RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7169
         (235 letters)



>d2yzca2 d.96.1.4 (A:142-297) Urate oxidase (uricase) {Arthrobacter
           globiformis [TaxId: 1665]}
          Length = 156

 Score = 25.9 bits (57), Expect = 3.3
 Identities = 16/57 (28%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 80  FTGFRK----ILKK-HDKLLNVDVGAKWRAEHVDISHFYVNKDINHLISETEATVTS 131
           F GF +     L++  D++L  DV A+WR   V++    V   +  L+ +  A   S
Sbjct: 22  FHGFPRDKYTTLQETTDRILATDVSARWRYNTVEVDFDAVYASVRGLLLKAFAETHS 78


>d2liga_ a.24.2.1 (A:) Aspartate receptor, ligand-binding domain
           {Salmonella typhimurium [TaxId: 90371]}
          Length = 157

 Score = 24.8 bits (54), Expect = 6.9
 Identities = 13/79 (16%), Positives = 27/79 (34%), Gaps = 6/79 (7%)

Query: 11  ATRKFSNLRNELKRSQEETMKSAK-----AKRKSALLLSRHKTDVPARKLQELKLAFSEY 65
           A R   +  N+   ++ + +++AK     A    A   +       A     +   +  Y
Sbjct: 47  AARMMMDASNQQSSAKTDLLQNAKTTLAQAAAHYANFKNMTPLPAMAEASANVDEKYQRY 106

Query: 66  YLSLILLQNY-QNLNFTGF 83
             +L  L  +  N N   +
Sbjct: 107 QAALAELIQFLDNGNMDAY 125


>d1j36a_ d.92.1.5 (A:) Angiotensin converting enzyme, ACE {Fruit fly
           (Drosophila melanogaster) [TaxId: 7227]}
          Length = 598

 Score = 25.1 bits (54), Expect = 9.7
 Identities = 12/66 (18%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 4   SMEKLAEATRKFSNLRNEL----KRSQEETMKSAKAKRKSALLLSRHKTDVPARKLQELK 59
           + +K  E + + +    E+     + Q  + +S   KR+   L       +P     EL 
Sbjct: 36  NEKKKNEISAELAKFMKEVASDTTKFQWRSYQSEDLKRQFKALTKLGYAALPEDDYAELL 95

Query: 60  LAFSEY 65
              S  
Sbjct: 96  DTLSAM 101


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.323    0.136    0.388 

Gapped
Lambda     K      H
   0.267   0.0663    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 807,051
Number of extensions: 35724
Number of successful extensions: 102
Number of sequences better than 10.0: 1
Number of HSP's gapped: 101
Number of HSP's successfully gapped: 7
Length of query: 235
Length of database: 2,407,596
Length adjustment: 83
Effective length of query: 152
Effective length of database: 1,268,006
Effective search space: 192736912
Effective search space used: 192736912
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 51 (23.6 bits)