BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7162
(309 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 13 VKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEH 72
V R+++ RK D+ E VA+K+E + L +E + K +QG
Sbjct: 5 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 64
Query: 73 VCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVG 132
+ CG +N +VM+L G +L +L R FSL T L L Q++ IE IHS
Sbjct: 65 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 123
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
F+HRD+KP NF +G L VY++DFGLA++Y + ++ R
Sbjct: 124 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHI---------PYRENKNL 173
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 225
GT RYASIN H E R DDL SL Y+L+ F
Sbjct: 174 TGTARYASINTHLGIEQSRRDDLESLGYVLMYF 206
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 275
R GT RYASIN H E R DDL SL Y+L+ F
Sbjct: 168 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYF 206
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 114 bits (285), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 75/213 (35%), Positives = 105/213 (49%), Gaps = 11/213 (5%)
Query: 13 VKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEH 72
V R+++ RK D+ E VA+K+E + L +E + K +QG
Sbjct: 7 VGNRYRLGRKIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVG 66
Query: 73 VCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVG 132
+ CG +N +VM+L G +L +L R FSL T L L Q++ IE IHS
Sbjct: 67 IPTIRWCGAEGDYNVMVMELLGPSLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKN 125
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
F+HRD+KP NF +G L VY++DFGLA++Y + ++ R
Sbjct: 126 FIHRDVKPDNFLMG-LGKKGNLVYIIDFGLAKKYRDARTHQHI---------PYRENKNL 175
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 225
GT RYASIN H E R DDL SL Y+L+ F
Sbjct: 176 TGTARYASINTHLGIEQSRRDDLESLGYVLMYF 208
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 275
R GT RYASIN H E R DDL SL Y+L+ F
Sbjct: 170 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYF 208
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 110 bits (276), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 70/190 (36%), Positives = 98/190 (51%), Gaps = 11/190 (5%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++ + E VA+K+E + L +E K +QG + CG +N +VM+L G
Sbjct: 30 NIASGEEVAIKLECVKTKHPQLHIESKFYKMMQGGVGIPSIKWCGAEGDYNVMVMELLGP 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L +L R FSL T L L Q++ IE IHS F+HRD+KP NF +G L V
Sbjct: 90 SLEDLFNFCSR-KFSLKTVLLLADQMISRIEYIHSKNFIHRDVKPDNFLMG-LGKKGNLV 147
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
Y++DFGLA++Y + ++ R GT RYASIN H E R DDL
Sbjct: 148 YIIDFGLAKKYRDARTHQHI---------PYRENKNLTGTARYASINTHLGIEQSRRDDL 198
Query: 216 WSLFYMLVEF 225
SL Y+L+ F
Sbjct: 199 ESLGYVLMYF 208
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 22/39 (56%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 275
R GT RYASIN H E R DDL SL Y+L+ F
Sbjct: 170 RENKNLTGTARYASINTHLGIEQSRRDDLESLGYVLMYF 208
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 106 bits (265), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 70/196 (35%), Positives = 101/196 (51%), Gaps = 11/196 (5%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++ T E VA+K+E+ + L E + + LQG + G +N +VM L G
Sbjct: 28 NIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWFGVEGDYNVLVMDLLGP 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L +L R SL T L L Q++ +E +HS FLHRDIKP NF +G L + +V
Sbjct: 88 SLEDLFNFCSR-KLSLKTVLMLADQMINRVEFVHSKSFLHRDIKPDNFLMG-LGRRANQV 145
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
Y++DFGLA++Y +S ++ R GT RYAS+N H E R DDL
Sbjct: 146 YIIDFGLAKKYRDTSTHQHIPY---------RENKNLTGTARYASVNTHLGIEQSRRDDL 196
Query: 216 WSLFYMLVEFVNIQHP 231
SL Y+L+ F+ P
Sbjct: 197 ESLGYVLMYFLRGSLP 212
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 67/195 (34%), Positives = 103/195 (52%), Gaps = 17/195 (8%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKL---QGKEHVCRFIGCGRNDRFNYVVMQL 92
+L T E VA+K+E + L +E K+L G V F CG+ +N +V++L
Sbjct: 30 NLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGK---YNAMVLEL 86
Query: 93 QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTS 152
G +L +L R FSL T L + IQ++ +E +HS ++RD+KP NF IGR + +
Sbjct: 87 LGPSLEDLFDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKT 145
Query: 153 RRV-YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGR 211
++V +++DFGLA++Y ++ R GT RY SIN H KE R
Sbjct: 146 QQVIHIIDFGLAKEYIDPETKKHIPY---------REHKSLTGTARYMSINTHLGKEQSR 196
Query: 212 HDDLWSLFYMLVEFV 226
DDL +L +M + F+
Sbjct: 197 RDDLEALGHMFMYFL 211
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 276
R GT RY SIN H KE R DDL +L +M + F+
Sbjct: 172 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 211
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 63/193 (32%), Positives = 101/193 (52%), Gaps = 13/193 (6%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
+L T E VA+K+E + L +E K+L E V + G ++N +V++L G
Sbjct: 25 NLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLSATEGVPQVYYFGPXGKYNAMVLELLGP 84
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR- 154
+L +L R F+L T L + IQ++ +E +H+ ++RD+KP NF +GR T R+
Sbjct: 85 SLEDLFDLCDR-TFTLKTVLMIAIQLITRMEYVHTKSLIYRDVKPENFLVGR-PGTKRQH 142
Query: 155 -VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
++++DFGLA++Y ++ R GT RY SIN H KE R D
Sbjct: 143 AIHIIDFGLAKEYIDPETKKHIPY---------REHKSLTGTARYMSINTHLGKEQSRRD 193
Query: 214 DLWSLFYMLVEFV 226
DL +L +M + F+
Sbjct: 194 DLEALGHMFMYFL 206
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKL---QGKEHVCRFIGCGRNDRFNYVVMQL 92
+L T E VA+K+E + L +E K+L G V F CG+ +N +V++L
Sbjct: 51 NLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGK---YNAMVLEL 107
Query: 93 QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTS 152
G +L +L R FSL T L + IQ++ +E +HS ++RD+KP NF IGR + +
Sbjct: 108 LGPSLEDLFDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKT 166
Query: 153 RRV-YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGR 211
++V +++DF LA++Y ++ R GT RY SIN H KE R
Sbjct: 167 QQVIHIIDFALAKEYIDPETKKHIPY---------REHKSLTGTARYMSINTHLGKEQSR 217
Query: 212 HDDLWSLFYMLVEFV 226
DDL +L +M + F+
Sbjct: 218 RDDLEALGHMFMYFL 232
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 276
R GT RY SIN H KE R DDL +L +M + F+
Sbjct: 193 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 232
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 101 bits (251), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 66/195 (33%), Positives = 102/195 (52%), Gaps = 17/195 (8%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKL---QGKEHVCRFIGCGRNDRFNYVVMQL 92
+L T E VA+K+E + L +E K+L G V F CG+ +N +V++L
Sbjct: 30 NLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFGPCGK---YNAMVLEL 86
Query: 93 QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTS 152
G +L +L R FSL T L + IQ++ +E +HS ++RD+KP NF IGR + +
Sbjct: 87 LGPSLEDLFDLCDR-TFSLKTVLMIAIQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKT 145
Query: 153 RRV-YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGR 211
++V +++DF LA++Y ++ R GT RY SIN H KE R
Sbjct: 146 QQVIHIIDFALAKEYIDPETKKHIPY---------REHKSLTGTARYMSINTHLGKEQSR 196
Query: 212 HDDLWSLFYMLVEFV 226
DDL +L +M + F+
Sbjct: 197 RDDLEALGHMFMYFL 211
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 276
R GT RY SIN H KE R DDL +L +M + F+
Sbjct: 172 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 211
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 99.0 bits (245), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 67/201 (33%), Positives = 101/201 (50%), Gaps = 18/201 (8%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKL----QGKEHVCRFIGCGRNDRFNYVVMQ 91
+L T E VA+K+E + L +E K+L +G V F G ++N +V++
Sbjct: 21 NLYTNEYVAIKLEPIKSRAPQLHLEYRFYKQLGSAGEGLPQVYYF---GPXGKYNAMVLE 77
Query: 92 LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHT 151
L G +L +L R F+L T L + IQ+L +E +HS ++RD+KP NF IGR +
Sbjct: 78 LLGPSLEDLFDLCDR-TFTLKTVLMIAIQLLSRMEYVHSKNLIYRDVKPENFLIGRQGNK 136
Query: 152 SRRV-YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
V +++DFGLA++Y ++ R GT RY SIN H KE
Sbjct: 137 KEHVIHIIDFGLAKEYIDPETKKHIPY---------REHKSLTGTARYMSINTHLGKEQS 187
Query: 211 RHDDLWSLFYMLVEFVNIQHP 231
R DDL +L +M + F+ P
Sbjct: 188 RRDDLEALGHMFMYFLRGSLP 208
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 22/40 (55%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 276
R GT RY SIN H KE R DDL +L +M + F+
Sbjct: 164 REHKSLTGTARYMSINTHLGKEQSRRDDLEALGHMFMYFL 203
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 27/251 (10%)
Query: 9 QGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKVESARQPKQVLKMEVAVLKKLQ 68
Q ++V +KV R+ +L+ + VA+K E R L+ E K L
Sbjct: 3 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLA 62
Query: 69 GKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESI 128
G + G+ N +V+ L G +L +L R FS+ T Q+L ++SI
Sbjct: 63 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSI 121
Query: 129 HSVGFLHRDIKPSNFSIGRLQ-HTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPR 187
H ++RDIKP NF IGR + +Y++DFG+ + Y ++ R
Sbjct: 122 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY---------R 172
Query: 188 AAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVR 247
GT RY SIN H +E R DDL +L ++ + F+ RG++
Sbjct: 173 EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL----------------RGSLP 216
Query: 248 YASINAHKNKE 258
+ + A NK+
Sbjct: 217 WQGLKAATNKQ 227
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 276
R GT RY SIN H +E R DDL +L ++ + F+
Sbjct: 172 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 211
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 85.1 bits (209), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 68/251 (27%), Positives = 108/251 (43%), Gaps = 27/251 (10%)
Query: 9 QGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKVESARQPKQVLKMEVAVLKKLQ 68
Q ++V +KV R+ +L+ + VA+K E R L+ E K L
Sbjct: 4 QNNVVGVHYKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLA 63
Query: 69 GKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESI 128
G + G+ N +V+ L G +L +L R FS+ T Q+L ++SI
Sbjct: 64 GCTGIPNVYYFGQEGLHNVLVIDLLGPSLEDLLDLCGR-KFSVKTVAMAAKQMLARVQSI 122
Query: 129 HSVGFLHRDIKPSNFSIGRLQ-HTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPR 187
H ++RDIKP NF IGR + +Y++DFG+ + Y ++ R
Sbjct: 123 HEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY---------R 173
Query: 188 AAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVR 247
GT RY SIN H +E R DDL +L ++ + F+ RG++
Sbjct: 174 EKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL----------------RGSLP 217
Query: 248 YASINAHKNKE 258
+ + A NK+
Sbjct: 218 WQGLKAATNKQ 228
Score = 34.7 bits (78), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 16/40 (40%), Positives = 22/40 (55%)
Query: 237 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 276
R GT RY SIN H +E R DDL +L ++ + F+
Sbjct: 173 REKKNLSGTARYMSINTHLGREQSRRDDLEALGHVFMYFL 212
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 80/152 (52%), Gaps = 15/152 (9%)
Query: 80 GRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIK 139
GR+ RF +VM+ G +L ++ + G F ST L+LGI++L +E IH ++H DIK
Sbjct: 123 GRSYRF--MVMERLGIDLQKI--SGQNGTFKKSTVLQLGIRMLDVLEYIHENEYVHGDIK 178
Query: 140 PSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYA 199
+N +G +VY+ D+GL+ +Y + + + PR G GT+ +
Sbjct: 179 AANLLLGY--KNPDQVYLADYGLSYRYCPNGNHKQYQEN-------PR--KGHNGTIEFT 227
Query: 200 SINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
S++AHK + R D+ L Y ++ ++ + P
Sbjct: 228 SLDAHKGVALSRRSDVEILGYCMLRWLCGKLP 259
>pdb|2KTY|A Chain A, Solution Structure Of Human Vaccinia Related Kinase-1
pdb|2KUL|A Chain A, Solution Structure Of Human Vaccinia Related Kinase
1(Vrk1)
Length = 368
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 48 ESARQPKQVLK-MEVAVLKKLQGKEHVCRFIGCGRNDR----FNYVVMQLQGKNLAELRR 102
+ A +P+Q+ K + LK L V ++ G G +D+ + +++M G +L ++
Sbjct: 88 QRAAKPEQIQKWIRTRKLKYLG----VPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYE 143
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
A + FS T L+L ++IL +E IH ++H DIK SN + +VY++D+GL
Sbjct: 144 ANAK-RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN--YKNPDQVYLVDYGL 200
Query: 163 ARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYML 222
A +Y + + P+ GT+ + SI+AH R DL L Y +
Sbjct: 201 AYRYCPEGVHKEYKED-------PKRC--HDGTIEFTSIDAHNGVAPSRRGDLEILGYCM 251
Query: 223 VEFVNIQHP 231
++++ P
Sbjct: 252 IQWLTGHLP 260
Score = 28.1 bits (61), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 244 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNFFRIGTGH-AFSTSLAMPR 295
GT+ + SI+AH R DL L Y +++++ TGH + +L P+
Sbjct: 223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL------TGHLPWEDNLKDPK 269
>pdb|2LAV|A Chain A, Nmr Solution Structure Of Human Vaccinia-Related Kinase 1
Length = 361
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 91/189 (48%), Gaps = 21/189 (11%)
Query: 48 ESARQPKQVLK-MEVAVLKKLQGKEHVCRFIGCGRNDR----FNYVVMQLQGKNLAELRR 102
+ A +P+Q+ K + LK L V ++ G G +D+ + +++M G +L ++
Sbjct: 88 QRAAKPEQIQKWIRTRKLKYLG----VPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYE 143
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
A + FS T L+L ++IL +E IH ++H DIK SN + +VY++D+GL
Sbjct: 144 ANAK-RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN--YKNPDQVYLVDYGL 200
Query: 163 ARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYML 222
A +Y + + P+ GT+ + SI+AH R DL L Y +
Sbjct: 201 AYRYCPEGVHKEYKED-------PKRC--HDGTIEFTSIDAHNGVAPSRRGDLEILGYCM 251
Query: 223 VEFVNIQHP 231
++++ P
Sbjct: 252 IQWLTGHLP 260
Score = 28.1 bits (61), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 244 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNFFRIGTGH-AFSTSLAMPR 295
GT+ + SI+AH R DL L Y +++++ TGH + +L P+
Sbjct: 223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL------TGHLPWEDNLKDPK 269
>pdb|3OP5|A Chain A, Human Vaccinia-Related Kinase 1
pdb|3OP5|B Chain B, Human Vaccinia-Related Kinase 1
pdb|3OP5|C Chain C, Human Vaccinia-Related Kinase 1
pdb|3OP5|D Chain D, Human Vaccinia-Related Kinase 1
Length = 364
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/187 (27%), Positives = 89/187 (47%), Gaps = 21/187 (11%)
Query: 50 ARQPKQVLK-MEVAVLKKLQGKEHVCRFIGCGRNDR----FNYVVMQLQGKNLAELRRAQ 104
A +P+Q+ K + LK L V ++ G G +D+ + +++M G +L ++ A
Sbjct: 90 AAKPEQIQKWIRTRKLKYLG----VPKYWGSGLHDKNGKSYRFMIMDRFGSDLQKIYEAN 145
Query: 105 PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
+ FS T L+L ++IL +E IH ++H DIK SN + +VY++D+GLA
Sbjct: 146 AK-RFSRKTVLQLSLRILDILEYIHEHEYVHGDIKASNLLLN--YKNPDQVYLVDYGLAY 202
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVE 224
+Y + + A GT+ + SI+AH R DL L Y +++
Sbjct: 203 RYCPEGVHKAY---------AADPKRCHDGTIEFTSIDAHNGVAPSRRGDLEILGYCMIQ 253
Query: 225 FVNIQHP 231
++ P
Sbjct: 254 WLTGHLP 260
Score = 28.1 bits (61), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 244 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNFFRIGTGH-AFSTSLAMPR 295
GT+ + SI+AH R DL L Y +++++ TGH + +L P+
Sbjct: 223 GTIEFTSIDAHNGVAPSRRGDLEILGYCMIQWL------TGHLPWEDNLKDPK 269
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 58/227 (25%), Positives = 99/227 (43%), Gaps = 26/227 (11%)
Query: 10 GHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKVE--SARQPKQVLK-MEVAVLKK 66
G I+ ER+K++ K D + VA+K R+ ++ LK E V
Sbjct: 6 GKIINERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNS 65
Query: 67 LQ-GKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKA 124
Q +++ I D Y+VM+ ++G L+E + G S+ T + QIL
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEY--IESHGPLSVDTAINFTNQILDG 123
Query: 125 IESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVR 184
I+ H + +HRDIKP N I +++ + + DFG+A+ + +S T + V
Sbjct: 124 IKHAHDMRIVHRDIKPQNILID----SNKTLKIFDFGIAKALSETS------LTQTNHV- 172
Query: 185 APRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
GTV+Y S K + D++S+ +L E + + P
Sbjct: 173 --------LGTVQYFSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 25/141 (17%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L G +L + ++Q A S L Q+L+ ++ IHS G +HRD+KPSN ++
Sbjct: 109 YLVTTLMGADLNNIVKSQ---ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 165
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ +LDFGLARQ E+ + T RAP + H N
Sbjct: 166 E----DSELRILDFGLARQ--ADEEMTGYVATRW--YRAPEIMLNW----------MHYN 207
Query: 207 KEMGRHDDLWSLFYMLVEFVN 227
+ + D+WS+ ++ E +
Sbjct: 208 QTV----DIWSVGCIMAELLQ 224
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L G +L + + Q A S L Q+L+ ++ IHS G +HRD+KPSN ++
Sbjct: 109 YLVTTLMGADLNNIVKCQ---ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 165
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ +LDFGLARQ E+ + T RAP + H N
Sbjct: 166 E----DSELRILDFGLARQ--ADEEMTGYVATRW--YRAPEIMLNW----------MHYN 207
Query: 207 KEMGRHDDLWSLFYMLVEFVN 227
+ + D+WS+ ++ E +
Sbjct: 208 QTV----DIWSVGCIMAELLQ 224
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRA 103
ALK ++ Q + K E+ +L+ L EH+ ++ GC + + + ++ L LR
Sbjct: 67 ALKADAGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDY 125
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
PR + L+ L QI + + +H+ ++HRD+ N L R V + DFGLA
Sbjct: 126 LPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRDLAARNV----LLDNDRLVKIGDFGLA 181
Query: 164 RQYTTSSELRNFNTTSSGEV--RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
+ E V AP ++ YAS D+WS
Sbjct: 182 KAVPEGHEXYRVREDGDSPVFWYAPECLKEYK--FYYAS-------------DVWSFGVT 226
Query: 222 LVEFVN 227
L E +
Sbjct: 227 LYELLT 232
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 25/141 (17%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L G +L + + Q A S L Q+L+ ++ IHS G +HRD+KPSN ++
Sbjct: 101 YLVTTLMGADLNNIVKCQ---ALSDEHVQFLVYQLLRGLKYIHSAGIIHRDLKPSNVAVN 157
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ +LDFGLARQ E+ + T RAP + H N
Sbjct: 158 E----DCELRILDFGLARQ--ADEEMTGYVATRW--YRAPEIMLNW----------MHYN 199
Query: 207 KEMGRHDDLWSLFYMLVEFVN 227
+ + D+WS+ ++ E +
Sbjct: 200 QTV----DIWSVGCIMAELLQ 216
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/133 (28%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 168
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA A F GT +Y S K +
Sbjct: 169 -IQITDFGTAK-------------VLSPESKQARANA-FVGTAQYVSPELLTEKSACKSS 213
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 214 DLWALGCIIYQLV 226
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 114 AKNGCLLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N+ F GT +Y S K +
Sbjct: 171 -IQITDFGTAKVLSPESKQARANS--------------FVGTAQYVSPELLTEKSASKSS 215
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 216 DLWALGCIIYQLV 228
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/186 (26%), Positives = 77/186 (41%), Gaps = 37/186 (19%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGR--NDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRL 117
E+ +L +L G E++ + R NDR Y+V +L + RA +
Sbjct: 58 EIMILTELSGHENIVNLLNVLRADNDRDVYLVFDYMETDLHAVIRANILEPVHKQYVV-- 115
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQY----------- 166
Q++K I+ +HS G LHRD+KPSN + H V + DFGL+R +
Sbjct: 116 -YQLIKVIKYLHSGGLLHRDMKPSNILLNAECH----VKVADFGLSRSFVNIRRVTNNIP 170
Query: 167 -TTSSELRNFNT-----TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
+ + NF+ T R RA G+ +Y + D+WSL
Sbjct: 171 LSINENTENFDDDQPILTDYVATRWYRAPEILLGSTKYT-----------KGIDMWSLGC 219
Query: 221 MLVEFV 226
+L E +
Sbjct: 220 ILGEIL 225
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 81 RNDRFNYVVMQ-LQGKNLAELRRAQ--PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRD 137
++DR+ Y+VM+ + G +L L P T +++ A+++IHS+GF+HRD
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-----EVVLALDAIHSMGFIHRD 198
Query: 138 IKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVR 197
+KP N + + H + DFG + +R + + +P G
Sbjct: 199 VKPDNMLLDKSGHLK----LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 198 YASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYASINAHKN 256
Y GR D WS+ L E + + P A GT Y+ I HKN
Sbjct: 255 Y-----------GRECDWWSVGVFLYEML-----VGDTPFYADSLVGT--YSKIMNHKN 295
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/193 (26%), Positives = 82/193 (42%), Gaps = 36/193 (18%)
Query: 50 ARQPKQVLKMEVAVLKKLQGKEHVCRFIGC--GRNDRFNYVVMQL--QGK-----NLAEL 100
R P + + E+A+LKKL +V + + N+ Y+V +L QG L L
Sbjct: 76 PRGPIEQVYQEIAILKKLD-HPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPL 134
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
Q R F ++K IE +H +HRDIKPSN +G H + + DF
Sbjct: 135 SEDQARFYFQ---------DLIKGIEYLHYQKIIHRDIKPSNLLVGEDGH----IKIADF 181
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
G++ ++ S L + NT + AP + + R G+ D+W++
Sbjct: 182 GVSNEFKGSDALLS-NTVGTPAFMAPESLSETRKIFS------------GKALDVWAMGV 228
Query: 221 MLVEFVNIQHPLV 233
L FV Q P +
Sbjct: 229 TLYCFVFGQCPFM 241
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 75/179 (41%), Gaps = 30/179 (16%)
Query: 81 RNDRFNYVVMQ-LQGKNLAELRRAQ--PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRD 137
++DR+ Y+VM+ + G +L L P T +++ A+++IHS+GF+HRD
Sbjct: 144 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-----EVVLALDAIHSMGFIHRD 198
Query: 138 IKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVR 197
+KP N + + H + + DFG + +R + + +P G
Sbjct: 199 VKPDNMLLDKSGH----LKLADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 254
Query: 198 YASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYASINAHKN 256
Y GR D WS+ L E + + P A GT Y+ I HKN
Sbjct: 255 Y-----------GRECDWWSVGVFLYEML-----VGDTPFYADSLVGT--YSKIMNHKN 295
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/186 (24%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRA 103
ALK + Q + K E+ +L+ L EH+ ++ GC + + + ++ L LR
Sbjct: 50 ALKADCGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY 108
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
PR + L+ L QI + + +HS ++HR++ N L R V + DFGLA
Sbjct: 109 LPRHSIGLAQLLLFAQQICEGMAYLHSQHYIHRNLAARNV----LLDNDRLVKIGDFGLA 164
Query: 164 RQYTTSSELRNFNTTSSGEV--RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
+ E V AP ++ YAS D+WS
Sbjct: 165 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYK--FYYAS-------------DVWSFGVT 209
Query: 222 LVEFVN 227
L E +
Sbjct: 210 LYELLT 215
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 63/148 (42%), Gaps = 19/148 (12%)
Query: 79 CGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDI 138
C ++D Y + KN L+ + G+F + T +I+ A+E +H G +HRD+
Sbjct: 105 CFQDDEKLYFGLSY-AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDL 163
Query: 139 KPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRY 198
KP N + H + + DFG A+ + S+ N F GT +Y
Sbjct: 164 KPENILLNEDMH----IQITDFGTAKVLSPESKQARANX--------------FVGTAQY 205
Query: 199 ASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S K + DLW+L ++ + V
Sbjct: 206 VSPELLTEKSACKSSDLWALGCIIYQLV 233
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 46/179 (25%), Positives = 74/179 (41%), Gaps = 30/179 (16%)
Query: 81 RNDRFNYVVMQ-LQGKNLAELRRAQ--PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRD 137
++DR+ Y+VM+ + G +L L P T +++ A+++IHS+GF+HRD
Sbjct: 139 QDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTA-----EVVLALDAIHSMGFIHRD 193
Query: 138 IKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVR 197
+KP N + + H + DFG + +R + + +P G
Sbjct: 194 VKPDNMLLDKSGHLK----LADFGTCMKMNKEGMVRCDTAVGTPDYISPEVLKSQGGDGY 249
Query: 198 YASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYASINAHKN 256
Y GR D WS+ L E + + P A GT Y+ I HKN
Sbjct: 250 Y-----------GRECDWWSVGVFLYEML-----VGDTPFYADSLVGT--YSKIMNHKN 290
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L G +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 122 YLVTHLMGADLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 175
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 176 -LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 229
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 230 ---------DIWSVGCILAEMLS 243
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 75/175 (42%), Gaps = 25/175 (14%)
Query: 58 KMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLR 116
+ E+ VL + +V ++ G +++M+ L G + +L RA P F ++T L+
Sbjct: 69 QQEITVLSQCDS-SYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK 127
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
+ILK ++ +HS +HRDIK +N L V + DFG+A Q T + RN
Sbjct: 128 ---EILKGLDYLHSEKKIHRDIKAANV----LLSEQGDVKLADFGVAGQLTDTQIKRN-- 178
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + + D+WSL +E + P
Sbjct: 179 --------------TFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 63/141 (44%), Gaps = 25/141 (17%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM G +L +L + + G + L Q+LK + IH+ G +HRD+KP N ++
Sbjct: 106 YLVMPFMGTDLGKLMKHEKLGEDRIQF---LVYQMLKGLRYIHAAGIIHRDLKPGNLAV- 161
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + +LDFGLARQ SE+ T R RA +RY
Sbjct: 162 ---NEDCELKILDFGLARQ--ADSEMXGXVVT-----RWYRAPEVILNWMRYTQTV---- 207
Query: 207 KEMGRHDDLWSLFYMLVEFVN 227
D+WS+ ++ E +
Sbjct: 208 -------DIWSVGCIMAEMIT 221
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 115 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 171
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N+ F GT +Y S K +
Sbjct: 172 -IQITDFGTAKVLSPESKQARANS--------------FVGTAQYVSPELLTEKSACKSS 216
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 217 DLWALGCIIYQLV 229
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 98 YLVMELMDANLXQVIQME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV- 152
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 153 ---KSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 207
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 208 MG-EMVRHKILFP 219
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 160 ---KSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 214
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 215 MG-EMVRHKILFP 226
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 29/142 (20%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 99 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 153
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + +LDFGLAR TS + + T RAP G
Sbjct: 154 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG--------------- 193
Query: 207 KEMGRHD--DLWSLFYMLVEFV 226
MG + DLWS+ ++ E V
Sbjct: 194 --MGYKENVDLWSVGCIMGEMV 213
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLXQVIQME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 160 ---KSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 214
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 215 MG-EMVRHKILFP 226
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 111 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 167
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA + F GT +Y S K +
Sbjct: 168 -IQITDFGTAK-------------VLSPESKQARANS-FVGTAQYVSPELLTEKSACKSS 212
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 213 DLWALGCIIYQLV 225
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 63/142 (44%), Gaps = 29/142 (20%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 110 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 164
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + +LDFGLAR TS + + T RAP G
Sbjct: 165 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILG--------------- 204
Query: 207 KEMGRHD--DLWSLFYMLVEFV 226
MG + DLWS+ ++ E V
Sbjct: 205 --MGYKENVDLWSVGCIMGEMV 224
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 61/145 (42%), Gaps = 21/145 (14%)
Query: 87 YVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+VM +G +L + AQ F L +QI A++ +H LHRDIK N +
Sbjct: 99 YIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLALKHVHDRKILHRDIKSQNIFL 158
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
+ V + DFG+AR ++ EL A GT Y S +
Sbjct: 159 TK----DGTVQLGDFGIARVLNSTVEL----------------ARACIGTPYYLSPEICE 198
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQH 230
NK D+W+L +L E ++H
Sbjct: 199 NKPYNNKSDIWALGCVLYELCTLKH 223
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 107 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 161
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR TS + F T RAP G
Sbjct: 162 ---KSDCTLKILDFGLARTAGTSFMMVPFVVTRY--YRAPEVILGM 202
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLXQVIQME----LDHERMSYLLYQMLXGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 160 ---KSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 214
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 215 MG-EMVRHKILFP 226
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 104 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 158
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 159 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 213
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 214 MG-EMVRHKILFP 225
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 106 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 160
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 161 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 215
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 216 MG-EMVRHKILFP 227
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 99 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 153
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 154 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 208
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 209 MG-EMVRHKILFP 220
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 99 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 153
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 154 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 208
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 209 MG-EMVRHKILFP 220
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 98 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 152
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 153 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 207
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 208 MG-EMVRHKILFP 219
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 160 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 214
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 215 MG-EMVRHKILFP 226
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 106 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 160
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 161 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 215
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 216 MG-EMVRHKILFP 227
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 160 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 214
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 215 MG-EMVRHKILFP 226
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 143 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 197
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 198 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 252
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 253 MG-EMVRHKILFP 264
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 35 HDLVTKENVALK---------VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRF 85
+D + + NVA+K + R ++++ M+V K + G +V F + F
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV--FTPQKSLEEF 101
Query: 86 N--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+L NL+++ + + L Q+L I+ +HS G +HRD+KPSN
Sbjct: 102 QDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + + +LDFGLAR TS + + T RAP G
Sbjct: 158 VV----KSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 35 HDLVTKENVALK---------VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRF 85
+D + + NVA+K + R ++++ M+V K + G +V F + F
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV--FTPQKSLEEF 101
Query: 86 N--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+L NL+++ + + L Q+L I+ +HS G +HRD+KPSN
Sbjct: 102 QDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNI 157
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + + +LDFGLAR TS + + T RAP G
Sbjct: 158 VV----KSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 35 HDLVTKENVALK---------VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRF 85
+D + + NVA+K + R ++++ M+V K + G +V F + F
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV--FTPQKSLEEF 101
Query: 86 N--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+L NL+++ + + L Q+L I+ +HS G +HRD+KPSN
Sbjct: 102 QDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + + +LDFGLAR TS + + T RAP G
Sbjct: 158 VV----KSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 23/169 (13%)
Query: 35 HDLVTKENVALK---------VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRF 85
+D + + NVA+K + R ++++ M+V K + G +V F + F
Sbjct: 44 YDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNV--FTPQKSLEEF 101
Query: 86 N--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+L NL+++ + + L Q+L I+ +HS G +HRD+KPSN
Sbjct: 102 QDVYIVMELMDANLSQVIQME----LDHERMSYLLYQMLVGIKHLHSAGIIHRDLKPSNI 157
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + + +LDFGLAR TS + + T RAP G
Sbjct: 158 VV----KSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 171 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 215
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 216 DLWALGCIIYQLV 228
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 168
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 169 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 213
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 214 DLWALGCIIYQLV 226
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 74/186 (39%), Gaps = 22/186 (11%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRA 103
ALK + Q + K E+ +L+ L EH+ ++ GC + + + ++ L LR
Sbjct: 50 ALKADCGPQHRSGWKQEIDILRTLY-HEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDY 108
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
PR + L+ L QI + + +H+ ++HR++ N L R V + DFGLA
Sbjct: 109 LPRHSIGLAQLLLFAQQICEGMAYLHAQHYIHRNLAARNV----LLDNDRLVKIGDFGLA 164
Query: 164 RQYTTSSELRNFNTTSSGEV--RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
+ E V AP ++ YAS D+WS
Sbjct: 165 KAVPEGHEYYRVREDGDSPVFWYAPECLKEYK--FYYAS-------------DVWSFGVT 209
Query: 222 LVEFVN 227
L E +
Sbjct: 210 LYELLT 215
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 115 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 171
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 172 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 216
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 217 DLWALGCIIYQLV 229
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 171 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 215
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 216 DLWALGCIIYQLV 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR TS + + T RAP G
Sbjct: 160 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 171 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 215
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 216 DLWALGCIIYQLV 228
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL+++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR TS + + T RAP G
Sbjct: 160 ---KSDATLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 106 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 160
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR TS + + T RAP G
Sbjct: 161 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 201
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 13/132 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 143 YLVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 197
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 198 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 252
Query: 205 KNKEMGRHDDLW 216
EM RH L+
Sbjct: 253 MG-EMVRHKILF 263
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 96 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 152
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA F GT +Y S K +
Sbjct: 153 -IQITDFGTAK-------------VLSPESKQARANX-FVGTAQYVSPELLTEKSACKSS 197
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 198 DLWALGCIIYQLV 210
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 62/133 (46%), Gaps = 13/133 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLXQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASINAH 204
+ + +LDFGLAR TS + + T RAP G++ V S+
Sbjct: 160 ---KSDXTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGMGYKENVDIWSVGCI 214
Query: 205 KNKEMGRHDDLWS 217
EM RH L+
Sbjct: 215 MG-EMVRHKILFP 226
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 171 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 215
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 216 DLWALGCIIYQLV 228
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 168
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 169 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 213
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 214 DLWALGCIIYQLV 226
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 111 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 167
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA F GT +Y S K +
Sbjct: 168 -IQITDFGTAK-------------VLSPESKQARANX-FVGTAQYVSPELLTEKSACKSS 212
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 213 DLWALGCIIYQLV 225
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 91 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 147
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA F GT +Y S K +
Sbjct: 148 -IQITDFGTAK-------------VLSPESKQARANX-FVGTAQYVSPELLTEKSACKSS 192
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 193 DLWALGCIIYQLV 205
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 117 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 173
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 174 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 218
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 219 DLWALGCIIYQLV 231
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 112 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 168
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 169 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSACKSS 213
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 214 DLWALGCIIYQLV 226
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 89 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 145
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA F GT +Y S K +
Sbjct: 146 -IQITDFGTAK-------------VLSPESKQARANX-FVGTAQYVSPELLTEKSACKSS 190
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 191 DLWALGCIIYQLV 203
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 114 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 170
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ + S+ N F GT +Y S K +
Sbjct: 171 -IQITDFGTAKVLSPESKQARANX--------------FVGTAQYVSPELLTEKSAXKSS 215
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 216 DLWALGCIIYQLV 228
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 90 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 146
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA F GT +Y S K +
Sbjct: 147 -IQITDFGTAK-------------VLSPESKQARANX-FVGTAQYVSPELLTEKSACKSS 191
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 192 DLWALGCIIYQLV 204
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR TS + + T RAP G
Sbjct: 160 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 58/133 (43%), Gaps = 18/133 (13%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
KN L+ + G+F + T +I+ A+E +H G +HRD+KP N + H
Sbjct: 92 AKNGELLKYIRKIGSFDETCTRFYTAEIVSALEYLHGKGIIHRDLKPENILLNEDMH--- 148
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
+ + DFG A+ S E + RA F GT +Y S K +
Sbjct: 149 -IQITDFGTAK-------------VLSPESKQARANX-FVGTAQYVSPELLTEKSACKSS 193
Query: 214 DLWSLFYMLVEFV 226
DLW+L ++ + V
Sbjct: 194 DLWALGCIIYQLV 206
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ F T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMAGFVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ F T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMAGFVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 52/106 (49%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL+++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLSQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR TS + + T RAP G
Sbjct: 160 ---KSDCTLKILDFGLARTAGTSFMMTPYVVTRY--YRAPEVILGM 200
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 58 KMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLR 116
+ E+ VL + +V ++ G D +++M+ L G + +L P ++T LR
Sbjct: 73 QQEITVLSQCDSP-YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR 131
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
+ILK ++ +HS +HRDIK +N L V + DFG+A Q T + RN
Sbjct: 132 ---EILKGLDYLHSEKKIHRDIKAANV----LLSEHGEVKLADFGVAGQLTDTQIKRN-- 182
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K D+WSL +E + P
Sbjct: 183 --------------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 223
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 58 KMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLR 116
+ E+ VL + +V ++ G D +++M+ L G + +L P ++T LR
Sbjct: 68 QQEITVLSQCDSP-YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR 126
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
+ILK ++ +HS +HRDIK +N L V + DFG+A Q T + RN
Sbjct: 127 ---EILKGLDYLHSEKKIHRDIKAANV----LLSEHGEVKLADFGVAGQLTDTQIKRNX- 178
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K D+WSL +E + P
Sbjct: 179 ---------------FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 218
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 58 KMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLR 116
+ E+ VL + +V ++ G D +++M+ L G + +L P ++T LR
Sbjct: 53 QQEITVLSQCDSP-YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR 111
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
+ILK ++ +HS +HRDIK +N L V + DFG+A Q T + RN
Sbjct: 112 ---EILKGLDYLHSEKKIHRDIKAANV----LLSEHGEVKLADFGVAGQLTDTQIKRNX- 163
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K D+WSL +E + P
Sbjct: 164 ---------------FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ F T RAP +
Sbjct: 150 SNLAVNE----DCELKILDFGLARH--TDDEMAGFVATRW--YRAPEIMLNW-------- 193
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 194 --MHYNQTV----DIWSVGCIMAELLT 214
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/175 (25%), Positives = 73/175 (41%), Gaps = 25/175 (14%)
Query: 58 KMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLR 116
+ E+ VL + +V ++ G D +++M+ L G + +L P ++T LR
Sbjct: 53 QQEITVLSQCDSP-YVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR 111
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
+ILK ++ +HS +HRDIK +N L V + DFG+A Q T + RN
Sbjct: 112 ---EILKGLDYLHSEKKIHRDIKAANV----LLSEHGEVKLADFGVAGQLTDTQIKRN-- 162
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K D+WSL +E + P
Sbjct: 163 --------------TFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP 203
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 103 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 160 SNLAVNE----DSELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 203
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 204 --MHYNQTV----DIWSVGCIMAELLT 224
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 99 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 156 SNLAVNE----DSELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 199
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 200 --MHYNQTV----DIWSVGCIMAELLT 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 108 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 164
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 165 SNLAVNE----DXELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 208
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 209 --MHYNQTV----DIWSVGCIMAELLT 229
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 102 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 159 SNLAVNE----DXELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 202
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 203 --MHYNQTV----DIWSVGCIMAELLT 223
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 102 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 159 SNLAVNE----DXELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 202
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 203 --MHYNQTV----DIWSVGCIMAELLT 223
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 103 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 160 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 203
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 204 --MHYNQTV----DIWSVGCIMAELLT 224
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 104 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T+ E+ + T RAP +
Sbjct: 161 SNLAVNE----DCELKILDFGLARH--TADEMTGYVATRW--YRAPEIMLNW-------- 204
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 205 --MHYNQTV----DIWSVGCIMAELLT 225
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 104 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T+ E+ + T RAP +
Sbjct: 161 SNLAVNE----DCELKILDFGLARH--TADEMTGYVATRW--YRAPEIMLNW-------- 204
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 205 --MHYNQTV----DIWSVGCIMAELLT 225
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 67/147 (45%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 104 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T+ E+ + T RAP +
Sbjct: 161 SNLAVNE----DCELKILDFGLARH--TADEMTGYVATRW--YRAPEIMLNW-------- 204
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 205 --MHYNQTV----DIWSVGCIMAELLT 225
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 103 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 160 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 203
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 204 --MHYNQTV----DIWSVGCIMAELLT 224
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 61/140 (43%), Gaps = 25/140 (17%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YLVMELMDANLCQVIHME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + +LDFGLAR T NF T R RA G A++
Sbjct: 160 ---KSDCTLKILDFGLARTACT-----NFMMTPYVVTRYYRAPEVILGMGYAANV----- 206
Query: 207 KEMGRHDDLWSLFYMLVEFV 226
D+WS+ ++ E V
Sbjct: 207 -------DIWSVGCIMGELV 219
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/256 (23%), Positives = 107/256 (41%), Gaps = 38/256 (14%)
Query: 35 HDLVTKENVALK--VESARQPKQVLKMEVAVLKKLQGKEHVCRF-----IGCGRND---- 83
D+ + ALK + + + + + EV +KKL G ++ +F IG +D
Sbjct: 48 QDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQA 107
Query: 84 RFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIH--SVGFLHRDIKPS 141
F + +G+ + L++ + RG S T L++ Q +A++ +H +HRD+K
Sbjct: 108 EFLLLTELCKGQLVEFLKKMESRGPLSCDTVLKIFYQTCRAVQHMHRQKPPIIHRDLKVE 167
Query: 142 NFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRY--- 198
N L + + DFG A TT S ++ + S + RA R T
Sbjct: 168 NL----LLSNQGTIKLCDFGSA---TTISHYPDY--SWSAQRRALVEEEITRNTTPMYRT 218
Query: 199 -ASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYASINAHKNK 257
I+ + N +G D+W+L +L QHP F + +N +
Sbjct: 219 PEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHP----------FEDGAKLRIVNGKYS- 267
Query: 258 EMGRHDDLWSLFYMLV 273
+ HD +++F+ L+
Sbjct: 268 -IPPHDTQYTVFHSLI 282
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 117 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 174 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 217
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 218 --MHYNQTV----DIWSVGCIMAELLT 238
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 116 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 173 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 216
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 217 --MHYNQTV----DIWSVGCIMAELLT 237
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 99 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 156 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 199
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 200 --MHYNQTV----DIWSVGCIMAELLT 220
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/183 (24%), Positives = 81/183 (44%), Gaps = 24/183 (13%)
Query: 59 MEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS-----T 113
ME+ +L + +V R+ DRF Y+ ++L NL +L ++ +L
Sbjct: 57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRL------QHT---SRRVYMLDFGLAR 164
+ L QI + +HS+ +HRD+KP N + Q T + R+ + DFGL +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGT-VRYASINAHKNKEMGRHDDLWSL---FY 220
+ + +F T + P +G+R + S N + + R D++S+ FY
Sbjct: 177 KLDSGQS--SFRTN----LNNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 221 MLV 223
++
Sbjct: 231 YIL 233
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 117 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 174 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 217
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 218 --MHYNQTV----DIWSVGCIMAELLT 238
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 107 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 163
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 164 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 207
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 208 --MHYNQTV----DIWSVGCIMAELLT 228
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 99 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 156 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 199
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 200 --MHYNQTV----DIWSVGCIMAELLT 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 116 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 172
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 173 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 216
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 217 --MHYNQTV----DIWSVGCIMAELLT 237
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 102 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 159 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 202
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 203 --MHYNQTV----DIWSVGCIMAELLT 223
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 103 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 159
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 160 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 203
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 204 --MHYNQTV----DIWSVGCIMAELLT 224
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 96 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 152
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 153 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 196
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 197 --MHYNQTV----DIWSVGCIMAELLT 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 99 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 155
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 156 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 199
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 200 --MHYNQTV----DIWSVGCIMAELLT 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 102 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 158
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 159 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 202
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 203 --MHYNQTV----DIWSVGCIMAELLT 223
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 108 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 164
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 165 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 208
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 209 --MHYNQTV----DIWSVGCIMAELLT 229
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 104 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 160
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 161 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 204
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 205 --MHYNQTV----DIWSVGCIMAELLT 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 150 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 193
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 194 --MHYNQTV----DIWSVGCIMAELLT 214
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 120 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 176
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 177 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 220
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 221 --MHYNQTV----DIWSVGCIMAELLT 241
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 106 YIVQDLMETDLYKLLKCQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 160 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 213
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 214 ---------DIWSVGCILAEMLS 227
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 109 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 166 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 209
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 210 --MHYNQTV----DIWSVGCIMAELLT 230
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 95 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 151
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 152 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 195
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 196 --MHYNQTV----DIWSVGCIMAELLT 216
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 66/146 (45%), Gaps = 27/146 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 120 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 176
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 177 SNLAVNE----DCELKILDFGLARH--TDDEMXGYVATRW--YRAPEIMLNW-------- 220
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFV 226
H N+ + D+WS+ ++ E +
Sbjct: 221 --MHYNQTV----DIWSVGCIMAELL 240
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 106 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 160 -LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 213
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 214 ---------DIWSVGCILAEMLS 227
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 104 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 157
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 158 -LLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 211
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 212 ---------DIWSVGCILAEMLS 225
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 109 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 166 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 209
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 210 --MHYNQTV----DIWSVGCIMAELLT 230
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 109 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 165
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 166 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 209
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 210 --MHYNQTV----DIWSVGCIMAELLT 230
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 94 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 150
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 151 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 194
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 195 --MHYNQTV----DIWSVGCIMAELLT 215
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 39 TKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QG 94
T++ VA+K E+ + ++ E+AVL K++ ++ + Y++MQL G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
L R +G ++ RL Q+L A++ +H +G +HRD+KP N L S +
Sbjct: 101 GEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS-K 157
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ + DFGL++ S L +T+ GT Y + K + D
Sbjct: 158 IMISDFGLSKMEDPGSVL----STAC-------------GTPGYVAPEVLAQKPYSKAVD 200
Query: 215 LWSL 218
WS+
Sbjct: 201 CWSI 204
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 102 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 155
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 156 -LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 209
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 210 ---------DIWSVGCILAEMLS 223
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 94 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 150
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 151 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 194
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 195 --MHYNQTV----DIWSVGCIMAELLT 215
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DXELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 150 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 193
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 194 --MHYNQTV----DIWSVGCIMAELLT 214
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/196 (23%), Positives = 83/196 (42%), Gaps = 21/196 (10%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR 102
A+K+ S R K E+ LK +G ++ + + ++VM+L G L E R
Sbjct: 40 AVKIISKRMEANTQK-EITALKLCEGHPNIVKLHEVFHDQLHTFLVMELLNGGELFE--R 96
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
+ + FS + + +++ A+ +H VG +HRD+KP N ++ + + ++DFG
Sbjct: 97 IKKKKHFSETEASYIMRKLVSAVSHMHDVGVVHRDLKPENLLFTD-ENDNLEIKIIDFGF 155
Query: 163 ARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYML 222
AR ++ P F T+ YA+ DLWSL +L
Sbjct: 156 ARLKPPDNQ--------------PLKTPCF--TLHYAAPELLNQNGYDESCDLWSLGVIL 199
Query: 223 VEFVNIQHPLVKAPRA 238
++ Q P R+
Sbjct: 200 YTMLSGQVPFQSHDRS 215
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 29/148 (19%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIM----------- 194
Query: 201 INA-HKNKEMGRHDDLWSLFYMLVEFVN 227
+NA H N+ + D+WS+ ++ E +
Sbjct: 195 LNAMHYNQTV----DIWSVGCIMAELLT 218
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 106 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 160 -LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 213
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 214 ---------DIWSVGCILAEMLS 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 102 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 155
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 156 -LLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 209
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 210 ---------DIWSVGCILAEMLS 223
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/183 (23%), Positives = 79/183 (43%), Gaps = 24/183 (13%)
Query: 59 MEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS-----T 113
ME+ +L + +V R+ DRF Y+ ++L NL +L ++ +L
Sbjct: 57 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 116
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRL------QHT---SRRVYMLDFGLAR 164
+ L QI + +HS+ +HRD+KP N + Q T + R+ + DFGL +
Sbjct: 117 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 176
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGT-VRYASINAHKNKEMGRHDDLWSL---FY 220
+ + N + P +G+R + S N + + R D++S+ FY
Sbjct: 177 KLDSGQXXFRXNLNN------PSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFY 230
Query: 221 MLV 223
++
Sbjct: 231 YIL 233
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 85/197 (43%), Gaps = 28/197 (14%)
Query: 39 TKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQG 94
TKE VA+K+ E A + ++ E+ VL + ++ R+ G +++M+ L G
Sbjct: 43 TKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSP-YITRYFGSYLKSTKLWIIMEYLGG 101
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
+ +L + P ++T LR +ILK ++ +HS +HRDIK +N L
Sbjct: 102 GSALDLLKPGPLEETYIATILR---EILKGLDYLHSERKIHRDIKAANV----LLSEQGD 154
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
V + DFG+A Q T + RN F GT + + K D
Sbjct: 155 VKLADFGVAGQLTDTQIKRN----------------XFVGTPFWMAPEVIKQSAYDFKAD 198
Query: 215 LWSLFYMLVEFVNIQHP 231
+WSL +E + P
Sbjct: 199 IWSLGITAIELAKGEPP 215
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 62/142 (43%), Gaps = 29/142 (20%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + +LDFGLAR TS + T RAP G
Sbjct: 160 ---KSDCTLKILDFGLARTAGTSFMMEPEVVTRY--YRAPEVILG--------------- 199
Query: 207 KEMGRHD--DLWSLFYMLVEFV 226
MG + DLWS+ ++ E V
Sbjct: 200 --MGYKENVDLWSVGCIMGEMV 219
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 39 TKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QG 94
T++ VA+K E+ + ++ E+AVL K++ ++ + Y++MQL G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
L R +G ++ RL Q+L A++ +H +G +HRD+KP N L S +
Sbjct: 101 GEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS-K 157
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ + DFGL++ S L +T+ GT Y + K + D
Sbjct: 158 IMISDFGLSKMEDPGSVL----STAC-------------GTPGYVAPEVLAQKPYSKAVD 200
Query: 215 LWSL 218
WS+
Sbjct: 201 CWSI 204
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/184 (25%), Positives = 82/184 (44%), Gaps = 25/184 (13%)
Query: 39 TKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QG 94
T++ VA+K E+ + ++ E+AVL K++ ++ + Y++MQL G
Sbjct: 42 TQKLVAIKCIAKEALEGKEGSMENEIAVLHKIK-HPNIVALDDIYESGGHLYLIMQLVSG 100
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
L R +G ++ RL Q+L A++ +H +G +HRD+KP N L S +
Sbjct: 101 GEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDS-K 157
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ + DFGL++ S L +T+ GT Y + K + D
Sbjct: 158 IMISDFGLSKMEDPGSVL----STAC-------------GTPGYVAPEVLAQKPYSKAVD 200
Query: 215 LWSL 218
WS+
Sbjct: 201 CWSI 204
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/180 (23%), Positives = 77/180 (42%), Gaps = 21/180 (11%)
Query: 45 LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQ 104
L+ + + K++ E+ +LK+L+ + V C + R+ Y+V + + +
Sbjct: 59 LESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVCKKKKRW-YLVFEFVDHTILDDLELF 117
Query: 105 PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
P G + QI+ I HS +HRDIKP N + + S V + DFG AR
Sbjct: 118 PNG-LDYQVVQKYLFQIINGIGFCHSHNIIHRDIKPENILVSQ----SGVVKLCDFGFAR 172
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVE 224
E+ + + ++ RAP G V+Y G+ D+W++ ++ E
Sbjct: 173 TLAAPGEVYD-DEVATRWYRAPELLV---GDVKY-----------GKAVDVWAIGCLVTE 217
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 110 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 163
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 164 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 217
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 218 ---------DIWSVGCILAEMLS 231
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 102 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 155
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 156 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 209
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 210 ---------DIWSVGCILAEMLS 223
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 100 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 153
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 154 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 207
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 208 ---------DIWSVGCILAEMLS 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 100 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 153
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 154 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 207
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 208 ---------DIWSVGCILAEMLS 221
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 51/106 (48%), Gaps = 10/106 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 103 YLVMELMDANLCQVIHME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 157
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+ + +LDFGLAR +T+ + + T RAP G
Sbjct: 158 ---KSDCTLKILDFGLARTASTNFMMTPYVVTRY--YRAPEVILGM 198
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 104 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 157
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 158 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 211
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 212 ---------DIWSVGCILAEMLS 225
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 104 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 157
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 158 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 211
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 212 ---------DIWSVGCILAEMLS 225
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 65/143 (45%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L ++Q S QIL+ ++ IHS LHRD+KPSN I
Sbjct: 122 YIVQDLMETDLYKLLKSQ---QLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNLLI- 177
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
+T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 178 ---NTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTK--SI--- 229
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 230 ---------DIWSVGCILAEMLS 243
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKXQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 122 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 175
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 176 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 229
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 230 ---------DIWSVGCILAEMLS 243
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 107 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 160
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 161 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 214
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 215 ---------DIWSVGCILAEMLS 228
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 108 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 161
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 162 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 215
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 216 ---------DIWSVGCILAEMLS 229
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 99 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 152
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 153 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 206
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 207 ---------DIWSVGCILAEMLS 220
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 106 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 160 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 213
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 214 ---------DIWSVGCILAEMLS 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 102 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 155
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 156 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 209
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 210 ---------DIWSVGCILAEMLS 223
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 106 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 160 -LLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 213
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 214 ---------DIWSVGCILAEMLS 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/143 (29%), Positives = 64/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 102 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 155
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNT--TSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F T ++ RAP +G + SI
Sbjct: 156 -LLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRWYRAPEIMLNSKGYTK--SI--- 209
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 210 ---------DIWSVGCILAEMLS 223
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + ++Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKSQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGL R T E+ + T RAP +
Sbjct: 154 SNLAVNE----DSELKILDFGLCRH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTS 169
+ + +LDFGLAR TS
Sbjct: 160 ---KSDCTLKILDFGLARTAGTS 179
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 35/159 (22%), Positives = 74/159 (46%), Gaps = 8/159 (5%)
Query: 14 KERWKVIRKXXXXXXXXXXXXHDLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHV 73
++ ++++RK ++ E V +K+ + K +K E+ +L+ L+G ++
Sbjct: 36 QDDYQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK-KNKIKREIKILENLRGGPNI 94
Query: 74 CRFIGCGRNDRFNYVVMQLQGKNLAELRRA-QPRGAFSLSTTLRLGIQILKAIESIHSVG 132
++ + + N + ++ Q + + + +ILKA++ HS+G
Sbjct: 95 ITLADIVKDPVSRTPALVFEHVNNTDFKQLYQTLTDYDIRFYM---YEILKALDYCHSMG 151
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 152 IMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 55 QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLST 113
Q L+ E + +KLQ ++ R + + F+Y+V L G L E A R +S +
Sbjct: 50 QKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEAD 106
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL++I HS G +HR++KP N + + V + DFGLA
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS-KAKGAAVKLADFGLAI--------- 156
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEF 225
EV A GF GT Y S K + D+W+ L+ +LV +
Sbjct: 157 --------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 57/109 (52%), Gaps = 5/109 (4%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTTL 115
L+ E+AVLKK++ E++ + Y+VMQL G L R RG ++
Sbjct: 53 LENEIAVLKKIK-HENIVTLEDIYESTTHYYLVMQLVSGGEL--FDRILERGVYTEKDAS 109
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
+ Q+L A++ +H G +HRD+KP N + S ++ + DFGL++
Sbjct: 110 LVIQQVLSAVKYLHENGIVHRDLKPENLLYLTPEENS-KIMITDFGLSK 157
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 126 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 182
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 183 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 226
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N + D+WS+ ++ E +
Sbjct: 227 --MHYNMTV----DIWSVGCIMAELLT 247
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 8/83 (9%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM+L NL ++ + + L Q+L I+ +HS G +HRD+KPSN +
Sbjct: 105 YIVMELMDANLCQVIQME----LDHERMSYLLYQMLCGIKHLHSAGIIHRDLKPSNIVV- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTS 169
+ + +LDFGLAR TS
Sbjct: 160 ---KSDCTLKILDFGLARTAGTS 179
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 59/133 (44%), Gaps = 21/133 (15%)
Query: 87 YVVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y++MQL G L R +G ++ RL Q+L A++ +H +G +HRD+KP N
Sbjct: 92 YLIMQLVSGGEL--FDRIVEKGFYTERDASRLIFQVLDAVKYLHDLGIVHRDLKPENLLY 149
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L S ++ + DFGL++ S L +T+ GT Y +
Sbjct: 150 YSLDEDS-KIMISDFGLSKMEDPGSVL----STAC-------------GTPGYVAPEVLA 191
Query: 206 NKEMGRHDDLWSL 218
K + D WS+
Sbjct: 192 QKPYSKAVDCWSI 204
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LD+GLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDYGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 55 QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLST 113
Q L+ E + +KLQ ++ R + + F+Y+V L G L E A R +S +
Sbjct: 50 QKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEAD 106
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL++I HS G +HR++KP N + + V + DFGLA
Sbjct: 107 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS-KAKGAAVKLADFGLAI--------- 156
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEF 225
EV A GF GT Y S K + D+W+ L+ +LV +
Sbjct: 157 --------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 204
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 55 QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLST 113
Q L+ E + +KLQ ++ R + + F+Y+V L G L E A R +S +
Sbjct: 49 QKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEAD 105
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL++I HS G +HR++KP N + + V + DFGLA
Sbjct: 106 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS-KAKGAAVKLADFGLAI--------- 155
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEF 225
EV A GF GT Y S K + D+W+ L+ +LV +
Sbjct: 156 --------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 203
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIG--CGRNDRFNYVVMQ-LQGKNLAEL--RRAQPRGA 108
KQ+L EV +L++L+ ++ R+ R + Y+VM+ +G +LA + + + R
Sbjct: 49 KQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 109 FSLSTTLRLGIQILKAIESIH--SVG---FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
LR+ Q+ A++ H S G LHRD+KP+N + Q+ V + DFGLA
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN----VKLGDFGLA 163
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLV 223
R + N +T+ A F GT Y S D+WSL +L
Sbjct: 164 R-------ILNHDTS---------FAKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 224 EFVNIQHPLV 233
E + P
Sbjct: 208 ELCALMPPFT 217
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 75/176 (42%), Gaps = 26/176 (14%)
Query: 55 QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLST 113
Q L+ E + +KLQ ++ R + + F+Y+V L G L E A R +S +
Sbjct: 73 QKLEREARICRKLQ-HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVA--REFYSEAD 129
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL++I HS G +HR++KP N + + V + DFGLA
Sbjct: 130 ASHCIQQILESIAYCHSNGIVHRNLKPENLLLAS-KAKGAAVKLADFGLAI--------- 179
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEF 225
EV A GF GT Y S K + D+W+ L+ +LV +
Sbjct: 180 --------EVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 28 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 86
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 87 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 140
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 141 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 186
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 187 VDVWSCGIVLTAMLAGELP 205
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 106 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 159
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNF--NTTSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F ++ RAP +G + SI
Sbjct: 160 -LLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK--SI--- 213
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 214 ---------DIWSVGCILAEMLS 227
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 45/186 (24%), Positives = 75/186 (40%), Gaps = 34/186 (18%)
Query: 74 CRFIGCGRNDRFNYVVMQ-LQGKNLAELRRAQ--PRGAFSLSTTLRLGIQILKAIESIHS 130
C F ++D++ Y+VM+ + G +L L P T +++ A+++IHS
Sbjct: 142 CAF----QDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTA-----EVVLALDAIHS 192
Query: 131 VGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAA 190
+G +HRD+KP N + + H + DFG + + + + + +P
Sbjct: 193 MGLIHRDVKPDNMLLDKHGHLK----LADFGTCMKMDETGMVHCDTAVGTPDYISPEVLK 248
Query: 191 GFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYAS 250
G Y GR D WS+ L E + + P A GT Y+
Sbjct: 249 SQGGDGYY-----------GRECDWWSVGVFLFEML-----VGDTPFYADSLVGT--YSK 290
Query: 251 INAHKN 256
I HKN
Sbjct: 291 IMDHKN 296
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 63/143 (44%), Gaps = 23/143 (16%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V L +L +L + Q S QIL+ ++ IHS LHRD+KPSN
Sbjct: 107 YIVQDLMETDLYKLLKTQ---HLSNDHICYFLYQILRGLKYIHSANVLHRDLKPSNL--- 160
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNF--NTTSSGEVRAPRAAAGFRGTVRYASINAH 204
L +T+ + + DFGLAR + F ++ RAP +G + SI
Sbjct: 161 -LLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIMLNSKGYTK--SI--- 214
Query: 205 KNKEMGRHDDLWSLFYMLVEFVN 227
D+WS+ +L E ++
Sbjct: 215 ---------DIWSVGCILAEMLS 228
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNK--------------MXGTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 61/135 (45%), Gaps = 26/135 (19%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR-QYTTSSELRNFNT 177
+ + KA++ IH G +HRD+KPSNF R ++ ++DFGLA+ + T EL F
Sbjct: 124 LNLFKALKRIHQFGIVHRDVKPSNFLYNR---RLKKYALVDFGLAQGTHDTKIELLKFVQ 180
Query: 178 TSSGEVR----------------APRAAA-GFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
+ + + R APRA GFR A K D+WS
Sbjct: 181 SEAQQERCSQNKCSICLSRRQQVAPRAGTPGFR-----APEVLTKCPNQTTAIDMWSAGV 235
Query: 221 MLVEFVNIQHPLVKA 235
+ + ++ ++P KA
Sbjct: 236 IFLSLLSGRYPFYKA 250
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNK--------------MXGTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ ++ RAP +
Sbjct: 154 SNLAVNE----DCELKILDFGLARH--TDDEMT--GXVATRWYRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNK--------------MXGTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 66/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 117 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 173
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ ++ RAP +
Sbjct: 174 SNLAVNE----DCELKILDFGLARH--TDDEMX--GXVATRWYRAPEIMLNW-------- 217
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 218 --MHYNQTV----DIWSVGCIMAELLT 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 11/190 (5%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRND-RFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLG 118
EV L + QG +++ I +D RF V +LQG ++ L Q + F+ R+
Sbjct: 60 EVETLYQCQGNKNILELIEFFEDDTRFYLVFEKLQGGSI--LAHIQKQKHFNEREASRVV 117
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ A++ +H+ G HRD+KP N + S V + DF L + +L N T
Sbjct: 118 RDVAAALDFLHTKGIAHRDLKPENILCESPEKVS-PVKICDFDLG----SGMKLNNSCTP 172
Query: 179 -SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPR 237
++ E+ P +A + + + + DLWSL +L ++ P V
Sbjct: 173 ITTPELTTPCGSAEYMAP-EVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPFVGHCG 231
Query: 238 AAAGF-RGTV 246
A G+ RG V
Sbjct: 232 ADCGWDRGEV 241
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + + L QIL+ ++ IHS +HRD+KP
Sbjct: 93 EEFNDVYLVTHLMGADLNNIVKC---AKLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 149
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDFGLAR T E+ + T RAP +
Sbjct: 150 SNLAVNE----DCELKILDFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 193
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 194 --MHYNQTV----DIWSVGCIMAELLT 214
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/114 (28%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
L L QI K ++ IHS +HRD+KPSN + +++V + DFGL
Sbjct: 139 LELFEQITKGVDYIHSKKLIHRDLKPSNIFLV----DTKQVKIGDFGLV----------- 183
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
T+ + + R+ +GT+RY S +++ G+ DL++L +L E +++
Sbjct: 184 --TSLKNDGKRTRS----KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV 231
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 31/190 (16%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIG--CGRNDRFNYVVMQ-LQGKNLAEL--RRAQPRGA 108
KQ+L EV +L++L+ ++ R+ R + Y+VM+ +G +LA + + + R
Sbjct: 49 KQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 109 FSLSTTLRLGIQILKAIESIH--SVG---FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
LR+ Q+ A++ H S G LHRD+KP+N + Q+ V + DFGLA
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN----VKLGDFGLA 163
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLV 223
R + N +T+ A F GT Y S D+WSL +L
Sbjct: 164 R-------ILNHDTS---------FAKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 224 EFVNIQHPLV 233
E + P
Sbjct: 208 ELCALMPPFT 217
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 186
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 137 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 185
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 144 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 192
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 138 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 186
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVMI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNK--------------MXGTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/199 (24%), Positives = 82/199 (41%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + K+ E+V +F G R Y+ ++
Sbjct: 29 VTEEAVAVKIVDMKRAVDCPENIKKEIXI-NKMLNHENVVKFYGHRREGNIQYLFLEYCS 87
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 88 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 141
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 142 NLKISDFGLATVFRYNNRERLLNK--------------MXGTLPYVAPELLKRREFHAEP 187
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 188 VDVWSCGIVLTAMLAGELP 206
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
+ILKA++ HS+G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 139 EILKALDYCHSMGIMHRDVKPHNVLI---DHEHRKLRLIDWGLAEFYHPGQE 187
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 47.8 bits (112), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM +L ++ + FS L Q+LK ++ IHS G +HRD+KP N ++
Sbjct: 123 YLVMPFMQTDLQKIMGME----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 178
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ +LDFGLAR +E+ + T RAP + H N
Sbjct: 179 E----DCELKILDFGLARH--ADAEMTGYVVTRW--YRAPEVILSW----------MHYN 220
Query: 207 KEMGRHDDLWSLFYMLVEFVN 227
+ + D+WS+ ++ E +
Sbjct: 221 QTV----DIWSVGCIMAEMLT 237
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 60 EVAVLKKLQGKEH--VCR-FIGC--GRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLS 112
EVAVL+ L+ EH V R F C R DR + + + ++L P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
T + Q+L+ ++ +HS +HRD+KP N L +S ++ + DFGLAR Y+ L
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI----LVTSSGQIKLADFGLARIYSFQMAL 176
Query: 173 RNFNTT 178
+ T
Sbjct: 177 TSVVVT 182
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 40 KENVALKV-ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNY-----VVMQLQ 93
K VALK+ + + ++ ++E+ VLKK++ K+ +F+ +D FN+ + +L
Sbjct: 45 KSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL 104
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSN 142
GKN E + + L + Q+ A+ +H H D+KP N
Sbjct: 105 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 153
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 60/126 (47%), Gaps = 11/126 (8%)
Query: 60 EVAVLKKLQGKEH--VCR-FIGC--GRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLS 112
EVAVL+ L+ EH V R F C R DR + + + ++L P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
T + Q+L+ ++ +HS +HRD+KP N L +S ++ + DFGLAR Y+ L
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI----LVTSSGQIKLADFGLARIYSFQMAL 176
Query: 173 RNFNTT 178
+ T
Sbjct: 177 TSVVVT 182
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNL-AELRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L + L++ +
Sbjct: 64 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 123
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 124 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 173
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---------- 213
Q +TTS V+ + GTV Y A K+ R +
Sbjct: 174 NQMQP-------DTTSV--VKDSQV-----GTVNYMPPEAIKDMSSSRENGKSKSKISPK 219
Query: 214 -DLWS----LFYM 221
D+WS L+YM
Sbjct: 220 SDVWSLGCILYYM 232
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 57/115 (49%), Gaps = 11/115 (9%)
Query: 60 EVAVLKKLQGKEH--VCR-FIGC--GRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLS 112
EVAVL+ L+ EH V R F C R DR + + + ++L P
Sbjct: 61 EVAVLRHLETFEHPNVVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTE 120
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
T + Q+L+ ++ +HS +HRD+KP N L +S ++ + DFGLAR Y+
Sbjct: 121 TIKDMMFQLLRGLDFLHSHRVVHRDLKPQNI----LVTSSGQIKLADFGLARIYS 171
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 60/120 (50%), Gaps = 12/120 (10%)
Query: 53 PKQVLK-------MEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQ 104
PK+ LK E+AVL+K++ E++ + Y+VMQL G L R
Sbjct: 56 PKKALKGKESSIENEIAVLRKIK-HENIVALEDIYESPNHLYLVMQLVSGGEL--FDRIV 112
Query: 105 PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
+G ++ L Q+L A+ +H +G +HRD+KP N + Q ++ + DFGL++
Sbjct: 113 EKGFYTEKDASTLIRQVLDAVYYLHRMGIVHRDLKPENL-LYYSQDEESKIMISDFGLSK 171
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 40 KENVALKV-ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNY-----VVMQLQ 93
K VALK+ + + ++ ++E+ VLKK++ K+ +F+ +D FN+ + +L
Sbjct: 54 KSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL 113
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSN 142
GKN E + + L + Q+ A+ +H H D+KP N
Sbjct: 114 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 162
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/109 (26%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 40 KENVALKV-ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNY-----VVMQLQ 93
K VALK+ + + ++ ++E+ VLKK++ K+ +F+ +D FN+ + +L
Sbjct: 77 KSQVALKIIRNVGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWFNFHGHMCIAFELL 136
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSN 142
GKN E + + L + Q+ A+ +H H D+KP N
Sbjct: 137 GKNTFEFLKENNFQPYPLPHVRHMAYQLCHALRFLHENQLTHTDLKPEN 185
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNL-AELRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L + L++ +
Sbjct: 92 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 151
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 152 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 201
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---------- 213
Q +TTS V+ + GTV Y A K+ R +
Sbjct: 202 NQMQP-------DTTSV--VKDSQV-----GTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 214 -DLWS----LFYM 221
D+WS L+YM
Sbjct: 248 SDVWSLGCILYYM 260
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 26/141 (18%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+VM +L ++ + FS L Q+LK ++ IHS G +HRD+KP N ++
Sbjct: 105 YLVMPFMQTDLQKIMGLK----FSEEKIQYLVYQMLKGLKYIHSAGVVHRDLKPGNLAVN 160
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ +LDFGLAR +E+ + T RAP + H N
Sbjct: 161 E----DCELKILDFGLARH--ADAEMTGYVVTRW--YRAPEVILSW----------MHYN 202
Query: 207 KEMGRHDDLWSLFYMLVEFVN 227
+ + D+WS+ ++ E +
Sbjct: 203 QTV----DIWSVGCIMAEMLT 219
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 143 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 186
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNL-AELRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L + L++ +
Sbjct: 45 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 104
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 105 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 154
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---------- 213
Q +TTS V+ + GTV Y A K+ R +
Sbjct: 155 NQMQP-------DTTSV--VKDSQV-----GTVNYMPPEAIKDMSSSRENGKSKSKISPK 200
Query: 214 -DLWS----LFYM 221
D+WS L+YM
Sbjct: 201 SDVWSLGCILYYM 213
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNL-AELRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L + L++ +
Sbjct: 44 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 103
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 104 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 153
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---------- 213
Q +TTS V+ + GTV Y A K+ R +
Sbjct: 154 NQMQP-------DTTSV--VKDSQV-----GTVNYMPPEAIKDMSSSRENGKSKSKISPK 199
Query: 214 -DLWS----LFYM 221
D+WS L+YM
Sbjct: 200 SDVWSLGCILYYM 212
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 86/193 (44%), Gaps = 43/193 (22%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNL-AELRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L + L++ +
Sbjct: 48 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 107
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 108 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 157
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---------- 213
Q +TTS V+ + GTV Y A K+ R +
Sbjct: 158 NQMQP-------DTTSV--VKDSQV-----GTVNYMPPEAIKDMSSSRENGKSKSKISPK 203
Query: 214 -DLWS----LFYM 221
D+WS L+YM
Sbjct: 204 SDVWSLGCILYYM 216
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/239 (22%), Positives = 95/239 (39%), Gaps = 31/239 (12%)
Query: 1 MSSEDLLQQGHIV------KERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQP 53
MS E++L++ I+ K+++ K D+ T + VA++ + +QP
Sbjct: 1 MSDEEILEKLRIIVSVGDPKKKYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQP 60
Query: 54 KQVLKM-EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS 112
K+ L + E+ V+++ + V D V+ L G +L ++ ++
Sbjct: 61 KKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA 120
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
R + L+A+E +HS +HR+IK N +G V + DFG Q T
Sbjct: 121 AVCR---ECLQALEFLHSNQVIHRNIKSDNILLG----MDGSVKLTDFGFCAQITPEQSK 173
Query: 173 RNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
R + GT + + K G D+WSL M +E + + P
Sbjct: 174 R----------------STMVGTPYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPP 216
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V +
Sbjct: 31 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM 88
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 89 DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 144
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 145 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 188
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/118 (28%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 116 RLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
++ + I+KA+E +HS + +HRD+KPSN I L +V M DFG++ Y S +
Sbjct: 157 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKMCDFGIS-GYLVDSVAKT 211
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKN-KEMGRHDDLWSLFYMLVEFVNIQHP 231
+ AG + + IN N K D+WSL ++E ++ P
Sbjct: 212 ID-------------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +L FGLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILGFGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V +
Sbjct: 32 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 90 DLKDFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 145
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 146 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 189
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/199 (24%), Positives = 81/199 (40%), Gaps = 26/199 (13%)
Query: 38 VTKENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQ 93
VT+E VA+K+ + A + +K E+ + + E+V +F G R Y+ ++
Sbjct: 30 VTEEAVAVKIVDMKRAVDCPENIKKEICI-NAMLNHENVVKFYGHRREGNIQYLFLEYCS 88
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L + R +P R Q++ + +H +G HRDIKP N L
Sbjct: 89 GGELFD--RIEPDIGMPEPDAQRFFHQLMAGVVYLHGIGITHRDIKPENL----LLDERD 142
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRH 212
+ + DFGLA + ++ R N GT+ Y + K +E
Sbjct: 143 NLKISDFGLATVFRYNNRERLLNKMC--------------GTLPYVAPELLKRREFHAEP 188
Query: 213 DDLWSLFYMLVEFVNIQHP 231
D+WS +L + + P
Sbjct: 189 VDVWSCGIVLTAMLAGELP 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LDF LAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDFYLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|2ZMC|A Chain A, Crystal Structure Of Human Mitotic Checkpoint Kinase Mps1
Catalytic Domain Apo Form
Length = 390
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 85/193 (44%), Gaps = 43/193 (22%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNLAE-LRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L L++ +
Sbjct: 92 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 151
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 152 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 201
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---------- 213
Q +TTS V+ + GTV Y A K+ R +
Sbjct: 202 NQMQP-------DTTSV--VKDSQV-----GTVNYMPPEAIKDMSSSRENGKSKSKISPK 247
Query: 214 -DLWS----LFYM 221
D+WS L+YM
Sbjct: 248 SDVWSLGCILYYM 260
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LD GLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDAGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLSFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 187
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 30 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 143
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 144 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 187
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 20/150 (13%)
Query: 59 MEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS-----T 113
ME+ +L + +V R+ DRF Y+ ++L NL +L ++ +L
Sbjct: 75 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRL------QHT---SRRVYMLDFGLAR 164
+ L QI + +HS+ +HRD+KP N + Q T + R+ + DFGL +
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRG 194
+ + N + P +G+R
Sbjct: 195 KLDSGQXXFRXNLNN------PSGTSGWRA 218
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 187
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 143 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 186
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 36 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 94 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 149
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 150 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 194
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 195 WSLGCIFAEMVT 206
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 30 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI----NTEGAI 143
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 144 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 187
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 143 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 186
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/150 (24%), Positives = 64/150 (42%), Gaps = 20/150 (13%)
Query: 59 MEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS-----T 113
ME+ +L + +V R+ DRF Y+ ++L NL +L ++ +L
Sbjct: 75 MEIKLLTESDDHPNVIRYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYN 134
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRL------QHT---SRRVYMLDFGLAR 164
+ L QI + +HS+ +HRD+KP N + Q T + R+ + DFGL +
Sbjct: 135 PISLLRQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCK 194
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRG 194
+ + N + P +G+R
Sbjct: 195 KLDSGQXXFRXNLNN------PSGTSGWRA 218
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 33 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 91 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 146
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 147 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 191
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 192 WSLGCIFAEMVT 203
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 25/198 (12%)
Query: 36 DLVTKENVALK-VESARQPKQVLKM-EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ 93
D+ T + VA++ + +QPK+ L + E+ V+++ + V D V+ L
Sbjct: 41 DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G +L ++ ++ R + L+A+E +HS +HRDIK N +G
Sbjct: 101 GGSLTDVVTETCMDEGQIAAVCR---ECLQALEFLHSNQVIHRDIKSDNILLG----MDG 153
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
V + DFG Q T R + GT + + K G
Sbjct: 154 SVKLTDFGFCAQITPEQSKR----------------STMVGTPYWMAPEVVTRKAYGPKV 197
Query: 214 DLWSLFYMLVEFVNIQHP 231
D+WSL M +E + + P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 28 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 141
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 142 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 185
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 186 IWSLGCIFAEMVT 198
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 187
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 28 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 141
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 186
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LD GLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDGGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/190 (26%), Positives = 80/190 (42%), Gaps = 31/190 (16%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIG--CGRNDRFNYVVMQ-LQGKNLAEL--RRAQPRGA 108
KQ+L EV +L++L+ ++ R+ R + Y+VM+ +G +LA + + + R
Sbjct: 49 KQMLVSEVNLLRELK-HPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQY 107
Query: 109 FSLSTTLRLGIQILKAIESIH--SVG---FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
LR+ Q+ A++ H S G LHRD+KP+N + Q+ V + DFGLA
Sbjct: 108 LDEEFVLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQN----VKLGDFGLA 163
Query: 164 RQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLV 223
R + A F GT Y S D+WSL +L
Sbjct: 164 RILNHDEDF----------------AKEFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLY 207
Query: 224 EFVNIQHPLV 233
E + P
Sbjct: 208 ELCALMPPFT 217
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 33 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 90
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 91 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 146
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 147 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 190
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 191 IWSLGCIFAEMVT 203
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V +
Sbjct: 30 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI----NTEGAI 143
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 144 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 187
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 25/198 (12%)
Query: 36 DLVTKENVALK-VESARQPKQVLKM-EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ 93
D+ T + VA++ + +QPK+ L + E+ V+++ + V D V+ L
Sbjct: 41 DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G +L ++ ++ R + L+A+E +HS +HRDIK N +G
Sbjct: 101 GGSLTDVVTETCMDEGQIAAVCR---ECLQALEFLHSNQVIHRDIKSDNILLG----MDG 153
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
V + DFG Q T R + GT + + K G
Sbjct: 154 SVKLTDFGFCAQITPEQSKR----------------SXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 214 DLWSLFYMLVEFVNIQHP 231
D+WSL M +E + + P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 31 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI----NTEGAI 144
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 145 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 188
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 30 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 143
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 144 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 187
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 188 IWSLGCIFAEMVT 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 28 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 141
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 186
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 32 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 145
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 146 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 189
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 143 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 186
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 28 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 141
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 142 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 185
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 186 IWSLGCIFAEMVT 198
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 25/198 (12%)
Query: 36 DLVTKENVALK-VESARQPKQVLKM-EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ 93
D+ T + VA++ + +QPK+ L + E+ V+++ + V D V+ L
Sbjct: 42 DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 101
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G +L ++ ++ R + L+A+E +HS +HRDIK N +G
Sbjct: 102 GGSLTDVVTETCMDEGQIAAVCR---ECLQALEFLHSNQVIHRDIKSDNILLG----MDG 154
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
V + DFG Q T R + GT + + K G
Sbjct: 155 SVKLTDFGFCAQITPEQSKR----------------SXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 214 DLWSLFYMLVEFVNIQHP 231
D+WSL M +E + + P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 30 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 88 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 143
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 144 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 188
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 189 WSLGCIFAEMVT 200
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 31 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 144
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 145 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 188
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V +
Sbjct: 32 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLSM 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPENLLI----NTEGAI 145
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 146 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 189
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 143 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 186
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 187 IWSLGCIFAEMVT 199
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 32 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 145
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 146 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 189
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 31 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 88
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 89 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 144
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 145 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 188
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 189 IWSLGCIFAEMVT 201
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F ++ + NL +
Sbjct: 38 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 96
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 152
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 153 FGLSRLMT-------------GDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 220 YMLVEFVN 227
+L E
Sbjct: 198 VLLWEIAT 205
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRA 103
ALK Q + + E+ +L+ L EH+ ++ GC + V + ++ L LR
Sbjct: 45 ALKEGCGPQLRSGWQREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDY 103
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
PR L+ L QI + + +H+ ++HR + N L R V + DFGLA
Sbjct: 104 LPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV----LLDNDRLVKIGDFGLA 159
Query: 164 R 164
+
Sbjct: 160 K 160
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 70/165 (42%), Gaps = 28/165 (16%)
Query: 85 FNYVVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
F+Y+V L G L E A R +S + QIL+A+ H +G +HRD+KP N
Sbjct: 77 FHYLVFDLVTGGELFEDIVA--REYYSEADASHCIQQILEAVLHCHQMGVVHRDLKPENL 134
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
+ + V + DFGLA + + A GF GT Y S
Sbjct: 135 LLAS-KCKGAAVKLADFGLAIEVQGDQQ----------------AWFGFAGTPGYLSPEV 177
Query: 204 HKNKEMGRHDDLWS----LFYMLVEFVNI----QHPLVKAPRAAA 240
+ + G+ D+W+ L+ +LV + QH L + +A A
Sbjct: 178 LRKEAYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGA 222
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 46.2 bits (108), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 47/198 (23%), Positives = 80/198 (40%), Gaps = 25/198 (12%)
Query: 36 DLVTKENVALK-VESARQPKQVLKM-EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ 93
D+ T + VA++ + +QPK+ L + E+ V+++ + V D V+ L
Sbjct: 41 DVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSYLVGDELWVVMEYLA 100
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G +L ++ ++ R + L+A+E +HS +HRDIK N +G
Sbjct: 101 GGSLTDVVTETCMDEGQIAAVCR---ECLQALEFLHSNQVIHRDIKSDNILLG----MDG 153
Query: 154 RVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD 213
V + DFG Q T R + GT + + K G
Sbjct: 154 SVKLTDFGFCAQITPEQSKR----------------SEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 214 DLWSLFYMLVEFVNIQHP 231
D+WSL M +E + + P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 36 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 93
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 94 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 149
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 150 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----XKYYSTAV----------DI 194
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 195 WSLGCIFAEMVT 206
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 65/147 (44%), Gaps = 27/147 (18%)
Query: 83 DRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKP 140
+ FN Y+V L G +L + + Q + L QIL+ ++ IHS +HRD+KP
Sbjct: 97 EEFNDVYLVTHLMGADLNNIVKCQ---KLTDDHVQFLIYQILRGLKYIHSADIIHRDLKP 153
Query: 141 SNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS 200
SN ++ + +LD GLAR T E+ + T RAP +
Sbjct: 154 SNLAVNE----DCELKILDRGLARH--TDDEMTGYVATRW--YRAPEIMLNW-------- 197
Query: 201 INAHKNKEMGRHDDLWSLFYMLVEFVN 227
H N+ + D+WS+ ++ E +
Sbjct: 198 --MHYNQTV----DIWSVGCIMAELLT 218
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 77/192 (40%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----XKYYSTAV----------DI 187
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 55/121 (45%), Gaps = 5/121 (4%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRA 103
ALK Q + + E+ +L+ L EH+ ++ GC + V + ++ L LR
Sbjct: 44 ALKEGCGPQLRSGWQREIEILRTLY-HEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDY 102
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
PR L+ L QI + + +H+ ++HR + N L R V + DFGLA
Sbjct: 103 LPRHCVGLAQLLLFAQQICEGMAYLHAQHYIHRALAARNV----LLDNDRLVKIGDFGLA 158
Query: 164 R 164
+
Sbjct: 159 K 159
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/206 (23%), Positives = 84/206 (40%), Gaps = 38/206 (18%)
Query: 39 TKENVALKVESARQP----KQVLKMEVAVLKKLQGKEHVCRFIG-CGRNDRFNYVVMQLQ 93
TK+ + + V++ + P ++ + E +L LQ EH+ +F G CG D V ++
Sbjct: 42 TKDKMLVAVKALKDPTLAARKDFQREAELLTNLQ-HEHIVKFYGVCGDGDPLIMVFEYMK 100
Query: 94 GKNLAELRRA-----------QPR---GAFSLSTTLRLGIQILKAIESIHSVGFLHRDIK 139
+L + RA QPR G LS L + QI + + S F+HRD+
Sbjct: 101 HGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQIASGMVYLASQHFVHRDLA 160
Query: 140 PSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYA 199
N +G + V + DFG++R ++ R G P +R+
Sbjct: 161 TRNCLVG----ANLLVKIGDFGMSRDVYSTDYYR-----VGGHTMLP---------IRWM 202
Query: 200 SINAHKNKEMGRHDDLWSLFYMLVEF 225
+ ++ D+WS +L E
Sbjct: 203 PPESIMYRKFTTESDVWSFGVILWEI 228
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 59/135 (43%), Gaps = 15/135 (11%)
Query: 60 EVAVLKKLQGKEH--------VCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL 111
EVA+L++L+ EH VC R + V + L +A P G
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPA 111
Query: 112 STTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
T L Q L+ ++ +H+ +HRD+KP N L + V + DFGLAR Y S +
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENI----LVTSGGTVKLADFGLARIY--SYQ 165
Query: 172 LRNFNTTSSGEVRAP 186
+ F + RAP
Sbjct: 166 MALFPVVVTLWYRAP 180
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F ++ + NL +
Sbjct: 40 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 154
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 155 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 220 YMLVEFVN 227
+L E
Sbjct: 200 VLLWEIAT 207
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 76/188 (40%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F ++ + NL +
Sbjct: 40 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 98
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 154
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 155 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 220 YMLVEFVN 227
+L E
Sbjct: 200 VLLWEIAT 207
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 29 EVVALXKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 86
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 87 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 142
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 143 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 187
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 188 WSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 28 EVVALXKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 86 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 141
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 186
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNF 175
RL QIL+A+ IHS G +HRD+KP N I SR V + DFGLA+ S ++
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDE----SRNVKIGDFGLAKNVHRSLDILKL 175
Query: 176 NTT----SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
++ SS + + A + T H N+++ D++SL + E +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVAT-EVLDGTGHYNEKI----DMYSLGIIFFEMI 225
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 154 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 202
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 80/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 32 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEFLHQ 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 90 DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 145
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 146 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 189
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 181
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 181
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 13/115 (11%)
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNF 175
RL QIL+A+ IHS G +HRD+KP N I SR V + DFGLA+ S ++
Sbjct: 120 RLFRQILEALSYIHSQGIIHRDLKPMNIFIDE----SRNVKIGDFGLAKNVHRSLDILKL 175
Query: 176 NTT----SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
++ SS + + A + T H N+++ D++SL + E +
Sbjct: 176 DSQNLPGSSDNLTSAIGTAMYVAT-EVLDGTGHYNEKI----DMYSLGIIFFEMI 225
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 181
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 182
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/118 (27%), Positives = 55/118 (46%), Gaps = 20/118 (16%)
Query: 116 RLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
++ + I+KA+E +HS + +HRD+KPSN I L +V M DFG++ Y ++
Sbjct: 113 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINALG----QVKMCDFGIS-GYLVDDVAKD 167
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKN-KEMGRHDDLWSLFYMLVEFVNIQHP 231
+ AG + + IN N K D+WSL ++E ++ P
Sbjct: 168 ID-------------AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 181
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 135 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 183
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 181
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 133 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 181
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H R++ ++D+GLA Y E
Sbjct: 134 ELLKALDYCHSQGIMHRDVKPHNVMI---DHELRKLRLIDWGLAEFYHPGKE 182
>pdb|3H9F|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrimido-Diazepin Ligand
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 62/122 (50%), Gaps = 14/122 (11%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNL-AELRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L + L++ +
Sbjct: 64 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 123
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 124 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 173
Query: 164 RQ 165
Q
Sbjct: 174 NQ 175
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H +++ ++D+GLA Y + E
Sbjct: 140 ELLKALDYCHSKGIMHRDVKPHNVMI---DHQQKKLRLIDWGLAEFYHPAQE 188
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
++LKA++ HS G +HRD+KP N I H +++ ++D+GLA Y + E
Sbjct: 145 ELLKALDYCHSKGIMHRDVKPHNVMI---DHQQKKLRLIDWGLAEFYHPAQE 193
>pdb|2JII|A Chain A, Structure Of Vaccinia Related Kinase 3
pdb|2JII|B Chain B, Structure Of Vaccinia Related Kinase 3
Length = 352
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/144 (21%), Positives = 67/144 (46%), Gaps = 11/144 (7%)
Query: 83 DRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSN 142
D++ ++V+ G++L P+ S + L++ ++L A+E +H ++H ++ N
Sbjct: 130 DKYRFLVLPSLGRSLQSALDVSPKHVLSERSVLQVACRLLDALEFLHENEYVHGNVTAEN 189
Query: 143 FSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASIN 202
+ +V + +G A +Y S + + S R+P G + + S++
Sbjct: 190 IFVD--PEDQSQVTLAGYGFAFRYCPSGKHVAYVEGS----RSPH-----EGDLEFISMD 238
Query: 203 AHKNKEMGRHDDLWSLFYMLVEFV 226
HK R DL SL Y +++++
Sbjct: 239 LHKGCGPSRRSDLQSLGYCMLKWL 262
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 27/130 (20%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIG-RLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
QIL+A+ H +G +HRD+KP N + +L+ + V + DFGLA + +
Sbjct: 129 QILEAVLHCHQMGVVHRDLKPENLLLASKLKGAA--VKLADFGLAIEVEGEQQ------- 179
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEFVNI----QH 230
A GF GT Y S + G+ DLW+ L+ +LV + QH
Sbjct: 180 ---------AWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 230
Query: 231 PLVKAPRAAA 240
L + +A A
Sbjct: 231 RLYQQIKAGA 240
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/117 (25%), Positives = 54/117 (46%), Gaps = 23/117 (19%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+I+ A+E +H +G ++RDIK N L ++ V + DFGL++++ R ++
Sbjct: 167 EIVLALEHLHKLGIIYRDIKLENI----LLDSNGHVVLTDFGLSKEFVADETERAYD--- 219
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHD---DLWSLFYMLVEFVNIQHPLV 233
F GT+ Y + + + + G HD D WSL ++ E + P
Sbjct: 220 ------------FCGTIEYMAPDIVRGGDSG-HDKAVDWWSLGVLMYELLTGASPFT 263
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 21/114 (18%)
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
L L QI K ++ IHS ++RD+KPSN + +++V + DFGL
Sbjct: 125 LELFEQITKGVDYIHSKKLINRDLKPSNIFL----VDTKQVKIGDFGLV----------- 169
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
T+ + + R+ +GT+RY S +++ G+ DL++L +L E +++
Sbjct: 170 --TSLKNDGKRXRS----KGTLRYMSPEQISSQDYGKEVDLYALGLILAELLHV 217
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 60 EVAVLKKLQGKEH--------VCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL 111
EVA+L++L+ EH VC R + V + L +A P G
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPA 111
Query: 112 STTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
T L Q L+ ++ +H+ +HRD+KP N L + V + DFGLAR Y+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENI----LVTSGGTVKLADFGLARIYS 163
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 60 EVAVLKKLQGKEH--------VCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL 111
EVA+L++L+ EH VC R + V + L +A P G
Sbjct: 53 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPA 111
Query: 112 STTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
T L Q L+ ++ +H+ +HRD+KP N L + V + DFGLAR Y+
Sbjct: 112 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENI----LVTSGGTVKLADFGLARIYS 163
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 45.1 bits (105), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 52/116 (44%), Gaps = 13/116 (11%)
Query: 60 EVAVLKKLQGKEH--------VCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL 111
EVA+L++L+ EH VC R + V + L +A P G
Sbjct: 61 EVALLRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPG-LPA 119
Query: 112 STTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
T L Q L+ ++ +H+ +HRD+KP N L + V + DFGLAR Y+
Sbjct: 120 ETIKDLMRQFLRGLDFLHANCIVHRDLKPENI----LVTSGGTVKLADFGLARIYS 171
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/193 (23%), Positives = 81/193 (41%), Gaps = 23/193 (11%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 32 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEHVDQ 89
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L + A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 90 DLKKFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 145
Query: 156 YMLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ DFGLAR + +R + + + RAP G +Y S D
Sbjct: 146 KLADFGLARAFGVP--VRTYXHEVVTLWYRAPEILLG----CKYYSTAV----------D 189
Query: 215 LWSLFYMLVEFVN 227
+WSL + E V
Sbjct: 190 IWSLGCIFAEMVT 202
>pdb|2ZMD|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain T686a
Mutant In Complex With Sp600125 Inhibitor
Length = 390
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 61/122 (50%), Gaps = 14/122 (11%)
Query: 48 ESARQPKQVLKMEVAVLKKLQG-KEHVCRFIGCGRNDRFNYVVMQLQGKNLAE-LRRAQP 105
E+ Q + E+A L KLQ + + R D++ Y+VM+ +L L++ +
Sbjct: 92 EADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYEITDQYIYMVMECGNIDLNSWLKKKKS 151
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI--GRLQHTSRRVYMLDFGLA 163
+ + + +L+A+ +IH G +H D+KP+NF I G L+ ++DFG+A
Sbjct: 152 IDPWERKSYWK---NMLEAVHTIHQHGIVHSDLKPANFLIVDGMLK-------LIDFGIA 201
Query: 164 RQ 165
Q
Sbjct: 202 NQ 203
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 13 VKERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVLKKL--QG 69
V R++V++ +D ++VALK V + ++ + E+ +L+ L Q
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 70 KEHVCRFIGCGRNDRF-NYVVM--QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
K++ I N F N++ M +L NL EL + FSL + IL+ ++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAP 186
++H +H D+KP N + Q + ++DFG + R + S RAP
Sbjct: 215 ALHKNRIIHCDLKPENILLK--QQGRSGIKVIDFG----SSCYEHQRVYTXIQSRFYRAP 268
Query: 187 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKA 235
G R G D+WSL +L E + +PL+
Sbjct: 269 EVILGAR---------------YGMPIDMWSLGCILAELLT-GYPLLPG 301
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 85 FNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+ + G L ++ + G + + + +A+ H G +HRD+KP+N
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANI 147
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
I + V ++DFG+AR S N+ + A GT +Y S
Sbjct: 148 MIS----ATNAVKVMDFGIARAIADSG-----NSVTQ--------TAAVIGTAQYLSPEQ 190
Query: 204 HKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ + D++SL +L E + + P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 45.1 bits (105), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 85 FNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+ + G L ++ + G + + + +A+ H G +HRD+KP+N
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANI 147
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
I + V ++DFG+AR S N+ + A GT +Y S
Sbjct: 148 MIS----ATNAVKVMDFGIARAIADSG-----NSVTQ--------TAAVIGTAQYLSPEQ 190
Query: 204 HKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ + D++SL +L E + + P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 85 FNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+ + G L ++ + G + + + +A+ H G +HRD+KP+N
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANI 147
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
I + V ++DFG+AR S N+ + A GT +Y S
Sbjct: 148 MIS----ATNAVKVMDFGIARAIADSG-----NSVTQ--------TAAVIGTAQYLSPEQ 190
Query: 204 HKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ + D++SL +L E + + P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 38 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 152
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 153 FGLSRLMT-------------GDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 220 YMLVEFVN 227
+L E
Sbjct: 198 VLLWEIAT 205
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 45.1 bits (105), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 85 FNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+ + G L ++ + G + + + +A+ H G +HRD+KP+N
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANI 147
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
I + V ++DFG+AR S N+ + A GT +Y S
Sbjct: 148 MIS----ATNAVKVMDFGIARAIADSG-----NSVTQ--------TAAVIGTAQYLSPEQ 190
Query: 204 HKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ + D++SL +L E + + P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+I+ AI+S+H +G++HRDIKP N + R H + + DFG + +R+
Sbjct: 170 EIVMAIDSVHRLGYVHRDIKPDNILLDRCGH----IRLADFGSCLKLRADGTVRSLVAVG 225
Query: 180 SGEVRAPR 187
+ + +P
Sbjct: 226 TPDYLSPE 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 44.7 bits (104), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 63/148 (42%), Gaps = 20/148 (13%)
Query: 85 FNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+ + G L ++ + G + + + +A+ H G +HRD+KP+N
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANI 164
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
I + V ++DFG+AR S N+ + A GT +Y S
Sbjct: 165 MIS----ATNAVKVMDFGIARAIADSG-----NSVTQ--------TAAVIGTAQYLSPEQ 207
Query: 204 HKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ + D++SL +L E + + P
Sbjct: 208 ARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/229 (24%), Positives = 94/229 (41%), Gaps = 28/229 (12%)
Query: 13 VKERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVLKKL--QG 69
V R++V++ +D ++VALK V + ++ + E+ +L+ L Q
Sbjct: 95 VAYRYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 70 KEHVCRFIGCGRNDRF-NYVVM--QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
K++ I N F N++ M +L NL EL + FSL + IL+ ++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAP 186
++H +H D+KP N + Q + ++DFG + R + S RAP
Sbjct: 215 ALHKNRIIHCDLKPENILLK--QQGRSGIKVIDFG----SSCYEHQRVYTXIQSRFYRAP 268
Query: 187 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKA 235
G R G D+WSL +L E + +PL+
Sbjct: 269 EVILGAR---------------YGMPIDMWSLGCILAELLT-GYPLLPG 301
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 40 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 154
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 155 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 220 YMLVEFVN 227
+L E
Sbjct: 200 VLLWEIAT 207
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 45 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 104 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 159
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 160 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 220 YMLVEFVN 227
+L E
Sbjct: 205 VLLWEIAT 212
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 40 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 99 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 154
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 155 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 220 YMLVEFVN 227
+L E
Sbjct: 200 VLLWEIAT 207
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 76/185 (41%), Gaps = 22/185 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F ++ + NL +
Sbjct: 45 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 103
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 159
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 160 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 220 YMLVE 224
+L E
Sbjct: 205 VLLWE 209
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 76/186 (40%), Gaps = 22/186 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F ++ + NL +
Sbjct: 41 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLD 99
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 155
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 156 FGLSRLMT-------------GDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 200
Query: 220 YMLVEF 225
+L E
Sbjct: 201 VLLWEI 206
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 44.7 bits (104), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 55/216 (25%), Positives = 86/216 (39%), Gaps = 45/216 (20%)
Query: 51 RQPKQVLKMEVAVLKKLQGKEH--------VCRFI---------GCGRNDRFNYVVMQL- 92
+ P Q ++ KKL ++H +CR + + F+Y+V L
Sbjct: 53 KTPTQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLV 112
Query: 93 QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTS 152
G L E A R +S + QIL+++ IH +HRD+KP N + +
Sbjct: 113 TGGELFEDIVA--REYYSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLAS-KCKG 169
Query: 153 RRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRH 212
V + DFGLA + GE +A GF GT Y S + G+
Sbjct: 170 AAVKLADFGLAIEV-------------QGE---QQAWFGFAGTPGYLSPEVLRKDPYGKP 213
Query: 213 DDLWS----LFYMLVEFVNI----QHPLVKAPRAAA 240
D+W+ L+ +LV + QH L + +A A
Sbjct: 214 VDIWACGVILYILLVGYPPFWDEDQHKLYQQIKAGA 249
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 36 DLVTKENVALKVESARQPK--QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM-QL 92
DL + +A+K R + Q L E+A+ K L+ K ++ +++G + F + M Q+
Sbjct: 29 DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK-NIVQYLGSFSENGFIKIFMEQV 87
Query: 93 QGKNLAELRRAQPRGAFSLSTTLRLGI-QILKAIESIHSVGFLHRDIKPSNFSIGRLQHT 151
G +L+ L R++ T+ QIL+ ++ +H +HRDIK N I
Sbjct: 88 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--- 144
Query: 152 SRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS--INAHKNKEM 209
S + + DFG TS L N + F GT++Y + I +
Sbjct: 145 SGVLKISDFG------TSKRLAGINPCTE----------TFTGTLQYMAPEIIDKGPRGY 188
Query: 210 GRHDDLWSLFYMLVEFVNIQHPLVK--APRAA 239
G+ D+WSL ++E + P + P+AA
Sbjct: 189 GKAADIWSLGCTIIEMATGKPPFYELGEPQAA 220
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 44.3 bits (103), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/196 (24%), Positives = 82/196 (41%), Gaps = 32/196 (16%)
Query: 37 LVTKENVALKVESARQ-----PKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ 91
++T E VA+K+ P+ +K E+ LK L+ +H+C+ ++V++
Sbjct: 32 ILTGEMVAIKIMDKNTLGSDLPR--IKTEIEALKNLR-HQHICQLYHVLETANKIFMVLE 88
Query: 92 -LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
G L + +Q R S T + QI+ A+ +HS G+ HRD+KP N L
Sbjct: 89 YCPGGELFDYIISQDR--LSEEETRVVFRQIVSAVAYVHSQGYAHRDLKPENL----LFD 142
Query: 151 TSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
++ ++DFGL + + + S AP G +G
Sbjct: 143 EYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQG--------------KSYLG 188
Query: 211 RHDDLWS---LFYMLV 223
D+WS L Y+L+
Sbjct: 189 SEADVWSMGILLYVLM 204
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/192 (22%), Positives = 76/192 (39%), Gaps = 21/192 (10%)
Query: 36 DLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
++V + + L E+ P ++ E+++LK+L ++ + + + Y+V + +
Sbjct: 28 EVVALKKIRLDTETEGVPSTAIR-EISLLKELN-HPNIVKLLDVIHTENKLYLVFEHVHQ 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+L A L Q+L+ + HS LHRD+KP N I +T +
Sbjct: 86 DLKTFMDASALTGIPLPLIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLI----NTEGAI 141
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + + RAP G +Y S D+
Sbjct: 142 KLADFGLARAFGVPVRTYTHEVVTLW-YRAPEILLG----CKYYSTAV----------DI 186
Query: 216 WSLFYMLVEFVN 227
WSL + E V
Sbjct: 187 WSLGCIFAEMVT 198
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 94/212 (44%), Gaps = 28/212 (13%)
Query: 36 DLVTKENVALKVESARQPK--QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM-QL 92
DL + +A+K R + Q L E+A+ K L+ K ++ +++G + F + M Q+
Sbjct: 43 DLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHK-NIVQYLGSFSENGFIKIFMEQV 101
Query: 93 QGKNLAELRRAQPRGAFSLSTTLRLGI-QILKAIESIHSVGFLHRDIKPSNFSIGRLQHT 151
G +L+ L R++ T+ QIL+ ++ +H +HRDIK N I
Sbjct: 102 PGGSLSALLRSKWGPLKDNEQTIGFYTKQILEGLKYLHDNQIVHRDIKGDNVLINTY--- 158
Query: 152 SRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS--INAHKNKEM 209
S + + DFG TS L N + F GT++Y + I +
Sbjct: 159 SGVLKISDFG------TSKRLAGINPCTE----------TFTGTLQYMAPEIIDKGPRGY 202
Query: 210 GRHDDLWSLFYMLVEFVNIQHPLVK--APRAA 239
G+ D+WSL ++E + P + P+AA
Sbjct: 203 GKAADIWSLGCTIIEMATGKPPFYELGEPQAA 234
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 44.3 bits (103), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 49/120 (40%), Gaps = 20/120 (16%)
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
T + +Q+ A+E +HS +HRDIKP+N I + V + D GL R +++ +
Sbjct: 137 TVWKYFVQLCSALEHMHSRRVMHRDIKPANVFIT----ATGVVKLGDLGLGRFFSSKTT- 191
Query: 173 RNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
AA GT Y S D+WSL +L E +Q P
Sbjct: 192 ---------------AAHSLVGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 95/229 (41%), Gaps = 28/229 (12%)
Query: 13 VKERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVLKKL--QG 69
V R++V++ +D ++VALK V + ++ + E+ +L+ L Q
Sbjct: 95 VAYRYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQD 154
Query: 70 KEHVCRFIGCGRNDRF-NYVVM--QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
K++ I N F N++ M +L NL EL + FSL + IL+ ++
Sbjct: 155 KDNTMNVIHMLENFTFRNHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCLD 214
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAP 186
++H +H D+KP N + Q + ++DFG + R + S RAP
Sbjct: 215 ALHKNRIIHCDLKPENILLK--QQGRSGIKVIDFG----SSCYEHQRVYXXIQSRFYRAP 268
Query: 187 RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKA 235
G R G D+WSL +L E + +PL+
Sbjct: 269 EVILGAR---------------YGMPIDMWSLGCILAELLT-GYPLLPG 301
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 38 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 96
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R S L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 97 YLRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 152
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 153 FGLSRLMT-------------GDTFTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 197
Query: 220 YMLVEFVN 227
+L E
Sbjct: 198 VLLWEIAT 205
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/132 (27%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 35 HDLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQG 94
H++V + V L + P L+ E+ +LK+L+ K ++ R +D+ +V +
Sbjct: 27 HEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCD 84
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
++L + + G Q+LK + HS LHRD+KP N I R +
Sbjct: 85 QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR----NGE 139
Query: 155 VYMLDFGLARQY 166
+ + DFGLAR +
Sbjct: 140 LKLADFGLARAF 151
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/135 (26%), Positives = 64/135 (47%), Gaps = 7/135 (5%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLST 113
K+ +K E++V+ +L + + + V+ + G L + + L T
Sbjct: 130 KEEVKNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDT 189
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
L + QI + I +H + LH D+KP N I + ++++ ++DFGLAR+Y +L+
Sbjct: 190 ILFMK-QICEGIRHMHQMYILHLDLKPEN--ILCVNRDAKQIKIIDFGLARRYKPREKLK 246
Query: 174 -NFNTTSSGEVRAPR 187
NF T E AP
Sbjct: 247 VNFGTP---EFLAPE 258
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 44/98 (44%), Gaps = 12/98 (12%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI A+ +H+ G HRDIKP NF + S + ++DFGL+++ F +
Sbjct: 176 QIFSALHYLHNQGICHRDIKPENFLFS--TNKSFEIKLVDFGLSKE---------FYKLN 224
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS 217
+GE AG V +N N+ G D WS
Sbjct: 225 NGEYYGMTTKAGTPYFVAPEVLNT-TNESYGPKCDAWS 261
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 36 DLVTKENVALKVESARQPKQ-----VLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D +T + A+KV S RQ KQ L EV +LK+L ++ + + + Y+V
Sbjct: 71 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVG 129
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ G L + ++ R FS R+ Q+L I +H +HRD+KP N + +
Sbjct: 130 EVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL-ESK 186
Query: 150 HTSRRVYMLDFGLARQYTTSSELRN 174
+ ++DFGL+ + S ++++
Sbjct: 187 SKDANIRIIDFGLSTHFEASKKMKD 211
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 71/145 (48%), Gaps = 10/145 (6%)
Query: 36 DLVTKENVALKVESARQPKQ-----VLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D +T + A+KV S RQ KQ L EV +LK+L ++ + + + Y+V
Sbjct: 70 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVG 128
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ G L + ++ R FS R+ Q+L I +H +HRD+KP N + +
Sbjct: 129 EVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL-ESK 185
Query: 150 HTSRRVYMLDFGLARQYTTSSELRN 174
+ ++DFGL+ + S ++++
Sbjct: 186 SKDANIRIIDFGLSTHFEASKKMKD 210
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 75/175 (42%), Gaps = 18/175 (10%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL-RR 102
+ E ++ ++ EV +L+K+ G ++ + + F ++V L K EL
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK--GELFDY 114
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
+ S T ++ +L+ I ++H + +HRD+KP N L + + DFG
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI----LLDDDMNIKLTDFGF 170
Query: 163 ARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS 217
+ Q +LR+ T S AP + S+N + + G+ D+WS
Sbjct: 171 SCQLDPGEKLRSVCGTPS--YLAPE--------IIECSMNDN-HPGYGKEVDMWS 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 35/202 (17%)
Query: 39 TKENVALK-VESARQPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFN-----YVVM 90
T E VA+K +E +P L+ E+ +LK + E++ R D F Y++
Sbjct: 35 TGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQ 93
Query: 91 QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
+L +L + Q S Q L+A++ +H +HRD+KPSN I +
Sbjct: 94 ELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----N 146
Query: 151 TSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM- 209
++ + + DFGLAR S+ N+ +G+ G V + + ++ E+
Sbjct: 147 SNCDLKVCDFGLARIIDESAA---DNSEPTGQQ---------SGMVEFVATRWYRAPEVM 194
Query: 210 ------GRHDDLWSLFYMLVEF 225
R D+WS +L E
Sbjct: 195 LTSAKYSRAMDVWSCGCILAEL 216
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 42 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 156
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T + A AG + +++ + + + D+W+
Sbjct: 157 FGLSRLMTGDTY---------------TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 201
Query: 220 YMLVEF 225
+L E
Sbjct: 202 VLLWEI 207
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 92/228 (40%), Gaps = 25/228 (10%)
Query: 36 DLVTKENVALKVESARQPKQV---LKMEVAVLKKLQGKEHVCRFIGCGRN-DRFNYVVMQ 91
+L+T + A+K+ +QP + + EV +L + QG +V I DRF V +
Sbjct: 34 NLITSQEYAVKI-IEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92
Query: 92 LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHT 151
++G ++ L R F+ + + A++ +H+ G HRD+KP N
Sbjct: 93 MRGGSI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQV 150
Query: 152 SRRVYMLDFGLARQYTTSSELRNFNT------TSSGEVRAPRAAAGFRGTVRYASINAHK 205
S V + DFGL + + +T S E AP F ASI
Sbjct: 151 S-PVKICDFGLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS---EEASI---- 202
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGF-RGTVRYASIN 252
+ DLWSL +L ++ P V + G+ RG A N
Sbjct: 203 ---YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 36 DLVTKENVALKVESARQPKQ-----VLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D +T + A+KV S RQ KQ L EV +LK+L ++ + + + Y+V
Sbjct: 53 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVG 111
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ G L + R FS R+ Q+L I +H +HRD+KP N + +
Sbjct: 112 EVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL-ESK 168
Query: 150 HTSRRVYMLDFGLARQYTTSSELRN 174
+ ++DFGL+ + S ++++
Sbjct: 169 SKDANIRIIDFGLSTHFEASKKMKD 193
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 73/175 (41%), Gaps = 18/175 (10%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL-RR 102
+ E ++ ++ EV +L+K+ G ++ + + F ++V L K EL
Sbjct: 44 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK--GELFDY 101
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
+ S T ++ +L+ I ++H + +HRD+KP N L + + DFG
Sbjct: 102 LTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI----LLDDDMNIKLTDFGF 157
Query: 163 ARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS 217
+ Q +LR T S AP S+N + + G+ D+WS
Sbjct: 158 SCQLDPGEKLREVCGTPS--YLAPEIIE--------CSMNDN-HPGYGKEVDMWS 201
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 41 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 99
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 100 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 155
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T + A AG + +++ + + + D+W+
Sbjct: 156 FGLSRLMTGDTY---------------TAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFG 200
Query: 220 YMLVEF 225
+L E
Sbjct: 201 VLLWEI 206
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNF 175
RL QIL+A+ IHS G +HR++KP N I SR V + DFGLA+ S ++
Sbjct: 120 RLFRQILEALSYIHSQGIIHRNLKPXNIFIDE----SRNVKIGDFGLAKNVHRSLDILKL 175
Query: 176 NT 177
++
Sbjct: 176 DS 177
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 36 DLVTKENVALKVESARQPKQ-----VLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D +T + A+KV S RQ KQ L EV +LK+L ++ + + + Y+V
Sbjct: 47 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIMKLYEFFEDKGYFYLVG 105
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ G L + R FS R+ Q+L I +H +HRD+KP N + +
Sbjct: 106 EVYTGGELFD--EIISRKRFSEVDAARIIRQVLSGITYMHKNKIVHRDLKPENLLL-ESK 162
Query: 150 HTSRRVYMLDFGLARQYTTSSELRN 174
+ ++DFGL+ + S ++++
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKMKD 187
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 35/148 (23%), Positives = 62/148 (41%), Gaps = 20/148 (13%)
Query: 85 FNYVVMQ-LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Y+VM+ + G L ++ + G + + + +A+ H G +HRD+KP+N
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTE--GPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANI 147
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
I + V ++DFG+AR S N+ A GT +Y S
Sbjct: 148 LIS----ATNAVKVVDFGIARAIADSG-----NSVXQ--------TAAVIGTAQYLSPEQ 190
Query: 204 HKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ + D++SL +L E + + P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 45 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 159
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 160 FGLSRLMT-------------GDTXTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 220 YMLVEF 225
+L E
Sbjct: 205 VLLWEI 210
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/206 (24%), Positives = 82/206 (39%), Gaps = 35/206 (16%)
Query: 39 TKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--G 94
T A+K+ +S R P + E+ +L + ++ + ++ YVV +L G
Sbjct: 46 TNXEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELXKGG 101
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
+ L ++ R + FS + I K +E +H+ G +HRD+KPSN
Sbjct: 102 ELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRY-ASINAHKNKEMGRHD 213
+ + DFG A+Q RA G T Y A+ A + E +D
Sbjct: 159 IRICDFGFAKQL--------------------RAENGLLXTPCYTANFVAPEVLERQGYD 198
Query: 214 ---DLWSLFYMLVEFVNIQHPLVKAP 236
D+WSL +L + P P
Sbjct: 199 AACDIWSLGVLLYTXLTGYTPFANGP 224
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 12/117 (10%)
Query: 112 STTLRLGIQILKAIESIHSVGFLHRDIKPSN--FSIGRLQHTSRRVYMLDFGLARQYTTS 169
S L + +QI +A+E +HS G +HRD+KPSN F++ + V + DFGL
Sbjct: 118 SVCLHIFLQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV------VKVGDFGLVTAMDQD 171
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
E + T R G GT Y S D++SL +L E +
Sbjct: 172 EEEQTVLTPMPAYAR----HTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 62/132 (46%), Gaps = 9/132 (6%)
Query: 53 PKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAE-LRRAQPRG-AF 109
P + ++ E+ VLK L ++ + + Y+VM+ +G L E + AQ RG A
Sbjct: 63 PMEQIEAEIEVLKSLD-HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKAL 121
Query: 110 SLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR--VYMLDFGLARQYT 167
S L Q++ A+ HS +H+D+KP N Q TS + ++DFGLA +
Sbjct: 122 SEGYVAELMKQMMNALAYFHSQHVVHKDLKPENI---LFQDTSPHSPIKIIDFGLAELFK 178
Query: 168 TSSELRNFNTTS 179
+ N T+
Sbjct: 179 SDEHSTNAAGTA 190
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/175 (22%), Positives = 74/175 (42%), Gaps = 18/175 (10%)
Query: 44 ALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL-RR 102
+ E ++ ++ EV +L+K+ G ++ + + F ++V L K EL
Sbjct: 57 SFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKK--GELFDY 114
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
+ S T ++ +L+ I ++H + +HRD+KP N L + + DFG
Sbjct: 115 LTEKVTLSEKETRKIMRALLEVICALHKLNIVHRDLKPENI----LLDDDMNIKLTDFGF 170
Query: 163 ARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS 217
+ Q +LR T S AP + S+N + + G+ D+WS
Sbjct: 171 SCQLDPGEKLREVCGTPS--YLAPE--------IIECSMNDN-HPGYGKEVDMWS 214
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 81/202 (40%), Gaps = 27/202 (13%)
Query: 39 TKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--G 94
T A+K+ +S R P + E+ +L + ++ + ++ YVV +L G
Sbjct: 46 TNMEFAVKIIDKSKRDPTE----EIEILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGG 101
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
+ L ++ R + FS + I K +E +H+ G +HRD+KPSN
Sbjct: 102 ELLDKILRQK---FFSEREASAVLFTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPES 158
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ + DFG A+Q LR N G + P A F + + + D
Sbjct: 159 IRICDFGFAKQ------LRAEN----GLLMTPCYTANF------VAPEVLERQGYDAACD 202
Query: 215 LWSLFYMLVEFVNIQHPLVKAP 236
+WSL +L + P P
Sbjct: 203 IWSLGVLLYTMLTGYTPFANGP 224
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 85/202 (42%), Gaps = 35/202 (17%)
Query: 39 TKENVALK-VESARQPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFN-----YVVM 90
T E VA+K +E +P L+ E+ +LK + E++ R D F Y++
Sbjct: 35 TGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQ 93
Query: 91 QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
+L +L + Q S Q L+A++ +H +HRD+KPSN I +
Sbjct: 94 ELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----N 146
Query: 151 TSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM- 209
++ + + DFGLAR S+ N+ +G+ G Y + ++ E+
Sbjct: 147 SNCDLKVCDFGLARIIDESAA---DNSEPTGQQ---------SGMTEYVATRWYRAPEVM 194
Query: 210 ------GRHDDLWSLFYMLVEF 225
R D+WS +L E
Sbjct: 195 LTSAKYSRAMDVWSCGCILAEL 216
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 71/140 (50%), Gaps = 18/140 (12%)
Query: 35 HDLVTKENVALK-----VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGC---GRNDRFN 86
+D + K VA+K E K++L+ E+A+L +L +HV + + ++F+
Sbjct: 73 YDKLEKRVVAIKKILRVFEDLIDCKRILR-EIAILNRL-NHDHVVKVLDIVIPKDVEKFD 130
Query: 87 --YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
YVV+++ + +L R P L L +L ++ +HS G LHRD+KP+N
Sbjct: 131 ELYVVLEIADSDFKKLFRT-PVYLTELHIKTLL-YNLLVGVKYVHSAGILHRDLKPANCL 188
Query: 145 IGRLQHTSRRVYMLDFGLAR 164
+ Q S +V DFGLAR
Sbjct: 189 VN--QDCSVKV--CDFGLAR 204
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 45 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 159
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 160 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 220 YMLVE 224
+L E
Sbjct: 205 VLLWE 209
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 40 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 154
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 155 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 220 YMLVE 224
+L E
Sbjct: 200 VLLWE 204
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 43.5 bits (101), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 40 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 98
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 99 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 154
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 155 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 199
Query: 220 YMLVE 224
+L E
Sbjct: 200 VLLWE 204
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 42 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 156
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 157 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 201
Query: 220 YMLVEF 225
+L E
Sbjct: 202 VLLWEI 207
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 42 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 100
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 101 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 156
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 157 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 201
Query: 220 YMLVEF 225
+L E
Sbjct: 202 VLLWEI 207
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 53 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 111
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 112 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 167
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 168 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 212
Query: 220 YMLVE 224
+L E
Sbjct: 213 VLLWE 217
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 45 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 103
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 104 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 159
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 160 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 204
Query: 220 YMLVEFVN 227
+L E
Sbjct: 205 VLLWEIAT 212
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 60/130 (46%), Gaps = 27/130 (20%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIG-RLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
QIL+A+ H +G +HR++KP N + +L+ + V + DFGLA +
Sbjct: 118 QILEAVLHCHQMGVVHRNLKPENLLLASKLKGAA--VKLADFGLAIEV------------ 163
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEFVNI----QH 230
GE +A GF GT Y S + G+ DLW+ L+ +LV + QH
Sbjct: 164 -EGE---QQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACGVILYILLVGYPPFWDEDQH 219
Query: 231 PLVKAPRAAA 240
L + +A A
Sbjct: 220 RLYQQIKAGA 229
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 75/188 (39%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 44 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLD 102
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 103 YLRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHLVKVAD 158
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + + D+W+
Sbjct: 159 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFG 203
Query: 220 YMLVEFVN 227
+L E
Sbjct: 204 VLLWEIAT 211
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 31/166 (18%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V +L +LA++ Q R S IL + +H G +HRD+ P N +
Sbjct: 110 YLVTELMRTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + + DF LAR+ T + ++ T RAP F+G +
Sbjct: 169 ----DNNDITICDFNLAREDTADANKTHYVTHRW--YRAPELVMQFKGFTKLV------- 215
Query: 207 KEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYASIN 252
D+WS ++ E N + A FRG+ Y +N
Sbjct: 216 -------DMWSAGCVMAEMFNRK----------ALFRGSTFYNQLN 244
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/169 (24%), Positives = 69/169 (40%), Gaps = 21/169 (12%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLA--ELRRAQPRGAFSLST 113
LK E ++ L+ H+ + +D Y+V + + G +L ++RA +S +
Sbjct: 73 LKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL+A+ H +HRD+KP N + + S V + DFG+A Q S
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPENVLLAS-KENSAPVKLGDFGVAIQLGESG--- 187
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYML 222
A G GT + + K + G+ D+W +L
Sbjct: 188 -------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 37/194 (19%)
Query: 65 KKLQGKEHVCRFI---------GCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTT 114
+KL+ + +CR + + F+Y+V L G L E A R +S +
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADA 105
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
QIL+++ H G +HRD+KP N + + V + DFGLA + +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLAS-KSKGAAVKLADFGLAIEVQGDQQ--- 161
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEFVNI-- 228
A GF GT Y S + G+ D+W+ L+ +LV +
Sbjct: 162 -------------AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 229 --QHPLVKAPRAAA 240
QH L + +A A
Sbjct: 209 EDQHRLYQQIKAGA 222
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/194 (25%), Positives = 78/194 (40%), Gaps = 37/194 (19%)
Query: 65 KKLQGKEHVCRFI---------GCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTT 114
+KL+ + +CR + + F+Y+V L G L E A R +S +
Sbjct: 48 QKLEREARICRLLKHPNIVRLHDSISEEGFHYLVFDLVTGGELFEDIVA--REYYSEADA 105
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
QIL+++ H G +HRD+KP N + + V + DFGLA + +
Sbjct: 106 SHCIQQILESVNHCHLNGIVHRDLKPENLLLAS-KSKGAAVKLADFGLAIEVQGDQQ--- 161
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS----LFYMLVEFVNI-- 228
A GF GT Y S + G+ D+W+ L+ +LV +
Sbjct: 162 -------------AWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPPFWD 208
Query: 229 --QHPLVKAPRAAA 240
QH L + +A A
Sbjct: 209 EDQHRLYQQIKAGA 222
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 48/107 (44%), Gaps = 2/107 (1%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
EV +L++ +V R+ ++ +F Y+ ++L L E + L L
Sbjct: 67 EVQLLRESDEHPNVIRYFCTEKDRQFQYIAIELCAATLQEYVEQKDFAHLGLEPITLLQ- 125
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQ-HTSRRVYMLDFGLARQ 165
Q + +HS+ +HRD+KP N I H + + DFGL ++
Sbjct: 126 QTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKK 172
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/166 (24%), Positives = 65/166 (39%), Gaps = 31/166 (18%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
Y+V +L +LA++ Q R S IL + +H G +HRD+ P N +
Sbjct: 110 YLVTELMRTDLAQVIHDQ-RIVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLA 168
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ + + DF LAR+ T + ++ T RAP F+G +
Sbjct: 169 ----DNNDITICDFNLAREDTADANKTHYVTHRW--YRAPELVMQFKGFTKLV------- 215
Query: 207 KEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFRGTVRYASIN 252
D+WS ++ E N + A FRG+ Y +N
Sbjct: 216 -------DMWSAGCVMAEMFNRK----------ALFRGSTFYNQLN 244
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/220 (22%), Positives = 95/220 (43%), Gaps = 27/220 (12%)
Query: 35 HDLVTKENVALK-----VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRND---RFN 86
+D T++NVA+K E K++L+ E+ +L +L+ +++ R D +F+
Sbjct: 46 YDKNTEKNVAIKKVNRMFEDLIDCKRILR-EITILNRLKS-DYIIRLYDLIIPDDLLKFD 103
Query: 87 --YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIES-IHSVGFLHRDIKPSNF 143
Y+V+++ +L +L + F ++ + L E+ IH G +HRD+KP+N
Sbjct: 104 ELYIVLEIADSDLKKLFKT---PIFLTEEHIKTILYNLLLGENFIHESGIIHRDLKPANC 160
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
+ Q S +V DFGLAR + + N E P + +
Sbjct: 161 LLN--QDCSVKV--CDFGLARTINSEKDTNIVNDLEENEEPGPHNKNLKKQLTSHVVTRW 216
Query: 204 HKNKEM-------GRHDDLWSLFYMLVEFVNIQHPLVKAP 236
++ E+ + D+WS + E +N+ + P
Sbjct: 217 YRAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDP 256
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 43.1 bits (100), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 63/134 (47%), Gaps = 16/134 (11%)
Query: 39 TKENVALK-VESARQPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFN-----YVVM 90
T E VA+K +E +P L+ E+ +LK + E++ R D F Y++
Sbjct: 35 TGEIVAIKKIEPFDKPLFALRTLREIKILKHFK-HENIITIFNIQRPDSFENFNEVYIIQ 93
Query: 91 QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
+L +L + Q S Q L+A++ +H +HRD+KPSN I +
Sbjct: 94 ELMQTDLHRVISTQ---MLSDDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLI----N 146
Query: 151 TSRRVYMLDFGLAR 164
++ + + DFGLAR
Sbjct: 147 SNCDLKVCDFGLAR 160
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 39 TKENVA---LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
T E VA LK ES LK E+ +L+ L E++ ++ G D N + + ++
Sbjct: 37 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFL 95
Query: 96 NLAELRRAQPRGA--FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
L+ P+ +L L+ +QI K ++ + S ++HRD+ N L +
Sbjct: 96 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV----LVESEH 151
Query: 154 RVYMLDFGLARQYTTSSE 171
+V + DFGL + T E
Sbjct: 152 QVKIGDFGLTKAIETDKE 169
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 10/138 (7%)
Query: 39 TKENVA---LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
T E VA LK ES LK E+ +L+ L E++ ++ G D N + + ++
Sbjct: 49 TGEQVAVKSLKPESGGNHIADLKKEIEILRNLY-HENIVKYKGICTEDGGNGIKLIMEFL 107
Query: 96 NLAELRRAQPRGA--FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
L+ P+ +L L+ +QI K ++ + S ++HRD+ N L +
Sbjct: 108 PSGSLKEYLPKNKNKINLKQQLKYAVQICKGMDYLGSRQYVHRDLAARNV----LVESEH 163
Query: 154 RVYMLDFGLARQYTTSSE 171
+V + DFGL + T E
Sbjct: 164 QVKIGDFGLTKAIETDKE 181
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTTL 115
K E+ ++K L ++ R ++ Y+VM+L G L E R + F S
Sbjct: 53 FKQEIEIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAA 109
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
R+ +L A+ H + HRD+KP NF + + ++DFGLA ++ +R
Sbjct: 110 RIMKDVLSAVAYCHKLNVAHRDLKPENF-LFLTDSPDSPLKLIDFGLAARFKPGKMMRT 167
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 42.4 bits (98), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 43 VALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL 100
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 248 VAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 306
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R R S L + QI A+E + F+HR++ N +G + V + DF
Sbjct: 307 LRECNRQEVSAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE----NHLVKVADF 362
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
GL+R T G+ A A F +++ + + + D+W+
Sbjct: 363 GLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGV 407
Query: 221 MLVEF 225
+L E
Sbjct: 408 LLWEI 412
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 42.4 bits (98), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 54/119 (45%), Gaps = 5/119 (4%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTTL 115
K E+ ++K L ++ R ++ Y+VM+L G L E R + F S
Sbjct: 70 FKQEIEIMKSLD-HPNIIRLYETFEDNTDIYLVMELCTGGELFE--RVVHKRVFRESDAA 126
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
R+ +L A+ H + HRD+KP NF + + ++DFGLA ++ +R
Sbjct: 127 RIMKDVLSAVAYCHKLNVAHRDLKPENF-LFLTDSPDSPLKLIDFGLAARFKPGKMMRT 184
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/135 (23%), Positives = 59/135 (43%), Gaps = 7/135 (5%)
Query: 45 LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL-RRA 103
L E + ++ + E +L+++ G H+ I + F ++V L K EL
Sbjct: 134 LSPEQLEEVREATRRETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRK--GELFDYL 191
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLA 163
+ A S T + +L+A+ +H+ +HRD+KP N L + ++ + DFG +
Sbjct: 192 TEKVALSEKETRSIMRSLLEAVSFLHANNIVHRDLKPENI----LLDDNMQIRLSDFGFS 247
Query: 164 RQYTTSSELRNFNTT 178
+LR T
Sbjct: 248 CHLEPGEKLRELCGT 262
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 42/77 (54%), Gaps = 11/77 (14%)
Query: 102 RAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR----V 155
R Q RG AF+ + I +AI+ +HS+ HRD+KP N L +TS+R +
Sbjct: 149 RIQDRGDQAFTEREASEIXKSIGEAIQYLHSINIAHRDVKPEN-----LLYTSKRPNAIL 203
Query: 156 YMLDFGLARQYTTSSEL 172
+ DFG A++ T+ + L
Sbjct: 204 KLTDFGFAKETTSHNSL 220
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 90 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 145
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 146 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 174
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 35/132 (26%), Positives = 62/132 (46%), Gaps = 7/132 (5%)
Query: 35 HDLVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQG 94
H++V + V L + P L+ E+ +LK+L+ K ++ R +D+ +V +
Sbjct: 27 HEIVALKRVRLDDDDEGVPSSALR-EICLLKELKHK-NIVRLHDVLHSDKKLTLVFEFCD 84
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
++L + + G Q+LK + HS LHRD+KP N I R +
Sbjct: 85 QDLKKYFDSC-NGDLDPEIVKSFLFQLLKGLGFCHSRNVLHRDLKPQNLLINR----NGE 139
Query: 155 VYMLDFGLARQY 166
+ + +FGLAR +
Sbjct: 140 LKLANFGLARAF 151
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 91 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 146
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 147 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 175
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 90 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 145
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 146 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 174
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 92 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 147
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 148 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 176
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 92 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 147
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 148 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 176
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 106 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 161
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 162 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 190
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 142 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 197
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 198 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 226
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 136 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 191
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 192 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 220
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 5/72 (6%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+L+++ IHS+G HRDIKP N L S + ++DFG A+ N +
Sbjct: 149 QLLRSLAYIHSIGICHRDIKPQNL---LLDPPSGVLKLIDFGSAKILIAGEP--NVSXIC 203
Query: 180 SGEVRAPRAAAG 191
S RAP G
Sbjct: 204 SRYYRAPELIFG 215
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 42.0 bits (97), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 98 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 153
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 154 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 182
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 97 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 152
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 153 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 181
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 16/116 (13%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSS 180
I K +E +HS G +HRD+KPSN + + DFG A+Q LR N
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ------LRAEN---- 179
Query: 181 GEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP 236
G + P A F + K + D+WSL +L + P P
Sbjct: 180 GLLMTPCYTANF------VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 44/188 (23%), Positives = 73/188 (38%), Gaps = 22/188 (11%)
Query: 42 NVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAE 99
VA+K E + ++ LK E AV+K+++ V C F V + NL +
Sbjct: 59 TVAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLD 117
Query: 100 LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLD 159
R R + L + QI A+E + F+HRD+ N +G + V + D
Sbjct: 118 YLRECNREEVTAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGE----NHVVKVAD 173
Query: 160 FGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
FGL+R T G+ A A F +++ + + D+W+
Sbjct: 174 FGLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNTFSIKSDVWAFG 218
Query: 220 YMLVEFVN 227
+L E
Sbjct: 219 VLLWEIAT 226
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 49/92 (53%), Gaps = 14/92 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 96 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 151
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSEL 172
L +TS+R + + DFG A++ T+ + L
Sbjct: 152 ---LLYTSKRPNAILKLTDFGFAKETTSHNSL 180
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 82/205 (40%), Gaps = 27/205 (13%)
Query: 39 TKENVALKVESAR--QPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGK 95
T + VA+K R Q +++L EV +++ V + D +VVM+ L+G
Sbjct: 69 TGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSYLVGDEL-WVVMEFLEGG 127
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L ++ ++T + +L+A+ +H+ G +HRDIK + L + R+
Sbjct: 128 ALTDIVTHTRMNEEQIATVC---LSVLRALSYLHNQGVIHRDIKSDSI----LLTSDGRI 180
Query: 156 YMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFG Q + R GT + + G D+
Sbjct: 181 KLSDFGFCAQVSKEVPKRKX----------------LVGTPYWMAPEVISRLPYGTEVDI 224
Query: 216 WSLFYMLVEFVNIQHPLVKAPRAAA 240
WSL M++E ++ + P P A
Sbjct: 225 WSLGIMVIEMIDGEPPYFNEPPLQA 249
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 87 YVVMQLQGKNLAEL-RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
YVV+ L +L ++ +QP +L Q+L+ ++ +HS +HRD+KPSN
Sbjct: 135 YVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL-- 189
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA 188
L + + + + DFG+AR TS + T R RA
Sbjct: 190 --LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 41.6 bits (96), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 46/116 (39%), Gaps = 16/116 (13%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSS 180
I K +E +HS G +HRD+KPSN + + DFG A+Q LR N
Sbjct: 130 IGKTVEYLHSQGVVHRDLKPSNILYVDESGNPECLRICDFGFAKQ------LRAEN---- 179
Query: 181 GEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP 236
G + P A F + K + D+WSL +L + P P
Sbjct: 180 GLLMTPCYTANF------VAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPFANGP 229
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 87 YVVMQLQGKNLAEL-RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
YVV+ L +L ++ +QP +L Q+L+ ++ +HS +HRD+KPSN
Sbjct: 136 YVVLDLMESDLHQIIHSSQP---LTLEHVRYFLYQLLRGLKYMHSAQVIHRDLKPSNL-- 190
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA 188
L + + + + DFG+AR TS + T R RA
Sbjct: 191 --LVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/116 (30%), Positives = 51/116 (43%), Gaps = 12/116 (10%)
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSN--FSIGRLQHTSRRVYMLDFGLARQYTTSS 170
L + IQI +A+E +HS G +HRD+KPSN F++ + V + DFGL
Sbjct: 165 VCLHIFIQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDV------VKVGDFGLVTAMDQDE 218
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
E + T + A G GT Y S D++SL +L E +
Sbjct: 219 EEQTVLTP----MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 36 DLVTKENVALKVESAR---QPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D+ TKE A KV +P Q KM E+A+ K L HV F G +D F YVV+
Sbjct: 47 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNP-HVVGFHGFFEDDDFVYVVL 105
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ + ++L EL + R A + Q ++ ++ +H+ +HRD+K N +
Sbjct: 106 EICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---- 159
Query: 150 HTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM 209
+ V + DFGLA + E + GT Y + K
Sbjct: 160 NDDMDVKIGDFGLATKIEFDGERKK----------------DLCGTPNYIAPEVLCKKGH 203
Query: 210 GRHDDLWSLFYMLVEFVNIQHPL 232
D+WSL +L + + P
Sbjct: 204 SFEVDIWSLGCILYTLLVGKPPF 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/193 (25%), Positives = 82/193 (42%), Gaps = 25/193 (12%)
Query: 39 TKENVALK--VESARQP--KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQG 94
T + VA+K +ES P K++ E+ +LK+L+ V R R + V
Sbjct: 27 TGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVFRRKRRLHLVFEYCDH 86
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
L EL R Q RG + Q L+A+ H +HRD+KP N I + H+
Sbjct: 87 TVLHELDRYQ-RGVPE-HLVKSITWQTLQAVNFCHKHNCIHRDVKPENILITK--HSV-- 140
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDD 214
+ + DFG AR T S+ + + ++ R+P G + + G D
Sbjct: 141 IKLCDFGFARLLTGPSDYYD-DEVATRWYRSPELLVG--------------DTQYGPPVD 185
Query: 215 LWSLFYMLVEFVN 227
+W++ + E ++
Sbjct: 186 VWAIGCVFAELLS 198
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 36 DLVTKENVALKVESAR---QPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D+ TKE A KV +P Q KM E+A+ K L HV F G +D F YVV+
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-PHVVGFHGFFEDDDFVYVVL 121
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ + ++L EL + R A + Q ++ ++ +H+ +HRD+K N +
Sbjct: 122 EICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---- 175
Query: 150 HTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM 209
+ V + DFGLA + E + GT Y + K
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKK----------------DLCGTPNYIAPEVLCKKGH 219
Query: 210 GRHDDLWSLFYMLVEFVNIQHPL 232
D+WSL +L + + P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 41.2 bits (95), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 54/251 (21%), Positives = 94/251 (37%), Gaps = 55/251 (21%)
Query: 83 DRFNYVVMQLQGKNL-AELRRA----QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRD 137
D+ +V+ + G L L+R +PR F +I A+ +HS+ ++RD
Sbjct: 112 DKLYFVLDYINGGELFYHLQRERCFLEPRARF-------YAAEIASALGYLHSLNIVYRD 164
Query: 138 IKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVR 197
+KP N + H + + DFGL ++ + + +TTS+ F GT
Sbjct: 165 LKPENILLDSQGH----IVLTDFGLCKE-----NIEHNSTTST-----------FCGTPE 204
Query: 198 YASINAHKNKEMGRHDDLWSLFYMLVEFVN-----------------IQHPLVKAPRAAA 240
Y + + R D W L +L E + + PL P
Sbjct: 205 YLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNKPLQLKPNITN 264
Query: 241 GFRGTVRYASINAHKNKEMGRHDDLWSL----FYMLVEFVNFFRIGTGHAFSTSLAMPRD 296
R + + + K +G DD + F+ L+ + + F+ +++ P D
Sbjct: 265 SARHLLE-GLLQKDRTKRLGAKDDFMEIKSHVFFSLINWDDLINKKITPPFNPNVSGPND 323
Query: 297 ELAGFRSEATE 307
L F E TE
Sbjct: 324 -LRHFDPEFTE 333
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 70/170 (41%), Gaps = 30/170 (17%)
Query: 66 KLQGKE------HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
KL GK H + +N N V+M+ L ++ ++ R S+ L + I
Sbjct: 88 KLGGKNNGVNNHHKSVIVNPSQNKYLN-VIMEYVPDTLHKVLKSFIRSGRSIPMNL-ISI 145
Query: 120 ---QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
Q+ +A+ IHS+G HRDIKP N + +T + + DFG A++ S +
Sbjct: 146 YIYQLFRAVGFIHSLGICHRDIKPQNLLVNSKDNTLK---LCDFGSAKKLIPSEP--SVA 200
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T SI DLWS+ + E +
Sbjct: 201 XICSRFYRAPELMLG--ATEYTPSI------------DLWSIGCVFGELI 236
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 69/145 (47%), Gaps = 10/145 (6%)
Query: 36 DLVTKENVALKVESARQPKQ-----VLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D +T + A+KV S RQ KQ L EV +LK+L ++ + + + Y+V
Sbjct: 47 DKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLD-HPNIXKLYEFFEDKGYFYLVG 105
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ G L + ++ R FS R+ Q+L I H +HRD+KP N + +
Sbjct: 106 EVYTGGELFDEIISRKR--FSEVDAARIIRQVLSGITYXHKNKIVHRDLKPENLLL-ESK 162
Query: 150 HTSRRVYMLDFGLARQYTTSSELRN 174
+ ++DFGL+ + S + ++
Sbjct: 163 SKDANIRIIDFGLSTHFEASKKXKD 187
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 41.2 bits (95), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 36 DLVTKENVALKVESAR---QPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D+ TKE A KV +P Q KM E+A+ K L HV F G +D F YVV+
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-PHVVGFHGFFEDDDFVYVVL 121
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ + ++L EL + R A + Q ++ ++ +H+ +HRD+K N +
Sbjct: 122 EICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---- 175
Query: 150 HTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM 209
+ V + DFGLA + E + GT Y + K
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKK----------------TLCGTPNYIAPEVLCKKGH 219
Query: 210 GRHDDLWSLFYMLVEFVNIQHPL 232
D+WSL +L + + P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 40.8 bits (94), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 84/203 (41%), Gaps = 29/203 (14%)
Query: 36 DLVTKENVALKVESAR---QPKQVLKM--EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D+ TKE A KV +P Q KM E+A+ K L HV F G +D F YVV+
Sbjct: 63 DMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDN-PHVVGFHGFFEDDDFVYVVL 121
Query: 91 QL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
++ + ++L EL + R A + Q ++ ++ +H+ +HRD+K N +
Sbjct: 122 EICRRRSLLELHKR--RKAVTEPEARYFMRQTIQGVQYLHNNRVIHRDLKLGNLFL---- 175
Query: 150 HTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM 209
+ V + DFGLA + E + GT Y + K
Sbjct: 176 NDDMDVKIGDFGLATKIEFDGERKK----------------XLCGTPNYIAPEVLCKKGH 219
Query: 210 GRHDDLWSLFYMLVEFVNIQHPL 232
D+WSL +L + + P
Sbjct: 220 SFEVDIWSLGCILYTLLVGKPPF 242
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 52/118 (44%), Gaps = 20/118 (16%)
Query: 116 RLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
++ + I+KA+E +HS + +HRD+KPSN I L +V DFG++ Y ++
Sbjct: 140 KIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL----GQVKXCDFGIS-GYLVDDVAKD 194
Query: 175 FNTTSSGEVRAPRAAAGFRGTVRYASINAHKN-KEMGRHDDLWSLFYMLVEFVNIQHP 231
+ AG + IN N K D+WSL +E ++ P
Sbjct: 195 ID-------------AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 57/228 (25%), Positives = 91/228 (39%), Gaps = 25/228 (10%)
Query: 36 DLVTKENVALKVESARQPKQV---LKMEVAVLKKLQGKEHVCRFIGCGRN-DRFNYVVMQ 91
+L+T + A+K+ +QP + + EV +L + QG +V I DRF V +
Sbjct: 34 NLITSQEYAVKI-IEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFFEEEDRFYLVFEK 92
Query: 92 LQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHT 151
++G ++ L R F+ + + A++ +H+ G HRD+KP N
Sbjct: 93 MRGGSI--LSHIHKRRHFNELEASVVVQDVASALDFLHNKGIAHRDLKPENILCEHPNQV 150
Query: 152 SRRVYMLDFGLARQYTTSSELRNFNT------TSSGEVRAPRAAAGFRGTVRYASINAHK 205
S V + DF L + + +T S E AP F ASI
Sbjct: 151 S-PVKICDFDLGSGIKLNGDCSPISTPELLTPCGSAEYMAPEVVEAFS---EEASI---- 202
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGF-RGTVRYASIN 252
+ DLWSL +L ++ P V + G+ RG A N
Sbjct: 203 ---YDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACPACQN 247
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 32/196 (16%)
Query: 39 TKENVALKVESARQ----------PKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNY 87
T + VA+K+ S R+ P ++ E+ +LKKL H C I + Y
Sbjct: 40 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYY 96
Query: 88 VVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V++L +G L + R +T Q+L A++ +H G +HRD+KP N +
Sbjct: 97 IVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 154
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
Q + + DFG ++ +S +R T + AP GT Y
Sbjct: 155 S-QEEDCLIKITDFGHSKILGETSLMRTLCGTPT--YLAPEVLVSV-GTAGY-------- 202
Query: 207 KEMGRHDDLWSLFYML 222
R D WSL +L
Sbjct: 203 ---NRAVDCWSLGVIL 215
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/186 (23%), Positives = 75/186 (40%), Gaps = 22/186 (11%)
Query: 43 VALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL 100
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 287 VAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 345
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R R + L + QI A+E + F+HR++ N +G + V + DF
Sbjct: 346 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE----NHLVKVADF 401
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
GL+R T G+ A A F +++ + + + D+W+
Sbjct: 402 GLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGV 446
Query: 221 MLVEFV 226
+L E
Sbjct: 447 LLWEIA 452
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/185 (23%), Positives = 75/185 (40%), Gaps = 22/185 (11%)
Query: 43 VALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAEL 100
VA+K E + ++ LK E AV+K+++ V C R F + + NL +
Sbjct: 245 VAVKTLKEDTMEVEEFLK-EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDY 303
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R R + L + QI A+E + F+HR++ N +G + V + DF
Sbjct: 304 LRECNRQEVNAVVLLYMATQISSAMEYLEKKNFIHRNLAARNCLVGE----NHLVKVADF 359
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
GL+R T G+ A A F +++ + + + D+W+
Sbjct: 360 GLSRLMT-------------GDTYTAHAGAKF--PIKWTAPESLAYNKFSIKSDVWAFGV 404
Query: 221 MLVEF 225
+L E
Sbjct: 405 LLWEI 409
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 180
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 181 --EFVAPE-------IVNY--------EPLGLEADMWSI 202
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 37 LVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNYVVMQL-QG 94
+++K A+ P ++ E+ +LKKL H C I + Y+V++L +G
Sbjct: 167 IISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYYIVLELMEG 223
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
L + R +T Q+L A++ +H G +HRD+KP N + Q
Sbjct: 224 GELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS-QEEDCL 280
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSS---GEVRAPRAAAGFRGTVRYASI 201
+ + DFG ++ +S +R T + EV AG+ V S+
Sbjct: 281 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 330
>pdb|3KGA|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Potent 3-Aminopyrazole Atp Site Inhibitor
pdb|3M2W|A Chain A, Crystal Structure Of Mapkak Kinase 2 (Mk2) Complexed With
A Spiroazetidine-Tetracyclic Atp Site Inhibitor
pdb|3M42|A Chain A, Crystal Structure Of Mapkap Kinase 2 (Mk2) Complexed With
A Tetracyclic Atp Site Inhibitor
Length = 299
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 52/103 (50%), Gaps = 14/103 (13%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
+VM+ L G L R Q RG AF+ + I +AI+ +HS+ HRD+KP N
Sbjct: 92 IVMECLDGGEL--FSRIQDRGDQAFTEREASEIMKSIGEAIQYLHSINIAHRDVKPEN-- 147
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSSELRNFNTTSSGEV 183
L +TS+R + + DFG A++ T ++ + S G +
Sbjct: 148 ---LLYTSKRPNAILKLTDFGFAKETTGEKYDKSCDMWSLGVI 187
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 121 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 180
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 181 --EFVAPE-------IVNY--------EPLGLEADMWSI 202
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 40.8 bits (94), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 32/196 (16%)
Query: 39 TKENVALKVESARQ----------PKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNY 87
T + VA+K+ S R+ P ++ E+ +LKKL H C I + Y
Sbjct: 34 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYY 90
Query: 88 VVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V++L +G L + R +T Q+L A++ +H G +HRD+KP N +
Sbjct: 91 IVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
Q + + DFG ++ +S +R T + AP GT Y
Sbjct: 149 S-QEEDCLIKITDFGHSKILGETSLMRTLCGTPT--YLAPEVLVSV-GTAGY-------- 196
Query: 207 KEMGRHDDLWSLFYML 222
R D WSL +L
Sbjct: 197 ---NRAVDCWSLGVIL 209
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ +L+A+ +H+ G +HRDIK + L H RV + DFG Q + R
Sbjct: 177 LAVLQALSVLHAQGVIHRDIKSDSIL---LTHDG-RVKLSDFGFCAQVSKEVPRRKX--- 229
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP-- 236
GT + + G D+WSL M++E V+ + P P
Sbjct: 230 -------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 276
Query: 237 RAAAGFRGTVRYASINAHK 255
+A R + N HK
Sbjct: 277 KAMKMIRDNLPPRLKNLHK 295
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 32/196 (16%)
Query: 39 TKENVALKVESARQ----------PKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNY 87
T + VA+K+ S R+ P ++ E+ +LKKL H C I + Y
Sbjct: 33 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYY 89
Query: 88 VVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V++L +G L + R +T Q+L A++ +H G +HRD+KP N +
Sbjct: 90 IVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 147
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
Q + + DFG ++ +S +R T + AP GT Y
Sbjct: 148 S-QEEDCLIKITDFGHSKILGETSLMRTLCGTPT--YLAPEVLVSV-GTAGY-------- 195
Query: 207 KEMGRHDDLWSLFYML 222
R D WSL +L
Sbjct: 196 ---NRAVDCWSLGVIL 208
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/170 (24%), Positives = 73/170 (42%), Gaps = 11/170 (6%)
Query: 37 LVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNYVVMQL-QG 94
+++K A+ P ++ E+ +LKKL H C I + Y+V++L +G
Sbjct: 181 IISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYYIVLELMEG 237
Query: 95 KNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
L + R +T Q+L A++ +H G +HRD+KP N + Q
Sbjct: 238 GELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLSS-QEEDCL 294
Query: 155 VYMLDFGLARQYTTSSELRNFNTTSS---GEVRAPRAAAGFRGTVRYASI 201
+ + DFG ++ +S +R T + EV AG+ V S+
Sbjct: 295 IKITDFGHSKILGETSLMRTLCGTPTYLAPEVLVSVGTAGYNRAVDCWSL 344
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 32/196 (16%)
Query: 39 TKENVALKVESARQ----------PKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNY 87
T + VA+K+ S R+ P ++ E+ +LKKL H C I + Y
Sbjct: 34 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYY 90
Query: 88 VVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V++L +G L + R +T Q+L A++ +H G +HRD+KP N +
Sbjct: 91 IVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
Q + + DFG ++ +S +R T + AP GT Y
Sbjct: 149 S-QEEDCLIKITDFGHSKILGETSLMRTLCGTPT--YLAPEVLVSV-GTAGY-------- 196
Query: 207 KEMGRHDDLWSLFYML 222
R D WSL +L
Sbjct: 197 ---NRAVDCWSLGVIL 209
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 51/196 (26%), Positives = 81/196 (41%), Gaps = 32/196 (16%)
Query: 39 TKENVALKVESARQ----------PKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNY 87
T + VA+K+ S R+ P ++ E+ +LKKL H C I + Y
Sbjct: 34 TCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLN---HPCIIKIKNFFDAEDYY 90
Query: 88 VVMQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V++L +G L + R +T Q+L A++ +H G +HRD+KP N +
Sbjct: 91 IVLELMEGGELFDKVVGNKR--LKEATCKLYFYQMLLAVQYLHENGIIHRDLKPENVLLS 148
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
Q + + DFG ++ +S +R T + AP GT Y
Sbjct: 149 S-QEEDCLIKITDFGHSKILGETSLMRTLCGTPT--YLAPEVLVSV-GTAGY-------- 196
Query: 207 KEMGRHDDLWSLFYML 222
R D WSL +L
Sbjct: 197 ---NRAVDCWSLGVIL 209
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ +L+A+ +H+ G +HRDIK + L H RV + DFG Q + R
Sbjct: 134 LAVLQALSVLHAQGVIHRDIKSDSI---LLTHDG-RVKLSDFGFCAQVSKEVPRRKX--- 186
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP-- 236
GT + + G D+WSL M++E V+ + P P
Sbjct: 187 -------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 233
Query: 237 RAAAGFRGTVRYASINAHK 255
+A R + N HK
Sbjct: 234 KAMKMIRDNLPPRLKNLHK 252
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/125 (25%), Positives = 58/125 (46%), Gaps = 9/125 (7%)
Query: 99 ELRRAQPRGAF-SLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYM 157
E+ R + +G F + L L + I + +E+IH+ G+ HRD+KP+N +G + +
Sbjct: 120 EIERLKDKGNFLTEDQILWLLLGICRGLEAIHAKGYAHRDLKPTNILLG----DEGQPVL 175
Query: 158 LDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS 217
+D G Q E + + + A R +R + S+ +H + D+WS
Sbjct: 176 MDLGSMNQACIHVE-GSRQALTLQDWAAQRCTISYRAPELF-SVQSH--CVIDERTDVWS 231
Query: 218 LFYML 222
L +L
Sbjct: 232 LGCVL 236
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ +L+A+ +H+ G +HRDIK + L H RV + DFG Q + R
Sbjct: 254 LAVLQALSVLHAQGVIHRDIKSDSI---LLTHDG-RVKLSDFGFCAQVSKEVPRRKX--- 306
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP-- 236
GT + + G D+WSL M++E V+ + P P
Sbjct: 307 -------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 353
Query: 237 RAAAGFRGTVRYASINAHK 255
+A R + N HK
Sbjct: 354 KAMKMIRDNLPPRLKNLHK 372
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ +L+A+ +H+ G +HRDIK + L H RV + DFG Q + R
Sbjct: 132 LAVLQALSVLHAQGVIHRDIKSDSI---LLTHDG-RVKLSDFGFCAQVSKEVPRRKX--- 184
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP-- 236
GT + + G D+WSL M++E V+ + P P
Sbjct: 185 -------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 231
Query: 237 RAAAGFRGTVRYASINAHK 255
+A R + N HK
Sbjct: 232 KAMKMIRDNLPPRLKNLHK 250
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ +L+A+ +H+ G +HRDIK + L H RV + DFG Q + R
Sbjct: 123 LAVLQALSVLHAQGVIHRDIKSDSI---LLTHDG-RVKLSDFGFCAQVSKEVPRRKX--- 175
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP-- 236
GT + + G D+WSL M++E V+ + P P
Sbjct: 176 -------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 222
Query: 237 RAAAGFRGTVRYASINAHK 255
+A R + N HK
Sbjct: 223 KAMKMIRDNLPPRLKNLHK 241
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 40.4 bits (93), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 54/139 (38%), Gaps = 22/139 (15%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTT 178
+ +L+A+ +H+ G +HRDIK + L H RV + DFG Q + R
Sbjct: 127 LAVLQALSVLHAQGVIHRDIKSDSI---LLTHDG-RVKLSDFGFCAQVSKEVPRRKX--- 179
Query: 179 SSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAP-- 236
GT + + G D+WSL M++E V+ + P P
Sbjct: 180 -------------LVGTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPPYFNEPPL 226
Query: 237 RAAAGFRGTVRYASINAHK 255
+A R + N HK
Sbjct: 227 KAMKMIRDNLPPRLKNLHK 245
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/210 (19%), Positives = 87/210 (41%), Gaps = 33/210 (15%)
Query: 43 VALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFN-YVVMQLQGK-NLAEL 100
VA+K Q E +V+ +L+ ++ + +G ++ Y+V + K +L +
Sbjct: 47 VAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 105
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R++ R L+ + + +A+E + F+HRD+ N L + DF
Sbjct: 106 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV----LVSEDNVAKVSDF 161
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS--- 217
GL ++ ++ T +G++ V++ + A + K+ D+WS
Sbjct: 162 GLTKEASS--------TQDTGKL-----------PVKWTAPEALREKKFSTKSDVWSFGI 202
Query: 218 LFYMLVEFVNIQHPLVK----APRAAAGFR 243
L + + F + +P + PR G++
Sbjct: 203 LLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 232
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 124 AIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEV 183
A++ +HS+G ++RD+KP N + H + + DFGL+++ +
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGH----IKLTDFGLSKE----------------SI 177
Query: 184 RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
+ A F GTV Y + + + D WS ++ E + P
Sbjct: 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N T
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTP 181
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 182 --EFVAPE-------IVNY--------EPLGLEADMWSI 203
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 124 AIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEV 183
A++ +HS+G ++RD+KP N + H + + DFGL+++ +
Sbjct: 139 ALDHLHSLGIIYRDLKPENILLDEEGH----IKLTDFGLSKE----------------SI 178
Query: 184 RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
+ A F GTV Y + + + D WS ++ E + P
Sbjct: 179 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 227
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + R++ R L+ + + +A+E + F+HRD+ N
Sbjct: 76 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV-- 133
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L + DFGL ++ ++ T +G++ V++ + A +
Sbjct: 134 --LVSEDNVAKVSDFGLTKEASS--------TQDTGKL-----------PVKWTAPEALR 172
Query: 206 NKEMGRHDDLWS---LFYMLVEFVNIQHPLVK----APRAAAGFR 243
K+ D+WS L + + F + +P + PR G++
Sbjct: 173 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 217
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/126 (26%), Positives = 58/126 (46%), Gaps = 10/126 (7%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ P Q + EVAVL+K + ++ F+G D V +G +L
Sbjct: 60 DVAVKILKVVDPTPEQFQAFRNEVAVLRKTR-HVNILLFMGYMTKDNLAIVTQWCEGSSL 118
Query: 98 AELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYM 157
+ Q F + + + Q + ++ +H+ +HRD+K +N + H V +
Sbjct: 119 YKHLHVQ-ETKFQMFQLIDIARQTAQGMDYLHAKNIIHRDMKSNNIFL----HEGLTVKI 173
Query: 158 LDFGLA 163
DFGLA
Sbjct: 174 GDFGLA 179
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/109 (22%), Positives = 46/109 (42%), Gaps = 20/109 (18%)
Query: 124 AIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEV 183
A++ +HS+G ++RD+KP N + H + + DFGL+++ +
Sbjct: 138 ALDHLHSLGIIYRDLKPENILLDEEGH----IKLTDFGLSKE----------------SI 177
Query: 184 RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
+ A F GTV Y + + + D WS ++ E + P
Sbjct: 178 DHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPF 226
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/89 (26%), Positives = 46/89 (51%), Gaps = 3/89 (3%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFN--YVVMQLQGKNLAELRRAQPRGAFSLSTT 114
+K E+ +L++L+ K +V + + N+ Y+VM+ + E+ + P F +
Sbjct: 53 VKKEIQLLRRLRHK-NVIQLVDVLYNEEKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQA 111
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNF 143
Q++ +E +HS G +H+DIKP N
Sbjct: 112 HGYFCQLIDGLEYLHSQGIVHKDIKPGNL 140
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFGLA++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/165 (20%), Positives = 68/165 (41%), Gaps = 31/165 (18%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + R++ R L+ + + +A+E + F+HRD+ N
Sbjct: 263 YIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV-- 320
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L + DFGL ++ ++ T +G++ V++ + A +
Sbjct: 321 --LVSEDNVAKVSDFGLTKEASS--------TQDTGKL-----------PVKWTAPEALR 359
Query: 206 NKEMGRHDDLWS---LFYMLVEFVNIQHPLVK----APRAAAGFR 243
K+ D+WS L + + F + +P + PR G++
Sbjct: 360 EKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 404
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 106
Query: 98 AELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYM 157
A F + + + Q + ++ +H+ +HRD+K +N + H V +
Sbjct: 107 YHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDNTVKI 161
Query: 158 LDFGLARQYTTSSELRNFNTTS 179
DFGLA + + S F S
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLS 183
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS H D+KP N + + R+ ++DFG+A + +E +N T
Sbjct: 123 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 55/119 (46%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFGLA++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IKVTDFGLAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 120 QILKAIESIHSVGFLHRDIKPSN--FSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
Q+ K + +H ++H D+KP N F+ R S + ++DFGL ++ T
Sbjct: 263 QVCKGLCHMHENNYVHLDLKPENIMFTTKR----SNELKLIDFGLTAHLDPKQSVK--VT 316
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS---LFYMLV 223
T + E AP A G K +G + D+WS L Y+L+
Sbjct: 317 TGTAEFAAPEVAEG---------------KPVGYYTDMWSVGVLSYILL 350
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS H D+KP N + + R+ ++DFG+A + +E +N T
Sbjct: 137 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 196
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 197 --EFVAPE-------IVNY--------EPLGLEADMWSI 218
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 67 LQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
++ K+ + I N+ F+Y+V R S R QI+ A+E
Sbjct: 73 IKSKDEIIMVIEYAGNELFDYIVQ---------------RDKMSEQEARRFFQQIISAVE 117
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVR-- 184
H +HRD+KP N + +H + ++ DFGL+ T NF TS G
Sbjct: 118 YCHRHKIVHRDLKPENLLLD--EHLNVKI--ADFGLSNIMTDG----NFLKTSCGSPNYA 169
Query: 185 APRAAAG 191
AP +G
Sbjct: 170 APEVISG 176
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 48/109 (44%), Gaps = 26/109 (23%)
Query: 120 QILKAIESIHSVGFLHRDIKPSN--FSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
Q+ K + +H ++H D+KP N F+ R S + ++DFGL ++ T
Sbjct: 157 QVCKGLCHMHENNYVHLDLKPENIMFTTKR----SNELKLIDFGLTAHLDPKQSVK--VT 210
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS---LFYMLV 223
T + E AP A G K +G + D+WS L Y+L+
Sbjct: 211 TGTAEFAAPEVAEG---------------KPVGYYTDMWSVGVLSYILL 244
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 67 LQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
++ K+ + I N+ F+Y+V R S R QI+ A+E
Sbjct: 83 IKSKDEIIMVIEYAGNELFDYIVQ---------------RDKMSEQEARRFFQQIISAVE 127
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVR-- 184
H +HRD+KP N + +H + ++ DFGL+ T NF TS G
Sbjct: 128 YCHRHKIVHRDLKPENLLLD--EHLNVKI--ADFGLSNIMTDG----NFLKTSCGSPNYA 179
Query: 185 APRAAAG 191
AP +G
Sbjct: 180 APEVISG 186
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 196
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 197 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 229
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 138 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 192
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 193 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 225
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS H D+KP N + + R+ ++DFG+A + +E +N T
Sbjct: 116 QILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTP 175
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 176 --EFVAPE-------IVNY--------EPLGLEADMWSI 197
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 52/127 (40%), Gaps = 25/127 (19%)
Query: 67 LQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
++ K+ + I N+ F+Y+V R S R QI+ A+E
Sbjct: 77 IKSKDEIIMVIEYAGNELFDYIVQ---------------RDKMSEQEARRFFQQIISAVE 121
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVR-- 184
H +HRD+KP N + +H + ++ DFGL+ T NF TS G
Sbjct: 122 YCHRHKIVHRDLKPENLLLD--EHLNVKI--ADFGLSNIMTDG----NFLKTSCGSPNYA 173
Query: 185 APRAAAG 191
AP +G
Sbjct: 174 APEVISG 180
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 49/127 (38%), Gaps = 25/127 (19%)
Query: 67 LQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIE 126
++ K+ + I N+ F+Y+V R S R QI+ A+E
Sbjct: 82 IKSKDEIIMVIEYAGNELFDYIVQ---------------RDKMSEQEARRFFQQIISAVE 126
Query: 127 SIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVR-- 184
H +HRD+KP N L V + DFGL+ T NF TS G
Sbjct: 127 YCHRHKIVHRDLKPENL----LLDEHLNVKIADFGLSNIMTDG----NFLKTSCGSPNYA 178
Query: 185 APRAAAG 191
AP +G
Sbjct: 179 APEVISG 185
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 149 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 203
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 204 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 236
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 39.7 bits (91), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 218
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 219 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 251
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 142 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 196
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 197 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 229
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 134 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 188
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 189 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 37 LVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
+V + + L E P ++ E+++LK+L ++ I ++R +V + K+
Sbjct: 47 IVALKRIRLDAEDEGIPSTAIR-EISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD 104
Query: 97 LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L ++ G + L Q+L+ + H LHRD+KP N I ++ +
Sbjct: 105 LKKVLDENKTGLQDSQIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLI----NSDGALK 159
Query: 157 MLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + +R++ + + RAP G +K+ D+
Sbjct: 160 LADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMG--------------SKKYSTSVDI 203
Query: 216 WSLFYMLVEFVN 227
WS+ + E +
Sbjct: 204 WSIGCIFAEMIT 215
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/142 (24%), Positives = 62/142 (43%), Gaps = 10/142 (7%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 48 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTAPQLAIVTQWCEGSSL 106
Query: 98 AELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYM 157
A F + + + Q + ++ +H+ +HRD+K +N + H V +
Sbjct: 107 YHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDNTVKI 161
Query: 158 LDFGLARQYTTSSELRNFNTTS 179
DFGLA + + S F S
Sbjct: 162 GDFGLATEKSRWSGSHQFEQLS 183
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/192 (21%), Positives = 81/192 (42%), Gaps = 24/192 (12%)
Query: 37 LVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
+V + + L E P ++ E+++LK+L ++ I ++R +V + K+
Sbjct: 47 IVALKRIRLDAEDEGIPSTAIR-EISLLKELH-HPNIVSLIDVIHSERCLTLVFEFMEKD 104
Query: 97 LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L ++ G + L Q+L+ + H LHRD+KP N I ++ +
Sbjct: 105 LKKVLDENKTGLQDSQIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLI----NSDGALK 159
Query: 157 MLDFGLARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDL 215
+ DFGLAR + +R++ + + RAP G +K+ D+
Sbjct: 160 LADFGLARAFGIP--VRSYTHEVVTLWYRAPDVLMG--------------SKKYSTSVDI 203
Query: 216 WSLFYMLVEFVN 227
WS+ + E +
Sbjct: 204 WSIGCIFAEMIT 215
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 131 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 185
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 186 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 218
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSXIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 41/99 (41%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +HS+ H D+KP N + R+ ++DFGLA + +E +N
Sbjct: 122 QILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKN----- 176
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
GT + + + +G D+WS+
Sbjct: 177 ------------IFGTPAFVAPEIVNYEPLGLEADMWSI 203
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 36/129 (27%), Positives = 61/129 (47%), Gaps = 11/129 (8%)
Query: 37 LVTKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRND-RFNYVVMQLQGK 95
+V KE + E+ R LK EV V++ L+ +V +FIG D R N++ ++G
Sbjct: 38 MVMKELIRFDEETQRT---FLK-EVKVMRCLE-HPNVLKFIGVLYKDKRLNFITEYIKGG 92
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L + ++ + S + I + +HS+ +HRD+ N L ++ V
Sbjct: 93 TLRGIIKSM-DSQYPWSQRVSFAKDIASGMAYLHSMNIIHRDLNSHNC----LVRENKNV 147
Query: 156 YMLDFGLAR 164
+ DFGLAR
Sbjct: 148 VVADFGLAR 156
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 39.3 bits (90), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 10/126 (7%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 36 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 94
Query: 98 AELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYM 157
A F + + + Q + ++ +H+ +HRD+K +N + H V +
Sbjct: 95 YHHLHAS-ETKFEMKKLIDIARQTARGMDYLHAKSIIHRDLKSNNIFL----HEDNTVKI 149
Query: 158 LDFGLA 163
DFGLA
Sbjct: 150 GDFGLA 155
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 57/116 (49%), Gaps = 5/116 (4%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTTLRLG 118
E+++LK L ++ + + ++ Y+V + +G L E + R F +
Sbjct: 96 EISLLKSLD-HPNIIKLFDVFEDKKYFYLVTEFYEGGELFE--QIINRHKFDECDAANIM 152
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
QIL I +H +HRDIKP N + +++ + ++DFGL+ ++ +LR+
Sbjct: 153 KQILSGICYLHKHNIVHRDIKPENILLEN-KNSLLNIKIVDFGLSSFFSKDYKLRD 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 116 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 160
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 161 ISDGA-----TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 155
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 156 ISDGA-----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 209 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 263
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 264 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 296
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 143 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 197
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 198 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 230
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 168 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 222
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 223 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 255
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 166 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 220
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 221 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 253
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 164 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 218
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 219 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 251
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 33/194 (17%)
Query: 38 VTKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
+ K+ VA+K E A + ++ E V+ KL + V + C V ++
Sbjct: 30 LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHG 88
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L++ R Q RG F+ T L + + + + + + +HRD+ N +G Q +
Sbjct: 89 CLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ----VI 143
Query: 156 YMLDFGLAR-----QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
+ DFG+ R QYT+S+ G + V++AS
Sbjct: 144 KVSDFGMTRFVLDDQYTSST--------------------GTKFPVKWASPEVFSFSRYS 183
Query: 211 RHDDLWSLFYMLVE 224
D+WS ++ E
Sbjct: 184 SKSDVWSFGVLMWE 197
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/176 (25%), Positives = 73/176 (41%), Gaps = 34/176 (19%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQ-----PRGAFSLSTT 114
E++++K+L+ E++ R + +V + +L + ++ PRG L+
Sbjct: 53 EISLMKELK-HENIVRLYDVIHTENKLTLVFEFMDNDLKKYMDSRTVGNTPRG-LELNLV 110
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
Q+L+ + H LHRD+KP N I + ++ + DFGLAR +
Sbjct: 111 KYFQWQLLQGLAFCHENKILHRDLKPQNLLINK----RGQLKLGDFGLARAFGIP----- 161
Query: 175 FNTTSSGEV----RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
NT SS V RAP G R SI D+WS +L E +
Sbjct: 162 VNTFSSEVVTLWYRAPDVLMGSR--TYSTSI------------DIWSCGCILAEMI 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 38.9 bits (89), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 155
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 156 ISDGA-----TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 158 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 212
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 213 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 245
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 130 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 184
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP G T +SI D+WS +L E +
Sbjct: 185 SRYYRAPELIFG--ATDYTSSI------------DVWSAGCVLAELL 217
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 45/107 (42%), Gaps = 19/107 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ +++ IHS G HRDIKP N L + + + DFG A+Q N +
Sbjct: 135 QLFRSLAYIHSFGICHRDIKPQNL---LLDPDTAVLKLCDFGSAKQLVRGEP--NVSYIC 189
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
S RAP F T +SI D+WS +L E +
Sbjct: 190 SRYYRAPELI--FGATDYTSSI------------DVWSAGCVLAELL 222
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 114 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 158
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 159 ISDGA-----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 33/194 (17%)
Query: 38 VTKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
+ K+ VA+K E A + ++ E V+ KL + V + C V ++
Sbjct: 29 LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L++ R Q RG F+ T L + + + + + + +HRD+ N +G Q +
Sbjct: 88 CLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEASVIHRDLAARNCLVGENQ----VI 142
Query: 156 YMLDFGLAR-----QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
+ DFG+ R QYT+S+ G + V++AS
Sbjct: 143 KVSDFGMTRFVLDDQYTSST--------------------GTKFPVKWASPEVFSFSRYS 182
Query: 211 RHDDLWSLFYMLVE 224
D+WS ++ E
Sbjct: 183 SKSDVWSFGVLMWE 196
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 155
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 156 ISDGA-----TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 155
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 156 ISDGA-----TMKTFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 38.9 bits (89), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/115 (25%), Positives = 49/115 (42%), Gaps = 20/115 (17%)
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
G +I+ A+E +HS ++RDIK N + + H + + DFGL ++
Sbjct: 111 GAEIVSALEYLHSRDVVYRDIKLENLMLDKDGH----IKITDFGLCKE-----------G 155
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S G F GT Y + ++ + GR D W L ++ E + + P
Sbjct: 156 ISDGA-----TMKXFCGTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 74/180 (41%), Gaps = 39/180 (21%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ +++ ++L + RGA
Sbjct: 58 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERMEPVQDLFDF--ITERGALQEEL 115
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDFGLARQYTTS 169
Q+L+A+ H+ G LHRDIK N I G L+ ++DFG
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDFG-------- 160
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 161 ----------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 208
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 43 VALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRR 102
+ L+ E P ++ E+++LK+L+ V + R V L ++L +L
Sbjct: 34 IRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLD 91
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
G S++ L +Q+L I H LHRD+KP N I R + + DFGL
Sbjct: 92 VCEGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKPQNLLINR----EGELKIADFGL 146
Query: 163 ARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
AR + +R + + + RAP G +K+ D+WS+ +
Sbjct: 147 ARAFGIP--VRKYTHEVVTLWYRAPDVLMG--------------SKKYSTTIDIWSVGCI 190
Query: 222 LVEFVN 227
E VN
Sbjct: 191 FAEMVN 196
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 43 VALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRR 102
+ L+ E P ++ E+++LK+L+ V + R V L ++L +L
Sbjct: 34 IRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLD 91
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
G S++ L +Q+L I H LHRD+KP N I R + + DFGL
Sbjct: 92 VCEGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKPQNLLINR----EGELKIADFGL 146
Query: 163 ARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
AR + +R + + + RAP G +K+ D+WS+ +
Sbjct: 147 ARAFGIP--VRKYTHEVVTLWYRAPDVLMG--------------SKKYSTTIDIWSVGCI 190
Query: 222 LVEFVN 227
E VN
Sbjct: 191 FAEMVN 196
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.5 bits (88), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 10/80 (12%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI-QILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + +LA + P L RL + Q+L+ ++ IHS LHRD+KP+N I
Sbjct: 98 YIVQEYMETDLANVLEQGPL----LEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFI 153
Query: 146 GRLQHTSRRVYML-DFGLAR 164
+T V + DFGLAR
Sbjct: 154 ----NTEDLVLKIGDFGLAR 169
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 33/194 (17%)
Query: 38 VTKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
+ K+ VA+K E A + ++ E V+ KL + V + C V ++
Sbjct: 29 LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 87
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L++ R Q RG F+ T L + + + + + + +HRD+ N +G Q +
Sbjct: 88 CLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ----VI 142
Query: 156 YMLDFGLAR-----QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
+ DFG+ R QYT+S+ G + V++AS
Sbjct: 143 KVSDFGMTRFVLDDQYTSST--------------------GTKFPVKWASPEVFSFSRYS 182
Query: 211 RHDDLWSLFYMLVE 224
D+WS ++ E
Sbjct: 183 SKSDVWSFGVLMWE 196
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 33/194 (17%)
Query: 38 VTKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
+ K+ VA+K E A + ++ E V+ KL + V + C V ++
Sbjct: 32 LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 90
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L++ R Q RG F+ T L + + + + + + +HRD+ N +G Q +
Sbjct: 91 CLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ----VI 145
Query: 156 YMLDFGLAR-----QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
+ DFG+ R QYT+S+ G + V++AS
Sbjct: 146 KVSDFGMTRFVLDDQYTSST--------------------GTKFPVKWASPEVFSFSRYS 185
Query: 211 RHDDLWSLFYMLVE 224
D+WS ++ E
Sbjct: 186 SKSDVWSFGVLMWE 199
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 43/194 (22%), Positives = 77/194 (39%), Gaps = 33/194 (17%)
Query: 38 VTKENVALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK 95
+ K+ VA+K E A + ++ E V+ KL + V + C V ++
Sbjct: 27 LNKDKVAIKTIREGAMSEEDFIE-EAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHG 85
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
L++ R Q RG F+ T L + + + + + + +HRD+ N +G Q +
Sbjct: 86 CLSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGENQ----VI 140
Query: 156 YMLDFGLAR-----QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMG 210
+ DFG+ R QYT+S+ G + V++AS
Sbjct: 141 KVSDFGMTRFVLDDQYTSST--------------------GTKFPVKWASPEVFSFSRYS 180
Query: 211 RHDDLWSLFYMLVE 224
D+WS ++ E
Sbjct: 181 SKSDVWSFGVLMWE 194
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 47/186 (25%), Positives = 77/186 (41%), Gaps = 24/186 (12%)
Query: 43 VALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRR 102
+ L+ E P ++ E+++LK+L+ V + R V L ++L +L
Sbjct: 34 IRLEKEDEGIPSTTIR-EISILKELKHSNIVKLYDVIHTKKRLVLVFEHLD-QDLKKLLD 91
Query: 103 AQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
G S++ L +Q+L I H LHRD+KP N I R + + DFGL
Sbjct: 92 VCEGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKPQNLLINR----EGELKIADFGL 146
Query: 163 ARQYTTSSELRNF-NTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
AR + +R + + + RAP G +K+ D+WS+ +
Sbjct: 147 ARAFGIP--VRKYTHEIVTLWYRAPDVLMG--------------SKKYSTTIDIWSVGCI 190
Query: 222 LVEFVN 227
E VN
Sbjct: 191 FAEMVN 196
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 61/143 (42%), Gaps = 25/143 (17%)
Query: 86 NYVVMQLQGKNLAELRRAQPR--GAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNF 143
NYV + L+ + E+ R FS + QI+ + +HS G LHRD+ SN
Sbjct: 84 NYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQIITGMLYLHSHGILHRDLTLSNL 143
Query: 144 SIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINA 203
+ R + + + DFGLA Q E +++ + +P A+ +A
Sbjct: 144 LLTR----NMNIKIADFGLATQLKMPHE-KHYTLCGTPNYISPEI----------ATRSA 188
Query: 204 HKNKEMGRHDDLWSL---FYMLV 223
H G D+WSL FY L+
Sbjct: 189 H-----GLESDVWSLGCMFYTLL 206
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 34/130 (26%), Positives = 54/130 (41%), Gaps = 22/130 (16%)
Query: 120 QILKAIESIH--SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNT 177
Q++++I +H SV HRDIKP N + T + + DFG A++ + S N
Sbjct: 137 QLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLK---LCDFGSAKKLSPSEP--NVAY 191
Query: 178 TSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPR 237
S RAP G N H + D+WS+ + E + + P+ +
Sbjct: 192 ICSRYYRAPELIFG----------NQHYTTAV----DIWSVGCIFAEMM-LGEPIFRGDN 236
Query: 238 AAAGFRGTVR 247
+A VR
Sbjct: 237 SAGQLHEIVR 246
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 38.5 bits (88), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 103 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 159
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 160 IDQQGY----IQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 210
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 4 EDLLQQGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKV----ESARQPKQVLKM 59
E+L QG ER+ ++ D +T++ A+KV + + +
Sbjct: 12 ENLYFQGTFA-ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRL 117
EV +LKKL ++ + + Y+V +L G+ E+ + R FS R+
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARI 126
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
Q+ I +H +HRD+KP N + + + ++DFGL+ + ++++++
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLES-KEKDCDIKIIDFGLSTCFQQNTKMKD 182
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 38.1 bits (87), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 4 EDLLQQGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKV----ESARQPKQVLKM 59
E+L QG ER+ ++ D +T++ A+KV + + +
Sbjct: 12 ENLYFQGTFA-ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRL 117
EV +LKKL ++ + + Y+V +L G+ E+ + R FS R+
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARI 126
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
Q+ I +H +HRD+KP N + + + ++DFGL+ + ++++++
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLES-KEKDCDIKIIDFGLSTCFQQNTKMKD 182
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWTLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 38.1 bits (87), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/172 (23%), Positives = 67/172 (38%), Gaps = 32/172 (18%)
Query: 70 KEHVCRFI----GCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAI 125
K H C +I G + ++ M+L G AE + + +G ++ + I+KA+
Sbjct: 79 KSHDCPYIVQCFGTFITNTDVFIAMELMG-TCAEKLKKRMQGPIPERILGKMTVAIVKAL 137
Query: 126 ESIHSV-GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVR 184
+ G +HRD+KPSN L ++ + DFG+ SG +
Sbjct: 138 YYLKEKHGVIHRDVKPSNI----LLDERGQIKLCDFGI-----------------SGRLV 176
Query: 185 APRAAAGFRGTVRYASINAHKNKEMGRHD-----DLWSLFYMLVEFVNIQHP 231
+A G Y + + + D D+WSL LVE Q P
Sbjct: 177 DDKAKDRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 39/177 (22%), Positives = 78/177 (44%), Gaps = 12/177 (6%)
Query: 4 EDLLQQGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKV----ESARQPKQVLKM 59
E+L QG ER+ ++ D +T++ A+KV + + +
Sbjct: 12 ENLYFQGTFA-ERYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILR 70
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRL 117
EV +LKKL ++ + + Y+V +L G+ E+ + R FS R+
Sbjct: 71 EVELLKKLD-HPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIK---RKRFSEHDAARI 126
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
Q+ I +H +HRD+KP N + + + ++DFGL+ + ++++++
Sbjct: 127 IKQVFSGITYMHKHNIVHRDLKPENILLES-KEKDCDIKIIDFGLSTCFQQNTKMKD 182
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.7 bits (86), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEALAPEIILSKGYNKAVDWWAL 224
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 48/110 (43%), Gaps = 28/110 (25%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ AIE H +HRD+KP N L + V + DFGL+ T NF TS
Sbjct: 116 QIICAIEYCHRHKIVHRDLKPENL----LLDDNLNVKIADFGLSNIMTDG----NFLKTS 167
Query: 180 SGEVRAPRAAAG--FRGTVRYASINAHKNKEMGRHDDLWS----LFYMLV 223
G +P AA G + YA G D+WS L+ MLV
Sbjct: 168 CG---SPNYAAPEVINGKL-YA----------GPEVDVWSCGIVLYVMLV 203
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 110 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 166
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 167 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 40/193 (20%), Positives = 76/193 (39%), Gaps = 31/193 (16%)
Query: 38 VTKENVALK-VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
+ K+ VA+K ++ + E V+ KL + V + C V ++
Sbjct: 49 LNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGC 108
Query: 97 LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L++ R Q RG F+ T L + + + + + + +HRD+ N +G ++ +
Sbjct: 109 LSDYLRTQ-RGLFAAETLLGMCLDVCEGMAYLEEACVIHRDLAARNCLVGE----NQVIK 163
Query: 157 MLDFGLAR-----QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGR 211
+ DFG+ R QYT+S+ G + V++AS
Sbjct: 164 VSDFGMTRFVLDDQYTSST--------------------GTKFPVKWASPEVFSFSRYSS 203
Query: 212 HDDLWSLFYMLVE 224
D+WS ++ E
Sbjct: 204 KSDVWSFGVLMWE 216
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 37/137 (27%), Positives = 60/137 (43%), Gaps = 10/137 (7%)
Query: 36 DLVTKENVALKV-----ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D VT E VA+K E P ++ EV++LK+LQ + + N R +++
Sbjct: 55 DTVTNETVAIKRIRLEHEEEGVPGTAIR-EVSLLKELQHRNIIELKSVIHHNHRL-HLIF 112
Query: 91 QLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
+ +L + P S+ Q++ + HS LHRD+KP N +
Sbjct: 113 EYAENDLKKYMDKNPD--VSMRVIKSFLYQLINGVNFCHSRRCLHRDLKPQNLLLSVSDA 170
Query: 151 TSRRVYML-DFGLARQY 166
+ V + DFGLAR +
Sbjct: 171 SETPVLKIGDFGLARAF 187
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYMPGGDMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLI 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPR--AAAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIIISKGYNKAVDWWAL 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYMPGGDMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 138 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 195 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 20/109 (18%)
Query: 124 AIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEV 183
++ +HS+G ++RD+KP N + H + + DFGL+++ +
Sbjct: 142 GLDHLHSLGIIYRDLKPENILLDEEGH----IKLTDFGLSKE----------------AI 181
Query: 184 RAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
+ A F GTV Y + + D WS ++ E + P
Sbjct: 182 DHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPF 230
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 37.7 bits (86), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/80 (23%), Positives = 39/80 (48%), Gaps = 8/80 (10%)
Query: 82 NDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPS 141
D Y+VM+ G + + Q ++ + ++IL A+ +HS+G ++ D+KP
Sbjct: 155 GDPVGYIVMEYVGGQSLKRSKGQ---KLPVAEAIAYLLEILPALSYLHSIGLVYNDLKPE 211
Query: 142 NFSIGRLQHTSRRVYMLDFG 161
N + T ++ ++D G
Sbjct: 212 NIML-----TEEQLKLIDLG 226
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 37.4 bits (85), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 43/111 (38%), Gaps = 22/111 (19%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 145 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 182
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRAAAGFR 243
GT Y S + D+WS+ LVE ++P+ + A F
Sbjct: 183 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSMAIFE 233
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 37.4 bits (85), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLAGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 104 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 160
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 161 IDEQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 211
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 153 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 190
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRA 238
GT Y S + D+WS+ LVE ++P + P A
Sbjct: 191 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDA 235
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 149
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 150 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 203
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 204 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 246
Query: 222 LVEFV 226
L + V
Sbjct: 247 LYDMV 251
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 40 KENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
K NVA+K + K+ E ++K L H+ + IG + +++M+L
Sbjct: 52 KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEEP-TWIIMELYP-- 107
Query: 97 LAELRRAQPRGAFSLS--TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
EL R SL T + +QI KA+ + S+ +HRDI N + +
Sbjct: 108 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA----SPEC 163
Query: 155 VYMLDFGLAR 164
V + DFGL+R
Sbjct: 164 VKLGDFGLSR 173
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/100 (26%), Positives = 40/100 (40%), Gaps = 22/100 (22%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 188 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 225
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
GT Y S + D+WS+ LVE ++P+
Sbjct: 226 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 40/210 (19%), Positives = 85/210 (40%), Gaps = 33/210 (15%)
Query: 43 VALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFN-YVVMQLQGK-NLAEL 100
VA+K Q E +V+ +L+ ++ + +G ++ Y+V + K +L +
Sbjct: 38 VAVKCIKNDATAQAFLAEASVMTQLR-HSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDY 96
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R++ R L+ + + +A+E + F+HRD+ N L + DF
Sbjct: 97 LRSRGRSVLGGDCLLKFSLDVCEAMEYLEGNNFVHRDLAARNV----LVSEDNVAKVSDF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS--- 217
GL ++ ++ T +G++ V++ + A + D+WS
Sbjct: 153 GLTKEASS--------TQDTGKL-----------PVKWTAPEALREAAFSTKSDVWSFGI 193
Query: 218 LFYMLVEFVNIQHPLVK----APRAAAGFR 243
L + + F + +P + PR G++
Sbjct: 194 LLWEIYSFGRVPYPRIPLKDVVPRVEKGYK 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 40 KENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
K NVA+K + K+ E ++K L H+ + IG + +++M+L
Sbjct: 36 KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEEP-TWIIMELYP-- 91
Query: 97 LAELRRAQPRGAFSLS--TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
EL R SL T + +QI KA+ + S+ +HRDI N + +
Sbjct: 92 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA----SPEC 147
Query: 155 VYMLDFGLAR 164
V + DFGL+R
Sbjct: 148 VKLGDFGLSR 157
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 31/119 (26%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLXGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 37.4 bits (85), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 47/102 (46%), Gaps = 13/102 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAP 186
I + + + + DFG A++ R + + E AP
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAP 207
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 38/73 (52%), Gaps = 3/73 (4%)
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
+RL QIL+ + +H +H D+KP N + + + + ++DFG++R+ + ELR
Sbjct: 134 IRLIKQILEGVYYLHQNNIVHLDLKPQNILLSSI-YPLGDIKIVDFGMSRKIGHACELRE 192
Query: 175 FNTTSSGEVRAPR 187
T E AP
Sbjct: 193 IMGTP--EYLAPE 203
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 70/189 (37%), Gaps = 57/189 (30%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 59 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 107
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDF 160
RGA Q+L+A+ H+ G LHRDIK N I G L+ ++DF
Sbjct: 108 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDF 160
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWS 217
G SG + F GT Y+ I H+ GR +WS
Sbjct: 161 G------------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWS 200
Query: 218 LFYMLVEFV 226
L +L + V
Sbjct: 201 LGILLYDMV 209
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 13/130 (10%)
Query: 40 KENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
K NVA+K + K+ E ++K L H+ + IG + +++M+L
Sbjct: 40 KINVAVKTCKKDCTLDNKEKFMSEAVIMKNLD-HPHIVKLIGIIEEEP-TWIIMELYP-- 95
Query: 97 LAELRRAQPRGAFSLS--TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR 154
EL R SL T + +QI KA+ + S+ +HRDI N + +
Sbjct: 96 YGELGHYLERNKNSLKVLTLVLYSLQICKAMAYLESINCVHRDIAVRNILVA----SPEC 151
Query: 155 VYMLDFGLAR 164
V + DFGL+R
Sbjct: 152 VKLGDFGLSR 161
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 126 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 163
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRA 238
GT Y S + D+WS+ LVE ++P + P A
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDA 208
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 126 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 163
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRA 238
GT Y S + D+WS+ LVE ++P + P A
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDA 208
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 37.4 bits (85), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 126 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 163
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRA 238
GT Y S + D+WS+ LVE ++P + P A
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDA 208
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 35/140 (25%), Positives = 56/140 (40%), Gaps = 28/140 (20%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 138 YMVMEYVAGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAH 204
I + + + + DFG A+ R A GT Y +
Sbjct: 195 IDQQGY----IQVTDFGFAK-------------------RVKGATWTLCGTPEYLAPEII 231
Query: 205 KNKEMGRHDDLWSLFYMLVE 224
+K + D W+L ++ E
Sbjct: 232 LSKGYNKAVDWWALGVLIYE 251
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 63 EASVMKEFNC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 121
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 122 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIXETD 177
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 178 XXRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 221
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ + + ++L + RGA
Sbjct: 57 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEEL 114
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDFGLARQYTTS 169
Q+L+A+ H+ G LHRDIK N I G L+ ++DFG
Sbjct: 115 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDFG-------- 159
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 160 ----------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 207
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 37.0 bits (84), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 126 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 163
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRA 238
GT Y S + D+WS+ LVE ++P + P A
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDA 208
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 149
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 150 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 203
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 204 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 246
Query: 222 LVEFV 226
L + V
Sbjct: 247 LYDMV 251
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 86/227 (37%), Gaps = 36/227 (15%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 72 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIXETD 186
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E
Sbjct: 187 XXRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT- 229
Query: 229 QHPLVKAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 275
L + P +R+ +K D L+ L M ++
Sbjct: 230 ---LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQY 273
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ + + ++L + RGA
Sbjct: 58 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEEL 115
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDFGLARQYTTS 169
Q+L+A+ H+ G LHRDIK N I G L+ ++DFG
Sbjct: 116 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDFG-------- 160
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 161 ----------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 208
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 42/106 (39%), Gaps = 23/106 (21%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 126 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 163
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVKAPRA 238
GT Y S + D+WS+ LVE ++P + P A
Sbjct: 164 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP-IPPPDA 208
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/106 (21%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 43 VALKV-ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNY-----VVMQLQGKN 96
VALK+ ++ + K+ ++E+ VL+K+ K+ + + D F+Y + +L G +
Sbjct: 62 VALKIIKNVEKYKEAARLEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLS 121
Query: 97 LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSN 142
+ + + + + Q+ +A++ +H H D+KP N
Sbjct: 122 TFDFLKDNNYLPYPIHQVRHMAFQLCQAVKFLHDNKLTHTDLKPEN 167
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 37.0 bits (84), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ + + ++L + RGA
Sbjct: 59 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEEL 116
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDFGLARQYTTS 169
Q+L+A+ H+ G LHRDIK N I G L+ ++DFG
Sbjct: 117 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDFG-------- 161
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 162 ----------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 209
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 135
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 189
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 190 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 232
Query: 222 LVEFV 226
L + V
Sbjct: 233 LYDMV 237
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ + + ++L + RGA
Sbjct: 54 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEEL 111
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDFGLARQYTTS 169
Q+L+A+ H+ G LHRDIK N I G L+ ++DFG
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDFG-------- 156
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 157 ----------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 204
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 70/189 (37%), Gaps = 57/189 (30%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 73 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 121
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDF 160
RGA Q+L+A+ H+ G LHRDIK N I G L+ ++DF
Sbjct: 122 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDF 174
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWS 217
G SG + F GT Y+ I H+ GR +WS
Sbjct: 175 G------------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWS 214
Query: 218 LFYMLVEFV 226
L +L + V
Sbjct: 215 LGILLYDMV 223
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 70/189 (37%), Gaps = 57/189 (30%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 134
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDF 160
RGA Q+L+A+ H+ G LHRDIK N I G L+ ++DF
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDF 187
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWS 217
G SG + F GT Y+ I H+ GR +WS
Sbjct: 188 G------------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWS 227
Query: 218 LFYMLVEFV 226
L +L + V
Sbjct: 228 LGILLYDMV 236
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 70/189 (37%), Gaps = 57/189 (30%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 73 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 121
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDF 160
RGA Q+L+A+ H+ G LHRDIK N I G L+ ++DF
Sbjct: 122 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDF 174
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWS 217
G SG + F GT Y+ I H+ GR +WS
Sbjct: 175 G------------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWS 214
Query: 218 LFYMLVEFV 226
L +L + V
Sbjct: 215 LGILLYDMV 223
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 135
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 189
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 190 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 232
Query: 222 LVEFV 226
L + V
Sbjct: 233 LYDMV 237
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 134
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 188
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 189 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 231
Query: 222 LVEFV 226
L + V
Sbjct: 232 LYDMV 236
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 135
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 189
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 190 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 232
Query: 222 LVEFV 226
L + V
Sbjct: 233 LYDMV 237
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 87 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 135
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 136 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 189
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 190 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 232
Query: 222 LVEFV 226
L + V
Sbjct: 233 LYDMV 237
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 134
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 188
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 189 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 231
Query: 222 LVEFV 226
L + V
Sbjct: 232 LYDMV 236
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 37.0 bits (84), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 51/189 (26%), Positives = 70/189 (37%), Gaps = 57/189 (30%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 59 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 107
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDF 160
RGA Q+L+A+ H+ G LHRDIK N I G L+ ++DF
Sbjct: 108 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELK-------LIDF 160
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWS 217
G SG + F GT Y+ I H+ GR +WS
Sbjct: 161 G------------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWS 200
Query: 218 LFYMLVEFV 226
L +L + V
Sbjct: 201 LGILLYDMV 209
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 86 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 134
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 135 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILIDL---NRGELKLIDFG--- 188
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 189 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 231
Query: 222 LVEFV 226
L + V
Sbjct: 232 LYDMV 236
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 22/114 (19%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T +L F
Sbjct: 119 QIVSAVQYCHQKRIVHRDLKAENL----LLDADMNIKIADFGFSNEFTVGGKLDTFC--- 171
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRHDDLWSLFYMLVEFVNIQHPL 232
G+ YA+ + K+ G D+WSL +L V+ P
Sbjct: 172 --------------GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 211
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 74 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 122
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 176
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 177 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 219
Query: 222 LVEFV 226
L + V
Sbjct: 220 LYDMV 224
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 57/151 (37%), Gaps = 29/151 (19%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKKVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + A GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPLVKAPRAAAGFRGTVRYAS 250
+ EF+ + K P A ++ T + S
Sbjct: 194 VLCYEFL-----VGKPPFEANTYQDTYKRIS 219
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 81 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 129
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 130 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 183
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 184 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 226
Query: 222 LVEFV 226
L + V
Sbjct: 227 LYDMV 231
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 37.0 bits (84), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 101 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 149
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 150 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 203
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 204 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 246
Query: 222 LVEFV 226
L + V
Sbjct: 247 LYDMV 251
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/116 (24%), Positives = 51/116 (43%), Gaps = 20/116 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+++ AI+S+H + ++HRDIKP N L + + + DFG + +++
Sbjct: 183 EMVIAIDSVHQLHYVHRDIKPDNI----LMDMNGHIRLADFGSCLKLMEDGTVQSSVAVG 238
Query: 180 SGEVRAP---RAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
+ + +P +A G +G RY G D WSL + E + + P
Sbjct: 239 TPDYISPEILQAMEGGKG--RY-----------GPECDWWSLGVCMYEMLYGETPF 281
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 37.0 bits (84), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 74 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 122
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 176
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 177 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 219
Query: 222 LVEFV 226
L + V
Sbjct: 220 LYDMV 224
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLA--ELRRAQPRGAFSLST 113
LK E ++ L+ H+ + +D Y+V + + G +L ++RA +S +
Sbjct: 73 LKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 131
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL+A+ H +HRD+KP + + S V + FG+A Q S
Sbjct: 132 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS-KENSAPVKLGGFGVAIQLGESG--- 187
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYML 222
A G GT + + K + G+ D+W +L
Sbjct: 188 -------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 223
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 47/176 (26%), Positives = 71/176 (40%), Gaps = 31/176 (17%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ + + ++L + RGA
Sbjct: 54 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEEL 111
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 112 ARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG------------ 156
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 157 ------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 204
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 74 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 122
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 123 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 176
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 177 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 219
Query: 222 LVEFV 226
L + V
Sbjct: 220 LYDMV 224
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 36.6 bits (83), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 93 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 141
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 142 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 195
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 196 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 238
Query: 222 LVEFV 226
L + V
Sbjct: 239 LYDMV 243
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 40 KENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
K V +KV +S RQ Q + + + L H+ R +G V L +
Sbjct: 42 KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCPGSSLQLVTQYLPLGS 100
Query: 97 LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + R Q RGA L G+QI K + + G +HR++ N L + +V
Sbjct: 101 LLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNV----LLKSPSQVQ 155
Query: 157 MLDFGLA 163
+ DFG+A
Sbjct: 156 VADFGVA 162
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 68/185 (36%), Gaps = 49/185 (26%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQGKNLAELRRAQP--------- 105
+ MEV +LKK+ G V R + R D F + L R +P
Sbjct: 106 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLI-----------LERPEPVQDLFDFIT 154
Query: 106 -RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
RGA Q+L+A+ H+ G LHRDIK N I + ++DFG
Sbjct: 155 ERGALQEELARSFFWQVLEAVRHCHNCGVLHRDIKDENILI---DLNRGELKLIDFG--- 208
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYM 221
SG + F GT Y+ I H+ GR +WSL +
Sbjct: 209 ---------------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGIL 251
Query: 222 LVEFV 226
L + V
Sbjct: 252 LYDMV 256
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/169 (23%), Positives = 67/169 (39%), Gaps = 21/169 (12%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLA--ELRRAQPRGAFSLST 113
LK E ++ L+ H+ + +D Y+V + + G +L ++RA +S +
Sbjct: 75 LKREASICHMLK-HPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAV 133
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
QIL+A+ H +HRD+KP + + S V + FG+A Q S
Sbjct: 134 ASHYMRQILEALRYCHDNNIIHRDVKPHCVLLAS-KENSAPVKLGGFGVAIQLGESG--- 189
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYML 222
A G GT + + K + G+ D+W +L
Sbjct: 190 -------------LVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVIL 225
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 57/126 (45%), Gaps = 3/126 (2%)
Query: 39 TKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLA 98
T++ ALKV K++++ E+ VL +L + + V+ + G L
Sbjct: 77 TQKPYALKVLKKTVDKKIVRTEIGVLLRLSHPNIIKLKEIFETPTEISLVLELVTGGELF 136
Query: 99 ELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYML 158
+ R +G +S QIL+A+ +H G +HRD+KP N + + +
Sbjct: 137 D--RIVEKGYYSERDAADAVKQILEAVAYLHENGIVHRDLKPENL-LYATPAPDAPLKIA 193
Query: 159 DFGLAR 164
DFGL++
Sbjct: 194 DFGLSK 199
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 155
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + A GT+ Y + + DLWSL
Sbjct: 156 GWS-------------------VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 197 VLCYEFLVGKPPF 209
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 36.6 bits (83), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L F
Sbjct: 122 QIVSAVQYCHQKYIVHRDLKAENL----LLDGDMNIKIADFGFSNEFTVGNKLDTF--CG 175
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S AP G K G D+WSL +L V+ P
Sbjct: 176 SPPYAAPELFQG--------------KKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 21/113 (18%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+I +E +H ++RD+KP N + H + + D GLA ++
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGH----IRISDLGLAVHVPEGQTIK------ 343
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
G GTV Y + KN+ D W+L +L E + Q P
Sbjct: 344 -----------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYAPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 54/127 (42%), Gaps = 9/127 (7%)
Query: 40 KENVALKV---ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
K V +KV +S RQ Q + + + L H+ R +G V L +
Sbjct: 60 KIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLD-HAHIVRLLGLCPGSSLQLVTQYLPLGS 118
Query: 97 LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + R Q RGA L G+QI K + + G +HR++ N L + +V
Sbjct: 119 LLDHVR-QHRGALGPQLLLNWGVQIAKGMYYLEEHGMVHRNLAARNV----LLKSPSQVQ 173
Query: 157 MLDFGLA 163
+ DFG+A
Sbjct: 174 VADFGVA 180
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYAPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLM 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IKVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 39 TKENVALKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK-NL 97
T + VA+K Q + E++++++ HV ++ G + ++VM+ G ++
Sbjct: 53 TGQIVAIKQVPVESDLQEIIKEISIMQQCDSP-HVVKYYGSYFKNTDLWIVMEYCGAGSV 111
Query: 98 AELRRAQPRGAFS--LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRV 155
+++ R + + ++T L+ LK +E +H + +HRDIK N L +T
Sbjct: 112 SDIIRLRNKTLTEDEIATILQ---STLKGLEYLHFMRKIHRDIKAGNI----LLNTEGHA 164
Query: 156 YMLDFGLARQYTTSSELRN 174
+ DFG+A Q T RN
Sbjct: 165 KLADFGVAGQLTDXMAKRN 183
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 49/180 (27%), Positives = 73/180 (40%), Gaps = 39/180 (21%)
Query: 57 LKMEVAVLKKLQ-GKEHVCRFIGC-GRNDRFNYVVMQLQG-KNLAELRRAQPRGAFSLST 113
+ MEV +LKK+ G V R + R D F ++ + + ++L + RGA
Sbjct: 54 VPMEVVLLKKVSSGFSGVIRLLDWFERPDSFVLILERPEPVQDLFDF--ITERGALQEEL 111
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSI----GRLQHTSRRVYMLDFGLARQYTTS 169
Q+L+A+ H+ G LHRDIK N I G L+ ++DFG
Sbjct: 112 ARSFFWQVLEAVRHCHNXGVLHRDIKDENILIDLNRGELK-------LIDFG-------- 156
Query: 170 SELRNFNTTSSGEVRAPRAAAGFRGTVRYAS---INAHKNKEMGRHDDLWSLFYMLVEFV 226
SG + F GT Y+ I H+ GR +WSL +L + V
Sbjct: 157 ----------SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH--GRSAAVWSLGILLYDMV 204
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F+ QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFAEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 36.6 bits (83), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 70/188 (37%), Gaps = 43/188 (22%)
Query: 55 QVLKMEVAVLKKLQGKEH---------------VCRFIGCGRNDRFNYVVMQ-LQGKNLA 98
+VLK E+ V +L+ EH + R G ++ + +++M ++G L
Sbjct: 37 KVLKKEIVV--RLKQVEHTNDERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELF 94
Query: 99 ELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYML 158
L R R F ++ A+E +HS ++RD+KP N + + H + +
Sbjct: 95 SLLRKSQR--FPNPVAKFYAAEVCLALEYLHSKDIIYRDLKPENILLDKNGH----IKIT 148
Query: 159 DFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
DFG A+ P GT Y + K + D WS
Sbjct: 149 DFGFAK-------------------YVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSF 189
Query: 219 FYMLVEFV 226
++ E +
Sbjct: 190 GILIYEML 197
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.6 bits (83), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +H+ H D+KP N + + ++DFGLA + E +N T
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 21/113 (18%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+I +E +H ++RD+KP N + H + + D GLA ++
Sbjct: 294 EICCGLEDLHRERIVYRDLKPENILLDDHGH----IRISDLGLAVHVPEGQTIK------ 343
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
G GTV Y + KN+ D W+L +L E + Q P
Sbjct: 344 -----------GRVGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 36.6 bits (83), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 54/119 (45%), Gaps = 15/119 (12%)
Query: 87 YVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+V++ G+ + LRR G FS QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVLEYAPGGEMFSHLRRI---GRFSEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IKVADFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 36.6 bits (83), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 42/103 (40%), Gaps = 11/103 (10%)
Query: 105 PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
PRG L QIL I +H+ LHRD+KP+N + RV + D G AR
Sbjct: 126 PRGMVK-----SLLYQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFAR 180
Query: 165 QYTTSSELRNFNTTSSGEV----RAPRAAAGFRGTVRYASINA 203
+ +S L+ V RAP G R + I A
Sbjct: 181 LF--NSPLKPLADLDPVVVTFWYRAPELLLGARHYTKAIDIWA 221
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 43/111 (38%), Gaps = 20/111 (18%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSS 180
+L+A+ +H+ G +HRDIK + L RV + DFG Q + R
Sbjct: 150 VLQALAYLHAQGVIHRDIKSDSI----LLTLDGRVKLSDFGFCAQISKDVPKRKX----- 200
Query: 181 GEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
GT + + D+WSL M++E V+ + P
Sbjct: 201 -----------LVGTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 36.2 bits (82), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+++ AI+SIH + ++HRDIKP N L + + + DFG
Sbjct: 199 EMVLAIDSIHQLHYVHRDIKPDNV----LLDVNGHIRLADFGSC-----------LKMND 243
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKE--MGRHD---DLWSLFYMLVEFVNIQHPL 232
G V++ A GT Y S + E MG++ D WSL + E + + P
Sbjct: 244 DGTVQSSVAV----GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 40/100 (40%), Gaps = 22/100 (22%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q S A F
Sbjct: 136 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLIDS------------------MANSF 173
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
GT Y + + D+WS+ LVE ++P+
Sbjct: 174 VGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 41/178 (23%), Positives = 68/178 (38%), Gaps = 31/178 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIG-CGRNDRFNYVVMQLQGKNLAELRRAQ-----------PRG 107
E +L LQ EH+ +F G C D V ++ +L + RA P
Sbjct: 65 EAELLTNLQ-HEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPT 123
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ S L + QI + + S F+HRD+ N +G + V + DFG++R
Sbjct: 124 ELTQSQMLHIAQQIAAGMVYLASQHFVHRDLATRNCLVGE----NLLVKIGDFGMSRDVY 179
Query: 168 TSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 225
++ R G P +R+ + ++ D+WSL +L E
Sbjct: 180 STDYYR-----VGGHTMLP---------IRWMPPESIMYRKFTTESDVWSLGVVLWEI 223
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 50/118 (42%), Gaps = 24/118 (20%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
+++ AI+SIH + ++HRDIKP N L + + + DFG
Sbjct: 183 EMVLAIDSIHQLHYVHRDIKPDNV----LLDVNGHIRLADFGSC-----------LKMND 227
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKE--MGRHD---DLWSLFYMLVEFVNIQHPL 232
G V++ A GT Y S + E MG++ D WSL + E + + P
Sbjct: 228 DGTVQSSVAV----GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 48/111 (43%), Gaps = 23/111 (20%)
Query: 122 LKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSG 181
L A+ +HS G +H D+KP+N +G R + DFGL L T +G
Sbjct: 167 LLALAHLHSQGLVHLDVKPANIFLG----PRGRCKLGDFGL---------LVELGTAGAG 213
Query: 182 EVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF-VNIQHP 231
EV+ G RY + + G D++SL ++E N++ P
Sbjct: 214 EVQ--------EGDPRYMAPELLQGS-YGTAADVFSLGLTILEVACNMELP 255
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 65 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCXVAE----DFTVKIGDFGMTRDIYETD 179
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 180 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 223
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +H+ H D+KP N + + ++DFGLA + E +N T
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 23/51 (45%)
Query: 96 NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
N L + P + +++L IE +H +H DIKP NF +G
Sbjct: 156 NAINLYKNTPEKVMPQGLVISFAMRMLYMIEQVHDCEIIHGDIKPDNFILG 206
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 36.2 bits (82), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 33/133 (24%), Positives = 50/133 (37%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + A GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRAALCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 36.2 bits (82), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 78 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 136
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 192
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 193 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 22/114 (19%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T +L
Sbjct: 122 QIVSAVQYCHQKRIVHRDLKAENL----LLDADMNIKIADFGFSNEFTVGGKL------- 170
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRHDDLWSLFYMLVEFVNIQHPL 232
F G YA+ + K+ G D+WSL +L V+ P
Sbjct: 171 ----------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPRGA-------FS 110
E +V+K+ HV R +G + V+M+L +G + LR +P A S
Sbjct: 78 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 136
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 137 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 192
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 193 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 236
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 72 EASVMKEFNC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 130
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 131 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 186
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 187 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 230
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +H+ H D+KP N + + ++DFGLA + E +N T
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 110 YMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 166
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 167 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +H+ H D+KP N + + ++DFGLA + E +N T
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 69 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 127
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 128 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 183
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 184 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 118 YMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 174
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 175 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 225
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 36.2 bits (82), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 71 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 185
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 186 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 40/180 (22%), Positives = 72/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 71 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 129
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 130 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 185
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 186 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 229
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVPGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L F
Sbjct: 114 QIVSAVQYCHQKFIVHRDLKAENL----LLDADMNIKIADFGFSNEFTFGNKLDTF--CG 167
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S AP G K G D+WSL +L V+ P
Sbjct: 168 SPPYAAPELFQG--------------KKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +H+ H D+KP N + + ++DFGLA + E +N T
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENL----LLDADMNIKIADFGFSNEFTFGNKLDTF--CG 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S AP G K G D+WSL +L V+ P
Sbjct: 175 SPPYAAPELFQG--------------KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 112 YMVMEYVAGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 168
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 169 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 219
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 32/199 (16%)
Query: 16 RWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVLKKLQ------ 68
R+ ++RK D+V +VA+K V + + + E+ +L+++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 69 ----GKEHVCRFIGCGRNDRFNY---------VVMQLQGKNLAELRRAQPRGAFSLSTTL 115
G H+ + + D FN+ +V ++ G+NL L + L
Sbjct: 80 EDSMGANHILKLL-----DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 116 RLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSR--RVYMLDFGLARQYTTSSEL 172
++ Q+L ++ +H G +H DIKP N + + ++ + D G A Y
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT- 193
Query: 173 RNFNTTSSGEVRAPRAAAG 191
N+ + E R+P G
Sbjct: 194 ---NSIQTREYRSPEVLLG 209
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENL----LLDADMNIKIADFGFSNEFTFGNKLDTF--CG 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S AP G K G D+WSL +L V+ P
Sbjct: 175 SPPYAAPELFQG--------------KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 41/180 (22%), Positives = 73/180 (40%), Gaps = 32/180 (17%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPRGA-------FS 110
E +V+K+ HV R +G + V+M+L +G + LR +P A S
Sbjct: 68 EASVMKEFNC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPS 126
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 127 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 182
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E +
Sbjct: 183 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 226
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 48/227 (21%), Positives = 86/227 (37%), Gaps = 36/227 (15%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 65 EASVMKEFNCH-HVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 123
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 124 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 179
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRG--TVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G +G VR+ S + K+ + D+WS +L E
Sbjct: 180 YYRK----------------GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIAT- 222
Query: 229 QHPLVKAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 275
L + P +R+ +K D L+ L M ++
Sbjct: 223 ---LAEQPYQGLSNEQVLRFVMEGGLLDKPDNCPDMLFELMRMCWQY 266
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENL----LLDADMNIKIADFGFSNEFTFGNKLDTF--CG 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S AP G K G D+WSL +L V+ P
Sbjct: 175 SPPYAAPELFQG--------------KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 41/199 (20%), Positives = 79/199 (39%), Gaps = 32/199 (16%)
Query: 16 RWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVLKKLQ------ 68
R+ ++RK D+V +VA+K V + + + E+ +L+++
Sbjct: 20 RYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTK 79
Query: 69 ----GKEHVCRFIGCGRNDRFNY---------VVMQLQGKNLAELRRAQPRGAFSLSTTL 115
G H+ + + D FN+ +V ++ G+NL L + L
Sbjct: 80 EDSMGANHILKLL-----DHFNHKGPNGVHVVMVFEVLGENLLALIKKYEHRGIPLIYVK 134
Query: 116 RLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSR--RVYMLDFGLARQYTTSSEL 172
++ Q+L ++ +H G +H DIKP N + + ++ + D G A Y
Sbjct: 135 QISKQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNACWYDEHYT- 193
Query: 173 RNFNTTSSGEVRAPRAAAG 191
N+ + E R+P G
Sbjct: 194 ---NSIQTREYRSPEVLLG 209
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.8 bits (81), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 117 YMVMEYVAGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 173
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 174 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 224
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 118
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 119 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 172
Query: 157 MLDFGLARQYTTSSELRNFNTTS 179
+ DFGLA + + S F S
Sbjct: 173 IGDFGLATEKSRWSGSHQFEQLS 195
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/113 (25%), Positives = 44/113 (38%), Gaps = 20/113 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L F
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENL----LLDADMNIKIADFGFSNEFTFGNKLDEF--CG 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
S AP G K G D+WSL +L V+ P
Sbjct: 175 SPPYAAPELFQG--------------KKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 37/76 (48%), Gaps = 6/76 (7%)
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNF 175
RL QIL A++ H +HRD+KP N + H + ++ DFGL+ + LR
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLD--AHMNAKI--ADFGLSNMMSDGEFLR-- 168
Query: 176 NTTSSGEVRAPRAAAG 191
++ S AP +G
Sbjct: 169 DSCGSPNYAAPEVISG 184
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 35.8 bits (81), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 90
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 91 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 144
Query: 157 MLDFGLARQYTTSSELRNFNTTS 179
+ DFGLA + + S F S
Sbjct: 145 IGDFGLATEKSRWSGSHQFEQLS 167
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 109 FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT- 167
F+LS R+ +L + IH LHRD+K +N I R + + DFGLAR ++
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR----DGVLKLADFGLARAFSL 177
Query: 168 --TSSELRNFNTTSSGEVRAPRAAAGFR 193
S R N + R P G R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 35.8 bits (81), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 109 FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT- 167
F+LS R+ +L + IH LHRD+K +N I R + + DFGLAR ++
Sbjct: 121 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR----DGVLKLADFGLARAFSL 176
Query: 168 --TSSELRNFNTTSSGEVRAPRAAAGFR 193
S R N + R P G R
Sbjct: 177 AKNSQPNRYXNRVVTLWYRPPELLLGER 204
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 109 FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT- 167
F+LS R+ +L + IH LHRD+K +N I R + + DFGLAR ++
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR----DGVLKLADFGLARAFSL 177
Query: 168 --TSSELRNFNTTSSGEVRAPRAAAGFR 193
S R N + R P G R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 35.8 bits (81), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 64/143 (44%), Gaps = 12/143 (8%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 52 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 110
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 111 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 164
Query: 157 MLDFGLARQYTTSSELRNFNTTS 179
+ DFGLA + + S F S
Sbjct: 165 IGDFGLATEKSRWSGSHQFEQLS 187
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 53/119 (44%), Gaps = 15/119 (12%)
Query: 87 YVVMQL--QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y+VM+ G+ + LRR G F QI+ E +HS+ ++RD+KP N
Sbjct: 138 YMVMEYVAGGEMFSHLRRI---GRFXEPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLL 194
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGFRGTVRYASI 201
I + + + + DFG A++ R + + E AP + G+ V + ++
Sbjct: 195 IDQQGY----IQVTDFGFAKRVKG----RTWXLCGTPEYLAPEIILSKGYNKAVDWWAL 245
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 30/119 (25%), Positives = 56/119 (47%), Gaps = 11/119 (9%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRL 117
EVAVLK+L ++ + + R Y+VM++ G+ E+ Q + ++
Sbjct: 71 EVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK- 128
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR--VYMLDFGLARQYTTSSELRN 174
Q+L +H +HRD+KP N L+ SR + ++DFGL+ + +++
Sbjct: 129 --QVLSGTTYLHKHNIVHRDLKPENL---LLESKSRDALIKIVDFGLSAHFEVGGKMKE 182
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 35.8 bits (81), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 4/49 (8%)
Query: 128 IHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
IH G +HRD+KP+N L + V + DFGLAR + ++ N
Sbjct: 147 IHESGIIHRDLKPANC----LLNQDCSVKICDFGLARTINSDKDIHIVN 191
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 35.8 bits (81), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 56/118 (47%), Gaps = 11/118 (9%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQ--GKNLAELRRAQPRGAFSLSTTLRL 117
EVAVLK+L ++ + + R Y+VM++ G+ E+ Q + ++
Sbjct: 54 EVAVLKQLD-HPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK- 111
Query: 118 GIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR--VYMLDFGLARQYTTSSELR 173
Q+L +H +HRD+KP N L+ SR + ++DFGL+ + +++
Sbjct: 112 --QVLSGTTYLHKHNIVHRDLKPENL---LLESKSRDALIKIVDFGLSAHFEVGGKMK 164
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 35.8 bits (81), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 72/178 (40%), Gaps = 28/178 (15%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQPR-------GAFS 110
E +V+K+ HV R +G + V+M+L +G + LR +P S
Sbjct: 100 EASVMKEFNC-HHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPS 158
Query: 111 LSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
LS +++ +I + +++ F+HRD+ N + V + DFG+ R +
Sbjct: 159 LSKMIQMAGEIADGMAYLNANKFVHRDLAARNCMVAE----DFTVKIGDFGMTRDIYETD 214
Query: 171 ELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNI 228
R G+ P VR+ S + K+ + D+WS +L E +
Sbjct: 215 YYRK-----GGKGLLP---------VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATL 258
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 22/114 (19%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENL----LLDADXNIKIADFGFSNEFTFGNKL------- 169
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRHDDLWSLFYMLVEFVNIQHPL 232
F G YA+ + K+ G D+WSL +L V+ P
Sbjct: 170 ----------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 30/127 (23%), Positives = 47/127 (37%), Gaps = 20/127 (15%)
Query: 107 GAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQY 166
G F T +I A+ +H G ++RD+KP N + H V + DFGL ++
Sbjct: 116 GIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIMLNHQGH----VKLTDFGLCKE- 170
Query: 167 TTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFV 226
+ G V F GT+ Y + R D WSL ++ + +
Sbjct: 171 ----------SIHDGTV-----THXFCGTIEYMAPEILMRSGHNRAVDWWSLGALMYDML 215
Query: 227 NIQHPLV 233
P
Sbjct: 216 TGAPPFT 222
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 35.4 bits (80), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 58/149 (38%), Gaps = 25/149 (16%)
Query: 87 YVVMQ-LQGKNL-AELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
Y++++ L G L +L R G F T +I A+ +H G ++RD+KP N
Sbjct: 97 YLILEYLSGGELFMQLER---EGIFMEDTACFYLAEISMALGHLHQKGIIYRDLKPENIM 153
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAH 204
+ H V + DFGL ++ + G V F GT+ Y +
Sbjct: 154 LNHQGH----VKLTDFGLCKE-----------SIHDGTV-----THTFCGTIEYMAPEIL 193
Query: 205 KNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
R D WSL ++ + + P
Sbjct: 194 MRSGHNRAVDWWSLGALMYDMLTGAPPFT 222
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 35.4 bits (80), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 157
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 158 GWS-------------------VHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLG 198
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 199 VLCYEFLVGKPPF 211
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.4 bits (80), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 26/99 (26%), Positives = 40/99 (40%), Gaps = 17/99 (17%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QIL + +H+ H D+KP N + + ++DFGLA + E +N T
Sbjct: 123 QILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTP 182
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
E AP V Y + +G D+WS+
Sbjct: 183 --EFVAPE-------IVNY--------EPLGLEADMWSI 204
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 35.4 bits (80), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 7/88 (7%)
Query: 109 FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT- 167
F+LS R+ +L + IH LHRD+K +N I R + + DFGLAR ++
Sbjct: 122 FTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITR----DGVLKLADFGLARAFSL 177
Query: 168 --TSSELRNFNTTSSGEVRAPRAAAGFR 193
S R N + R P G R
Sbjct: 178 AKNSQPNRYXNRVVTLWYRPPELLLGER 205
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 35.0 bits (79), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 95
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 96 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 149
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 150 IGDFGLA 156
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 35.0 bits (79), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 46/114 (40%), Gaps = 22/114 (19%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ A++ H +HRD+K N L + + DFG + ++T ++L
Sbjct: 121 QIVSAVQYCHQKFIVHRDLKAENL----LLDADMNIKIADFGFSNEFTFGNKL------- 169
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRHDDLWSLFYMLVEFVNIQHPL 232
F G YA+ + K+ G D+WSL +L V+ P
Sbjct: 170 ----------DAFCGAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 37 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 95
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 96 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 149
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 150 IGDFGLA 156
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 35.0 bits (79), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 34 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 92
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 93 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 146
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 147 IGDFGLA 153
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 60 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 118
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 119 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 172
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 173 IGDFGLA 179
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 35.0 bits (79), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 90
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 91 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 144
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 145 IGDFGLA 151
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 35.0 bits (79), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 36/76 (47%), Gaps = 6/76 (7%)
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNF 175
RL QIL A++ H +HRD+KP N + H + ++ DFGL+ + LR
Sbjct: 115 RLFQQILSAVDYCHRHMVVHRDLKPENVLLD--AHMNAKI--ADFGLSNMMSDGEFLR-- 168
Query: 176 NTTSSGEVRAPRAAAG 191
+ S AP +G
Sbjct: 169 TSCGSPNYAAPEVISG 184
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 35.0 bits (79), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 59 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTKPQLAIVTQWCEGSSL 117
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 118 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 171
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 172 IGDFGLA 178
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 35.0 bits (79), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 29/151 (19%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 114 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 169
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 170 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 210
Query: 220 YMLVEFVNIQHPLVKAPRAAAGFRGTVRYAS 250
+ EF+ + K P A ++ T + S
Sbjct: 211 VLCYEFL-----VGKPPFEANTYQETYKRIS 236
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 35.0 bits (79), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/188 (21%), Positives = 74/188 (39%), Gaps = 24/188 (12%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGC-------GRNDRFNYVVMQLQGK-NLAELRRAQP 105
++ +K E+ +LKK ++ + G G +D+ ++VM+ G ++ +L +
Sbjct: 64 EEEIKQEINMLKKYSHHRNIATYYGAFIKKNPPGMDDQL-WLVMEFCGAGSVTDLIKNTK 122
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQ 165
+ +IL+ + +H +HRDIK N L + V ++DFG++ Q
Sbjct: 123 GNTLKEEWIAYICREILRGLSHLHQHKVIHRDIKGQNV----LLTENAEVKLVDFGVSAQ 178
Query: 166 YTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 225
+ RN + AP A + + + DLWSL +E
Sbjct: 179 LDRTVGRRN-TFIGTPYWMAPEVIA----------CDENPDATYDFKSDLWSLGITAIEM 227
Query: 226 VNIQHPLV 233
PL
Sbjct: 228 AEGAPPLC 235
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
++M+ ++G L R Q RG AF+ + I AI+ +HS HRD+KP N
Sbjct: 84 IIMECMEGGEL--FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN-- 139
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSS 170
L +TS+ + + DFG A++ T ++
Sbjct: 140 ---LLYTSKEKDAVLKLTDFGFAKETTQNA 166
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 34.7 bits (78), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 34.7 bits (78), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 153
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 154 GWS-------------------VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 195 VLCYEFLVGKPPF 207
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 34.7 bits (78), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 69/152 (45%), Gaps = 33/152 (21%)
Query: 35 HDLVTKENVALKVESARQPKQVLKM----EVAVLKKLQGKE-HVCRFIGCGRNDRFNYVV 89
HD E+++ +E+ RQ ++ M + L+ + KE ++C + R N V
Sbjct: 40 HD--PDEDISQTIENVRQEAKLFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRV- 96
Query: 90 MQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHS---VGFLHRDIKPSNFSI- 145
L GK R P + +QI + + +H V +HRD+K SN I
Sbjct: 97 --LSGK------RIPP------DILVNWAVQIARGMNYLHDEAIVPIIHRDLKSSNILIL 142
Query: 146 -----GRLQHTSRRVYMLDFGLARQYTTSSEL 172
G L +++ + + DFGLAR++ ++++
Sbjct: 143 QKVENGDL--SNKILKITDFGLAREWHRTTKM 172
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 157
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 158 GWS-------------------VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 199 VLCYEFLVGKPPF 211
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 34.7 bits (78), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 46/90 (51%), Gaps = 14/90 (15%)
Query: 88 VVMQ-LQGKNLAELRRAQPRG--AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
++M+ ++G L R Q RG AF+ + I AI+ +HS HRD+KP N
Sbjct: 103 IIMECMEGGEL--FSRIQERGDQAFTEREAAEIMRDIGTAIQFLHSHNIAHRDVKPEN-- 158
Query: 145 IGRLQHTSRR----VYMLDFGLARQYTTSS 170
L +TS+ + + DFG A++ T ++
Sbjct: 159 ---LLYTSKEKDAVLKLTDFGFAKETTQNA 185
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 34.7 bits (78), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 42 NVALKVESARQPK----QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
+VA+K+ + P Q K EV VL+K + ++ F+G + V +G +L
Sbjct: 32 DVAVKMLNVTAPTPQQLQAFKNEVGVLRKTR-HVNILLFMGYSTAPQLAIVTQWCEGSSL 90
Query: 98 AE-LRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVY 156
L + + F + + + Q + ++ +H+ +HRD+K +N + H V
Sbjct: 91 YHHLHIIETK--FEMIKLIDIARQTAQGMDYLHAKSIIHRDLKSNNIFL----HEDLTVK 144
Query: 157 MLDFGLA 163
+ DFGLA
Sbjct: 145 IGDFGLA 151
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 155
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 156 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 197 VLCYEFLVGKPPF 209
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 34.7 bits (78), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 102 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 157
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 158 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 198
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 199 VLCYEFLVGKPPF 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 34.7 bits (78), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 178
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 179 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 220 VLCYEFLVGKPPF 232
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 46/232 (19%), Positives = 88/232 (37%), Gaps = 21/232 (9%)
Query: 8 QQGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALKV-ESARQPKQVLKMEVAVLKK 66
++G ++ + VIRK + K+ A+KV + ++ + K+E +LKK
Sbjct: 28 KKGMLLNNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKK 87
Query: 67 LQGKEHVCRFIGCGRNDRFNY-----VVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQI 121
+Q + + +F Y ++ + G +L E+ F + I+I
Sbjct: 88 IQNDDIN-NNNIVKYHGKFMYYDHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEI 146
Query: 122 LKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSG 181
LKA+ + + H D+KP N + + R+ T +++ + T S+G
Sbjct: 147 LKALNYLRKMSLTHTDLKPENILLDDPYFEKSLI------TVRRVTDGKKIQIYRTKSTG 200
Query: 182 EVRAPRAAAGFRGTVRYASINAHK--------NKEMGRHDDLWSLFYMLVEF 225
A F+ + IN + N D+WS +L E
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAEL 252
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 34.7 bits (78), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 36/168 (21%), Positives = 63/168 (37%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++KKL+ + V + + +G L L+ + R A L + +
Sbjct: 54 EAQIMKKLKHDKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKDGEGR-ALKLPNLVDMAA 112
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+ + I + ++HRD++ +N +G + DFGLAR +
Sbjct: 113 QVAAGMAYIERMNYIHRDLRSANILVG----NGLICKIADFGLARLIEDNEXTARQGAKF 168
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E V
Sbjct: 169 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELVT 201
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 34.3 bits (77), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 50/132 (37%), Gaps = 22/132 (16%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 153
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFY 220
G + +S TT S GT+ Y + + DLWSL
Sbjct: 154 GWSCHAPSSR-----RTTLS-------------GTLDYLPPEMIEGRMHDEKVDLWSLGV 195
Query: 221 MLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 196 LCYEFLVGKPPF 207
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 22/146 (15%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V+ L G +L + Q F LS +I+ ++ +HS G ++RD+K N +
Sbjct: 95 FVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 152
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ H + + DFG+ ++ N F GT Y +
Sbjct: 153 KDGH----IKIADFGMCKENMLGDAKTN----------------XFCGTPDYIAPEILLG 192
Query: 207 KEMGRHDDLWSLFYMLVEFVNIQHPL 232
++ D WS +L E + Q P
Sbjct: 193 QKYNHSVDWWSFGVLLYEMLIGQSPF 218
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 34.3 bits (77), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 34.3 bits (77), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 36/151 (23%), Positives = 56/151 (37%), Gaps = 29/151 (19%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 123 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 178
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 179 GWS-------------------VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 219
Query: 220 YMLVEFVNIQHPLVKAPRAAAGFRGTVRYAS 250
+ EF+ + K P A ++ T + S
Sbjct: 220 VLCYEFL-----VGKPPFEANTYQETYKRIS 245
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 34.3 bits (77), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 32/146 (21%), Positives = 56/146 (38%), Gaps = 22/146 (15%)
Query: 87 YVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+V+ L G +L + Q F LS +I+ ++ +HS G ++RD+K N +
Sbjct: 96 FVMEYLNGGDL--MYHIQSCHKFDLSRATFYAAEIILGLQFLHSKGIVYRDLKLDNILLD 153
Query: 147 RLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKN 206
+ H + + DFG+ ++ N F GT Y +
Sbjct: 154 KDGH----IKIADFGMCKENMLGDAKTN----------------EFCGTPDYIAPEILLG 193
Query: 207 KEMGRHDDLWSLFYMLVEFVNIQHPL 232
++ D WS +L E + Q P
Sbjct: 194 QKYNHSVDWWSFGVLLYEMLIGQSPF 219
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 34.3 bits (77), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 99 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 154
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 155 GWS-------------------VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 196 VLCYEFLVGKPPF 208
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 34.3 bits (77), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 155
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 156 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 197 VLCYEFLVGKPPF 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 24/114 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
++ A+ HS +HRDIKP N +G ++ + + DFG +
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADFGWS---------------- 160
Query: 180 SGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
V AP + GT+ Y + + DLWSL + EF+ + P
Sbjct: 161 ---VHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 96 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 151
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 152 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 192
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 193 VLCYEFLVGKPPF 205
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 38/99 (38%), Gaps = 22/99 (22%)
Query: 133 FLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGF 192
+HRD+KPSN L ++ + + DFG++ Q A F
Sbjct: 129 IMHRDVKPSNI----LVNSRGEIKLCDFGVSGQLID------------------EMANEF 166
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
GT Y S + D+WS+ LVE ++P
Sbjct: 167 VGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 33.9 bits (76), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 65/147 (44%), Gaps = 17/147 (11%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGC--GRNDRFNYVVMQ--LQGKNLAELRRAQPRGAF 109
K +K E++++ +L H + I D++ V++ L G L + R A
Sbjct: 92 KYTVKNEISIMNQL----HHPKLINLHDAFEDKYEMVLILEFLSGGELFD-RIAAEDYKM 146
Query: 110 SLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTS 169
S + + Q + ++ +H +H DIKP N + +S V ++DFGLA +
Sbjct: 147 SEAEVINYMRQACEGLKHMHEHSIVHLDIKPENIMCETKKASS--VKIIDFGLATKLNPD 204
Query: 170 SELRNFNTTSSGEVRAP----RAAAGF 192
++ TT++ E AP R GF
Sbjct: 205 EIVK--VTTATAEFAAPEIVDREPVGF 229
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 101 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 156
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 157 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 198 VLCYEFLVGKPPF 210
>pdb|4AZW|A Chain A, Crystal Structure Of Monomeric Wbdd
Length = 471
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 45 LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRA 103
L E +++ K L E+ L + + G N + ++VM+ L G+ L+++ A
Sbjct: 276 LTAEESQRNKHELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA 335
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFG 161
+ LG +L+++ ++ GF H D++P N + QH ++DFG
Sbjct: 336 ----GEEIDREKILG-SLLRSLAALEKKGFWHDDVRPWNVMVDARQHAR----LIDFG 384
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 40 KENVALK---VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
KE VA+K +E + L E+ + + V + D V+ L G +
Sbjct: 35 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 94
Query: 97 LAEL------RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
+ ++ + G ST + ++L+ +E +H G +HRD+K N +G
Sbjct: 95 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE--- 151
Query: 151 TSRRVYMLDFGLARQYTTSSEL 172
V + DFG++ T ++
Sbjct: 152 -DGSVQIADFGVSAFLATGGDI 172
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 94 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 149
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 150 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 190
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 191 VLCYEFLVGKPPF 203
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 98 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 153
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAG-FRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 154 GWS-------------------VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 194
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 195 VLCYEFLVGKPPF 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 33.9 bits (76), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 31/142 (21%), Positives = 58/142 (40%), Gaps = 13/142 (9%)
Query: 40 KENVALK---VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKN 96
KE VA+K +E + L E+ + + V + D V+ L G +
Sbjct: 40 KEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGS 99
Query: 97 LAEL------RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQH 150
+ ++ + G ST + ++L+ +E +H G +HRD+K N +G
Sbjct: 100 VLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGE--- 156
Query: 151 TSRRVYMLDFGLARQYTTSSEL 172
V + DFG++ T ++
Sbjct: 157 -DGSVQIADFGVSAFLATGGDI 177
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 45/114 (39%), Gaps = 24/114 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
++ A+ HS +HRDIKP N +G ++ + + DFG +
Sbjct: 121 ELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADFGWS---------------- 160
Query: 180 SGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPL 232
V AP + GT+ Y + + DLWSL + EF+ + P
Sbjct: 161 ---VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 25/117 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+L+A+ +HS +HRD+K N L + + DFG++ + + + R+
Sbjct: 117 QMLEALNFLHSKRIIHRDLKAGNV----LMTLEGDIRLADFGVSAKNLKTLQKRD----- 167
Query: 180 SGEVRAPRAAAGFRGTVRYAS-----INAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K+ D+WSL L+E I+ P
Sbjct: 168 -----------SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 46/93 (49%), Gaps = 7/93 (7%)
Query: 71 EHVCRFIG-CGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIH 129
E+V F+G C + +G+ L + R + ++ T ++ +I+K + +H
Sbjct: 89 ENVVLFMGACMSPPHLAIITSLCKGRTLYSVVR-DAKIVLDVNKTRQIAQEIVKGMGYLH 147
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGL 162
+ G LH+D+K N + + + +V + DFGL
Sbjct: 148 AKGILHKDLKSKN-----VFYDNGKVVITDFGL 175
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 33.9 bits (76), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 155
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 156 GWS-------------------VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 197 VLCYEFLVGKPPF 209
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 99 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 152
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 153 LVKIGDFGLMRALPQNDD 170
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 40/189 (21%), Positives = 78/189 (41%), Gaps = 24/189 (12%)
Query: 51 RQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFS 110
++ KQ+L M++ V+ + ++ +F G + ++ M+L + + +
Sbjct: 62 KEQKQLL-MDLDVVMRSSDCPYIVQFYGALFREGDCWICMELMSTSFDKFYKYVYSVLDD 120
Query: 111 LSTTLRLGIQILKAIESIH----SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQY 166
+ LG L +++++ ++ +HRDIKPSN + R S + + DFG++ Q
Sbjct: 121 VIPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILLDR----SGNIKLCDFGISGQL 176
Query: 167 TTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKE-MGRHDDLWSLFYMLVEF 225
S A AG R + I+ +++ D+WSL L E
Sbjct: 177 VDSI--------------AKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYEL 222
Query: 226 VNIQHPLVK 234
+ P K
Sbjct: 223 ATGRFPYPK 231
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 165
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 166 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 97 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 152
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 153 GWS-------------------VHAPSSRRXXLCGTLDYLPPEMIEGRMHDEKVDLWSLG 193
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 194 VLCYEFLVGKPPF 206
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 70/181 (38%), Gaps = 24/181 (13%)
Query: 55 QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK-NLAELRRAQPRGAFSLST 113
Q E ++K LQ + V + R + Y++ + K +L + ++ G L
Sbjct: 53 QAFLEEANLMKTLQHDKLVRLYAVVTREEPI-YIITEYMAKGSLLDFLKSDEGGKVLLPK 111
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
+ QI + + I ++HRD++ +N L S + DFGLAR
Sbjct: 112 LIDFSAQIAEGMAYIERKNYIHRDLRAANV----LVSESLMCKIADFGLAR--------- 158
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS---LFYMLVEFVNIQH 230
E A R A F +++ + A D+WS L Y +V + I +
Sbjct: 159 ---VIEDNEYTA-REGAKF--PIKWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIPY 212
Query: 231 P 231
P
Sbjct: 213 P 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 47/117 (40%), Gaps = 25/117 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+L+A+ +HS +HRD+K N L + + DFG++ + + + R+
Sbjct: 125 QMLEALNFLHSKRIIHRDLKAGNV----LMTLEGDIRLADFGVSAKNLKTLQKRD----- 175
Query: 180 SGEVRAPRAAAGFRGTVRYAS-----INAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K+ D+WSL L+E I+ P
Sbjct: 176 -----------SFIGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 33.9 bits (76), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 95 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 148
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 149 LVKIGDFGLMRALPQNDD 166
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 33.5 bits (75), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 95 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 148
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 149 LVKIGDFGLMRALPQNDD 166
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 23/182 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 165
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 166 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
Query: 237 RA 238
Sbjct: 218 EV 219
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 32/133 (24%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIADF 155
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 156 GWS-------------------VHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 197 VLCYEFLVGKPPF 209
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 59 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 117
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 118 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 166
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 167 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 218
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 99 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 152
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 153 LVKIGDFGLMRALPQNDD 170
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 105 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 158
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 159 LVKIGDFGLMRALPQNDD 176
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 60 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 118
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 119 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 167
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 168 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 219
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 105 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 158
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 159 LVKIGDFGLMRALPQNDD 176
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/182 (19%), Positives = 71/182 (39%), Gaps = 23/182 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 67 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 125
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 126 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 175 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 226
Query: 237 RA 238
Sbjct: 227 EV 228
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 36/78 (46%), Gaps = 6/78 (7%)
Query: 94 GKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSR 153
G L LR+ Q G F L T R +Q+ + + + S F+HRD+ N L T
Sbjct: 95 GSLLDRLRKHQ--GHFLLGTLSRYAVQVAEGMGYLESKRFIHRDLAARNL----LLATRD 148
Query: 154 RVYMLDFGLARQYTTSSE 171
V + DFGL R + +
Sbjct: 149 LVKIGDFGLMRALPQNDD 166
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/114 (25%), Positives = 50/114 (43%), Gaps = 28/114 (24%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRR---VYMLDFGLARQYTTSSELRNFN 176
Q+ +A++ +HS H DI+P N + + +RR + +++FG ARQ R
Sbjct: 110 QVCEALQFLHSHNIGHFDIRPEN-----IIYQTRRSSTIKIIEFGQARQLKPGDNFRLLF 164
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS---LFYMLVEFVN 227
T AP Y + H++ + D+WS L Y+L+ +N
Sbjct: 165 T-------AP----------EYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGIN 201
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 33.5 bits (75), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 66 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 124
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 125 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 173
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 174 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 225
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 44/213 (20%), Positives = 77/213 (36%), Gaps = 62/213 (29%)
Query: 41 ENVALKVESARQPKQVLKM-----------EVAVLKKLQGKEHVCRFIGCGRNDRFNYVV 89
+NV E+AR QVL+ V +L+ + H+C +V
Sbjct: 49 KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC-------------IV 95
Query: 90 MQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQ 149
+L G + + + F L ++ QI K++ +HS H D+KP N +
Sbjct: 96 FELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPENILFVQSD 155
Query: 150 HT---------------SRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRA--AAGF 192
+T + + ++DFG A T + + S+ RAP A G+
Sbjct: 156 YTEAYNPKIKRDERTLINPDIKVVDFGSA----TYDDEHHSTLVSTRHYRAPEVILALGW 211
Query: 193 RGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 225
D+WS+ +L+E+
Sbjct: 212 SQPC-----------------DVWSIGCILIEY 227
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 33.5 bits (75), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 46/117 (39%), Gaps = 25/117 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q L A+ +H +HRD+K N L + + DFG++ + T + + R+
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNI----LFTLDGDIKLADFGVSAKNTRTIQRRD----- 193
Query: 180 SGEVRAPRAAAGFRGTVRYAS-----INAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K++ D+WSL L+E I+ P
Sbjct: 194 -----------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 66/171 (38%), Gaps = 14/171 (8%)
Query: 52 QPKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFS 110
+P V E VLKKL K V F I R ++M+ +P A+
Sbjct: 49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 111 LSTTLRLGI--QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYML-DFGLARQYT 167
L + L + ++ + + G +HR+IKP N + + + VY L DFG AR+
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNI-MRVIGEDGQSVYKLTDFGAARELE 167
Query: 168 TSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
+ + T E P A + K+ G DLWS+
Sbjct: 168 DDEQFVSLYGTE--EYLHP-------DMYERAVLRKDHQKKYGATVDLWSI 209
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEXXSVHN 192
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 193 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 64 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEXT 171
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 172 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 223
>pdb|4AZS|A Chain A, High Resolution (2.2 A) Crystal Structure Of Wbdd.
pdb|4AZT|A Chain A, Co-Crystal Structure Of Wbdd And Kinase Inhibitor
Ly294002.
pdb|4AZV|A Chain A, Co-crystal Structure Of Wbdd And Kinase Inhibitor
Gw435821x
Length = 569
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 45 LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRA 103
L E +++ K L E+ L + + G N + ++VM+ L G+ L+++ A
Sbjct: 276 LTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA 335
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFG 161
+ LG +L+++ ++ GF H D++P N + QH ++DFG
Sbjct: 336 ----GEEIDREKILG-SLLRSLAALEKQGFWHDDVRPWNVMVDARQHAR----LIDFG 384
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEYT 165
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 166 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 33.5 bits (75), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 53 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 111
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 112 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEYT 160
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 161 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 212
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 30/142 (21%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGKN-LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+VM+ K L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 88 YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 147
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 148 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 195
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 196 -------SDVWSFGILLTELTT 210
>pdb|4AX8|A Chain A, Medium Resolution Structure Of The Bifunctional Kinase-
Methyltransferase Wbdd
Length = 569
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 28/118 (23%), Positives = 54/118 (45%), Gaps = 10/118 (8%)
Query: 45 LKVESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQ-LQGKNLAELRRA 103
L E +++ K L E+ L + + G N + ++VM+ L G+ L+++ A
Sbjct: 276 LTAEESQRNKYELHNEIKFLTQPPAGFDAPAVLAHGENAQSGWLVMEKLPGRLLSDMLAA 335
Query: 104 QPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFG 161
+ LG +L+++ ++ GF H D++P N + QH ++DFG
Sbjct: 336 ----GEEIDREKILG-SLLRSLAALEKQGFWHDDVRPWNVMVDARQHAR----LIDFG 384
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 33.1 bits (74), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 35/76 (46%), Gaps = 6/76 (7%)
Query: 116 RLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNF 175
RL QIL ++ H +HRD+KP N + H + ++ DFGL+ + LR
Sbjct: 120 RLFQQILSGVDYCHRHMVVHRDLKPENVLLD--AHMNAKI--ADFGLSNMMSDGEFLR-- 173
Query: 176 NTTSSGEVRAPRAAAG 191
+ S AP +G
Sbjct: 174 XSCGSPNYAAPEVISG 189
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/147 (22%), Positives = 52/147 (35%), Gaps = 16/147 (10%)
Query: 85 FNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFS 144
N + L+G +L +L + G L Q L+ +E +H+ LH D+K N
Sbjct: 141 VNIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV- 197
Query: 145 IGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAH 204
L R + DFG A ++ T GT + +
Sbjct: 198 --LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-----------IPGTETHMAPEVV 244
Query: 205 KNKEMGRHDDLWSLFYMLVEFVNIQHP 231
K D+WS M++ +N HP
Sbjct: 245 MGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 16/149 (10%)
Query: 86 NYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
N + L+G +L +L + G L Q L+ +E +H+ LH D+K N
Sbjct: 126 NIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV-- 181
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L R + DFG A ++ T GT + +
Sbjct: 182 -LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-----------IPGTETHMAPEVVM 229
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQHPLVK 234
K D+WS M++ +N HP +
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 258
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 64 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 122
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 123 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEYT 171
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 172 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 223
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 33.1 bits (74), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 63 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 121
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 122 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEYT 170
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 171 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 222
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 35 HDLVTKEN---VALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVV 89
H+L+ +++ VA+K E++ +Q + E +L LQ +H+ RF G R +V
Sbjct: 63 HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMV 121
Query: 90 MQL---------------QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFL 134
+ K LA P G L L + Q+ + + + F+
Sbjct: 122 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQVAAGMVYLAGLHFV 180
Query: 135 HRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
HRD+ N +G+ V + DFG++R ++ R
Sbjct: 181 HRDLATRNCLVGQ----GLVVKIGDFGMSRDIYSTDYYR 215
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 33.1 bits (74), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR-----AQPRG 107
++ + ME+++ + L +HV F G ++ F +VV++L + ++L EL + +P
Sbjct: 59 REKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 117
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ L QI+ + +H +HRD+K N + V + DFGLA +
Sbjct: 118 RYYLR-------QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVE 166
Query: 168 TSSE 171
E
Sbjct: 167 YDGE 170
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/111 (23%), Positives = 47/111 (42%), Gaps = 6/111 (5%)
Query: 55 QVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGK-NLAELRRAQPRGAFSLST 113
Q E ++K LQ + + R + Y++ + K +L + ++ G L
Sbjct: 52 QAFLEEANLMKTLQ-HDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLLPK 110
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
+ QI + + I ++HRD++ +N L S + DFGLAR
Sbjct: 111 LIDFSAQIAEGMAYIERKNYIHRDLRAANV----LVSESLMCKIADFGLAR 157
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 36/180 (20%), Positives = 69/180 (38%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 58 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 116
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR
Sbjct: 117 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR------------LIE 160
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
E A R A F +++ + A D+WS +L E V I +P + P
Sbjct: 161 DAEXTA-REGAKF--PIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 217
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/92 (23%), Positives = 46/92 (50%), Gaps = 8/92 (8%)
Query: 114 TLRLGI-QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
T++L I +++ A++ + + +HRD+KP N + H V++ DF +A +++
Sbjct: 116 TVKLFICELVMALDYLQNQRIIHRDMKPDNILLDEHGH----VHITDFNIAAMLPRETQI 171
Query: 173 RNFNTTS---SGEVRAPRAAAGFRGTVRYASI 201
T + E+ + R AG+ V + S+
Sbjct: 172 TTMAGTKPYMAPEMFSSRKGAGYSFAVDWWSL 203
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 26/112 (23%), Positives = 43/112 (38%), Gaps = 14/112 (12%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q L A+ +H +HRD+K N L + + DFG++ + T + R +
Sbjct: 116 QTLDALNYLHDNKIIHRDLKAGNI----LFTLDGDIKLADFGVSAKNTRTXIQRRDSFIG 171
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
+ AP K++ D+WSL L+E I+ P
Sbjct: 172 TPYWMAPEVVM----------CETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 16/149 (10%)
Query: 86 NYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
N + L+G +L +L + G L Q L+ +E +H+ LH D+K N
Sbjct: 140 NIFMELLEGGSLGQLIKQM--GCLPEDRALYYLGQALEGLEYLHTRRILHGDVKADNV-- 195
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L R + DFG A ++ T GT + +
Sbjct: 196 -LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDY-----------IPGTETHMAPEVVM 243
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQHPLVK 234
K D+WS M++ +N HP +
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNGCHPWTQ 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 35/180 (19%), Positives = 71/180 (39%), Gaps = 23/180 (12%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E ++K+LQ + + R + + ++ +L + + +++ L +
Sbjct: 68 EANLMKQLQ-HQRLVRLYAVVTQEPIYIITEYMENGSLVDFLKTPSGIKLTINKLLDMAA 126
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + I ++HRD++ +N L + + DFGLAR L N +
Sbjct: 127 QIAEGMAFIEERNYIHRDLRAANI----LVSDTLSCKIADFGLAR-------LIEDNEYT 175
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
+ E G + +++ + A D+WS +L E V I +P + P
Sbjct: 176 ARE--------GAKFPIKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIPYPGMTNP 227
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR-----AQPRG 107
++ + ME+++ + L +HV F G ++ F +VV++L + ++L EL + +P
Sbjct: 61 REKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 119
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ L QI+ + +H +HRD+K N + V + DFGLA +
Sbjct: 120 RYYLR-------QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVE 168
Query: 168 TSSE 171
E
Sbjct: 169 YDGE 172
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 33.1 bits (74), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 16/149 (10%)
Query: 86 NYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
N + L+G +L +L + Q G L Q L+ +E +HS LH D+K N
Sbjct: 142 NIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV-- 197
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L + DFG A ++ T GT + +
Sbjct: 198 -LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY-----------IPGTETHMAPEVVL 245
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQHPLVK 234
+ D+WS M++ +N HP +
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 274
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR-----AQPRG 107
++ + ME+++ + L +HV F G ++ F +VV++L + ++L EL + +P
Sbjct: 61 REKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 119
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ L QI+ + +H +HRD+K N + V + DFGLA +
Sbjct: 120 RYYLR-------QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVE 168
Query: 168 TSSE 171
E
Sbjct: 169 YDGE 172
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 6 LLQQGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVL 64
L++ G + R+ VIRK D+ K+ VA+K V+SA + E+ +L
Sbjct: 12 LVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLL 71
Query: 65 KKLQ-------GKEHVCRFIG----CGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLST 113
K ++ +E V + + G N +V ++ G +L + L
Sbjct: 72 KSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPC 131
Query: 114 TLRLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSRRV 155
++ Q+L+ ++ +H+ +H DIKP N + + RR+
Sbjct: 132 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 174
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 130 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 185
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 186 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 224
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 79 HVCRLLGICLTSTVQLIMQLMPFGXLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 138 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 179
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWS 205
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 135 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 190
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 191 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 229
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR-----AQPRG 107
++ + ME+++ + L +HV F G ++ F +VV++L + ++L EL + +P
Sbjct: 83 REKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 141
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ L QI+ + +H +HRD+K N + V + DFGLA +
Sbjct: 142 RYYLR-------QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVE 190
Query: 168 TSSE 171
E
Sbjct: 191 YDGE 194
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 193
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 194 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 136 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 191
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 192 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR-----AQPRG 107
++ + ME+++ + L +HV F G ++ F +VV++L + ++L EL + +P
Sbjct: 65 REKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 123
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ L QI+ + +H +HRD+K N + V + DFGLA +
Sbjct: 124 RYYLR-------QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVE 172
Query: 168 TSSE 171
E
Sbjct: 173 YDGE 176
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
+ L+ +E +H LHRD+KP+N L + + + DFGLA+ + + +
Sbjct: 119 LMTLQGLEYLHQHWILHRDLKPNNL----LLDENGVLKLADFGLAKSFGSPN 166
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 157 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 212
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 213 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 251
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 24/127 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SNGELKIADF 156
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 157 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 220 YMLVEFV 226
+ EF+
Sbjct: 198 VLCYEFL 204
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 82 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 141 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 182
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWS 208
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 137 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 192
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 193 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 231
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 39/81 (48%), Gaps = 7/81 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQ---LQGKNLAELRRAQPR--GAFSLSTTLRLGIQILKAIE 126
HV R+ D +++++Q G +LA+ R F + L +Q+ + +
Sbjct: 68 HVVRYFSAWAED--DHMLIQNEYCNGGSLADAISENYRIMSYFKEAELKDLLLQVGRGLR 125
Query: 127 SIHSVGFLHRDIKPSNFSIGR 147
IHS+ +H DIKPSN I R
Sbjct: 126 YIHSMSLVHMDIKPSNIFISR 146
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 58/124 (46%), Gaps = 18/124 (14%)
Query: 54 KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRR-----AQPRG 107
++ + ME+++ + L +HV F G ++ F +VV++L + ++L EL + +P
Sbjct: 85 REKMSMEISIHRSL-AHQHVVGFHGFFEDNDFVFVVLELCRRRSLLELHKRRKALTEPEA 143
Query: 108 AFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
+ L QI+ + +H +HRD+K N + V + DFGLA +
Sbjct: 144 RYYLR-------QIVLGCQYLHRNRVIHRDLKLGNLFLNE----DLEVKIGDFGLATKVE 192
Query: 168 TSSE 171
E
Sbjct: 193 YDGE 196
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 65/171 (38%), Gaps = 14/171 (8%)
Query: 52 QPKQVLKMEVAVLKKLQGKEHVCRF-IGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFS 110
+P V E VLKKL K V F I R ++M+ +P A+
Sbjct: 49 RPVDVQMREFEVLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYG 108
Query: 111 LSTTLRLGI--QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYML-DFGLARQYT 167
L + L + ++ + + G +HR+IKP N + + + VY L DFG AR+
Sbjct: 109 LPESEFLIVLRDVVGGMNHLRENGIVHRNIKPGNI-MRVIGEDGQSVYKLTDFGAARELE 167
Query: 168 TSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSL 218
+ T E P A + K+ G DLWS+
Sbjct: 168 DDEQFVXLYGTE--EYLHPD-------MYERAVLRKDHQKKYGATVDLWSI 209
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 78 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 137 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 178
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWS 204
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 35 HDLVTKEN---VALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVV 89
H+L+ +++ VA+K E++ +Q + E +L LQ +H+ RF G R +V
Sbjct: 34 HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMV 92
Query: 90 MQL---------------QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFL 134
+ K LA P G L L + Q+ + + + F+
Sbjct: 93 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQVAAGMVYLAGLHFV 151
Query: 135 HRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
HRD+ N +G+ V + DFG++R ++ R
Sbjct: 152 HRDLATRNCLVGQ----GLVVKIGDFGMSRDIYSTDYYR 186
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 112 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 170
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 171 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 212
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 213 GKVPIKWMALESILHRIYTHQSDVWS 238
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 133 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 188
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 189 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 227
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 37/159 (23%), Positives = 66/159 (41%), Gaps = 26/159 (16%)
Query: 35 HDLVTKEN---VALKV--ESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVV 89
H+L+ +++ VA+K E++ +Q + E +L LQ +H+ RF G R +V
Sbjct: 40 HNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQ-HQHIVRFFGVCTEGRPLLMV 98
Query: 90 MQL---------------QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFL 134
+ K LA P G L L + Q+ + + + F+
Sbjct: 99 FEYMRHGDLNRFLRSHGPDAKLLAGGEDVAP-GPLGLGQLLAVASQVAAGMVYLAGLHFV 157
Query: 135 HRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
HRD+ N +G+ V + DFG++R ++ R
Sbjct: 158 HRDLATRNCLVGQ----GLVVKIGDFGMSRDIYSTDYYR 192
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 74 CRFIGC-----GRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESI 128
C FI C D+ ++++ + G +L G FS + +I+ +E +
Sbjct: 250 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGVFSEADMRFYAAEIILGLEHM 307
Query: 129 HSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
H+ ++RD+KP+N + H V + D GLA ++
Sbjct: 308 HNRFVVYRDLKPANILLDEHGH----VRISDLGLACDFS 342
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 81 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 140 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 181
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWS 207
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 79 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 137
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 138 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 179
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 180 GKVPIKWMALESILHRIYTHQSDVWS 205
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 138 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 193
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 194 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 139 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 180
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWS 206
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 74 CRFIGCGR-----NDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESI 128
C FI C D+ ++++ + G +L G FS + +I+ +E +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 129 HSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
H+ ++RD+KP+N + H V + D GLA ++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGH----VRISDLGLACDFS 343
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 74 CRFIGCGR-----NDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESI 128
C FI C D+ ++++ + G +L G FS + +I+ +E +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 129 HSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
H+ ++RD+KP+N + H V + D GLA ++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGH----VRISDLGLACDFS 343
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/111 (22%), Positives = 46/111 (41%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR N
Sbjct: 156 FGLQVAKGMKYLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYDKEYYSVHN 211
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
T G + V++ ++ + + ++ D+WS +L E +
Sbjct: 212 KT------------GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 250
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/99 (24%), Positives = 45/99 (45%), Gaps = 11/99 (11%)
Query: 74 CRFIGC-----GRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESI 128
C FI C D+ ++++ + G +L G FS + +I+ +E +
Sbjct: 251 CPFIVCMSYAFHTPDKLSFILDLMNGGDLH--YHLSQHGVFSEADMRFYAAEIILGLEHM 308
Query: 129 HSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYT 167
H+ ++RD+KP+N + H V + D GLA ++
Sbjct: 309 HNRFVVYRDLKPANILLDEHGH----VRISDLGLACDFS 343
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 88 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 146
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 147 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 188
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 189 GKVPIKWMALESILHRIYTHQSDVWS 214
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V+ + +L + + + L + +
Sbjct: 63 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEXTARQGAKF 177
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 178 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 210
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 57/146 (39%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 85 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 144 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 185
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWS 211
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 32.7 bits (73), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGXLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 137 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 178
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWS 204
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 4/45 (8%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
Q+L+ + H LHRD+KP N I + + DFGLAR
Sbjct: 108 QLLRGLAYCHRQKVLHRDLKPQNLLINE----RGELKLADFGLAR 148
>pdb|2IN6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd311839
pdb|2IO6|A Chain A, Wee1 Kinase Complexed With Inhibitor Pd330961
Length = 287
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGR 147
L +Q+ + + IHS+ +H DIKPSN I R
Sbjct: 118 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
>pdb|3BI6|A Chain A, Wee1 Kinase Complex With Inhibitor Pd352396
pdb|3BIZ|A Chain A, Wee1 Kinase Complex With Inhibitor Pd331618
pdb|3CQE|A Chain A, Wee1 Kinase Complex With Inhibitor Pd074291
pdb|3CR0|A Chain A, Wee1 Kinase Complex With Inhibitor Pd259_809
Length = 287
Score = 32.7 bits (73), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGR 147
L +Q+ + + IHS+ +H DIKPSN I R
Sbjct: 118 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 148
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 72 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 130
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 131 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 172
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 173 GKVPIKWMALESILHRIYTHQSDVWS 198
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/31 (45%), Positives = 20/31 (64%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGR 147
L +Q+ + + IHS+ +H DIKPSN I R
Sbjct: 120 LLLQVGRGLRYIHSMSLVHMDIKPSNIFISR 150
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 137 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 178
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWS 204
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 32.7 bits (73), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 25/117 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q L A+ +H +HRD+K N L + + DFG++ + T + R+
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNI----LFTLDGDIKLADFGVSAKNTRXIQRRD----- 193
Query: 180 SGEVRAPRAAAGFRGTVRYAS-----INAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K++ D+WSL L+E I+ P
Sbjct: 194 -----------SFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 32.7 bits (73), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + +F
Sbjct: 99 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIANF 154
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 155 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 195
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 196 VLCYEFLVGKPPF 208
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 37/163 (22%), Positives = 70/163 (42%), Gaps = 13/163 (7%)
Query: 6 LLQQGHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVL 64
L++ G + R+ VIRK D+ K+ VA+K V+SA + E+ +L
Sbjct: 28 LVKIGDLFNGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLL 87
Query: 65 KKLQ-------GKEHVCRFIG----CGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLST 113
K ++ +E V + + G N +V ++ G +L + L
Sbjct: 88 KSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKSNYQGLPLPC 147
Query: 114 TLRLGIQILKAIESIHS-VGFLHRDIKPSNFSIGRLQHTSRRV 155
++ Q+L+ ++ +H+ +H DIKP N + + RR+
Sbjct: 148 VKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRL 190
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 32.3 bits (72), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 45/113 (39%), Gaps = 24/113 (21%)
Query: 41 ENVALKVESARQPKQVLKM-----------EVAVLKKLQGKEHVCRFIGCGRNDRFNYVV 89
+NV E+AR QVL+ V +L+ + H+C +V
Sbjct: 49 KNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWFEHHGHIC-------------IV 95
Query: 90 MQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSN 142
+L G + + + F L ++ QI K++ +HS H D+KP N
Sbjct: 96 FELLGLSTYDFIKENGFLPFRLDHIRKMAYQICKSVNFLHSNKLTHTDLKPEN 148
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 84 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 142
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 143 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 184
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 185 GKVPIKWMALESILHRIYTHQSDVWS 210
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 32.3 bits (72), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 140 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 181
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWS 207
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 137 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 178
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWS 204
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 32.3 bits (72), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 80 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 139 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 180
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWS 206
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 140 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 181
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWS 207
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 32.3 bits (72), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 81 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 139
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 140 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 181
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 182 GKVPIKWMALESILHRIYTHQSDVWS 207
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 32.3 bits (72), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 78 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 136
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 137 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 178
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 179 GKVPIKWMALESILHRIYTHQSDVWS 204
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 36/93 (38%), Gaps = 5/93 (5%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 103 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 161
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
+HRD+ N + QH V + DFGLA+
Sbjct: 162 RLVHRDLAARNVLVKTPQH----VKITDFGLAK 190
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/149 (22%), Positives = 53/149 (35%), Gaps = 16/149 (10%)
Query: 86 NYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
N + L+G +L +L + Q G L Q L+ +E +HS LH D+K N
Sbjct: 161 NIFMELLEGGSLGQLVKEQ--GCLPEDRALYYLGQALEGLEYLHSRRILHGDVKADNV-- 216
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L + DFG A ++ T GT + +
Sbjct: 217 -LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY-----------IPGTETHMAPEVVL 264
Query: 206 NKEMGRHDDLWSLFYMLVEFVNIQHPLVK 234
+ D+WS M++ +N HP +
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHPWTQ 293
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 52/115 (45%), Gaps = 5/115 (4%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL-QGKNLAELRRAQPRGAFSLSTTLRLG 118
EVAVLK L ++ + + R Y+VM+ +G L R F+ +
Sbjct: 86 EVAVLKLLD-HPNIMKLYDFFEDKRNYYLVMECYKGGEL--FDEIIHRMKFNEVDAAVII 142
Query: 119 IQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
Q+L + +H +HRD+KP N + + + ++DFGL+ + +++
Sbjct: 143 KQVLSGVTYLHKHNIVHRDLKPENLLL-ESKEKDALIKIVDFGLSAVFENQKKMK 196
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 144 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 185
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWS 211
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 32.3 bits (72), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 29/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G + + L + R + L +QI K + +
Sbjct: 85 HVCRLLGICLTSTVQLITQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 143
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFGLA+ +E + ++ A G
Sbjct: 144 RLVHRDLAARNVLVKTPQH----VKITDFGLAK--LLGAEEKEYH------------AEG 185
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 186 GKVPIKWMALESILHRIYTHQSDVWS 211
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 31/127 (24%), Positives = 47/127 (37%), Gaps = 24/127 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + DF
Sbjct: 101 RELQKLSRFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SNGELKIADF 156
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRAAAG-FRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 157 GWS-------------------VHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 197
Query: 220 YMLVEFV 226
+ EF+
Sbjct: 198 VLCYEFL 204
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 32.3 bits (72), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 55/152 (36%), Gaps = 55/152 (36%)
Query: 114 TLRLGIQILKAI--ESIHSVGFLH-------RDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
T + IQ++K I ++S ++H RD+KPSN L + RV + DFG
Sbjct: 145 TCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNI----LMDKNGRVKLSDFG--- 197
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEM--GRHDDLWSL---- 218
E + G RGT + N+ G D+WSL
Sbjct: 198 ---------------ESEYMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICL 242
Query: 219 ---FYMLVEFV---------------NIQHPL 232
FY +V F NI++PL
Sbjct: 243 YVMFYNVVPFSLKISLVELFNNIRTKNIEYPL 274
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V + +L + + + L + +
Sbjct: 53 EAQVMKKLR-HEKLVQLYAVVSEEPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 111
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 112 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEXTARQGAKF 167
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 168 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 200
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 32.3 bits (72), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 63/168 (37%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V+ + +L + + + L + +
Sbjct: 63 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 178 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 210
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 32.0 bits (71), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 31/133 (23%), Positives = 49/133 (36%), Gaps = 24/133 (18%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDF 160
R Q F T ++ A+ HS +HRDIKP N +G ++ + + +F
Sbjct: 100 RELQKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLG----SAGELKIANF 155
Query: 161 GLARQYTTSSELRNFNTTSSGEVRAPRA-AAGFRGTVRYASINAHKNKEMGRHDDLWSLF 219
G + V AP + GT+ Y + + DLWSL
Sbjct: 156 GWS-------------------VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLG 196
Query: 220 YMLVEFVNIQHPL 232
+ EF+ + P
Sbjct: 197 VLCYEFLVGKPPF 209
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 32.0 bits (71), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 27/117 (23%), Positives = 45/117 (38%), Gaps = 25/117 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q L A+ +H +HRD+K N L + + DFG++ + T + R+
Sbjct: 143 QTLDALNYLHDNKIIHRDLKAGNI----LFTLDGDIKLADFGVSAKNTRXIQRRD----- 193
Query: 180 SGEVRAPRAAAGFRGTVRYAS-----INAHKNKEMGRHDDLWSLFYMLVEFVNIQHP 231
F GT + + K++ D+WSL L+E I+ P
Sbjct: 194 -----------XFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.0 bits (71), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL--STTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR FSL ++ + Q+ A+ +
Sbjct: 452 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 509 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 545
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 40/208 (19%)
Query: 36 DLVTKENVALKVES-----ARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D+ E VA+K S + + Q + EV L+KL+ + ++ GC + ++VM
Sbjct: 75 DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLR-HPNTIQYRGCYLREHTAWLVM 133
Query: 91 QL---QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGR 147
+ +L E+ + +P ++ +Q + +HS +HRD+K N
Sbjct: 134 EYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQ---GLAYLHSHNMIHRDVKAGNI---- 185
Query: 148 LQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNK 207
L V + DFG S + AP A F GT + +
Sbjct: 186 LLSEPGLVKLGDFG------------------SASIMAP--ANXFVGTPYWMAPEVILAM 225
Query: 208 EMGRHD---DLWSLFYMLVEFVNIQHPL 232
+ G++D D+WSL +E + PL
Sbjct: 226 DEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMLD----KEFD 190
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 191 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 32.0 bits (71), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 48/208 (23%), Positives = 83/208 (39%), Gaps = 40/208 (19%)
Query: 36 DLVTKENVALKVES-----ARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVM 90
D+ E VA+K S + + Q + EV L+KL+ + ++ GC + ++VM
Sbjct: 36 DVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTI-QYRGCYLREHTAWLVM 94
Query: 91 QL---QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGR 147
+ +L E+ + +P ++ +Q + +HS +HRD+K N
Sbjct: 95 EYCLGSASDLLEVHK-KPLQEVEIAAVTHGALQ---GLAYLHSHNMIHRDVKAGNI---- 146
Query: 148 LQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNK 207
L V + DFG S + AP A F GT + +
Sbjct: 147 LLSEPGLVKLGDFG------------------SASIMAP--ANXFVGTPYWMAPEVILAM 186
Query: 208 EMGRHD---DLWSLFYMLVEFVNIQHPL 232
+ G++D D+WSL +E + PL
Sbjct: 187 DEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 25/42 (59%), Gaps = 3/42 (7%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFG 161
Q++ AI+ HS G +HRDIK N I + ++ ++DFG
Sbjct: 147 QVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAK---LIDFG 185
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 32.0 bits (71), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL--STTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR FSL ++ + Q+ A+ +
Sbjct: 452 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 508
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L + V + DFGL+R S+
Sbjct: 509 SKRFVHRDIAARNV----LVSATDCVKLGDFGLSRYMEDST 545
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 31.6 bits (70), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 44/109 (40%), Gaps = 18/109 (16%)
Query: 109 FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTT 168
L T +R + I +E + S F+HRD+ N + V + DFGL+R+
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRNFIHRDLAARNCMLAE----DMTVCVADFGLSRK--- 186
Query: 169 SSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWS 217
SG+ R + V++ ++ + + H D+W+
Sbjct: 187 ---------IYSGDYY--RQGCASKLPVKWLALESLADNLYTVHSDVWA 224
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 31.6 bits (70), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL--STTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR FSL ++ + Q+ A+ +
Sbjct: 72 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 129 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 165
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 136 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYD----KEFD 187
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 188 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 230
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 31.6 bits (70), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYD----KEFD 189
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 190 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 139 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYD----KEFD 190
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 191 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 233
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 31.6 bits (70), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 138 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYD----KEFD 189
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 190 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 232
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 31.6 bits (70), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 197 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYD----KEFD 248
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 249 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 291
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 16/111 (14%)
Query: 117 LGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFN 176
G+Q+ K ++ + S F+HRD+ N + V + DFGLAR + F+
Sbjct: 143 FGLQVAKGMKFLASKKFVHRDLAARNCMLDE----KFTVKVADFGLARDMYD----KEFD 194
Query: 177 TTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ + G + V++ ++ + + ++ D+WS +L E +
Sbjct: 195 SVHN--------KTGAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMT 237
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 31.6 bits (70), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 23/154 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y++ + K +L + ++ L + QI + + I ++HRD++ +N
Sbjct: 85 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI-- 142
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L S + DFGLAR E A R A F +++ + A
Sbjct: 143 --LVSASLVCKIADFGLAR------------VIEDNEYTA-REGAKF--PIKWTAPEAIN 185
Query: 206 NKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
D+WS +L+E V I +P + P
Sbjct: 186 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 219
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 31.6 bits (70), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 25/123 (20%), Positives = 50/123 (40%), Gaps = 16/123 (13%)
Query: 105 PRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
P+ ++ + G+Q+ + +E + F+HRD+ N + S V + DFGLAR
Sbjct: 117 PQRNPTVKDLISFGLQVARGMEYLAEQKFVHRDLAARNCMLDE----SFTVKVADFGLAR 172
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVE 224
+ ++ R P V++ ++ + + D+WS +L E
Sbjct: 173 DIL---DREYYSVQQHRHARLP---------VKWTALESLQTYRFTTKSDVWSFGVLLWE 220
Query: 225 FVN 227
+
Sbjct: 221 LLT 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 31.6 bits (70), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 81 YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 140
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 141 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 188
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 189 -------SDVWSFGILLTELTT 203
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.6 bits (70), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSL--STTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR FSL ++ + Q+ A+ +
Sbjct: 72 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE 128
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L + V + DFGL+R S+
Sbjct: 129 SKRFVHRDIAARNV----LVSATDCVKLGDFGLSRYMEDST 165
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 81/203 (39%), Gaps = 28/203 (13%)
Query: 35 HDLVTKENVALKVES---ARQP--KQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVV 89
D V + VALK+ S + P + + E +LQ + HV G D YV
Sbjct: 54 EDTVRERIVALKLXSETLSSDPVFRTRXQREARTAGRLQ-EPHVVPIHDFGEIDGQLYVD 112
Query: 90 MQL-QGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRL 148
+L G +LA R Q G + + + QI A+++ H+ G HRD+KP N L
Sbjct: 113 XRLINGVDLAAXLRRQ--GPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPENI----L 166
Query: 149 QHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKE 208
Y++DFG+A TT +L T GT+ Y +
Sbjct: 167 VSADDFAYLVDFGIA-SATTDEKLTQLGNTV--------------GTLYYXAPERFSESH 211
Query: 209 MGRHDDLWSLFYMLVEFVNIQHP 231
D+++L +L E + P
Sbjct: 212 ATYRADIYALTCVLYECLTGSPP 234
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 31.2 bits (69), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 23/154 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y++ + K +L + ++ L + QI + + I ++HRD++ +N
Sbjct: 258 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI-- 315
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L S + DFGLAR E A R A F +++ + A
Sbjct: 316 --LVSASLVCKIADFGLAR------------VIEDNEYTA-REGAKF--PIKWTAPEAIN 358
Query: 206 NKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
D+WS +L+E V I +P + P
Sbjct: 359 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 392
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 31.2 bits (69), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 21/175 (12%)
Query: 53 PKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS 112
P+ L+ E V+KKL+ E + + + V + +L + + + L
Sbjct: 223 PEAFLQ-EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
+ + QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYT 336
Query: 173 RNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 376
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 31.2 bits (69), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 88 YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 147
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 148 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 195
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 196 -------SDVWSFGILLTELTT 210
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V + +L + + + L + +
Sbjct: 60 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEWTARQGAKF 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 175 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 207
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 31.2 bits (69), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 35/175 (20%), Positives = 66/175 (37%), Gaps = 21/175 (12%)
Query: 53 PKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLS 112
P+ L+ E V+KKL+ E + + + V + +L + + + L
Sbjct: 223 PEAFLQ-EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLP 280
Query: 113 TTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSEL 172
+ + QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 281 QLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYT 336
Query: 173 RNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 337 ARQGAKFPIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 376
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 31.2 bits (69), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 74 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 130
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 131 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 167
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V + +L + + + L + +
Sbjct: 60 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSA 118
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 119 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYTARQGAKF 174
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 175 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 207
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 69 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 125
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 126 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 162
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 31.2 bits (69), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 75 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 131
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 132 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 168
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 31.2 bits (69), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 77 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 133
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 134 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 170
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 100 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 156
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 157 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 193
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 72 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 129 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 165
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 88 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 147
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 148 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 195
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 196 -------SDVWSFGILLTELTT 210
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 41/181 (22%), Positives = 74/181 (40%), Gaps = 27/181 (14%)
Query: 57 LKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL---AELRRAQPRGAFSLST 113
+ +E+A+L +++ ++ + + N F +VM+ G L A + R PR L++
Sbjct: 76 VTLEIAILSRVE-HANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDR-HPRLDEPLAS 133
Query: 114 TLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELR 173
+ Q++ A+ + +HRDIK N I + ++DFG A
Sbjct: 134 YIFR--QLVSAVGYLRLKDIIHRDIKDENIVIAE----DFTIKLIDFGSAAYLERGKLFY 187
Query: 174 NFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
F T E AP G N ++ E+ ++WSL L V ++P
Sbjct: 188 TFCGTI--EYCAPEVLMG----------NPYRGPEL----EMWSLGVTLYTLVFEENPFC 231
Query: 234 K 234
+
Sbjct: 232 E 232
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 31.2 bits (69), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 49/101 (48%), Gaps = 9/101 (8%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRR-AQPRG-AFSLSTTLRLGIQILKAIESIH 129
H+ + IG + +++M+L L ELR Q R + L++ + Q+ A+ +
Sbjct: 72 HIVKLIGVITENPV-WIIMELC--TLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE 128
Query: 130 SVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSS 170
S F+HRDI N L ++ V + DFGL+R S+
Sbjct: 129 SKRFVHRDIAARNV----LVSSNDCVKLGDFGLSRYMEDST 165
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 30.8 bits (68), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V + +L + + + L + +
Sbjct: 63 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 122 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 178 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 210
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 30.8 bits (68), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 79 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 138
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 139 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 186
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 187 -------SDVWSFGILLTELTT 201
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 30.8 bits (68), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 77 YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 136
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 137 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 184
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 185 -------SDVWSFGILLTELTT 199
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 30.8 bits (68), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 53/142 (37%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGKN-LAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 88 YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 147
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 148 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 195
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 196 -------SDVWSFGILLTELTT 210
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 30.4 bits (67), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 62/168 (36%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V + +L + + + L + +
Sbjct: 312 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAA 370
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD++ +N +G + + DFGLAR +
Sbjct: 371 QIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFGLARLIEDNEYTARQGAKF 426
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 427 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 459
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 30.4 bits (67), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 48/123 (39%), Gaps = 19/123 (15%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQ 165
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 169
Query: 166 YTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEF 225
E TSS G + VR++ + D+W+ ++ E
Sbjct: 170 VLDDEE------TSS---------VGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEI 214
Query: 226 VNI 228
++
Sbjct: 215 YSL 217
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR- 164
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 98 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 153
Query: 165 ----QYTTS 169
+YT+S
Sbjct: 154 VLDDEYTSS 162
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 30.4 bits (67), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 54/142 (38%), Gaps = 20/142 (14%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y+V + K +L + + + L + + QI + + + ++HRD++ +N +
Sbjct: 254 YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILV 313
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
G + + DFGLAR + + AP AA R T++
Sbjct: 314 GE----NLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK-------- 361
Query: 206 NKEMGRHDDLWSLFYMLVEFVN 227
D+WS +L E
Sbjct: 362 -------SDVWSFGILLTELTT 376
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR- 164
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 154
Query: 165 ----QYTTS 169
+YT+S
Sbjct: 155 VLDDEYTSS 163
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR- 164
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 94 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 149
Query: 165 ----QYTTS 169
+YT+S
Sbjct: 150 VLDDEYTSS 158
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 30.4 bits (67), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR- 164
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 99 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 154
Query: 165 ----QYTTS 169
+YT+S
Sbjct: 155 VLDDEYTSS 163
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR- 164
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 105 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 160
Query: 165 ----QYTTS 169
+YT+S
Sbjct: 161 VLDDEYTSS 169
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 30.0 bits (66), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 33/69 (47%), Gaps = 9/69 (13%)
Query: 106 RGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR- 164
R F L + + +A+E + S FLHRD+ N L + V + DFGL+R
Sbjct: 114 RHRFQTQQLLEMCKDVCEAMEYLESKQFLHRDLAARNC----LVNDQGVVKVSDFGLSRY 169
Query: 165 ----QYTTS 169
+YT+S
Sbjct: 170 VLDDEYTSS 178
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
Q+L + HS+ HRD+K N + + R+ + DFG Y+ SS L +
Sbjct: 124 QLLSGVSYCHSMQICHRDLKLENTLLD--GSPAPRLKICDFG----YSKSSVLHS----- 172
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEM-GRHDDLWS----LFYMLVEFVNIQHPLVK 234
P++ GT Y + +E G+ D+WS L+ MLV + P +
Sbjct: 173 -----QPKSTV---GTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFEDP--E 222
Query: 235 APRAAAGFRGTVR 247
PR +R T++
Sbjct: 223 EPR---DYRKTIQ 232
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 30.0 bits (66), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 61/168 (36%), Gaps = 20/168 (11%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGI 119
E V+KKL+ E + + + V + +L + + + L + +
Sbjct: 63 EAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAA 121
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI + + + ++HRD+ +N +G + + DFGLAR +
Sbjct: 122 QIASGMAYVERMNYVHRDLAAANILVGE----NLVCKVADFGLARLIEDNEYTARQGAKF 177
Query: 180 SGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
+ AP AA R T++ D+WS +L E
Sbjct: 178 PIKWTAPEAALYGRFTIK---------------SDVWSFGILLTELTT 210
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 30.0 bits (66), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 82 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 140
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFG A+ +E + ++ A G
Sbjct: 141 RLVHRDLAARNVLVKTPQH----VKITDFGRAK--LLGAEEKEYH------------AEG 182
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 183 GKVPIKWMALESILHRIYTHQSDVWS 208
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFG A+ +E + ++ A G
Sbjct: 139 RLVHRDLAARNVLVKTPQH----VKITDFGRAK--LLGAEEKEYH------------AEG 180
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWS 206
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 28/146 (19%), Positives = 56/146 (38%), Gaps = 19/146 (13%)
Query: 72 HVCRFIGCGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSV 131
HVCR +G ++ + L + R + L +QI K + +
Sbjct: 80 HVCRLLGICLTSTVQLIMQLMPFGCLLDYVREH-KDNIGSQYLLNWCVQIAKGMNYLEDR 138
Query: 132 GFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAG 191
+HRD+ N + QH V + DFG A+ +E + ++ A G
Sbjct: 139 RLVHRDLAARNVLVKTPQH----VKITDFGRAK--LLGAEEKEYH------------AEG 180
Query: 192 FRGTVRYASINAHKNKEMGRHDDLWS 217
+ +++ ++ + ++ D+WS
Sbjct: 181 GKVPIKWMALESILHRIYTHQSDVWS 206
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ +E +H ++RD+KP N L V + D GLA EL+ T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENV----LLDDDGNVRISDLGLA------VELKAGQTKT 346
Query: 180 SGEVRAP 186
G P
Sbjct: 347 KGYAGTP 353
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 29.6 bits (65), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ +E +H ++RD+KP N L V + D GLA EL+ T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENV----LLDDDGNVRISDLGLA------VELKAGQTKT 346
Query: 180 SGEVRAP 186
G P
Sbjct: 347 KGYAGTP 353
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQ-----PRGAFSLS 112
E+ VL KL ++ +G + + Y+ ++ G L LR+++ P A + S
Sbjct: 75 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 134
Query: 113 TTLRLGIQ--------ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
T L Q + + ++ + F+HRD+ N +G + ++ + DFGL+R
Sbjct: 135 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-NYVAK---IADFGLSR 190
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVE 224
EV + R VR+ +I + + D+WS +L E
Sbjct: 191 ---------------GQEVYVKKTMG--RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 233
Query: 225 FVNI 228
V++
Sbjct: 234 IVSL 237
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ +E +H ++RD+KP N L V + D GLA EL+ T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENV----LLDDDGNVRISDLGLA------VELKAGQTKT 346
Query: 180 SGEVRAP 186
G P
Sbjct: 347 KGYAGTP 353
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/184 (21%), Positives = 75/184 (40%), Gaps = 36/184 (19%)
Query: 60 EVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQL--QGKNLAELRRAQ-----PRGAFSLS 112
E+ VL KL ++ +G + + Y+ ++ G L LR+++ P A + S
Sbjct: 65 ELEVLCKLGHHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANS 124
Query: 113 TTLRLGIQ--------ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLAR 164
T L Q + + ++ + F+HRD+ N +G + ++ + DFGL+R
Sbjct: 125 TASTLSSQQLLHFAADVARGMDYLSQKQFIHRDLAARNILVGE-NYVAK---IADFGLSR 180
Query: 165 QYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVE 224
EV + R VR+ +I + + D+WS +L E
Sbjct: 181 ---------------GQEVYVKKTMG--RLPVRWMAIESLNYSVYTTNSDVWSYGVLLWE 223
Query: 225 FVNI 228
V++
Sbjct: 224 IVSL 227
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 29.6 bits (65), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 29/67 (43%), Gaps = 10/67 (14%)
Query: 120 QILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTS 179
QI+ +E +H ++RD+KP N L V + D GLA EL+ T +
Sbjct: 297 QIVSGLEHLHQRNIIYRDLKPENV----LLDDDGNVRISDLGLA------VELKAGQTKT 346
Query: 180 SGEVRAP 186
G P
Sbjct: 347 KGYAGTP 353
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 30/154 (19%), Positives = 56/154 (36%), Gaps = 33/154 (21%)
Query: 87 YVVMQLQGK-NLAELRRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSI 145
Y++ + K +L + ++ L + QI + + I ++HRD++ +N
Sbjct: 252 YIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMAFIEQRNYIHRDLRAANI-- 309
Query: 146 GRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHK 205
L S + DFGLAR G + +++ + A
Sbjct: 310 --LVSASLVCKIADFGLAR-------------------------VGAKFPIKWTAPEAIN 342
Query: 206 NKEMGRHDDLWSLFYMLVEFVN---IQHPLVKAP 236
D+WS +L+E V I +P + P
Sbjct: 343 FGSFTIKSDVWSFGILLMEIVTYGRIPYPGMSNP 376
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 29.3 bits (64), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 61/147 (41%), Gaps = 13/147 (8%)
Query: 10 GHIVKERWKVIRKXXXXXXXXXXXXHDLVTKENVALK-VESARQPKQVLKMEVAVLKKLQ 68
G + R+ VIRK D+ K VA+K V+SA+ + E+ +LK ++
Sbjct: 26 GDLFNGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKSAQHYTETALDEIKLLKCVR 85
Query: 69 -------GKEHVCRFIG----CGRNDRFNYVVMQLQGKNLAELRRAQPRGAFSLSTTLRL 117
K+ V + I G N +V ++ G +L + + +
Sbjct: 86 ESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLLKWIIKSNYQGLPVRCVKSI 145
Query: 118 GIQILKAIESIHS-VGFLHRDIKPSNF 143
Q+L+ ++ +HS +H DIKP N
Sbjct: 146 IRQVLQGLDYLHSKCKIIHTDIKPENI 172
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 29.3 bits (64), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSI 145
+LKA++ IH +G++HR +K S+ I
Sbjct: 137 VLKALDYIHHMGYVHRSVKASHILI 161
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRN 174
L+ QI K +E + + ++HRD+ N L RV + DFGL + E
Sbjct: 117 LQYTSQICKGMEYLGTKRYIHRDLATRNI----LVENENRVKIGDFGLTKVLPQDKEF-- 170
Query: 175 FNTTSSGE 182
F GE
Sbjct: 171 FKVKEPGE 178
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 29.3 bits (64), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 11/25 (44%), Positives = 19/25 (76%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSI 145
+LKA++ IH +G++HR +K S+ I
Sbjct: 121 VLKALDYIHHMGYVHRSVKASHILI 145
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 29.3 bits (64), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 35/186 (18%), Positives = 68/186 (36%), Gaps = 21/186 (11%)
Query: 43 VALK-VESARQPKQVLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNLAELR 101
VA+K ++ + E V+KKL+ E + + + V + +L +
Sbjct: 212 VAIKTLKPGNMSPEAFLQEAQVMKKLR-HEKLVQLYAVVSEEPIYIVTEYMSKGSLLDFL 270
Query: 102 RAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFG 161
+ + L + + QI + + + ++HRD++ +N +G + + DFG
Sbjct: 271 KGEMGKYLRLPQLVDMAAQIASGMAYVERMNYVHRDLRAANILVGE----NLVCKVADFG 326
Query: 162 LARQYTTSSELRNFNTTSSGEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYM 221
L R + + AP AA R T++ D+WS +
Sbjct: 327 LGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIK---------------SDVWSFGIL 371
Query: 222 LVEFVN 227
L E
Sbjct: 372 LTELTT 377
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 28.9 bits (63), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSS 180
I ++ + +G++HRD+ N I +++ + DFGLAR E TT
Sbjct: 156 IASGMKYLSDMGYVHRDLAARNILI----NSNLVCKVSDFGLARVLEDDPEAA--YTTRG 209
Query: 181 GEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
G++ +R+ S A ++ D+WS +L E ++
Sbjct: 210 GKI-----------PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 28.9 bits (63), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 46/107 (42%), Gaps = 17/107 (15%)
Query: 121 ILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSELRNFNTTSS 180
I ++ + +GF+HRD+ N I +++ + DFGL+R E TT
Sbjct: 156 IASGMKYLSDMGFVHRDLAARNILI----NSNLVCKVSDFGLSRVLEDDPEAA--YTTRG 209
Query: 181 GEVRAPRAAAGFRGTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVN 227
G++ +R+ S A ++ D+WS +L E ++
Sbjct: 210 GKI-----------PIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMS 245
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 28.9 bits (63), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 5/41 (12%)
Query: 194 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLVK 234
GT YA I H++ RHDDL S VE VN+ P V+
Sbjct: 202 GTAAYA-IAWHRD----RHDDLLSPHVAAVELVNVLRPTVE 237
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 28.5 bits (62), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 194 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
GT YA I H++ RHDDL S VE VN+ P V
Sbjct: 202 GTAAYA-IAWHRD----RHDDLLSPHVAAVELVNVLEPTV 236
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 28.5 bits (62), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 194 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
GT YA I H++ RHDDL S VE VN+ P V
Sbjct: 210 GTAAYA-IAWHRD----RHDDLLSPHVAAVELVNVLRPTV 244
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 194 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
GT YA I H++ RHDDL S VE VN+ P V
Sbjct: 210 GTAAYA-IAWHRD----RHDDLLSPHVAAVELVNVLRPTV 244
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 28.5 bits (62), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 194 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
GT YA I H++ RHDDL S VE VN+ P V
Sbjct: 210 GTAAYA-IAWHRD----RHDDLLSPHVAAVELVNVLRPTV 244
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 28.5 bits (62), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 18/40 (45%), Positives = 21/40 (52%), Gaps = 5/40 (12%)
Query: 194 GTVRYASINAHKNKEMGRHDDLWSLFYMLVEFVNIQHPLV 233
GT YA I H++ RHDDL S VE VN+ P V
Sbjct: 202 GTAAYA-IAWHRD----RHDDLLSPHVAAVELVNVLRPTV 236
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 28.1 bits (61), Expect = 7.0, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 4/66 (6%)
Query: 109 FSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTT 168
L T L+ + I +E + + FLHRD+ N + V + DFGL+++ +
Sbjct: 144 IPLQTLLKFMVDIALGMEYLSNRNFLHRDLAARNCML----RDDMTVCVADFGLSKKIYS 199
Query: 169 SSELRN 174
R
Sbjct: 200 GDYYRQ 205
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
L+ QI K +E + + ++HRD+ N L RV + DFGL + E
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNI----LVENENRVKIGDFGLTKVLPQDKE 172
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 27.7 bits (60), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 26/57 (45%), Gaps = 4/57 (7%)
Query: 115 LRLGIQILKAIESIHSVGFLHRDIKPSNFSIGRLQHTSRRVYMLDFGLARQYTTSSE 171
L+ QI K +E + + ++HRD+ N L RV + DFGL + E
Sbjct: 120 LQYTSQICKGMEYLGTKRYIHRDLATRNI----LVENENRVKIGDFGLTKVLPQDKE 172
>pdb|1UK5|A Chain A, Solution Structure Of The Murine Bag Domain Of Bcl2-
Associated Athanogene 3
Length = 111
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 4/88 (4%)
Query: 41 ENVALKVESARQPKQ---VLKMEVAVLKKLQGKEHVCRFIGCGRNDRFNYVVMQLQGKNL 97
E A K A P + VLK+E A+L+K+QG E + D+ ++ + K L
Sbjct: 11 EPAAPKSGEAETPPKHPGVLKVE-AILEKVQGLEQAVDSFEGKKTDKKYLMIEEYLTKEL 69
Query: 98 AELRRAQPRGAFSLSTTLRLGIQILKAI 125
L P G + R G++ ++ I
Sbjct: 70 LALDSVDPEGRADVRQARRDGVRKVQTI 97
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+ Q G F + ++ A+ H +HRDIKP N +G
Sbjct: 103 KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG 148
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 27.3 bits (59), Expect = 9.9, Method: Compositional matrix adjust.
Identities = 13/46 (28%), Positives = 20/46 (43%)
Query: 101 RRAQPRGAFSLSTTLRLGIQILKAIESIHSVGFLHRDIKPSNFSIG 146
+ Q G F + ++ A+ H +HRDIKP N +G
Sbjct: 104 KELQKHGRFDEQRSATFMEELADALHYCHERKVIHRDIKPENLLMG 149
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.135 0.396
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,010,941
Number of Sequences: 62578
Number of extensions: 294111
Number of successful extensions: 1615
Number of sequences better than 100.0: 911
Number of HSP's better than 100.0 without gapping: 619
Number of HSP's successfully gapped in prelim test: 292
Number of HSP's that attempted gapping in prelim test: 802
Number of HSP's gapped (non-prelim): 983
length of query: 309
length of database: 14,973,337
effective HSP length: 99
effective length of query: 210
effective length of database: 8,778,115
effective search space: 1843404150
effective search space used: 1843404150
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (24.3 bits)