BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7157
(167 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q69ZQ2|ISY1_MOUSE Pre-mRNA-splicing factor ISY1 homolog OS=Mus musculus GN=Isy1 PE=1
SV=2
Length = 285
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 113/129 (87%)
Query: 34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
ARNAEKAMT LAR+R A +VK+RRP+LASEC LP AEKWR QII EIS+KVAQIQ
Sbjct: 2 ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61
Query: 94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct: 62 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121
Query: 154 YFGAAKDLP 162
YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MKDIDADYYGYRDDDDGVLIPLEMKEEK 28
MK ID +YYGY D+DDGV++PLE + EK
Sbjct: 152 MKAIDFEYYGYLDEDDGVIVPLEQEYEK 179
>sp|Q9ULR0|ISY1_HUMAN Pre-mRNA-splicing factor ISY1 homolog OS=Homo sapiens GN=ISY1 PE=1
SV=3
Length = 285
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 113/129 (87%)
Query: 34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
ARNAEKAMT LAR+R A +VK+RRP+LASEC LP AEKWR QII EIS+KVAQIQ
Sbjct: 2 ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61
Query: 94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct: 62 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121
Query: 154 YFGAAKDLP 162
YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MKDIDADYYGYRDDDDGVLIPLEMKEEK 28
MK ID +YYGY D+DDGV++PLE + EK
Sbjct: 152 MKAIDFEYYGYLDEDDGVIVPLEQEYEK 179
>sp|Q6AYB3|ISY1_RAT Pre-mRNA-splicing factor ISY1 homolog OS=Rattus norvegicus GN=Isy1
PE=2 SV=1
Length = 284
Score = 220 bits (561), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 104/129 (80%), Positives = 113/129 (87%)
Query: 34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
ARNAEKAMT LAR+R A +VK+RRP+LASEC LP AEKWR QII EIS+KVAQIQ
Sbjct: 2 ARNAEKAMTALARFRQAQLEEGKVKERRPFLASECTELPKAEKWRRQIIGEISKKVAQIQ 61
Query: 94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
NAGLGEFRIRDLNDEINKLLREK HWE +IKEL GPDY +VGP+MLDH+GKEVPGNRGYK
Sbjct: 62 NAGLGEFRIRDLNDEINKLLREKGHWEVRIKELGGPDYGKVGPKMLDHEGKEVPGNRGYK 121
Query: 154 YFGAAKDLP 162
YFGAAKDLP
Sbjct: 122 YFGAAKDLP 130
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/28 (64%), Positives = 23/28 (82%)
Query: 1 MKDIDADYYGYRDDDDGVLIPLEMKEEK 28
MK ID +YYGY D+DDGV++PLE + EK
Sbjct: 152 MKAIDFEYYGYLDEDDGVIVPLEQEYEK 179
>sp|P0CO36|ISY1_CRYNJ Pre-mRNA-splicing factor ISY1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=ISY1 PE=3 SV=1
Length = 348
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 5/134 (3%)
Query: 34 ARNAEKAMTTLARWRAAHE-----HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRK 88
ARN+EKA + L R+R T Q DRRP +AS C SL AE+WR I+R+ISRK
Sbjct: 2 ARNSEKAQSMLYRFREQQAIDMGIGTRQKGDRRPRMASSCTSLREAERWRGDILRDISRK 61
Query: 89 VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPG 148
V++IQ+ L ++++RDLNDEIN+L REK WE QI L G +Y R M D +G+EVPG
Sbjct: 62 VSKIQDVALTDYQVRDLNDEINQLFREKRAWENQIINLGGANYRRAAGVMTDDEGREVPG 121
Query: 149 NRGYKYFGAAKDLP 162
RGYKYFG AK+LP
Sbjct: 122 TRGYKYFGRAKELP 135
>sp|P0CO37|ISY1_CRYNB Pre-mRNA-splicing factor ISY1 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=ISY1 PE=3 SV=1
Length = 348
Score = 144 bits (363), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 72/134 (53%), Positives = 91/134 (67%), Gaps = 5/134 (3%)
Query: 34 ARNAEKAMTTLARWRAAHE-----HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRK 88
ARN+EKA + L R+R T Q DRRP +AS C SL AE+WR I+R+ISRK
Sbjct: 2 ARNSEKAQSMLYRFREQQAIDMGIGTRQKGDRRPRMASSCTSLREAERWRGDILRDISRK 61
Query: 89 VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPG 148
V++IQ+ L ++++RDLNDEIN+L REK WE QI L G +Y R M D +G+EVPG
Sbjct: 62 VSKIQDVALTDYQVRDLNDEINQLFREKRAWENQIINLGGANYRRAAGVMTDDEGREVPG 121
Query: 149 NRGYKYFGAAKDLP 162
RGYKYFG AK+LP
Sbjct: 122 TRGYKYFGRAKELP 135
>sp|Q54N41|ISY1_DICDI Pre-mRNA-splicing factor ISY1 homolog OS=Dictyostelium discoideum
GN=isy1 PE=3 SV=1
Length = 299
Score = 142 bits (357), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 66/129 (51%), Positives = 92/129 (71%)
Query: 34 ARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQ 93
ARN EKA + L R+ + ++RRPYL++EC SL AEKWR QI++EI+R + +IQ
Sbjct: 2 ARNEEKAKSMLNRYLQLKGTESKQEERRPYLSNECDSLVDAEKWRRQILKEITRGITEIQ 61
Query: 94 NAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYK 153
N+ L E++IRDLND INKL+REK HWE +I +L GP++ + P++ D DGKE G Y+
Sbjct: 62 NSALDEYKIRDLNDHINKLVREKGHWERRILQLGGPNHRALAPKLFDADGKEPLGTGTYR 121
Query: 154 YFGAAKDLP 162
Y+G AK+LP
Sbjct: 122 YYGEAKNLP 130
Score = 36.6 bits (83), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/37 (54%), Positives = 25/37 (67%), Gaps = 2/37 (5%)
Query: 2 KDIDADYYGYRDDDDGVLIPLEMKEEKHRYCHARNAE 38
K ID+DYYGYRDD+DG L +E + EK Y +N E
Sbjct: 156 KYIDSDYYGYRDDEDGKLEEIEREYEK--YAIEQNVE 190
>sp|Q7SHY8|ISY1_NEUCR Pre-mRNA-splicing factor isy-1 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=isy-1 PE=3 SV=1
Length = 239
Score = 141 bits (356), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/134 (52%), Positives = 95/134 (70%), Gaps = 5/134 (3%)
Query: 34 ARNAEKAMTTLARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
ARN+EKA + L R+R A D + RRP +E S+PA EKWR Q+++EISRKV
Sbjct: 2 ARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRSITEQDSIPACEKWRGQVLKEISRKV 61
Query: 90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVP-G 148
++IQ+ L +++IRDLNDEINKL+REK WE QI+ L GP+Y R G ++ D G+E+P G
Sbjct: 62 SRIQDPALSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYMRSGGKVYDEAGREIPGG 121
Query: 149 NRGYKYFGAAKDLP 162
RGYKYFG A++LP
Sbjct: 122 GRGYKYFGRARELP 135
>sp|Q4PEZ0|ISY1_USTMA Pre-mRNA-splicing factor ISY1 OS=Ustilago maydis (strain 521 / FGSC
9021) GN=ISY1 PE=3 SV=1
Length = 351
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/132 (57%), Positives = 88/132 (66%), Gaps = 4/132 (3%)
Query: 34 ARNAEKAMTTLARWRAAHEHTDQVKD---RRPYLASECKSLPAAEKWRSQIIREISRKVA 90
ARN EKA + L R+R A + V RRP LAS SL E+WRS +IREISRKV+
Sbjct: 2 ARNQEKAQSMLYRFREAQATSLGVSTKPARRPRLASSVSSLKECERWRSDVIREISRKVS 61
Query: 91 QIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGNR 150
+IQ+ GL ++ +RDLNDEINKLLREK HWE QI L G +Y R P ML D K V G
Sbjct: 62 KIQDFGLNDYEVRDLNDEINKLLREKGHWENQIVALGGANYKRGVPSMLG-DDKGVVGRG 120
Query: 151 GYKYFGAAKDLP 162
GYKYFG AKDLP
Sbjct: 121 GYKYFGRAKDLP 132
>sp|Q51LS1|ISY1_MAGO7 Pre-mRNA-splicing factor ISY1 OS=Magnaporthe oryzae (strain 70-15 /
ATCC MYA-4617 / FGSC 8958) GN=ISY1 PE=3 SV=1
Length = 246
Score = 135 bits (339), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/135 (51%), Positives = 94/135 (69%), Gaps = 6/135 (4%)
Query: 34 ARNAEKAMTTLARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
ARN+EKA + L R+R A D + RRP +E S+PA EKWR Q++++ISRKV
Sbjct: 2 ARNSEKAQSMLFRFREAQAADLGIIDAGRTRRPRAITEQDSIPACEKWRGQVLKDISRKV 61
Query: 90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARV-GPRMLDHDGKEVPG 148
++IQ + L +++IRDLNDEINKL+REK WE QI+ L GP+Y R G ++ D GKE+ G
Sbjct: 62 SRIQESSLSDYQIRDLNDEINKLMREKHMWEVQIRNLGGPNYTRAGGAKVYDEAGKEIGG 121
Query: 149 -NRGYKYFGAAKDLP 162
RGY+YFG AK+LP
Sbjct: 122 AGRGYRYFGRAKELP 136
>sp|Q5B423|ISY1_EMENI Pre-mRNA-splicing factor isy1 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=isy1
PE=3 SV=1
Length = 256
Score = 133 bits (335), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 67/134 (50%), Positives = 92/134 (68%), Gaps = 5/134 (3%)
Query: 34 ARNAEKAMTTLARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
ARN+EKA + L R+RA D + RRP + S+PA EKWR Q+++EISRKV
Sbjct: 2 ARNSEKAQSMLFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPACEKWRGQVLKEISRKV 61
Query: 90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVP-G 148
++IQ L + +IRDLNDEINKL+REK WE QI+ + GP+Y R R+ D +G+E+P G
Sbjct: 62 SRIQEPSLSDHQIRDLNDEINKLMREKWAWEMQIRNMGGPNYMRGSGRVYDDEGREIPGG 121
Query: 149 NRGYKYFGAAKDLP 162
+GY+YFG A++LP
Sbjct: 122 GKGYRYFGRARELP 135
Score = 31.2 bits (69), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%), Gaps = 1/29 (3%)
Query: 2 KDIDADYYGYR-DDDDGVLIPLEMKEEKH 29
K +DA+Y+GY D++DG L+ EM+ EK
Sbjct: 171 KKVDANYFGYGLDEEDGTLLAYEMQREKE 199
>sp|Q4WUJ6|ISY1_ASPFU Pre-mRNA-splicing factor isy1 OS=Neosartorya fumigata (strain ATCC
MYA-4609 / Af293 / CBS 101355 / FGSC A1100) GN=isy1 PE=3
SV=1
Length = 243
Score = 123 bits (309), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 61/124 (49%), Positives = 85/124 (68%), Gaps = 5/124 (4%)
Query: 44 LARWRAAHEH----TDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGE 99
L R+RA D + RRP + S+P+ EKWR Q+++EISRKV++IQ L +
Sbjct: 2 LFRFRAQQAADLGIIDIGRTRRPKAITSVDSIPSCEKWRGQVLKEISRKVSRIQEPSLSD 61
Query: 100 FRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVP-GNRGYKYFGAA 158
++IRDLNDEINKL+REK WE QI+ L GP+Y R R+ D +G+E+P G +GY+YFG A
Sbjct: 62 YQIRDLNDEINKLMREKWAWEMQIRNLGGPNYMRGSGRVYDDEGREIPGGGKGYRYFGRA 121
Query: 159 KDLP 162
++LP
Sbjct: 122 RELP 125
>sp|Q6C9I7|ISY1_YARLI Pre-mRNA-splicing factor ISY1 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=ISY1 PE=3 SV=1
Length = 220
Score = 114 bits (284), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 60/133 (45%), Positives = 86/133 (64%), Gaps = 15/133 (11%)
Query: 34 ARNAEKAMTTLARWRAAHEHT----DQVKDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
+RN+EK + L R++ + D + RP S +SLP AEKWRSQ+++EISRKV
Sbjct: 2 SRNSEKQGSMLHRFQQQQANAAGLLDVGRTVRPTYISGVESLPQAEKWRSQVMKEISRKV 61
Query: 90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHDGKEVPGN 149
+IQ+ L +F++RDLNDEINKL+ E+ W+ QI+ L GP+YA G GK+
Sbjct: 62 TKIQDPALSDFQLRDLNDEINKLMSERHRWDLQIRSLGGPNYASFG-------GKK---- 110
Query: 150 RGYKYFGAAKDLP 162
RGY+Y+G A++LP
Sbjct: 111 RGYQYYGRARELP 123
>sp|Q6BU51|ISY1_DEBHA Pre-mRNA-splicing factor ISY1 OS=Debaryomyces hansenii (strain ATCC
36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=ISY1 PE=3 SV=2
Length = 298
Score = 105 bits (263), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 60/141 (42%), Positives = 77/141 (54%), Gaps = 15/141 (10%)
Query: 34 ARNAEKAMTTLARWRAAHEHTDQVKDR----RPYLASECKSLPAAEKWRSQIIREISRKV 89
+RN EKA ++L R++A V + RP SLP AEKWRS II EIS K+
Sbjct: 2 SRNTEKAQSSLNRFQALKNKEAGVLESNPNFRPKYVQSVDSLPQAEKWRSTIIGEISVKL 61
Query: 90 AQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGP--------RMLDH 141
+IQ+ L E++IRD+ND +NKL EK WE IK L G DY LD
Sbjct: 62 TKIQDPALNEYQIRDINDSLNKLFNEKRSWEYHIKNLGGADYMHFNKDFNNAGKLSQLDS 121
Query: 142 DGKEVPGNRGYKYFGAAKDLP 162
G + +GY+YFG AK+LP
Sbjct: 122 SGSHI---KGYRYFGRAKELP 139
>sp|O74370|ISY1_SCHPO Pre-mRNA-splicing factor cwf12 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=cwf12 PE=1 SV=1
Length = 217
Score = 96.3 bits (238), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 73/104 (70%)
Query: 59 DRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSH 118
++RP KS+P EK R+ ++++ISRK+++IQ+A L E++IRDLND IN+L+REK
Sbjct: 14 EKRPKDIKSIKSVPICEKHRASVVKDISRKISRIQSATLPEYQIRDLNDAINRLMREKHE 73
Query: 119 WEAQIKELDGPDYARVGPRMLDHDGKEVPGNRGYKYFGAAKDLP 162
WE QI++L G +Y ++ + +G+++ Y+Y+G A++LP
Sbjct: 74 WEVQIRDLGGINYLYNKAKLFEDEGEQISDIDDYRYYGRARELP 117
>sp|Q753F1|ISY1_ASHGO Pre-mRNA-splicing factor ISY1 OS=Ashbya gossypii (strain ATCC 10895
/ CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=ISY1 PE=3
SV=1
Length = 240
Score = 88.2 bits (217), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 79/135 (58%), Gaps = 9/135 (6%)
Query: 34 ARNAEKAMTTLARWRA-AHEHTDQVKD----RRPYLASECKSLPAAEKWRSQIIREISRK 88
+RN +KA + LAR++ E+T KD +RP +L A++WR++++++I K
Sbjct: 2 SRNVDKANSVLARYQELVAENTSGYKDYSRFKRPTAVHRISNLEEAQRWRAEVVKDIGNK 61
Query: 89 VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQI-KELDGPDYARVGPRMLDHDGKEVP 147
V QI + L E +I D+N+E+N+L +EK WE+ I + L GPDY R+ + G +
Sbjct: 62 VTQIHDPSLNEMQIEDINNELNRLFQEKMRWESHIRRNLRGPDYRRMKQGLNTTGGTVIN 121
Query: 148 GNRGYKYFGAAKDLP 162
G R YFG A +LP
Sbjct: 122 GTR---YFGRALELP 133
>sp|Q59R35|ISY1_CANAL Pre-mRNA-splicing factor ISY1 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=ISY1 PE=3 SV=1
Length = 266
Score = 75.9 bits (185), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 75/144 (52%), Gaps = 21/144 (14%)
Query: 34 ARNAEKAMTTLARWRAA--------HEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREI 85
+RN EKA ++L R+ + H H +RP L AE WR II EI
Sbjct: 2 SRNKEKAQSSLNRFYQSQSSAPINYHYH------QRPKNIHSITQLSQAEGWRRSIIGEI 55
Query: 86 SRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKE-LDGPDYARVGPRM---LDH 141
S+++ +I + + + ++R+LND++N+L EK WE I++ L G DY R L +
Sbjct: 56 SKQLTEINDFEISDIKVRELNDQLNELFNEKRRWEYHIRDKLHGNDYIRHNGNTKNDLIN 115
Query: 142 DGKEVPGN---RGYKYFGAAKDLP 162
G V + + Y+YFG AKDLP
Sbjct: 116 TGIRVNNSDKGKYYRYFGRAKDLP 139
>sp|Q6CJQ3|ISY1_KLULA Pre-mRNA-splicing factor ISY1 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=ISY1 PE=3 SV=1
Length = 237
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 76/135 (56%), Gaps = 10/135 (7%)
Query: 34 ARNAEKAMTTLARWRAAHE-----HTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRK 88
+RN KA + L R++ + D + +RP ++ L A +WR+++++EI ++
Sbjct: 2 SRNVNKANSVLVRYQELQAAETGGYQDFSRLKRPTRINKVTKLDEALRWRNELVKEIGQR 61
Query: 89 VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIK-ELDGPDYARVGPRMLDHDGKEVP 147
V QI + L E +I ++NDE+NKL +EK W+ I+ +L GPD + + L+ G +
Sbjct: 62 VTQIHDPSLNESQITEINDELNKLFQEKGRWDFHIRNKLKGPDLKK--RKQLNTTGGTLI 119
Query: 148 GNRGYKYFGAAKDLP 162
G +YFG A +LP
Sbjct: 120 D--GKRYFGRALELP 132
>sp|P21374|ISY1_YEAST Pre-mRNA-splicing factor ISY1 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=ISY1 PE=1 SV=2
Length = 235
Score = 63.9 bits (154), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 73/141 (51%), Gaps = 18/141 (12%)
Query: 34 ARNAEKAMTTLARWR-----AAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRK 88
+RN +KA + L R++ +A + D + +RP S+ KS+ A +W+ Q+ +EI +K
Sbjct: 2 SRNVDKANSVLVRFQEQQAESAGGYKDYSRYQRPRNVSKVKSIKEANEWKRQVSKEIKQK 61
Query: 89 VAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPR-------MLDH 141
+I + L E +I +LNDE+N L +E W+ I D + R +L +
Sbjct: 62 STRIYDPSLNEMQIAELNDELNNLFKEWKRWQWHI---DHTLMEKKTKRKRLEDSHVLMN 118
Query: 142 DGKEVPGNRGYKYFGAAKDLP 162
GK + G R YFG A +LP
Sbjct: 119 SGKLINGKR---YFGRALELP 136
>sp|Q6FR30|ISY1_CANGA Pre-mRNA-splicing factor ISY1 OS=Candida glabrata (strain ATCC 2001
/ CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=ISY1
PE=3 SV=1
Length = 203
Score = 40.0 bits (92), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 24/95 (25%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 34 ARNAEKAMTTLARWR--AAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQ 91
+RN +K+ T LA ++ A D + +RP + S + A +W Q +RE+ +
Sbjct: 2 SRNVDKSQTVLALYQEHKAESRRDYNRYKRPRVES-VRDPAEAREWYKQTLREVGECTNR 60
Query: 92 IQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKEL 126
+ + L E ++R+ N +N+L++E W ++
Sbjct: 61 LYDPLLSEEQVRECNARVNQLIQESQRWSRHLRRF 95
>sp|Q8BW94|DYH3_MOUSE Dynein heavy chain 3, axonemal OS=Mus musculus GN=Dnah3 PE=1 SV=2
Length = 4083
Score = 33.1 bits (74), Expect = 0.90, Method: Composition-based stats.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 6/90 (6%)
Query: 35 RNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQN 94
+N A L +W A E D+V +A + + L AE ++++++K A+++
Sbjct: 2842 KNVSSACEGLCKWVRAMEVYDRVAK---VVAPKRERLREAEGKLEIQMQKLNQKRAELK- 2897
Query: 95 AGLGEFRIRDLNDEINKLLREKSHWEAQIK 124
L E R++DLNDE + R+K+ E I+
Sbjct: 2898 --LVEDRLQDLNDEFELMNRKKNSLEKNIE 2925
>sp|P24464|CP4AC_RAT Cytochrome P450 4A12 OS=Rattus norvegicus GN=Cyp4a12 PE=2 SV=2
Length = 508
Score = 32.0 bits (71), Expect = 2.1, Method: Composition-based stats.
Identities = 26/86 (30%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 31 YCHARNAEKAMTTLARWRAAHEHTDQV-KDRRPYLASECKSLPAAEKWRSQIIREISRKV 89
Y + N KA + W+ AHEHTDQV K R+ L E + +K R + +
Sbjct: 241 YSLSSNGRKARSA---WQLAHEHTDQVIKSRKAQLQDEEELQKVKQKRRLDFLDIL--LF 295
Query: 90 AQIQNAGLGEFRIRDLNDEINKLLRE 115
A+I+N +DL E++ + E
Sbjct: 296 ARIENG--SSLSDKDLRAEVDTFMFE 319
>sp|P94393|YCGP_BACSU Uncharacterized protein YcgP OS=Bacillus subtilis (strain 168)
GN=ycgP PE=3 SV=2
Length = 411
Score = 31.6 bits (70), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 17 GVLIPLEMKEEKHRYCHARNAEKAMTTLARWRAAHEHTDQVKDRRPYLASECKSLPAAEK 76
G+ LE E+K+ + N + A L + + T+ +K YL + CK+ PAAE+
Sbjct: 313 GIYRYLESIEQKNEFLEYENKDLA---LLKAKDEESSTELLKTLEIYLLNNCKTKPAAEQ 369
Query: 77 W--RSQIIREISRKVAQIQNAGLGEFRIR 103
+ +++ ++ + L +FR R
Sbjct: 370 LFIHQNTLNYRIKQITEMTSIDLSDFRTR 398
>sp|P26902|DPPA_BACSU D-aminopeptidase OS=Bacillus subtilis (strain 168) GN=dppA PE=1
SV=3
Length = 274
Score = 31.6 bits (70), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 31/60 (51%)
Query: 75 EKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKELDGPDYARV 134
E+ R + E + +A+ N+G E + D + ++N L+ EK H EA + D ++ V
Sbjct: 29 ERGRLIMTEEANYCIAEAFNSGCTEVLVNDSHSKMNNLMVEKLHPEADLISGDVKPFSMV 88
>sp|Q59037|SMC_METJA Chromosome partition protein Smc OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=smc PE=3 SV=2
Length = 1169
Score = 30.4 bits (67), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 52/103 (50%), Gaps = 24/103 (23%)
Query: 27 EKHRYCHARNAEKAMTTLARWRAAHE----HTDQVKDRRPYLASECKSLPAAEKWRSQII 82
EK+ + + EK ++ L R +E + ++ +++ L E ++L E+ R +I+
Sbjct: 856 EKNISFYKESIEKNLSILEEKRKRYEELAKNLKELTEKKEQLEKEIETL---ERERREIL 912
Query: 83 REISRKVAQIQNAGLGEFRIRDLNDEINKLLREKSHWEAQIKE 125
R ++RD+ + IN+L+ EK+ +E++++E
Sbjct: 913 R-----------------KVRDIENRINELMVEKAKYESKLEE 938
>sp|P0ADT5|YGIC_ECOLI Uncharacterized protein YgiC OS=Escherichia coli (strain K12)
GN=ygiC PE=4 SV=1
Length = 386
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 84 EISRKVAQIQNAGLGE-FRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHD 142
EI+ + I + GLGE + DL D++ L + WE ++E+ G R L+
Sbjct: 200 EIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPA 259
Query: 143 GKEVPGNRG 151
K + N+
Sbjct: 260 WKSIISNKA 268
>sp|P0ADT6|YGIC_ECOL6 Uncharacterized protein YgiC OS=Escherichia coli O6:H1 (strain
CFT073 / ATCC 700928 / UPEC) GN=ygiC PE=4 SV=1
Length = 386
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 84 EISRKVAQIQNAGLGE-FRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHD 142
EI+ + I + GLGE + DL D++ L + WE ++E+ G R L+
Sbjct: 200 EIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPA 259
Query: 143 GKEVPGNRG 151
K + N+
Sbjct: 260 WKSIISNKA 268
>sp|P0ADT7|YGIC_ECO57 Uncharacterized protein YgiC OS=Escherichia coli O157:H7 GN=ygiC
PE=4 SV=1
Length = 386
Score = 30.0 bits (66), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 1/69 (1%)
Query: 84 EISRKVAQIQNAGLGE-FRIRDLNDEINKLLREKSHWEAQIKELDGPDYARVGPRMLDHD 142
EI+ + I + GLGE + DL D++ L + WE ++E+ G R L+
Sbjct: 200 EIATEFLYIDDIGLGEKGQFTDLQDQVISNLFKLYPWEFMLREMFSTKLEDAGVRWLEPA 259
Query: 143 GKEVPGNRG 151
K + N+
Sbjct: 260 WKSIISNKA 268
>sp|Q2TLY2|MACO1_DANRE Macoilin-1 OS=Danio rerio GN=tmem57a PE=2 SV=1
Length = 664
Score = 29.6 bits (65), Expect = 9.6, Method: Composition-based stats.
Identities = 20/69 (28%), Positives = 30/69 (43%)
Query: 52 EHTDQVKDRRPYLASECKSLPAAEKWRSQIIREISRKVAQIQNAGLGEFRIRDLNDEINK 111
E TD +K R L SECK L K + + IRE+ K ++ E L ++
Sbjct: 501 ECTDSLKSRIRELESECKKLTHDMKLKEEQIRELELKAQELHKYKENEKDTEVLMSALSA 560
Query: 112 LLREKSHWE 120
+ + H E
Sbjct: 561 MQDKTQHLE 569
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,894,046
Number of Sequences: 539616
Number of extensions: 2796410
Number of successful extensions: 7686
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 7634
Number of HSP's gapped (non-prelim): 53
length of query: 167
length of database: 191,569,459
effective HSP length: 109
effective length of query: 58
effective length of database: 132,751,315
effective search space: 7699576270
effective search space used: 7699576270
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)