+ +
Sbjct: 178 PQQHIGTMDA-YPLGQHIN-TANATYVYTT---DYPPYYQYQPLHSPSQPTYIIQQ---- 228
Query: 60 TTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
N+ + D A L H T+ SPAT+QWLI+NYE A+G SLPR +L++HYI+HC E
Sbjct: 229 ----QNSPGSVDEDTSAQLGHTTRASPATIQWLINNYEPADGTSLPRCTLYSHYIKHCNE 284
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
NKL+ VNAASFGKLIRSVF GLRTRRLGTR ++
Sbjct: 285 NKLEPVNAASFGKLIRSVFHGLRTRRLGTRGNSKY 319
>gi|327263459|ref|XP_003216537.1| PREDICTED: transcription factor RFX3-like [Anolis carolinensis]
Length = 749
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSTGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|119579198|gb|EAW58794.1| regulatory factor X, 3 (influences HLA class II expression),
isoform CRA_a [Homo sapiens]
Length = 540
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|26350635|dbj|BAC38954.1| unnamed protein product [Mus musculus]
Length = 963
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 412 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 471
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 472 VFMGLRTRRLGTRGNSKY 489
>gi|395512976|ref|XP_003760708.1| PREDICTED: MHC class II regulatory factor RFX1 [Sarcophilus
harrisii]
Length = 966
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 415 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 474
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 475 VFMGLRTRRLGTRGNSKY 492
>gi|239916007|ref|NP_033081.3| MHC class II regulatory factor RFX1 [Mus musculus]
gi|341941965|sp|P48377.2|RFX1_MOUSE RecName: Full=MHC class II regulatory factor RFX1; AltName:
Full=Regulatory factor X 1; AltName: Full=Transcription
factor RFX1
gi|34784952|gb|AAH57018.1| Regulatory factor X, 1 (influences HLA class II expression) [Mus
musculus]
gi|148678983|gb|EDL10930.1| regulatory factor X, 1 (influences HLA class II expression) [Mus
musculus]
Length = 963
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 412 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 471
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 472 VFMGLRTRRLGTRGNSKY 489
>gi|452418|emb|CAA53702.1| DNA binding protein RFX1 [Mus musculus]
Length = 963
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 412 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 471
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 472 VFMGLRTRRLGTRGNSKY 489
>gi|432095901|gb|ELK26821.1| Transcription factor RFX3 [Myotis davidii]
Length = 543
Score = 131 bits (330), Expect = 8e-29, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 35 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 78
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 79 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 131
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 132 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 166
>gi|311248970|ref|XP_003123399.1| PREDICTED: MHC class II regulatory factor RFX1 [Sus scrofa]
Length = 973
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 421 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 480
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 481 VFMGLRTRRLGTRGNSKY 498
>gi|73986799|ref|XP_542024.2| PREDICTED: MHC class II regulatory factor RFX1 [Canis lupus
familiaris]
Length = 973
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 421 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 480
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 481 VFMGLRTRRLGTRGNSKY 498
>gi|327264025|ref|XP_003216817.1| PREDICTED: MHC class II regulatory factor RFX1-like [Anolis
carolinensis]
Length = 970
Score = 131 bits (330), Expect = 9e-29, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 418 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 477
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 478 VFMGLRTRRLGTRGNSKY 495
>gi|395740509|ref|XP_002819878.2| PREDICTED: transcription factor RFX3 isoform 2 [Pongo abelii]
Length = 717
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 128 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 173
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 174 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 226
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 227 LDPVNAASFGKLIRSIFMGLRTRRLGTR 254
>gi|114623630|ref|XP_520464.2| PREDICTED: transcription factor RFX3 isoform 5 [Pan troglodytes]
Length = 739
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|354479569|ref|XP_003501982.1| PREDICTED: MHC class II regulatory factor RFX1 [Cricetulus griseus]
Length = 965
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 414 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 473
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 474 VFMGLRTRRLGTRGNSKY 491
>gi|157786958|ref|NP_001099414.1| MHC class II regulatory factor RFX1 [Rattus norvegicus]
gi|149037880|gb|EDL92240.1| regulatory factor X, 1 (influences HLA class II expression)
(predicted) [Rattus norvegicus]
Length = 964
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 413 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 472
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 473 VFMGLRTRRLGTRGNSKY 490
>gi|410977986|ref|XP_003995379.1| PREDICTED: transcription factor RFX3 isoform 1 [Felis catus]
gi|410977988|ref|XP_003995380.1| PREDICTED: transcription factor RFX3 isoform 2 [Felis catus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|354497045|ref|XP_003510633.1| PREDICTED: transcription factor RFX3-like [Cricetulus griseus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|363744398|ref|XP_003643038.1| PREDICTED: transcription factor RFX3-like [Gallus gallus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRTSP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|351713625|gb|EHB16544.1| Transcription factor RFX3 [Heterocephalus glaber]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|301622686|ref|XP_002940666.1| PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor
RFX1-like [Xenopus (Silurana) tropicalis]
Length = 957
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 303 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 362
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 363 VFMGLRTRRLGTR 375
>gi|126335607|ref|XP_001364935.1| PREDICTED: transcription factor RFX3 [Monodelphis domestica]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|26325973|dbj|BAC26730.1| unnamed protein product [Mus musculus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|395819141|ref|XP_003782958.1| PREDICTED: transcription factor RFX3 [Otolemur garnettii]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|351711533|gb|EHB14452.1| MHC class II regulatory factor RFX1, partial [Heterocephalus
glaber]
Length = 871
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 372 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 431
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 432 VFMGLRTRRLGTRGNSKY 449
>gi|297477836|ref|XP_002689661.1| PREDICTED: transcription factor RFX3 [Bos taurus]
gi|296484788|tpg|DAA26903.1| TPA: regulatory factor X, 3 (influences HLA class II expression)
[Bos taurus]
gi|440905255|gb|ELR55659.1| Transcription factor RFX3 [Bos grunniens mutus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|73946688|ref|XP_533540.2| PREDICTED: transcription factor RFX3 isoform 1 [Canis lupus
familiaris]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|34328189|ref|NP_035395.2| transcription factor RFX3 [Mus musculus]
gi|261878533|ref|NP_001159886.1| transcription factor RFX3 [Mus musculus]
gi|32172438|sp|P48381.2|RFX3_MOUSE RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory
factor X 3
gi|17160843|gb|AAH17598.1| Regulatory factor X, 3 (influences HLA class II expression) [Mus
musculus]
gi|148709706|gb|EDL41652.1| regulatory factor X, 3 (influences HLA class II expression) [Mus
musculus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|444722390|gb|ELW63087.1| Transcription factor RFX3 [Tupaia chinensis]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|149062647|gb|EDM13070.1| rCG47137 [Rattus norvegicus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|321473214|gb|EFX84182.1| hypothetical protein DAPPUDRAFT_47307 [Daphnia pulex]
Length = 613
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/147 (51%), Positives = 89/147 (60%), Gaps = 18/147 (12%)
Query: 3 QVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTA 62
Q+ P QL GT+LIQQ V+ H I TT +R SP + V +I
Sbjct: 7 QLQVTPGQLTQTSGGTFLIQQGVDADGHTLI--TTTTRASPQTSLSVLFIF--------P 56
Query: 63 TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL 122
TS + D H VQWLIDNYETAEGVSLPRS+L+ HY+RHC E+KL
Sbjct: 57 TSCINLRIKMDR--FFVH------QKVQWLIDNYETAEGVSLPRSTLYAHYLRHCNEHKL 108
Query: 123 DAVNAASFGKLIRSVFIGLRTRRLGTR 149
+ VNAASFGKLIRSVF+GLRTRRLGTR
Sbjct: 109 EPVNAASFGKLIRSVFLGLRTRRLGTR 135
>gi|158260103|dbj|BAF82229.1| unnamed protein product [Homo sapiens]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTPTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|395515976|ref|XP_003762173.1| PREDICTED: transcription factor RFX3 [Sarcophilus harrisii]
Length = 759
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 128 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 171
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 172 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 224
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 225 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 254
>gi|297271002|ref|XP_001086729.2| PREDICTED: transcription factor RFX3 isoform 6 [Macaca mulatta]
Length = 782
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/153 (47%), Positives = 96/153 (62%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 151 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 196
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 197 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 249
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 250 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 282
>gi|4506495|ref|NP_002910.1| transcription factor RFX3 isoform a [Homo sapiens]
gi|452404|emb|CAA53706.1| DNA binding protein RFX3 [Homo sapiens]
gi|119579199|gb|EAW58795.1| regulatory factor X, 3 (influences HLA class II expression),
isoform CRA_b [Homo sapiens]
gi|119579203|gb|EAW58799.1| regulatory factor X, 3 (influences HLA class II expression),
isoform CRA_b [Homo sapiens]
Length = 707
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|426220384|ref|XP_004004396.1| PREDICTED: transcription factor RFX3 isoform 1 [Ovis aries]
gi|426220386|ref|XP_004004397.1| PREDICTED: transcription factor RFX3 isoform 2 [Ovis aries]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|291383308|ref|XP_002708228.1| PREDICTED: regulatory factor X, 3 (influences HLA class II
expression) [Oryctolagus cuniculus]
Length = 749
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|111305724|gb|AAI21501.1| rfx3 protein [Xenopus (Silurana) tropicalis]
Length = 783
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 91/150 (60%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ Q+I + GTYLI +E + H+ T AS PA
Sbjct: 152 IQMGVTGGQIISSTGGTYLIGNAMENSGHSVSHTTRAS----------------PATIEM 195
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS SH + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 196 AIETLQKSDGLS-------SHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 248
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 249 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 278
>gi|348573067|ref|XP_003472313.1| PREDICTED: transcription factor RFX3-like [Cavia porcellus]
Length = 709
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|119900355|ref|XP_618263.3| PREDICTED: transcription factor RFX3, partial [Bos taurus]
Length = 677
Score = 131 bits (329), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 46 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 89
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 90 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 142
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 143 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 172
>gi|402897525|ref|XP_003911805.1| PREDICTED: transcription factor RFX3 [Papio anubis]
Length = 741
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|301767436|ref|XP_002919144.1| PREDICTED: transcription factor RFX3-like [Ailuropoda melanoleuca]
Length = 749
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|19743884|ref|NP_602304.1| transcription factor RFX3 isoform b [Homo sapiens]
gi|32172437|sp|P48380.2|RFX3_HUMAN RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory
factor X 3
gi|18380934|gb|AAH22191.1| Regulatory factor X, 3 (influences HLA class II expression) [Homo
sapiens]
gi|119579200|gb|EAW58796.1| regulatory factor X, 3 (influences HLA class II expression),
isoform CRA_c [Homo sapiens]
gi|119579202|gb|EAW58798.1| regulatory factor X, 3 (influences HLA class II expression),
isoform CRA_c [Homo sapiens]
gi|261858730|dbj|BAI45887.1| regulatory factor X, 3 [synthetic construct]
Length = 749
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|431898650|gb|ELK07030.1| Transcription factor RFX3 [Pteropus alecto]
Length = 756
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/148 (49%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 125 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 170
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 171 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 223
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 224 LDPVNAASFGKLIRSIFMGLRTRRLGTR 251
>gi|343958852|dbj|BAK63281.1| transcription factor RFX3 [Pan troglodytes]
Length = 749
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|296189854|ref|XP_002806534.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor RFX3
[Callithrix jacchus]
gi|332249547|ref|XP_003273919.1| PREDICTED: transcription factor RFX3 isoform 1 [Nomascus
leucogenys]
gi|332249549|ref|XP_003273920.1| PREDICTED: transcription factor RFX3 isoform 2 [Nomascus
leucogenys]
gi|397505732|ref|XP_003823404.1| PREDICTED: transcription factor RFX3 isoform 1 [Pan paniscus]
gi|397505734|ref|XP_003823405.1| PREDICTED: transcription factor RFX3 isoform 2 [Pan paniscus]
gi|403289106|ref|XP_003935709.1| PREDICTED: transcription factor RFX3 isoform 1 [Saimiri boliviensis
boliviensis]
gi|403289108|ref|XP_003935710.1| PREDICTED: transcription factor RFX3 isoform 2 [Saimiri boliviensis
boliviensis]
gi|426361189|ref|XP_004047804.1| PREDICTED: transcription factor RFX3 [Gorilla gorilla gorilla]
gi|355567796|gb|EHH24137.1| Regulatory factor X 3 [Macaca mulatta]
gi|355753379|gb|EHH57425.1| Regulatory factor X 3 [Macaca fascicularis]
Length = 749
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|281349305|gb|EFB24889.1| hypothetical protein PANDA_007728 [Ailuropoda melanoleuca]
Length = 677
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 46 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 89
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 90 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 142
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 143 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 172
>gi|344244537|gb|EGW00641.1| MHC class II regulatory factor RFX1 [Cricetulus griseus]
Length = 863
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 58/78 (74%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 312 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 371
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 372 VFMGLRTRRLGTRGNSKY 389
>gi|149736841|ref|XP_001491823.1| PREDICTED: transcription factor RFX3 isoform 1 [Equus caballus]
gi|338719694|ref|XP_003364046.1| PREDICTED: transcription factor RFX3 isoform 2 [Equus caballus]
Length = 749
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/155 (47%), Positives = 94/155 (60%), Gaps = 25/155 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|380800407|gb|AFE72079.1| transcription factor RFX3 isoform b, partial [Macaca mulatta]
Length = 717
Score = 130 bits (328), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 86 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 129
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 130 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 182
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 183 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 212
>gi|452881617|ref|NP_001263620.1| transcription factor RFX3 [Xenopus (Silurana) tropicalis]
gi|292630951|sp|Q0V9K5.2|RFX3_XENTR RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory
factor X 3
Length = 749
Score = 130 bits (328), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 91/150 (60%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ Q+I + GTYLI +E + H+ T AS PA
Sbjct: 118 IQMGVTGGQIISSTGGTYLIGNAMENSGHSVSHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS SH + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------SHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 215 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|449514461|ref|XP_004177214.1| PREDICTED: transcription factor RFX3 isoform 2 [Taeniopygia
guttata]
Length = 767
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/148 (50%), Positives = 95/148 (64%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H T+ TT R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGH-TVTHTT--RASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|224091292|ref|XP_002195859.1| PREDICTED: transcription factor RFX3 isoform 1 [Taeniopygia
guttata]
Length = 749
Score = 130 bits (327), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 97/153 (63%), Gaps = 21/153 (13%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H T+ TT R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGH-TVTHTT--RASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 249
>gi|47222197|emb|CAG11623.1| unnamed protein product [Tetraodon nigroviridis]
Length = 849
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 60/86 (69%), Positives = 68/86 (79%), Gaps = 8/86 (9%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPR SL+NHY+RHC E KLD VNAASFGKLIRSVF
Sbjct: 200 SHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLRHCQEQKLDPVNAASFGKLIRSVF 259
Query: 139 IGLRTRRLGTR--------RGWRFLS 156
+GLRTRRLGTR RGWR LS
Sbjct: 260 MGLRTRRLGTRYRQEEVGERGWRLLS 285
>gi|26332070|dbj|BAC29765.1| unnamed protein product [Mus musculus]
Length = 695
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 144 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 203
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 204 VFMGLRTRRLGTR 216
>gi|393909984|gb|EJD75673.1| transcription factor RFX3 [Loa loa]
Length = 817
Score = 130 bits (326), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Query: 53 VDEPAQATTATSNTGDP--LSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLF 110
+ P Q T G P + D A L H T+ SPAT+QWLI+NYE A+G SLPR +L+
Sbjct: 140 IHSPTQQTYVIQQQGSPGSVEEDVGAQLGHTTRASPATIQWLINNYEPADGTSLPRCTLY 199
Query: 111 NHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+HYI+HC ENKL+ VNAASFGKLIRSVF GLRTRRLGTR ++
Sbjct: 200 SHYIKHCNENKLEPVNAASFGKLIRSVFHGLRTRRLGTRGNSKY 243
>gi|170582623|ref|XP_001896213.1| RFX DNA-binding domain containing protein [Brugia malayi]
gi|158596633|gb|EDP34946.1| RFX DNA-binding domain containing protein [Brugia malayi]
Length = 701
Score = 130 bits (326), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 61/104 (58%), Positives = 74/104 (71%), Gaps = 2/104 (1%)
Query: 53 VDEPAQATTATSNTGDP--LSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLF 110
+ P Q T G P + D A L H T+ SPAT+QWLI+NYE A+G SLPR +L+
Sbjct: 24 IHSPTQQTYVIQQQGSPGSVEEDVGAQLGHTTRASPATIQWLINNYEPADGTSLPRCTLY 83
Query: 111 NHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+HYI+HC ENKL+ VNAASFGKLIRSVF GLRTRRLGTR ++
Sbjct: 84 SHYIKHCNENKLEPVNAASFGKLIRSVFHGLRTRRLGTRGNSKY 127
>gi|345308196|ref|XP_001506894.2| PREDICTED: transcription factor RFX3-like [Ornithorhynchus
anatinus]
Length = 929
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 73/150 (48%), Positives = 92/150 (61%), Gaps = 25/150 (16%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 299 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 342
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 343 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 395
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 396 HKLDPVNAASFGKLIRSIFMGLRTRRLGTR 425
>gi|195037194|ref|XP_001990049.1| GH18452 [Drosophila grimshawi]
gi|193894245|gb|EDV93111.1| GH18452 [Drosophila grimshawi]
Length = 918
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 88/131 (67%), Gaps = 15/131 (11%)
Query: 39 SRDSPHENT-EVAYIVDEPAQATT-------------ATSNTGDPLSPD-NQASLSHVTK 83
SRDSPH T EVAYI + + T + N D SPD +Q+++ K
Sbjct: 308 SRDSPHSLTHEVAYIQEAQSTPQTPTSTTTTNSASGGSIGNGADGASPDSDQSAMGTSNK 367
Query: 84 ISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRT 143
I+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAASFGKLIRSVF GLRT
Sbjct: 368 IASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAASFGKLIRSVFSGLRT 427
Query: 144 RRLGTRRGWRF 154
RRLGTR ++
Sbjct: 428 RRLGTRGNSKY 438
>gi|358412920|ref|XP_003582431.1| PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
[Bos taurus]
Length = 975
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL++NYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 423 SYSHTTRASPATVQWLLENYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 482
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 483 VFMGLRTRRLGTRGNSKY 500
>gi|195107915|ref|XP_001998539.1| GI24030 [Drosophila mojavensis]
gi|193915133|gb|EDW14000.1| GI24030 [Drosophila mojavensis]
Length = 829
Score = 129 bits (325), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 70/131 (53%), Positives = 88/131 (67%), Gaps = 15/131 (11%)
Query: 39 SRDSPHENT-EVAYIVDEPAQATT-------------ATSNTGDPLSPD-NQASLSHVTK 83
SRDSPH T EVAYI + + T + N D SPD +Q+++ K
Sbjct: 227 SRDSPHSLTHEVAYIQEAQSTPQTPTSTTTTNSASGGSIGNGADGASPDSDQSAMGTSNK 286
Query: 84 ISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRT 143
I+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAASFGKLIRSVF GLRT
Sbjct: 287 IASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAASFGKLIRSVFSGLRT 346
Query: 144 RRLGTRRGWRF 154
RRLGTR ++
Sbjct: 347 RRLGTRGNSKY 357
>gi|402587873|gb|EJW81807.1| hypothetical protein WUBG_07284, partial [Wuchereria bancrofti]
Length = 581
Score = 129 bits (325), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 61/99 (61%), Positives = 72/99 (72%), Gaps = 2/99 (2%)
Query: 53 VDEPAQATTATSNTGDP--LSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLF 110
+ P Q T G P + D A L H T+ SPAT+QWLI+NYE A+G SLPR +L+
Sbjct: 4 IHSPTQQTYVIQQQGSPGSVEEDVGAQLGHTTRASPATIQWLINNYEPADGTSLPRCTLY 63
Query: 111 NHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+HYI+HC ENKL+ VNAASFGKLIRSVF GLRTRRLGTR
Sbjct: 64 SHYIKHCNENKLEPVNAASFGKLIRSVFHGLRTRRLGTR 102
>gi|440912461|gb|ELR62027.1| MHC class II regulatory factor RFX1, partial [Bos grunniens mutus]
Length = 900
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 57/78 (73%), Positives = 67/78 (85%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL++NYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 375 SYSHTTRASPATVQWLLENYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 434
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 435 VFMGLRTRRLGTRGNSKY 452
>gi|157132141|ref|XP_001662483.1| rfx transcription factor [Aedes aegypti]
gi|108881768|gb|EAT45993.1| AAEL002795-PA, partial [Aedes aegypti]
Length = 656
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 76/150 (50%), Positives = 94/150 (62%), Gaps = 22/150 (14%)
Query: 22 QQTVEPTEHATIIATTAS-----RDSPHENTEVA-YI----VDEPAQATTATSNTGD--- 68
QQ + P + AT++ T A+ RDSP T+VA YI V + +TT T + G+
Sbjct: 74 QQYIVPVDEATLLGTAATNGAHQRDSPQAMTDVASYIQSHQVSHHSNSTTPTPDGGNLGY 133
Query: 69 --------PLSPDNQASLSHVTKISPAT-VQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
P P + + +T V WL+DNYE AEGVSLPRS+L+NHY+RHC E
Sbjct: 134 SIHRVVGCPGPPCCLFAFGFPEPVPLSTRVAWLVDNYENAEGVSLPRSTLYNHYMRHCNE 193
Query: 120 NKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+KLDAVNAASFGKLIRSVF GLRTRRLGTR
Sbjct: 194 HKLDAVNAASFGKLIRSVFTGLRTRRLGTR 223
>gi|345493442|ref|XP_003427073.1| PREDICTED: transcription factor RFX3-like isoform 2 [Nasonia
vitripennis]
Length = 760
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 75/153 (49%), Positives = 90/153 (58%), Gaps = 43/153 (28%)
Query: 5 SNAPAQLIGNVNGTYLIQQTV---EPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
S QL+ NGTYLIQQ+V +P HA I A A+R SP TE A
Sbjct: 214 STTTGQLLSQGNGTYLIQQSVVDTDPATHALISAAAAARASPQ--TESA----------- 260
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
VQWL++NYETA+GVSLPRS+L+NHY+RHC++NK
Sbjct: 261 ---------------------------VQWLLENYETADGVSLPRSTLYNHYLRHCSDNK 293
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
LD VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 294 LDPVNAASFGKLIRSVFLGLRTRRLGTRGNSKY 326
>gi|75075377|sp|Q4R3I8.1|RFX3_MACFA RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory
factor X 3
gi|67971974|dbj|BAE02329.1| unnamed protein product [Macaca fascicularis]
Length = 749
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 72/148 (48%), Positives = 94/148 (63%), Gaps = 21/148 (14%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T +R SP E+A
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHS---VTHTTRASP-ATIEMA----------I 163
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
T D LS +H + + + +QWL+DNYETAEGVSLPRS+L++HY+RHC E+K
Sbjct: 164 ETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYDHYLRHCQEHK 216
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTR 149
LD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 217 LDPVNAASFGKLIRSIFMGLRTRRLGTR 244
>gi|380807345|gb|AFE75548.1| MHC class II regulatory factor RFX1, partial [Macaca mulatta]
Length = 428
Score = 129 bits (324), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/73 (79%), Positives = 65/73 (89%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRS
Sbjct: 27 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRS 86
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 87 VFMGLRTRRLGTR 99
>gi|444526381|gb|ELV14332.1| MHC class II regulatory factor RFX1 [Tupaia chinensis]
Length = 784
Score = 128 bits (322), Expect = 7e-28, Method: Compositional matrix adjust.
Identities = 56/70 (80%), Positives = 63/70 (90%)
Query: 80 HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFI 139
H T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRSVF+
Sbjct: 339 HTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFM 398
Query: 140 GLRTRRLGTR 149
GLRTRRLGTR
Sbjct: 399 GLRTRRLGTR 408
>gi|6580397|emb|CAB63452.1| RFX transcription factor [Drosophila melanogaster]
Length = 897
Score = 128 bits (322), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 72/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++LS KI+
Sbjct: 309 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALSSSNKIA 368
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY+ HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 369 SATIKWLSRNYETADGVSLPRSTLYNHYMHHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 428
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 429 LGTRGNSKY 437
>gi|340373779|ref|XP_003385417.1| PREDICTED: DNA-binding protein RFX2-like [Amphimedon queenslandica]
Length = 747
Score = 128 bits (321), Expect = 8e-28, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 69/78 (88%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S+S T+ P T++WL+DNYETAEGVSLPRS+L+NHY+RHCA +K+DA+NAASFGKLIRS
Sbjct: 238 SISASTRADPHTIKWLLDNYETAEGVSLPRSTLYNHYLRHCAASKIDAINAASFGKLIRS 297
Query: 137 VFIGLRTRRLGTRRGWRF 154
VFIGL+TRRLGTR ++
Sbjct: 298 VFIGLKTRRLGTRGNSKY 315
>gi|256052839|ref|XP_002569957.1| rfx transcription factor [Schistosoma mansoni]
Length = 1015
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
D+ +S+SH K SP TVQWL+DNYETAEGVSLPRS+L+ HY++HC E+KL+ +N ASFGK
Sbjct: 161 DDGSSISHTAKASPVTVQWLVDNYETAEGVSLPRSTLYFHYLQHCNEHKLEPMNPASFGK 220
Query: 133 LIRSVFIGLRTRRLGTRRGWRF 154
LIRSVF GLRTRRLGTR ++
Sbjct: 221 LIRSVFYGLRTRRLGTRGNSKY 242
>gi|353232952|emb|CCD80307.1| putative rfx transcription factor [Schistosoma mansoni]
Length = 1120
Score = 128 bits (321), Expect = 9e-28, Method: Compositional matrix adjust.
Identities = 56/82 (68%), Positives = 69/82 (84%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
D+ +S+SH K SP TVQWL+DNYETAEGVSLPRS+L+ HY++HC E+KL+ +N ASFGK
Sbjct: 161 DDGSSISHTAKASPVTVQWLVDNYETAEGVSLPRSTLYFHYLQHCNEHKLEPMNPASFGK 220
Query: 133 LIRSVFIGLRTRRLGTRRGWRF 154
LIRSVF GLRTRRLGTR ++
Sbjct: 221 LIRSVFYGLRTRRLGTRGNSKY 242
>gi|194902350|ref|XP_001980678.1| GG17288 [Drosophila erecta]
gi|190652381|gb|EDV49636.1| GG17288 [Drosophila erecta]
Length = 1089
Score = 128 bits (321), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 501 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 560
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 561 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 620
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 621 LGTRGNSKY 629
>gi|195330109|ref|XP_002031750.1| GM26172 [Drosophila sechellia]
gi|194120693|gb|EDW42736.1| GM26172 [Drosophila sechellia]
Length = 1071
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 483 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 542
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 543 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 602
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 603 LGTRGNSKY 611
>gi|347970965|ref|XP_318401.5| AGAP003943-PA [Anopheles gambiae str. PEST]
gi|333469568|gb|EAA13634.5| AGAP003943-PA [Anopheles gambiae str. PEST]
Length = 730
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 59/87 (67%), Positives = 73/87 (83%), Gaps = 2/87 (2%)
Query: 63 TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL 122
T++ G L D+ +++H ++ PATV WL++NYETA+GVSLPRS+L+NHY+ HC ENKL
Sbjct: 139 TASVGQEL--DSAPNMTHAARVLPATVSWLMENYETADGVSLPRSTLYNHYMWHCNENKL 196
Query: 123 DAVNAASFGKLIRSVFIGLRTRRLGTR 149
DAVNAASFGKLIRSVF GLRTRRLGTR
Sbjct: 197 DAVNAASFGKLIRSVFSGLRTRRLGTR 223
>gi|363743677|ref|XP_418212.3| PREDICTED: DNA-binding protein RFX2 isoform 2 [Gallus gallus]
Length = 725
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 70/134 (52%), Positives = 84/134 (62%), Gaps = 21/134 (15%)
Query: 16 NGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQ 75
+G YLI +E T H+ + SR SP A A N N+
Sbjct: 153 SGAYLIHGGMENTRHSL---SHTSRSSP-------------ATLEMAIENLQK-----NE 191
Query: 76 ASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIR 135
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIR
Sbjct: 192 GITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIR 251
Query: 136 SVFIGLRTRRLGTR 149
SVF+GLRTRRLGTR
Sbjct: 252 SVFMGLRTRRLGTR 265
>gi|195499779|ref|XP_002097092.1| GE24689 [Drosophila yakuba]
gi|194183193|gb|EDW96804.1| GE24689 [Drosophila yakuba]
Length = 1085
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 497 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 556
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 557 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 616
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 617 LGTRGNSKY 625
>gi|442618464|ref|NP_001097738.2| Rfx, isoform I [Drosophila melanogaster]
gi|440217304|gb|ABW08636.2| Rfx, isoform I [Drosophila melanogaster]
Length = 889
Score = 127 bits (320), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 301 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 360
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 361 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 420
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 421 LGTRGNSKY 429
>gi|195388732|ref|XP_002053033.1| GJ23659 [Drosophila virilis]
gi|194151119|gb|EDW66553.1| GJ23659 [Drosophila virilis]
Length = 880
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/131 (52%), Positives = 89/131 (67%), Gaps = 15/131 (11%)
Query: 39 SRDSPHENT-EVAYIVDEPAQATT-------------ATSNTGDPLSPD-NQASLSHVTK 83
SRDSPH T EV+YI + + T + N D SPD +Q++++ K
Sbjct: 287 SRDSPHSLTHEVSYIQEAQSTPQTPTSTTTTNSASGGSIGNGVDGASPDSDQSAMATSNK 346
Query: 84 ISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRT 143
I+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAASFGKLIRSVF GLRT
Sbjct: 347 IASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAASFGKLIRSVFSGLRT 406
Query: 144 RRLGTRRGWRF 154
RRLGTR ++
Sbjct: 407 RRLGTRGNSKY 417
>gi|312375061|gb|EFR22501.1| hypothetical protein AND_15118 [Anopheles darlingi]
Length = 837
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 65/112 (58%), Positives = 83/112 (74%), Gaps = 6/112 (5%)
Query: 39 SRDSPHENTEVA-YIVDEPAQATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYE 97
S SP T+VA Y+ + A A ++ +P+N L+H ++ PAT+ WL++NYE
Sbjct: 180 SDSSPQNMTDVASYLHAQHASAALGQADLDH--TPNN---LAHAVRVLPATMNWLVENYE 234
Query: 98 TAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
TA+GVSLPRS+L+NHY+ HC ENKLDAVNAASFGKLIR+VF GLRTRRLGTR
Sbjct: 235 TADGVSLPRSTLYNHYMWHCNENKLDAVNAASFGKLIRNVFSGLRTRRLGTR 286
>gi|24645678|ref|NP_649999.2| Rfx, isoform J [Drosophila melanogaster]
gi|10726428|gb|AAF54526.2| Rfx, isoform J [Drosophila melanogaster]
Length = 897
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 309 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 368
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 369 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 428
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 429 LGTRGNSKY 437
>gi|260832349|ref|XP_002611120.1| hypothetical protein BRAFLDRAFT_205992 [Branchiostoma floridae]
gi|229296490|gb|EEN67130.1| hypothetical protein BRAFLDRAFT_205992 [Branchiostoma floridae]
Length = 434
Score = 127 bits (319), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 55/72 (76%), Positives = 67/72 (93%)
Query: 78 LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSV 137
+++ T+ SP T+QWL++NYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRSV
Sbjct: 6 VTYPTRASPITIQWLLENYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSV 65
Query: 138 FIGLRTRRLGTR 149
F+GLRTRRLGTR
Sbjct: 66 FLGLRTRRLGTR 77
>gi|442618460|ref|NP_001247022.2| Rfx, isoform G [Drosophila melanogaster]
gi|440217302|gb|AFH06340.2| Rfx, isoform G [Drosophila melanogaster]
Length = 860
Score = 127 bits (319), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 71/129 (55%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 272 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 331
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRSVF GLRTRR
Sbjct: 332 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSVFSGLRTRR 391
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 392 LGTRGNSKY 400
>gi|334326549|ref|XP_001376399.2| PREDICTED: DNA-binding protein RFX2-like [Monodelphis domestica]
Length = 697
Score = 126 bits (317), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%)
Query: 74 NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
N+ SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKL
Sbjct: 161 NEGITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKL 220
Query: 134 IRSVFIGLRTRRLGTRRGWRF 154
IRSVF+GLRTRRLGTR ++
Sbjct: 221 IRSVFVGLRTRRLGTRGNSKY 241
>gi|395512923|ref|XP_003760682.1| PREDICTED: DNA-binding protein RFX2 [Sarcophilus harrisii]
Length = 697
Score = 126 bits (317), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/81 (69%), Positives = 68/81 (83%)
Query: 74 NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
N+ SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKL
Sbjct: 161 NEGITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKL 220
Query: 134 IRSVFIGLRTRRLGTRRGWRF 154
IRSVF+GLRTRRLGTR ++
Sbjct: 221 IRSVFVGLRTRRLGTRGNSKY 241
>gi|449491804|ref|XP_002192213.2| PREDICTED: DNA-binding protein RFX2 [Taeniopygia guttata]
Length = 712
Score = 126 bits (316), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 66/76 (86%)
Query: 74 NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
N+ SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKL
Sbjct: 192 NEGITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKL 251
Query: 134 IRSVFIGLRTRRLGTR 149
IRSVF+GLRTRRLGTR
Sbjct: 252 IRSVFMGLRTRRLGTR 267
>gi|443697380|gb|ELT97878.1| hypothetical protein CAPTEDRAFT_168129 [Capitella teleta]
Length = 622
Score = 126 bits (316), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 71/152 (46%), Positives = 88/152 (57%), Gaps = 27/152 (17%)
Query: 1 MVQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQAT 60
M Q+S P Q++ + GTYL+Q E + TT + PA
Sbjct: 22 MTQLSGIPGQILTHQGGTYLVQGGAMDGEGHPLTHTTRA---------------SPATVI 66
Query: 61 TATSNTGDPLS---PDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHC 117
A + S P+ + SLS VQWLIDNYETAEGVSLPRS+L+NHY+RHC
Sbjct: 67 AALQHDRKGFSFFNPEFRNSLS---------VQWLIDNYETAEGVSLPRSTLYNHYLRHC 117
Query: 118 AENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+ K+D +N ASFGKLIRSVF+GLRTRRLGTR
Sbjct: 118 QDQKIDPMNPASFGKLIRSVFLGLRTRRLGTR 149
>gi|345327773|ref|XP_001513118.2| PREDICTED: DNA-binding protein RFX2-like [Ornithorhynchus anatinus]
Length = 868
Score = 125 bits (315), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 66/76 (86%)
Query: 74 NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
N+ SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKL
Sbjct: 310 NEGITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKL 369
Query: 134 IRSVFIGLRTRRLGTR 149
IRSVF+GLRTRRLGTR
Sbjct: 370 IRSVFMGLRTRRLGTR 385
>gi|432102005|gb|ELK29825.1| DNA-binding protein RFX2 [Myotis davidii]
Length = 817
Score = 125 bits (313), Expect = 7e-27, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 384 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 443
Query: 139 IGLRTRRLGTRRGWRF 154
+GLRTRRLGTR ++
Sbjct: 444 MGLRTRRLGTRGNSKY 459
>gi|348515151|ref|XP_003445103.1| PREDICTED: DNA-binding protein RFX2-like [Oreochromis niloticus]
Length = 736
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 63/71 (88%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E KLD VNAASFGKLIRSVF
Sbjct: 200 SHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQKLDPVNAASFGKLIRSVF 259
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 260 MGLRTRRLGTR 270
>gi|148222802|ref|NP_001090132.1| DNA-binding protein RFX2 [Xenopus laevis]
gi|123916375|sp|Q32NR3.1|RFX2_XENLA RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|80479255|gb|AAI08518.1| MGC130921 protein [Xenopus laevis]
Length = 694
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 74 NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
N+ SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KLD VNAASFGKL
Sbjct: 160 NEGITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLDPVNAASFGKL 219
Query: 134 IRSVFIGLRTRRLGTR 149
IRSVF+GLRTRRLGTR
Sbjct: 220 IRSVFMGLRTRRLGTR 235
>gi|355703032|gb|EHH29523.1| hypothetical protein EGK_09978 [Macaca mulatta]
Length = 726
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 193 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 252
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 253 MGLRTRRLGTR 263
>gi|395850947|ref|XP_003798033.1| PREDICTED: DNA-binding protein RFX2 [Otolemur garnettii]
Length = 723
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTRRGWRF 154
+GLRTRRLGTR ++
Sbjct: 250 MGLRTRRLGTRGNSKY 265
>gi|183986731|ref|NP_001116955.1| DNA-binding protein RFX2 [Xenopus (Silurana) tropicalis]
gi|254797632|sp|B1WAV2.1|RFX2_XENTR RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|171846772|gb|AAI61512.1| rfx2 protein [Xenopus (Silurana) tropicalis]
Length = 694
Score = 125 bits (313), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 74 NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
N+ SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KLD VNAASFGKL
Sbjct: 160 NEGITSHKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLDPVNAASFGKL 219
Query: 134 IRSVFIGLRTRRLGTR 149
IRSVF+GLRTRRLGTR
Sbjct: 220 IRSVFMGLRTRRLGTR 235
>gi|358337343|dbj|GAA55712.1| regulatory factor X 1/2/3 [Clonorchis sinensis]
Length = 985
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 54/82 (65%), Positives = 69/82 (84%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
++ +S+SH K SP TVQWL++NYETAEGVSLPRS+L+ HY++HC E+KL+ +N ASFGK
Sbjct: 134 EDPSSISHTAKASPLTVQWLVENYETAEGVSLPRSTLYFHYLQHCNEHKLEPMNPASFGK 193
Query: 133 LIRSVFIGLRTRRLGTRRGWRF 154
LIRSVF GLRTRRLGTR ++
Sbjct: 194 LIRSVFFGLRTRRLGTRGNSKY 215
>gi|402903899|ref|XP_003914792.1| PREDICTED: DNA-binding protein RFX2 isoform 2 [Papio anubis]
Length = 723
Score = 124 bits (312), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|452390|emb|CAA53705.1| DNA binding protein RFX2 [Homo sapiens]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|441628622|ref|XP_003281614.2| PREDICTED: DNA-binding protein RFX2 isoform 1 [Nomascus leucogenys]
Length = 727
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|19743881|ref|NP_000626.2| DNA-binding protein RFX2 isoform a [Homo sapiens]
gi|254763325|sp|P48378.2|RFX2_HUMAN RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|119589518|gb|EAW69112.1| regulatory factor X, 2 (influences HLA class II expression),
isoform CRA_a [Homo sapiens]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|20306878|gb|AAH28579.1| Regulatory factor X, 2 (influences HLA class II expression) [Homo
sapiens]
gi|123997273|gb|ABM86238.1| regulatory factor X, 2 (influences HLA class II expression)
[synthetic construct]
gi|157928823|gb|ABW03697.1| regulatory factor X, 2 (influences HLA class II expression)
[synthetic construct]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|345786691|ref|XP_003432842.1| PREDICTED: DNA-binding protein RFX2 [Canis lupus familiaris]
Length = 727
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 195 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 254
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 255 MGLRTRRLGTR 265
>gi|410297198|gb|JAA27199.1| regulatory factor X, 2 (influences HLA class II expression) [Pan
troglodytes]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|149716391|ref|XP_001495231.1| PREDICTED: DNA-binding protein RFX2 isoform 1 [Equus caballus]
Length = 727
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 195 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 254
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 255 MGLRTRRLGTR 265
>gi|75075531|sp|Q4R3Z4.1|RFX2_MACFA RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|67971660|dbj|BAE02172.1| unnamed protein product [Macaca fascicularis]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|397497139|ref|XP_003819373.1| PREDICTED: DNA-binding protein RFX2 isoform 1 [Pan paniscus]
gi|397497141|ref|XP_003819374.1| PREDICTED: DNA-binding protein RFX2 isoform 2 [Pan paniscus]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|440901083|gb|ELR52082.1| DNA-binding protein RFX2 [Bos grunniens mutus]
Length = 721
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 195 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 254
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 255 MGLRTRRLGTR 265
>gi|195572001|ref|XP_002103988.1| GD20723 [Drosophila simulans]
gi|194199915|gb|EDX13491.1| GD20723 [Drosophila simulans]
Length = 4013
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 70/129 (54%), Positives = 89/129 (68%), Gaps = 14/129 (10%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGD-------------PLSPD-NQASLSHVTKIS 85
RDSPH TEVAYI + + T TS T SPD +Q++L KI+
Sbjct: 313 RDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGASPDSDQSALGSSNKIA 372
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASFGKLIRS+F GLRTRR
Sbjct: 373 SATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASFGKLIRSLFSGLRTRR 432
Query: 146 LGTRRGWRF 154
LGTR ++
Sbjct: 433 LGTRGKSKY 441
>gi|197097300|ref|NP_001125003.1| DNA-binding protein RFX2 [Pongo abelii]
gi|75042371|sp|Q5RDR2.1|RFX2_PONAB RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|55726664|emb|CAH90095.1| hypothetical protein [Pongo abelii]
Length = 704
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|390478443|ref|XP_002761705.2| PREDICTED: DNA-binding protein RFX2 [Callithrix jacchus]
Length = 754
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 287 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 346
Query: 139 IGLRTRRLGTRRGWRF 154
+GLRTRRLGTR ++
Sbjct: 347 MGLRTRRLGTRGNSKY 362
>gi|156120991|ref|NP_001095642.1| DNA-binding protein RFX2 [Bos taurus]
gi|254797630|sp|A6QLW9.1|RFX2_BOVIN RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|151553784|gb|AAI48114.1| RFX2 protein [Bos taurus]
gi|296485753|tpg|DAA27868.1| TPA: regulatory factor X2 [Bos taurus]
Length = 707
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 195 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 254
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 255 MGLRTRRLGTR 265
>gi|431922355|gb|ELK19446.1| DNA-binding protein RFX2 [Pteropus alecto]
Length = 741
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 145 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 204
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 205 MGLRTRRLGTR 215
>gi|426229093|ref|XP_004008627.1| PREDICTED: DNA-binding protein RFX2 isoform 1 [Ovis aries]
Length = 723
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 196 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 255
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 256 MGLRTRRLGTR 266
>gi|297275891|ref|XP_001086864.2| PREDICTED: DNA-binding protein RFX2 isoform 3 [Macaca mulatta]
Length = 625
Score = 124 bits (312), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 92 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 151
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 152 MGLRTRRLGTR 162
>gi|281347533|gb|EFB23117.1| hypothetical protein PANDA_021003 [Ailuropoda melanoleuca]
Length = 662
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 131 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 190
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 191 MGLRTRRLGTR 201
>gi|410950231|ref|XP_003981814.1| PREDICTED: DNA-binding protein RFX2 [Felis catus]
Length = 630
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/76 (72%), Positives = 66/76 (86%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 195 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 254
Query: 139 IGLRTRRLGTRRGWRF 154
+GLRTRRLGTR ++
Sbjct: 255 MGLRTRRLGTRGNSKY 270
>gi|301791066|ref|XP_002930530.1| PREDICTED: DNA-binding protein RFX2-like [Ailuropoda melanoleuca]
Length = 665
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 134 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 193
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 194 MGLRTRRLGTR 204
>gi|332851943|ref|XP_512310.3| PREDICTED: DNA-binding protein RFX2 isoform 2 [Pan troglodytes]
Length = 547
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 14 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 73
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 74 MGLRTRRLGTR 84
>gi|390177424|ref|XP_003736372.1| GA19507, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859038|gb|EIM52445.1| GA19507, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 884
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 95/146 (65%), Gaps = 18/146 (12%)
Query: 27 PTEHATII---ATTASRDSPHENT-EVAYIVDEPAQATTATSNTGD-------------P 69
P E ++ + + SRDSPH T EVAYI + + T TS T
Sbjct: 284 PVEEGLLLNGSSQSHSRDSPHSLTHEVAYIQEAQSTPQTPTSTTTTNSASGGSLGTGGGG 343
Query: 70 LSPD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
SPD +Q++L + KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAA
Sbjct: 344 ASPDSDQSALGNSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAA 403
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRF 154
SFGKLIRSVF GLRTRRLGTR ++
Sbjct: 404 SFGKLIRSVFSGLRTRRLGTRGNSKY 429
>gi|90081822|dbj|BAE90192.1| unnamed protein product [Macaca fascicularis]
Length = 474
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 92 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 151
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 152 MGLRTRRLGTR 162
>gi|426386831|ref|XP_004059884.1| PREDICTED: DNA-binding protein RFX2 [Gorilla gorilla gorilla]
Length = 928
Score = 124 bits (311), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 55/71 (77%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 370 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 429
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 430 MGLRTRRLGTR 440
>gi|47223610|emb|CAF99219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 821
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 57/82 (69%), Positives = 70/82 (85%), Gaps = 3/82 (3%)
Query: 68 DPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNA 127
DP + N+++ T++SP +QWL+DNYETAEGVSLPRS+L+NHY+RHC E KLD VNA
Sbjct: 133 DPCA--NRSAEGLKTRVSP-QLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNA 189
Query: 128 ASFGKLIRSVFIGLRTRRLGTR 149
ASFGKLIRS+F+GLRTRRLGTR
Sbjct: 190 ASFGKLIRSIFMGLRTRRLGTR 211
>gi|61651714|ref|NP_001013296.1| DNA-binding protein RFX2 [Danio rerio]
gi|82178869|sp|Q5EAP5.1|RFX2_DANRE RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|59861814|gb|AAH90314.1| Regulatory factor X, 2 (influences HLA class II expression) [Danio
rerio]
Length = 734
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 63/71 (88%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
+H + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E KLD VNAASFGKLIRSVF
Sbjct: 195 THKSSLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEQKLDPVNAASFGKLIRSVF 254
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 255 MGLRTRRLGTR 265
>gi|390177426|ref|XP_003736373.1| GA19507, isoform C [Drosophila pseudoobscura pseudoobscura]
gi|388859039|gb|EIM52446.1| GA19507, isoform C [Drosophila pseudoobscura pseudoobscura]
Length = 1227
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 95/146 (65%), Gaps = 18/146 (12%)
Query: 27 PTEHATII---ATTASRDSPHENT-EVAYIVDEPAQATTATSNTGD-------------P 69
P E ++ + + SRDSPH T EVAYI + + T TS T
Sbjct: 627 PVEEGLLLNGSSQSHSRDSPHSLTHEVAYIQEAQSTPQTPTSTTTTNSASGGSLGTGGGG 686
Query: 70 LSPD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
SPD +Q++L + KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAA
Sbjct: 687 ASPDSDQSALGNSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAA 746
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRF 154
SFGKLIRSVF GLRTRRLGTR ++
Sbjct: 747 SFGKLIRSVFSGLRTRRLGTRGNSKY 772
>gi|198450965|ref|XP_001358196.2| GA19507, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198131273|gb|EAL27333.2| GA19507, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 1241
Score = 124 bits (310), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 95/146 (65%), Gaps = 18/146 (12%)
Query: 27 PTEHATII---ATTASRDSPHENT-EVAYIVDEPAQATTATSNTGD-------------P 69
P E ++ + + SRDSPH T EVAYI + + T TS T
Sbjct: 641 PVEEGLLLNGSSQSHSRDSPHSLTHEVAYIQEAQSTPQTPTSTTTTNSASGGSLGTGGGG 700
Query: 70 LSPD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
SPD +Q++L + KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAA
Sbjct: 701 ASPDSDQSALGNSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAA 760
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRF 154
SFGKLIRSVF GLRTRRLGTR ++
Sbjct: 761 SFGKLIRSVFSGLRTRRLGTRGNSKY 786
>gi|432855063|ref|XP_004068054.1| PREDICTED: DNA-binding protein RFX2-like [Oryzias latipes]
Length = 708
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPR SL+NHY+RHC E KLD VNAASFGKLIRSVF
Sbjct: 200 SHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLRHCQEQKLDPVNAASFGKLIRSVF 259
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 260 MGLRTRRLGTR 270
>gi|432869936|ref|XP_004071756.1| PREDICTED: MHC class II regulatory factor RFX1-like [Oryzias
latipes]
Length = 818
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 58/92 (63%), Positives = 67/92 (72%), Gaps = 11/92 (11%)
Query: 74 NQASLSHVTKISPAT-----------VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL 122
N S SH + SPAT VQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL
Sbjct: 331 NSQSFSHTARASPATLFSLFHLAACQVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKL 390
Query: 123 DAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+ VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 391 EPVNAASFGKLIRSVFMGLRTRRLGTRGNSKY 422
>gi|348550690|ref|XP_003461164.1| PREDICTED: DNA-binding protein RFX2-like [Cavia porcellus]
Length = 721
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 54/70 (77%), Positives = 63/70 (90%)
Query: 80 HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFI 139
H + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF+
Sbjct: 191 HKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVFM 250
Query: 140 GLRTRRLGTR 149
GLRTRRLGTR
Sbjct: 251 GLRTRRLGTR 260
>gi|410929475|ref|XP_003978125.1| PREDICTED: DNA-binding protein RFX2-like [Takifugu rubripes]
Length = 736
Score = 123 bits (309), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 62/71 (87%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPR SL+NHY+RHC E KLD VNAASFGKLIRSVF
Sbjct: 200 SHKSSLLNSHLQWLLDNYETAEGVSLPRCSLYNHYLRHCQEQKLDPVNAASFGKLIRSVF 259
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 260 MGLRTRRLGTR 270
>gi|452422|emb|CAA53704.1| DNA binding protein RFX3 [Mus musculus]
Length = 189
Score = 123 bits (308), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 58/103 (56%), Positives = 71/103 (68%), Gaps = 25/103 (24%)
Query: 77 SLSHVTKISPATV-------------------------QWLIDNYETAEGVSLPRSSLFN 111
S++H T+ SPAT+ QWL+DNYETAEGVSLPRS+L+N
Sbjct: 11 SVTHTTRASPATIEMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYN 70
Query: 112 HYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
HY+RHC E+KLD VNAASFGKLIRS+F+GLRTRRLGTR ++
Sbjct: 71 HYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTRGNSKY 113
>gi|195443606|ref|XP_002069491.1| GK11555 [Drosophila willistoni]
gi|194165576|gb|EDW80477.1| GK11555 [Drosophila willistoni]
Length = 1147
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 74/146 (50%), Positives = 94/146 (64%), Gaps = 18/146 (12%)
Query: 27 PTEHATII---ATTASRDSPHENT-EVAYIVDEPAQATTATSNTGD-------------P 69
P E ++ + + SRDSPH T EVAYI + + T TS T
Sbjct: 533 PVEEGLLLNGSSQSHSRDSPHSLTHEVAYIQEAQSTPQTPTSTTTTNSASGGSLGTGGGG 592
Query: 70 LSPDN-QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
SPD+ Q++L KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC E KL+ VNAA
Sbjct: 593 ASPDSEQSALGSSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCNEQKLEPVNAA 652
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRF 154
SFGKLIRSVF GLRTRRLGTR ++
Sbjct: 653 SFGKLIRSVFSGLRTRRLGTRGNSKY 678
>gi|391332605|ref|XP_003740723.1| PREDICTED: transcription factor RFX3-like [Metaseiulus
occidentalis]
Length = 670
Score = 122 bits (307), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 59/61 (96%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
V+WLIDNYETAEGVSLPRS+L+NHY+RHC+EN LD VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 186 VRWLIDNYETAEGVSLPRSTLYNHYLRHCSENNLDPVNAASFGKLIRSVFLGLRTRRLGT 245
Query: 149 R 149
R
Sbjct: 246 R 246
>gi|74205536|dbj|BAE21069.1| unnamed protein product [Mus musculus]
Length = 614
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/69 (75%), Positives = 63/69 (91%)
Query: 81 VTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIG 140
V +++ +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRS+F+G
Sbjct: 18 VPRLAVTLLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIFMG 77
Query: 141 LRTRRLGTR 149
LRTRRLGTR
Sbjct: 78 LRTRRLGTR 86
>gi|109944606|emb|CAI72671.1| regulatory factor X 3 [Oryctolagus cuniculus]
Length = 277
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 58/98 (59%), Positives = 69/98 (70%), Gaps = 25/98 (25%)
Query: 77 SLSHVTKISPATV-------------------------QWLIDNYETAEGVSLPRSSLFN 111
S++H T+ SPAT+ QWL+DNYETAEGVSLPRS+L+N
Sbjct: 2 SVTHTTRASPATIEMAIETLQKSDGLSTHRSSLLNSHLQWLLDNYETAEGVSLPRSTLYN 61
Query: 112 HYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
HY+RHC E+KLD VNAASFGKLIRS+F+GLRTRRLGTR
Sbjct: 62 HYLRHCQEHKLDPVNAASFGKLIRSIFMGLRTRRLGTR 99
>gi|292610026|ref|XP_682728.3| PREDICTED: MHC class II regulatory factor RFX1 [Danio rerio]
Length = 822
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 55/78 (70%), Positives = 65/78 (83%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S S T+ SPATVQWL+DNYETAEGVSLPR +L+ HY+ HC + KL+ VNAASFGKLIRS
Sbjct: 273 SFSPNTRASPATVQWLMDNYETAEGVSLPRCTLYCHYLLHCQQTKLEPVNAASFGKLIRS 332
Query: 137 VFIGLRTRRLGTRRGWRF 154
VF+GLRTRRLGTR ++
Sbjct: 333 VFMGLRTRRLGTRGNSKY 350
>gi|194740942|ref|XP_001952948.1| GF17463 [Drosophila ananassae]
gi|190626007|gb|EDV41531.1| GF17463 [Drosophila ananassae]
Length = 1066
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 68/133 (51%), Positives = 85/133 (63%), Gaps = 15/133 (11%)
Query: 37 TASRDSPHENTEVAYIVDEPAQATTATSNTGDPL---------------SPDNQASLSHV 81
T DSPH TEVAYI + + T TS T + Q++L
Sbjct: 479 TGRGDSPHSLTEVAYIQEAQSTPQTPTSTTTTHSASGGSLGTGGGGNSPADSEQSALGSS 538
Query: 82 TKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGL 141
KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC+E KL+ VNAASFGKLIRSVF GL
Sbjct: 539 NKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEQKLEPVNAASFGKLIRSVFSGL 598
Query: 142 RTRRLGTRRGWRF 154
RTRRLGTR ++
Sbjct: 599 RTRRLGTRGNSKY 611
>gi|350579269|ref|XP_003480572.1| PREDICTED: transcription factor RFX3-like [Sus scrofa]
Length = 589
Score = 122 bits (306), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
+H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRS+F
Sbjct: 14 THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIF 73
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 74 MGLRTRRLGTR 84
>gi|449277498|gb|EMC85643.1| Transcription factor RFX3, partial [Columba livia]
Length = 602
Score = 122 bits (305), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 52/71 (73%), Positives = 64/71 (90%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
+H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E+KLD VNAASFGKLIRS+F
Sbjct: 17 THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQEHKLDPVNAASFGKLIRSIF 76
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 77 MGLRTRRLGTR 87
>gi|410904141|ref|XP_003965551.1| PREDICTED: transcription factor RFX3-like [Takifugu rubripes]
Length = 757
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 60/66 (90%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DNYETAEGVSLPRS+L+NHY+RHC E KLD VNAASFGKLIRS+F+GLRTRRLGT
Sbjct: 178 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGT 237
Query: 149 RRGWRF 154
R ++
Sbjct: 238 RGNSKY 243
>gi|121583926|ref|NP_001073517.1| transcription factor RFX3 [Danio rerio]
gi|292630872|sp|A0JMF8.1|RFX3_DANRE RecName: Full=Transcription factor RFX3; AltName: Full=Regulatory
factor X 3
gi|116487576|gb|AAI25863.1| Regulatory factor X, 3 (influences HLA class II expression) [Danio
rerio]
gi|182890880|gb|AAI65663.1| Rfx3 protein [Danio rerio]
Length = 765
Score = 121 bits (304), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 60/66 (90%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DNYETAEGVSLPRS+L+NHY+RHC E KLD VNAASFGKLIRS+F+GLRTRRLGT
Sbjct: 190 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGT 249
Query: 149 RRGWRF 154
R ++
Sbjct: 250 RGNSKY 255
>gi|241647636|ref|XP_002411177.1| rfx transcription factor, putative [Ixodes scapularis]
gi|215503807|gb|EEC13301.1| rfx transcription factor, putative [Ixodes scapularis]
Length = 487
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 53/61 (86%), Positives = 59/61 (96%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
VQWLIDNYETAEGVSLPRS+L+NHY+RHC E+KL+ VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 1 VQWLIDNYETAEGVSLPRSTLYNHYLRHCGEHKLEPVNAASFGKLIRSVFLGLRTRRLGT 60
Query: 149 R 149
R
Sbjct: 61 R 61
>gi|432885932|ref|XP_004074822.1| PREDICTED: transcription factor RFX3-like [Oryzias latipes]
Length = 754
Score = 121 bits (304), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 60/66 (90%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DNYETAEGVSLPRS+L+NHY+RHC E KLD VNAASFGKLIRS+F+GLRTRRLGT
Sbjct: 175 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGT 234
Query: 149 RRGWRF 154
R ++
Sbjct: 235 RGNSKY 240
>gi|348532831|ref|XP_003453909.1| PREDICTED: transcription factor RFX3-like [Oreochromis niloticus]
Length = 759
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 51/66 (77%), Positives = 60/66 (90%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DNYETAEGVSLPRS+L+NHY+RHC E KLD VNAASFGKLIRS+F+GLRTRRLGT
Sbjct: 178 LQWLLDNYETAEGVSLPRSTLYNHYLRHCQEQKLDPVNAASFGKLIRSIFMGLRTRRLGT 237
Query: 149 RRGWRF 154
R ++
Sbjct: 238 RGNSKY 243
>gi|226958468|ref|NP_082063.1| DNA-binding protein RFX2 isoform 1 [Mus musculus]
gi|254763326|sp|P48379.2|RFX2_MOUSE RecName: Full=DNA-binding protein RFX2; AltName: Full=Regulatory
factor X 2
gi|26336468|dbj|BAC31919.1| unnamed protein product [Mus musculus]
Length = 717
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 59/61 (96%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KL+ VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 195 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLEPVNAASFGKLIRSVFMGLRTRRLGT 254
Query: 149 R 149
R
Sbjct: 255 R 255
>gi|345645049|gb|AEO12885.1| MIP29292p [Drosophila melanogaster]
Length = 717
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 72 PD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF 130
PD +Q++L KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASF
Sbjct: 368 PDSDQSALGSSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASF 427
Query: 131 GKLIRSVFIGLRTRRLGTRRGWRF 154
GKLIRSVF GLRTRRLGTR ++
Sbjct: 428 GKLIRSVFSGLRTRRLGTRGNSKY 451
>gi|148234647|ref|NP_001083022.1| MHC class II regulatory factor RFX1 [Danio rerio]
gi|141795697|gb|AAI39665.1| Zgc:162914 protein [Danio rerio]
Length = 897
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 56/76 (73%), Positives = 63/76 (82%), Gaps = 6/76 (7%)
Query: 80 HVTKISPAT------VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
H T+ SPAT VQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKL
Sbjct: 339 HPTRASPATLSSGPQVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKL 398
Query: 134 IRSVFIGLRTRRLGTR 149
IRSVF+GLRTRRLGTR
Sbjct: 399 IRSVFMGLRTRRLGTR 414
>gi|386765471|ref|NP_001247021.1| Rfx, isoform C [Drosophila melanogaster]
gi|383292612|gb|AFH06339.1| Rfx, isoform C [Drosophila melanogaster]
Length = 911
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 72 PD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF 130
PD +Q++L KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASF
Sbjct: 368 PDSDQSALGSSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASF 427
Query: 131 GKLIRSVFIGLRTRRLGTRRGWRF 154
GKLIRSVF GLRTRRLGTR ++
Sbjct: 428 GKLIRSVFSGLRTRRLGTRGNSKY 451
>gi|442618462|ref|NP_001247023.2| Rfx, isoform H [Drosophila melanogaster]
gi|440217303|gb|AFH06341.2| Rfx, isoform H [Drosophila melanogaster]
Length = 919
Score = 120 bits (302), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 55/84 (65%), Positives = 71/84 (84%), Gaps = 1/84 (1%)
Query: 72 PD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF 130
PD +Q++L KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASF
Sbjct: 376 PDSDQSALGSSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASF 435
Query: 131 GKLIRSVFIGLRTRRLGTRRGWRF 154
GKLIRSVF GLRTRRLGTR ++
Sbjct: 436 GKLIRSVFSGLRTRRLGTRGNSKY 459
>gi|118343966|ref|NP_001071807.1| regulatory factor X [Ciona intestinalis]
gi|70571057|dbj|BAE06671.1| regulatory factor X [Ciona intestinalis]
Length = 803
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/77 (64%), Positives = 64/77 (83%)
Query: 78 LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSV 137
+ H T+ SPATV WL+D++E +EGVSLPR+ ++NHY+ HC E +LD VNAASFGKL+RSV
Sbjct: 234 IGHTTRASPATVHWLMDHFENSEGVSLPRALMYNHYLLHCQEQQLDPVNAASFGKLVRSV 293
Query: 138 FIGLRTRRLGTRRGWRF 154
FIGLRTRRLGTR ++
Sbjct: 294 FIGLRTRRLGTRGNSKY 310
>gi|47940067|gb|AAH71571.1| RFX2 protein [Homo sapiens]
Length = 723
Score = 120 bits (302), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 54/71 (76%), Positives = 63/71 (88%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSL RSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 190 SHKSGLLNSHLQWLLDNYETAEGVSLHRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 249
Query: 139 IGLRTRRLGTR 149
+GLRTRRLGTR
Sbjct: 250 MGLRTRRLGTR 260
>gi|148706258|gb|EDL38205.1| regulatory factor X, 2 (influences HLA class II expression),
isoform CRA_a [Mus musculus]
Length = 139
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 52/61 (85%), Positives = 59/61 (96%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KL+ VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 38 LQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLEPVNAASFGKLIRSVFMGLRTRRLGT 97
Query: 149 R 149
R
Sbjct: 98 R 98
>gi|348530730|ref|XP_003452863.1| PREDICTED: MHC class II regulatory factor RFX1-like [Oreochromis
niloticus]
Length = 906
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 67/94 (71%), Gaps = 13/94 (13%)
Query: 74 NQASLSHVTKISPATV-------------QWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
N + SH + SPATV QWL+DNYETAEGVSLPRS+L+ HY+ HC E
Sbjct: 336 NSQNYSHTARASPATVSITEGEESSVPSVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQ 395
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
KL+ VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 396 KLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKY 429
>gi|442618458|ref|NP_001262464.1| Rfx, isoform F [Drosophila melanogaster]
gi|440217301|gb|AGB95846.1| Rfx, isoform F [Drosophila melanogaster]
Length = 882
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 69/79 (87%), Gaps = 1/79 (1%)
Query: 72 PD-NQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF 130
PD +Q++L KI+ AT++WL NYETA+GVSLPRS+L+NHY++HC+E+KL+ VNAASF
Sbjct: 339 PDSDQSALGSSNKIASATIKWLSRNYETADGVSLPRSTLYNHYMQHCSEHKLEPVNAASF 398
Query: 131 GKLIRSVFIGLRTRRLGTR 149
GKLIRSVF GLRTRRLGTR
Sbjct: 399 GKLIRSVFSGLRTRRLGTR 417
>gi|354479218|ref|XP_003501810.1| PREDICTED: DNA-binding protein RFX2 isoform 1 [Cricetulus griseus]
Length = 717
Score = 120 bits (300), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 86/133 (64%), Gaps = 21/133 (15%)
Query: 17 GTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQA 76
G YLI ++ T H+ +A TA R SP E+A T + L+P
Sbjct: 144 GAYLIHGGMDSTRHS--LAHTA-RSSP-ATLEMA----------IETLQKSEGLAP---- 185
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
H + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KL+ VNAASFGKLIRS
Sbjct: 186 ---HKGGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLEPVNAASFGKLIRS 242
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 243 VFMGLRTRRLGTR 255
>gi|354479224|ref|XP_003501813.1| PREDICTED: DNA-binding protein RFX2 isoform 4 [Cricetulus griseus]
Length = 720
Score = 120 bits (300), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 69/133 (51%), Positives = 86/133 (64%), Gaps = 21/133 (15%)
Query: 17 GTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQA 76
G YLI ++ T H+ +A TA R SP E+A T + L+P
Sbjct: 147 GAYLIHGGMDSTRHS--LAHTA-RSSP-ATLEMA----------IETLQKSEGLAP---- 188
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
H + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC ++KL+ VNAASFGKLIRS
Sbjct: 189 ---HKGGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQDHKLEPVNAASFGKLIRS 245
Query: 137 VFIGLRTRRLGTR 149
VF+GLRTRRLGTR
Sbjct: 246 VFMGLRTRRLGTR 258
>gi|410902342|ref|XP_003964653.1| PREDICTED: MHC class II regulatory factor RFX1-like [Takifugu
rubripes]
Length = 903
Score = 119 bits (299), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 57/94 (60%), Positives = 67/94 (71%), Gaps = 13/94 (13%)
Query: 74 NQASLSHVTKISPATV-------------QWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
N + SH + SPATV QWL+DNYETAEGVSLPRS+L+ HY+ HC E
Sbjct: 333 NTQNYSHTARASPATVSITEGEESSVPSVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQ 392
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
KL+ VNAASFGKLIRSVF+GLRTRRLGTR ++
Sbjct: 393 KLEPVNAASFGKLIRSVFMGLRTRRLGTRGNSKY 426
>gi|47212749|emb|CAF90595.1| unnamed protein product [Tetraodon nigroviridis]
Length = 772
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/105 (57%), Positives = 73/105 (69%), Gaps = 19/105 (18%)
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATV-----------------QWLIDNYETAEGVSL 104
++SN+G + +N + SH + SPATV QWL+DNYETAEGVSL
Sbjct: 195 SSSNSGG--AANNNQNYSHTARASPATVSITEGEESSVPSADKKVQWLLDNYETAEGVSL 252
Query: 105 PRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
PRS+L+ HY+ HC E KL+ VNAASFGKLIRSVF+GLRTRRLGTR
Sbjct: 253 PRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGTR 297
>gi|426230478|ref|XP_004023697.1| PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor
RFX1-like [Ovis aries]
Length = 908
Score = 118 bits (295), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 54/78 (69%), Positives = 63/78 (80%), Gaps = 2/78 (2%)
Query: 77 SLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRS 136
S SH T+ SPATVQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIR
Sbjct: 396 SYSHTTRASPATVQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRX 455
Query: 137 VFIGLRTRRLGTRRGWRF 154
+GLR RRLGTR ++
Sbjct: 456 --MGLRPRRLGTRGNSKY 471
>gi|339248699|ref|XP_003373337.1| putative transcription factor RFX3 [Trichinella spiralis]
gi|316970569|gb|EFV54486.1| putative transcription factor RFX3 [Trichinella spiralis]
Length = 801
Score = 118 bits (295), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 61/128 (47%), Positives = 78/128 (60%), Gaps = 25/128 (19%)
Query: 52 IVDEPAQATTATSNTGDPLSPDNQAS-LSHVTKISPAT---------------------- 88
I + Q T+ +G ++ D A LSH T+ SPAT
Sbjct: 64 IQSDSVQQRHGTATSGSVVAEDTSAQQLSHTTRASPATYPRVLTVGIFGKAAASRLLSLA 123
Query: 89 --VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
+ WL+ NYETAEGVSLPR +L++HY++HC E+KLD VNAASFGKLIRSVF+GLRTRRL
Sbjct: 124 LVIHWLLQNYETAEGVSLPRCTLYSHYVKHCTEHKLDPVNAASFGKLIRSVFLGLRTRRL 183
Query: 147 GTRRGWRF 154
GTR ++
Sbjct: 184 GTRGNSKY 191
>gi|348536729|ref|XP_003455848.1| PREDICTED: MHC class II regulatory factor RFX1 [Oreochromis
niloticus]
Length = 857
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 51/73 (69%), Positives = 60/73 (82%)
Query: 82 TKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGL 141
++ PATVQWL DNYE AEGVSLPR +L+ HY+ HC E KL+ VNAASFGKLIRSVF+GL
Sbjct: 306 SRAPPATVQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFMGL 365
Query: 142 RTRRLGTRRGWRF 154
RTRRLGTR ++
Sbjct: 366 RTRRLGTRGNSKY 378
>gi|410917261|ref|XP_003972105.1| PREDICTED: MHC class II regulatory factor RFX1-like [Takifugu
rubripes]
Length = 832
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/73 (68%), Positives = 61/73 (83%)
Query: 82 TKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGL 141
++ PAT+QWL DNYE AEGVSLPR +L+ HY+ HC E+KL+ VNAASFGKLIRSVF+GL
Sbjct: 295 SRAPPATIQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEHKLEPVNAASFGKLIRSVFMGL 354
Query: 142 RTRRLGTRRGWRF 154
RTRRLGTR ++
Sbjct: 355 RTRRLGTRGNSKY 367
>gi|410950632|ref|XP_004001663.1| PREDICTED: LOW QUALITY PROTEIN: MHC class II regulatory factor RFX1
[Felis catus]
Length = 910
Score = 117 bits (292), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 50/66 (75%), Positives = 58/66 (87%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
VQWL+DNYETAEGVSLPRS+L+ HY+ HC E KL+ VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 372 VQWLLDNYETAEGVSLPRSTLYCHYLLHCQEQKLEPVNAASFGKLIRSVFMGLRTRRLGT 431
Query: 149 RRGWRF 154
R ++
Sbjct: 432 RGNSKY 437
>gi|308462035|ref|XP_003093304.1| CRE-DAF-19 protein [Caenorhabditis remanei]
gi|308250371|gb|EFO94323.1| CRE-DAF-19 protein [Caenorhabditis remanei]
Length = 665
Score = 117 bits (292), Expect = 2e-24, Method: Composition-based stats.
Identities = 64/132 (48%), Positives = 83/132 (62%), Gaps = 6/132 (4%)
Query: 22 QQTVEPTEHATIIA--TTASRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQASLS 79
Q V P TI A +T ++ P++N + D A A + P+S D+Q +
Sbjct: 50 QNAVTPNGTYTIYAPDSTYAQYYPYQNNMQSSPQDNGAYQVLAAPQS--PVSMDDQDGIQ 107
Query: 80 --HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSV 137
+ + SPATV WL DNYE AEG SLPR L++HY +HCAE+++D VNAASFGKLIRSV
Sbjct: 108 QPNAQRASPATVNWLFDNYEIAEGSSLPRCQLYDHYRKHCAEHRMDPVNAASFGKLIRSV 167
Query: 138 FIGLRTRRLGTR 149
F L+TRRLGTR
Sbjct: 168 FQNLKTRRLGTR 179
>gi|432848274|ref|XP_004066264.1| PREDICTED: MHC class II regulatory factor RFX1-like [Oryzias
latipes]
Length = 877
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 50/68 (73%), Positives = 58/68 (85%)
Query: 82 TKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGL 141
++ PATVQWL +NYE AEGVSLPR +L+ HY+ HC E KL+ VNAASFGKLIRSVF+GL
Sbjct: 335 SRAPPATVQWLCENYEGAEGVSLPRCTLYYHYLLHCQEQKLEPVNAASFGKLIRSVFVGL 394
Query: 142 RTRRLGTR 149
RTRRLGTR
Sbjct: 395 RTRRLGTR 402
>gi|358338223|dbj|GAA56556.1| regulatory factor X 1/2/3 [Clonorchis sinensis]
Length = 1268
Score = 115 bits (287), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 49/75 (65%), Positives = 63/75 (84%)
Query: 80 HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFI 139
H T+ SP TVQWL+DNYE+A+GVSL RS+L++HY+ HC EN L+ +N ASFGKLIRS+F+
Sbjct: 215 HSTRASPVTVQWLLDNYESADGVSLSRSALYSHYLSHCLENWLEPMNPASFGKLIRSIFV 274
Query: 140 GLRTRRLGTRRGWRF 154
GLRTRRLGTR ++
Sbjct: 275 GLRTRRLGTRGNSKY 289
>gi|156392417|ref|XP_001636045.1| predicted protein [Nematostella vectensis]
gi|156223144|gb|EDO43982.1| predicted protein [Nematostella vectensis]
Length = 492
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 50/61 (81%), Positives = 57/61 (93%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
VQWL++NYETAEGVSLPRS+L+NHY+ HC +KLD VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 1 VQWLLENYETAEGVSLPRSTLYNHYLTHCQTHKLDPVNAASFGKLIRSVFLGLRTRRLGT 60
Query: 149 R 149
R
Sbjct: 61 R 61
>gi|357613957|gb|EHJ68806.1| hypothetical protein KGM_13721 [Danaus plexippus]
Length = 705
Score = 114 bits (284), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 59/62 (95%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
TVQWL+D+YETAEGVSLPRS+L+ HY+RHC+ ++L+ VNAASFGKLIRSVF+GLRTRRLG
Sbjct: 207 TVQWLLDHYETAEGVSLPRSTLYAHYLRHCSTHRLEPVNAASFGKLIRSVFVGLRTRRLG 266
Query: 148 TR 149
TR
Sbjct: 267 TR 268
>gi|341877898|gb|EGT33833.1| CBN-DAF-19 protein [Caenorhabditis brenneri]
Length = 913
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 81/141 (57%), Gaps = 13/141 (9%)
Query: 16 NGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQ 75
NGTY I T + SP E T Y+V P P+S ++Q
Sbjct: 303 NGTYGIYGADSAYGQYYAYTTNNMQASPQE-TGSQYLVQAPQ----------SPISNEDQ 351
Query: 76 AS--LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
+ L + + SPATV WL DNYE AEG SLPR L++HY +HC E+++D VNAASFGKL
Sbjct: 352 ETTILQNNQRASPATVNWLFDNYEIAEGSSLPRCQLYDHYRKHCEEHRMDPVNAASFGKL 411
Query: 134 IRSVFIGLRTRRLGTRRGWRF 154
IRSVF L+TRRLGTR ++
Sbjct: 412 IRSVFQNLKTRRLGTRGNSKY 432
>gi|7245439|pdb|1DP7|P Chain P, Cocrystal Structure Of Rfx-Dbd In Complex With Its Cognate
X-Box Binding Site
Length = 76
Score = 113 bits (282), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 51/62 (82%), Positives = 57/62 (91%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
TVQWL+DNYETAEGVSLPRS+L+NHY+ H E KL+ VNAASFGKLIRSVF+GLRTRRLG
Sbjct: 1 TVQWLLDNYETAEGVSLPRSTLYNHYLLHSQEQKLEPVNAASFGKLIRSVFMGLRTRRLG 60
Query: 148 TR 149
TR
Sbjct: 61 TR 62
>gi|328724075|ref|XP_001947150.2| PREDICTED: hypothetical protein LOC100160856 [Acyrthosiphon pisum]
Length = 742
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 49/79 (62%), Positives = 62/79 (78%)
Query: 76 ASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIR 135
+ L KISPATV WL+DNYE AEGVSL RS+++++Y+ HC+E K D +NA SFGKLIR
Sbjct: 146 SGLIQANKISPATVDWLMDNYEKAEGVSLLRSTIYDNYLTHCSETKFDPLNAPSFGKLIR 205
Query: 136 SVFIGLRTRRLGTRRGWRF 154
SVF GL+TRRLGTR ++
Sbjct: 206 SVFTGLQTRRLGTRGNSKY 224
>gi|341893435|gb|EGT49370.1| hypothetical protein CAEBREN_31487 [Caenorhabditis brenneri]
Length = 625
Score = 110 bits (276), Expect = 1e-22, Method: Composition-based stats.
Identities = 64/136 (47%), Positives = 79/136 (58%), Gaps = 13/136 (9%)
Query: 16 NGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQ 75
NGTY I T + SP E T Y+V P P+S ++Q
Sbjct: 15 NGTYGIYGADSAYGQYYAYTTNNMQASPQE-TGSQYLVQAPQS----------PISNEDQ 63
Query: 76 AS--LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
+ L + + SPATV WL DNYE AEG SLPR L++HY +HC E+++D VNAASFGKL
Sbjct: 64 ETTILQNNQRASPATVNWLFDNYEIAEGSSLPRCQLYDHYRKHCEEHRMDPVNAASFGKL 123
Query: 134 IRSVFIGLRTRRLGTR 149
IRSVF L+TRRLGTR
Sbjct: 124 IRSVFQNLKTRRLGTR 139
>gi|328710478|ref|XP_003244275.1| PREDICTED: DNA-binding protein RFX2-like [Acyrthosiphon pisum]
Length = 700
Score = 110 bits (274), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/79 (60%), Positives = 62/79 (78%)
Query: 76 ASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIR 135
+ L KISPATV WL++NYE AEGVSL RS+++++Y+ HC+E K D +NA SFGKLIR
Sbjct: 219 SGLIQANKISPATVDWLMNNYEKAEGVSLLRSTIYDNYLTHCSETKFDPLNAPSFGKLIR 278
Query: 136 SVFIGLRTRRLGTRRGWRF 154
SVF GL+TRRLGTR ++
Sbjct: 279 SVFTGLQTRRLGTRGNSKY 297
>gi|312084989|ref|XP_003144499.1| regulatory factor X [Loa loa]
Length = 640
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 47/66 (71%), Positives = 57/66 (86%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWLI+NYE A+G SLPR +L++HYI+HC ENKL+ VNAASFGKLIRSVF GLRTRRLGT
Sbjct: 1 IQWLINNYEPADGTSLPRCTLYSHYIKHCNENKLEPVNAASFGKLIRSVFHGLRTRRLGT 60
Query: 149 RRGWRF 154
R ++
Sbjct: 61 RGNSKY 66
>gi|71988112|ref|NP_001022140.1| Protein DAF-19, isoform b [Caenorhabditis elegans]
gi|13432161|sp|Q09555.3|DAF19_CAEEL RecName: Full=RFX-like transcription factor daf-19; AltName:
Full=Abnormal dauer formation protein 19
gi|7381608|gb|AAF61564.1|AF226156_1 RFX-like transcription factor DAF-19 [Caenorhabditis elegans]
gi|14530436|emb|CAC42295.1| Protein DAF-19, isoform b [Caenorhabditis elegans]
Length = 805
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 13/114 (11%)
Query: 42 SPHENTEVAYIVDEPAQATTATSNTGDPLS-PDNQASLSHVTKISPATVQWLIDNYETAE 100
SP +N Y+V PA + + + D ++ P+NQ + SPATV WL +NYE E
Sbjct: 224 SPQDN--APYLV--PAPQSPVSIDDADSINLPNNQ-------RASPATVNWLFENYEIGE 272
Query: 101 GVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
G SLPR L++HY +HCAE+++D VNAASFGKLIRSVF L+TRRLGTR ++
Sbjct: 273 G-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKY 325
>gi|71988109|ref|NP_001022139.1| Protein DAF-19, isoform a [Caenorhabditis elegans]
gi|7542484|gb|AAF63475.1|AF233652_1 RFX-type transcription factor DAF-19 short variant [Caenorhabditis
elegans]
gi|3876596|emb|CAA88701.1| Protein DAF-19, isoform a [Caenorhabditis elegans]
Length = 780
Score = 107 bits (268), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 13/114 (11%)
Query: 42 SPHENTEVAYIVDEPAQATTATSNTGDPLS-PDNQASLSHVTKISPATVQWLIDNYETAE 100
SP +N Y+V PA + + + D ++ P+NQ + SPATV WL +NYE E
Sbjct: 199 SPQDNA--PYLV--PAPQSPVSIDDADSINLPNNQ-------RASPATVNWLFENYEIGE 247
Query: 101 GVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
G SLPR L++HY +HCAE+++D VNAASFGKLIRSVF L+TRRLGTR ++
Sbjct: 248 G-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKY 300
>gi|313247433|emb|CBY15668.1| unnamed protein product [Oikopleura dioica]
Length = 581
Score = 107 bits (267), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 60/140 (42%), Positives = 82/140 (58%), Gaps = 19/140 (13%)
Query: 25 VEPTEHATIIATTASRDSPHENTEVAYIVDEP---------------AQATTATSNTGDP 69
VE E + + T A P+ +T V Y+ +P AQ + + T P
Sbjct: 13 VEHAEQSKVYVTVAVHPGPNAHT-VPYVNAQPFVNPVAQHHVVGQYAAQPNVSHAQTPQP 71
Query: 70 LSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAAS 129
NQA H + SP TV+WL++N+ETAEGVSLPR+ +++HYI H + + VNAAS
Sbjct: 72 EYVLNQA---HPIRASPQTVKWLMENFETAEGVSLPRARMYDHYILHSEQTSQEPVNAAS 128
Query: 130 FGKLIRSVFIGLRTRRLGTR 149
FGKL+RSVF+ L+TRRLGTR
Sbjct: 129 FGKLVRSVFVNLKTRRLGTR 148
>gi|392891414|ref|NP_001254236.1| Protein DAF-19, isoform d [Caenorhabditis elegans]
gi|225878056|emb|CAX51691.2| Protein DAF-19, isoform d [Caenorhabditis elegans]
Length = 661
Score = 107 bits (266), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 57/114 (50%), Positives = 76/114 (66%), Gaps = 13/114 (11%)
Query: 42 SPHENTEVAYIVDEPAQATTATSNTGDPLS-PDNQASLSHVTKISPATVQWLIDNYETAE 100
SP +N Y+V PA + + + D ++ P+NQ + SPATV WL +NYE E
Sbjct: 80 SPQDNA--PYLV--PAPQSPVSIDDADSINLPNNQ-------RASPATVNWLFENYEIGE 128
Query: 101 GVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
G SLPR L++HY +HCAE+++D VNAASFGKLIRSVF L+TRRLGTR ++
Sbjct: 129 G-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTRGNSKY 181
>gi|392891416|ref|NP_001254237.1| Protein DAF-19, isoform c [Caenorhabditis elegans]
gi|193299662|gb|ACF17932.1| DAF-19 isoform M [Caenorhabditis elegans]
gi|211970345|emb|CAR97827.1| Protein DAF-19, isoform c [Caenorhabditis elegans]
Length = 622
Score = 104 bits (260), Expect = 1e-20, Method: Composition-based stats.
Identities = 57/111 (51%), Positives = 75/111 (67%), Gaps = 13/111 (11%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGDPLS-PDNQASLSHVTKISPATVQWLIDNYET 98
+ SP +N Y+V PA + + + D ++ P+NQ + SPATV WL +NYE
Sbjct: 39 QSSPQDNA--PYLV--PAPQSPVSIDDADSINLPNNQ-------RASPATVNWLFENYEI 87
Query: 99 AEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
EG SLPR L++HY +HCAE+++D VNAASFGKLIRSVF L+TRRLGTR
Sbjct: 88 GEG-SLPRCELYDHYKKHCAEHRMDPVNAASFGKLIRSVFHNLKTRRLGTR 137
>gi|47223867|emb|CAG06044.1| unnamed protein product [Tetraodon nigroviridis]
Length = 559
Score = 104 bits (259), Expect = 1e-20, Method: Composition-based stats.
Identities = 47/61 (77%), Positives = 54/61 (88%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL DNYE AEGVSLPR +L+ HY+ HC E+KL+ VNAASFGKLIRSVF+GLRTRRLGT
Sbjct: 53 IQWLCDNYEGAEGVSLPRCTLYYHYLLHCQEHKLEPVNAASFGKLIRSVFMGLRTRRLGT 112
Query: 149 R 149
R
Sbjct: 113 R 113
>gi|58865916|ref|NP_001012172.1| regulatory factor X, 3 (influences HLA class II expression) [Rattus
norvegicus]
gi|55249810|gb|AAH85953.1| Regulatory factor X, 3 (influences HLA class II expression) [Rattus
norvegicus]
Length = 458
Score = 104 bits (259), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 63/149 (42%), Positives = 83/149 (55%), Gaps = 29/149 (19%)
Query: 2 VQVSNAPAQLIGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENTEVAYIVDEPAQATT 61
+Q+ QLI + GTYLI ++E + H+ T AS PA
Sbjct: 118 IQMGVTGGQLISSSGGTYLIGNSMENSGHSVTHTTRAS----------------PATIEM 161
Query: 62 A--TSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE 119
A T D LS +H + + + +QWL+DNYETAEGVSLPRS+L+NHY+RHC E
Sbjct: 162 AIETLQKSDGLS-------THRSSLLNSHLQWLLDNYETAEGVSLPRSTLYNHYLRHCQE 214
Query: 120 NKLDAVNAASFGKLIRS----VFIGLRTR 144
+KLD VNAASFGKLIR + G+R +
Sbjct: 215 HKLDPVNAASFGKLIRGNSKYHYYGIRVK 243
>gi|355755359|gb|EHH59106.1| Regulatory factor X 2 [Macaca fascicularis]
Length = 678
Score = 103 bits (258), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 79 SHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
SH + + + +QWL+DNYETAEGVSLPRSSL+NHY+RHC E+KLD VNAASFGKLIRSVF
Sbjct: 188 SHKSGLLNSHLQWLLDNYETAEGVSLPRSSLYNHYLRHCQEHKLDPVNAASFGKLIRSVF 247
Query: 139 I 139
+
Sbjct: 248 M 248
>gi|182217|gb|AAA58461.1| estrogen receptor-related protein [Homo sapiens]
Length = 336
Score = 95.1 bits (235), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 47/83 (56%), Positives = 57/83 (68%), Gaps = 3/83 (3%)
Query: 67 GDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVN 126
GD +N+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VN
Sbjct: 253 GDEEKENNRASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVN 309
Query: 127 AASFGKLIRSVFIGLRTRRLGTR 149
AASFGK+IR F L TRRLGTR
Sbjct: 310 AASFGKIIRQQFPQLTTRRLGTR 332
>gi|345326790|ref|XP_001508397.2| PREDICTED: transcription factor RFX4-like [Ornithorhynchus
anatinus]
Length = 825
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/77 (58%), Positives = 55/77 (71%), Gaps = 3/77 (3%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
+N+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK
Sbjct: 138 ENRASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGK 194
Query: 133 LIRSVFIGLRTRRLGTR 149
+IR F L TRRLGTR
Sbjct: 195 IIRQQFPQLTTRRLGTR 211
>gi|326434373|gb|EGD79943.1| hypothetical protein PTSG_10225 [Salpingoeca sp. ATCC 50818]
Length = 738
Score = 92.8 bits (229), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/81 (55%), Positives = 55/81 (67%), Gaps = 1/81 (1%)
Query: 69 PLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
P P N + ++++ +PATV WL +N+E E VSL R L+ HYI HC E D VN A
Sbjct: 88 PARPSNPYT-HNISRTAPATVVWLHENFEACEDVSLGREPLYKHYIDHCKEMGQDPVNQA 146
Query: 129 SFGKLIRSVFIGLRTRRLGTR 149
SFGKLIRSVF L+TRRLGTR
Sbjct: 147 SFGKLIRSVFPNLKTRRLGTR 167
>gi|449482010|ref|XP_002196607.2| PREDICTED: transcription factor RFX4 [Taeniopygia guttata]
Length = 807
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 123 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 179
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 180 RQQFPQLTTRRLGTR 194
>gi|386782235|ref|NP_001247990.1| transcription factor RFX4 [Macaca mulatta]
gi|380815328|gb|AFE79538.1| transcription factor RFX4 isoform c [Macaca mulatta]
Length = 738
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|426373977|ref|XP_004053860.1| PREDICTED: transcription factor RFX4 isoform 2 [Gorilla gorilla
gorilla]
Length = 735
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|338721228|ref|XP_003364334.1| PREDICTED: transcription factor RFX4 isoform 3 [Equus caballus]
Length = 743
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|402887517|ref|XP_003907138.1| PREDICTED: transcription factor RFX4 isoform 1 [Papio anubis]
Length = 738
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|345777139|ref|XP_851020.2| PREDICTED: transcription factor RFX4 isoform 2 [Canis lupus
familiaris]
Length = 735
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|208965428|dbj|BAG72728.1| regulatory factor X, 4 [synthetic construct]
Length = 705
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|426373979|ref|XP_004053861.1| PREDICTED: transcription factor RFX4 isoform 3 [Gorilla gorilla
gorilla]
Length = 744
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|426225177|ref|XP_004006744.1| PREDICTED: transcription factor RFX4 isoform 1 [Ovis aries]
Length = 735
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|194226740|ref|XP_001499083.2| PREDICTED: transcription factor RFX4 isoform 1 [Equus caballus]
Length = 734
Score = 90.5 bits (223), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|410965429|ref|XP_003989250.1| PREDICTED: transcription factor RFX4 isoform 1 [Felis catus]
Length = 735
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|403275976|ref|XP_003929694.1| PREDICTED: transcription factor RFX4 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 735
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|354486334|ref|XP_003505336.1| PREDICTED: transcription factor RFX4-like isoform 2 [Cricetulus
griseus]
Length = 736
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|402887519|ref|XP_003907139.1| PREDICTED: transcription factor RFX4 isoform 2 [Papio anubis]
Length = 747
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|296487428|tpg|DAA29541.1| TPA: regulatory factor X, 4 (influences HLA class II expression)
isoform 1 [Bos taurus]
Length = 744
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|332241694|ref|XP_003270013.1| PREDICTED: transcription factor RFX4 isoform 2 [Nomascus
leucogenys]
Length = 735
Score = 90.1 bits (222), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|23428950|gb|AAM52484.1| winged-helix transcription factor RFX4 variant 3 [Homo sapiens]
Length = 735
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|355564642|gb|EHH21142.1| hypothetical protein EGK_04144 [Macaca mulatta]
gi|355786485|gb|EHH66668.1| hypothetical protein EGM_03707 [Macaca fascicularis]
Length = 747
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|449276421|gb|EMC84953.1| Transcription factor RFX4, partial [Columba livia]
Length = 733
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 49 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 105
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 106 RQQFPQLTTRRLGTR 120
>gi|81157962|dbj|BAE48231.1| regulatory factor X4, isoform c [Homo sapiens]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|326912145|ref|XP_003202414.1| PREDICTED: transcription factor RFX4-like [Meleagris gallopavo]
Length = 790
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 106 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 162
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 163 RQQFPQLTTRRLGTR 177
>gi|81157964|dbj|BAE48232.1| regulatory factor X4, isoform d [Homo sapiens]
Length = 735
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|345777142|ref|XP_003431559.1| PREDICTED: transcription factor RFX4 [Canis lupus familiaris]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|327272328|ref|XP_003220937.1| PREDICTED: transcription factor RFX4-like [Anolis carolinensis]
Length = 745
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 69 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 128
Query: 145 RLGTR 149
RLGTR
Sbjct: 129 RLGTR 133
>gi|331999966|ref|NP_001193620.1| transcription factor RFX4 isoform d [Homo sapiens]
gi|114646709|ref|XP_509336.2| PREDICTED: transcription factor RFX4 isoform 6 [Pan troglodytes]
gi|397525264|ref|XP_003832594.1| PREDICTED: transcription factor RFX4 isoform 2 [Pan paniscus]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|440907715|gb|ELR57825.1| Transcription factor RFX4, partial [Bos grunniens mutus]
Length = 725
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 41 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 97
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 98 RQQFPQLTTRRLGTR 112
>gi|410965431|ref|XP_003989251.1| PREDICTED: transcription factor RFX4 isoform 2 [Felis catus]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|301784549|ref|XP_002927690.1| PREDICTED: transcription factor RFX4-like [Ailuropoda melanoleuca]
Length = 750
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 66 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 122
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 123 RQQFPQLTTRRLGTR 137
>gi|47132527|ref|NP_998759.1| transcription factor RFX4 isoform c [Homo sapiens]
gi|332840240|ref|XP_001161826.2| PREDICTED: transcription factor RFX4 isoform 4 [Pan troglodytes]
gi|397525262|ref|XP_003832593.1| PREDICTED: transcription factor RFX4 isoform 1 [Pan paniscus]
gi|332278145|sp|Q33E94.2|RFX4_HUMAN RecName: Full=Transcription factor RFX4; AltName: Full=Regulatory
factor X 4; AltName: Full=Testis development protein
NYD-SP10
gi|119618188|gb|EAW97782.1| regulatory factor X, 4 (influences HLA class II expression),
isoform CRA_a [Homo sapiens]
gi|158256326|dbj|BAF84134.1| unnamed protein product [Homo sapiens]
Length = 735
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|281338613|gb|EFB14197.1| hypothetical protein PANDA_017493 [Ailuropoda melanoleuca]
Length = 721
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 37 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 93
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 94 RQQFPQLTTRRLGTR 108
>gi|297692825|ref|XP_002823732.1| PREDICTED: transcription factor RFX4 isoform 2 [Pongo abelii]
Length = 735
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|350583866|ref|XP_003126131.3| PREDICTED: transcription factor RFX4 [Sus scrofa]
Length = 886
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|118082811|ref|XP_416306.2| PREDICTED: transcription factor RFX4 [Gallus gallus]
Length = 784
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 100 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 156
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 157 RQQFPQLTTRRLGTR 171
>gi|426225181|ref|XP_004006746.1| PREDICTED: transcription factor RFX4 isoform 3 [Ovis aries]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|297692823|ref|XP_002823731.1| PREDICTED: transcription factor RFX4 isoform 1 [Pongo abelii]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|126339786|ref|XP_001374936.1| PREDICTED: transcription factor RFX4 [Monodelphis domestica]
Length = 732
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 48 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 104
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 105 RQQFPQLTTRRLGTR 119
>gi|67906191|ref|NP_001020089.1| transcription factor RFX4 isoform 1 [Mus musculus]
gi|81912034|sp|Q7TNK1.1|RFX4_MOUSE RecName: Full=Transcription factor RFX4; AltName: Full=Regulatory
factor X 4
gi|33359240|gb|AAQ17042.1| regulatory factor X 4 variant [Mus musculus]
gi|36314596|gb|AAM52485.2| winged-helix transcription factor RFX4 variant 3 [Mus musculus]
gi|41015986|dbj|BAD07408.1| brain-specific regulatory factor X 4 [Mus musculus]
Length = 735
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 58 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 117
Query: 145 RLGTR 149
RLGTR
Sbjct: 118 RLGTR 122
>gi|395819920|ref|XP_003783326.1| PREDICTED: transcription factor RFX4 isoform 1 [Otolemur garnettii]
Length = 735
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 58 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 117
Query: 145 RLGTR 149
RLGTR
Sbjct: 118 RLGTR 122
>gi|395538373|ref|XP_003771157.1| PREDICTED: transcription factor RFX4 [Sarcophilus harrisii]
Length = 767
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 83 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 139
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 140 RQQFPQLTTRRLGTR 154
>gi|26329719|dbj|BAC28598.1| unnamed protein product [Mus musculus]
Length = 725
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 48 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 107
Query: 145 RLGTR 149
RLGTR
Sbjct: 108 RLGTR 112
>gi|194380922|dbj|BAG64029.1| unnamed protein product [Homo sapiens]
Length = 247
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|395819922|ref|XP_003783327.1| PREDICTED: transcription factor RFX4 isoform 2 [Otolemur garnettii]
Length = 744
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 44/75 (58%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|148689461|gb|EDL21408.1| regulatory factor X, 4 (influences HLA class II expression),
isoform CRA_a [Mus musculus]
Length = 693
Score = 90.1 bits (222), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 58 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 117
Query: 145 RLGTR 149
RLGTR
Sbjct: 118 RLGTR 122
>gi|351713400|gb|EHB16319.1| Transcription factor RFX4, partial [Heterocephalus glaber]
Length = 720
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 44 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 103
Query: 145 RLGTR 149
RLGTR
Sbjct: 104 RLGTR 108
>gi|392341436|ref|XP_002726934.2| PREDICTED: transcription factor RFX4-like [Rattus norvegicus]
Length = 693
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 110 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 169
Query: 145 RLGTR 149
RLGTR
Sbjct: 170 RLGTR 174
>gi|148689463|gb|EDL21410.1| regulatory factor X, 4 (influences HLA class II expression),
isoform CRA_c [Mus musculus]
Length = 808
Score = 89.7 bits (221), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 131 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 190
Query: 145 RLGTR 149
RLGTR
Sbjct: 191 RLGTR 195
>gi|149067365|gb|EDM17098.1| similar to regulatory factor X 4 variant (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 460
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 58 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 117
Query: 145 RLGTR 149
RLGTR
Sbjct: 118 RLGTR 122
>gi|14278918|dbj|BAB59001.1| transcription factor RFX4 [Homo sapiens]
gi|119618189|gb|EAW97783.1| regulatory factor X, 4 (influences HLA class II expression),
isoform CRA_b [Homo sapiens]
Length = 563
Score = 89.7 bits (221), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 49/65 (75%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TR
Sbjct: 67 TPATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTR 126
Query: 145 RLGTR 149
RLGTR
Sbjct: 127 RLGTR 131
>gi|348551949|ref|XP_003461791.1| PREDICTED: LOW QUALITY PROTEIN: transcription factor RFX4-like
[Cavia porcellus]
Length = 750
Score = 88.2 bits (217), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 53/75 (70%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C ++ VNAASFGK+I
Sbjct: 60 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKSDTQPVNAASFGKII 116
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 117 RQQFPQLTTRRLGTR 131
>gi|167537360|ref|XP_001750349.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771177|gb|EDQ84848.1| predicted protein [Monosiga brevicollis MX1]
Length = 788
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 49/70 (70%)
Query: 80 HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFI 139
++++ SPATV WL +N+E + SL R LF HYI HC + VN ASFGKLIRSVF
Sbjct: 250 NISRTSPATVVWLHENFEACDDTSLGREPLFAHYIEHCKTLNQEPVNQASFGKLIRSVFP 309
Query: 140 GLRTRRLGTR 149
L+TRRLGTR
Sbjct: 310 NLKTRRLGTR 319
>gi|195997083|ref|XP_002108410.1| hypothetical protein TRIADDRAFT_51266 [Trichoplax adhaerens]
gi|190589186|gb|EDV29208.1| hypothetical protein TRIADDRAFT_51266 [Trichoplax adhaerens]
Length = 557
Score = 86.3 bits (212), Expect = 4e-15, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 62/96 (64%), Gaps = 1/96 (1%)
Query: 59 ATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCA 118
A + T P +Q+ +S+ + P T +WL++NYE A+GVSL RS+++NHY+ C
Sbjct: 6 AASCQIGTNSPTGDADQSPMSN-KLLCPVTAKWLMENYEVADGVSLARSAIYNHYLDFCQ 64
Query: 119 ENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+N L + NAASFGK+IR ++ ++ RRLG R +F
Sbjct: 65 KNDLTSANAASFGKIIRRIYPQVKNRRLGQRGQSKF 100
>gi|431914606|gb|ELK15794.1| MHC class II regulatory factor RFX1 [Pteropus alecto]
Length = 93
Score = 86.3 bits (212), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/83 (50%), Positives = 52/83 (62%)
Query: 67 GDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVN 126
G + + S S+ SPATVQWL+DNY+ A VSLPRS+L HY H E KL+ +
Sbjct: 4 GSYMLGNASQSYSYTICASPATVQWLLDNYDMARDVSLPRSTLCCHYFLHFQEQKLELIK 63
Query: 127 AASFGKLIRSVFIGLRTRRLGTR 149
A SF KLI +F+GLRT L TR
Sbjct: 64 AISFDKLIHLIFMGLRTCHLETR 86
>gi|410907714|ref|XP_003967336.1| PREDICTED: transcription factor RFX4-like [Takifugu rubripes]
Length = 736
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
+N+AS H T PAT++WL +NYE AEGV +PRS+L+ HY+ ++ VNAASFGK
Sbjct: 49 NNRASKPHST---PATLEWLEENYEMAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGK 105
Query: 133 LIRSVFIGLRTRRLGTR 149
+IR F L TRRLGTR
Sbjct: 106 IIRQQFPALTTRRLGTR 122
>gi|166225158|sp|A2BGA0.1|RFX4_DANRE RecName: Full=Transcription factor RFX4; AltName: Full=Regulatory
factor X 4
Length = 735
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C + VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|190336674|gb|AAI62501.1| Regulatory factor X, 4 [Danio rerio]
Length = 735
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C + VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|156138745|dbj|BAF75865.1| winged-helix transcription factor RFX4 [Danio rerio]
Length = 735
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 43/75 (57%), Positives = 52/75 (69%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C + VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKLDSQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|449685102|ref|XP_002163641.2| PREDICTED: transcription factor RFX4-like [Hydra magnipapillata]
Length = 578
Score = 85.9 bits (211), Expect = 5e-15, Method: Composition-based stats.
Identities = 40/65 (61%), Positives = 47/65 (72%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
SP T QWL +NYE EGVSLPR +L+ HY+ C + VNAASFGK+IRS F L+TR
Sbjct: 15 SPVTTQWLHENYEMLEGVSLPRIALYTHYLDFCNSTNVTPVNAASFGKIIRSTFPELKTR 74
Query: 145 RLGTR 149
RLGTR
Sbjct: 75 RLGTR 79
>gi|432862245|ref|XP_004069759.1| PREDICTED: transcription factor RFX4-like isoform 2 [Oryzias
latipes]
Length = 736
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
+N+AS H T PAT++WL +NYE AEGV +PRS+L+ HY+ ++ VNAASFGK
Sbjct: 49 NNRASKPHST---PATLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGK 105
Query: 133 LIRSVFIGLRTRRLGTR 149
+IR F L TRRLGTR
Sbjct: 106 IIRQQFPALTTRRLGTR 122
>gi|47219786|emb|CAG03413.1| unnamed protein product [Tetraodon nigroviridis]
Length = 665
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
+N+AS H T PAT++WL +NYE AEGV +PRS+L+ HY+ ++ VNAASFGK
Sbjct: 35 NNRASKPHST---PATLEWLEENYEMAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGK 91
Query: 133 LIRSVFIGLRTRRLGTR 149
+IR F L TRRLGTR
Sbjct: 92 IIRQQFPALTTRRLGTR 108
>gi|348505723|ref|XP_003440410.1| PREDICTED: transcription factor RFX4-like [Oreochromis niloticus]
Length = 736
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
+N+AS H T PAT++WL +NYE AEGV +PRS+L+ HY+ ++ VNAASFGK
Sbjct: 49 NNRASKPHST---PATLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGK 105
Query: 133 LIRSVFIGLRTRRLGTR 149
+IR F L TRRLGTR
Sbjct: 106 IIRQQFPALTTRRLGTR 122
>gi|432862171|ref|XP_004069758.1| PREDICTED: transcription factor RFX4-like isoform 1 [Oryzias
latipes]
Length = 733
Score = 85.9 bits (211), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 42/77 (54%), Positives = 54/77 (70%), Gaps = 3/77 (3%)
Query: 73 DNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
+N+AS H T PAT++WL +NYE AEGV +PRS+L+ HY+ ++ VNAASFGK
Sbjct: 49 NNRASKPHST---PATLEWLEENYEIAEGVCIPRSALYMHYLDFSEKHDTQPVNAASFGK 105
Query: 133 LIRSVFIGLRTRRLGTR 149
+IR F L TRRLGTR
Sbjct: 106 IIRQQFPALTTRRLGTR 122
>gi|405970221|gb|EKC35149.1| Transcription factor RFX4 [Crassostrea gigas]
Length = 643
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 14/108 (12%)
Query: 54 DEPAQATTATSNTGDPLSP----DNQASLSHVTKI--------SPATVQWLIDNYETAEG 101
D P+ + NT SP D +A+L + ++ +P+T++WL +NYE AE
Sbjct: 31 DRPSTSNVCPDNTSP--SPKRFGDEEANLGNFLRLRNCSKSHSTPSTLKWLEENYEIAEA 88
Query: 102 VSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
V +PRS+L+ HY+ +C N VNAASFGK+IR F + TRRLGTR
Sbjct: 89 VCIPRSTLYCHYLDYCETNDTQPVNAASFGKIIRQQFPQITTRRLGTR 136
>gi|242010692|ref|XP_002426094.1| rfx4, putative [Pediculus humanus corporis]
gi|212510127|gb|EEB13356.1| rfx4, putative [Pediculus humanus corporis]
Length = 498
Score = 84.3 bits (207), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 48/65 (73%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+ WL NYE AEG+ +PR++L++HY+ C N + +N+ASFGK+IR F L TR
Sbjct: 30 TPATLLWLGKNYELAEGICIPRNTLYSHYVHFCQTNSMSPLNSASFGKIIRQAFPSLTTR 89
Query: 145 RLGTR 149
RLGTR
Sbjct: 90 RLGTR 94
>gi|443706948|gb|ELU02782.1| hypothetical protein CAPTEDRAFT_183181 [Capitella teleta]
Length = 495
Score = 84.3 bits (207), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/96 (47%), Positives = 57/96 (59%), Gaps = 5/96 (5%)
Query: 56 PAQATTATSN--TGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHY 113
P+ T T N T D + S H T P T++WL + YE AEGV +PRS+L+ HY
Sbjct: 32 PSSGGTGTKNLSTSDERKENRIPSKPHST---PLTLKWLEETYEIAEGVCIPRSTLYLHY 88
Query: 114 IRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+ C +N VNAASFGK+IR F L TRRLGTR
Sbjct: 89 LDFCEKNDSQPVNAASFGKIIRQQFPHLTTRRLGTR 124
>gi|390333445|ref|XP_003723712.1| PREDICTED: transcription factor RFX3-like [Strongylocentrotus
purpuratus]
Length = 856
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 44/65 (67%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
S T WL+ NYE ++G SLPR ++ HY+ C N L VNAASFGK IR VF +RTR
Sbjct: 74 SATTFSWLMQNYEASQGYSLPRCLIYEHYLDFCQRNVLQPVNAASFGKTIRQVFPDIRTR 133
Query: 145 RLGTR 149
RLGTR
Sbjct: 134 RLGTR 138
>gi|45387831|ref|NP_991275.1| transcription factor RFX4 [Danio rerio]
gi|23428953|gb|AAM52486.1| winged-helix transcription factor RFX4 variant 3 [Danio rerio]
Length = 735
Score = 83.6 bits (205), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/75 (56%), Positives = 51/75 (68%), Gaps = 3/75 (4%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PR +L+ HY+ C + VNAASFGK+I
Sbjct: 51 RASKPHST---PATLQWLEENYEIAEGVCIPRIALYMHYLDFCEKLDSQPVNAASFGKII 107
Query: 135 RSVFIGLRTRRLGTR 149
R F L TRRLGTR
Sbjct: 108 RQQFPQLTTRRLGTR 122
>gi|440798283|gb|ELR19351.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1000
Score = 83.2 bits (204), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 46/65 (70%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
SP +QWL DN+E S+PRS +++HY C + AVNAASFGKLIRSVF L+TR
Sbjct: 126 SPLILQWLQDNFENDPKSSVPRSLMYSHYYSFCTHASVKAVNAASFGKLIRSVFPDLKTR 185
Query: 145 RLGTR 149
RLGTR
Sbjct: 186 RLGTR 190
>gi|156367542|ref|XP_001627475.1| predicted protein [Nematostella vectensis]
gi|156214386|gb|EDO35375.1| predicted protein [Nematostella vectensis]
Length = 410
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 46/58 (79%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NYE A+GVSLPRS+L++HY+ C +N L VNAASFGK+IR F L+TRRLGTR
Sbjct: 1 LNENYEVADGVSLPRSALYSHYLDFCEKNSLSPVNAASFGKIIRHTFPNLKTRRLGTR 58
>gi|321476524|gb|EFX87484.1| hypothetical protein DAPPUDRAFT_42744 [Daphnia pulex]
Length = 471
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/65 (55%), Positives = 50/65 (76%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+PAT+ WL +NYE A+GV +PR++L+ HY+ C+++ + VNAASFGK+IR F L TR
Sbjct: 6 TPATLLWLEENYEMAQGVCVPRNTLYLHYVDFCSKHGMTPVNAASFGKIIRQQFPQLTTR 65
Query: 145 RLGTR 149
RLGTR
Sbjct: 66 RLGTR 70
>gi|326426667|gb|EGD72237.1| hypothetical protein PTSG_00258 [Salpingoeca sp. ATCC 50818]
Length = 1207
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 36/67 (53%), Positives = 45/67 (67%)
Query: 83 KISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLR 142
+ +P QWL ++Y AEGVS+PRS + HY C E + +NAASFGK+IR F LR
Sbjct: 160 RQTPIIKQWLNEHYNPAEGVSVPRSLFYEHYCTLCKEASMSPLNAASFGKMIRQEFPMLR 219
Query: 143 TRRLGTR 149
TRRLGTR
Sbjct: 220 TRRLGTR 226
>gi|326677234|ref|XP_684953.3| PREDICTED: DNA-binding protein RFX6 [Danio rerio]
gi|292630945|sp|Q5RJA1.2|RFX6_DANRE RecName: Full=DNA-binding protein RFX6; AltName: Full=Regulatory
factor X 6
Length = 848
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL DNY EGV LPR L+ HY+ C + KLD AA+FGK IR F L TRRLG
Sbjct: 56 TLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLDPACAATFGKTIRQKFPLLTTRRLG 115
Query: 148 TR 149
TR
Sbjct: 116 TR 117
>gi|405971039|gb|EKC35896.1| DNA-binding protein RFX6 [Crassostrea gigas]
Length = 804
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 45 ENTEVAYIVDEPAQATTATSNTGDPLSPDNQASLSHVTKISP---ATVQWLIDNYETAEG 101
EN+ + I +P++ ++S + N+ + S T+ T++WL +NYE AEG
Sbjct: 40 ENSTRSDIKKQPSENIGSSSENTETKKDQNENTKSDSTQKQSQVACTLKWLSENYERAEG 99
Query: 102 VSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
V LPR L+ HY+ C + K AA+FGK+IR F + TRRLGTR
Sbjct: 100 VCLPRCVLYTHYLDFCKKMKYTPAGAATFGKIIRQKFSKITTRRLGTR 147
>gi|338710647|ref|XP_001916865.2| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX6-like
[Equus caballus]
Length = 902
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 50/84 (59%), Gaps = 3/84 (3%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TRRGWRFLSS---SQSALTRVIAL 168
TR +F S ++ TR +L
Sbjct: 184 TRGHSKFSGSKLKNEGGFTRKYSL 207
>gi|449497894|ref|XP_002190338.2| PREDICTED: DNA-binding protein RFX6 [Taeniopygia guttata]
Length = 942
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/114 (39%), Positives = 59/114 (51%), Gaps = 5/114 (4%)
Query: 40 RDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQASLSHVTKISPA----TVQWLIDN 95
RD +E +E A A D SP ++ S++ + K T+QWL +N
Sbjct: 88 RDQTRFGSEALSSEEEDADARDGALTAADQ-SPSSKKSITQIMKDKKKQTQLTLQWLEEN 146
Query: 96 YETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
Y EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLGTR
Sbjct: 147 YIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTR 200
>gi|392349309|ref|XP_576205.4| PREDICTED: transcription factor RFX4-like [Rattus norvegicus]
Length = 681
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TRRLGTR
Sbjct: 52 LEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTR 109
>gi|260618471|gb|ACX47362.1| RFX6 [Mus musculus]
Length = 893
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL DNY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|444511896|gb|ELV09970.1| Transcription factor RFX4 [Tupaia chinensis]
Length = 1159
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 42/58 (72%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK+IR F L TRRLGTR
Sbjct: 50 LEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTR 107
>gi|226874821|ref|NP_001152861.1| DNA-binding protein RFX6 isoform 1 [Mus musculus]
gi|166225160|sp|Q8C7R7.2|RFX6_MOUSE RecName: Full=DNA-binding protein RFX6; AltName: Full=Regulatory
factor X 6; AltName: Full=Regulatory factor X
domain-containing protein 1
Length = 927
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL DNY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|354496538|ref|XP_003510383.1| PREDICTED: DNA-binding protein RFX6-like [Cricetulus griseus]
Length = 1090
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/62 (56%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL DNY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 286 TLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 345
Query: 148 TR 149
TR
Sbjct: 346 TR 347
>gi|431838746|gb|ELK00676.1| DNA-binding protein RFX6 [Pteropus alecto]
Length = 828
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 43/67 (64%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TRRGWRF 154
TR +F
Sbjct: 184 TRGHSKF 190
>gi|115629228|ref|XP_790469.2| PREDICTED: DNA-binding protein RFX6-like [Strongylocentrotus
purpuratus]
Length = 942
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L++HY+ C + LD AA+FGK IR F L TRRLG
Sbjct: 100 TLQWLEENYCICEGVCLPRCILYSHYLDFCRKETLDPACAATFGKTIRQKFPNLTTRRLG 159
Query: 148 TR 149
TR
Sbjct: 160 TR 161
>gi|449277977|gb|EMC85977.1| DNA-binding protein RFX6, partial [Columba livia]
Length = 857
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 71 SPDNQASLSHVTKISPA----TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVN 126
SP + S++ + K T+QWL +NY EGV LPR L+ HY+ C + KL+
Sbjct: 34 SPSAKKSITQIMKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPAC 93
Query: 127 AASFGKLIRSVFIGLRTRRLGTR 149
AA+FGK IR F L TRRLGTR
Sbjct: 94 AATFGKTIRQKFPLLTTRRLGTR 116
>gi|119568597|gb|EAW48212.1| regulatory factor X domain containing 1, isoform CRA_a [Homo
sapiens]
Length = 189
Score = 75.5 bits (184), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|344264461|ref|XP_003404310.1| PREDICTED: DNA-binding protein RFX6-like [Loxodonta africana]
Length = 929
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|355562111|gb|EHH18743.1| hypothetical protein EGK_15407 [Macaca mulatta]
Length = 932
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|109072898|ref|XP_001110999.1| PREDICTED: DNA-binding protein RFX6-like [Macaca mulatta]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|395816350|ref|XP_003781667.1| PREDICTED: DNA-binding protein RFX6 [Otolemur garnettii]
Length = 925
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|281345843|gb|EFB21427.1| hypothetical protein PANDA_013423 [Ailuropoda melanoleuca]
Length = 937
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|332213115|ref|XP_003255664.1| PREDICTED: DNA-binding protein RFX6 [Nomascus leucogenys]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|326916013|ref|XP_003204306.1| PREDICTED: DNA-binding protein RFX6-like [Meleagris gallopavo]
Length = 871
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 71 SPDNQASLSHVTKISPA----TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVN 126
SP + S++ + K T+QWL +NY EGV LPR L+ HY+ C + KL+
Sbjct: 48 SPSPKKSITQMMKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPAC 107
Query: 127 AASFGKLIRSVFIGLRTRRLGTR 149
AA+FGK IR F L TRRLGTR
Sbjct: 108 AATFGKTIRQKFPLLTTRRLGTR 130
>gi|297678985|ref|XP_002817326.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX6 [Pongo
abelii]
Length = 936
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|301777466|ref|XP_002924145.1| PREDICTED: DNA-binding protein RFX6-like [Ailuropoda melanoleuca]
gi|292630941|sp|D2HNW6.2|RFX6_AILME RecName: Full=DNA-binding protein RFX6; AltName: Full=Regulatory
factor X 6
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|363732309|ref|XP_419769.3| PREDICTED: DNA-binding protein RFX6 [Gallus gallus]
Length = 937
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 49/83 (59%), Gaps = 4/83 (4%)
Query: 71 SPDNQASLSHVTKISPA----TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVN 126
SP + S++ + K T+QWL +NY EGV LPR L+ HY+ C + KL+
Sbjct: 112 SPSPKKSITQMMKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPAC 171
Query: 127 AASFGKLIRSVFIGLRTRRLGTR 149
AA+FGK IR F L TRRLGTR
Sbjct: 172 AATFGKTIRQKFPLLTTRRLGTR 194
>gi|355748952|gb|EHH53435.1| hypothetical protein EGM_14074 [Macaca fascicularis]
Length = 932
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|426234479|ref|XP_004011223.1| PREDICTED: DNA-binding protein RFX6 [Ovis aries]
Length = 927
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|258547126|ref|NP_775831.2| DNA-binding protein RFX6 [Homo sapiens]
gi|166225159|sp|Q8HWS3.2|RFX6_HUMAN RecName: Full=DNA-binding protein RFX6; AltName: Full=Regulatory
factor X 6; AltName: Full=Regulatory factor X
domain-containing protein 1
gi|119568598|gb|EAW48213.1| regulatory factor X domain containing 1, isoform CRA_b [Homo
sapiens]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|397514732|ref|XP_003827628.1| PREDICTED: DNA-binding protein RFX6 [Pan paniscus]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|24660190|gb|AAH39248.1| Regulatory factor X, 6 [Homo sapiens]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|440905163|gb|ELR55583.1| DNA-binding protein RFX6 [Bos grunniens mutus]
Length = 926
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|402868449|ref|XP_003898315.1| PREDICTED: DNA-binding protein RFX6 [Papio anubis]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|403295495|ref|XP_003938677.1| PREDICTED: DNA-binding protein RFX6 [Saimiri boliviensis
boliviensis]
Length = 927
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|359068722|ref|XP_003586511.1| PREDICTED: DNA-binding protein RFX6-like [Bos taurus]
Length = 927
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|358413752|ref|XP_003582649.1| PREDICTED: DNA-binding protein RFX6-like [Bos taurus]
Length = 927
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 182
Query: 148 TR 149
TR
Sbjct: 183 TR 184
>gi|114609051|ref|XP_527584.2| PREDICTED: DNA-binding protein RFX6 [Pan troglodytes]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|296199095|ref|XP_002746945.1| PREDICTED: DNA-binding protein RFX6 [Callithrix jacchus]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|73946275|ref|XP_541213.2| PREDICTED: DNA-binding protein RFX6 [Canis lupus familiaris]
Length = 922
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 118 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 177
Query: 148 TR 149
TR
Sbjct: 178 TR 179
>gi|348538549|ref|XP_003456753.1| PREDICTED: DNA-binding protein RFX6-like [Oreochromis niloticus]
Length = 866
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 4/82 (4%)
Query: 72 PDNQASLSHVTKISPA----TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNA 127
P ++ ++S + K T+QWL +NY EGV LPR L+ HY+ C + KL+ A
Sbjct: 58 PSSRKTISQIIKDKKKQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACA 117
Query: 128 ASFGKLIRSVFIGLRTRRLGTR 149
A+FGK IR F L TRRLGTR
Sbjct: 118 ATFGKTIRQKFPLLTTRRLGTR 139
>gi|291396853|ref|XP_002714818.1| PREDICTED: regulatory factor X, 6 [Oryctolagus cuniculus]
Length = 928
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|126310919|ref|XP_001379614.1| PREDICTED: DNA-binding protein RFX6 [Monodelphis domestica]
Length = 932
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|410959934|ref|XP_003986553.1| PREDICTED: DNA-binding protein RFX6 [Felis catus]
Length = 935
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 131 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 190
Query: 148 TR 149
TR
Sbjct: 191 TR 192
>gi|395534835|ref|XP_003769442.1| PREDICTED: DNA-binding protein RFX6 [Sarcophilus harrisii]
Length = 930
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 122 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 181
Query: 148 TR 149
TR
Sbjct: 182 TR 183
>gi|291386190|ref|XP_002710056.1| PREDICTED: regulatory factor X, 8 [Oryctolagus cuniculus]
Length = 602
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C +N + VN A+FGKL+R VF L TRRLGT
Sbjct: 26 IQWLVDNFCICEGYSVPRCLMYEIYVETCGQNAQNQVNPATFGKLVRFVFPDLGTRRLGT 85
Query: 149 RRGWRF 154
R R+
Sbjct: 86 RGSARY 91
>gi|395843242|ref|XP_003794404.1| PREDICTED: DNA-binding protein RFX8 [Otolemur garnettii]
Length = 533
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 32/66 (48%), Positives = 44/66 (66%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C +N + VN A+FGKL+R VF L TRRLGT
Sbjct: 23 IQWLVDNFCICEGYSVPRCLMYEIYVETCGQNAQNQVNPATFGKLVRLVFPDLGTRRLGT 82
Query: 149 RRGWRF 154
R R+
Sbjct: 83 RGSARY 88
>gi|327261660|ref|XP_003215647.1| PREDICTED: DNA-binding protein RFX6-like [Anolis carolinensis]
Length = 963
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/62 (54%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLG
Sbjct: 156 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLG 215
Query: 148 TR 149
TR
Sbjct: 216 TR 217
>gi|320162932|gb|EFW39831.1| regulatory factor X [Capsaspora owczarzaki ATCC 30864]
Length = 1185
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 43/65 (66%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
SPA + WL ++E A S+ R ++ Y HC ENKL +NAA+FGKLIR VF LRTR
Sbjct: 286 SPAALVWLTTHFEQASTGSVARGIIYASYEDHCRENKLARINAATFGKLIRQVFPKLRTR 345
Query: 145 RLGTR 149
RLG R
Sbjct: 346 RLGMR 350
>gi|26340118|dbj|BAC33722.1| unnamed protein product [Mus musculus]
gi|148673122|gb|EDL05069.1| regulatory factor X domain containing 1, isoform CRA_b [Mus
musculus]
Length = 524
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/99 (42%), Positives = 54/99 (54%), Gaps = 3/99 (3%)
Query: 54 DEPAQATTATSNTGDP-LSPDNQAS--LSHVTKISPATVQWLIDNYETAEGVSLPRSSLF 110
+E A + + DP LS + + K + T+QWL DNY EGV LPR L+
Sbjct: 86 EEDADTQESKTKAADPQLSQKKSITQMMKDKKKQTQLTLQWLEDNYIVCEGVCLPRCILY 145
Query: 111 NHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
HY+ C + KL+ AA+FGK IR F L TRRLGTR
Sbjct: 146 AHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTR 184
>gi|348588020|ref|XP_003479765.1| PREDICTED: DNA-binding protein RFX6-like [Cavia porcellus]
Length = 926
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 41/62 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + +L+ AA+FGK IR F L TRRLG
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKERLEPACAATFGKTIRQKFPLLTTRRLG 183
Query: 148 TR 149
TR
Sbjct: 184 TR 185
>gi|296212782|ref|XP_002752988.1| PREDICTED: transcription factor RFX4-like [Callithrix jacchus]
Length = 77
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%), Gaps = 9/81 (11%)
Query: 52 IVDEPAQATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFN 111
+++EP +T D +N+AS H T PAT+QWL +NYE AEGV +PRS+L+
Sbjct: 5 LLEEPDMDST------DEEKENNRASKPHST---PATLQWLEENYEIAEGVCIPRSALYM 55
Query: 112 HYIRHCAENKLDAVNAASFGK 132
HY+ C +N VNAASFGK
Sbjct: 56 HYLDFCEKNDTQPVNAASFGK 76
>gi|149038660|gb|EDL92949.1| regulatory factor X domain containing 1 (predicted), isoform CRA_b
[Rattus norvegicus]
Length = 520
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/67 (53%), Positives = 43/67 (64%)
Query: 83 KISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLR 142
K + T+QWL DNY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L
Sbjct: 114 KQTQLTLQWLEDNYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLT 173
Query: 143 TRRLGTR 149
TRRLGTR
Sbjct: 174 TRRLGTR 180
>gi|443683724|gb|ELT87881.1| hypothetical protein CAPTEDRAFT_108705, partial [Capitella teleta]
Length = 404
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 40/58 (68%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NYE AEGV LPR L+ HY C + K +AV AA+FGKL+R F + TRRLGTR
Sbjct: 1 LDENYERAEGVCLPRCILYTHYQEFCKKEKFEAVGAATFGKLLRQRFPRVTTRRLGTR 58
>gi|354475283|ref|XP_003499859.1| PREDICTED: DNA-binding protein RFX8, partial [Cricetulus griseus]
Length = 588
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C ++ + VN A+FGKL+R VF L TRRLGT
Sbjct: 11 IQWLVDNFCVCEGFSVPRCLMYEIYVETCGQSAQNQVNPATFGKLVRLVFPDLGTRRLGT 70
Query: 149 RRGWRF 154
R R+
Sbjct: 71 RGSARY 76
>gi|410916129|ref|XP_003971539.1| PREDICTED: DNA-binding protein RFX6-like [Takifugu rubripes]
Length = 944
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR L+ HY+ C + L+ AA+FGK IR F L TRRLG
Sbjct: 97 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKENLEPACAATFGKTIRQKFPLLTTRRLG 156
Query: 148 TR 149
TR
Sbjct: 157 TR 158
>gi|224586779|ref|NP_001139132.1| DNA-binding protein RFX8 [Mus musculus]
gi|300681095|sp|D3YU81.1|RFX8_MOUSE RecName: Full=DNA-binding protein RFX8; AltName: Full=Regulatory
factor X 8
Length = 596
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C ++ + VN A+FGKL+R VF L TRRLGT
Sbjct: 20 IQWLVDNFCICEGFSVPRCLMYEIYVETCGQSAQNQVNPATFGKLVRLVFPDLGTRRLGT 79
Query: 149 RRGWRF 154
R R+
Sbjct: 80 RGSARY 85
>gi|392350730|ref|XP_576547.4| PREDICTED: DNA-binding protein RFX8 [Rattus norvegicus]
Length = 581
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C ++ + VN A+FGKL+R VF L TRRLGT
Sbjct: 20 IQWLVDNFCICEGFSVPRCLMYEIYVETCGQSAQNQVNPATFGKLVRLVFPDLGTRRLGT 79
Query: 149 RRGWRF 154
R R+
Sbjct: 80 RGSARY 85
>gi|109487021|ref|XP_001058869.1| PREDICTED: DNA-binding protein RFX8 [Rattus norvegicus]
Length = 597
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 44/66 (66%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C ++ + VN A+FGKL+R VF L TRRLGT
Sbjct: 20 IQWLVDNFCICEGFSVPRCLMYEIYVETCGQSAQNQVNPATFGKLVRLVFPDLGTRRLGT 79
Query: 149 RRGWRF 154
R R+
Sbjct: 80 RGSARY 85
>gi|443690128|gb|ELT92343.1| hypothetical protein CAPTEDRAFT_220726 [Capitella teleta]
Length = 816
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 42/62 (67%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+QWL +NY EGV LPR+ ++NHY+ C + L+ AA+FGK IR + + TRRLG
Sbjct: 69 TLQWLEENYCNCEGVCLPRNVVYNHYLDFCRQESLEPACAATFGKTIRQKYPHVTTRRLG 128
Query: 148 TR 149
TR
Sbjct: 129 TR 130
>gi|391326611|ref|XP_003737806.1| PREDICTED: transcription factor RFX4-like [Metaseiulus
occidentalis]
Length = 597
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/56 (57%), Positives = 41/56 (73%)
Query: 99 AEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
AEGV +PR++L+ HY+ CA+N + VNAASFGK+IR F L TRRLGTR R+
Sbjct: 2 AEGVCIPRNTLYLHYVDFCAKNSMQPVNAASFGKIIRQQFPALTTRRLGTRGQSRY 57
>gi|172046177|sp|Q6ZV50.2|RFX8_HUMAN RecName: Full=DNA-binding protein RFX8; AltName: Full=Regulatory
factor X 8
Length = 586
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 43/68 (63%)
Query: 87 ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
+QWL+DN+ E S+PR ++ Y+ C +N + VN A+FGKL+R VF L TRRL
Sbjct: 21 GVIQWLVDNFCICEECSVPRCLMYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTRRL 80
Query: 147 GTRRGWRF 154
GTR R+
Sbjct: 81 GTRGSARY 88
>gi|344284027|ref|XP_003413772.1| PREDICTED: DNA-binding protein RFX8 [Loxodonta africana]
Length = 589
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/86 (41%), Positives = 49/86 (56%), Gaps = 3/86 (3%)
Query: 69 PLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
P SP S + A +QWL+DN+ EG S+PR ++ Y+ C +N + VN A
Sbjct: 6 PASPSGGESRQ---GLHSAIMQWLLDNFCICEGYSVPRCLIYEIYMETCGQNPQNQVNPA 62
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRF 154
+FGKL+ VF L TRRLGTR R+
Sbjct: 63 TFGKLVHLVFPDLGTRRLGTRGSARY 88
>gi|363729019|ref|XP_416912.3| PREDICTED: DNA-binding protein RFX8-like [Gallus gallus]
Length = 350
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 44/65 (67%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+W+ DN+ EG ++PR L+ Y+ + + N D VN+A+FGKLIR VF GL TRRLGTR
Sbjct: 16 RWIADNFYLCEGCTIPRWLLYEMYMENFSSNDNDKVNSATFGKLIRLVFPGLGTRRLGTR 75
Query: 150 RGWRF 154
R+
Sbjct: 76 GSARY 80
>gi|344253235|gb|EGW09339.1| Transcription factor RFX4 [Cricetulus griseus]
Length = 659
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 41/60 (68%), Gaps = 3/60 (5%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+AS H T PAT+QWL +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK
Sbjct: 39 RASKPHST---PATLQWLEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKCF 95
>gi|359069928|ref|XP_003586661.1| PREDICTED: DNA-binding protein RFX8-like [Bos taurus]
Length = 592
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C +N + VN A FGKL+ VF L TRRLGT
Sbjct: 23 IQWLVDNFCICEGYSVPRCLMYEIYMETCGQNAQNQVNPAMFGKLVHLVFPDLGTRRLGT 82
Query: 149 RRGWRF 154
R R+
Sbjct: 83 RGSARY 88
>gi|358414330|ref|XP_003582808.1| PREDICTED: DNA-binding protein RFX8-like [Bos taurus]
Length = 592
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C +N + VN A FGKL+ VF L TRRLGT
Sbjct: 23 IQWLVDNFCICEGYSVPRCLMYEIYMETCGQNAQNQVNPAMFGKLVHLVFPDLGTRRLGT 82
Query: 149 RRGWRF 154
R R+
Sbjct: 83 RGSARY 88
>gi|432951122|ref|XP_004084732.1| PREDICTED: DNA-binding protein RFX6-like [Oryzias latipes]
Length = 709
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 39 SRDSPHENTEVAYIVDEPAQATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYET 98
S D+P E +P + N G +Q + + K T+QWL +NY
Sbjct: 57 SNDTPSSEEE-----QDPDLTSDLKQNVGSSRKTVSQL-IKNKKKQMQLTLQWLEENYMV 110
Query: 99 AEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
EGV LPR L+ HY+ C + +L+ AA+FGK IR F L TRRLGTR
Sbjct: 111 CEGVCLPRCILYAHYLDFCRKERLEPACAATFGKTIRQKFPLLTTRRLGTR 161
>gi|301767612|ref|XP_002919234.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
FLJ42986-like [Ailuropoda melanoleuca]
Length = 586
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 31/66 (46%), Positives = 42/66 (63%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR ++ Y+ C +N VN A+FGKL+ VF L TRRLGT
Sbjct: 23 IQWLVDNFCICEGYSVPRCLIYEIYVETCGQNAQQQVNPATFGKLVHLVFPDLGTRRLGT 82
Query: 149 RRGWRF 154
R R+
Sbjct: 83 RGSARY 88
>gi|156379617|ref|XP_001631553.1| predicted protein [Nematostella vectensis]
gi|156218595|gb|EDO39490.1| predicted protein [Nematostella vectensis]
Length = 396
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/58 (51%), Positives = 39/58 (67%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NYE EG+ LPR ++ HY+ C +NKL+ A+FGK+IR F L TRRLGTR
Sbjct: 1 LGENYELKEGMCLPRCVMYTHYLDFCKKNKLNPAGPATFGKIIRQKFPKLTTRRLGTR 58
>gi|297666924|ref|XP_002811751.1| PREDICTED: DNA-binding protein RFX8 isoform 2 [Pongo abelii]
Length = 586
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 43/66 (65%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ +G SLPR ++ Y+ C +N + VN A+FGKL+R V + L T RLGT
Sbjct: 23 IQWLVDNFCICKGCSLPRCLMYEIYVETCGQNTENQVNPATFGKLVRLVLLDLGTWRLGT 82
Query: 149 RRGWRF 154
R R+
Sbjct: 83 RGSARY 88
>gi|390359356|ref|XP_003729465.1| PREDICTED: DNA-binding protein RFX6-like [Strongylocentrotus
purpuratus]
Length = 756
Score = 69.3 bits (168), Expect = 5e-10, Method: Composition-based stats.
Identities = 31/62 (50%), Positives = 43/62 (69%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T++WL DNYE ++GV +PR L+ HY+ C ++ +AA+FGK+IR F L TRRLG
Sbjct: 71 TLKWLSDNYERSDGVCVPRCVLYTHYLDFCKKHDFSPSSAATFGKVIRQKFPKLTTRRLG 130
Query: 148 TR 149
TR
Sbjct: 131 TR 132
>gi|301617833|ref|XP_002938344.1| PREDICTED: DNA-binding protein RFX6-like [Xenopus (Silurana)
tropicalis]
Length = 925
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 43/67 (64%)
Query: 83 KISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLR 142
K + T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L
Sbjct: 119 KQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLT 178
Query: 143 TRRLGTR 149
TRRLGTR
Sbjct: 179 TRRLGTR 185
>gi|320461684|ref|NP_001189351.1| regulatory factor X, 6 [Xenopus laevis]
gi|318069010|gb|ADV37424.1| Rfx6 [Xenopus laevis]
Length = 926
Score = 68.6 bits (166), Expect = 9e-10, Method: Composition-based stats.
Identities = 35/67 (52%), Positives = 43/67 (64%)
Query: 83 KISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLR 142
K + T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L
Sbjct: 119 KQTQLTLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLT 178
Query: 143 TRRLGTR 149
TRRLGTR
Sbjct: 179 TRRLGTR 185
>gi|167518113|ref|XP_001743397.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778496|gb|EDQ92111.1| predicted protein [Monosiga brevicollis MX1]
Length = 994
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 72/145 (49%), Gaps = 18/145 (12%)
Query: 12 IGNVNGTYLIQQTVEPTEHATIIATTASRDSPHENT-------EVAYIVDEPAQATTATS 64
+ N +G + Q VE HA PH++T + I P ++ +
Sbjct: 319 LDNPSGGVTVVQPVERLIHANTPV------HPHQHTPKDSHAPHIRSISPLPPSTSSESQ 372
Query: 65 NTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDA 124
+ P SP + S VTK +P V W+ ++YE E + RSSL+ +Y++ C +
Sbjct: 373 RSPSP-SPKKRGS---VTK-APDIVAWIHEHYELKEAACVLRSSLYENYVKFCELTSQEP 427
Query: 125 VNAASFGKLIRSVFIGLRTRRLGTR 149
NAA+FGK+IR F L+TRRLGTR
Sbjct: 428 TNAANFGKIIRQQFPQLKTRRLGTR 452
>gi|338713868|ref|XP_003362970.1| PREDICTED: DNA-binding protein RFX8 [Equus caballus]
Length = 590
Score = 68.2 bits (165), Expect = 1e-09, Method: Composition-based stats.
Identities = 31/74 (41%), Positives = 46/74 (62%)
Query: 81 VTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIG 140
+TK+ A WL+DN+ +G S+PR ++ Y+ C ++ + V A+FGKL+R VF
Sbjct: 20 ITKLREAPKDWLVDNFCICKGYSVPRCLMYEIYMETCGQSAQNQVKPATFGKLVRLVFPD 79
Query: 141 LRTRRLGTRRGWRF 154
L TRRLGTR R+
Sbjct: 80 LGTRRLGTRGSARY 93
>gi|350582070|ref|XP_003124920.3| PREDICTED: DNA-binding protein RFX8 [Sus scrofa]
Length = 579
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 42/66 (63%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+QWL+DN+ EG S+PR L+ Y+ C + + VN A+FGKL+ VF L +RRLGT
Sbjct: 21 IQWLVDNFCICEGYSVPRCLLYEIYMETCGHSAPNQVNPATFGKLVHLVFPDLASRRLGT 80
Query: 149 RRGWRF 154
R R+
Sbjct: 81 RGSARY 86
>gi|47222712|emb|CAG00146.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1034
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 43/74 (58%), Gaps = 7/74 (9%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFG-------KLIRSVFIG 140
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FG + IR F
Sbjct: 101 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGEAEQMSPQTIRQKFPL 160
Query: 141 LRTRRLGTRRGWRF 154
L TRRLGTR +F
Sbjct: 161 LTTRRLGTRGHSKF 174
>gi|198427446|ref|XP_002131036.1| PREDICTED: similar to regulatory factor X, 4 (influences HLA class
II expression) [Ciona intestinalis]
Length = 173
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 57/111 (51%), Gaps = 4/111 (3%)
Query: 44 HENTEVAYIVDEPAQATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVS 103
H NT V +V EPA ++S+ P+ S+ I T +WL N+E S
Sbjct: 35 HGNT-VGMLVSEPATTYMSSSSREMPIHMRYPVPCSNEATI---TTEWLTKNFEENSLTS 90
Query: 104 LPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
+PRS +F+ Y + C ++ N A FGK++R+ F L TRRLG R R+
Sbjct: 91 VPRSIMFDEYQKFCRDSNTKPFNQAVFGKIVRACFPNLTTRRLGVRGQSRY 141
>gi|402891753|ref|XP_003909104.1| PREDICTED: DNA-binding protein RFX8-like [Papio anubis]
Length = 176
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
L+DN+ EG S+PR ++ Y+ C +N + VN A+FGKL+R VF L TRRLGTR
Sbjct: 5 LVDNFCICEGCSVPRCLMYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTRRLGTRGS 64
Query: 152 WRF 154
R+
Sbjct: 65 ARY 67
>gi|392578393|gb|EIW71521.1| hypothetical protein TREMEDRAFT_60446 [Tremella mesenterica DSM
1558]
Length = 984
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+WL +Y TA G ++PR L++ Y C E L +N+ASFGK +RS F G++TRRLG R
Sbjct: 378 RWLNLSYTTAAGYTVPRQGLYHSYTVSCDEYGLKPINSASFGKAVRSAFAGIKTRRLGVR 437
>gi|440804467|gb|ELR25344.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1007
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 40/66 (60%), Gaps = 2/66 (3%)
Query: 86 PATVQWLIDNYETAEGVS--LPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRT 143
P V W+ NYE + S LP+ ++ HY C E + N A+FGK++RSVF L+T
Sbjct: 693 PVVVHWIKKNYELSADSSSDLPKEQVYRHYREFCEETGVQQTNCATFGKILRSVFPNLKT 752
Query: 144 RRLGTR 149
RRLG+R
Sbjct: 753 RRLGSR 758
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 3/68 (4%)
Query: 85 SPATVQW--LIDNYETAEGV-SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGL 141
+PA + W L+ NY EG SLP++ ++ Y+ +C E L+ +FGK++R F +
Sbjct: 28 TPAVIAWYELLTNYALREGAPSLPKAQVYQEYVAYCGEAGLEPTTPPAFGKILRVAFPSI 87
Query: 142 RTRRLGTR 149
RR G R
Sbjct: 88 ECRRKGPR 95
>gi|397489657|ref|XP_003815840.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX8 [Pan
paniscus]
Length = 651
Score = 67.0 bits (162), Expect = 3e-09, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 87 ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
+QWL+DN+ E S+PR ++ Y+ C +N + VN A+FGKL+R VF L T RL
Sbjct: 86 GVIQWLVDNFCICEECSVPRCLMYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTWRL 145
Query: 147 GTRRGWRF 154
GTR R+
Sbjct: 146 GTRGSARY 153
>gi|195996205|ref|XP_002107971.1| hypothetical protein TRIADDRAFT_51992 [Trichoplax adhaerens]
gi|190588747|gb|EDV28769.1| hypothetical protein TRIADDRAFT_51992 [Trichoplax adhaerens]
Length = 338
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 30/55 (54%), Positives = 41/55 (74%)
Query: 95 NYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
NYE AEGV +PRS L+++Y ++C E + AVNAA+FGK++R F + TRRLG R
Sbjct: 30 NYEEAEGVCIPRSFLYSNYTQYCQEANIHAVNAANFGKILRQEFPKVLTRRLGHR 84
>gi|334347011|ref|XP_003341879.1| PREDICTED: DNA-binding protein RFX8 [Monodelphis domestica]
Length = 569
Score = 66.6 bits (161), Expect = 4e-09, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
L+DN+ EG S+PR ++ Y+ C +N + VN A+FGKL+R VF L TRRLGTR
Sbjct: 9 LVDNFCICEGYSVPRCLMYEIYVETCGQNAQNQVNPATFGKLVRLVFPDLGTRRLGTRGS 68
Query: 152 WRF 154
R+
Sbjct: 69 ARY 71
>gi|156403075|ref|XP_001639915.1| predicted protein [Nematostella vectensis]
gi|156227046|gb|EDO47852.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 38/58 (65%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NY EGV LPR L+ HY+ C +K++A AA+FGK IR F L TRRLGTR
Sbjct: 1 LDENYVMCEGVCLPRCILYAHYLDFCRRHKIEAACAATFGKTIRQKFPQLTTRRLGTR 58
>gi|440799843|gb|ELR20886.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 718
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 28/64 (43%), Positives = 41/64 (64%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P +QW+ +NYE + +P+ ++ HY C +N + N A+FGK+IRSVF L+TRR
Sbjct: 59 PLVIQWIKENYEASGNSCIPKHLVYQHYKDFCEDNNIQFTNMANFGKIIRSVFPRLKTRR 118
Query: 146 LGTR 149
LG R
Sbjct: 119 LGPR 122
>gi|351695487|gb|EHA98405.1| DNA-binding protein RFX6, partial [Heterocephalus glaber]
Length = 800
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 37/58 (63%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NY EGV LPR L+ HY+ C + KL+ AA+FGK IR F L TRRLGTR
Sbjct: 1 LEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKTIRQKFPLLTTRRLGTR 58
>gi|195451141|ref|XP_002072785.1| GK13786 [Drosophila willistoni]
gi|194168870|gb|EDW83771.1| GK13786 [Drosophila willistoni]
Length = 1388
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 27/79 (34%), Positives = 47/79 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 324 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 383
Query: 148 TRRGWRFLSSSQSALTRVI 166
TR R+ ++ T++I
Sbjct: 384 TRGNSRYCYAAMRKTTKLI 402
>gi|431895591|gb|ELK05024.1| hypothetical protein PAL_GLEAN10005831 [Pteropus alecto]
Length = 566
Score = 65.9 bits (159), Expect = 6e-09, Method: Composition-based stats.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
L+DN+ EG S+PR ++ Y+ C +N + VN A+FGKL+R VF L TRRLGTR
Sbjct: 73 LVDNFCICEGYSVPRCLMYEIYVETCGQNAQNQVNPATFGKLVRLVFPDLGTRRLGTRGS 132
Query: 152 WRF 154
R+
Sbjct: 133 ARY 135
>gi|410035506|ref|XP_003949920.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX8 [Pan
troglodytes]
Length = 584
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 87 ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
+QWL+DN+ E +PR ++ Y+ C +N + VN A+FGKL+R VF L T RL
Sbjct: 21 GVIQWLVDNFCICEECGVPRCLMYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTWRL 80
Query: 147 GTRRGWRF 154
GTR R+
Sbjct: 81 GTRGSARY 88
>gi|401885908|gb|EJT49987.1| hypothetical protein A1Q1_00828 [Trichosporon asahii var. asahii
CBS 2479]
Length = 988
Score = 65.5 bits (158), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 80 HVTKISP-----ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
V ++SP A W Y G ++PR L++ Y C + L +N+ASFGK++
Sbjct: 356 QVRRLSPCQHGKARAFWAKRCYTPVNGFTVPRQGLYHSYTMSCKDFGLRPINSASFGKVV 415
Query: 135 RSVFIGLRTRRLGTRRGWRF 154
RS F+G+RTRRLG R ++
Sbjct: 416 RSTFLGIRTRRLGVRGNSKY 435
>gi|406697417|gb|EKD00677.1| hypothetical protein A1Q2_05037 [Trichosporon asahii var. asahii
CBS 8904]
Length = 964
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 30/80 (37%), Positives = 45/80 (56%), Gaps = 5/80 (6%)
Query: 80 HVTKISP-----ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
V ++SP A W Y G ++PR L++ Y C + L +N+ASFGK++
Sbjct: 332 QVRRLSPCQHGKARAFWAKRCYTPVNGFTVPRQGLYHSYTMSCKDFGLRPINSASFGKVV 391
Query: 135 RSVFIGLRTRRLGTRRGWRF 154
RS F+G+RTRRLG R ++
Sbjct: 392 RSTFLGIRTRRLGVRGNSKY 411
>gi|260823478|ref|XP_002604210.1| hypothetical protein BRAFLDRAFT_73451 [Branchiostoma floridae]
gi|229289535|gb|EEN60221.1| hypothetical protein BRAFLDRAFT_73451 [Branchiostoma floridae]
Length = 153
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
L +NY EGV LPR L+ HY+ C KL+ AA+FGK IR F L TRRLGTR
Sbjct: 47 LEENYIMCEGVCLPRCILYAHYLDFCRREKLEPACAATFGKTIRQKFPHLTTRRLGTRGH 106
Query: 152 WRFLSS---SQSALTRVIAL 168
+F + ++ TR +L
Sbjct: 107 SKFSGARLKNEGGFTRKYSL 126
>gi|195038619|ref|XP_001990754.1| GH18082 [Drosophila grimshawi]
gi|193894950|gb|EDV93816.1| GH18082 [Drosophila grimshawi]
Length = 1387
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 47/80 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 310 TINWVRSHLEHDAQVSIPKQDVYNDYIVYCERLNIKPLSTADFGKVMKQVFPGVRPRRLG 369
Query: 148 TRRGWRFLSSSQSALTRVIA 167
TR R+ ++ T++ A
Sbjct: 370 TRGNSRYCYAAMRKTTKLTA 389
>gi|195152157|ref|XP_002017003.1| GL22063 [Drosophila persimilis]
gi|194112060|gb|EDW34103.1| GL22063 [Drosophila persimilis]
Length = 1380
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 305 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 364
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 365 TRGNSRYCYAAMRKTTKL 382
>gi|194744279|ref|XP_001954622.1| GF16654 [Drosophila ananassae]
gi|190627659|gb|EDV43183.1| GF16654 [Drosophila ananassae]
Length = 1327
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 317 TINWVRSHLEHDAKVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 376
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 377 TRGNSRYCYAAMRKTTKL 394
>gi|198453554|ref|XP_001359237.2| GA21990 [Drosophila pseudoobscura pseudoobscura]
gi|198132408|gb|EAL28382.2| GA21990 [Drosophila pseudoobscura pseudoobscura]
Length = 1344
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 305 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 364
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 365 TRGNSRYCYAAMRKTTKL 382
>gi|442617759|ref|NP_001262317.1| CG9727, isoform B [Drosophila melanogaster]
gi|440217132|gb|AGB95700.1| CG9727, isoform B [Drosophila melanogaster]
Length = 1329
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 310 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 369
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 370 TRGNSRYCYAAMRKTTKL 387
>gi|195343983|ref|XP_002038570.1| GM10553 [Drosophila sechellia]
gi|194133591|gb|EDW55107.1| GM10553 [Drosophila sechellia]
Length = 1280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 310 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 369
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 370 TRGNSRYCYAAMRKTTKL 387
>gi|24644617|ref|NP_649656.1| CG9727, isoform A [Drosophila melanogaster]
gi|442617761|ref|NP_001262318.1| CG9727, isoform C [Drosophila melanogaster]
gi|10727126|gb|AAF54121.2| CG9727, isoform A [Drosophila melanogaster]
gi|51092155|gb|AAT94491.1| LD40317p [Drosophila melanogaster]
gi|220943436|gb|ACL84261.1| CG9727-PA [synthetic construct]
gi|440217133|gb|AGB95701.1| CG9727, isoform C [Drosophila melanogaster]
Length = 1280
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 310 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 369
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 370 TRGNSRYCYAAMRKTTKL 387
>gi|195109963|ref|XP_001999551.1| GI24583 [Drosophila mojavensis]
gi|193916145|gb|EDW15012.1| GI24583 [Drosophila mojavensis]
Length = 1378
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 316 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 375
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 376 TRGNSRYCYAAMRKTTKL 393
>gi|195568743|ref|XP_002102373.1| GD19544 [Drosophila simulans]
gi|194198300|gb|EDX11876.1| GD19544 [Drosophila simulans]
Length = 1272
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 310 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 369
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 370 TRGNSRYCYAAMRKTTKL 387
>gi|357609940|gb|EHJ66752.1| hypothetical protein KGM_16732 [Danaus plexippus]
Length = 1343
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
TV W+ + E VSLP+ +++ YI HC + + ++ A FGK+++ V+ +R RRLG
Sbjct: 151 TVTWIQTHLEVDPDVSLPKQDVYDEYIAHCMTSNMKPLSTADFGKVMKQVYPSVRPRRLG 210
Query: 148 TRRGWRF 154
TR R+
Sbjct: 211 TRGNSRY 217
>gi|195502302|ref|XP_002098163.1| GE24099 [Drosophila yakuba]
gi|194184264|gb|EDW97875.1| GE24099 [Drosophila yakuba]
Length = 1281
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 311 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 370
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 371 TRGNSRYCYAAMRKTTKL 388
>gi|195392154|ref|XP_002054724.1| GJ22650 [Drosophila virilis]
gi|194152810|gb|EDW68244.1| GJ22650 [Drosophila virilis]
Length = 1344
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 317 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 376
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 377 TRGNSRYCYAAMRKTTKL 394
>gi|194899061|ref|XP_001979081.1| GG10435 [Drosophila erecta]
gi|190650784|gb|EDV48039.1| GG10435 [Drosophila erecta]
Length = 1278
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++N YI +C + ++ A FGK+++ VF G+R RRLG
Sbjct: 308 TINWVRSHLEHDAQVSIPKQDVYNDYIAYCERLSIKPLSTADFGKVMKQVFPGVRPRRLG 367
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 368 TRGNSRYCYAAMRKTTKL 385
>gi|403217427|emb|CCK71921.1| hypothetical protein KNAG_0I01300 [Kazachstania naganishii CBS
8797]
Length = 806
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 40/64 (62%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N E+ +PR +F Y C++N+L ++ AS GKLIR+VF L TRRLGTR
Sbjct: 319 WLMKNCESKHDSYVPRGRIFAQYASSCSQNELKPLSQASLGKLIRTVFPDLTTRRLGTRG 378
Query: 151 GWRF 154
++
Sbjct: 379 QSKY 382
>gi|326437514|gb|EGD83084.1| hypothetical protein PTSG_12063 [Salpingoeca sp. ATCC 50818]
Length = 942
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 47/90 (52%), Gaps = 7/90 (7%)
Query: 83 KISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLR 142
+I TV WL N+E G ++ R ++ Y RH + NAA FGK+IR VF G+
Sbjct: 290 RIDEDTVTWLRANFELKTGFTVERRLVYKAYCRHMQSMMQEPCNAAGFGKVIRGVFPGVT 349
Query: 143 TRRLGTR-------RGWRFLSSSQSALTRV 165
+RRLG+R G R SS A+ R+
Sbjct: 350 SRRLGSRGHSKYHYEGLRIKPSSAVAMLRL 379
>gi|426226500|ref|XP_004007381.1| PREDICTED: DNA-binding protein RFX8 [Ovis aries]
Length = 580
Score = 63.2 bits (152), Expect = 3e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 40/63 (63%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
L+DN+ EG S+PR ++ Y+ C +N + VN A+FGKL+ VF L TRRLGTR
Sbjct: 6 LVDNFCICEGYSVPRCLMYEIYVETCRQNAQNQVNPATFGKLVHLVFPDLGTRRLGTRGS 65
Query: 152 WRF 154
R+
Sbjct: 66 ARY 68
>gi|189239377|ref|XP_001812755.1| PREDICTED: similar to rfx5 [Tribolium castaneum]
Length = 1015
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 64 SNTGDPL-SPDNQ-ASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
SN DPL P N S S + + T+ W+ + E +SLP+ ++ Y +C +N+
Sbjct: 89 SNVVDPLRQPLNPLGSRSEINR----TISWIKTHLEEDAALSLPKQEVYEEYTVYCTQNQ 144
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRFLSSSQSALTRVIAL 168
+ +++ A FGK+++ V+ +R RRLGTR R+ S L R I L
Sbjct: 145 IKSLSQADFGKVMKQVYPKVRARRLGTRGNSRYC---YSGLRRCIKL 188
>gi|347968221|ref|XP_003436182.1| AGAP013226-PA [Anopheles gambiae str. PEST]
gi|333468106|gb|EGK96831.1| AGAP013226-PA [Anopheles gambiae str. PEST]
Length = 1519
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ +++ Y+ +CA + ++ A FGK+++ VF G+R RRLG
Sbjct: 274 TINWVRSHLEHDPNVSIPKQEVYDDYVAYCARINIKPLSTADFGKVMKQVFPGIRPRRLG 333
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 334 TRGHSRYCYAAMRKATKL 351
>gi|270009668|gb|EFA06116.1| hypothetical protein TcasGA2_TC008959 [Tribolium castaneum]
Length = 1009
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 58/107 (54%), Gaps = 9/107 (8%)
Query: 64 SNTGDPL-SPDNQ-ASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENK 121
SN DPL P N S S + + T+ W+ + E +SLP+ ++ Y +C +N+
Sbjct: 90 SNVVDPLRQPLNPLGSRSEINR----TISWIKTHLEEDAALSLPKQEVYEEYTVYCTQNQ 145
Query: 122 LDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRFLSSSQSALTRVIAL 168
+ +++ A FGK+++ V+ +R RRLGTR R+ S L R I L
Sbjct: 146 IKSLSQADFGKVMKQVYPKVRARRLGTRGNSRYC---YSGLRRCIKL 189
>gi|440908849|gb|ELR58828.1| DNA-binding protein RFX8, partial [Bos grunniens mutus]
Length = 560
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/63 (46%), Positives = 39/63 (61%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
L+DN+ EG S+PR ++ Y+ C +N + VN A FGKL+ VF L TRRLGTR
Sbjct: 1 LVDNFCICEGYSVPRCLMYEIYVETCGQNAQNQVNPAMFGKLVHLVFPDLGTRRLGTRGS 60
Query: 152 WRF 154
R+
Sbjct: 61 ARY 63
>gi|426354368|ref|XP_004044636.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX6 [Gorilla
gorilla gorilla]
Length = 934
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 39/66 (59%), Gaps = 2/66 (3%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR-- 145
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK R + L R
Sbjct: 124 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGKKYRCKYKLLSKXRKV 183
Query: 146 LGTRRG 151
LGT+ G
Sbjct: 184 LGTKAG 189
>gi|195995865|ref|XP_002107801.1| hypothetical protein TRIADDRAFT_51678 [Trichoplax adhaerens]
gi|190588577|gb|EDV28599.1| hypothetical protein TRIADDRAFT_51678 [Trichoplax adhaerens]
Length = 741
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 29/61 (47%), Positives = 37/61 (60%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
++WL +NY EGV +PR L+ HY+ C + A A+FGK IR F L TRRLGT
Sbjct: 22 IKWLDENYTVNEGVCMPRCILYGHYLEFCRARNVIAACPATFGKTIRQKFPNLTTRRLGT 81
Query: 149 R 149
R
Sbjct: 82 R 82
>gi|312376286|gb|EFR23420.1| hypothetical protein AND_12900 [Anopheles darlingi]
Length = 192
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 47/78 (60%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ +++ Y+ +CA + ++ A FGK+++ VF G+R RRLG
Sbjct: 90 TINWVRSHLEHDPNVSIPKQEVYDDYVAYCARINIKPLSTADFGKVMKQVFPGIRPRRLG 149
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ ++ T++
Sbjct: 150 TRGHSRYCYAAMRKATKL 167
>gi|260785956|ref|XP_002588025.1| hypothetical protein BRAFLDRAFT_83002 [Branchiostoma floridae]
gi|229273182|gb|EEN44036.1| hypothetical protein BRAFLDRAFT_83002 [Branchiostoma floridae]
Length = 957
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 38/65 (58%), Gaps = 4/65 (6%)
Query: 68 DPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNA 127
DP P + S ++ AT++WL +NYE AEGV LPR L+ HY+ C + K A
Sbjct: 14 DPAEPAPEIKQSQIS----ATLRWLTENYERAEGVCLPRCVLYTHYLDFCKKMKFTPAGA 69
Query: 128 ASFGK 132
ASFGK
Sbjct: 70 ASFGK 74
>gi|348571981|ref|XP_003471773.1| PREDICTED: DNA-binding protein RFX8-like [Cavia porcellus]
Length = 639
Score = 62.0 bits (149), Expect = 7e-08, Method: Composition-based stats.
Identities = 31/68 (45%), Positives = 40/68 (58%)
Query: 87 ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
AT L+DN+ EG SLPR ++ Y+ C N + VN A+FGKL+ F L TRRL
Sbjct: 83 ATFLMLVDNFCICEGHSLPRCLMYEIYMDTCGRNAQNQVNPATFGKLVHLAFPDLGTRRL 142
Query: 147 GTRRGWRF 154
GTR R+
Sbjct: 143 GTRGSARY 150
>gi|207343000|gb|EDZ70599.1| YLR176Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 380
Score = 62.0 bits (149), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 248 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMRG 307
Query: 151 GWRF 154
++
Sbjct: 308 QSKY 311
>gi|432094369|gb|ELK25946.1| Transcription factor RFX4 [Myotis davidii]
Length = 1502
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 35/69 (50%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 75 QASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
QA +T +SPA L +NYE AEGV +PRS+L+ HY+ C +N VNAASFGK
Sbjct: 186 QARTMLLTMVSPAPAG-LEENYEIAEGVCIPRSALYMHYLDFCEKNDTQPVNAASFGKDP 244
Query: 135 RSVFIGLRT 143
R GLRT
Sbjct: 245 RLYRNGLRT 253
>gi|406605126|emb|CCH43419.1| hypothetical protein BN7_2967 [Wickerhamomyces ciferrii]
Length = 821
Score = 61.2 bits (147), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ + E +PR+ ++ Y+ CA+N L ++ ASFGKL+R++F L TRRLG R
Sbjct: 259 WLLKSCEAKSSAVVPRNRVYARYVSICADNGLKPLSPASFGKLVRAIFPNLSTRRLGMR 317
>gi|405967266|gb|EKC32448.1| Transcription factor RFX4 [Crassostrea gigas]
Length = 503
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 40/69 (57%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P +W+ ++ SL R +F YI HC N + N A+FGK++RS+F ++TRR
Sbjct: 123 PVVTKWIKSHFVVQPNNSLSRGDIFQAYIVHCERNNITHCNPATFGKILRSIFPDVKTRR 182
Query: 146 LGTRRGWRF 154
+GTR R+
Sbjct: 183 IGTRGNSRY 191
>gi|354546127|emb|CCE42856.1| hypothetical protein CPAR2_204990 [Candida parapsilosis]
Length = 920
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/92 (32%), Positives = 54/92 (58%)
Query: 58 QATTATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHC 117
+ ++AT T PL+ + + T+ S + WL+ + E + +PR+ ++ Y++ C
Sbjct: 341 EGSSATFPTSSPLATTEKPQNTKETQRSVFGMVWLLTSCEVSPTAVIPRNRIYARYVQIC 400
Query: 118 AENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
A+N L ++ ASFGKL+R ++ + TRRLG R
Sbjct: 401 ADNSLSPLSPASFGKLVRILYPTITTRRLGMR 432
>gi|259148168|emb|CAY81415.1| Rfx1p [Saccharomyces cerevisiae EC1118]
gi|365764026|gb|EHN05551.1| Rfx1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 771
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 248 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMRG 307
Query: 151 GWRF 154
++
Sbjct: 308 QSKY 311
>gi|294659616|ref|XP_462015.2| DEHA2G10868p [Debaryomyces hansenii CBS767]
gi|199434102|emb|CAG90496.2| DEHA2G10868p [Debaryomyces hansenii CBS767]
Length = 809
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ E++ +PR+ ++ Y++ CA+N L ++ ASFGKL+R +F L TRRLG R
Sbjct: 262 WLLNSCESSATAVVPRNRIYARYVQICADNSLKPLSPASFGKLVRILFPNLTTRRLGMR 320
>gi|392297686|gb|EIW08785.1| Rfx1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 771
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 248 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMRG 307
Query: 151 GWRF 154
++
Sbjct: 308 QSKY 311
>gi|350398098|ref|XP_003485087.1| PREDICTED: hypothetical protein LOC100744194 [Bombus impatiens]
Length = 1239
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 173 TIMWIKTHLEEDPDVSLPKQEVYDEYNMYCMRNSMKPLSTADFGKVMKQVYPRVRPRRLG 232
Query: 148 TRRGWRF 154
TR R+
Sbjct: 233 TRGNSRY 239
>gi|322800911|gb|EFZ21743.1| hypothetical protein SINV_03788 [Solenopsis invicta]
Length = 1243
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 188 TIMWIKTHLEEDPDVSLPKQEVYDEYNMYCTRNSMKPLSTADFGKVMKQVYPRVRPRRLG 247
Query: 148 TRRGWRF 154
TR R+
Sbjct: 248 TRGNSRY 254
>gi|358057784|dbj|GAA96360.1| hypothetical protein E5Q_03025 [Mixia osmundae IAM 14324]
Length = 895
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 32 TIIATTASRDSPHE--NTEVAYIVDEPAQATT-ATSNTGDPLSPDNQASLSHVTKISPAT 88
T AT A+R P N+E A+I P++ A S P S N + A
Sbjct: 302 TKPATRANRPDPGLTINSERAFIQGAPSKLDRLAESVRASPNSTQNDRGRT-------AF 354
Query: 89 VQ-WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
VQ WL +Y T ++ R L+ Y+ C + AVN+ASFGK +R VF+ +RTRRLG
Sbjct: 355 VQAWLQQSYTTCTEGNVSRQGLYGSYLDTCESYGIKAVNSASFGKAVRHVFVNIRTRRLG 414
Query: 148 TRRGWRF 154
R ++
Sbjct: 415 VRGNSKY 421
>gi|358057783|dbj|GAA96359.1| hypothetical protein E5Q_03026 [Mixia osmundae IAM 14324]
Length = 894
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 63/127 (49%), Gaps = 11/127 (8%)
Query: 32 TIIATTASRDSPHE--NTEVAYIVDEPAQATT-ATSNTGDPLSPDNQASLSHVTKISPAT 88
T AT A+R P N+E A+I P++ A S P S N + A
Sbjct: 302 TKPATRANRPDPGLTINSERAFIQGAPSKLDRLAESVRASPNSTQNDRGRT-------AF 354
Query: 89 VQ-WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
VQ WL +Y T ++ R L+ Y+ C + AVN+ASFGK +R VF+ +RTRRLG
Sbjct: 355 VQAWLQQSYTTCTEGNVSRQGLYGSYLDTCESYGIKAVNSASFGKAVRHVFVNIRTRRLG 414
Query: 148 TRRGWRF 154
R ++
Sbjct: 415 VRGNSKY 421
>gi|340720807|ref|XP_003398821.1| PREDICTED: hypothetical protein LOC100643738 [Bombus terrestris]
Length = 1239
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 173 TIMWIKTHLEEDPDVSLPKQEVYDEYNMYCMRNSMKPLSTADFGKVMKQVYPRVRPRRLG 232
Query: 148 TRRGWRF 154
TR R+
Sbjct: 233 TRGNSRY 239
>gi|151941020|gb|EDN59400.1| conserved protein [Saccharomyces cerevisiae YJM789]
Length = 771
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 38/64 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 248 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMRG 307
Query: 151 GWRF 154
++
Sbjct: 308 QSKY 311
>gi|328793580|ref|XP_001120516.2| PREDICTED: hypothetical protein LOC724622 [Apis mellifera]
Length = 1149
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 117 TIMWIKTHLEEDPDVSLPKQEVYDEYNMYCMRNSMKPLSTADFGKVMKQVYPRVRPRRLG 176
Query: 148 TRRGWRF 154
TR R+
Sbjct: 177 TRGNSRY 183
>gi|383848107|ref|XP_003699693.1| PREDICTED: uncharacterized protein LOC100876563 [Megachile
rotundata]
Length = 1219
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 172 TIMWIKTHLEEDPDVSLPKQEVYDEYNMYCMRNSMKPLSTADFGKVMKQVYPRVRPRRLG 231
Query: 148 TRRGWRF 154
TR R+
Sbjct: 232 TRGNSRY 238
>gi|332027618|gb|EGI67688.1| DNA-binding protein RFX7 [Acromyrmex echinatior]
Length = 1223
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 178 TIMWIKTHLEEDPDVSLPKQEVYDEYNMYCIRNSMKPLSTADFGKVMKQVYPRVRPRRLG 237
Query: 148 TRRGWRF 154
TR R+
Sbjct: 238 TRGNSRY 244
>gi|367010874|ref|XP_003679938.1| hypothetical protein TDEL_0B05980 [Torulaspora delbrueckii]
gi|359747596|emb|CCE90727.1| hypothetical protein TDEL_0B05980 [Torulaspora delbrueckii]
Length = 648
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N + +PR +F Y CA+N L ++ AS GKLIRSVF L TRRLG R
Sbjct: 206 WLMKNCVSEPDSYVPRGRIFAQYAASCAQNSLKPLSQASLGKLIRSVFPHLTTRRLGMRG 265
Query: 151 GWRF 154
R+
Sbjct: 266 QSRY 269
>gi|367024739|ref|XP_003661654.1| hypothetical protein MYCTH_2301302 [Myceliophthora thermophila ATCC
42464]
gi|347008922|gb|AEO56409.1| hypothetical protein MYCTH_2301302 [Myceliophthora thermophila ATCC
42464]
Length = 834
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ T +G S+PR ++ HY CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 240 WINMVCSTGKG-SVPRGRVYAHYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 297
>gi|156839051|ref|XP_001643221.1| hypothetical protein Kpol_457p14 [Vanderwaltozyma polyspora DSM
70294]
gi|156113821|gb|EDO15363.1| hypothetical protein Kpol_457p14 [Vanderwaltozyma polyspora DSM
70294]
Length = 842
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ N +PR +F+ Y CA+N L ++ AS GK IRS+F L+TRRLG R
Sbjct: 282 WLMQNCTADSNSYVPRGRIFSQYATSCAKNSLKPLSQASLGKFIRSLFPNLKTRRLGMRG 341
Query: 151 GWRF 154
++
Sbjct: 342 KSKY 345
>gi|198416506|ref|XP_002122865.1| PREDICTED: similar to Regulatory factor X domain-containing protein
1 [Ciona intestinalis]
Length = 648
Score = 59.7 bits (143), Expect = 5e-07, Method: Composition-based stats.
Identities = 29/62 (46%), Positives = 39/62 (62%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ WL NY +GV L R L++HY+ C ++ ++ AA+FGK IR F L TRRLG
Sbjct: 111 TLDWLEKNYVICDGVCLARCILYSHYLDFCNKSNIEPACAATFGKTIRHKFPLLTTRRLG 170
Query: 148 TR 149
TR
Sbjct: 171 TR 172
>gi|440796190|gb|ELR17299.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 642
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 41/67 (61%)
Query: 83 KISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLR 142
K +P QWL + E EG ++P+ + HY+ C +N++ +++FGKL+ SVF +
Sbjct: 16 KAAPIIFQWLENAMEPREGATVPKREVHAHYVAFCKDNRIQPTTSSAFGKLLLSVFPHVS 75
Query: 143 TRRLGTR 149
+RR+G R
Sbjct: 76 SRRIGKR 82
>gi|170040376|ref|XP_001847977.1| rfx5 [Culex quinquefasciatus]
gi|167863935|gb|EDS27318.1| rfx5 [Culex quinquefasciatus]
Length = 286
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 45/80 (56%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ ++ YI C + ++ A FGK+++ VF G+R RRLG
Sbjct: 83 TINWVRSHLEHDPNVSIPKQEVYEDYIAFCERIDIKPLSTADFGKVMKQVFPGIRPRRLG 142
Query: 148 TRRGWRFLSSSQSALTRVIA 167
TR R+ ++ T++ A
Sbjct: 143 TRGHSRYCYAAMRKATKLAA 162
>gi|150866092|ref|XP_001385574.2| hypothetical protein PICST_78645 [Scheffersomyces stipitis CBS
6054]
gi|149387348|gb|ABN67545.2| DNA binding protein [Scheffersomyces stipitis CBS 6054]
Length = 875
Score = 59.3 bits (142), Expect = 5e-07, Method: Composition-based stats.
Identities = 36/102 (35%), Positives = 58/102 (56%), Gaps = 12/102 (11%)
Query: 54 DEPAQATTATSNTGDPLSPDNQASLSHVTKISPATVQ------WLIDNYETAEGVSLPRS 107
DEPA +S G P SP ++ SH + + + WL+++ E++ +PR+
Sbjct: 242 DEPA----PSSIQGQPTSP--RSVESHKVRENKERQRQLFGMVWLLNSCESSPTAVVPRN 295
Query: 108 SLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
++ Y++ CA+N L ++ ASFGKL+R +F L TRRLG R
Sbjct: 296 RIYARYVQVCADNSLTPLSPASFGKLVRILFPNLTTRRLGMR 337
>gi|444317651|ref|XP_004179483.1| hypothetical protein TBLA_0C01490 [Tetrapisispora blattae CBS 6284]
gi|387512524|emb|CCH59964.1| hypothetical protein TBLA_0C01490 [Tetrapisispora blattae CBS 6284]
Length = 862
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N + +PR +F Y CA N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 317 WLLQNCRSDSDSYVPRGRIFAQYASSCASNSLKPLSQASLGKLIRAVFPDLTTRRLGIR 375
>gi|344303809|gb|EGW34058.1| hypothetical protein SPAPADRAFT_70246 [Spathaspora passalidarum
NRRL Y-27907]
Length = 833
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ E + +PR+ ++ Y++ CA+N L ++ ASFGKL+R +F L TRRLG R
Sbjct: 246 WLLNSCEHSPTAVVPRNRIYARYVQVCADNSLSPLSPASFGKLVRILFPTLTTRRLGMR 304
>gi|307197642|gb|EFN78821.1| Regulatory factor X domain-containing protein 2 [Harpegnathos
saltator]
Length = 1296
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++ V+ +R RRLG
Sbjct: 193 TIMWIKTHLEEDPDVSLPKQEVYDEYNVYCIRNSMKPLSTADFGKVMKQVYPRVRPRRLG 252
Query: 148 TRRGWRF 154
TR R+
Sbjct: 253 TRGNSRY 259
>gi|440796299|gb|ELR17408.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 689
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ WL YE +G S+ R ++ Y C L+A AA FGKL+R VF + +RRLG
Sbjct: 9 TLAWLASTYEMFDGASVARRDVYGEYCDFCQRYSLNATTAAIFGKLVRMVFPAISSRRLG 68
Query: 148 TRRG 151
RRG
Sbjct: 69 -RRG 71
>gi|157137247|ref|XP_001663955.1| rfx5 [Aedes aegypti]
gi|108869758|gb|EAT33983.1| AAEL013752-PA [Aedes aegypti]
Length = 415
Score = 58.9 bits (141), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 45/80 (56%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E VS+P+ +++ Y C + ++ A FGK+++ VF G+R RRLG
Sbjct: 236 TINWVRSHLEHDPNVSIPKQEVYDDYTAFCERIDIKPLSTADFGKVMKQVFPGIRPRRLG 295
Query: 148 TRRGWRFLSSSQSALTRVIA 167
TR R+ ++ T++ A
Sbjct: 296 TRGHSRYCYAAMRKATKLAA 315
>gi|366992153|ref|XP_003675842.1| hypothetical protein NCAS_0C04880 [Naumovozyma castellii CBS 4309]
gi|342301707|emb|CCC69478.1| hypothetical protein NCAS_0C04880 [Naumovozyma castellii CBS 4309]
Length = 896
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N E+ +PR +F Y CA+N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 382 WLMKNCESKHDSFVPRGRIFAQYASSCAQNNLKPLSQASLGKLIRTVFPDLTTRRLGMR 440
>gi|440800627|gb|ELR21663.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 720
Score = 58.5 bits (140), Expect = 8e-07, Method: Composition-based stats.
Identities = 27/70 (38%), Positives = 39/70 (55%)
Query: 80 HVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFI 139
H + P WL DNYE GV + L+ Y+ C +N ++ N ++FGK+ + VF
Sbjct: 47 HKDEALPLIENWLKDNYERRTGVCTAKRGLYADYLSFCRDNCVETSNNSAFGKVFKKVFP 106
Query: 140 GLRTRRLGTR 149
G+ TRRLG R
Sbjct: 107 GVETRRLGKR 116
>gi|345560100|gb|EGX43228.1| hypothetical protein AOL_s00215g602 [Arthrobotrys oligospora ATCC
24927]
Length = 757
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%), Gaps = 3/55 (5%)
Query: 95 NYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
N ETA ++PR+ ++ HY+ C + ++ +N ASFGKL+R VF ++TRRLG R
Sbjct: 223 NEETA---AIPRNRVYTHYVTACGDARIKCLNPASFGKLVRIVFPDIKTRRLGIR 274
>gi|367037603|ref|XP_003649182.1| hypothetical protein THITE_2107553 [Thielavia terrestris NRRL 8126]
gi|346996443|gb|AEO62846.1| hypothetical protein THITE_2107553 [Thielavia terrestris NRRL 8126]
Length = 800
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ T G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 204 WINQTCSTGNG-SVPRGRVYANYASRCASERITVLNPASFGKLVRVLFPGLKTRRLGVR 261
>gi|406865846|gb|EKD18887.1| hypothetical protein MBM_03129 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 805
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ + +G S+PR ++ +Y+ CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 207 WINQVCDKGKG-SVPRGRVYANYVSRCATERVTVLNPASFGKLVRVLFPGLKTRRLGVR 264
>gi|254582807|ref|XP_002499135.1| ZYRO0E04642p [Zygosaccharomyces rouxii]
gi|186703749|emb|CAQ43439.1| RFX-like DNA-binding protein RFX1 [Zygosaccharomyces rouxii]
gi|238942709|emb|CAR30880.1| ZYRO0E04642p [Zygosaccharomyces rouxii]
Length = 807
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL+ + + +PR +F Y CA+N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 288 WLMKSCQAQPDSYVPRGRIFAQYAASCAQNGLKPLSQASLGKLIRAVFPDLTTRRLGMRG 347
Query: 151 GWRF 154
R+
Sbjct: 348 QSRY 351
>gi|440640457|gb|ELR10376.1| hypothetical protein GMDG_00789 [Geomyces destructans 20631-21]
Length = 816
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ + +G S+PR ++ +Y+ CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 216 WINQVCDKGKG-SVPRGRVYANYVSRCATERVTVLNPASFGKLVRVLFPGLKTRRLGVR 273
>gi|340959813|gb|EGS20994.1| putative specific transcriptional repressor protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 835
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ T +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 233 WISQVCSTGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 290
>gi|366999490|ref|XP_003684481.1| hypothetical protein TPHA_0B03750 [Tetrapisispora phaffii CBS 4417]
gi|357522777|emb|CCE62047.1| hypothetical protein TPHA_0B03750 [Tetrapisispora phaffii CBS 4417]
Length = 839
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 28/59 (47%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N + E +PR +F+ Y C N L ++ AS GKLIRSVF L+TRRLG R
Sbjct: 332 WLMQNCVSDETSFVPRGRIFSQYASSCVHNSLKPLSQASLGKLIRSVFPNLKTRRLGMR 390
>gi|410083108|ref|XP_003959132.1| hypothetical protein KAFR_0I02180 [Kazachstania africana CBS 2517]
gi|372465722|emb|CCF59997.1| hypothetical protein KAFR_0I02180 [Kazachstania africana CBS 2517]
Length = 668
Score = 57.8 bits (138), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N ++ +PR +F Y CA+N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 219 WLMKNCQSKHDSYVPRGRIFAQYAASCAQNSLKPLSQASLGKLIRTVFPDLTTRRLGMR 277
>gi|68485085|ref|XP_713532.1| hypothetical protein CaO19.11346 [Candida albicans SC5314]
gi|68485166|ref|XP_713492.1| hypothetical protein CaO19.3865 [Candida albicans SC5314]
gi|46434989|gb|EAK94381.1| hypothetical protein CaO19.3865 [Candida albicans SC5314]
gi|46435035|gb|EAK94426.1| hypothetical protein CaO19.11346 [Candida albicans SC5314]
Length = 851
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ + A +PR+ ++ Y++ CA+N L V+ ASFGKL++ ++ + TRRLG R
Sbjct: 285 WLLNSCDLAPTAVIPRNRIYARYVQVCADNNLAPVSPASFGKLVKILYPNITTRRLGMR 343
>gi|342881295|gb|EGU82211.1| hypothetical protein FOXB_07271 [Fusarium oxysporum Fo5176]
Length = 785
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ E +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 175 WIHGVCERGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 232
>gi|448527385|ref|XP_003869485.1| Rfx1 DNA binding protein [Candida orthopsilosis Co 90-125]
gi|380353838|emb|CCG23350.1| Rfx1 DNA binding protein [Candida orthopsilosis]
Length = 894
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 39/59 (66%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ + E + +PR+ ++ Y++ CA+N L ++ ASFGKL+R ++ + TRRLG R
Sbjct: 348 WLLTSCEVSPTAVIPRNRIYARYVQICADNSLSPLSPASFGKLVRILYPTITTRRLGMR 406
>gi|440804823|gb|ELR25689.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 242
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P WL+ ++ +G +P+ +F Y CAE+ ++ +ASFGK ++ +F G+ TRR
Sbjct: 15 PDIKNWLLSAFQEKKGCCVPKKDVFGAYADFCAEHHYESTTSASFGKFLKKIFPGVETRR 74
Query: 146 L 146
L
Sbjct: 75 L 75
>gi|238880044|gb|EEQ43682.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 849
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ + A +PR+ ++ Y++ CA+N L V+ ASFGKL++ ++ + TRRLG R
Sbjct: 283 WLLNSCDLAPTAVIPRNRIYARYVQVCADNNLAPVSPASFGKLVKILYPNITTRRLGMR 341
>gi|156065129|ref|XP_001598486.1| hypothetical protein SS1G_00575 [Sclerotinia sclerotiorum 1980]
gi|154691434|gb|EDN91172.1| hypothetical protein SS1G_00575 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 740
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y+ C K+ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 204 SVPRGRVYANYVSRCGTEKVTVLNPASFGKLVRVLFPGLKTRRLGMR 250
>gi|321455982|gb|EFX67100.1| hypothetical protein DAPPUDRAFT_64123 [Daphnia pulex]
Length = 251
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 41/70 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
TV W+ + E VSLP+ ++ Y +C EN + ++ A FGK+++ VF +R RRLG
Sbjct: 56 TVVWIQTHLEEDVEVSLPKQEVYEEYGGYCTENVIKPLSTADFGKVMKQVFPNVRPRRLG 115
Query: 148 TRRGWRFLSS 157
TR R+ S
Sbjct: 116 TRGHSRYCYS 125
>gi|241958840|ref|XP_002422139.1| RFX-like DNA-binding protein, putative [Candida dubliniensis CD36]
gi|223645484|emb|CAX40141.1| RFX-like DNA-binding protein, putative [Candida dubliniensis CD36]
Length = 853
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ + A +PR+ ++ Y++ CA+N L V+ ASFGKL++ ++ + TRRLG R
Sbjct: 290 WLLNSCDLAPTAVIPRNRIYARYVQVCADNSLAPVSPASFGKLVKILYPNITTRRLGMR 348
>gi|347829210|emb|CCD44907.1| similar to transcription factor RfxA [Botryotinia fuckeliana]
Length = 796
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y+ C K+ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 204 SVPRGRVYANYVSRCGTEKVTVLNPASFGKLVRVLFPGLKTRRLGVR 250
>gi|410730529|ref|XP_003980085.1| hypothetical protein NDAI_0G04240 [Naumovozyma dairenensis CBS 421]
gi|401780262|emb|CCK73409.1| hypothetical protein NDAI_0G04240 [Naumovozyma dairenensis CBS 421]
Length = 955
Score = 57.0 bits (136), Expect = 2e-06, Method: Composition-based stats.
Identities = 27/59 (45%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N ++ +PR +F Y CA+N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 394 WLMKNCQSKHDSYVPRGRIFAQYASSCAQNNLKPLSQASLGKLIRTVFPDLTTRRLGMR 452
>gi|255721817|ref|XP_002545843.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240136332|gb|EER35885.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 895
Score = 57.0 bits (136), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ E + +PR+ ++ Y++ CA+N L V+ ASFGKL++ ++ + TRRLG R
Sbjct: 295 WLLNSCELSPTAVIPRNRIYARYVQVCADNSLAPVSPASFGKLVKILYPNITTRRLGMR 353
>gi|45184814|ref|NP_982532.1| AAL010Wp [Ashbya gossypii ATCC 10895]
gi|44980423|gb|AAS50356.1| AAL010Wp [Ashbya gossypii ATCC 10895]
gi|374105731|gb|AEY94642.1| FAAL010Wp [Ashbya gossypii FDAG1]
Length = 834
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL++N +PR +F Y CA N L ++ A+ GKLIRS+F L+TRRLG R
Sbjct: 347 WLMNNCVPDGDSYVPRGRIFAQYAASCASNNLKPLSQATLGKLIRSLFPHLKTRRLGMR 405
>gi|448114991|ref|XP_004202721.1| Piso0_001573 [Millerozyma farinosa CBS 7064]
gi|359383589|emb|CCE79505.1| Piso0_001573 [Millerozyma farinosa CBS 7064]
Length = 785
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ E++ +PR+ ++ Y++ CAE+ L ++ ASFGKL+R F L TRRLG R
Sbjct: 262 WLLNSCESSPTAVVPRNRIYARYVQVCAEHSLKPLSPASFGKLVRISFPNLTTRRLGMR 320
>gi|443690129|gb|ELT92344.1| hypothetical protein CAPTEDRAFT_191221 [Capitella teleta]
Length = 479
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
+QWL+DNY+ E V++PR ++ HY C + D + + F K +VF L RRLG
Sbjct: 42 VIQWLLDNYKLCEDVAVPRDLVYQHYCHFCYKKDEDIGSRSYFTKTFSTVFPCLPLRRLG 101
Query: 148 TR 149
R
Sbjct: 102 YR 103
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 6/95 (6%)
Query: 61 TATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
A S LS D + + H+ + + WL YE + +PR ++++HY+ +C+
Sbjct: 313 CARSGVWKALSEDQRKA--HIEDV----LHWLSSEYEVVPKMCVPRQTVYDHYLDYCSCK 366
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRFL 155
+ A FG++I+ F L RRLG R R+
Sbjct: 367 QKPAAGITLFGRIIQKQFPHLTMRRLGGRGESRYF 401
>gi|448112442|ref|XP_004202097.1| Piso0_001573 [Millerozyma farinosa CBS 7064]
gi|359465086|emb|CCE88791.1| Piso0_001573 [Millerozyma farinosa CBS 7064]
Length = 785
Score = 57.0 bits (136), Expect = 3e-06, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 40/59 (67%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ E++ +PR+ ++ Y++ CAE+ L ++ ASFGKL+R F L TRRLG R
Sbjct: 262 WLLNSCESSPTAVVPRNRIYARYVQVCAEHSLKPLSPASFGKLVRISFPNLTTRRLGMR 320
>gi|358389855|gb|EHK27447.1| hypothetical protein TRIVIDRAFT_34449, partial [Trichoderma virens
Gv29-8]
Length = 791
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 209 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 255
>gi|408391005|gb|EKJ70389.1| hypothetical protein FPSE_09383 [Fusarium pseudograminearum CS3096]
Length = 762
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 173 SVPRGRVYANYASKCANERITVLNPASFGKLVRVLFPGLKTRRLGVR 219
>gi|169624220|ref|XP_001805516.1| hypothetical protein SNOG_15366 [Phaeosphaeria nodorum SN15]
gi|160705134|gb|EAT77299.2| hypothetical protein SNOG_15366 [Phaeosphaeria nodorum SN15]
Length = 822
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL TA+ S+PR+ +++ Y C +++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 194 WLRSVCRTAK-TSVPRNRVYSKYAERCGTDRVIPLNPASFGKLVRVIFPGIQTRRLGVR 251
>gi|46126085|ref|XP_387596.1| hypothetical protein FG07420.1 [Gibberella zeae PH-1]
Length = 754
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ + +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 154 WINSVCSSGKG-SVPRGRVYANYASKCANERITVLNPASFGKLVRVLFPGLKTRRLGVR 211
>gi|380487709|emb|CCF37865.1| RFX DNA-binding domain-containing protein [Colletotrichum
higginsianum]
Length = 805
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 220 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 266
>gi|358401234|gb|EHK50540.1| hypothetical protein TRIATDRAFT_83492 [Trichoderma atroviride IMI
206040]
Length = 725
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 144 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 190
>gi|440795152|gb|ELR16288.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 868
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 23/64 (35%), Positives = 39/64 (60%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P +QWL +NYE S P+ ++N Y C +++++ +A++FG+L+R F +RR
Sbjct: 31 PVVLQWLENNYEQHFDESTPKQDVYNEYSDFCKKHRIEPTSASAFGRLVRLAFPATTSRR 90
Query: 146 LGTR 149
LG R
Sbjct: 91 LGAR 94
>gi|400596074|gb|EJP63858.1| RFX DNA-binding domain-containing protein [Beauveria bassiana ARSEF
2860]
Length = 796
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 203 WINSTCTKGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 260
>gi|427788455|gb|JAA59679.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1238
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/93 (31%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 65 NTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDA 124
++G+PL A ++ T W+ + E SLP+ ++ Y +NK++
Sbjct: 133 SSGNPLGKKADAEVAQ-------TYTWIQSHLEEDPETSLPKQEVYEEYRSFFEKNKIEP 185
Query: 125 VNAASFGKLIRSVFIGLRTRRLGTRRGWRFLSS 157
+ AA FGK+++ VF +R RRLGTR R+ S
Sbjct: 186 LCAADFGKVMKHVFPSVRPRRLGTRGNSRYCYS 218
>gi|402078839|gb|EJT74104.1| hypothetical protein GGTG_07952 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 829
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 226 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 272
>gi|346974263|gb|EGY17715.1| sak1 [Verticillium dahliae VdLs.17]
Length = 795
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 208 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 254
>gi|340514662|gb|EGR44922.1| predicted protein [Trichoderma reesei QM6a]
Length = 785
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 210 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 256
>gi|322699790|gb|EFY91549.1| putative cephalosporin C regulator 1 [Metarhizium acridum CQMa 102]
Length = 776
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 189 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 235
>gi|346322924|gb|EGX92522.1| cephalosporin C regulator 1 [Cordyceps militaris CM01]
Length = 799
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 215 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 261
>gi|350294355|gb|EGZ75440.1| hypothetical protein NEUTE2DRAFT_83812 [Neurospora tetrasperma FGSC
2509]
Length = 925
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 328 WISQVCSKGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 385
>gi|444707543|gb|ELW48814.1| DNA-binding protein RFX6 [Tupaia chinensis]
Length = 795
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
T+QWL +NY EGV LPR L+ HY+ C + KL+ AA+FGK
Sbjct: 123 TLQWLEENYIVCEGVCLPRCILYAHYLDFCRKEKLEPACAATFGK 167
>gi|302910717|ref|XP_003050343.1| hypothetical protein NECHADRAFT_49316 [Nectria haematococca mpVI
77-13-4]
gi|256731280|gb|EEU44630.1| hypothetical protein NECHADRAFT_49316 [Nectria haematococca mpVI
77-13-4]
Length = 762
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 172 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 218
>gi|402226116|gb|EJU06176.1| hypothetical protein DACRYDRAFT_45233 [Dacryopinax sp. DJM-731 SS1]
Length = 715
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL NY+ ++PR L+ Y R C E ++ +N A+ GK IR F ++TRRLG R
Sbjct: 34 WLTSNYQVYPDGNVPRQGLYMSYRRVCEEYQIPHINTATLGKAIRLCFPNIKTRRLGVR 92
>gi|322705999|gb|EFY97581.1| putative cephalosporin C regulator [Metarhizium anisopliae ARSEF
23]
Length = 777
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 189 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 235
>gi|28949939|emb|CAD70925.1| related to cephalosporin C regulator 1 (cpcR1 gene) [Neurospora
crassa]
Length = 899
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 303 WISQVCSKGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 360
>gi|336472421|gb|EGO60581.1| hypothetical protein NEUTE1DRAFT_119738 [Neurospora tetrasperma
FGSC 2508]
Length = 884
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 288 WISQVCSKGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 345
>gi|310792562|gb|EFQ28089.1| RFX DNA-binding domain-containing protein [Glomerella graminicola
M1.001]
Length = 767
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 187 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 233
>gi|164424726|ref|XP_961016.2| hypothetical protein NCU06701 [Neurospora crassa OR74A]
gi|157070635|gb|EAA31780.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 854
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ +G S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 258 WISQVCSKGKG-SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 315
>gi|429864000|gb|ELA38390.1| cephalosporin c regulator 1 [Colletotrichum gloeosporioides Nara
gc5]
Length = 762
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 178 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 224
>gi|336262769|ref|XP_003346167.1| hypothetical protein SMAC_06634 [Sordaria macrospora k-hell]
gi|380088767|emb|CCC13345.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 769
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 210 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 256
>gi|440799779|gb|ELR20822.1| RFX DNA-binding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1025
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P VQWL D YE EG ++ R +++ YI CA N A+ GK+ + VF + RR
Sbjct: 68 PIIVQWLQDTYEEKEGKTVGRYQVYDDYIEFCARAGHLPTNNAALGKIFKRVFPNVGWRR 127
Query: 146 LGTR 149
LG R
Sbjct: 128 LGKR 131
>gi|302416773|ref|XP_003006218.1| sak1 [Verticillium albo-atrum VaMs.102]
gi|261355634|gb|EEY18062.1| sak1 [Verticillium albo-atrum VaMs.102]
Length = 589
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 208 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 254
>gi|119622217|gb|EAX01812.1| FLJ42986 protein, isoform CRA_a [Homo sapiens]
Length = 700
Score = 55.5 bits (132), Expect = 7e-06, Method: Composition-based stats.
Identities = 29/72 (40%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 87 ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
+QWL+DN+ E S+PR ++ Y+ C +N + VN A+FGKL R GL L
Sbjct: 21 GVIQWLVDNFCICEECSVPRCLMYEIYVETCGQNTENQVNPATFGKLTRC---GLTP--L 75
Query: 147 GTRRGWRFLSSS 158
G R G ++L SS
Sbjct: 76 GGREGGKWLYSS 87
>gi|320588550|gb|EFX01018.1| DNA damage and replication checkpoint protein [Grosmannia clavigera
kw1407]
Length = 754
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 227 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 273
>gi|396494503|ref|XP_003844319.1| hypothetical protein LEMA_P019700.1 [Leptosphaeria maculans JN3]
gi|312220899|emb|CBY00840.1| hypothetical protein LEMA_P019700.1 [Leptosphaeria maculans JN3]
Length = 817
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +A+ S+PR+ +++ Y C +++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 197 WLKSVCRSAK-TSVPRNRVYSKYAERCGTDRVIPLNPASFGKLVRVIFPGIQTRRLGVR 254
>gi|407916516|gb|EKG09884.1| DNA-binding RFX [Macrophomina phaseolina MS6]
Length = 731
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL + A+ S+PR+ +++ Y CA ++ +N ASFGKL+R +F G+ TRRLG R
Sbjct: 111 WLRQTCKHAK-TSVPRNRVYSQYADRCATERVQPLNPASFGKLVRVIFPGIATRRLGVR 168
>gi|351700646|gb|EHB03565.1| DNA-binding protein RFX7 [Heterocephalus glaber]
Length = 1416
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 38/65 (58%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 109 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 168
Query: 151 GWRFL 155
++L
Sbjct: 169 KSKYL 173
>gi|171692829|ref|XP_001911339.1| hypothetical protein [Podospora anserina S mat+]
gi|170946363|emb|CAP73164.1| unnamed protein product [Podospora anserina S mat+]
Length = 761
Score = 55.5 bits (132), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F GL+TRRLG R
Sbjct: 177 SVPRGRVYANYASRCATERITVLNPASFGKLVRVLFPGLKTRRLGVR 223
>gi|50289055|ref|XP_446957.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526266|emb|CAG59890.1| unnamed protein product [Candida glabrata]
Length = 1021
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 35/59 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N G + R +F Y+ CA+N L ++ A+ GKLIRS++ L TRRLG R
Sbjct: 372 WLMKNCILQPGAYVRRGRIFAQYVSSCAQNGLKPLSQATLGKLIRSLYPKLTTRRLGMR 430
>gi|349579891|dbj|GAA25052.1| K7_Rfx1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 811
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 288 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMR 346
>gi|255720230|ref|XP_002556395.1| KLTH0H12144p [Lachancea thermotolerans]
gi|238942361|emb|CAR30533.1| KLTH0H12144p [Lachancea thermotolerans CBS 6340]
Length = 740
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL++ + +PR +F Y CA+N L ++ A+ GKLIR++F L TRRLG R
Sbjct: 272 WLMNTCVEEKNSFVPRGRIFAQYAACCAQNNLKPLSQATLGKLIRTIFPDLTTRRLGMRG 331
Query: 151 -------GWRFLSSSQSALTRVIALG 169
G + SS+SA + V +LG
Sbjct: 332 QSKYHYCGLNLIGSSRSA-SPVPSLG 356
>gi|6323205|ref|NP_013277.1| Rfx1p [Saccharomyces cerevisiae S288c]
gi|3123263|sp|P48743.2|RFX1_YEAST RecName: Full=RFX-like DNA-binding protein RFX1
gi|2340986|gb|AAB67470.1| Ylr176cp [Saccharomyces cerevisiae]
gi|285813600|tpg|DAA09496.1| TPA: Rfx1p [Saccharomyces cerevisiae S288c]
Length = 811
Score = 55.1 bits (131), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 288 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMR 346
>gi|440797165|gb|ELR18260.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 681
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 100 EGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
EG S+PR +F+ Y++ C ++L+ N A+FGKL + VF RRLG RR
Sbjct: 41 EGHSVPRQDIFDAYLQECKAHQLETTNQAAFGKLFKRVFPSAGARRLGQRR 91
>gi|323336448|gb|EGA77715.1| Rfx1p [Saccharomyces cerevisiae Vin13]
Length = 718
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N ++ +PR +F Y C++N L ++ AS GKLIR+VF L TRRLG R
Sbjct: 195 WLMKNCKSQHDSYVPRGKIFAQYASSCSQNNLKPLSQASLGKLIRTVFPDLTTRRLGMR 253
>gi|440804824|gb|ELR25690.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 561
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P WL+ + +G +P+ +F Y CA++ ++ ASFGK ++ +F G+ TRR
Sbjct: 14 PDVKNWLLSAFREKKGYFVPKKDVFGAYADFCAQHHYESTTPASFGKFLKKIFPGVETRR 73
Query: 146 L 146
L
Sbjct: 74 L 74
>gi|452000148|gb|EMD92610.1| hypothetical protein COCHEDRAFT_1174762 [Cochliobolus
heterostrophus C5]
Length = 823
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C +++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 217 SVPRNRVYSKYAERCGTDRVIPLNPASFGKLVRVIFPGIQTRRLGVR 263
>gi|440804248|gb|ELR25125.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 341
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 37/62 (59%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T Q L +NYE S+ + +++HY+ HC + + A+ FGKL+ F GL++ R+G
Sbjct: 58 TWQPLQENYEVGCRESIAKEDVYHHYVAHCQAEGTEPLRASMFGKLVHRAFPGLKSSRIG 117
Query: 148 TR 149
TR
Sbjct: 118 TR 119
>gi|451854235|gb|EMD67528.1| hypothetical protein COCSADRAFT_34318 [Cochliobolus sativus ND90Pr]
Length = 826
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C +++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 220 SVPRNRVYSKYAERCGTDRVIPLNPASFGKLVRVIFPGIQTRRLGVR 266
>gi|189190522|ref|XP_001931600.1| cephalosporin C regulator 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187973206|gb|EDU40705.1| cephalosporin C regulator 1 [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 833
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C +++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 211 SVPRNRVYSKYAERCGTDRVIPLNPASFGKLVRVIFPGIQTRRLGVR 257
>gi|330918901|ref|XP_003298389.1| hypothetical protein PTT_09109 [Pyrenophora teres f. teres 0-1]
gi|311328427|gb|EFQ93529.1| hypothetical protein PTT_09109 [Pyrenophora teres f. teres 0-1]
Length = 816
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 34/47 (72%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C +++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 211 SVPRNRVYSKYAERCGTDRVIPLNPASFGKLVRVIFPGIQTRRLGVR 257
>gi|449301018|gb|EMC97029.1| hypothetical protein BAUCODRAFT_23427 [Baudoinia compniacensis UAMH
10762]
Length = 949
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C ++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 195 SVPRNRVYSQYASRCGTERVVPLNPASFGKLVRVIFPGIQTRRLGVR 241
>gi|389644440|ref|XP_003719852.1| hypothetical protein MGG_04000 [Magnaporthe oryzae 70-15]
gi|351639621|gb|EHA47485.1| hypothetical protein MGG_04000 [Magnaporthe oryzae 70-15]
gi|440470042|gb|ELQ39131.1| hypothetical protein OOU_Y34scaffold00514g48 [Magnaporthe oryzae
Y34]
gi|440490039|gb|ELQ69634.1| hypothetical protein OOW_P131scaffold00134g6 [Magnaporthe oryzae
P131]
Length = 797
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 32/47 (68%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR ++ +Y CA ++ +N ASFGKL+R +F L+TRRLG R
Sbjct: 208 SVPRGRVYANYASKCASERVTVLNPASFGKLVRVIFPKLKTRRLGVR 254
>gi|391327989|ref|XP_003738476.1| PREDICTED: DNA-binding protein RFX5-like [Metaseiulus occidentalis]
Length = 280
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T W+ + E VSLP+ ++N Y + + L+A+ A FGK+++ VF +R RRLG
Sbjct: 69 TYAWIRGHLEEDRDVSLPKQEVYNEYKAYFEAHALEALCTADFGKVMKHVFPAVRARRLG 128
Query: 148 TRRGWRFLSSSQS 160
R R+ S S
Sbjct: 129 ERGKSRYCYSGLS 141
>gi|449471014|ref|XP_004176939.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX7
[Taeniopygia guttata]
Length = 1375
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|291234361|ref|XP_002737118.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 679
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E ++ SLP+ ++ Y C + ++AA FGK+I+ VF ++ RRLGTR
Sbjct: 54 WIRSHLEESQSTSLPKHEVYEDYRSFCESSNHSVLSAADFGKIIKCVFPTIKARRLGTRG 113
Query: 151 GWRFLSS 157
++ S
Sbjct: 114 NSKYCYS 120
>gi|398394018|ref|XP_003850468.1| hypothetical protein MYCGRDRAFT_110369 [Zymoseptoria tritici
IPO323]
gi|339470346|gb|EGP85444.1| hypothetical protein MYCGRDRAFT_110369 [Zymoseptoria tritici
IPO323]
Length = 878
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C ++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 185 SVPRNRVYSQYATRCGTERVVPLNPASFGKLVRVIFPGIQTRRLGVR 231
>gi|109081239|ref|XP_001090465.1| PREDICTED: DNA-binding protein RFX7 isoform 1 [Macaca mulatta]
Length = 1280
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|34535225|dbj|BAC87248.1| unnamed protein product [Homo sapiens]
Length = 1281
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|410961179|ref|XP_003987162.1| PREDICTED: DNA-binding protein RFX7 [Felis catus]
Length = 1459
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|354465218|ref|XP_003495077.1| PREDICTED: DNA-binding protein RFX7-like [Cricetulus griseus]
gi|344243782|gb|EGV99885.1| DNA-binding protein RFX7 [Cricetulus griseus]
Length = 1459
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|359323451|ref|XP_003640104.1| PREDICTED: DNA-binding protein RFX7-like [Canis lupus familiaris]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|403288983|ref|XP_003935652.1| PREDICTED: DNA-binding protein RFX7 [Saimiri boliviensis
boliviensis]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|395746763|ref|XP_003778505.1| PREDICTED: DNA-binding protein RFX7 isoform 2 [Pongo abelii]
Length = 1282
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|363737935|ref|XP_429081.3| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX7 [Gallus
gallus]
Length = 1436
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 78 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 137
Query: 151 GWRFLSS 157
++ S
Sbjct: 138 KSKYCYS 144
>gi|332843882|ref|XP_510432.3| PREDICTED: DNA-binding protein RFX7 isoform 2 [Pan troglodytes]
gi|410334241|gb|JAA36067.1| regulatory factor X, 7 [Pan troglodytes]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|297296511|ref|XP_001090581.2| PREDICTED: DNA-binding protein RFX7 isoform 2 [Macaca mulatta]
Length = 1459
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|332235632|ref|XP_003267010.1| PREDICTED: DNA-binding protein RFX7 [Nomascus leucogenys]
Length = 1363
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|301775138|ref|XP_002922988.1| PREDICTED: DNA-binding protein RFX7-like [Ailuropoda melanoleuca]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|219521445|gb|AAI43439.1| RFX7 protein [Homo sapiens]
Length = 1292
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 30 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 89
Query: 151 GWRFLSS 157
++ S
Sbjct: 90 KSKYCYS 96
>gi|291402954|ref|XP_002717768.1| PREDICTED: regulatory factor X domain containing 2 [Oryctolagus
cuniculus]
Length = 1461
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|410082559|ref|XP_003958858.1| hypothetical protein KAFR_0H03130 [Kazachstania africana CBS 2517]
gi|372465447|emb|CCF59723.1| hypothetical protein KAFR_0H03130 [Kazachstania africana CBS 2517]
Length = 697
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W++ N E + RS++F +Y CA+ L ++ AS GKLIRSVF + TRRLG R
Sbjct: 277 WIMRNCEAENDCYVARSTIFAYYASFCAKYNLKPLSQASLGKLIRSVFPHISTRRLGMR 335
>gi|300796622|ref|NP_001179749.1| DNA-binding protein RFX7 [Bos taurus]
gi|296483180|tpg|DAA25295.1| TPA: regulatory factor X, 7 [Bos taurus]
Length = 1461
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|397515362|ref|XP_003827922.1| PREDICTED: DNA-binding protein RFX7 [Pan paniscus]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|88703055|ref|NP_001028708.1| regulatory factor X domain containing 2 [Mus musculus]
gi|162319108|gb|AAI56262.1| Regulatory factor X, 7 [synthetic construct]
Length = 1459
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|297696718|ref|XP_002825529.1| PREDICTED: DNA-binding protein RFX7 isoform 1 [Pongo abelii]
Length = 1363
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|426233260|ref|XP_004010635.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX7 [Ovis
aries]
Length = 1454
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|121946796|sp|Q2KHR2.1|RFX7_HUMAN RecName: Full=DNA-binding protein RFX7; AltName: Full=Regulatory
factor X 7; AltName: Full=Regulatory factor X
domain-containing protein 2
gi|86577734|gb|AAI12937.1| Regulatory factor X, 7 [Homo sapiens]
Length = 1363
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRFLSS 157
++ S
Sbjct: 74 KSKYCYS 80
>gi|344252240|gb|EGW08344.1| DNA-binding protein RFX6 [Cricetulus griseus]
Length = 582
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 45/84 (53%), Gaps = 5/84 (5%)
Query: 54 DEPAQATTATSNTGDPLSPDNQASLSHVTK----ISPATVQWLIDNYETAEGVSLPRSSL 109
+E A + + DP + S++ + K + T+QWL DNY EGV LPR L
Sbjct: 80 EEDADTHESKTKAADP-QLSQKKSITQIMKDKKKQTQLTLQWLEDNYIVCEGVCLPRCIL 138
Query: 110 FNHYIRHCAENKLDAVNAASFGKL 133
+ HY+ C + KL+ AA+FGK+
Sbjct: 139 YAHYLDFCRKEKLEPACAATFGKV 162
>gi|148613886|ref|NP_073752.5| DNA-binding protein RFX7 [Homo sapiens]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|149691918|ref|XP_001500788.1| PREDICTED: DNA-binding protein RFX7 [Equus caballus]
Length = 1459
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|395822224|ref|XP_003784422.1| PREDICTED: DNA-binding protein RFX7 [Otolemur garnettii]
Length = 1460
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|242004405|ref|XP_002423081.1| rfx5, putative [Pediculus humanus corporis]
gi|212506012|gb|EEB10343.1| rfx5, putative [Pediculus humanus corporis]
Length = 962
Score = 53.9 bits (128), Expect = 2e-05, Method: Composition-based stats.
Identities = 22/78 (28%), Positives = 46/78 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T+ W+ + E +S+P+ +++ Y+++C + ++ A FGK+++ V+ G+R RRLG
Sbjct: 16 TIVWIKTHLEEDSEISIPKQDVYDQYLKYCENVTMKPLSTADFGKVMKQVYPGVRPRRLG 75
Query: 148 TRRGWRFLSSSQSALTRV 165
TR R+ S +++
Sbjct: 76 TRGNSRYCYSGMRNTSKL 93
>gi|417406502|gb|JAA49908.1| Putative dna-binding protein rfx7 regulatory factor x 7 [Desmodus
rotundus]
Length = 1460
Score = 53.9 bits (128), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|188595675|ref|NP_001120962.1| regulatory factor X domain containing 2 [Rattus norvegicus]
Length = 1459
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|302658681|ref|XP_003021042.1| DNA damage and replication checkpoint protein Rfx1, putative
[Trichophyton verrucosum HKI 0517]
gi|291184917|gb|EFE40424.1| DNA damage and replication checkpoint protein Rfx1, putative
[Trichophyton verrucosum HKI 0517]
Length = 880
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + +G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 260 WLRENCQRGDG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 317
>gi|126277186|ref|XP_001368345.1| PREDICTED: DNA-binding protein RFX7 [Monodelphis domestica]
Length = 1455
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|315048385|ref|XP_003173567.1| hypothetical protein MGYG_03742 [Arthroderma gypseum CBS 118893]
gi|311341534|gb|EFR00737.1| hypothetical protein MGYG_03742 [Arthroderma gypseum CBS 118893]
Length = 901
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + +G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 283 WLRENCQRGDG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 340
>gi|747966|gb|AAA67937.1| RFX family DNA-binding protein [Schizosaccharomyces pombe]
Length = 734
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+ WL E + ++ R+ ++ HY+ C + +N+ASFGKL+R +F ++TRRLG
Sbjct: 102 ICWLKRACEEQQDAAVQRNQIYAHYVEICNSLHIKPLNSASFGKLVRLLFPSIKTRRLGM 161
Query: 149 R 149
R
Sbjct: 162 R 162
>gi|149028792|gb|EDL84133.1| similar to hypothetical protein FLJ12994 (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 1378
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|148694315|gb|EDL26262.1| mCG131701, isoform CRA_a [Mus musculus]
Length = 1378
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|326479921|gb|EGE03931.1| RfxA protein [Trichophyton equinum CBS 127.97]
Length = 885
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + +G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 265 WLRENCQRGDG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 322
>gi|355692740|gb|EHH27343.1| hypothetical protein EGK_17520 [Macaca mulatta]
Length = 1364
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRF 154
++
Sbjct: 74 KSKY 77
>gi|327300689|ref|XP_003235037.1| hypothetical protein TERG_04089 [Trichophyton rubrum CBS 118892]
gi|326462389|gb|EGD87842.1| hypothetical protein TERG_04089 [Trichophyton rubrum CBS 118892]
Length = 891
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + +G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 271 WLRENCQRGDG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 328
>gi|348572125|ref|XP_003471844.1| PREDICTED: DNA-binding protein RFX7-like [Cavia porcellus]
Length = 1460
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 112 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 171
Query: 151 GWRFLSS 157
++ S
Sbjct: 172 KSKYCYS 178
>gi|395502834|ref|XP_003755779.1| PREDICTED: DNA-binding protein RFX7 [Sarcophilus harrisii]
Length = 1421
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 71 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 130
Query: 151 GWRFLSS 157
++ S
Sbjct: 131 KSKYCYS 137
>gi|326926581|ref|XP_003209477.1| PREDICTED: DNA-binding protein RFX7-like [Meleagris gallopavo]
Length = 1401
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 124 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 183
Query: 151 GWRFLSS 157
++ S
Sbjct: 184 KSKYCYS 190
>gi|19114998|ref|NP_594086.1| transcriptional repressor Sak1 [Schizosaccharomyces pombe 972h-]
gi|6174972|sp|P48383.2|SAK1_SCHPO RecName: Full=Protein sak1
gi|2706465|emb|CAA15923.1| transcriptional repressor Sak1 [Schizosaccharomyces pombe]
Length = 766
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+ WL E + ++ R+ ++ HY+ C + +N+ASFGKL+R +F ++TRRLG
Sbjct: 102 ICWLKRACEEQQDAAVQRNQIYAHYVEICNSLHIKPLNSASFGKLVRLLFPSIKTRRLGM 161
Query: 149 R 149
R
Sbjct: 162 R 162
>gi|355761601|gb|EHH61834.1| hypothetical protein EGM_19959 [Macaca fascicularis]
Length = 1364
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRF 154
++
Sbjct: 74 KSKY 77
>gi|281353352|gb|EFB28936.1| hypothetical protein PANDA_012053 [Ailuropoda melanoleuca]
Length = 1365
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 14 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 73
Query: 151 GWRF 154
++
Sbjct: 74 KSKY 77
>gi|440804185|gb|ELR25062.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 381
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+ WL NY G S P++ LF Y+ C ++ + ++FGKL+R+ F G+++ R G
Sbjct: 30 IHWLRQNYYLGSGGSTPKALLFQEYLDMCQAENVEPTSNSAFGKLVRTAFPGVQSSRKGP 89
Query: 149 R 149
R
Sbjct: 90 R 90
>gi|402874402|ref|XP_003901028.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX7 [Papio
anubis]
Length = 1413
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 69 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 128
Query: 151 GWRFLSS 157
++ S
Sbjct: 129 KSKYCYS 135
>gi|326468598|gb|EGD92607.1| hypothetical protein TESG_00180 [Trichophyton tonsurans CBS 112818]
Length = 818
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + +G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 275 WLRENCQRGDG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 332
>gi|148233185|ref|NP_001090849.1| regulatory factor X, 7 [Xenopus (Silurana) tropicalis]
gi|126632049|gb|AAI33721.1| rfx7 protein [Xenopus (Silurana) tropicalis]
Length = 1439
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|410908613|ref|XP_003967785.1| PREDICTED: DNA-binding protein RFX7-like [Takifugu rubripes]
Length = 1426
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 40/67 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E + SLP+ +++ Y +C + ++AA FGK++++VF ++ RRLG R
Sbjct: 101 WIRNHLEEHQETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPTMKARRLGMRG 160
Query: 151 GWRFLSS 157
++ S
Sbjct: 161 KSKYCYS 167
>gi|302505685|ref|XP_003014549.1| DNA damage and replication checkpoint protein Rfx1, putative
[Arthroderma benhamiae CBS 112371]
gi|291178370|gb|EFE34160.1| DNA damage and replication checkpoint protein Rfx1, putative
[Arthroderma benhamiae CBS 112371]
Length = 898
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + +G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 277 WLRENCQRGDG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 334
>gi|344293449|ref|XP_003418435.1| PREDICTED: DNA-binding protein RFX7 [Loxodonta africana]
Length = 1446
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 96 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 155
Query: 151 GWRFLSS 157
++ S
Sbjct: 156 KSKYCYS 162
>gi|452841261|gb|EME43198.1| hypothetical protein DOTSEDRAFT_132769 [Dothistroma septosporum
NZE10]
Length = 702
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C ++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 72 SVPRNRVYSQYATRCGTERVIPLNPASFGKLVRVIFPGIQTRRLGVR 118
>gi|47213155|emb|CAF93845.1| unnamed protein product [Tetraodon nigroviridis]
Length = 564
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T W+ + E LP+ ++ Y R+C + ++AA+FGK+IR +F ++ RRLG
Sbjct: 40 TCNWIRSHLEEHSDTCLPKQDVYETYRRYCENLQYRPLSAANFGKIIRDIFPNIKARRLG 99
Query: 148 TRRGWRFLS 156
R ++ S
Sbjct: 100 GRGQSKYPS 108
>gi|343428951|emb|CBQ72496.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 676
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 91 WLIDNY--ETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
WL NY + + +S+PR+ L Y R C L+ + AASFGK++RS F + RRLG
Sbjct: 307 WLTCNYTLKPSIQISIPRTILHESYRRACDSFGLEPLQAASFGKVLRSQFPDVAQRRLGG 366
Query: 149 RRGWRF 154
R RF
Sbjct: 367 RGKTRF 372
>gi|431895971|gb|ELK05389.1| DNA-binding protein RFX7 [Pteropus alecto]
Length = 1463
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 110 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 169
Query: 151 GWRF 154
++
Sbjct: 170 KSKY 173
>gi|410911444|ref|XP_003969200.1| PREDICTED: uncharacterized protein LOC101069988 [Takifugu rubripes]
Length = 590
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 38/70 (54%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T W+ + E LP+ ++ Y R+C + ++AA+FGK+IR +F ++ RRLG
Sbjct: 89 TCNWIRSHLEEHSDTCLPKQDVYETYRRYCENLQYRPLSAANFGKIIRDIFPNIKARRLG 148
Query: 148 TRRGWRFLSS 157
R ++ S
Sbjct: 149 GRGQSKYCYS 158
>gi|189521400|ref|XP_688865.3| PREDICTED: DNA-binding protein RFX7-like [Danio rerio]
Length = 1466
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 39/67 (58%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E SLP+ +++ Y +C A++AA FGK++++VF ++ RRLG R
Sbjct: 97 WIRNHLEEHPETSLPKQEVYDEYKSYCDSLGYHALSAADFGKIMKNVFPNMKARRLGMRG 156
Query: 151 GWRFLSS 157
++ S
Sbjct: 157 KSKYCYS 163
>gi|453083628|gb|EMF11673.1| RFX_DNA_binding-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 716
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C ++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 106 SVPRNRVYSQYATRCGTERVVPLNPASFGKLVRVIFPGIQTRRLGVR 152
>gi|348512935|ref|XP_003443998.1| PREDICTED: DNA-binding protein RFX7-like [Oreochromis niloticus]
Length = 1438
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E SLP+ +++ Y +C + ++AA FGK++++VF ++ RRLG R
Sbjct: 101 WIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRG 160
Query: 151 GWRFLSS 157
++ S
Sbjct: 161 KSKYCYS 167
>gi|452982606|gb|EME82365.1| hypothetical protein MYCFIDRAFT_10959, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 554
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR+ +++ Y C ++ +N ASFGKL+R +F G++TRRLG R
Sbjct: 62 SVPRNRVYSQYATRCGTERVVPLNPASFGKLVRVIFPGIQTRRLGVR 108
>gi|149238798|ref|XP_001525275.1| hypothetical protein LELG_03203 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146450768|gb|EDK45024.1| hypothetical protein LELG_03203 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1018
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 39/59 (66%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+++ E + +PR+ ++ Y++ CA+ L ++ ASFGKL++ ++ + TRRLG R
Sbjct: 370 WLLNSCEISPTAVIPRNRIYARYVQVCADYGLSPLSPASFGKLVKILYPNITTRRLGMR 428
>gi|432852772|ref|XP_004067377.1| PREDICTED: DNA-binding protein RFX7-like [Oryzias latipes]
Length = 1368
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ D+ E SLP+ +++ Y C ++AA FGK++++VF ++ RRLG R
Sbjct: 98 WIRDHLEEYPETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRG 157
Query: 151 GWRFLSS 157
++ S
Sbjct: 158 KSKYCYS 164
>gi|296214091|ref|XP_002807241.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX7-like
[Callithrix jacchus]
Length = 1444
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 37/67 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRSTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|149636722|ref|XP_001514248.1| PREDICTED: DNA-binding protein RFX7 [Ornithorhynchus anatinus]
Length = 1500
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 140 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 199
Query: 151 GWRFLSS 157
++ S
Sbjct: 200 KSKYCYS 206
>gi|432863122|ref|XP_004070001.1| PREDICTED: DNA-binding protein RFX7-like [Oryzias latipes]
Length = 1421
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 39/67 (58%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E SLP+ +++ Y +C + ++AA FGK++++VF ++ RRLG R
Sbjct: 101 WIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPNMKARRLGMRG 160
Query: 151 GWRFLSS 157
++ S
Sbjct: 161 KSKYCYS 167
>gi|7406519|emb|CAB85587.1| cephalosporin C regulator 1 [Acremonium chrysogenum]
Length = 830
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 33/47 (70%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+PR +++ Y C ++++ +N ASFGKL+R VF ++TRRLG R
Sbjct: 238 SIPRGRVYHTYASKCTDDRVVVLNPASFGKLVRVVFPSIKTRRLGVR 284
>gi|296415183|ref|XP_002837271.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633132|emb|CAZ81462.1| unnamed protein product [Tuber melanosporum]
Length = 744
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 34/48 (70%)
Query: 102 VSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
V++PR+ ++ Y+ CA ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 228 VAVPRNRVYARYVGICANERIKPLNPASFGKLVRLMFPEIKTRRLGVR 275
>gi|432882295|ref|XP_004073964.1| PREDICTED: uncharacterized protein LOC101161817 [Oryzias latipes]
Length = 661
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T W+ + E LP+ ++ Y R+C + ++AA FGK+IR +F ++ RRLG
Sbjct: 95 TCNWIRSHLEEHSDTCLPKQDVYEAYKRYCKNLRHRPLSAAIFGKIIRDIFPNIKARRLG 154
Query: 148 TRRGWRFLSS 157
R ++ S
Sbjct: 155 GRGQSKYCYS 164
>gi|403170268|ref|XP_003329641.2| hypothetical protein PGTG_11391 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375168644|gb|EFP85222.2| hypothetical protein PGTG_11391 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1108
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 37/64 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL +Y + ++ R L+ Y+R C + + +N+ASFGK +R F ++TRRLG R
Sbjct: 431 WLNSSYISYTDGNVSRQGLYGSYLRICQQYDIKPINSASFGKSVRQSFPNIKTRRLGVRG 490
Query: 151 GWRF 154
++
Sbjct: 491 NSKY 494
>gi|390362908|ref|XP_001199149.2| PREDICTED: uncharacterized protein LOC763239 [Strongylocentrotus
purpuratus]
Length = 1478
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
V W+ + E + SLP+ ++ Y C + ++ A FGK+I+ VF ++ RRLGT
Sbjct: 137 VNWVRSHIEESPDTSLPKQEVYEEYRTFCENSGHRPLSTADFGKIIKGVFPAVQARRLGT 196
Query: 149 RRGWRFLSS 157
R R+ S
Sbjct: 197 RGNSRYCYS 205
>gi|390370717|ref|XP_784521.2| PREDICTED: uncharacterized protein LOC579306 [Strongylocentrotus
purpuratus]
Length = 1418
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 37/69 (53%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
V W+ + E + SLP+ ++ Y C + ++ A FGK+I+ VF ++ RRLGT
Sbjct: 77 VNWVRSHIEESPDTSLPKQEVYEEYRTFCENSGHRPLSTADFGKIIKGVFPAVQARRLGT 136
Query: 149 RRGWRFLSS 157
R R+ S
Sbjct: 137 RGNSRYCYS 145
>gi|327290873|ref|XP_003230146.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX7-like
[Anolis carolinensis]
Length = 1558
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 139 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 198
Query: 151 GWRFLSS 157
++ S
Sbjct: 199 KSKYCYS 205
>gi|296809129|ref|XP_002844903.1| RfxA [Arthroderma otae CBS 113480]
gi|238844386|gb|EEQ34048.1| RfxA [Arthroderma otae CBS 113480]
Length = 865
Score = 52.8 bits (125), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C +++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 249 WLRENCQRGNG-SVRRDRVYCCYAEKCGNDRVSVLNPASFGKLVRIIFPNVQTRRLGVR 306
>gi|388857875|emb|CCF48540.1| uncharacterized protein [Ustilago hordei]
Length = 672
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 91 WLIDNY--ETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
WL NY + + +S+PR+ L Y R C L+ + AASFGK++RS F + RRLG
Sbjct: 296 WLTCNYTLKPSIQISIPRTILHESYRRACDSFGLEPLQAASFGKVLRSQFPDVAQRRLGG 355
Query: 149 RRGWRF 154
R RF
Sbjct: 356 RGKTRF 361
>gi|299747654|ref|XP_001837175.2| hypothetical protein CC1G_00311 [Coprinopsis cinerea okayama7#130]
gi|298407620|gb|EAU84792.2| hypothetical protein CC1G_00311 [Coprinopsis cinerea okayama7#130]
Length = 853
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY T ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 196 WLTANYATYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 255
Query: 151 GWRF 154
++
Sbjct: 256 NSKY 259
>gi|213410285|ref|XP_002175912.1| sak1 [Schizosaccharomyces japonicus yFS275]
gi|212003959|gb|EEB09619.1| sak1 [Schizosaccharomyces japonicus yFS275]
Length = 706
Score = 52.4 bits (124), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL N E ++ R+ ++ Y+ C + +N ASFGKL+R +F ++TRRLGTR
Sbjct: 71 WLKRNCEAQADAAVQRNHIYAQYVDSCNALRTKPLNPASFGKLVRLLFPAIKTRRLGTR 129
>gi|71024451|ref|XP_762455.1| hypothetical protein UM06308.1 [Ustilago maydis 521]
gi|46097704|gb|EAK82937.1| hypothetical protein UM06308.1 [Ustilago maydis 521]
Length = 672
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 2/66 (3%)
Query: 91 WLIDNY--ETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
WL NY + + +S+PR+ L Y R C L+ + AASFGK++RS F + RRLG
Sbjct: 305 WLTCNYTLKPSIQISIPRTILHESYRRACDALGLEPLQAASFGKVLRSQFPDVVQRRLGG 364
Query: 149 RRGWRF 154
R RF
Sbjct: 365 RGKTRF 370
>gi|326680871|ref|XP_003201650.1| PREDICTED: DNA-binding protein RFX7-like [Danio rerio]
Length = 1431
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLG R
Sbjct: 92 WIRNHLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGMRG 151
Query: 151 GWRFLSS 157
++ S
Sbjct: 152 KSKYCYS 158
>gi|378730149|gb|EHY56608.1| regulatory factor X, other [Exophiala dermatitidis NIH/UT8656]
Length = 945
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + + S+ R +F Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 234 WLQENCQRSSN-SVRRDRVFTRYTERCGNERVPTLNPASFGKLVRIIFPNVQTRRLGVR 291
>gi|74189197|dbj|BAC41187.2| unnamed protein product [Mus musculus]
Length = 309
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|254569886|ref|XP_002492053.1| Major transcriptional repressor of DNA-damage-regulated genes
[Komagataella pastoris GS115]
gi|238031850|emb|CAY69773.1| Major transcriptional repressor of DNA-damage-regulated genes
[Komagataella pastoris GS115]
gi|328351456|emb|CCA37855.1| MHC class II regulatory factor RFX1 [Komagataella pastoris CBS
7435]
Length = 930
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 7/77 (9%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR- 150
L+ E + + R+ ++N+Y C N + ++AASFGKL+R VF + TRRLGTR
Sbjct: 284 LLKTCELSADSVVARNKIYNYYASICLSNGISPLSAASFGKLVRIVFPLVTTRRLGTRGQ 343
Query: 151 ------GWRFLSSSQSA 161
G R ++ S+S
Sbjct: 344 SKYHYCGIRLIADSESC 360
>gi|440803878|gb|ELR24761.1| hypothetical protein ACA1_174210 [Acanthamoeba castellanii str.
Neff]
Length = 1011
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRR 145
P ++WL +E EG LP+ +++ Y R C N + N A+ G+LI+ F R RR
Sbjct: 26 PLVLEWLRSAFEEREGTRLPKQEVYDAYERFCQRNGFERTNTAALGRLIKKAFPTSRGRR 85
>gi|47220534|emb|CAG05560.1| unnamed protein product [Tetraodon nigroviridis]
Length = 316
Score = 52.0 bits (123), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 39/64 (60%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E + SLP+ +++ Y +C + ++AA FGK++++VF ++ RRLG R
Sbjct: 59 WIRNHLEEHQETSLPKQEVYDEYKSYCDNLGYNPLSAADFGKIMKNVFPTMKARRLGMRG 118
Query: 151 GWRF 154
++
Sbjct: 119 KSKY 122
>gi|387593659|gb|EIJ88683.1| hypothetical protein NEQG_01373 [Nematocida parisii ERTm3]
Length = 388
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL NY + S+PR ++ HY E ++ +N A FGK+I+ F +R+RRLG R
Sbjct: 13 WLNLNYVPCKDNSIPRCIIYQHYCNDFKEKGIEPLNTAMFGKVIKMAFPFIRSRRLGNR 71
>gi|393246274|gb|EJD53783.1| hypothetical protein AURDEDRAFT_110534 [Auricularia delicata
TFB-10046 SS5]
Length = 820
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL NY T ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 185 WLNANYATYPDGNVPRQGLYMSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVR 243
>gi|387597315|gb|EIJ94935.1| hypothetical protein NEPG_00460 [Nematocida parisii ERTm1]
Length = 388
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL NY + S+PR ++ HY E ++ +N A FGK+I+ F +R+RRLG R
Sbjct: 13 WLNLNYVPCKDNSIPRCIIYQHYCNDFKEKGIEPLNTAMFGKVIKMAFPFIRSRRLGNR 71
>gi|50552996|ref|XP_503908.1| YALI0E13596p [Yarrowia lipolytica]
gi|49649777|emb|CAG79501.1| YALI0E13596p [Yarrowia lipolytica CLIB122]
Length = 712
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ E E S+ RS ++ Y+ C+++ + +N ASFGKL+R ++ L TRRLG R
Sbjct: 175 WLMKFCELNEQSSVLRSRIYARYVTMCSQHNVRPMNPASFGKLVRVIYPDLTTRRLGVR 233
>gi|350634049|gb|EHA22413.1| hypothetical protein ASPNIDRAFT_57286 [Aspergillus niger ATCC 1015]
Length = 851
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 214 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 271
>gi|358373277|dbj|GAA89876.1| DNA damage and replication checkpoint protein Rfx1 [Aspergillus
kawachii IFO 4308]
Length = 851
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 214 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 271
>gi|145253777|ref|XP_001398401.1| DNA damage and replication checkpoint protein Rfx1 [Aspergillus
niger CBS 513.88]
gi|134083973|emb|CAK43068.1| unnamed protein product [Aspergillus niger]
Length = 885
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 248 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 305
>gi|261198523|ref|XP_002625663.1| RfxA [Ajellomyces dermatitidis SLH14081]
gi|239594815|gb|EEQ77396.1| RfxA [Ajellomyces dermatitidis SLH14081]
Length = 862
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 231 WLRENCQKNSG-SVRRDRVYCSYAEKCGSERVSVLNPASFGKLVRIIFPNVQTRRLGVR 288
>gi|410932283|ref|XP_003979523.1| PREDICTED: DNA-binding protein RFX5-like, partial [Takifugu
rubripes]
Length = 198
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
T W+ + E LP+ ++ Y R+C + ++AA+FGK+IR +F ++ RRLG
Sbjct: 87 TCNWIRSHLEEHSDTCLPKQDVYETYRRYCENLQYRPLSAANFGKIIRDIFPNIKARRLG 146
Query: 148 TR 149
R
Sbjct: 147 GR 148
>gi|7406679|emb|CAB85619.1| putative RFX transcription factor [Penicillium chrysogenum]
Length = 855
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y +C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 235 WLRENCRKSSG-SVRRDRVYCCYAENCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 292
>gi|391863325|gb|EIT72636.1| RFX family transcription factor [Aspergillus oryzae 3.042]
Length = 888
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 246 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 303
>gi|327350986|gb|EGE79843.1| RfxA protein [Ajellomyces dermatitidis ATCC 18188]
Length = 880
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 249 WLRENCQKNSG-SVRRDRVYCSYAEKCGSERVSVLNPASFGKLVRIIFPNVQTRRLGVR 306
>gi|255943921|ref|XP_002562728.1| transcription factor like protein RFX-Penicillium chrysogenum
[Penicillium chrysogenum Wisconsin 54-1255]
gi|211587463|emb|CAP85498.1| transcription factor like protein RFX-Penicillium chrysogenum
[Penicillium chrysogenum Wisconsin 54-1255]
Length = 859
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y +C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 235 WLRENCRKSSG-SVRRDRVYCCYAENCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 292
>gi|425766384|gb|EKV04997.1| DNA damage and replication checkpoint protein Rfx1, putative
[Penicillium digitatum PHI26]
Length = 865
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y +C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 241 WLRENCRKSSG-SVRRDRVYCCYAENCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 298
>gi|403275978|ref|XP_003929695.1| PREDICTED: transcription factor RFX4 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 652
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 26/38 (68%)
Query: 112 HYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
HY+ C +N VNAASFGK+IR F L TRRLGTR
Sbjct: 2 HYLDFCEKNDTQPVNAASFGKIIRQQFPQLTTRRLGTR 39
>gi|325095613|gb|EGC48923.1| conserved hypothetical protein [Ajellomyces capsulatus H88]
Length = 881
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 249 WLRENCQKSFG-SVRRDRVYCSYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 306
>gi|444517440|gb|ELV11563.1| DNA-binding protein RFX8 [Tupaia chinensis]
Length = 384
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKL 133
VQWL+DN+ EG S+PR ++ Y+ C + D VN A+FGK+
Sbjct: 25 VQWLVDNFCIREGYSVPRCLMYEIYMETCGQTARDRVNPATFGKV 69
>gi|425775384|gb|EKV13657.1| DNA damage and replication checkpoint protein Rfx1, putative
[Penicillium digitatum Pd1]
Length = 865
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y +C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 241 WLRENCRKSSG-SVRRDRVYCCYAENCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 298
>gi|238503506|ref|XP_002382986.1| DNA damage and replication checkpoint protein Rfx1, putative
[Aspergillus flavus NRRL3357]
gi|220690457|gb|EED46806.1| DNA damage and replication checkpoint protein Rfx1, putative
[Aspergillus flavus NRRL3357]
Length = 854
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 212 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 269
>gi|440798614|gb|ELR19681.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 642
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 37/62 (59%), Gaps = 1/62 (1%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAV-NAASFGKLIRSVFIGLRTRRLG 147
+ WL +NY+ + S+ ++S++ HY C E ++ V +A FGKL++ F G++ R G
Sbjct: 13 ILWLRENYKVGKNGSVSKNSVYQHYFDSCQEKGIEPVISATYFGKLVKRAFPGIKYNRKG 72
Query: 148 TR 149
R
Sbjct: 73 PR 74
>gi|225557882|gb|EEH06167.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 887
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 255 WLRENCQKSFG-SVRRDRVYCSYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 312
>gi|83764924|dbj|BAE55068.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 856
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 212 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 269
>gi|115438328|ref|XP_001218038.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114188853|gb|EAU30553.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 881
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 247 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 304
>gi|260816690|ref|XP_002603221.1| hypothetical protein BRAFLDRAFT_226535 [Branchiostoma floridae]
gi|229288538|gb|EEN59232.1| hypothetical protein BRAFLDRAFT_226535 [Branchiostoma floridae]
Length = 197
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+ W+ + E SLP+ +F+ Y +C K ++ A FGK+++ F L+ RRLGT
Sbjct: 46 LHWIRSHLEVHPDTSLPKQDVFDEYKTYCDNMKYRNLSPADFGKMMKMAFPNLKARRLGT 105
Query: 149 R 149
R
Sbjct: 106 R 106
>gi|348509722|ref|XP_003442396.1| PREDICTED: DNA-binding protein RFX7-like [Oreochromis niloticus]
Length = 1407
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E SLP+ +++ Y C ++AA FGK++++VF ++ RRLG R
Sbjct: 102 WIRNHLEEYPETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRG 161
Query: 151 GWRFLSS 157
++ S
Sbjct: 162 KSKYCYS 168
>gi|121712672|ref|XP_001273947.1| DNA damage and replication checkpoint protein Rfx1, putative
[Aspergillus clavatus NRRL 1]
gi|119402100|gb|EAW12521.1| DNA damage and replication checkpoint protein Rfx1, putative
[Aspergillus clavatus NRRL 1]
Length = 885
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 248 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 305
>gi|239610064|gb|EEQ87051.1| RfxA [Ajellomyces dermatitidis ER-3]
Length = 875
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 249 WLRENCQKNSG-SVRRDRVYCSYAEKCGSERVSVLNPASFGKLVRIIFPNVQTRRLGVR 306
>gi|403415791|emb|CCM02491.1| predicted protein [Fibroporia radiculosa]
Length = 885
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 220 WLTANYSPYPDGNVPRQGLYFSYRRVCEQYSIPHINTATLGKAIRLCFPTIKTRRLGVRG 279
Query: 151 GWRF 154
++
Sbjct: 280 NSKY 283
>gi|50306605|ref|XP_453276.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642410|emb|CAH00372.1| KLLA0D04862p [Kluyveromyces lactis]
Length = 819
Score = 51.2 bits (121), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 36/59 (61%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N T + R +F Y CA+N+L ++ A+ GKLIR++F L+TRRLG R
Sbjct: 316 WLMSNCVTDTESYVRRGRIFAQYAASCAQNQLKPLSQATLGKLIRALFPFLKTRRLGMR 374
>gi|259487690|tpe|CBF86555.1| TPA: DNA damage and replication checkpoint protein Rfx1, putative
(AFU_orthologue; AFUA_5G06120) [Aspergillus nidulans
FGSC A4]
Length = 862
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 246 WLKENCRKSTG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 303
>gi|378755240|gb|EHY65267.1| hypothetical protein NERG_01713 [Nematocida sp. 1 ERTm2]
Length = 320
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL NY + S+PR ++ HY E ++ +N A FGK+I+ F +R+RRLG R
Sbjct: 8 WLNLNYAPCKDNSIPRCIIYQHYCNDFKEKGIEPLNTAMFGKVIKMAFPFIRSRRLGNR 66
>gi|410913229|ref|XP_003970091.1| PREDICTED: uncharacterized protein LOC101073839 [Takifugu rubripes]
Length = 1419
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E SLP+ +++ Y C ++AA FGK++++VF ++ RRLG R
Sbjct: 103 WIHNHLEEYPETSLPKQEVYDEYKSFCDNLNYHPLSAADFGKMMKNVFPNMKARRLGMRG 162
Query: 151 GWRFLS 156
++ S
Sbjct: 163 KSKYPS 168
>gi|70998596|ref|XP_754020.1| DNA damage and replication checkpoint protein Rfx1 [Aspergillus
fumigatus Af293]
gi|66851656|gb|EAL91982.1| DNA damage and replication checkpoint protein Rfx1, putative
[Aspergillus fumigatus Af293]
Length = 855
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 214 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 271
>gi|159126246|gb|EDP51362.1| DNA damage and replication checkpoint protein Rfx1, putative
[Aspergillus fumigatus A1163]
Length = 855
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 214 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 271
>gi|74213029|dbj|BAE41660.1| unnamed protein product [Mus musculus]
gi|148694316|gb|EDL26263.1| mCG131701, isoform CRA_b [Mus musculus]
Length = 291
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|119498531|ref|XP_001266023.1| DNA damage and replication checkpoint protein Rfx1, putative
[Neosartorya fischeri NRRL 181]
gi|119414187|gb|EAW24126.1| DNA damage and replication checkpoint protein Rfx1, putative
[Neosartorya fischeri NRRL 181]
Length = 816
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 214 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 271
>gi|67523681|ref|XP_659900.1| hypothetical protein AN2296.2 [Aspergillus nidulans FGSC A4]
gi|40745251|gb|EAA64407.1| hypothetical protein AN2296.2 [Aspergillus nidulans FGSC A4]
Length = 843
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 227 WLKENCRKSTG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 284
>gi|440791486|gb|ELR12724.1| hypothetical protein ACA1_092460 [Acanthamoeba castellanii str.
Neff]
Length = 791
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 35/62 (56%), Gaps = 3/62 (4%)
Query: 96 YETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL---GTRRGW 152
Y EG +L + +++ Y+ C EN + NAASFGK+ + VF ++ RL ++GW
Sbjct: 27 YGEKEGATLLKKNVYQAYVNFCGENNFECTNAASFGKIFKRVFPRVQMARLVVDKGKKGW 86
Query: 153 RF 154
+
Sbjct: 87 HY 88
>gi|395328868|gb|EJF61258.1| hypothetical protein DICSQDRAFT_106385 [Dichomitus squalens
LYAD-421 SS1]
Length = 876
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 217 WLTANYSPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 276
Query: 151 GWRF 154
++
Sbjct: 277 NSKY 280
>gi|353243355|emb|CCA74906.1| hypothetical protein PIIN_08876 [Piriformospora indica DSM 11827]
Length = 970
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 35/64 (54%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L++ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 267 WLNANYTPYADGNVPRQGLYSSYRRVCDQYGIPHMNTATLGKAIRLCFPAIKTRRLGVRG 326
Query: 151 GWRF 154
++
Sbjct: 327 NSKY 330
>gi|392568757|gb|EIW61931.1| hypothetical protein TRAVEDRAFT_70167 [Trametes versicolor
FP-101664 SS1]
Length = 873
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 218 WLTANYSPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 277
Query: 151 GWRF 154
++
Sbjct: 278 NSKY 281
>gi|449549740|gb|EMD40705.1| hypothetical protein CERSUDRAFT_149026 [Ceriporiopsis subvermispora
B]
Length = 872
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 221 WLTANYSPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVR 279
>gi|149028793|gb|EDL84134.1| similar to hypothetical protein FLJ12994 (predicted), isoform CRA_b
[Rattus norvegicus]
gi|165970890|gb|AAI58677.1| Rfx7 protein [Rattus norvegicus]
Length = 297
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/67 (31%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ + E SLP+ +++ Y +C ++AA FGK++++VF ++ RRLGTR
Sbjct: 111 WIRNTLEEHPETSLPKQEVYDEYKSYCDNLGYHPLSAADFGKIMKNVFPNMKARRLGTRG 170
Query: 151 GWRFLSS 157
++ S
Sbjct: 171 KSKYCYS 177
>gi|390601231|gb|EIN10625.1| hypothetical protein PUNSTDRAFT_112444 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 883
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 213 WLTANYTPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 272
Query: 151 GWRF 154
++
Sbjct: 273 NSKY 276
>gi|302696307|ref|XP_003037832.1| hypothetical protein SCHCODRAFT_71685 [Schizophyllum commune H4-8]
gi|300111529|gb|EFJ02930.1| hypothetical protein SCHCODRAFT_71685 [Schizophyllum commune H4-8]
Length = 898
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 189 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 248
Query: 151 GWRF 154
++
Sbjct: 249 NSKY 252
>gi|242793767|ref|XP_002482234.1| DNA damage and replication checkpoint protein Rfx1, putative
[Talaromyces stipitatus ATCC 10500]
gi|218718822|gb|EED18242.1| DNA damage and replication checkpoint protein Rfx1, putative
[Talaromyces stipitatus ATCC 10500]
Length = 861
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C + +N ASFGKL+R +F ++TRRLG R
Sbjct: 232 WLKENCRKSSG-SVRRDRVYCCYAERCGSEHVSVLNPASFGKLVRIIFPNVQTRRLGVR 289
>gi|409049586|gb|EKM59063.1| hypothetical protein PHACADRAFT_25186 [Phanerochaete carnosa
HHB-10118-sp]
Length = 881
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 225 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 284
Query: 151 GWRF 154
++
Sbjct: 285 NSKY 288
>gi|212535702|ref|XP_002148007.1| DNA damage and replication checkpoint protein Rfx1, putative
[Talaromyces marneffei ATCC 18224]
gi|210070406|gb|EEA24496.1| DNA damage and replication checkpoint protein Rfx1, putative
[Talaromyces marneffei ATCC 18224]
Length = 837
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C + +N ASFGKL+R +F ++TRRLG R
Sbjct: 222 WLKENCRKSSG-SVRRDRVYCCYAERCGSEHVSVLNPASFGKLVRIIFPNVQTRRLGVR 279
>gi|317138893|ref|XP_003189100.1| hypothetical protein AOR_1_1368184 [Aspergillus oryzae RIB40]
Length = 516
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 410 WLKENCRKSSG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 467
>gi|110227026|gb|ABG56532.1| RfxA [Talaromyces marneffei]
Length = 861
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C + +N ASFGKL+R +F ++TRRLG R
Sbjct: 246 WLKENCRKSSG-SVRRDRVYCCYAERCGSEHVSVLNPASFGKLVRIIFPNVQTRRLGVR 303
>gi|440798619|gb|ELR19686.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 485
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 38/62 (61%), Gaps = 1/62 (1%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLD-AVNAASFGKLIRSVFIGLRTRRLG 147
V WL +NY+ + S +++++ HY C+E ++ ++NA FGKL++ F G++ R G
Sbjct: 17 VAWLRENYKVGKSGSTSKNAVYQHYSDMCSERGIEPSINATYFGKLVKRAFPGVQYNRKG 76
Query: 148 TR 149
R
Sbjct: 77 PR 78
>gi|393215664|gb|EJD01155.1| hypothetical protein FOMMEDRAFT_169330 [Fomitiporia mediterranea
MF3/22]
Length = 921
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 245 WLNANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPAIKTRRLGVRG 304
Query: 151 GWRF 154
++
Sbjct: 305 NSKY 308
>gi|336373557|gb|EGO01895.1| hypothetical protein SERLA73DRAFT_85891 [Serpula lacrymans var.
lacrymans S7.3]
gi|336386375|gb|EGO27521.1| hypothetical protein SERLADRAFT_360220 [Serpula lacrymans var.
lacrymans S7.9]
Length = 873
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 208 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 267
Query: 151 GWRF 154
++
Sbjct: 268 NSKY 271
>gi|443718917|gb|ELU09312.1| hypothetical protein CAPTEDRAFT_199682 [Capitella teleta]
Length = 210
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 44/89 (49%), Gaps = 6/89 (6%)
Query: 61 TATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
A S LS D + + H+ + + WL YE + +PR ++++HY+ +C+
Sbjct: 124 CARSGVWKALSEDQRKA--HIEDV----LHWLSSEYEVVPKMCVPRQTVYDHYLDYCSCK 177
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+ A FG++I+ F L RRLG R
Sbjct: 178 QKPAAGITLFGRIIQKQFPHLTMRRLGGR 206
>gi|392586781|gb|EIW76116.1| hypothetical protein CONPUDRAFT_84804 [Coniophora puteana
RWD-64-598 SS2]
Length = 855
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 192 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 251
Query: 151 GWRF 154
++
Sbjct: 252 NSKY 255
>gi|258572198|ref|XP_002544861.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905131|gb|EEP79532.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 838
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 243 WLRENCRKSTG-SVRRDRVYCCYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 300
>gi|426198318|gb|EKV48244.1| hypothetical protein AGABI2DRAFT_184602 [Agaricus bisporus var.
bisporus H97]
Length = 844
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 180 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 239
Query: 151 GWRF 154
++
Sbjct: 240 NSKY 243
>gi|409079915|gb|EKM80276.1| hypothetical protein AGABI1DRAFT_120308 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 844
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 180 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 239
Query: 151 GWRF 154
++
Sbjct: 240 NSKY 243
>gi|170091806|ref|XP_001877125.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648618|gb|EDR12861.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 856
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 189 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 248
Query: 151 GWRF 154
++
Sbjct: 249 NSKY 252
>gi|303318757|ref|XP_003069378.1| Fungal specific transcription factor, putative [Coccidioides
posadasii C735 delta SOWgp]
gi|240109064|gb|EER27233.1| Fungal specific transcription factor, putative [Coccidioides
posadasii C735 delta SOWgp]
Length = 834
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 243 WLRENCRKSTG-SVRRDRVYCCYADKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 300
>gi|320034515|gb|EFW16459.1| RfxA [Coccidioides posadasii str. Silveira]
Length = 834
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 243 WLRENCRKSTG-SVRRDRVYCCYADKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 300
>gi|190348270|gb|EDK40694.2| hypothetical protein PGUG_04792 [Meyerozyma guilliermondii ATCC
6260]
Length = 756
Score = 50.1 bits (118), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ E + +PR+ ++ Y++ CA L + + GKL++ +F GLR RRLG R
Sbjct: 249 WLLGVCEVSSTAVVPRNRVYARYVQSCANFGLVPITPTNMGKLVKLMFPGLRIRRLGVR 307
>gi|440793985|gb|ELR15156.1| hypothetical protein ACA1_217180 [Acanthamoeba castellanii str.
Neff]
Length = 645
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 1/53 (1%)
Query: 99 AEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
A G +LP+ ++ Y+ C +++L+A NA +FGK++R VF + +RRLG RRG
Sbjct: 2 APGHALPKREVYGDYLAFCRDHQLEATNAPAFGKILRMVFPDITSRRLG-RRG 53
>gi|392864983|gb|EAS30719.2| hypothetical protein CIMG_05985 [Coccidioides immitis RS]
Length = 834
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 243 WLRENCRKSTG-SVRRDRVYCCYADKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 300
>gi|146413733|ref|XP_001482837.1| hypothetical protein PGUG_04792 [Meyerozyma guilliermondii ATCC
6260]
Length = 756
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ E + +PR+ ++ Y++ CA L + + GKL++ +F GLR RRLG R
Sbjct: 249 WLLGVCEVSSTAVVPRNRVYARYVQSCANFGLVPITPTNMGKLVKLMFPGLRIRRLGVR 307
>gi|119181813|ref|XP_001242089.1| hypothetical protein CIMG_05985 [Coccidioides immitis RS]
Length = 896
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + G S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 305 WLRENCRKSTG-SVRRDRVYCCYADKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 362
>gi|134085431|ref|NP_001076812.1| regulatory factor X, 5 (influences HLA class II expression)
[Xenopus (Silurana) tropicalis]
gi|134024343|gb|AAI35605.1| rfx5 protein [Xenopus (Silurana) tropicalis]
Length = 564
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E LP+ +++ Y R+C ++ A+FGK+IR +F ++ RRLG R
Sbjct: 88 WIRNHLEEHTDTCLPKQDVYDAYKRYCDNLHGRPLSVANFGKIIREIFPNIKARRLGGRG 147
Query: 151 GWRFLSS 157
++ S
Sbjct: 148 QSKYCYS 154
>gi|389747260|gb|EIM88439.1| hypothetical protein STEHIDRAFT_120609 [Stereum hirsutum FP-91666
SS1]
Length = 880
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
WL NY ++PR L+ Y R C + + +N A+ GK IR F ++TRRLG R
Sbjct: 218 WLTANYAPYPDGNVPRQGLYFSYRRVCDQYGIPHINTATLGKAIRLCFPTIKTRRLGVRG 277
Query: 151 GWRF 154
++
Sbjct: 278 NSKY 281
>gi|440792071|gb|ELR13299.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 456
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 36/63 (57%), Gaps = 2/63 (3%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDA--VNAASFGKLIRSVFIGLRTRRL 146
V WL ++Y E S+ +S ++ HY+ C E+ ++ ++ FGKL+R F G++ R
Sbjct: 39 VIWLKEHYRVGEAGSMRKSFVYQHYLDACRESGMEGAPISHTFFGKLVRRAFPGIKCNRK 98
Query: 147 GTR 149
G R
Sbjct: 99 GPR 101
>gi|353230383|emb|CCD76554.1| putative rfx5 [Schistosoma mansoni]
Length = 1109
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 70 LSPDNQASLSHVTKISPATVQ-WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
SP Q+SL ++ + W++ + E L + +++ Y +C ++ + +N A
Sbjct: 96 FSPGGQSSLHLSNQVEQSQAYTWIMSHLEEDPSTCLRKDEVYDDYRAYCEKHHMKTLNTA 155
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRFL 155
FGK+++ F ++ RRLG R R+
Sbjct: 156 DFGKVMKRAFPNVKPRRLGQRGQSRYC 182
>gi|363742881|ref|XP_003642726.1| PREDICTED: DNA-binding protein RFX5-like [Gallus gallus]
Length = 553
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 38/67 (56%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E LP+ +++ Y ++C ++AA+FGK+IR +F ++ RRLG R
Sbjct: 97 WIRNHLEEHADTCLPKQDVYDAYRQYCDNLCCRPLSAANFGKIIREIFPNIKARRLGGRG 156
Query: 151 GWRFLSS 157
++ S
Sbjct: 157 QSKYCYS 163
>gi|256078217|ref|XP_002575393.1| rfx5 [Schistosoma mansoni]
Length = 1109
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 1/87 (1%)
Query: 70 LSPDNQASLSHVTKISPATVQ-WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAA 128
SP Q+SL ++ + W++ + E L + +++ Y +C ++ + +N A
Sbjct: 96 FSPGGQSSLHLSNQVEQSQAYTWIMSHLEEDPSTCLRKDEVYDDYRAYCEKHHMKTLNTA 155
Query: 129 SFGKLIRSVFIGLRTRRLGTRRGWRFL 155
FGK+++ F ++ RRLG R R+
Sbjct: 156 DFGKVMKRAFPNVKPRRLGQRGQSRYC 182
>gi|40675343|gb|AAH64876.1| rfx5 protein [Xenopus (Silurana) tropicalis]
Length = 557
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 37/67 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W+ ++ E LP+ +++ Y R+C ++ A+FGK+IR +F ++ RRLG R
Sbjct: 129 WIRNHLEEHTDTCLPKQDVYDAYKRYCDNLHGRPLSVANFGKIIREIFPNIKARRLGGRG 188
Query: 151 GWRFLSS 157
++ S
Sbjct: 189 QSKYCYS 195
>gi|225678373|gb|EEH16657.1| RFX family DNA-binding protein [Paracoccidioides brasiliensis Pb03]
Length = 830
Score = 49.3 bits (116), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL +N + + S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 182 WLRENCQKSTK-SVRRDRVYCSYAEQCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 239
>gi|363742931|ref|XP_003642746.1| PREDICTED: DNA-binding protein RFX5-like [Gallus gallus]
Length = 557
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 38/69 (55%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
W+ ++ E LP+ +++ Y ++C ++AA+FGK+IR +F ++ RRLG
Sbjct: 94 CNWIRNHLEEHADTCLPKQDVYDAYRQYCDNLCCRPLSAANFGKIIREIFPNIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|50285509|ref|XP_445183.1| hypothetical protein [Candida glabrata CBS 138]
gi|49524486|emb|CAG58083.1| unnamed protein product [Candida glabrata]
Length = 627
Score = 48.9 bits (115), Expect = 8e-04, Method: Composition-based stats.
Identities = 24/60 (40%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 91 WLIDNYETAEGVS-LPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL+ N ++ S +PR +F Y C + L ++ A+ GKLIR++F L+TRRLG R
Sbjct: 158 WLLQNCSNSDPNSFVPRGLIFEQYSIACRQFDLKPLSQATLGKLIRTIFSNLKTRRLGMR 217
>gi|440793075|gb|ELR14270.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 734
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 39/65 (60%), Gaps = 5/65 (7%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+ WL DNYE +G ++ ++++F Y AE+ L V + FGKL+++VF +RT R G
Sbjct: 21 LNWLEDNYECKKGATICKAAVFTDY----AES-LKPVTNSLFGKLVKAVFPAIRTCRKGP 75
Query: 149 RRGWR 153
R R
Sbjct: 76 RSDSR 80
>gi|326933520|ref|XP_003212850.1| PREDICTED: DNA-binding protein RFX5-like [Meleagris gallopavo]
Length = 304
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ ++ E LP+ +++ Y ++C ++AA+FGK+IR +F ++ RRLG R
Sbjct: 97 WIRNHLEEHADTCLPKQDVYDAYRQYCDNLCCHPLSAANFGKIIREIFPNIKARRLGGR 155
>gi|388581948|gb|EIM22254.1| hypothetical protein WALSEDRAFT_63463 [Wallemia sebi CBS 633.66]
Length = 422
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+ WL D+Y E S+PR +F Y +C N L+++++ SFGKL+ F GL+ +R+G
Sbjct: 54 IAWLTDSYIPCEEASVPRQRMFQSYHDYCESNSLESLSSRSFGKLVIKQFPGLKIKRIGK 113
Query: 149 R 149
R
Sbjct: 114 R 114
>gi|440791449|gb|ELR12687.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 241
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 36/66 (54%), Gaps = 2/66 (3%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
V+ L+D Y+ G +P+ +++ Y CA + + +SFGK+ + VF + +RL
Sbjct: 18 VRRLLDTYKVVPGAMVPKKQVYDAYRAFCASCDFEPSDVSSFGKIFKRVFPDVERKRL-- 75
Query: 149 RRGWRF 154
+GW +
Sbjct: 76 VKGWHY 81
>gi|355565948|gb|EHH22377.1| hypothetical protein EGK_05623, partial [Macaca mulatta]
Length = 153
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 109 LFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
++ Y+ C +N + VN A+FGKL+R VF L TRRLGTR R+
Sbjct: 1 MYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTRRLGTRGSARY 46
>gi|440795649|gb|ELR16766.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 544
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
V WL NY S+ + +F HYI C N++ +AASFGK+++ F ++ R+G
Sbjct: 18 VAWLRVNYCLRASGSIAKRDVFVHYIELCRANRIQPSSAASFGKILKMAFPTVKCNRVGP 77
Query: 149 R 149
R
Sbjct: 78 R 78
>gi|440802963|gb|ELR23877.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 359
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 35/64 (54%), Gaps = 1/64 (1%)
Query: 87 ATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF-GKLIRSVFIGLRTRR 145
A VQWL DNY S+ + ++ HY+ C + + + +F GKL+R F G+++ R
Sbjct: 34 AVVQWLRDNYTINSAGSVSKCEVYAHYLDMCRQKGVTFPMSRTFYGKLVRRAFPGIKSNR 93
Query: 146 LGTR 149
G R
Sbjct: 94 KGPR 97
>gi|148226027|ref|NP_001084673.1| regulatory factor X, 5 (influences HLA class II expression)
[Xenopus laevis]
gi|46249554|gb|AAH68779.1| MGC81309 protein [Xenopus laevis]
Length = 254
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ ++ E LP+ +++ Y R+C ++ A+FGK+IR +F ++ RRLG R
Sbjct: 88 WIRNHLEEHTDTCLPKQDVYDAYKRYCDNLHGRPLSVANFGKIIREIFPNIKARRLGGR 146
>gi|440790130|gb|ELR11417.1| RFX DNA-binding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1171
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+WL +Y +G S+ + ++ Y+ +C ++ ++ GK+ R VF + TRRLG+R
Sbjct: 649 EWLKSSYAEVQGQSVAKKMVYKDYLAYCNRVGIEPTTSSVLGKIFREVFPFVNTRRLGSR 708
>gi|355751535|gb|EHH55790.1| hypothetical protein EGM_05060, partial [Macaca fascicularis]
Length = 153
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/46 (47%), Positives = 30/46 (65%)
Query: 109 LFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
++ Y+ C +N + VN A+FGKL+R VF L TRRLGTR R+
Sbjct: 1 MYEIYMETCGQNTENQVNPATFGKLVRLVFPDLGTRRLGTRGSARY 46
>gi|432114331|gb|ELK36259.1| DNA-binding protein RFX5 [Myotis davidii]
Length = 621
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 65 NTGD----PLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAEN 120
+TGD P +P+N+ + +W+ ++ E LP+ S+++ Y ++C
Sbjct: 73 STGDKSSEPSTPNNEEYMY--------ACKWIRNHLEEHTDTCLPKQSVYDAYRKYCESL 124
Query: 121 KL-DAVNAASFGKLIRSVFIGLRTRRLGTRRGWRFLSS 157
++ A+FGK+IR +F ++ RRLG R ++ S
Sbjct: 125 AFCRPLSTANFGKIIREIFPDIKARRLGGRGQSKYCYS 162
>gi|358341453|dbj|GAA32555.2| DNA-binding protein RFX7 [Clonorchis sinensis]
Length = 1076
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 34/65 (52%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRR 150
W++ + E L + ++ Y +C ++ + +N A FGK+++ F ++ RRLG R
Sbjct: 123 WIMSHLEEHPSTCLRKDEVYEDYRAYCDKHHMKTLNTADFGKVMKRAFPNVKPRRLGQRG 182
Query: 151 GWRFL 155
R+
Sbjct: 183 QSRYC 187
>gi|440795684|gb|ELR16801.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 666
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 19/65 (29%), Positives = 35/65 (53%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTR 144
+P + WL +N+E G SL + ++ Y+ C + D + + FGK++ F GL++
Sbjct: 140 APRLLAWLRENFEAVRGTSLAKDEVYGEYLTFCQADGKDPMLPSMFGKMVHRAFPGLKSS 199
Query: 145 RLGTR 149
R G +
Sbjct: 200 RTGAK 204
>gi|260940541|ref|XP_002614570.1| hypothetical protein CLUG_05348 [Clavispora lusitaniae ATCC 42720]
gi|238851756|gb|EEQ41220.1| hypothetical protein CLUG_05348 [Clavispora lusitaniae ATCC 42720]
Length = 687
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 33/59 (55%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
W+ + E A +PR+ ++ Y++ CA+ L + A FG+L+R + L RRLG R
Sbjct: 173 WIQRSCEHAPAAVVPRTRVYARYVQRCADLALHPLAPALFGRLVRVAYPNLTIRRLGVR 231
>gi|154271500|ref|XP_001536603.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409273|gb|EDN04723.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 841
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 103 SLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
S+ R ++ Y C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 252 SVRRDRVYCSYAEKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 298
>gi|440796246|gb|ELR17355.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 553
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
V WL NY E S+ + +F HY C N + +AA+FGK+++ F ++ R+G
Sbjct: 18 VAWLRVNYCLRECGSIAKCEVFLHYTELCHANTIQPSSAAAFGKILKMAFPTVKCNRVGP 77
Query: 149 R 149
R
Sbjct: 78 R 78
>gi|348586563|ref|XP_003479038.1| PREDICTED: DNA-binding protein RFX5-like [Cavia porcellus]
Length = 636
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|440799776|gb|ELR20819.1| RFX DNA-binding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 966
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 35/66 (53%), Gaps = 1/66 (1%)
Query: 84 ISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRT 143
I P QW+ + Y EG + R+ + N Y C + + A+FGK+++++F
Sbjct: 32 IPPEVRQWMQETYVKGEG-EIDRAEMHNRYRAFCESRGIPPKDLANFGKIVKNLFPDAGY 90
Query: 144 RRLGTR 149
RRLG+R
Sbjct: 91 RRLGSR 96
>gi|190344043|gb|ACE75820.1| hypothetical protein [Sorex araneus]
Length = 611
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 KWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|410968344|ref|XP_003990667.1| PREDICTED: DNA-binding protein RFX5 [Felis catus]
Length = 621
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|417403308|gb|JAA48465.1| Putative rfx family transcription factor [Desmodus rotundus]
Length = 611
Score = 46.2 bits (108), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|329664492|ref|NP_001192655.1| DNA-binding protein RFX5 [Bos taurus]
gi|296489603|tpg|DAA31716.1| TPA: regulatory factor X, 5 (influences HLA class II expression)
[Bos taurus]
Length = 615
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|351694443|gb|EHA97361.1| DNA-binding protein RFX5 [Heterocephalus glaber]
Length = 632
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|440906736|gb|ELR56965.1| DNA-binding protein RFX5 [Bos grunniens mutus]
Length = 613
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|403294287|ref|XP_003938128.1| PREDICTED: LOW QUALITY PROTEIN: DNA-binding protein RFX8 [Saimiri
boliviensis boliviensis]
Length = 714
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 20/50 (40%), Positives = 30/50 (60%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
S VQ L+DN+ EG S+P ++ Y+ C +N + VN A+FGKL+
Sbjct: 10 SSGIVQCLVDNFCVHEGCSVPPCLMYEIYVESCGQNAENQVNLATFGKLV 59
>gi|149751255|ref|XP_001492313.1| PREDICTED: DNA-binding protein RFX5 [Equus caballus]
Length = 606
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|7716046|gb|AAF68260.1| regulator factor X 5 [Mus musculus]
gi|111600343|gb|AAI18949.1| Regulatory factor X, 5 (influences HLA class II expression) [Mus
musculus]
gi|111600347|gb|AAI18950.1| Regulatory factor X, 5 (influences HLA class II expression) [Mus
musculus]
Length = 658
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 93 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 152
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 153 RGQSKYCYS 161
>gi|311254332|ref|XP_003125814.1| PREDICTED: DNA-binding protein RFX5 [Sus scrofa]
Length = 619
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|426216576|ref|XP_004002537.1| PREDICTED: DNA-binding protein RFX5 isoform 1 [Ovis aries]
Length = 617
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|71037397|ref|NP_059091.2| DNA-binding protein Rfx5 [Mus musculus]
gi|408407922|sp|Q9JL61.2|RFX5_MOUSE RecName: Full=DNA-binding protein Rfx5; AltName: Full=Regulatory
factor X 5
gi|148706809|gb|EDL38756.1| mCG13706, isoform CRA_a [Mus musculus]
Length = 658
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 93 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 152
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 153 RGQSKYCYS 161
>gi|354472993|ref|XP_003498721.1| PREDICTED: hypothetical protein LOC100770896 [Cricetulus griseus]
gi|344238735|gb|EGV94838.1| DNA-binding protein RFX5 [Cricetulus griseus]
Length = 657
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 93 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 152
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 153 RGQSKYCYS 161
>gi|183637590|gb|ACC64592.1| regulatory factor X, 5, isoform 2 (predicted) [Rhinolophus
ferrumequinum]
Length = 606
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|148706811|gb|EDL38758.1| mCG13706, isoform CRA_c [Mus musculus]
Length = 633
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 68 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 127
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 128 RGQSKYCYS 136
>gi|297663658|ref|XP_002810287.1| PREDICTED: DNA-binding protein RFX5 isoform 2 [Pongo abelii]
Length = 616
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|355716246|gb|AES05552.1| regulatory factor X, 5 [Mustela putorius furo]
Length = 615
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|112180595|gb|AAH51965.1| Rfx5 protein [Mus musculus]
Length = 570
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 5 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 64
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 65 RGQSKYCYS 73
>gi|225719952|gb|ACO15809.1| regulatory factor X, 5, isoform 2 (predicted) [Dasypus
novemcinctus]
Length = 612
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEKHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|355558422|gb|EHH15202.1| hypothetical protein EGK_01260 [Macaca mulatta]
Length = 627
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 101 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 160
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 161 RGQSKYCYS 169
>gi|157821255|ref|NP_001101164.1| DNA-binding protein RFX5 [Rattus norvegicus]
gi|149030729|gb|EDL85766.1| regulatory factor X, 5 (influences HLA class II expression)
(predicted) [Rattus norvegicus]
Length = 681
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 93 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 152
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 153 RGQSKYCYS 161
>gi|4557843|ref|NP_000440.1| DNA-binding protein RFX5 [Homo sapiens]
gi|71040090|ref|NP_001020774.1| DNA-binding protein RFX5 [Homo sapiens]
gi|1350587|sp|P48382.1|RFX5_HUMAN RecName: Full=DNA-binding protein RFX5; AltName: Full=Regulatory
factor X 5
gi|840789|emb|CAA59771.1| binding regulatory factor [Homo sapiens]
gi|17028337|gb|AAH17471.1| Regulatory factor X, 5 (influences HLA class II expression) [Homo
sapiens]
gi|119573831|gb|EAW53446.1| regulatory factor X, 5 (influences HLA class II expression),
isoform CRA_a [Homo sapiens]
gi|119573832|gb|EAW53447.1| regulatory factor X, 5 (influences HLA class II expression),
isoform CRA_a [Homo sapiens]
gi|119573833|gb|EAW53448.1| regulatory factor X, 5 (influences HLA class II expression),
isoform CRA_a [Homo sapiens]
gi|123983134|gb|ABM83308.1| regulatory factor X, 5 (influences HLA class II expression)
[synthetic construct]
gi|123997837|gb|ABM86520.1| regulatory factor X, 5 (influences HLA class II expression)
[synthetic construct]
gi|208967272|dbj|BAG73650.1| regulatory factor X, 5 [synthetic construct]
Length = 616
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|284005421|ref|NP_001164962.1| DNA-binding protein RFX5 [Oryctolagus cuniculus]
gi|217030856|gb|ACJ74018.1| regulatory factor X, 5, isoform 1 (predicted) [Oryctolagus
cuniculus]
Length = 615
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|169410924|gb|ACA57934.1| regulatory factor X, 5, isoform 1 (predicted) [Callicebus moloch]
Length = 620
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|332810259|ref|XP_513794.2| PREDICTED: DNA-binding protein RFX5 isoform 7 [Pan troglodytes]
gi|410209110|gb|JAA01774.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
gi|410209112|gb|JAA01775.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
gi|410258362|gb|JAA17148.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
gi|410298970|gb|JAA28085.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
gi|410298972|gb|JAA28086.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
gi|410346006|gb|JAA40672.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
gi|410346008|gb|JAA40673.1| regulatory factor X, 5 (influences HLA class II expression) [Pan
troglodytes]
Length = 616
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|332220264|ref|XP_003259277.1| PREDICTED: DNA-binding protein RFX5 isoform 1 [Nomascus leucogenys]
Length = 616
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|426331422|ref|XP_004026680.1| PREDICTED: DNA-binding protein RFX5 isoform 1 [Gorilla gorilla
gorilla]
Length = 616
Score = 45.8 bits (107), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|189055332|dbj|BAG35216.1| unnamed protein product [Homo sapiens]
Length = 616
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|281182430|ref|NP_001162544.1| DNA-binding protein RFX5 [Papio anubis]
gi|163781020|gb|ABY40796.1| regulatory factor X, 5, isoform 2 (predicted) [Papio anubis]
Length = 621
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|62898784|dbj|BAD97246.1| regulatory factor X, 5 variant [Homo sapiens]
Length = 616
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|388454378|ref|NP_001253613.1| DNA-binding protein RFX5 [Macaca mulatta]
gi|355758206|gb|EHH61443.1| hypothetical protein EGM_19905 [Macaca fascicularis]
gi|380815330|gb|AFE79539.1| DNA-binding protein RFX5 [Macaca mulatta]
gi|383420513|gb|AFH33470.1| DNA-binding protein RFX5 [Macaca mulatta]
gi|383420515|gb|AFH33471.1| DNA-binding protein RFX5 [Macaca mulatta]
gi|384948618|gb|AFI37914.1| DNA-binding protein RFX5 [Macaca mulatta]
Length = 620
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|431896641|gb|ELK06053.1| DNA-binding protein RFX5 [Pteropus alecto]
Length = 612
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|67967906|dbj|BAE00435.1| unnamed protein product [Macaca fascicularis]
Length = 620
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|397492796|ref|XP_003817306.1| PREDICTED: DNA-binding protein RFX5 isoform 1 [Pan paniscus]
Length = 618
Score = 45.4 bits (106), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|444515078|gb|ELV10740.1| DNA-binding protein RFX5 [Tupaia chinensis]
Length = 462
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 70 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 129
Query: 149 R 149
R
Sbjct: 130 R 130
>gi|403302690|ref|XP_003941986.1| PREDICTED: DNA-binding protein RFX5 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 618
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|296228785|ref|XP_002759957.1| PREDICTED: DNA-binding protein RFX5 [Callithrix jacchus]
gi|166092114|gb|ABY82094.1| regulatory factor X, 5, isoform 1 (predicted) [Callithrix jacchus]
Length = 618
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|55726074|emb|CAH89811.1| hypothetical protein [Pongo abelii]
Length = 597
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 RRGWRFLSS 157
R ++ S
Sbjct: 154 RGQSKYCYS 162
>gi|440798917|gb|ELR19978.1| hypothetical protein ACA1_112830 [Acanthamoeba castellanii str.
Neff]
Length = 544
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 28/56 (50%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRL 146
WL +N+E G L R ++ Y+ HC + A F KL + F G+ TRRL
Sbjct: 14 WLTNNFEERFGSILSREEAYDPYVAHCERMHYEHTTLAVFAKLFKEAFPGVLTRRL 69
>gi|327288722|ref|XP_003229075.1| PREDICTED: hypothetical protein LOC100556550 [Anolis carolinensis]
Length = 669
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 24/85 (28%), Positives = 44/85 (51%), Gaps = 4/85 (4%)
Query: 69 PLSPDNQASLSHVTKISPA----TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDA 124
P P + +T +S A W+ ++ E LP+ +++ Y R+C +
Sbjct: 72 PSGPSSGEKSLDLTSLSSAEHMHACTWIQNHLEEYPDTCLPKQDVYDAYKRYCDNLCCRS 131
Query: 125 VNAASFGKLIRSVFIGLRTRRLGTR 149
++AA+FGK++R +F ++ RRLG R
Sbjct: 132 LSAANFGKIMREIFPNIKARRLGGR 156
>gi|149046294|gb|EDL99187.1| similar to regulatory factor X domain containing 1 (predicted)
[Rattus norvegicus]
Length = 79
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 30/46 (65%)
Query: 109 LFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
++ Y+ C ++ + VN A+FGKL+R VF L TRRLGTR R+
Sbjct: 1 MYEIYVETCGQSAQNQVNPATFGKLVRLVFPDLGTRRLGTRGSARY 46
>gi|440800312|gb|ELR21351.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 533
Score = 44.7 bits (104), Expect = 0.012, Method: Composition-based stats.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 85 SPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAAS-FGKLIRSVFIGLRT 143
+PA + WL +NY+ + + ++ ++ HY CAE +V + + FGKL++ F G++
Sbjct: 12 APAVIAWLRENYKLGKQGHMEKAGVYQHYNDACAERNCRSVMSPTYFGKLVKRAFPGIKD 71
Query: 144 RRLGTR 149
R G R
Sbjct: 72 VRKGPR 77
>gi|443690573|gb|ELT92673.1| hypothetical protein CAPTEDRAFT_131555, partial [Capitella teleta]
Length = 209
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/79 (26%), Positives = 39/79 (49%), Gaps = 5/79 (6%)
Query: 84 ISPATVQ-----WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
++P T Q W+ + E +P+S +++ Y C +K +N F +L+++ F
Sbjct: 32 LAPKTEQMHAETWIRSHLEEDPDTCMPKSEIYDDYKMFCERHKNKWLNIGDFNRLLKATF 91
Query: 139 IGLRTRRLGTRRGWRFLSS 157
++ RRLG R R+ S
Sbjct: 92 PQVKARRLGNRGQSRYCFS 110
>gi|49900129|gb|AAH75717.1| Rfx5 protein [Mus musculus]
Length = 303
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 93 RWIRNHLEEHMDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 152
Query: 149 R 149
R
Sbjct: 153 R 153
>gi|51971307|dbj|BAD44692.1| transcription factor dRFX2 [Drosophila melanogaster]
Length = 841
Score = 44.7 bits (104), Expect = 0.014, Method: Composition-based stats.
Identities = 19/63 (30%), Positives = 37/63 (58%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRG 151
LI ++ + PR+ ++ Y+ +C E+++ + A+FGKL++ ++TRRLG R
Sbjct: 392 LIKTFKISANAVCPRNIVYLKYVENCKEHQISPICNAAFGKLVKIFHPDIKTRRLGVRGS 451
Query: 152 WRF 154
R+
Sbjct: 452 SRY 454
>gi|240274002|gb|EER37520.1| DNA damage and replication checkpoint protein Rfx1 [Ajellomyces
capsulatus H143]
Length = 558
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/36 (47%), Positives = 25/36 (69%)
Query: 114 IRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+R C ++ +N ASFGKL+R +F ++TRRLG R
Sbjct: 1 MRKCGTERVSVLNPASFGKLVRIIFPNVQTRRLGVR 36
>gi|47077060|dbj|BAD18461.1| unnamed protein product [Homo sapiens]
Length = 153
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 109 LFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
++ Y+ C +N + VN A+FGKL+R VF L TR LGTR R+
Sbjct: 1 MYEIYVETCGQNTENQVNPATFGKLVRLVFPDLGTRWLGTRGSARY 46
>gi|449664848|ref|XP_002167798.2| PREDICTED: DNA-binding protein RFX7-like [Hydra magnipapillata]
Length = 345
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 20/75 (26%), Positives = 40/75 (53%), Gaps = 1/75 (1%)
Query: 76 ASLSHVTKISPATVQWLIDNYE-TAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLI 134
+LS+ + QW+ +N E T +++P+ ++ Y + + + A FGK++
Sbjct: 100 CNLSNNKEDQTQAFQWIRNNLEETDSNINIPKYEVYEKYKTYSELQGTNYLAAPDFGKIV 159
Query: 135 RSVFIGLRTRRLGTR 149
+ +F ++ RRLGTR
Sbjct: 160 KCIFPNVKARRLGTR 174
>gi|440800026|gb|ELR21069.1| hypothetical protein ACA1_282340 [Acanthamoeba castellanii str.
Neff]
Length = 641
Score = 42.7 bits (99), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 21/62 (33%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAAS-FGKLIRSVFIGLRTRRLG 147
V WL +NY SL + ++ Y+ NK D V + FGKL++ F +R R G
Sbjct: 19 VFWLRENYRLGRSGSLAKEEVYGDYLNSMEPNKTDPVIVPTYFGKLVKKAFPSVRCNRKG 78
Query: 148 TR 149
R
Sbjct: 79 PR 80
>gi|67968387|dbj|BAE00555.1| unnamed protein product [Macaca fascicularis]
Length = 703
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 17/19 (89%), Positives = 19/19 (100%)
Query: 131 GKLIRSVFIGLRTRRLGTR 149
GKLIRS+F+GLRTRRLGTR
Sbjct: 180 GKLIRSIFMGLRTRRLGTR 198
>gi|440801157|gb|ELR22179.1| hypothetical protein ACA1_126290 [Acanthamoeba castellanii str.
Neff]
Length = 537
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAAS-FGKLIRSVFIGLRTRRLGTR 149
WL NY+ + + +S+++N Y+ C E + + + FGKL++ F G+++ R G R
Sbjct: 19 WLKLNYKLGKQGHMAKSTIYNDYLELCEERGAKPIISPTFFGKLVKRAFPGIQSVRKGPR 78
>gi|440799650|gb|ELR20694.1| hypothetical protein ACA1_054400 [Acanthamoeba castellanii str.
Neff]
Length = 381
Score = 42.0 bits (97), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 106 RSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
+ +F Y+R C + + A+ FGKL+ F GLR+ RLG R
Sbjct: 3 KEEIFADYLRMCENDHKAPLMASMFGKLVHRAFPGLRSSRLGAR 46
>gi|440804184|gb|ELR25061.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 372
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 1/62 (1%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRRLG 147
V WL +NY SL + S++NHY+ + K ++ FGKL++ F ++ R G
Sbjct: 30 VFWLRENYMVGTSGSLSKRSVYNHYLNVTKQVTKKPLISPTFFGKLVKRAFPSIKCNRKG 89
Query: 148 TR 149
R
Sbjct: 90 PR 91
>gi|156385158|ref|XP_001633498.1| predicted protein [Nematostella vectensis]
gi|156220569|gb|EDO41435.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 41.2 bits (95), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 44/98 (44%), Gaps = 2/98 (2%)
Query: 62 ATSNTGDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVS-LPRSSLFNHYIRHCAEN 120
+ S T D + +S W+ + E + S LP+ +++ Y +C
Sbjct: 22 SCSETKDEFEQNQGLPISTTRAEQTQAFHWIRCHLEECDNSSTLPKHEVYDEYKAYCESM 81
Query: 121 KLD-AVNAASFGKLIRSVFIGLRTRRLGTRRGWRFLSS 157
++A FGK+I+ VF ++ RRLGTR ++ S
Sbjct: 82 SASRTLSAPDFGKIIKCVFPRVKARRLGTRGNSKYCYS 119
>gi|395536015|ref|XP_003770016.1| PREDICTED: DNA-binding protein RFX5 [Sarcophilus harrisii]
Length = 597
Score = 40.8 bits (94), Expect = 0.18, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL-DAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ +++ Y R+C ++ A+FGK+IR +F ++ RRLG
Sbjct: 93 RWIRNHLEEHTATCLPKQDVYDAYRRYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 152
Query: 149 R 149
R
Sbjct: 153 R 153
>gi|126313832|ref|XP_001371486.1| PREDICTED: DNA-binding protein RFX5 [Monodelphis domestica]
Length = 604
Score = 40.8 bits (94), Expect = 0.19, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL-DAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ +++ Y R+C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTATCLPKQDVYDAYRRYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|320583560|gb|EFW97773.1| hypothetical protein HPODL_0403 [Ogataea parapolymorpha DL-1]
Length = 807
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 26/38 (68%)
Query: 117 CAENKLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWRF 154
C + + V ASFGKL++++F G++TRRLG R R+
Sbjct: 406 CQQYGVQPVVNASFGKLVKALFPGIKTRRLGIRGSSRY 443
>gi|241042425|ref|XP_002407060.1| rfx5, putative [Ixodes scapularis]
gi|215492094|gb|EEC01735.1| rfx5, putative [Ixodes scapularis]
Length = 1107
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 7/72 (9%)
Query: 67 GDPLSPDNQASLSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVN 126
G+PL A ++ T W+ + E VSLP+ ++ Y +NK++ +
Sbjct: 93 GNPLGKKADAEVAQ-------TYTWIQSHLEEDSEVSLPKQEVYEEYRGFFEKNKIEPLC 145
Query: 127 AASFGKLIRSVF 138
AA FGK+++ VF
Sbjct: 146 AADFGKVMKHVF 157
>gi|395855983|ref|XP_003800422.1| PREDICTED: DNA-binding protein RFX5 isoform 1 [Otolemur garnettii]
gi|196475698|gb|ACG76407.1| regulatory factor X, 5, isoform 1 (predicted) [Otolemur garnettii]
Length = 610
Score = 40.4 bits (93), Expect = 0.23, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL-DAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|73981414|ref|XP_850613.1| PREDICTED: DNA-binding protein RFX5 isoform 2 [Canis lupus
familiaris]
Length = 619
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL-DAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|301767898|ref|XP_002919383.1| PREDICTED: DNA-binding protein RFX5-like [Ailuropoda melanoleuca]
gi|281352871|gb|EFB28455.1| hypothetical protein PANDA_007988 [Ailuropoda melanoleuca]
Length = 618
Score = 40.4 bits (93), Expect = 0.28, Method: Composition-based stats.
Identities = 19/61 (31%), Positives = 36/61 (59%), Gaps = 1/61 (1%)
Query: 90 QWLIDNYETAEGVSLPRSSLFNHYIRHCAENKL-DAVNAASFGKLIRSVFIGLRTRRLGT 148
+W+ ++ E LP+ S+++ Y ++C ++ A+FGK+IR +F ++ RRLG
Sbjct: 94 RWIRNHLEEHTDTCLPKQSVYDAYRKYCESLACCRPLSTANFGKIIREIFPDIKARRLGG 153
Query: 149 R 149
R
Sbjct: 154 R 154
>gi|440802828|gb|ELR23754.1| RFX DNA-binding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 297
Score = 40.4 bits (93), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 92 LIDNYETAEGVSLPRSSLFNHYIRHCAENKL-DAVNAASFGKLIRSVFIGLRTRRLGTR 149
L +NY+ A S+ + S+F HY+ C + ++ FGKL+R F +R R G R
Sbjct: 40 LRENYKHATTTSVSKRSVFAHYLEACKRQSVATPISHTYFGKLVRKAFPDVRCNRKGPR 98
>gi|307185791|gb|EFN71661.1| Regulatory factor X domain-containing protein 2 [Camponotus
floridanus]
Length = 1183
Score = 40.0 bits (92), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIR 135
T+ W+ + E VSLP+ +++ Y +C N + ++ A FGK+++
Sbjct: 184 TIMWIKTHLEEDPDVSLPKQEVYDEYNIYCIRNSMKPLSTADFGKVMK 231
>gi|440804205|gb|ELR25082.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 381
Score = 40.0 bits (92), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 17/59 (28%), Positives = 28/59 (47%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
WL Y T SLP+ ++ Y+ C + + ++ A GK++ F + RLG R
Sbjct: 50 WLKSAYSTDNKGSLPKEDVYVDYLNFCVMSDKEPLSKAMLGKILHQAFPNIACNRLGPR 108
>gi|432942120|ref|XP_004082969.1| PREDICTED: AT-rich interactive domain-containing protein 2-like
[Oryzias latipes]
Length = 1520
Score = 40.0 bits (92), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRR 145
T+QWL ++ET S+ RS +++ Y+ C++ + + +N+ F K +R+VF RR
Sbjct: 462 TLQWLNAHFETNSEGSVSRSEMYSEYLSTCSKMGRSNILNSTGFLKCLRTVFPNHTMRR 520
>gi|254570339|ref|XP_002492279.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032077|emb|CAY69999.1| Hypothetical protein PAS_chr3_0071 [Komagataella pastoris GS115]
gi|328353714|emb|CCA40112.1| DNA-binding protein RFX6 [Komagataella pastoris CBS 7435]
Length = 709
Score = 39.7 bits (91), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 95 NYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLGTR 149
N T+ S+PR ++ Y R ++ ++S GKL+R F G++T+RLGTR
Sbjct: 271 NRSTSLIASVPRVHVYATYHRLTESCHVEPFGSSSLGKLLRITFSGIQTKRLGTR 325
>gi|348536584|ref|XP_003455776.1| PREDICTED: AT-rich interactive domain-containing protein 2
[Oreochromis niloticus]
Length = 1690
Score = 39.7 bits (91), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRR 145
T+QWL ++ET S+ RS +++ Y+ C++ + + +N+ F K +R+VF RR
Sbjct: 523 TLQWLNAHFETNPEGSVSRSEMYSEYLATCSKMGRSNILNSTGFLKCLRTVFPNHTMRR 581
>gi|440795109|gb|ELR16246.1| hypothetical protein ACA1_310750 [Acanthamoeba castellanii str.
Neff]
Length = 375
Score = 39.3 bits (90), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 3/77 (3%)
Query: 73 DNQAS---LSHVTKISPATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAAS 129
+NQ+S L + P + WL Y G L + + Y CAE++ + A+
Sbjct: 5 NNQSSSIFLKSKEEAMPHILIWLGRTYVEKPGSMLLKKDVHAAYSAFCAEHRFETTTNAA 64
Query: 130 FGKLIRSVFIGLRTRRL 146
FGK+ + VF RRL
Sbjct: 65 FGKMFKRVFPSAEVRRL 81
>gi|405964187|gb|EKC29702.1| DNA-binding protein RFX5 [Crassostrea gigas]
Length = 1691
Score = 38.9 bits (89), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 14/48 (29%), Positives = 28/48 (58%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVF 138
W+ + E + LP+ +++ Y ++C + L + A FGKL+++VF
Sbjct: 132 WIKSHLEEDIEICLPKQEVYDEYRQYCENHSLVPLCNADFGKLMKTVF 179
>gi|410927538|ref|XP_003977198.1| PREDICTED: AT-rich interactive domain-containing protein 2-like,
partial [Takifugu rubripes]
Length = 1416
Score = 38.9 bits (89), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 35/59 (59%), Gaps = 1/59 (1%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRR 145
T+QWL ++ET S+ R+ +++ Y+ C++ + + +N+ F K +R+VF RR
Sbjct: 524 TLQWLNAHFETNPEGSVSRAEMYSEYLSTCSKMGRSNILNSTGFLKCLRTVFPNHTMRR 582
>gi|47213938|emb|CAF94469.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1231
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAE-NKLDAVNAASFGKLIRSVFIGLRTRR 145
T+QWL ++E S+ RS +++ Y+ C++ + + +N+ F K +R+VF RR
Sbjct: 175 TLQWLNAHFEANPDGSVSRSEMYSEYLTTCSKMGRSNILNSTGFLKCLRTVFPNHTMRR 233
>gi|440799778|gb|ELR20821.1| RFX DNAbinding domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 240
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 88 TVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGKLIRSVFIGLRTRRLG 147
+V WL +YE G + R + + + +CA AA+ GK+I++ F + RRLG
Sbjct: 90 SVAWLHTHYEYHPGGLVQRDEMKDAFAAYCASLGQRPRQAAALGKIIKATFNEVSHRRLG 149
Query: 148 TR 149
R
Sbjct: 150 KR 151
>gi|449267760|gb|EMC78664.1| DNA-binding protein RFX5, partial [Columba livia]
Length = 146
Score = 37.7 bits (86), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 37/70 (52%), Gaps = 9/70 (12%)
Query: 89 VQWLIDNYETAEGVSLPRSSLFNHYI-RHCAENKLD--------AVNAASFGKLIRSVFI 139
W+ ++ E LP+ +++ Y H ++ ++ ++AA+FGK+IR +F
Sbjct: 45 CNWIRNHLEEHTDTCLPKQDVYDAYNGEHTGQDGVNRGFNLCCRPLSAANFGKIIREIFP 104
Query: 140 GLRTRRLGTR 149
++ RRLG R
Sbjct: 105 NIKARRLGGR 114
>gi|410692572|ref|YP_003623193.1| putative Phage/plasmid primase P4, C-terminal [Thiomonas sp. 3As]
gi|410695398|ref|YP_003626020.1| putative Phage/plasmid primase P4, C-terminal [Thiomonas sp. 3As]
gi|294338996|emb|CAZ87341.1| putative Phage/plasmid primase P4, C-terminal [Thiomonas sp. 3As]
gi|294341823|emb|CAZ90252.1| putative Phage/plasmid primase P4, C-terminal [Thiomonas sp. 3As]
Length = 426
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 2/93 (2%)
Query: 63 TSNTGDPLSPDN-QASLSHVTKISPATVQWLID-NYETAEGVSLPRSSLFNHYIRHCAEN 120
T DP+ P QA L + + V W+ D + +P+ +F HY CA N
Sbjct: 318 TRGGFDPVMPAAMQAMLQEAKADTNSVVAWVEDLGVKLQLACDVPKERVFEHYRNWCAVN 377
Query: 121 KLDAVNAASFGKLIRSVFIGLRTRRLGTRRGWR 153
+ V+ F K +R F L R+ T G R
Sbjct: 378 AMHEVSVVQFWKRVREHFRELTEARIRTGPGQR 410
>gi|440800659|gb|ELR21695.1| hypothetical protein ACA1_231820 [Acanthamoeba castellanii str.
Neff]
Length = 70
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 24/47 (51%)
Query: 86 PATVQWLIDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASFGK 132
P WL+ + +G +P+ +F Y CA++ ++ ASFGK
Sbjct: 15 PDVKNWLLSAFREKKGYFVPKKDVFGAYADFCAQHHYESTTPASFGK 61
>gi|196002573|ref|XP_002111154.1| hypothetical protein TRIADDRAFT_54817 [Trichoplax adhaerens]
gi|190587105|gb|EDV27158.1| hypothetical protein TRIADDRAFT_54817 [Trichoplax adhaerens]
Length = 1137
Score = 37.0 bits (84), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)
Query: 91 WLIDNYETAEGVSLPRSSLFNHYIRHCAENKLD---AVNAASFGKLIRSVFIGLRTRRL 146
WL Y+ G +PRS +++ Y+ C N+L VN+ +F +LI VF +R+
Sbjct: 460 WLNATYDCCTGGYVPRSGMYSDYLATC--NRLSITGIVNSTTFSRLIHEVFPSAEIKRV 516
>gi|167757916|ref|ZP_02430043.1| hypothetical protein CLOSCI_00247 [Clostridium scindens ATCC 35704]
gi|167664570|gb|EDS08700.1| resolvase, N-terminal domain protein [Clostridium scindens ATCC
35704]
Length = 308
Score = 35.4 bits (80), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 31/65 (47%), Gaps = 8/65 (12%)
Query: 76 ASLSHVTKISPATVQWL-----IDNYETAEGVSLPRSSLFNHYIRHCAENKLDAVNAASF 130
A +SH+TKI+ AT QWL ID + G S FN + C +KLD + S
Sbjct: 40 AQVSHLTKITAATPQWLLADVYIDISSSKTGSSRKE---FNRMLDDCTSHKLDIIFTKSI 96
Query: 131 GKLIR 135
+ R
Sbjct: 97 SRFGR 101
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.127 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,417,165,262
Number of Sequences: 23463169
Number of extensions: 90660283
Number of successful extensions: 293889
Number of sequences better than 100.0: 820
Number of HSP's better than 100.0 without gapping: 725
Number of HSP's successfully gapped in prelim test: 95
Number of HSP's that attempted gapping in prelim test: 292869
Number of HSP's gapped (non-prelim): 884
length of query: 169
length of database: 8,064,228,071
effective HSP length: 129
effective length of query: 40
effective length of database: 9,332,446,566
effective search space: 373297862640
effective search space used: 373297862640
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 71 (32.0 bits)