Your job contains 1 sequence.
>psy7163
GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRG
KKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCL
PEDCTIEDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYL
SKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWREFWRS
QDNNNGDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSL
TSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQN
STQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQNSLEEWANWLKN
VVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMF
YLIEHQVALATGETPIAVIGSKESNPVESSQNPMDNGLYAHGQNNILVHEELHISHAPKR
IKLS
The BLAST search returned 3 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy7163
(544 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|A6QLW9 - symbol:RFX2 "DNA-binding protein RFX2"... 1014 1.6e-111 2
UNIPROTKB|Q0V9K5 - symbol:rfx3 "Transcription factor RFX3... 1009 2.7e-111 2
UNIPROTKB|F1NC32 - symbol:RFX3 "Uncharacterized protein" ... 1004 9.0e-111 2
MGI|MGI:106583 - symbol:Rfx2 "regulatory factor X, 2 (inf... 1005 1.5e-110 2
UNIPROTKB|P48380 - symbol:RFX3 "Transcription factor RFX3... 1000 2.4e-110 2
UNIPROTKB|E2R586 - symbol:RFX2 "Uncharacterized protein" ... 1002 3.0e-110 2
RGD|1588579 - symbol:Rfx2 "regulatory factor X, 2 (influe... 1002 3.0e-110 2
UNIPROTKB|E2RAK6 - symbol:RFX3 "Uncharacterized protein" ... 999 3.0e-110 2
UNIPROTKB|Q4R3I8 - symbol:RFX3 "Transcription factor RFX3... 999 3.0e-110 2
MGI|MGI:106582 - symbol:Rfx3 "regulatory factor X, 3 (inf... 997 4.9e-110 2
UNIPROTKB|J9P7V3 - symbol:RFX3 "Uncharacterized protein" ... 997 4.9e-110 2
UNIPROTKB|D4A1I7 - symbol:Rfx3 "RCG47137" species:10116 "... 993 1.3e-109 2
UNIPROTKB|F1M313 - symbol:Rfx3 "Protein Rfx3" species:101... 993 1.3e-109 2
UNIPROTKB|F1MW17 - symbol:RFX3 "Uncharacterized protein" ... 990 2.7e-109 2
ZFIN|ZDB-GENE-050227-4 - symbol:rfx2 "regulatory factor X... 986 1.9e-108 2
UNIPROTKB|E2R2T9 - symbol:RFX1 "Uncharacterized protein" ... 1004 3.9e-108 2
UNIPROTKB|E2R585 - symbol:RFX1 "Uncharacterized protein" ... 1004 3.9e-108 2
ZFIN|ZDB-GENE-061103-253 - symbol:rfx3 "regulatory factor... 979 3.9e-108 2
RGD|1306574 - symbol:Rfx1 "regulatory factor X, 1 (influe... 1001 8.1e-108 2
UNIPROTKB|E1BSB3 - symbol:RFX2 "Uncharacterized protein" ... 982 1.0e-107 2
UNIPROTKB|E1BVZ9 - symbol:RFX2 "Uncharacterized protein" ... 982 1.0e-107 2
UNIPROTKB|F1SD60 - symbol:RFX1 "Uncharacterized protein" ... 999 1.3e-107 2
UNIPROTKB|P22670 - symbol:RFX1 "MHC class II regulatory f... 996 2.7e-107 2
MGI|MGI:105982 - symbol:Rfx1 "regulatory factor X, 1 (inf... 996 2.7e-107 2
ZFIN|ZDB-GENE-070424-94 - symbol:rfx1a "regulatory factor... 999 7.2e-107 2
ZFIN|ZDB-GENE-041008-101 - symbol:rfx1b "regulatory facto... 971 2.2e-105 2
FB|FBgn0020379 - symbol:Rfx "Rfx" species:7227 "Drosophil... 1035 1.6e-104 1
UNIPROTKB|F1MGS1 - symbol:Bt.77818 "Uncharacterized prote... 999 5.8e-103 2
UNIPROTKB|E1BP11 - symbol:Bt.77818 "Uncharacterized prote... 997 9.5e-103 2
UNIPROTKB|P48378 - symbol:RFX2 "DNA-binding protein RFX2"... 994 3.4e-100 1
UNIPROTKB|F6USP3 - symbol:RFX3 "Transcription factor RFX3... 662 5.2e-65 1
WB|WBGene00000914 - symbol:daf-19 species:6239 "Caenorhab... 556 5.4e-60 2
UNIPROTKB|F1NZN9 - symbol:RFX4 "Uncharacterized protein" ... 414 2.4e-52 3
UNIPROTKB|Q33E94 - symbol:RFX4 "Transcription factor RFX4... 408 1.3e-51 3
MGI|MGI:1918387 - symbol:Rfx4 "regulatory factor X, 4 (in... 404 1.4e-51 3
ZFIN|ZDB-GENE-040909-2 - symbol:rfx4 "regulatory factor X... 404 1.4e-51 3
RGD|1562092 - symbol:Rfx4 "regulatory factor X, 4 (influe... 404 1.7e-51 3
UNIPROTKB|E2RMU4 - symbol:RFX4 "Uncharacterized protein" ... 406 2.2e-51 3
UNIPROTKB|E2RMU3 - symbol:RFX4 "Uncharacterized protein" ... 406 2.5e-51 3
UNIPROTKB|F1MFD3 - symbol:RFX4 "Uncharacterized protein" ... 405 1.3e-50 3
UNIPROTKB|F1SPQ1 - symbol:RFX4 "Uncharacterized protein" ... 342 6.9e-39 3
ZFIN|ZDB-GENE-041014-299 - symbol:rfx6 "regulatory factor... 364 3.3e-33 2
UNIPROTKB|Q8HWS3 - symbol:RFX6 "DNA-binding protein RFX6"... 361 1.2e-32 2
UNIPROTKB|E1C4M7 - symbol:RFX6 "Uncharacterized protein" ... 360 1.6e-32 2
UNIPROTKB|E1BFK8 - symbol:LOC524074 "Uncharacterized prot... 360 1.7e-32 2
UNIPROTKB|E2RTB6 - symbol:RFX6 "Uncharacterized protein" ... 358 1.8e-32 3
RGD|1307491 - symbol:Rfx6 "regulatory factor X, 6" specie... 321 2.5e-32 3
UNIPROTKB|D2HNW6 - symbol:RFX6 "DNA-binding protein RFX6"... 358 3.0e-32 2
MGI|MGI:2445208 - symbol:Rfx6 "regulatory factor X, 6" sp... 357 4.0e-32 2
RGD|1307779 - symbol:Rfx3 "regulatory factor X, 3 (influe... 308 2.6e-25 1
MGI|MGI:3588206 - symbol:Rfx8 "regulatory factor X 8" spe... 255 5.6e-20 2
RGD|1560724 - symbol:Rfx8 "RFX family member 8, lacking R... 246 4.1e-18 2
UNIPROTKB|E1BAR6 - symbol:LOC100138955 "Uncharacterized p... 245 7.8e-18 2
UNIPROTKB|F1STG4 - symbol:RFX8 "Uncharacterized protein" ... 237 9.4e-18 2
UNIPROTKB|J9P0L9 - symbol:RFX8 "Uncharacterized protein" ... 235 5.9e-17 2
UNIPROTKB|Q6ZV50 - symbol:RFX8 "DNA-binding protein RFX8"... 235 8.5e-17 2
UNIPROTKB|E2RJY6 - symbol:RFX8 "Uncharacterized protein" ... 234 9.0e-17 2
UNIPROTKB|F8VRD4 - symbol:RFX4 "Transcription factor RFX4... 115 2.0e-14 3
POMBASE|SPAC3G9.14 - symbol:sak1 "transcriptional repress... 94 8.4e-06 3
UNIPROTKB|I3LDY8 - symbol:I3LDY8 "Uncharacterized protein... 110 1.9e-05 1
UNIPROTKB|K7EQA0 - symbol:RFX2 "DNA-binding protein RFX2"... 108 3.2e-05 1
UNIPROTKB|K7EJD4 - symbol:RFX2 "DNA-binding protein RFX2"... 107 4.0e-05 1
CGD|CAL0002122 - symbol:RFX1 species:5476 "Candida albica... 115 0.00028 2
UNIPROTKB|B4DZB7 - symbol:RFX4 "cDNA FLJ61497, highly sim... 89 0.00084 2
>UNIPROTKB|A6QLW9 [details] [associations]
symbol:RFX2 "DNA-binding protein RFX2" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003150 InterPro:IPR007668
Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 eggNOG:NOG264634 GeneTree:ENSGT00550000074532
HOGENOM:HOG000294091 KO:K09173 EMBL:BC148113 IPI:IPI00715024
RefSeq:NP_001095642.1 UniGene:Bt.9918 ProteinModelPortal:A6QLW9
SMR:A6QLW9 Ensembl:ENSBTAT00000023492 GeneID:534475 KEGG:bta:534475
CTD:5990 OMA:SGAYLIH OrthoDB:EOG4RR6H0 NextBio:20876411
ArrayExpress:A6QLW9 Uniprot:A6QLW9
Length = 707
Score = 1014 (362.0 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 205/310 (66%), Positives = 238/310 (76%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNG-------DECEEEKYLSKSKLFCLSKCVP 268
+A LD ++ L F IE LW FW S+ +++G DE E L K KL L KC P
Sbjct: 383 EATLDVVMNLQFHYIEKLWLSFWNSKSSSDGPTSLPASDEEPEGAVLPKDKLVSLCKCDP 442
Query: 269 VQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMIN 328
V ++R D + YQ LVE+LIPDVLRP+P +LT +IRNFAK +E WLTNAM PQ++I
Sbjct: 443 VLRWMRTCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVIQ 502
Query: 329 IKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQ 388
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVCQ
Sbjct: 503 TKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 562
Query: 389 CDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSF 448
C+ +VQ+LE DFKLTLQQQ+SL++WA+WL NVV VLK G P+F KAARQFLLKWSF
Sbjct: 563 CEEGVVQRLEQDFKLTLQQQSSLDQWASWLDNVVTQVLKQHAGSPSFPKAARQFLLKWSF 622
Query: 449 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVE 508
YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G E N +
Sbjct: 623 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMG--EFNDLA 680
Query: 509 S-SQNPMDNG 517
S S +D G
Sbjct: 681 SLSLTLLDKG 690
Score = 345 (126.5 bits), Expect = 1.4e-35, Sum P(2) = 1.4e-35
Identities = 87/213 (40%), Positives = 112/213 (52%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGK------KYKLV-KTDSNSNQYGSEG-- 79
GNSKYHYYGIR+KPDSPLN + + + R + +Y+ KTDS + GS
Sbjct: 266 GNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPVHQKPRYRPAQKTDS-LGESGSHSSL 324
Query: 80 HTTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREH 139
H+T Q + QS +H D S+ P+FP DL L E T+ DV + YR H
Sbjct: 325 HSTPEQAMA---AQSQHHQQYIDVSHVFPEFPAPDLGSVLLQESITLHDVKALQLAYRRH 381
Query: 140 CEAFLDAIVTLDFSTIESLWREFWRSQDNNNG-------DECEEEKYLSKSKLFCLSKCV 192
CEA LD ++ L F IE LW FW S+ +++G DE E L K KL L KC
Sbjct: 382 CEATLDVVMNLQFHYIEKLWLSFWNSKSSSDGPTSLPASDEEPEGAVLPKDKLVSLCKCD 441
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL 225
PV ++R D + YQ LVE+LIPD TL
Sbjct: 442 PVLRWMRTCDHILYQALVEILIPDVLRPVPSTL 474
Score = 107 (42.7 bits), Expect = 1.6e-111, Sum P(2) = 1.6e-111
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 266 GNSKYHYYGIRLKPDSPLNRL 286
>UNIPROTKB|Q0V9K5 [details] [associations]
symbol:rfx3 "Transcription factor RFX3" species:8364
"Xenopus (Silurana) tropicalis" [GO:0006351 "transcription,
DNA-dependent" evidence=ISS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISS] [GO:0031018 "endocrine
pancreas development" evidence=ISS] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISS] [GO:0050796
"regulation of insulin secretion" evidence=ISS] [GO:0060285
"ciliary cell motility" evidence=ISS] [GO:0060287 "epithelial
cilium movement involved in determination of left/right asymmetry"
evidence=ISS] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 GO:GO:0005634 GO:GO:0030154
GO:GO:0006355 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0050796 GO:GO:0044212 GO:GO:0031018 GO:GO:0060285
GO:GO:0060287 HOVERGEN:HBG002753 EMBL:BC121500 UniGene:Str.54774
Xenbase:XB-GENE-1021689 Uniprot:Q0V9K5
Length = 749
Score = 1009 (360.2 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 209/339 (61%), Positives = 245/339 (72%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---------SQDNNNGDECEEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR S +G+ E E L KSKL K
Sbjct: 361 EAILDVVVNLQFSLIEKLWQTFWRYSPSSPADGSTITESGNLSEIESRLPKSKLILFCKN 420
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D + YQ+LVE+LIPDVLRPIP +LT ++RNFAK +E WL++AM PQ M
Sbjct: 421 ESIVKWMCNCDHMMYQSLVEILIPDVLRPIPSALTQAVRNFAKSLEGWLSSAMSNIPQRM 480
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML DLNRVDF NVQEQASWV
Sbjct: 481 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWV 540
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD S+VQ+LE+DFK+TLQQQ++LE+WA WL NVV LKP+EG+P+F KAARQFLLKW
Sbjct: 541 CQCDDSMVQRLETDFKMTLQQQSTLEQWAAWLDNVVTQALKPYEGRPSFPKAARQFLLKW 600
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGE+PIAV+G + N
Sbjct: 601 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGESPIAVMGEFGDLN 660
Query: 506 PVESSQNPMDNGLYAHGQNNILVHEELHISHAP--KRIK 542
D G + + EEL S P KR K
Sbjct: 661 DASPGNMEKDEGSDVESE----IEEELDDSVEPPAKREK 695
Score = 352 (129.0 bits), Expect = 1.2e-36, Sum P(2) = 1.2e-36
Identities = 83/204 (40%), Positives = 111/204 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D + + G +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVGDGFAGSGQS 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
A QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 GAS-VEQTVIAQSQHHQQFLDASRALPEFAEVEISS--LPDGTTFEDIKSLQSLYREHCE 361
Query: 142 AFLDAIVTLDFSTIESLWREFWR---------SQDNNNGDECEEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR S +G+ E E L KSKL K
Sbjct: 362 AILDVVVNLQFSLIEKLWQTFWRYSPSSPADGSTITESGNLSEIESRLPKSKLILFCKNE 421
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPD 216
+ ++ D + YQ+LVE+LIPD
Sbjct: 422 SIVKWMCNCDHMMYQSLVEILIPD 445
Score = 110 (43.8 bits), Expect = 2.7e-111, Sum P(2) = 2.7e-111
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
>UNIPROTKB|F1NC32 [details] [associations]
symbol:RFX3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0060285 "ciliary cell motility" evidence=IEA] [GO:0060287
"epithelial cilium movement involved in determination of left/right
asymmetry" evidence=IEA] [GO:0072560 "type B pancreatic cell
maturation" evidence=IEA] [GO:2000078 "positive regulation of type
B pancreatic cell development" evidence=IEA] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 GO:GO:0045892 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0050796 GO:GO:2000078 GO:GO:0060285
GeneTree:ENSGT00550000074532 OMA:MQTPEAG EMBL:AADN02068463
EMBL:AADN02068464 EMBL:AADN02068465 EMBL:AADN02068466
EMBL:AADN02068467 EMBL:AADN02068468 EMBL:AADN02068469
IPI:IPI00597315 Ensembl:ENSGALT00000016548 Uniprot:F1NC32
Length = 594
Score = 1004 (358.5 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 203/312 (65%), Positives = 235/312 (75%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQ-----DNNNGDE----CEEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR D +E E E L K+KL L K
Sbjct: 207 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPPDGTTVNEPSNLSEIESRLPKAKLITLCKN 266
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 267 ESILKWMCNCDHVMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 326
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML DLNRVDF NVQEQASWV
Sbjct: 327 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWV 386
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 387 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 446
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G + N
Sbjct: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLN 506
Query: 506 PVESSQNPMDNG 517
V D G
Sbjct: 507 AVSPGNMDKDEG 518
Score = 347 (127.2 bits), Expect = 1.0e-36, Sum P(2) = 1.0e-36
Identities = 92/237 (38%), Positives = 122/237 (51%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 88 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 147
Query: 82 TAGQTNSNPSPQSGNHN-FLG-DGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREH 139
T QS +H FL D S +P+F E+++S LP+ T ED+ + +S+YREH
Sbjct: 148 TGTSVEQTVIAQSQHHQQFLETDASRVLPEFGEVEISS--LPDGTTFEDIKSLQSLYREH 205
Query: 140 CEAFLDAIVTLDFSTIESLWREFWRSQ-----DNNNGDE----CEEEKYLSKSKLFCLSK 190
CEA LD +V L FS IE LW+ FWR D +E E E L K+KL L K
Sbjct: 206 CEAILDVVVNLQFSLIEKLWQTFWRYSPSTPPDGTTVNEPSNLSEIESRLPKAKLITLCK 265
Query: 191 CVPVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D + YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 266 NESILKWMCNCDHVMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 321
Score = 110 (43.8 bits), Expect = 9.0e-111, Sum P(2) = 9.0e-111
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 88 GNSKYHYYGIRVKPDSPLNRL 108
>MGI|MGI:106583 [details] [associations]
symbol:Rfx2 "regulatory factor X, 2 (influences HLA class II
expression)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589
PROSITE:PS51526 MGI:MGI:106583 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
eggNOG:NOG264634 GeneTree:ENSGT00550000074532 HOGENOM:HOG000294091
KO:K09173 HOVERGEN:HBG002753 CTD:5990 OMA:SGAYLIH OrthoDB:EOG4RR6H0
EMBL:X76089 EMBL:AK044439 EMBL:BC004654 IPI:IPI00406298
IPI:IPI00474946 PIR:C55926 RefSeq:NP_033082.1 RefSeq:NP_082063.1
UniGene:Mm.102 ProteinModelPortal:P48379 SMR:P48379 IntAct:P48379
STRING:P48379 PhosphoSite:P48379 PaxDb:P48379 PRIDE:P48379
Ensembl:ENSMUST00000002444 Ensembl:ENSMUST00000086801 GeneID:19725
KEGG:mmu:19725 UCSC:uc008ddf.2 UCSC:uc008ddg.2 InParanoid:Q8BXR3
NextBio:297132 Bgee:P48379 Genevestigator:P48379
GermOnline:ENSMUSG00000024206 Uniprot:P48379
Length = 717
Score = 1005 (358.8 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 201/302 (66%), Positives = 231/302 (76%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNN--------GDECEEEKYLSKSKLFCLSKCV 267
+A LD ++ L F IE LW FW + ++ DE E L K KL L KC
Sbjct: 373 EATLDVVMNLQFQYIEKLWLSFWNCKATSSDSCASLPASDEDPEVTLLPKEKLISLCKCE 432
Query: 268 PVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMI 327
P+ ++R D + YQ LVE LIPDVLRP+P SLT +IRNFAK +E WL NAM G PQ++I
Sbjct: 433 PILQWMRSCDHILYQTLVETLIPDVLRPVPSSLTQAIRNFAKSLEGWLINAMSGFPQQVI 492
Query: 328 NIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVC 387
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVC
Sbjct: 493 QTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVC 552
Query: 388 QCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWS 447
QC+ SLVQ+LE DFK+TLQQQ+SL++WA+WL NVV VLK G P+F KAARQFLLKWS
Sbjct: 553 QCEESLVQRLEHDFKVTLQQQSSLDQWASWLDNVVTQVLKQHSGSPSFPKAARQFLLKWS 612
Query: 448 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPV 507
FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G E N +
Sbjct: 613 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMG--EFNDL 670
Query: 508 ES 509
S
Sbjct: 671 AS 672
Score = 332 (121.9 bits), Expect = 5.8e-34, Sum P(2) = 5.8e-34
Identities = 79/203 (38%), Positives = 103/203 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YKLV-KTDSNSNQYGSEGHT 81
GNSKYHYYGIR+KPDSPLN + + P +K Y+ K+DS + GS
Sbjct: 256 GNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPTHQKPRYRPAQKSDSLGD--GSAHSN 313
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
G + + Q +H D S+ P+FP DL L E T+ DV + +YR HCE
Sbjct: 314 MHGMPDQAMATQGQHHQQYIDVSHVFPEFPAPDLGSTLLQESVTLHDVKALQLVYRRHCE 373
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNN--------GDECEEEKYLSKSKLFCLSKCVP 193
A LD ++ L F IE LW FW + ++ DE E L K KL L KC P
Sbjct: 374 ATLDVVMNLQFQYIEKLWLSFWNCKATSSDSCASLPASDEDPEVTLLPKEKLISLCKCEP 433
Query: 194 VQAFVRRVDFLFYQNLVEVLIPD 216
+ ++R D + YQ LVE LIPD
Sbjct: 434 ILQWMRSCDHILYQTLVETLIPD 456
Score = 107 (42.7 bits), Expect = 1.5e-110, Sum P(2) = 1.5e-110
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 256 GNSKYHYYGIRLKPDSPLNRL 276
>UNIPROTKB|P48380 [details] [associations]
symbol:RFX3 "Transcription factor RFX3" species:9606 "Homo
sapiens" [GO:0072560 "type B pancreatic cell maturation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IC] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0060285 "ciliary cell motility" evidence=ISS] [GO:0031018
"endocrine pancreas development" evidence=ISS] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0060287 "epithelial cilium movement involved in
determination of left/right asymmetry" evidence=ISS] [GO:0050796
"regulation of insulin secretion" evidence=ISS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0003677 "DNA
binding" evidence=TAS] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=NAS] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0005667 "transcription factor complex"
evidence=IC] [GO:0048469 "cell maturation" evidence=ISS]
[GO:0042384 "cilium assembly" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:2000078 "positive regulation of type B pancreatic
cell development" evidence=ISS] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0045892 GO:GO:0045944 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0050796 GO:GO:0005667 GO:GO:0003705 GO:GO:0044212
GO:GO:0000790 EMBL:CH471071 GO:GO:0042384 GO:GO:0031018
GO:GO:2000078 GO:GO:0048469 GO:GO:0060285 GO:GO:0060287
eggNOG:NOG264634 KO:K09173 GO:GO:0072560 HOVERGEN:HBG002753
EMBL:X76092 EMBL:AK289540 EMBL:AL365202 EMBL:AL133549 EMBL:AL354941
EMBL:BC022191 EMBL:BC067778 IPI:IPI00009298 IPI:IPI00102829
IPI:IPI00646621 PIR:D55926 RefSeq:NP_002910.1 RefSeq:NP_602304.1
UniGene:Hs.136829 ProteinModelPortal:P48380 SMR:P48380
IntAct:P48380 STRING:P48380 PhosphoSite:P48380 DMDM:32172437
PRIDE:P48380 Ensembl:ENST00000302303 Ensembl:ENST00000358730
Ensembl:ENST00000382004 GeneID:5991 KEGG:hsa:5991 UCSC:uc003zhr.3
UCSC:uc003zhs.1 UCSC:uc003zht.1 CTD:5991 GeneCards:GC09M003214
HGNC:HGNC:9984 HPA:HPA035689 MIM:601337 neXtProt:NX_P48380
PharmGKB:PA34354 InParanoid:P48380 OMA:MQTPEAG OrthoDB:EOG49ZXNR
PhylomeDB:P48380 GenomeRNAi:5991 NextBio:23335 ArrayExpress:P48380
Bgee:P48380 CleanEx:HS_RFX3 Genevestigator:P48380
GermOnline:ENSG00000080298 Uniprot:P48380
Length = 749
Score = 1000 (357.1 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 207/334 (61%), Positives = 242/334 (72%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 362 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKH 421
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 422 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 481
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWV
Sbjct: 482 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWV 541
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 542 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 601
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G + N
Sbjct: 602 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLN 661
Query: 506 PVESSQNPMDNGLYAHGQNNILVHEELHISHAPK 539
V D G + + EEL S P+
Sbjct: 662 AVSPGNLDKDEGSEVESE----MDEELDDSSEPQ 691
Score = 347 (127.2 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 362
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 363 AILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHE 422
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 423 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 476
Score = 110 (43.8 bits), Expect = 2.4e-110, Sum P(2) = 2.4e-110
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 351 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRL 410
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 411 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 470
Query: 419 KNVVNAV 425
N +N +
Sbjct: 471 SNAMNNI 477
>UNIPROTKB|E2R586 [details] [associations]
symbol:RFX2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GeneTree:ENSGT00550000074532 OMA:SGAYLIH
NextBio:20852345 EMBL:AAEX03012503 Ensembl:ENSCAFT00000029731
Uniprot:E2R586
Length = 744
Score = 1002 (357.8 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 202/302 (66%), Positives = 234/302 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQ-DNNNG-------DECEEEKYLSKSKLFCLSKCV 267
+A LD +V L F IE LW FW S+ + +G D E L K KL L KC
Sbjct: 400 EATLDVVVNLQFHYIEKLWLSFWNSKASSGDGPASLPASDGEPEGAVLPKDKLVSLCKCE 459
Query: 268 PVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMI 327
P+ ++R D + YQ LVE+LIPDVLRP+P +LT +IRNFAK +E WLTNAM+ PQ++I
Sbjct: 460 PILKWMRNCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMRDFPQQVI 519
Query: 328 NIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVC 387
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVC
Sbjct: 520 QTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVC 579
Query: 388 QCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWS 447
QC+ S+VQ+LE DFKLTLQQQ+SL++WA+WL NVV VLK G P+F KAARQFLLKWS
Sbjct: 580 QCEESVVQRLEQDFKLTLQQQSSLDQWASWLDNVVTQVLKQHAGSPSFPKAARQFLLKWS 639
Query: 448 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPV 507
FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G E N +
Sbjct: 640 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMG--EFNDL 697
Query: 508 ES 509
S
Sbjct: 698 AS 699
Score = 343 (125.8 bits), Expect = 3.2e-35, Sum P(2) = 3.2e-35
Identities = 88/214 (41%), Positives = 111/214 (51%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YKLV-KTDSNSNQYGSEG-- 79
GNSKYHYYGIR+KPDSPLN + + P +K Y+ KTDS + GS G
Sbjct: 283 GNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDS-GSHGSL 341
Query: 80 HTTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREH 139
H+T Q + QS +H D S+ P+FP DL L E T+ DV + +YR H
Sbjct: 342 HSTPEQAMA---AQSQHHQQYIDVSHVFPEFPAPDLGSVLLQESITLHDVKALQLVYRRH 398
Query: 140 CEAFLDAIVTLDFSTIESLWREFWRSQ-DNNNG-------DECEEEKYLSKSKLFCLSKC 191
CEA LD +V L F IE LW FW S+ + +G D E L K KL L KC
Sbjct: 399 CEATLDVVVNLQFHYIEKLWLSFWNSKASSGDGPASLPASDGEPEGAVLPKDKLVSLCKC 458
Query: 192 VPVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL 225
P+ ++R D + YQ LVE+LIPD TL
Sbjct: 459 EPILKWMRNCDHILYQALVEILIPDVLRPVPSTL 492
Score = 107 (42.7 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 283 GNSKYHYYGIRLKPDSPLNRL 303
>RGD|1588579 [details] [associations]
symbol:Rfx2 "regulatory factor X, 2 (influences HLA class II
expression)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 RGD:1588579 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 EMBL:CH474092 KO:K09173 CTD:5990 EMBL:BC166527
IPI:IPI00763175 RefSeq:NP_001100347.1 UniGene:Rn.35756
ProteinModelPortal:B2GV50 SMR:B2GV50 PRIDE:B2GV50 GeneID:301121
KEGG:rno:301121 NextBio:648184 Genevestigator:B2GV50 Uniprot:B2GV50
Length = 692
Score = 1002 (357.8 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 202/302 (66%), Positives = 233/302 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQ-DNNNG-------DECEEEKYLSKSKLFCLSKCV 267
+A LD ++ L F IE LW FW + +++G DE E L K KL L KC
Sbjct: 348 EATLDVVMNLQFQYIEKLWLSFWNCKATSSDGRASLPASDEEPEVTLLPKDKLISLCKCE 407
Query: 268 PVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMI 327
P+ ++R D + YQ LVE LIPDVLRP+P SLT +IRNFAK +E WL NAM G PQ++I
Sbjct: 408 PILQWMRSCDHILYQALVETLIPDVLRPVPSSLTQAIRNFAKSLEGWLINAMSGFPQQVI 467
Query: 328 NIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVC 387
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVC
Sbjct: 468 QTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVC 527
Query: 388 QCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWS 447
QC+ SLVQ+LE DFK+TLQQQ+SL++WA+WL NVV VLK G P+F KAARQFLLKWS
Sbjct: 528 QCEESLVQRLEHDFKVTLQQQSSLDQWASWLDNVVTQVLKQHAGSPSFPKAARQFLLKWS 587
Query: 448 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPV 507
FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G E N +
Sbjct: 588 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMG--EFNDL 645
Query: 508 ES 509
S
Sbjct: 646 AS 647
Score = 327 (120.2 bits), Expect = 1.9e-33, Sum P(2) = 1.9e-33
Identities = 75/202 (37%), Positives = 101/202 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKKYKLVKTDSNSNQYGSEGHTTAG 84
GNSKYHYYGIR+KPDSPLN + + P +K + + + H+
Sbjct: 231 GNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPTHQKPRYRPAQKSDSLGDGSAHSNMH 290
Query: 85 QTNSNPSPQSGNHN--FLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCEA 142
T G H+ ++ D S+ P+FP DL L E T+ DV + +YR HCEA
Sbjct: 291 STPEQAMAAQGQHHQQYI-DVSHVFPEFPAPDLGSTLLQESVTLHDVKALQLVYRRHCEA 349
Query: 143 FLDAIVTLDFSTIESLWREFWRSQ-DNNNG-------DECEEEKYLSKSKLFCLSKCVPV 194
LD ++ L F IE LW FW + +++G DE E L K KL L KC P+
Sbjct: 350 TLDVVMNLQFQYIEKLWLSFWNCKATSSDGRASLPASDEEPEVTLLPKDKLISLCKCEPI 409
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
++R D + YQ LVE LIPD
Sbjct: 410 LQWMRSCDHILYQALVETLIPD 431
Score = 107 (42.7 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 231 GNSKYHYYGIRLKPDSPLNRL 251
>UNIPROTKB|E2RAK6 [details] [associations]
symbol:RFX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000078 "positive regulation of type B
pancreatic cell development" evidence=IEA] [GO:0072560 "type B
pancreatic cell maturation" evidence=IEA] [GO:0060287 "epithelial
cilium movement involved in determination of left/right asymmetry"
evidence=IEA] [GO:0060285 "ciliary cell motility" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 GO:GO:0005634 GO:GO:0045892
GO:GO:0003677 GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 GO:GO:0050796 GO:GO:0042384
GO:GO:2000078 GO:GO:0060285 GO:GO:0060287
GeneTree:ENSGT00550000074532 KO:K09173 GO:GO:0072560 CTD:5991
EMBL:AAEX03000608 EMBL:AAEX03000609 EMBL:AAEX03000610
RefSeq:XP_533540.2 Ensembl:ENSCAFT00000003260 GeneID:476339
KEGG:cfa:476339 Uniprot:E2RAK6
Length = 749
Score = 999 (356.7 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 207/334 (61%), Positives = 241/334 (72%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 362 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKH 421
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 422 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 481
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML DLNRVDF NVQEQASWV
Sbjct: 482 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWV 541
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 542 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 601
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G + N
Sbjct: 602 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLN 661
Query: 506 PVESSQNPMDNGLYAHGQNNILVHEELHISHAPK 539
V D G + + EEL S P+
Sbjct: 662 AVSPGNLDKDEGSEVESE----MDEELDDSSEPQ 691
Score = 347 (127.2 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 362
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 363 AILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHE 422
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 423 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 476
Score = 110 (43.8 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 351 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRL 410
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 411 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 470
Query: 419 KNVVNAV 425
N +N +
Sbjct: 471 SNAMNNI 477
>UNIPROTKB|Q4R3I8 [details] [associations]
symbol:RFX3 "Transcription factor RFX3" species:9541
"Macaca fascicularis" [GO:0006351 "transcription, DNA-dependent"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0031018 "endocrine pancreas
development" evidence=ISS] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISS] [GO:0050796 "regulation of
insulin secretion" evidence=ISS] [GO:0060285 "ciliary cell
motility" evidence=ISS] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=ISS]
InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589
PROSITE:PS51526 GO:GO:0005634 GO:GO:0030154 GO:GO:0006355
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0050796
GO:GO:0044212 GO:GO:0031018 GO:GO:0060285 GO:GO:0060287
HOVERGEN:HBG002753 EMBL:AB179278 ProteinModelPortal:Q4R3I8
SMR:Q4R3I8 Uniprot:Q4R3I8
Length = 749
Score = 999 (356.7 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 207/334 (61%), Positives = 241/334 (72%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 362 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKH 421
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 422 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 481
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML DLNRVDF NVQEQASWV
Sbjct: 482 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWV 541
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 542 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 601
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G + N
Sbjct: 602 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGDLN 661
Query: 506 PVESSQNPMDNGLYAHGQNNILVHEELHISHAPK 539
V D G + + EEL S P+
Sbjct: 662 AVSPGNLDKDEGSEVESE----MDEELDDSSEPQ 691
Score = 347 (127.2 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 362
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 363 AILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHE 422
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 423 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 476
Score = 110 (43.8 bits), Expect = 3.0e-110, Sum P(2) = 3.0e-110
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 351 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRL 410
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 411 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 470
Query: 419 KNVVNAV 425
N +N +
Sbjct: 471 SNAMNNI 477
>MGI|MGI:106582 [details] [associations]
symbol:Rfx3 "regulatory factor X, 3 (influences HLA class II
expression)" species:10090 "Mus musculus" [GO:0000790 "nuclear
chromatin" evidence=ISO;IDA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005667 "transcription factor complex" evidence=IC] [GO:0006351
"transcription, DNA-dependent" evidence=IMP] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007368 "determination of left/right symmetry" evidence=IMP]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0031018
"endocrine pancreas development" evidence=IMP] [GO:0042384 "cilium
assembly" evidence=IMP] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO;IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IMP] [GO:0048469 "cell
maturation" evidence=IMP] [GO:0050796 "regulation of insulin
secretion" evidence=IMP] [GO:0060285 "ciliary cell motility"
evidence=IMP] [GO:0060287 "epithelial cilium movement involved in
determination of left/right asymmetry" evidence=IMP] [GO:0072560
"type B pancreatic cell maturation" evidence=IMP] [GO:2000078
"positive regulation of type B pancreatic cell development"
evidence=IMP] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 MGI:MGI:106582 GO:GO:0045892
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0050796 GO:GO:0005667 GO:GO:0044212
GO:GO:0000790 GO:GO:0042384 GO:GO:2000078 GO:GO:0060285
GO:GO:0060287 eggNOG:NOG264634 GeneTree:ENSGT00550000074532
HOGENOM:HOG000294091 KO:K09173 GO:GO:0072560 HOVERGEN:HBG002753
CTD:5991 OMA:MQTPEAG EMBL:AK030008 EMBL:AK041120 EMBL:BC017598
EMBL:X76090 IPI:IPI00121582 IPI:IPI00855166 PIR:E55926
RefSeq:NP_001159886.1 RefSeq:NP_035395.2 UniGene:Mm.313321
ProteinModelPortal:P48381 SMR:P48381 IntAct:P48381 STRING:P48381
PhosphoSite:P48381 PaxDb:P48381 PRIDE:P48381
Ensembl:ENSMUST00000165566 Ensembl:ENSMUST00000172907
Ensembl:ENSMUST00000174850 GeneID:19726 KEGG:mmu:19726
UCSC:uc008hcb.2 UCSC:uc008hcd.2 InParanoid:P48381 NextBio:297136
Bgee:P48381 Genevestigator:P48381 GermOnline:ENSMUSG00000040929
Uniprot:P48381
Length = 749
Score = 997 (356.0 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 205/334 (61%), Positives = 241/334 (72%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 362 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCKH 421
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 422 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 481
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWV
Sbjct: 482 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWV 541
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 542 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 601
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA TGETPIAV+G + N
Sbjct: 602 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQVTGETPIAVMGEFGDLN 661
Query: 506 PVESSQNPMDNGLYAHGQNNILVHEELHISHAPK 539
V D G + + E+L S P+
Sbjct: 662 AVSPGNLDKDEGSEVESETD----EDLDDSSEPR 691
Score = 349 (127.9 bits), Expect = 2.8e-36, Sum P(2) = 2.8e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 362
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 363 AILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCKHE 422
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 423 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 476
Score = 110 (43.8 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 351 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRL 410
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 411 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 470
Query: 419 KNVVNAV 425
N +N +
Sbjct: 471 SNAMNNI 477
>UNIPROTKB|J9P7V3 [details] [associations]
symbol:RFX3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GeneTree:ENSGT00550000074532 OMA:MQTPEAG
EMBL:AAEX03000608 EMBL:AAEX03000609 EMBL:AAEX03000610
Ensembl:ENSCAFT00000045303 Uniprot:J9P7V3
Length = 770
Score = 997 (356.0 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 201/308 (65%), Positives = 235/308 (76%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 362 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKH 421
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 422 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 481
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML DLNRVDF NVQEQASWV
Sbjct: 482 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWV 541
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 542 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 601
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNP 506
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G E+
Sbjct: 602 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMG--ETYL 659
Query: 507 VESSQNPM 514
V+ + P+
Sbjct: 660 VDEKKTPI 667
Score = 347 (127.2 bits), Expect = 5.9e-36, Sum P(2) = 5.9e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 362
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 363 AILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHE 422
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 423 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 476
Score = 110 (43.8 bits), Expect = 4.9e-110, Sum P(2) = 4.9e-110
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
Score = 57 (25.1 bits), Expect = 0.00094, Sum P(2) = 0.00094
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 351 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRL 410
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 411 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 470
Query: 419 KNVVNAV 425
N +N +
Sbjct: 471 SNAMNNI 477
>UNIPROTKB|D4A1I7 [details] [associations]
symbol:Rfx3 "RCG47137" species:10116 "Rattus norvegicus"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003150 InterPro:IPR007668
Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526 RGD:1307779 GO:GO:0005634
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0003700
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0050796
GO:GO:0042384 GO:GO:2000078 GO:GO:0060285 GO:GO:0060287
EMBL:CH473953 GO:GO:0072560 OMA:MQTPEAG OrthoDB:EOG49ZXNR
IPI:IPI00559128 UniGene:Rn.23347 Ensembl:ENSRNOT00000019515
Uniprot:D4A1I7
Length = 749
Score = 993 (354.6 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 201/312 (64%), Positives = 233/312 (74%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 362 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKH 421
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 422 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 481
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWV
Sbjct: 482 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWV 541
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 542 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 601
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA TGETPIAV+G + N
Sbjct: 602 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQVTGETPIAVMGEFGDLN 661
Query: 506 PVESSQNPMDNG 517
V D G
Sbjct: 662 AVSPGNLDKDEG 673
Score = 347 (127.2 bits), Expect = 5.1e-36, Sum P(2) = 5.1e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 304
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 305 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 362
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 363 AILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHE 422
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 423 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 476
Score = 110 (43.8 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 245 GNSKYHYYGIRVKPDSPLNRL 265
Score = 57 (25.1 bits), Expect = 0.00088, Sum P(2) = 0.00088
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 351 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRL 410
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 411 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 470
Query: 419 KNVVNAV 425
N +N +
Sbjct: 471 SNAMNNI 477
>UNIPROTKB|F1M313 [details] [associations]
symbol:Rfx3 "Protein Rfx3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 RGD:1307779
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
IPI:IPI00780570 Ensembl:ENSRNOT00000054768 ArrayExpress:F1M313
Uniprot:F1M313
Length = 587
Score = 993 (354.6 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 201/312 (64%), Positives = 233/312 (74%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 179 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKH 238
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 239 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 298
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWV
Sbjct: 299 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWV 358
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 359 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 418
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KESN 505
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA TGETPIAV+G + N
Sbjct: 419 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQVTGETPIAVMGEFGDLN 478
Query: 506 PVESSQNPMDNG 517
V D G
Sbjct: 479 AVSPGNLDKDEG 490
Score = 347 (127.2 bits), Expect = 9.0e-37, Sum P(2) = 9.0e-37
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 62 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 121
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 122 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 179
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 180 AILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRLPKAKLITLCKHE 239
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 240 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 293
Score = 110 (43.8 bits), Expect = 1.3e-109, Sum P(2) = 1.3e-109
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 62 GNSKYHYYGIRVKPDSPLNRL 82
Score = 57 (25.1 bits), Expect = 0.00048, Sum P(2) = 0.00048
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 168 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESSNLSEIESRL 227
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 228 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 287
Query: 419 KNVVNAV 425
N +N +
Sbjct: 288 SNAMNNI 294
>UNIPROTKB|F1MW17 [details] [associations]
symbol:RFX3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000078 "positive regulation of type B pancreatic cell
development" evidence=IEA] [GO:0072560 "type B pancreatic cell
maturation" evidence=IEA] [GO:0060287 "epithelial cilium movement
involved in determination of left/right asymmetry" evidence=IEA]
[GO:0060285 "ciliary cell motility" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0042384 "cilium assembly" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589
PROSITE:PS51526 GO:GO:0005634 GO:GO:0045892 GO:GO:0003677
GO:GO:0045944 GO:GO:0003700 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0050796 GO:GO:0042384 GO:GO:2000078
GO:GO:0060285 GO:GO:0060287 GeneTree:ENSGT00550000074532
GO:GO:0072560 OMA:MQTPEAG EMBL:DAAA02022730 EMBL:DAAA02022731
IPI:IPI00718282 Ensembl:ENSBTAT00000001085 Uniprot:F1MW17
Length = 713
Score = 990 (353.6 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 207/336 (61%), Positives = 241/336 (71%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKC 266
+A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 324 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCKH 383
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
+ ++ D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ M
Sbjct: 384 ESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRM 443
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
I KV AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML DLNRVDF NVQEQASWV
Sbjct: 444 IQTKVAAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLNDLNRVDFANVQEQASWV 503
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQCD ++VQ+LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 504 CQCDDNMVQRLETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 563
Query: 447 SFY--SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGS-KE 503
SFY SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G +
Sbjct: 564 SFYRNSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMGEFGD 623
Query: 504 SNPVESSQNPMDNGLYAHGQNNILVHEELHISHAPK 539
N V D G + + EEL S P+
Sbjct: 624 LNAVSPGNLDKDEGSEVESE----MDEELDDSSEPQ 655
Score = 349 (127.9 bits), Expect = 2.1e-36, Sum P(2) = 2.1e-36
Identities = 90/235 (38%), Positives = 119/235 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTDSNSNQYGSEGHT 81
GNSKYHYYGIRVKPDSPLN + + P +K YK + K D ++ + G
Sbjct: 207 GNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVDGVADGFTGSGQQ 266
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
T QS +H D S A+P+F E+++S LP+ T ED+ + +S+YREHCE
Sbjct: 267 TGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDIKSLQSLYREHCE 324
Query: 142 AFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC---------EEEKYLSKSKLFCLSKCV 192
A LD +V L FS IE LW+ FWR + D E E L K+KL L K
Sbjct: 325 AILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRLPKAKLITLCKHE 384
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWR--EFWRSQDNNN 245
+ ++ D YQ LVE+LIPD L I + I + + E W S NN
Sbjct: 385 SILKWMCNCDHGMYQALVEILIPDV-LRPIPSALTQAIRNFAKSLEGWLSNAMNN 438
Score = 110 (43.8 bits), Expect = 2.7e-109, Sum P(2) = 2.7e-109
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 207 GNSKYHYYGIRVKPDSPLNRL 227
Score = 57 (25.1 bits), Expect = 0.00078, Sum P(2) = 0.00078
Identities = 24/127 (18%), Positives = 45/127 (35%)
Query: 309 KGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQML 368
K ++S + ++N++ + + Q RY+ N ++I L
Sbjct: 313 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPADGTTITESSNLSEIESRL 372
Query: 369 TDLNRVDFHNVQEQASWVCQCD----ASLVQQLESDF------KLTLQQQNSLEEWANWL 418
+ + W+C CD +LV+ L D LT +N + WL
Sbjct: 373 PKAKLITLCKHESILKWMCNCDHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWL 432
Query: 419 KNVVNAV 425
N +N +
Sbjct: 433 SNAMNNI 439
>ZFIN|ZDB-GENE-050227-4 [details] [associations]
symbol:rfx2 "regulatory factor X, 2 (influences HLA
class II expression)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589
PROSITE:PS51526 ZFIN:ZDB-GENE-050227-4 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:BX664738 EMBL:CR450804
IPI:IPI00993889 Ensembl:ENSDART00000122943 ArrayExpress:E7F9V8
Bgee:E7F9V8 Uniprot:E7F9V8
Length = 738
Score = 986 (352.1 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 198/322 (61%), Positives = 240/322 (74%)
Query: 188 LSKCVPVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTLDFSTIESLWREFWRS----QDN 243
L C P+ + D Q+ + +A LD ++ L F IE LW+ FW S D
Sbjct: 359 LGSC-PLPESISMTDVKKLQSSYRIHC-EATLDVVMNLQFHLIEKLWQTFWHSTAPSSDG 416
Query: 244 -----NNGDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPG 298
N+ ++ E+ + + KL L K P++ ++R D + YQ LVE+LIPDVLRP+P
Sbjct: 417 ATTIPNSEEDVEDIRGFPRDKLITLCKYEPIKQWMRSCDHILYQALVEILIPDVLRPVPS 476
Query: 299 SLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVL 358
+LT +IRNFAK +E WLT+AM P E+I+ K V AFAQ LRRYTSLNHLAQAARAVL
Sbjct: 477 TLTQAIRNFAKSLEGWLTSAMTNFPPEIISTKAAVVSAFAQTLRRYTSLNHLAQAARAVL 536
Query: 359 QNSTQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQNSLEEWANWL 418
QN++QINQML+DLNRVDF NVQEQASWVCQCD S+VQ+LE DFK TLQQQ+SL++WA WL
Sbjct: 537 QNTSQINQMLSDLNRVDFANVQEQASWVCQCDESVVQRLELDFKATLQQQSSLDQWAAWL 596
Query: 419 KNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY 478
NVVN VLKP++G +F +AARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY
Sbjct: 597 DNVVNQVLKPYDGSLSFPRAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEY 656
Query: 479 MFYLIEHQVALATGETPIAVIG 500
MFYL+EH+VA ATGETPIAV+G
Sbjct: 657 MFYLVEHRVAQATGETPIAVMG 678
Score = 319 (117.4 bits), Expect = 3.2e-32, Sum P(2) = 3.2e-32
Identities = 76/213 (35%), Positives = 108/213 (50%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKKYKLV---KTDSNSNQYGSEGHT 81
GNSKYHYYGIR+KPDSPLN + + +P +K + K D + S
Sbjct: 266 GNSKYHYYGIRLKPDSPLNRMQEDTQYMAMRQTPVHQKQRFKPFHKMDGMGDSLNSGSQH 325
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCE 141
+ + + Q +H D S+ +P FP +DL LPE ++ DV +S YR HCE
Sbjct: 326 LSSTPEQSVAAQCQHHQQYIDVSHVLPPFPSLDLGSCPLPESISMTDVKKLQSSYRIHCE 385
Query: 142 AFLDAIVTLDFSTIESLWREFWRS----QDN-----NNGDECEEEKYLSKSKLFCLSKCV 192
A LD ++ L F IE LW+ FW S D N+ ++ E+ + + KL L K
Sbjct: 386 ATLDVVMNLQFHLIEKLWQTFWHSTAPSSDGATTIPNSEEDVEDIRGFPRDKLITLCKYE 445
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL 225
P++ ++R D + YQ LVE+LIPD TL
Sbjct: 446 PIKQWMRSCDHILYQALVEILIPDVLRPVPSTL 478
Score = 106 (42.4 bits), Expect = 1.9e-108, Sum P(2) = 1.9e-108
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 266 GNSKYHYYGIRLKPDSPLNRM 286
>UNIPROTKB|E2R2T9 [details] [associations]
symbol:RFX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589
PROSITE:PS51526 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GeneTree:ENSGT00550000074532
KO:K09173 CTD:5989 OMA:VPVQHVY EMBL:AAEX03012381 EMBL:AAEX03012382
RefSeq:XP_542024.2 Ensembl:ENSCAFT00000026160 GeneID:484908
KEGG:cfa:484908 NextBio:20858974 Uniprot:E2R2T9
Length = 973
Score = 1004 (358.5 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 201/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ N E EK L K+ L LSK PV
Sbjct: 611 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPKASLVLLSKFEPV 670
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 671 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 730
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 731 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 790
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 791 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFY 850
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 851 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLTT 908
Query: 510 SQNPMD 515
S NP+D
Sbjct: 909 SLNPLD 914
Score = 325 (119.5 bits), Expect = 3.1e-30, Sum P(2) = 3.1e-30
Identities = 79/202 (39%), Positives = 108/202 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDEN-----GSPRGKKYKLV---KTDSNSNQYGSEGH 80
GNSKYHYYG+R+K SPL + + D+ G P +K +L K + +N
Sbjct: 494 GNSKYHYYGLRIKASSPLLRL-MEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQ 552
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
G ++ + Q FL D S ++PDF E+DL LPE D+ F+ +YREHC
Sbjct: 553 QATGLSDISAQVQQ-YQQFL-DASRSLPDFSELDLQGKVLPEGVGPGDIKAFQVLYREHC 610
Query: 141 EAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 194
EA +D +V L F+ +E+LW+ FWR SQ N E EK L K+ L LSK PV
Sbjct: 611 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPKASLVLLSKFEPV 670
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
+ + D + YQ LVE+LIPD
Sbjct: 671 LQWTKHCDNVLYQGLVEILIPD 692
Score = 85 (35.0 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 1 GNSKYHYYGIRVKPDSPL 18
GNSKYHYYG+R+K SPL
Sbjct: 494 GNSKYHYYGLRIKASSPL 511
Score = 55 (24.4 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 23/104 (22%), Positives = 37/104 (35%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRG 60
G++ Y IR P PL + G S Y G + +P + ++ P
Sbjct: 297 GDASYTASAIR-SSTYPYPETPLYTQTAGTSYYEAAGTAAQVSTPATSQAVASSGSVPMY 355
Query: 61 KKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQSGNHNFLGDGS 104
V T S S+ G ++++G + G G GS
Sbjct: 356 VSGSQVVTSSTSSG-GGASNSSSGSSGGGGGGGGGGGGS-GGGS 397
Score = 41 (19.5 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 42 PDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQS 94
P +P + P SP ++Y +V SEG A +T S SP S
Sbjct: 75 PATPTPSQPAGAPTPSPASQQYIVVTV--------SEGAMRASETVSEASPGS 119
>UNIPROTKB|E2R585 [details] [associations]
symbol:RFX1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GeneTree:ENSGT00550000074532 EMBL:AAEX03012381
EMBL:AAEX03012382 Ensembl:ENSCAFT00000029732 NextBio:20852345
Uniprot:E2R585
Length = 966
Score = 1004 (358.5 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 201/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ N E EK L K+ L LSK PV
Sbjct: 611 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPKASLVLLSKFEPV 670
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 671 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 730
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 731 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 790
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 791 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFY 850
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 851 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLTT 908
Query: 510 SQNPMD 515
S NP+D
Sbjct: 909 SLNPLD 914
Score = 325 (119.5 bits), Expect = 3.0e-30, Sum P(2) = 3.0e-30
Identities = 79/202 (39%), Positives = 108/202 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDEN-----GSPRGKKYKLV---KTDSNSNQYGSEGH 80
GNSKYHYYG+R+K SPL + + D+ G P +K +L K + +N
Sbjct: 494 GNSKYHYYGLRIKASSPLLRL-MEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQ 552
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
G ++ + Q FL D S ++PDF E+DL LPE D+ F+ +YREHC
Sbjct: 553 QATGLSDISAQVQQ-YQQFL-DASRSLPDFSELDLQGKVLPEGVGPGDIKAFQVLYREHC 610
Query: 141 EAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 194
EA +D +V L F+ +E+LW+ FWR SQ N E EK L K+ L LSK PV
Sbjct: 611 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPKASLVLLSKFEPV 670
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
+ + D + YQ LVE+LIPD
Sbjct: 671 LQWTKHCDNVLYQGLVEILIPD 692
Score = 85 (35.0 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 1 GNSKYHYYGIRVKPDSPL 18
GNSKYHYYG+R+K SPL
Sbjct: 494 GNSKYHYYGLRIKASSPL 511
Score = 55 (24.4 bits), Expect = 5.8e-105, Sum P(2) = 5.8e-105
Identities = 23/104 (22%), Positives = 37/104 (35%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRG 60
G++ Y IR P PL + G S Y G + +P + ++ P
Sbjct: 297 GDASYTASAIR-SSTYPYPETPLYTQTAGTSYYEAAGTAAQVSTPATSQAVASSGSVPMY 355
Query: 61 KKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQSGNHNFLGDGS 104
V T S S+ G ++++G + G G GS
Sbjct: 356 VSGSQVVTSSTSSG-GGASNSSSGSSGGGGGGGGGGGGS-GGGS 397
Score = 41 (19.5 bits), Expect = 1.7e-103, Sum P(2) = 1.7e-103
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 42 PDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQS 94
P +P + P SP ++Y +V SEG A +T S SP S
Sbjct: 75 PATPTPSQPAGAPTPSPASQQYIVVTV--------SEGAMRASETVSEASPGS 119
>ZFIN|ZDB-GENE-061103-253 [details] [associations]
symbol:rfx3 "regulatory factor X, 3 (influences HLA
class II expression)" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;ISS] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS] [GO:0031018 "endocrine pancreas development"
evidence=ISS] [GO:0060287 "epithelial cilium movement involved in
determination of left/right asymmetry" evidence=ISS] [GO:0050796
"regulation of insulin secretion" evidence=ISS] [GO:0006351
"transcription, DNA-dependent" evidence=IEA;ISS] [GO:0060285
"ciliary cell motility" evidence=ISS] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
ZFIN:ZDB-GENE-061103-253 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GeneTree:ENSGT00550000074532
EMBL:CU468737 EMBL:CU570793 IPI:IPI00500453
Ensembl:ENSDART00000041236 Bgee:F1QI01 Uniprot:F1QI01
Length = 765
Score = 979 (349.7 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 195/294 (66%), Positives = 226/294 (76%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNN---------NGDECEEEKYLSKSKLFCLSKC 266
+A LD +V L F+ IE+LW+ FWR ++ N E E L +++L L +
Sbjct: 369 EAILDVVVNLQFNLIENLWQTFWRYSASSSVEGVTITENSGLSEIEGRLPRARLILLCRH 428
Query: 267 VPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEM 326
V ++ D L YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WLTNAM P M
Sbjct: 429 EAVHKWMNTCDHLMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLTNAMSSIPPRM 488
Query: 327 INIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWV 386
IN KV+AV AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWV
Sbjct: 489 INTKVSAVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWV 548
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
CQC+ +VQ+LE DFK TLQQQ+SLE+WA WL NVV +LKP+E KP KAARQFLLKW
Sbjct: 549 CQCEEGVVQRLEQDFKATLQQQSSLEQWAAWLDNVVTQILKPYEDKPTLPKAARQFLLKW 608
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIG 500
SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGET I V+G
Sbjct: 609 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETAIGVMG 662
Score = 323 (118.8 bits), Expect = 4.8e-33, Sum P(2) = 4.8e-33
Identities = 81/205 (39%), Positives = 110/205 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSP--RGKKYKLV-KTDSNS-NQYGSEGH 80
GNSKYHYYGIRVKPDSPLN + + P + +++K V K D S + + S G
Sbjct: 251 GNSKYHYYGIRVKPDSPLNRLQEDMQYMALRQQPVQQKQRFKPVQKMDGVSGDNFSSAGQ 310
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
T QS +H DGS A+P+F E+DL E + EDV +++YREHC
Sbjct: 311 HTPNAAEQTFIAQSQHHQQFLDGSRALPEFVELDLGEAV--DGVGPEDVKALQTLYREHC 368
Query: 141 EAFLDAIVTLDFSTIESLWREFWRSQDNN---------NGDECEEEKYLSKSKLFCLSKC 191
EA LD +V L F+ IE+LW+ FWR ++ N E E L +++L L +
Sbjct: 369 EAILDVVVNLQFNLIENLWQTFWRYSASSSVEGVTITENSGLSEIEGRLPRARLILLCRH 428
Query: 192 VPVQAFVRRVDFLFYQNLVEVLIPD 216
V ++ D L YQ LVE+LIPD
Sbjct: 429 EAVHKWMNTCDHLMYQALVEILIPD 453
Score = 110 (43.8 bits), Expect = 3.9e-108, Sum P(2) = 3.9e-108
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 251 GNSKYHYYGIRVKPDSPLNRL 271
>RGD|1306574 [details] [associations]
symbol:Rfx1 "regulatory factor X, 1 (influences HLA class II
expression)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 RGD:1306574 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:CH473972 GeneTree:ENSGT00550000074532 KO:K09173 CTD:5989
OMA:VPVQHVY OrthoDB:EOG4TB49X IPI:IPI00371646 RefSeq:NP_001099414.1
UniGene:Rn.154447 Ensembl:ENSRNOT00000008104 GeneID:288906
KEGG:rno:288906 NextBio:628933 Uniprot:D3ZQ82
Length = 964
Score = 1001 (357.4 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 200/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ N E EK L ++ L LSK PV
Sbjct: 602 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPRASLVLLSKFQPV 661
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 662 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 721
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 722 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 781
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 782 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFY 841
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 842 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLAT 899
Query: 510 SQNPMD 515
S NP+D
Sbjct: 900 SLNPLD 905
Score = 324 (119.1 bits), Expect = 3.9e-30, Sum P(2) = 3.9e-30
Identities = 76/199 (38%), Positives = 106/199 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKY-KLVKTDSNSNQYGSEGHTTAGQTN 87
GNSKYHYYG+R+K SPL + ++ + RG+ + + + G GQ +
Sbjct: 486 GNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGVANGVAVGQQS 545
Query: 88 SNPSPQSGN----HNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCEAF 143
+ S S FL D S ++PDF E+DL LPE D+ F+ +YREHCEA
Sbjct: 546 TGLSDISAQVQQYQQFL-DASRSLPDFAELDLQGKVLPEGVGPGDIKAFQVLYREHCEAI 604
Query: 144 LDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPVQAF 197
+D +V L F+ +E+LW+ FWR SQ N E EK L ++ L LSK PV +
Sbjct: 605 VDVMVNLQFTLVETLWKTFWRYNLSQPNEAPPLAVHDEAEKRLPRASLVLLSKFQPVLQW 664
Query: 198 VRRVDFLFYQNLVEVLIPD 216
+ D + YQ LVE+LIPD
Sbjct: 665 TKHCDNVLYQGLVEILIPD 683
Score = 85 (35.0 bits), Expect = 8.1e-108, Sum P(2) = 8.1e-108
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 1 GNSKYHYYGIRVKPDSPL 18
GNSKYHYYG+R+K SPL
Sbjct: 486 GNSKYHYYGLRIKASSPL 503
Score = 55 (24.4 bits), Expect = 1.2e-104, Sum P(2) = 1.2e-104
Identities = 16/85 (18%), Positives = 29/85 (34%)
Query: 22 PLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
P+ + G S Y G + +P + ++ P + S+S++ G+ +
Sbjct: 312 PIYTQTAGTSYYEASGTAAQVSTPATSQTVASSGSVPMYVSGSPIVASSSSSEAGASNSS 371
Query: 82 TAGQTNSNPSPQSGNHNFLGDGSNA 106
N G G GS A
Sbjct: 372 VGAGGNGGGGSGGGGGGSSGGGSGA 396
Score = 37 (18.1 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 77 SEGHTTAGQTNSNPSPQS 94
SEG A +T S SP S
Sbjct: 99 SEGAMRASETVSEASPSS 116
>UNIPROTKB|E1BSB3 [details] [associations]
symbol:RFX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003150 InterPro:IPR007668
Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 KO:K09173 CTD:5990 OMA:SGAYLIH
EMBL:AADN02072209 EMBL:AADN02072210 IPI:IPI00588661
RefSeq:XP_418212.3 Ensembl:ENSGALT00000002724 GeneID:420092
KEGG:gga:420092 Uniprot:E1BSB3
Length = 725
Score = 982 (350.7 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 194/292 (66%), Positives = 227/292 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR----SQDNNNGDECEEEKY---LSKSKLFCLSKCVP 268
+A LD ++ L F IE LW+ FW S D + EE++ L K KL L K P
Sbjct: 383 EATLDVVMNLQFHYIEKLWQSFWSPKTPSSDGSAALPSSEEEHEGTLPKDKLITLCKYEP 442
Query: 269 VQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMIN 328
+ ++R D + YQ LVE+LIPDVLRP+P +LT +IRNFAK +E WL NAM P +++
Sbjct: 443 ILKWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLMNAMSEFPPQIVQ 502
Query: 329 IKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQ 388
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVCQ
Sbjct: 503 TKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 562
Query: 389 CDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSF 448
C+ +VQ+LE DFKLTLQQQ+SL++WA+WL NVV VLK EG P+F KAARQFLLKWSF
Sbjct: 563 CEEGMVQKLEQDFKLTLQQQSSLDQWASWLDNVVTQVLKHHEGSPSFPKAARQFLLKWSF 622
Query: 449 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIG 500
YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G
Sbjct: 623 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMG 674
Score = 324 (119.1 bits), Expect = 1.5e-32, Sum P(2) = 1.5e-32
Identities = 80/212 (37%), Positives = 110/212 (51%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGK------KYKLVKTDSNSNQYGSEG--H 80
GNSKYHYYGIR+KP+SPLN + + + R + +Y+ + + GS H
Sbjct: 266 GNSKYHYYGIRLKPESPLNRLQEDTQYMAMRQQPIHQKQRYRPAQKMDGMAEAGSNSSLH 325
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
TT Q+ + QS +H D ++ P+FP DL L E T+ DV T + +YR HC
Sbjct: 326 TTPEQS---VAAQSQHHQQFIDVTHVFPEFPAPDLGNVLLQEGVTMNDVKTLQLLYRRHC 382
Query: 141 EAFLDAIVTLDFSTIESLWREFWR----SQDNNNGDECEEEKY---LSKSKLFCLSKCVP 193
EA LD ++ L F IE LW+ FW S D + EE++ L K KL L K P
Sbjct: 383 EATLDVVMNLQFHYIEKLWQSFWSPKTPSSDGSAALPSSEEEHEGTLPKDKLITLCKYEP 442
Query: 194 VQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL 225
+ ++R D + YQ LVE+LIPD TL
Sbjct: 443 ILKWMRSCDHILYQALVEILIPDVLRPVPSTL 474
Score = 103 (41.3 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 17/21 (80%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KP+SPLN +
Sbjct: 266 GNSKYHYYGIRLKPESPLNRL 286
>UNIPROTKB|E1BVZ9 [details] [associations]
symbol:RFX2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003150 InterPro:IPR007668
Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:AADN02072209 EMBL:AADN02072210
IPI:IPI00822713 Ensembl:ENSGALT00000041242 Uniprot:E1BVZ9
Length = 695
Score = 982 (350.7 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 194/292 (66%), Positives = 227/292 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR----SQDNNNGDECEEEKY---LSKSKLFCLSKCVP 268
+A LD ++ L F IE LW+ FW S D + EE++ L K KL L K P
Sbjct: 353 EATLDVVMNLQFHYIEKLWQSFWSPKTPSSDGSAALPSSEEEHEGTLPKDKLITLCKYEP 412
Query: 269 VQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMIN 328
+ ++R D + YQ LVE+LIPDVLRP+P +LT +IRNFAK +E WL NAM P +++
Sbjct: 413 ILKWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLMNAMSEFPPQIVQ 472
Query: 329 IKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQ 388
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVCQ
Sbjct: 473 TKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQ 532
Query: 389 CDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSF 448
C+ +VQ+LE DFKLTLQQQ+SL++WA+WL NVV VLK EG P+F KAARQFLLKWSF
Sbjct: 533 CEEGMVQKLEQDFKLTLQQQSSLDQWASWLDNVVTQVLKHHEGSPSFPKAARQFLLKWSF 592
Query: 449 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIG 500
YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G
Sbjct: 593 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAQATGETPIAVMG 644
Score = 324 (119.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 80/212 (37%), Positives = 110/212 (51%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGK------KYKLVKTDSNSNQYGSEG--H 80
GNSKYHYYGIR+KP+SPLN + + + R + +Y+ + + GS H
Sbjct: 236 GNSKYHYYGIRLKPESPLNRLQEDTQYMAMRQQPIHQKQRYRPAQKMDGMAEAGSNSSLH 295
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
TT Q+ + QS +H D ++ P+FP DL L E T+ DV T + +YR HC
Sbjct: 296 TTPEQS---VAAQSQHHQQFIDVTHVFPEFPAPDLGNVLLQEGVTMNDVKTLQLLYRRHC 352
Query: 141 EAFLDAIVTLDFSTIESLWREFWR----SQDNNNGDECEEEKY---LSKSKLFCLSKCVP 193
EA LD ++ L F IE LW+ FW S D + EE++ L K KL L K P
Sbjct: 353 EATLDVVMNLQFHYIEKLWQSFWSPKTPSSDGSAALPSSEEEHEGTLPKDKLITLCKYEP 412
Query: 194 VQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL 225
+ ++R D + YQ LVE+LIPD TL
Sbjct: 413 ILKWMRSCDHILYQALVEILIPDVLRPVPSTL 444
Score = 103 (41.3 bits), Expect = 1.0e-107, Sum P(2) = 1.0e-107
Identities = 17/21 (80%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KP+SPLN +
Sbjct: 236 GNSKYHYYGIRLKPESPLNRL 256
>UNIPROTKB|F1SD60 [details] [associations]
symbol:RFX1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GeneTree:ENSGT00550000074532 KO:K09173 CTD:5989
OMA:VPVQHVY EMBL:FP016000 RefSeq:XP_003123399.1 UniGene:Ssc.24320
Ensembl:ENSSSCT00000015038 GeneID:100511439 KEGG:ssc:100511439
Uniprot:F1SD60
Length = 973
Score = 999 (356.7 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 200/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 611 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPV 670
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 671 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 730
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 731 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 790
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 791 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFY 850
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 851 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLAT 908
Query: 510 SQNPMD 515
S NP+D
Sbjct: 909 SLNPLD 914
Score = 320 (117.7 bits), Expect = 1.2e-29, Sum P(2) = 1.2e-29
Identities = 78/202 (38%), Positives = 108/202 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDEN-----GSPRGKKYKLV---KTDSNSNQYGSEGH 80
GNSKYHYYG+R+K SPL + + D+ G P +K +L K + +N
Sbjct: 494 GNSKYHYYGLRIKASSPLLRL-MEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGPQ 552
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
G ++ + Q FL D S ++PDF E+DL LPE D+ F+ +YREHC
Sbjct: 553 QATGLSDISAQVQQ-YQQFL-DASRSLPDFSELDLQGKVLPEGVGPGDIKAFQVLYREHC 610
Query: 141 EAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 194
EA +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 611 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPV 670
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
+ + D + YQ LVE+LIPD
Sbjct: 671 LQWTKHCDNVLYQGLVEILIPD 692
Score = 85 (35.0 bits), Expect = 1.3e-107, Sum P(2) = 1.3e-107
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 1 GNSKYHYYGIRVKPDSPL 18
GNSKYHYYG+R+K SPL
Sbjct: 494 GNSKYHYYGLRIKASSPL 511
Score = 39 (18.8 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 14/54 (25%), Positives = 24/54 (44%)
Query: 42 PDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQSG 95
P L L ++ +P GK ++ T ++ Q S + Q NS+ S +G
Sbjct: 169 PQQALPTQRLVVQSTAPGGKGGQVSLTVHSTQQVHSPPERSPVQANSSSSKTAG 222
>UNIPROTKB|P22670 [details] [associations]
symbol:RFX1 "MHC class II regulatory factor RFX1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=TAS] [GO:0006955 "immune response" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0005634 GO:GO:0006955 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003705 EMBL:AC022098 eggNOG:NOG264634
HOGENOM:HOG000294091 KO:K09173 EMBL:AC020916 EMBL:X58964
EMBL:BC049826 IPI:IPI00305337 PIR:A35913 RefSeq:NP_002909.4
UniGene:Hs.655215 PDB:1DP7 PDBsum:1DP7 ProteinModelPortal:P22670
SMR:P22670 IntAct:P22670 MINT:MINT-1186898 STRING:P22670
PhosphoSite:P22670 DMDM:288558824 PaxDb:P22670 PRIDE:P22670
Ensembl:ENST00000254325 GeneID:5989 KEGG:hsa:5989 UCSC:uc002mxv.3
CTD:5989 GeneCards:GC19M014072 H-InvDB:HIX0027643 HGNC:HGNC:9982
HPA:HPA048722 MIM:600006 neXtProt:NX_P22670 PharmGKB:PA34352
HOVERGEN:HBG002753 InParanoid:P22670 OMA:VPVQHVY OrthoDB:EOG4TB49X
PhylomeDB:P22670 EvolutionaryTrace:P22670 GenomeRNAi:5989
NextBio:23325 Bgee:P22670 CleanEx:HS_RFX1 Genevestigator:P22670
GermOnline:ENSG00000132005 Uniprot:P22670
Length = 979
Score = 996 (355.7 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 200/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 617 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSKFEPV 676
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 677 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 736
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 737 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 796
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 797 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSAGFPKAAKLFLLKWSFY 856
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 857 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLAT 914
Query: 510 SQNPMD 515
S NP+D
Sbjct: 915 SLNPLD 920
Score = 318 (117.0 bits), Expect = 2.1e-29, Sum P(2) = 2.1e-29
Identities = 78/202 (38%), Positives = 109/202 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDEN-----GSPRGKKYKLV---KTDSNSNQYGSEGH 80
GNSKYHYYG+R+K SPL + + D+ G P +K +L K + +N
Sbjct: 500 GNSKYHYYGLRIKASSPLLRL-MEDQQHMAMRGQPFSQKQRLKPIQKMEGMTNGVAVGQQ 558
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
+ G ++ + Q FL D S ++PDF E+DL LPE D+ F+ +YREHC
Sbjct: 559 PSTGLSDISAQVQQ-YQQFL-DASRSLPDFTELDLQGKVLPEGVGPGDIKAFQVLYREHC 616
Query: 141 EAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 194
EA +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 617 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKAILVLLSKFEPV 676
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
+ + D + YQ LVE+LIPD
Sbjct: 677 LQWTKHCDNVLYQGLVEILIPD 698
Score = 85 (35.0 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 1 GNSKYHYYGIRVKPDSPL 18
GNSKYHYYG+R+K SPL
Sbjct: 500 GNSKYHYYGLRIKASSPL 517
Score = 43 (20.2 bits), Expect = 7.4e-103, Sum P(2) = 7.4e-103
Identities = 25/103 (24%), Positives = 35/103 (33%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRG 60
G++ Y IR S PL + S Y G + +P + ++ P
Sbjct: 301 GDASYTASAIRSSTYS-YPETPLYTQTASTSYYEAAGTATQVSTPATSQAVASSGSMPM- 358
Query: 61 KKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQSGNHNFLGDG 103
Y S S S T AG +NS+ SG G G
Sbjct: 359 --YV-----SGSQVVASSTSTGAGASNSSGGGGSGGGGGGGGG 394
Score = 42 (19.8 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 20/73 (27%), Positives = 28/73 (38%)
Query: 22 PLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
P + GG +Y + P P + P SP ++Y +V SEG
Sbjct: 63 PQAQPPGGQKQY----VTELPAVPAPSQPTGAPTPSPAPQQYIVVTV--------SEGAM 110
Query: 82 TAGQTNSNPSPQS 94
A +T S SP S
Sbjct: 111 RASETVSEASPGS 123
>MGI|MGI:105982 [details] [associations]
symbol:Rfx1 "regulatory factor X, 1 (influences HLA class II
expression)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589
PROSITE:PS51526 MGI:MGI:105982 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
EMBL:CH466525 eggNOG:NOG264634 GeneTree:ENSGT00550000074532
HOGENOM:HOG000294091 KO:K09173 CTD:5989 HOVERGEN:HBG002753
OMA:VPVQHVY OrthoDB:EOG4TB49X EMBL:X76088 EMBL:BC057018
IPI:IPI00308601 PIR:A55926 RefSeq:NP_033081.3 UniGene:Mm.7892
ProteinModelPortal:P48377 SMR:P48377 STRING:P48377
PhosphoSite:P48377 PaxDb:P48377 PRIDE:P48377
Ensembl:ENSMUST00000005600 GeneID:19724 KEGG:mmu:19724
InParanoid:Q6PGH8 ChiTaRS:RFX1 NextBio:297128 Bgee:P48377
Genevestigator:P48377 GermOnline:ENSMUSG00000031706 Uniprot:P48377
Length = 963
Score = 996 (355.7 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 199/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ + E EK L ++ L LSK PV
Sbjct: 601 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPRASLVLLSKFQPV 660
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 661 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 720
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 721 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 780
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 781 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSSGFPKAAKLFLLKWSFY 840
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 841 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLAT 898
Query: 510 SQNPMD 515
S NP+D
Sbjct: 899 SLNPLD 904
Score = 319 (117.4 bits), Expect = 1.5e-29, Sum P(2) = 1.5e-29
Identities = 75/199 (37%), Positives = 106/199 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKY-KLVKTDSNSNQYGSEGHTTAGQTN 87
GNSKYHYYG+R+K SPL + ++ + RG+ + + + G GQ +
Sbjct: 485 GNSKYHYYGLRIKASSPLLRLMEDQQHMAMRGQPFSQKQRLKPIQKMEGVANGVAVGQQS 544
Query: 88 SNPSPQSGN----HNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCEAF 143
+ S S FL D S ++PDF E+DL LPE D+ F+ +YREHCEA
Sbjct: 545 TGLSDISAQVQQYQQFL-DASRSLPDFAELDLQGKVLPEGVGPGDIKAFQVLYREHCEAI 603
Query: 144 LDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPVQAF 197
+D +V L F+ +E+LW+ FWR SQ + E EK L ++ L LSK PV +
Sbjct: 604 VDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPRASLVLLSKFQPVLQW 663
Query: 198 VRRVDFLFYQNLVEVLIPD 216
+ D + YQ LVE+LIPD
Sbjct: 664 TKHCDNVLYQGLVEILIPD 682
Score = 85 (35.0 bits), Expect = 2.7e-107, Sum P(2) = 2.7e-107
Identities = 14/18 (77%), Positives = 16/18 (88%)
Query: 1 GNSKYHYYGIRVKPDSPL 18
GNSKYHYYG+R+K SPL
Sbjct: 485 GNSKYHYYGLRIKASSPL 502
Score = 37 (18.1 bits), Expect = 3.2e-102, Sum P(2) = 3.2e-102
Identities = 9/18 (50%), Positives = 10/18 (55%)
Query: 77 SEGHTTAGQTNSNPSPQS 94
SEG A +T S SP S
Sbjct: 99 SEGAMRASETVSEASPSS 116
>ZFIN|ZDB-GENE-070424-94 [details] [associations]
symbol:rfx1a "regulatory factor X, 1a (influences
HLA class II expression)" species:7955 "Danio rerio" [GO:0003677
"DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 ZFIN:ZDB-GENE-070424-94 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:BX546473 IPI:IPI00994546
Ensembl:ENSDART00000129205 Uniprot:E7EZ03
Length = 908
Score = 999 (356.7 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
Identities = 201/306 (65%), Positives = 233/306 (76%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC------EEEKYLSKSKLFCLSKCVPV 269
+A LD +V L F +E+LW+ FWR +N GD E EK L K+ L L K PV
Sbjct: 549 EAILDVMVNLQFPLVETLWKTFWRFSENQAGDSATLAVHDESEKRLPKTCLVILCKYEPV 608
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ R D YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLTNAM P+EM+ +
Sbjct: 609 LRWSRDCDNTLYQGLVEMLIPDVLRPIPSALTQAIRNFAKSLESWLTNAMVNIPEEMVRV 668
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KVT+ AFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 669 KVTSASAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 728
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFKLTLQQQNSLE+WA WL VV+ VLKP++ KAA+ FLLKWSFY
Sbjct: 729 EDRVVQRLEQDFKLTLQQQNSLEQWAAWLDGVVSQVLKPYQSSAALPKAAKLFLLKWSFY 788
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G S +
Sbjct: 789 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMGEFAS--LGR 846
Query: 510 SQNPMD 515
S NP+D
Sbjct: 847 SLNPLD 852
Score = 327 (120.2 bits), Expect = 2.3e-26, P = 2.3e-26
Identities = 80/206 (38%), Positives = 110/206 (53%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG-----SPRGKKYKL-----VKTDSNSNQYGSE 78
GNSKYHYYG+R+K S L + + D+ P +K +L V+ +N GS
Sbjct: 426 GNSKYHYYGLRIKASSSLLRL-MEDQQHLAMRQQPFSQKQRLKPVQKVEGITNGMSSGSG 484
Query: 79 GHTTAGQTN--SNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIY 136
Q++ S+ S Q + D S A+P+FP++DL LPE +E + +F+ +Y
Sbjct: 485 QQQQQQQSSGLSDISTQVQQYQQFLDASKALPEFPDVDLQGKALPEGIELEHLKSFQLLY 544
Query: 137 REHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDEC------EEEKYLSKSKLFCLSK 190
REHCEA LD +V L F +E+LW+ FWR +N GD E EK L K+ L L K
Sbjct: 545 REHCEAILDVMVNLQFPLVETLWKTFWRFSENQAGDSATLAVHDESEKRLPKTCLVILCK 604
Query: 191 CVPVQAFVRRVDFLFYQNLVEVLIPD 216
PV + R D YQ LVE+LIPD
Sbjct: 605 YEPVLRWSRDCDNTLYQGLVEMLIPD 630
Score = 78 (32.5 bits), Expect = 7.2e-107, Sum P(2) = 7.2e-107
Identities = 20/59 (33%), Positives = 30/59 (50%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGI--RVKPDSPLNNIPLSDENGS 57
GNSKYHYYG+R+K S L + + D+ + + R+KP + I +GS
Sbjct: 426 GNSKYHYYGLRIKASSSLLRL-MEDQQHLAMRQQPFSQKQRLKPVQKVEGITNGMSSGS 483
>ZFIN|ZDB-GENE-041008-101 [details] [associations]
symbol:rfx1b "regulatory factor X, 1b (influences
HLA class II expression)" species:7955 "Danio rerio" [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 ZFIN:ZDB-GENE-041008-101 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:AL929114 IPI:IPI01024055
Ensembl:ENSDART00000148382 ArrayExpress:F8W388 Uniprot:F8W388
Length = 829
Score = 971 (346.9 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 199/306 (65%), Positives = 227/306 (74%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDN--NNGDEC----EEEKYLSKSKLFCLSKCVPV 269
+A LD +V L F+ +E+LW+ FWR + +N D E EK L KS L L K P+
Sbjct: 472 EAILDVMVNLQFTLVETLWKSFWRFSEGQTSNSDALDLHEESEKRLPKSVLVLLCKYEPI 531
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ R D L YQ+LV + IPDVLRPIP +LT +IRNFAK +ESWL+NAM P EM+NI
Sbjct: 532 INWTRECDNLLYQSLVGIFIPDVLRPIPSALTQAIRNFAKSLESWLSNAMIIMPDEMVNI 591
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
K GAFAQ LRRYTSLNHLAQAARAVLQN+ QI QML+DLNRVDF NVQEQASWVC C
Sbjct: 592 KKLCAGAFAQTLRRYTSLNHLAQAARAVLQNTAQITQMLSDLNRVDFTNVQEQASWVCGC 651
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQQLE DFK TLQ QNSLEEWA WL VV+ VLKP+ P F KAA+ FLLKWSFY
Sbjct: 652 EDGVVQQLERDFKQTLQNQNSLEEWAAWLNEVVSLVLKPYTNSPAFPKAAKLFLLKWSFY 711
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+ E +
Sbjct: 712 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMA--EFANLNR 769
Query: 510 SQNPMD 515
SQ MD
Sbjct: 770 SQRSMD 775
Score = 313 (115.2 bits), Expect = 7.2e-25, P = 7.2e-25
Identities = 74/202 (36%), Positives = 106/202 (52%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYK-------LVKTDSNSNQYG-SEGH 80
GNSKYHYYG+R+K +SPL+ + ++ + R + Y + K + +N G GH
Sbjct: 353 GNSKYHYYGLRIKSNSPLHRLVEDQQHLAMRQQPYSQKQRIKPVQKMEGLTNGMGLGAGH 412
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
+ S FLGD S +P+FPE+ LP+ + V ++ +YREHC
Sbjct: 413 QQGAGLSDISSQVHQYQQFLGD-SRRLPEFPELKDDGKSLPDGLLPQYVHVYQLVYREHC 471
Query: 141 EAFLDAIVTLDFSTIESLWREFWRSQDN--NNGDEC----EEEKYLSKSKLFCLSKCVPV 194
EA LD +V L F+ +E+LW+ FWR + +N D E EK L KS L L K P+
Sbjct: 472 EAILDVMVNLQFTLVETLWKSFWRFSEGQTSNSDALDLHEESEKRLPKSVLVLLCKYEPI 531
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
+ R D L YQ+LV + IPD
Sbjct: 532 INWTRECDNLLYQSLVGIFIPD 553
Score = 92 (37.4 bits), Expect = 2.2e-105, Sum P(2) = 2.2e-105
Identities = 24/77 (31%), Positives = 38/77 (49%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGI--RVKPDSPLNNIPLSDENGSP 58
GNSKYHYYG+R+K +SPL+ + + D+ + Y R+KP + + G+
Sbjct: 353 GNSKYHYYGLRIKSNSPLHRL-VEDQQHLAMRQQPYSQKQRIKPVQKMEGLTNGMGLGAG 411
Query: 59 RGKKYKLVKTDSNSNQY 75
+ L S +QY
Sbjct: 412 HQQGAGLSDISSQVHQY 428
>FB|FBgn0020379 [details] [associations]
symbol:Rfx "Rfx" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=NAS] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;TAS] [GO:0048813 "dendrite
morphogenesis" evidence=TAS] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 EMBL:AE014297 GO:GO:0006355 GO:GO:0043565
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0048813 GO:GO:0007605
eggNOG:NOG264634 GeneTree:ENSGT00550000074532 KO:K09173
RefSeq:NP_001097738.1 UniGene:Dm.3010 ProteinModelPortal:A8JQX0
SMR:A8JQX0 STRING:A8JQX0 EnsemblMetazoa:FBtr0112895 GeneID:41266
KEGG:dme:Dmel_CG6312 UCSC:CG6312-RB CTD:41266 FlyBase:FBgn0020379
OrthoDB:EOG4SJ3VT PhylomeDB:A8JQX0 GenomeRNAi:41266 NextBio:823000
Bgee:A8JQX0 Uniprot:A8JQX0
Length = 1079
Score = 1035 (369.4 bits), Expect = 1.6e-104, P = 1.6e-104
Identities = 192/284 (67%), Positives = 237/284 (83%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVPVQAFVRR 275
++FLDA++ L+F+T+E L R+FWR+ DNNN DECEEEKYLSK+KL+ L C VQ FVR
Sbjct: 748 ESFLDAVLNLEFNTVEFLLRDFWRASDNNNLDECEEEKYLSKTKLYLLCHCAEVQKFVRE 807
Query: 276 VDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVG 335
VD+ FYQN V+V+IPDVLR IP +LT +IRNFAK +E WL +M G P+++ IK +AV
Sbjct: 808 VDYQFYQNTVDVIIPDVLRSIPNALTQAIRNFAKNLEIWLCESMLGVPEQLAQIKTSAVS 867
Query: 336 AFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQ 395
AF Q LRRYTSLNHLAQAARAVLQN QI+QML+DLNRVDFHNVQEQA+WV QC ++VQ
Sbjct: 868 AFCQTLRRYTSLNHLAQAARAVLQNGAQISQMLSDLNRVDFHNVQEQAAWVSQCAPAVVQ 927
Query: 396 QLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIR 455
+LESDFK LQQQ+SLE+WA+WL+ VV + ++ + GKP + +AARQFLLKWSFYSSM+IR
Sbjct: 928 RLESDFKAALQQQSSLEQWASWLQLVVESAMEEYNGKPTYARAARQFLLKWSFYSSMIIR 987
Query: 456 DLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVI 499
DLTLRSA+SFGSFHLIRLL+DEYMFYL+EH++A A +T IAVI
Sbjct: 988 DLTLRSASSFGSFHLIRLLFDEYMFYLVEHKIAEAQDKTAIAVI 1031
Score = 476 (172.6 bits), Expect = 3.5e-44, P = 3.5e-44
Identities = 107/226 (47%), Positives = 138/226 (61%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRG 60
GNSKYHYYGIR+KP S LN+ + D+ + Y G P SD G P G
Sbjct: 615 GNSKYHYYGIRIKPGSLLNSQAMDDKQMLAAGY---G------------PSSDGTGGP-G 658
Query: 61 KKYKLVKTDSNSNQY-GSEGHTTA-GQTNSN--------PSPQSGNHNFLGDGSNAIPDF 110
+ T S + Q GS G GQ +SN P ++GDG++A+P F
Sbjct: 659 SGPMVSVTSSTAGQLTGSNGLGGGHGQRHSNGTKKHTFKPETYEACIQYIGDGTSALPSF 718
Query: 111 PEIDLSEDCLPEDCTIEDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNN 170
P I+L+ + T+EDVDTFR +YREHCE+FLDA++ L+F+T+E L R+FWR+ DNNN
Sbjct: 719 PPIELNHS-FNSELTLEDVDTFRGLYREHCESFLDAVLNLEFNTVEFLLRDFWRASDNNN 777
Query: 171 GDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPD 216
DECEEEKYLSK+KL+ L C VQ FVR VD+ FYQN V+V+IPD
Sbjct: 778 LDECEEEKYLSKTKLYLLCHCAEVQKFVREVDYQFYQNTVDVIIPD 823
>UNIPROTKB|F1MGS1 [details] [associations]
symbol:Bt.77818 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR007668 Pfam:PF04589
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GeneTree:ENSGT00550000074532 EMBL:DAAA02019355 EMBL:DAAA02019353
EMBL:DAAA02019354 IPI:IPI01028265 Ensembl:ENSBTAT00000024311
OMA:GACISHP Uniprot:F1MGS1
Length = 979
Score = 999 (356.7 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 200/306 (65%), Positives = 238/306 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 269
+A +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 617 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPV 676
Query: 270 QAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI 329
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +
Sbjct: 677 LQWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRV 736
Query: 330 KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQC 389
KV A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C
Sbjct: 737 KVAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRC 796
Query: 390 DASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFY 449
+ +VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFY
Sbjct: 797 EDRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSTGFPKAAKLFLLKWSFY 856
Query: 450 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVES 509
SSMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +
Sbjct: 857 SSMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLAT 914
Query: 510 SQNPMD 515
S NP+D
Sbjct: 915 SLNPLD 920
Score = 148 (57.2 bits), Expect = 6.4e-06, Sum P(2) = 6.4e-06
Identities = 35/82 (42%), Positives = 47/82 (57%)
Query: 141 EAFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPV 194
EA +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 617 EAIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPV 676
Query: 195 QAFVRRVDFLFYQNLVEVLIPD 216
+ + D + YQ LVE+LIPD
Sbjct: 677 LQWTKHCDNVLYQGLVEILIPD 698
Score = 41 (19.5 bits), Expect = 5.8e-103, Sum P(2) = 5.8e-103
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 42 PDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQS 94
P +P + P SP ++Y +V SEG A +T S SP S
Sbjct: 77 PAAPTPSQPAGAPTPSPASQQYIVVTV--------SEGAMRASETVSEASPGS 121
>UNIPROTKB|E1BP11 [details] [associations]
symbol:Bt.77818 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR007668 Pfam:PF04589
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GeneTree:ENSGT00550000074532 EMBL:DAAA02019355 EMBL:DAAA02019353
EMBL:DAAA02019354 IPI:IPI00924143 Ensembl:ENSBTAT00000061464
Uniprot:E1BP11
Length = 969
Score = 997 (356.0 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 200/305 (65%), Positives = 237/305 (77%)
Query: 217 AFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPVQ 270
A +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 608 AIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPVL 667
Query: 271 AFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIK 330
+ + D + YQ LVE+LIPDVLRPIP +LT +IRNFAK +ESWLT+AM P+EM+ +K
Sbjct: 668 QWTKHCDNVLYQGLVEILIPDVLRPIPSALTQAIRNFAKSLESWLTHAMVNIPEEMLRVK 727
Query: 331 VTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCD 390
V A GAFAQ LRRYTSLNHLAQAARAVLQN+ QINQML+DLNRVDF NVQEQASWVC+C+
Sbjct: 728 VAAAGAFAQTLRRYTSLNHLAQAARAVLQNTAQINQMLSDLNRVDFANVQEQASWVCRCE 787
Query: 391 ASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYS 450
+VQ+LE DFK+TLQQQNSLE+WA WL VV+ VLKP++G F KAA+ FLLKWSFYS
Sbjct: 788 DRVVQRLEQDFKVTLQQQNSLEQWAAWLDGVVSQVLKPYQGSTGFPKAAKLFLLKWSFYS 847
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVESS 510
SMVIRDLTLRSAASFGSFHLIRLLYDEYM+YLIEH+VA A GETPIAV+G E + +S
Sbjct: 848 SMVIRDLTLRSAASFGSFHLIRLLYDEYMYYLIEHRVAQAKGETPIAVMG--EFANLATS 905
Query: 511 QNPMD 515
NP+D
Sbjct: 906 LNPLD 910
Score = 143 (55.4 bits), Expect = 2.1e-05, Sum P(2) = 2.1e-05
Identities = 34/81 (41%), Positives = 46/81 (56%)
Query: 142 AFLDAIVTLDFSTIESLWREFWR---SQDNNNGDEC---EEEKYLSKSKLFCLSKCVPVQ 195
A +D +V L F+ +E+LW+ FWR SQ + E EK L K+ L LSK PV
Sbjct: 608 AIVDVMVNLQFTLVETLWKTFWRYNLSQPSEAPPLAVHDEAEKRLPKASLVLLSKFEPVL 667
Query: 196 AFVRRVDFLFYQNLVEVLIPD 216
+ + D + YQ LVE+LIPD
Sbjct: 668 QWTKHCDNVLYQGLVEILIPD 688
Score = 41 (19.5 bits), Expect = 9.5e-103, Sum P(2) = 9.5e-103
Identities = 16/53 (30%), Positives = 22/53 (41%)
Query: 42 PDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHTTAGQTNSNPSPQS 94
P +P + P SP ++Y +V SEG A +T S SP S
Sbjct: 77 PAAPTPSQPAGAPTPSPASQQYIVVTV--------SEGAMRASETVSEASPGS 121
>UNIPROTKB|P48378 [details] [associations]
symbol:RFX2 "DNA-binding protein RFX2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003150
InterPro:IPR007668 Pfam:PF02257 Pfam:PF04589 PROSITE:PS51526
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0006351 eggNOG:NOG264634
HOGENOM:HOG000294091 KO:K09173 HOVERGEN:HBG002753 CTD:5990
OMA:SGAYLIH EMBL:X76091 EMBL:AK024288 EMBL:AK291196 EMBL:AC011444
EMBL:BC028579 EMBL:BC071571 IPI:IPI00107801 IPI:IPI00298182
PIR:B55926 RefSeq:NP_000626.2 RefSeq:NP_602309.1 UniGene:Hs.465709
ProteinModelPortal:P48378 SMR:P48378 IntAct:P48378
MINT:MINT-3016688 STRING:P48378 PhosphoSite:P48378 DMDM:254763325
PaxDb:P48378 PRIDE:P48378 DNASU:5990 Ensembl:ENST00000303657
Ensembl:ENST00000359161 GeneID:5990 KEGG:hsa:5990 UCSC:uc002meb.3
UCSC:uc002mec.3 GeneCards:GC19M005944 H-InvDB:HIX0014689
HGNC:HGNC:9983 HPA:HPA048969 MIM:142765 neXtProt:NX_P48378
PharmGKB:PA34353 InParanoid:P48378 PhylomeDB:P48378 GenomeRNAi:5990
NextBio:23329 ArrayExpress:P48378 Bgee:P48378 CleanEx:HS_RFX2
Genevestigator:P48378 GermOnline:ENSG00000087903 Uniprot:P48378
Length = 723
Score = 994 (355.0 bits), Expect = 3.4e-100, P = 3.4e-100
Identities = 199/302 (65%), Positives = 235/302 (77%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQ-DNNNG-------DECEEEKYLSKSKLFCLSKCV 267
+A +D ++ L F IE LW FW S+ +++G DE E L K KL L +C
Sbjct: 378 EATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCD 437
Query: 268 PVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMI 327
P+ ++R D + YQ LVE+LIPDVLRP+P +LT +IRNFAK +E WLTNAM PQ++I
Sbjct: 438 PILRWMRSCDHILYQALVEILIPDVLRPVPSTLTQAIRNFAKSLEGWLTNAMSDFPQQVI 497
Query: 328 NIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVC 387
KV V AFAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVC
Sbjct: 498 QTKVGVVSAFAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVC 557
Query: 388 QCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWS 447
QC+ S+VQ+LE DFKLTLQQQ+SL++WA+WL +VV VLK G P+F KAARQFLLKWS
Sbjct: 558 QCEESVVQRLEQDFKLTLQQQSSLDQWASWLDSVVTQVLKQHAGSPSFPKAARQFLLKWS 617
Query: 448 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPV 507
FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL+EH+VA ATGETPIAV+G E N +
Sbjct: 618 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLVEHRVAEATGETPIAVMG--EFNDL 675
Query: 508 ES 509
S
Sbjct: 676 AS 677
Score = 338 (124.0 bits), Expect = 7.6e-28, P = 7.6e-28
Identities = 84/213 (39%), Positives = 112/213 (52%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YKLV-KTDSNSNQYGSEG-H 80
GNSKYHYYGIR+KPDSPLN + + P +K Y+ KTDS + G H
Sbjct: 261 GNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLH 320
Query: 81 TTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHC 140
+T QT + QS +H D S+ P+FP DL L + T+ DV + +YR HC
Sbjct: 321 STPEQTMA---VQSQHHQQYIDVSHVFPEFPAPDLGSFLLQDGVTLHDVKALQLVYRRHC 377
Query: 141 EAFLDAIVTLDFSTIESLWREFWRSQ-DNNNG-------DECEEEKYLSKSKLFCLSKCV 192
EA +D ++ L F IE LW FW S+ +++G DE E L K KL L +C
Sbjct: 378 EATVDVVMNLQFHYIEKLWLSFWNSKASSSDGPTSLPASDEDPEGAVLPKDKLISLCQCD 437
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL 225
P+ ++R D + YQ LVE+LIPD TL
Sbjct: 438 PILRWMRSCDHILYQALVEILIPDVLRPVPSTL 470
>UNIPROTKB|F6USP3 [details] [associations]
symbol:RFX3 "Transcription factor RFX3" species:9606 "Homo
sapiens" [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0060285
"ciliary cell motility" evidence=IEA] [GO:0060287 "epithelial
cilium movement involved in determination of left/right asymmetry"
evidence=IEA] [GO:0072560 "type B pancreatic cell maturation"
evidence=IEA] [GO:2000078 "positive regulation of type B pancreatic
cell development" evidence=IEA] GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0050796 GO:GO:0042384 GO:GO:2000078
GO:GO:0060285 GO:GO:0060287 GO:GO:0072560 EMBL:AL365202
EMBL:AL133549 EMBL:AL354941 HGNC:HGNC:9984 EMBL:AL603631
IPI:IPI00644630 ProteinModelPortal:F6USP3 PRIDE:F6USP3
Ensembl:ENST00000458034 ArrayExpress:F6USP3 Bgee:F6USP3
Uniprot:F6USP3
Length = 174
Score = 662 (238.1 bits), Expect = 5.2e-65, P = 5.2e-65
Identities = 125/170 (73%), Positives = 145/170 (85%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D YQ LVE+LIPDVLRPIP +LT +IRNFAK +E WL+NAM PQ MI KV AV A
Sbjct: 5 DHGMYQALVEILIPDVLRPIPSALTQAIRNFAKSLEGWLSNAMNNIPQRMIQTKVAAVSA 64
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQQ 396
FAQ LRRYTSLNHLAQAARAVLQN++QINQML+DLNRVDF NVQEQASWVCQCD ++VQ+
Sbjct: 65 FAQTLRRYTSLNHLAQAARAVLQNTSQINQMLSDLNRVDFANVQEQASWVCQCDDNMVQR 124
Query: 397 LESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
LE+DFK+TLQQQ++LE+WA WL NV+ LKP+EG+P+F KAARQFLLKW
Sbjct: 125 LETDFKMTLQQQSTLEQWAAWLDNVMMQALKPYEGRPSFPKAARQFLLKW 174
>WB|WBGene00000914 [details] [associations]
symbol:daf-19 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0043053 "dauer
entry" evidence=IMP] [GO:0006357 "regulation of transcription from
RNA polymerase II promoter" evidence=IMP] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 GO:GO:0005634 GO:GO:0043053
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006357
GO:GO:0006351 EMBL:AF226156 EMBL:AF233652 EMBL:Z48783 PIR:T21708
RefSeq:NP_001022139.1 RefSeq:NP_001022140.1 UniGene:Cel.19518
ProteinModelPortal:Q09555 SMR:Q09555 STRING:Q09555 PaxDb:Q09555
PRIDE:Q09555 EnsemblMetazoa:F33H1.1b GeneID:174577
KEGG:cel:CELE_F33H1.1 UCSC:F33H1.1b CTD:174577 WormBase:F33H1.1a
WormBase:F33H1.1b eggNOG:NOG264634 GeneTree:ENSGT00550000074532
HOGENOM:HOG000294091 InParanoid:Q09555 KO:K09173 OMA:VLMKPEQ
NextBio:884630 ArrayExpress:Q09555 Uniprot:Q09555
Length = 805
Score = 556 (200.8 bits), Expect = 5.4e-60, Sum P(2) = 5.4e-60
Identities = 122/313 (38%), Positives = 183/313 (58%)
Query: 208 NLVEVLIPDAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCV 267
++ E+L + L I +DF+++E W +FW N G + + + L
Sbjct: 487 DIYEILCRE-ILALIKNIDFASVEDTWSKFW---SGNFG--------VDRDHISALCTLD 534
Query: 268 PVQAFVRRVDFLFYQNLVEVLIPDVL-RPIPGSLTSSIRNFAKGVESWLTNAMQ--GCPQ 324
VQ ++ VD YQ +V+ LIP+VL + +T + R FAK ++ +L ++ +
Sbjct: 535 QVQDYIIEVDLALYQTIVDTLIPNVLLSELSTGMTQTCRTFAKNIDVYLRKSLMLANLGE 594
Query: 325 EMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQAS 384
+ K+ A+ Q L+RYTSLNHLA A+R VL Q+ QM D RVD + V +QA
Sbjct: 595 FFVKKKIQAIKYLQQGLKRYTSLNHLAHASRGVLMKPEQVQQMYQDYIRVDINTVHQQAG 654
Query: 385 WVCQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKP-N-FTKAARQF 442
W+C CD+ +V + + FK LQ+ +++E WA WL+++V+ VL + KP N +QF
Sbjct: 655 WICGCDSVMVHHVNNAFKHNLQRMSAMEVWAEWLESIVDQVLAKYHDKPANVIANVGKQF 714
Query: 443 LLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSK 502
LL WSFY+SM+IRDLTLRSA SFGSF LIRLL D+YM+YLIE ++A A + I VI +
Sbjct: 715 LLNWSFYTSMIIRDLTLRSAMSFGSFTLIRLLADDYMYYLIESKIAKAGKQQLITVIRAD 774
Query: 503 ESNPVESSQNPMD 515
+ P+ + NP +
Sbjct: 775 KDWPLTT--NPQE 785
Score = 109 (43.4 bits), Expect = 6.1e-06, Sum P(2) = 6.1e-06
Identities = 27/98 (27%), Positives = 45/98 (45%)
Query: 127 EDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLF 186
E++++ IY C L I +DF+++E W +FW N G + + +
Sbjct: 480 EELNSLIDIYEILCREILALIKNIDFASVEDTWSKFW---SGNFG--------VDRDHIS 528
Query: 187 CLSKCVPVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVT 224
L VQ ++ VD YQ +V+ LIP+ L + T
Sbjct: 529 ALCTLDQVQDYIIEVDLALYQTIVDTLIPNVLLSELST 566
Score = 80 (33.2 bits), Expect = 5.4e-60, Sum P(2) = 5.4e-60
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+K S L+++
Sbjct: 321 GNSKYHYYGIRLKDSSTLHSM 341
Score = 80 (33.2 bits), Expect = 5.4e-60, Sum P(2) = 5.4e-60
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 29 GNSKYHYYGIRVKPDSPLNNI 49
GNSKYHYYGIR+K S L+++
Sbjct: 321 GNSKYHYYGIRLKDSSTLHSM 341
Score = 43 (20.2 bits), Expect = 4.2e-56, Sum P(2) = 4.2e-56
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 155 IESLWREFWRSQDNNNGDECEE--EKYLSKSKL 185
I++LWR+ ++ +N E E EK + + L
Sbjct: 35 IDALWRKKFKDVENQKSPEKSEKSEKTIKEEPL 67
>UNIPROTKB|F1NZN9 [details] [associations]
symbol:RFX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0021516
"dorsal spinal cord development" evidence=IEA] [GO:0021696
"cerebellar cortex morphogenesis" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GeneTree:ENSGT00550000074532 OMA:GAMQSYT EMBL:AADN02006291
IPI:IPI00578798 Ensembl:ENSGALT00000020640 Uniprot:F1NZN9
Length = 742
Score = 414 (150.8 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 88/214 (41%), Positives = 133/214 (62%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 263 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 322
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD +++ +Q + +
Sbjct: 323 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREEHRK 382
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLKPFEGKP-NFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL ++V+ V+K +P + K A+QFLL WS +
Sbjct: 383 LIIQLYQEFDHLLEEQSPIESYIEWLDSMVDRCVVKVAAKRPGSLKKVAQQFLLMWSCFG 442
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 443 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 476
Score = 109 (43.4 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 21/59 (35%), Positives = 33/59 (55%)
Query: 107 IPDFPEI-DLSEDCLPEDCTIEDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+P+FP + DL+ LP E V TF +YR HC+ LD ++ +F ++S FW+
Sbjct: 185 LPEFPNVKDLN---LPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 240
Score = 69 (29.3 bits), Expect = 2.4e-52, Sum P(3) = 2.4e-52
Identities = 16/37 (43%), Positives = 21/37 (56%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGS---PRGKK 62
G SKYHYYGI VK +S ++ S + + GKK
Sbjct: 130 GQSKYHYYGIAVKENSQYYDVMYSKKGAAWVNETGKK 166
Score = 67 (28.6 bits), Expect = 3.8e-52, Sum P(3) = 3.8e-52
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK +S ++ S
Sbjct: 130 GQSKYHYYGIAVKENSQYYDVMYS 153
>UNIPROTKB|Q33E94 [details] [associations]
symbol:RFX4 "Transcription factor RFX4" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0021696 "cerebellar cortex morphogenesis"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030901 "midbrain development" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 GO:GO:0005634
GO:GO:0003677 GO:GO:0045944 GO:GO:0030900 EMBL:CH471054
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0003682
GO:GO:0030901 GO:GO:0021696 GO:GO:0021516 EMBL:AY102009
EMBL:AB095365 EMBL:AB095366 EMBL:AB195784 EMBL:AB195785
EMBL:AF332192 EMBL:AK074913 EMBL:AK291445 EMBL:AK315698
EMBL:AC009721 EMBL:AC079385 EMBL:BC028582 EMBL:BC030644
EMBL:AB044245 EMBL:AL833921 IPI:IPI00165990 IPI:IPI00419901
IPI:IPI00719141 IPI:IPI00878891 RefSeq:NP_001193620.1
RefSeq:NP_115880.2 RefSeq:NP_998759.1 UniGene:Hs.388827
ProteinModelPortal:Q33E94 SMR:Q33E94 STRING:Q33E94
PhosphoSite:Q33E94 DMDM:121946871 PRIDE:Q33E94 DNASU:5992
Ensembl:ENST00000229387 Ensembl:ENST00000357881
Ensembl:ENST00000392842 GeneID:5992 KEGG:hsa:5992 UCSC:uc001tlr.3
UCSC:uc001tls.3 UCSC:uc001tlt.3 CTD:5992 GeneCards:GC12P106976
H-InvDB:HIX0037058 HGNC:HGNC:9985 MIM:603958 neXtProt:NX_Q33E94
PharmGKB:PA34355 eggNOG:NOG243313 HOVERGEN:HBG101271 KO:K09174
OMA:GAMQSYT OrthoDB:EOG4J3WGF PhylomeDB:Q33E94 GenomeRNAi:5992
NextBio:23341 ArrayExpress:Q33E94 Bgee:Q33E94 Genevestigator:Q33E94
Uniprot:Q33E94
Length = 735
Score = 408 (148.7 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 256 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 315
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD +++ +Q + +
Sbjct: 316 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRK 375
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL +V+ V+K + + + K A+QFLL WS +
Sbjct: 376 LITQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFG 435
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 436 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 469
Score = 111 (44.1 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 145 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 201
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+YR HC+ LD ++ +F ++S FW+
Sbjct: 202 IMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 233
Score = 71 (30.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GKK
Sbjct: 123 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKK 159
Score = 66 (28.3 bits), Expect = 1.3e-51, Sum P(3) = 1.3e-51
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 123 GQSKYHYYGIAVKESSQYYDVMYS 146
Score = 51 (23.0 bits), Expect = 8.8e-06, Sum P(3) = 8.8e-06
Identities = 36/167 (21%), Positives = 70/167 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 213 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 271
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 272 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 324
Query: 410 SLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRD 456
SL + V+++ F+ ++ + K + Y+ RD
Sbjct: 325 SLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRD 371
>MGI|MGI:1918387 [details] [associations]
symbol:Rfx4 "regulatory factor X, 4 (influences HLA class II
expression)" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0021516 "dorsal spinal cord development" evidence=IMP]
[GO:0021696 "cerebellar cortex morphogenesis" evidence=IMP]
[GO:0030900 "forebrain development" evidence=IMP] [GO:0030901
"midbrain development" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
MGI:MGI:1918387 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0030900 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0003682 GO:GO:0030901 GeneTree:ENSGT00550000074532
GO:GO:0021696 GO:GO:0021516 CTD:5992 eggNOG:NOG243313
HOVERGEN:HBG101271 KO:K09174 OMA:GAMQSYT OrthoDB:EOG4J3WGF
EMBL:AY342003 EMBL:AY102010 EMBL:AB086957 EMBL:AB089184
EMBL:AK016791 EMBL:AK034131 EMBL:AK132673 EMBL:BC138719
EMBL:BC138720 IPI:IPI00380326 IPI:IPI00399974 IPI:IPI00608125
IPI:IPI00882202 RefSeq:NP_001020089.1 RefSeq:NP_081965.2
UniGene:Mm.79070 HSSP:P22670 ProteinModelPortal:Q7TNK1 SMR:Q7TNK1
STRING:Q7TNK1 PRIDE:Q7TNK1 Ensembl:ENSMUST00000060397
Ensembl:ENSMUST00000095388 Ensembl:ENSMUST00000166696 GeneID:71137
KEGG:mmu:71137 UCSC:uc007gkv.1 UCSC:uc007gkw.1 HOGENOM:HOG000013104
InParanoid:Q7TNK1 NextBio:333097 Bgee:Q7TNK1 Genevestigator:Q7TNK1
Uniprot:Q7TNK1
Length = 735
Score = 404 (147.3 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 87/214 (40%), Positives = 131/214 (61%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 256 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 315
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD ++ +Q + +
Sbjct: 316 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSRDEHRR 375
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL +V+ V+K + + + K A+QFLL WS +
Sbjct: 376 LIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFG 435
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 436 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 469
Score = 113 (44.8 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 107 IPDFPEI-DLSEDCLPEDCTIEDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+PDFP + DL+ LP E V TF +YR HC+ LD ++ +F ++S FW+
Sbjct: 178 LPDFPNVKDLN---LPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 233
Score = 68 (29.0 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GK+
Sbjct: 123 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKR 159
Score = 66 (28.3 bits), Expect = 2.3e-51, Sum P(3) = 2.3e-51
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 123 GQSKYHYYGIAVKESSQYYDVMYS 146
Score = 52 (23.4 bits), Expect = 2.7e-06, Sum P(3) = 2.7e-06
Identities = 45/197 (22%), Positives = 82/197 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 213 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 271
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 272 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 324
Query: 410 SLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFH 469
SL + V+++ F+ ++ + K + Y+ RD R
Sbjct: 325 SLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSRDEHRR--------- 375
Query: 470 LIRLLYDEYMFYLIEHQ 486
LI LY E+ +L+E Q
Sbjct: 376 LIIQLYQEFD-HLLEEQ 391
>ZFIN|ZDB-GENE-040909-2 [details] [associations]
symbol:rfx4 "regulatory factor X, 4" species:7955
"Danio rerio" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 ZFIN:ZDB-GENE-040909-2 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
HOVERGEN:HBG101271 EMBL:BC162501 IPI:IPI00512878 UniGene:Dr.78441
Uniprot:B3DGS4
Length = 735
Score = 404 (147.3 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 87/214 (40%), Positives = 129/214 (60%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 256 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 315
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+L+R TSLNHL QA+R V+ ++ QML D VD +++ +Q + +
Sbjct: 316 FSQILKRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSREDQRR 375
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGK-PNFTK-AARQFLLKWSFYS 450
L+ QL +F L+ Q+ +E + WL ++V + GK P K A+QFLL WS +
Sbjct: 376 LIIQLYQEFDRLLEDQSPIEAYIEWLDSMVERCVVRVAGKRPGSLKRVAQQFLLMWSCFG 435
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 436 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 469
Score = 113 (44.8 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 107 IPDFPEI-DLSEDCLPEDCTIEDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+PDFP + DL+ LP E V TF +YR HC+ LD ++ +F ++S FW+
Sbjct: 178 LPDFPNVKDLN---LPTSLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 233
Score = 68 (29.0 bits), Expect = 1.4e-51, Sum P(3) = 1.4e-51
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGS---PRGKK 62
G SKYHYYGI VK S ++ S + + GKK
Sbjct: 123 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVNETGKK 159
Score = 66 (28.3 bits), Expect = 2.3e-51, Sum P(3) = 2.3e-51
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 123 GQSKYHYYGIAVKESSQYYDVMYS 146
>RGD|1562092 [details] [associations]
symbol:Rfx4 "regulatory factor X, 4 (influences HLA class II
expression)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0021516 "dorsal spinal cord
development" evidence=ISO] [GO:0021696 "cerebellar cortex
morphogenesis" evidence=ISO] [GO:0030900 "forebrain development"
evidence=ISO] [GO:0030901 "midbrain development" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 RGD:1562092 GO:GO:0005634
GO:GO:0003677 GO:GO:0045944 GO:GO:0030900 Gene3D:1.10.10.10
InterPro:IPR011991 GO:GO:0003682 GO:GO:0030901
GeneTree:ENSGT00550000074532 GO:GO:0021696 GO:GO:0021516
OrthoDB:EOG4J3WGF IPI:IPI00957432 Ensembl:ENSRNOT00000059685
UCSC:RGD:1562092 Uniprot:D3ZXR0
Length = 745
Score = 404 (147.3 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 87/214 (40%), Positives = 131/214 (61%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 266 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 325
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD ++ +Q + +
Sbjct: 326 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSRDEHRR 385
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL +V+ V+K + + + K A+QFLL WS +
Sbjct: 386 LIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFG 445
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 446 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 479
Score = 113 (44.8 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 107 IPDFPEI-DLSEDCLPEDCTIEDVDTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+PDFP + DL+ LP E V TF +YR HC+ LD ++ +F ++S FW+
Sbjct: 188 LPDFPNVKDLN---LPASLPEEKVSTFIMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 243
Score = 68 (29.0 bits), Expect = 1.7e-51, Sum P(3) = 1.7e-51
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GK+
Sbjct: 133 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKR 169
Score = 66 (28.3 bits), Expect = 2.7e-51, Sum P(3) = 2.7e-51
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 133 GQSKYHYYGIAVKESSQYYDVMYS 156
Score = 52 (23.4 bits), Expect = 2.8e-06, Sum P(3) = 2.8e-06
Identities = 45/197 (22%), Positives = 82/197 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 223 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 281
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 282 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 334
Query: 410 SLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFH 469
SL + V+++ F+ ++ + K + Y+ RD R
Sbjct: 335 SLNHLCQASRTVIHSADITFQMLEDWRNVDLSSITKQTLYTMEDSRDEHRR--------- 385
Query: 470 LIRLLYDEYMFYLIEHQ 486
LI LY E+ +L+E Q
Sbjct: 386 LIIQLYQEFD-HLLEEQ 401
>UNIPROTKB|E2RMU4 [details] [associations]
symbol:RFX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:AAEX03007375
Ensembl:ENSCAFT00000002852 NextBio:20850525 Uniprot:E2RMU4
Length = 736
Score = 406 (148.0 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 257 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 316
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD +++ +Q + +
Sbjct: 317 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRK 376
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL +V+ V+K + + + K A+QFLL WS +
Sbjct: 377 LIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFG 436
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 437 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 470
Score = 111 (44.1 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 146 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 202
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+YR HC+ LD ++ +F ++S FW+
Sbjct: 203 IMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 234
Score = 71 (30.1 bits), Expect = 3.7e-42, Sum P(2) = 3.7e-42
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GKK
Sbjct: 124 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKK 160
Score = 66 (28.3 bits), Expect = 2.2e-51, Sum P(3) = 2.2e-51
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 124 GQSKYHYYGIAVKESSQYYDVMYS 147
Score = 51 (23.0 bits), Expect = 8.9e-06, Sum P(3) = 8.9e-06
Identities = 36/167 (21%), Positives = 70/167 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 214 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 272
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 273 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 325
Query: 410 SLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRD 456
SL + V+++ F+ ++ + K + Y+ RD
Sbjct: 326 SLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRD 372
>UNIPROTKB|E2RMU3 [details] [associations]
symbol:RFX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0030901
"midbrain development" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0021696 "cerebellar cortex
morphogenesis" evidence=IEA] [GO:0021516 "dorsal spinal cord
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 GO:GO:0005634 GO:GO:0003677 GO:GO:0045944
GO:GO:0030900 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682
GO:GO:0030901 GeneTree:ENSGT00550000074532 GO:GO:0021696
GO:GO:0021516 CTD:5992 KO:K09174 OMA:GAMQSYT EMBL:AAEX03007375
RefSeq:XP_003431559.1 Ensembl:ENSCAFT00000002855 GeneID:474529
KEGG:cfa:474529 Uniprot:E2RMU3
Length = 744
Score = 406 (148.0 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 265 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 324
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD +++ +Q + +
Sbjct: 325 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRDEHRK 384
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL +V+ V+K + + + K A+QFLL WS +
Sbjct: 385 LIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFG 444
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 445 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 478
Score = 111 (44.1 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 154 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 210
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+YR HC+ LD ++ +F ++S FW+
Sbjct: 211 IMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 242
Score = 71 (30.1 bits), Expect = 4.0e-42, Sum P(2) = 4.0e-42
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GKK
Sbjct: 132 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKK 168
Score = 66 (28.3 bits), Expect = 2.5e-51, Sum P(3) = 2.5e-51
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 132 GQSKYHYYGIAVKESSQYYDVMYS 155
Score = 51 (23.0 bits), Expect = 9.2e-06, Sum P(3) = 9.2e-06
Identities = 36/167 (21%), Positives = 70/167 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 222 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 280
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 281 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 333
Query: 410 SLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRD 456
SL + V+++ F+ ++ + K + Y+ RD
Sbjct: 334 SLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDSRD 380
>UNIPROTKB|F1MFD3 [details] [associations]
symbol:RFX4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0021696 "cerebellar cortex morphogenesis"
evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] GO:GO:0005634 GO:GO:0045944
GO:GO:0030900 GO:GO:0003682 GO:GO:0030901
GeneTree:ENSGT00550000074532 GO:GO:0021696 GO:GO:0021516 CTD:5992
KO:K09174 OMA:GAMQSYT EMBL:DAAA02013748 EMBL:DAAA02013747
IPI:IPI00732897 RefSeq:NP_001178111.1 UniGene:Bt.106294
UniGene:Bt.44208 Ensembl:ENSBTAT00000000169 GeneID:533900
KEGG:bta:533900 NextBio:20876187 Uniprot:F1MFD3
Length = 641
Score = 405 (147.6 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 87/214 (40%), Positives = 132/214 (61%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 162 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 221
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS---- 392
F+Q+LRR TSLNHL QA+R V+ ++ QML D VD +++ +Q + +
Sbjct: 222 FSQILRRQTSLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDTRDEHRK 281
Query: 393 LVQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQFLLKWSFYS 450
L+ QL +F L++Q+ +E + WL +V+ V+K + + + K A+QFLL WS +
Sbjct: 282 LIIQLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQFLLMWSCFG 341
Query: 451 SMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 342 TRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 375
Score = 111 (44.1 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 51 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 107
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+YR HC+ LD ++ +F ++S FW+
Sbjct: 108 IMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 139
Score = 56 (24.8 bits), Expect = 4.4e-41, Sum P(2) = 4.4e-41
Identities = 14/33 (42%), Positives = 17/33 (51%)
Query: 33 YHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
YHYYGI VK S ++ S + S GKK
Sbjct: 33 YHYYGIAVKESSQYYDVMYSKKGAAWVSETGKK 65
Score = 52 (23.4 bits), Expect = 0.00013, Sum P(3) = 0.00013
Identities = 36/167 (21%), Positives = 70/167 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 119 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 177
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 178 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 230
Query: 410 SLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRD 456
SL + V+++ F+ ++ + K + Y+ RD
Sbjct: 231 SLNHLCQASRTVIHSADITFQMLEDWRNVDLNSITKQTLYTMEDTRD 277
Score = 51 (23.0 bits), Expect = 1.3e-50, Sum P(3) = 1.3e-50
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 5 YHYYGIRVKPDSPLNNIPLS 24
YHYYGI VK S ++ S
Sbjct: 33 YHYYGIAVKESSQYYDVMYS 52
>UNIPROTKB|F1SPQ1 [details] [associations]
symbol:RFX4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0030901 "midbrain
development" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0021696 "cerebellar cortex morphogenesis"
evidence=IEA] [GO:0021516 "dorsal spinal cord development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0005634 GO:GO:0003677 GO:GO:0045944 GO:GO:0030900
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0003682 GO:GO:0030901
GeneTree:ENSGT00550000074532 GO:GO:0021696 GO:GO:0021516
OMA:GAMQSYT EMBL:CU407137 Ensembl:ENSSSCT00000000177 Uniprot:F1SPQ1
Length = 680
Score = 342 (125.4 bits), Expect = 6.9e-39, Sum P(3) = 6.9e-39
Identities = 82/223 (36%), Positives = 124/223 (55%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 192 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIKFELSRR 251
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTD---LNRVDFHNVQEQASWVCQCDASL 393
F+Q+LRR TSLNHL QA+R + I T + + E+ + + D
Sbjct: 252 FSQILRRQTSLNHLCQASRRARLHDIDIVIFSTGPRWTKQPRLRELPEKTRFAGEMDLKC 311
Query: 394 ----------VQQLESDFKLTLQQQNSLEEWANWLKNVVN-AVLK-PFEGKPNFTKAARQ 441
V +L +F L++Q+ +E + WL +V+ V+K + + + K A+Q
Sbjct: 312 AHGMEDEPEKVSRLYQEFDHLLEEQSPIESYIEWLDTMVDRCVVKVAAKRQGSLKKVAQQ 371
Query: 442 FLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
FLL WS + + VIRD+TL SA SFGSFHLI L++D+Y+ YL+E
Sbjct: 372 FLLMWSCFGTRVIRDMTLHSAPSFGSFHLIHLMFDDYVLYLLE 414
Score = 111 (44.1 bits), Expect = 6.9e-39, Sum P(3) = 6.9e-39
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 81 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 137
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+YR HC+ LD ++ +F ++S FW+
Sbjct: 138 IMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 169
Score = 71 (30.1 bits), Expect = 1.5e-31, Sum P(2) = 1.5e-31
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GKK
Sbjct: 59 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKK 95
Score = 66 (28.3 bits), Expect = 6.9e-39, Sum P(3) = 6.9e-39
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 59 GQSKYHYYGIAVKESSQYYDVMYS 82
Score = 43 (20.2 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 36/155 (23%), Positives = 65/155 (41%)
Query: 300 LTSSIR-NFAKGVESWLTNAMQGCPQEMINIK-----VTAVGAFAQMLRRYTSLNHLAQA 353
L + IR NF + V+S+L + QG P M+ + V VG +L + S +
Sbjct: 149 LDTVIRANFDE-VQSFLLHFWQGMPPHMLPVLGSSTVVNIVGVCDSILYKAISGVLMPTV 207
Query: 354 ARAVLQNSTQI----NQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLTLQQQN 409
+A+ + TQ+ + L + +V H++ E ++ +L F L++Q
Sbjct: 208 LQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLR-------NIKFELSRRFSQILRRQT 260
Query: 410 SLEEWANWLKNV----VNAVLKPFEGKPNFTKAAR 440
SL + ++ V+ F P +TK R
Sbjct: 261 SLNHLCQASRRARLHDIDIVI--FSTGPRWTKQPR 293
>ZFIN|ZDB-GENE-041014-299 [details] [associations]
symbol:rfx6 "regulatory factor X, 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=IMP]
[GO:0003310 "pancreatic A cell differentiation" evidence=ISS]
[GO:0003309 "type B pancreatic cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISS]
[GO:0090104 "pancreatic epsilon cell differentiation" evidence=ISS]
[GO:0050796 "regulation of insulin secretion" evidence=ISS]
[GO:0003311 "pancreatic D cell differentiation" evidence=ISS]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=ISS] [GO:0042593 "glucose homeostasis" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 ZFIN:ZDB-GENE-041014-299 GO:GO:0005634
GO:GO:0045893 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351
GO:GO:0042593 GO:GO:0050796 GO:GO:0044212
GeneTree:ENSGT00550000074532 GO:GO:0003310 GO:GO:0003309
eggNOG:NOG243313 CTD:222546 HOGENOM:HOG000154105 GO:GO:0003311
GO:GO:0090104 EMBL:BX000362 IPI:IPI00511539 RefSeq:XP_684953.3
STRING:Q5RJA1 Ensembl:ENSDART00000061122 GeneID:556925
KEGG:dre:556925 HOVERGEN:HBG108402 InParanoid:Q5RJA1
OrthoDB:EOG4WDDB7 NextBio:20881734 Bgee:Q5RJA1 Uniprot:Q5RJA1
Length = 848
Score = 364 (133.2 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 93/278 (33%), Positives = 149/278 (53%)
Query: 219 LDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDF 278
LD + ++F I++ FW+ + E + +FC+ C D
Sbjct: 208 LDNAINVNFEEIQNFLLHFWQGMPEHLLPLLENPVIVD---IFCV--C----------DS 252
Query: 279 LFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGAFA 338
+ Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ + KV F
Sbjct: 253 ILYKVLTDVLIPATMQDMPESLLADIRNFAKHWEHWMLSSLENLPEILSEKKVPIARRFV 312
Query: 339 QMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA--SWVCQCDASLVQQ 396
L+R TS HLAQ AR L + + M+ D+++VD +++ QA S D+ +
Sbjct: 313 SSLKRQTSFLHLAQIARPALFDQIVVTSMVNDIDKVDLNSIGSQALLSVTNDQDSDFYSE 372
Query: 397 LES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLLKWSF 448
+S + K L++ ++E + WL +VV V+KP + G+ + K A+ FLLKWSF
Sbjct: 373 YDSISVFQELKDLLRKNATVESFIEWLDSVVEQKVIKPSKQNGR-SVKKRAQDFLLKWSF 431
Query: 449 YSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
+ + V+ +LTL +A SFGSFHLIR+L DEY+ IE Q
Sbjct: 432 FGARVMHNLTLNNATSFGSFHLIRMLLDEYILLAIETQ 469
Score = 115 (45.5 bits), Expect = 6.8e-05, Sum P(2) = 6.8e-05
Identities = 51/225 (22%), Positives = 87/225 (38%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFR 133
Y +G T +G N + ++ +P+FP L + + E VDT
Sbjct: 140 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQ--HLVLQDSVSKEKVDTLI 197
Query: 134 SIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVP 193
+Y+ HC+ LD + ++F I++ FW+ + E + +FC+ C
Sbjct: 198 MMYKTHCQCILDNAINVNFEEIQNFLLHFWQGMPEHLLPLLENPVIVD---IFCV--C-- 250
Query: 194 VQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL--DFSTIESLWREFWRSQDNNNGDECEE 251
D + Y+ L +VLIP D +L D W E W N E
Sbjct: 251 --------DSILYKVLTDVLIPATMQDMPESLLADIRNFAKHW-EHWMLSSLENLPEILS 301
Query: 252 EKYLSKSKLFCLSKCVPVQAFVRRVDF----LFYQNLVEVLIPDV 292
EK + ++ F +S +F+ LF Q +V ++ D+
Sbjct: 302 EKKVPIARRF-VSSLKRQTSFLHLAQIARPALFDQIVVTSMVNDI 345
Score = 65 (27.9 bits), Expect = 3.3e-33, Sum P(2) = 3.3e-33
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 118 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 169
Score = 64 (27.6 bits), Expect = 4.3e-33, Sum P(2) = 4.3e-33
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 118 GHSKYHYYGIGIKESS 133
>UNIPROTKB|Q8HWS3 [details] [associations]
symbol:RFX6 "DNA-binding protein RFX6" species:9606 "Homo
sapiens" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0031018 "endocrine pancreas development" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0003310 "pancreatic A cell differentiation"
evidence=ISS] [GO:0090104 "pancreatic epsilon cell differentiation"
evidence=ISS] [GO:0050796 "regulation of insulin secretion"
evidence=IMP] [GO:0042593 "glucose homeostasis" evidence=IMP]
[GO:0003309 "type B pancreatic cell differentiation" evidence=ISS]
[GO:0003311 "pancreatic D cell differentiation" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 GO:GO:0005634 GO:GO:0045893 EMBL:CH471051
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0042593
GO:GO:0050796 GO:GO:0044212 GO:GO:0003310 GO:GO:0003309
eggNOG:NOG243313 HSSP:P22670 CTD:222546 HOGENOM:HOG000154105
OMA:TQLTLQW GO:GO:0003311 GO:GO:0090104 HOVERGEN:HBG108402
OrthoDB:EOG4WDDB7 EMBL:AL355272 EMBL:BC039248 IPI:IPI00219885
RefSeq:NP_775831.2 UniGene:Hs.352276 ProteinModelPortal:Q8HWS3
SMR:Q8HWS3 IntAct:Q8HWS3 STRING:Q8HWS3 PhosphoSite:Q8HWS3
DMDM:166225159 PRIDE:Q8HWS3 Ensembl:ENST00000332958 GeneID:222546
KEGG:hsa:222546 UCSC:uc003pxm.3 GeneCards:GC06P117199
H-InvDB:HIX0025215 HGNC:HGNC:21478 HPA:HPA037697 MIM:601346
MIM:612659 neXtProt:NX_Q8HWS3 Orphanet:293864 PharmGKB:PA162401254
PhylomeDB:Q8HWS3 GenomeRNAi:222546 NextBio:91623 Bgee:Q8HWS3
CleanEx:HS_RFX6 Genevestigator:Q8HWS3 Uniprot:Q8HWS3
Length = 928
Score = 361 (132.1 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 82/222 (36%), Positives = 132/222 (59%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ + + K+ V
Sbjct: 319 DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRR 378
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ RVD +++ QA S ++
Sbjct: 379 FVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIERVDLNSIGSQALLTISGSTDTESG 438
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 439 IYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLKKRAQDFLL 497
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E Q
Sbjct: 498 KWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQ 539
Score = 107 (42.7 bits), Expect = 0.00059, Sum P(2) = 0.00059
Identities = 49/228 (21%), Positives = 90/228 (39%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIED-VDTF 132
Y +G T +G N + ++ +P+FP ++ + + C +D VDT
Sbjct: 208 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPS---AQHLVYQGCISKDKVDTL 264
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCV 192
+Y+ HC+ LD + +F I+ FW+ ++ E + +FC+ C
Sbjct: 265 IMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIID---IFCV--C- 318
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL--DFSTIESLWREFWRSQDNNNGDECE 250
D + Y+ L +VLIP + +L D W + W N E
Sbjct: 319 ---------DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQ-WVVSSLENLPEAL 368
Query: 251 EEKYLSKSKLFCLSKCVPVQAFVRRVDF----LFYQNLVEVLIPDVLR 294
+K + + F +S +F+ LF Q++V ++ D+ R
Sbjct: 369 TDKKIPIVRRF-VSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIER 415
Score = 65 (27.9 bits), Expect = 1.2e-32, Sum P(2) = 1.2e-32
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 186 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 237
Score = 64 (27.6 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 186 GHSKYHYYGIGIKESS 201
>UNIPROTKB|E1C4M7 [details] [associations]
symbol:RFX6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003309 "type B pancreatic cell differentiation"
evidence=IEA] [GO:0003310 "pancreatic A cell differentiation"
evidence=IEA] [GO:0003311 "pancreatic D cell differentiation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0042593
"glucose homeostasis" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0090104 "pancreatic epsilon cell differentiation" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 GO:GO:0005634
GO:GO:0045893 Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593
GO:GO:0050796 GO:GO:0044212 GeneTree:ENSGT00550000074532
OMA:TQLTLQW EMBL:AADN02001990 EMBL:AADN02001989 IPI:IPI00593297
Ensembl:ENSGALT00000024061 Uniprot:E1C4M7
Length = 916
Score = 360 (131.8 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 81/222 (36%), Positives = 131/222 (59%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ +++ K+
Sbjct: 306 DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPETLMDKKLPIARR 365
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ +VD +++ QA S D
Sbjct: 366 FVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIEKVDLNSIGSQALLAVSGSTDTDGE 425
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 426 VYNEYDSITVFQELKDLLKKNATVESFIEWLDTVVEQRVIKASKQNGR-SLKKRAQDFLL 484
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E Q
Sbjct: 485 KWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQ 526
Score = 108 (43.1 bits), Expect = 0.00045, Sum P(2) = 0.00045
Identities = 50/226 (22%), Positives = 90/226 (39%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIED-VDTF 132
Y +G T +G N + ++ +P+FP ++ L + C +D VDT
Sbjct: 195 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPS---AQHLLLQGCISKDKVDTL 251
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCV 192
+Y+ HC+ LD + +F I+ FW+ ++ E + +FC+ C
Sbjct: 252 IMMYKTHCQCVLDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPIIVD---IFCV--C- 305
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL--DFSTIESLWREFWRSQDNNNGDECE 250
D + Y+ L +VLIP + +L D W + W N E
Sbjct: 306 ---------DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQ-WVVSSLENLPETL 355
Query: 251 EEKYLSKSKLFCLSKCVPVQAFVRRVDF----LFYQNLVEVLIPDV 292
+K L ++ F +S +F+ LF Q++V ++ D+
Sbjct: 356 MDKKLPIARRF-VSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDI 400
Score = 65 (27.9 bits), Expect = 1.6e-32, Sum P(2) = 1.6e-32
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 173 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 224
Score = 64 (27.6 bits), Expect = 2.0e-32, Sum P(2) = 2.0e-32
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 173 GHSKYHYYGIGIKESS 188
>UNIPROTKB|E1BFK8 [details] [associations]
symbol:LOC524074 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0090104 "pancreatic epsilon cell differentiation"
evidence=IEA] [GO:0050796 "regulation of insulin secretion"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0042593 "glucose homeostasis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003311
"pancreatic D cell differentiation" evidence=IEA] [GO:0003310
"pancreatic A cell differentiation" evidence=IEA] [GO:0003309 "type
B pancreatic cell differentiation" evidence=IEA] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 GO:GO:0005634 GO:GO:0045893
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0042593 GO:GO:0050796
GO:GO:0044212 GeneTree:ENSGT00550000074532 GO:GO:0003310
GO:GO:0003309 OMA:TQLTLQW GO:GO:0003311 GO:GO:0090104
EMBL:DAAA02025783 IPI:IPI00685866 RefSeq:XP_003586511.1
Ensembl:ENSBTAT00000000329 GeneID:524074 KEGG:bta:524074
Uniprot:E1BFK8
Length = 927
Score = 360 (131.8 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 81/222 (36%), Positives = 132/222 (59%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ + + K+ V
Sbjct: 318 DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRR 377
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ +VD +++ QA S ++
Sbjct: 378 FVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIEKVDLNSIGSQALLTISGSTDTESD 437
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 438 IYTEYDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLKKRAQDFLL 496
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E Q
Sbjct: 497 KWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQ 538
Score = 105 (42.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 49/227 (21%), Positives = 88/227 (38%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEID--LSEDCLPEDCTIEDVDT 131
Y +G T +G N + ++ +P+FP + + CL +D VDT
Sbjct: 207 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPSAQHLVYQGCLSKD----KVDT 262
Query: 132 FRSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKC 191
+Y+ HC+ LD + +F I+ FW+ ++ E + +FC+ C
Sbjct: 263 LIMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIID---IFCV--C 317
Query: 192 VPVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL--DFSTIESLWREFWRSQDNNNGDEC 249
D + Y+ L +VLIP + +L D W + W N E
Sbjct: 318 ----------DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQ-WVVSSLENLPEA 366
Query: 250 EEEKYLSKSKLFCLSKCVPVQAFVRRVDF----LFYQNLVEVLIPDV 292
+K + + F +S +F+ LF Q++V ++ D+
Sbjct: 367 LTDKKIPIVRRF-VSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDI 412
Score = 65 (27.9 bits), Expect = 1.7e-32, Sum P(2) = 1.7e-32
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 185 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 236
Score = 64 (27.6 bits), Expect = 2.1e-32, Sum P(2) = 2.1e-32
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 185 GHSKYHYYGIGIKESS 200
>UNIPROTKB|E2RTB6 [details] [associations]
symbol:RFX6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 CTD:222546 OMA:TQLTLQW
EMBL:AAEX03000387 RefSeq:XP_541213.2 Ensembl:ENSCAFT00000001421
GeneID:484096 KEGG:cfa:484096 Uniprot:E2RTB6
Length = 922
Score = 358 (131.1 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 81/222 (36%), Positives = 132/222 (59%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ + + K+ V
Sbjct: 313 DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRR 372
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ +VD +++ QA S ++
Sbjct: 373 FVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIEKVDLNSIGSQALLTISGSTDTESD 432
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 433 IYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLKKRAQDFLL 491
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E Q
Sbjct: 492 KWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQ 533
Score = 65 (27.9 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 180 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 231
Score = 64 (27.6 bits), Expect = 2.2e-32, Sum P(3) = 2.2e-32
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 180 GHSKYHYYGIGIKESS 195
Score = 39 (18.8 bits), Expect = 1.8e-32, Sum P(3) = 1.8e-32
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 487 VALATGETPIAVIGSKESNPVESSQNPMDNGLYAHGQN 524
V ++ +TPI S + SSQ P L +HG N
Sbjct: 863 VVASSLQTPIPS-SSSQCMYGTSSQYPAQETLDSHGAN 899
>RGD|1307491 [details] [associations]
symbol:Rfx6 "regulatory factor X, 6" species:10116 "Rattus
norvegicus" [GO:0003309 "type B pancreatic cell differentiation"
evidence=ISO] [GO:0003310 "pancreatic A cell differentiation"
evidence=ISO] [GO:0003311 "pancreatic D cell differentiation"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0031018
"endocrine pancreas development" evidence=ISO] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0050796
"regulation of insulin secretion" evidence=ISO] [GO:0090104
"pancreatic epsilon cell differentiation" evidence=ISO] RGD:1307491
GeneTree:ENSGT00550000074532 IPI:IPI00782675
Ensembl:ENSRNOT00000030642 UCSC:RGD:1307491 Uniprot:F1LTN7
Length = 745
Score = 321 (118.1 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 76/222 (34%), Positives = 127/222 (57%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ + + +P L SL + IRNFAK E W+ ++++ P+ +I+ K+ +
Sbjct: 136 DSILYKMVTSMHLPAKLSQGGESLLADIRNFAKNWEQWVVSSLENLPEALIDKKIPILRR 195
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ +VD +++ QA S ++
Sbjct: 196 FVSSLKRQTSFLHLAQIARPALFDQHVVNAMVSDIEKVDLNSIGSQALLTISNSTDTESD 255
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 256 IYSEYDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKMSKQNGR-SLKKRAQDFLL 314
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGS HLIR+L DEY+ +E Q
Sbjct: 315 KWSFFGARVMHNLTLNNASSFGSLHLIRMLLDEYILLAMETQ 356
Score = 89 (36.4 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 22/97 (22%), Positives = 42/97 (43%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIED-VDTF 132
Y +G T +G N + ++ +P+FP ++ + C +D VDT
Sbjct: 25 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPS---AQHLVYPGCIAKDKVDTL 81
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNN 169
+Y+ HC+ LD + +F I+ FW+ ++
Sbjct: 82 IMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDH 118
Score = 55 (24.4 bits), Expect = 4.2e-27, Sum P(2) = 4.2e-27
Identities = 16/52 (30%), Positives = 22/52 (42%)
Query: 30 NSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
+ KYHYYGI +K S + S + G R KL + +Y T
Sbjct: 4 DGKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 54
Score = 54 (24.1 bits), Expect = 2.5e-32, Sum P(3) = 2.5e-32
Identities = 9/15 (60%), Positives = 11/15 (73%)
Query: 2 NSKYHYYGIRVKPDS 16
+ KYHYYGI +K S
Sbjct: 4 DGKYHYYGIGIKESS 18
>UNIPROTKB|D2HNW6 [details] [associations]
symbol:RFX6 "DNA-binding protein RFX6" species:9646
"Ailuropoda melanoleuca" [GO:0003309 "type B pancreatic cell
differentiation" evidence=ISS] [GO:0003310 "pancreatic A cell
differentiation" evidence=ISS] [GO:0003311 "pancreatic D cell
differentiation" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0031018 "endocrine pancreas development" evidence=ISS]
[GO:0042593 "glucose homeostasis" evidence=ISS] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0050796 "regulation of insulin secretion"
evidence=ISS] [GO:0090104 "pancreatic epsilon cell differentiation"
evidence=ISS] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0005634 GO:GO:0045893 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GO:GO:0042593 GO:GO:0050796 GO:GO:0044212
GeneTree:ENSGT00550000074532 GO:GO:0003310 GO:GO:0003309
EMBL:GL193101 RefSeq:XP_002924145.1 Ensembl:ENSAMET00000006412
GeneID:100476328 KEGG:aml:100476328 CTD:222546 HOGENOM:HOG000154105
OMA:TQLTLQW GO:GO:0003311 GO:GO:0090104 Uniprot:D2HNW6
Length = 928
Score = 358 (131.1 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 81/222 (36%), Positives = 132/222 (59%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ + + K+ V
Sbjct: 319 DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALTDKKIPIVRR 378
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ +VD +++ QA S ++
Sbjct: 379 FVSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDIEKVDLNSIGSQALLTISGSTDTESD 438
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 439 IYTEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKTSKQNGR-SLKKRAQDFLL 497
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E Q
Sbjct: 498 KWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQ 539
Score = 105 (42.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 48/226 (21%), Positives = 89/226 (39%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIED-VDTF 132
Y +G T +G N + ++ +P+FP ++ + + C +D VDT
Sbjct: 208 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPS---AQHLVYQGCISKDKVDTL 264
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCV 192
+Y+ HC+ LD + +F I+ FW+ ++ E + +FC+ C
Sbjct: 265 IMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIID---IFCV--C- 318
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL--DFSTIESLWREFWRSQDNNNGDECE 250
D + Y+ L +VLIP + +L D W + W N E
Sbjct: 319 ---------DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQ-WVVSSLENLPEAL 368
Query: 251 EEKYLSKSKLFCLSKCVPVQAFVRRVDF----LFYQNLVEVLIPDV 292
+K + + F +S +F+ LF Q++V ++ D+
Sbjct: 369 TDKKIPIVRRF-VSSLKRQTSFLHLAQIARPALFDQHVVNSMVSDI 413
Score = 65 (27.9 bits), Expect = 3.0e-32, Sum P(2) = 3.0e-32
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 186 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 237
Score = 64 (27.6 bits), Expect = 3.8e-32, Sum P(2) = 3.8e-32
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 186 GHSKYHYYGIGIKESS 201
>MGI|MGI:2445208 [details] [associations]
symbol:Rfx6 "regulatory factor X, 6" species:10090 "Mus
musculus" [GO:0003309 "type B pancreatic cell differentiation"
evidence=IMP] [GO:0003310 "pancreatic A cell differentiation"
evidence=IMP] [GO:0003311 "pancreatic D cell differentiation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0031018 "endocrine pancreas development" evidence=ISO]
[GO:0042593 "glucose homeostasis" evidence=ISO;IMP] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0050796 "regulation of insulin secretion"
evidence=ISO;IMP] [GO:0090104 "pancreatic epsilon cell
differentiation" evidence=IMP] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 MGI:MGI:2445208 GO:GO:0005634 GO:GO:0045893
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 GO:GO:0042593
GO:GO:0050796 GO:GO:0044212 GeneTree:ENSGT00550000074532
GO:GO:0003310 GO:GO:0003309 eggNOG:NOG243313 HSSP:P22670 CTD:222546
HOGENOM:HOG000154105 OMA:TQLTLQW GO:GO:0003311 GO:GO:0090104
HOVERGEN:HBG108402 OrthoDB:EOG4WDDB7 EMBL:AK029809 EMBL:AK049380
EMBL:AC153527 EMBL:BC132104 EMBL:BC132294 IPI:IPI00275499
IPI:IPI00857281 IPI:IPI00882131 RefSeq:NP_001152861.1
RefSeq:NP_796280.1 UniGene:Mm.109190 ProteinModelPortal:Q8C7R7
SMR:Q8C7R7 STRING:Q8C7R7 PhosphoSite:Q8C7R7 PRIDE:Q8C7R7
Ensembl:ENSMUST00000050455 Ensembl:ENSMUST00000122922 GeneID:320995
KEGG:mmu:320995 UCSC:uc007fax.2 UCSC:uc007fay.1 UCSC:uc011xdr.1
InParanoid:Q8C7R7 NextBio:397819 Bgee:Q8C7R7 Genevestigator:Q8C7R7
Uniprot:Q8C7R7
Length = 927
Score = 357 (130.7 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 81/222 (36%), Positives = 133/222 (59%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D + Y+ L +VLIP ++ +P SL + IRNFAK E W+ ++++ P+ +I+ K+ +
Sbjct: 318 DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQWVVSSLENLPEALIDKKIPILRR 377
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQA----SWVCQCDAS 392
F L+R TS HLAQ AR L + +N M++D+ +VD +++ QA S ++
Sbjct: 378 FVSSLKRQTSFLHLAQIARPALFDQHVVNAMVSDIEKVDLNSIGSQALLTISNSTDTESD 437
Query: 393 LVQQLES-----DFKLTLQQQNSLEEWANWLKNVVNA-VLKPFE--GKPNFTKAARQFLL 444
+ + +S + K L++ ++E + WL VV V+K + G+ + K A+ FLL
Sbjct: 438 IYSEHDSITVFQELKDLLKKNATVEAFIEWLDTVVEQRVIKMSKQNGR-SLKKRAQDFLL 496
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIEHQ 486
KWSF+ + V+ +LTL +A+SFGSFHLIR+L DEY+ +E Q
Sbjct: 497 KWSFFGARVMHNLTLNNASSFGSFHLIRMLLDEYILLAMETQ 538
Score = 105 (42.0 bits), Expect = 0.00096, Sum P(2) = 0.00096
Identities = 48/226 (21%), Positives = 89/226 (39%)
Query: 75 YGSEGHTT-AGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIED-VDTF 132
Y +G T +G N + ++ +P+FP ++ + + C +D VDT
Sbjct: 207 YSGKGLTRFSGSKLKNEGGFTRKYSLSSKTGTLLPEFPS---AQHLVYQGCISKDKVDTL 263
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCV 192
+Y+ HC+ LD + +F I+ FW+ ++ E + +FC+ C
Sbjct: 264 IMMYKTHCQCILDNAINGNFEEIQHFLLHFWQGMPDHLLPLLENPVIID---IFCV--C- 317
Query: 193 PVQAFVRRVDFLFYQNLVEVLIPDAFLDAIVTL--DFSTIESLWREFWRSQDNNNGDECE 250
D + Y+ L +VLIP + +L D W + W N E
Sbjct: 318 ---------DSILYKVLTDVLIPATMQEMPESLLADIRNFAKNWEQ-WVVSSLENLPEAL 367
Query: 251 EEKYLSKSKLFCLSKCVPVQAFVRRVDF----LFYQNLVEVLIPDV 292
+K + + F +S +F+ LF Q++V ++ D+
Sbjct: 368 IDKKIPILRRF-VSSLKRQTSFLHLAQIARPALFDQHVVNAMVSDI 412
Score = 65 (27.9 bits), Expect = 4.0e-32, Sum P(2) = 4.0e-32
Identities = 18/53 (33%), Positives = 24/53 (45%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
G+SKYHYYGI +K S + S + G R KL + +Y T
Sbjct: 185 GHSKYHYYGIGIKESSAYYHSVYSGK-GLTRFSGSKLKNEGGFTRKYSLSSKT 236
Score = 64 (27.6 bits), Expect = 5.2e-32, Sum P(2) = 5.2e-32
Identities = 11/16 (68%), Positives = 13/16 (81%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+SKYHYYGI +K S
Sbjct: 185 GHSKYHYYGIGIKESS 200
>RGD|1307779 [details] [associations]
symbol:Rfx3 "regulatory factor X, 3 (influences HLA class II
expression)" species:10116 "Rattus norvegicus" [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0042384 "cilium
assembly" evidence=IEA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0050796 "regulation of insulin
secretion" evidence=IEA] [GO:0060285 "ciliary cell motility"
evidence=IEA] [GO:0060287 "epithelial cilium movement involved in
determination of left/right asymmetry" evidence=IEA] [GO:0072560
"type B pancreatic cell maturation" evidence=IEA] [GO:2000078
"positive regulation of type B pancreatic cell development"
evidence=IEA] InterPro:IPR003150 InterPro:IPR007668 Pfam:PF02257
Pfam:PF04589 PROSITE:PS51526 RGD:1307779 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
eggNOG:NOG264634 GeneTree:ENSGT00550000074532 KO:K09173 CTD:5991
UniGene:Rn.23347 EMBL:BC085953 IPI:IPI00372517
RefSeq:NP_001012172.1 SMR:Q5U2M9 STRING:Q5U2M9
Ensembl:ENSRNOT00000023762 GeneID:361746 KEGG:rno:361746
HOGENOM:HOG000139750 HOVERGEN:HBG058855 NextBio:677484
Genevestigator:Q5U2M9 Uniprot:Q5U2M9
Length = 458
Score = 308 (113.5 bits), Expect = 2.6e-25, P = 2.6e-25
Identities = 71/181 (39%), Positives = 95/181 (52%)
Query: 17 PLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YK-LVKTD 69
P+N GNSKYHYYGIRVKPDSPLN + + P +K YK + K D
Sbjct: 219 PVNAASFGKLIRGNSKYHYYGIRVKPDSPLNRLQEDMQYMAMRQQPMQQKQRYKPMQKVD 278
Query: 70 SNSNQYGSEGHTTAGQTNSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDV 129
++ + G T QS +H D S A+P+F E+++S LP+ T ED+
Sbjct: 279 GVADGFTGSGQQTGTSVEQTVIAQSQHHQQFLDASRALPEFGEVEISS--LPDGTTFEDI 336
Query: 130 DTFRSIYREHCEAFLDAIVTLDFSTIESLWREFWRSQDNN--NGDECEEEKYLSKS-KLF 186
+ +S+YREHCEA LD +V L FS IE LW+ FWR + +G E + L S F
Sbjct: 337 KSLQSLYREHCEAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESRCLDPSHSKF 396
Query: 187 C 187
C
Sbjct: 397 C 397
Score = 110 (43.8 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 231 GNSKYHYYGIRVKPDSPLNRL 251
Score = 88 (36.0 bits), Expect = 1.7e-07, Sum P(2) = 1.7e-07
Identities = 20/50 (40%), Positives = 26/50 (52%)
Query: 216 DAFLDAIVTLDFSTIESLWREFWRSQDNN--NGDECEEEKYLSKS-KLFC 262
+A LD +V L FS IE LW+ FWR + +G E + L S FC
Sbjct: 348 EAILDVVVNLQFSLIEKLWQTFWRYSPSTPTDGTTITESRCLDPSHSKFC 397
>MGI|MGI:3588206 [details] [associations]
symbol:Rfx8 "regulatory factor X 8" species:10090 "Mus
musculus" [GO:0003674 "molecular_function" evidence=ND] [GO:0003677
"DNA binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR003150
Pfam:PF02257 PROSITE:PS51526 MGI:MGI:3588206 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GO:GO:0006351 GeneTree:ENSGT00550000074532 CTD:731220
HOGENOM:HOG000155476 OMA:DNFCICE OrthoDB:EOG42V8HP EMBL:AC119809
EMBL:AC122922 IPI:IPI00344121 RefSeq:NP_001139132.1
UniGene:Mm.334107 ProteinModelPortal:D3YU81 SMR:D3YU81
PhosphoSite:D3YU81 PRIDE:D3YU81 Ensembl:ENSMUST00000151913
GeneID:619289 KEGG:mmu:619289 UCSC:uc007atn.2 NextBio:414575
Bgee:D3YU81 Uniprot:D3YU81
Length = 596
Score = 255 (94.8 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 65/217 (29%), Positives = 112/217 (51%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGA 336
D Y+ L ++L+PD L + S+R F+K + WL A++G P + K+ V
Sbjct: 230 DMQLYKGLEDMLLPDFLEDVSIQYLKSVRLFSKRFKLWLLGALEGFPAILQISKLKEVTG 289
Query: 337 FAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQQ 396
F + LRR T L+++A+ + VL+NS +I + +DL + + + V + D+ ++
Sbjct: 290 FVKRLRRKTYLSNMAKTMKMVLKNSRRIGLLKSDLRAIIREGTLDISKKVLEGDSDHEEE 349
Query: 397 LESDFKLT--------LQQQNSLEEWANWLK-NVVNAVLKPFEGKPNFTKAARQFLLKWS 447
ES ++ L+ L E N + N+ V +P + K +F K A F LKW+
Sbjct: 350 PESHTEMKCLGCLISLLETSTDLAELLNCVSSNLQVLVFQPSKNKEDFIKLAASFQLKWN 409
Query: 448 FYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
F + V + +TL SFG++HL LL EY+ +++E
Sbjct: 410 FLLTAVSKAMTLSHRDSFGAWHLFHLLLLEYVIHILE 446
Score = 56 (24.8 bits), Expect = 5.6e-20, Sum P(2) = 5.6e-20
Identities = 33/143 (23%), Positives = 51/143 (35%)
Query: 29 GNSKYHYYGIRVKPDSPL--NNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHTTAGQT 86
G+++YHY GI +K S + L + G K SN E +T
Sbjct: 81 GSARYHYDGIYIKKSSFFYAHYCYLLGKKSCHSGNLIAFGKFPDYSNVLQQE------ET 134
Query: 87 NSNPSPQSGNHNFLGDGSNAIPDFPEIDLSEDCLPEDCTIEDVDTFRSIYREHCEAFLDA 146
N SP + GS P F + E L + + V Y +C L
Sbjct: 135 CENHSPIKKDPM----GSPVSP-FRRCPVWEQELANKYSCKLVVFLADEYCNYCRDILQN 189
Query: 147 IVTLDFSTIESLWREFWRSQDNN 169
+ + +E L FW+S+ +
Sbjct: 190 VRNQELEKVEDLITSFWKSRQQD 212
Score = 48 (22.0 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+++YHY GI +K S
Sbjct: 81 GSARYHYDGIYIKKSS 96
Score = 46 (21.3 bits), Expect = 5.9e-20, Sum P(3) = 5.9e-20
Identities = 18/87 (20%), Positives = 33/87 (37%)
Query: 136 YREHCEAFLDAIVTLDFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVPVQ 195
Y +C L + + +E L FW+S+ + L V+
Sbjct: 179 YCNYCRDILQNVRNQELEKVEDLITSFWKSRQQDT---------------VMLMSLPDVR 223
Query: 196 AFVRRVDFLFYQNLVEVLIPDAFLDAI 222
+ D Y+ L ++L+PD FL+ +
Sbjct: 224 QLLGCYDMQLYKGLEDMLLPD-FLEDV 249
>RGD|1560724 [details] [associations]
symbol:Rfx8 "RFX family member 8, lacking RFX DNA binding
domain" species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 RGD:1560724 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GeneTree:ENSGT00550000074532
OrthoDB:EOG42V8HP IPI:IPI00557907 Ensembl:ENSRNOT00000047654
UCSC:RGD:1560724 Uniprot:D3ZCQ8
Length = 596
Score = 246 (91.7 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 62/213 (29%), Positives = 110/213 (51%)
Query: 281 YQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGAFAQM 340
++ L + L+PD L + S+R F+K + WL A++G P + K+ V F +
Sbjct: 233 FKGLEDTLLPDFLEDVSIQYLKSVRLFSKRFKLWLLGALEGFPAILQISKLKEVTGFVKR 292
Query: 341 LRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESD 400
LRR T L+++A+ + VL+NS ++ + +DL + + + V + D+ ++ ES
Sbjct: 293 LRRKTYLSNMAKTMKMVLKNSRRVGLLKSDLRAIIREGTLDISKKVLEGDSGHEEEPESH 352
Query: 401 FKLT--------LQQQNSLEEWANWLKNVVNA-VLKPFEGKPNFTKAARQFLLKWSFYSS 451
++ L+ L E N + + + A V +P + K F K A F LKW+F +
Sbjct: 353 TEMKCLGCLISLLETSTDLAELLNCVSSNLQALVFQPSKSKEEFIKLAASFQLKWNFLLT 412
Query: 452 MVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
V + +TL SFG++HL LL EY+ +++E
Sbjct: 413 AVSKAMTLSHRDSFGAWHLFHLLLLEYVIHILE 445
Score = 48 (22.0 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+++YHY GI +K S
Sbjct: 81 GSARYHYDGIYIKKSS 96
Score = 48 (22.0 bits), Expect = 4.1e-18, Sum P(2) = 4.1e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 GNSKYHYYGIRVKPDS 44
G+++YHY GI +K S
Sbjct: 81 GSARYHYDGIYIKKSS 96
>UNIPROTKB|E1BAR6 [details] [associations]
symbol:LOC100138955 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 OMA:DNFCICE EMBL:DAAA02030207
EMBL:DAAA02030208 IPI:IPI00838530 Ensembl:ENSBTAT00000048225
Uniprot:E1BAR6
Length = 586
Score = 245 (91.3 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 87/323 (26%), Positives = 144/323 (44%)
Query: 230 IESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLI 289
+E L FW+S + LS + L KC VQ Y+ + +VL+
Sbjct: 193 VEDLLMSFWKSLQQDT------VMLLSLPDVCRLLKCYDVQ---------LYKGIEDVLL 237
Query: 290 PDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNH 349
D L + S+R F+K + WL +A++G P + K+ V F + LRR T L++
Sbjct: 238 HDFLEDVSIQYLKSVRLFSKKFKLWLLSALEGFPALLQISKLKEVTVFVKRLRRKTYLSN 297
Query: 350 LAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDAS----LVQQLE----SDF 401
+A+ R VL+NS +++ + +DL + V + + V D S L + E S
Sbjct: 298 MAKTMRMVLRNSRRVSVLKSDLCTIFHQGVLDSSQKVLPRDLSGADVLGENTEMKCLSSL 357
Query: 402 KLTLQQQNSLEEWANWLK-NVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLR 460
L L + N L N+ V +P + F + A F L+W+F + V + +TL
Sbjct: 358 ISLLGTSTDLSVFMNCLSSNLQEFVFQPSRSREEFLQLAASFQLRWNFLLTAVSKAMTLC 417
Query: 461 SAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVESSQNPMDNGLYA 520
SFGS+HL LL EY+ ++++ + E + + KE P + S D+ +
Sbjct: 418 HRDSFGSWHLFHLLLSEYVIHILQSCIEEEEEEDNVGSL--KEILPDDQSPVQPDHEPH- 474
Query: 521 HGQNNILVHEELHISHAPKRIKL 543
H + E +S P R+ L
Sbjct: 475 HPPDCPPAQEHESLSADPPRVML 497
Score = 46 (21.3 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+++YHY GI +K S
Sbjct: 84 GSARYHYDGICIKRSS 99
Score = 46 (21.3 bits), Expect = 7.8e-18, Sum P(2) = 7.8e-18
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 GNSKYHYYGIRVKPDS 44
G+++YHY GI +K S
Sbjct: 84 GSARYHYDGICIKRSS 99
>UNIPROTKB|F1STG4 [details] [associations]
symbol:RFX8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 OMA:DNFCICE EMBL:CU424450
Ensembl:ENSSSCT00000008942 Uniprot:F1STG4
Length = 556
Score = 237 (88.5 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 87/325 (26%), Positives = 141/325 (43%)
Query: 230 IESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLI 289
+E L FW+S + +S + L KC VQ Y+ + ++L+
Sbjct: 168 VEGLLMSFWKSLQQDT------VMLMSLPDVCQLLKCYDVQ---------LYRGIEDILL 212
Query: 290 PDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNH 349
D L + S+R F+K + WL A++G P + K V F + LRR T L++
Sbjct: 213 HDFLEDVSIQYLKSVRLFSKKFKLWLLTALEGFPGLLQISKHKEVTVFVKRLRRKTYLSN 272
Query: 350 LAQAARAVLQNSTQINQMLTDLNRVDFHNVQEQASWVCQCDASLVQQLESDFKLT----- 404
+A+ R VL++S +++ + +DL+ + + D S LE D ++
Sbjct: 273 MAKTMRTVLKSSRRVSVLKSDLDAIIHRGTLGISKKALPRDLSSADDLEEDAEMKCLSSL 332
Query: 405 ---LQQQNSLEEWANWLK-NVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLR 460
L L + N L N+ V +P K F + A F L+W+F + V R +TL
Sbjct: 333 ISLLGMSTDLSVFLNCLSSNLQVFVFQPSRSKEEFIRLAASFQLRWNFLLTAVSRAMTLC 392
Query: 461 SAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVESSQNPM--DNGL 518
SFGS+HL LL EY+ +++ Q + E +G+ + E Q P+ D GL
Sbjct: 393 HRDSFGSWHLFHLLLLEYVIHIL--QSCIEEDEEDEDDVGNLQEELPEY-QWPVQPDQGL 449
Query: 519 YAHGQNNILVHEELHISHAPKRIKL 543
H + E S P R+ L
Sbjct: 450 -THPPESSPAQEHDSPSEEPLRVTL 473
Score = 53 (23.7 bits), Expect = 9.4e-18, Sum P(2) = 9.4e-18
Identities = 23/69 (33%), Positives = 34/69 (49%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLSDENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPRG 60
G+++YHY GI +K S L GG ++H G V +S N + E+G+
Sbjct: 59 GSARYHYDGICMKKSS-LFYAQYCYLLGGK-RFHS-GEVVAFESSTNYDSVLQEDGAC-- 113
Query: 61 KKYKLVKTD 69
+ LVKTD
Sbjct: 114 DSHSLVKTD 122
>UNIPROTKB|J9P0L9 [details] [associations]
symbol:RFX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:AAEX03007431
Ensembl:ENSCAFT00000049801 Uniprot:J9P0L9
Length = 540
Score = 235 (87.8 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 82/328 (25%), Positives = 151/328 (46%)
Query: 226 DFSTIESLWREFWRSQDNNNGDECEEEKYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLV 285
+F +E L FW+S L + + +S Q F + D Y+ +
Sbjct: 155 EFERVEDLLTSFWKS--------------LQQDTVMLMSLPDVCQLF-KYYDVQLYKGIE 199
Query: 286 EVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINI-KVTAVGAFAQMLRRY 344
++L+ D L + S+R F+K + WL NA++G P ++ I K+ V F + LRR
Sbjct: 200 DILLHDFLEDVSIQYLKSVRLFSKKFKLWLLNALEGFPA-LVQISKLKEVTVFVKRLRRK 258
Query: 345 TSLNHLAQAARAVLQNSTQINQMLTDLNRV-DFHNVQEQASWVCQCDASLVQ-QLESDFK 402
T L+++A+ R +L+N+ +++ + +DL+ + D + + +S V ++ ++ K
Sbjct: 259 TYLSNMAKTMRMLLENNRRVHILKSDLHAIIDQGTLDLSKKALPSTPSSSVDLEMHTEMK 318
Query: 403 LT------LQQQNSLEEWANWL-KNVVNAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIR 455
L L + N L N+ VL+P K F + A F L+W+F + V +
Sbjct: 319 CLSSLIALLGTSTDLSVFLNCLYSNLQTFVLQPSRNKEEFVQLAASFQLRWNFLLTAVSK 378
Query: 456 DLTLRSAASFGSFHLIRLLYDEYMFYLIEHQVALATGETPIAVIGSKESNPVESSQNPMD 515
+TL SFGS+HL LL E++ ++++ ++ + + + KE P + S D
Sbjct: 379 AMTLCHRESFGSWHLFHLLLLEFVTHILQSRIEEEEEDDDVGNL--KEMLPDDQSLVQPD 436
Query: 516 NGLYAHGQNNILVHEELHISHAPKRIKL 543
+ H ++ E S P R+ L
Sbjct: 437 QAPF-HPPDSSPTQEYDSPSVDPHRVTL 463
Score = 47 (21.6 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+++YHY GI +K S
Sbjct: 42 GSARYHYDGICIKKSS 57
Score = 47 (21.6 bits), Expect = 5.9e-17, Sum P(2) = 5.9e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 GNSKYHYYGIRVKPDS 44
G+++YHY GI +K S
Sbjct: 42 GSARYHYDGICIKKSS 57
>UNIPROTKB|Q6ZV50 [details] [associations]
symbol:RFX8 "DNA-binding protein RFX8" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0006351 EMBL:AK124976
EMBL:AK298610 EMBL:AC092570 IPI:IPI00442271 IPI:IPI00807444
IPI:IPI00969022 RefSeq:NP_001139136.1 UniGene:Hs.662488
ProteinModelPortal:Q6ZV50 SMR:Q6ZV50 PhosphoSite:Q6ZV50
DMDM:172046177 PRIDE:Q6ZV50 Ensembl:ENST00000376826
Ensembl:ENST00000428343 GeneID:731220 KEGG:hsa:731220
UCSC:uc002tbb.1 CTD:731220 GeneCards:GC02M102013 HGNC:HGNC:37253
neXtProt:NX_Q6ZV50 PharmGKB:PA165697419 eggNOG:NOG235455
HOGENOM:HOG000155476 HOVERGEN:HBG108690 InParanoid:Q6ZV50
OMA:DNFCICE OrthoDB:EOG42V8HP GenomeRNAi:731220 NextBio:133988
ArrayExpress:Q6ZV50 Bgee:Q6ZV50 Genevestigator:Q6ZV50
Uniprot:Q6ZV50
Length = 586
Score = 235 (87.8 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 74/284 (26%), Positives = 132/284 (46%)
Query: 253 KYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVE 312
K L + + +S Q F + D Y+ + +VL+ D L + S++ F+K +
Sbjct: 202 KSLQQDTVMLMSLPDVCQLF-KCYDVQLYKGIEDVLLHDFLEDVSIQYLKSVQLFSKKFK 260
Query: 313 SWLTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLN 372
WL NA++G P + K+ V F + LRR T L+++A+ R VL++ +++ + +DL
Sbjct: 261 LWLLNALEGVPALLQISKLKEVTLFVKRLRRKTYLSNMAKTMRMVLKSKRRVSVLKSDLQ 320
Query: 373 RVDFHNVQEQASWVCQCDASLVQQLESDFKLT--------LQQQNSLEEWANWLKNVVNA 424
+ + D S +LE++ ++ L L + + L + + A
Sbjct: 321 AIINQGTLATSKKALASDRSGADELENNPEMKCLRNLISLLGTSTDLRVFLSCLSSHLQA 380
Query: 425 -VLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLI 483
V + K FTK A F L+W+ + V + +TL SFGS+HL LL EYM +++
Sbjct: 381 FVFQTSRSKEEFTKLAASFQLRWNLLLTAVSKAMTLCHRDSFGSWHLFHLLLLEYMIHIL 440
Query: 484 EHQVALATGETPIAVIGSKESNPVESSQNPMDNGLYAHGQNNIL 527
+ + E + + KE P + + D L+ H N+ L
Sbjct: 441 QSCLEEEEEEEDMGTV--KEMLPDDPTLGQPDQALF-HSLNSSL 481
Score = 47 (21.6 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+++YHY GI +K S
Sbjct: 84 GSARYHYDGICIKKSS 99
Score = 47 (21.6 bits), Expect = 8.5e-17, Sum P(2) = 8.5e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 GNSKYHYYGIRVKPDS 44
G+++YHY GI +K S
Sbjct: 84 GSARYHYDGICIKKSS 99
>UNIPROTKB|E2RJY6 [details] [associations]
symbol:RFX8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 OMA:DNFCICE EMBL:AAEX03007431
Ensembl:ENSCAFT00000003441 Uniprot:E2RJY6
Length = 560
Score = 234 (87.4 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 77/301 (25%), Positives = 143/301 (47%)
Query: 253 KYLSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVE 312
K L + + +S Q F + D Y+ + ++L+ D L + S+R F+K +
Sbjct: 177 KSLQQDTVMLMSLPDVCQLF-KYYDVQLYKGIEDILLHDFLEDVSIQYLKSVRLFSKKFK 235
Query: 313 SWLTNAMQGCPQEMINI-KVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDL 371
WL NA++G P ++ I K+ V F + LRR T L+++A+ R +L+N+ +++ + +DL
Sbjct: 236 LWLLNALEGFPA-LVQISKLKEVTVFVKRLRRKTYLSNMAKTMRMLLENNRRVHILKSDL 294
Query: 372 NRV-DFHNVQEQASWVCQCDASLVQ-QLESDFKLT------LQQQNSLEEWANWL-KNVV 422
+ + D + + +S V ++ ++ K L L + N L N+
Sbjct: 295 HAIIDQGTLDLSKKALPSTPSSSVDLEMHTEMKCLSSLIALLGTSTDLSVFLNCLYSNLQ 354
Query: 423 NAVLKPFEGKPNFTKAARQFLLKWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYL 482
VL+P K F + A F L+W+F + V + +TL SFGS+HL LL E++ ++
Sbjct: 355 TFVLQPSRNKEEFVQLAASFQLRWNFLLTAVSKAMTLCHRESFGSWHLFHLLLLEFVTHI 414
Query: 483 IEHQVALATGETPIAVIGSKESNPVESSQNPMDNGLYAHGQNNILVHEELHISHAPKRIK 542
++ ++ + + + KE P + S D + H ++ E S P R+
Sbjct: 415 LQSRIEEEEEDDDVGNL--KEMLPDDQSLVQPDQAPF-HPPDSSPTQEYDSPSVDPHRVT 471
Query: 543 L 543
L
Sbjct: 472 L 472
Score = 47 (21.6 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 1 GNSKYHYYGIRVKPDS 16
G+++YHY GI +K S
Sbjct: 59 GSARYHYDGICIKKSS 74
Score = 47 (21.6 bits), Expect = 9.0e-17, Sum P(2) = 9.0e-17
Identities = 8/16 (50%), Positives = 12/16 (75%)
Query: 29 GNSKYHYYGIRVKPDS 44
G+++YHY GI +K S
Sbjct: 59 GSARYHYDGICIKKSS 74
>UNIPROTKB|F8VRD4 [details] [associations]
symbol:RFX4 "Transcription factor RFX4" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AC009721
EMBL:AC079385 HGNC:HGNC:9985 IPI:IPI01020778
ProteinModelPortal:F8VRD4 SMR:F8VRD4 Ensembl:ENST00000551640
ArrayExpress:F8VRD4 Bgee:F8VRD4 Uniprot:F8VRD4
Length = 256
Score = 115 (45.5 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 277 DFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESWLTNAMQGCPQEMINIK 330
D + Y+ + VL+P VL+ +P SLT IR FAK ++ WL A+ P+ + NIK
Sbjct: 201 DSILYKAISGVLMPTVLQALPDSLTQVIRKFAKQLDEWLKVALHDLPENLRNIK 254
Score = 111 (44.1 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 26/92 (28%), Positives = 43/92 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 90 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 146
Query: 133 RSIYREHCEAFLDAIVTLDFSTIESLWREFWR 164
+YR HC+ LD ++ +F ++S FW+
Sbjct: 147 IMMYRTHCQRILDTVIRANFDEVQSFLLHFWQ 178
Score = 71 (30.1 bits), Expect = 3.1e-07, Sum P(2) = 3.1e-07
Identities = 17/37 (45%), Positives = 20/37 (54%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDENG---SPRGKK 62
G SKYHYYGI VK S ++ S + S GKK
Sbjct: 68 GQSKYHYYGIAVKESSQYYDVMYSKKGAAWVSETGKK 104
Score = 66 (28.3 bits), Expect = 2.0e-14, Sum P(3) = 2.0e-14
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 68 GQSKYHYYGIAVKESSQYYDVMYS 91
>POMBASE|SPAC3G9.14 [details] [associations]
symbol:sak1 "transcriptional repressor Sak1" species:4896
"Schizosaccharomyces pombe" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IC]
[GO:0000790 "nuclear chromatin" evidence=IC] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0007346 "regulation of
mitotic cell cycle" evidence=IGI] [GO:0031536 "positive regulation
of exit from mitosis" evidence=IMP] InterPro:IPR003150 Pfam:PF02257
PROSITE:PS51526 PomBase:SPAC3G9.14 GO:GO:0005737 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0001078
Gene3D:1.10.10.10 InterPro:IPR011991 GO:GO:0000790 GO:GO:0031536
eggNOG:NOG264634 KO:K09175 OrthoDB:EOG4CNV0X EMBL:U19978 PIR:T11650
PIR:T52535 RefSeq:NP_594086.1 ProteinModelPortal:P48383
STRING:P48383 EnsemblFungi:SPAC3G9.14.1 GeneID:2543421
KEGG:spo:SPAC3G9.14 OMA:GESKYHY NextBio:20804436 Uniprot:P48383
Length = 766
Score = 94 (38.1 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 27/119 (22%), Positives = 55/119 (46%)
Query: 255 LSKSKLFCLSKCVPVQAFVRRVDFLFYQNLVEVLIPDVLRPIPGSLTSSIRNFAKGVESW 314
LS S L LS + ++ R D + Y+ ++++L P L+ +P + +R+ A+ + +
Sbjct: 427 LSPSLLALLSSPYFTK-WIERSDTVMYREILKLLFPMTLQVVPPPVLVLLRHLAENLVNH 485
Query: 315 LTNAMQGCPQEMINIKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNR 373
+++ ++ +K F+ +L R +N A AA L N + + D R
Sbjct: 486 ISSIYASHSSCLLQVKSETAAIFSNLLSRLLRVNDTAHAAARFLANPADRHLICNDWER 544
Score = 78 (32.5 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 25/100 (25%), Positives = 47/100 (47%)
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPN-FTKAA-RQFLL 444
C + L+ L+ + + N +E + V++ + F P+ F + R FLL
Sbjct: 577 CSNPSELLDPLKDKHEASDTSMNRVE--LRQIDGVLDRMADFFLELPSRFPSCSPRMFLL 634
Query: 445 KWSFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
+ V+R++T+ +FG+ +IR DEYM ++ E
Sbjct: 635 CLGALQTSVLREITVSGGEAFGALWVIRCWVDEYMTWVAE 674
Score = 58 (25.5 bits), Expect = 8.4e-06, Sum P(3) = 8.4e-06
Identities = 12/31 (38%), Positives = 18/31 (58%)
Query: 29 GNSKYHYYGIRVKPDSPLNNI-PLSDENGSP 58
G+SKYHY GI+++ + SD + SP
Sbjct: 163 GHSKYHYCGIKLRGQDSFRRLRTFSDSSLSP 193
Score = 51 (23.0 bits), Expect = 4.1e-05, Sum P(3) = 4.1e-05
Identities = 8/13 (61%), Positives = 12/13 (92%)
Query: 1 GNSKYHYYGIRVK 13
G+SKYHY GI+++
Sbjct: 163 GHSKYHYCGIKLR 175
Score = 38 (18.4 bits), Expect = 0.00079, Sum P(3) = 0.00079
Identities = 8/35 (22%), Positives = 17/35 (48%)
Query: 47 NNIPLSDENGSPRGKKYKLVKTDSNSNQYGSEGHT 81
N++ + N + GK +L+ + + G GH+
Sbjct: 131 NSLHIKPLNSASFGKLVRLLFPSIKTRRLGMRGHS 165
>UNIPROTKB|I3LDY8 [details] [associations]
symbol:I3LDY8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
GeneTree:ENSGT00550000074532 EMBL:CU633517 EMBL:CU618324
Ensembl:ENSSSCT00000030480 OMA:EQLEPAC Uniprot:I3LDY8
Length = 97
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIRVKPDSPLN +
Sbjct: 61 GNSKYHYYGIRVKPDSPLNRL 81
Score = 110 (43.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/21 (90%), Positives = 20/21 (95%)
Query: 29 GNSKYHYYGIRVKPDSPLNNI 49
GNSKYHYYGIRVKPDSPLN +
Sbjct: 61 GNSKYHYYGIRVKPDSPLNRL 81
>UNIPROTKB|K7EQA0 [details] [associations]
symbol:RFX2 "DNA-binding protein RFX2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:AC011444 HGNC:HGNC:9983 EMBL:AC011471
EMBL:AC104538 Ensembl:ENST00000586806 Uniprot:K7EQA0
Length = 147
Score = 108 (43.1 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 28/62 (45%), Positives = 35/62 (56%)
Query: 29 GNSKYHYYGIRVKPDSPLNNIPLSDE----NGSPRGKK--YKLV-KTDSNSNQYGSEG-H 80
GNSKYHYYGIR+KPDSPLN + + P +K Y+ KTDS + G H
Sbjct: 85 GNSKYHYYGIRLKPDSPLNRLQEDTQYMAMRQQPMHQKPRYRPAQKTDSLGDSGSHSGLH 144
Query: 81 TT 82
+T
Sbjct: 145 ST 146
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 85 GNSKYHYYGIRLKPDSPLNRL 105
>UNIPROTKB|K7EJD4 [details] [associations]
symbol:RFX2 "DNA-binding protein RFX2" species:9606 "Homo
sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 PROSITE:PS51526 Gene3D:1.10.10.10
InterPro:IPR011991 EMBL:AC011444 HGNC:HGNC:9983 EMBL:AC011471
EMBL:AC104538 Ensembl:ENST00000587321 Uniprot:K7EJD4
Length = 33
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 1 GNSKYHYYGIRVKPDSPLNNI 21
GNSKYHYYGIR+KPDSPLN +
Sbjct: 12 GNSKYHYYGIRLKPDSPLNRL 32
Score = 107 (42.7 bits), Expect = 4.0e-05, P = 4.0e-05
Identities = 18/21 (85%), Positives = 20/21 (95%)
Query: 29 GNSKYHYYGIRVKPDSPLNNI 49
GNSKYHYYGIR+KPDSPLN +
Sbjct: 12 GNSKYHYYGIRLKPDSPLNRL 32
>CGD|CAL0002122 [details] [associations]
symbol:RFX1 species:5476 "Candida albicans" [GO:0000978 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0031536
"positive regulation of exit from mitosis" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 CGD:CAL0002122
GO:GO:0006355 GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991
EMBL:AACQ01000125 EMBL:AACQ01000124 eggNOG:NOG264634 KO:K09175
RefSeq:XP_713492.1 RefSeq:XP_713532.1 ProteinModelPortal:Q59V88
GeneID:3644804 GeneID:3644844 KEGG:cal:CaO19.11346
KEGG:cal:CaO19.3865 Uniprot:Q59V88
Length = 851
Score = 115 (45.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 47/218 (21%), Positives = 91/218 (41%)
Query: 272 FVRRVDFLFYQNLVEVLIPDVLRP-IPGSLTSSIRNFAKGVESWLTNAM--QGCPQEMIN 328
+V + D + Y+ ++ +L L+ IP ++ A G L+ ++ Q +
Sbjct: 546 WVMKCDLIMYKKMIRMLSKLQLQLLIPQEQLLQLKQIADGYIKTLSTSLINSKVSQNFVM 605
Query: 329 IKVTAVGAFAQMLRRYTSLNHLAQAARAVLQNSTQINQMLTDLNRVDFHNV--QEQASWV 386
+K+ F +L R + Q A +L ++ + N M D ++D H + +E
Sbjct: 606 MKLKLAKHFVNLLNRLIKVIETGQPASRILNDNNEKNTMTQDWMKLDIHGIICREMPCND 665
Query: 387 CQCDASLVQQLESDFKLTLQQQNSLEEWANWLKNVVNAVLKPFEGKPNFTKAARQFLLKW 446
D +L L + + L + S E A + + N + P R FLL
Sbjct: 666 NNID-TLTYILTGEV-VNLIKVKSDNEQAPTMSDFANYISNLPSRFPEVN--TRLFLLLA 721
Query: 447 SFYSSMVIRDLTLRSAASFGSFHLIRLLYDEYMFYLIE 484
S + +R+++L FG++ ++R DEY+ + E
Sbjct: 722 SNLLTTCLREISLSGGEGFGAWWIVRCWIDEYLAWSFE 759
Score = 58 (25.5 bits), Expect = 0.00028, Sum P(2) = 0.00028
Identities = 20/92 (21%), Positives = 37/92 (40%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS-DENGGNSKYHYYGIRVKPDSPLNNIPLSDENGSPR 59
G SKYHY GI++ D + + L+ + + Y + + S ++ L+ SP
Sbjct: 344 GQSKYHYCGIKLTGDENMQSQLLNYQQKQKHQSQEQYNQQAQVGSSTSSAGLAGHQ-SPM 402
Query: 60 GKKYKLVKTDSNSNQYGSEGHTTAGQTNSNPS 91
V + + S HT + + P+
Sbjct: 403 SSCNSSVSYEESPGPIISRAHTPSFSPINTPT 434
>UNIPROTKB|B4DZB7 [details] [associations]
symbol:RFX4 "cDNA FLJ61497, highly similar to Homo sapiens
regulatory factor X 4, transcript variant 2, mRNA" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR003150 Pfam:PF02257 PROSITE:PS51526 GO:GO:0006355
GO:GO:0003677 Gene3D:1.10.10.10 InterPro:IPR011991 EMBL:AC009721
EMBL:AC079385 UniGene:Hs.388827 HGNC:HGNC:9985 HOGENOM:HOG000013104
EMBL:AK302837 IPI:IPI00910894 SMR:B4DZB7 STRING:B4DZB7
Ensembl:ENST00000536722 Uniprot:B4DZB7
Length = 247
Score = 89 (36.4 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 23/80 (28%), Positives = 37/80 (46%)
Query: 75 YGSEGHTTAGQTNSNP-SPQSGNHNFLGDGSNAIPDFPEI-DLSEDCLPEDCTIEDVDTF 132
Y +G +T S Q+ ++ +P+FP + DL+ LP E V TF
Sbjct: 154 YSKKGAAWVSETGKKEVSKQTVAYSPRSKLGTLLPEFPNVKDLN---LPASLPEEKVSTF 210
Query: 133 RSIYREHCEAFLDAIVTLDF 152
+YR HC+ LD ++ +F
Sbjct: 211 IMMYRTHCQRILDTVIRANF 230
Score = 66 (28.3 bits), Expect = 0.00084, Sum P(2) = 0.00084
Identities = 13/24 (54%), Positives = 15/24 (62%)
Query: 1 GNSKYHYYGIRVKPDSPLNNIPLS 24
G SKYHYYGI VK S ++ S
Sbjct: 132 GQSKYHYYGIAVKESSQYYDVMYS 155
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.134 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 544 544 0.00095 119 3 11 22 0.41 34
35 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 64
No. of states in DFA: 625 (66 KB)
Total size of DFA: 348 KB (2171 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 51.33u 0.13s 51.46t Elapsed: 00:00:04
Total cpu time: 51.35u 0.13s 51.48t Elapsed: 00:00:04
Start: Thu Aug 15 15:45:38 2013 End: Thu Aug 15 15:45:42 2013