BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7170
(137 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35926|CD5R2_MOUSE Cyclin-dependent kinase 5 activator 2 OS=Mus musculus GN=Cdk5r2
PE=3 SV=2
Length = 369
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 69/113 (61%), Positives = 87/113 (76%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D AFI PAN+VFVY+L RE + GD++ S ++LQA LTCLYL+YSYMGNEISYPLKPFLV
Sbjct: 227 DQAFITPANLVFVYLLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYPLKPFLV 286
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELKACGTSTPSTGLAP 135
E KE+FW RCL ++ +S MLR+NA+P FFT++F +LK G + STG P
Sbjct: 287 EPDKERFWQRCLRLIQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAASTGGPP 339
>sp|Q28199|CD5R1_BOVIN Cyclin-dependent kinase 5 activator 1 OS=Bos taurus GN=CDK5R1 PE=1
SV=1
Length = 307
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYSYMGNEISYPLKPFLV
Sbjct: 192 DQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLV 250
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 122
E CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 251 ESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|P61810|CD5R1_RAT Cyclin-dependent kinase 5 activator 1 OS=Rattus norvegicus
GN=Cdk5r1 PE=1 SV=1
Length = 307
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYSYMGNEISYPLKPFLV
Sbjct: 192 DQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLV 250
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 122
E CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 251 ESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|P61809|CD5R1_MOUSE Cyclin-dependent kinase 5 activator 1 OS=Mus musculus GN=Cdk5r1
PE=1 SV=1
Length = 307
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYSYMGNEISYPLKPFLV
Sbjct: 192 DQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLV 250
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 122
E CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 251 ESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|Q15078|CD5R1_HUMAN Cyclin-dependent kinase 5 activator 1 OS=Homo sapiens GN=CDK5R1
PE=1 SV=1
Length = 307
Score = 150 bits (380), Expect = 2e-36, Method: Compositional matrix adjust.
Identities = 67/100 (67%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYSYMGNEISYPLKPFLV
Sbjct: 192 DQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYSYMGNEISYPLKPFLV 250
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 122
E CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 251 ESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|Q4KYY2|CD5R1_SPECI Cyclin-dependent kinase 5 activator 1 OS=Spermophilus citellus
GN=CDK5R1 PE=2 SV=1
Length = 307
Score = 147 bits (372), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 66/100 (66%), Positives = 84/100 (84%), Gaps = 1/100 (1%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYSY+GNEISYPLKPFLV
Sbjct: 192 DQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYSYVGNEISYPLKPFLV 250
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 122
E CKE FWDRCL ++N MSS ML+INA+P +FT+ F++LK
Sbjct: 251 ESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQAFSDLK 290
>sp|Q13319|CD5R2_HUMAN Cyclin-dependent kinase 5 activator 2 OS=Homo sapiens GN=CDK5R2
PE=1 SV=1
Length = 367
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 64/100 (64%), Positives = 81/100 (81%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPLKPFLV 82
D AFI PAN+VFVY+L RE + GD++ S ++LQA LTCLYL+YSYMGNEISYPLKPFLV
Sbjct: 227 DQAFITPANLVFVYLLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISYPLKPFLV 286
Query: 83 EDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 122
E KE+FW RCL ++ +S MLR+NA+P FFT++F +LK
Sbjct: 287 EPDKERFWQRCLRLIQRLSPQMLRLNADPHFFTQVFQDLK 326
>sp|Q22695|CD5R1_CAEEL Cyclin-dependent kinase 5 activator 1 OS=Caenorhabditis elegans
GN=cdka-1 PE=2 SV=2
Length = 356
Score = 126 bits (316), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/107 (51%), Positives = 83/107 (77%), Gaps = 2/107 (1%)
Query: 23 DVAFINPANVVFVYMLVRELVDGDK--IDSESQLQAVVLTCLYLSYSYMGNEISYPLKPF 80
D+AFINPAN+VF+++LVR+++ ++ I + +L A +L+CLY+SYSYMGNEISYPLKPF
Sbjct: 249 DIAFINPANLVFIFLLVRDVLPDERHLIHTLEELHAWILSCLYVSYSYMGNEISYPLKPF 308
Query: 81 LVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELKACGTS 127
L+ + + FW+RC+ +V + S ML +N+ FF+E+FT+LK C +S
Sbjct: 309 LIGNDRNTFWNRCVAMVTSHSRQMLLLNSSSTFFSEVFTDLKHCSSS 355
>sp|Q9Y827|YEX5_SCHPO Uncharacterized protein C1A6.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1A6.05c PE=4 SV=1
Length = 483
Score = 30.4 bits (67), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 59 LTCLYLSYSYMGNEISYPLKPFLVEDCKEKFWDRC----LHIVNNMSSSMLRINAEPGFF 114
LT L+ ++ +++++ + PF+++ + +RC + + S R+ AE G F
Sbjct: 339 LTELFHVNHFIVSQVNFHIVPFIMDPTSHNWVERCCKKAIDLAAQEVSLTFRLFAELGIF 398
Query: 115 TEIFTELKACGTS 127
+ +FT+L++ T
Sbjct: 399 SVLFTKLQSVITQ 411
>sp|Q8L710|CRK17_ARATH Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis
thaliana GN=CRK17 PE=2 SV=2
Length = 686
Score = 30.0 bits (66), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 47/121 (38%), Gaps = 26/121 (21%)
Query: 37 MLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPL-KPFLVEDCK--------- 86
+L+ E++ G K S Q+ +V + + N+ + L PF+ EDCK
Sbjct: 549 VLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVH 608
Query: 87 -------EKFWDR----CLHIVNNMSSSMLRINAEPGFFTEIFTELKACGTSTPSTGLAP 135
E DR +H V SS L + PGFF G++ S G+ P
Sbjct: 609 IGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFR-----NGPGSNPSSQGMVP 663
Query: 136 S 136
Sbjct: 664 G 664
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,206,650
Number of Sequences: 539616
Number of extensions: 1820567
Number of successful extensions: 3419
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 3404
Number of HSP's gapped (non-prelim): 16
length of query: 137
length of database: 191,569,459
effective HSP length: 102
effective length of query: 35
effective length of database: 136,528,627
effective search space: 4778501945
effective search space used: 4778501945
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)