BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7171
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35926|CD5R2_MOUSE Cyclin-dependent kinase 5 activator 2 OS=Mus musculus GN=Cdk5r2
PE=3 SV=2
Length = 369
Score = 153 bits (386), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 71/120 (59%), Positives = 89/120 (74%)
Query: 25 LRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISY 84
L L D AFI PAN+VFVY+L RE + GD++ S ++LQA LTCLYL+YSYMGNEISY
Sbjct: 220 LLLQGWQDQAFITPANLVFVYLLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISY 279
Query: 85 PLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELKACGTSTPSTGLAP 144
PLKPFLVE KE+FW RCL ++ +S MLR+NA+P FFT++F +LK G + STG P
Sbjct: 280 PLKPFLVEPDKERFWQRCLRLIQRLSPQMLRLNADPHFFTQVFQDLKNEGEAAASTGGPP 339
>sp|Q28199|CD5R1_BOVIN Cyclin-dependent kinase 5 activator 1 OS=Bos taurus GN=CDK5R1 PE=1
SV=1
Length = 307
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
Query: 19 WLFPV--PLRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYS 76
WL V L L D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYS
Sbjct: 177 WLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYS 235
Query: 77 YMGNEISYPLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 131
YMGNEISYPLKPFLVE CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 236 YMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|P61810|CD5R1_RAT Cyclin-dependent kinase 5 activator 1 OS=Rattus norvegicus
GN=Cdk5r1 PE=1 SV=1
Length = 307
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
Query: 19 WLFPV--PLRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYS 76
WL V L L D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYS
Sbjct: 177 WLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYS 235
Query: 77 YMGNEISYPLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 131
YMGNEISYPLKPFLVE CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 236 YMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|P61809|CD5R1_MOUSE Cyclin-dependent kinase 5 activator 1 OS=Mus musculus GN=Cdk5r1
PE=1 SV=1
Length = 307
Score = 151 bits (382), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
Query: 19 WLFPV--PLRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYS 76
WL V L L D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYS
Sbjct: 177 WLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYS 235
Query: 77 YMGNEISYPLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 131
YMGNEISYPLKPFLVE CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 236 YMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|Q15078|CD5R1_HUMAN Cyclin-dependent kinase 5 activator 1 OS=Homo sapiens GN=CDK5R1
PE=1 SV=1
Length = 307
Score = 151 bits (381), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 72/115 (62%), Positives = 90/115 (78%), Gaps = 3/115 (2%)
Query: 19 WLFPV--PLRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYS 76
WL V L L D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYS
Sbjct: 177 WLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYS 235
Query: 77 YMGNEISYPLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 131
YMGNEISYPLKPFLVE CKE FWDRCL ++N MSS ML+INA+P +FT++F++LK
Sbjct: 236 YMGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQVFSDLK 290
>sp|Q4KYY2|CD5R1_SPECI Cyclin-dependent kinase 5 activator 1 OS=Spermophilus citellus
GN=CDK5R1 PE=2 SV=1
Length = 307
Score = 148 bits (373), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 71/115 (61%), Positives = 89/115 (77%), Gaps = 3/115 (2%)
Query: 19 WLFPV--PLRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYS 76
WL V L L D FI PANVVF+YML R+++ + + S+ +LQAV+LTCLYLSYS
Sbjct: 177 WLRSVDRSLLLQGWQDQGFITPANVVFLYMLCRDVISSE-VGSDHELQAVLLTCLYLSYS 235
Query: 77 YMGNEISYPLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELK 131
Y+GNEISYPLKPFLVE CKE FWDRCL ++N MSS ML+INA+P +FT+ F++LK
Sbjct: 236 YVGNEISYPLKPFLVESCKEAFWDRCLSVINLMSSKMLQINADPHYFTQAFSDLK 290
>sp|Q13319|CD5R2_HUMAN Cyclin-dependent kinase 5 activator 2 OS=Homo sapiens GN=CDK5R2
PE=1 SV=1
Length = 367
Score = 147 bits (371), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 67/110 (60%), Positives = 84/110 (76%)
Query: 25 LRLSEINDVAFINPANVVFVYMLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISY 84
L L D AFI PAN+VFVY+L RE + GD++ S ++LQA LTCLYL+YSYMGNEISY
Sbjct: 220 LLLQGWQDQAFITPANLVFVYLLCRESLRGDELASAAELQAAFLTCLYLAYSYMGNEISY 279
Query: 85 PLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIFTELKACG 134
PLKPFLVE KE+FW RCL ++ +S MLR+NA+P FFT++F +LK G
Sbjct: 280 PLKPFLVEPDKERFWQRCLRLIQRLSPQMLRLNADPHFFTQVFQDLKNEG 329
>sp|Q22695|CD5R1_CAEEL Cyclin-dependent kinase 5 activator 1 OS=Caenorhabditis elegans
GN=cdka-1 PE=2 SV=2
Length = 356
Score = 126 bits (316), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 61/129 (47%), Positives = 90/129 (69%), Gaps = 4/129 (3%)
Query: 12 DHLAIACWLFPV--PLRLSEINDVAFINPANVVFVYMLVRELVDGDK--IDSESQLQAVV 67
D + WL V L L D+AFINPAN+VF+++LVR+++ ++ I + +L A +
Sbjct: 227 DPAHLVTWLRSVDRSLLLQGWQDIAFINPANLVFIFLLVRDVLPDERHLIHTLEELHAWI 286
Query: 68 LTCLYLSYSYMGNEISYPLKPFLVEDCKEKFWDRCLHIVNNMSSSMLRINAEPGFFTEIF 127
L+CLY+SYSYMGNEISYPLKPFL+ + + FW+RC+ +V + S ML +N+ FF+E+F
Sbjct: 287 LSCLYVSYSYMGNEISYPLKPFLIGNDRNTFWNRCVAMVTSHSRQMLLLNSSSTFFSEVF 346
Query: 128 TELKACGTS 136
T+LK C +S
Sbjct: 347 TDLKHCSSS 355
>sp|Q86TW2|ADCK1_HUMAN Uncharacterized aarF domain-containing protein kinase 1 OS=Homo
sapiens GN=ADCK1 PE=2 SV=2
Length = 530
Score = 35.0 bits (79), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 14/25 (56%), Positives = 18/25 (72%)
Query: 1 MLGVVGLRMGDDHLAIACWLFPVPL 25
+L V GL++ D LA+ CWLFP PL
Sbjct: 506 ILRVKGLKLADRVLALICWLFPAPL 530
>sp|Q9Y827|YEX5_SCHPO Uncharacterized protein C1A6.05c OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC1A6.05c PE=4 SV=1
Length = 483
Score = 30.0 bits (66), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 18/76 (23%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 68 LTCLYLSYSYMGNEISYPLKPFLVEDCKEKFWDRC----LHIVNNMSSSMLRINAEPGFF 123
LT L+ ++ +++++ + PF+++ + +RC + + S R+ AE G F
Sbjct: 339 LTELFHVNHFIVSQVNFHIVPFIMDPTSHNWVERCCKKAIDLAAQEVSLTFRLFAELGIF 398
Query: 124 TEIFTELKACGTSTPS 139
+ +FT+L++ T S
Sbjct: 399 SVLFTKLQSVITQKYS 414
>sp|Q8L710|CRK17_ARATH Cysteine-rich receptor-like protein kinase 17 OS=Arabidopsis
thaliana GN=CRK17 PE=2 SV=2
Length = 686
Score = 29.6 bits (65), Expect = 7.1, Method: Compositional matrix adjust.
Identities = 31/120 (25%), Positives = 47/120 (39%), Gaps = 26/120 (21%)
Query: 46 MLVRELVDGDKIDSESQLQAVVLTCLYLSYSYMGNEISYPL-KPFLVEDCK--------- 95
+L+ E++ G K S Q+ +V + + N+ + L PF+ EDCK
Sbjct: 549 VLILEIISGKKNSSFYQMDGLVNNLVTYVWKLWENKTMHELIDPFIKEDCKSDEVIRYVH 608
Query: 96 -------EKFWDR----CLHIVNNMSSSMLRINAEPGFFTEIFTELKACGTSTPSTGLAP 144
E DR +H V SS L + PGFF G++ S G+ P
Sbjct: 609 IGLLCVQENPADRPTMSTIHQVLTTSSITLPVPQPPGFFFR-----NGPGSNPSSQGMVP 663
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.139 0.428
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 53,035,329
Number of Sequences: 539616
Number of extensions: 1921527
Number of successful extensions: 3421
Number of sequences better than 100.0: 11
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 2
Number of HSP's that attempted gapping in prelim test: 3405
Number of HSP's gapped (non-prelim): 11
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 55 (25.8 bits)