Psyllid ID: psy7174

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MFEVCFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP
Secondary Structure (PSIPRED)
ccccccccccccccccHHHHHHHHHHHHHHHHHccccccccccccEEEEccccHHHHcccccccccHHHHHHHHHHHHHHHHHcccccccccccccccccEEEccccccccccccccccEEEEEEcccccccHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHcccccccccc
Secondary Structure Prediction (SSPRO)
ccHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHcccccccccEEEccccEEEccccHHHcccccccccEEEEEEEccccHHHHccccccccHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
mfevcfkpfqqskwspntpmarcdvnvetqakaegkqdrrLDYANIIQYLslpvetlqpttlstssdYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYctrgapellfGARMYGVGIDMWAVGCIICELllkapflpgesdlDQLTRIFQtlgtpsedtwp
Flexible Loop (DISEMBL)
mfevcfkpfqqskwspntpmaRCDVNVETqakaegkqdrrlDYANIIQYLSLpvetlqpttlstssdyiVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQtlgtpsedtwp
Low Complexity Region (SEG)
MFEVCFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP
Disordered region (IsUnstruct)
***************************************RLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT**********
Disordered Region (DISOPRED)
*FEVCFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS****P
Disordered Region (DISEMBL)
MFEVCFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG********
Disordered Region (DISPRO)
MFEVCFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW*
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MFEVCFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	188	2.2.26 [Sep-21-2011]
Q03147	346	Cyclin-dependent kinase 7	yes	N/A	0.313	0.170	0.830	2e-25
P50613	346	Cyclin-dependent kinase 7	yes	N/A	0.313	0.170	0.830	2e-25
P51952	329	Cyclin-dependent kinase 7	yes	N/A	0.313	0.179	0.830	2e-25
P20911	352	Cyclin-dependent kinase 7	N/A	N/A	0.313	0.167	0.813	3e-25
P51953	344	Cyclin-dependent kinase 7	N/A	N/A	0.313	0.171	0.779	5e-23
Q9LMT0	391	Cyclin-dependent kinase D	yes	N/A	0.313	0.150	0.627	3e-18
Q9C9M7	348	Cyclin-dependent kinase D	no	N/A	0.308	0.166	0.620	2e-17
P24788	784	Cyclin-dependent kinase 1	no	N/A	0.313	0.075	0.593	3e-17
Q12126	335	Serine/threonine-protein	yes	N/A	0.531	0.298	0.447	4e-17
Q9C9U2	398	Cyclin-dependent kinase D	no	N/A	0.313	0.148	0.610	4e-17

>sp|Q03147|CDK7_MOUSE Cyclin-dependent kinase 7 OS=Mus musculus GN=Cdk7 PE=1 SV=2

 Score =  115 bits (288), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.
Mus musculus (taxid: 10090)
EC: 2EC: .EC: 7EC: .EC: 1EC: 1EC: .EC: 2EC: 3

>sp|P50613|CDK7_HUMAN Cyclin-dependent kinase 7 OS=Homo sapiens GN=CDK7 PE=1 SV=1

 Score =  115 bits (288), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P51952|CDK7_RAT Cyclin-dependent kinase 7 (Fragment) OS=Rattus norvegicus GN=Cdk7 PE=2 SV=2

 Score =  115 bits (287), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 172 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 230

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of CDK1/cyclin-B during G2-M transition, and for activation of CDK2/cyclins during G1-S transition (but not complex formation). CDK7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. Phosphorylates SPT5/SUPT5H, SF1/NR5A1, POLR2A, p53/TP53, CDK1, CDK2, CDK4, CDK6 and CDK11B/CDK11. CAK activates the cyclin-associated kinases CDK1, CDK2, CDK4 and CDK6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (POLR2A), allowing its escape from the promoter and elongation of the transcripts. Phosphorylation of POLR2A in complex with DNA promotes transcription initiation by triggering dissociation from DNA. Its expression and activity are constant throughout the cell cycle. Upon DNA damage, triggers p53/TP53 activation by phosphorylation, but is inactivated in turn by p53/TP53; this feedback loop may lead to an arrest of the cell cycle and of the transcription, helping in cell recovery, or to apoptosis. Required for DNA-bound peptides-mediated transcription and cellular growth inhibition.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P20911|CDK7_XENLA Cyclin-dependent kinase 7 OS=Xenopus laevis GN=cdk7 PE=1 SV=1

 Score =  114 bits (286), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 48/59 (81%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           +PELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 186 SPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 244

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of cdk1/cyclin-B during G2-M transition, and for activation of cdk2/cyclins during G1-S transition (but not complex formation). cdk7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. CAK activates the cyclin-associated kinases cdk1, cdk2, cdk4 and cdk6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (polr2a), allowing its escape from the promoter and elongation of the transcripts (By similarity). Involved in negative regulation of the meiotic maturation of Xenopus oocytes.

Xenopus laevis (taxid: 8355)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P51953|CDK7_CARAU Cyclin-dependent kinase 7 OS=Carassius auratus GN=cdk7 PE=2 SV=1

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 46/59 (77%), Positives = 53/59 (89%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVG I+ ELLL+ PFL G+SDLDQLT IF+ LGTP+E+TWP
Sbjct: 179 APELLFGARMYGVGVDMWAVGSILAELLLRVPFLAGDSDLDQLTGIFEALGTPTEETWP 237

Serine/threonine kinase involved in cell cycle control and in RNA polymerase II-mediated RNA transcription. Cyclin-dependent kinases (CDKs) are activated by the binding to a cyclin and mediate the progression through the cell cycle. Each different complex controls a specific transition between 2 subsequent phases in the cell cycle. Required for both activation and complex formation of cdk1/cyclin-B during G2-M transition, and for activation of cdk2/cyclins during G1-S transition (but not complex formation). cdk7 is the catalytic subunit of the CDK-activating kinase (CAK) complex. CAK activates the cyclin-associated kinases cdk1, cdk2, cdk4 and cdk6 by threonine phosphorylation, thus regulating cell cycle progression. CAK complexed to the core-TFIIH basal transcription factor activates RNA polymerase II by serine phosphorylation of the repetitive C-terminus domain (CTD) of its large subunit (polr2a), allowing its escape from the promoter and elongation of the transcripts.

Carassius auratus (taxid: 7957)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9LMT0|CDKD3_ARATH Cyclin-dependent kinase D-3 OS=Arabidopsis thaliana GN=CDKD-3 PE=1 SV=1

 Score = 91.3 bits (225), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 37/59 (62%), Positives = 44/59 (74%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGA+ YG  +D+WAV CI  ELLL+ PFL G SD+DQL++IF   GTP  D WP
Sbjct: 177 APELLFGAKQYGAAVDVWAVACIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWP 235

May form a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9C9M7|CDKD2_ARATH Cyclin-dependent kinase D-2 OS=Arabidopsis thaliana GN=CDKD-2 PE=1 SV=1

 Score = 89.0 bits (219), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 36/58 (62%), Positives = 44/58 (75%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 187
           APELLFG+R YG G+D+WA GCI  ELLL+ PFLPG +++DQL +IFQ  GTP    W
Sbjct: 178 APELLFGSRQYGAGVDVWAAGCIFAELLLRRPFLPGSTEIDQLGKIFQAFGTPVPSQW 235

Forms a stable complex with cyclin CYCH1-1 that phosphorylates human CDK2 and the C-terminal domain (CTD) of the large subunit of RNA polymerase II.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|P24788|CD11B_MOUSE Cyclin-dependent kinase 11B OS=Mus musculus GN=Cdk11b PE=1 SV=2

 Score = 88.2 bits (217), Expect = 3e-17,   Method: Composition-based stats.
 Identities = 35/59 (59%), Positives = 44/59 (74%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL GA+ Y   +DMW+VGCI  ELL + P  PG+SD+DQ+ +IF+ LGTPSE  WP
Sbjct: 594 APELLLGAKEYSTAVDMWSVGCIFGELLTQKPLFPGKSDIDQINKIFKDLGTPSEKIWP 652

Acts as a negative regulator of the normal cell cycle progression. In vitro, this protein kinase has been shown to phosphorylate a number of substrates, including histone h1, casein, and galactosyltransferase. May function in regulating proliferation by the phosphorylation and subsequent plasma membrane targeting of galactosyltransferase.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 2

>sp|Q12126|CRK1_SCHPO Serine/threonine-protein kinase crk1 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=crk1 PE=1 SV=1

 Score = 87.8 bits (216), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 47/105 (44%), Positives = 59/105 (56%), Gaps = 5/105 (4%)

Query: 80  ARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTR--GAPELLFGA 137
           +RF  H     N  ++     LK +   L + F   G   H+     TR    PEL  G 
Sbjct: 126 SRFILHRDLKPNNLLISSDGVLKLADFGLSRDF---GTPSHMSHQVITRWYRPPELFMGC 182

Query: 138 RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           R YG G+DMW+VGCI  EL+L+ P+LPGESDLDQL  IF+ LGTP
Sbjct: 183 RSYGTGVDMWSVGCIFAELMLRTPYLPGESDLDQLNVIFRALGTP 227

Protein kinase essential for cell proliferation, where it is required for completion of cytokinesis. Phosphorylates the C-terminal repeat domain (CTD) of RNA polymerase II.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

>sp|Q9C9U2|CDKD1_ARATH Cyclin-dependent kinase D-1 OS=Arabidopsis thaliana GN=CDKD-1 PE=1 SV=1

 Score = 87.4 bits (215), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 36/59 (61%), Positives = 43/59 (72%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGA+ Y   +D+WA GCI  ELLL+ PFL G SD+DQL++IF   GTP  D WP
Sbjct: 176 APELLFGAKQYDGAVDVWAAGCIFAELLLRRPFLQGNSDIDQLSKIFAAFGTPKADQWP 234

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 7

EC: .

EC: 1

EC: 1

EC: .

EC: 2

EC: 3

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
327263175	343	PREDICTED: cyclin-dependent kinase 7-lik	0.313	0.172	0.830	3e-24
395510426	328	PREDICTED: cyclin-dependent kinase 7 [Sa	0.313	0.179	0.830	4e-24
380016700	338	PREDICTED: cyclin-dependent kinase 7-lik	0.313	0.174	0.847	4e-24
383860799	338	PREDICTED: cyclin-dependent kinase 7-lik	0.313	0.174	0.847	4e-24
449510361	343	PREDICTED: cyclin-dependent kinase 7 [Ta	0.505	0.276	0.613	5e-24
110757430	321	PREDICTED: cyclin-dependent kinase 7 [Ap	0.313	0.183	0.847	6e-24
26333031	252	unnamed protein product [Mus musculus]	0.313	0.234	0.830	6e-24
149584761	324	PREDICTED: cyclin-dependent kinase 7-lik	0.313	0.182	0.830	7e-24
395048	346	protein kinase [Mus musculus]	0.313	0.170	0.830	7e-24
160333726	346	cyclin-dependent kinase 7 [Mus musculus]	0.313	0.170	0.830	8e-24

>gi|327263175|ref|XP_003216396.1| PREDICTED: cyclin-dependent kinase 7-like [Anolis carolinensis]

 Score =  117 bits (292), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 57/59 (96%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+APFLPG+SDLDQLT+IF+TLGTP+E+ WP
Sbjct: 178 APELLFGARMYGVGVDMWAVGCILAELLLRAPFLPGDSDLDQLTKIFETLGTPTEEQWP 236

Source: Anolis carolinensis

Species: Anolis carolinensis

Genus: Anolis

Family: Iguanidae

Order: Squamata

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395510426|ref|XP_003759476.1| PREDICTED: cyclin-dependent kinase 7 [Sarcophilus harrisii]

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Source: Sarcophilus harrisii

Species: Sarcophilus harrisii

Genus: Sarcophilus

Family: Dasyuridae

Order: Dasyuromorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|380016700|ref|XP_003692313.1| PREDICTED: cyclin-dependent kinase 7-like [Apis florea]

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL+GAR+YG GIDMWAVGCI+ ELLL+ PFLPGESDLDQLTRIFQTLGTP+E+TWP
Sbjct: 176 APELLYGARLYGTGIDMWAVGCILAELLLRVPFLPGESDLDQLTRIFQTLGTPTEETWP 234

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383860799|ref|XP_003705876.1| PREDICTED: cyclin-dependent kinase 7-like [Megachile rotundata]

 Score =  116 bits (291), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL+GAR+YG GIDMWAVGCI+ ELLL+ PFLPGESDLDQLTRIFQTLGTP+E+TWP
Sbjct: 176 APELLYGARLYGTGIDMWAVGCILAELLLRVPFLPGESDLDQLTRIFQTLGTPTEETWP 234

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|449510361|ref|XP_002199171.2| PREDICTED: cyclin-dependent kinase 7 [Taeniopygia guttata]

 Score =  116 bits (290), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 62/101 (61%), Positives = 72/101 (71%), Gaps = 6/101 (5%)

Query: 91  NQQILEGLQALKSSMPALLKKFVGIGIGRHVCTL-YCTR--GAPELLFGARMYGVGIDMW 147
           N  +L+G   LK +   L K F   G    V T    TR   APELLFGARMYGVG+DMW
Sbjct: 139 NNLLLDGNGVLKLADFGLAKSF---GSPNRVYTHQVVTRWYRAPELLFGARMYGVGVDMW 195

Query: 148 AVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 196 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 236

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|110757430|ref|XP_395800.3| PREDICTED: cyclin-dependent kinase 7 [Apis mellifera]

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 50/59 (84%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL+GAR+YG GIDMWAVGCI+ ELLL+ PFLPGESDLDQLTRIFQTLGTP+E+TWP
Sbjct: 159 APELLYGARLYGTGIDMWAVGCILAELLLRVPFLPGESDLDQLTRIFQTLGTPTEETWP 217

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|26333031|dbj|BAC30233.1| unnamed protein product [Mus musculus]

 Score =  115 bits (289), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|149584761|ref|XP_001506541.1| PREDICTED: cyclin-dependent kinase 7-like, partial [Ornithorhynchus anatinus]

 Score =  115 bits (289), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 158 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 216

Source: Ornithorhynchus anatinus

Species: Ornithorhynchus anatinus

Genus: Ornithorhynchus

Family: Ornithorhynchidae

Order: Monotremata

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|395048|emb|CAA52242.1| protein kinase [Mus musculus]

 Score =  115 bits (288), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|160333726|ref|NP_034004.2| cyclin-dependent kinase 7 [Mus musculus] gi|1705723|sp|Q03147.2|CDK7_MOUSE RecName: Full=Cyclin-dependent kinase 7; AltName: Full=39 kDa protein kinase; Short=P39 Mo15; AltName: Full=CDK-activating kinase; AltName: Full=CR4 protein kinase; Short=CRK4; AltName: Full=Cell division protein kinase 7; AltName: Full=Protein-tyrosine kinase MPK-7; AltName: Full=TFIIH basal transcription factor complex kinase subunit gi|562024|gb|AAA64831.1| MO15-associated kinase [Mus musculus] gi|45768758|gb|AAH68160.1| Cdk7 protein [Mus musculus] gi|74212138|dbj|BAE40231.1| unnamed protein product [Mus musculus] gi|74217064|dbj|BAE26631.1| unnamed protein product [Mus musculus] gi|117616306|gb|ABK42171.1| Cdk7 [synthetic construct] gi|148668477|gb|EDL00796.1| cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase), isoform CRA_a [Mus musculus] gi|187954821|gb|AAI41044.1| Cyclin-dependent kinase 7 (homolog of Xenopus MO15 cdk-activating kinase) [Mus musculus]

 Score =  115 bits (288), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

Source: Mus musculus

Species: Mus musculus

Genus: Mus

Family: Muridae

Order: Rodentia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	188
UNIPROTKB|E1C8L2	294	CDK7 "Uncharacterized protein"	0.505	0.323	0.603	3.6e-25
UNIPROTKB|Q08DX5	346	CDK7 "Cyclin-dependent kinase	0.313	0.170	0.830	1.2e-24
UNIPROTKB|E2R8R2	347	CDK7 "Uncharacterized protein"	0.313	0.170	0.830	1.2e-24
UNIPROTKB|E2R8R3	346	CDK7 "Uncharacterized protein"	0.313	0.170	0.830	1.2e-24
UNIPROTKB|D6R9G1	253	CDK7 "Cyclin-dependent kinase	0.313	0.233	0.830	1.2e-24
UNIPROTKB|D6RAD4	309	CDK7 "Cyclin-dependent kinase	0.313	0.190	0.830	1.2e-24
UNIPROTKB|D6REC6	149	CDK7 "Cyclin-dependent kinase	0.313	0.395	0.830	1.2e-24
UNIPROTKB|P50613	346	CDK7 "Cyclin-dependent kinase	0.313	0.170	0.830	1.2e-24
UNIPROTKB|C9K505	346	CDK7 "Uncharacterized protein"	0.313	0.170	0.830	1.2e-24
MGI|MGI:102956	346	Cdk7 "cyclin-dependent kinase	0.313	0.170	0.830	1.2e-24

UNIPROTKB|E1C8L2 CDK7 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 286 (105.7 bits), Expect = 3.6e-25, P = 3.6e-25
 Identities = 61/101 (60%), Positives = 72/101 (71%)

Query:    91 NQQILEGLQALKSSMPALLKKFVGIGIGRHVCT-LYCTRG--APELLFGARMYGVGIDMW 147
             N  +L+G   LK +   L K F   G    V T    TR   +PELLFGARMYGVG+DMW
Sbjct:   139 NNLLLDGNGVLKLADFGLAKSF---GSPNRVYTHQVVTRWYRSPELLFGARMYGVGVDMW 195

Query:   148 AVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             AVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   196 AVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 236

GO:0005524 "ATP binding" evidence=IEA

GO:0005675 "holo TFIIH complex" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

UNIPROTKB|Q08DX5 CDK7 "Cyclin-dependent kinase 7" [Bos taurus (taxid:9913)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005675 "holo TFIIH complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R8R2 CDK7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   181 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 239

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IEA

GO:0008094 "DNA-dependent ATPase activity" evidence=IEA

GO:0008022 "protein C-terminus binding" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0005675 "holo TFIIH complex" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

UNIPROTKB|E2R8R3 CDK7 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

UNIPROTKB|D6R9G1 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:    87 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 145

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|D6RAD4 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   143 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 201

GO:0004672 "protein kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|D6REC6 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:    87 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 145

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|P50613 CDK7 "Cyclin-dependent kinase 7" [Homo sapiens (taxid:9606)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

GO:0005524 "ATP binding" evidence=IEA

GO:0051301 "cell division" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=IDA

GO:0003713 "transcription coactivator activity" evidence=NAS

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=NAS

GO:0050681 "androgen receptor binding" evidence=NAS

GO:0006366 "transcription from RNA polymerase II promoter" evidence=IDA;TAS

GO:0004672 "protein kinase activity" evidence=IDA

GO:0008022 "protein C-terminus binding" evidence=IPI

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0030521 "androgen receptor signaling pathway" evidence=NAS

GO:0005675 "holo TFIIH complex" evidence=IDA

GO:0008094 "DNA-dependent ATPase activity" evidence=IDA

GO:0007050 "cell cycle arrest" evidence=TAS

GO:0000079 "regulation of cyclin-dependent protein serine/threonine kinase activity" evidence=TAS

GO:0008283 "cell proliferation" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006281 "DNA repair" evidence=TAS

GO:0006283 "transcription-coupled nucleotide-excision repair" evidence=TAS

GO:0006289 "nucleotide-excision repair" evidence=TAS

GO:0006360 "transcription from RNA polymerase I promoter" evidence=TAS

GO:0006361 "transcription initiation from RNA polymerase I promoter" evidence=TAS

GO:0006362 "transcription elongation from RNA polymerase I promoter" evidence=TAS

GO:0006363 "termination of RNA polymerase I transcription" evidence=TAS

GO:0006367 "transcription initiation from RNA polymerase II promoter" evidence=TAS

GO:0006368 "transcription elongation from RNA polymerase II promoter" evidence=TAS

GO:0006370 "7-methylguanosine mRNA capping" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

GO:0016032 "viral reproduction" evidence=TAS

GO:0050434 "positive regulation of viral transcription" evidence=TAS

GO:0000080 "G1 phase of mitotic cell cycle" evidence=TAS

GO:0000082 "G1/S transition of mitotic cell cycle" evidence=TAS

GO:0000084 "S phase of mitotic cell cycle" evidence=TAS

GO:0000086 "G2/M transition of mitotic cell cycle" evidence=TAS

GO:0000278 "mitotic cell cycle" evidence=TAS

GO:0000718 "nucleotide-excision repair, DNA damage removal" evidence=TAS

GO:0005737 "cytoplasm" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA

UNIPROTKB|C9K505 CDK7 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

GO:0005634 "nucleus" evidence=IEA

GO:0005524 "ATP binding" evidence=IEA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

MGI|MGI:102956 Cdk7 "cyclin-dependent kinase 7" [Mus musculus (taxid:10090)]

 Score = 281 (104.0 bits), Expect = 1.2e-24, P = 1.2e-24
 Identities = 49/59 (83%), Positives = 56/59 (94%)

Query:   130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct:   180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

GO:0000166 "nucleotide binding" evidence=IEA

GO:0004672 "protein kinase activity" evidence=ISO;IDA

GO:0004674 "protein serine/threonine kinase activity" evidence=IEA

GO:0004693 "cyclin-dependent protein serine/threonine kinase activity" evidence=ISO;ISS

GO:0005515 "protein binding" evidence=IPI

GO:0005524 "ATP binding" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005675 "holo TFIIH complex" evidence=ISO

GO:0005737 "cytoplasm" evidence=IEA

GO:0005829 "cytosol" evidence=ISO

GO:0005856 "cytoskeleton" evidence=ISO

GO:0006281 "DNA repair" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006366 "transcription from RNA polymerase II promoter" evidence=ISO

GO:0006468 "protein phosphorylation" evidence=IEA;ISO;ISS;IDA

GO:0006974 "response to DNA damage stimulus" evidence=IEA

GO:0007049 "cell cycle" evidence=ISS

GO:0008022 "protein C-terminus binding" evidence=ISO

GO:0008094 "DNA-dependent ATPase activity" evidence=ISO

GO:0008353 "RNA polymerase II carboxy-terminal domain kinase activity" evidence=ISO

GO:0016020 "membrane" evidence=ISO

GO:0016301 "kinase activity" evidence=IDA

GO:0016310 "phosphorylation" evidence=IDA

GO:0016740 "transferase activity" evidence=IEA

GO:0016772 "transferase activity, transferring phosphorus-containing groups" evidence=IEA

GO:0032403 "protein complex binding" evidence=ISO

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=ISO

GO:0051301 "cell division" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	188
cd07841	298	cd07841, STKc_CDK7, Catalytic domain of the Serine	6e-37
cd07829	282	cd07829, STKc_CDK_like, Catalytic domain of Cyclin	1e-30
cd07832	286	cd07832, STKc_CCRK, Catalytic domain of the Serine	1e-27
cd07843	293	cd07843, STKc_CDC2L1, Catalytic domain of the Seri	7e-27
cd05118	283	cd05118, STKc_CMGC, Catalytic domain of CMGC famil	2e-26
cd07840	287	cd07840, STKc_CDK9_like, Catalytic domain of Cycli	4e-26
cd07835	283	cd07835, STKc_CDK1_like, Catalytic domain of Cycli	2e-24
PTZ00024	335	PTZ00024, PTZ00024, cyclin-dependent protein kinas	9e-24
cd07866	311	cd07866, STKc_BUR1, Catalytic domain of the Serine	4e-22
cd07837	295	cd07837, STKc_CdkB_plant, Catalytic domain of the	2e-21
PLN00009	294	PLN00009, PLN00009, cyclin-dependent kinase A; Pro	5e-21
cd07845	309	cd07845, STKc_CDK10, Catalytic domain of the Serin	5e-21
cd07860	284	cd07860, STKc_CDK2_3, Catalytic domain of the Seri	2e-20
cd07861	285	cd07861, STKc_CDK1_euk, Catalytic domain of the Se	2e-20
cd07834	330	cd07834, STKc_MAPK, Catalytic domain of the Serine	1e-19
cd07830	283	cd07830, STKc_MAK_like, Catalytic domain of Male g	2e-19
cd07833	288	cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dep	4e-19
cd07839	284	cd07839, STKc_CDK5, Catalytic domain of the Serine	8e-19
cd07838	287	cd07838, STKc_CDK4_6_like, Catalytic domain of Cyc	8e-19
cd07842	316	cd07842, STKc_CDK8_like, Catalytic domain of Cycli	4e-18
cd07844	291	cd07844, STKc_PCTAIRE_like, Catalytic domain of PC	9e-18
cd07852	337	cd07852, STKc_MAPK15, Catalytic domain of the Seri	9e-18
cd07836	284	cd07836, STKc_Pho85, Catalytic domain of the Serin	2e-17
PTZ00036	440	PTZ00036, PTZ00036, glycogen synthase kinase; Prov	6e-17
cd07857	332	cd07857, STKc_MPK1, Catalytic domain of the Serine	1e-15
cd07846	286	cd07846, STKc_CDKL2_3, Catalytic domain of the Ser	3e-15
cd07847	286	cd07847, STKc_CDKL1_4, Catalytic domain of the Ser	1e-14
cd07872	309	cd07872, STKc_PCTAIRE2, Catalytic domain of the Se	2e-14
cd07849	336	cd07849, STKc_ERK1_2_like, Catalytic domain of Ext	2e-14
cd07869	303	cd07869, STKc_PFTAIRE1, Catalytic domain of the Se	2e-14
cd07873	301	cd07873, STKc_PCTAIRE1, Catalytic domain of the Se	4e-14
cd07871	288	cd07871, STKc_PCTAIRE3, Catalytic domain of the Se	5e-14
cd07855	334	cd07855, STKc_ERK5, Catalytic domain of the Serine	7e-14
pfam00069	260	pfam00069, Pkinase, Protein kinase domain	2e-13
cd07858	337	cd07858, STKc_TEY_MAPK_plant, Catalytic domain of	3e-13
cd07865	310	cd07865, STKc_CDK9, Catalytic domain of the Serine	3e-13
cd07851	343	cd07851, STKc_p38, Catalytic domain of the Serine/	4e-13
cd07862	290	cd07862, STKc_CDK6, Catalytic domain of the Serine	6e-13
cd07863	288	cd07863, STKc_CDK4, Catalytic domain of the Serine	1e-12
cd07870	291	cd07870, STKc_PFTAIRE2, Catalytic domain of the Se	1e-12
cd07831	282	cd07831, STKc_MOK, Catalytic domain of the Serine/	2e-12
cd07864	302	cd07864, STKc_CDK12, Catalytic domain of the Serin	1e-11
cd07868	317	cd07868, STKc_CDK8, Catalytic domain of the Serine	2e-11
cd07848	287	cd07848, STKc_CDKL5, Catalytic domain of the Serin	2e-11
cd07867	317	cd07867, STKc_CDC2L6, Catalytic domain of Serine/T	3e-11
cd07880	343	cd07880, STKc_p38gamma_MAPK12, Catalytic domain of	5e-11
cd07856	328	cd07856, STKc_Sty1_Hog1, Catalytic domain of the S	8e-11
cd07853	372	cd07853, STKc_NLK, Catalytic domain of the Serine/	1e-10
cd07878	343	cd07878, STKc_p38beta_MAPK11, Catalytic domain of	2e-10
cd07854	342	cd07854, STKc_MAPK4_6, Catalytic domain of the Ser	5e-10
smart00220	254	smart00220, S_TKc, Serine/Threonine protein kinase	8e-10
cd07877	345	cd07877, STKc_p38alpha_MAPK14, Catalytic domain of	1e-09
cd07859	338	cd07859, STKc_TDY_MAPK_plant, Catalytic domain of	3e-09
cd07850	353	cd07850, STKc_JNK, Catalytic domain of the Serine/	4e-09
cd07876	359	cd07876, STKc_JNK2, Catalytic domain of the Serine	2e-07
cd07879	342	cd07879, STKc_p38delta_MAPK13, Catalytic domain of	2e-07
cd07875	364	cd07875, STKc_JNK1, Catalytic domain of the Serine	5e-07
cd07874	355	cd07874, STKc_JNK3, Catalytic domain of the Serine	1e-06
cd06629	272	cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain o	3e-04
COG0515	384	COG0515, SPS1, Serine/threonine protein kinase [Ge	6e-04
PTZ00266	1021	PTZ00266, PTZ00266, NIMA-related protein kinase; P	0.002
cd00180	215	cd00180, PKc, Catalytic domain of Protein Kinases	0.002
cd05123	250	cd05123, STKc_AGC, Catalytic domain of AGC family	0.003

>gnl|CDD|143346 cd07841, STKc_CDK7, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

 Score =  129 bits (326), Expect = 6e-37
 Identities = 43/59 (72%), Positives = 52/59 (88%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGAR YGVG+DMW+VGCI  ELLL+ PFLPG+SD+DQL +IF+ LGTP+E+ WP
Sbjct: 170 APELLFGARHYGVGVDMWSVGCIFAELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP 228

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is also a component of the general transcription factor TFIIH, which phosphorylates the C-terminal domain (CTD) of RNA polymerase II when it is bound with unphosphorylated DNA, as present in the pre-initiation complex. Following phosphorylation, the CTD dissociates from the DNA which allows transcription initiation. Length = 298

>gnl|CDD|173733 cd07829, STKc_CDK_like, Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

 Score =  112 bits (283), Expect = 1e-30
 Identities = 30/59 (50%), Positives = 45/59 (76%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G++ Y   +D+W+VGCI  E++   P  PG+S++DQL +IFQ LGTP+E++WP
Sbjct: 166 APEILLGSKHYSTAVDIWSVGCIFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP 224

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the early G1 phase by CDK4 or CDK6, the G1/S phase transition by CDK2, or the entry of mitosis by CDK1. They also exhibit overlapping cyclin specificity and functions in certain conditions. Knockout mice with a single CDK deleted remain viable with specific phenotypes, showing that some CDKs can compensate for each other. For example, CDK4 can compensate for the loss of CDK6, however, double knockout mice with both CDK4 and CDK6 deleted die in utero. CDK8 and CDK9 are mainly involved in transcription while CDK5 is implicated in neuronal function. CDK7 plays essential roles in both the cell cycle as a CDK-Activating Kinase (CAK) and in transcription as a component of the general transcription factor TFIIH. Length = 282

>gnl|CDD|173736 cd07832, STKc_CCRK, Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

 Score =  105 bits (263), Expect = 1e-27
 Identities = 37/59 (62%), Positives = 48/59 (81%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL+GAR Y  G+D+WAVGCI  ELL  +P  PGE+D++QL  +F+TLGTP+E+TWP
Sbjct: 168 APELLYGARKYDPGVDLWAVGCIFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP 226

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of heart failure. Length = 286

>gnl|CDD|173741 cd07843, STKc_CDC2L1, Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

 Score =  102 bits (257), Expect = 7e-27
 Identities = 36/59 (61%), Positives = 44/59 (74%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL GA+ Y   IDMW+VGCI  ELL K P  PG+S++DQL +IF+ LGTP+E  WP
Sbjct: 174 APELLLGAKEYSTAIDMWSVGCIFAELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP 232

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the major isoform, associates with cyclin L and is expressed throughout the cell cycle. It is involved in RNA processing and the regulation of transcription. CDK11(p58) associates with cyclin D3 and is expressed during the G2/M phase of the cell cycle. It plays roles in spindle morphogenesis, centrosome maturation, sister chromatid cohesion, and the completion of mitosis. CDK11(p46) is formed from the larger isoforms by caspases during TNFalpha- and Fas-induced apoptosis. It functions as a downstream effector kinase in apoptotic signaling pathways and interacts with eukaryotic initiation factor 3f (eIF3f), p21-activated kinase (PAK1), and Ran-binding protein (RanBPM). Length = 293

>gnl|CDD|143333 cd05118, STKc_CMGC, Catalytic domain of CMGC family Serine/Threonine Kinases

 Score =  101 bits (253), Expect = 2e-26
 Identities = 32/59 (54%), Positives = 43/59 (72%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL G + Y   +D+W+VGCI  ELL + P  PG+S++DQL +IF+TLGTP  + WP
Sbjct: 166 APELLLGDKGYSTPVDIWSVGCIFAELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWP 224

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Length = 283

>gnl|CDD|143345 cd07840, STKc_CDK9_like, Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

 Score =  100 bits (252), Expect = 4e-26
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 4/70 (5%)

Query: 120 HVCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT 178
            V TL Y  R  PELL GA  YG  +DMW+VGCI+ EL L  P   G ++L+QL +IF+ 
Sbjct: 161 RVITLWY--R-PPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFEL 217

Query: 179 LGTPSEDTWP 188
            G+P+++ WP
Sbjct: 218 CGSPTDENWP 227

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA polymerase II and participate in regulating mutliple steps of gene expression including transcription elongation and RNA processing. CDK9 and CdkC associate with T-type cyclins while BUR1 associates with the cyclin BUR2. CDK12 is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 interacts with cyclins L1 and L2, and participates in regulating transcription and alternative splicing. Length = 287

>gnl|CDD|173738 cd07835, STKc_CDK1_like, Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

 Score = 95.8 bits (239), Expect = 2e-24
 Identities = 32/59 (54%), Positives = 45/59 (76%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G+R Y   +D+W++GCI  E++ + P  PG+S++DQL RIF+TLGTP ED WP
Sbjct: 167 APEILLGSRQYSTPVDIWSIGCIFAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVWP 225

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression while the CDK1/cyclin B complex is critical for G2 to M phase transition. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. Studies in knockout mice revealed that CDK1 can compensate for the loss of the cdk2 gene as it can also bind cyclin E and drive G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 283

>gnl|CDD|240233 PTZ00024, PTZ00024, cyclin-dependent protein kinase; Provisional

 Score = 95.2 bits (237), Expect = 9e-24
 Identities = 36/59 (61%), Positives = 43/59 (72%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL GA  Y   +DMW+VGCI  ELL   P  PGE+++DQL RIF+ LGTP+ED WP
Sbjct: 201 APELLMGAEKYHFAVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWP 259

Length = 335

>gnl|CDD|143371 cd07866, STKc_BUR1, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

 Score = 90.5 bits (225), Expect = 4e-22
 Identities = 29/59 (49%), Positives = 40/59 (67%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
            PELL G R Y   +D+W +GC+  E+  + P L G+SD+DQL  IF+  GTP+E+TWP
Sbjct: 194 PPELLLGERRYTTAVDIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWP 252

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic screen as factors involved in general transcription. The BUR1/BUR2 complex phosphorylates the C-terminal domain of RNA polymerase II. In addition, this complex regulates histone modification by phosporylating Rad6 and mediating the association of the Paf1 complex with chromatin. Length = 311

>gnl|CDD|143342 cd07837, STKc_CdkB_plant, Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

 Score = 87.9 bits (218), Expect = 2e-21
 Identities = 30/59 (50%), Positives = 40/59 (67%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G+  Y   +D+W+VGCI  E+  K P  PG+S+L QL  IF+ LGTP+E  WP
Sbjct: 179 APEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVWP 237

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developmental pathways, such as stomata and leaf development. CdkB has been shown to associate with both cyclin B, which controls G2/M transition, and cyclin D, which acts as a mediator in linking extracellular signals to the cell cycle. Length = 295

>gnl|CDD|177649 PLN00009, PLN00009, cyclin-dependent kinase A; Provisional

 Score = 87.2 bits (216), Expect = 5e-21
 Identities = 30/59 (50%), Positives = 46/59 (77%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G+R Y   +D+W+VGCI  E++ + P  PG+S++D+L +IF+ LGTP+E+TWP
Sbjct: 171 APEILLGSRHYSTPVDIWSVGCIFAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETWP 229

Length = 294

>gnl|CDD|173742 cd07845, STKc_CDK10, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

 Score = 87.4 bits (217), Expect = 5e-21
 Identities = 35/59 (59%), Positives = 41/59 (69%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL G   Y   IDMWAVGCI+ ELL   P LPG+S+++QL  I Q LGTP+E  WP
Sbjct: 176 APELLLGCTTYTTAIDMWAVGCILAELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP 234

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing increases the transcription of c-RAF and the activation of the p42/p44 MAPK pathway, which leads to antiestrogen resistance. Patients who express low levels of CDK10 relapse early on tamoxifen. Length = 309

>gnl|CDD|173751 cd07860, STKc_CDK2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

 Score = 85.6 bits (212), Expect = 2e-20
 Identities = 29/59 (49%), Positives = 42/59 (71%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 168 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 226

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex plays a role in regulating DNA replication. CDK2, together with CDK4, also regulates embryonic cell proliferation. Despite these important roles, mice deleted for the cdk2 gene are viable and normal except for being sterile. This may be due to compensation provided by CDK1 (also called Cdc2), which can also bind cyclin E and drive the G1 to S phase transition. CDK3 is regulated by cyclin C and it phosphorylates pRB specifically during the G0/G1 transition. This phosphorylation is required for cells to exit G0 efficiently and enter the G1 phase. Length = 284

>gnl|CDD|173752 cd07861, STKc_CDK1_euk, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

 Score = 85.5 bits (212), Expect = 2e-20
 Identities = 29/59 (49%), Positives = 41/59 (69%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G+  Y   +D+W++G I  E+  K P   G+S++DQL RIF+ LGTP+ED WP
Sbjct: 169 APEVLLGSPRYSTPVDIWSIGTIFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVWP 227

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2 phase entry and progression. CDK1/cyclin A2 has also been implicated as an important regulator of S phase events. The CDK1/cyclin B complex is critical for G2 to M phase transition. It induces mitosis by activating nuclear enzymes that regulate chromatin condensation, nuclear membrane degradation, mitosis-specific microtubule and cytoskeletal reorganization. CDK1 also associates with cyclin E and plays a role in the entry into S phase. CDK1 transcription is stable throughout the cell cycle but is modulated in some pathological conditions. It may play a role in regulating apoptosis under these conditions. In breast cancer cells, HER2 can mediate apoptosis by inactivating CDK1. Activation of CDK1 may contribute to HIV-1 induced apoptosis and neuronal apoptosis in neurodegenerative diseases. Length = 285

>gnl|CDD|173737 cd07834, STKc_MAPK, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

 Score = 83.7 bits (208), Expect = 1e-19
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APELL  +  Y   ID+W+VGCI  ELL + P  PG   +DQL  I + LGTPSE+
Sbjct: 174 APELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEE 229

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and activated by a MAPK kinase (MAP2K or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAP3K or MKKK). Each cascade is activated either by a small GTP-binding protein or by an adaptor protein, which transmits the signal either directly to a MAP3K to start the triple kinase core cascade or indirectly through a mediator kinase, a MAP4K. There are three main typical MAPK subfamilies: Extracellular signal-Regulated Kinase (ERK), c-Jun N-terminal Kinase (JNK), and p38. Some MAPKs are atypical in that they are not regulated by MAP2Ks. These include MAPK4, MAPK6, NLK, and ERK7. Length = 330

>gnl|CDD|173734 cd07830, STKc_MAK_like, Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

 Score = 82.6 bits (205), Expect = 2e-19
 Identities = 27/59 (45%), Positives = 38/59 (64%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +D+WA+GCI+ EL    P  PG S++DQL +I   LGTP++  WP
Sbjct: 166 APEILLRSTSYSSPVDIWALGCIMAELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDWP 224

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertility. It functions as a coactivator of the androgen receptor in prostate cells. MRK, also called Intestinal Cell Kinase (ICK), is expressed ubiquitously, with highest expression in the ovary and uterus. A missense mutation in MRK causes endocrine-cerebro-osteodysplasia (ECO), suggesting that this protein plays an important role in the development of many organs. MAK and MRK may be involved in regulating cell cycle and cell fate. Ime2p is a meiosis-specific kinase that is important during meiotic initiation and during the later stages of meiosis. Mde3 functions downstream of the transcription factor Mei-4 which is essential for meiotic prophase I. Length = 283

>gnl|CDD|143338 cd07833, STKc_CDKL, Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

 Score = 82.0 bits (203), Expect = 4e-19
 Identities = 32/67 (47%), Positives = 39/67 (58%), Gaps = 3/67 (4%)

Query: 118 GRHVCTLY-CTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR 174
                T Y  TR   APELL G   YG  +D+WA+GCI+ ELL   P  PG+SD+DQL  
Sbjct: 154 PASPLTDYVATRWYRAPELLVGDTNYGKPVDVWAIGCIMAELLDGEPLFPGDSDIDQLYL 213

Query: 175 IFQTLGT 181
           I + LG 
Sbjct: 214 IQKCLGP 220

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning and memory. Length = 288

>gnl|CDD|143344 cd07839, STKc_CDK5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

 Score = 81.3 bits (201), Expect = 8e-19
 Identities = 31/60 (51%), Positives = 40/60 (66%), Gaps = 1/60 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDTWP 188
            P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+ LGTP+E++WP
Sbjct: 167 PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESWP 226

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also important in synaptic plasticity and learning. CDK5 also participates in protecting against cell death and promoting angiogenesis. Impaired CDK5 activity is implicated in Alzheimer's disease, amyotrophic lateral sclerosis, Parkinson's disease, Huntington's disease and acute neuronal injury. Length = 284

>gnl|CDD|173739 cd07838, STKc_CDK4_6_like, Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

 Score = 81.1 bits (201), Expect = 8e-19
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  EL  + P   G S+ DQL +IF  +G PSE+ WP
Sbjct: 174 APEVLLQSS-YATPVDMWSVGCIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEWP 231

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both expressed ubiquitously, associate with all three D cyclins (D1, D2 and D3), and phosphorylate the retinoblastoma (pRb) protein. They are also regulated by the INK4 family of inhibitors which associate with either the CDK alone or the CDK/cyclin complex. CDK4 and CDK6 show differences in subcellular localization, sensitivity to some inhibitors, timing in activation, tumor selectivity, and possibly substrate profiles. Although CDK4 and CDK6 seem to show some redundancy, they also have discrete, nonoverlapping functions. CDK6 plays an important role in cell differentiation. Length = 287

>gnl|CDD|173740 cd07842, STKc_CDK8_like, Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

 Score = 79.6 bits (197), Expect = 4e-18
 Identities = 34/68 (50%), Positives = 38/68 (55%), Gaps = 9/68 (13%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLG 180
           APELL GAR Y   ID+WA+GCI  ELL   P   G             DQL RIF+ LG
Sbjct: 183 APELLLGARHYTKAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLG 242

Query: 181 TPSEDTWP 188
           TP+E  WP
Sbjct: 243 TPTEKDWP 250

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDC2L6 also associates with Mediator in complexes lacking CDK8. In VP16-dependent transcriptional activation, CDK8 and CDC2L6 exerts opposing effects by positive and negative regulation, respectively, in similar conditions. Length = 316

>gnl|CDD|143349 cd07844, STKc_PCTAIRE_like, Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

 Score = 78.6 bits (194), Expect = 9e-18
 Identities = 29/59 (49%), Positives = 39/59 (66%), Gaps = 1/59 (1%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDTWP 188
           P++L G+  Y   +DMW VGCI  E+    P  PG +D  DQL +IF+ LGTP+E+TWP
Sbjct: 172 PDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP 230

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the membrane-associated cyclin Y. PCTAIRE-like proteins show unusual expression patterns with high levels in post-mitotic tissues, suggesting that they may be involved in regulating post-mitotic cellular events. Length = 291

>gnl|CDD|173747 cd07852, STKc_MAPK15, Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

 Score = 78.8 bits (195), Expect = 9e-18
 Identities = 28/56 (50%), Positives = 39/56 (69%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE+L G+  Y  G+DMW+VGCI+ E+LL  P  PG S L+QL +I + +G PS +
Sbjct: 180 APEILLGSTRYTKGVDMWSVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPPSAE 235

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimuli whereas ERK8 shows low basal activity and is activated by DNA-damaging agents. ERK7 and ERK8 also have different substrate profiles. Genome analysis shows that they are orthologs with similar gene structures. ERK7 and ERK 8 may be involved in the signaling of some nuclear receptor transcription factors. ERK7 regulates hormone-dependent degradation of estrogen receptor alpha while ERK8 down-regulates the transcriptional co-activation androgen and glucocorticoid receptors. Length = 337

>gnl|CDD|143341 cd07836, STKc_Pho85, Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

 Score = 77.5 bits (191), Expect = 2e-17
 Identities = 29/59 (49%), Positives = 43/59 (72%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G+R Y   ID+W+VGCI+ E++   P  PG ++ DQL +IF+ +GTP+E TWP
Sbjct: 168 APDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTWP 226

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment. It is not essential for yeast viability and is the functional homolog of mammalian CDK5, which plays a role in central nervous system development. Length = 284

>gnl|CDD|173333 PTZ00036, PTZ00036, glycogen synthase kinase; Provisional

 Score = 77.4 bits (190), Expect = 6e-17
 Identities = 34/70 (48%), Positives = 46/70 (65%), Gaps = 2/70 (2%)

Query: 118 GRHVCTLYCTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 175
           G+   +  C+R   APEL+ GA  Y   ID+W++GCII E++L  P   G+S +DQL RI
Sbjct: 224 GQRSVSYICSRFYRAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRI 283

Query: 176 FQTLGTPSED 185
            Q LGTP+ED
Sbjct: 284 IQVLGTPTED 293

Length = 440

>gnl|CDD|173750 cd07857, STKc_MPK1, Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

 Score = 73.2 bits (180), Expect = 1e-15
 Identities = 27/57 (47%), Positives = 38/57 (66%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++   + Y   ID+W+VGCI+ ELL + P   G+  +DQL +I Q LGTP E+T
Sbjct: 177 APEIMLSFQSYTKAIDVWSVGCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDEET 233

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall construction, morphogenesis, and ion homeostasis. MPK1 is activated in response to cell wall stress including heat stimulation, osmotic shock, UV irradiation, and any agents that interfere with cell wall biogenesis such as chitin antagonists, caffeine, or zymolase. MPK1 is regulated by the MAP2Ks Mkk1/2, which are regulated by the MAP3K Bck1. Pmk1 is also activated by multiple stresses including elevated temperatures, hyper- or hypotonic stress, glucose deprivation, exposure to cell-wall damaging compounds, and oxidative stress. It is regulated by the MAP2K Pek1, which is regulated by the MAP3K Mkh1. Length = 332

>gnl|CDD|173743 cd07846, STKc_CDKL2_3, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

 Score = 71.3 bits (175), Expect = 3e-15
 Identities = 32/64 (50%), Positives = 40/64 (62%), Gaps = 3/64 (4%)

Query: 121 VCTLY-CTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 177
           V T Y  TR   APELL G   YG  +D+WAVGC++ E+L   P  PG+SD+DQL  I +
Sbjct: 156 VYTDYVATRWYRAPELLVGDTKYGRAVDIWAVGCLVTEMLTGEPLFPGDSDIDQLYHIIK 215

Query: 178 TLGT 181
            LG 
Sbjct: 216 CLGN 219

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKIAMRE (NKIATRE in rat), by translocation is associated with mild mental retardation. It has been reported that CDKL3 is lost in leukemic cells having a chromosome arm 5q deletion, and may contribute to the transformed phenotype. Length = 286

>gnl|CDD|173744 cd07847, STKc_CDKL1_4, Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

 Score = 70.1 bits (172), Expect = 1e-14
 Identities = 28/51 (54%), Positives = 35/51 (68%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           APELL G   YG  +D+WA+GC+  ELL   P  PG+SD+DQL  I +TLG
Sbjct: 168 APELLVGDTQYGPPVDVWAIGCVFAELLTGQPLWPGKSDVDQLYLIRKTLG 218

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The function of CDKL4 is unknown. Length = 286

>gnl|CDD|143377 cd07872, STKc_PCTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

 Score = 69.6 bits (170), Expect = 2e-14
 Identities = 28/58 (48%), Positives = 37/58 (63%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           P++L G+  Y   IDMW VGCI  E+    P  PG +  D+L  IF+ LGTP+E+TWP
Sbjct: 173 PDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWP 230

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play a role in regulating mitochondrial function in neurons. Length = 309

>gnl|CDD|143354 cd07849, STKc_ERK1_2_like, Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

 Score = 69.6 bits (171), Expect = 2e-14
 Identities = 25/56 (44%), Positives = 36/56 (64%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  L QL  I   LGTPS++
Sbjct: 177 APEIMLNSKGYTKAIDIWSVGCILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE 232

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase kinase from the Raf family. ERK1/2 have numerous substrates, many of which are nuclear and participate in transcriptional regulation of many cellular processes. They regulate cell growth, cell proliferation, and cell cycle progression from G1 to S phase. Although the distinct roles of ERK1 and ERK2 have not been fully determined, it is known that ERK2 can maintain most functions in the absence of ERK1, and that the deletion of ERK2 is embryonically lethal. The MAPK, Fus3, regulates yeast mating processes including mating-specific gene expression, G1 arrest, mating projection, and cell fusion. Length = 336

>gnl|CDD|143374 cd07869, STKc_PFTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

 Score = 69.3 bits (169), Expect = 2e-14
 Identities = 30/59 (50%), Positives = 38/59 (64%), Gaps = 1/59 (1%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL-DQLTRIFQTLGTPSEDTWP 188
           P++L G+  Y   +DMW VGCI  E++      PG  D+ DQL RIF  LGTP+EDTWP
Sbjct: 172 PDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP 230

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 and is inhibited by the p21 cell cycle inhibitor. It has also been shown to interact with the membrane-associated cyclin Y, which recruits the protein to the plasma membrane. Length = 303

>gnl|CDD|143378 cd07873, STKc_PCTAIRE1, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

 Score = 68.5 bits (167), Expect = 4e-14
 Identities = 28/58 (48%), Positives = 37/58 (63%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           P++L G+  Y   IDMW VGCI  E+    P  PG +  +QL  IF+ LGTP+E+TWP
Sbjct: 173 PDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWP 230

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may play a role in regulating neurite outgrowth. It can also associate with Trap (Tudor repeat associator with PCTAIRE-2), a physiological partner of PCTAIRE-2; with p11, a small dimeric protein with similarity to S100; and with 14-3-3 proteins, mediators of phosphorylation-dependent interactions in many different proteins. Length = 301

>gnl|CDD|143376 cd07871, STKc_PCTAIRE3, Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

 Score = 68.1 bits (166), Expect = 5e-14
 Identities = 27/58 (46%), Positives = 38/58 (65%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           P++L G+  Y   IDMW VGCI+ E+    P  PG +  ++L  IF+ LGTP+E+TWP
Sbjct: 172 PDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP 229

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filaments (PHFs) and stimulate Tau phosphorylation. As AD progresses, phosphorylated Tau aggregates and forms PHFs, which leads to the formation of neurofibrillary tangles (NFTs). In human glioma cells, PCTAIRE-3 induces cell cycle arrest and cell death. Length = 288

>gnl|CDD|173749 cd07855, STKc_ERK5, Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

 Score = 68.1 bits (167), Expect = 7e-14
 Identities = 26/56 (46%), Positives = 34/56 (60%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APELL     Y   IDMW+VGCI  E+L +    PG++ + QL  I   LG+PSE+
Sbjct: 179 APELLLSLPEYTTAIDMWSVGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSEE 234

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the MAP2K MEK5, which in turn is regulated by the MAP3Ks MEKK2 and MEKK3. Activated ERK5 phosphorylates its targets including myocyte enhancer factor 2 (MEF2), Sap1a, c-Myc, and RSK. It plays a role in EGF-induced cell proliferation during the G1/S phase transition. Studies on knockout mice revealed that ERK5 is essential for cardiovascular development and plays an important role in angiogenesis. It is also critical for neural differentiation and survival. The ERK5 pathway has been implicated in the pathogenesis of many diseases including cancer, cardiac hypertrophy, and atherosclerosis. Length = 334

>gnl|CDD|215690 pfam00069, Pkinase, Protein kinase domain

 Score = 65.7 bits (161), Expect = 2e-13
 Identities = 52/185 (28%), Positives = 74/185 (40%), Gaps = 48/185 (25%)

Query: 39  RRLDYANIIQ---------YLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYL 89
           RRL + NI++         +L L +E  +   L    DY+         +A+  +     
Sbjct: 53  RRLSHPNIVRLIDAFEDKDHLYLVMEYCEGGDLF---DYLSRGGPLSEDEAKKIAL---- 105

Query: 90  ENQQILEGLQA----------LKSSMPA--LLKK--------F----VGIGIGRHVCTLY 125
              QIL GL+           LK   P   LL +        F      +     + T  
Sbjct: 106 ---QILRGLEYLHSNGIIHRDLK---PENILLDENGVVKIADFGLAKKLLKSSSSLTTFV 159

Query: 126 CTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
            T    APE+L G   YG  +D+W++G I+ ELL   P   GE+ LDQL  I + LG P 
Sbjct: 160 GTPWYMAPEVLLGGNGYGPKVDVWSLGVILYELLTGKPPFSGENILDQLQLIRRILGPPL 219

Query: 184 EDTWP 188
           E   P
Sbjct: 220 EFDEP 224

Length = 260

>gnl|CDD|143363 cd07858, STKc_TEY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

 Score = 66.2 bits (162), Expect = 3e-13
 Identities = 27/56 (48%), Positives = 35/56 (62%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APELL     Y   ID+W+VGCI  ELL + P  PG+  + QL  I + LG+PSE+
Sbjct: 176 APELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEE 231

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. This subfamily represents the TEY subtype and is further subdivided into three groups (A, B, and C). Group A is represented by AtMPK3, AtMPK6, Nicotiana tabacum BTF4 (NtNTF4), among others. They are mostly involved in environmental and hormonal responses. AtMPK3 and AtMPK6 are also key regulators for stomatal development and patterning. Group B is represented by AtMPK4, AtMPK13, and NtNTF6, among others. They may be involved in both cell division and environmental stress response. AtMPK4 also participates in regulating innate immunity. Group C is represented by AtMPK1, AtMPK2, NtNTF3, Oryza sativa MAPK4 (OsMAPK4), among others. They may also be involved in stress responses. AtMPK1 and AtMPK2 are activated following mechanical injury and in the presence of stress chemicals such as jasmonic acid, hydrogen peroxide and abscisic acid. OsMAPK4 is also called OsMSRMK3 for Multiple Stress-Responsive MAPK3. Length = 337

>gnl|CDD|173754 cd07865, STKc_CDK9, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

 Score = 65.9 bits (161), Expect = 3e-13
 Identities = 26/59 (44%), Positives = 36/59 (61%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
            PELL G R YG  IDMW  GCI+ E+  ++P + G ++  QLT I Q  G+ + + WP
Sbjct: 191 PPELLLGERDYGPPIDMWGAGCIMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP 249

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multiple steps of gene expression including transcription elongation, mRNA synthesis, processing, export, and translation. It also plays a role in mediating cytokine induced transcription networks such as IL6-induced STAT3 signaling. In addition, the CDK9/cyclin T2a complex promotes muscle differentiation and enhances the function of some myogenic regulatory factors. Length = 310

>gnl|CDD|143356 cd07851, STKc_p38, Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

 Score = 65.8 bits (161), Expect = 4e-13
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI   +GTP E+
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLTGKTLFPGSDHIDQLKRIMNLVGTPDEE 238

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. p38 substrates include other protein kinases and factors that regulate transcription, nuclear export, mRNA stability and translation. p38 kinases are drug targets for the inflammatory diseases psoriasis, rheumatoid arthritis, and chronic pulmonary disease. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta, which show varying substrate specificity and expression patterns. p38alpha and p38beta are ubiquitously expressed, p38gamma is predominantly found in skeletal muscle, and p38delta is found in the heart, lung, testis, pancreas, and small intestine. Length = 343

>gnl|CDD|143367 cd07862, STKc_CDK6, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

 Score = 65.4 bits (159), Expect = 6e-13
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ WP
Sbjct: 177 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 234

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytoplasm. It is also present in the ruffling edge of spreading fibroblasts and may play a role in cell spreading. It binds to the p21 inhibitor without any effect on its own activity and it is overexpressed in squamous cell carcinomas and neuroblastomas. CDK6 has also been shown to inhibit cell differentiation in many cell types. Length = 290

>gnl|CDD|143368 cd07863, STKc_CDK4, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

 Score = 64.2 bits (156), Expect = 1e-12
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP
Sbjct: 175 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 232

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the nucleus. CDK4 also shows kinase activity towards Smad3, a signal transducer of transforming growth factor (TGF)-beta signaling which modulates transcription and plays a role in cell proliferation and apoptosis. CDK4 is inhibited by the p21 inhibitor and is specifically mutated in human melanoma. Length = 288

>gnl|CDD|143375 cd07870, STKc_PFTAIRE2, Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

 Score = 64.2 bits (156), Expect = 1e-12
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 1/59 (1%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD-LDQLTRIFQTLGTPSEDTWP 188
           P++L GA  Y   +D+W  GCI  E+L   P  PG SD  +QL +I+  LG P+EDTWP
Sbjct: 172 PDVLLGATDYSSALDIWGAGCIFIEMLQGQPAFPGVSDVFEQLEKIWTVLGVPTEDTWP 230

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recessive form of juvenile ALS. The function of PFTAIRE-2 is not yet known. Length = 291

>gnl|CDD|173735 cd07831, STKc_MOK, Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

 Score = 63.4 bits (155), Expect = 2e-12
 Identities = 25/56 (44%), Positives = 34/56 (60%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE L     YG  +D+WAVGC+  E+L   P  PG ++LDQ+ +I   LGTP  +
Sbjct: 166 APECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPDAE 221

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation. Length = 282

>gnl|CDD|173753 cd07864, STKc_CDK12, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

 Score = 61.7 bits (150), Expect = 1e-11
 Identities = 25/58 (43%), Positives = 31/58 (53%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PELL G   YG  ID+W+ GCI+ EL  K P      +L QL  I +  G+P    WP
Sbjct: 186 PELLLGEERYGPAIDVWSCGCILGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP 243

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely expressed in tissues. It interacts with cyclins L1 and L2, and plays roles in regulating transcription and alternative splicing. Length = 302

>gnl|CDD|143373 cd07868, STKc_CDK8, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

 Score = 61.2 bits (148), Expect = 2e-11
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 9/67 (13%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDL--------DQLTRIFQTLG 180
           APELL GAR Y   ID+WA+GCI  ELL   P F   + D+        DQL RIF  +G
Sbjct: 183 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 242

Query: 181 TPSEDTW 187
            P++  W
Sbjct: 243 FPADKDW 249

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA polymerase II (RNAP II)-dependent transcription. CDK8 phosphorylates cyclin H, a subunit of the general transcription factor TFIIH, which results in the inhibition of TFIIH-dependent phosphorylation of the C-terminal domain (CTD) of RNAP II, facilitating the inhibition of transcription. It has also been shown to promote transcription by a mechanism that is likely to involve RNAP II phosphorylation. CDK8 also functions as a stimulus-specific positive coregulator of p53 transcriptional responses. Length = 317

>gnl|CDD|173745 cd07848, STKc_CDKL5, Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

 Score = 60.8 bits (147), Expect = 2e-11
 Identities = 30/56 (53%), Positives = 38/56 (67%), Gaps = 2/56 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT-PSE 184
           +PELL GA  YG  +DMW+VGCI+ EL    P  PGES++DQL  I + LG  P+E
Sbjct: 169 SPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGPLPAE 223

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes cause a phenotype similar to Rett syndrome (RTT), a progressive neurodevelopmental disorder. These pathogenic mutations are located in the N-terminal portion of the protein within the kinase domain. Length = 287

>gnl|CDD|143372 cd07867, STKc_CDC2L6, Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

 Score = 60.9 bits (147), Expect = 3e-11
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 9/67 (13%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDL--------DQLTRIFQTLG 180
           APELL GAR Y   ID+WA+GCI  ELL   P F   + D+        DQL RIF  +G
Sbjct: 183 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMG 242

Query: 181 TPSEDTW 187
            P++  W
Sbjct: 243 FPADKDW 249

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as the caspase-processed CDK11(p46). CDK11(p110), CDK11(p58), and CDK11(p46)do not belong to this subfamily. CDC2L6 is an associated protein of Mediator, a multiprotein complex that provides a platform to connect transcriptional and chromatin regulators and cofactors, in order to activate and mediate RNA polymerase II transcription. CDC2L6 is localized mainly in the nucleus amd exerts an opposing effect to CDK8 in VP16-dependent transcriptional activation by being a negative regulator. Length = 317

>gnl|CDD|143385 cd07880, STKc_p38gamma_MAPK12, Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

 Score = 60.0 bits (145), Expect = 5e-11
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 26/152 (17%)

Query: 60  TTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQ------QILEGLQALKSS-------MP 106
            +L    D+ +V  F  T   +   H +  E++      Q+L+GL+ + ++        P
Sbjct: 87  LSLDRFHDFYLVMPFMGTDLGKLMKHEKLSEDRIQFLVYQMLKGLKYIHAAGIIHRDLKP 146

Query: 107 ALLK-------KFVGIGIGRH----VCTLYCTR--GAPELLFGARMYGVGIDMWAVGCII 153
             L        K +  G+ R     +     TR   APE++     Y   +D+W+VGCI+
Sbjct: 147 GNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWYRAPEVILNWMHYTQTVDIWSVGCIM 206

Query: 154 CELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
            E+L   P   G   LDQL  I +  GTPS++
Sbjct: 207 AEMLTGKPLFKGHDHLDQLMEIMKVTGTPSKE 238

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12, is predominantly expressed in skeletal muscle. Unlike p38alpha and p38beta, p38gamma is insensitive to pyridinylimidazoles. It displays an antagonizing function compared to p38alpha. p38gamma inhibits, while p38alpha stimulates, c-Jun phosphorylation and AP-1 mediated transcription. p38gamma also plays a role in the signaling between Ras and the estrogen receptor and has been implicated to increase cell invasion and breast cancer progression. In Xenopus, p38gamma is critical in the meiotic maturation of oocytes. Length = 343

>gnl|CDD|143361 cd07856, STKc_Sty1_Hog1, Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

 Score = 59.5 bits (144), Expect = 8e-11
 Identities = 22/56 (39%), Positives = 34/56 (60%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++   + Y V +D+W+ GCI  E+L   P  PG+  ++Q + I   LGTP +D
Sbjct: 173 APEIMLTWQKYDVEVDIWSAGCIFAEMLEGKPLFPGKDHVNQFSIITDLLGTPPDD 228

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and UV radiation. Sty1 is regulated by the MAP2K Wis1, which is activated by the MAP3Ks Wis4 and Win1, which receive signals of the stress condition from membrane-spanning histidine kinases Mak1-3. Activated Sty1 stabilizes the Atf1 transcription factor and induces transcription of Atf1-dependent genes of the core environmetal stress response (CESR). Hog1 is the key element in the high osmolarity glycerol (HOG) pathway and is activated upon hyperosmotic stress. Activated Hog1 accumulates in the nucleus and regulates stress-induced transcription. The HOG pathway is mediated by two transmembrane osmosensors, Sln1 and Sho1. Length = 328

>gnl|CDD|173748 cd07853, STKc_NLK, Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

 Score = 59.0 bits (143), Expect = 1e-10
 Identities = 25/54 (46%), Positives = 33/54 (61%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           APE+L G+R Y   +D+W+VGCI  ELL +      +S + QL  I   LGTPS
Sbjct: 172 APEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPS 225

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription factors from the TCF/LEF family, inhibiting their ability to activate the transcription of target genes. In prostate cancer cells, NLK is involved in regulating androgen receptor-mediated transcription and its expression is altered during cancer progression. Length = 372

>gnl|CDD|143383 cd07878, STKc_p38beta_MAPK11, Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

 Score = 58.1 bits (140), Expect = 2e-10
 Identities = 24/56 (42%), Positives = 34/56 (60%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS +
Sbjct: 183 APEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSPE 238

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is widely expressed in tissues and shows more similarity with p38alpha than with the other isoforms. Both are sensitive to pyridinylimidazoles and share some common substrates such as MAPK activated protein kinase 2 (MK2) and the transcription factors ATF2, c-Fos and, ELK-1. p38beta is involved in regulating the activation of the cyclooxygenase-2 promoter and the expression of TGFbeta-induced alpha-smooth muscle cell actin. Length = 343

>gnl|CDD|143359 cd07854, STKc_MAPK4_6, Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

 Score = 57.1 bits (138), Expect = 5e-10
 Identities = 52/193 (26%), Positives = 75/193 (38%), Gaps = 48/193 (24%)

Query: 30  QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSD----------YIVVKIFTKTTK 79
            A  E K  RRLD+ NI++      E L P+    + D          YIV + + +T  
Sbjct: 48  HALREIKIIRRLDHDNIVKVY----EVLGPSGSDLTEDVGSLTELNSVYIVQE-YMETDL 102

Query: 80  ARFYSHLRYLENQ------QILEGLQALKSS-------MPA--------LLKKFVGIGIG 118
           A         E        Q+L GL+ + S+        PA        L+ K    G+ 
Sbjct: 103 ANVLEQGPLSEEHARLFMYQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLA 162

Query: 119 RHVCTLYCTRG------------APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE 166
           R V   Y  +G            +P LL     Y   IDMWA GCI  E+L   P   G 
Sbjct: 163 RIVDPHYSHKGYLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGA 222

Query: 167 SDLDQLTRIFQTL 179
            +L+Q+  I +++
Sbjct: 223 HELEQMQLILESV 235

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progression in certain conditions. It may also play a role in glucose-induced insulin secretion. MAPK6 and MAPK4 cooperate to regulate the activity of MAPK-activated protein kinase 5 (MK5), leading to its relocation to the cytoplasm and exclusion from the nucleus. The MAPK6/MK5 and MAPK4/MK5 pathways may play critical roles in embryonic and post-natal development. Length = 342

>gnl|CDD|214567 smart00220, S_TKc, Serine/Threonine protein kinases, catalytic domain

 Score = 56.0 bits (136), Expect = 8e-10
 Identities = 24/60 (40%), Positives = 34/60 (56%), Gaps = 6/60 (10%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + YG  +D+W++G I+ ELL  K PF       DQL  +F+ +G P     P
Sbjct: 164 APEVLLG-KGYGKAVDIWSLGVILYELLTGKPPF----PGDDQLLELFKKIGKPKPPFPP 218

Phosphotransferases. Serine or threonine-specific kinase subfamily. Length = 254

>gnl|CDD|143382 cd07877, STKc_p38alpha_MAPK14, Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

 Score = 55.8 bits (134), Expect = 1e-09
 Identities = 40/118 (33%), Positives = 58/118 (49%), Gaps = 21/118 (17%)

Query: 85  HLRYLENQQILEGLQALKSS-------MPALLK-------KFVGIGIGRHV---CTLY-C 126
           H+++L   QIL GL+ + S+        P+ L        K +  G+ RH     T Y  
Sbjct: 121 HVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVA 179

Query: 127 TR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           TR   APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 180 TRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 237

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14, is expressed in most tissues and is the major isoform involved in the immune and inflammatory response. It is the central p38 MAPK involved in myogenesis. It plays a role in regulating cell cycle check-point transition and promoting cell differentiation. p38alpha also regulates cell proliferation and death through crosstalk with the JNK pathway. Its substrates include MAPK activated protein kinase 2 (MK2), MK5, and the transcription factors ATF2 and Mitf. Length = 345

>gnl|CDD|143364 cd07859, STKc_TDY_MAPK_plant, Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

 Score = 54.8 bits (132), Expect = 3e-09
 Identities = 26/59 (44%), Positives = 36/59 (61%), Gaps = 3/59 (5%)

Query: 130 APELL--FGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APEL   F ++ Y   ID+W++GCI  E+L   P  PG++ + QL  I   LGTPS +T
Sbjct: 174 APELCGSFFSK-YTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSPET 231

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activation loop, TEY and TDY. Arabidopsis thaliana contains more TEY-type MAPKs than TDY-type, whereas the reverse is true for Oryza sativa. This subfamily represents the TDY subtype and is composed of Group D plant MAPKs including Arabidopsis thaliana MPK18 (AtMPK18), Oryza sativa Blast- and Wound-induced MAPK1 (OsBWMK1), OsWJUMK1 (Wound- and JA-Uninducible MAPK1), Zea mays MPK6, and the Medicago sativa TDY1 gene product. OsBWMK1 enhances resistance to pathogenic infections. It mediates stress-activated defense responses by activating a transcription factor that affects the expression of stress-related genes. AtMPK18 is involved in microtubule-related functions. Length = 338

>gnl|CDD|173746 cd07850, STKc_JNK, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

 Score = 54.3 bits (131), Expect = 4e-09
 Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 3/57 (5%)

Query: 130 APELLFGARM-YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++ G  M Y   +D+W+VGCI+ E++      PG   +DQ  +I + LGTPS++
Sbjct: 185 APEVILG--MGYKENVDIWSVGCIMGEMIRGTVLFPGTDHIDQWNKIIEQLGTPSDE 239

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3) that are alternatively spliced to produce at least 10 isoforms. JNKs are specifically activated by the MAPK kinases MKK4 and MKK7, which are in turn activated by upstream MAPK kinase kinases as a result of different stimuli including stresses such as ultraviolet (UV) irradiation, hyperosmolarity, heat shock, or cytokines. JNKs activate a large number of different substrates based on specific stimulus, cell type, and cellular condition, and may be implicated in seemingly contradictory functions. Length = 353

>gnl|CDD|143381 cd07876, STKc_JNK2, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

 Score = 49.6 bits (118), Expect = 2e-07
 Identities = 28/81 (34%), Positives = 43/81 (53%), Gaps = 9/81 (11%)

Query: 111 KFVGIGIGRHVCTLY------CTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPF 162
           K +  G+ R  CT +       TR   APE++ G   Y   +D+W+VGCI+ EL+  +  
Sbjct: 163 KILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVI 221

Query: 163 LPGESDLDQLTRIFQTLGTPS 183
             G   +DQ  ++ + LGTPS
Sbjct: 222 FQGTDHIDQWNKVIEQLGTPS 242

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK2 is specifically translocated to the mitochondria during dopaminergic cell death. Specific substrates include the microtubule-associated proteins DCX and Tau, as well as TIF-IA which is involved in ribosomal RNA synthesis regulation. Mice deficient in Jnk2 show protection against arthritis, type 1 diabetes, atherosclerosis, abdominal aortic aneurysm, cardiac cell death, TNF-induced liver damage, and tumor growth, indicating that JNK2 may play roles in the pathogenesis of these diseases. Length = 359

>gnl|CDD|143384 cd07879, STKc_p38delta_MAPK13, Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

 Score = 49.1 bits (117), Expect = 2e-07
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 6/81 (7%)

Query: 111 KFVGIGIGRHV---CTLYC-TR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 164
           K +  G+ RH     T Y  TR   APE++     Y   +D+W+VGCI+ E+L       
Sbjct: 157 KILDFGLARHADAEMTGYVVTRWYRAPEVILNWMHYNQTVDIWSVGCIMAEMLTGKTLFK 216

Query: 165 GESDLDQLTRIFQTLGTPSED 185
           G+  LDQLT+I +  G P  +
Sbjct: 217 GKDYLDQLTQILKVTGVPGPE 237

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13, is found in skeletal muscle, heart, lung, testis, pancreas, and small intestine. It regulates microtubule function by phosphorylating Tau. It activates the c-jun promoter and plays a role in G2 cell cycle arrest. It also controls the degration of c-Myb, which is associated with myeloid leukemia and poor prognosis in colorectal cancer. p38delta is the main isoform involved in regulating the differentiation and apoptosis of keratinocytes. Length = 342

>gnl|CDD|143380 cd07875, STKc_JNK1, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

 Score = 48.1 bits (114), Expect = 5e-07
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jnk1 or Jnk2) could survive but disruption of both genes resulted in lethality. However, recent studies have shown that JNK1 and JNK2 perform distinct functions through specific binding partners and substrates. JNK1 specifically binds with JAMP (JNK1-associated membrane protein), which regulates the duration of JNK1 activity in response to stimuli. Specific JNK1 substrates include Itch and SG10, which are implicated in Th2 responses and airway inflammation, and microtubule dynamics and axodendritic length, respectively. Mice deficient in Jnk1 are protected against arthritis, obesity, type 2 diabetes, cardiac cell death, and non-alcoholic liver disease, suggesting that JNK1 may play roles in the pathogenesis of these diseases. Length = 364

>gnl|CDD|143379 cd07874, STKc_JNK3, Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

 Score = 47.0 bits (111), Expect = 1e-06
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, stroke, sciatic axotomy neural death, and neuronal death due to NGF deprivation, oxidative stress, or exposure to beta-amyloid peptide. This suggests that JNK3 may play roles in the pathogenesis of these diseases. Length = 355

>gnl|CDD|132960 cd06629, STKc_MAPKKK_Bck1_like, Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

 Score = 40.2 bits (94), Expect = 3e-04
 Identities = 46/172 (26%), Positives = 72/172 (41%), Gaps = 41/172 (23%)

Query: 41  LDYANIIQYLSLPVETLQPTTLSTSSDYI----VVKIFTKTTKARFYSHLRYLENQQILE 96
           LD+ NI+QYL    ET     LS   +Y+    +          RF   L     +Q+LE
Sbjct: 65  LDHLNIVQYLGF--ET-TEEYLSIFLEYVPGGSIGSCLRT--YGRFEEQLVRFFTEQVLE 119

Query: 97  GLQALKSS------MPA--LLKKFVGI------GIGRHVCTLYCT------RG-----AP 131
           GL  L S       + A  LL    GI      GI +    +Y        +G     AP
Sbjct: 120 GLAYLHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFWMAP 179

Query: 132 ELLFGARM-YGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
           E++      Y   +D+W++GC++ E+   + P+    SD + +  +F+ LG 
Sbjct: 180 EVIHSYSQGYSAKVDIWSLGCVVLEMFAGRRPW----SDEEAIAAMFK-LGN 226

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell integrity MAPK pathway, which is activated by stresses and aggressions to the cell wall. The MAPKKK Bck1, MAPKKs Mkk1 and Mkk2, and the MAPK Slt2 make up the cascade that is important in the maintenance of cell wall homeostasis. Fission yeast Mkh1 is involved in MAPK cascades regulating cell morphology, cell wall integrity, salt resistance, and filamentous growth in response to stress. Length = 272

>gnl|CDD|223589 COG0515, SPS1, Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

 Score = 39.3 bits (90), Expect = 6e-04
 Identities = 22/69 (31%), Positives = 28/69 (40%), Gaps = 7/69 (10%)

Query: 122 CTLYCTRG--APELLFG--ARMYGVGIDMWAVGCIICELLLKAP---FLPGESDLDQLTR 174
            T   T G  APE+L G          D+W++G  + ELL   P        S   Q  +
Sbjct: 166 STSVGTPGYMAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKNSSATSQTLK 225

Query: 175 IFQTLGTPS 183
           I   L TPS
Sbjct: 226 IILELPTPS 234

Length = 384

>gnl|CDD|173502 PTZ00266, PTZ00266, NIMA-related protein kinase; Provisional

 Score = 37.8 bits (87), Expect = 0.002
 Identities = 24/56 (42%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 109 LKKFVGIGIGRHVCTLYCTRGAPELLFG-ARMYGVGIDMWAVGCIICELLL-KAPF 162
           L K +GI    H C       +PELL    + Y    DMWA+GCII EL   K PF
Sbjct: 188 LSKNIGIESMAHSCVGTPYYWSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPF 243

Length = 1021

>gnl|CDD|173623 cd00180, PKc, Catalytic domain of Protein Kinases

 Score = 36.8 bits (86), Expect = 0.002
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL 156
           V T      APE+L G   Y    D+W++G I+ EL
Sbjct: 154 VGTPAYM--APEVLLGKGYYSEKSDIWSLGVILYEL 187

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which one kinase activates a second kinase, which in turn, may act on other kinases; this sequential action transmits a signal from the cell surface to target proteins, which results in cellular responses. The PK family is one of the largest known protein families with more than 100 homologous yeast enzymes and 550 human proteins. A fraction of PK family members are pseudokinases that lack crucial residues for catalytic activity. The mutiplicity of kinases allows for specific regulation according to substrate, tissue distribution, and cellular localization. PKs regulate many cellular processes including proliferation, division, differentiation, motility, survival, metabolism, cell-cycle progression, cytoskeletal rearrangement, immunity, and neuronal functions. Many kinases are implicated in the development of various human diseases including different types of cancer. Length = 215

>gnl|CDD|173660 cd05123, STKc_AGC, Catalytic domain of AGC family Protein Serine/Threonine Kinases

 Score = 36.7 bits (86), Expect = 0.003
 Identities = 15/34 (44%), Positives = 22/34 (64%), Gaps = 2/34 (5%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPF 162
           APE+L G   YG  +D W++G ++ E+L  K PF
Sbjct: 161 APEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPF 193

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the turn motif. Phosphorylation at the A-loop is required of most AGC kinases, which results in a disorder-to-order transition of the A-loop. The ordered conformation results in the access of substrates and ATP to the active site. A subset of AGC kinases with C-terminal extensions containing the HM also requires phosphorylation at this site. Phosphorylation at the HM allows the C-terminal extension to form an ordered structure that packs into the hydrophobic pocket of the catalytic domain, which then reconfigures the kinase into an active bi-lobed state. In addition, growth factor-activated AGC kinases such as PKB, p70S6K, RSK, MSK, PKC, and SGK, require phosphorylation at the turn motif (also called tail or zipper site), located N-terminal to the HM at the C-terminal extension. AGC kinases regulate many cellular processes including division, growth, survival, metabolism, motility, and differentiation. Many are implicated in the development of various human diseases. Length = 250

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	188
KOG0600|consensus	560		100.0
KOG0595|consensus	429		100.0
KOG0659|consensus	318		100.0
KOG0663|consensus	419		100.0
KOG0197|consensus	468		100.0
KOG0598|consensus	357		100.0
KOG0591|consensus	375		100.0
KOG0661|consensus	538		100.0
KOG0575|consensus	592		100.0
KOG0615|consensus	475		100.0
KOG0593|consensus	396		100.0
KOG0594|consensus	323		100.0
KOG0660|consensus	359		100.0
KOG1026|consensus	774		100.0
KOG0616|consensus	355		100.0
KOG0658|consensus	364		100.0
KOG0581|consensus	364		100.0
KOG0597|consensus	808		100.0
KOG0192|consensus	362		99.98
KOG0694|consensus	694		99.98
KOG0605|consensus	550		99.97
KOG0033|consensus	355		99.97
KOG0667|consensus	586		99.97
KOG0662|consensus	292		99.97
KOG0610|consensus	459		99.97
KOG0583|consensus	370		99.97
cd07871	288	STKc_PCTAIRE3 Catalytic domain of the Serine/Threo	99.96
KOG0589|consensus	426		99.96
KOG4721|consensus	904		99.96
KOG0611|consensus	668		99.96
KOG0592|consensus	604		99.96
KOG0574|consensus	502		99.96
KOG0582|consensus	516		99.96
KOG1095|consensus	1025		99.96
KOG0578|consensus	550		99.96
KOG0577|consensus	948		99.96
KOG0196|consensus	996		99.96
cd07869	303	STKc_PFTAIRE1 Catalytic domain of the Serine/Threo	99.96
KOG0198|consensus	313		99.96
KOG0194|consensus	474		99.96
cd05628	363	STKc_NDR1 Catalytic domain of the Protein Serine/T	99.96
KOG0579|consensus	1187		99.96
KOG0666|consensus	438		99.96
KOG0588|consensus	786		99.96
PTZ00036	440	glycogen synthase kinase; Provisional	99.96
cd05629	377	STKc_NDR_like_fungal Catalytic domain of Fungal Nu	99.96
cd05625	382	STKc_LATS1 Catalytic domain of the Protein Serine/	99.96
KOG0585|consensus	576		99.96
KOG0201|consensus	467		99.96
cd05626	381	STKc_LATS2 Catalytic domain of the Protein Serine/	99.96
KOG4279|consensus	1226		99.96
KOG0032|consensus	382		99.95
cd05571	323	STKc_PKB Catalytic domain of the Protein Serine/Th	99.95
KOG0580|consensus	281		99.95
cd05598	376	STKc_LATS Catalytic domain of the Protein Serine/T	99.95
cd05585	312	STKc_YPK1_like Catalytic domain of Yeast Protein K	99.95
KOG0669|consensus	376		99.95
cd07859	338	STKc_TDY_MAPK_plant Catalytic domain of the Serine	99.95
cd07872	309	STKc_PCTAIRE2 Catalytic domain of the Serine/Threo	99.95
PTZ00426	340	cAMP-dependent protein kinase catalytic subunit; P	99.95
PTZ00263	329	protein kinase A catalytic subunit; Provisional	99.95
cd05612	291	STKc_PRKX_like Catalytic domain of PRKX-like Prote	99.95
cd07862	290	STKc_CDK6 Catalytic domain of the Serine/Threonine	99.95
cd05599	364	STKc_NDR_like Catalytic domain of Nuclear Dbf2-Rel	99.95
cd07848	287	STKc_CDKL5 Catalytic domain of the Serine/Threonin	99.95
KOG4250|consensus	732		99.95
cd05595	323	STKc_PKB_beta Catalytic domain of the Protein Seri	99.95
PTZ00267	478	NIMA-related protein kinase; Provisional	99.95
KOG4278|consensus	1157		99.95
cd05600	333	STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p-	99.95
cd07868	317	STKc_CDK8 Catalytic domain of the Serine/Threonine	99.95
PHA02988	283	hypothetical protein; Provisional	99.95
cd05584	323	STKc_p70S6K Catalytic domain of the Protein Serine	99.95
cd05593	328	STKc_PKB_gamma Catalytic domain of the Protein Ser	99.95
KOG4257|consensus	974		99.95
cd05631	285	STKc_GRK4 Catalytic domain of the Protein Serine/T	99.95
cd05621	370	STKc_ROCK2 Catalytic domain of the Protein Serine/	99.95
cd05627	360	STKc_NDR2 Catalytic domain of the Protein Serine/T	99.95
cd07853	372	STKc_NLK Catalytic domain of the Serine/Threonine	99.95
cd07875	364	STKc_JNK1 Catalytic domain of the Serine/Threonine	99.95
cd07876	359	STKc_JNK2 Catalytic domain of the Serine/Threonine	99.95
cd05622	371	STKc_ROCK1 Catalytic domain of the Protein Serine/	99.95
cd07873	301	STKc_PCTAIRE1 Catalytic domain of the Serine/Threo	99.94
cd05064	266	PTKc_EphR_A10 Catalytic domain of the Protein Tyro	99.94
cd05592	316	STKc_nPKC_theta_delta Catalytic domain of the Prot	99.94
cd05596	370	STKc_ROCK Catalytic domain of the Protein Serine/T	99.94
KOG4717|consensus	864		99.94
cd05590	320	STKc_nPKC_eta Catalytic domain of the Protein Seri	99.94
cd07874	355	STKc_JNK3 Catalytic domain of the Serine/Threonine	99.94
cd05594	325	STKc_PKB_alpha Catalytic domain of the Protein Ser	99.94
cd05589	324	STKc_PKN Catalytic domain of the Protein Serine/Th	99.94
KOG0599|consensus	411		99.94
cd05591	321	STKc_nPKC_epsilon Catalytic domain of the Protein	99.94
cd07867	317	STKc_CDC2L6 Catalytic domain of Serine/Threonine K	99.94
cd05102	338	PTKc_VEGFR3 Catalytic domain of the Protein Tyrosi	99.94
cd07863	288	STKc_CDK4 Catalytic domain of the Serine/Threonine	99.94
cd05603	321	STKc_SGK2 Catalytic domain of the Protein Serine/T	99.94
cd05570	318	STKc_PKC Catalytic domain of the Protein Serine/Th	99.94
cd05605	285	STKc_GRK4_like Catalytic domain of G protein-coupl	99.94
cd05602	325	STKc_SGK1 Catalytic domain of the Protein Serine/T	99.94
cd07878	343	STKc_p38beta_MAPK11 Catalytic domain of the Serine	99.94
cd05588	329	STKc_aPKC Catalytic domain of the Protein Serine/T	99.94
PHA03212	391	serine/threonine kinase US3; Provisional	99.94
cd05619	316	STKc_nPKC_theta Catalytic domain of the Protein Se	99.94
cd05608	280	STKc_GRK1 Catalytic domain of the Protein Serine/T	99.94
cd06649	331	PKc_MEK2 Catalytic domain of the dual-specificity	99.94
KOG0614|consensus	732		99.94
cd05616	323	STKc_cPKC_beta Catalytic domain of the Protein Ser	99.94
PF07714	259	Pkinase_Tyr: Protein tyrosine kinase Protein kinas	99.94
cd05582	318	STKc_RSK_N N-terminal catalytic domain of the Prot	99.94
cd05587	324	STKc_cPKC Catalytic domain of the Protein Serine/T	99.94
cd05084	252	PTKc_Fes Catalytic domain of the Protein Tyrosine	99.94
cd05604	325	STKc_SGK3 Catalytic domain of the Protein Serine/T	99.94
PTZ00283	496	serine/threonine protein kinase; Provisional	99.94
cd05620	316	STKc_nPKC_delta Catalytic domain of the Protein Se	99.94
cd05048	283	PTKc_Ror Catalytic Domain of the Protein Tyrosine	99.94
cd05575	323	STKc_SGK Catalytic domain of the Protein Serine/Th	99.94
cd05617	327	STKc_aPKC_zeta Catalytic domain of the Protein Ser	99.94
cd05597	331	STKc_DMPK_like Catalytic domain of Myotonic Dystro	99.94
cd07861	285	STKc_CDK1_euk Catalytic domain of the Serine/Threo	99.93
KOG0607|consensus	463		99.93
cd05114	256	PTKc_Tec_Rlk Catalytic domain of the Protein Tyros	99.93
cd05573	350	STKc_ROCK_NDR_like Catalytic domain of ROCK- and N	99.93
cd05615	323	STKc_cPKC_alpha Catalytic domain of the Protein Se	99.93
cd05116	257	PTKc_Syk Catalytic domain of the Protein Tyrosine	99.93
cd05618	329	STKc_aPKC_iota Catalytic domain of the Protein Ser	99.93
cd05624	331	STKc_MRCK_beta Catalytic domain of the Protein Ser	99.93
cd05115	257	PTKc_Zap-70 Catalytic domain of the Protein Tyrosi	99.93
cd05049	280	PTKc_Trk Catalytic domain of the Protein Tyrosine	99.93
cd05090	283	PTKc_Ror1 Catalytic domain of the Protein Tyrosine	99.93
cd07844	291	STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like	99.93
KOG4645|consensus	1509		99.93
KOG4236|consensus	888		99.93
PLN00034	353	mitogen-activated protein kinase kinase; Provision	99.93
cd05607	277	STKc_GRK7 Catalytic domain of the Protein Serine/T	99.93
cd05601	330	STKc_CRIK Catalytic domain of the Protein Serine/T	99.93
cd07832	286	STKc_CCRK Catalytic domain of the Serine/Threonine	99.93
cd06650	333	PKc_MEK1 Catalytic domain of the dual-specificity	99.93
cd05052	263	PTKc_Abl Catalytic domain of the Protein Tyrosine	99.93
KOG0604|consensus	400		99.93
cd05614	332	STKc_MSK2_N N-terminal catalytic domain of the Pro	99.93
cd05072	261	PTKc_Lyn Catalytic domain of the Protein Tyrosine	99.93
cd05623	332	STKc_MRCK_alpha Catalytic domain of the Protein Se	99.93
cd05106	374	PTKc_CSF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05093	288	PTKc_TrkB Catalytic domain of the Protein Tyrosine	99.93
cd05096	304	PTKc_DDR1 Catalytic domain of the Protein Tyrosine	99.93
KOG0690|consensus	516		99.93
cd07839	284	STKc_CDK5 Catalytic domain of the Serine/Threonine	99.93
cd05062	277	PTKc_IGF-1R Catalytic domain of the Protein Tyrosi	99.93
cd05148	261	PTKc_Srm_Brk Catalytic domain of the Protein Tyros	99.93
PTZ00024	335	cyclin-dependent protein kinase; Provisional	99.93
PLN00009	294	cyclin-dependent kinase A; Provisional	99.93
cd05586	330	STKc_Sck1_like Catalytic domain of Suppressor of l	99.93
cd05632	285	STKc_GRK5 Catalytic domain of the Protein Serine/T	99.93
PTZ00266	1021	NIMA-related protein kinase; Provisional	99.93
cd08529	256	STKc_FA2-like Catalytic domain of the Protein Seri	99.93
KOG0587|consensus	953		99.93
KOG1187|consensus	361		99.93
cd05042	269	PTKc_Aatyk Catalytic domain of the Protein Tyrosin	99.93
cd06619	279	PKc_MKK5 Catalytic domain of the dual-specificity	99.93
cd05108	316	PTKc_EGFR Catalytic domain of the Protein Tyrosine	99.93
cd06611	280	STKc_SLK_like Catalytic domain of Ste20-like kinas	99.93
cd07860	284	STKc_CDK2_3 Catalytic domain of the Serine/Threoni	99.93
cd05094	291	PTKc_TrkC Catalytic domain of the Protein Tyrosine	99.93
KOG1989|consensus	738		99.93
cd05104	375	PTKc_Kit Catalytic domain of the Protein Tyrosine	99.93
cd05113	256	PTKc_Btk_Bmx Catalytic domain of the Protein Tyros	99.93
PRK13184	932	pknD serine/threonine-protein kinase; Reviewed	99.93
cd05092	280	PTKc_TrkA Catalytic domain of the Protein Tyrosine	99.93
cd05068	261	PTKc_Frk_like Catalytic domain of Fyn-related kina	99.93
KOG0199|consensus	1039		99.92
cd05105	400	PTKc_PDGFR_alpha Catalytic domain of the Protein T	99.92
cd07865	310	STKc_CDK9 Catalytic domain of the Serine/Threonine	99.92
cd05091	283	PTKc_Ror2 Catalytic domain of the Protein Tyrosine	99.92
cd05085	250	PTKc_Fer Catalytic domain of the Protein Tyrosine	99.92
cd07841	298	STKc_CDK7 Catalytic domain of the Serine/Threonine	99.92
cd08219	255	STKc_Nek3 Catalytic domain of the Protein Serine/T	99.92
cd06643	282	STKc_SLK Catalytic domain of the Protein Serine/Th	99.92
KOG0193|consensus	678		99.92
KOG0664|consensus	449		99.92
cd05070	260	PTKc_Fyn_Yrk Catalytic domain of the Protein Tyros	99.92
cd05089	297	PTKc_Tie1 Catalytic domain of the Protein Tyrosine	99.92
cd05065	269	PTKc_EphR_B Catalytic domain of the Protein Tyrosi	99.92
cd05077	262	PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of th	99.92
cd05076	274	PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of th	99.92
cd05059	256	PTKc_Tec_like Catalytic domain of Tec-like Protein	99.92
cd05071	262	PTKc_Src Catalytic domain of the Protein Tyrosine	99.92
cd05063	268	PTKc_EphR_A2 Catalytic domain of the Protein Tyros	99.92
cd07845	309	STKc_CDK10 Catalytic domain of the Serine/Threonin	99.92
KOG0668|consensus	338		99.92
cd05045	290	PTKc_RET Catalytic domain of the Protein Tyrosine	99.92
cd07843	293	STKc_CDC2L1 Catalytic domain of the Serine/Threoni	99.92
cd07870	291	STKc_PFTAIRE2 Catalytic domain of the Serine/Threo	99.92
cd05032	277	PTKc_InsR_like Catalytic domain of Insulin Recepto	99.92
cd05033	266	PTKc_EphR Catalytic domain of Ephrin Receptor Prot	99.92
cd06644	292	STKc_STK10_LOK Catalytic domain of the Protein Ser	99.92
cd05036	277	PTKc_ALK_LTK Catalytic domain of the Protein Tyros	99.92
cd05075	272	PTKc_Axl Catalytic domain of the Protein Tyrosine	99.92
cd05066	267	PTKc_EphR_A Catalytic domain of the Protein Tyrosi	99.92
cd05069	260	PTKc_Yes Catalytic domain of the Protein Tyrosine	99.92
cd07866	311	STKc_BUR1 Catalytic domain of the Serine/Threonine	99.92
cd05058	262	PTKc_Met_Ron Catalytic domain of the Protein Tyros	99.92
cd07864	302	STKc_CDK12 Catalytic domain of the Serine/Threonin	99.92
cd05034	261	PTKc_Src_like Catalytic domain of Src kinase-like	99.92
cd06645	267	STKc_MAP4K3 Catalytic domain of the Protein Serine	99.92
cd08221	256	STKc_Nek9 Catalytic domain of the Protein Serine/T	99.92
cd05111	279	PTK_HER3 Pseudokinase domain of the Protein Tyrosi	99.92
cd05609	305	STKc_MAST Catalytic domain of the Protein Serine/T	99.92
cd07850	353	STKc_JNK Catalytic domain of the Serine/Threonine	99.92
cd05087	269	PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein	99.92
cd05083	254	PTKc_Chk Catalytic domain of the Protein Tyrosine	99.92
cd05041	251	PTKc_Fes_like Catalytic domain of Fes-like Protein	99.92
cd05080	283	PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the	99.92
PTZ00284	467	protein kinase; Provisional	99.92
cd05067	260	PTKc_Lck_Blk Catalytic domain of the Protein Tyros	99.92
cd05088	303	PTKc_Tie2 Catalytic domain of the Protein Tyrosine	99.92
cd06628	267	STKc_MAPKKK_Byr2_like Catalytic domain of fungal B	99.92
cd08228	267	STKc_Nek6 Catalytic domain of the Protein Serine/T	99.92
cd05056	270	PTKc_FAK Catalytic domain of the Protein Tyrosine	99.92
cd06631	265	STKc_YSK4 Catalytic domain of the Protein Serine/T	99.92
cd06654	296	STKc_PAK1 Catalytic domain of the Protein Serine/T	99.92
cd05047	270	PTKc_Tie Catalytic domain of Tie Protein Tyrosine	99.92
KOG0586|consensus	596		99.92
cd06613	262	STKc_MAP4K3_like Catalytic domain of Mitogen-activ	99.92
cd06640	277	STKc_MST4 Catalytic domain of the Protein Serine/T	99.92
cd05044	269	PTKc_c-ros Catalytic domain of the Protein Tyrosin	99.92
cd06655	296	STKc_PAK2 Catalytic domain of the Protein Serine/T	99.92
cd05035	273	PTKc_Axl_like Catalytic Domain of Axl-like Protein	99.92
cd06658	292	STKc_PAK5 Catalytic domain of the Protein Serine/T	99.92
cd06642	277	STKc_STK25-YSK1 Catalytic domain of the Protein Se	99.92
PHA03207	392	serine/threonine kinase US3; Provisional	99.92
cd05060	257	PTKc_Syk_like Catalytic domain of Spleen Tyrosine	99.92
cd05039	256	PTKc_Csk_like Catalytic domain of C-terminal Src k	99.92
cd05082	256	PTKc_Csk Catalytic domain of the Protein Tyrosine	99.92
cd07847	286	STKc_CDKL1_4 Catalytic domain of the Serine/Threon	99.92
cd07849	336	STKc_ERK1_2_like Catalytic domain of Extracellular	99.92
cd08227	327	PK_STRAD_alpha Pseudokinase domain of STE20-relate	99.92
cd06615	308	PKc_MEK Catalytic domain of the dual-specificity P	99.92
cd06625	263	STKc_MEKK3_like Catalytic domain of MAP/ERK kinase	99.92
cd07836	284	STKc_Pho85 Catalytic domain of the Serine/Threonin	99.92
cd05580	290	STKc_PKA Catalytic domain of the Protein Serine/Th	99.92
KOG0596|consensus	677		99.92
cd06659	297	STKc_PAK6 Catalytic domain of the Protein Serine/T	99.92
cd07840	287	STKc_CDK9_like Catalytic domain of Cyclin-Dependen	99.92
cd05078	258	PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain	99.91
KOG0584|consensus	632		99.91
cd05061	288	PTKc_InsR Catalytic domain of the Protein Tyrosine	99.91
cd07835	283	STKc_CDK1_like Catalytic domain of Cyclin-Dependen	99.91
cd05630	285	STKc_GRK6 Catalytic domain of the Protein Serine/T	99.91
KOG0984|consensus	282		99.91
KOG1094|consensus	807		99.91
cd05086	268	PTKc_Aatyk2 Catalytic domain of the Protein Tyrosi	99.91
cd06612	256	STKc_MST1_2 Catalytic domain of the Protein Serine	99.91
cd06646	267	STKc_MAP4K5 Catalytic domain of the Protein Serine	99.91
cd05099	314	PTKc_FGFR4 Catalytic domain of the Protein Tyrosin	99.91
cd05081	284	PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of	99.91
cd05101	304	PTKc_FGFR2 Catalytic domain of the Protein Tyrosin	99.91
cd05050	288	PTKc_Musk Catalytic domain of the Protein Tyrosine	99.91
cd06609	274	STKc_MST3_like Catalytic domain of Mammalian Ste20	99.91
cd05043	280	PTK_Ryk Pseudokinase domain of Ryk (Receptor relat	99.91
cd07846	286	STKc_CDKL2_3 Catalytic domain of the Serine/Threon	99.91
KOG0671|consensus	415		99.91
cd06652	265	STKc_MEKK2 Catalytic domain of the Protein Serine/	99.91
cd07833	288	STKc_CDKL Catalytic domain of Cyclin-Dependent pro	99.91
cd06624	268	STKc_ASK Catalytic domain of the Protein Serine/Th	99.91
cd08220	256	STKc_Nek8 Catalytic domain of the Protein Serine/T	99.91
cd07842	316	STKc_CDK8_like Catalytic domain of Cyclin-Dependen	99.91
cd07831	282	STKc_MOK Catalytic domain of the Serine/Threonine	99.91
cd08218	256	STKc_Nek1 Catalytic domain of the Protein Serine/T	99.91
cd07837	295	STKc_CdkB_plant Catalytic domain of the Serine/Thr	99.91
cd06651	266	STKc_MEKK3 Catalytic domain of the Protein Serine/	99.91
KOG0696|consensus	683		99.91
cd08229	267	STKc_Nek7 Catalytic domain of the Protein Serine/T	99.91
cd05040	257	PTKc_Ack_like Catalytic domain of the Protein Tyro	99.91
cd06607	307	STKc_TAO Catalytic domain of the Protein Serine/Th	99.91
cd05055	302	PTKc_PDGFR Catalytic domain of the Protein Tyrosin	99.91
cd08224	267	STKc_Nek6_Nek7 Catalytic domain of the Protein Ser	99.91
cd05073	260	PTKc_Hck Catalytic domain of the Protein Tyrosine	99.91
cd06647	293	STKc_PAK_I Catalytic domain of the Protein Serine/	99.91
cd05098	307	PTKc_FGFR1 Catalytic domain of the Protein Tyrosin	99.91
cd08223	257	STKc_Nek4 Catalytic domain of the Protein Serine/T	99.91
cd05118	283	STKc_CMGC Catalytic domain of CMGC family Serine/T	99.91
cd07854	342	STKc_MAPK4_6 Catalytic domain of the Serine/Threon	99.91
cd06656	297	STKc_PAK3 Catalytic domain of the Protein Serine/T	99.91
cd07877	345	STKc_p38alpha_MAPK14 Catalytic domain of the Serin	99.91
cd05109	279	PTKc_HER2 Catalytic domain of the Protein Tyrosine	99.91
cd05572	262	STKc_cGK_PKG Catalytic domain of the Protein Serin	99.91
cd05053	293	PTKc_FGFR Catalytic domain of the Protein Tyrosine	99.91
cd06917	277	STKc_NAK1_like Catalytic domain of Fungal Nak1-lik	99.91
cd06641	277	STKc_MST3 Catalytic domain of the Protein Serine/T	99.91
cd06622	286	PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS	99.91
cd05578	258	STKc_Yank1 Catalytic domain of the Protein Serine/	99.91
cd05100	334	PTKc_FGFR3 Catalytic domain of the Protein Tyrosin	99.91
cd07852	337	STKc_MAPK15 Catalytic domain of the Serine/Threoni	99.91
KOG2345|consensus	302		99.91
KOG1006|consensus	361		99.91
cd05107	401	PTKc_PDGFR_beta Catalytic domain of the Protein Ty	99.91
cd06630	268	STKc_MEKK1 Catalytic domain of the Protein Serine/	99.9
cd07858	337	STKc_TEY_MAPK_plant Catalytic domain of the Serine	99.9
cd00192	262	PTKc Catalytic domain of Protein Tyrosine Kinases.	99.9
cd07855	334	STKc_ERK5 Catalytic domain of the Serine/Threonine	99.9
cd05095	296	PTKc_DDR2 Catalytic domain of the Protein Tyrosine	99.9
cd05054	337	PTKc_VEGFR Catalytic domain of the Protein Tyrosin	99.9
cd05057	279	PTKc_EGFR_like Catalytic domain of Epidermal Growt	99.9
cd06648	285	STKc_PAK_II Catalytic domain of the Protein Serine	99.9
PHA03211	461	serine/threonine kinase US3; Provisional	99.9
cd05574	316	STKc_phototropin_like Catalytic domain of Phototro	99.9
cd05577	277	STKc_GRK Catalytic domain of the Protein Serine/Th	99.9
cd06637	272	STKc_TNIK Catalytic domain of the Protein Serine/T	99.9
cd06621	287	PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek	99.9
cd05110	303	PTKc_HER4 Catalytic domain of the Protein Tyrosine	99.9
cd08217	265	STKc_Nek2 Catalytic domain of the Protein Serine/T	99.9
cd05112	256	PTKc_Itk Catalytic domain of the Protein Tyrosine	99.9
cd08216	314	PK_STRAD Pseudokinase domain of STE20-related kina	99.9
PHA03210	501	serine/threonine kinase US3; Provisional	99.9
cd05097	295	PTKc_DDR_like Catalytic domain of Discoidin Domain	99.9
cd06636	282	STKc_MAP4K4_6 Catalytic domain of the Protein Seri	99.9
cd07879	342	STKc_p38delta_MAPK13 Catalytic domain of the Serin	99.9
cd07856	328	STKc_Sty1_Hog1 Catalytic domain of the Serine/Thre	99.9
cd08225	257	STKc_Nek5 Catalytic domain of the Protein Serine/T	99.9
KOG0665|consensus	369		99.9
cd06639	291	STKc_myosinIIIB Catalytic domain of the Protein Se	99.9
cd06653	264	STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kina	99.9
cd06657	292	STKc_PAK4 Catalytic domain of the Protein Serine/T	99.9
cd06635	317	STKc_TAO1 Catalytic domain of the Protein Serine/T	99.9
cd06638	286	STKc_myosinIIIA Catalytic domain of the Protein Se	99.9
cd06620	284	PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr	99.9
cd07830	283	STKc_MAK_like Catalytic domain of Male germ cell-A	99.9
KOG0986|consensus	591		99.9
cd05611	260	STKc_Rim15_like Catalytic domain of fungal Rim15-l	99.9
cd06605	265	PKc_MAPKK Catalytic domain of the dual-specificity	99.9
cd06623	264	PKc_MAPKK_plant_like Catalytic domain of Plant dua	99.9
smart00219	258	TyrKc Tyrosine kinase, catalytic domain. Phosphotr	99.9
KOG1035|consensus	1351		99.9
cd06614	286	STKc_PAK Catalytic domain of the Protein Serine/Th	99.9
cd05038	284	PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the P	99.9
cd05051	296	PTKc_DDR Catalytic domain of the Protein Tyrosine	99.9
cd06632	258	STKc_MEKK1_plant Catalytic domain of the Protein S	99.9
cd07829	282	STKc_CDK_like Catalytic domain of Cyclin-Dependent	99.89
KOG0612|consensus	1317		99.89
cd06608	275	STKc_myosinIII_like Catalytic domain of Class III	99.89
cd05079	284	PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the	99.89
cd05037	259	PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the	99.89
cd05579	265	STKc_MAST_like Catalytic domain of Microtubule-ass	99.89
PHA03209	357	serine/threonine kinase US3; Provisional	99.89
cd07851	343	STKc_p38 Catalytic domain of the Serine/Threonine	99.89
cd05606	278	STKc_beta_ARK Catalytic domain of the Protein Seri	99.89
cd07857	332	STKc_MPK1 Catalytic domain of the Serine/Threonine	99.89
cd07834	330	STKc_MAPK Catalytic domain of the Serine/Threonine	99.89
cd05633	279	STKc_GRK3 Catalytic domain of the Protein Serine/T	99.89
cd06633	313	STKc_TAO3 Catalytic domain of the Protein Serine/T	99.89
cd07880	343	STKc_p38gamma_MAPK12 Catalytic domain of the Serin	99.89
cd07838	287	STKc_CDK4_6_like Catalytic domain of Cyclin-Depend	99.89
PF00069	260	Pkinase: Protein kinase domain Protein kinase; unc	99.89
cd06610	267	STKc_OSR1_SPAK Catalytic domain of the Protein Ser	99.89
cd08222	260	STKc_Nek11 Catalytic domain of the Protein Serine/	99.89
PHA03390	267	pk1 serine/threonine-protein kinase 1; Provisional	99.89
cd08530	256	STKc_CNK2-like Catalytic domain of the Protein Ser	99.88
cd05046	275	PTK_CCK4 Pseudokinase domain of the Protein Tyrosi	99.88
cd05103	343	PTKc_VEGFR2 Catalytic domain of the Protein Tyrosi	99.88
cd08226	328	PK_STRAD_beta Pseudokinase domain of STE20-related	99.88
cd06629	272	STKc_MAPKKK_Bck1_like Catalytic domain of fungal B	99.88
cd06634	308	STKc_TAO2 Catalytic domain of the Protein Serine/T	99.88
cd08528	269	STKc_Nek10 Catalytic domain of the Protein Serine/	99.88
KOG1151|consensus	775		99.88
cd05074	273	PTKc_Tyro3 Catalytic domain of the Protein Tyrosin	99.88
KOG0608|consensus	1034		99.88
cd08215	258	STKc_Nek Catalytic domain of the Protein Serine/Th	99.88
cd06616	288	PKc_MKK4 Catalytic domain of the dual-specificity	99.88
cd05613	290	STKc_MSK1_N N-terminal catalytic domain of the Pro	99.88
KOG0200|consensus	609		99.88
KOG1025|consensus	1177		99.88
cd06626	264	STKc_MEKK4 Catalytic domain of the Protein Serine/	99.87
cd05122	253	PKc_STE Catalytic domain of STE family Protein Kin	99.87
cd05123	250	STKc_AGC Catalytic domain of AGC family Protein Se	99.87
cd06627	254	STKc_Cdc7_like Catalytic domain of Cell division c	99.87
cd06617	283	PKc_MKK3_6 Catalytic domain of the dual-specificit	99.87
cd05576	237	STKc_RPK118_like Catalytic domain of the Protein S	99.87
PLN00113	968	leucine-rich repeat receptor-like protein kinase;	99.86
cd06606	260	STKc_MAPKKK Catalytic domain of the Protein Serine	99.86
KOG0983|consensus	391		99.86
cd05581	280	STKc_PDK1 Catalytic domain of the Protein Serine/T	99.86
KOG0603|consensus	612		99.85
PHA02882	294	putative serine/threonine kinase; Provisional	99.85
cd05583	288	STKc_MSK_N N-terminal catalytic domain of the Prot	99.85
cd06618	296	PKc_MKK7 Catalytic domain of the dual-specificity	99.84
KOG0670|consensus	752		99.84
KOG0576|consensus	829		99.83
cd05610	669	STKc_MASTL Catalytic domain of the Protein Serine/	99.83
KOG0695|consensus	593		99.83
smart00221	225	STYKc Protein kinase; unclassified specificity. Ph	99.82
KOG1290|consensus	590		99.82
smart00220	244	S_TKc Serine/Threonine protein kinases, catalytic	99.82
KOG2052|consensus	513		99.81
KOG3653|consensus	534		99.8
KOG1152|consensus	772		99.8
KOG1024|consensus	563		99.77
KOG1027|consensus	903		99.77
smart00750	176	KIND kinase non-catalytic C-lobe domain. It is an	99.73
KOG1167|consensus	418		99.71
PLN03225	566	Serine/threonine-protein kinase SNT7; Provisional	99.7
PLN03224	507	probable serine/threonine protein kinase; Provisio	99.69
KOG1345|consensus	378		99.69
PLN00181	793	protein SPA1-RELATED; Provisional	99.67
cd00180	215	PKc Catalytic domain of Protein Kinases. Protein K	99.67
KOG0195|consensus	448		99.65
KOG0603|consensus	612		99.51
KOG1023|consensus	484		99.41
KOG0590|consensus	601		99.41
PRK09188	365	serine/threonine protein kinase; Provisional	99.4
PRK10359	232	lipopolysaccharide core biosynthesis protein; Prov	99.4
COG0515	384	SPS1 Serine/threonine protein kinase [General func	99.34
PRK12274	218	serine/threonine protein kinase; Provisional	99.27
KOG4158|consensus	598		99.24
KOG0606|consensus	1205		99.19
KOG1033|consensus	516		99.11
PRK10345	210	hypothetical protein; Provisional	99.09
KOG1164|consensus	322		99.09
cd05147	190	RIO1_euk RIO kinase family; eukaryotic RIO1, catal	98.91
KOG1240|consensus	1431		98.86
PRK09605	535	bifunctional UGMP family protein/serine/threonine	98.85
KOG1163|consensus	341		98.77
KOG1165|consensus	449		98.74
cd05145	190	RIO1_like RIO kinase family; RIO1, RIO3 and simila	98.72
TIGR03724	199	arch_bud32 Kae1-associated kinase Bud32. Members o	98.7
PRK14879	211	serine/threonine protein kinase; Provisional	98.65
KOG1243|consensus	690		98.59
KOG0590|consensus	601		98.43
KOG1166|consensus	974		98.38
KOG0606|consensus	1205		98.31
PF14531	288	Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_	98.29
smart00090	237	RIO RIO-like kinase.	98.26
cd05144	198	RIO2_C RIO kinase family; RIO2, C-terminal catalyt	98.22
PRK01723	239	3-deoxy-D-manno-octulosonic-acid kinase; Reviewed	98.13
KOG1266|consensus	458		98.1
cd05120	155	APH_ChoK_like Aminoglycoside 3'-phosphotransferase	98.01
KOG0601|consensus	524		97.74
KOG3741|consensus	655		97.6
cd05119	187	RIO RIO kinase family, catalytic domain. The RIO k	97.57
cd05151	170	ChoK Choline Kinase (ChoK). The ChoK subfamily is	97.39
KOG0601|consensus	524		97.29
KOG0576|consensus	829		97.29
COG3642	204	Mn2+-dependent serine/threonine protein kinase [Si	97.27
cd05146	197	RIO3_euk RIO kinase family; eukaryotic RIO3, catal	96.67
KOG1093|consensus	725		96.4
KOG3087|consensus	229		96.06
PF01163	188	RIO1: RIO1 family; InterPro: IPR018934 Protein pho	95.88
KOG1035|consensus	1351		95.86
TIGR01982	437	UbiB 2-polyprenylphenol 6-hydroxylase. This model	95.84
COG4248	637	Uncharacterized protein with protein kinase and he	95.07
cd05154	223	ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 an	94.51
KOG2137|consensus	700		93.49
PF12260	188	PIP49_C: Protein-kinase domain of FAM69; InterPro:	92.62
PF06176	229	WaaY: Lipopolysaccharide core biosynthesis protein	92.57
PF06293	206	Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family;	92.34
KOG1826|consensus	2724		89.89
PLN02876	822	acyl-CoA dehydrogenase	88.29
PRK04750	537	ubiB putative ubiquinone biosynthesis protein UbiB	88.22
PRK15123	268	lipopolysaccharide core heptose(I) kinase RfaP; Pr	87.5
cd05150	244	APH Aminoglycoside 3'-phosphotransferase (APH). Th	85.13

>KOG0600|consensus

Probab=100.00  E-value=5.5e-38  Score=251.08  Aligned_cols=175  Identities=31%  Similarity=0.561  Sum_probs=147.3

Q ss_pred             cccccc-cCC-ccccccccccchh-----hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSK-WSPNTPMARCDVN-----VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~-~~~~~~i~~~~~~-----~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||+||+ .+. ...++|+||...+     ...-..|||.||++|+||||+++.++.++      ......|+|+|||...
T Consensus       130 yg~VYkAr~~~tgkivALKKvr~d~~~~~~~~t~~REI~ILr~l~HpNIikL~eivt~------~~~~siYlVFeYMdhD  203 (560)
T KOG0600|consen  130 YGQVYKARDLETGKIVALKKVRFDNEKEGFPITAIREIKILRRLDHPNIIKLEEIVTS------KLSGSIYLVFEYMDHD  203 (560)
T ss_pred             hhheeEeeecccCcEEEEEEeecccCCCcchHHHHHHHHHHHhcCCCcccceeeEEEe------cCCceEEEEEecccch
Confidence            799999 333 3338888885322     23446899999999999999999998633      2356889999999754


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCT  123 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~  123 (188)
                      .....        +.+++.++ +|+++||+|||+++       .+||       |||+|||+++            .+-|
T Consensus       204 L~GLl~~p~vkft~~qIKc~m-kQLl~Gl~~cH~~gvlHRDIK~SNiLidn~G~LKiaDFGLAr~y~~~~~~~~T~rVvT  282 (560)
T KOG0600|consen  204 LSGLLSSPGVKFTEPQIKCYM-KQLLEGLEYCHSRGVLHRDIKGSNILIDNNGVLKIADFGLARFYTPSGSAPYTSRVVT  282 (560)
T ss_pred             hhhhhcCCCcccChHHHHHHH-HHHHHHHHHHhhcCeeeccccccceEEcCCCCEEeccccceeeccCCCCcccccceEE
Confidence            43332        57899999 99999999999998       3444       7999999866            3458


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .||  +|||++++...|+.++|+||+|||+.||+.|++.|+|.+..+++..|++++|.|.++.||
T Consensus       283 LWY--RpPELLLG~t~Yg~aVDlWS~GCIl~El~~gkPI~~G~tEveQl~kIfklcGSP~e~~W~  345 (560)
T KOG0600|consen  283 LWY--RPPELLLGATSYGTAVDLWSVGCILAELFLGKPILQGRTEVEQLHKIFKLCGSPTEDYWP  345 (560)
T ss_pred             eec--cChHHhcCCcccccceeehhhhHHHHHHHcCCCCcCCccHHHHHHHHHHHhCCCChhccc
Confidence            899  999999998889999999999999999999999999999999999999999999999997

>KOG0595|consensus

Probab=100.00  E-value=1.3e-36  Score=237.97  Aligned_cols=161  Identities=20%  Similarity=0.260  Sum_probs=135.6

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      |+.||+     ++..++||.|.+.  ..+..+-+..|+++|+.++|||||++++++        ..++..|+|||||.+|
T Consensus        23 favVykg~h~~~~~~VAIK~i~~~~l~~k~~e~L~~Ei~iLkel~H~nIV~l~d~~--------~~~~~i~lVMEyC~gG   94 (429)
T KOG0595|consen   23 FAVVYKGRHKKSGTEVAIKCIAKKKLNKKLVELLLSEIKILKELKHPNIVRLLDCI--------EDDDFIYLVMEYCNGG   94 (429)
T ss_pred             eEEEEEeEeccCCceEEeeeehhhccCHHHHHHHHHHHHHHHhcCCcceeeEEEEE--------ecCCeEEEEEEeCCCC
Confidence            778888     2233345555443  455667789999999999999999999985        5677999999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------------EEEecCCccc----------
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------------KKFVGIGIGR----------  119 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------------lkl~dfg~~~----------  119 (188)
                      ||..+        +..++.++ .|++.||++||+++       |+||             +||+|||+++          
T Consensus        95 DLs~yi~~~~~l~e~t~r~Fm-~QLA~alq~L~~~~IiHRDLKPQNiLLs~~~~~~~~~~LKIADFGfAR~L~~~~~a~t  173 (429)
T KOG0595|consen   95 DLSDYIRRRGRLPEATARHFM-QQLASALQFLHENNIIHRDLKPQNILLSTTARNDTSPVLKIADFGFARFLQPGSMAET  173 (429)
T ss_pred             CHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeccCCcceEEeccCCCCCCCceEEecccchhhhCCchhHHHH
Confidence            99997        45678888 89999999999998       5555             6999999865          


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      .+|++.|  ||||++.... |+.|+|+||+|+|+|++++|++||...+..+.+..+.+
T Consensus       174 lcGSplY--MAPEV~~~~~-YdAKADLWSiG~Ilyq~l~g~~Pf~a~t~~eL~~~~~k  228 (429)
T KOG0595|consen  174 LCGSPLY--MAPEVIMSQQ-YDAKADLWSIGTILYQCLTGKPPFDAETPKELLLYIKK  228 (429)
T ss_pred             hhCCccc--cCHHHHHhcc-ccchhhHHHHHHHHHHHHhCCCCccccCHHHHHHHHhc
Confidence            6799999  9999997755 99999999999999999999999998888888776654

>KOG0659|consensus

Probab=100.00  E-value=3.3e-36  Score=224.62  Aligned_cols=174  Identities=35%  Similarity=0.626  Sum_probs=143.8

Q ss_pred             ccccccc-c-CCccccccccccch-----hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           4 VCFKPFQ-Q-SKWSPNTPMARCDV-----NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         4 ~~g~v~~-~-~~~~~~~~i~~~~~-----~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      .||.||+ . .+....+||||...     ...-.+.|||+.|+.++|+||+.+.++|        .......+|+||++.
T Consensus        14 ~~gvVyka~d~~t~~~VAIKKIkl~~~kdGi~~talREIK~Lqel~h~nIi~LiD~F--------~~~~~l~lVfEfm~t   85 (318)
T KOG0659|consen   14 TYGVVYKARDTETGKRVAIKKIKLGNAKDGINRTALREIKLLQELKHPNIIELIDVF--------PHKSNLSLVFEFMPT   85 (318)
T ss_pred             ceEEEEEEEecCCCcEEEEEEeeccccccCccHHHHHHHHHHHHccCcchhhhhhhc--------cCCCceEEEEEeccc
Confidence            4788998 2 22222455555322     2234689999999999999999999986        567788999999965


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-----------ccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-----------VCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~  123 (188)
                      ..-..+        ..+++.++ .++++|++|||++.       |+|+       +|++|||+++.           +-|
T Consensus        86 dLe~vIkd~~i~l~pa~iK~y~-~m~LkGl~y~H~~~IlHRDlKPnNLLis~~g~lKiADFGLAr~f~~p~~~~~~~V~T  164 (318)
T KOG0659|consen   86 DLEVVIKDKNIILSPADIKSYM-LMTLKGLAYCHSKWILHRDLKPNNLLISSDGQLKIADFGLARFFGSPNRIQTHQVVT  164 (318)
T ss_pred             cHHHHhcccccccCHHHHHHHH-HHHHHHHHHHHhhhhhcccCCccceEEcCCCcEEeecccchhccCCCCcccccceee
Confidence            433222        35688888 79999999999987       6666       69999999764           347


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .||  +|||++.+.+.|+..+||||.|||+.|++.+.|.|+|.++.+++..|++.+|+|.+++||
T Consensus       165 RWY--RAPELLfGsr~Yg~~VDmWavGCI~AELllr~P~fpG~sDidQL~~If~~LGTP~~~~WP  227 (318)
T KOG0659|consen  165 RWY--RAPELLFGSRQYGTGVDMWAVGCIFAELLLRVPFFPGDSDIDQLSKIFRALGTPTPDQWP  227 (318)
T ss_pred             eec--cChHHhccchhcCCcchhhhHHHHHHHHHccCCCCCCCchHHHHHHHHHHcCCCCcccCc
Confidence            899  999999999899999999999999999999999999999999999999999999999998

>KOG0663|consensus

Probab=100.00  E-value=9.3e-36  Score=228.44  Aligned_cols=175  Identities=33%  Similarity=0.556  Sum_probs=147.1

Q ss_pred             cccccc-cCCcc-ccccccccchhhhh-----HHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVET-----QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~-----~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .++.. -|+|+||...+..+     ..+|||.+|.+++|||||.+..+.      .+.+-+..|+|||||...
T Consensus        89 yGiVYRakdk~t~eIVALKr~kmekek~GFPItsLREIniLl~~~H~NIV~vkEVV------vG~~~d~iy~VMe~~EhD  162 (419)
T KOG0663|consen   89 YGVVYRAKDKKTDEIVALKRLKMEKEKEGFPITSLREINILLKARHPNIVEVKEVV------VGSNMDKIYIVMEYVEHD  162 (419)
T ss_pred             ceeEEEeccCCcceeEEeeecccccccCCCcchhHHHHHHHHhcCCCCeeeeEEEE------eccccceeeeeHHHHHhh
Confidence            899999 44444 49999986433322     368999999999999999999875      234456689999999654


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccccc-----------cc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVC-----------TL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~-----------~~  124 (188)
                      .-..+        ..+++.++ .|++.|++|||++.       ++|+       +||+|||+++..|           |.
T Consensus       163 Lksl~d~m~q~F~~~evK~L~-~QlL~glk~lH~~wilHRDLK~SNLLm~~~G~lKiaDFGLAR~ygsp~k~~T~lVVTL  241 (419)
T KOG0663|consen  163 LKSLMETMKQPFLPGEVKTLM-LQLLRGLKHLHDNWILHRDLKTSNLLLSHKGILKIADFGLAREYGSPLKPYTPLVVTL  241 (419)
T ss_pred             HHHHHHhccCCCchHHHHHHH-HHHHHHHHHHhhceeEecccchhheeeccCCcEEecccchhhhhcCCcccCcceEEEe
Confidence            44333        45688888 89999999999987       5555       6999999977444           67


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ||  +|||++++.+.|+...||||+|||+.|++.++|.|.|.+..+++.+|++.+|+|..+.||
T Consensus       242 WY--RaPELLLG~~tyst~iDMWSvGCI~aE~l~~kPlf~G~sE~dQl~~If~llGtPte~iwp  303 (419)
T KOG0663|consen  242 WY--RAPELLLGAKTYSTAVDMWSVGCIFAELLTQKPLFPGKSEIDQLDKIFKLLGTPSEAIWP  303 (419)
T ss_pred             ee--cCHHHhcCCcccCcchhhhhHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhCCCccccCC
Confidence            99  999999998889999999999999999999999999999999999999999999999998

>KOG0197|consensus

Probab=100.00  E-value=2.9e-35  Score=236.81  Aligned_cols=174  Identities=19%  Similarity=0.252  Sum_probs=143.5

Q ss_pred             ccccccc---cCC-ccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           4 VCFKPFQ---QSK-WSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         4 ~~g~v~~---~~~-~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      .||.|+.   .++ -+++|.++..+ -..+.+.+|+++|++|+|+|||+++++|.        .+...+|||||++.|+|
T Consensus       218 ~FG~V~~g~~~~~~~vavk~ik~~~-m~~~~f~~Ea~iMk~L~H~~lV~l~gV~~--------~~~piyIVtE~m~~GsL  288 (468)
T KOG0197|consen  218 QFGEVWLGKWNGSTKVAVKTIKEGS-MSPEAFLREAQIMKKLRHEKLVKLYGVCT--------KQEPIYIVTEYMPKGSL  288 (468)
T ss_pred             ccceEEEEEEcCCCcccceEEeccc-cChhHHHHHHHHHHhCcccCeEEEEEEEe--------cCCceEEEEEecccCcH
Confidence            3899998   333 33477666642 23467889999999999999999999973        34479999999999999


Q ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCcccccccccccC-------
Q psy7174          80 ARFY----------SHLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHVCTLYCTR-------  128 (188)
Q Consensus        80 ~~~~----------~~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~~~~~~y~~-------  128 (188)
                      .+++          ..+..++ .||++||+||.+++              .++++||+|||+++..+...|+.       
T Consensus       289 l~yLr~~~~~~l~~~~Ll~~a-~qIaeGM~YLes~~~IHRDLAARNiLV~~~~~vKIsDFGLAr~~~d~~Y~~~~~~kfP  367 (468)
T KOG0197|consen  289 LDYLRTREGGLLNLPQLLDFA-AQIAEGMAYLESKNYIHRDLAARNILVDEDLVVKISDFGLARLIGDDEYTASEGGKFP  367 (468)
T ss_pred             HHHhhhcCCCccchHHHHHHH-HHHHHHHHHHHhCCccchhhhhhheeeccCceEEEcccccccccCCCceeecCCCCCC
Confidence            9874          3355566 79999999999988              33447999999998655433321       


Q ss_pred             ---CCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         129 ---GAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       129 ---~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                         .|||.+...+ |+.+||||||||+|||++| |+.|+.++++.+.++.+.++.+.|.|+.||
T Consensus       368 IkWtAPEa~~~~~-FS~kSDVWSFGVlL~E~fT~G~~py~~msn~ev~~~le~GyRlp~P~~CP  430 (468)
T KOG0197|consen  368 IKWTAPEALNYGK-FSSKSDVWSFGVLLWELFTYGRVPYPGMSNEEVLELLERGYRLPRPEGCP  430 (468)
T ss_pred             ceecCHHHHhhCC-cccccceeehhhhHHHHhccCCCCCCCCCHHHHHHHHhccCcCCCCCCCC
Confidence               5999998876 9999999999999999996 999999999999999999999999999998

>KOG0598|consensus

Probab=100.00  E-value=6.9e-35  Score=225.88  Aligned_cols=169  Identities=20%  Similarity=0.241  Sum_probs=144.1

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||+||+     +++.-++|.++|.   ..+..++...|..||++++||+||+++-.|        ++...+|+|+||+.|
T Consensus        38 fGkV~~Vrk~dt~kiYAmKvl~K~~iv~~~e~~~~~~Er~IL~~v~hPFiv~l~ysF--------Qt~~kLylVld~~~G  109 (357)
T KOG0598|consen   38 FGKVFQVRKKDTGKIYAMKVLKKKKIVEKKEVRHTKAERNILSKIKHPFIVKLIYSF--------QTEEKLYLVLDYLNG  109 (357)
T ss_pred             CceEEEEEEcccCceeehhhhhhhHhhhhhhHHHHHHHHHHHHhCCCCcEeeeEEec--------ccCCeEEEEEeccCC
Confidence            899998     4445556667663   334577889999999999999999998743        889999999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      |+|...        ++..++++ ++|+.||.|||+.+       |+||       ++|+|||+++           ++||
T Consensus       110 GeLf~hL~~eg~F~E~~arfYl-aEi~lAL~~LH~~gIiyRDlKPENILLd~~GHi~LtDFgL~k~~~~~~~~t~tfcGT  188 (357)
T KOG0598|consen  110 GELFYHLQREGRFSEDRARFYL-AEIVLALGYLHSKGIIYRDLKPENILLDEQGHIKLTDFGLCKEDLKDGDATRTFCGT  188 (357)
T ss_pred             ccHHHHHHhcCCcchhHHHHHH-HHHHHHHHHHHhCCeeeccCCHHHeeecCCCcEEEeccccchhcccCCCccccccCC
Confidence            998764        45577888 79999999999999       8888       4999999844           6899


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      +.|  +|||++...+ |+..+|+||||+++|||++|.+||.+.+.....++|.+.-...+|.
T Consensus       189 ~eY--mAPEil~~~g-y~~~vDWWsLGillYeML~G~pPF~~~~~~~~~~~I~~~k~~~~p~  247 (357)
T KOG0598|consen  189 PEY--MAPEILLGKG-YDKAVDWWSLGILLYEMLTGKPPFYAEDVKKMYDKILKGKLPLPPG  247 (357)
T ss_pred             ccc--cChHHHhcCC-CCcccchHhHHHHHHHHhhCCCCCcCccHHHHHHHHhcCcCCCCCc
Confidence            999  9999999876 9999999999999999999999999999999999998765443433

>KOG0591|consensus

Probab=100.00  E-value=1.4e-35  Score=223.21  Aligned_cols=170  Identities=21%  Similarity=0.282  Sum_probs=137.5

Q ss_pred             ccccccc-cCCccc-cccccc-----cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCc-cEEEEeccc
Q psy7174           4 VCFKPFQ-QSKWSP-NTPMAR-----CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSS-DYIVVKIFT   75 (188)
Q Consensus         4 ~~g~v~~-~~~~~~-~~~i~~-----~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~-~~iv~e~~~   75 (188)
                      .||.||+ +..... .+|.|+     .+.+.++....|+.+|++|+|||||++++.       .+.++.. ++++||+|.
T Consensus        31 sFg~vykv~~~~~g~l~a~K~i~f~~md~k~rq~~v~Ei~lLkQL~HpNIVqYy~~-------~f~~~~evlnivmE~c~  103 (375)
T KOG0591|consen   31 SFGEVYKVQCLLDGKLVALKKIQFGMMDAKARQDCVKEISLLKQLNHPNIVQYYAH-------SFIEDNEVLNIVMELCD  103 (375)
T ss_pred             cchheEEeeeccCcchhhhhhcchhhccHHHHHHHHHHHHHHHhcCCchHHHHHHH-------hhhccchhhHHHHHhhc
Confidence            4889998 444433 555555     356677889999999999999999999984       3344555 799999999


Q ss_pred             cccHHHHH------------HHHHHHHHHHHHHHHHHHhh--cC---------CCCe-------EEEecCCccc------
Q psy7174          76 KTTKARFY------------SHLRYLENQQILEGLQALKS--SM---------PALL-------KKFVGIGIGR------  119 (188)
Q Consensus        76 ~~~l~~~~------------~~~~~~~~~qi~~gl~~lH~--~~---------~~~i-------lkl~dfg~~~------  119 (188)
                      +|+|.++.            ..+..++ .|++.||.+||+  .+         |.||       +|+.|||+++      
T Consensus       104 ~GDLsqmIk~~K~qkr~ipE~~Vwk~f-~QL~~AL~~cH~~~~r~~VmHRDIKPaNIFl~~~gvvKLGDfGL~r~l~s~~  182 (375)
T KOG0591|consen  104 AGDLSQMIKHFKKQKRLIPEKTVWKYF-VQLCRALYHCHSKIPRGTVMHRDIKPANIFLTANGVVKLGDFGLGRFLSSKT  182 (375)
T ss_pred             ccCHHHHHHHHHhccccCchHHHHHHH-HHHHHHHHHHhccccccceeeccCcchheEEcCCCceeeccchhHhHhcchh
Confidence            99999863            3355555 599999999999  22         5555       7999999843      


Q ss_pred             -----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         120 -----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                           .+||+.|  |+||.+...+ |+.+|||||+||++|||+.-++||.|++-.+.-.+|.+.-.+|.|
T Consensus       183 tfA~S~VGTPyY--MSPE~i~~~~-Y~~kSDiWslGCllyEMcaL~~PF~g~n~~~L~~KI~qgd~~~~p  249 (375)
T KOG0591|consen  183 TFAHSLVGTPYY--MSPERIHESG-YNFKSDIWSLGCLLYEMCALQSPFYGDNLLSLCKKIEQGDYPPLP  249 (375)
T ss_pred             HHHHhhcCCCcc--cCHHHHhcCC-CCcchhHHHHHHHHHHHHhcCCCcccccHHHHHHHHHcCCCCCCc
Confidence                 6899999  9999999876 999999999999999999999999999887777788776555555

>KOG0661|consensus

Probab=100.00  E-value=8.7e-35  Score=231.39  Aligned_cols=174  Identities=30%  Similarity=0.498  Sum_probs=145.4

Q ss_pred             cccccc-cCCccc-cccccccch--hhhhH--HHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARCDV--NVETQ--AKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~~~--~~~~~--~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.|+. .++... .+|||+...  ...++  -+||++.|++++ |||||++++++.+       .++.+++|||||...
T Consensus        23 fGsV~la~~~~~~~~VAIK~MK~Kf~s~ee~~nLREvksL~kln~hpniikL~Evi~d-------~~~~L~fVfE~Md~N   95 (538)
T KOG0661|consen   23 FGSVYLAKSKETGELVAIKKMKKKFYSWEECMNLREVKSLRKLNPHPNIIKLKEVIRD-------NDRILYFVFEFMDCN   95 (538)
T ss_pred             ceeEEEeeecCCCceeeHHHHHhhhccHHHHHHHHHHHHHHhcCCCCcchhhHHHhhc-------cCceEeeeHHhhhhh
Confidence            899998 444333 556665311  12333  368999999999 9999999998632       123899999999766


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------cccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLY  125 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~  125 (188)
                      ..+.+        +..++.++ .||+.||+|+|.+|       |+||       +||+|||+++          ++.|.|
T Consensus        96 LYqLmK~R~r~fse~~irnim-~QilqGL~hiHk~GfFHRDlKPENiLi~~~~~iKiaDFGLARev~SkpPYTeYVSTRW  174 (538)
T KOG0661|consen   96 LYQLMKDRNRLFSESDIRNIM-YQILQGLAHIHKHGFFHRDLKPENILISGNDVIKIADFGLAREVRSKPPYTEYVSTRW  174 (538)
T ss_pred             HHHHHhhcCCcCCHHHHHHHH-HHHHHHHHHHHhcCcccccCChhheEecccceeEecccccccccccCCCcchhhhccc
Confidence            55554        57789999 99999999999999       6666       5999999866          678999


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||+++.+..|+.+.|||++|||++|+.+-++.|+|.+..+++-+|.+.+|+|..+.||
T Consensus       175 Y--RAPEvLLrs~~Ys~pvD~wA~GcI~aEl~sLrPLFPG~sE~Dqi~KIc~VLGtP~~~~~~  235 (538)
T KOG0661|consen  175 Y--RAPEVLLRSGYYSSPVDMWAVGCIMAELYSLRPLFPGASEIDQIYKICEVLGTPDKDSWP  235 (538)
T ss_pred             c--cchHHhhhccccCCchHHHHHHHHHHHHHHhcccCCCCcHHHHHHHHHHHhCCCccccch
Confidence            9  999999988889999999999999999999999999999999999999999999999997

>KOG0575|consensus

Probab=100.00  E-value=3.3e-34  Score=233.69  Aligned_cols=151  Identities=23%  Similarity=0.327  Sum_probs=129.5

Q ss_pred             cccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------
Q psy7174          14 WSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------   82 (188)
Q Consensus        14 ~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------   82 (188)
                      -.++|.|-+.   ....+++..+||+|.+.|+|||||+++++|        .+....|++.|+|..+++..+        
T Consensus        45 ~~A~KvVpk~~l~k~~~reKv~~EIeIHr~L~HpnIV~f~~~F--------EDs~nVYivLELC~~~sL~el~Krrk~lt  116 (592)
T KOG0575|consen   45 VVAVKVVPKKLLKKPKQREKVLNEIEIHRSLKHPNIVQFYHFF--------EDSNNVYIVLELCHRGSLMELLKRRKPLT  116 (592)
T ss_pred             EEEEEEeehHHhcCcchHHHHHHHHHHHHhcCCCcEEeeeeEe--------ecCCceEEEEEecCCccHHHHHHhcCCCC
Confidence            3445555552   456778899999999999999999999986        677899999999999999886        


Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCcccccc
Q psy7174          83 YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGA  137 (188)
Q Consensus        83 ~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~  137 (188)
                      +.++++++ +||+.||.|||+.+       -+|+       |||+|||++.           .+||+.|  .|||++...
T Consensus       117 EpEary~l-~QIv~GlkYLH~~~IiHRDLKLGNlfL~~~~~VKIgDFGLAt~le~~~Erk~TlCGTPNY--IAPEVl~k~  193 (592)
T KOG0575|consen  117 EPEARYFL-RQIVEGLKYLHSLGIIHRDLKLGNLFLNENMNVKIGDFGLATQLEYDGERKKTLCGTPNY--IAPEVLNKS  193 (592)
T ss_pred             cHHHHHHH-HHHHHHHHHHHhcCceecccchhheeecCcCcEEecccceeeeecCcccccceecCCCcc--cChhHhccC
Confidence            46789999 99999999999998       2233       7999999965           6899999  999999876


Q ss_pred             CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         138 RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       138 ~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      . ++-.+||||+||++|.|+.|+|||...+-.+++.+|.
T Consensus       194 g-HsfEvDiWSlGcvmYtLL~G~PPFetk~vkety~~Ik  231 (592)
T KOG0575|consen  194 G-HSFEVDIWSLGCVMYTLLVGRPPFETKTVKETYNKIK  231 (592)
T ss_pred             C-CCCchhhhhhhhHHHhhhhCCCCcccchHHHHHHHHH
Confidence            5 9999999999999999999999999887777776663

>KOG0615|consensus

Probab=100.00  E-value=5e-35  Score=229.36  Aligned_cols=166  Identities=19%  Similarity=0.248  Sum_probs=128.8

Q ss_pred             cCCccccccccc-----cch--hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-
Q psy7174          11 QSKWSPNTPMAR-----CDV--NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-   82 (188)
Q Consensus        11 ~~~~~~~~~i~~-----~~~--~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-   82 (188)
                      +.+..++|.+.+     |+.  .......+|++||++|+|||||+++++|        ......|+|+||+.||+|.+. 
T Consensus       196 tgk~vAiKIi~krk~~~~s~~~~~~~~v~~EieILkkL~HP~IV~~~d~f--------~~~ds~YmVlE~v~GGeLfd~v  267 (475)
T KOG0615|consen  196 TGKQVAIKIINKRKSTGCSRAIAKTRDVQNEIEILKKLSHPNIVRIKDFF--------EVPDSSYMVLEYVEGGELFDKV  267 (475)
T ss_pred             cCcEEEeeeeehhhcccccccccchhhhHHHHHHHHhcCCCCEEEEeeee--------ecCCceEEEEEEecCccHHHHH
Confidence            566677777776     221  1223457999999999999999999986        445667999999999999875 


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccccccC
Q psy7174          83 -------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        83 -------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                             ++..+.++ +|++.|+.|||++|       |+||          +||+|||++.          .+||+.|  
T Consensus       268 v~nk~l~ed~~K~~f-~Qll~avkYLH~~GI~HRDiKPeNILl~~~~e~~llKItDFGlAK~~g~~sfm~TlCGTpsY--  344 (475)
T KOG0615|consen  268 VANKYLREDLGKLLF-KQLLTAVKYLHSQGIIHRDIKPENILLSNDAEDCLLKITDFGLAKVSGEGSFMKTLCGTPSY--  344 (475)
T ss_pred             HhccccccchhHHHH-HHHHHHHHHHHHcCcccccCCcceEEeccCCcceEEEecccchhhccccceehhhhcCCccc--
Confidence                   34566777 99999999999999       8887          5999999865          6789999  


Q ss_pred             CCCccccccC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHhhcCCCCCCCC
Q psy7174         129 GAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPGESDLD-QLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       129 ~aPe~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~~~~~p~~~~~  187 (188)
                      .|||++.+..  .+..++|+||+||++|-+++|.+||.+..... ..++|.++--..-|..|
T Consensus       345 vAPEVl~~kg~~~~~~kVDiWSlGcvLfvcLsG~pPFS~~~~~~sl~eQI~~G~y~f~p~~w  406 (475)
T KOG0615|consen  345 VAPEVLASKGVEYYPSKVDIWSLGCVLFVCLSGYPPFSEEYTDPSLKEQILKGRYAFGPLQW  406 (475)
T ss_pred             cChhheecCCeecccchheeeeccceEEEEeccCCCcccccCCccHHHHHhcCcccccChhh
Confidence            9999997643  34568999999999999999999998765433 55666554333333333

>KOG0593|consensus

Probab=100.00  E-value=1.7e-34  Score=219.20  Aligned_cols=169  Identities=27%  Similarity=0.393  Sum_probs=145.6

Q ss_pred             cccccc-cCCccc-ccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|-||+ .+|... ++|||+-     +....+-++|||+.|++++|+|+|.++++|        -..+..++|+|||...
T Consensus        15 YGvV~KCrnk~TgqIVAIKkF~Esedd~~VkKIAlREIrmLKqLkH~NLVnLiEVF--------rrkrklhLVFE~~dhT   86 (396)
T KOG0593|consen   15 YGVVMKCRNKDTGQIVAIKKFVESEDDPVVKKIALREIRMLKQLKHENLVNLIEVF--------RRKRKLHLVFEYCDHT   86 (396)
T ss_pred             ceEEEEeccCCcccEEEEEeeccCCccHHHHHHHHHHHHHHHhcccchHHHHHHHH--------HhcceeEEEeeecchH
Confidence            677888 677776 9999993     233456679999999999999999999986        4467889999999998


Q ss_pred             cHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      -|..++        ..++.++ .|++.|+.|||+++       |+||       +|+||||+++           .+.|.
T Consensus        87 vL~eLe~~p~G~~~~~vk~~l-~Q~l~ai~~cHk~n~IHRDIKPENILit~~gvvKLCDFGFAR~L~~pgd~YTDYVATR  165 (396)
T KOG0593|consen   87 VLHELERYPNGVPSELVKKYL-YQLLKAIHFCHKNNCIHRDIKPENILITQNGVVKLCDFGFARTLSAPGDNYTDYVATR  165 (396)
T ss_pred             HHHHHHhccCCCCHHHHHHHH-HHHHHHhhhhhhcCeecccCChhheEEecCCcEEeccchhhHhhcCCcchhhhhhhhh
Confidence            888763        4577777 89999999999998       7777       5999999865           45689


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ||  +|||++.+...|+..+|||++||++.||++|.+.|+|.++.+++-.|...+|.-+|
T Consensus       166 WY--RaPELLvGDtqYG~pVDiWAiGCv~aEl~~G~pL~PG~SDiDQLy~I~ktLG~L~p  223 (396)
T KOG0593|consen  166 WY--RAPELLVGDTQYGKPVDIWAIGCVFAELLTGEPLWPGRSDIDQLYLIRKTLGNLIP  223 (396)
T ss_pred             hc--cChhhhcccCcCCCcccchhhhHHHHHHhcCCcCCCCcchHHHHHHHHHHHcccCH
Confidence            99  99999999777999999999999999999999999999999999999888876554

>KOG0594|consensus

Probab=100.00  E-value=3.8e-33  Score=215.57  Aligned_cols=178  Identities=31%  Similarity=0.586  Sum_probs=145.0

Q ss_pred             cccccc-cCCccc-cccccccchh-----hhhHHHHHHHHHHhCCCCC-eeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARCDVN-----VETQAKAEGKQDRRLDYAN-IIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~~~~-----~~~~~~~E~~il~~l~h~n-iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      +|.||+ .++... ++|+|+...+     ....+.||+.+|+.++|+| |++++++++....  .......++++||+..
T Consensus        24 yg~Vykar~~~~g~~VALKkirl~~~~EG~P~taiREisllk~L~~~~~iv~L~dv~~~~~~--~~~~~~l~lvfe~~d~  101 (323)
T KOG0594|consen   24 YGVVYKARSKRTGKFVALKKIRLEFEEEGVPSTAIREISLLKRLSHANHIVRLHDVIHTSNN--HRGIGKLYLVFEFLDR  101 (323)
T ss_pred             ceEEEEEEEecCCCEEEEEEEeccccccCCCchhhHHHHHHHHhCCCcceEEEEeeeeeccc--ccccceEEEEEEeecc
Confidence            688998 344444 7777775222     3356799999999999999 9999998744211  1222367899999854


Q ss_pred             ccHHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          77 TTKARFY------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        77 ~~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                       ++..+.            ..++.++ +|++.||+|||+++       |+|+       +|++|||+++           
T Consensus       102 -DL~~ymd~~~~~~~g~~~~~ik~~m-~Qll~gl~~~H~~~IlHRDLKPQNlLi~~~G~lKlaDFGlAra~~ip~~~yt~  179 (323)
T KOG0594|consen  102 -DLKKYMDSLPKKPQGLPPRLIKSFM-RQLLRGLAFLHSHGILHRDLKPQNLLISSSGVLKLADFGLARAFSIPMRTYTP  179 (323)
T ss_pred             -cHHHHHHhccccccCCCHHHHHHHH-HHHHHHHHHHHhCCeecccCCcceEEECCCCcEeeeccchHHHhcCCcccccc
Confidence             444331            2477888 89999999999999       7777       5999999854           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .+.|.||  +|||++.+...|+..+||||+|||+.||+++++.|.|.++.+++.+|.+.+++|.++.||
T Consensus       180 evvTlWY--RaPEvLlGs~~Ys~~vDiWs~GcIfaEm~~~~~LFpG~se~~ql~~If~~lGtP~e~~Wp  246 (323)
T KOG0594|consen  180 EVVTLWY--RAPEVLLGSTSYSTSVDIWSLGCIFAEMFTRRPLFPGDSEIDQLFRIFRLLGTPNEKDWP  246 (323)
T ss_pred             cEEEeec--cCHHHhcCCCcCCCCcchHhHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHcCCCCccCCC
Confidence            4568899  999999998789999999999999999999999999999999999999999999999998

>KOG0660|consensus

Probab=100.00  E-value=1.3e-33  Score=218.32  Aligned_cols=155  Identities=35%  Similarity=0.558  Sum_probs=133.8

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQIL   95 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~   95 (188)
                      .....++..||+++|+.++|+||+.+++++..   +...+-+..|+|+|++ +.+|.++        ++++++++ .|++
T Consensus        61 ~~~~akRtlRElklLr~~~HeNIi~l~di~~p---~~~~~f~DvYiV~elM-etDL~~iik~~~~L~d~H~q~f~-YQiL  135 (359)
T KOG0660|consen   61 NQIDAKRTLRELKLLRHLRHENIIGLLDIFRP---PSRDKFNDVYLVFELM-ETDLHQIIKSQQDLTDDHAQYFL-YQIL  135 (359)
T ss_pred             chHHHHHHHHHHHHHHHhcCCCcceEEeeccc---ccccccceeEEehhHH-hhHHHHHHHcCccccHHHHHHHH-HHHH
Confidence            34556788999999999999999999998633   2334456779999998 6677664        46788888 9999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCCchhHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      .||+|+|+.+       |+|+       +||+|||+++.             +.|.||  +|||++.+...|+...||||
T Consensus       136 rgLKyiHSAnViHRDLKPsNll~n~~c~lKI~DFGLAR~~~~~~~~~~mTeYVaTRWY--RAPElll~~~~Yt~aiDiWS  213 (359)
T KOG0660|consen  136 RGLKYIHSANVIHRDLKPSNLLLNADCDLKICDFGLARYLDKFFEDGFMTEYVATRWY--RAPELLLNSSEYTKAIDIWS  213 (359)
T ss_pred             HhcchhhcccccccccchhheeeccCCCEEeccccceeeccccCcccchhcceeeeee--cCHHHHhccccccchhhhhh
Confidence            9999999998       7777       59999998663             347899  99999988888999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         149 VGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      +|||+.||++|++.|.|.+..+++..|.+.+|+|+++
T Consensus       214 vGCI~AEmL~gkplFpG~d~v~Ql~lI~~~lGtP~~e  250 (359)
T KOG0660|consen  214 VGCILAEMLTGKPLFPGKDYVHQLQLILELLGTPSEE  250 (359)
T ss_pred             hhHHHHHHHcCCCCCCCCchHHHHHHHHHhcCCCCHH
Confidence            9999999999999999999999999999999999765

>KOG1026|consensus

Probab=100.00  E-value=3.1e-33  Score=235.24  Aligned_cols=172  Identities=17%  Similarity=0.239  Sum_probs=143.1

Q ss_pred             cccccc-----cC-----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QS-----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~-----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||+||+     ..     ..+++|++|.. +.+.+++|+||++++..++|||||+|+|+|        .+++..++|+||
T Consensus       499 FGkVf~a~~~~l~p~~~~~lVAVK~LKd~a~~~~~~dF~REaeLla~l~H~nIVrLlGVC--------~~~~P~~MvFEY  570 (774)
T KOG1026|consen  499 FGKVFLAEAYGLLPGQDEQLVAVKALKDKAENQARQDFRREAELLAELQHPNIVRLLGVC--------REGDPLCMVFEY  570 (774)
T ss_pred             hhhhhhhhccCCCCCccceehhHhhhcccccHHHHHHHHHHHHHHHhccCCCeEEEEEEE--------ccCCeeEEEEEe
Confidence            899997     11     12346666665 445889999999999999999999999998        457889999999


Q ss_pred             cccccHHHHH----------------------HHHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCc
Q psy7174          74 FTKTTKARFY----------------------SHLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGI  117 (188)
Q Consensus        74 ~~~~~l~~~~----------------------~~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~  117 (188)
                      +..|||.+|+                      .+...++ .||+.||+||-++.              .+.++||+|||+
T Consensus       571 m~~GDL~eFLra~sP~a~~~~~g~~~~~~L~~~q~L~iA-~QIAaGM~YLs~~~FVHRDLATRNCLVge~l~VKIsDfGL  649 (774)
T KOG1026|consen  571 MDHGDLHEFLRARSPKADKLASGQDTPPPLSTSQFLHIA-TQIAAGMEYLSSHHFVHRDLATRNCLVGENLVVKISDFGL  649 (774)
T ss_pred             cccccHHHHHHhhCCccccccCCCCCCCCCCHHHHHHHH-HHHHHHHHHHHhCcccccchhhhhceeccceEEEeccccc
Confidence            9999999972                      2344566 89999999998776              334479999999


Q ss_pred             cccccc-------------ccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         118 GRHVCT-------------LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       118 ~~~~~~-------------~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      ++.+-.             ..+  |+||.+...+ |+.+|||||+||++||+++ |+.|+.+..+.+.++.|.++-..+.
T Consensus       650 sRdiYssDYYk~~~~t~lPIRW--MppEsIly~k-FTteSDVWs~GVvLWEIFsyG~QPy~glSn~EVIe~i~~g~lL~~  726 (774)
T KOG1026|consen  650 SRDIYSSDYYKVRGNTLLPIRW--MPPESILYGK-FTTESDVWSFGVVLWEIFSYGKQPYYGLSNQEVIECIRAGQLLSC  726 (774)
T ss_pred             chhhhhhhhhcccCCceeeeec--CCHHHhhcCc-ccchhhhhhhhhhhhhhhccccCcccccchHHHHHHHHcCCcccC
Confidence            873322             234  8999999877 9999999999999999996 9999999999999999988777999


Q ss_pred             CCCCC
Q psy7174         184 EDTWP  188 (188)
Q Consensus       184 ~~~~p  188 (188)
                      |+.||
T Consensus       727 Pe~CP  731 (774)
T KOG1026|consen  727 PENCP  731 (774)
T ss_pred             CCCCC
Confidence            99998

>KOG0616|consensus

Probab=100.00  E-value=6.8e-33  Score=209.67  Aligned_cols=166  Identities=17%  Similarity=0.245  Sum_probs=142.7

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.|-.     ++.|-++|.+.+-   ..+..++..+|.++|+.+.||+++++++-        ..+...++++|||.+|
T Consensus        57 FGrV~LVr~k~~g~yYAmKvL~k~~vVklKQveH~~nEk~vL~~v~~PFlv~l~~t--------~~d~~~lymvmeyv~G  128 (355)
T KOG0616|consen   57 FGRVHLVREKHSGNYYAMKVLDKQKVVKLKQVEHTHNEKRVLKAVSHPFLVKLYGT--------FKDNSNLYMVMEYVPG  128 (355)
T ss_pred             cceEEEEEEccCCceeehhhcCHHHHHHHHHHHHHhhHHHHHhhccCceeEEEEEe--------eccCCeEEEEEeccCC
Confidence            777775     3445566666662   56677889999999999999999999984        3778899999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      |.+..+        +...++++ +||+.||+|||+.+       |+|+       +||+|||++.        .+||+.|
T Consensus       129 GElFS~Lrk~~rF~e~~arFYA-AeivlAleylH~~~iiYRDLKPENiLlD~~G~iKitDFGFAK~v~~rT~TlCGTPeY  207 (355)
T KOG0616|consen  129 GELFSYLRKSGRFSEPHARFYA-AEIVLALEYLHSLDIIYRDLKPENLLLDQNGHIKITDFGFAKRVSGRTWTLCGTPEY  207 (355)
T ss_pred             ccHHHHHHhcCCCCchhHHHHH-HHHHHHHHHHHhcCeeeccCChHHeeeccCCcEEEEeccceEEecCcEEEecCCccc
Confidence            998876        34577888 89999999999998       8888       5999999865        6799999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                        +|||+++..+ |+.++|+|+|||++|||+.|.+||.++++.++.++|++.--..
T Consensus       208 --LAPEii~sk~-ynkavDWWalGVLIYEMlaG~pPF~~~~~~~iY~KI~~~~v~f  260 (355)
T KOG0616|consen  208 --LAPEIIQSKG-YNKAVDWWALGVLIYEMLAGYPPFYDDNPIQIYEKILEGKVKF  260 (355)
T ss_pred             --cChHHhhcCC-CCcchhHHHHHHHHHHHHcCCCCCcCCChHHHHHHHHhCcccC
Confidence              9999998866 9999999999999999999999999999999999998764433

>KOG0658|consensus

Probab=100.00  E-value=3.7e-34  Score=221.66  Aligned_cols=176  Identities=28%  Similarity=0.473  Sum_probs=141.5

Q ss_pred             ccccccc--cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           4 VCFKPFQ--QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         4 ~~g~v~~--~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      .||+||+  .......+||||...+ .+--.+|+++|++++|||||++.-+|..+.   ..+.....+||||++....+.
T Consensus        36 sFg~Vyq~~~~e~~~~vAIKKv~~d-~r~knrEl~im~~l~HpNIV~L~~~f~~~~---~~d~~~lnlVleymP~tL~~~  111 (364)
T KOG0658|consen   36 SFGVVYQAKLRETEEEVAIKKVLQD-KRYKNRELQIMRKLDHPNIVRLLYFFSSST---ESDEVYLNLVLEYMPETLYRV  111 (364)
T ss_pred             ccceEEEEEEcCCCceeEEEEecCC-CCcCcHHHHHHHhcCCcCeeeEEEEEEecC---CCchhHHHHHHHhchHHHHHH
Confidence            5999999  1222336667774222 234468999999999999999998874432   123456789999998766554


Q ss_pred             HH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------cccccc
Q psy7174          82 FY-----------SHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLY  125 (188)
Q Consensus        82 ~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~  125 (188)
                      ..           -.++.+. +|+.+||.|||+.+       |.|+        |||||||.++          ...|..
T Consensus       112 ~r~~~~~~~~mp~~~iKLYt-~Qlfrgl~yLh~~~IcHRDIKPqNlLvD~~tg~LKicDFGSAK~L~~~epniSYicSRy  190 (364)
T KOG0658|consen  112 IRHYTRANQRMPLLEIKLYT-YQLFRGLAYLHSHGICHRDIKPQNLLVDPDTGVLKICDFGSAKVLVKGEPNISYICSRY  190 (364)
T ss_pred             HHHHhhcCCCCceeeeHHHH-HHHHHHHHHHHhcCcccCCCChheEEEcCCCCeEEeccCCcceeeccCCCceeEEEecc
Confidence            32           2477788 89999999999988       6666        6999999865          456788


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                      |  +|||++.+...|+.+.||||.||++.||+.|++.|.|++..+++..|++.+|+|..++
T Consensus       191 Y--RaPELifga~~Yt~~IDiWSaGCV~aELl~g~plFpG~s~~dQL~eIik~lG~Pt~e~  249 (364)
T KOG0658|consen  191 Y--RAPELIFGATEYTTSIDIWSAGCVMAELLKGQPLFPGDSSVDQLVEIIKVLGTPTRED  249 (364)
T ss_pred             c--cCHHHHcCccccCceeEEhhhhHHHHHHhcCCcccCCCCHHHHHHHHHHHhCCCCHHH
Confidence            9  9999999988899999999999999999999999999999999999999999998653

>KOG0581|consensus

Probab=100.00  E-value=7e-33  Score=214.89  Aligned_cols=162  Identities=20%  Similarity=0.220  Sum_probs=130.7

Q ss_pred             cccccc-cCCccc-ccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCC-ccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTS-SDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~-~~~iv~e~~~~~   77 (188)
                      -|.|++ .++... +.|+|..    .....+++.+|+++++.++|||||.+||+|+        ++. ...++||||.+|
T Consensus        92 gG~V~kv~Hk~t~~i~AlK~I~~~~~~~~~~Qi~rEl~il~~~~spyIV~~ygaF~--------~~~~~isI~mEYMDgG  163 (364)
T KOG0581|consen   92 GGTVYKVRHKPTGKIYALKVILLNIDPALQKQILRELEILRSCQSPYIVGFYGAFY--------SNGEEISICMEYMDGG  163 (364)
T ss_pred             CcEEEEEEEcCCCeEEEEEeecccCCHHHHHHHHHHHHHHhhCCCCCeeeEeEEEE--------eCCceEEeehhhcCCC
Confidence            367777 334332 5555543    5667788999999999999999999999873        344 599999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhh-cC-------CCCe-------EEEecCCccc---------cccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKS-SM-------PALL-------KKFVGIGIGR---------HVCTLY  125 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~---------~~~~~~  125 (188)
                      +|+.+        +..+..+. .++++||.|||+ .+       |+|+       +||||||.+.         ++||..
T Consensus       164 SLd~~~k~~g~i~E~~L~~ia-~~VL~GL~YLh~~~~IIHRDIKPsNlLvNskGeVKicDFGVS~~lvnS~a~tfvGT~~  242 (364)
T KOG0581|consen  164 SLDDILKRVGRIPEPVLGKIA-RAVLRGLSYLHEERKIIHRDIKPSNLLVNSKGEVKICDFGVSGILVNSIANTFVGTSA  242 (364)
T ss_pred             CHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhccCeeeccCCHHHeeeccCCCEEeccccccHHhhhhhccccccccc
Confidence            99986        34566777 899999999997 44       8888       5999999743         789999


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC-----ChHHHHHHHHhh
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE-----SDLDQLTRIFQT  178 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-----~~~~~~~~i~~~  178 (188)
                      |  ||||.+.+.. |+.++||||||++++|+++|+.||...     +..+.+..|+..
T Consensus       243 Y--MsPERi~g~~-Ys~~sDIWSLGLsllE~a~GrfP~~~~~~~~~~~~~Ll~~Iv~~  297 (364)
T KOG0581|consen  243 Y--MSPERISGES-YSVKSDIWSLGLSLLELAIGRFPYPPPNPPYLDIFELLCAIVDE  297 (364)
T ss_pred             c--cChhhhcCCc-CCcccceecccHHHHHHhhCCCCCCCcCCCCCCHHHHHHHHhcC
Confidence            9  9999999876 999999999999999999999999774     445555566543

>KOG0597|consensus

Probab=100.00  E-value=8.9e-33  Score=224.17  Aligned_cols=167  Identities=20%  Similarity=0.291  Sum_probs=137.9

Q ss_pred             cccccc-cCCccc-ccccc---cc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMA---RC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~---~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ ..|+.. ++|+|   |+  ..++.+.+.+|++|++.++|||||.++++|        ....+.|+|.||+.+ 
T Consensus        15 fg~VYKgrrK~t~~~vAik~i~K~gr~~k~l~~l~~ev~i~r~lkHpniv~m~esf--------Et~~~~~vVte~a~g-   85 (808)
T KOG0597|consen   15 FGRVYKGRRKYTIQVVAIKFIDKSGRNEKELKNLRQEVRILRSLKHPNIVEMLESF--------ETSAHLWVVTEYAVG-   85 (808)
T ss_pred             cceeeecccccceeEEEEEEehhcCCchHHHHHHHHHHHHHHhcCCcchhhHHHhh--------cccceEEEEehhhhh-
Confidence            899999 555554 44444   44  445667799999999999999999999975        567899999999988 


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      +|..+        ++.++.+. .|++.||.|||+.+       |.||       +|++|||+++           ..||+
T Consensus        86 ~L~~il~~d~~lpEe~v~~~a-~~LVsaL~yLhs~rilhrd~kPqniLl~~~~~~KlcdFg~Ar~m~~~t~vltsikGtP  164 (808)
T KOG0597|consen   86 DLFTILEQDGKLPEEQVRAIA-YDLVSALYYLHSNRILHRDMKPQNILLEKGGTLKLCDFGLARAMSTNTSVLTSIKGTP  164 (808)
T ss_pred             hHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHhcCcccccCCcceeeecCCCceeechhhhhhhcccCceeeeeccCcc
Confidence            77665        46677888 89999999999998       7777       5999999854           56899


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      .|  ||||++.+.+ |+..+|.||+|||+||+..|+|||...+-.+....|...-..|++
T Consensus       165 lY--mAPElv~e~p-yd~~sDlWslGcilYE~~~G~PPF~a~si~~Lv~~I~~d~v~~p~  221 (808)
T KOG0597|consen  165 LY--MAPELVEEQP-YDHTSDLWSLGCILYELYVGQPPFYARSITQLVKSILKDPVKPPS  221 (808)
T ss_pred             cc--cCHHHHcCCC-ccchhhHHHHHHHHHHHhcCCCCchHHHHHHHHHHHhcCCCCCcc
Confidence            99  9999998766 999999999999999999999999988877777777665444443

>KOG0192|consensus

Probab=99.98  E-value=1.8e-31  Score=213.38  Aligned_cols=173  Identities=19%  Similarity=0.203  Sum_probs=132.3

Q ss_pred             cccccc---cCCc-ccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCC-ccEEEEeccccc
Q psy7174           5 CFKPFQ---QSKW-SPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTS-SDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~---~~~~-~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~-~~~iv~e~~~~~   77 (188)
                      ||.||+   .+.. +++|.+...  +....+.+.+|+.+|++++|||||+|+|+|..        .. ..++||||+++|
T Consensus        54 ~g~V~~~~~~g~~~vavK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~f~G~~~~--------~~~~~~iVtEy~~~G  125 (362)
T KOG0192|consen   54 FGTVYKGKWRGTDVVAVKIISDPDFDDESRKAFRREASLLSRLRHPNIVQFYGACTS--------PPGSLCIVTEYMPGG  125 (362)
T ss_pred             ceeEEEEEeCCceeEEEEEecchhcChHHHHHHHHHHHHHHhCCCCCeeeEEEEEcC--------CCCceEEEEEeCCCC
Confidence            678887   2222 345555553  22336789999999999999999999999732        22 689999999999


Q ss_pred             cHHHHHH----------HHHHHHHHHHHHHHHHHhhcCC--------CC--------eEEEecCCccc-----------c
Q psy7174          78 TKARFYS----------HLRYLENQQILEGLQALKSSMP--------AL--------LKKFVGIGIGR-----------H  120 (188)
Q Consensus        78 ~l~~~~~----------~~~~~~~~qi~~gl~~lH~~~~--------~~--------ilkl~dfg~~~-----------~  120 (188)
                      +|..+..          .+..++ .||+.||+|||+++|        .|        .+||+|||+++           .
T Consensus       126 sL~~~l~~~~~~~l~~~~~l~~a-ldiArGm~YLH~~~~iIHrDLK~~NiLv~~~~~~~KI~DFGlsr~~~~~~~~~~~~  204 (362)
T KOG0192|consen  126 SLSVLLHKKRKRKLPLKVRLRIA-LDIARGMEYLHSEGPIIHRDLKSDNILVDLKGKTLKIADFGLSREKVISKTSMTSV  204 (362)
T ss_pred             cHHHHHhhcccCCCCHHHHHHHH-HHHHHHHHHHhcCCCeeecccChhhEEEcCCCCEEEECCCccceeeccccccccCC
Confidence            9998742          233344 599999999999983        22        47999999864           3


Q ss_pred             cccccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH-hhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF-QTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~-~~~~~p~~~~~p  188 (188)
                      .||..|  ||||++.+. ..|+.++||||||+++||+++|+.||.+..+.+....+. ...+++.|..+|
T Consensus       205 ~GT~~w--MAPEv~~~~~~~~~~K~DvySFgIvlWEl~t~~~Pf~~~~~~~~~~~v~~~~~Rp~~p~~~~  272 (362)
T KOG0192|consen  205 AGTYRW--MAPEVLRGEKSPYTEKSDVYSFGIVLWELLTGEIPFEDLAPVQVASAVVVGGLRPPIPKECP  272 (362)
T ss_pred             CCCccc--cChhhhcCCCCcCCccchhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhcCCCCCCCccCC
Confidence            678889  999999842 349999999999999999999999999998877766665 444444465444

>KOG0694|consensus

Probab=99.98  E-value=2.9e-32  Score=224.94  Aligned_cols=161  Identities=16%  Similarity=0.236  Sum_probs=141.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||+|+.     ++.+-+||++||-   ..++.+..+.|.+|++... ||.+++++++|        +...++|.||||+.
T Consensus       381 FGkV~lae~k~~~e~yAIK~LKK~~Il~~d~Ve~~~~EkrI~~la~~HPFL~~L~~~f--------QT~~~l~fvmey~~  452 (694)
T KOG0694|consen  381 FGKVLLAELKGTNEYYAIKVLKKGDILQRDEVESLMCEKRIFELANRHPFLVNLFSCF--------QTKEHLFFVMEYVA  452 (694)
T ss_pred             CceEEEEEEcCCCcEEEEEEeeccceeccccHHHHHHHHHHHHHhccCCeEeeccccc--------ccCCeEEEEEEecC
Confidence            899986     5667789999993   5677889999999999886 99999999965        78899999999999


Q ss_pred             cccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc-----------cccccc
Q psy7174          76 KTTKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI-----------GRHVCT  123 (188)
Q Consensus        76 ~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~-----------~~~~~~  123 (188)
                      ||++..+       +...+++. +.|+.||.|||+++       .+||       +||+|||+           ++++||
T Consensus       453 Ggdm~~~~~~~~F~e~rarfya-Aev~l~L~fLH~~~IIYRDlKLdNiLLD~eGh~kiADFGlcKe~m~~g~~TsTfCGT  531 (694)
T KOG0694|consen  453 GGDLMHHIHTDVFSEPRARFYA-AEVVLGLQFLHENGIIYRDLKLDNLLLDTEGHVKIADFGLCKEGMGQGDRTSTFCGT  531 (694)
T ss_pred             CCcEEEEEecccccHHHHHHHH-HHHHHHHHHHHhcCceeeecchhheEEcccCcEEecccccccccCCCCCccccccCC
Confidence            9995442       56677888 89999999999999       4455       59999997           448999


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.|  +|||++.+.. |+..+|+|||||++|||+.|++||.|++..+.+..|..
T Consensus       532 pey--~aPEil~e~~-Yt~aVDWW~lGVLlyeML~Gq~PF~gddEee~FdsI~~  582 (694)
T KOG0694|consen  532 PEF--LAPEVLTEQS-YTRAVDWWGLGVLLYEMLVGESPFPGDDEEEVFDSIVN  582 (694)
T ss_pred             hhh--cChhhhccCc-ccchhhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence            999  9999999876 99999999999999999999999999999999988864

>KOG0605|consensus

Probab=99.97  E-value=2.7e-31  Score=214.03  Aligned_cols=162  Identities=18%  Similarity=0.258  Sum_probs=142.5

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.|+.     ++++-++|.++|.   ..+..++.+.|-.+|...++|+||+++-.|        ++...+|++|||++|
T Consensus       154 fGeVrLarKk~Tg~iyAmK~LkKS~M~~~~Qv~hV~aERdiL~~~ds~~vVKLyYsF--------QD~~~LYLiMEylPG  225 (550)
T KOG0605|consen  154 FGEVRLARKKDTGEIYAMKILKKSEMLKKNQVEHVRAERDILAEVDSPWVVKLYYSF--------QDKEYLYLIMEYLPG  225 (550)
T ss_pred             ceeEEEEEEccCCcEEeeecccHHHHHhhhhHHHHHHHHHHhhhcCCCcEEEEEEEe--------cCCCeeEEEEEecCC
Confidence            788886     5566677777775   456678899999999999999999999854        888999999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+...+        ++..++++ .+.+.|++-+|+.|       |+|+       +||+|||++.               
T Consensus       226 GD~mTLL~~~~~L~e~~arfYi-aE~vlAI~~iH~~gyIHRDIKPdNlLiD~~GHiKLSDFGLs~gl~~~~~~~~~~~~~  304 (550)
T KOG0605|consen  226 GDMMTLLMRKDTLTEDWARFYI-AETVLAIESIHQLGYIHRDIKPDNLLIDAKGHIKLSDFGLSTGLDKKHRIESYRLDE  304 (550)
T ss_pred             ccHHHHHHhcCcCchHHHHHHH-HHHHHHHHHHHHcCcccccCChhheeecCCCCEeeccccccchhhhhhhhhhhcchh
Confidence            999876        56788888 89999999999999       8887       4999999621               


Q ss_pred             -------------------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         120 -------------------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       120 -------------------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                                                                 .+||+-|  +|||++.+.. |+..+|+||||||+|||
T Consensus       305 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~w~~nrr~~a~StVGTPDY--iAPEVll~kg-Y~~~cDwWSLG~ImyEm  381 (550)
T KOG0605|consen  305 QMQINLSEAKPSDFPKFNTPRSTMSRREQLQTWKRNRRQLAYSTVGTPDY--IAPEVLLGKG-YGKECDWWSLGCIMYEM  381 (550)
T ss_pred             hhhhhhccCCCccccccccccchhhHHHHHHHHHhhhhhhhhcccCCccc--cchHHHhcCC-CCccccHHHHHHHHHHH
Confidence                                                       5789999  9999999976 99999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHhh
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +.|.|||.+.++.++..+|..+
T Consensus       382 LvGyPPF~s~tp~~T~rkI~nw  403 (550)
T KOG0605|consen  382 LVGYPPFCSETPQETYRKIVNW  403 (550)
T ss_pred             HhCCCCCCCCCHHHHHHHHHHH
Confidence            9999999999999999999764

>KOG0033|consensus

Probab=99.97  E-value=4.9e-31  Score=195.53  Aligned_cols=153  Identities=24%  Similarity=0.243  Sum_probs=132.1

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQIL   95 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~   95 (188)
                      +....+++.+|++|.+.|+||||+++.+-        ..++...++|+|++.|+++..-        +.....++ +||+
T Consensus        50 ~~~~~e~l~rEarIC~~LqHP~IvrL~~t--------i~~~~~~ylvFe~m~G~dl~~eIV~R~~ySEa~aSH~~-rQiL  120 (355)
T KOG0033|consen   50 SARDFQKLEREARICRKLQHPNIVRLHDS--------IQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCI-QQIL  120 (355)
T ss_pred             ccccHHHHHHHHHHHHhcCCCcEeehhhh--------hcccceeEEEEecccchHHHHHHHHHHHHHHHHHHHHH-HHHH
Confidence            44567889999999999999999999984        3667889999999999998652        33455566 8999


Q ss_pred             HHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          96 EGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ++|.|+|.++       |.|+          +|++|||++.          +.||+.|  +|||++...+ |+..+|||+
T Consensus       121 eal~yCH~n~IvHRDvkP~nllLASK~~~A~vKL~~FGvAi~l~~g~~~~G~~GtP~f--maPEvvrkdp-y~kpvDiW~  197 (355)
T KOG0033|consen  121 EALAYCHSNGIVHRDLKPENLLLASKAKGAAVKLADFGLAIEVNDGEAWHGFAGTPGY--LSPEVLKKDP-YSKPVDIWA  197 (355)
T ss_pred             HHHHHHHhcCceeccCChhheeeeeccCCCceeecccceEEEeCCccccccccCCCcc--cCHHHhhcCC-CCCcchhhh
Confidence            9999999998       7776          5999999753          6789999  9999999887 999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         149 VGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|+|+|-++.|.+||.+.+....+++|.+.--.-++.+||
T Consensus       198 cGViLfiLL~G~~PF~~~~~~rlye~I~~g~yd~~~~~w~  237 (355)
T KOG0033|consen  198 CGVILYILLVGYPPFWDEDQHRLYEQIKAGAYDYPSPEWD  237 (355)
T ss_pred             hhHHHHHHHhCCCCCCCccHHHHHHHHhccccCCCCcccC
Confidence            9999999999999999999999999998876666666686

>KOG0667|consensus

Probab=99.97  E-value=1.8e-30  Score=213.38  Aligned_cols=167  Identities=27%  Similarity=0.430  Sum_probs=138.7

Q ss_pred             cccccc-----cCCccccccccccchhhhhHHHHHHHHHHhCC-CC-----CeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLD-YA-----NIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~-h~-----niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.|.+     ++..++||.||+ ......+...|+++|..|+ |.     |+|+++++|++        ..+.|+|+|.
T Consensus       199 FGQVvk~~d~~T~e~VAIKIiKN-~k~f~~Q~~~Ei~iL~~ln~~d~~~~~n~Vrm~d~F~f--------r~HlciVfEL  269 (586)
T KOG0667|consen  199 FGQVVKAYDHKTGEIVAIKIIKN-KKRFLRQAQIEIRILELLNKHDPDDKYNIVRMLDYFYF--------RNHLCIVFEL  269 (586)
T ss_pred             cceeEEEEecCCCcEEEEEeecc-ChHHHHHHHHHHHHHHHHhccCCCCCeeEEEeeecccc--------ccceeeeehh
Confidence            788888     334445554443 3445567788999999998 43     89999998744        6799999998


Q ss_pred             cccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc--------
Q psy7174          74 FTKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR--------  119 (188)
Q Consensus        74 ~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~--------  119 (188)
                      +. .+|.++          ...++.+. .||++||.+||..+       |+||         +||+|||.+.        
T Consensus       270 L~-~NLYellK~n~f~Glsl~~ir~~~-~Qil~~L~~L~~l~IIHcDLKPENILL~~~~r~~vKVIDFGSSc~~~q~vyt  347 (586)
T KOG0667|consen  270 LS-TNLYELLKNNKFRGLSLPLVRKFA-QQILTALLFLHELGIIHCDLKPENILLKDPKRSRIKVIDFGSSCFESQRVYT  347 (586)
T ss_pred             hh-hhHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeccCChhheeeccCCcCceeEEecccccccCCccee
Confidence            84 444444          45688888 89999999999988       8888         4999999865        


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .+.+..|  +|||++++.+ |+.+.||||||||+.||.+|.|.|+|.+..+++.+|.+.+|.|++.
T Consensus       348 YiQSRfY--RAPEVILGlp-Y~~~IDmWSLGCIlAEL~tG~PLfpG~ne~DQl~~I~e~lG~Pp~~  410 (586)
T KOG0667|consen  348 YIQSRFY--RAPEVILGLP-YDTAIDMWSLGCILAELFTGEPLFPGDNEYDQLARIIEVLGLPPPK  410 (586)
T ss_pred             eeecccc--ccchhhccCC-CCCccceeehhhhHHhHhcCccccCCCCHHHHHHHHHHHhCCCCHH
Confidence            4567889  9999999987 9999999999999999999999999999999999999999988864

>KOG0662|consensus

Probab=99.97  E-value=3.2e-30  Score=183.75  Aligned_cols=172  Identities=33%  Similarity=0.546  Sum_probs=144.7

Q ss_pred             cccccc-cCCccc-ccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|.||+ .++... ++++|+.     +.....++.|||-+|+.++|.|||+++++.        ..+..+-+|+|+|.. 
T Consensus        15 ygtvfkarn~~t~eivalkrvrlddddegvpssalreicllkelkhknivrl~dvl--------hsdkkltlvfe~cdq-   85 (292)
T KOG0662|consen   15 YGTVFKARNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL--------HSDKKLTLVFEFCDQ-   85 (292)
T ss_pred             ceeeEecccCCccceEEEEEEeccCCCCCCcHHHHHHHHHHHHhhhcceeehhhhh--------ccCceeEEeHHHhhH-
Confidence            789999 555555 8889884     233456799999999999999999999974        456788999999954 


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-----------cc
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-----------CT  123 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-----------~~  123 (188)
                      ++.++         .+.++.++ -|++.||.++|+++       |.|+       +|++|||+++..           -|
T Consensus        86 dlkkyfdslng~~d~~~~rsfm-lqllrgl~fchshnvlhrdlkpqnllin~ngelkladfglarafgipvrcysaevvt  164 (292)
T KOG0662|consen   86 DLKKYFDSLNGDLDPEIVRSFM-LQLLRGLGFCHSHNVLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVVT  164 (292)
T ss_pred             HHHHHHHhcCCcCCHHHHHHHH-HHHHhhhhhhhhhhhhhccCCcceEEeccCCcEEecccchhhhcCCceEeeeceeee
Confidence            33333         23466677 79999999999988       6666       699999997743           36


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHH-hCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~-~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .||  ++|.++.+.+-|+...|+||.|||+.|+. .|+|.|+|.+-.+++.+|+..++.|..++||
T Consensus       165 lwy--rppdvlfgakly~tsidmwsagcifaelanagrplfpg~dvddqlkrif~~lg~p~ed~wp  228 (292)
T KOG0662|consen  165 LWY--RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEDQWP  228 (292)
T ss_pred             eec--cCcceeeeeehhccchHhhhcchHHHHHhhcCCCCCCCCcHHHHHHHHHHHhCCCccccCC
Confidence            799  99999998888999999999999999998 5899999999999999999999999999998

>KOG0610|consensus

Probab=99.97  E-value=1.2e-29  Score=199.22  Aligned_cols=162  Identities=17%  Similarity=0.177  Sum_probs=137.5

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      .|.||.     ++.+.++|.+-|.   ..+...+++.|.+||+.++||.+..+|+.|        ..+...|++||||+|
T Consensus        90 iG~VyL~~l~~t~~~fAmKVmdK~~l~~rkKl~Ra~tE~eIL~~lDHPFlPTLYa~f--------et~~~~cl~meyCpG  161 (459)
T KOG0610|consen   90 IGTVYLVELRGTNCLFAMKVMDKESLASRKKLKRAQTEREILSLLDHPFLPTLYASF--------ETDKYSCLVMEYCPG  161 (459)
T ss_pred             ceeEEEEEecCCCceEEEEEecHHHHhhhhHHHHHHHHHHHHHhcCCCccchhhhee--------eccceeEEEEecCCC
Confidence            478886     4467777777773   455667788899999999999999999965        667889999999999


Q ss_pred             ccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCeE-------EEecCCcc--------------
Q psy7174          77 TTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALLK-------KFVGIGIG--------------  118 (188)
Q Consensus        77 ~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~il-------kl~dfg~~--------------  118 (188)
                      |+|..+          ++.+++++ ++++.||+|||..|       |+|||       -++||.++              
T Consensus       162 GdL~~LrqkQp~~~fse~~aRFYa-AEvl~ALEYLHmlGivYRDLKPENILvredGHIMLsDFDLS~~~~~~Pt~~~s~~  240 (459)
T KOG0610|consen  162 GDLHSLRQKQPGKRFSESAARFYA-AEVLLALEYLHMLGIVYRDLKPENILVREDGHIMLSDFDLSLRCPVSPTLVKSSS  240 (459)
T ss_pred             ccHHHHHhhCCCCccchhhHHHHH-HHHHHHHHHHHhhceeeccCCcceeEEecCCcEEeeeccccccCCCCCeeeccCC
Confidence            999886          56788888 89999999999999       88884       56666530              


Q ss_pred             -----------------------------------------------------cccccccccCCCCccccccCCCCchhH
Q psy7174         119 -----------------------------------------------------RHVCTLYCTRGAPELLFGARMYGVGID  145 (188)
Q Consensus       119 -----------------------------------------------------~~~~~~~y~~~aPe~~~~~~~~~~~~D  145 (188)
                                                                           +++||..|  +|||++.+.. ++.++|
T Consensus       241 ~~~~~~~~~~~~~~~s~f~~r~~~~~~~~~k~~~~~~~~~p~~~aep~~~RSnSFVGThEY--lAPEvI~G~G-HgsAVD  317 (459)
T KOG0610|consen  241 PRSSGSQPSCRSRQPSCFSPRCLSSSKKRKKKDESASRSLPELVAEPTGARSNSFVGTHEY--LAPEVIRGEG-HGSAVD  317 (459)
T ss_pred             CCCCCCCcccccccccccccchhccccccccccccccccchhhhcCCCCcccccccccccc--ccceeeecCC-CCchhh
Confidence                                                                 15678889  9999999976 999999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         146 MWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       146 iwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +|+|||.+|||+.|..||.|.++.+++.+|+..
T Consensus       318 WWtfGIflYEmLyG~TPFKG~~~~~Tl~NIv~~  350 (459)
T KOG0610|consen  318 WWTFGIFLYEMLYGTTPFKGSNNKETLRNIVGQ  350 (459)
T ss_pred             HHHHHHHHHHHHhCCCCcCCCCchhhHHHHhcC
Confidence            999999999999999999999999999999753

>KOG0583|consensus

Probab=99.97  E-value=1.8e-29  Score=203.02  Aligned_cols=163  Identities=21%  Similarity=0.231  Sum_probs=130.4

Q ss_pred             cccccc-----cCCcccccccccc----ch-hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC----DV-NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~----~~-~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||+|+.     ++..+++|.+.+.    .. ...+.+.+|+.++++++ ||||+++++++        ......++||||
T Consensus        30 fgkV~~a~~~~t~~~vAiKii~~~~~~~~~~~~~~~i~rEi~~~~~~~~HpnI~~l~ev~--------~t~~~~~ivmEy  101 (370)
T KOG0583|consen   30 FGKVKLAKHRLTGEKVAIKIIDRKKVSSKSQKLDELIKREISILRRLRSHPNIIRLLEVF--------ATPTKIYIVMEY  101 (370)
T ss_pred             CeeEEEeeeccCCCeEEEEEechhcccccccccchhhHHHHHHHHHhccCCCEeEEEEEE--------ecCCeEEEEEEe
Confidence            777876     2233445554442    11 34567789999999999 99999999986        334559999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc-----------
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR-----------  119 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~-----------  119 (188)
                      +.+|+|...        +...+.++ +|++.|++|||+.+       |+|+        +||+|||++.           
T Consensus       102 ~~gGdL~~~i~~~g~l~E~~ar~~F-~Qlisav~y~H~~gi~HRDLK~ENilld~~~~~~Kl~DFG~s~~~~~~~~~l~t  180 (370)
T KOG0583|consen  102 CSGGDLFDYIVNKGRLKEDEARKYF-RQLISAVAYCHSRGIVHRDLKPENILLDGNEGNLKLSDFGLSAISPGEDGLLKT  180 (370)
T ss_pred             cCCccHHHHHHHcCCCChHHHHHHH-HHHHHHHHHHHhCCEeeCCCCHHHEEecCCCCCEEEeccccccccCCCCCcccC
Confidence            999998875        45677788 89999999999998       3443        7999999754           


Q ss_pred             ccccccccCCCCccccccCCC-CchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         120 HVCTLYCTRGAPELLFGARMY-GVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~-~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .+||+.|  +|||++.+...| +.++||||+|+++|.|++|..||...+.......|.+.
T Consensus       181 ~cGsp~Y--~aPEvl~~~~~Y~g~~aDvWS~GViLy~ml~G~~PF~d~~~~~l~~ki~~~  238 (370)
T KOG0583|consen  181 FCGSPAY--AAPEVLSGKGTYSGKAADVWSLGVILYVLLCGRLPFDDSNVPNLYRKIRKG  238 (370)
T ss_pred             CCCCccc--CCHHHhCCCCCcCCchhhhhhhHHHHHHHHhCCCCCCCccHHHHHHHHhcC
Confidence            5689999  999999885525 58999999999999999999999998888888776554

>cd07871 STKc_PCTAIRE3 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-3 kinase

Probab=99.96  E-value=2.6e-29  Score=196.33  Aligned_cols=172  Identities=27%  Similarity=0.496  Sum_probs=135.0

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.++.. .......+.+|++++++++||||+++++++        .++...++++||+.+ +
T Consensus        18 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~-~   88 (288)
T cd07871          18 YATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKNLKHANIVTLHDII--------HTERCLTLVFEYLDS-D   88 (288)
T ss_pred             CEEEEEEEECCCCCEEEEEEecccccCCcchhHHHHHHHHHhCCCCCEeeEEEEE--------cCCCeEEEEEeCCCc-C
Confidence            677887 2    223334444332 223345678999999999999999999975        345678999999986 5


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          79 KARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        79 l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      +..+         ...+..++ .|+++||.|||+++       |+|+       +|++|||++.           ..++.
T Consensus        89 l~~~l~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivH~dlkp~Nil~~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~  167 (288)
T cd07871          89 LKQYLDNCGNLMSMHNVKIFM-FQLLRGLSYCHKRKILHRDLKPQNLLINEKGELKLADFGLARAKSVPTKTYSNEVVTL  167 (288)
T ss_pred             HHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEECcCcceeeccCCCccccCceecc
Confidence            5543         23456666 89999999999988       5555       6999999753           34577


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.+...++.++|+||+||++|+|++|++||.+.+..+.+..+.+..+.|+++.||
T Consensus       168 ~y--~aPE~~~~~~~~~~~~DiwslG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  229 (288)
T cd07871         168 WY--RPPDVLLGSTEYSTPIDMWGVGCILYEMATGRPMFPGSTVKEELHLIFRLLGTPTEETWP  229 (288)
T ss_pred             cc--cChHHhcCCcccCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHhh
Confidence            89  999998764458999999999999999999999999999999999999999998888776

Serine/Threonine Kinases (STKs), PCTAIRE-3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-3 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-3 shows a restricted pattern of expression and is present in brain, kidney, and intestine. It is elevated in Alzheimer's disease (AD) and has been shown to associate with paired helical filament

>KOG0589|consensus

Probab=99.96  E-value=1.5e-29  Score=202.83  Aligned_cols=171  Identities=19%  Similarity=0.195  Sum_probs=138.8

Q ss_pred             cccccc-cCCc-ccccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCc-cEEEEecccc
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSS-DYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~-~~iv~e~~~~   76 (188)
                      ||..+. .++. ....++|+.     +...+..+.+|+.++++++|||||.+++.|        ..+.. .+|+|+||.|
T Consensus        17 fG~a~lvrhk~~~~~~vlK~I~l~~~t~~~r~~A~~E~~lis~~~hP~iv~y~ds~--------~~~~~~l~Ivm~Y~eG   88 (426)
T KOG0589|consen   17 FGSALLVRHKSDDKLYVLKKINLEKLTEPERRSAIQEMDLLSKLLHPNIVEYKDSF--------EEDGQLLCIVMEYCEG   88 (426)
T ss_pred             cchhhhhhhccCCceEEEEEEeccccCchhhHHHHHHHHHHHhccCCCeeeeccch--------hcCCceEEEEEeecCC
Confidence            677776 2332 224445552     344556789999999999999999999976        33445 8999999999


Q ss_pred             ccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCccc-----------cc
Q psy7174          77 TTKARF----------YSHLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGR-----------HV  121 (188)
Q Consensus        77 ~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~-----------~~  121 (188)
                      |++.+.          ++.+..++ -|++.|+.|||+++              .++.+|+.|||+++           .+
T Consensus        89 g~l~~~i~~~k~~~f~E~~i~~~~-~Q~~~av~ylH~~~iLHRDlK~~Nifltk~~~VkLgDfGlaK~l~~~~~~a~tvv  167 (426)
T KOG0589|consen   89 GDLAQLIKEQKGVLFPEERILKWF-VQILLAVNYLHENRVLHRDLKCANIFLTKDKKVKLGDFGLAKILNPEDSLASTVV  167 (426)
T ss_pred             CCHHHHHHHHhhccccHHHHHHHH-HHHHHHHHHHHhhhhhcccchhhhhhccccCceeecchhhhhhcCCchhhhheec
Confidence            999885          34455555 49999999999776              23336999999854           67


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      ||+.|  ++||.+.+.+ |+.|+|||||||.+|||++-+++|.+.+......+|.+....|.|..+
T Consensus       168 GTp~Y--mcPEil~d~p-Yn~KSDiWsLGC~~yEm~~lk~aF~a~~m~~Li~ki~~~~~~Plp~~y  230 (426)
T KOG0589|consen  168 GTPYY--MCPEILSDIP-YNEKSDIWSLGCCLYEMCTLKPAFKASNMSELILKINRGLYSPLPSMY  230 (426)
T ss_pred             CCCcc--cCHHHhCCCC-CCccCcchhhcchHHHHHhcccccCccchHHHHHHHhhccCCCCCccc
Confidence            89999  9999999977 999999999999999999999999999999999999999888888765

>KOG4721|consensus

Probab=99.96  E-value=2.8e-30  Score=210.05  Aligned_cols=145  Identities=20%  Similarity=0.291  Sum_probs=115.3

Q ss_pred             HHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHHHHHhh
Q psy7174          32 KAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGLQALKS  103 (188)
Q Consensus        32 ~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~  103 (188)
                      ..+|+.|++|+|||||.|.|+|..        ..-.||+||||+.|.|..++        ..+..+. ++|+.||.|||.
T Consensus       160 ETdIKHLRkLkH~NII~FkGVCtq--------sPcyCIiMEfCa~GqL~~VLka~~~itp~llv~Ws-k~IA~GM~YLH~  230 (904)
T KOG4721|consen  160 ETDIKHLRKLKHPNIITFKGVCTQ--------SPCYCIIMEFCAQGQLYEVLKAGRPITPSLLVDWS-KGIAGGMNYLHL  230 (904)
T ss_pred             hhhHHHHHhccCcceeeEeeeecC--------CceeEEeeeccccccHHHHHhccCccCHHHHHHHH-HHhhhhhHHHHH
Confidence            358889999999999999999832        34579999999999999863        2344455 799999999999


Q ss_pred             cC--------CCCe------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC
Q psy7174         104 SM--------PALL------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK  159 (188)
Q Consensus       104 ~~--------~~~i------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g  159 (188)
                      +.        |+.+      +||+|||.++          +.||-.+  ||||++.+.+ .+.|+|||||||+||||+||
T Consensus       231 hKIIHRDLKSPNiLIs~~d~VKIsDFGTS~e~~~~STkMSFaGTVaW--MAPEvIrneP-csEKVDIwSfGVVLWEmLT~  307 (904)
T KOG4721|consen  231 HKIIHRDLKSPNILISYDDVVKISDFGTSKELSDKSTKMSFAGTVAW--MAPEVIRNEP-CSEKVDIWSFGVVLWEMLTG  307 (904)
T ss_pred             hhHhhhccCCCceEeeccceEEeccccchHhhhhhhhhhhhhhhHhh--hCHHHhhcCC-cccccceehhHHHHHHHHhc
Confidence            87        3332      6999999754          7789899  9999999977 89999999999999999999


Q ss_pred             CCCCCCCChHHHHHHH-HhhcCCCCCCCCC
Q psy7174         160 APFLPGESDLDQLTRI-FQTLGTPSEDTWP  188 (188)
Q Consensus       160 ~~pf~~~~~~~~~~~i-~~~~~~p~~~~~p  188 (188)
                      ..||..-+...++--+ ...+..|.|..||
T Consensus       308 EiPYkdVdssAIIwGVGsNsL~LpvPstcP  337 (904)
T KOG4721|consen  308 EIPYKDVDSSAIIWGVGSNSLHLPVPSTCP  337 (904)
T ss_pred             CCCccccchheeEEeccCCcccccCcccCc
Confidence            9999765554332212 1235567777776

>KOG0611|consensus

Probab=99.96  E-value=3.5e-29  Score=197.07  Aligned_cols=163  Identities=15%  Similarity=0.163  Sum_probs=136.8

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      +|+|=.     .++.+++|.|++.   +..+.-+++|||+||+.|+||||++++.+|        .+.+...+||||..+
T Consensus        66 YGKVk~A~e~~sgR~VAiKsIrKdkIkdeqDlvhIRREIeIMSsLNHPhII~IyEVF--------ENkdKIvivMEYaS~  137 (668)
T KOG0611|consen   66 YGKVKLAYEHKSGREVAIKSIRKDKIKDEQDLVHIRREIEIMSSLNHPHIIQIYEVF--------ENKDKIVIVMEYASG  137 (668)
T ss_pred             ccceeehhhccCCcEeehhhhhhhhcccHHHHHHHHHHHHHHhhcCCCceeehhhhh--------cCCceEEEEEEecCC
Confidence            456554     4556667777774   334445688999999999999999999986        667789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      |.|.++        +.+.+.++ +||+.|+.|||.++       .+||       .||+|||++.          ++|++
T Consensus       138 GeLYDYiSer~~LsErEaRhfF-RQIvSAVhYCHknrVvHRDLKLENILLD~N~NiKIADFGLSNly~~~kfLqTFCGSP  216 (668)
T KOG0611|consen  138 GELYDYISERGSLSEREARHFF-RQIVSAVHYCHKNRVVHRDLKLENILLDQNNNIKIADFGLSNLYADKKFLQTFCGSP  216 (668)
T ss_pred             ccHHHHHHHhccccHHHHHHHH-HHHHHHHHHHhhccceecccchhheeecCCCCeeeeccchhhhhccccHHHHhcCCc
Confidence            999997        34577788 89999999999998       3344       6999999854          78999


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .|  .+||.+.+.+.-++.+|.||||+++|.+..|..||.|.+......+|.++
T Consensus       217 LY--ASPEIvNG~PY~GPEVDsWsLGvLLYtLVyGtMPFDG~Dhk~lvrQIs~G  268 (668)
T KOG0611|consen  217 LY--ASPEIVNGTPYKGPEVDSWSLGVLLYTLVYGTMPFDGRDHKRLVRQISRG  268 (668)
T ss_pred             cc--CCccccCCCCCCCCccchhhHHHHHHHHhhcccccCCchHHHHHHHhhcc
Confidence            99  99999999885579999999999999999999999999998888888653

>KOG0592|consensus

Probab=99.96  E-value=2.3e-29  Score=203.30  Aligned_cols=143  Identities=22%  Similarity=0.291  Sum_probs=125.2

Q ss_pred             hhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ..+-..+|-.+|.+| .||.|++++-        +++++..+|+++||+++|+|..+        +...+++. .||+.|
T Consensus       116 KvkYV~~Ek~~l~~L~~hPgivkLy~--------TFQD~~sLYFvLe~A~nGdll~~i~K~Gsfde~caR~YA-AeIldA  186 (604)
T KOG0592|consen  116 KVKYVTREKEALTQLSGHPGIVKLYF--------TFQDEESLYFVLEYAPNGDLLDLIKKYGSFDETCARFYA-AEILDA  186 (604)
T ss_pred             ccchhhHHHHHHHHhhCCCCeEEEEE--------EeecccceEEEEEecCCCcHHHHHHHhCcchHHHHHHHH-HHHHHH
Confidence            345577899999999 6999999988        44889999999999999999875        34567777 899999


Q ss_pred             HHHHhhcC-------CCCeE-------EEecCCc------------------------ccccccccccCCCCccccccCC
Q psy7174          98 LQALKSSM-------PALLK-------KFVGIGI------------------------GRHVCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        98 l~~lH~~~-------~~~il-------kl~dfg~------------------------~~~~~~~~y~~~aPe~~~~~~~  139 (188)
                      |+|||++|       |+|||       ||+|||.                        ++++||..|  .+||++.... 
T Consensus       187 leylH~~GIIHRDlKPENILLd~dmhikITDFGsAK~l~~~~~~~~~~~~~~~a~s~~~SFVGTAeY--VSPElL~~~~-  263 (604)
T KOG0592|consen  187 LEYLHSNGIIHRDLKPENILLDKDGHIKITDFGSAKILSPSQKSQENPVDPNQASSRRSSFVGTAEY--VSPELLNDSP-  263 (604)
T ss_pred             HHHHHhcCceeccCChhheeEcCCCcEEEeeccccccCChhhccccCccCcccccCcccceeeeecc--cCHHHhcCCC-
Confidence            99999999       88884       9999994                        237899999  9999998865 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      .++.+|+|+||||+|+|+.|+|||.+.|+.-.+++|...--.
T Consensus       264 ~~~~sDiWAlGCilyQmlaG~PPFra~NeyliFqkI~~l~y~  305 (604)
T KOG0592|consen  264 AGPSSDLWALGCILYQMLAGQPPFRAANEYLIFQKIQALDYE  305 (604)
T ss_pred             CCcccchHHHHHHHHHHhcCCCCCccccHHHHHHHHHHhccc
Confidence            899999999999999999999999999999999999775443

>KOG0574|consensus

Probab=99.96  E-value=1.2e-30  Score=198.77  Aligned_cols=167  Identities=16%  Similarity=0.177  Sum_probs=142.3

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      +|+||+ .++.+. ++|||+. ...+.+++.+|+.|+++++.|++|++||.|        +....+|+|||||..|+..+
T Consensus        46 YGSV~KAIH~EsG~v~AIK~VPV~sDLQEIIKEISIMQQC~S~yVVKYYGSY--------FK~sDLWIVMEYCGAGSiSD  117 (502)
T KOG0574|consen   46 YGSVHKAIHRESGHVLAIKKVPVDTDLQEIIKEISIMQQCKSKYVVKYYGSY--------FKHSDLWIVMEYCGAGSISD  117 (502)
T ss_pred             chHHHHHHHhccCcEEEEEecCccchHHHHHHHHHHHHHcCCchhhhhhhhh--------ccCCceEeehhhcCCCcHHH
Confidence            688998 778887 8899997 556789999999999999999999999954        66778999999999999988


Q ss_pred             H---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          82 F---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        82 ~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      +         ++++..++ +..++||+|||...       ..||       .|++|||.+.           .+||+.+ 
T Consensus       118 I~R~R~K~L~E~EIs~iL-~~TLKGL~YLH~~~KIHRDIKAGNILLNT~G~AKLADFGVAGQLTDTMAKRNTVIGTPFW-  195 (502)
T KOG0574|consen  118 IMRARRKPLSEQEISAVL-RDTLKGLQYLHDLKKIHRDIKAGNILLNTDGIAKLADFGVAGQLTDTMAKRNTVIGTPFW-  195 (502)
T ss_pred             HHHHhcCCccHHHHHHHH-HHHHhHHHHHHHHHHHHhhcccccEEEcccchhhhhhccccchhhhhHHhhCccccCccc-
Confidence            5         56788888 89999999999976       4455       4999999743           6799999 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                       +|||++..-. |+.++||||||++..||+.|+|||....++.   .|+.....|||..
T Consensus       196 -MAPEVI~EIG-Y~~~ADIWSLGITaIEMAEG~PPYsDIHPMR---AIFMIPT~PPPTF  249 (502)
T KOG0574|consen  196 -MAPEVIEEIG-YDTKADIWSLGITAIEMAEGRPPYSDIHPMR---AIFMIPTKPPPTF  249 (502)
T ss_pred             -ccHHHHHHhc-cchhhhHhhhcchhhhhhcCCCCcccccccc---eeEeccCCCCCCC
Confidence             9999998755 9999999999999999999999998776644   4666677777753

>KOG0582|consensus

Probab=99.96  E-value=3.1e-29  Score=198.61  Aligned_cols=150  Identities=18%  Similarity=0.267  Sum_probs=127.1

Q ss_pred             cccccc-----cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------
Q psy7174          17 NTPMAR-----CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------   82 (188)
Q Consensus        17 ~~~i~~-----~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------   82 (188)
                      ++|||+     |..+ ...+++|+..|+.++||||++++..|        ..+..+|+||-++.+|++.++         
T Consensus        53 ~VAIK~inLEkc~~~-ld~l~kE~~~msl~~HPNIv~~~~sF--------vv~~~LWvVmpfMa~GS~ldIik~~~~~Gl  123 (516)
T KOG0582|consen   53 VVAIKIINLEKCNND-LDALRKEVQTMSLIDHPNIVTYHCSF--------VVDSELWVVMPFMAGGSLLDIIKTYYPDGL  123 (516)
T ss_pred             EEEEEEeehhhhhhh-HHHHHHHHHHhhhcCCCCcceEEEEE--------EecceeEEeehhhcCCcHHHHHHHHccccc
Confidence            566666     3333 67899999999999999999999865        668899999999999998885         


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcc---------------cccccccccCCCCc
Q psy7174          83 -YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIG---------------RHVCTLYCTRGAPE  132 (188)
Q Consensus        83 -~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~---------------~~~~~~~y~~~aPe  132 (188)
                       +..+..++ +++++||.|||++|       +.||       +||+|||.+               .++||++|  +|||
T Consensus       124 ~E~~Ia~iL-re~LkaL~YLH~~G~IHRdvKAgnILi~~dG~VkLadFgvsa~l~~~G~R~~~rf~tfvgtp~w--mAPE  200 (516)
T KOG0582|consen  124 EEASIATIL-REVLKALDYLHQNGHIHRDVKAGNILIDSDGTVKLADFGVSASLFDSGDRQVTRFNTFVGTPCW--MAPE  200 (516)
T ss_pred             cHHHHHHHH-HHHHHHHHHHHhcCceecccccccEEEcCCCcEEEcCceeeeeecccCceeeEeeccccCcccc--cChH
Confidence             45688888 99999999999999       5666       599999952               35789999  9999


Q ss_pred             c-ccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         133 L-LFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       133 ~-~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      + ......|+.|+||||||++..|+++|..||....+.+++..-++.
T Consensus       201 vl~q~~~GYdfKaDIwSfGITA~ELA~G~aPf~k~pPmkvLl~tLqn  247 (516)
T KOG0582|consen  201 VLMQQLHGYDFKADIWSFGITACELAHGHAPFSKYPPMKVLLLTLQN  247 (516)
T ss_pred             HhhhcccCccchhhhhhhhHHHHHHhcCCCCcccCChHHHHHHHhcC
Confidence            9 445456999999999999999999999999999998887665543

>KOG1095|consensus

Probab=99.96  E-value=3.1e-29  Score=217.49  Aligned_cols=172  Identities=16%  Similarity=0.255  Sum_probs=140.5

Q ss_pred             cccccc------cCCc----cccccccc-cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ------QSKW----SPNTPMAR-CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~------~~~~----~~~~~i~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||.      .++.    +++|.+++ ++.....+|.+|..+|+.++||||++++|+|        .+....+|++||
T Consensus       705 FG~VY~g~~~~~~~~~~~~~vaiK~l~~~~~~~~~~~Fl~Ea~~m~~f~HpNiv~liGv~--------l~~~~~~i~ley  776 (1025)
T KOG1095|consen  705 FGEVYEGTYSDVPGSVSPIQVAVKSLKRLSSEQEVSDFLKEALLMSKFDHPNIVSLIGVC--------LDSGPPLILLEY  776 (1025)
T ss_pred             ccceEEEEEecCCCCccceEEEEEeccccCCHHHHHHHHHHHHHHhcCCCcceeeEEEee--------cCCCCcEEEehh
Confidence            788887      1222    23555555 3677888999999999999999999999997        456788999999


Q ss_pred             cccccHHHHH---------------HHHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCcccccc--
Q psy7174          74 FTKTTKARFY---------------SHLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHVC--  122 (188)
Q Consensus        74 ~~~~~l~~~~---------------~~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~~~--  122 (188)
                      |.+|+|..+.               .++..+. .||++|++||++++              -..++||+|||+++..-  
T Consensus       777 M~gGDL~sflr~~r~~~~~~~~L~~~dLl~~a-~dvA~G~~YLe~~~fvHRDLAaRNCLL~~~r~VKIaDFGlArDiy~~  855 (1025)
T KOG1095|consen  777 MEGGDLLSFLRESRPAPFQPSNLSMRDLLAFA-LDVAKGMNYLESKHFVHRDLAARNCLLDERRVVKIADFGLARDIYDK  855 (1025)
T ss_pred             cccCcHHHHHHhcccccCCCCCCCHHHHHHHH-HHHhhhhHHHHhCCCcCcchhhhheeecccCcEEEcccchhHhhhhc
Confidence            9999999874               2345555 69999999999988              22347999999977221  


Q ss_pred             -----------cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         123 -----------TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       123 -----------~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                                 .-.+  ||||.+.... |+.++|||||||++||+++ |..||.+.++.+.+.-..+.-+.++|..||
T Consensus       856 ~yyr~~~~a~lPvkW--m~PEsl~d~i-FtskSDvWsFGVllWEifslG~~PY~~~~n~~v~~~~~~ggRL~~P~~CP  930 (1025)
T KOG1095|consen  856 DYYRKHGEAMLPVKW--MPPESLKDGI-FTSKSDVWSFGVLLWEIFSLGATPYPSRSNFEVLLDVLEGGRLDPPSYCP  930 (1025)
T ss_pred             hheeccCccccceec--CCHHHHhhcc-cccccchhhhHHHHHHHHhCCCCCCCCcchHHHHHHHHhCCccCCCCCCC
Confidence                       1245  8999998865 9999999999999999997 899999999999998777777999999988

>KOG0578|consensus

Probab=99.96  E-value=8.2e-30  Score=206.61  Aligned_cols=150  Identities=23%  Similarity=0.312  Sum_probs=128.5

Q ss_pred             cccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHH
Q psy7174          17 NTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHL   86 (188)
Q Consensus        17 ~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~   86 (188)
                      .||+|+..   ....+-+.+|+.+|+..+|+|||++++.|        ..++.+|+||||+.+|+|.++       +.++
T Consensus       300 ~VaiK~m~l~~Q~~keLilnEi~Vm~~~~H~NiVnfl~Sy--------lv~deLWVVMEym~ggsLTDvVt~~~~~E~qI  371 (550)
T KOG0578|consen  300 EVAIKRMDLRKQPKKELLLNEILVMRDLHHPNIVNFLDSY--------LVGDELWVVMEYMEGGSLTDVVTKTRMTEGQI  371 (550)
T ss_pred             eEEEEEEEeccCCchhhhHHHHHHHHhccchHHHHHHHHh--------cccceeEEEEeecCCCchhhhhhcccccHHHH
Confidence            56677642   23345578999999999999999999954        556889999999999999886       5678


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcc-----------cccccccccCCCCccccccCCCC
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIG-----------RHVCTLYCTRGAPELLFGARMYG  141 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~-----------~~~~~~~y~~~aPe~~~~~~~~~  141 (188)
                      +.++ ++++.||+|||.++       .+||       +||+|||+.           +.+||+.|  ||||++.... |+
T Consensus       372 A~Ic-re~l~aL~fLH~~gIiHrDIKSDnILL~~~g~vKltDFGFcaqi~~~~~KR~TmVGTPYW--MAPEVvtrk~-YG  447 (550)
T KOG0578|consen  372 AAIC-REILQGLKFLHARGIIHRDIKSDNILLTMDGSVKLTDFGFCAQISEEQSKRSTMVGTPYW--MAPEVVTRKP-YG  447 (550)
T ss_pred             HHHH-HHHHHHHHHHHhcceeeeccccceeEeccCCcEEEeeeeeeeccccccCccccccCCCCc--cchhhhhhcc-cC
Confidence            8888 99999999999998       3444       699999973           36899999  9999998866 99


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         142 VGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       142 ~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .++||||||+..+||+.|+|||-.+++...+..|...
T Consensus       448 ~KVDIWSLGIMaIEMveGEPPYlnE~PlrAlyLIa~n  484 (550)
T KOG0578|consen  448 PKVDIWSLGIMAIEMVEGEPPYLNENPLRALYLIATN  484 (550)
T ss_pred             ccccchhhhhHHHHHhcCCCCccCCChHHHHHHHhhc
Confidence            9999999999999999999999999998888888654

>KOG0577|consensus

Probab=99.96  E-value=5.7e-30  Score=208.96  Aligned_cols=164  Identities=20%  Similarity=0.243  Sum_probs=136.9

Q ss_pred             ccccccc-cCCcc-cccccccc------chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           4 VCFKPFQ-QSKWS-PNTPMARC------DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         4 ~~g~v~~-~~~~~-~~~~i~~~------~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      .||.||. .+... -++|||+.      +....+++.+|++.|++++|||+|.+.|||        ..+...|+|||||-
T Consensus        38 SFGAVYfArd~~n~evVAIKKMsySGKQs~EKWqDIlKEVrFL~~l~HPntieYkgCy--------Lre~TaWLVMEYCl  109 (948)
T KOG0577|consen   38 SFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDILKEVRFLRQLRHPNTIEYKGCY--------LREHTAWLVMEYCL  109 (948)
T ss_pred             ccceeEEeeccCccceeeeeeccccccccHHHHHHHHHHHHHHHhccCCCccccccee--------eccchHHHHHHHHh
Confidence            4999998 44443 48888883      466778899999999999999999999986        66778999999997


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcc-------cccccccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIG-------RHVCTLYC  126 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~-------~~~~~~~y  126 (188)
                      |.--+.+        +..|..+. -+.+.||.|||+.+       .+||       ||++|||.+       +++||++|
T Consensus       110 GSAsDlleVhkKplqEvEIAAi~-~gaL~gLaYLHS~~~IHRDiKAGNILLse~g~VKLaDFGSAsi~~PAnsFvGTPyw  188 (948)
T KOG0577|consen  110 GSASDLLEVHKKPLQEVEIAAIT-HGALQGLAYLHSHNRIHRDIKAGNILLSEPGLVKLADFGSASIMAPANSFVGTPYW  188 (948)
T ss_pred             ccHHHHHHHHhccchHHHHHHHH-HHHHHHHHHHHHhhHHhhhccccceEecCCCeeeeccccchhhcCchhcccCCccc
Confidence            6554443        34577777 79999999999988       3444       699999974       38999999


Q ss_pred             cCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         127 TRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       127 ~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                        ||||+++.  .+.|+-++|||||||++.|++..+||+..+|.+..+-.|.+-
T Consensus       189 --MAPEVILAMDEGqYdgkvDvWSLGITCIELAERkPPlFnMNAMSALYHIAQN  240 (948)
T KOG0577|consen  189 --MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  240 (948)
T ss_pred             --cchhHheeccccccCCccceeeccchhhhhhhcCCCccCchHHHHHHHHHhc
Confidence              99999863  345999999999999999999999999999999998888764

>KOG0196|consensus

Probab=99.96  E-value=1.1e-29  Score=212.14  Aligned_cols=172  Identities=16%  Similarity=0.186  Sum_probs=142.5

Q ss_pred             cccccc------cCC--cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ------QSK--WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~------~~~--~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.|..      ..+  .++||++|.. +.+.+.+|+.|+.||.+++||||+++-|+.        ......+|+.|||.
T Consensus       642 FGEVc~GrLk~pgkre~~VAIKTLK~GytekqrrdFL~EAsIMGQFdHPNIIrLEGVV--------Tks~PvMIiTEyME  713 (996)
T KOG0196|consen  642 FGEVCSGRLKLPGKREITVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIRLEGVV--------TKSKPVMIITEYME  713 (996)
T ss_pred             ccceecccccCCCCcceeEEEeeeccCccHHHHhhhhhhhhhcccCCCCcEEEEEEEE--------ecCceeEEEhhhhh
Confidence            666665      223  3448888876 677888999999999999999999999985        44567899999999


Q ss_pred             cccHHHHHH---------HHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCcccccc----------
Q psy7174          76 KTTKARFYS---------HLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHVC----------  122 (188)
Q Consensus        76 ~~~l~~~~~---------~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~~~----------  122 (188)
                      .|.|+.|+.         ++.-.+ +.|+.||+||-+++              .+.++|++|||+++..-          
T Consensus       714 NGsLDsFLR~~DGqftviQLVgML-rGIAsGMkYLsdm~YVHRDLAARNILVNsnLvCKVsDFGLSRvledd~~~~ytt~  792 (996)
T KOG0196|consen  714 NGSLDSFLRQNDGQFTVIQLVGML-RGIASGMKYLSDMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTL  792 (996)
T ss_pred             CCcHHHHHhhcCCceEeehHHHHH-HHHHHHhHHHhhcCchhhhhhhhheeeccceEEEeccccceeecccCCCcccccc
Confidence            999999843         344455 89999999998888              22235999999987431          


Q ss_pred             ----cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         123 ----TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       123 ----~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                          ...+  .|||.+..-+ ++++|||||+||++||.++ |..||..+++.+.+..|.+.++.|+|.+||
T Consensus       793 GGKIPiRW--TAPEAIa~RK-FTsASDVWSyGIVmWEVmSyGERPYWdmSNQdVIkaIe~gyRLPpPmDCP  860 (996)
T KOG0196|consen  793 GGKIPIRW--TAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEQGYRLPPPMDCP  860 (996)
T ss_pred             CCccceee--cChhHhhhcc-cCchhhccccceEEEEecccCCCcccccchHHHHHHHHhccCCCCCCCCc
Confidence                1234  6999998866 9999999999999999984 999999999999999999999999999998

>cd07869 STKc_PFTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-1 kinase

Probab=99.96  E-value=2.3e-28  Score=192.14  Aligned_cols=173  Identities=29%  Similarity=0.476  Sum_probs=129.8

Q ss_pred             cccccc-cC----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ ..    +..++|.++.. .......+.+|+++++.++||||+++++++        .++...++++||+.++.
T Consensus        18 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~~l   89 (303)
T cd07869          18 YATVYKGKSKVNGKLVALKVIRLQEEEGTPFTAIREASLLKGLKHANIVLLHDII--------HTKETLTLVFEYVHTDL   89 (303)
T ss_pred             CEEEEEEEECCCCCEEEEEEeccccccccchhHHHHHHHHhhCCCCCcCeEEEEE--------ecCCeEEEEEECCCcCH
Confidence            678887 22    22334444332 222334678999999999999999999975        44567899999997654


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      +..+        ...++.++ .|++.||+|||+.+       |+|+       +||+|||++.           ..++..
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  168 (303)
T cd07869          90 CQYMDKHPGGLHPENVKLFL-FQLLRGLSYIHQRYILHRDLKPQNLLISDTGELKLADFGLARAKSVPSHTYSNEVVTLW  168 (303)
T ss_pred             HHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECCCCcceeccCCCccCCCCcccCC
Confidence            4433        34566677 89999999999998       5555       6999999753           345778


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES-DLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||++.+...++.++|+||+||++|+|++|.+||.+.. ..+.+..+....+.|....||
T Consensus       169 y--~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (303)
T cd07869         169 Y--RPPDVLLGSTEYSTCLDMWGVGCIFVEMIQGVAAFPGMKDIQDQLERIFLVLGTPNEDTWP  230 (303)
T ss_pred             C--CChHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHHhCCCChhhcc
Confidence            9  999998765558899999999999999999999998754 456677777777777666554

Serine/Threonine Kinases (STKs), PFTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-1 is widely expressed except in the spleen and thymus. It is highly expressed in the brain, heart, pancreas, testis, and ovary, and is localized in the cytoplasm. It is regulated by cyclin D3 an

>KOG0198|consensus

Probab=99.96  E-value=4.2e-29  Score=195.07  Aligned_cols=163  Identities=22%  Similarity=0.244  Sum_probs=121.6

Q ss_pred             ccccccc-cCC----ccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCC-CccEEEEeccccc
Q psy7174           4 VCFKPFQ-QSK----WSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLST-SSDYIVVKIFTKT   77 (188)
Q Consensus         4 ~~g~v~~-~~~----~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~-~~~~iv~e~~~~~   77 (188)
                      .||.|+. .++    +.++|.+........+.+.+|+++|++++|||||+++|...       ..+ ...+++|||+++|
T Consensus        29 s~G~V~l~~~~~~g~~~AvK~v~~~~~~~~~~l~~Ei~iL~~l~~p~IV~~~G~~~-------~~~~~~~~i~mEy~~~G  101 (313)
T KOG0198|consen   29 SFGSVYLATNKKTGELMAVKSVELEDSPTSESLEREIRILSRLNHPNIVQYYGSSS-------SRENDEYNIFMEYAPGG  101 (313)
T ss_pred             cceEEEEEEecCCCcceeeeeeecccchhHHHHHHHHHHHHhCCCCCEEeeCCccc-------cccCeeeEeeeeccCCC
Confidence            4788887 222    33344443332122566899999999999999999999521       112 3689999999999


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCC--------eEEEecCCccc--------------
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSSM-------PAL--------LKKFVGIGIGR--------------  119 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~--------ilkl~dfg~~~--------------  119 (188)
                      ++.++         +..++.+. +||++||+|||+++       ++|        .+||+|||++.              
T Consensus       102 sL~~~~~~~g~~l~E~~v~~yt-r~iL~GL~ylHs~g~vH~DiK~~NiLl~~~~~~~KlaDFG~a~~~~~~~~~~~~~~~  180 (313)
T KOG0198|consen  102 SLSDLIKRYGGKLPEPLVRRYT-RQILEGLAYLHSKGIVHCDIKPANILLDPSNGDVKLADFGLAKKLESKGTKSDSELS  180 (313)
T ss_pred             cHHHHHHHcCCCCCHHHHHHHH-HHHHHHHHHHHhCCEeccCcccceEEEeCCCCeEEeccCcccccccccccccccccc
Confidence            99986         45678888 99999999999988       444        46999999633              


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC-CChHHHHHHHH
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDLDQLTRIF  176 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~~~~~~i~  176 (188)
                      ..||+.|  ||||++.+......++||||+||++.||++|++||.. ......+..|.
T Consensus       181 ~~Gtp~~--maPEvi~~g~~~~~~sDiWSlGCtVvEM~Tg~~PW~~~~~~~~~~~~ig  236 (313)
T KOG0198|consen  181 VQGTPNY--MAPEVIRNGEVARRESDIWSLGCTVVEMLTGKPPWSEFFEEAEALLLIG  236 (313)
T ss_pred             ccCCccc--cCchhhcCCCcCCccchhhhcCCEEEeccCCCCcchhhcchHHHHHHHh
Confidence            5688999  9999998632233599999999999999999999987 34334344443

>KOG0194|consensus

Probab=99.96  E-value=6.8e-29  Score=202.22  Aligned_cols=172  Identities=16%  Similarity=0.237  Sum_probs=133.9

Q ss_pred             cccccc-----cCCcccc-cccccc------chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-----QSKWSPN-TPMARC------DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~-~~i~~~------~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||.     .+..... +|++.+      .....+++.+|+++|++++|||||+++|++        ..+..++++||
T Consensus       170 FGeV~~G~l~~~~~~~~~~VAvK~~k~~~~~~~~~~~e~m~EArvMr~l~H~NVVr~yGVa--------~~~~Pl~ivmE  241 (474)
T KOG0194|consen  170 FGEVFKGKLKLKNGFKVVPVAVKTTKGSSELTKEQIKEFMKEARVMRQLNHPNVVRFYGVA--------VLEEPLMLVME  241 (474)
T ss_pred             ccEEEEEEEEecCCceeeeeEEEeecccccccHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--------cCCCccEEEEE
Confidence            888887     1110111 445542      355677899999999999999999999986        45678999999


Q ss_pred             ccccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCcccccc-------
Q psy7174          73 IFTKTTKARFY---------SHLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHVC-------  122 (188)
Q Consensus        73 ~~~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~~~-------  122 (188)
                      +|.+|+|..+.         .+...++ .+.+.||+|||+++              ...++||+|||++....       
T Consensus       242 l~~gGsL~~~L~k~~~~v~~~ek~~~~-~~AA~Gl~YLh~k~~IHRDIAARNcL~~~~~~vKISDFGLs~~~~~~~~~~~  320 (474)
T KOG0194|consen  242 LCNGGSLDDYLKKNKKSLPTLEKLRFC-YDAARGLEYLHSKNCIHRDIAARNCLYSKKGVVKISDFGLSRAGSQYVMKKF  320 (474)
T ss_pred             ecCCCcHHHHHHhCCCCCCHHHHHHHH-HHHHhHHHHHHHCCCcchhHhHHHheecCCCeEEeCccccccCCcceeeccc
Confidence            99999999863         2233344 59999999999998              33447999999976321       


Q ss_pred             ----cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH-HhhcCCCCCCCCC
Q psy7174         123 ----TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI-FQTLGTPSEDTWP  188 (188)
Q Consensus       123 ----~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i-~~~~~~p~~~~~p  188 (188)
                          ...|  +|||.+.... |+.++||||+||++||+++ |..||.+....+...+| ....+.|.|..-|
T Consensus       321 ~~klPirW--LAPEtl~~~~-~s~kTDV~sfGV~~~Eif~~g~~Py~g~~~~~v~~kI~~~~~r~~~~~~~p  389 (474)
T KOG0194|consen  321 LKKLPIRW--LAPETLNTGI-FSFKTDVWSFGVLLWEIFENGAEPYPGMKNYEVKAKIVKNGYRMPIPSKTP  389 (474)
T ss_pred             cccCccee--cChhhhccCc-cccccchhheeeeEEeeeccCCCCCCCCCHHHHHHHHHhcCccCCCCCCCH
Confidence                2346  8999998875 9999999999999999997 88899999999999999 4477777665443

>cd05628 STKc_NDR1 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 1

Probab=99.96  E-value=1.7e-28  Score=197.74  Aligned_cols=161  Identities=14%  Similarity=0.186  Sum_probs=129.5

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+.+.   .....+.+.+|++++.+++||||+++++.+        .++...+++|||+++
T Consensus        14 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~~~~~~iv~~~~~~--------~~~~~~~lv~E~~~g   85 (363)
T cd05628          14 FGEVRLVQKKDTGHVYAMKILRKADMLEKEQVGHIRAERDILVEADSLWVVKMFYSF--------QDKLNLYLIMEFLPG   85 (363)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHhCCCCCcceEEEEE--------ecCCeEEEEEcCCCC
Confidence            678886     2333445555442   123345678899999999999999999975        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||+|||+++       |+|+       +||+|||++.               
T Consensus        86 g~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~lH~~givHrDlKp~NILi~~~~~vkL~DFGla~~~~~~~~~~~~~~~~  164 (363)
T cd05628          86 GDMMTLLMKKDTLTEEETQFYI-AETVLAIDSIHQLGFIHRDIKPDNLLLDSKGHVKLSDFGLCTGLKKAHRTEFYRNLN  164 (363)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEecCCCHHHeEECCCCCEEEeeccCccccccccccccccccc
Confidence            998875        34566677 79999999999998       5565       5999999743               


Q ss_pred             -------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         120 -------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       120 -------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                                                     .+||..|  +|||++.+.. ++.++|+||+||++|||++|++||.+.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Gt~~Y--~aPE~~~~~~-~~~~~DvwSlGvil~ell~G~~Pf~~~~~  241 (363)
T cd05628         165 HSLPSDFTFQNMNSKRKAETWKRNRRQLAFSTVGTPDY--IAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (363)
T ss_pred             ccccccccccccccccccchhhhccccccccccCCccc--cCHHHHcCCC-CCCchhhhhhHHHHHHHHhCCCCCCCCCH
Confidence                                           2578899  9999998765 89999999999999999999999999888


Q ss_pred             HHHHHHHHh
Q psy7174         169 LDQLTRIFQ  177 (188)
Q Consensus       169 ~~~~~~i~~  177 (188)
                      .+...+|..
T Consensus       242 ~~~~~~i~~  250 (363)
T cd05628         242 QETYKKVMN  250 (363)
T ss_pred             HHHHHHHHc
Confidence            887777764

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. NDR1 is highly expressed in thymus, mus

>KOG0579|consensus

Probab=99.96  E-value=5e-29  Score=204.99  Aligned_cols=163  Identities=17%  Similarity=0.194  Sum_probs=137.3

Q ss_pred             cccccc-cCCccccccccc----cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSKWSPNTPMAR----CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~~~~~~~i~~----~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||+||+ .++...+-|..+    .+....+++.-||+||..++||+|+++++.||+        ++.+||+.|||+||-+
T Consensus        45 FGKVyKA~nket~~lAAaKvIetkseEELEDylVEIeILa~CdHP~ivkLl~ayy~--------enkLwiliEFC~GGAV  116 (1187)
T KOG0579|consen   45 FGKVYKAVNKETKLLAAAKVIETKSEEELEDYLVEIEILAECDHPVIVKLLSAYYF--------ENKLWILIEFCGGGAV  116 (1187)
T ss_pred             chhhhhhhcccchhhhhhhhhcccchhHHhhhhhhhhhhhcCCChHHHHHHHHHhc--------cCceEEEEeecCCchH
Confidence            899999 555444322222    355667889999999999999999999998744        6789999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      +.+         ++++.+++ +|++.||.|||+++       .+||       ++++|||.+.           ++||++
T Consensus       117 DaimlEL~r~LtE~QIqvvc-~q~ldALn~LHs~~iIHRDLKAGNiL~TldGdirLADFGVSAKn~~t~qkRDsFIGTPY  195 (1187)
T KOG0579|consen  117 DAIMLELGRVLTEDQIQVVC-YQVLDALNWLHSQNIIHRDLKAGNILLTLDGDIRLADFGVSAKNKSTRQKRDSFIGTPY  195 (1187)
T ss_pred             hHHHHHhccccchHHHHHHH-HHHHHHHHHHhhcchhhhhccccceEEEecCcEeeecccccccchhHHhhhccccCCcc
Confidence            875         56788888 99999999999998       5566       4999999743           789999


Q ss_pred             ccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         126 CTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       126 y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |  ||||++.+    ...|++++||||||+++.||+.+.||-+.-+++..+.+|...
T Consensus       196 W--MAPEVvmCET~KD~PYDykaDiWSlGITLIEMAqiEPPHhelnpMRVllKiaKS  250 (1187)
T KOG0579|consen  196 W--MAPEVVMCETFKDQPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIAKS  250 (1187)
T ss_pred             c--ccchheeeccccCCCchhhhhHHhhhhHHHHHhccCCCccccchHHHHHHHhhc
Confidence            9  99999854    234999999999999999999999999999999999888754

>KOG0666|consensus

Probab=99.96  E-value=5.6e-29  Score=189.99  Aligned_cols=174  Identities=32%  Similarity=0.547  Sum_probs=139.3

Q ss_pred             cccccc--c----CCcccccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ--Q----SKWSPNTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~--~----~~~~~~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      +|+||+  .    .+.....|||+.     ..-....+-||+.+++.++|||++.+..+|..       .+...++++||
T Consensus        37 YG~VykA~~~~~n~kr~k~yAiKkfk~~kd~tGiS~SAcREiaL~REl~h~nvi~Lv~Vfl~-------~d~~v~l~fdY  109 (438)
T KOG0666|consen   37 YGKVYKAVRKNTNDKRTKEYAIKKFKGEKDGTGISMSACREIALLRELKHPNVISLVKVFLS-------HDKKVWLLFDY  109 (438)
T ss_pred             cceeeEeeeccCCcccchhhHHHHHhccCCCCCcCHHHHHHHHHHHHhcCCcchhHHHHHhc-------cCceEEEEehh
Confidence            578887  1    122223444442     22345678899999999999999999998632       27789999999


Q ss_pred             cccccHHHH------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc----
Q psy7174          74 FTKTTKARF------------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR----  119 (188)
Q Consensus        74 ~~~~~l~~~------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~----  119 (188)
                      .....++-+            ..-++.++ +||+.|+.|||++=       |.||           +||+|+|+++    
T Consensus       110 AEhDL~~II~fHr~~~~~~lp~~mvKsil-wQil~Gv~YLH~NWvlHRDLKPaNIlvmgdgperG~VKIaDlGlaR~~~~  188 (438)
T KOG0666|consen  110 AEHDLWHIIKFHRASKAKQLPRSMVKSIL-WQILDGVHYLHSNWVLHRDLKPANILVMGDGPERGRVKIADLGLARLFNN  188 (438)
T ss_pred             hhhhHHHHHHHhccchhccCCHHHHHHHH-HHHHhhhHHHhhhheeeccCCcceEEEeccCCccCeeEeecccHHHHhhc
Confidence            976655543            24477788 89999999999974       6665           6999999865    


Q ss_pred             ----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHhhcC
Q psy7174         120 ----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES---------DLDQLTRIFQTLG  180 (188)
Q Consensus       120 ----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------~~~~~~~i~~~~~  180 (188)
                                .+-|.||  +|||++++...|+++.|+|++|||+.||++.+|.|.+..         ..+++.+|++.+|
T Consensus       189 plkpl~s~d~VVVTiWY--RAPELLLGa~hYT~AiDvWAiGCIfaElLtl~PlF~g~E~k~~~~~Pfq~dQl~rIf~vLG  266 (438)
T KOG0666|consen  189 PLKPLASLDPVVVTIWY--RAPELLLGARHYTKAIDVWAIGCIFAELLTLEPLFKGREEKIKTKNPFQHDQLDRIFEVLG  266 (438)
T ss_pred             cccccccCCceEEEEEe--cChHHhcccccccchhhhHHHHHHHHHHHccCccccchhhhcccCCCchHHHHHHHHHHcC
Confidence                      3457899  999999999999999999999999999999999997642         4788999999999


Q ss_pred             CCCCCCCC
Q psy7174         181 TPSEDTWP  188 (188)
Q Consensus       181 ~p~~~~~p  188 (188)
                      .|..++||
T Consensus       267 ~Pt~~~Wp  274 (438)
T KOG0666|consen  267 TPTDKDWP  274 (438)
T ss_pred             CCccccch
Confidence            99999998

>KOG0588|consensus

Probab=99.96  E-value=1.4e-28  Score=202.68  Aligned_cols=143  Identities=17%  Similarity=0.214  Sum_probs=123.9

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      .....+.+||-||+.+.|||++++++++        .+..++|++.||+++|.|..+        +.+...++ +||+.|
T Consensus        54 s~~~~IerEIviMkLi~HpnVl~LydVw--------e~~~~lylvlEyv~gGELFdylv~kG~l~e~eaa~ff-~QIi~g  124 (786)
T KOG0588|consen   54 SQPAGIEREIVIMKLIEHPNVLRLYDVW--------ENKQHLYLVLEYVPGGELFDYLVRKGPLPEREAAHFF-RQILDG  124 (786)
T ss_pred             ccccchhhhhHHHHHhcCCCeeeeeeee--------ccCceEEEEEEecCCchhHHHHHhhCCCCCHHHHHHH-HHHHHH
Confidence            3456788999999999999999999987        556789999999999999886        34455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      +.|||..+       |+|+       +||+|||++.          .+|++.|  .|||++.+.++.+.++||||+|||+
T Consensus       125 v~yCH~~~icHRDLKpENlLLd~~~nIKIADFGMAsLe~~gklLeTSCGSPHY--A~PEIV~G~pYdG~~sDVWSCGVIL  202 (786)
T KOG0588|consen  125 VSYCHAFNICHRDLKPENLLLDVKNNIKIADFGMASLEVPGKLLETSCGSPHY--AAPEIVSGRPYDGRPSDVWSCGVIL  202 (786)
T ss_pred             HHHHhhhcceeccCCchhhhhhcccCEeeeccceeecccCCccccccCCCccc--CCchhhcCCCCCCCccccchhHHHH
Confidence            99999988       6655       5999999754          6899999  9999999988557899999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |.+++|+.||.++|-...+.++.++.
T Consensus       203 fALLtG~LPFdDdNir~LLlKV~~G~  228 (786)
T KOG0588|consen  203 FALLTGKLPFDDDNIRVLLLKVQRGV  228 (786)
T ss_pred             HHHHhCCCCCCCccHHHHHHHHHcCc
Confidence            99999999999999988888887654

>PTZ00036 glycogen synthase kinase; Provisional

Probab=99.96  E-value=1.8e-28  Score=202.28  Aligned_cols=176  Identities=26%  Similarity=0.395  Sum_probs=129.1

Q ss_pred             cccccc-cCCcc-ccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+ ..+.. ..+|+|+.. .......+|+.+++.++||||++++++++.............+++|||++++....+
T Consensus        79 fg~Vy~~~~~~~~~~vAiK~i~-~~~~~~~~Ei~il~~l~h~niv~l~~~~~~~~~~~~~~~~~l~lvmE~~~~~l~~~~  157 (440)
T PTZ00036         79 FGVVYEAICIDTSEKVAIKKVL-QDPQYKNRELLIMKNLNHINIIFLKDYYYTECFKKNEKNIFLNVVMEFIPQTVHKYM  157 (440)
T ss_pred             CEEEEEEEECCCCCEEEEEEEe-cCcchHHHHHHHHHhcCCCCCcceeeeEeecccccCCCceEEEEEEecCCccHHHHH
Confidence            678887 22222 244455432 122345689999999999999999987643211111223356789999987543322


Q ss_pred             -----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------ccccccc
Q psy7174          83 -----------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYC  126 (188)
Q Consensus        83 -----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y  126 (188)
                                 +..+..++ .|++.||.|||+.+       |+|+        +||+|||++.          ..||+.|
T Consensus       158 ~~~~~~~~~l~~~~~~~~~-~qi~~gL~yLH~~~IiHrDLKp~NILl~~~~~~vkL~DFGla~~~~~~~~~~~~~~t~~y  236 (440)
T PTZ00036        158 KHYARNNHALPLFLVKLYS-YQLCRALAYIHSKFICHRDLKPQNLLIDPNTHTLKLCDFGSAKNLLAGQRSVSYICSRFY  236 (440)
T ss_pred             HHHhhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCEecCCcCHHHEEEcCCCCceeeeccccchhccCCCCcccCCCCcCc
Confidence                       23455566 79999999999988       4444        6999999864          3567889


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                        +|||++.+...|+.++||||+||++|||++|.+||.+.+..+.+.++.+.++.|..
T Consensus       237 --~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~~~p~~  292 (440)
T PTZ00036        237 --RAPELMLGATNYTTHIDLWSLGCIIAEMILGYPIFSGQSSVDQLVRIIQVLGTPTE  292 (440)
T ss_pred             --cCHHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence              99999876555899999999999999999999999999998899888887776653

>cd05629 STKc_NDR_like_fungal Catalytic domain of Fungal Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.96  E-value=7.1e-29  Score=200.79  Aligned_cols=161  Identities=17%  Similarity=0.219  Sum_probs=127.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   ..+..+.+.+|++++++++||||++++++|        .++...+++|||+++
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~--------~~~~~~~lv~E~~~g   85 (377)
T cd05629          14 FGEVRLVQKKDTGKIYAMKTLLKSEMFKKDQLAHVKAERDVLAESDSPWVVSLYYSF--------QDAQYLYLIMEFLPG   85 (377)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHHHhHHHHHHHHHHHHHHhCCCCCcceEEEEE--------EcCCeeEEEEeCCCC
Confidence            678886 2    233334444332   223446678899999999999999999975        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||+|||+.+       |+|+       +|++|||+++               
T Consensus        86 g~L~~~l~~~~~~~~~~~~~~~-~ql~~aL~~LH~~givHrDlkp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~~  164 (377)
T cd05629          86 GDLMTMLIKYDTFSEDVTRFYM-AECVLAIEAVHKLGFIHRDIKPDNILIDRGGHIKLSDFGLSTGFHKQHDSAYYQKLL  164 (377)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeeccCCCHHHEEECCCCCEEEeecccccccccccccccccccc
Confidence            999875        34466677 79999999999998       6666       5999999763               


Q ss_pred             -------------------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         120 -------------------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       120 -------------------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                                                                 ..||..|  +|||++.+.. ++.++||||+||++|||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlGvil~el  241 (377)
T cd05629         165 QGKSNKNRIDNRNSVAVDSINLTMSSKDQIATWKKNRRLMAYSTVGTPDY--IAPEIFLQQG-YGQECDWWSLGAIMFEC  241 (377)
T ss_pred             cccccccccccccccccccccccccchhhhhhhhhcccccccccCCCccc--cCHHHHccCC-CCCceeeEecchhhhhh
Confidence                                                       3578889  9999997755 89999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHh
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++|.+||.+.+..+.+..+..
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~  262 (377)
T cd05629         242 LIGWPPFCSENSHETYRKIIN  262 (377)
T ss_pred             hcCCCCCCCCCHHHHHHHHHc
Confidence            999999998887777666654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, fungal NDR-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group is composed of fungal NDR-like proteins including Saccharomyces cerevisiae CBK1 (or CBK1p), Schizosaccharomyces pombe Orb6 (or Orb6p), Ustilago maydis Ukc1 (or Ukc1p), and Neurospora crassa Cot1. Like NDR kinase, group members contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. CBK1 is an essential component in the RAM (regulation of

>cd05625 STKc_LATS1 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 1

Probab=99.96  E-value=1.2e-28  Score=199.69  Aligned_cols=161  Identities=17%  Similarity=0.202  Sum_probs=127.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|++++++++||||+++++.|        .++...+++|||+++
T Consensus        14 ~g~Vy~a~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~~~h~~iv~~~~~~--------~~~~~~~lv~E~~~g   85 (382)
T cd05625          14 FGEVCLARKVDTKALYAMKTLRKKDVLLRNQVAHVKAERDILAEADNEWVVRLYYSF--------QDKDNLYFVMDYIPG   85 (382)
T ss_pred             CEEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhCCCCcCCeEEEEE--------EeCCEEEEEEeCCCC
Confidence            678887 2    223334444332   223456788999999999999999999976        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||.|||+.+       |+|+       +||+|||++.               
T Consensus        86 g~L~~~l~~~~~~~e~~~~~~~-~qi~~al~~lH~~~ivHrDlKp~NILl~~~g~~kL~DFGla~~~~~~~~~~~~~~~~  164 (382)
T cd05625          86 GDMMSLLIRMGIFPEDLARFYI-AELTCAVESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQSGD  164 (382)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEEeECCCCcccccccccccccccc
Confidence            998775        34466667 79999999999998       5565       5999999742               


Q ss_pred             -------------------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         120 -------------------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       120 -------------------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                                                                 ..||..|  +|||++.+.. ++.++||||+||++|||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y--~aPE~~~~~~-~~~~~DiwSlGvil~el  241 (382)
T cd05625         165 HVRQDSMDFSNEWGDPANCRCGDRLKPLERRAARQHQRCLAHSLVGTPNY--IAPEVLLRTG-YTQLCDWWSVGVILYEM  241 (382)
T ss_pred             ccccccccccccccccccccccccccchhhhhccccccccccccccCccc--CCHHHhcCCC-CCCeeeEEechHHHHHH
Confidence                                                       2578889  9999998765 99999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHh
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++|++||.+.++.+....+..
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~~  262 (382)
T cd05625         242 LVGQPPFLAQTPLETQMKVIN  262 (382)
T ss_pred             HhCCCCCCCCCHHHHHHHHHc
Confidence            999999998887776666654

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. Promoter methylation, loss of heterozygosity, and missense mutations targeting the LATS1 gene have also been found in human sarcomas and ovarian cancers. In addition, decreased expression of LATS1 is associated with an aggressive phenotype an

>KOG0585|consensus

Probab=99.96  E-value=2e-28  Score=195.29  Aligned_cols=142  Identities=22%  Similarity=0.319  Sum_probs=121.2

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~   99 (188)
                      .++..+||.||++|+|||||+++.+.      .....+..|+|+|||..|.+...        +++.+.++ ++++.||+
T Consensus       152 ~ekv~~EIailKkl~H~nVV~LiEvL------DDP~s~~~YlVley~s~G~v~w~p~d~~els~~~Ar~yl-rDvv~GLE  224 (576)
T KOG0585|consen  152 IEKVRREIAILKKLHHPNVVKLIEVL------DDPESDKLYLVLEYCSKGEVKWCPPDKPELSEQQARKYL-RDVVLGLE  224 (576)
T ss_pred             HHHHHHHHHHHHhcCCcCeeEEEEee------cCcccCceEEEEEeccCCccccCCCCcccccHHHHHHHH-HHHHHHHH
Confidence            36789999999999999999999985      44667889999999999887652        46677788 89999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCcc----------------cccccccccCCCCccccccC---CCCchhHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIG----------------RHVCTLYCTRGAPELLFGAR---MYGVGIDM  146 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~----------------~~~~~~~y~~~aPe~~~~~~---~~~~~~Di  146 (188)
                      |||.++       |+|+       +||+|||.+                +.+||+.|  +|||.+....   .-+.+.||
T Consensus       225 YLH~QgiiHRDIKPsNLLl~~~g~VKIsDFGVs~~~~~~~~~~~d~~L~~tvGTPAF--~APE~c~~~~~~~~~g~a~Di  302 (576)
T KOG0585|consen  225 YLHYQGIIHRDIKPSNLLLSSDGTVKISDFGVSNEFPQGSDEGSDDQLSRTVGTPAF--FAPELCSGGNSFSYSGFALDI  302 (576)
T ss_pred             HHHhcCeeccccchhheEEcCCCcEEeeccceeeecccCCccccHHHHhhcCCCccc--cchHhhcCCCCccccchhhhh
Confidence            999998       7777       599999963                36799999  9999997632   23578999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         147 WAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       147 wslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ||+||+||.++.|+.||.++...+...+|...
T Consensus       303 WalGVTLYCllfG~~PF~~~~~~~l~~KIvn~  334 (576)
T KOG0585|consen  303 WALGVTLYCLLFGQLPFFDDFELELFDKIVND  334 (576)
T ss_pred             hhhhhhHHHhhhccCCcccchHHHHHHHHhcC
Confidence            99999999999999999999998898888754

>KOG0201|consensus

Probab=99.96  E-value=2.5e-30  Score=204.28  Aligned_cols=157  Identities=18%  Similarity=0.228  Sum_probs=130.5

Q ss_pred             ccccccc--cCCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           4 VCFKPFQ--QSKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         4 ~~g~v~~--~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      -||.||+  .++...++|+|..    ..+..+++++|+.+|..++++||.++|+.|        ..+..+|++||||.+|
T Consensus        25 sfG~Vyk~~d~~t~k~vAiKii~Le~~~deIediqqei~~Ls~~~~~~it~yygsy--------l~g~~LwiiMey~~gG   96 (467)
T KOG0201|consen   25 SFGEVYKAIDNKTKKVVAIKIIDLEEAEDEIEDIQQEISVLSQCDSPNITEYYGSY--------LKGTKLWIIMEYCGGG   96 (467)
T ss_pred             ccceeeeeeeccccceEEEEEechhhcchhhHHHHHHHHHHHhcCcchHHhhhhhe--------eecccHHHHHHHhcCc
Confidence            4899999  4444557777774    445667899999999999999999999965        6688999999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcc-----------cccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIG-----------RHVCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~-----------~~~~~~  124 (188)
                      ++...        +..+..++ ++++.||.|||..+       ..|+       +|++|||.+           +++||+
T Consensus        97 sv~~lL~~~~~~~E~~i~~il-re~l~~l~ylH~~~kiHrDIKaanil~s~~g~vkl~DfgVa~ql~~~~~rr~tfvGTP  175 (467)
T KOG0201|consen   97 SVLDLLKSGNILDEFEIAVIL-REVLKGLDYLHSEKKIHRDIKAANILLSESGDVKLADFGVAGQLTNTVKRRKTFVGTP  175 (467)
T ss_pred             chhhhhccCCCCccceeeeeh-HHHHHHhhhhhhcceecccccccceeEeccCcEEEEecceeeeeechhhccccccccc
Confidence            98875        34566677 89999999999988       4444       699999973           278999


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL  172 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  172 (188)
                      .|  ||||++.... |+.++||||||++.+||++|.||+....++..+
T Consensus       176 fw--MAPEVI~~~~-Y~~KADIWSLGITaiEla~GePP~s~~hPmrvl  220 (467)
T KOG0201|consen  176 FW--MAPEVIKQSG-YDTKADIWSLGITAIELAKGEPPHSKLHPMRVL  220 (467)
T ss_pred             cc--cchhhhcccc-ccchhhhhhhhHHHHHHhcCCCCCcccCcceEE
Confidence            99  9999999655 999999999999999999999999776654433

>cd05626 STKc_LATS2 Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor 2

Probab=99.96  E-value=3.3e-28  Score=197.26  Aligned_cols=160  Identities=16%  Similarity=0.190  Sum_probs=126.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+.+.   ..+..+.+.+|++++++++||||+++++++        .++...+++|||+++
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~l~~~~--------~~~~~~~lv~E~~~g   85 (381)
T cd05626          14 FGEVCLACKVDTHALYAMKTLRKKDVLNRNQVAHVKAERDILAEADNEWVVKLYYSF--------QDKDNLYFVMDYIPG   85 (381)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhcCCCCeeeeEEEE--------ecCCEEEEEEecCCC
Confidence            688887     2223334444332   223456788999999999999999999976        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||+|||+.+       |+|+       +||+|||++.               
T Consensus        86 g~L~~~l~~~~~~~e~~~~~~~-~qi~~aL~~LH~~givHrDlKp~Nili~~~~~~kL~DFGl~~~~~~~~~~~~~~~~~  164 (381)
T cd05626          86 GDMMSLLIRMEVFPEVLARFYI-AELTLAIESVHKMGFIHRDIKPDNILIDLDGHIKLTDFGLCTGFRWTHNSKYYQKGS  164 (381)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeeecCCcHHHEEECCCCCEEEeeCcCCcccccccccccccccc
Confidence            999775        34466677 79999999999998       5565       5999999742               


Q ss_pred             -------------------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         120 -------------------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       120 -------------------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                                                                 ..||..|  +|||++.+.. ++.++||||+||++|||
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y--~aPE~~~~~~-~~~~~DiwSlG~il~el  241 (381)
T cd05626         165 HIRQDSMEPSDLWDDVSNCRCGDRLKTLEQRATKQHQRCLAHSLVGTPNY--IAPEVLLRKG-YTQLCDWWSVGVILFEM  241 (381)
T ss_pred             cccccccCcccccccccccccccccchhhccccccccccccccccCCccc--cCHHHHcCCC-CCCccceeehhhHHHHH
Confidence                                                       3588899  9999998755 89999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHH
Q psy7174         157 LLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~  176 (188)
                      ++|++||.+.++......+.
T Consensus       242 ltG~~Pf~~~~~~~~~~~i~  261 (381)
T cd05626         242 LVGQPPFLAPTPTETQLKVI  261 (381)
T ss_pred             HhCCCCCcCCCHHHHHHHHH
Confidence            99999998877766655554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, LATS2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS functions as a tumor suppressor and is implicated in cell cycle regulation. LATS2 is an essential mitotic regulator responsible for coordinating accurate cytokinesis completion and governing the stabilization of other mitotic regulators. It is also critical in the maintenance of proper chromosome number, genomic stability, mitotic fidelity, and the integrity of centrosome duplication. Downregulation of LATS2 is associated with po

>KOG4279|consensus

Probab=99.96  E-value=1.8e-29  Score=209.25  Aligned_cols=140  Identities=23%  Similarity=0.300  Sum_probs=117.3

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----------HHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----------YSH   85 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----------~~~   85 (188)
                      ||-|-.......+.+..||.+.++|+|.|||+++|.|        .++...-|.||.++||+|+.+           ++.
T Consensus       605 IKEIpekdsr~~QPLhEEIaLH~~LrHkNIVrYLGs~--------senGf~kIFMEqVPGGSLSsLLrskWGPlKDNEst  676 (1226)
T KOG4279|consen  605 IKEIPEKDSREVQPLHEEIALHSTLRHKNIVRYLGSV--------SENGFFKIFMEQVPGGSLSSLLRSKWGPLKDNEST  676 (1226)
T ss_pred             eeecccccchhhccHHHHHHHHHHHhhHhHHHHhhcc--------CCCCeEEEEeecCCCCcHHHHHHhccCCCccchhH
Confidence            4444434455667788999999999999999999975        446688899999999999986           467


Q ss_pred             HHHHHHHHHHHHHHHHhhcC---------------CCCeEEEecCCccc-----------ccccccccCCCCccccc-cC
Q psy7174          86 LRYLENQQILEGLQALKSSM---------------PALLKKFVGIGIGR-----------HVCTLYCTRGAPELLFG-AR  138 (188)
Q Consensus        86 ~~~~~~~qi~~gl~~lH~~~---------------~~~ilkl~dfg~~~-----------~~~~~~y~~~aPe~~~~-~~  138 (188)
                      +.++. +||++||.|||++.               -+.++||+|||.++           +.||..|  ||||++.. .+
T Consensus       677 m~fYt-kQILeGLkYLHen~IVHRDIKGDNVLvNTySGvlKISDFGTsKRLAginP~TETFTGTLQY--MAPEvIDqG~R  753 (1226)
T KOG4279|consen  677 MNFYT-KQILEGLKYLHENKIVHRDIKGDNVLVNTYSGVLKISDFGTSKRLAGINPCTETFTGTLQY--MAPEVIDQGPR  753 (1226)
T ss_pred             HHHHH-HHHHHHhhhhhhcceeeccccCCcEEEeeccceEEecccccchhhccCCccccccccchhh--hChHhhccCCc
Confidence            88888 99999999999987               33447999999644           6789999  99999964 44


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         139 MYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      .|+.++|||||||++.||+||+|||....
T Consensus       754 GYG~aADIWS~GCT~vEMATGrPPF~Elg  782 (1226)
T KOG4279|consen  754 GYGKAADIWSFGCTMVEMATGRPPFVELG  782 (1226)
T ss_pred             CCCchhhhhhccceeEeeccCCCCeeecC
Confidence            69999999999999999999999997643

>KOG0032|consensus

Probab=99.95  E-value=8e-28  Score=193.79  Aligned_cols=172  Identities=23%  Similarity=0.279  Sum_probs=140.5

Q ss_pred             cccccc-----cCCccccccccccch---hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDV---NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~---~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.|+.     +++..++|.+.+...   ...+...+|+++|+++. |||||.++++|        .+....++|||+|.
T Consensus        48 Fg~v~~~~~~~tg~~~A~K~i~k~~~~~~~~~~~v~~Ev~il~~l~~hpniv~l~~~~--------e~~~~~~lvmEL~~  119 (382)
T KOG0032|consen   48 FGVVYLCREKSTGKEVACKVIPKRKLRGKEDREDVRREVAILQQLSGHPNIVQLKDAF--------EDPDSVYLVMELCE  119 (382)
T ss_pred             ceEEEEEEecCCCceeEEEEeehhhccccccHHHHHHHHHHHHhccCCCCEEEEEEEE--------EcCCeEEEEEEecC
Confidence            677776     344455666666322   24568999999999999 99999999986        45568899999999


Q ss_pred             cccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc----------c
Q psy7174          76 KTTKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR----------H  120 (188)
Q Consensus        76 ~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~----------~  120 (188)
                      ||.|.+.       +.....++ +|+++++.|||+.+       |+|+           +|++|||++.          .
T Consensus       120 GGeLfd~i~~~~~sE~da~~~~-~~il~av~~lH~~gvvHrDlKpEN~L~~~~~~~~~~ik~~DFGla~~~~~~~~~~~~  198 (382)
T KOG0032|consen  120 GGELFDRIVKKHYSERDAAGII-RQILEAVKYLHSLGVVHRDLKPENLLLASKDEGSGRIKLIDFGLAKFIKPGERLHTI  198 (382)
T ss_pred             CchHHHHHHHccCCHHHHHHHH-HHHHHHHHHHHhCCceeccCCHHHeeeccccCCCCcEEEeeCCCceEccCCceEeee
Confidence            9998764       23445566 89999999999998       4444           6999999854          5


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +||+.|  +|||++...+ |+..+||||+|+++|.|++|.+||.+.+......+|.+.-...+.+.||
T Consensus       199 ~Gtp~y--~APEvl~~~~-y~~~~DiWS~Gvi~yiLL~G~~PF~~~~~~~~~~~i~~~~~~f~~~~w~  263 (382)
T KOG0032|consen  199 VGTPEY--VAPEVLGGRP-YGDEVDVWSIGVILYILLSGVPPFWGETEFEIFLAILRGDFDFTSEPWD  263 (382)
T ss_pred             cCCccc--cCchhhcCCC-CCcccchhHHHHHHHHHhhCCCCCcCCChhHHHHHHHcCCCCCCCCCcc
Confidence            789999  9999998655 9999999999999999999999999999988888888776666777775

>cd05571 STKc_PKB Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B

Probab=99.95  E-value=3.4e-28  Score=193.07  Aligned_cols=160  Identities=15%  Similarity=0.131  Sum_probs=126.6

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+++.   ......++.+|++++++++||||+++++++        ..+...+++|||+.+
T Consensus         8 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~--------~~~~~~~lv~e~~~~   79 (323)
T cd05571           8 FGKVILVREKATGKYYAMKILKKEVIIAKDEVAHTLTESRVLQNTRHPFLTALKYSF--------QTHDRLCFVMEYANG   79 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCCEEEEE--------EcCCEEEEEEeCCCC
Confidence            788886     2333445555542   233446678999999999999999999875        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++...        +..+..++ .|++.||+|||+.+       |+||       +||+|||++.           ..||
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~~L~~lH~~~ivHrDlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~gt  158 (323)
T cd05571          80 GELFFHLSRERVFSEDRARFYG-AEIVSALGYLHSCDVVYRDLKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEeeCCCCcccccCCCcccceecC
Confidence            998764        34566676 79999999999998       5555       6999999754           3478


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      ..|  +|||++.+.. ++.++|+||+||++|||++|+.||.+.+.......+.
T Consensus       159 ~~y--~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~~~  208 (323)
T cd05571         159 PEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  208 (323)
T ss_pred             ccc--cChhhhcCCC-CCccccCcccchhhhhhhcCCCCCCCCCHHHHHHHHH
Confidence            899  9999998755 8999999999999999999999998877665555553

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. It is activated downstream of PI3K and plays important roles in diverse cellular functions including cell survival, growth, proliferation, angiogenesis, motility, and migration. PKB also has a central role in a variety of human cancers, having be

>KOG0580|consensus

Probab=99.95  E-value=5.4e-29  Score=183.61  Aligned_cols=162  Identities=18%  Similarity=0.215  Sum_probs=132.7

Q ss_pred             cccccc-c---CCcc-cccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q---SKWS-PNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~---~~~~-~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||+||. .   +.+. ++|.+-+.   .....+++.||++|.+.|+||||++++++|        .++...|+++||.++
T Consensus        35 FG~vYlarekks~~IvalKVlfKsqi~~~~v~~qlrREiEIqs~L~hpnilrlY~~f--------hd~~riyLilEya~~  106 (281)
T KOG0580|consen   35 FGNVYLAREKKSLFIVALKVLFKSQILKTQVEHQLRREIEIQSHLRHPNILRLYGYF--------HDSKRIYLILEYAPR  106 (281)
T ss_pred             cccEeEeeeccCCcEEEEeeeeHHHHHHhcchhhhhheeEeecccCCccHHhhhhhe--------eccceeEEEEEecCC
Confidence            899998 2   2222 24444442   344556789999999999999999999986        567789999999999


Q ss_pred             ccHHHHHH----------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------cccc
Q psy7174          77 TTKARFYS----------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVCT  123 (188)
Q Consensus        77 ~~l~~~~~----------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~  123 (188)
                      |++.....          ....++ +|++.||.|+|..+       |+|+       +|++|||.+.         .+||
T Consensus       107 gel~k~L~~~~~~~f~e~~~a~Yi-~q~A~Al~y~h~k~VIhRdiKpenlLlg~~~~lkiAdfGwsV~~p~~kR~tlcgt  185 (281)
T KOG0580|consen  107 GELYKDLQEGRMKRFDEQRAATYI-KQLANALLYCHLKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSNKRKTLCGT  185 (281)
T ss_pred             chHHHHHHhcccccccccchhHHH-HHHHHHHHHhccCCcccCCCCHHHhccCCCCCeeccCCCceeecCCCCceeeecc
Confidence            99877532          344566 79999999999998       6666       5999999743         6789


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .-|  .+||...+.. ++..+|+|++|++.||++.|.+||.+.+..+..++|.+.
T Consensus       186 ~dy--l~pEmv~~~~-hd~~Vd~w~lgvl~yeflvg~ppFes~~~~etYkrI~k~  237 (281)
T KOG0580|consen  186 LDY--LPPEMVEGRG-HDKFVDLWSLGVLCYEFLVGLPPFESQSHSETYKRIRKV  237 (281)
T ss_pred             ccc--CCHhhcCCCC-ccchhhHHHHHHHHHHHHhcCCchhhhhhHHHHHHHHHc
Confidence            999  9999998865 999999999999999999999999999888888888654

>cd05598 STKc_LATS Catalytic domain of the Protein Serine/Threonine Kinase, Large Tumor Suppressor

Probab=99.95  E-value=2.2e-28  Score=197.83  Aligned_cols=160  Identities=16%  Similarity=0.208  Sum_probs=125.9

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|++++++++||||+++++.|        .++...+++|||+++
T Consensus        14 ~g~V~~a~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~--------~~~~~~~lv~E~~~~   85 (376)
T cd05598          14 FGEVCLVRKVDTNALYAMKTLRKADVLMRNQAAHVKAERDILAEADNEWVVKLYYSF--------QDKDNLYFVMDYIPG   85 (376)
T ss_pred             CeEEEEEEECCCCCEEEEEEEcHHHHHhhhhHHHHHHHHHHHHhCCCCCcceEEEEE--------EcCCEEEEEEeCCCC
Confidence            678887 2    223334433331   123346678999999999999999999975        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||+|||+++       |+|+       +||+|||++.               
T Consensus        86 g~L~~~i~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~ikL~DFG~a~~~~~~~~~~~~~~~~  164 (376)
T cd05598          86 GDMMSLLIRLGIFEEDLARFYI-AELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQKGD  164 (376)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeCCCCHHHEEECCCCCEEEEeCCCCcccccccccccccccc
Confidence            999875        24456666 79999999999988       5555       6999999742               


Q ss_pred             ---------------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCC
Q psy7174         120 ---------------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKA  160 (188)
Q Consensus       120 ---------------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~  160 (188)
                                                             ..||..|  +|||++.+.. ++.++||||+||++|+|++|+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlGvilyell~G~  241 (376)
T cd05598         165 HHRQDSMEPSEEWSEIDRCRLKPLERRRKRQHQRCLAHSLVGTPNY--IAPEVLLRTG-YTQLCDWWSVGVILYEMLVGQ  241 (376)
T ss_pred             ccccccccccccccccccccccchhhhhhhhcccccccccCCCccc--cCHHHHcCCC-CCcceeeeeccceeeehhhCC
Confidence                                                   3588899  9999998765 899999999999999999999


Q ss_pred             CCCCCCChHHHHHHHH
Q psy7174         161 PFLPGESDLDQLTRIF  176 (188)
Q Consensus       161 ~pf~~~~~~~~~~~i~  176 (188)
                      .||.+.+..+....+.
T Consensus       242 ~Pf~~~~~~~~~~~i~  257 (376)
T cd05598         242 PPFLADTPAETQLKVI  257 (376)
T ss_pred             CCCCCCCHHHHHHHHh
Confidence            9999888766655554

Serine/Threonine Kinases (STKs), Large Tumor Suppressor (LATS) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The LATS subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. LATS was originally identified in Drosophila using a screen for genes whose inactivation led to overproliferation of cells. In tetrapods, there are two LATS isoforms, LATS1 and LATS2. Inactivation of LATS1 in mice results in the development of various tumors, including sarcomas and ovarian cancer. LATS functions as a tumor suppressor and is implicated in cell cycle regulation.

>cd05585 STKc_YPK1_like Catalytic domain of Yeast Protein Kinase 1-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=7.3e-28  Score=190.27  Aligned_cols=162  Identities=20%  Similarity=0.262  Sum_probs=128.0

Q ss_pred             ccccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           4 VCFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         4 ~~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      -||.||+ .    ++..++|.+++.   .......+.+|++++++++||||+++++++        .++...++++||+.
T Consensus         5 ~~g~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~   76 (312)
T cd05585           5 SFGKVMQVRKRDTQRIYALKTIRKAHIVSRSEVTHTLAERTVLAQVNCPFIVPLKFSF--------QSPEKLYLVLAFIN   76 (312)
T ss_pred             CCeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCcEeceeeEE--------ecCCeEEEEEcCCC
Confidence            3788887 2    233345555442   234456678999999999999999999875        44678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..|
T Consensus        77 ~g~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~HrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  155 (312)
T cd05585          77 GGELFHHLQREGRFDLSRARFYT-AELLCALENLHKFNVIYRDLKPENILLDYQGHIALCDFGLCKLNMKDDDKTNTFCG  155 (312)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEeCCCCHHHeEECCCCcEEEEECcccccCccCCCccccccC
Confidence            9999765        34566667 79999999999988       5555       6999999754           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++||||+||++|+|++|++||.+.+..+....+..
T Consensus       156 t~~y--~aPE~~~~~~-~~~~~DvwslGvil~el~tg~~pf~~~~~~~~~~~~~~  207 (312)
T cd05585         156 TPEY--LAPELLLGHG-YTKAVDWWTLGVLLYEMLTGLPPFYDENVNEMYRKILQ  207 (312)
T ss_pred             Cccc--CCHHHHcCCC-CCCccceechhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence            8899  9999998755 89999999999999999999999988777666665543

Serine/Threonine Kinases (STKs), Yeast protein kinase 1 (YPK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YPK1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the AGC STKs, Saccharomyces cerevisiae YPK1 and Schizosaccharomyces pombe Gad8p. YPK1 is required for cell growth and acts as a downstream kinase in the sphingolipid-mediated signaling pathway of yeast. It also plays a role in efficient endocytosis and in the maintenance of cell wall integrity. Gad8p is a downstream target of Tor1p, the fission yeast homolog of mTOR. It pl

>KOG0669|consensus

Probab=99.95  E-value=1.5e-28  Score=183.07  Aligned_cols=181  Identities=24%  Similarity=0.458  Sum_probs=148.5

Q ss_pred             cccccc--cCCccccccccccchh-----hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ--QSKWSPNTPMARCDVN-----VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~~~~-----~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+  ..+....+++++.-.+     .-..+.+|+++|+.|+|+|++.++++|.....++.-.....++|+++|...
T Consensus        30 fgeVFkAr~~n~~kkvalkkvlmeneKeGfpitalreikiL~~lkHenv~nliEic~tk~Tp~~r~r~t~ylVf~~cehD  109 (376)
T KOG0669|consen   30 FGEVFKARSKNTGKKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKATPTNRDRATFYLVFDFCEHD  109 (376)
T ss_pred             HHHHHHHhhcCccchhHHHHHHHhccccCCcHHHHHHHHHHHHhcchhHHHHHHHHhhccCCcccccceeeeeHHHhhhh
Confidence            778888  2222224455553222     224578999999999999999999999777766666667789999999754


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CC-------CeEEEecCCccc---------------c
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PA-------LLKKFVGIGIGR---------------H  120 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~-------~ilkl~dfg~~~---------------~  120 (188)
                      ....+        ...+..++ +++++||.|+|++.       +.       .++|++|||+++               .
T Consensus       110 LaGlLsn~~vr~sls~Ikk~M-k~Lm~GL~~iHr~kilHRDmKaaNvLIt~dgilklADFGlar~fs~~~n~~kprytnr  188 (376)
T KOG0669|consen  110 LAGLLSNRKVRFSLSEIKKVM-KGLMNGLYYIHRNKILHRDMKAANVLITKDGILKLADFGLARAFSTSKNVVKPRYTNR  188 (376)
T ss_pred             HHHHhcCccccccHHHHHHHH-HHHHHHHHHHHHhhHHhhcccHhhEEEcCCceEEeeccccccceecccccCCCCcccc
Confidence            43332        56788999 99999999999987       33       447999999864               2


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +-|.||  ++||.+.+.+.|+++.|+|..|||+.||+++.+.+++....+++..|.+.+|.-.++-||
T Consensus       189 vvTLwY--rppEllLG~r~yg~~iDiWgAgCimaeMwtrspimqgnteqqql~~Is~LcGs~tkevWP  254 (376)
T KOG0669|consen  189 VVTLWY--RPPELLLGDREYGPPIDIWGAGCIMAEMWTRSPIMQGNTEQQQLHLISQLCGSITKEVWP  254 (376)
T ss_pred             eeeeec--CCHHHhhcccccCCcchhHhHHHHHHHHHccCccccCChHHHHHHHHHHHhccCCcccCC
Confidence            337899  999999999899999999999999999999999999999999999999999999999998

>cd07859 STKc_TDY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants

Probab=99.95  E-value=8.1e-28  Score=191.35  Aligned_cols=173  Identities=25%  Similarity=0.371  Sum_probs=126.8

Q ss_pred             cccccc-cC----Ccccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .+    +..++|.++..  ......++.+|++++++++||||+++++++...   ...+....++++||+. +
T Consensus        13 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~---~~~~~~~~~lv~e~~~-~   88 (338)
T cd07859          13 YGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPP---SRREFKDIYVVFELME-S   88 (338)
T ss_pred             CeEEEEEEECCCCCEEEEEEechhhccchhHHHHHHHHHHHHhCCCCCEeeecceEecc---CCCCCceEEEEEecCC-C
Confidence            677887 22    22334443322  223445688999999999999999999986321   1122345799999996 4


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------cc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------HV  121 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~  121 (188)
                      ++..+        +..+..++ .|+++||.|||+.+       |+|+       +||+|||++.              ..
T Consensus        89 ~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  167 (338)
T cd07859          89 DLHQVIKANDDLTPEHHQFFL-YQLLRALKYIHTANVFHRDLKPKNILANADCKLKICDFGLARVAFNDTPTAIFWTDYV  167 (338)
T ss_pred             CHHHHHHhcccCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEccCccccccccccCccccccCCC
Confidence            55543        34566677 89999999999998       4454       6999999754              24


Q ss_pred             ccccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         122 CTLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ++..|  +|||++.+. ..++.++||||+||++|+|++|++||.+.+....+..+....+.|++
T Consensus       168 ~t~~y--~aPE~~~~~~~~~~~~~DvwSlGvvl~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~  229 (338)
T cd07859         168 ATRWY--RAPELCGSFFSKYTPAIDIWSIGCIFAEVLTGKPLFPGKNVVHQLDLITDLLGTPSP  229 (338)
T ss_pred             CCCCc--CCHHHHhccccccCchhHHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            77889  999998652 24899999999999999999999999998877777766666665543

Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved phos

>cd07872 STKc_PCTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-2 kinase

Probab=99.95  E-value=1.4e-27  Score=188.27  Aligned_cols=173  Identities=31%  Similarity=0.503  Sum_probs=132.7

Q ss_pred             cccccc-cC----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ ..    +..++|.++.. .......+.+|++++++++||||+++++++        ..+...++++||+.+..
T Consensus        19 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~l   90 (309)
T cd07872          19 YATVFKGRSKLTENLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDIV--------HTDKSLTLVFEYLDKDL   90 (309)
T ss_pred             CEEEEEEEecCCCCeEEEEEeeccccCCcchhHHHHHHHHHhCCCCCcceEEEEE--------eeCCeEEEEEeCCCCCH
Confidence            677887 22    22334444332 222334678899999999999999999975        44567899999998644


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      ...+        ...+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..++..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~qi~~aL~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  169 (309)
T cd07872          91 KQYMDDCGNIMSMHNVKIFL-YQILRGLAYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSVPTKTYSNEVVTLW  169 (309)
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECccccceecCCCcccccccccccc
Confidence            3332        23455566 79999999999988       5555       6999999754           235678


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||.+.+...++.++|+||+||++|+|++|++||.+.+..+.+..+.+..+.|.++.||
T Consensus       170 y--~aPE~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  230 (309)
T cd07872         170 Y--RPPDVLLGSSEYSTQIDMWGVGCIFFEMASGRPLFPGSTVEDELHLIFRLLGTPTEETWP  230 (309)
T ss_pred             c--cCCHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCCHHHHh
Confidence            9  999998765558999999999999999999999999998888888888888888777665

Serine/Threonine Kinases (STKs), PCTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-2 is specifically expressed in neurons in the central nervous system, mainly in terminally differentiated neurons. It associates with Trap (Tudor repeat associator with PCTAIRE-2) and could play

>PTZ00426 cAMP-dependent protein kinase catalytic subunit; Provisional

Probab=99.95  E-value=6.8e-28  Score=192.81  Aligned_cols=141  Identities=21%  Similarity=0.226  Sum_probs=118.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|+++++.++||||+++++++        .++...+++|||+.+|+|..+.        ..+..++ .|++.|
T Consensus        73 ~~~~~~~~E~~~l~~l~hp~Iv~~~~~~--------~~~~~~~lv~Ey~~~g~L~~~i~~~~~~~~~~~~~~~-~qi~~a  143 (340)
T PTZ00426         73 KQVDHVFSERKILNYINHPFCVNLYGSF--------KDESYLYLVLEFVIGGEFFTFLRRNKRFPNDVGCFYA-AQIVLI  143 (340)
T ss_pred             hhHHHHHHHHHHHHhCCCCCCcceEEEE--------EeCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHH
Confidence            3456788999999999999999999986        4466789999999999998752        3455666 899999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~e  155 (188)
                      |.|||+.+       |+|+       +||+|||++.        ..||+.|  +|||++.+.. ++.++|+||+||++|+
T Consensus       144 L~~LH~~~ivHrDLkp~NILl~~~~~ikL~DFG~a~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlGvil~e  220 (340)
T PTZ00426        144 FEYLQSLNIVYRDLKPENLLLDKDGFIKMTDFGFAKVVDTRTYTLCGTPEY--IAPEILLNVG-HGKAADWWTLGIFIYE  220 (340)
T ss_pred             HHHHHHCCeEccCCCHHHEEECCCCCEEEecCCCCeecCCCcceecCChhh--cCHHHHhCCC-CCccccccchhhHHHH
Confidence            99999988       5555       6999999864        3578889  9999998755 8999999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHhh
Q psy7174         156 LLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       156 l~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |++|.+||.+.++......+...
T Consensus       221 ll~G~~Pf~~~~~~~~~~~i~~~  243 (340)
T PTZ00426        221 ILVGCPPFYANEPLLIYQKILEG  243 (340)
T ss_pred             HhcCCCCCCCCCHHHHHHHHhcC
Confidence            99999999988877777666554

>PTZ00263 protein kinase A catalytic subunit; Provisional

Probab=99.95  E-value=5.5e-28  Score=192.37  Aligned_cols=161  Identities=13%  Similarity=0.187  Sum_probs=127.6

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        31 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~  102 (329)
T PTZ00263         31 FGRVRIAKHKGTGEYYAIKCLKKREILKMKQVQHVAQEKSILMELSHPFIVNMMCSF--------QDENRVYFLLEFVVG  102 (329)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCcEEEEE--------EcCCEEEEEEcCCCC
Confidence            677886     2233445555442   223456788999999999999999999975        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      ++|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.        ..|+..|
T Consensus       103 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y  181 (329)
T PTZ00263        103 GELFTHLRKAGRFPNDVAKFYH-AELVLAFEYLHSKDIIYRDLKPENLLLDNKGHVKVTDFGFAKKVPDRTFTLCGTPEY  181 (329)
T ss_pred             ChHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCCHHHEEECCCCCEEEeeccCceEcCCCcceecCChhh
Confidence            998765        23455666 79999999999998       5555       6999999854        3578889


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        +|||++.+.. ++.++|+|||||++|+|++|..||.+.+..+....+..
T Consensus       182 --~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~  229 (329)
T PTZ00263        182 --LAPEVIQSKG-HGKAVDWWTMGVLLYEFIAGYPPFFDDTPFRIYEKILA  229 (329)
T ss_pred             --cCHHHHcCCC-CCCcceeechHHHHHHHHcCCCCCCCCCHHHHHHHHhc
Confidence              9999998765 89999999999999999999999988877766666643

>cd05612 STKc_PRKX_like Catalytic domain of PRKX-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=8.4e-28  Score=188.12  Aligned_cols=161  Identities=17%  Similarity=0.221  Sum_probs=125.9

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...   ..+..+.+.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~   85 (291)
T cd05612          14 FGRVHLVRDRISEHYYALKVMAIPEVIRLKQEQHVHNEKRVLKEVSHPFIIRLFWTE--------HDQRFLYMLMEYVPG   85 (291)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHHhhhHHHHHHHHHHHHHHhCCCCcHhhhHhhh--------ccCCeEEEEEeCCCC
Confidence            677887 2    233334443321   223456688999999999999999999864        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      ++|..+        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.        ..|++.|
T Consensus        86 ~~L~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y  164 (291)
T cd05612          86 GELFSYLRNSGRFSNSTGLFYA-SEIVCALEYLHSKEIVYRDLKPENILLDKEGHIKLTDFGFAKKLRDRTWTLCGTPEY  164 (291)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEEecCcchhccCCcccccCChhh
Confidence            998775        23455566 79999999999998       5555       6999999854        3578889


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        +|||++.+.. ++.++||||+||++|+|++|+.||.+.+.......+..
T Consensus       165 --~aPE~~~~~~-~~~~~DiwSlG~il~~l~~g~~pf~~~~~~~~~~~i~~  212 (291)
T cd05612         165 --LAPEVIQSKG-HNKAVDWWALGILIYEMLVGYPPFFDDNPFGIYEKILA  212 (291)
T ss_pred             --cCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence              9999998755 89999999999999999999999988877666666544

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, PRKX-like kinases, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include human PRKX (X chromosome-encoded protein kinase), Drosophila DC2, and similar proteins. PRKX is present in many tissues including fetal and adult brain, kidney, and lung. The PRKX gene is located in the Xp22.3 subregion and has a homolog called PRKY on the Y chromosome. An abnormal interchange between PRKX aand PRKY leads to the sex reversal disorder of XX males and XY females. PRKX is implicated in granulocyt

>cd07862 STKc_CDK6 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6

Probab=99.95  E-value=1.8e-27  Score=185.67  Aligned_cols=176  Identities=26%  Similarity=0.500  Sum_probs=132.2

Q ss_pred             cccccc-cC-----Ccccccccccc--chhhhhHHHHHHHHHHhC---CCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QS-----KWSPNTPMARC--DVNVETQAKAEGKQDRRL---DYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~-----~~~~~~~i~~~--~~~~~~~~~~E~~il~~l---~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .+     +..++|.++..  .........+|+.+++.+   +||||++++++|...   ....+...++++|+
T Consensus        14 ~g~Vy~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~hpniv~~~~~~~~~---~~~~~~~~~lv~e~   90 (290)
T cd07862          14 YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS---RTDRETKLTLVFEH   90 (290)
T ss_pred             CeEEEEEEEcCCCCeEEEEEEEecccCCCCchHHHHHHHHHHHhhcccCCCCcceEEEEEecc---cCCCCCcEEEEEcc
Confidence            788887 22     22334433322  122334567788887766   599999999986321   12234568999999


Q ss_pred             cccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          74 FTKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        74 ~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      +.+ ++..+          +..+..++ .|+++||.|||+.+       |+|+       +|++|||++.          
T Consensus        91 ~~~-~l~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~iiH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~  168 (290)
T cd07862          91 VDQ-DLTTYLDKVPEPGVPTETIKDMM-FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS  168 (290)
T ss_pred             CCC-CHHHHHHhCCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCCHHHEEEcCCCCEEEccccceEeccCCccccc
Confidence            975 55443          23456666 89999999999998       5555       6999999754          


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..++..|  +|||.+.+.. ++.++|+||+||++|||++|++||.+.++.+.+..|....+.|.+..||
T Consensus       169 ~~~~~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~i~~~~~~~~~~~~~  234 (290)
T cd07862         169 VVVTLWY--RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  234 (290)
T ss_pred             ccccccc--cChHHHhCCC-CCCccchHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhch
Confidence            3467889  9999997755 8999999999999999999999999999999999999988888887775

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cytopla

>cd05599 STKc_NDR_like Catalytic domain of Nuclear Dbf2-Related kinase-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=3.7e-28  Score=195.56  Aligned_cols=161  Identities=15%  Similarity=0.213  Sum_probs=127.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+++.   .....+.+.+|+++++.++||||++++++|        .++...+++|||+.+
T Consensus        14 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~l~h~~iv~~~~~~--------~~~~~~~lv~E~~~~   85 (364)
T cd05599          14 FGEVRLVQKKDTGHIYAMKKLRKSEMLEKEQVAHVRAERDILAEADNPWVVKLYYSF--------QDENYLYLIMEYLPG   85 (364)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE--------EcCCeEEEEECCCCC
Confidence            678886 2    233334444432   123345678899999999999999999975        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||+|||+.+       |+|+       +|++|||++.               
T Consensus        86 g~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  164 (364)
T cd05599          86 GDMMTLLMKKDTFTEEETRFYI-AETILAIDSIHKLGYIHRDIKPDNLLLDAKGHIKLSDFGLCTGLKKSHRTEFYRILS  164 (364)
T ss_pred             cHHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEeecccceecccccccccccccc
Confidence            999875        34566777 89999999999998       5555       5999999753               


Q ss_pred             ----------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         120 ----------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       120 ----------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                                                        .+||+.|  +|||++.... ++.++||||+||++|||++|.+||.+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlG~il~el~~G~~Pf~~  241 (364)
T cd05599         165 HALPSNFLDFISKPMSSKRKAETWKRNRRALAYSTVGTPDY--IAPEVFLQTG-YNKECDWWSLGVIMYEMLVGYPPFCS  241 (364)
T ss_pred             ccccccccccccccccccccccchhhcccccccccccCccc--cCHHHHcCCC-CCCeeeeecchhHHHHhhcCCCCCCC
Confidence                                              2478899  9999997755 89999999999999999999999998


Q ss_pred             CChHHHHHHHHh
Q psy7174         166 ESDLDQLTRIFQ  177 (188)
Q Consensus       166 ~~~~~~~~~i~~  177 (188)
                      .+..+....+..
T Consensus       242 ~~~~~~~~~i~~  253 (364)
T cd05599         242 DNPQETYRKIIN  253 (364)
T ss_pred             CCHHHHHHHHHc
Confidence            887777666654

Serine/Threonine Kinases (STKs), Nuclear Dbf2-Related (NDR) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. NDR kinases regulate mitosis, cell growth, embryonic development, and neurological processes. They are also required for proper centrosome duplica

>cd07848 STKc_CDKL5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase Like 5

Probab=99.95  E-value=6.4e-28  Score=187.90  Aligned_cols=165  Identities=28%  Similarity=0.421  Sum_probs=127.5

Q ss_pred             cccccc-cC----Ccccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ ..    +..++|.++..  .....+.+.+|++++++++||||++++++|        ..+...++++||+.++
T Consensus        14 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~   85 (287)
T cd07848          14 YGVVLKCRHKETKEIVAIKKFKDSEENEEVKETTLRELKMLRTLKQENIVELKEAF--------RRRGKLYLVFEYVEKN   85 (287)
T ss_pred             CEEEEEEEECCCCcEEEEEEEecccccccchhhHHHHHHHHHhCCCccccchhhhE--------ecCCEEEEEEecCCCC
Confidence            667776 22    22234433332  223456788999999999999999999975        4466889999999998


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCT  123 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~  123 (188)
                      ++..+        +..+..++ .|++.||.|||+.+       |+|+       +||+|||++.            ..++
T Consensus        86 ~l~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~~i~H~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  164 (287)
T cd07848          86 MLELLEEMPNGVPPEKVRSYI-YQLIKAIHWCHKNDIVHRDIKPENLLISHNDVLKLCDFGFARNLSEGSNANYTEYVAT  164 (287)
T ss_pred             HHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccCcccccccccccccccccc
Confidence            87764        23466677 89999999999988       4554       6999999754            2467


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      ..|  +|||++.+.. ++.++|+||+||++|+|++|++||.+.+..+.+..+.+..+.
T Consensus       165 ~~y--~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~pf~~~~~~~~~~~~~~~~~~  219 (287)
T cd07848         165 RWY--RSPELLLGAP-YGKAVDMWSVGCILGELSDGQPLFPGESEIDQLFTIQKVLGP  219 (287)
T ss_pred             ccc--CCcHHHcCCC-CCCchhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhhCC
Confidence            789  9999998765 899999999999999999999999998877777766655443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 5 (CDKL5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Mutations in the gene encoding CDKL5, previously called STK9, are associated with early onset epilepsy and severe mental retardation [X-linked infantile spasm syndrome (ISSX) or West syndrome]. In addition, CDKL5 mutations also sometimes

>KOG4250|consensus

Probab=99.95  E-value=4.1e-28  Score=201.06  Aligned_cols=156  Identities=17%  Similarity=0.199  Sum_probs=127.5

Q ss_pred             cccccc-cCCccc-ccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||+||+ .++... .+|+|.+    ....++.+-+|+++|++++|||||+++++--+..  ...-.+...++||||++|+
T Consensus        26 ~g~V~rgrnketG~~vAvK~~~~~~~~r~~e~~~~EieilkKLnh~NIVk~f~iee~~~--~~~~~~~~vlvmEyC~gGs  103 (732)
T KOG4250|consen   26 FGNVYRGRNKETGRLVAVKTFNKESSLRPRERWCREIEILKKLNHPNIVKLFDIEETKF--LGLVTRLPVLVMEYCSGGS  103 (732)
T ss_pred             cceeeeecccccccchhHHhhhhhcccchHHHHHHHHHHHHHcCchhhhhhcccCCccc--cCcccccceEEEeecCCCc
Confidence            789998 556555 6666664    4667788999999999999999999999721110  0222556799999999999


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCeE-----------EEecCCccc----------
Q psy7174          79 KARF-----------YSHLRYLENQQILEGLQALKSSM-------PALLK-----------KFVGIGIGR----------  119 (188)
Q Consensus        79 l~~~-----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~il-----------kl~dfg~~~----------  119 (188)
                      |...           +.++..++ .+++.||.|||.++       |+||+           ||+|||.++          
T Consensus       104 L~~~L~~PEN~~GLpE~e~l~lL-~d~~~al~~LrEn~IvHRDlKP~NIvl~~Gedgq~IyKLtDfG~Arel~d~s~~~S  182 (732)
T KOG4250|consen  104 LRKVLNSPENAYGLPESEFLDLL-SDLVSALRHLRENGIVHRDLKPGNIVLQIGEDGQSIYKLTDFGAARELDDNSLFTS  182 (732)
T ss_pred             HHHHhcCcccccCCCHHHHHHHH-HHHHHHHHHHHHcCceeccCCCCcEEEeecCCCceEEeeecccccccCCCCCeeee
Confidence            9986           45677777 89999999999988       88884           999999754          


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      .+||..|  ++||+.-..+.|+.-+|.||+||++|+.+||..||..
T Consensus       183 ~vGT~~Y--LhPel~E~q~~y~~tVDLWS~GvtlY~caTG~lPF~p  226 (732)
T KOG4250|consen  183 LVGTEEY--LHPELYERQKKYTATVDLWSFGVTLYECATGELPFIP  226 (732)
T ss_pred             ecCchhh--cChHHHhhccCcCceeehhhhhhHHHHHhccCCCCCc
Confidence            7899999  9999997544599999999999999999999999843

>cd05595 STKc_PKB_beta Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B beta

Probab=99.95  E-value=1.9e-27  Score=188.87  Aligned_cols=160  Identities=14%  Similarity=0.139  Sum_probs=125.4

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   .......+.+|+++++.++||||++++++|        ..+...+++|||+.+
T Consensus         8 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~i~~~~~~~--------~~~~~~~lv~E~~~~   79 (323)
T cd05595           8 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF--------QTHDRLCFVMEYANG   79 (323)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCcceeeEE--------ecCCEEEEEEeCCCC
Confidence            788887 2    233345544432   223445677899999999999999999875        445678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++...        +..+..++ .|++.||.|||+++       |+||       +||+|||++.           ..|+
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~gt  158 (323)
T cd05595          80 GELFFHLSRERVFTEERARFYG-AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  158 (323)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHEEEcCCCCEEecccHHhccccCCCCccccccCC
Confidence            998764        34566666 79999999999998       5555       6999999743           3478


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      ..|  +|||.+.+.. ++.++|+||+||++|+|++|+.||.+.+.......+.
T Consensus       159 ~~y--~aPE~~~~~~-~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~~~  208 (323)
T cd05595         159 PEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELIL  208 (323)
T ss_pred             cCc--CCcccccCCC-CCchhchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            899  9999997755 8999999999999999999999998877666655554

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, beta (or Akt2) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-beta is the predominant PKB isoform expressed in insulin-responsive tissues. It plays a critical role in the regulation of glucose homeostasis. It is also implicated in muscle cell differentiation. Mice deficient in

>PTZ00267 NIMA-related protein kinase; Provisional

Probab=99.95  E-value=4.2e-27  Score=196.02  Aligned_cols=144  Identities=22%  Similarity=0.224  Sum_probs=118.4

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH------------HHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF------------YSHLRYLEN   91 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~------------~~~~~~~~~   91 (188)
                      .......+.+|+++|+.++||||++++++|        ..+...+++|||+.+|+|...            +..+..++ 
T Consensus       105 ~~~~~~~~~~E~~~l~~l~Hpniv~~~~~~--------~~~~~~~lv~E~~~gg~L~~~l~~~~~~~~~l~~~~~~~i~-  175 (478)
T PTZ00267        105 DERQAAYARSELHCLAACDHFGIVKHFDDF--------KSDDKLLLIMEYGSGGDLNKQIKQRLKEHLPFQEYEVGLLF-  175 (478)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeEEEEEE--------EECCEEEEEEECCCCCCHHHHHHHHHhccCCCCHHHHHHHH-
Confidence            334445678899999999999999999976        446789999999999999753            23455566 


Q ss_pred             HHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccccccCCCCccccccCCCCchh
Q psy7174          92 QQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLYCTRGAPELLFGARMYGVGI  144 (188)
Q Consensus        92 ~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~  144 (188)
                      .|++.||.|||+.+       |+||       +||+|||++.             ..||+.|  +|||++.+.. ++.++
T Consensus       176 ~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~~kL~DFgla~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~  252 (478)
T PTZ00267        176 YQIVLALDEVHSRKMMHRDLKSANIFLMPTGIIKLGDFGFSKQYSDSVSLDVASSFCGTPYY--LAPELWERKR-YSKKA  252 (478)
T ss_pred             HHHHHHHHHHHhCCEEECCcCHHhEEECCCCcEEEEeCcCceecCCccccccccccCCCccc--cCHhHhCCCC-CCcHH
Confidence            79999999999988       6666       6999999854             2378889  9999997755 89999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         145 DMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       145 DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      ||||+||++|+|++|+.||.+.+..+.+..+....
T Consensus       253 Dv~slG~~l~el~tg~~Pf~~~~~~~~~~~~~~~~  287 (478)
T PTZ00267        253 DMWSLGVILYELLTLHRPFKGPSQREIMQQVLYGK  287 (478)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            99999999999999999998887777666665443

>KOG4278|consensus

Probab=99.95  E-value=1.7e-27  Score=195.70  Aligned_cols=174  Identities=16%  Similarity=0.202  Sum_probs=141.4

Q ss_pred             ccccccc--cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           4 VCFKPFQ--QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         4 ~~g~v~~--~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      .+|.||.  ..||..-+|+|-.  +.-..++|++|+.+|+.++|||+|+++|+|        ..+...||+.|||+.|+|
T Consensus       279 QYGeVYeGvWKkyslTvAVKtLKEDtMeveEFLkEAAvMKeikHpNLVqLLGVC--------T~EpPFYIiTEfM~yGNL  350 (1157)
T KOG4278|consen  279 QYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC--------THEPPFYIITEFMCYGNL  350 (1157)
T ss_pred             cccceeeeeeeccceeeehhhhhhcchhHHHHHHHHHHHHhhcCccHHHHhhhh--------ccCCCeEEEEecccCccH
Confidence            3677887  6677664444432  334568899999999999999999999998        345678999999999999


Q ss_pred             HHHHH---------HHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCccccccc------------c
Q psy7174          80 ARFYS---------HLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHVCT------------L  124 (188)
Q Consensus        80 ~~~~~---------~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~~~~------------~  124 (188)
                      .+++.         .+..+++.||..||+||..++              -++++|++|||+++...-            .
T Consensus       351 LdYLRecnr~ev~avvLlyMAtQIsSaMeYLEkknFIHRDLAARNCLVgEnhiVKvADFGLsRlMtgDTYTAHAGAKFPI  430 (1157)
T KOG4278|consen  351 LDYLRECNRSEVPAVVLLYMATQISSAMEYLEKKNFIHRDLAARNCLVGENHIVKVADFGLSRLMTGDTYTAHAGAKFPI  430 (1157)
T ss_pred             HHHHHHhchhhcchhHHHHHHHHHHHHHHHHHHhhhhhhhhhhhhccccccceEEeeccchhhhhcCCceecccCccCcc
Confidence            88742         244455589999999997766              567899999999874322            2


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .+  .|||.+.... ++.++|||+||++|||+++ |..||.|.+..+.+..+...++.--|+.||
T Consensus       431 KW--TAPEsLAyNt-FSiKSDVWAFGVLLWEIATYGMsPYPGidlSqVY~LLEkgyRM~~PeGCP  492 (1157)
T KOG4278|consen  431 KW--TAPESLAYNT-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYGLLEKGYRMDGPEGCP  492 (1157)
T ss_pred             cc--cCcccccccc-cccchhhHHHHHHHHHHHhcCCCCCCCccHHHHHHHHhccccccCCCCCC
Confidence            34  7999987655 8999999999999999996 999999999999999999999998899887

>cd05600 STKc_Sid2p_Dbf2p Catalytic domain of Fungal Sid2p- and Dbf2p-like Protein Serine/Threonine Kinases

Probab=99.95  E-value=1.4e-27  Score=190.13  Aligned_cols=161  Identities=18%  Similarity=0.282  Sum_probs=128.0

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   ..+..+.+.+|+++++.++||||+++++++        .++...+++|||+.+
T Consensus        14 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~iv~~~~~~--------~~~~~~~lv~e~~~g   85 (333)
T cd05600          14 YGQVFLAKKKDTGEIVALKRMKKSLLFKLNEVRHVLTERDILTTTKSEWLVKLLYAF--------QDDEYLYLAMEYVPG   85 (333)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhCCCCCCccEEEEE--------EcCCEEEEEEeCCCC
Confidence            678887 2    233345544442   223456788999999999999999999975        456688999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      ++|..+.        ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.        ..||..|
T Consensus        86 ~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~a~~~~~~~~~~~gt~~y  164 (333)
T cd05600          86 GDFRTLLNNLGVLSEDHARFYM-AEMFEAVDALHELGYIHRDLKPENFLIDASGHIKLTDFGLSKGIVTYANSVVGSPDY  164 (333)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEEEeCcCCcccccccCCcccCccc
Confidence            9998863        3456666 89999999999988       5555       6999999864        4578899


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        +|||++.+.. ++.++||||+||++|||++|.+||.+.+..+....+..
T Consensus       165 --~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  212 (333)
T cd05600         165 --MAPEVLRGKG-YDFTVDYWSLGCMLYEFLCGFPPFSGSTPNETWENLKY  212 (333)
T ss_pred             --cChhHhcCCC-CCCccceecchHHHhhhhhCCCCCCCCCHHHHHHHHHh
Confidence              9999998765 89999999999999999999999998877766665543

Serine/Threonine Kinases (STKs), ROCK- and NDR-like subfamily, fungal Sid2p- and Dbf2p-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sid2p- and Dbf2p-like group is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This group contains fungal kinases including Schizosaccharomyces pombe Sid2p and Saccharomyces cerevisiae Dbf2p. Group members show similarity to NDR kinases in that they contain an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Sid2p plays a crucial role in the septum initiation network (SIN) and in the initiation of cytokinesis.

>cd07868 STKc_CDK8 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 8

Probab=99.95  E-value=2.9e-27  Score=186.86  Aligned_cols=174  Identities=28%  Similarity=0.485  Sum_probs=127.1

Q ss_pred             cccccc-cC---Cccccccccccc-hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS---KWSPNTPMARCD-VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~---~~~~~~~i~~~~-~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..   +....+++|... ......+.+|++++++++||||+++++++..      ..+...++++||+.+...
T Consensus        14 ~g~Vy~~~~~~~~~~~~~aiK~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~~~lv~e~~~~~l~   87 (317)
T cd07868          14 YGHVYKAKRKDGKDDRDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS------HADRKVWLLFDYAEHDLW   87 (317)
T ss_pred             CeEEEEEEEccCCCCceEEEEEECCCCCcHHHHHHHHHHHhcCCCCCcceeeeEec------CCCcEEEEEEeccCCCHH
Confidence            677777 21   112234444431 2234567899999999999999999997632      334567999999875432


Q ss_pred             HHH----------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc------
Q psy7174          80 ARF----------------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR------  119 (188)
Q Consensus        80 ~~~----------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~------  119 (188)
                      ..+                +..++.++ .|++.||.|||+.+       |+|+           +||+|||++.      
T Consensus        88 ~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~al~~LH~~~ivHrDlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~  166 (317)
T cd07868          88 HIIKFHRASKANKKPVQLPRGMVKSLL-YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL  166 (317)
T ss_pred             HHHHhcccccccCCcccCCHHHHHHHH-HHHHHHHHHHHhCCEEcCCCCHHHEEEecCCCCcCcEEEeecCceeccCCCC
Confidence            221                23456677 89999999999988       4443           6999999753      


Q ss_pred             --------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHhhcCCC
Q psy7174         120 --------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLGTP  182 (188)
Q Consensus       120 --------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~~~~~~p  182 (188)
                              ..+|..|  +|||++.+...++.++|+||+||++|+|++|++||.+...         ...+.++....+.|
T Consensus       167 ~~~~~~~~~~~t~~y--~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (317)
T cd07868         167 KPLADLDPVVVTFWY--RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP  244 (317)
T ss_pred             ccccccCCccccccc--cCCHHHcCCCCcCchhhHHHHHHHHHHHHhCCCCccCCcccccccccccHHHHHHHHHhcCCC
Confidence                    3457789  9999997755589999999999999999999999975432         45677788888877


Q ss_pred             CCCCC
Q psy7174         183 SEDTW  187 (188)
Q Consensus       183 ~~~~~  187 (188)
                      .+..|
T Consensus       245 ~~~~~  249 (317)
T cd07868         245 ADKDW  249 (317)
T ss_pred             ChHHh
Confidence            76655

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK8 can act as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the multi-subunit core Mediator complex, a cofactor that is involved in regulating RNA p

>PHA02988 hypothetical protein; Provisional

Probab=99.95  E-value=5.3e-27  Score=183.09  Aligned_cols=166  Identities=13%  Similarity=0.121  Sum_probs=123.0

Q ss_pred             cccccc---cCCccccccccccch---hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCDV---NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~~---~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      +|.||+   .++..++|.+++...   ...+.+.+|+++|++++||||+++++++...    .......++++||+.+|+
T Consensus        33 ~~~v~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~~~g~~~~~----~~~~~~~~lv~Ey~~~g~  108 (283)
T PHA02988         33 QNSIYKGIFNNKEVIIRTFKKFHKGHKVLIDITENEIKNLRRIDSNNILKIYGFIIDI----VDDLPRLSLILEYCTRGY  108 (283)
T ss_pred             ceEEEEEEECCEEEEEEeccccccccHHHHHHHHHHHHHHHhcCCCCEEEEeeeEEec----ccCCCceEEEEEeCCCCc
Confidence            355555   333444555544322   1246678999999999999999999986321    112346799999999999


Q ss_pred             HHHHH--------HHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc--------cccccccc
Q psy7174          79 KARFY--------SHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR--------HVCTLYCT  127 (188)
Q Consensus        79 l~~~~--------~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~--------~~~~~~y~  127 (188)
                      |..+.        .....++ .|++.||.|||+. +       |+|+       +|++|||++.        ..++..| 
T Consensus       109 L~~~l~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~~~Hrdlkp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y-  186 (283)
T PHA02988        109 LREVLDKEKDLSFKTKLDMA-IDCCKGLYNLYKYTNKPYKNLTSVSFLVTENYKLKIICHGLEKILSSPPFKNVNFMVY-  186 (283)
T ss_pred             HHHHHhhCCCCChhHHHHHH-HHHHHHHHHHHhcCCCCCCcCChhhEEECCCCcEEEcccchHhhhccccccccCcccc-
Confidence            98863        2234455 6999999999985 4       5555       5999999865        3467789 


Q ss_pred             CCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         128 RGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       128 ~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                       +|||++.+. ..++.++|||||||++|||++|+.||.+.+..+....+..
T Consensus       187 -~aPE~~~~~~~~~~~k~Di~SlGvil~el~~g~~Pf~~~~~~~~~~~i~~  236 (283)
T PHA02988        187 -FSYKMLNDIFSEYTIKDDIYSLGVVLWEIFTGKIPFENLTTKEIYDLIIN  236 (283)
T ss_pred             -cCHHHhhhccccccchhhhhHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence             999998652 2489999999999999999999999998887777666644

>cd05584 STKc_p70S6K Catalytic domain of the Protein Serine/Threonine Kinase, 70 kDa ribosomal protein S6 kinase

Probab=99.95  E-value=2.6e-27  Score=187.97  Aligned_cols=162  Identities=18%  Similarity=0.280  Sum_probs=126.0

Q ss_pred             cccccc-c-------CCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-Q-------SKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~-------~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||. .       ++..++|.+++.    .......+.+|+++++.++||||++++++|        ..+...+++||
T Consensus         9 ~g~V~~~~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~il~~l~hp~iv~~~~~~--------~~~~~~~lv~e   80 (323)
T cd05584           9 YGKVFQVRKVTGADTGKIFAMKVLKKATIVRNQKDTAHTKAERNILEAVKHPFIVDLIYAF--------QTGGKLYLILE   80 (323)
T ss_pred             CeEEEEEEEcccCCCCCEEEEEEEEHHHHHhhhhhHHHHHHHHHHHHhCCCCchhceeeEE--------ecCCeEEEEEe
Confidence            678886 1       223335544442    123335677899999999999999999975        44567899999


Q ss_pred             ccccccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          73 IFTKTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        73 ~~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      |+.++++....        ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.           
T Consensus        81 ~~~~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  159 (323)
T cd05584          81 YLSGGELFMHLEREGIFMEDTACFYL-SEISLALEHLHQQGIIYRDLKPENILLDAQGHVKLTDFGLCKESIHEGTVTHT  159 (323)
T ss_pred             CCCCchHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHeEECCCCCEEEeeCcCCeecccCCCcccc
Confidence            99999997752        3455666 79999999999988       5555       6999999753           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ..|+..|  +|||++.+.. ++.++||||+||++|||++|++||.+.+.......+...
T Consensus       160 ~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~pf~~~~~~~~~~~~~~~  215 (323)
T cd05584         160 FCGTIEY--MAPEILMRSG-HGKAVDWWSLGALMYDMLTGAPPFTAENRKKTIDKILKG  215 (323)
T ss_pred             cCCCccc--cChhhccCCC-CCCcceecccHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            3478889  9999998755 889999999999999999999999988877766666543

Serine/Threonine Kinases (STKs), 70 kDa ribosomal protein S6 kinase (p70S6K) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p70S6K subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p70S6K (or S6K) contains only one catalytic kinase domain, unlike p90 ribosomal S6 kinases (RSKs). It acts as a downstream effector of the STK mTOR (mammalian Target of Rapamycin) and plays a role in the regulation of the translation machinery during protein synthesis. p70S6K also plays a pivotal role in regulating cell size and glucose homeostasis. Its targets include S6, the translation initiation factor eIF3, and the in

>cd05593 STKc_PKB_gamma Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B gamma

Probab=99.95  E-value=2.6e-27  Score=188.47  Aligned_cols=159  Identities=15%  Similarity=0.145  Sum_probs=125.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+++.   .......+.+|+++++.++||||+++++++        ..+...+++|||+.+
T Consensus         8 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~Ey~~~   79 (328)
T cd05593           8 FGKVILVREKASGKYYAMKILKKEVIIAKDEVAHTLTESRVLKNTRHPFLTSLKYSF--------QTKDRLCFVMEYVNG   79 (328)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceEEEE--------EcCCEEEEEEeCCCC
Confidence            788886     2333445555442   233456778999999999999999999875        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++...        +..+..++ .|++.||.|||+++       |+||       +||+|||++.           ..||
T Consensus        80 g~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt  158 (328)
T cd05593          80 GELFFHLSRERVFSEDRTRFYG-AEIVSALDYLHSGKIVYRDLKLENLMLDKDGHIKITDFGLCKEGITDAATMKTFCGT  158 (328)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEecccCHHHeEECCCCcEEEecCcCCccCCCcccccccccCC
Confidence            998764        34566667 79999999999998       5555       5999999753           3478


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      ..|  +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+....+
T Consensus       159 ~~y--~aPE~~~~~~-~~~~~DiwslGvil~elltG~~Pf~~~~~~~~~~~~  207 (328)
T cd05593         159 PEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELI  207 (328)
T ss_pred             cCc--cChhhhcCCC-CCccCCccccchHHHHHhhCCCCCCCCCHHHHHHHh
Confidence            899  9999997755 899999999999999999999999887765555444

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, gamma (or Akt3) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-gamma is predominantly expressed in neuronal tissues. Mice deficient in PKB-gamma show a reduction in brain weight due to the decreases in cell size and cell number. PKB-gamma has also been shown to be upregulate

>KOG4257|consensus

Probab=99.95  E-value=1.4e-27  Score=196.07  Aligned_cols=172  Identities=19%  Similarity=0.228  Sum_probs=140.6

Q ss_pred             ccccccc---cC--C-c---cccccccc-cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           4 VCFKPFQ---QS--K-W---SPNTPMAR-CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         4 ~~g~v~~---~~--~-~---~~~~~i~~-~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      .||+||+   ++  + .   +++|..|. |..++.+.|++|.-+|+.++|||||+++|+|         .+...||+||.
T Consensus       401 qFGdVy~gvYt~~~kge~iaVAvKtCK~d~t~d~tekflqEa~iMrnfdHphIikLIGv~---------~e~P~WivmEL  471 (974)
T KOG4257|consen  401 QFGDVYKGVYTDPEKGERIAVAVKTCKTDCTPDDTEKFLQEASIMRNFDHPHIIKLIGVC---------VEQPMWIVMEL  471 (974)
T ss_pred             cccceeeeEecccccCcceeeeeehhccCCChhhHHHHHHHHHHHHhCCCcchhheeeee---------eccceeEEEec
Confidence            4899997   21  1 1   22555555 5778899999999999999999999999996         34578999999


Q ss_pred             cccccHHHHHH---------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccccc-------
Q psy7174          74 FTKTTKARFYS---------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVCT-------  123 (188)
Q Consensus        74 ~~~~~l~~~~~---------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~~-------  123 (188)
                      ++.|.|..+.+         .+..+. .||+.||.|||+.+       ..|+       +|++|||+++....       
T Consensus       472 ~~~GELr~yLq~nk~sL~l~tL~ly~-~Qi~talaYLeSkrfVHRDIAaRNiLVsSp~CVKLaDFGLSR~~ed~~yYkaS  550 (974)
T KOG4257|consen  472 APLGELREYLQQNKDSLPLRTLTLYC-YQICTALAYLESKRFVHRDIAARNILVSSPQCVKLADFGLSRYLEDDAYYKAS  550 (974)
T ss_pred             ccchhHHHHHHhccccchHHHHHHHH-HHHHHHHHHHHhhchhhhhhhhhheeecCcceeeecccchhhhccccchhhcc
Confidence            99999998743         233344 79999999999988       2333       69999999874432       


Q ss_pred             -----ccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 -----LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 -----~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                           ..+  ||||.+.- +.++.++|||-||+-+||++. |..||.|-.+.+.+..|.++-+.|.|+-||
T Consensus       551 ~~kLPIKW--maPESINf-RrFTtASDVWMFgVCmWEIl~lGvkPfqgvkNsDVI~~iEnGeRlP~P~nCP  618 (974)
T KOG4257|consen  551 RGKLPIKW--MAPESINF-RRFTTASDVWMFGVCMWEILSLGVKPFQGVKNSDVIGHIENGERLPCPPNCP  618 (974)
T ss_pred             ccccceee--cCccccch-hcccchhhHHHHHHHHHHHHHhcCCccccccccceEEEecCCCCCCCCCCCC
Confidence                 244  89999865 449999999999999999985 999999999999999999999999999998

>cd05631 STKc_GRK4 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 4

Probab=99.95  E-value=6.3e-27  Score=182.58  Aligned_cols=153  Identities=16%  Similarity=0.221  Sum_probs=118.5

Q ss_pred             cccccc-c----CCccccccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+..   ......+.+|++++++++|+||+++++++        .++...++++||+.+
T Consensus        13 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~iv~~~~~~--------~~~~~~~lv~e~~~~   84 (285)
T cd05631          13 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKRILEKVNSRFVVSLAYAY--------ETKDALCLVLTIMNG   84 (285)
T ss_pred             CEEEEEEEEecCCceEEEEEeeHhhhhhhhhHHHHHHHHHHHHhcCCCcEEEEEEEE--------ccCCeEEEEEEecCC
Confidence            678887 2    2333344443321   22234578899999999999999999875        446678999999999


Q ss_pred             ccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccc
Q psy7174          77 TTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        77 ~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~  122 (188)
                      |++...          +..+..++ .|++.||+|||+.+       |+|+       +||+|||++.          ..|
T Consensus        85 g~L~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~iiH~dikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~g  163 (285)
T cd05631          85 GDLKFHIYNMGNPGFDEQRAIFYA-AELCCGLEDLQRERIVYRDLKPENILLDDRGHIRISDLGLAVQIPEGETVRGRVG  163 (285)
T ss_pred             CcHHHHHHhhCCCCCCHHHHHHHH-HHHHHHHHHHHhCCEEeCCCCHHHEEECCCCCEEEeeCCCcEEcCCCCeecCCCC
Confidence            998653          23455566 79999999999988       5555       6999999854          346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                      +..|  +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..
T Consensus       164 ~~~y--~aPE~~~~~~-~~~~~DvwslGvil~el~~g~~pf~~~~~~  207 (285)
T cd05631         164 TVGY--MAPEVINNEK-YTFSPDWWGLGCLIYEMIQGQSPFRKRKER  207 (285)
T ss_pred             CCCc--cCHhhhcCCC-CCcccCchhHHHHHHHHHhCCCCCCCCCcc
Confidence            7889  9999998765 899999999999999999999999876543

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK4 has a limited tissue distribution. It is mainly found i

>cd05621 STKc_ROCK2 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 2

Probab=99.95  E-value=2.6e-27  Score=191.44  Aligned_cols=162  Identities=16%  Similarity=0.176  Sum_probs=127.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+.+.   .....+.+.+|+.+++.++||||+++++++        .++...+++|||+.+
T Consensus        56 fg~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~--------~~~~~~~lv~Ey~~g  127 (370)
T cd05621          56 FGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFCAF--------QDDKYLYMVMEYMPG  127 (370)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE--------EcCCEEEEEEcCCCC
Confidence            677876     2233445544432   223345678999999999999999999975        456789999999999


Q ss_pred             ccHHHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccc
Q psy7174          77 TTKARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCT  123 (188)
Q Consensus        77 ~~l~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~  123 (188)
                      |+|..+.       ..+..++ .|++.||+|||+.+       |+||       +||+|||++.            ..||
T Consensus       128 g~L~~~l~~~~~~~~~~~~~~-~qil~aL~~LH~~~IvHrDLKp~NILl~~~~~~kL~DFG~a~~~~~~~~~~~~~~~gt  206 (370)
T cd05621         128 GDLVNLMSNYDVPEKWAKFYT-AEVVLALDAIHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVRCDTAVGT  206 (370)
T ss_pred             CcHHHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEEecccceecccCCceecccCCCC
Confidence            9998763       4466677 89999999999988       6666       5999999753            3478


Q ss_pred             ccccCCCCccccccC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ..|  +|||++....   .++.++|+||+||++|+|++|++||.+.+......+|..
T Consensus       207 ~~Y--~aPE~~~~~~~~~~~~~~~DiwSlG~ilyell~G~~Pf~~~~~~~~~~~i~~  261 (370)
T cd05621         207 PDY--ISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYADSLVGTYSKIMD  261 (370)
T ss_pred             ccc--CCHHHHhccCCCCCCCcccCEEeehHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            899  9999986532   377899999999999999999999998888777777764

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found

>cd05627 STKc_NDR2 Catalytic domain of the Protein Serine/Threonine Kinase, Nuclear Dbf2-Related kinase 2

Probab=99.95  E-value=9.5e-28  Score=193.14  Aligned_cols=161  Identities=16%  Similarity=0.204  Sum_probs=128.5

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   ..+..+.+.+|++++..++||||+++++.+        .++...+++|||+++
T Consensus        14 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~iv~~~~~~--------~~~~~~~lv~E~~~g   85 (360)
T cd05627          14 FGEVRLVQKKDTGHIYAMKILRKADMLEKEQVAHIRAERDILVEADGAWVVKMFYSF--------QDKRNLYLIMEFLPG   85 (360)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCEeeEEEEE--------EcCCEEEEEEeCCCC
Confidence            678886 2    233345544432   233456778899999999999999999975        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      |+|..+        +..++.++ .|++.||.|||+.+       |+|+       +||+|||++.               
T Consensus        86 g~L~~~l~~~~~l~~~~~~~~~-~qi~~~L~~lH~~givHrDLkp~NIli~~~~~vkL~DfG~~~~~~~~~~~~~~~~~~  164 (360)
T cd05627          86 GDMMTLLMKKDTLSEEATQFYI-AETVLAIDAIHQLGFIHRDIKPDNLLLDAKGHVKLSDFGLCTGLKKAHRTEFYRNLT  164 (360)
T ss_pred             ccHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEccCCCHHHEEECCCCCEEEeeccCCcccccccccccccccc
Confidence            999875        34566677 89999999999998       5555       6999999742               


Q ss_pred             -------------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         120 -------------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       120 -------------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                                                     .+||..|  +|||++.+.. ++.++|+||+||++|||++|++||.+.+.
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y--~APE~~~~~~-~~~~~DiwSlGvilyel~tG~~Pf~~~~~  241 (360)
T cd05627         165 HNPPSDFSFQNMNSKRKAETWKKNRRQLAYSTVGTPDY--IAPEVFMQTG-YNKLCDWWSLGVIMYEMLIGYPPFCSETP  241 (360)
T ss_pred             cCCcccccccccccccccccccccccccccccCCCccc--cCHHHHcCCC-CCCcceeccccceeeecccCCCCCCCCCH
Confidence                                           2578899  9999998765 89999999999999999999999998888


Q ss_pred             HHHHHHHHh
Q psy7174         169 LDQLTRIFQ  177 (188)
Q Consensus       169 ~~~~~~i~~  177 (188)
                      .....++..
T Consensus       242 ~~~~~~i~~  250 (360)
T cd05627         242 QETYRKVMN  250 (360)
T ss_pred             HHHHHHHHc
Confidence            777766654

Serine/Threonine Kinases (STKs), NDR kinase subfamily, NDR2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NDR subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. NDR kinase contains an N-terminal regulatory (NTR) domain and an insert within the catalytic domain that contains an auto-inhibitory sequence. Like many other AGC kinases, NDR kinase requires phosphorylation at two sites, the activation loop (A-loop) and the hydrophobic motif (HM), for activity. Higher eukaryotes contain two NDR isoforms, NDR1 and NDR2. Both isoforms play a role in proper centrosome duplication. In addition, NDR2 plays a role in regul

>cd07853 STKc_NLK Catalytic domain of the Serine/Threonine Kinase, Nemo-Like Kinase

Probab=99.95  E-value=3.1e-27  Score=190.95  Aligned_cols=174  Identities=28%  Similarity=0.398  Sum_probs=130.3

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+++.+|+++++.++||||+++++++...   ........++++||+.++
T Consensus        13 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~~~~lv~e~~~~~   89 (372)
T cd07853          13 FGVVWSVTDPRDGKRVALKKMPNVFQNLVSCKRVFRELKMLCFFKHDNVLSALDILQPP---HIDPFEEIYVVTELMQSD   89 (372)
T ss_pred             CEEEEEEEECCCCCEEEEEeccccccchHHHHHHHHHHHHHHhCCCCCcCCHhheecCC---CccccceEEEEeeccccC
Confidence            678887 2    222334433332  223446788999999999999999999986221   101112679999999754


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccccc
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTL  124 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~  124 (188)
                      ....+       ...+..++ .|++.||.|||+.+       |+|+       +||+|||++.            ..++.
T Consensus        90 l~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~  168 (372)
T cd07853          90 LHKIIVSPQPLSSDHVKVFL-YQILRGLKYLHSAGILHRDIKPGNLLVNSNCVLKICDFGLARVEEPDESKHMTQEVVTQ  168 (372)
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCChHHEEECCCCCEEeccccceeecccCccccCCCCCcCC
Confidence            33322       34566777 89999999999998       6666       6999999754            23567


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      .|  +|||.+.+...++.++||||+||++|||++|++||.+.+..+.+..|.+.++.|+.
T Consensus       169 ~y--~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~g~~~~  226 (372)
T cd07853         169 YY--RAPEILMGSRHYTSAVDIWSVGCIFAELLGRRILFQAQSPIQQLDLITDLLGTPSL  226 (372)
T ss_pred             Cc--CCHHHHcCCCCCCcHHHHHhHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            89  99999987555899999999999999999999999999998888888887776654

Serine/Threonine Kinases (STKs), Nemo-Like Kinase (NLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The NLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mitogen-activated protein kinases (MAPKs) are important mediators of cellular responses to extracellular signals. NLK is an atypical MAPK that is not regulated by a MAPK kinase. It functions downstream of the MAPK kinase kinase Tak1, which also plays a role in activating the JNK and p38 MAPKs. The Tak1/NLK pathways are regulated by Wnts, a family of secreted proteins that is critical in the control of asymmetric division and cell polarity. NLK can phosphorylate transcription

>cd07875 STKc_JNK1 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 1

Probab=99.95  E-value=4.1e-27  Score=189.62  Aligned_cols=175  Identities=25%  Similarity=0.415  Sum_probs=132.0

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     .++..++|.+++.  .....+.+.+|+.+++.++||||+++++++...  .........+++|||+.++
T Consensus        37 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~ii~~~~~~~~~--~~~~~~~~~~lv~e~~~~~  114 (364)
T cd07875          37 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQ--KSLEEFQDVYIVMELMDAN  114 (364)
T ss_pred             CeEEEEEEECCCCcEEEEEEeCccccCchhHHHHHHHHHHHHhcCCCCccccceeeccc--ccccccCeEEEEEeCCCCC
Confidence            566766     1222334444332  234456788999999999999999999975221  1112334579999999876


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccC
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                      ....+     ...+..++ .|++.||.|||+++       |+|+       +||+|||++.          ..+|..|  
T Consensus       115 l~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~t~~y--  191 (364)
T cd07875         115 LCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY--  191 (364)
T ss_pred             HHHHHHhcCCHHHHHHHH-HHHHHHHHHHhhCCeecCCCCHHHEEECCCCcEEEEeCCCccccCCCCcccCCcccCCc--
Confidence            54433     34456667 89999999999988       5555       6999999864          3567789  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      +|||++.+.. ++.++|||||||++|+|++|+.||.+.+..+...++.+.++.|+++
T Consensus       192 ~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~  247 (364)
T cd07875         192 RAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE  247 (364)
T ss_pred             CCHHHHhCCC-CCchhhHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            9999998765 8999999999999999999999999999988888888888777654

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 1 (JNK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd07876 STKc_JNK2 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 2

Probab=99.95  E-value=1.8e-26  Score=185.56  Aligned_cols=173  Identities=25%  Similarity=0.390  Sum_probs=129.2

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .    ++..++|.+++.  .....+.+.+|+.+++.++||||+++++++....  ........++++||+.++
T Consensus        34 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~~~~~lv~e~~~~~  111 (359)
T cd07876          34 QGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLNVFTPQK--SLEEFQDVYLVMELMDAN  111 (359)
T ss_pred             CEEEEEEEEcCCCceeEEEEecccccchhHHHHHHHHHHHHHhCCCCCEeeeeeeeccCC--CccccceeEEEEeCCCcC
Confidence            677776 2    223335544432  2344567889999999999999999999863211  112224579999999876


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccC
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                      ....+     ...+..++ .|++.||.|||+++       |+|+       +||+|||++.          ..+|..|  
T Consensus       112 l~~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~~ivHrDlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y--  188 (359)
T cd07876         112 LCQVIHMELDHERMSYLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYY--  188 (359)
T ss_pred             HHHHHhccCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEecCCCccccccCccCCCCcccCCC--
Confidence            55443     34566677 89999999999998       5555       6999999864          3467789  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+....+.+.++.|.
T Consensus       189 ~aPE~~~~~~-~~~~~DiwSlG~il~el~tg~~pf~~~~~~~~~~~~~~~~~~~~  242 (359)
T cd07876         189 RAPEVILGMG-YKENVDIWSVGCIMGELVKGSVIFQGTDHIDQWNKVIEQLGTPS  242 (359)
T ss_pred             CCchhccCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCc
Confidence            9999998765 89999999999999999999999999888777777766665544

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 2 (JNK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK1, like JNK2, is expressed in every cell and tissue type. Initially it was thought that JNK1 and JNK2 were functionally redundant as mice deficient in either genes (Jn

>cd05622 STKc_ROCK1 Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase 1

Probab=99.95  E-value=5.7e-27  Score=189.52  Aligned_cols=162  Identities=17%  Similarity=0.177  Sum_probs=125.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   .....+.+.+|+.+++.++||||+++++++        .++...+++|||+++
T Consensus        56 fg~Vy~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~i~~~~~hp~iv~~~~~~--------~~~~~~~lv~Ey~~g  127 (371)
T cd05622          56 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--------QDDRYLYMVMEYMPG  127 (371)
T ss_pred             CeEEEEEEECCCCcEEEEEEEEHHHhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EcCCEEEEEEcCCCC
Confidence            677776 2    222334444331   223345577899999999999999999975        456788999999999


Q ss_pred             ccHHHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccc
Q psy7174          77 TTKARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCT  123 (188)
Q Consensus        77 ~~l~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~  123 (188)
                      |+|..+.       ..+..++ .|++.||.|||+++       |+|+       +||+|||++.            ..||
T Consensus       128 g~L~~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDLkp~NIll~~~~~ikL~DfG~a~~~~~~~~~~~~~~~gt  206 (371)
T cd05622         128 GDLVNLMSNYDVPEKWARFYT-AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT  206 (371)
T ss_pred             CcHHHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHCCEEeCCCCHHHEEECCCCCEEEEeCCceeEcCcCCcccccCcccC
Confidence            9998763       3456666 79999999999998       5565       6999999753            3478


Q ss_pred             ccccCCCCccccccC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.|  +|||++....   .++.++||||+||++|+|++|.+||.+.+......+|..
T Consensus       207 ~~y--~aPE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~  261 (371)
T cd05622         207 PDY--ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMN  261 (371)
T ss_pred             ccc--cCHHHHhccCCCccCCCccceeehhHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            889  9999986532   378899999999999999999999998888777777754

Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK1 (or ROK-beta) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK1 is preferentially expressed in the liver, lung, spleen, testes, an

>cd07873 STKc_PCTAIRE1 Catalytic domain of the Serine/Threonine Kinase, PCTAIRE-1 kinase

Probab=99.94  E-value=1.7e-26  Score=181.26  Aligned_cols=172  Identities=28%  Similarity=0.499  Sum_probs=131.7

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.++.. .......+.+|++++++++||||+++++++        ..+...++++||+.+ +
T Consensus        19 ~g~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~nI~~~~~~~--------~~~~~~~lv~e~~~~-~   89 (301)
T cd07873          19 YATVYKGRSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII--------HTEKSLTLVFEYLDK-D   89 (301)
T ss_pred             CEEEEEEEEcCCCcEEEEEEEecccccCchhHHHHHHHHHHhcCCCCcceEEEEE--------ecCCeEEEEEecccc-C
Confidence            677776 2    223334444332 223345678899999999999999999985        445678999999985 5


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          79 KARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        79 l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      +..+         ...+..++ .|++.||.|||+.+       |+|+       +|++|||++.           ..++.
T Consensus        90 l~~~l~~~~~~~~~~~~~~~~-~qi~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  168 (301)
T cd07873          90 LKQYLDDCGNSINMHNVKLFL-FQLLRGLNYCHRRKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYSNEVVTL  168 (301)
T ss_pred             HHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCCHHHEEECCCCcEEECcCcchhccCCCCCcccccceee
Confidence            5443         23456666 79999999999988       4454       6999999754           23467


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||.+.+...++.++|+||+||++|+|++|++||.+.+..+....+.+..+.|.+..||
T Consensus       169 ~y--~~PE~~~~~~~~~~~~Dv~slG~~l~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  230 (301)
T cd07873         169 WY--RPPDILLGSTDYSTQIDMWGVGCIFYEMSTGRPLFPGSTVEEQLHFIFRILGTPTEETWP  230 (301)
T ss_pred             cc--cCcHHHhCCCCCccHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCChhhch
Confidence            78  999998765558899999999999999999999999988888888888888777776664

Serine/Threonine Kinases (STKs), PCTAIRE-1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PCTAIRE-1 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PCTAIRE-1 is expressed ubiquitously and is localized in the cytoplasm. Its kinase activity is cell cycle dependent and peaks at the S and G2 phases. PCTAIRE-1 is highly expressed in the brain and may pl

>cd05064 PTKc_EphR_A10 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A10

Probab=99.94  E-value=3.4e-26  Score=176.68  Aligned_cols=152  Identities=16%  Similarity=0.190  Sum_probs=121.7

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      ......+.+|+.++++++||||+++++++        ..+...+++|||++++++..+.         ..+..++ .|++
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~~~-~~i~  117 (266)
T cd05064          47 DKQRRGFLAEALTLGQFDHSNIVRLEGVI--------TRGNTMMIVTEYMSNGALDSFLRKHEGQLVAGQLMGML-PGLA  117 (266)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCcCeEEEEE--------ecCCCcEEEEEeCCCCcHHHHHHhCCCCCCHHHHHHHH-HHHH
Confidence            34456788999999999999999999975        3456889999999999998752         3455666 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccccccCCCCccccccCCCCchhHHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      .||+|||+.+       |+|+       +|++|||....            .++..|  +|||.+.+.. ++.++||||+
T Consensus       118 ~al~~lH~~~iiH~dikp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  194 (266)
T cd05064         118 SGMKYLSEMGYVHKGLAAHKVLVNSDLVCKISGFRRLQEDKSEAIYTTMSGKSPVLW--AAPEAIQYHH-FSSASDVWSF  194 (266)
T ss_pred             HHHHHHHHCCEeeccccHhhEEEcCCCcEEECCCcccccccccchhcccCCCCceee--cCHHHHhhCC-ccchhHHHHH
Confidence            9999999988       5565       59999997431            124568  9999987755 8999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ||++||+++ |.+||.+.+..+.+..+.+....|.+..+|
T Consensus       195 G~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  234 (266)
T cd05064         195 GIVMWEVMSYGERPYWDMSGQDVIKAVEDGFRLPAPRNCP  234 (266)
T ss_pred             HHHHHHHhcCCCCCcCcCCHHHHHHHHHCCCCCCCCCCCC
Confidence            999999775 999999888877777777666666665554

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA10 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchor

>cd05592 STKc_nPKC_theta_delta Catalytic domain of the Protein Serine/Threonine Kinases, Novel Protein Kinase C theta and delta

Probab=99.94  E-value=1.1e-26  Score=184.04  Aligned_cols=161  Identities=16%  Similarity=0.226  Sum_probs=124.7

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHh-CCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRR-LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+....|..++.. .+||||+++++++        ..+...+++|||+.
T Consensus         8 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~i~~~~~~~--------~~~~~~~lv~e~~~   79 (316)
T cd05592           8 FGKVMLAELKGTNEFFAIKALKKDVVLEDDDVECTMVERRVLALAWEHPFLTHLFCTF--------QTKEHLFFVMEYLN   79 (316)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhccCCCCccceeeEE--------EcCCEEEEEEcCCC
Confidence            788887     2334556655542   12334556678887775 4799999999875        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 gg~L~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~a~~~~~~~~~~~~~~g  158 (316)
T cd05592          80 GGDLMFHIQSSGRFDEARARFYA-AEIICGLQFLHKKGIIYRDLKLDNVLLDKDGHIKIADFGMCKENMNGEGKASTFCG  158 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCEEeCCCCHHHeEECCCCCEEEccCcCCeECCCCCCccccccC
Confidence            9999765        34456666 79999999999998       5555       6999999754           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DvwslG~il~ell~G~~Pf~~~~~~~~~~~i~~  210 (316)
T cd05592         159 TPDY--IAPEILKGQK-YNESVDWWSFGVLLYEMLIGQSPFHGEDEDELFDSILN  210 (316)
T ss_pred             Cccc--cCHHHHcCCC-CCCcccchhHHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            8899  9999998765 89999999999999999999999998887666665543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta and delta-like isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an imp

>cd05596 STKc_ROCK Catalytic domain of the Protein Serine/Threonine Kinase, Rho-associated coiled-coil containing protein kinase

Probab=99.94  E-value=7.8e-27  Score=188.63  Aligned_cols=162  Identities=17%  Similarity=0.176  Sum_probs=125.2

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+++++.++||||+++++++        .++...+++|||+++
T Consensus        56 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~h~~iv~~~~~~--------~~~~~~~lv~Ey~~g  127 (370)
T cd05596          56 FGEVQLVRHKSSKQVYAMKLLSKFEMIKRSDSAFFWEERDIMAHANSEWIVQLHYAF--------QDDKYLYMVMEYMPG  127 (370)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhhHHHHHHHHHHHHhCCCCCcceEEEEE--------ecCCEEEEEEcCCCC
Confidence            677886 2    223334444332   122334577899999999999999999875        456789999999999


Q ss_pred             ccHHHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccc
Q psy7174          77 TTKARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCT  123 (188)
Q Consensus        77 ~~l~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~  123 (188)
                      |+|..+.       ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.            ..||
T Consensus       128 g~L~~~l~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~kL~DfG~~~~~~~~~~~~~~~~~gt  206 (370)
T cd05596         128 GDLVNLMSNYDIPEKWARFYT-AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMDANGMVRCDTAVGT  206 (370)
T ss_pred             CcHHHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCCHHHEEEcCCCCEEEEeccceeeccCCCcccCCCCCCC
Confidence            9998762       3455666 79999999999998       5555       6999999753            3478


Q ss_pred             ccccCCCCccccccC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.|  +|||++.+..   .++.++|+||+||++|||++|++||.+.+......+|..
T Consensus       207 ~~y--~aPE~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  261 (370)
T cd05596         207 PDY--ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMD  261 (370)
T ss_pred             cCe--ECHHHhccCCCCCCCCCceeeeehhHHHHHHHhCCCCcCCCCHHHHHHHHHc
Confidence            889  9999986532   378899999999999999999999998887777777654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK is also referred to as Rho-associated kinase or simply as Rho kinase. It contains an N-terminal extension, a catalytic kinase domain, and a long C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain. It is activated via in

>KOG4717|consensus

Probab=99.94  E-value=1.4e-26  Score=186.91  Aligned_cols=150  Identities=18%  Similarity=0.289  Sum_probs=124.5

Q ss_pred             ccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------H
Q psy7174          15 SPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------Y   83 (188)
Q Consensus        15 ~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~   83 (188)
                      +++|.|-+-  +.-...++.+|++.|+.++|||||++|++.        -.+..+|+++|+=.+|++.++         +
T Consensus        46 VAVKviDKTKlD~~st~hlfqEVRCMKLVQHpNiVRLYEVi--------DTQTKlyLiLELGD~GDl~DyImKHe~Gl~E  117 (864)
T KOG4717|consen   46 VAVKVIDKTKLDTLSTGHLFQEVRCMKLVQHPNIVRLYEVI--------DTQTKLYLILELGDGGDLFDYIMKHEEGLNE  117 (864)
T ss_pred             eEEEEecccccchhhhhHHHHHHHHHHHhcCcCeeeeeehh--------cccceEEEEEEecCCchHHHHHHhhhccccH
Confidence            344444442  233445788999999999999999999985        235688999999999999987         3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------ccccccccCCCCccccccC
Q psy7174          84 SHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYCTRGAPELLFGAR  138 (188)
Q Consensus        84 ~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~  138 (188)
                      +-.+.++ +||+.|+.|||+-.       |+|+        +|++|||++.          .+|+..|  -|||++++..
T Consensus       118 ~La~kYF-~QI~~AI~YCHqLHVVHRDLKPENVVFFEKlGlVKLTDFGFSNkf~PG~kL~TsCGSLAY--SAPEILLGDs  194 (864)
T KOG4717|consen  118 DLAKKYF-AQIVHAISYCHQLHVVHRDLKPENVVFFEKLGLVKLTDFGFSNKFQPGKKLTTSCGSLAY--SAPEILLGDS  194 (864)
T ss_pred             HHHHHHH-HHHHHHHHHHhhhhhhcccCCcceeEEeeecCceEeeeccccccCCCcchhhcccchhhc--cCchhhhcCc
Confidence            4456677 79999999999976       7877        5999999754          6788999  9999999987


Q ss_pred             CCC-chhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         139 MYG-VGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       139 ~~~-~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                       |+ +++||||||+|+|.+.+|++||+..|+.+.+..|.
T Consensus       195 -YDAPAVDiWSLGVILyMLVCGq~PFqeANDSETLTmIm  232 (864)
T KOG4717|consen  195 -YDAPAVDIWSLGVILYMLVCGQPPFQEANDSETLTMIM  232 (864)
T ss_pred             -cCCcchhhhHHHHHHHHHHhCCCccccccchhhhhhhh
Confidence             65 78999999999999999999999999988888774

>cd05590 STKc_nPKC_eta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C eta

Probab=99.94  E-value=1.1e-26  Score=184.35  Aligned_cols=161  Identities=16%  Similarity=0.170  Sum_probs=125.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++..++|.+++.   .....+.+.+|.++++.+ +||||+++++++        ......+++|||+.
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~--------~~~~~~~iv~Ey~~   79 (320)
T cd05590           8 FGKVMLARLKESGRLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLYCCF--------QTPDRLFFVMEFVN   79 (320)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhccCCCchhceeeEE--------EcCCEEEEEEcCCC
Confidence            788887 2    233345544442   223445677899988876 699999999975        44667899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~g~L~~~i~~~~~l~~~~~~~~~-~ql~~~L~~lH~~~ivH~dlkp~NIli~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (320)
T cd05590          80 GGDLMFHIQKSRRFDEARARFYA-AEITSALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGIFNGKTTSTFCG  158 (320)
T ss_pred             CchHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeeCCCCeecCcCCCccccccc
Confidence            9999764        33455666 79999999999998       5555       6999999743           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~  210 (320)
T cd05590         159 TPDY--IAPEILQEML-YGPSVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILN  210 (320)
T ss_pred             Cccc--cCHHHHcCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHhc
Confidence            8889  9999998755 89999999999999999999999998888777766654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), eta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-eta is predominantly expressed in squamous epithelia, where it plays a crucial role in the signal

>cd07874 STKc_JNK3 Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase 3

Probab=99.94  E-value=1e-26  Score=186.73  Aligned_cols=174  Identities=25%  Similarity=0.402  Sum_probs=129.6

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .    ++..++|.+++.  .....+.+.+|+.+++.++||||+++++++....  ........+++|||+.++
T Consensus        30 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~~~~~lv~e~~~~~  107 (355)
T cd07874          30 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK--SLEEFQDVYLVMELMDAN  107 (355)
T ss_pred             CEEEEEEEecCCCceEEEEEeCCcccChHHHHHHHHHHHHHHHhCCCchhceeeeeeccc--cccccceeEEEhhhhccc
Confidence            667776 1    223334444332  2334567789999999999999999999863211  112234579999999876


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccC
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                      ....+     ...+..++ .|++.||.|||+++       |+|+       +||+|||+++          ..+|..|  
T Consensus       108 l~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~givHrDikp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y--  184 (355)
T cd07874         108 LCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY--  184 (355)
T ss_pred             HHHHHhhcCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCChHHEEECCCCCEEEeeCcccccCCCccccCCccccCCc--
Confidence            55433     34455666 89999999999998       5555       6999999864          3467889  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +|||++.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+...++.|.+
T Consensus       185 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  239 (355)
T cd07874         185 RAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCP  239 (355)
T ss_pred             cCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            9999998765 899999999999999999999999998888877777776666554

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase 3 (JNK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. Vetebrates harbor three different JNK genes (Jnk1, Jnk2, and Jnk3). JNK3 is expressed primarily in the brain, and to a lesser extent in the heart and testis. Mice deficient in Jnk3 are protected against kainic acid-induced seizures, strok

>cd05594 STKc_PKB_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase B alpha

Probab=99.94  E-value=4.1e-27  Score=186.95  Aligned_cols=160  Identities=14%  Similarity=0.134  Sum_probs=125.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+++.   .......+.+|+++++.++||||+++++++        ..+...++||||+.+
T Consensus         8 ~g~V~~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~~~hp~i~~~~~~~--------~~~~~~~lv~E~~~~   79 (325)
T cd05594           8 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF--------QTHDRLCFVMEYANG   79 (325)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCCceEEEE--------EcCCEEEEEEeCCCC
Confidence            788886     2334445555542   223445678899999999999999999875        446688999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhh-cC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKS-SM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++...        +..+..++ .|++.||.|||+ .+       |+||       +||+|||++.           ..|
T Consensus        80 ~~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~lH~~~~ivHrDikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (325)
T cd05594          80 GELFFHLSRERVFSEDRARFYG-AEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG  158 (325)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhcCCEEecCCCCCeEEECCCCCEEEecCCCCeecCCCCcccccccC
Confidence            998764        34556666 799999999997 55       7777       5999999753           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |..|  +|||++.+.. ++.++||||+||++|+|++|+.||.+.+.......+.
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~tG~~Pf~~~~~~~~~~~i~  209 (325)
T cd05594         159 TPEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELIL  209 (325)
T ss_pred             Cccc--CCHHHHccCC-CCCccccccccceeeeeccCCCCCCCCCHHHHHHHHh
Confidence            8899  9999997755 8999999999999999999999998877665555543

Serine/Threonine Kinases (STKs), Protein Kinase B (PKB) or Akt subfamily, alpha (or Akt1) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three PKB isoforms from different genes, PKB-alpha (or Akt1), PKB-beta (or Akt2), and PKB-gamma (or Akt3). PKB contains an N-terminal pleckstrin homology (PH) domain and a C-terminal catalytic domain. PKB-alpha is predominantly expressed in endothelial cells. It is critical for the regulation of angiogenesis and the maintenance of vascular integrity. It also plays a role in adipocyte differentiation. Mice deficien

>cd05589 STKc_PKN Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase N

Probab=99.94  E-value=2.5e-26  Score=182.42  Aligned_cols=161  Identities=16%  Similarity=0.189  Sum_probs=124.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHH---HhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQD---RRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il---~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||.     +++..++|.+++.   ..+..+.+.+|++++   +.++||||+++++++        ..+...+++|||
T Consensus        12 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~l~~e~~~~~~~~~l~hp~i~~~~~~~--------~~~~~~~lv~E~   83 (324)
T cd05589          12 FGKVLLAEYKKTGELYAIKALKKGDIIARDEVESLMCEKRIFETANSERHPFLVNLFACF--------QTEDHVCFVMEY   83 (324)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccccCCCChhceeeEE--------EcCCEEEEEEcC
Confidence            677886     2334445655542   223445677787765   456799999999975        446688999999


Q ss_pred             cccccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cc
Q psy7174          74 FTKTTKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        74 ~~~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~  121 (188)
                      +.++++...       +..+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..
T Consensus        84 ~~~~~L~~~~~~~~l~~~~~~~~~-~qi~~al~~lH~~~ivHrdlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  162 (324)
T cd05589          84 AAGGDLMMHIHTDVFSEPRAVFYA-ACVVLGLQYLHENKIVYRDLKLDNLLLDTEGFVKIADFGLCKEGMGFGDRTSTFC  162 (324)
T ss_pred             CCCCcHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEecCCCHHHeEECCCCcEEeCcccCCccCCCCCCcccccc
Confidence            999998764       34456666 79999999999998       4444       6999999743           34


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |+..|  +|||.+.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       163 g~~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~G~~pf~~~~~~~~~~~i~~  215 (324)
T cd05589         163 GTPEF--LAPEVLTETS-YTRAVDWWGLGVLIYEMLVGESPFPGDDEEEVFDSIVN  215 (324)
T ss_pred             cCccc--cCHhHhcCCC-CCcccchhhHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            78889  9999998755 89999999999999999999999998887776666654

Serine/Threonine Kinases (STKs), Protein Kinase N (PKN) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKN subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKN has a C-terminal catalytic domain that is highly homologous to PKCs. Its unique N-terminal regulatory region contains antiparallel coiled-coil (ACC) domains. In mammals, there are three PKN isoforms from different genes (designated PKN-alpha, beta, and gamma), which show different enzymatic properties, tissue distribution, and varied functions. PKN can be activated by the small GTPase Rho, and by fatty acids such as arachidonic and linoleic acids. It is involved

>KOG0599|consensus

Probab=99.94  E-value=9.6e-27  Score=175.23  Aligned_cols=149  Identities=20%  Similarity=0.244  Sum_probs=123.9

Q ss_pred             hhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      .+...+|+.||+++. ||+|+++.++|        ..+...++|+|.|+.|.|.++        +...+.++ +|+.+|+
T Consensus        66 ~EaT~~Ev~ILRqv~GHP~II~l~D~y--------es~sF~FlVFdl~prGELFDyLts~VtlSEK~tR~iM-rqlfegV  136 (411)
T KOG0599|consen   66 REATRQEISILRQVMGHPYIIDLQDVY--------ESDAFVFLVFDLMPRGELFDYLTSKVTLSEKETRRIM-RQLFEGV  136 (411)
T ss_pred             HHHHHHHHHHHHHhcCCCcEEEeeeec--------cCcchhhhhhhhcccchHHHHhhhheeecHHHHHHHH-HHHHHHH
Confidence            345678999999986 99999999975        566788999999999999886        45678899 9999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCcccccc-----CCCCchhHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGA-----RMYGVGIDMWAV  149 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~-----~~~~~~~Diwsl  149 (188)
                      +|||..+       |+||       +||+|||++.          .+||+.|  +|||.+.++     +.|+..+|+|++
T Consensus       137 eylHa~~IVHRDLKpENILlddn~~i~isDFGFa~~l~~GekLrelCGTPgY--LAPEtikC~m~e~~pGYs~EVD~Wa~  214 (411)
T KOG0599|consen  137 EYLHARNIVHRDLKPENILLDDNMNIKISDFGFACQLEPGEKLRELCGTPGY--LAPETIKCSMYENHPGYSKEVDEWAC  214 (411)
T ss_pred             HHHHHhhhhhcccChhheeeccccceEEeccceeeccCCchhHHHhcCCCcc--cChhheeeecccCCCCccchhhHHHH
Confidence            9999988       7788       4999999854          6899999  999998643     458999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      |+|+|.++.|.+||.-..+.-++..|.++--.....+|
T Consensus       215 GVImyTLLaGcpPFwHRkQmlMLR~ImeGkyqF~speW  252 (411)
T KOG0599|consen  215 GVIMYTLLAGCPPFWHRKQMLMLRMIMEGKYQFRSPEW  252 (411)
T ss_pred             HHHHHHHHcCCCchhHHHHHHHHHHHHhcccccCCcch
Confidence            99999999999999877777777777665333333334

>cd05591 STKc_nPKC_epsilon Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C epsilon

Probab=99.94  E-value=1.2e-26  Score=184.06  Aligned_cols=161  Identities=14%  Similarity=0.147  Sum_probs=125.9

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||. .    ++..++|.+++.   ..+..+.+..|.++++.+ +||||+++++++        .++...+++|||+.
T Consensus         8 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~hp~i~~~~~~~--------~~~~~~~lv~E~~~   79 (321)
T cd05591           8 FGKVMLAELKGTDEVYAIKVLKKDVILQDDDVDCTMTEKRILALAAKHPFLTALHCCF--------QTKDRLFFVMEYVN   79 (321)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhccCCCCccceeeEE--------EcCCeEEEEEeCCC
Confidence            788887 2    223345555542   223445677899999876 799999999976        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++++...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05591          80 GGDLMFQIQRSRKFDEPRSRFYA-AEVTLALMFLHRHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTTTTFCG  158 (321)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeecccceecccCCcccccccc
Confidence            9998764        24455666 79999999999988       5555       6999999754           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +..|  +|||++.+.. ++.++|+||+||++|+|++|++||.+.+..+.+..+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DvwslG~il~el~tg~~Pf~~~~~~~~~~~i~~  210 (321)
T cd05591         159 TPDY--IAPEILQELE-YGPSVDWWALGVLMYEMMAGQPPFEADNEDDLFESILH  210 (321)
T ss_pred             Cccc--cCHHHHcCCC-CCCccceechhHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            8889  9999997755 89999999999999999999999998887777766654

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), epsilon isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-epsilon has been shown to behave as an oncoprotein. Its overexpression contributes to

>cd07867 STKc_CDC2L6 Catalytic domain of Serine/Threonine Kinase, Cell Division Cycle 2-like 6

Probab=99.94  E-value=3.9e-26  Score=180.17  Aligned_cols=174  Identities=29%  Similarity=0.482  Sum_probs=126.1

Q ss_pred             cccccc-cC---Cccccccccccc-hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS---KWSPNTPMARCD-VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~---~~~~~~~i~~~~-~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..   +....+++|... ......+.+|++++++++||||+++++++..      ..+...++++||+.++..
T Consensus        14 ~g~Vy~~~~~~~~~~~~~a~k~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~------~~~~~~~lv~e~~~~~l~   87 (317)
T cd07867          14 YGHVYKAKRKDGKDEKEYALKQIEGTGISMSACREIALLRELKHPNVIALQKVFLS------HSDRKVWLLFDYAEHDLW   87 (317)
T ss_pred             CeeEEEEEecCCCccceEEEEEecCCCCcHHHHHHHHHHHhCCCCCeeeEEEEEec------cCCCeEEEEEeeeCCcHH
Confidence            788887 21   111234444431 2234567899999999999999999998632      345577999999876543


Q ss_pred             HHH----------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc------
Q psy7174          80 ARF----------------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR------  119 (188)
Q Consensus        80 ~~~----------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~------  119 (188)
                      ..+                +..+..++ .|++.||.|||+.+       |+|+           +||+|||++.      
T Consensus        88 ~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~aL~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~kl~DfG~a~~~~~~~  166 (317)
T cd07867          88 HIIKFHRASKANKKPMQLPRSMVKSLL-YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL  166 (317)
T ss_pred             HHHHhhhccccCCCCccCCHHHHHHHH-HHHHHHHHHHHhCCEEcCCCCHHHEEEccCCCCCCcEEEeeccceeccCCCc
Confidence            322                22355666 79999999999988       4444           5899999864      


Q ss_pred             --------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------hHHHHHHHHhhcCCC
Q psy7174         120 --------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES---------DLDQLTRIFQTLGTP  182 (188)
Q Consensus       120 --------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------~~~~~~~i~~~~~~p  182 (188)
                              ..+|..|  +|||++.+...++.++||||+||++|||++|++||....         ....+.++...++.|
T Consensus       167 ~~~~~~~~~~~t~~y--~aPE~~~~~~~~~~~~DiwSlG~il~el~tg~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (317)
T cd07867         167 KPLADLDPVVVTFWY--RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPFHHDQLDRIFSVMGFP  244 (317)
T ss_pred             ccccccCcceecccc--cCcHHhcCCCccCcHHHHHhHHHHHHHHHhCCCCcccccccccccccccHHHHHHHHHhcCCC
Confidence                    2456779  999998765558999999999999999999999997543         234566677777777


Q ss_pred             CCCCC
Q psy7174         183 SEDTW  187 (188)
Q Consensus       183 ~~~~~  187 (188)
                      ....|
T Consensus       245 ~~~~~  249 (317)
T cd07867         245 ADKDW  249 (317)
T ss_pred             Chhhh
Confidence            66655

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 6 (CDC2L6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L6 is also called CDK8-like and was previously referred to as CDK11. However, this is a confusing nomenclature as CDC2L6 is distinct from CDC2L1, which is represented by the two protein products from its gene, called CDK11(p110) and CDK11(p58), as well as

>cd05102 PTKc_VEGFR3 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 3

Probab=99.94  E-value=4.8e-26  Score=181.52  Aligned_cols=132  Identities=20%  Similarity=0.286  Sum_probs=105.6

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ...+.+.+|+++++++ +||||++++++|.       ..+...+++|||+++|+|..+..                    
T Consensus        52 ~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-------~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~  124 (338)
T cd05102          52 SEHKALMSELKILIHIGNHLNVVNLLGACT-------KPNGPLMVIVEFCKYGNLSNFLRAKREFFSPYREKSPKQRGRF  124 (338)
T ss_pred             HHHHHHHHHHHHHHHhccCcceeeEEeEec-------CCCCceEEEEecCCCCcHHHHHHhcchhcccccccchhhhhhh
Confidence            3456788999999999 8999999999752       22346789999999999976532                    


Q ss_pred             --------------------------------------------------HHHHHHHHHHHHHHHHHhhcC-------CC
Q psy7174          85 --------------------------------------------------HLRYLENQQILEGLQALKSSM-------PA  107 (188)
Q Consensus        85 --------------------------------------------------~~~~~~~~qi~~gl~~lH~~~-------~~  107 (188)
                                                                        .+..++ .|+++||.|||+.+       |+
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivHrDiKp~  203 (338)
T cd05102         125 RAMVEQSRVDRRIEAGQASVLFSRFQPSTSGSTNPPQETDDLWKSPLTMEDLICYS-FQVARGMEFLASRKCIHRDLAAR  203 (338)
T ss_pred             hhhhhhhccccccccccCCccccccccccCcccccchhccccccCCCCHHHHHHHH-HHHHHHHHHHHHCCEECCCCccc
Confidence                                                              123345 69999999999988       66


Q ss_pred             Ce-------EEEecCCcccc-------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCC
Q psy7174         108 LL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGE  166 (188)
Q Consensus       108 ~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~  166 (188)
                      |+       +||+|||+++.             .++..|  +|||++.+.. ++.++||||+||++|||++ |..||.+.
T Consensus       204 Nil~~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~sDiwslG~il~el~~~g~~pf~~~  280 (338)
T cd05102         204 NILLSENNVVKICDFGLARDIYKDPDYVRKGSARLPLKW--MAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGV  280 (338)
T ss_pred             eEEEcCCCcEEEeecccccccccCcchhcccCCCCCccc--cCcHHhhcCC-CCcccCHHHHHHHHHHHHhCCCCCCCCC
Confidence            76       59999998642             123568  9999997755 8999999999999999997 99999875


Q ss_pred             Ch
Q psy7174         167 SD  168 (188)
Q Consensus       167 ~~  168 (188)
                      ..
T Consensus       281 ~~  282 (338)
T cd05102         281 QI  282 (338)
T ss_pred             Cc
Confidence            43

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 3 (VEGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR3 (or Flt4) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. V

>cd07863 STKc_CDK4 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 4

Probab=99.94  E-value=4.4e-26  Score=177.54  Aligned_cols=176  Identities=27%  Similarity=0.513  Sum_probs=129.5

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhC---CCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRL---DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l---~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.++..  .........+|+++++.+   +||||+++++++...   ........++++|++
T Consensus        13 ~g~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~ni~~~~~~~~~~---~~~~~~~~~lv~e~~   89 (288)
T cd07863          13 YGTVYKARDPHSGHFVALKSVRVQTNEDGLPLSTVREVALLKRLEAFDHPNIVRLMDVCATS---RTDRETKVTLVFEHV   89 (288)
T ss_pred             CeEEEEEEECCCCcEEEEEEeccCcCCCCCchHHHHHHHHHHHhhhcCCCCeeeeeeeeccc---cCCCCceEEEEEccc
Confidence            677887 2    223334444332  112234567788877765   699999999986321   112345679999999


Q ss_pred             ccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------c
Q psy7174          75 TKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------H  120 (188)
Q Consensus        75 ~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~  120 (188)
                      .+ ++..+          +..+..++ .|++.||.|||+.+       |+|+       +|++|||++.          .
T Consensus        90 ~~-~l~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~  167 (288)
T cd07863          90 DQ-DLRTYLDKVPPPGLPAETIKDLM-RQFLRGLDFLHANCIVHRDLKPENILVTSGGQVKLADFGLARIYSCQMALTPV  167 (288)
T ss_pred             cc-CHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEECCCCCEEECccCccccccCcccCCCc
Confidence            86 44432          34566677 89999999999998       5555       5999999754          2


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .++..|  +|||++.+.. ++.++|+||+||++|+|++|++||.+.+..+.+.++....+.|....||
T Consensus       168 ~~~~~y--~aPE~~~~~~-~~~~~DiwslG~~l~~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  232 (288)
T cd07863         168 VVTLWY--RAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  232 (288)
T ss_pred             cccccc--cCchHhhCCC-CCCcchhhhHHHHHHHHHhCCcCcCCCCHHHHHHHHHHHhCCCChhhCc
Confidence            457789  9999997765 8999999999999999999999999988888888888877777666664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 partners with all three D-type cyclins (D1, D2, and D3) and is also regulated by INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein and plays a role in regulating the early G1 phase of the cell cycle. It is expressed ubiquitou

>cd05603 STKc_SGK2 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 2

Probab=99.94  E-value=1.3e-26  Score=183.70  Aligned_cols=161  Identities=15%  Similarity=0.181  Sum_probs=122.5

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHH-HHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGK-QDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++..++|.+.+.   ......++.+|.. +++.++||||+++++++        .+....+++|||+.
T Consensus         8 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~iv~~~~~~--------~~~~~~~lv~e~~~   79 (321)
T cd05603           8 FGKVLLAKRKSDGSFYAVKVLQKKTILKKKEQNHIMAERNVLLKNLKHPFLVGLHYSF--------QTAEKLYFVLDYVN   79 (321)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHHHHhhHHHHHHHHHHHHHHhCCCCCccceeeEE--------EcCCEEEEEEcCCC
Confidence            788887 2    223334544432   1223345556655 57889999999999875        45668899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++++...        +..+..++ .|+++||.|||+.+       |+||       +||+|||++.           ..|
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (321)
T cd05603          80 GGELFFHLQRERCFLEPRARFYA-AEVASAIGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGVEPEETTSTFCG  158 (321)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEccCCCCccCCCCCCccccccC
Confidence            9998764        34456666 89999999999988       5555       6999999754           346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +..|  +|||.+.+.. ++.++|+||+||++|+|++|.+||.+.+.......+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (321)
T cd05603         159 TPEY--LAPEVLRKEP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDVSQMYDNILH  210 (321)
T ss_pred             Cccc--CCHHHhcCCC-CCCcCcccccchhhhhhhcCCCCCCCCCHHHHHHHHhc
Confidence            7889  9999997755 89999999999999999999999998877666666544

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK2 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK2 shows a more restricted distribution that SGK1 and is most abundantly expressed in epithelial tissues including kidney, liver, pancreas, and the choroid plexus of the brain. In vitro cellular assays show that SGK2 can stimulate the activity of ion channels, the glutamate transporter EEAT4, and the glutamate receptors, GluR6 and GLUR1.

>cd05570 STKc_PKC Catalytic domain of the Protein Serine/Threonine Kinase, Protein Kinase C

Probab=99.94  E-value=3.4e-26  Score=181.23  Aligned_cols=160  Identities=18%  Similarity=0.181  Sum_probs=124.8

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .......+.+|+++++.+ +||||+++++++        .+....+++|||+.
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~il~~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~   79 (318)
T cd05570           8 FGKVLLAELKGTDELYAVKVLKKDVILQDDDVECTMTEKRVLALAGKHPFLTQLHSCF--------QTKDRLFFVMEYVN   79 (318)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhccCCCCccceeeEE--------EcCCEEEEEEcCCC
Confidence            788887     2233345555542   223445677899999888 699999999975        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++|...        +..+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..|
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~-~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (318)
T cd05570          80 GGDLMFHIQRSGRFDEPRARFYA-AEIVLGLQFLHERGIIYRDLKLDNVLLDSEGHIKIADFGMCKEGILGGVTTSTFCG  158 (318)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEccCCCHHHeEECCCCcEEecccCCCeecCcCCCcccceec
Confidence            9998764        34456666 79999999999988       4454       6999999753           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      +..|  +|||++.+.. ++.++|+||+||++|++++|+.||.+.+.......+.
T Consensus       159 ~~~y--~aPE~~~~~~-~~~~~DiwslGvil~~l~~G~~pf~~~~~~~~~~~i~  209 (318)
T cd05570         159 TPDY--IAPEILSYQP-YGPAVDWWALGVLLYEMLAGQSPFEGDDEDELFQSIL  209 (318)
T ss_pred             Cccc--cCHHHhcCCC-CCcchhhhhHHHHHHHHhhCCCCCCCCCHHHHHHHHH
Confidence            8889  9999998765 8999999999999999999999998877666655554

Serine/Threonine Kinases (STKs), Protein Kinase C (PKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, classical PKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. Novel PKCs are calcium-independent, but require DAG and PS for activity, while atypical PKCs only re

>cd05605 STKc_GRK4_like Catalytic domain of G protein-coupled Receptor Kinase 4-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=5.2e-26  Score=177.42  Aligned_cols=156  Identities=16%  Similarity=0.205  Sum_probs=119.2

Q ss_pred             cccccc-c----CCccccccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+..   ......+.+|++++++++||||+++++.+        ..+...+++|||+.+
T Consensus        13 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~   84 (285)
T cd05605          13 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY--------ETKDALCLVLTLMNG   84 (285)
T ss_pred             CeEEEEEEEcCCCceEEEEEEehhhhhhhhhHHHHHHHHHHHHhcCCCCEeeeeeee--------cCCCeEEEEEeccCC
Confidence            677877 2    2334444444321   12234567899999999999999999975        445689999999999


Q ss_pred             ccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccc
Q psy7174          77 TTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        77 ~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~  122 (188)
                      +++...          +..+..++ .|++.||.|||+.+       |+|+       ++++|||++.          ..|
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  163 (285)
T cd05605          85 GDLKFHIYNMGNPGFDEERAVFYA-AEITCGLEDLHRERIVYRDLKPENILLDDYGHIRISDLGLAVEIPEGETIRGRVG  163 (285)
T ss_pred             CcHHHHHHhcCcCCCCHHHHHHHH-HHHHHHHHHHHHCCcEecCCCHHHEEECCCCCEEEeeCCCceecCCCCccccccC
Confidence            999754          23455566 79999999999988       4444       6999999754          246


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL  172 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  172 (188)
                      +..|  +|||++.+.. ++.++|+||+||++|++++|+.||.+.+.....
T Consensus       164 ~~~y--~aPE~~~~~~-~~~~~Diws~G~~l~el~~g~~pf~~~~~~~~~  210 (285)
T cd05605         164 TVGY--MAPEVVKNER-YTFSPDWWGLGCLIYEMIEGKSPFRQRKEKVKR  210 (285)
T ss_pred             CCCc--cCcHHhcCCC-CCccccchhHHHHHHHHHHCCCCCCCCchhhHH
Confidence            7789  9999997755 899999999999999999999999876654433

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5,

>cd05602 STKc_SGK1 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 1

Probab=99.94  E-value=2.1e-26  Score=182.89  Aligned_cols=161  Identities=16%  Similarity=0.206  Sum_probs=123.1

Q ss_pred             cccccc-----cCCccccccccccc---hhhhhHHHHHHH-HHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD---VNVETQAKAEGK-QDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~---~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     .++..++|.+.+..   .....++.+|.. +++.++||||+++++++        ..+...+++|||+.
T Consensus         8 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~h~~Iv~~~~~~--------~~~~~~~lv~e~~~   79 (325)
T cd05602           8 FGKVLLARHKAEEKFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF--------QTADKLYFVLDYIN   79 (325)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCceeEEE--------EcCCeEEEEEeCCC
Confidence            678887     22334455554421   122334555554 56789999999999875        44667899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++++...        +..++.++ .|+++||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~giiHrDlkp~Nili~~~~~~kl~DfG~a~~~~~~~~~~~~~~g  158 (325)
T cd05602          80 GGELFYHLQRERCFLEPRARFYA-AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNGTTSTFCG  158 (325)
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEEccCCCCcccccCCCCcccccC
Confidence            9999775        34566666 89999999999998       5555       6999999753           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.+..+.+..+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  210 (325)
T cd05602         159 TPEY--LAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILN  210 (325)
T ss_pred             Cccc--cCHHHHcCCC-CCCccccccccHHHHHHhcCCCCCCCCCHHHHHHHHHh
Confidence            8899  9999998755 89999999999999999999999998887777666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3. SGK1 is ubiquitously expressed and is under transcriptional control of numerous stimuli including cell stress (cell shrinkage), serum, hormones (gluco- and mineralocorticoids), gonadotropins, growth factors, interleukin-6, and other cytokines. It plays roles in sodium retention and potassium elimination in the kidney, nutrient transport, salt

>cd07878 STKc_p38beta_MAPK11 Catalytic domain of the Serine/Threonine Kinase, p38beta Mitogen-Activated Protein Kinase

Probab=99.94  E-value=3.1e-26  Score=183.01  Aligned_cols=174  Identities=24%  Similarity=0.440  Sum_probs=128.4

Q ss_pred             cccccc-cC-Ccccccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QS-KWSPNTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~-~~~~~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .+ +....+++|+.     .....+.+.+|++++++++||||++++++|....  ........+++++++ ++
T Consensus        28 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~~~~~~~-~~  104 (343)
T cd07878          28 YGSVCSAYDTRLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHMKHENVIGLLDVFTPAT--SIENFNEVYLVTNLM-GA  104 (343)
T ss_pred             CeEEEEEEECCCCCEEEEEEeCchhhhhHHHHHHHHHHHHHHhcCCCchhhhhhhhcccc--cccccCcEEEEeecC-CC
Confidence            677887 22 22223344432     2233456789999999999999999999863211  112234568888887 66


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccC
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~  128 (188)
                      ++..+       ...+..++ .|+++||.|||+++       |+|+       +||+|||++.        ..++..|  
T Consensus       105 ~l~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y--  181 (343)
T cd07878         105 DLNNIVKCQKLSDEHVQFLI-YQLLRGLKYIHSAGIIHRDLKPSNVAVNEDCELRILDFGLARQADDEMTGYVATRWY--  181 (343)
T ss_pred             CHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecccCChhhEEECCCCCEEEcCCccceecCCCcCCccccccc--
Confidence            66654       34566677 89999999999998       6666       6999999854        4578899  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +|||++.+...++.++||||+||++|+|++|+.||.+.+..+.+..+....+.|++
T Consensus       182 ~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~  237 (343)
T cd07878         182 RAPEIMLNWMHYNQTVDIWSVGCIMAELLKGKALFPGNDYIDQLKRIMEVVGTPSP  237 (343)
T ss_pred             cCchHhcCCccCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            99999977545899999999999999999999999988877777777666555443

Serine/Threonine Kinases (STKs), p38beta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38beta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38beta, also called MAPK11, is

>cd05588 STKc_aPKC Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C

Probab=99.94  E-value=3.3e-26  Score=182.18  Aligned_cols=148  Identities=18%  Similarity=0.199  Sum_probs=117.6

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||.     +++..++|.+++.   .....+.+.+|+.+++++ +||||++++++|        .++...+++|||++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~i~~~~~~~~~~~~~~~~e~~il~~~~~hp~Iv~~~~~~--------~~~~~~~lv~e~~~   79 (329)
T cd05588           8 YAKVLLVELKKTRRIYAMKVIKKELVNDDEDIDWVQTEKHVFETASNHPFLVGLHSCF--------QTESRLFFVIEFVS   79 (329)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCCCCceEEEE--------EcCCEEEEEEeCCC
Confidence            688886     2333445555542   223345678899999988 699999999975        44667899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~g~L~~~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  158 (329)
T cd05588          80 GGDLMFHMQRQRKLPEEHARFYS-AEISLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGIRPGDTTSTFCG  158 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEECcCccccccccCCCccccccC
Confidence            9998764        34566666 89999999999998       5555       6999999753           357


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|++++|+.||.
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslG~~l~el~~g~~Pf~  197 (329)
T cd05588         159 TPNY--IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             Cccc--cCHHHHcCCC-CCCccceechHHHHHHHHHCCCCcc
Confidence            8889  9999998755 8999999999999999999999995

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. They contain a C2-like region, instead of a calcium-binding (C2) region found in classical PKCs, in their regulatory domain. There are two aPKC isoforms, zeta and iota. aPKCs are involved in many cellular functions incl

>PHA03212 serine/threonine kinase US3; Provisional

Probab=99.94  E-value=6.1e-26  Score=184.66  Aligned_cols=163  Identities=18%  Similarity=0.209  Sum_probs=120.5

Q ss_pred             cccccc-cC-CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QS-KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~-~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||. .. +....+++|..   ..+.+.+|++++++++||||++++++|        ..+...++++|++.+ ++..+
T Consensus       105 ~g~V~~~~d~~~~~~vaiK~~---~~~~~~~E~~il~~l~HpnIv~~~~~~--------~~~~~~~lv~e~~~~-~L~~~  172 (391)
T PHA03212        105 EGFAFACIDNKTCEHVVIKAG---QRGGTATEAHILRAINHPSIIQLKGTF--------TYNKFTCLILPRYKT-DLYCY  172 (391)
T ss_pred             CeEEEEEEECCCCCEEEEech---hhhhhHHHHHHHHhCCCCCCCCEeEEE--------EECCeeEEEEecCCC-CHHHH
Confidence            566776 22 12223444432   235678999999999999999999976        345678999999864 54433


Q ss_pred             --------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccccccccC
Q psy7174          83 --------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLYCTR  128 (188)
Q Consensus        83 --------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~y~~  128 (188)
                              ...+..++ .|++.||.|||+++       |+||       +||+|||++.            ..||..|  
T Consensus       173 l~~~~~l~~~~~~~i~-~qi~~aL~ylH~~~IvHrDiKP~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~~~gt~~y--  249 (391)
T PHA03212        173 LAAKRNIAICDILAIE-RSVLRAIQYLHENRIIHRDIKAENIFINHPGDVCLGDFGAACFPVDINANKYYGWAGTIAT--  249 (391)
T ss_pred             HHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCChHhEEEcCCCCEEEEeCCcccccccccccccccccCccCC--
Confidence                    23456677 89999999999988       6776       5999999863            3578899  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC-------ChHHHHHHHHhhcCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE-------SDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-------~~~~~~~~i~~~~~~p~  183 (188)
                      +|||++.+.. ++.++||||+||++|||++|+.||.+.       ....++..+.+..+.++
T Consensus       250 ~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~p~~~~~~~~~~~~~~~~l~~i~~~~g~~p  310 (391)
T PHA03212        250 NAPELLARDP-YGPAVDIWSAGIVLFEMATCHDSLFEKDGLDGDCDSDRQIKLIIRRSGTHP  310 (391)
T ss_pred             CChhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCcCCcccccccCchhHHHHHHHHHhcCCh
Confidence            9999998765 999999999999999999999876543       23345666666655543

>cd05619 STKc_nPKC_theta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C theta

Probab=99.94  E-value=7.5e-26  Score=179.21  Aligned_cols=160  Identities=16%  Similarity=0.227  Sum_probs=123.5

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHh-CCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRR-LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++..++|.+++.   .....+....|..+++. ++||||+++++++        .++...+++|||++
T Consensus         8 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~hp~iv~~~~~~--------~~~~~~~lv~ey~~   79 (316)
T cd05619           8 FGKVFLAELKGTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHLYCTF--------QTKENLFFVMEYLN   79 (316)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCcCcceEEEE--------EeCCEEEEEEeCCC
Confidence            788887 2    233445555442   12334556778888876 5899999999975        44567899999999


Q ss_pred             cccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|....        ..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~-~qi~~al~~LH~~~ivHrdikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05619          80 GGDLMFHIQSCHKFDLPRATFYA-AEIICGLQFLHSKGIVYRDLKLDNILLDTDGHIKIADFGMCKENMLGDAKTCTFCG  158 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEeCCCCHHHEEECCCCCEEEccCCcceECCCCCCceeeecC
Confidence            99997652        3455566 79999999999998       4454       6999999754           346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+.
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~i~  209 (316)
T cd05619         159 TPDY--IAPEILLGQK-YNTSVDWWSFGVLLYEMLIGQSPFHGHDEEELFQSIR  209 (316)
T ss_pred             Cccc--cCHHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            8889  9999998755 8999999999999999999999998887766665553

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), theta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-theta is selectively expressed in T-cells and plays an important and non-redundant role in

>cd05608 STKc_GRK1 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 1

Probab=99.94  E-value=6.6e-26  Score=176.43  Aligned_cols=152  Identities=17%  Similarity=0.170  Sum_probs=117.1

Q ss_pred             ccccccc-cC----Ccccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           4 VCFKPFQ-QS----KWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         4 ~~g~v~~-~~----~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      -||.||. ..    +..++|.+.+.   .....+.+..|++++++++||||+++.+++        ..+...+++|||++
T Consensus         5 ~~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~   76 (280)
T cd05608           5 GFGEVSACQMRATGKLYACKKLNKKRLKKRKGYEGAMVEKRILAKVHSRFIVSLAYAF--------QTKTDLCLVMTIMN   76 (280)
T ss_pred             CceeEEEEEEccCCcEEEEEeeeHHHHhhhHHHHHHHHHHHHHHhCCCCcEeeeeEEE--------cCCCeEEEEEeCCC
Confidence            3788887 22    23334444332   112335677899999999999999999875        34567899999999


Q ss_pred             cccHHHH------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          76 KTTKARF------------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        76 ~~~l~~~------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      +|+|...            +..+..++ .|++.||.|||+.+       |+|+       +|++|||++.          
T Consensus        77 ~g~L~~~~~~~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~  155 (280)
T cd05608          77 GGDLRYHIYNVDEENPGFPEPRACFYT-AQIISGLEHLHQRRIIYRDLKPENVLLDNDGNVRISDLGLAVELKDGQSKTK  155 (280)
T ss_pred             CCCHHHHHHhccccCCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCccceecCCCCcccc
Confidence            9998753            23455566 79999999999988       4454       6999999864          


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                       ..|+..|  +|||.+.+.. ++.++|+||+||++|++++|+.||....
T Consensus       156 ~~~g~~~y--~aPE~~~~~~-~~~~~DvwslG~il~el~~g~~pf~~~~  201 (280)
T cd05608         156 GYAGTPGF--MAPELLQGEE-YDFSVDYFALGVTLYEMIAARGPFRARG  201 (280)
T ss_pred             ccCCCcCc--cCHHHhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCC
Confidence             2467789  9999998765 8999999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK1 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK1, also called rhodopsin kinase, belongs to the visual g

>cd06649 PKc_MEK2 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 2

Probab=99.94  E-value=9e-26  Score=179.76  Aligned_cols=134  Identities=20%  Similarity=0.273  Sum_probs=111.5

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+++.+|++++++++||||+++++++        ..+...+++|||+.+++|..+.        ..+..++ .|++.|
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~~i~~~  115 (331)
T cd06649          45 AIRNQIIRELQVLHECNSPYIVGFYGAF--------YSDGEISICMEHMDGGSLDQVLKEAKRIPEEILGKVS-IAVLRG  115 (331)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCCeEEEEE--------EECCEEEEEeecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHH
Confidence            3456789999999999999999999976        3456789999999999998763        3355666 799999


Q ss_pred             HHHHhhcC--------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSSM--------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~~--------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      |.|||+.+        |+|+       +||+|||++.         ..|+..|  +|||++.+.. ++.++|+||+||++
T Consensus       116 l~~lH~~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~g~~~y--~aPE~~~~~~-~~~~~DiwslG~il  192 (331)
T cd06649         116 LAYLREKHQIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY--MSPERLQGTH-YSVQSDIWSMGLSL  192 (331)
T ss_pred             HHHHhhcCCEEcCCCChhhEEEcCCCcEEEccCcccccccccccccCCCCcCc--CCHhHhcCCC-CCchHhHHHHHHHH
Confidence            99999853        5665       5999999754         3578889  9999998765 89999999999999


Q ss_pred             HHHHhCCCCCCCCChHHH
Q psy7174         154 CELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~  171 (188)
                      |++++|+.||...+..+.
T Consensus       193 ~el~tg~~p~~~~~~~~~  210 (331)
T cd06649         193 VELAIGRYPIPPPDAKEL  210 (331)
T ss_pred             HHHHhCCCCCCCCCHHHH
Confidence            999999999987665443

Protein kinases (PKs), MAP/ERK Kinase (MEK) 2 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK2 is a dual-specificity PK that phosphorylates and activates the downst

>KOG0614|consensus

Probab=99.94  E-value=1.9e-27  Score=191.31  Aligned_cols=153  Identities=18%  Similarity=0.251  Sum_probs=134.4

Q ss_pred             ccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------
Q psy7174          15 SPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------   83 (188)
Q Consensus        15 ~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------   83 (188)
                      .++|+++|.   ..+..++...|.+||..++.|.||++|--        +-++...|++||-|.||.+-.+.        
T Consensus       448 fAlKilkK~hIVdtkQqeHv~sEr~Im~~~~s~fIvrLYrT--------frd~kyvYmLmEaClGGElWTiLrdRg~Fdd  519 (732)
T KOG0614|consen  448 FALKILKKKHIVDTKQQEHVFSERNIMMECRSDFIVRLYRT--------FRDSKYVYMLMEACLGGELWTILRDRGSFDD  519 (732)
T ss_pred             HHHHHHhHhhccchhHHHHHHhHHHHHHhcCchHHHHHHHH--------hccchhhhhhHHhhcCchhhhhhhhcCCccc
Confidence            457888873   66778889999999999999999999984        47788999999999999987752        


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCC
Q psy7174          84 SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        84 ~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~  139 (188)
                      ...+++. ..+++|++|||+++       |+|+       +|+.|||+++          ++||+.|  .|||++++.. 
T Consensus       520 ~tarF~~-acv~EAfeYLH~k~iIYRDLKPENllLd~~Gy~KLVDFGFAKki~~g~KTwTFcGTpEY--VAPEIILnKG-  595 (732)
T KOG0614|consen  520 YTARFYV-ACVLEAFEYLHRKGIIYRDLKPENLLLDNRGYLKLVDFGFAKKIGSGRKTWTFCGTPEY--VAPEIILNKG-  595 (732)
T ss_pred             chhhhhH-HHHHHHHHHHHhcCceeccCChhheeeccCCceEEeehhhHHHhccCCceeeecCCccc--ccchhhhccC-
Confidence            3456666 79999999999999       7777       5999999854          7899999  9999999966 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      ++.++|.||||+++||+++|.|||.+.+++.+...|++++
T Consensus       596 HD~avDyWaLGIli~ELL~G~pPFs~~dpmktYn~ILkGi  635 (732)
T KOG0614|consen  596 HDRAVDYWALGILIYELLTGSPPFSGVDPMKTYNLILKGI  635 (732)
T ss_pred             cchhhHHHHHHHHHHHHHcCCCCCCCCchHHHHHHHHhhh
Confidence            9999999999999999999999999999999999998764

>cd05616 STKc_cPKC_beta Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C beta

Probab=99.94  E-value=5e-26  Score=180.58  Aligned_cols=161  Identities=18%  Similarity=0.157  Sum_probs=124.8

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+....|.+++..+. |++|+++++++        .+....+++|||+.
T Consensus        13 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~--------~~~~~~~lv~E~~~   84 (323)
T cd05616          13 FGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKPPFLTQLHSCF--------QTMDRLYFVMEYVN   84 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCeEeeEEEEE--------ecCCEEEEEEcCCC
Confidence            788887     2233445555542   1223345677888888774 89999999875        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|...        +..+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..|
T Consensus        85 ~g~L~~~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  163 (323)
T cd05616          85 GGDLMYQIQQVGRFKEPHAVFYA-AEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENMWDGVTTKTFCG  163 (323)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCEEecCCCHHHeEECCCCcEEEccCCCceecCCCCCccccCCC
Confidence            9999764        24456666 79999999999988       5555       6999999754           346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|+.||.+.+.......+..
T Consensus       164 t~~y--~aPE~~~~~~-~~~~~DiwSlGvil~elltg~~Pf~~~~~~~~~~~i~~  215 (323)
T cd05616         164 TPDY--IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIME  215 (323)
T ss_pred             Chhh--cCHHHhcCCC-CCCccchhchhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            8889  9999998765 89999999999999999999999998887777766654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and

>PF07714 Pkinase_Tyr: Protein tyrosine kinase Protein kinase; unclassified specificity

Probab=99.94  E-value=5.5e-26  Score=175.09  Aligned_cols=152  Identities=20%  Similarity=0.281  Sum_probs=117.7

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQI   94 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi   94 (188)
                      .+..+.+.+|++++++++||||++++|++.        .....++++||+++|+|..+.          ..+..++ .|+
T Consensus        42 ~~~~~~~~~e~~~l~~l~h~ni~~~~g~~~--------~~~~~~lv~e~~~~g~L~~~L~~~~~~~~~~~~~~~i~-~~i  112 (259)
T PF07714_consen   42 EEEEEEFLNEIQILRKLRHPNIVKLYGFCI--------ENEPLFLVMEYCPGGSLDDYLKSKNKEPLSEQQRLSIA-IQI  112 (259)
T ss_dssp             HHHHHHHHHHHHHHHTHSBTTBE-EEEEEE--------SSSSEEEEEE--TTEBHHHHHHHTCTTTSBHHHHHHHH-HHH
T ss_pred             cccceeeeeccccccccccccccccccccc--------cccccccccccccccccccccccccccccccccccccc-ccc
Confidence            345688999999999999999999999873        345689999999999998752          2344455 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      +.||.|||+.+       +.|+       +||+|||+....             ....|  +|||.+.... ++.++|||
T Consensus       113 ~~~l~~Lh~~~iiH~~l~~~nill~~~~~~Kl~~f~~~~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~-~~~ksDVy  189 (259)
T PF07714_consen  113 AEALSYLHSNNIIHGNLSPSNILLDSNGQVKLSDFGLSRPISEKSKYKNDSSQQLPLRY--LAPEVLKDGE-YTKKSDVY  189 (259)
T ss_dssp             HHHHHHHHHTTEEEST-SGGGEEEETTTEEEEESTTTGEETTTSSSEEESTTSESGGGG--S-HHHHHHSE-ESHHHHHH
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc--cccccccccc-cccccccc
Confidence            99999999988       3333       699999986533             34567  8999998765 89999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         148 AVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       148 slG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |||+++||+++ |+.||.+.+..+....+.+....+.+..+|
T Consensus       190 sfG~~l~ei~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  231 (259)
T PF07714_consen  190 SFGMLLYEILTLGKFPFSDYDNEEIIEKLKQGQRLPIPDNCP  231 (259)
T ss_dssp             HHHHHHHHHHTTSSGTTTTSCHHHHHHHHHTTEETTSBTTSB
T ss_pred             ccccccccccccccccccccccccccccccccccceeccchh
Confidence            99999999999 789999888888777776666555555443

Tyrosine kinase, catalytic domain; InterPro: IPR001245 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Tyrosine-protein kinases can transfer a phosphate group from ATP to a tyrosine residue in a protein. These enzymes can be divided into two main groups []: Receptor tyrosine kinases (RTK), which are transmembrane proteins involved in signal transduction; they play key roles in growth, differentiation, metabolism, adhesion, motility, death and oncogenesis []. RTKs are composed of 3 domains: an extracellular domain (binds ligand), a transmembrane (TM) domain, and an intracellular catalytic domain (phosphorylates substrate). The TM domain plays an important role in the dimerisation process necessary for signal transduction []. Cytoplasmic / non-receptor tyrosine kinases, which act as regulatory proteins, playing key roles in cell differentiation, motility, proliferation, and survival. For example, the Src-family of protein-tyrosine kinases []. ; GO: 0004672 protein kinase activity, 0006468 protein phosphorylation; PDB: 2HYY_C 1OPL_A 2V7A_A 2G2H_B 2G1T_A 3PYY_A 3CS9_D 2HZI_A 2E2B_A 2HIW_A ....

>cd05582 STKc_RSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, 90 kDa ribosomal protein S6 kinase

Probab=99.94  E-value=7.1e-27  Score=185.01  Aligned_cols=161  Identities=16%  Similarity=0.210  Sum_probs=124.9

Q ss_pred             cccccc--------cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ--------QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~--------~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||.        .++..++|.+++.  .......+.+|++++++++||||+++++++        .++...++++||+
T Consensus         9 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~   80 (318)
T cd05582           9 FGKVFLVRKITGPDAGQLYAMKVLKKATLKVRDRVRTKMERDILAEVNHPFIVKLHYAF--------QTEGKLYLILDFL   80 (318)
T ss_pred             CEEEEEEEEeccCCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhCCCCCcccEEEEE--------EcCCEEEEEEcCC
Confidence            677775        1123334444442  223345677899999999999999999975        4466889999999


Q ss_pred             ccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cc
Q psy7174          75 TKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        75 ~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~  121 (188)
                      .++++...        +..+..++ .|+++||.|||+.+       |+|+       +||+|||++.           ..
T Consensus        81 ~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  159 (318)
T cd05582          81 RGGDLFTRLSKEVMFTEEDVKFYL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC  159 (318)
T ss_pred             CCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCEecCCCCHHHeEECCCCcEEEeeccCCcccCCCCCceeccc
Confidence            99998764        34566677 89999999999998       4444       6999999754           34


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |+..|  +|||.+.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+.+
T Consensus       160 g~~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~tg~~p~~~~~~~~~~~~i~~  212 (318)
T cd05582         160 GTVEY--MAPEVVNRRG-HTQSADWWSFGVLMFEMLTGSLPFQGKDRKETMTMILK  212 (318)
T ss_pred             CChhh--cCHHHHcCCC-CCCccceeccceEeeeeccCCCCCCCCCHHHHHHHHHc
Confidence            67789  9999997755 89999999999999999999999988877666666644

Serine/Threonine Kinases (STKs), 90 kDa ribosomal protein S6 kinase (RSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. RSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family. They are activated by signaling inputs from extracellular regulated kinase (ERK) and phosphoinositide dependent kinase 1 (PDK1). ERK phosphorylates and activates the CTD of RSK, serving as a docking site for PDK1, which phosphorylates and activates the NTD, which in turn phosphorylate

>cd05587 STKc_cPKC Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C

Probab=99.94  E-value=7.9e-26  Score=179.53  Aligned_cols=161  Identities=19%  Similarity=0.179  Sum_probs=124.5

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCC-CeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYA-NIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~-niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|+++++.++|+ +|+++++++        .+....+++|||+.
T Consensus        13 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~--------~~~~~~~lv~E~~~   84 (324)
T cd05587          13 FGKVMLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF--------QTMDRLYFVMEYVN   84 (324)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhcCCCCceeeeEEEE--------EcCCEEEEEEcCCC
Confidence            688887     2223445555442   223456678899999999864 588888865        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        85 ~g~L~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~g  163 (324)
T cd05587          85 GGDLMYHIQQVGKFKEPHAVFYA-AEIAIGLFFLHSKGIIYRDLKLDNVMLDAEGHIKIADFGMCKENIFGGKTTRTFCG  163 (324)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHeEEcCCCCEEEeecCcceecCCCCCceeeecC
Confidence            9999764        23455566 79999999999998       5555       6999999754           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|++||.+.+..+....+..
T Consensus       164 t~~y--~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~  215 (324)
T cd05587         164 TPDY--IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQSIME  215 (324)
T ss_pred             Cccc--cChhhhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHc
Confidence            8899  9999998765 89999999999999999999999998887766666643

Serine/Threonine Kinases (STKs), Classical (or Conventional) Protein Kinase C (cPKC) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. cPKCs contain a calcium-binding C2 region in their regulatory

>cd05084 PTKc_Fes Catalytic domain of the Protein Tyrosine Kinase, Fes

Probab=99.94  E-value=2.7e-25  Score=169.95  Aligned_cols=161  Identities=18%  Similarity=0.211  Sum_probs=121.0

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+.+. ..+....+.+|++++++++||||+++++++        ..+...++++||+.+++
T Consensus         8 ~g~vy~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   79 (252)
T cd05084           8 FGEVFSGRLRADNTPVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC--------TQKQPIYIVMELVQGGD   79 (252)
T ss_pred             CccEEEEEEecCCceEEEEecCccCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE--------cCCCCeEEEEeeccCCc
Confidence            688887 2    222334433332 234456789999999999999999999986        34567899999999999


Q ss_pred             HHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccccc-------------
Q psy7174          79 KARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVC-------------  122 (188)
Q Consensus        79 l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~-------------  122 (188)
                      +..+.         ..+..++ .|+++||.|||+.+       |+|+       +|++|||++....             
T Consensus        80 L~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  158 (252)
T cd05084          80 FLTFLRTEGPRLKVKELIQMV-ENAAAGMEYLESKHCIHRDLAARNCLVTEKNVLKISDFGMSREEEDGVYASTGGMKQI  158 (252)
T ss_pred             HHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhCCccccccchheEEEcCCCcEEECccccCcccccccccccCCCCCC
Confidence            88752         3345566 79999999999988       6665       5999999865211             


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      +..|  +|||.+.+.. ++.++|+||+||++|++++ |.+||...........+..
T Consensus       159 ~~~y--~aPE~~~~~~-~~~~~Dv~slG~il~e~~~~~~~p~~~~~~~~~~~~~~~  211 (252)
T cd05084         159 PVKW--TAPEALNYGR-YSSESDVWSFGILLWEAFSLGAVPYANLSNQQTREAIEQ  211 (252)
T ss_pred             ceee--cCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCccccCHHHHHHHHHc
Confidence            2348  9999987755 8999999999999999997 8999976665544444443

Protein Tyrosine Kinase (PTK) family; Fes (or Fps) kinase subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr kinase activity. Fes kinase is expressed in myeloid, vascular

>cd05604 STKc_SGK3 Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase 3

Probab=99.94  E-value=2e-26  Score=183.02  Aligned_cols=161  Identities=16%  Similarity=0.185  Sum_probs=123.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHH-HHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGK-QDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||. .    ++..++|.+.+.   ......++.+|.. +++.++||||+++++++        ..+...+++|||+.
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~l~~~~hp~iv~~~~~~--------~~~~~~~lv~e~~~   79 (325)
T cd05604           8 FGKVLLAKRKLDGKCYAVKVLQKKIVLNRKEQKHIMAERNVLLKNVKHPFLVGLHYSF--------QTTEKLYFVLDFVN   79 (325)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHHhCCCCCCccEEEEE--------ecCCEEEEEEcCCC
Confidence            788886 2    233345544432   2233345566665 46779999999999875        44678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++++...        +..+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..|
T Consensus        80 ~~~L~~~l~~~~~~~~~~~~~~~-~qi~~al~~lH~~givH~Dlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (325)
T cd05604          80 GGELFFHLQRERSFPEPRARFYA-AEIASALGYLHSINIVYRDLKPENILLDSQGHVVLTDFGLCKEGIAQSDTTTTFCG  158 (325)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCCHHHeEECCCCCEEEeecCCcccCCCCCCCcccccC
Confidence            9998764        34566677 89999999999988       5555       6999999754           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +..|  +|||++.+.. ++.++|+||+||++|+|++|.+||.+.+..+....+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DvwslG~il~el~~G~~pf~~~~~~~~~~~~~~  210 (325)
T cd05604         159 TPEY--LAPEVIRKQP-YDNTVDWWCLGAVLYEMLYGLPPFYCRDVAEMYDNILH  210 (325)
T ss_pred             Chhh--CCHHHHcCCC-CCCcCccccccceehhhhcCCCCCCCCCHHHHHHHHHc
Confidence            8889  9999998765 89999999999999999999999998887777666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, SGK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGK3 is expressed in most tissues and is most abundant in the embryo and adult heart and spleen. It was originally discovered in a screen for antiapoptotic genes. It phosphorylates and inhibits the proapoptotic proteins, Bad and FKHRL1. SGK3 also regulates many transporters, ion channels,

>PTZ00283 serine/threonine protein kinase; Provisional

Probab=99.94  E-value=1.2e-25  Score=187.96  Aligned_cols=174  Identities=16%  Similarity=0.097  Sum_probs=127.3

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||.     +++..++|.+...  .......+.+|+.++..++|+||+++++.+..............++++||+.+|
T Consensus        45 fG~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~Ei~~l~~~~h~~iv~~~~~~~~~~~~~~~~~~~i~lV~Ey~~~g  124 (496)
T PTZ00283         45 TGTVLCAKRVSDGEPFAVKVVDMEGMSEADKNRAQAEVCCLLNCDFFSIVKCHEDFAKKDPRNPENVLMIALVLDYANAG  124 (496)
T ss_pred             CEEEEEEEEcCCCCEEEEEEEecccCCHHHHHHHHHHHHHHhcCCCCcEEEeecceecccccCcccceEEEEEEeCCCCC
Confidence            677876     2233334443331  334556788999999999999999998865332111111122468999999999


Q ss_pred             cHHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------
Q psy7174          78 TKARFY------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        78 ~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------  119 (188)
                      +|....            ..+..++ .|++.||.|||+.+       |+||       +||+|||+++            
T Consensus       125 sL~~~l~~~~~~~~~l~e~~~~~i~-~qll~aL~~lH~~~IiHrDLKP~NILl~~~~~vkL~DFGls~~~~~~~~~~~~~  203 (496)
T PTZ00283        125 DLRQEIKSRAKTNRTFREHEAGLLF-IQVLLAVHHVHSKHMIHRDIKSANILLCSNGLVKLGDFGFSKMYAATVSDDVGR  203 (496)
T ss_pred             cHHHHHHHhhccCCCCCHHHHHHHH-HHHHHHHHHHHhCCEecCCCCHHHEEEeCCCCEEEEecccCeeccccccccccc
Confidence            997642            2345566 79999999999988       5555       6999999853            


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                       ..||+.|  +|||++.+.. ++.++||||+||++|||++|+.||.+.+..+.+..+......|
T Consensus       204 ~~~Gt~~Y--~aPE~~~~~~-~s~k~DVwSlGvilyeLltG~~Pf~~~~~~~~~~~~~~~~~~~  264 (496)
T PTZ00283        204 TFCGTPYY--VAPEIWRRKP-YSKKADMFSLGVLLYELLTLKRPFDGENMEEVMHKTLAGRYDP  264 (496)
T ss_pred             cccCCcce--eCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhcCCCCC
Confidence             3478889  9999998765 9999999999999999999999999887766666665443333

>cd05620 STKc_nPKC_delta Catalytic domain of the Protein Serine/Threonine Kinase, Novel Protein Kinase C delta

Probab=99.94  E-value=6.1e-26  Score=179.68  Aligned_cols=160  Identities=16%  Similarity=0.197  Sum_probs=123.3

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||. .    ++..++|.+++.   .....+...+|.+++... +||||+++++++        .++...+++|||+.
T Consensus         8 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~--------~~~~~~~lv~E~~~   79 (316)
T cd05620           8 FGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALAWENPFLTHLYCTF--------QTKEHLFFVMEFLN   79 (316)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhcchHHHHHHHHHHHHhccCCCCccCeeEEE--------EeCCEEEEEECCCC
Confidence            788887 2    233345555442   123445677888888764 899999999975        45678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++|...        +..+..++ .|++.||+|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~g~L~~~i~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivHrDlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (316)
T cd05620          80 GGDLMFHIQDKGRFDLYRATFYA-AEIVCGLQFLHSKGIIYRDLKLDNVMLDRDGHIKIADFGMCKENVFGDNRASTFCG  158 (316)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHeEECCCCCEEeCccCCCeecccCCCceeccCC
Confidence            9998764        23455566 79999999999998       5555       6999999753           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|+.||.+.+..+....+.
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslGvil~el~~g~~Pf~~~~~~~~~~~~~  209 (316)
T cd05620         159 TPDY--IAPEILQGLK-YTFSVDWWSFGVLLYEMLIGQSPFHGDDEDELFESIR  209 (316)
T ss_pred             CcCc--cCHHHHcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            8899  9999998765 8999999999999999999999998887766655543

Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. I

>cd05048 PTKc_Ror Catalytic Domain of the Protein Tyrosine Kinases, Receptor tyrosine kinase-like Orphan Receptors

Probab=99.94  E-value=2.7e-25  Score=172.73  Aligned_cols=148  Identities=17%  Similarity=0.254  Sum_probs=116.7

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ....+.+.+|++++++++||||+++++++        .++...++++||+.++++..+..                    
T Consensus        49 ~~~~~~~~~ei~~l~~l~h~~i~~~~~~~--------~~~~~~~~~~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  120 (283)
T cd05048          49 PKVQQEFRQEAELMSDLQHPNIVCLLGVC--------TKEQPTCMLFEYLAHGDLHEFLVRNSPHSDVGAESGDETVKSS  120 (283)
T ss_pred             HHHHHHHHHHHHHHHhcCCcccceEEEEE--------cCCCceEEEEecCCCCcHHHHHHhcCCCcccccccccccccCC
Confidence            34456788999999999999999999975        44567899999999999887532                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCcc
Q psy7174          85 ----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPEL  133 (188)
Q Consensus        85 ----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~  133 (188)
                          .+..++ .|+++||.|||+.+       |+|+       +||+|||++..             .++..|  +|||.
T Consensus       121 l~~~~~~~~~-~~l~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~  197 (283)
T cd05048         121 LDCSDFLHIA-IQIAAGMEYLSSHHFVHRDLAARNCLVGEGLTVKISDFGLSRDIYSADYYRVQSKSLLPVRW--MPPEA  197 (283)
T ss_pred             CCHHHHHHHH-HHHHHHHHHHHhCCeeccccccceEEEcCCCcEEECCCcceeeccccccccccCCCcccccc--cCHHH
Confidence                234566 79999999999988       6666       59999997642             234568  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +.+.. ++.++|+|||||++||+++ |..||.+.+..+....+......+.+
T Consensus       198 ~~~~~-~~~~sDv~slG~il~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~  248 (283)
T cd05048         198 ILYGK-FTTESDIWSFGVVLWEIFSYGLQPYYGFSNQEVIEMIRSRQLLPCP  248 (283)
T ss_pred             hccCc-CchhhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCc
Confidence            87755 8999999999999999997 99999887776666555444333333

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor (Ror) subfamily; catalytic (c) domain. The Ror subfamily consists of Ror1, Ror2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimer

>cd05575 STKc_SGK Catalytic domain of the Protein Serine/Threonine Kinase, Serum- and Glucocorticoid-induced Kinase

Probab=99.94  E-value=3.4e-26  Score=181.54  Aligned_cols=161  Identities=16%  Similarity=0.197  Sum_probs=122.3

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHH-HHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGK-QDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++..++|.+.+.   .....+++.+|.. +++.++||||+++++.+        .+....+++|||+.
T Consensus         8 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~~~~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~   79 (323)
T cd05575           8 FGKVLLAKHKADGKFYAVKVLQKKAILKKKEQKHIMAERNVLLKNVKHPFLVGLHYSF--------QTADKLYFVLDYVN   79 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhHHHHHHHHHHHHHhhCCCCCCCCeeEEE--------EeCCEEEEEEcCCC
Confidence            678887 2    233334444332   1223345556655 45789999999999875        44667899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++++...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~g~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~givH~dikp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (323)
T cd05575          80 GGELFFHLQRERSFPEPRARFYA-AEIASALGYLHSLNIIYRDLKPENILLDSQGHVVLTDFGLCKEGIEHSKTTSTFCG  158 (323)
T ss_pred             CCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeCCCCHHHeEECCCCcEEEeccCCCcccccCCCccccccC
Confidence            9998764        34455666 89999999999998       5555       6999999753           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++|+|||||++|+|++|++||.+.+..+....+..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DvwslG~il~ell~g~~pf~~~~~~~~~~~i~~  210 (323)
T cd05575         159 TPEY--LAPEVLRKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRDTAEMYDNILN  210 (323)
T ss_pred             Chhh--cChhhhcCCC-CCccccccccchhhhhhhcCCCCCCCCCHHHHHHHHHc
Confidence            8889  9999998755 89999999999999999999999998887777666654

Serine/Threonine Kinases (STKs), Serum- and Glucocorticoid-induced Kinase (SGK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. There are three isoforms of SGK, named SGK1, SGK2, and SGK3 (also called cytokine-independent survival kinase CISK). SGKs are activated by insulin and growth factors via phosphoinositide 3-kinase and PDK1. They activate ion channels, ion carriers, and the Na-K-ATPase, as well as regulate the activity of enzymes and transcription factors. SGKs play important roles in transport, hormone release, neuroexcitability, cell pr

>cd05617 STKc_aPKC_zeta Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C zeta

Probab=99.94  E-value=7.9e-26  Score=179.85  Aligned_cols=149  Identities=18%  Similarity=0.195  Sum_probs=117.8

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||.     +++..++|.+++.   .....+.+.+|+.++.++ +||||+++++++        .+....+++|||++
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~   79 (327)
T cd05617           8 YAKVLLVRLKKNDQIYAMKVVKKELVHDDEDIDWVQTEKHVFEQASSNPFLVGLHSCF--------QTTSRLFLVIEYVN   79 (327)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhhcCCCCEeeEEEEE--------EeCCEEEEEEeCCC
Confidence            788886     2233445555542   223445678999999888 599999999975        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~~~-~qi~~al~~lH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~g  158 (327)
T cd05617          80 GGDLMFHMQRQRKLPEEHARFYA-AEICIALNFLHERGIIYRDLKLDNVLLDADGHIKLTDYGMCKEGLGPGDTTSTFCG  158 (327)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCCHHHEEEeCCCCEEEeccccceeccCCCCceecccC
Confidence            9998764        34566677 89999999999998       5555       6999999754           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|..||..
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslGvil~ell~g~~pf~~  198 (327)
T cd05617         159 TPNY--IAPEILRGEE-YGFSVDWWALGVLMFEMMAGRSPFDI  198 (327)
T ss_pred             Cccc--CCHHHHCCCC-CCchheeehhHHHHHHHHhCCCCCCc
Confidence            8889  9999998755 89999999999999999999999953

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, zeta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-zeta plays a critical role in activating the glucose transport response. It is activated by glucose, insulin, and exercise through diverse pathways

>cd05597 STKc_DMPK_like Catalytic domain of Myotonic Dystrophy protein kinase-like Protein Serine/Threonine Kinases

Probab=99.94  E-value=4.6e-26  Score=181.47  Aligned_cols=162  Identities=14%  Similarity=0.142  Sum_probs=124.7

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   .....+.+.+|+.+++.++|+||++++++|        .++...+++|||+.+
T Consensus        14 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~g   85 (331)
T cd05597          14 FGEVAVVKMKNTGQVYAMKILNKWEMLKRAETACFREERDVLVNGDRRWITNLHYAF--------QDENNLYLVMDYYVG   85 (331)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHhCCCCCCCceEEEE--------ecCCeEEEEEecCCC
Confidence            677876 2    233345544431   223345678899999999999999999975        456789999999999


Q ss_pred             ccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cc
Q psy7174          77 TTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HV  121 (188)
Q Consensus        77 ~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~  121 (188)
                      ++|..+.         ..++.++ .|++.||+|||+++       |+|+       +||+|||++.            ..
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  164 (331)
T cd05597          86 GDLLTLLSKFEDRLPEDMARFYL-AEMVLAIDSVHQLGYVHRDIKPDNVLLDKNGHIRLADFGSCLRLLADGTVQSNVAV  164 (331)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEECCCCHHHEEECCCCCEEEEECCceeecCCCCCcccccee
Confidence            9998753         3456666 89999999999998       5555       6999999743            24


Q ss_pred             ccccccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||..|  +|||++..    ...++.++|+||+||++|+|++|+.||.+.+..+....+..
T Consensus       165 gt~~y--~aPE~~~~~~~~~~~~~~~~DiwslG~~l~el~~g~~Pf~~~~~~~~~~~i~~  222 (331)
T cd05597         165 GTPDY--ISPEILQAMEDGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  222 (331)
T ss_pred             ccccc--cCHHHHhhccccccCCCCcceeehhhhHHHHHhhCCCCCCCCCHHHHHHHHHc
Confidence            78889  99999863    22378899999999999999999999988777666666643

Serine/Threonine Kinases (STKs), Myotonic Dystrophy protein kinase (DMPK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The DMPK-like subfamily is composed of DMPK and DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK). Three isoforms of MRCK are known, named alpha, beta and gamma. The DMPK gene is implicated in myotonic dystrophy 1 (DM1), an inherited multisystemic disorder with symptoms that include muscle hyperexcitability, progressive muscle weakness and wasting, cataract development, testicular atrophy,

>cd07861 STKc_CDK1_euk Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 1 from higher eukaryotes-like

Probab=99.93  E-value=1.9e-25  Score=173.64  Aligned_cols=148  Identities=32%  Similarity=0.587  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----------HHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----------YSHLRYLENQQILE   96 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----------~~~~~~~~~~qi~~   96 (188)
                      .+.+.+|+.++++++||||+++++++        .++...++++||+.+ ++..+           ...+..++ .|+++
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~-~l~~~~~~~~~~~~~~~~~~~~~~-~qi~~  112 (285)
T cd07861          43 PSTAIREISLLKELQHPNIVCLQDVL--------MQESRLYLIFEFLSM-DLKKYLDSLPKGQYMDAELVKSYL-YQILQ  112 (285)
T ss_pred             hHHHHHHHHHHHhcCCCCEeeeEEEE--------eeCCeEEEEEecCCC-CHHHHHhcCCCCCcCCHHHHHHHH-HHHHH
Confidence            45678999999999999999999986        446788999999974 44332           34455666 89999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      ||.|||+.+       |+|+       +||+|||++..           .++..|  +|||.+.+...++.++|+||+||
T Consensus       113 ~L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slG~  190 (285)
T cd07861         113 GILFCHSRRVLHRDLKPQNLLIDNKGVIKLADFGLARAFGIPVRVYTHEVVTLWY--RAPEVLLGSPRYSTPVDIWSIGT  190 (285)
T ss_pred             HHHHHHhCCeeecCCCHHHEEEcCCCcEEECcccceeecCCCcccccCCcccccc--cChHHhcCCCCcCcHHHHHHHHH
Confidence            999999988       4555       69999997542           346778  99999876545789999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         152 IICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       152 il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +++++++|++||.+.+.......+.+..+.+.+..|
T Consensus       191 il~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (285)
T cd07861         191 IFAEMATKKPLFHGDSEIDQLFRIFRILGTPTEDVW  226 (285)
T ss_pred             HHHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Confidence            999999999999988887777777776666555544

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyclin A complex controls G2

>KOG0607|consensus

Probab=99.93  E-value=4.5e-26  Score=174.73  Aligned_cols=164  Identities=17%  Similarity=0.194  Sum_probs=131.9

Q ss_pred             CccccccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------H
Q psy7174          13 KWSPNTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------Y   83 (188)
Q Consensus        13 ~~~~~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~   83 (188)
                      +.-++|.|.|.....+.+..||++++.+++ |+||++++++|        .++...|+|||-+.||.+...        +
T Consensus       104 ~EYAVKiidKq~gHsR~RvfREVe~f~~Cqgh~nilqLiefF--------Edd~~FYLVfEKm~GGplLshI~~~~~F~E  175 (463)
T KOG0607|consen  104 KEYAVKIIDKQPGHSRSRVFREVETFYQCQGHKNILQLIEFF--------EDDTRFYLVFEKMRGGPLLSHIQKRKHFNE  175 (463)
T ss_pred             hhhhhhhhhcCCchHHHHHHHHHHHHHHhcCCccHHHHHHHh--------cccceEEEEEecccCchHHHHHHHhhhccH
Confidence            334566666666777889999999999997 99999999986        667889999999999987653        3


Q ss_pred             HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCcc------------------cccccccccC
Q psy7174          84 SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIG------------------RHVCTLYCTR  128 (188)
Q Consensus        84 ~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~------------------~~~~~~~y~~  128 (188)
                      .+...+. ++|+.||+|||+++       |+||          +||+||.+.                  +.+|+..|  
T Consensus       176 ~EAs~vv-kdia~aLdFlH~kgIAHRDlKPENiLC~~pn~vsPvKiCDfDLgSg~k~~~~~spastP~L~tPvGSAEf--  252 (463)
T KOG0607|consen  176 REASRVV-KDIASALDFLHTKGIAHRDLKPENILCESPNKVSPVKICDFDLGSGIKLNNDCSPASTPELLTPVGSAEF--  252 (463)
T ss_pred             HHHHHHH-HHHHHHHHHHhhcCcccccCCccceeecCCCCcCceeeeccccccccccCCCCCCCCCccccCcccchhh--
Confidence            3455666 89999999999998       7787          499999863                  25677889  


Q ss_pred             CCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCC---------------hHHHHHHHHhhcCCCCCCCC
Q psy7174         129 GAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGES---------------DLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       129 ~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~---------------~~~~~~~i~~~~~~p~~~~~  187 (188)
                      ||||+..-    ...|+.++|.||||+|+|-|++|.+||.|+-               +...+..|.++.-..|..+|
T Consensus       253 MAPEVVd~fv~qA~~YDKrCDlwSLGvIlYImLsGYpPFvG~Cg~dCGWdrGe~Cr~CQ~~LFesIQEGkYeFPdkdW  330 (463)
T KOG0607|consen  253 MAPEVVDVFVDQATFYDKRCDLWSLGVILYIMLSGYPPFVGHCGADCGWDRGEVCRVCQNKLFESIQEGKYEFPDKDW  330 (463)
T ss_pred             cchhHHhhhccccccccccccHHHHHHHHHHHHhCCCCccCccCCcCCccCCCccHHHHHHHHHHHhccCCcCChhhh
Confidence            99998731    2248999999999999999999999997642               35567777777777777777

>cd05114 PTKc_Tec_Rlk Catalytic domain of the Protein Tyrosine Kinases, Tyrosine kinase expressed in hepatocellular carcinoma and Resting lymphocyte kinase

Probab=99.93  E-value=5.6e-25  Score=168.68  Aligned_cols=140  Identities=19%  Similarity=0.282  Sum_probs=113.7

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl   98 (188)
                      .+++.+|++++++++||||+++++++        .++...+++|||+++|++..+.         ..+..++ .|++.||
T Consensus        43 ~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~l  113 (256)
T cd05114          43 EEDFIEEAKVMMKLSHPKLVQLYGVC--------TQQKPLYIVTEFMENGCLLNYLRQRQGKLSKDMLLSMC-QDVCEGM  113 (256)
T ss_pred             HHHHHHHHHHHHHCCCCCceeEEEEE--------ccCCCEEEEEEcCCCCcHHHHHHhCccCCCHHHHHHHH-HHHHHHH
Confidence            46788999999999999999999975        3456789999999999988752         2345555 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      +|||+++       |+|+       +|++|||.+...            ++..|  +|||.+.+.. ++.++|+||+|++
T Consensus       114 ~~lH~~~i~H~dl~p~ni~i~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~s~G~~  190 (256)
T cd05114         114 EYLERNSFIHRDLAARNCLVSSTGVVKVSDFGMTRYVLDDEYTSSSGAKFPVKW--SPPEVFNFSK-YSSKSDVWSFGVL  190 (256)
T ss_pred             HHHHHCCccccccCcceEEEcCCCeEEECCCCCccccCCCceeccCCCCCchhh--CChhhcccCc-cchhhhhHHHHHH
Confidence            9999988       6665       599999976421            23358  9999987655 8999999999999


Q ss_pred             HHHHHh-CCCCCCCCChHHHHHHHHhhc
Q psy7174         153 ICELLL-KAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       153 l~el~~-g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      +|++++ |++||...+..+....+.+..
T Consensus       191 l~el~~~g~~p~~~~~~~~~~~~i~~~~  218 (256)
T cd05114         191 MWEVFTEGKMPFEKKSNYEVVEMISRGF  218 (256)
T ss_pred             HHHHHcCCCCCCCCCCHHHHHHHHHCCC
Confidence            999999 899998887777776665543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) and Resting lymphocyte kinase (Rlk); catalytic (c) domain. The PTKc family is part of a larger superfamily, that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec and Rlk (also named Txk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin h

>cd05573 STKc_ROCK_NDR_like Catalytic domain of ROCK- and NDR kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=3.7e-26  Score=182.84  Aligned_cols=161  Identities=18%  Similarity=0.254  Sum_probs=127.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   .....+.+.+|+++++.++||||+++++++        .++...+++|||+.+
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~   85 (350)
T cd05573          14 FGEVWLVRDKDTGQVYAMKVLRKSDMIKRNQIAHVRAERDILADADSPWIVKLYYSF--------QDEEHLYLVMEYMPG   85 (350)
T ss_pred             cEEEEEEEECCCCCEEEEEEEEHHHHhhccHHHHHHHHHHHHHhcCCCCccchhhhe--------ecCCeEEEEEcCCCC
Confidence            678887 2    233445544442   124456788999999999999999999865        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------  119 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------  119 (188)
                      ++|..+        ...+..++ .|++.||.|||+.+       |+||       +||+|||++.               
T Consensus        86 ~~L~~~l~~~~~l~~~~~~~i~-~qi~~aL~~LH~~giiH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~  164 (350)
T cd05573          86 GDLMNLLIRKDVFPEETARFYI-AELVLALDSVHKLGFIHRDIKPDNILIDADGHIKLADFGLCKKMNKAKDREYYLNDS  164 (350)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEeecCCCCccCcccCccccccccc
Confidence            998875        24456667 89999999999988       5555       5999999743               


Q ss_pred             -------------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         120 -------------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       120 -------------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                                               ..||..|  +|||++.+.. ++.++|||||||++|+|++|+.||.+.+......+
T Consensus       165 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~Pf~~~~~~~~~~~  241 (350)
T cd05573         165 HNLLFRDNVLVRRRDHKQRRVRANSTVGTPDY--IAPEVLRGTP-YGLECDWWSLGVILYEMLYGFPPFYSDTLQETYNK  241 (350)
T ss_pred             ccccccccccccccccccccccccccccCccc--cCHHHHcCCC-CCCceeeEecchhhhhhccCCCCCCCCCHHHHHHH
Confidence                                     2367889  9999998765 89999999999999999999999998887777666


Q ss_pred             HHh
Q psy7174         175 IFQ  177 (188)
Q Consensus       175 i~~  177 (188)
                      +..
T Consensus       242 i~~  244 (350)
T cd05573         242 IIN  244 (350)
T ss_pred             Hhc
Confidence            654

Serine/Threonine Kinases (STKs), Rho-associated coiled-coil containing protein kinase (ROCK) and Nuclear Dbf2-Related (NDR)-like kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK- and NDR-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include ROCK and ROCK-like proteins such as DMPK, MRCK, and CRIK, as well as NDR and NDR-like proteins such as LATS, CBK1 and Sid2p. ROCK and CRIK are effectors of the small GTPase Rho, while MRCK is an effector of the small GTPase Cdc42. NDR and NDR-like kinases contain an N-terminal regulatory (NTR) domain and an insert within the

>cd05615 STKc_cPKC_alpha Catalytic domain of the Protein Serine/Threonine Kinase, Classical Protein Kinase C alpha

Probab=99.93  E-value=1.6e-25  Score=177.88  Aligned_cols=161  Identities=18%  Similarity=0.171  Sum_probs=124.0

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|.++++.+. |++|+++++++        .++...+++|||+.
T Consensus        13 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~i~~~~~~~--------~~~~~~~lv~Ey~~   84 (323)
T cd05615          13 FGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALQDKPPFLTQLHSCF--------QTVDRLYFVMEYVN   84 (323)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhccCCCchhheeeEE--------ecCCEEEEEEcCCC
Confidence            788887     2333445555442   2233456778999998886 57788888865        44567899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        85 ~g~L~~~i~~~~~l~~~~~~~i~-~qi~~al~~lH~~~ivHrDikp~Nill~~~~~ikL~Dfg~~~~~~~~~~~~~~~~g  163 (323)
T cd05615          85 GGDLMYHIQQVGKFKEPQAVFYA-AEISVGLFFLHRRGIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMVDGVTTRTFCG  163 (323)
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCCHHHeEECCCCCEEEeccccccccCCCCccccCccC
Confidence            9998765        34556666 79999999999988       5555       6999999754           247


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|++||.+.+.......+..
T Consensus       164 t~~y--~aPE~~~~~~-~~~~~DiwslGvil~elltG~~pf~~~~~~~~~~~i~~  215 (323)
T cd05615         164 TPDY--IAPEIIAYQP-YGKSVDWWAYGVLLYEMLAGQPPFDGEDEDELFQSIME  215 (323)
T ss_pred             Cccc--cCHHHHcCCC-CCCccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            8889  9999998755 89999999999999999999999998887766666654

Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, a

>cd05116 PTKc_Syk Catalytic domain of the Protein Tyrosine Kinase, Spleen tyrosine kinase

Probab=99.93  E-value=8.6e-25  Score=167.86  Aligned_cols=146  Identities=15%  Similarity=0.218  Sum_probs=114.8

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+++.+|+.+++.++||||+++++++         .+...++++||++++++..+.        ..+..++ .|++.|
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~a  107 (257)
T cd05116          38 ALKDELLREANVMQQLDNPYIVRMIGIC---------EAESWMLVMELAELGPLNKFLQKNKHVTEKNITELV-HQVSMG  107 (257)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEE---------cCCCcEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHH
Confidence            3456789999999999999999999974         234678999999999987752        3455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCccccccCCCCchhHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      |+|||+++       |.|+       +|++|||++...              ++..|  +|||.+.... ++.++|+|||
T Consensus       108 l~~lH~~~i~H~dlkp~nill~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  184 (257)
T cd05116         108 MKYLEETNFVHRDLAARNVLLVTQHYAKISDFGLSKALGADENYYKAKTHGKWPVKW--YAPECMNYYK-FSSKSDVWSF  184 (257)
T ss_pred             HHHHHHCCEeecccchhhEEEcCCCeEEECCCccccccCCCCCeeeecCCCCCCccc--cCHhHhccCC-cCchhHHHHH
Confidence            99999998       6666       599999986422              12468  8999987654 8899999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ||++||+++ |++||.+.+..+....+.+....+.|
T Consensus       185 G~~l~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~~  220 (257)
T cd05116         185 GVLMWEAFSYGQKPYKGMKGNEVTQMIESGERMECP  220 (257)
T ss_pred             HHHHHHHHhCCCCCCCCCCHHHHHHHHHCCCCCCCC
Confidence            999999997 99999887776666666554433333

Protein Tyrosine Kinase (PTK) family; Spleen tyrosine kinase (Syk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk, together with Zap-70, form the Syk subfamily of kinases which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Syk was first cloned from the spleen, and its function in hematopoietic cells is well-established. Syk is involved in the signaling downstream of activated receptors (including B-cell and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferatio

>cd05618 STKc_aPKC_iota Catalytic domain of the Protein Serine/Threonine Kinase, Atypical Protein Kinase C iota

Probab=99.93  E-value=1.3e-25  Score=178.77  Aligned_cols=148  Identities=18%  Similarity=0.196  Sum_probs=117.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|+.++.++ +||||+++++++        ..+...+++|||+.
T Consensus         8 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~~~~~~--------~~~~~~~lv~E~~~   79 (329)
T cd05618           8 YAKVLLVRLKKTERIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF--------QTESRLFFVIEYVN   79 (329)
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhHhcchhHHHHHHHHHHHHHhcCCCCcCCceeeEE--------EeCCEEEEEEeCCC
Confidence            788886     2334446655553   223445678899988876 799999999975        44668899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++++...        +..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..|
T Consensus        80 ~~~L~~~~~~~~~l~~~~~~~i~-~qi~~~l~~lH~~~ivH~Dikp~Nili~~~~~~kL~DfG~~~~~~~~~~~~~~~~g  158 (329)
T cd05618          80 GGDLMFHMQRQRKLPEEHARFYS-AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG  158 (329)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCCHHHEEECCCCCEEEeeCCccccccCCCCccccccC
Confidence            9998764        33456666 79999999999998       5555       6999999753           347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      |..|  +|||++.+.. ++.++|+||+||++|+|++|+.||.
T Consensus       159 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~Pf~  197 (329)
T cd05618         159 TPNY--IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFD  197 (329)
T ss_pred             Cccc--cCHHHHcCCC-CCCccceecccHHHHHHhhCCCCCc
Confidence            8889  9999998765 8999999999999999999999994

Serine/Threonine Kinases (STKs), Atypical Protein Kinase C (aPKC) subfamily, iota isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The aPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. aPKCs only require phosphatidylserine (PS) for activation. There are two aPKC isoforms, zeta and iota. PKC-iota is directly implicated in carcinogenesis. It is critical to oncogenic signaling mediated by Ras and Bcr-Abl. The PKC-iota gene is the target o

>cd05624 STKc_MRCK_beta Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase beta

Probab=99.93  E-value=7.7e-26  Score=180.19  Aligned_cols=162  Identities=14%  Similarity=0.147  Sum_probs=124.6

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+.+.   .....+.+.+|+.++..++|+||+++++++        .++...+++|||+.+
T Consensus        14 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~l~~~~--------~~~~~~~lv~Ey~~g   85 (331)
T cd05624          14 FGEVAVVKMKHTERIYAMKILNKWEMLKRAETACFREERNVLVNGDCQWITTLHYAF--------QDENYLYLVMDYYVG   85 (331)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHHHhhHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------EcCCEEEEEEeCCCC
Confidence            677776     2233345544432   122334577899999999999999999975        456788999999999


Q ss_pred             ccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cc
Q psy7174          77 TTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HV  121 (188)
Q Consensus        77 ~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~  121 (188)
                      |+|..+.         ..+..++ .|++.||+|||+.+       |+|+       +||+|||++.            ..
T Consensus        86 g~L~~~l~~~~~~l~~~~~~~~~-~qi~~~L~~lH~~~iiHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~  164 (331)
T cd05624          86 GDLLTLLSKFEDRLPEDMARFYI-AEMVLAIHSIHQLHYVHRDIKPDNVLLDMNGHIRLADFGSCLKMNQDGTVQSSVAV  164 (331)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeccCchHHEEEcCCCCEEEEeccceeeccCCCceeecccc
Confidence            9998753         3355566 79999999999988       5555       6999999743            35


Q ss_pred             ccccccCCCCcccccc----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |+..|  +|||++...    ..++.++|+||+||++|+|++|+.||.+.+..+...++..
T Consensus       165 gt~~y--~aPE~~~~~~~~~~~~~~~~DiwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~  222 (331)
T cd05624         165 GTPDY--ISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  222 (331)
T ss_pred             CCccc--CCHHHHhccccCCCCCCCcccEEeeehhhhhhhhCCCCccCCCHHHHHHHHHc
Confidence            78889  999998642    2378899999999999999999999998887777666654

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) beta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKbeta is expressed ubiquitously in many tissues.

>cd05115 PTKc_Zap-70 Catalytic domain of the Protein Tyrosine Kinase, Zeta-chain-associated protein of 70kDa

Probab=99.93  E-value=9.3e-25  Score=167.93  Aligned_cols=140  Identities=17%  Similarity=0.235  Sum_probs=112.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|++++++++||||+++++++         .....++++||++++++..+.         ..+..++ .|++.
T Consensus        37 ~~~~~~~~E~~~l~~l~h~~ii~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~  106 (257)
T cd05115          37 SVRDEMMREAEIMHQLDNPYIVRMIGVC---------EAEALMLVMEMASGGPLNKFLSGKKDEITVSNVVELM-HQVSM  106 (257)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeEEEEEEE---------cCCCeEEEEEeCCCCCHHHHHHhCCCCCCHHHHHHHH-HHHHH
Confidence            3446688999999999999999999974         234679999999999998752         3455666 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCccccccCCCCchhHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ||.|||+++       |.|+       +|++|||++...              ++..|  +|||.+.... ++.++|+||
T Consensus       107 ~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~s  183 (257)
T cd05115         107 GMKYLEGKNFVHRDLAARNVLLVNQHYAKISDFGLSKALGADDSYYKARSAGKWPLKW--YAPECINFRK-FSSRSDVWS  183 (257)
T ss_pred             HHHHHHhcCeeecccchheEEEcCCCcEEeccCCccccccCCccceeccCCCCCCccc--CCHHHHccCC-CCchhhHHH
Confidence            999999998       6666       599999986421              13468  9999987655 899999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         149 VGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       149 lG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |||++|++++ |.+||.+.+..+....+.+.
T Consensus       184 lG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  214 (257)
T cd05115         184 YGITMWEAFSYGQKPYKKMKGPEVMSFIEQG  214 (257)
T ss_pred             HHHHHHHHhcCCCCCcCcCCHHHHHHHHHCC
Confidence            9999999996 99999887776665555443

Protein Tyrosine Kinase (PTK) family; Zeta-chain-associated protein of 70kDa (Zap-70); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Zap-70 is a member of the Syk subfamily of kinases, which are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. Zap-70 is primarily expressed in T-cells and NK cells, and is a crucial component in T-cell receptor (TCR) signaling. Zap-70 binds the phosphorylated ITAM (immunoreceptor tyr activation motif) sequences of the activated TCR zeta-chain through its SH2 domains, leading to its pho

>cd05049 PTKc_Trk Catalytic domain of the Protein Tyrosine Kinases, Tropomyosin Related Kinases

Probab=99.93  E-value=7e-25  Score=170.02  Aligned_cols=142  Identities=18%  Similarity=0.246  Sum_probs=114.8

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH----------------------
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS----------------------   84 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~----------------------   84 (188)
                      ..+.+.+|++++++++||||+++++++        ..+...++++||+++++|..+..                      
T Consensus        51 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~l~~~  122 (280)
T cd05049          51 ARKDFEREAELLTNFQHENIVKFYGVC--------TEGDPPIMVFEYMEHGDLNKFLRSHGPDAAFLKSPDSPMGELTLS  122 (280)
T ss_pred             HHHHHHHHHHHHHhcCCCCchheeeEE--------ecCCCeEEEEecCCCCCHHHHHHhcCCchhhhcccccccccccHH
Confidence            457889999999999999999999975        34567899999999999877532                      


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCcccccc
Q psy7174          85 HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGA  137 (188)
Q Consensus        85 ~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~  137 (188)
                      .+..++ .|++.|+.|||+++       |+|+       +|++|||++...             ++..|  +|||++.+.
T Consensus       123 ~~~~~~-~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~  199 (280)
T cd05049         123 QLLQIA-VQIASGMVYLASQHFVHRDLATRNCLVGYDLVVKIGDFGMSRDVYTTDYYRVGGHTMLPIRW--MPPESIMYR  199 (280)
T ss_pred             HHHHHH-HHHHHHHHHHhhCCeeccccccceEEEcCCCeEEECCcccceecccCcceecCCCCccccee--cChhhhccC
Confidence            344556 79999999999988       6666       599999976421             23468  999999876


Q ss_pred             CCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Q psy7174         138 RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       138 ~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      . ++.++|+||+||++|+|++ |..||.+.+..+....+.+...
T Consensus       200 ~-~~~~~Di~slG~il~e~~~~g~~p~~~~~~~~~~~~~~~~~~  242 (280)
T cd05049         200 K-FTTESDVWSFGVVLWEIFTYGKQPWYGLSNEEVIECITQGRL  242 (280)
T ss_pred             C-cchhhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCc
Confidence            5 8999999999999999998 9999988777666666654433

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase (Trk) subfamily; catalytic (c) domain. The Trk subfamily consists of TrkA, TrkB, TrkC, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Trk subfamily members are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, the nerve growth factor (NGF) family of neutrotrophins, leads to Trk receptor oligomerization and activation of the catalyt

>cd05090 PTKc_Ror1 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 1

Probab=99.93  E-value=9.7e-25  Score=169.77  Aligned_cols=139  Identities=16%  Similarity=0.269  Sum_probs=111.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------------------
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------------------   83 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------------------   83 (188)
                      .....+.+|++++++++||||+++++++        ..+...++++||++++++..+.                      
T Consensus        49 ~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  120 (283)
T cd05090          49 QQWGEFQQEASLMAELHHPNIVCLLGVV--------TQEQPVCMLFEYLNQGDLHEFLIMRSPHSDVGCSSDEDGTVKSS  120 (283)
T ss_pred             HHHHHHHHHHHHHhhCCCCCeeeEEEEE--------ecCCceEEEEEcCCCCcHHHHHHhcCCCCccccccccccccccc
Confidence            3346788999999999999999999975        4456789999999999987753                      


Q ss_pred             ---HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCcc
Q psy7174          84 ---SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPEL  133 (188)
Q Consensus        84 ---~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~  133 (188)
                         ..+..++ .|++.||.|||+++       |+|+       +|++|||+++..             ++..|  +|||.
T Consensus       121 ~~~~~~~~i~-~~i~~al~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~  197 (283)
T cd05090         121 LDHGDFLHIA-IQIAAGMEYLSSHFFVHKDLAARNILIGEQLHVKISDLGLSREIYSADYYRVQPKSLLPIRW--MPPEA  197 (283)
T ss_pred             cCHHHHHHHH-HHHHHHHHHHHhcCeehhccccceEEEcCCCcEEeccccccccccCCcceecccCCCcccee--cChHH
Confidence               1234455 79999999999998       6666       599999986422             23458  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      +.+.. ++.++|+|||||++|||++ |.+||.+.++......+.
T Consensus       198 ~~~~~-~~~~~Dv~slG~il~el~~~g~~p~~~~~~~~~~~~~~  240 (283)
T cd05090         198 IMYGK-FSSDSDIWSFGVVLWEIFSFGLQPYYGFSNQEVIEMVR  240 (283)
T ss_pred             hccCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            87655 8999999999999999998 999998876655544443

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 1 (Ror1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd07844 STKc_PCTAIRE_like Catalytic domain of PCTAIRE-like Serine/Threonine Kinases

Probab=99.93  E-value=6.7e-25  Score=171.20  Aligned_cols=172  Identities=29%  Similarity=0.530  Sum_probs=127.2

Q ss_pred             cccccc-cCC-cccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QSK-WSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~~-~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      +|.||+ ..+ ....+++|..    .......+.+|++++++++||||+++++++        .++...++++||+.+ +
T Consensus        18 ~~~vy~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~-~   88 (291)
T cd07844          18 YATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHANIVTLHDII--------HTKKTLTLVFEYLDT-D   88 (291)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecccccCCchhHHHHHHHHhhCCCcceeeEEEEE--------ecCCeEEEEEecCCC-C
Confidence            677777 222 1123444432    122234567899999999999999999975        456788999999985 6


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-----------cccc
Q psy7174          79 KARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-----------VCTL  124 (188)
Q Consensus        79 l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~  124 (188)
                      +..+         ...+..++ .|+++||.|||+++       |+|+       +|++|||++..           .++.
T Consensus        89 L~~~~~~~~~~~~~~~~~~~~-~ql~~al~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  167 (291)
T cd07844          89 LKQYMDDCGGGLSMHNVRLFL-FQLLRGLAYCHQRRVLHRDLKPQNLLISERGELKLADFGLARAKSVPSKTYSNEVVTL  167 (291)
T ss_pred             HHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecccCCHHHEEEcCCCCEEECccccccccCCCCcccccccccc
Confidence            6553         24566666 79999999999988       3333       69999997542           2456


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC-hHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES-DLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~-~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||.+.+...++.++|+||+|+++|+|++|++||.+.. ..+.+..+....+.|.+..||
T Consensus       168 ~~--~aPE~~~~~~~~~~~~Dv~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (291)
T cd07844         168 WY--RPPDVLLGSTEYSTSLDMWGVGCIFYEMATGRPLFPGSTDVEDQLHKIFRVLGTPTEETWP  230 (291)
T ss_pred             cc--CCcHHhhcCcccCcHHHHHHHHHHHHHHHhCCCCCCCCccHHHHHHHHHHhcCCCChhhhh
Confidence            78  999998764448899999999999999999999998765 566677777777777666653

Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as the

>KOG4645|consensus

Probab=99.93  E-value=4e-27  Score=205.21  Aligned_cols=170  Identities=19%  Similarity=0.242  Sum_probs=131.9

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||+||- .    +..-++|-|+-+  ..+..+.+.+|..+|..++|||+|+++|+=        .++...+|.||||.+|
T Consensus      1248 fG~VYtavN~~tGellAvKEI~iq~~~~k~~~~i~eEm~vlE~lnHpNlV~YyGVE--------vHRekv~IFMEyC~~G 1319 (1509)
T KOG4645|consen 1248 FGKVYTAVNLDTGELLAVKEIKIQDSDHKTFKLIAEEMKVLEGLNHPNLVRYYGVE--------VHREKVYIFMEYCEGG 1319 (1509)
T ss_pred             eeeeEEeecCCccchhhhhhhhcCccccccCcchHHHHHHHHhccCccccccCcee--------ecHHHHHHHHHHhccC
Confidence            788887 2    222235545544  334456788999999999999999999972        5567889999999999


Q ss_pred             cHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------c
Q psy7174          78 TKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------H  120 (188)
Q Consensus        78 ~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------~  120 (188)
                      +|..+.        ...+.+. .|+++|+.|||++|       |+||       +|..|||.+.               .
T Consensus      1320 sLa~ll~~gri~dE~vt~vyt-~qll~gla~LH~~gIVHRDIK~aNI~Ld~~g~iK~~DFGsa~ki~~~~~~~~~el~~~ 1398 (1509)
T KOG4645|consen 1320 SLASLLEHGRIEDEMVTRVYT-KQLLEGLAYLHEHGIVHRDIKPANILLDFNGLIKYGDFGSAVKIKNNAQTMPGELQSM 1398 (1509)
T ss_pred             cHHHHHHhcchhhhhHHHHHH-HHHHHHHHHHHhcCceecCCCccceeeecCCcEEeecccceeEecCchhcCCHHHHhh
Confidence            999862        3456677 79999999999999       6666       5999999643               6


Q ss_pred             cccccccCCCCccccccC--CCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhhcCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~~~~p~~~  185 (188)
                      .||+.|  ||||++.+..  +...+.|||||||+..||+||+.||... ++...+-++..+-.++.|+
T Consensus      1399 ~GT~~Y--MAPEvit~t~~kG~~~A~DiWslGCVVlEM~tGkrPW~~~dne~aIMy~V~~gh~Pq~P~ 1464 (1509)
T KOG4645|consen 1399 MGTPMY--MAPEVITGTKGKGHGGAADIWSLGCVVLEMATGKRPWAELDNEWAIMYHVAAGHKPQIPE 1464 (1509)
T ss_pred             cCCchh--cCchhhcccccCCCCcchhhhcccceEEEeecCCCchhhccchhHHHhHHhccCCCCCch
Confidence            799999  9999997643  3567899999999999999999999874 4555566665555454443

>KOG4236|consensus

Probab=99.93  E-value=1.7e-26  Score=186.87  Aligned_cols=170  Identities=20%  Similarity=0.216  Sum_probs=134.2

Q ss_pred             ccccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           4 VCFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         4 ~~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      .||.||-     +++.+++|.|.|.  ..+...++++|+.||+.++||.||.+--.|        ......++|||-+.|
T Consensus       576 QFG~VYgg~hRktGrdVAvKvIdKlrFp~kqesqlR~EVaILq~l~HPGiV~le~M~--------ET~ervFVVMEKl~G  647 (888)
T KOG4236|consen  576 QFGTVYGGKHRKTGRDVAVKVIDKLRFPTKQESQLRNEVAILQNLHHPGIVNLECMF--------ETPERVFVVMEKLHG  647 (888)
T ss_pred             cceeeecceecccCceeeeeeeecccCCCchHHHHHHHHHHHHhcCCCCeeEEEEee--------cCCceEEEEehhhcc
Confidence            3677775     5667778877774  566678899999999999999999997654        456788999999988


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------c
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------H  120 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~  120 (188)
                      ..|.-+         +...++++ .||+.||.|||.++       |+|+          +|+||||+++          .
T Consensus       648 DMLEMILSsEkgRL~er~TkFlv-tQIL~ALr~LH~knIvHCDLKPENVLLas~~~FPQvKlCDFGfARiIgEksFRrsV  726 (888)
T KOG4236|consen  648 DMLEMILSSEKGRLPERITKFLV-TQILVALRYLHFKNIVHCDLKPENVLLASASPFPQVKLCDFGFARIIGEKSFRRSV  726 (888)
T ss_pred             hHHHHHHHhhcccchHHHHHHHH-HHHHHHHHHhhhcceeeccCCchheeeccCCCCCceeeccccceeecchhhhhhhh
Confidence            887654         23355566 89999999999998       7887          4999999865          5


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +||+.|  +|||++.+.. |+...||||+|+|+|..++|..||..+.+  .-.+|..+-..-||.-|
T Consensus       727 VGTPAY--LaPEVLrnkG-yNrSLDMWSVGVIiYVsLSGTFPFNEdEd--IndQIQNAaFMyPp~PW  788 (888)
T KOG4236|consen  727 VGTPAY--LAPEVLRNKG-YNRSLDMWSVGVIIYVSLSGTFPFNEDED--INDQIQNAAFMYPPNPW  788 (888)
T ss_pred             cCCccc--cCHHHHhhcc-ccccccceeeeEEEEEEecccccCCCccc--hhHHhhccccccCCCch
Confidence            789999  9999999866 99999999999999999999999965433  44455444333344434

>PLN00034 mitogen-activated protein kinase kinase; Provisional

Probab=99.93  E-value=2.6e-25  Score=178.52  Aligned_cols=150  Identities=18%  Similarity=0.187  Sum_probs=115.1

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .....+.+.+|+++++.++|+||+++++++        ..+...++++||+.+++
T Consensus        87 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~  158 (353)
T PLN00034         87 GGTVYKVIHRPTGRLYALKVIYGNHEDTVRRQICREIEILRDVNHPNVVKCHDMF--------DHNGEIQVLLEFMDGGS  158 (353)
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCCcHHHHHHHHHHHHHHHhCCCCCcceeeeEe--------ccCCeEEEEEecCCCCc
Confidence            677887 2    233345444332 334456789999999999999999999975        44667899999999998


Q ss_pred             HHHH----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCC
Q psy7174          79 KARF----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRG  129 (188)
Q Consensus        79 l~~~----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~  129 (188)
                      +...    +..+..++ .|++.||.|||+++       ++||       +||+|||++.           ..||..|  +
T Consensus       159 L~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DfG~~~~~~~~~~~~~~~~gt~~y--~  235 (353)
T PLN00034        159 LEGTHIADEQFLADVA-RQILSGIAYLHRRHIVHRDIKPSNLLINSAKNVKIADFGVSRILAQTMDPCNSSVGTIAY--M  235 (353)
T ss_pred             ccccccCCHHHHHHHH-HHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEcccccceecccccccccccccCccc--c
Confidence            8653    34455677 89999999999988       4455       6999999754           3577889  9


Q ss_pred             CCcccccc----CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         130 APELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       130 aPe~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      |||.+...    ...+.++|||||||++|||++|+.||..
T Consensus       236 aPE~~~~~~~~~~~~~~~~DvwslGvil~el~~g~~pf~~  275 (353)
T PLN00034        236 SPERINTDLNHGAYDGYAGDIWSLGVSILEFYLGRFPFGV  275 (353)
T ss_pred             CccccccccccCcCCCcchhHHHHHHHHHHHHhCCCCCCC
Confidence            99987432    2235689999999999999999999964

>cd05607 STKc_GRK7 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 7

Probab=99.93  E-value=4.5e-25  Score=171.52  Aligned_cols=151  Identities=18%  Similarity=0.158  Sum_probs=115.7

Q ss_pred             cccccc-cC----Cccccccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ ..    +..++|.+.+..   ....+.+..|++++++++||||+++++++        .++...+++|||+.+
T Consensus         6 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~il~~l~hp~i~~~~~~~--------~~~~~~~lv~e~~~g   77 (277)
T cd05607           6 FGEVCAVQVKNTGKMYACKKLDKKRLKKKSGEKMALLEKEILEKVNSPFIVNLAYAF--------ESKTHLCLVMSLMNG   77 (277)
T ss_pred             ceEEEEEEEccCCcEEEEEEEcHHHhhcchhhHHHHHHHHHHHhcCCCcEEEEEEEE--------ecCCeEEEEEecCCC
Confidence            788887 22    223333333321   11234456799999999999999999875        446688999999999


Q ss_pred             ccHHHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccc
Q psy7174          77 TTKARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        77 ~~l~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~  122 (188)
                      +++....          ..+..++ .|++.||+|||+.+       |+|+       +||+|||++.          ..+
T Consensus        78 ~~L~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivH~dikp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~  156 (277)
T cd05607          78 GDLKYHIYNVGERGLEMERVIHYS-AQITCGILHLHSMDIVYRDMKPENVLLDDQGNCRLSDLGLAVELKDGKTITQRAG  156 (277)
T ss_pred             CCHHHHHHhccccCCCHHHHHHHH-HHHHHHHHHHHHCCEEEccCChHhEEEcCCCCEEEeeceeeeecCCCceeeccCC
Confidence            9987542          3344556 79999999999988       6665       5999999754          346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      +..|  +|||++.+.. ++.++|+||+||++|++++|+.||.+..
T Consensus       157 ~~~y--~aPE~~~~~~-~~~~~DvwslGv~l~el~~g~~p~~~~~  198 (277)
T cd05607         157 TNGY--MAPEILKEEP-YSYPVDWFAMGCSIYEMVAGRTPFKDHK  198 (277)
T ss_pred             CCCc--cCHHHHccCC-CCCchhHHHHHHHHHHHHhCCCCCCCCc
Confidence            7789  9999998766 9999999999999999999999997643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK7 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK7, also called iodopsin kinase, belongs to the visual gr

>cd05601 STKc_CRIK Catalytic domain of the Protein Serine/Threonine Kinase, Citron Rho-interacting kinase

Probab=99.93  E-value=5e-26  Score=180.96  Aligned_cols=162  Identities=15%  Similarity=0.135  Sum_probs=125.5

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     .++..++|.+++.   .....+.+.+|+.+++.++||||+++++++        .++...+++|||+.+
T Consensus        14 ~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~i~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~   85 (330)
T cd05601          14 FGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDILSISNSPWIPQLQYAF--------QDKDNLYLVMEYQPG   85 (330)
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCCcceeeEE--------ecCCeEEEEECCCCC
Confidence            677886     2233345544442   223445678899999999999999999875        445678999999999


Q ss_pred             ccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cc
Q psy7174          77 TTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HV  121 (188)
Q Consensus        77 ~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~  121 (188)
                      ++|..+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.            ..
T Consensus        86 ~~L~~~l~~~~~~l~~~~~~~~~-~qi~~aL~~lH~~~i~H~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~  164 (330)
T cd05601          86 GDLLSLLNRYEDQFDEDMAQFYL-AELVLAIHSVHQMGYVHRDIKPENVLIDRTGHIKLADFGSAARLTANKMVNSKLPV  164 (330)
T ss_pred             CCHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEcccCchHheEECCCCCEEeccCCCCeECCCCCceeeeccc
Confidence            9998763         3455566 79999999999988       6666       5999999754            24


Q ss_pred             ccccccCCCCccccc-----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFG-----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||..|  +|||++..     ...++.++||||+||++|+|++|+.||.+.+....+.++..
T Consensus       165 gt~~y--~aPE~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~Pf~~~~~~~~~~~i~~  223 (330)
T cd05601         165 GTPDY--IAPEVLTTMNGDGKGTYGVECDWWSLGVIAYEMIYGRSPFHEGTSAKTYNNIMN  223 (330)
T ss_pred             CCccc--cCHHHhccccccccCCCCCcceeecccceeeeeccCCCCCCCCCHHHHHHHHHc
Confidence            67889  99999863     23378899999999999999999999988877776666654

Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnor

>cd07832 STKc_CCRK Catalytic domain of the Serine/Threonine Kinase, Cell Cycle-Related Kinase

Probab=99.93  E-value=5.3e-25  Score=171.05  Aligned_cols=150  Identities=36%  Similarity=0.654  Sum_probs=124.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~~~~~~~~~~qi~~g   97 (188)
                      ..+.+.+|+.++++++||||+++++++        ..+...++++||+ ++++..+         +..+..++ .|++.|
T Consensus        42 ~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~~v~e~~-~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~  111 (286)
T cd07832          42 IPNQALREIKALQACQHPYVVKLLDVF--------PHGSGFVLVMEYM-PSDLSEVLRDEERPLPEAQVKSYM-RMLLKG  111 (286)
T ss_pred             hhHHHHHHHHHHHhCCCCCCcceeeEE--------ecCCeeEEEeccc-CCCHHHHHHhcCCCCCHHHHHHHH-HHHHHH
Confidence            456789999999999999999999975        4467889999999 8888764         24456677 899999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc------------ccccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      |.|||+.+       |+|+       ++++|||++.            ..++..|  +|||.+.+...++.++||||+||
T Consensus       112 l~~lH~~~i~H~dl~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~  189 (286)
T cd07832         112 VAYMHANGIMHRDLKPANLLISADGVLKIADFGLARLFSEEEPRLYSHQVATRWY--RAPELLYGARKYDPGVDLWAVGC  189 (286)
T ss_pred             HHHHHHCCeecCCcCHHHEEEcCCCcEEEeeeeecccccCCCCCccccccCcccc--cCceeeeccccCCchhHHHHHHH
Confidence            99999988       4444       6899999643            2356678  99999876555789999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         152 IICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       152 il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +++++++|.+||.+.++...+..+...++.|.+..||
T Consensus       190 ~l~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  226 (286)
T cd07832         190 IFAELLNGSPLFPGENDIEQLAIVFRTLGTPNEETWP  226 (286)
T ss_pred             HHHHHHcCCcCcCCCCHHHHHHHHHHHcCCCChHHHh
Confidence            9999999999999998888888888888887776664

Serine/Threonine Kinases (STKs), Cell Cycle-Related Kinase (CCRK) p42 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CCRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CCRK was previously called p42. It is a Cyclin-Dependent Kinase (CDK)-Activating Kinase (CAK) which is essential for the activation of CDK2. It is indispensable for cell growth and has been implicated in the progression of glioblastoma multiforme. In the heart, a splice variant of CCRK with a different C-terminal half is expressed, this variant promotes cardiac cell growth and survival and is significantly down-regulated during the development of hea

>cd06650 PKc_MEK1 Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase 1

Probab=99.93  E-value=3.6e-25  Score=176.52  Aligned_cols=133  Identities=19%  Similarity=0.276  Sum_probs=109.9

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|++++++++||||++++++|        .++...++++||+.+++|..+.        ..+..+. .|++.|
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~~l~~~  115 (333)
T cd06650          45 AIRNQIIRELQVLHECNSPYIVGFYGAF--------YSDGEISICMEHMDGGSLDQVLKKAGRIPEQILGKVS-IAVIKG  115 (333)
T ss_pred             HHHHHHHHHHHHHHHCCCCcccceeEEE--------EECCEEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHH
Confidence            3446788999999999999999999986        4466889999999999998763        3345566 799999


Q ss_pred             HHHHhhc-C-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSS-M-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~-~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      |.|||+. +       |+|+       +|++|||++.         ..++..|  +|||++.+.. ++.++|+||+||++
T Consensus       116 l~~lH~~~~ivH~dlkp~Nili~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~DvwslG~il  192 (333)
T cd06650         116 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY--MSPERLQGTH-YSVQSDIWSMGLSL  192 (333)
T ss_pred             HHHHHhcCCEEecCCChhhEEEcCCCCEEEeeCCcchhhhhhccccCCCCccc--cCHHHhcCCC-CCcHHHHHHHHHHH
Confidence            9999975 3       5555       6999999754         3467889  9999998755 89999999999999


Q ss_pred             HHHHhCCCCCCCCChHH
Q psy7174         154 CELLLKAPFLPGESDLD  170 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~  170 (188)
                      |++++|+.||.......
T Consensus       193 ~~l~~g~~p~~~~~~~~  209 (333)
T cd06650         193 VEMAIGRYPIPPPDAKE  209 (333)
T ss_pred             HHHHHCCCCCCCcchhH
Confidence            99999999998665533

Protein kinases (PKs), MAP/ERK kinase (MEK) 1 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 is a dual-specificity PK that phosphorylates and activates the downst

>cd05052 PTKc_Abl Catalytic domain of the Protein Tyrosine Kinase, Abelson kinase

Probab=99.93  E-value=8.3e-25  Score=168.46  Aligned_cols=144  Identities=18%  Similarity=0.251  Sum_probs=114.1

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|++++++++||||+++++++        ..+...++++||++++++..+.          ..+..++ .|+++
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~-~ql~~  115 (263)
T cd05052          45 EVEEFLKEAAVMKEIKHPNLVQLLGVC--------TREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMA-TQISS  115 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCChhheEEEE--------cCCCCcEEEEEeCCCCcHHHHHHhCCCCCCCHHHHHHHH-HHHHH
Confidence            346788999999999999999999976        3456789999999999998752          2345556 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ||.|||+.+       |+|+       +|++|||++...            ++..|  +|||.+.+.. ++.++||||||
T Consensus       116 ~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~slG  192 (263)
T cd05052         116 AMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKW--TAPESLAYNK-FSIKSDVWAFG  192 (263)
T ss_pred             HHHHHHhCCEeecccCcceEEEcCCCcEEeCCCccccccccceeeccCCCCCcccc--CCHHHhccCC-CCchhHHHHHH
Confidence            999999988       6665       599999975432            23458  9999987655 88999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      |++|+|++ |.+||.+.+..+....+......+
T Consensus       193 ~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  225 (263)
T cd05052         193 VLLWEIATYGMSPYPGIDLSQVYELLEKGYRME  225 (263)
T ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHHHCCCCCC
Confidence            99999998 999998877666555555444333

Protein Tyrosine Kinase (PTK) family; Abelson (Abl) kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Abl (or c-Abl) is a ubiquitously-expressed cytoplasmic (or nonreceptor) tyr kinase that contains SH3, SH2, and tyr kinase domains in its N-terminal region, as well as nuclear localization motifs, a putative DNA-binding domain, and F- and G-actin binding domains in its C-terminal tail. It also contains a short autoinhibitory cap region in its N-terminus. Abl is normally inactive and requires phosphorylation and myristoylation for activation. Abl function depends on its subcellular localization. In the cytoplasm, Abl plays

>KOG0604|consensus

Probab=99.93  E-value=7.3e-26  Score=172.12  Aligned_cols=155  Identities=21%  Similarity=0.207  Sum_probs=119.6

Q ss_pred             hhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQ   93 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~q   93 (188)
                      ..+.++++||+++.-+.. |||||+++++|-    .+.....-+.+|||.+.||.|..-          +.+..-++ +|
T Consensus        95 L~Ds~KARrEVeLHw~~s~h~~iV~IidVye----Ns~~~rkcLLiVmE~meGGeLfsriq~~g~~afTErea~eI~-~q  169 (400)
T KOG0604|consen   95 LLDSPKARREVELHWMASGHPHIVSIIDVYE----NSYQGRKCLLIVMECMEGGELFSRIQDRGDQAFTEREASEIM-KQ  169 (400)
T ss_pred             HhcCHHHHhHhhhhhhhcCCCceEEeehhhh----hhccCceeeEeeeecccchHHHHHHHHcccccchHHHHHHHH-HH
Confidence            345678999999887765 999999999862    244555667899999999998652          34566677 89


Q ss_pred             HHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHH
Q psy7174          94 ILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDM  146 (188)
Q Consensus        94 i~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~Di  146 (188)
                      |..|+.|||+.+       |+|+          +|++|||+++          .+.|++|  .|||++-..+ |+..+|+
T Consensus       170 I~~Av~~lH~~nIAHRDlKpENLLyt~t~~na~lKLtDfGFAK~t~~~~~L~TPc~TPyY--vaPevlg~eK-ydkscdm  246 (400)
T KOG0604|consen  170 IGLAVRYLHSMNIAHRDLKPENLLYTTTSPNAPLKLTDFGFAKETQEPGDLMTPCFTPYY--VAPEVLGPEK-YDKSCDM  246 (400)
T ss_pred             HHHHHHHHHhcchhhccCChhheeeecCCCCcceEecccccccccCCCccccCCcccccc--cCHHHhCchh-cCCCCCc
Confidence            999999999988       5565          6999999854          3457788  9999997766 9999999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHhhcCCCCCCCC
Q psy7174         147 WAVGCIICELLLKAPFLPGES----DLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       147 wslG~il~el~~g~~pf~~~~----~~~~~~~i~~~~~~p~~~~~  187 (188)
                      ||+||++|-|++|.|||.+..    ...+-.+|-.+.-..|.++|
T Consensus       247 wSlgVimYIlLCGyPPFYS~hg~aispgMk~rI~~gqy~FP~pEW  291 (400)
T KOG0604|consen  247 WSLGVIMYILLCGYPPFYSNHGLAISPGMKRRIRTGQYEFPEPEW  291 (400)
T ss_pred             cchhHHHHHhhcCCCcccccCCccCChhHHhHhhccCccCCChhH
Confidence            999999999999999997643    23444455444444444445

>cd05614 STKc_MSK2_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 2

Probab=99.93  E-value=1.1e-25  Score=179.15  Aligned_cols=151  Identities=16%  Similarity=0.201  Sum_probs=117.1

Q ss_pred             cccccc--------cCCcccccccccc----chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ--------QSKWSPNTPMARC----DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~--------~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||.        .++..++|.+++.    .....+.+.+|+++++.++ ||||+++++++        ..+...+++|
T Consensus        13 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~--------~~~~~~~lv~   84 (332)
T cd05614          13 YGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQSPFLVTLHYAF--------QTEAKLHLIL   84 (332)
T ss_pred             CEEEEEEEEcccCCCCCEEEEEEEEHHHHhhhhhHHHHHHHHHHHHHhccCCCCcccEEEEE--------ecCCEEEEEE
Confidence            677875        1223334544442    1223456788999999995 99999999875        4466789999


Q ss_pred             eccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          72 KIFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        72 e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      ||+.+|++...        +..+..++ .|++.||.|||+.+       |+||       +||+|||++.          
T Consensus        85 e~~~~g~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivHrDlkp~Nili~~~~~~kl~DfG~~~~~~~~~~~~~  163 (332)
T cd05614          85 DYVSGGEMFTHLYQRDNFSEDEVRFYS-GEIILALEHLHKLGIVYRDIKLENILLDSEGHVVLTDFGLSKEFLSEEKERT  163 (332)
T ss_pred             eCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCcEecCCCHHHeEECCCCCEEEeeCcCCccccccCCCcc
Confidence            99999998765        34566677 79999999999988       5555       6999999754          


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                        ..||..|  +|||++.+...++.++||||+||++|+|++|+.||...
T Consensus       164 ~~~~gt~~y--~aPE~~~~~~~~~~~~DiwslG~il~elltg~~pf~~~  210 (332)
T cd05614         164 YSFCGTIEY--MAPEIIRGKGGHGKAVDWWSLGILIFELLTGASPFTLE  210 (332)
T ss_pred             ccccCCccc--cCHHHhcCCCCCCCccccccchhhhhhhhcCCCCCCCC
Confidence              3478889  99999976544788999999999999999999999643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>cd05072 PTKc_Lyn Catalytic domain of the Protein Tyrosine Kinase, Lyn

Probab=99.93  E-value=9.9e-25  Score=167.65  Aligned_cols=144  Identities=19%  Similarity=0.314  Sum_probs=114.5

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|+.++++++|+||+++++++        ..+...++++||++++++..+.          ..+..++ .|+++
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~-~~l~~  114 (261)
T cd05072          44 SVQAFLEEANLMKTLQHDKLVRLYAVV--------TKEEPIYIITEYMAKGSLLDFLKSDEGGKVLLPKLIDFS-AQIAE  114 (261)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEE--------cCCCCcEEEEecCCCCcHHHHHHHhcCCCCCHHHHHHHH-HHHHH
Confidence            356789999999999999999999875        4466789999999999987752          2344566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ||.|||+.+       |+|+       +|++|||++...            ++..|  +|||.+.... ++.++|+||+|
T Consensus       115 ~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG  191 (261)
T cd05072         115 GMAYIERKNYIHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKW--TAPEAINFGS-FTIKSDVWSFG  191 (261)
T ss_pred             HHHHHHHCCeeccccchhhEEecCCCcEEECCCccceecCCCceeccCCCccceec--CCHHHhccCC-CChhhhhhhhH
Confidence            999999988       5565       599999986522            23458  9999987755 88999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      |++|++++ |..||.+.+..+....+......|
T Consensus       192 ~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~  224 (261)
T cd05072         192 ILLYEIVTYGKIPYPGMSNSDVMSALQRGYRMP  224 (261)
T ss_pred             HHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            99999998 999998877666666555444333

Protein Tyrosine Kinase (PTK) family; Lyn kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lyn is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine and growth fa

>cd05623 STKc_MRCK_alpha Catalytic domain of the Protein Serine/Threonine Kinase, DMPK-related cell division control protein 42 binding kinase alpha

Probab=99.93  E-value=1.5e-25  Score=178.54  Aligned_cols=162  Identities=15%  Similarity=0.148  Sum_probs=124.9

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     .++..++|.+.+.   .....+.+.+|+.++..++|+||+++++++        .++...+++|||+.+
T Consensus        14 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~ey~~~   85 (332)
T cd05623          14 FGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDNQWITTLHYAF--------QDENNLYLVMDYYVG   85 (332)
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHHHHhhHHHHHHHHHHHHhhCCCCCEeeEEEEE--------ecCCEEEEEEeccCC
Confidence            677776     2223335544431   122334578899999999999999999875        456788999999999


Q ss_pred             ccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cc
Q psy7174          77 TTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HV  121 (188)
Q Consensus        77 ~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~  121 (188)
                      |+|..+.         ..++.++ .|++.||.|||+.+       |+|+       +||+|||++.            ..
T Consensus        86 g~L~~~l~~~~~~l~~~~~~~~~-~qi~~al~~lH~~~iiHrDlkp~Nili~~~~~~kL~DfG~a~~~~~~~~~~~~~~~  164 (332)
T cd05623          86 GDLLTLLSKFEDRLPEDMARFYL-AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV  164 (332)
T ss_pred             CcHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCHHHEEECCCCCEEEeecchheecccCCcceecccc
Confidence            9998763         2355666 79999999999988       5555       6999999743            35


Q ss_pred             ccccccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||..|  +|||++..    ...++.++|+||+||++|||++|+.||.+.+..+...++..
T Consensus       165 gt~~y--~aPE~~~~~~~~~~~~~~~~DvwSlGvil~ell~g~~Pf~~~~~~~~~~~i~~  222 (332)
T cd05623         165 GTPDY--ISPEILQAMEDGKGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  222 (332)
T ss_pred             cCccc--cCHHHHhccccCCCCCCCcCCEEeeHHHHHHHhcCCCCCCCCCHHHHHHHHhC
Confidence            78899  99999862    23478999999999999999999999998887777777754

Serine/Threonine Kinases (STKs), DMPK-like subfamily, DMPK-related cell division control protein 42 (Cdc42) binding kinase (MRCK) alpha isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The DMPK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MRCK is activated via interaction with the small GTPase Cdc42. MRCK/Cdc42 signaling mediates myosin-dependent cell motility. MRCKalpha is expressed ubiquitously in many tissues. It plays a role in the regulation of peripheral actin reorganization and neurite outgrowth. It may also play a role in the transferrin iron uptake pathw

>cd05106 PTKc_CSF-1R Catalytic domain of the Protein Tyrosine Kinase, Colony-Stimulating Factor-1 Receptor

Probab=99.93  E-value=4.4e-25  Score=178.69  Aligned_cols=133  Identities=20%  Similarity=0.277  Sum_probs=107.4

Q ss_pred             hhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------
Q psy7174          25 VNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------   84 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------   84 (188)
                      .+..+.+.+|+++++.+ +|+||++++++|        ..+...+++|||+.+|+|..+..                   
T Consensus        82 ~~~~~~~~~E~~il~~l~~h~nIv~~~~~~--------~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  153 (374)
T cd05106          82 TDEREALMSELKILSHLGQHKNIVNLLGAC--------THGGPVLVITEYCCYGDLLNFLRKKAETFLNFVMALPEISET  153 (374)
T ss_pred             HHHHHHHHHHHHHHHhhccCCceeeEeeEe--------cCCCCeEEeHhhccCCcHHHHHHhhhhhhccccccccccccc
Confidence            34456788999999999 799999999976        44567899999999999876531                   


Q ss_pred             -----------------------------------------------------------HHHHHHHHHHHHHHHHHhhcC
Q psy7174          85 -----------------------------------------------------------HLRYLENQQILEGLQALKSSM  105 (188)
Q Consensus        85 -----------------------------------------------------------~~~~~~~~qi~~gl~~lH~~~  105 (188)
                                                                                 .+..++ .|+++||.|||+++
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~aL~yLH~~g  232 (374)
T cd05106         154 SSDYKNITLEKKYIRSDSGFSSQGSDTYVEMRPVSSSSSQSSDSKDEEDTEDSWPLDLDDLLRFS-SQVAQGMDFLASKN  232 (374)
T ss_pred             cccccccchhcccccccccccccccccccccCCccccccccccccchhccCCCCCcCHHHHHHHH-HHHHHHHHHHHHCC
Confidence                                                                       234556 79999999999988


Q ss_pred             -------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh
Q psy7174         106 -------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL  158 (188)
Q Consensus       106 -------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~  158 (188)
                             |+|+       +||+|||++...             ++..|  +|||++.+.. ++.++||||+||++|+|++
T Consensus       233 iiHrDLkp~Nil~~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~DvwSlGvil~ellt  309 (374)
T cd05106         233 CIHRDVAARNVLLTDGRVAKICDFGLARDIMNDSNYVVKGNARLPVKW--MAPESIFDCV-YTVQSDVWSYGILLWEIFS  309 (374)
T ss_pred             EEeccCchheEEEeCCCeEEEeeceeeeeccCCcceeeccCCCCccce--eCHHHhcCCC-CCccccHHHHHHHHHHHHh
Confidence                   6666       599999986421             23458  9999997755 8999999999999999997


Q ss_pred             -CCCCCCCCChH
Q psy7174         159 -KAPFLPGESDL  169 (188)
Q Consensus       159 -g~~pf~~~~~~  169 (188)
                       |+.||.+....
T Consensus       310 ~G~~Pf~~~~~~  321 (374)
T cd05106         310 LGKSPYPGILVN  321 (374)
T ss_pred             CCCCCCcccccc
Confidence             99999775543

Protein Tyrosine Kinase (PTK) family; Colony-Stimulating Factor-1 Receptor (CSF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CSF-1R, also called c-Fms, is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of CSF-1R to its ligand, CSF-1, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. CSF-1R signaling is criti

>cd05093 PTKc_TrkB Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase B

Probab=99.93  E-value=1.3e-24  Score=169.64  Aligned_cols=143  Identities=18%  Similarity=0.257  Sum_probs=115.1

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------------
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------------   83 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------------   83 (188)
                      .....+.+.+|++++++++||||+++++++        ..+...++++||+.++++..+.                    
T Consensus        47 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~l~  118 (288)
T cd05093          47 SDNARKDFHREAELLTNLQHEHIVKFYGVC--------VEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNRPAELT  118 (288)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEE--------ecCCccEEEEEcCCCCCHHHHHHHcCCccccccccCCCCCCC
Confidence            444566789999999999999999999976        4467789999999999987653                    


Q ss_pred             -HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCcccc
Q psy7174          84 -SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLF  135 (188)
Q Consensus        84 -~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~  135 (188)
                       ..+..++ .|++.||+|||+++       |+|+       +|++|||++...             ++..|  +|||.+.
T Consensus       119 ~~~~~~~~-~ql~~aL~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~  195 (288)
T cd05093         119 QSQMLHIA-QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW--MPPESIM  195 (288)
T ss_pred             HHHHHHHH-HHHHHHHHHHHhCCeeecccCcceEEEccCCcEEeccCCccccccCCceeecCCCCCccccc--cCHHHhc
Confidence             2345566 79999999999998       6676       589999986421             24468  9999987


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         136 GARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       136 ~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +.. ++.++|+|||||++|+|++ |.+||.+.+..+....+.+.
T Consensus       196 ~~~-~~~~sDiwslG~il~~l~t~g~~p~~~~~~~~~~~~i~~~  238 (288)
T cd05093         196 YRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQG  238 (288)
T ss_pred             cCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            654 8999999999999999998 99999887766666555443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase B (TrkB); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkB is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkB to its ligands, brain-derived neurotrophic factor (BDNF) or neurotrophin 4 (NT4), results in receptor oligomerization and activation of the catalytic domain. TrkB is broadly

>cd05096 PTKc_DDR1 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 1

Probab=99.93  E-value=9.3e-25  Score=171.68  Aligned_cols=138  Identities=22%  Similarity=0.272  Sum_probs=110.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------------------
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------------------   84 (188)
                      ...+++.+|++++++++||||+++++++        .+....++++||+.++++..+..                     
T Consensus        61 ~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  132 (304)
T cd05096          61 NARNDFLKEVKILSRLKDPNIIRLLGVC--------VDEDPLCMITEYMENGDLNQFLSSHHLDDKEENGNDAVPPAHCL  132 (304)
T ss_pred             HHHHHHHHHHHHHhhcCCCCeeEEEEEE--------ecCCceEEEEecCCCCcHHHHHHhcccccccccccccccccccc
Confidence            3456789999999999999999999986        34567899999999999987532                     


Q ss_pred             ------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCC
Q psy7174          85 ------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAP  131 (188)
Q Consensus        85 ------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aP  131 (188)
                            .+..++ .|++.||.|||+.+       |+|+       +||+|||+++..             ++..|  +||
T Consensus       133 ~~~~~~~~~~i~-~~i~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~DfG~~~~~~~~~~~~~~~~~~~~~~y--~aP  209 (304)
T cd05096         133 PAISYSSLLHVA-LQIASGMKYLSSLNFVHRDLATRNCLVGENLTIKIADFGMSRNLYAGDYYRIQGRAVLPIRW--MAW  209 (304)
T ss_pred             ccccHHHHHHHH-HHHHHHHHHHHHCCccccCcchhheEEcCCccEEECCCccceecccCceeEecCcCCCCccc--cCH
Confidence                  234566 79999999999988       6666       599999986521             24568  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHH
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i  175 (188)
                      |++.... ++.++|+|||||++|+|++  +..||.+.+..+.+..+
T Consensus       210 E~~~~~~-~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~  254 (304)
T cd05096         210 ECILMGK-FTTASDVWAFGVTLWEILMLCKEQPYGELTDEQVIENA  254 (304)
T ss_pred             HHHhcCC-CCchhhhHHHHHHHHHHHHccCCCCCCcCCHHHHHHHH
Confidence            9987755 8999999999999999986  56788776655554433

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 1 (DDR1) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR1 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR1 binds to all collagens tested to date (types I-IV). It is widely expressed in many tissues. It is abundant in the brain and is also found in k

>KOG0690|consensus

Probab=99.93  E-value=5.5e-26  Score=174.82  Aligned_cols=161  Identities=16%  Similarity=0.123  Sum_probs=134.5

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||+|..     ++|+-++|.+++-   ..+...+.+.|-++|+..+||.+..+.-        +++..+.+|.||||..|
T Consensus       181 FGKVIL~rEKat~k~YAiKIlkKeviiakdEVAHTlTE~RVL~~~~HPFLt~LKY--------sFQt~drlCFVMeyanG  252 (516)
T KOG0690|consen  181 FGKVILCREKATGKLYAIKILKKEVIIAKDEVAHTLTENRVLQNCRHPFLTSLKY--------SFQTQDRLCFVMEYANG  252 (516)
T ss_pred             cceEEEEeecccCceeehhhhhhhheeehHHhhhhhhHHHHHHhccCcHHHHhhh--------hhccCceEEEEEEEccC
Confidence            778875     6677778888882   5566778889999999999999988865        34778899999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc-----------cccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI-----------GRHVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~-----------~~~~~~  123 (188)
                      |.|.-.        ++..+++- .+|+.||.|||+.+       .+|+       +||+|||+           +.++||
T Consensus       253 GeLf~HLsrer~FsE~RtRFYG-aEIvsAL~YLHs~~ivYRDlKLENLlLDkDGHIKitDFGLCKE~I~~g~t~kTFCGT  331 (516)
T KOG0690|consen  253 GELFFHLSRERVFSEDRTRFYG-AEIVSALGYLHSRNIVYRDLKLENLLLDKDGHIKITDFGLCKEEIKYGDTTKTFCGT  331 (516)
T ss_pred             ceEeeehhhhhcccchhhhhhh-HHHHHHhhhhhhCCeeeeechhhhheeccCCceEeeecccchhcccccceeccccCC
Confidence            997642        45677777 79999999999988       3333       59999997           348999


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.|  +|||++... .|+..+|+|.+|+++|||++|+.||...+....+..|..
T Consensus       332 PEY--LAPEVleDn-DYgraVDWWG~GVVMYEMmCGRLPFyn~dh~kLFeLIl~  382 (516)
T KOG0690|consen  332 PEY--LAPEVLEDN-DYGRAVDWWGVGVVMYEMMCGRLPFYNKDHEKLFELILM  382 (516)
T ss_pred             hhh--cCchhhccc-cccceeehhhhhHHHHHHHhccCcccccchhHHHHHHHh
Confidence            999  999999764 599999999999999999999999998888777777753

>cd07839 STKc_CDK5 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 5

Probab=99.93  E-value=4.3e-25  Score=171.65  Aligned_cols=149  Identities=34%  Similarity=0.558  Sum_probs=116.1

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~   99 (188)
                      ...+.+|++++++++||||+++++++        .+....++++||+.++.+..+        +..+..++ .|+++||.
T Consensus        43 ~~~~~~ei~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~al~  113 (284)
T cd07839          43 PSSALREICLLKELKHKNIVRLYDVL--------HSDKKLTLVFEYCDQDLKKYFDSCNGDIDPEIVKSFM-FQLLKGLA  113 (284)
T ss_pred             ccchhHHHHHHHhcCCCCeeeHHHHh--------ccCCceEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHH
Confidence            35678899999999999999999975        456678999999986443332        23456666 89999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      |||+.+       |+|+       +|++|||++..           .++..|  +|||.+.+...++.++|+||+||++|
T Consensus       114 ~LH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~DiwslG~il~  191 (284)
T cd07839         114 FCHSHNVLHRDLKPQNLLINKNGELKLADFGLARAFGIPVRCYSAEVVTLWY--RPPDVLFGAKLYSTSIDMWSAGCIFA  191 (284)
T ss_pred             HHHHCCEecCCCCHHHEEEcCCCcEEECccchhhccCCCCCCcCCCccccCC--cChHHHhCCcccCcHHHHHHHHHHHH
Confidence            999998       4444       69999997542           346778  99999876555789999999999999


Q ss_pred             HHHhCCCC-CCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         155 ELLLKAPF-LPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       155 el~~g~~p-f~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +|++|..| |.+.+....+..+.+.++.+....|
T Consensus       192 ~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd07839         192 ELANAGRPLFPGNDVDDQLKRIFRLLGTPTEESW  225 (284)
T ss_pred             HHHhcCCCCcCCCCHHHHHHHHHHHhCCCChHHh
Confidence            99998766 5666666777777777766665554

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 5 (CDK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK5 is unusual in that it is regulated by non-cyclin proteins, p35 and p39. It is highly expressed in the nervous system and is critical in normal neural development and function. It plays a role in neuronal migration and differentiation, and is also

>cd05062 PTKc_IGF-1R Catalytic domain of the Protein Tyrosine Kinase, Insulin-like Growth Factor-1 Receptor

Probab=99.93  E-value=1.6e-24  Score=168.00  Aligned_cols=140  Identities=14%  Similarity=0.262  Sum_probs=112.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH------------------HHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS------------------HLR   87 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~------------------~~~   87 (188)
                      ....++.+|+.+++.++||||+++++++        ..+...++++||+++++|..+..                  .+.
T Consensus        51 ~~~~~~~~e~~~l~~l~~~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (277)
T cd05062          51 RERIEFLNEASVMKEFNCHHVVRLLGVV--------SQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVQAPPSLKKMI  122 (277)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEEEE--------cCCCCeEEEEecCCCCCHHHHHHHcCccccccccccCCCHHHHH
Confidence            3455688999999999999999999975        44567899999999999987632                  234


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMY  140 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~  140 (188)
                      .++ .|++.||.|||+.+       |+|+       +|++|||++..             .++..|  +|||.+.+.. +
T Consensus       123 ~~~-~~l~~~l~~lH~~~~vH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~  198 (277)
T cd05062         123 QMA-GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW--MSPESLKDGV-F  198 (277)
T ss_pred             HHH-HHHHHHHHHHHHCCcccCCcchheEEEcCCCCEEECCCCCccccCCcceeecCCCCccCHhh--cChhHhhcCC-c
Confidence            455 79999999999988       6665       59999998642             224568  9999987755 8


Q ss_pred             CchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         141 GVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       141 ~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.++|+|||||++||+++ |..||.+.+..+....+..
T Consensus       199 ~~~~Di~slG~~l~el~~~~~~p~~~~~~~~~~~~~~~  236 (277)
T cd05062         199 TTYSDVWSFGVVLWEIATLAEQPYQGMSNEQVLRFVME  236 (277)
T ss_pred             CchhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHc
Confidence            999999999999999998 7899988777666555544

Protein Tyrosine Kinase (PTK) family; Insulin-like Growth Factor-1 Receptor (IGF-1R); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. IGF-1R is a receptor tyr kinases (RTK) that is composed of two alphabeta heterodimers. Binding of the ligand (IGF-1 or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, which stimulates downstream kinase activities and biological function. IGF-1R signaling is important in the differentiation, growth, and survival of normal cells. In cancer cells, wh

>cd05148 PTKc_Srm_Brk Catalytic domain of the Protein Tyrosine Kinases, Srm and Brk

Probab=99.93  E-value=1.1e-24  Score=167.32  Aligned_cols=168  Identities=17%  Similarity=0.248  Sum_probs=128.0

Q ss_pred             cccccc----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||.    .++..++|.++.......+.+.+|+++++.++||||+++++++        .+....++++||++++++.
T Consensus        19 ~~~vy~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   90 (261)
T cd05148          19 FGEVWEGLWKNRVRVAIKILKSDDLLKQQDFQKEVQALKRLRHKHLISLFAVC--------SVGEPVYIITELMEKGSLL   90 (261)
T ss_pred             CccEEEeEecCCCcEEEEeccccchhhHHHHHHHHHHHhcCCCcchhheeeeE--------ecCCCeEEEEeecccCCHH
Confidence            677776    2223335544444444567789999999999999999999975        3456789999999999998


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-----------cccc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-----------CTLY  125 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-----------~~~~  125 (188)
                      .+.          ..+..++ .|++.||.|||+.+       |+|+       +|++|||++...           ++..
T Consensus        91 ~~~~~~~~~~~~~~~~~~~~-~~i~~al~~lH~~~i~h~dl~~~nilv~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~  169 (261)
T cd05148          91 AFLRSPEGQVLPVASLIDMA-CQVAEGMAYLEEQNSIHRDLAARNILVGEDLVCKVADFGLARLIKEDVYLSSDKKIPYK  169 (261)
T ss_pred             HHHhcCCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccccCcceEEEcCCceEEEccccchhhcCCccccccCCCCceE
Confidence            752          3455566 79999999999988       5565       599999986422           2345


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      |  +|||.+.... ++.++|+||+|+++|++++ |+.||.+.+..+.+..+......|.+
T Consensus       170 ~--~~PE~~~~~~-~~~~~DiwslG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  226 (261)
T cd05148         170 W--TAPEAASHGT-FSTKSDVWSFGILLYEMFTYGQVPYPGMNNHEVYDQITAGYRMPCP  226 (261)
T ss_pred             e--cCHHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHhCCcCCCC
Confidence            8  8999987655 8899999999999999998 89999888777777666655444443

Protein Tyrosine Kinase (PTK) family; Src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites (Srm) and breast tumor kinase (Brk, also called protein tyrosine kinase 6); catalytic (c) domains. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Srm and Brk are a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases in general contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr; they are activated by autophosphorylation at the tyr kinase dom

>PTZ00024 cyclin-dependent protein kinase; Provisional

Probab=99.93  E-value=1.2e-24  Score=173.31  Aligned_cols=147  Identities=38%  Similarity=0.664  Sum_probs=120.9

Q ss_pred             HHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQAL  101 (188)
Q Consensus        30 ~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~l  101 (188)
                      .+.+|+++++.++||||+++++++        ..+...++++||+.+ ++..+        +..+..++ .|++.||.||
T Consensus        66 ~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~-~l~~~l~~~~~~~~~~~~~~~-~ql~~aL~~L  135 (335)
T PTZ00024         66 TTLRELKIMNEIKHENIMGLVDVY--------VEGDFINLVMDIMAS-DLKKVVDRKIRLTESQVKCIL-LQILNGLNVL  135 (335)
T ss_pred             hHHHHHHHHHhCCCcceeeeeEEE--------ecCCcEEEEEecccc-CHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHH
Confidence            477999999999999999999975        446688999999974 55543        33455666 8999999999


Q ss_pred             hhcC-------CCCe-------EEEecCCcccccc-------------------------cccccCCCCccccccCCCCc
Q psy7174         102 KSSM-------PALL-------KKFVGIGIGRHVC-------------------------TLYCTRGAPELLFGARMYGV  142 (188)
Q Consensus       102 H~~~-------~~~i-------lkl~dfg~~~~~~-------------------------~~~y~~~aPe~~~~~~~~~~  142 (188)
                      |+.+       +.|+       +|++|||++...+                         +..|  +|||.+.+...++.
T Consensus       136 H~~~i~H~dl~~~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~  213 (335)
T PTZ00024        136 HKWYFMHRDLSPANIFINSKGICKIADFGLARRYGYPPYSDTLSKDETMQRREEMTSKVVTLWY--RAPELLMGAEKYHF  213 (335)
T ss_pred             HhCCeecccccHHHeEECCCCCEEECCccceeecccccccccccccccccccccccccccccCC--CCChhcccCCCCCc
Confidence            9988       4444       6999999765332                         5578  99999876555789


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         143 GIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       143 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ++|+||+||++|++++|.+||.+.++.+.+..+....+.|.+..||
T Consensus       214 ~~Dv~slG~~l~el~tg~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  259 (335)
T PTZ00024        214 AVDMWSVGCIFAELLTGKPLFPGENEIDQLGRIFELLGTPNEDNWP  259 (335)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCchhhCc
Confidence            9999999999999999999999999999999998888888777665

>PLN00009 cyclin-dependent kinase A; Provisional

Probab=99.93  E-value=1.2e-24  Score=170.17  Aligned_cols=149  Identities=34%  Similarity=0.622  Sum_probs=118.3

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------HHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------YSHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~~~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|++++++++||||+++++++        .++...++++||+.++....+         ...+..++ .|++.||
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~-~qi~~aL  115 (294)
T PLN00009         45 PSTAIREISLLKEMQHGNIVRLQDVV--------HSEKRLYLVFEYLDLDLKKHMDSSPDFAKNPRLIKTYL-YQILRGI  115 (294)
T ss_pred             hHHHHHHHHHHHhccCCCEeeEEEEE--------ecCCeEEEEEecccccHHHHHHhCCCCCcCHHHHHHHH-HHHHHHH
Confidence            35678999999999999999999975        456789999999975433322         22344566 7999999


Q ss_pred             HHHhhcC-------CCCe--------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          99 QALKSSM-------PALL--------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        99 ~~lH~~~-------~~~i--------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      +|||+++       |+|+        +|++|||++..           .++..|  +|||.+.+...++.++|+||+||+
T Consensus       116 ~~LH~~~i~H~dl~p~nill~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~~~~~~~Dv~slG~i  193 (294)
T PLN00009        116 AYCHSHRVLHRDLKPQNLLIDRRTNALKLADFGLARAFGIPVRTFTHEVVTLWY--RAPEILLGSRHYSTPVDIWSVGCI  193 (294)
T ss_pred             HHHHhCCeeCCCCCcceEEEECCCCEEEEcccccccccCCCccccccCceeecc--cCHHHHhCCCCCCcHHHHHHHHHH
Confidence            9999988       5554        58999997642           335678  999998665457899999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +|++++|++||.+.++.+.+.++....+.|....|
T Consensus       194 ~~~l~tg~~pf~~~~~~~~~~~~~~~~~~~~~~~~  228 (294)
T PLN00009        194 FAEMVNQKPLFPGDSEIDELFKIFRILGTPNEETW  228 (294)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhc
Confidence            99999999999988888888888777776665544

>cd05586 STKc_Sck1_like Catalytic domain of Suppressor of loss of cAMP-dependent protein kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=6.9e-26  Score=180.20  Aligned_cols=161  Identities=14%  Similarity=0.170  Sum_probs=122.2

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC---CCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL---DYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l---~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .    ++..++|.+.+.   ......+..+|..++.++   +||||+++++++        .++...+++|||
T Consensus         6 ~g~Vy~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~~p~i~~~~~~~--------~~~~~~~lv~e~   77 (330)
T cd05586           6 FGQVYQVRKKDTRRIYAMKVLSKKEIVAKKEVAHTIGERNILVRTLLDESPFIVGLKFSF--------QTDSDLYLVTDY   77 (330)
T ss_pred             ceEEEEEEECCCCCEEEEEEEeHHHHhhhhHHHHHHHHHHHHHHhccCCCCcCcceEEEE--------ecCCeEEEEEcC
Confidence            788887 2    233445544332   112233455677777665   699999999875        446688999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------c
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------H  120 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~  120 (188)
                      +.++++...        +..+..++ .|+++||.|||+++       |+|+       +||+|||++.           .
T Consensus        78 ~~~g~L~~~l~~~~~~~~~~~~~~~-~qil~al~~LH~~~ivHrDlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~  156 (330)
T cd05586          78 MSGGELFWHLQKEGRFSEDRAKFYI-AELVLALEHLHKYDIVYRDLKPENILLDATGHIALCDFGLSKANLTDNKTTNTF  156 (330)
T ss_pred             CCCChHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeccCCHHHeEECCCCCEEEecCCcCcCCCCCCCCccCc
Confidence            999998764        34566677 89999999999998       5555       6999999754           3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      .||..|  +|||++.+...++.++||||+||++|+|++|+.||.+.+..+....+.
T Consensus       157 ~gt~~y--~aPE~~~~~~~~~~~~DvwslGvil~elltG~~Pf~~~~~~~~~~~i~  210 (330)
T cd05586         157 CGTTEY--LAPEVLLDEKGYTKHVDFWSLGVLVFEMCCGWSPFYAEDTQQMYRNIA  210 (330)
T ss_pred             cCCccc--cCHHHHcCCCCCCCccceeccccEEEEeccCCCCCCCCCHHHHHHHHH
Confidence            478889  999998765558999999999999999999999998887766665554

Serine/Threonine Kinases (STKs), Fission yeast Suppressor of loss of cAMP-dependent protein kinase (Sck1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sck1-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of fungal proteins with similarity to the Schizosaccharomyces pombe STK Sck1. Sck1 plays a role in trehalase activation triggered by glucose and a nitrogen source. Trehalase catalyzes the cleavage of the disaccharide trehalose to glucose. Trehalose, as a carbohydrate reserve and stress metabolite, plays an important role in the response of

>cd05632 STKc_GRK5 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 5

Probab=99.93  E-value=1.5e-24  Score=169.14  Aligned_cols=159  Identities=18%  Similarity=0.253  Sum_probs=120.1

Q ss_pred             cccccc-c----CCccccccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+..   ....+.+.+|++++++++|+||+++.+++        ..+...++++||+.+
T Consensus        13 ~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~il~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~   84 (285)
T cd05632          13 FGEVCACQVRATGKMYACKRLEKKRIKKRKGESMALNEKQILEKVNSQFVVNLAYAY--------ETKDALCLVLTIMNG   84 (285)
T ss_pred             CeEEEEEEECCCCcEEEEEEeehhhhhhhhHHHHHHHHHHHHHHcCCcCceeEEEEE--------ecCCEEEEEEEeccC
Confidence            677877 2    2333344443321   12234578899999999999999999875        446678999999999


Q ss_pred             ccHHHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccc
Q psy7174          77 TTKARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        77 ~~l~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~  122 (188)
                      +++....          ..+..++ .|++.||.|||+.+       |+|+       +|++|||++.          ..|
T Consensus        85 ~~L~~~~~~~~~~~~~~~~~~~~~-~ql~~~l~~lH~~~iiH~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~g  163 (285)
T cd05632          85 GDLKFHIYNMGNPGFEEERALFYA-AEILCGLEDLHRENTVYRDLKPENILLDDYGHIRISDLGLAVKIPEGESIRGRVG  163 (285)
T ss_pred             ccHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeecCCCHHHEEECCCCCEEEecCCcceecCCCCcccCCCC
Confidence            9987542          3455566 79999999999988       4443       6999999753          346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      +..|  +|||.+.+.. ++.++|+||+||++|++++|..||.+.++......+
T Consensus       164 ~~~~--~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~P~~~~~~~~~~~~~  213 (285)
T cd05632         164 TVGY--MAPEVLNNQR-YTLSPDYWGLGCLIYEMIEGQSPFRGRKEKVKREEV  213 (285)
T ss_pred             CcCc--cChHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            7789  9999997755 899999999999999999999999876654443333

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK5 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK5 is widely expressed in many tissues. It associates with

>PTZ00266 NIMA-related protein kinase; Provisional

Probab=99.93  E-value=7.3e-25  Score=191.75  Aligned_cols=161  Identities=23%  Similarity=0.314  Sum_probs=120.0

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .    ....++|.+...  .....+.+.+|+.++++++||||++++++|..      ......+++|||+.++
T Consensus        26 FGtVYLAkdk~tg~~vAlKvIk~~~l~e~~~~~~~~EI~IL~~L~HPNIVrl~d~f~d------e~~~~lyIVMEY~~gG   99 (1021)
T PTZ00266         26 FGEVFLVKHKRTQEFFCWKAISYRGLKEREKSQLVIEVNVMRELKHKNIVRYIDRFLN------KANQKLYILMEFCDAG   99 (1021)
T ss_pred             CeEEEEEEECCCCeEEEEEEEeccccCHHHHHHHHHHHHHHHHcCCCCcCeEEEEEEe------cCCCEEEEEEeCCCCC
Confidence            677886 2    223334444332  33445678899999999999999999998632      2345689999999999


Q ss_pred             cHHHHH------------HHHHHHHHHHHHHHHHHHhhc-------C-------CCCe----------------------
Q psy7174          78 TKARFY------------SHLRYLENQQILEGLQALKSS-------M-------PALL----------------------  109 (188)
Q Consensus        78 ~l~~~~------------~~~~~~~~~qi~~gl~~lH~~-------~-------~~~i----------------------  109 (188)
                      +|..+.            ..+..++ .||+.||.|||+.       +       |+||                      
T Consensus       100 SL~~lL~k~~~~~g~L~E~~Il~Ia-~QIL~ALaYLHs~g~~~~~k~IVHRDLKPeNILL~s~~~~lg~i~~~~~n~ng~  178 (1021)
T PTZ00266        100 DLSRNIQKCYKMFGKIEEHAIVDIT-RQLLHALAYCHNLKDGPNGERVLHRDLKPQNIFLSTGIRHIGKITAQANNLNGR  178 (1021)
T ss_pred             cHHHHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHhcccccccCCceeccCcHHHeEeecCccccccccccccccCCC
Confidence            997653            2345566 7999999999983       1       4443                      


Q ss_pred             --EEEecCCccc----------ccccccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         110 --KKFVGIGIGR----------HVCTLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       110 --lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                        +||+|||++.          ..||+.|  +|||++... ..++.++|||||||++|+|++|..||...+....+..
T Consensus       179 ~iVKLsDFGlAr~l~~~s~~~s~vGTp~Y--mAPEvL~ge~~~~s~KSDVWSLG~ILYELLTGk~PF~~~~~~~qli~  254 (1021)
T PTZ00266        179 PIAKIGDFGLSKNIGIESMAHSCVGTPYY--WSPELLLHETKSYDDKSDMWALGCIIYELCSGKTPFHKANNFSQLIS  254 (1021)
T ss_pred             CceEEccCCccccccccccccccCCCccc--cCHHHHhccCCCCCchhHHHHHHHHHHHHHHCCCCCCcCCcHHHHHH
Confidence              5899999754          3578899  999998642 3488999999999999999999999987665444433

>cd08529 STKc_FA2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii FA2 and similar domains

Probab=99.93  E-value=1.3e-24  Score=166.29  Aligned_cols=142  Identities=23%  Similarity=0.273  Sum_probs=115.7

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQI   94 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi   94 (188)
                      ....+.+.+|++++++++||||+++++++        .++...++++||++++++..+.          ..+..++ .|+
T Consensus        40 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~i~-~~l  110 (256)
T cd08529          40 RREREEAIDEARVLAKLDSSYIIRYYESF--------LDKGKLNIVMEYAENGDLHKLLKMQRGRPLPEDQVWRFF-IQI  110 (256)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCeehheeee--------ccCCEEEEEEEeCCCCcHHHHHHHhcCCCCCHHHHHHHH-HHH
Confidence            45567788999999999999999999975        4457889999999999998753          2344556 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      +.||.|||+.+       |+|+       +|++|||+..           ..++..|  +|||+..+.. ++.++|+|||
T Consensus       111 ~~al~~lH~~~i~h~dl~~~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  187 (256)
T cd08529         111 LLGLAHLHSKKILHRDIKSLNLFLDAYDNVKIGDLGVAKLLSDNTNFANTIVGTPYY--LSPELCEDKP-YNEKSDVWAL  187 (256)
T ss_pred             HHHHHHHHHCCcccCCCCcceEEEeCCCCEEEcccccceeccCccchhhccccCccc--cCHHHhcCCC-CCCccchHHH
Confidence            99999999988       6666       5999999744           2456789  9999998765 8899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |++++++++|+.||...+.......+.+.
T Consensus       188 G~il~~l~~g~~p~~~~~~~~~~~~~~~~  216 (256)
T cd08529         188 GVVLYECCTGKHPFDANNQGALILKIIRG  216 (256)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            99999999999999877765555555443

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii FA2-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii FA2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes FA2 and CNK4. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii FA2 was discovered in a genetic screen for deflagellation-defective mutants. It is essential for basal-body/centriole-associated microtubule severing, and plays a role in cell cyc

>KOG0587|consensus

Probab=99.93  E-value=1.5e-25  Score=189.42  Aligned_cols=172  Identities=17%  Similarity=0.244  Sum_probs=139.3

Q ss_pred             cccccc-cCCccc-cccccc--cchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMAR--CDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~--~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|+||+ .++... +.|+|.  .+.+..+++..|.++|+.+. |||++.++|+|....+   ..++.+|+|||||.+|+.
T Consensus        32 ygkv~k~k~~~~~~~aa~kI~~~~~d~deEiE~eynil~~~~~hpnv~~fyg~~~k~~~---~~~DqLWLVMEfC~gGSV  108 (953)
T KOG0587|consen   32 YGKVYKGRHVKTGQLAAIKIMDPTEDEEEEIELEYNMLKKYSHHPNVATFYGAFIKKDP---GNGDQLWLVMEFCGGGSV  108 (953)
T ss_pred             ceeEEEEeeeecCceeeeEeecCCccccHHHHHHHHHHHhccCCCCcceEEEEEEEecC---CCCCeEEEEeeccCCccH
Confidence            688888 566555 555554  35666778888999999875 9999999999866433   678899999999999999


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          80 ARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        80 ~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      .++          +..+.+++ +.++.||.+||++.       .+||       ||++|||.+.           .+||+
T Consensus       109 TDLVKn~~g~rl~E~~IaYI~-re~lrgl~HLH~nkviHRDikG~NiLLT~e~~VKLvDFGvSaQldsT~grRnT~iGtP  187 (953)
T KOG0587|consen  109 TDLVKNTKGNRLKEEWIAYIL-REILRGLAHLHNNKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDSTVGRRNTFIGTP  187 (953)
T ss_pred             HHHHhhhcccchhhHHHHHHH-HHHHHHHHHHhhcceeeecccCceEEEeccCcEEEeeeeeeeeeecccccccCcCCCc
Confidence            886          45688888 99999999999987       4455       6999999753           67899


Q ss_pred             cccCCCCccccccC----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         125 YCTRGAPELLFGAR----MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       125 ~y~~~aPe~~~~~~----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .+  ||||++.+.+    .|+..+|+||||++..||.-|.||+..+.+...+   +...+.|+|.
T Consensus       188 ~W--MAPEViac~e~~d~tyd~R~D~WsLGITaIEladG~PPl~DmHPmraL---F~IpRNPPPk  247 (953)
T KOG0587|consen  188 YW--MAPEVIACDESPDATYDYRSDLWSLGITAIEMAEGAPPLCDMHPMRAL---FLIPRNPPPK  247 (953)
T ss_pred             cc--ccceeeecccCCCCCcccccchhhccceeehhcCCCCCccCcchhhhh---ccCCCCCCcc
Confidence            99  9999997643    4778999999999999999999999988886665   4446777764

>KOG1187|consensus

Probab=99.93  E-value=1.6e-25  Score=179.82  Aligned_cols=147  Identities=15%  Similarity=0.167  Sum_probs=113.9

Q ss_pred             cccccc---cCCccccccccccch--hh-hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCC-ccEEEEeccccc
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCDV--NV-ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTS-SDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~~--~~-~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~-~~~iv~e~~~~~   77 (188)
                      ||.||+   .+.  ..+|+|+...  .. ..+|.+|++++.+++|||+|+++|||.+        +. ..++|+||++.|
T Consensus        88 fg~VYkG~l~~~--~~vAVK~~~~~~~~~~~eF~~Ei~~ls~l~H~Nlv~LlGyC~e--------~~~~~~LVYEym~nG  157 (361)
T KOG1187|consen   88 FGTVYKGVLSDG--TVVAVKRLSSNSGQGEREFLNEVEILSRLRHPNLVKLLGYCLE--------GGEHRLLVYEYMPNG  157 (361)
T ss_pred             CeEEEEEEECCC--CEEEEEEecCCCCcchhHHHHHHHHHhcCCCcCcccEEEEEec--------CCceEEEEEEccCCC
Confidence            788887   221  3444444211  11 4569999999999999999999999843        44 589999999999


Q ss_pred             cHHHHH---------H-HHHHHHHHHHHHHHHHHhhcC----------CCCe-------EEEecCCccc---c-------
Q psy7174          78 TKARFY---------S-HLRYLENQQILEGLQALKSSM----------PALL-------KKFVGIGIGR---H-------  120 (188)
Q Consensus        78 ~l~~~~---------~-~~~~~~~~qi~~gl~~lH~~~----------~~~i-------lkl~dfg~~~---~-------  120 (188)
                      +|.+..         . ....++ .+++.||+|||...          ++||       .||+|||++.   .       
T Consensus       158 sL~d~L~~~~~~~L~W~~R~kIa-~g~A~gL~yLH~~~~~~iiHrDiKssNILLD~~~~aKlsDFGLa~~~~~~~~~~~~  236 (361)
T KOG1187|consen  158 SLEDHLHGKKGEPLDWETRLKIA-LGAARGLAYLHEGCPPPIIHRDIKSSNILLDEDFNAKLSDFGLAKLGPEGDTSVST  236 (361)
T ss_pred             CHHHHhCCCCCCCCCHHHHHHHH-HHHHHHHHHHccCCCCCEecCCCCHHHeeECCCCCEEccCccCcccCCccccceee
Confidence            998751         1 233344 69999999999965          4455       3999999854   1       


Q ss_pred             --cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         121 --VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       121 --~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                        .||..|  +|||...... .+.++||||||+++.|+++|+.+...
T Consensus       237 ~~~gt~gY--~~PEy~~~g~-lt~KsDVySFGVvllElitgr~~~d~  280 (361)
T KOG1187|consen  237 TVMGTFGY--LAPEYASTGK-LTEKSDVYSFGVVLLELITGRKAVDQ  280 (361)
T ss_pred             ecCCCCcc--CChhhhccCC-cCcccccccchHHHHHHHhCCcccCC
Confidence              678889  9999997644 89999999999999999999987764

>cd05042 PTKc_Aatyk Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases

Probab=99.93  E-value=1.5e-24  Score=167.53  Aligned_cols=163  Identities=17%  Similarity=0.159  Sum_probs=120.5

Q ss_pred             ccccccc---C-Ccccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQQ---S-KWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~~---~-~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||..   + .....++++..    .......+.+|+++++.++||||+++++.+        ......+++|||+.+
T Consensus         8 fg~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~nii~~~~~~--------~~~~~~~lv~e~~~~   79 (269)
T cd05042           8 FGKVLLGEAHRGMSKARVVVKELRASATPDEQLLFLQEVQPYRELNHPNVLQCLGQC--------IESIPYLLVLEFCPL   79 (269)
T ss_pred             CceEEEEEEecCCCCeEEEEeecCccCChHHHHHHHHHHHHHHhCCCCCcceEEEEE--------CCCCceEEEEEeCCC
Confidence            7888861   1 12224445542    223345678999999999999999999975        445678999999999


Q ss_pred             ccHHHHH-------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc---------
Q psy7174          77 TTKARFY-------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH---------  120 (188)
Q Consensus        77 ~~l~~~~-------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~---------  120 (188)
                      |+|..+.             ..+..++ .|++.||+|||+.+       |.|+       +|++|||++..         
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~  158 (269)
T cd05042          80 GDLKNYLRSNRGMVAQMAQKDVLQRMA-CEVASGLLWLHQADFIHSDLALRNCQLTADLSVKIGDYGLALEQYPEDYYIT  158 (269)
T ss_pred             CcHHHHHHhccccccccccHHHHHHHH-HHHHHHHHHHHhcCEecccccHhheEecCCCcEEEeccccccccccchheec
Confidence            9998753             1234455 79999999999998       5565       59999998642         


Q ss_pred             ----cccccccCCCCccccc------cCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         121 ----VCTLYCTRGAPELLFG------ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       121 ----~~~~~y~~~aPe~~~~------~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                          .++..|  +|||++..      ...++.++|+||+||++||+++ |.+||....+.+.+..+...
T Consensus       159 ~~~~~~~~~y--~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~~~  225 (269)
T cd05042         159 KDCHAVPLRW--LAPELVEIRGQDLLPKDQTKKSNIWSLGVTMWELFTAADQPYPDLSDEQVLKQVVRE  225 (269)
T ss_pred             cCCCCCcccc--cCHHHHhhccccccccccchhhHHHHHHHHHHHHHhCCCCCCCcCCHHHHHHHHhhc
Confidence                224458  99998742      1236789999999999999998 78899887776666655443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase (Aatyk) subfamily; catalytic (c) domain. The Aatyk subfamily is also referred to as the lemur tyrosine kinase (Lmtk) subfamily. It consists of Aatyk1 (Lmtk1), Aatyk2 (Lmtk2, Brek), Aatyk3 (Lmtk3), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk proteins are mostly receptor tyr kinases (RTKs) containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 does not contain a transmembrane segment and is a cytoplasmic (or nonreceptor) kinase. Aatyk proteins are classified as tyr kina

>cd06619 PKc_MKK5 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 5

Probab=99.93  E-value=7.2e-25  Score=170.35  Aligned_cols=149  Identities=20%  Similarity=0.225  Sum_probs=116.8

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+.+. ..+..+++.+|++++++++||||+++++.|        ..+...++++||+.+++
T Consensus        14 ~~~v~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~   85 (279)
T cd06619          14 GGTVYKAYHLLTRRILAVKVIPLDITVELQKQIMSELEILYKCDSPYIIGFYGAF--------FVENRISICTEFMDGGS   85 (279)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCCChHHHHHHHHHHHHHHhCCCCCeeeEEEEE--------EECCEEEEEEecCCCCC
Confidence            577776 2    222334433332 334456788999999999999999999976        34567899999999999


Q ss_pred             HHHH----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------ccccccccCCCC
Q psy7174          79 KARF----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAP  131 (188)
Q Consensus        79 l~~~----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aP  131 (188)
                      +..+    +..+..++ .|++.||.|||+.+       |+|+       +|++|||++.         ..++..|  +||
T Consensus        86 l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y--~aP  162 (279)
T cd06619          86 LDVYRKIPEHVLGRIA-VAVVKGLTYLWSLKILHRDVKPSNMLVNTRGQVKLCDFGVSTQLVNSIAKTYVGTNAY--MAP  162 (279)
T ss_pred             hHHhhcCCHHHHHHHH-HHHHHHHHHHHHCCEeeCCCCHHHEEECCCCCEEEeeCCcceecccccccCCCCChhh--cCc
Confidence            8764    34556677 89999999999998       4454       6999999754         3567789  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      |.+.+.. ++.++|+||+||++|++++|+.||..
T Consensus       163 E~~~~~~-~~~~~DvwslG~~l~~l~~g~~pf~~  195 (279)
T cd06619         163 ERISGEQ-YGIHSDVWSLGISFMELALGRFPYPQ  195 (279)
T ss_pred             eeecCCC-CCCcchHHHHHHHHHHHHhCCCCchh
Confidence            9998755 89999999999999999999999954

Protein kinases (PKs), MAP kinase kinase 5 (MKK5) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK5, also referred to as MEK5, is a dual-specificity PK that p

>cd05108 PTKc_EGFR Catalytic domain of the Protein Tyrosine Kinase, Epidermal Growth Factor Receptor

Probab=99.93  E-value=1.5e-24  Score=171.48  Aligned_cols=145  Identities=15%  Similarity=0.187  Sum_probs=112.3

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      ....+++.+|+.+++.++||||++++++|.         ....++++||+.+|++..+.         ..+..++ .|++
T Consensus        50 ~~~~~~~~~e~~~l~~l~h~niv~~~g~~~---------~~~~~~v~e~~~~g~l~~~l~~~~~~~~~~~~~~~~-~qi~  119 (316)
T cd05108          50 PKANKEILDEAYVMASVDNPHVCRLLGICL---------TSTVQLITQLMPFGCLLDYVREHKDNIGSQYLLNWC-VQIA  119 (316)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEc---------CCCceeeeecCCCCCHHHHHHhccccCCHHHHHHHH-HHHH
Confidence            345677889999999999999999999862         23568999999999987752         2344455 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      .||+|||+.+       |+|+       +||+|||++...             ++..|  +|||.+.+.. ++.++|+||
T Consensus       120 ~~L~~LH~~~iiH~dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~~~y--~apE~~~~~~-~~~~~Di~s  196 (316)
T cd05108         120 KGMNYLEERRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGADEKEYHAEGGKVPIKW--MALESILHRI-YTHQSDVWS  196 (316)
T ss_pred             HHHHHHHhcCeeccccchhheEecCCCcEEEccccccccccCCCcceeccCCccceee--cChHHhccCC-CCchhhhHH
Confidence            9999999988       6666       599999986522             13458  9999997755 899999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         149 VGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       149 lG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      |||++||+++ |..||.+.+..+....+......|
T Consensus       197 lGv~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~  231 (316)
T cd05108         197 YGVTVWELMTFGSKPYDGIPASEISSILEKGERLP  231 (316)
T ss_pred             HHHHHHHHHcCCCCCCCCCCHHHHHHHHhCCCCCC
Confidence            9999999997 999998776655443333333333

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EGFR (HER1, ErbB1) is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphor

>cd06611 STKc_SLK_like Catalytic domain of Ste20-like kinase-like Protein Serine/Threonine Kinases

Probab=99.93  E-value=1.3e-24  Score=168.63  Aligned_cols=162  Identities=19%  Similarity=0.242  Sum_probs=122.8

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|.||. ..    +..++|.++.......+.+.+|++++++++||||+++++.+        ..+...++++||+.++++
T Consensus        18 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L   89 (280)
T cd06611          18 FGKVYKAQHKETGLFAAAKIIQIESEEELEDFMVEIDILSECKHPNIVGLYEAY--------FYENKLWILIEFCDGGAL   89 (280)
T ss_pred             CceEEEEEEcCCCcEEEEEEEeeCCHHHHHHHHHHHHHHHhCCCCceeEEEEEE--------ecCCeEEEEeeccCCCcH
Confidence            677777 22    22224433333445556788999999999999999999975        446678999999999999


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          80 ARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        80 ~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      ..+.         ..+..++ .|++.||.|||+.+       |+|+       ++++|||++.           ..++..
T Consensus        90 ~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lh~~~i~h~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  168 (280)
T cd06611          90 DSIMLELERGLTEPQIRYVC-RQMLEALNFLHSHKVIHRDLKAGNILLTLDGDVKLADFGVSAKNKSTLQKRDTFIGTPY  168 (280)
T ss_pred             HHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCChhhEEECCCCCEEEccCccchhhcccccccceeecchh
Confidence            8752         3456666 89999999999988       5554       6999999743           246778


Q ss_pred             ccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         126 CTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       126 y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |  +|||.+..    ...++.++|+||+|+++|++++|++||.+.+.......+..
T Consensus       169 y--~~PE~~~~~~~~~~~~~~~sDi~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  222 (280)
T cd06611         169 W--MAPEVVACETFKDNPYDYKADIWSLGITLIELAQMEPPHHELNPMRVLLKILK  222 (280)
T ss_pred             h--cCHHHHhhcccCCCCCCccccHHHHHHHHHHHHhCCCCcccCCHHHHHHHHhc
Confidence            9  99999752    12367899999999999999999999988776655555543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of the subfamily include SLK, STK10 (also called LOK for lymphocyte-oriented kinase), SmSLK (Schistosoma mansoni SLK), and related proteins. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It also plays a role in mediating actin reorganization. STK10 is responsible in regulating the CD28 responsive element in T cells, as well as leukocyte function associated anti

>cd07860 STKc_CDK2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase 2 and 3

Probab=99.93  E-value=1.1e-24  Score=169.30  Aligned_cols=148  Identities=34%  Similarity=0.653  Sum_probs=118.2

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQILEG   97 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~qi~~g   97 (188)
                      .+.+.+|++++++++||||+++++++        .++...++++||+.+ ++..+          ...+..++ .|++.|
T Consensus        43 ~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~-~l~~~~~~~~~~~l~~~~~~~~~-~~i~~~  112 (284)
T cd07860          43 PSTAIREISLLKELNHPNIVKLLDVI--------HTENKLYLVFEFLHQ-DLKKFMDASPLSGIPLPLIKSYL-FQLLQG  112 (284)
T ss_pred             chHHHHHHHHHHhcCCCCCcchhhhc--------ccCCcEEEEeecccc-CHHHHHHhCCCCCCCHHHHHHHH-HHHHHH
Confidence            35688999999999999999999975        456788999999964 55443          23455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      |+|||+.+       |+|+       +|++|||++..           .++..|  +|||.+.+...++.++|+||||++
T Consensus       113 l~~lh~~~i~H~~l~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slG~i  190 (284)
T cd07860         113 LAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWY--RAPEILLGCKYYSTAVDIWSLGCI  190 (284)
T ss_pred             HHHHHHCCeecCCCCHHHEEECCCCCEEEeeccchhhcccCccccccccccccc--cCCeEEecCCCCCcHHHHHHHHHH
Confidence            99999988       4444       69999997542           235678  999988765546889999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +|++++|+.||.+.+....+.++.+..+.|....|
T Consensus       191 l~~l~tg~~p~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd07860         191 FAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVW  225 (284)
T ss_pred             HHHHHHCCCCCCCCCHHHHHHHHHHHhCCCChhhh
Confidence            99999999999998888888888777777665544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 2 (CDK2) and CDK3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK2/3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK2 is regulated by cyclin E or cyclin A. Upon activation by cyclin E, it phosphorylates the retinoblastoma (pRb) protein which activates E2F mediated transcription and allows cells to move into S phase. The CDK2/cyclin A complex

>cd05094 PTKc_TrkC Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase C

Probab=99.93  E-value=2.2e-24  Score=168.62  Aligned_cols=142  Identities=17%  Similarity=0.241  Sum_probs=113.9

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------------
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------------   83 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------------   83 (188)
                      .....+.+.+|++++++++||||+++++++        .++...++++||++++++..+.                    
T Consensus        47 ~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~  118 (291)
T cd05094          47 TLAARKDFQREAELLTNLQHEHIVKFYGVC--------GDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKG  118 (291)
T ss_pred             cHHHHHHHHHHHHHHhcCCCCCcceEEEEE--------ccCCceEEEEecCCCCcHHHHHHhcCcccccccccccccCcC
Confidence            344456789999999999999999999975        4456789999999999998763                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCc
Q psy7174          84 ----SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPE  132 (188)
Q Consensus        84 ----~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe  132 (188)
                          ..+..++ .|++.||.|||+++       |.|+       +|++|||++..             .++..|  +|||
T Consensus       119 ~~~~~~~~~i~-~~i~~al~~lH~~~i~H~dlkp~Nil~~~~~~~~l~dfg~a~~~~~~~~~~~~~~~~~~~~y--~aPE  195 (291)
T cd05094         119 ELGLSQMLHIA-SQIASGMVYLASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYSTDYYRVGGHTMLPIRW--MPPE  195 (291)
T ss_pred             CCCHHHHHHHH-HHHHHHHHHHHhCCeeecccCcceEEEccCCcEEECCCCcccccCCCceeecCCCCCcceee--cChH
Confidence                2345566 79999999999998       6666       59999998542             234568  9999


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         133 LLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       133 ~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      .+.+.. ++.++|+||+||++|+|++ |++||...+..+....+..
T Consensus       196 ~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  240 (291)
T cd05094         196 SIMYRK-FTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIECITQ  240 (291)
T ss_pred             HhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhC
Confidence            987755 8999999999999999998 9999977766555555443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase C (TrkC); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkC is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkC to its ligand, neurotrophin 3 (NT3), results in receptor oligomerization and activation of the catalytic domain. TrkC is broadly expressed in the nervous system and in some n

>KOG1989|consensus

Probab=99.93  E-value=7.6e-25  Score=185.21  Aligned_cols=178  Identities=19%  Similarity=0.274  Sum_probs=132.4

Q ss_pred             cccccc-c-CCcccccccccc---chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCC-CCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q-SKWSPNTPMARC---DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLS-TSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~-~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~-~~~~~iv~e~~~~~   77 (188)
                      |+-||. + .+...-.|+||.   +....+.+.+||++|++|+ |+|||.|++...  ....... ..+.+++||||.+|
T Consensus        50 Fa~VYla~~~~~~~~~AlKrm~~~de~~L~~v~~EI~~MK~L~gh~nIV~yidss~--~~~~~~~~~~EvllLmEyC~gg  127 (738)
T KOG1989|consen   50 FAQVYLAQDVKGGKKYALKRMYVNDEEALNAVKREIDIMKLLSGHKNIVSYIDSSA--INRSSNNGVWEVLLLMEYCKGG  127 (738)
T ss_pred             cEEEEEEEecCCCceeeeeeeecCCHHHHHHHHHHHHHHHHhcCCCceeeEecccc--ccccCCCceeEEEeehhhccCC
Confidence            555665 2 222244556663   4455567889999999998 999999999421  2222333 35678999999987


Q ss_pred             cHHHH----------HHHHHHHHHHHHHHHHHHHhhcCC---------CCe-------EEEecCCccc------------
Q psy7174          78 TKARF----------YSHLRYLENQQILEGLQALKSSMP---------ALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        78 ~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~~---------~~i-------lkl~dfg~~~------------  119 (188)
                      .|-++          +.++..++ .|+++|+.+||...|         +|+       .||||||.+.            
T Consensus       128 ~Lvd~mn~Rlq~~lte~eVLkIf-~dv~~AVa~mH~~~pPiIHRDLKiENvLls~~g~~KLCDFGSatt~~~~~~~~~e~  206 (738)
T KOG1989|consen  128 SLVDFMNTRLQTRLTEDEVLKIF-YDVCEAVAAMHYLKPPIIHRDLKIENVLLSADGNYKLCDFGSATTKILSPTSAQEV  206 (738)
T ss_pred             cHHHHHHHHHhccCChHHHHHHH-HHHHHHHHHHhcCCCccchhhhhhhheEEcCCCCEEeCcccccccccCCCccHHHH
Confidence            77665          45677788 899999999999882         344       3999999743            


Q ss_pred             --------ccccccccCCCCcccc---ccCCCCchhHHHHHHHHHHHHHhCCCCCCCC----------------ChHHHH
Q psy7174         120 --------HVCTLYCTRGAPELLF---GARMYGVGIDMWAVGCIICELLLKAPFLPGE----------------SDLDQL  172 (188)
Q Consensus       120 --------~~~~~~y~~~aPe~~~---~~~~~~~~~DiwslG~il~el~~g~~pf~~~----------------~~~~~~  172 (188)
                              ...|+.|  +|||++.   +.+ .+.|+|||+|||+||-++....||.+.                +-.+.+
T Consensus       207 ~~ve~eI~k~TTp~Y--RsPEMIDlysg~p-I~eKsDIWALGclLYkLCy~t~PFe~sg~laIlng~Y~~P~~p~ys~~l  283 (738)
T KOG1989|consen  207 NYVEEEIEKYTTPQY--RSPEMIDLYSGLP-IGEKSDIWALGCLLYKLCYFTTPFEESGKLAILNGNYSFPPFPNYSDRL  283 (738)
T ss_pred             HHHHHHHHhhCCccc--cChHHHhhhcCCC-CcchhHHHHHHHHHHHHHHhCCCcCcCcceeEEeccccCCCCccHHHHH
Confidence                    2357899  9999984   434 789999999999999999999999644                346667


Q ss_pred             HHHHhhcCCCCCCCCC
Q psy7174         173 TRIFQTLGTPSEDTWP  188 (188)
Q Consensus       173 ~~i~~~~~~p~~~~~p  188 (188)
                      ..+++.+..|.|+.+|
T Consensus       284 ~~LI~~mL~~nP~~RP  299 (738)
T KOG1989|consen  284 KDLIRTMLQPNPDERP  299 (738)
T ss_pred             HHHHHHHhccCcccCC
Confidence            7777877788888776

>cd05104 PTKc_Kit Catalytic domain of the Protein Tyrosine Kinase, Kit

Probab=99.93  E-value=1.2e-24  Score=176.11  Aligned_cols=152  Identities=18%  Similarity=0.230  Sum_probs=115.1

Q ss_pred             ccccccc----------CCcccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQQ----------SKWSPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~~----------~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+.          .+..++|.++.. .....+.+.+|+++++.+ +||||++++++|        ..+...+++||
T Consensus        48 fG~V~~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~Ei~il~~l~~HpnIv~l~~~~--------~~~~~~~lv~E  119 (375)
T cd05104          48 FGKVVEATAYGLFKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHINIVNLLGAC--------TVGGPTLVITE  119 (375)
T ss_pred             cceEEEEEEeccccCccceeEEEEeccCCcCcHHHHHHHHHHHHHHHhcCCcceeeeeeee--------ccCCcceeeeh
Confidence            6788761          112334444432 234456788999999999 799999999976        45667899999


Q ss_pred             ccccccHHHHHH--------------------------------------------------------------------
Q psy7174          73 IFTKTTKARFYS--------------------------------------------------------------------   84 (188)
Q Consensus        73 ~~~~~~l~~~~~--------------------------------------------------------------------   84 (188)
                      |+++|+|..+..                                                                    
T Consensus       120 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (375)
T cd05104         120 YCCYGDLLNFLRRKRDSFICPKHEDHAEAALYKNLLHQREMSCDSLNEYMDMKPGVSYVVPTKADKRRSVRSGSYIDQDV  199 (375)
T ss_pred             hccCCcHHHHHHhcccccccccccchhhhHHHHhhhhhhcccchhhhhhhhcCCCcccccccccccccccccceeccccc
Confidence            999999876532                                                                    


Q ss_pred             ---------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------c
Q psy7174          85 ---------------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------C  122 (188)
Q Consensus        85 ---------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~  122 (188)
                                     .+..++ .|++.||.|||+.+       |+|+       +|++|||++...             +
T Consensus       200 ~~~~~~~~~~~l~~~~~~~~~-~qi~~~l~~lH~~~ivH~Dlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~  278 (375)
T cd05104         200 TSEILEEDELALDTEDLLSFS-YQVAKGMSFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIRNDSNYVVKGNARL  278 (375)
T ss_pred             HHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCchhhEEEECCCcEEEecCccceeccCcccccccCCCCC
Confidence                           123345 69999999999988       6666       599999986421             2


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESD  168 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~  168 (188)
                      +..|  +|||++.+.. ++.++|+|||||++|||++ |.+||.+...
T Consensus       279 ~~~y--~aPE~~~~~~-~~~~sDi~slG~~l~ellt~g~~p~~~~~~  322 (375)
T cd05104         279 PVKW--MAPESIFNCV-YTFESDVWSYGILLWEIFSLGSSPYPGMPV  322 (375)
T ss_pred             Ccce--eChhHhcCCC-CCCCCCHHHHHHHHHHHHhcCCCCCCCCCc
Confidence            2358  9999998765 8999999999999999997 8999976543

Protein Tyrosine Kinase (PTK) family; Kit (or c-Kit); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Kit is a member of the Platelet Derived Growth Factor Receptor (PDGFR) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of Kit to its ligand, the stem-cell factor (SCF), leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. Kit is important in the development of melanocytes, germ cells, mast cells, hematopoietic stem ce

>cd05113 PTKc_Btk_Bmx Catalytic domain of the Protein Tyrosine Kinases, Bruton's tyrosine kinase and Bone marrow kinase on the X chromosome

Probab=99.93  E-value=2.4e-24  Score=165.42  Aligned_cols=163  Identities=17%  Similarity=0.223  Sum_probs=121.5

Q ss_pred             cccccc---cCCc-cccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ---QSKW-SPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~---~~~~-~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      +|.||.   .++. .++|.++... ...+.+.+|++++++++||||+++++++        .++...++++||+.++++.
T Consensus        17 ~~~vy~~~~~~~~~~aik~~~~~~-~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l~   87 (256)
T cd05113          17 FGVVKYGKWRGQYDVAIKMIKEGS-MSEDEFIEEAKVMMKLSHEKLVQLYGVC--------TKQRPIYIVTEYMSNGCLL   87 (256)
T ss_pred             cceEEEEEecCCCcEEEEEcCCCc-ccHHHHHHHHHHHhcCCCCCeeeEEEEE--------ccCCCcEEEEEcCCCCcHH
Confidence            566665   1222 2344444322 2245689999999999999999999986        3345689999999999887


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc------------cccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~  125 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |.|+       +|++|||.++..            ++..
T Consensus        88 ~~i~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05113          88 NYLREHGKRFQPSQLLEMC-KDVCEGMAYLESKQFIHRDLAARNCLVDDQGCVKVSDFGLSRYVLDDEYTSSVGSKFPVR  166 (256)
T ss_pred             HHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeccccCcceEEEcCCCCEEECCCccceecCCCceeecCCCccChh
Confidence            752         3455666 89999999999988       5555       699999975421            2346


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      |  +|||.+.+.. ++.++|+|||||++|+|++ |..||...+..+....+.+..+
T Consensus       167 y--~~pe~~~~~~-~~~~~Di~slG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~  219 (256)
T cd05113         167 W--SPPEVLLYSK-FSSKSDVWAFGVLMWEVYSLGKMPYERFNNSETVEKVSQGLR  219 (256)
T ss_pred             h--CCHHHHhcCc-ccchhHHHHHHHHHHHHhcCCCCCcCcCCHHHHHHHHhcCCC
Confidence            8  9999997755 8999999999999999998 9999987776665555555433

Protein Tyrosine Kinase (PTK) family; Bruton's tyrosine kinase (Btk) and Bone marrow kinase on the X chromosome (Bmx); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Btk and Bmx (also named Etk) are members of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds

>PRK13184 pknD serine/threonine-protein kinase; Reviewed

Probab=99.93  E-value=9.4e-25  Score=190.15  Aligned_cols=151  Identities=16%  Similarity=0.126  Sum_probs=118.5

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...   .....+++.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        15 fG~VYlA~d~~tg~~VAIK~I~~~l~~~e~~~~rflrEi~ILs~L~HPNIVkl~~v~--------~d~~~lyLVMEY~eG   86 (932)
T PRK13184         15 MGEVYLAYDPVCSRRVALKKIREDLSENPLLKKRFLREAKIAADLIHPGIVPVYSIC--------SDGDPVYYTMPYIEG   86 (932)
T ss_pred             CEEEEEEEECCCCcEEEEEEECcccccCHHHHHHHHHHHHHHHhCCCcCcCeEEEEE--------eeCCEEEEEEEcCCC
Confidence            688887 2    223334444332   123456789999999999999999999975        345678999999999


Q ss_pred             ccHHHHHH-------------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc---
Q psy7174          77 TTKARFYS-------------------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH---  120 (188)
Q Consensus        77 ~~l~~~~~-------------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~---  120 (188)
                      +++..+..                   .+..++ .|+++||+|||+.+       |+|+       +|++|||++..   
T Consensus        87 GSL~~lL~s~~~~~~l~e~~~~~lsv~~iL~I~-~QIa~AL~yLHs~GIIHRDLKPeNILLd~dg~vKLiDFGLAk~i~~  165 (932)
T PRK13184         87 YTLKSLLKSVWQKESLSKELAEKTSVGAFLSIF-HKICATIEYVHSKGVLHRDLKPDNILLGLFGEVVILDWGAAIFKKL  165 (932)
T ss_pred             CCHHHHHHHhhhccccchhhhcccCHHHHHHHH-HHHHHHHHHHHHCCccccCCchheEEEcCCCCEEEEecCcceeccc
Confidence            99987532                   123455 69999999999988       7777       48999997542   


Q ss_pred             --------------------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         121 --------------------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       121 --------------------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                                                .||+.|  +|||.+.+.. ++.++|+||+||++|||++|.+||.+..
T Consensus       166 ~~~~~~~l~~~~~~s~~s~~t~~g~~vGT~~Y--mAPE~l~g~~-~S~kSDIWSLGVILyELLTG~~PF~~~~  235 (932)
T PRK13184        166 EEEDLLDIDVDERNICYSSMTIPGKIVGTPDY--MAPERLLGVP-ASESTDIYALGVILYQMLTLSFPYRRKK  235 (932)
T ss_pred             ccccccccccccccccccccccCCCCCCCCCC--CCHHHhcCCC-CCcHhHHHHHHHHHHHHHHCCCCCCCcc
Confidence                                      478899  9999998765 8999999999999999999999997644

>cd05092 PTKc_TrkA Catalytic domain of the Protein Tyrosine Kinase, Tropomyosin Related Kinase A

Probab=99.93  E-value=2.2e-24  Score=167.66  Aligned_cols=150  Identities=15%  Similarity=0.228  Sum_probs=116.6

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------------
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------------   83 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------------   83 (188)
                      ++.++.......+.+.+|++++++++|+||+++++++        .+....++++||++++++..+.             
T Consensus        40 ~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~  111 (280)
T cd05092          40 VKALKEASESARQDFQREAELLTVLQHQHIVRFYGVC--------TEGRPLLMVFEYMRHGDLNRFLRSHGPDAKILAGG  111 (280)
T ss_pred             EEecCcCCHHHHHHHHHHHHHHhcCCCCCCceEEEEE--------ecCCceEEEEecCCCCCHHHHHHhcCcchhhhccc
Confidence            3444444455567899999999999999999999975        3456789999999999987652             


Q ss_pred             ----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccc
Q psy7174          84 ----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYC  126 (188)
Q Consensus        84 ----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y  126 (188)
                                ..+..++ .|++.|++|||+.+       |+|+       +|++|||++...             ++..|
T Consensus       112 ~~~~~~~l~~~~~~~~~-~qi~~al~~LH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y  190 (280)
T cd05092         112 EDVAPGQLTLGQMLAIA-SQIASGMVYLASLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTDYYRVGGRTMLPIRW  190 (280)
T ss_pred             ccCCccccCHHHHHHHH-HHHHHHHHHHHHCCeecccccHhhEEEcCCCCEEECCCCceeEcCCCceeecCCCccccccc
Confidence                      2344555 79999999999988       5665       599999986421             24568


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                        +|||.+.+.. ++.++|+|||||++|++++ |.+||......+....+...
T Consensus       191 --~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  240 (280)
T cd05092         191 --MPPESILYRK-FTTESDIWSFGVVLWEIFTYGKQPWYQLSNTEAIECITQG  240 (280)
T ss_pred             --cCHHHhccCC-cCchhhHHHHHHHHHHHHcCCCCCCccCCHHHHHHHHHcC
Confidence              9999987755 8999999999999999998 99999776665555555443

Protein Tyrosine Kinase (PTK) family; Tropomyosin Related Kinase A (TrkA); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. TrkA is a member of the Trk subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular region with arrays of leucine-rich motifs flanked by two cysteine-rich clusters followed by two immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. Binding of TrkA to its ligand, nerve growth factor (NGF), results in receptor oligomerization and activation of the catalytic domain. TrkA is expressed mainly in neural-crest-derived sensory

>cd05068 PTKc_Frk_like Catalytic domain of Fyn-related kinase-like Protein Tyrosine Kinases

Probab=99.93  E-value=2.6e-24  Score=165.48  Aligned_cols=168  Identities=17%  Similarity=0.253  Sum_probs=125.5

Q ss_pred             cccccc----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      +|.||+    .++..++|.++.. ....+++.+|++++++++||||+++++++        ..+...++++|+++++++.
T Consensus        19 ~~~v~~~~~~~~~~v~iK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   89 (261)
T cd05068          19 FGEVWEGLWNNTTPVAVKTLKPG-TMDPKDFLAEAQIMKKLRHPKLIQLYAVC--------TLEEPIYIVTELMKYGSLL   89 (261)
T ss_pred             CccEEEEEecCCeEEEEEeeCCC-cccHHHHHHHHHHHHHCCCCCccceeEEE--------ecCCCeeeeeecccCCcHH
Confidence            567776    1222234433322 22356788999999999999999999975        3456789999999999988


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccccc------------cc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVC------------TL  124 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~------------~~  124 (188)
                      .+.          ..+..++ .|++.||.+||+.+       |+|+       +|++|||++....            +.
T Consensus        90 ~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  168 (261)
T cd05068          90 EYLQGGAGRALKLPQLIDMA-AQVASGMAYLEAQNYIHRDLAARNVLVGENNICKVADFGLARVIKEDIYEAREGAKFPI  168 (261)
T ss_pred             HHHhccCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeccCCcceEEEcCCCCEEECCcceEEEccCCcccccCCCcCce
Confidence            753          2345566 79999999999988       6666       5999999865321            23


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .|  +|||.+.+.. ++.++|+||||++++++++ |+.||.+.+.......+.+....|.+.
T Consensus       169 ~y--~aPE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~  227 (261)
T cd05068         169 KW--TAPEAALYNR-FSIKSDVWSFGILLTEIVTYGRMPYPGMTNAEVLQQVDQGYRMPCPP  227 (261)
T ss_pred             ec--cCccccccCC-CCchhhHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCC
Confidence            58  9999987755 8999999999999999998 999998887777776665554444443

Protein Tyrosine Kinase (PTK) family; Human Fyn-related kinase (Frk) and similar proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Frk and Srk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins a

>KOG0199|consensus

Probab=99.92  E-value=2.7e-25  Score=184.50  Aligned_cols=171  Identities=18%  Similarity=0.153  Sum_probs=134.2

Q ss_pred             cccccc------cCCcc--ccccccccchh-hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ------QSKWS--PNTPMARCDVN-VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~------~~~~~--~~~~i~~~~~~-~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.|.+      +++.+  ++|.++..... ...+|++|+.+|.+|+|+|++++||+.         .+....+|+|+++
T Consensus       123 FgvV~rg~Wt~psgk~V~VAVKclr~d~l~~~mddflrEas~M~~L~H~hliRLyGvV---------l~qp~mMV~ELap  193 (1039)
T KOG0199|consen  123 FGVVKRGTWTQPSGKHVNVAVKCLRDDSLNAIMDDFLREASHMLKLQHPHLIRLYGVV---------LDQPAMMVFELAP  193 (1039)
T ss_pred             eeeEeeccccCCCCcEEeEEEEeccCCccchhHHHHHHHHHHHHhccCcceeEEeeee---------ccchhhHHhhhcc
Confidence            677776      23332  26655554333 667899999999999999999999984         3467899999999


Q ss_pred             cccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccccc---------
Q psy7174          76 KTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVC---------  122 (188)
Q Consensus        76 ~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~---------  122 (188)
                      .|+|.+-          ...+..++ .||+.||.||.+++       ..|+       +||+|||+.+..|         
T Consensus       194 lGSLldrLrka~~~~llv~~Lcdya-~QiA~aM~YLeskrlvHRDLAARNlllasprtVKI~DFGLmRaLg~ned~Yvm~  272 (1039)
T KOG0199|consen  194 LGSLLDRLRKAKKAILLVSRLCDYA-MQIAKAMQYLESKRLVHRDLAARNLLLASPRTVKICDFGLMRALGENEDMYVMA  272 (1039)
T ss_pred             cchHHHHHhhccccceeHHHHHHHH-HHHHHHHHHHhhhhhhhhhhhhhhheecccceeeeecccceeccCCCCcceEec
Confidence            9998663          23345555 69999999998877       2233       6999999976443         


Q ss_pred             -----cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         123 -----TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       123 -----~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                           ...+  .|||.+.... ++.++|+|++||++|||++ |+.||.|.+..+++++|...-+.|-|..||
T Consensus       273 p~rkvPfAW--CaPEsLrh~k-FShaSDvWmyGVTiWEMFtyGEePW~G~~g~qIL~~iD~~erLpRPk~cs  341 (1039)
T KOG0199|consen  273 PQRKVPFAW--CAPESLRHRK-FSHASDVWMYGVTIWEMFTYGEEPWVGCRGIQILKNIDAGERLPRPKYCS  341 (1039)
T ss_pred             CCCcCcccc--cCHhHhcccc-ccccchhhhhhhhHHhhhccCCCCCCCCCHHHHHHhccccccCCCCCCCh
Confidence                 1234  6999998866 9999999999999999996 899999999999999998877777777765

>cd05105 PTKc_PDGFR_alpha Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor alpha

Probab=99.92  E-value=1.8e-24  Score=176.49  Aligned_cols=131  Identities=21%  Similarity=0.274  Sum_probs=105.7

Q ss_pred             hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHH-------------------
Q psy7174          26 NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH-------------------   85 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~-------------------   85 (188)
                      ...+.+.+|++++++++ ||||++++++|        .+....+++|||+.+|+|..+...                   
T Consensus        82 ~~~~~~~~Ei~~l~~l~~HpnIv~l~~~~--------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~  153 (400)
T cd05105          82 SEKQALMSELKIMTHLGPHLNIVNLLGAC--------TKSGPIYIITEYCFYGDLVNYLHKNRDNFLSRHPEKPKKDLDI  153 (400)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeeEEEEE--------ccCCceEEEEEecCCCcHHHHHHHhhhhhhccccccccccccc
Confidence            34567899999999996 99999999986        445678999999999998765321                   


Q ss_pred             --------------------------------------------------------------------------------
Q psy7174          86 --------------------------------------------------------------------------------   85 (188)
Q Consensus        86 --------------------------------------------------------------------------------   85 (188)
                                                                                                      
T Consensus       154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~  233 (400)
T cd05105         154 FGINPADESTRSYVILSFENKGDYMDMKQADTTQYVPMLEIKEASKYSDIQRSNYDRPASYKGSNDSEVKNLLSDDGSEG  233 (400)
T ss_pred             cCCCcccccccchhhhhhcccccccccccccccccchhhhhhhhhhhhhcccCcccccccccCcchhhHHHHHHhcccCC
Confidence                                                                                            


Q ss_pred             -----HHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCcc
Q psy7174          86 -----LRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPEL  133 (188)
Q Consensus        86 -----~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~  133 (188)
                           +..++ .|+++||+|||+.+       |.|+       +|++|||++..             .++..|  +|||.
T Consensus       234 l~~~~~~~~~-~qi~~aL~~LH~~~ivH~dikp~Nill~~~~~~kL~DfGla~~~~~~~~~~~~~~~~~~~~y--~aPE~  310 (400)
T cd05105         234 LTTLDLLSFT-YQVARGMEFLASKNCVHRDLAARNVLLAQGKIVKICDFGLARDIMHDSNYVSKGSTFLPVKW--MAPES  310 (400)
T ss_pred             CCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCChHhEEEeCCCEEEEEeCCcceeccccccccccCCcCCCcce--EChhh
Confidence                 23355 69999999999988       5555       69999998542             234568  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCCh
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESD  168 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~  168 (188)
                      +.+.. ++.++|||||||++|+|++ |..||.+...
T Consensus       311 ~~~~~-~~~~~DiwSlGvil~ellt~g~~P~~~~~~  345 (400)
T cd05105         311 IFDNL-YTTLSDVWSYGILLWEIFSLGGTPYPGMIV  345 (400)
T ss_pred             hcCCC-CCchhhHHHHHHHHHHHHHCCCCCCcccch
Confidence            97755 8999999999999999997 8899876543

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) alpha; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR alpha is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR alpha forms homodimers or heterodimers with PDGFR beta, depending on the nature of the PDGF ligand. PDGF-AA, PDGF-

>cd07865 STKc_CDK9 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 9

Probab=99.92  E-value=2.9e-24  Score=168.73  Aligned_cols=157  Identities=29%  Similarity=0.513  Sum_probs=118.5

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      ..+.+|++++++++||||+++++++..............++++||+.+.....+        +..+..++ .|+++||.|
T Consensus        56 ~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~-~qi~~al~~  134 (310)
T cd07865          56 ITALREIKILQLLKHENVVNLIEICRTKATPYNRYKGSFYLVFEFCEHDLAGLLSNKNVKFTLSEIKKVM-KMLLNGLYY  134 (310)
T ss_pred             hHHHHHHHHHHhCCCCCccceEEEEecccccccCCCceEEEEEcCCCcCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHH
Confidence            356789999999999999999998643222112233456999999976433322        34556677 799999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCcccc---------------cccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGRH---------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~~---------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      ||+++       |+|+       +|++|||++..               .++..|  +|||.+.+...++.++|+||+|+
T Consensus       135 lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~  212 (310)
T cd07865         135 IHRNKILHRDMKAANILITKDGILKLADFGLARAFSLSKNSKPNRYTNRVVTLWY--RPPELLLGERDYGPPIDMWGAGC  212 (310)
T ss_pred             HHHCCeeccCCCHHHEEECCCCcEEECcCCCcccccCCcccCCCCccCcccCccc--cCcHHhcCCcccCchhhhHHHHH
Confidence            99998       4444       69999997541               245678  99999876555788999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         152 IICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       152 il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ++|++++|.+||.+.+.......+.+..+.++++.||
T Consensus       213 ~l~el~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (310)
T cd07865         213 IMAEMWTRSPIMQGNTEQHQLTLISQLCGSITPEVWP  249 (310)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence            9999999999999988887777777777665555443

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK9 together with a cyclin partner (cyclin T1, T2a, T2b, or K) is the main component of distinct positive transcription elongation factors (P-TEFb), which function as Ser2 C-terminal domain kinases of RNA polymerase II. P-TEFb participates in multipl

>cd05091 PTKc_Ror2 Catalytic domain of the Protein Tyrosine Kinase, Receptor tyrosine kinase-like Orphan Receptor 2

Probab=99.92  E-value=2.4e-24  Score=167.47  Aligned_cols=149  Identities=19%  Similarity=0.281  Sum_probs=117.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH----------------------
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS----------------------   84 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~----------------------   84 (188)
                      ..+.+.+|+.+++.++||||+++++++        ......++++||+.++++..+..                      
T Consensus        51 ~~~~~~~e~~~~~~l~h~~iv~~~~~~--------~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~  122 (283)
T cd05091          51 LREEFKHEAMMRSRLQHPNIVCLLGVV--------TKEQPLSMIFSYCSHSDLHEFLVMRSPHSDVGSTDDDKTVKSTLE  122 (283)
T ss_pred             HHHHHHHHHHHHhcCCCCCcCeEEEEE--------cCCCceEEEEEcCCCCcHHHHHHhcCCCccccccccccccccccC
Confidence            345688999999999999999999975        34556899999999998876531                      


Q ss_pred             --HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCcccc
Q psy7174          85 --HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLF  135 (188)
Q Consensus        85 --~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~  135 (188)
                        .+..++ .|++.||.|||+++       |.|+       +|++|||+++.             .++..|  +|||.+.
T Consensus       123 ~~~~~~~~-~ql~~aL~~lH~~gi~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~  199 (283)
T cd05091         123 PADFVHIV-TQIAAGMEFLSSHHVVHKDLATRNVLVFDKLNVKISDLGLFREVYAADYYKLMGNSLLPIRW--MSPEAIM  199 (283)
T ss_pred             HHHHHHHH-HHHHHHHHHHHHcCccccccchhheEecCCCceEecccccccccccchheeeccCccCCccc--cCHHHHh
Confidence              234556 79999999999988       6666       59999997441             224578  9999987


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         136 GARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       136 ~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +.. ++.++|+||+||++|||++ |.+||.+.+..+....+......+.++.+
T Consensus       200 ~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~  251 (283)
T cd05091         200 YGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVIEMIRNRQVLPCPDDC  251 (283)
T ss_pred             cCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCcCCCCCCC
Confidence            655 8999999999999999997 89999888777777776655444444443

Protein Tyrosine Kinase (PTK) family; Receptor tyrosine kinase-like Orphan Receptor 2 (Ror2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ror proteins are orphan receptor tyr kinases (RTKs) containing an extracellular region with immunoglobulin-like, cysteine-rich, and kringle domains, a transmembrane segment, and an intracellular catalytic domain. Ror RTKs are unrelated to the nuclear receptor subfamily called retinoid-related orphan receptors (RORs). RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase cataly

>cd05085 PTKc_Fer Catalytic domain of the Protein Tyrosine Kinase, Fer

Probab=99.92  E-value=4e-24  Score=163.20  Aligned_cols=162  Identities=19%  Similarity=0.264  Sum_probs=120.7

Q ss_pred             cccccc-cCCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..+....+++|..    ..+....+.+|++++++++||||+++++++        ......++++||++++++
T Consensus         8 ~g~vy~~~~~~~~~~a~K~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L   79 (250)
T cd05085           8 FGEVFKGTLKDKTPVAVKTCKEDLPQELKIKFLSEARILKQYDHPNIVKLIGVC--------TQRQPIYIVMELVPGGDF   79 (250)
T ss_pred             CceEEEEEecCCcEEEEEecCCcCCHHHHHHHHHHHHHHHhCCCCCcCeEEEEE--------ecCCccEEEEECCCCCcH
Confidence            677887 2222223334432    233345688999999999999999999976        345678999999999998


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          80 ARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        80 ~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      ..+.         ..+..+. .|+++||.|||+++       |+|+       +|++|||++..            .++.
T Consensus        80 ~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (250)
T cd05085          80 LSFLRKKKDELKTKQLVKFA-LDAAAGMAYLESKNCIHRDLAARNCLVGENNVLKISDFGMSRQEDDGIYSSSGLKQIPI  158 (250)
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeecccChheEEEcCCCeEEECCCccceeccccccccCCCCCCcc
Confidence            8752         3445566 79999999999988       6665       59999998642            1234


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .|  +|||.+.... ++.++|+||+|+++|++++ |..||.+.+.......+...
T Consensus       159 ~y--~aPE~~~~~~-~~~~~Di~slG~ll~~~~~~g~~p~~~~~~~~~~~~~~~~  210 (250)
T cd05085         159 KW--TAPEALNYGR-YSSESDVWSYGILLWETFSLGVCPYPGMTNQQAREQVEKG  210 (250)
T ss_pred             cc--cCHHHhccCC-CCchhHHHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcC
Confidence            58  9999987654 8899999999999999998 99999877665555555443

Protein Tyrosine Kinase (PTK) family; Fer kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fer kinase is a member of the Fes subfamily of proteins which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. Fer kinase is expressed in a wide variety of tissues, and is found to reside in both the cytoplasm and the nucleus. It plays important roles in neuronal polarization and neurite development, cytoskeletal reorganization, cell migration, growth factor signaling, and the regulation of cell-c

>cd07841 STKc_CDK7 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 7

Probab=99.92  E-value=8.4e-25  Score=171.19  Aligned_cols=149  Identities=44%  Similarity=0.742  Sum_probs=121.3

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|++++++++|+||+++++++        .++...++++||+ ++++..+.         ..+..++ .|+++||
T Consensus        46 ~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~-~~~L~~~i~~~~~~~~~~~~~~~~-~qi~~al  115 (298)
T cd07841          46 NFTALREIKLLQELKHPNIIGLLDVF--------GHKSNINLVFEFM-ETDLEKVIKDKSIVLTPADIKSYM-LMTLRGL  115 (298)
T ss_pred             hHHHHHHHHHHhhcCCCCChhhhhee--------ecCCEEEEEEccc-CCCHHHHHhccCCCCCHHHHHHHH-HHHHHHH
Confidence            34567899999999999999999975        3466889999999 88887652         3455566 8999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccccc-----------ccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRHV-----------CTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~~-----------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      .|||+++       |+|+       +||+|||++...           ++..|  +|||.+.+...++.++|+||+||++
T Consensus       116 ~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slG~il  193 (298)
T cd07841         116 EYLHSNWILHRDLKPNNLLIASDGVLKLADFGLARSFGSPNRKMTHQVVTRWY--RAPELLFGARHYGVGVDMWSVGCIF  193 (298)
T ss_pred             HHHHhCCeeecCCChhhEEEcCCCCEEEccceeeeeccCCCccccccccceee--eCHHHHhCCCCCCcHHHHHHHHHHH
Confidence            9999998       5565       599999986532           34568  9999986544578999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +++++|.+||.+.++.+.+.++...++.|.+..||
T Consensus       194 ~e~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (298)
T cd07841         194 AELLLRVPFLPGDSDIDQLGKIFEALGTPTEENWP  228 (298)
T ss_pred             HHHHcCCccccCCccHHHHHHHHHHcCCCchhhhh
Confidence            99999999999988888888888877777666553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 7 (CDK7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK7 plays essential roles in the cell cycle and in transcription. It associates with cyclin H and MAT1 and acts as a CDK-Activating Kinase (CAK) by phosphorylating and activating cell cycle CDKs (CDK1/2/4/6). In the brain, it activates CDK5. CDK7 is

>cd08219 STKc_Nek3 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 3

Probab=99.92  E-value=1.2e-24  Score=166.74  Aligned_cols=142  Identities=19%  Similarity=0.230  Sum_probs=114.5

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQI   94 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~qi   94 (188)
                      ....+.+.+|+.+++.++||||+++++.+        .++...++++||++++++..+          ++.+..++ .|+
T Consensus        39 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~i  109 (255)
T cd08219          39 SSAVEDSRKEAVLLAKMKHPNIVAFKESF--------EADGHLYIVMEYCDGGDLMQKIKLQRGKLFPEDTILQWF-VQM  109 (255)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEEEEE--------EECCEEEEEEeeCCCCcHHHHHHhccCCCCCHHHHHHHH-HHH
Confidence            34557788999999999999999999975        456788999999999988764          23345566 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      +.||.|||+++       |+|+       ++++|||.+.           ..++..|  +|||++.+.. ++.++|+||+
T Consensus       110 ~~al~~lH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~-~~~~~Dv~sl  186 (255)
T cd08219         110 CLGVQHIHEKRVLHRDIKSKNIFLTQNGKVKLGDFGSARLLTSPGAYACTYVGTPYY--VPPEIWENMP-YNNKSDIWSL  186 (255)
T ss_pred             HHHHHHHhhCCcccCCCCcceEEECCCCcEEEcccCcceeecccccccccccCCccc--cCHHHHccCC-cCchhhhhhh
Confidence            99999999988       5665       5899999754           3456678  9999987755 8999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+++|+|++|..||.+.+.......+.+.
T Consensus       187 G~i~~~l~~g~~p~~~~~~~~~~~~~~~~  215 (255)
T cd08219         187 GCILYELCTLKHPFQANSWKNLILKVCQG  215 (255)
T ss_pred             chhheehhhccCCCCCCCHHHHHHHHhcC
Confidence            99999999999999877665555544433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 3 (Nek3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek3 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek3 is primarily localized in the cytoplasm and shows no cell cycle-dependent changes in its activity. It is present in the axons of neurons and affects morphogenesis and polarity through its regulation of microtubule acetylation. Nek3 modulates the signaling of the prolactin receptor through its activati

>cd06643 STKc_SLK Catalytic domain of the Protein Serine/Threonine Kinase, Ste20-like kinase

Probab=99.92  E-value=2.5e-24  Score=167.37  Aligned_cols=162  Identities=19%  Similarity=0.215  Sum_probs=121.6

Q ss_pred             cccccc-cCCc-cccccccc---cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMAR---CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~---~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..+. ...++++.   ...+..+.+.+|+++++.++||||++++++|        ..+...++++||+.++++
T Consensus        18 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~--------~~~~~~~~v~e~~~~~~l   89 (282)
T cd06643          18 FGKVYKAQNKETGVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF--------YYENNLWILIEFCAGGAV   89 (282)
T ss_pred             CeEEEEEEECCCCeEEEEEEeCCCCHHHHHHHHHHHHHHHHCCCCCeeeEEEEE--------eeCCEEEEEEEecCCCcH
Confidence            677776 2221 11233333   2344556788999999999999999999976        345678999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      ...         +..+..++ .|+++||.|||+.+       |+|+       +|++|||++.           ..++..
T Consensus        90 ~~~~~~~~~~l~~~~~~~~~-~qi~~~L~~LH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  168 (282)
T cd06643          90 DAVMLELERPLTEPQIRVVC-KQTLEALNYLHENKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY  168 (282)
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCCcccEEEccCCCEEEcccccccccccccccccccccccc
Confidence            764         23455566 79999999999988       6666       6999999753           346778


Q ss_pred             ccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         126 CTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       126 y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |  +|||++..    ...++.++|+||+||++|++++|++||.+.++.+....+..
T Consensus       169 y--~aPE~~~~~~~~~~~~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~~~  222 (282)
T cd06643         169 W--MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAQIEPPHHELNPMRVLLKIAK  222 (282)
T ss_pred             c--cCHhhccccCCCCCCCCccchhhhHHHHHHHHccCCCCccccCHHHHHHHHhh
Confidence            9  99999842    22367899999999999999999999987776655555543

Serine/threonine kinases (STKs), Ste20-like kinase (SLK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The SLK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SLK promotes apoptosis through apoptosis signal-regulating kinase 1 (ASK1) and the mitogen-activated protein kinase (MAPK) p38. It acts as a MAPK kinase kinase (MAPKKK) by phosphorylating ASK1, resulting in the phosphorylation of p38. SLK also plays a role in mediating actin reorganization. It is part of a microtubule-associated complex that is targeted at adhesion sites, and is required in focal adhesion turnover and in regulating cell migration.

>KOG0193|consensus

Probab=99.92  E-value=1.5e-25  Score=183.28  Aligned_cols=167  Identities=14%  Similarity=0.078  Sum_probs=128.6

Q ss_pred             cccccc--cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ--QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+  .+--+++|.+.-.  +.+..+.|++|+..+++-+|.||+=|.|+|.         .....||..+|.|.+|.
T Consensus       405 FGtV~Rg~whGdVAVK~Lnv~~pt~~qlqaFKnEVa~lkkTRH~NIlLFMG~~~---------~p~~AIiTqwCeGsSLY  475 (678)
T KOG0193|consen  405 FGTVYRGRWHGDVAVKLLNVDDPTPEQLQAFKNEVAVLKKTRHENILLFMGACM---------NPPLAIITQWCEGSSLY  475 (678)
T ss_pred             ccceeecccccceEEEEEecCCCCHHHHHHHHHHHHHHhhcchhhheeeehhhc---------CCceeeeehhccCchhh
Confidence            889998  4445556655543  4567788999999999999999999999973         22349999999999998


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccc
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTL  124 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~  124 (188)
                      .+         ...+..++ +||+.||.|||.++       .+||       |||.|||+.+             ..|..
T Consensus       476 ~hlHv~etkfdm~~~idIA-qQiaqGM~YLHAK~IIHrDLKSnNIFl~~~~kVkIgDFGLatvk~~w~g~~q~~qp~gsi  554 (678)
T KOG0193|consen  476 THLHVQETKFDMNTTIDIA-QQIAQGMDYLHAKNIIHRDLKSNNIFLHEDLKVKIGDFGLATVKTRWSGEQQLEQPHGSL  554 (678)
T ss_pred             hhccchhhhhhHHHHHHHH-HHHHHhhhhhhhhhhhhhhccccceEEccCCcEEEecccceeeeeeeccccccCCCccch
Confidence            85         23456677 89999999999998       4455       7999999854             23456


Q ss_pred             cccCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         125 YCTRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       125 ~y~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      .|  +|||++.-  ...|+..+|||||||++|||++|..||...+..+.+-.+.+++..|.
T Consensus       555 lw--mAPEvIRmqd~nPfS~qSDVYaFGiV~YELltg~lPysi~~~dqIifmVGrG~l~pd  613 (678)
T KOG0193|consen  555 LW--MAPEVIRMQDDNPFSFQSDVYAFGIVWYELLTGELPYSIQNRDQIIFMVGRGYLMPD  613 (678)
T ss_pred             hh--hcHHHHhhcccCCCCcccchhhhhHHHHHHHhCcCCcCCCChhheEEEecccccCcc
Confidence            78  99999842  23499999999999999999999999985555444444455544443

>KOG0664|consensus

Probab=99.92  E-value=1e-26  Score=175.28  Aligned_cols=175  Identities=29%  Similarity=0.494  Sum_probs=137.4

Q ss_pred             Ccccccccc-cCCccc-ccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCC-CccEEEEec
Q psy7174           2 FEVCFKPFQ-QSKWSP-NTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLST-SSDYIVVKI   73 (188)
Q Consensus         2 ~~~~g~v~~-~~~~~~-~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~-~~~~iv~e~   73 (188)
                      |--||.||. ++.... .+++||.     .....+++.+|++.|..++|.|+...+++    .++...+- ...|++.|.
T Consensus        63 YGAFGVVWsVTDPRdgrrvalkK~pnvfq~L~s~krvFre~kmLcfFkHdNVLSaLDI----LQPph~dfFqEiYV~TEL  138 (449)
T KOG0664|consen   63 YGAFGVVWSVTDPRSGKRVALKKMPNVFQNLASCKRVFREIKMLSSFRHDNVLSLLDI----LQPANPSFFQELYVLTEL  138 (449)
T ss_pred             ccceeEEEeccCCCCccchhHhhcchHHHHHHHHHHHHHHHHHHHhhccccHHHHHHh----cCCCCchHHHHHHHHHHH
Confidence            445899997 444443 6666663     34455778899999999999999999987    23222222 234666666


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------  119 (188)
                      + ..+|.++        .++++.+. .||+.||+|||+.+       |.|+       +||||||+++            
T Consensus       139 m-QSDLHKIIVSPQ~Ls~DHvKVFl-YQILRGLKYLHsA~ILHRDIKPGNLLVNSNCvLKICDFGLARvee~d~~~hMTq  216 (449)
T KOG0664|consen  139 M-QSDLHKIIVSPQALTPDHVKVFV-YQILRGLKYLHTANILHRDIKPGNLLVNSNCILKICDFGLARTWDQRDRLNMTH  216 (449)
T ss_pred             H-HhhhhheeccCCCCCcchhhhhH-HHHHhhhHHHhhcchhhccCCCccEEeccCceEEecccccccccchhhhhhhHH
Confidence            5 3455543        35677888 89999999999988       5555       6999999966            


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      .+-|.+|  +|||.+.+.+.|+...||||+|||+.|++..+..|+..++.++++.|...+|+|+-
T Consensus       217 EVVTQYY--RAPEiLMGaRhYs~AvDiWSVGCIFaELLgRrILFQAq~PiqQL~lItdLLGTPs~  279 (449)
T KOG0664|consen  217 EVVTQYY--RAPELLMGARRYTGAVDIWSVGCIFAELLQRKILFQAAGPIEQLQMIIDLLGTPSQ  279 (449)
T ss_pred             HHHHHHh--ccHHHhhcchhhcCccceehhhHHHHHHHhhhhhhhccChHHHHHHHHHHhCCCcH
Confidence            2346789  99999999999999999999999999999999999999999999999999999864

>cd05070 PTKc_Fyn_Yrk Catalytic domain of the Protein Tyrosine Kinases, Fyn and Yrk

Probab=99.92  E-value=3.5e-24  Score=164.60  Aligned_cols=142  Identities=20%  Similarity=0.351  Sum_probs=113.1

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILEG   97 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~g   97 (188)
                      .+.+.+|+.++++++|+|++++++++         .+...++++||+.++++..+.          ..+..++ .|++.|
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~a  114 (260)
T cd05070          45 PESFLEEAQIMKKLRHDKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFLKDGEGRALKLPNLVDMA-AQVAAG  114 (260)
T ss_pred             HHHHHHHHHHHHhcCCCceEEEEeEE---------CCCCcEEEEEecCCCcHHHHHHhcCCCCCCHHHHHHHH-HHHHHH
Confidence            46789999999999999999999873         234579999999999987752          2355666 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      |.|||+++       |+|+       +|++|||++...            ++..|  +|||.+.... ++.++|+||||+
T Consensus       115 l~~lH~~~i~H~di~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~  191 (260)
T cd05070         115 MAYIERMNYIHRDLRSANILVGDGLVCKIADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGR-FTIKSDVWSFGI  191 (260)
T ss_pred             HHHHHHCCcccCCCccceEEEeCCceEEeCCceeeeeccCcccccccCCCCCccc--cChHHHhcCC-CcchhhhHHHHH
Confidence            99999988       6665       589999985421            23458  9999987655 889999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         152 IICELLL-KAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       152 il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      ++|++++ |.+||.+.+..+....+......|
T Consensus       192 ~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05070         192 LLTELVTKGRVPYPGMNNREVLEQVERGYRMP  223 (260)
T ss_pred             HHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCC
Confidence            9999998 899998877766666665443333

Protein Tyrosine Kinase (PTK) family; Fyn and Yrk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fyn and Yrk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that r

>cd05089 PTKc_Tie1 Catalytic domain of the Protein Tyrosine Kinase, Tie1

Probab=99.92  E-value=3.5e-24  Score=167.97  Aligned_cols=165  Identities=16%  Similarity=0.148  Sum_probs=123.2

Q ss_pred             cccccc-c---C-C-c-ccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q---S-K-W-SPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~---~-~-~-~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .   . . . .+++.++.. .....+.+.+|+++++++ +||||+++++++        .+....++++||++
T Consensus        15 ~g~v~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--------~~~~~~~lv~e~~~   86 (297)
T cd05089          15 FGQVIRAMIKKDGLKMNAAIKMLKEFASENDHRDFAGELEVLCKLGHHPNIINLLGAC--------ENRGYLYIAIEYAP   86 (297)
T ss_pred             cceEEEEEecCCCCcceeEEEEccccCCHHHHHHHHHHHHHHHhhcCCCchhheEEEE--------ccCCcceEEEEecC
Confidence            677776 1   1 1 1 224444432 334456788999999999 699999999975        34567899999999


Q ss_pred             cccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc
Q psy7174          76 KTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI  117 (188)
Q Consensus        76 ~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~  117 (188)
                      ++++..+.                        ..+..++ .|++.||+|||+.+       |+|+       +|++|||+
T Consensus        87 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~al~~lH~~~ivH~dlkp~Nill~~~~~~kl~dfg~  165 (297)
T cd05089          87 YGNLLDFLRKSRVLETDPAFAKEHGTASTLTSQQLLQFA-SDVATGMQYLSEKQFIHRDLAARNVLVGENLASKIADFGL  165 (297)
T ss_pred             CCcHHHHHHhccccccccccccccCccCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCcCCcceEEECCCCeEEECCcCC
Confidence            99987653                        2345566 79999999999988       6776       49999998


Q ss_pred             ccc----------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCC
Q psy7174         118 GRH----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       118 ~~~----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      +..          ..+..|  +|||.+.+.. ++.++|||||||++|+|++ |..||.+.+..+....+.+....
T Consensus       166 ~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~DvwSlG~il~el~t~g~~pf~~~~~~~~~~~~~~~~~~  237 (297)
T cd05089         166 SRGEEVYVKKTMGRLPVRW--MAIESLNYSV-YTTKSDVWSFGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRM  237 (297)
T ss_pred             CccccceeccCCCCcCccc--cCchhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCC
Confidence            641          113358  9999987755 8999999999999999997 99999887776666666554433

Protein Tyrosine Kinase (PTK) family; Tie1; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie1 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. No specific ligand has been identified for Tie1, although the angiopoietin, Ang-1, binds to Tie1 through integrins at high concentrations.

>cd05065 PTKc_EphR_B Catalytic domain of the Protein Tyrosine Kinases, Class EphB Ephrin Receptors

Probab=99.92  E-value=4e-24  Score=165.05  Aligned_cols=159  Identities=16%  Similarity=0.196  Sum_probs=121.6

Q ss_pred             ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHH
Q psy7174          17 NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHL   86 (188)
Q Consensus        17 ~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~   86 (188)
                      +|.++.. .....+++.+|+.++++++||||+++++++        .++...++++||+.++++..+.         ..+
T Consensus        37 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~ni~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~  108 (269)
T cd05065          37 IKTLKSGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV--------TKSRPVMIITEFMENGALDSFLRQNDGQFTVIQL  108 (269)
T ss_pred             EEEcCCCCCHHHHHHHHHHHHHHHhCCCcCcceEEEEE--------CCCCceEEEEecCCCCcHHHHHhhCCCCCCHHHH
Confidence            4444332 344567889999999999999999999975        4566789999999999988752         345


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccccc----------------cccccCCCCccccc
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVC----------------TLYCTRGAPELLFG  136 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~----------------~~~y~~~aPe~~~~  136 (188)
                      ..++ .|++.||.|||+++       |+|+       +|++|||++....                +..|  +|||.+..
T Consensus       109 ~~i~-~~l~~al~~lH~~g~~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~  185 (269)
T cd05065         109 VGML-RGIAAGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSSLGGKIPIRW--TAPEAIAY  185 (269)
T ss_pred             HHHH-HHHHHHHHHHHHCCEeecccChheEEEcCCCcEEECCCccccccccCccccccccccCCCcceee--cCHhHhcc
Confidence            5566 79999999999988       5565       5999999754211                1258  89999876


Q ss_pred             cCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         137 ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       137 ~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      .. ++.++|+||+||++||+++ |..||.+.+..+....+.+....|.+..+
T Consensus       186 ~~-~~~~~DvwslG~~l~e~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~~~~  236 (269)
T cd05065         186 RK-FTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVINAIEQDYRLPPPMDC  236 (269)
T ss_pred             Cc-ccchhhhhhhHHHHHHHhcCCCCCCCCCCHHHHHHHHHcCCcCCCcccC
Confidence            55 8999999999999999886 99999887777766666555554544443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; class EphB receptors; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). Class EphB receptors bind to transmembrane ephrin-B ligands. There are six vertebrate EhpB receptors (EphB1-6), which display promiscuous interactions with three ephrin-B ligands. One exception is EphB2, which also interacts with ephrin A5. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephr

>cd05077 PTK_Jak1_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.92  E-value=4.3e-24  Score=164.71  Aligned_cols=131  Identities=15%  Similarity=0.151  Sum_probs=105.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      +..+.+.+|+.+++.++||||+++++++        ..+...++++||+.++++..+.         ..+..++ .|+++
T Consensus        46 ~~~~~~~~~~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~i~-~qi~~  116 (262)
T cd05077          46 DISLAFFETASMMRQVSHKHIVLLYGVC--------VRDVENIMVEEFVEFGPLDLFMHRKSDVLTTPWKFKVA-KQLAS  116 (262)
T ss_pred             hHHHHHHHHHHHHHhCCCCCEeeEEEEE--------ecCCCCEEEEecccCCCHHHHHHhcCCCCCHHHHHHHH-HHHHH
Confidence            3445678899999999999999999975        3456779999999999987652         3445566 79999


Q ss_pred             HHHHHhhcC-------CCCe--------------EEEecCCccc-------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          97 GLQALKSSM-------PALL--------------KKFVGIGIGR-------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        97 gl~~lH~~~-------~~~i--------------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ||.|||+.+       |.|+              +|++|||++.       ..++..|  +|||.+.....++.++||||
T Consensus       117 ~l~~lH~~~ivH~dlkp~Nill~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Diws  194 (262)
T cd05077         117 ALSYLEDKDLVHGNVCTKNILLAREGIDGECGPFIKLSDPGIPITVLSRQECVERIPW--IAPECVEDSKNLSIAADKWS  194 (262)
T ss_pred             HHHHhhhCCeECCCCCcccEEEecCCccCCCCceeEeCCCCCCccccCcccccccccc--cChhhhcCCCCCCchhHHHH
Confidence            999999988       5554              4789999764       2356678  99999875455899999999


Q ss_pred             HHHHHHHHH-hCCCCCCCCC
Q psy7174         149 VGCIICELL-LKAPFLPGES  167 (188)
Q Consensus       149 lG~il~el~-~g~~pf~~~~  167 (188)
                      +||++|+|+ .|..|+.+..
T Consensus       195 lG~~l~el~~~~~~p~~~~~  214 (262)
T cd05077         195 FGTTLWEICYNGEIPLKDKT  214 (262)
T ss_pred             HHHHHHHHHhCCCCCCCCcc
Confidence            999999997 5888886544

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalytic dom

>cd05076 PTK_Tyk2_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=3.7e-24  Score=166.17  Aligned_cols=132  Identities=14%  Similarity=0.108  Sum_probs=106.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~g   97 (188)
                      ..+.+.+|+++++.++||||+++++++        .++...+++|||++++++..+.         ..+..++ .|++.|
T Consensus        59 ~~~~~~~~~~~~~~l~h~niv~~~~~~--------~~~~~~~lv~ey~~~g~L~~~l~~~~~~~~~~~~~~i~-~qi~~~  129 (274)
T cd05076          59 IALAFFETASLMSQVSHIHLAFVHGVC--------VRGSENIMVEEFVEHGPLDVCLRKEKGRVPVAWKITVA-QQLASA  129 (274)
T ss_pred             HHHHHHHHHHHHhcCCCCCeeeEEEEE--------EeCCceEEEEecCCCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHH
Confidence            345678899999999999999999986        3456789999999999987752         3344556 799999


Q ss_pred             HHHHhhcC-------CCCe--------------EEEecCCccc-------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          98 LQALKSSM-------PALL--------------KKFVGIGIGR-------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        98 l~~lH~~~-------~~~i--------------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      |+|||+.+       |+|+              +|++|||++.       ..++..|  +|||.+.+...++.++|+|||
T Consensus       130 l~~lH~~~iiH~dlkp~Nill~~~~~~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~--~aPe~~~~~~~~~~~~Dv~sl  207 (274)
T cd05076         130 LSYLEDKNLVHGNVCAKNILLARLGLAEGTSPFIKLSDPGVSFTALSREERVERIPW--IAPECVPGGNSLSTAADKWSF  207 (274)
T ss_pred             HHHHHcCCccCCCCCcccEEEeccCcccCccceeeecCCccccccccccccccCCcc--cCchhhcCCCCCCcHHHHHHH
Confidence            99999988       6665              4789999753       2356678  999998764458999999999


Q ss_pred             HHHHHHHH-hCCCCCCCCChH
Q psy7174         150 GCIICELL-LKAPFLPGESDL  169 (188)
Q Consensus       150 G~il~el~-~g~~pf~~~~~~  169 (188)
                      ||++||++ +|+.||.+..+.
T Consensus       208 G~~l~el~~~g~~p~~~~~~~  228 (274)
T cd05076         208 GTTLLEICFDGEVPLKERTPS  228 (274)
T ss_pred             HHHHHHHHhCCCCCccccChH
Confidence            99999995 689999765543

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity of the C-terminal catalyt

>cd05059 PTKc_Tec_like Catalytic domain of Tec-like Protein Tyrosine Kinases

Probab=99.92  E-value=4.3e-24  Score=163.89  Aligned_cols=163  Identities=15%  Similarity=0.145  Sum_probs=120.7

Q ss_pred             cccccc-cCC---ccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSK---WSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~---~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      +|.||+ ..+   ..++|.+.+. ......+.+|++++++++||||+++++++        ......++++||++++++.
T Consensus        17 ~~~v~~~~~~~~~~~~iK~~~~~-~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   87 (256)
T cd05059          17 FGVVHLGKWRGKIDVAIKMIREG-AMSEDDFIEEAKVMMKLSHPNLVQLYGVC--------TKQRPIFIVTEYMANGCLL   87 (256)
T ss_pred             CceEEEeEecCCccEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEEEEEEEE--------cCCCceEEEEecCCCCCHH
Confidence            677776 222   2223333222 12335688899999999999999999975        3456789999999999987


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc---------c---ccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV---------C---TLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~---------~---~~~  125 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |+|+       +|++|||+++..         +   +..
T Consensus        88 ~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dl~p~ni~i~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05059          88 NYLRERKGKLGTEWLLDMC-SDVCEAMEYLESNGFIHRDLAARNCLVGEDNVVKVSDFGLARYVLDDQYTSSQGTKFPVK  166 (256)
T ss_pred             HHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHCCcccccccHhhEEECCCCcEEECCcccceecccccccccCCCCCCcc
Confidence            752         2345566 79999999999988       5555       699999976522         1   235


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      |  +|||.+.+.. ++.++|+||+|+++|++++ |.+||.+.++.+....+....+
T Consensus       167 y--~~Pe~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~  219 (256)
T cd05059         167 W--APPEVFDYSR-FSSKSDVWSFGVLMWEVFSEGKMPYERFSNSEVVESVSAGYR  219 (256)
T ss_pred             c--cCHHHhccCC-CCchhhHHHHHHHHHHHhccCCCCCCCCCHHHHHHHHHcCCc
Confidence            8  9999988755 8999999999999999998 8999987766666555554433

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase expressed in hepatocellular carcinoma (Tec) subfamily; catalytic (c) domain. The Tec subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tec kinases are cytoplasmic (or nonreceptor) tyr kinases (nRTKs) with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows

>cd05071 PTKc_Src Catalytic domain of the Protein Tyrosine Kinase, Src

Probab=99.92  E-value=4.1e-24  Score=164.67  Aligned_cols=137  Identities=21%  Similarity=0.326  Sum_probs=109.8

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILEG   97 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~g   97 (188)
                      .+++.+|++++++++||||+++++.+         .+...++++||+.++++..+.          ..+..++ .|+++|
T Consensus        45 ~~~~~~E~~~l~~l~~~~i~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~a  114 (262)
T cd05071          45 PEAFLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMA-AQIASG  114 (262)
T ss_pred             HHHHHHHHHHHHhCCCCCcceEEEEE---------CCCCcEEEEEcCCCCcHHHHHhhccccCCCHHHHHHHH-HHHHHH
Confidence            45789999999999999999999863         234579999999999987753          2345566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccc------------cccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      |.|||+.+       |.|+       +||+|||.+..            .++..|  +|||...+.. ++.++|+||+||
T Consensus       115 L~~lH~~~i~H~dl~p~Nill~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~DvwslG~  191 (262)
T cd05071         115 MAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGR-FTIKSDVWSFGI  191 (262)
T ss_pred             HHHHHHCCccccccCcccEEEcCCCcEEeccCCceeeccccccccccCCccccee--cCHhHhccCC-CCchhhHHHHHH
Confidence            99999988       6666       59999997642            123468  9999987655 899999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         152 IICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       152 il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++|++++ |.+||.+....+....+..
T Consensus       192 ~l~ellt~g~~p~~~~~~~~~~~~~~~  218 (262)
T cd05071         192 LLTELTTKGRVPYPGMVNREVLDQVER  218 (262)
T ss_pred             HHHHHHcCCCCCCCCCChHHHHHHHhc
Confidence            9999999 8999987766655555543

Protein Tyrosine Kinase (PTK) family; Src kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) is a cytoplasmic (or non-receptor) tyr kinase, containing an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region with a conserved tyr. It is activated by autophosphorylation at the tyr kinase domain, and is negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). c-Src is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is invo

>cd05063 PTKc_EphR_A2 Catalytic domain of the Protein Tyrosine Kinase, Ephrin Receptor A2

Probab=99.92  E-value=5.5e-24  Score=164.13  Aligned_cols=149  Identities=15%  Similarity=0.201  Sum_probs=118.0

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      ....+.+.+|++++++++||||+++.+++        .+....++++||++++++..+.         ..+..++ .|++
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~  117 (268)
T cd05063          47 EKQRQDFLSEASIMGQFSHHNIIRLEGVV--------TKFKPAMIITEYMENGALDKYLRDHDGEFSSYQLVGML-RGIA  117 (268)
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEE--------ccCCCcEEEEEcCCCCCHHHHHHhcCCCCCHHHHHHHH-HHHH
Confidence            34456788999999999999999999975        4456789999999999997753         2345566 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCccccccCCCCchhHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      .|+.|||+.+       |.|+       +|++|||++...              .+..|  +|||.+.+.. ++.++|+|
T Consensus       118 ~al~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Dv~  194 (268)
T cd05063         118 AGMKYLSDMNYVHRDLAARNILVNSNLECKVSDFGLSRVLEDDPEGTYTTSGGKIPIRW--TAPEAIAYRK-FTSASDVW  194 (268)
T ss_pred             HHHHHHHHCCeeccccchhhEEEcCCCcEEECCCccceecccccccceeccCCCcCcee--cCHHHhhcCC-cChHhHHH
Confidence            9999999988       6666       599999976422              12248  9999987754 89999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         148 AVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       148 slG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      |+||++|++++ |+.||...+..+....+......|.+.
T Consensus       195 slG~il~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~~~  233 (268)
T cd05063         195 SFGIVMWEVMSFGERPYWDMSNHEVMKAINDGFRLPAPM  233 (268)
T ss_pred             HHHHHHHHHHhCCCCCCCcCCHHHHHHHHhcCCCCCCCC
Confidence            99999999997 999998877777777776555544444

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; EphA2 receptor; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment, and a cytoplasmic tyr kinase domain. Binding of the ephrin ligand to EphR requires cell-cell contact since both are anchored

>cd07845 STKc_CDK10 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 10

Probab=99.92  E-value=1.9e-24  Score=170.24  Aligned_cols=150  Identities=38%  Similarity=0.620  Sum_probs=119.5

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------HHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~~~~~~~~~~qi~~gl~   99 (188)
                      ....+|++++++++|+||+++++++..      ......++++||+.+ ++..+         ...+..++ .|+++||.
T Consensus        51 ~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~-~l~~~l~~~~~~l~~~~~~~~~-~qi~~~l~  122 (309)
T cd07845          51 ISSLREITLLLNLRHPNIVELKEVVVG------KHLDSIFLVMEYCEQ-DLASLLDNMPTPFSESQVKCLM-LQLLRGLQ  122 (309)
T ss_pred             chhhHHHHHHHhCCCCCCcceEEEEec------CCCCeEEEEEecCCC-CHHHHHHhcccCCCHHHHHHHH-HHHHHHHH
Confidence            346789999999999999999998622      223467999999975 44432         23455666 89999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccccc-----------ccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGRHV-----------CTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~~~-----------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      |||+.+       |+|+       +||+|||++...           ++..|  +|||.+.+...++.++|+||+||++|
T Consensus       123 ~lH~~~i~H~dl~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~DvwslG~il~  200 (309)
T cd07845         123 YLHENFIIHRDLKVSNLLLTDKGCLKIADFGLARTYGLPAKPMTPKVVTLWY--RAPELLLGCTTYTTAIDMWAVGCILA  200 (309)
T ss_pred             HHHhCCeecCCCCHHHEEECCCCCEEECccceeeecCCccCCCCcccccccc--cChhhhcCCCCcCchHHHHHHHHHHH
Confidence            999998       4444       699999976532           34568  99999876555889999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         155 ELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       155 el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ++++|++||.+.++.+.+..+.+..+.|....||
T Consensus       201 el~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  234 (309)
T cd07845         201 ELLAHKPLLPGKSEIEQLDLIIQLLGTPNESIWP  234 (309)
T ss_pred             HHHhCCCCCCCCCHHHHHHHHHHhcCCCChhhch
Confidence            9999999999999999999998888877766664

Serine/Threonine Kinases (STKs), Cyclin-dependent protein Kinase 10 (CDK10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK10, also called PISSLRE, is essential for cell growth and proliferation, and acts through the G2/M phase of the cell cycle. CDK10 has also been identified as an important factor in endocrine therapy resistance in breast cancer. CDK10 silencing

>KOG0668|consensus

Probab=99.92  E-value=6.4e-25  Score=161.79  Aligned_cols=146  Identities=27%  Similarity=0.511  Sum_probs=124.4

Q ss_pred             hhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----HHHHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----~~~~~~~~~~qi~~gl~~  100 (188)
                      ..+.+.||++||+.|. ||||++++++.      ........-+++|++...++..+     .-.+++++ .|++.||.|
T Consensus        75 kkkKIkREikIL~nL~gg~NIi~L~DiV------~Dp~SktpaLiFE~v~n~Dfk~ly~tl~d~dIryY~-~elLkALdy  147 (338)
T KOG0668|consen   75 KKKKIKREIKILQNLRGGPNIIKLLDIV------KDPESKTPSLIFEYVNNTDFKQLYPTLTDYDIRYYI-YELLKALDY  147 (338)
T ss_pred             HHHHHHHHHHHHHhccCCCCeeehhhhh------cCccccCchhHhhhhccccHHHHhhhhchhhHHHHH-HHHHHHHhH
Confidence            3577999999999998 99999999985      33556677899999999998875     34688999 899999999


Q ss_pred             HhhcC-------CCCe--------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHH
Q psy7174         101 LKSSM-------PALL--------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus       101 lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~e  155 (188)
                      ||++|       |.|+        |+++|+|++.          .+.+..|  ..||++...+.|+...|+|||||.+..
T Consensus       148 CHS~GImHRDVKPhNvmIdh~~rkLrlIDWGLAEFYHp~~eYnVRVASRyf--KGPELLVdy~~YDYSLD~WS~GcmlA~  225 (338)
T KOG0668|consen  148 CHSMGIMHRDVKPHNVMIDHELRKLRLIDWGLAEFYHPGKEYNVRVASRYF--KGPELLVDYQMYDYSLDMWSLGCMLAS  225 (338)
T ss_pred             HHhcCcccccCCcceeeechhhceeeeeecchHhhcCCCceeeeeeehhhc--CCchheeechhccccHHHHHHHHHHHH
Confidence            99999       6666        6999999865          3456677  899999887779999999999999999


Q ss_pred             HHhC-CCCCCCCChHHHHHHHHhhcCC
Q psy7174         156 LLLK-APFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       156 l~~g-~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      |+.. .|.|.|.++.+++-+|.+.+|+
T Consensus       226 miFrkepFFhG~dN~DQLVkIakVLGt  252 (338)
T KOG0668|consen  226 MIFRKEPFFHGHDNYDQLVKIAKVLGT  252 (338)
T ss_pred             HHhccCcccCCCCCHHHHHHHHHHhCh
Confidence            9875 5667899999999999988775

>cd05045 PTKc_RET Catalytic domain of the Protein Tyrosine Kinase, REarranged during Transfection protein

Probab=99.92  E-value=5.2e-24  Score=166.31  Aligned_cols=141  Identities=17%  Similarity=0.197  Sum_probs=112.4

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------------------
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------------------   84 (188)
                      ...+++.+|+++++.++||||+++++.+        ..+...++++||+.++++..+..                     
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  116 (290)
T cd05045          45 SELRDLLSEFNLLKQVNHPHVIKLYGAC--------SQDGPLLLIVEYAKYGSLRSFLRESRKVGPSYLGSDGNRNSSYL  116 (290)
T ss_pred             HHHHHHHHHHHHHhhCCCCCEeeEEEEE--------ecCCCcEEEEEecCCCCHHHHHHhcCCccccccccccccccccc
Confidence            3456788999999999999999999975        34567899999999999987532                     


Q ss_pred             -----------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccc
Q psy7174          85 -----------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYC  126 (188)
Q Consensus        85 -----------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y  126 (188)
                                 .+..++ .|++.||.|||+.+       |+|+       +|++|||++..             .++..|
T Consensus       117 ~~~~~~~l~~~~~~~i~-~~i~~~l~~LH~~~ivH~dikp~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y  195 (290)
T cd05045         117 DNPDERALTMGDLISFA-WQISRGMQYLAEMKLVHRDLAARNVLVAEGRKMKISDFGLSRDVYEEDSYVKRSKGRIPVKW  195 (290)
T ss_pred             cCccccccCHHHHHHHH-HHHHHHHHHHHHCCeehhhhhhheEEEcCCCcEEeccccccccccCccchhcccCCCCCccc
Confidence                       234555 79999999999988       6666       59999998642             234568


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                        +|||.+.+.. ++.++|+||||+++++|++ |..||.+..+.+....+.+.
T Consensus       196 --~apE~~~~~~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~~~  245 (290)
T cd05045         196 --MAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIAPERLFNLLKTG  245 (290)
T ss_pred             --cCHHHHccCC-cchHhHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHhCC
Confidence              9999987655 8999999999999999998 99999877765554444433

Protein Tyrosine Kinase (PTK) family; RET (REarranged during Transfection) protein; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. RET is a receptor tyr kinase (RTK) containing an extracellular region with four cadherin-like repeats, a calcium-binding site, and a cysteine-rich domain, a transmembrane segment, and an intracellular catalytic domain. It is part of a multisubunit complex that binds glial-derived neurotropic factor (GDNF) family ligands (GFLs) including GDNF, neurturin, artemin, and persephin. GFLs bind RET along with four GPI-anchored coreceptors, bringing two RET molecules together, leadi

>cd07843 STKc_CDC2L1 Catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1

Probab=99.92  E-value=2.7e-24  Score=168.00  Aligned_cols=150  Identities=37%  Similarity=0.655  Sum_probs=120.1

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------HHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~~~~~~~~~~qi~~gl~   99 (188)
                      ..+.+|++++++++||||+++++++..      .+....++++||+.+ ++..+         +..+..++ .|++.||.
T Consensus        49 ~~~~~e~~~l~~l~h~ni~~~~~~~~~------~~~~~~~lv~e~~~~-~L~~~~~~~~~~l~~~~~~~i~-~qi~~aL~  120 (293)
T cd07843          49 ITSLREINILLKLQHPNIVTVKEVVVG------SNLDKIYMVMEYVEH-DLKSLMETMKQPFLQSEVKCLM-LQLLSGVA  120 (293)
T ss_pred             hhHHHHHHHHHhcCCCCEEEEEEEEEe------cCCCcEEEEehhcCc-CHHHHHHhccCCCCHHHHHHHH-HHHHHHHH
Confidence            356789999999999999999997521      223788999999975 55443         34456666 79999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      |||+.+       |+|+       +|++|||++..           .++..|  +|||.+.+...++.++|+||+|++++
T Consensus       121 ~LH~~~i~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~~~~~~~Di~slG~~l~  198 (293)
T cd07843         121 HLHDNWILHRDLKTSNLLLNNRGILKICDFGLAREYGSPLKPYTQLVVTLWY--RAPELLLGAKEYSTAIDMWSVGCIFA  198 (293)
T ss_pred             HHHHCCeeeccCCHHHEEECCCCcEEEeecCceeeccCCccccccccccccc--cCchhhcCCccccchhhHHHHHHHHH
Confidence            999988       4444       69999997542           345568  99999876554789999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         155 ELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       155 el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +|++|.+||.+.+..+.+.++...++.|.+..||
T Consensus       199 ~l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~~~  232 (293)
T cd07843         199 ELLTKKPLFPGKSEIDQLNKIFKLLGTPTEKIWP  232 (293)
T ss_pred             HHHhCCCCCCCCChHHHHHHHHHHhCCCchHHHH
Confidence            9999999999999988888888888777766554

Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CDK11(p110), the

>cd07870 STKc_PFTAIRE2 Catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase

Probab=99.92  E-value=3.5e-24  Score=167.26  Aligned_cols=146  Identities=31%  Similarity=0.534  Sum_probs=112.1

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      ..+.+|+++++.++|+||+++++++        .++...++++||+.++.+..+        ...+..++ .|++.||.|
T Consensus        48 ~~~~~e~~~l~~l~h~ni~~~~~~~--------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~  118 (291)
T cd07870          48 FTAIREASLLKGLKHANIVLLHDII--------HTKETLTFVFEYMHTDLAQYMIQHPGGLHPYNVRLFM-FQLLRGLAY  118 (291)
T ss_pred             HHHHHHHHHHHhcCCCCEeEEEEEE--------ecCCeEEEEEecccCCHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHH
Confidence            4678899999999999999999975        345678999999975444332        23456666 799999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~e  155 (188)
                      ||+.+       |+|+       +||+|||++.           ..++..|  +|||.+.+...++.++|+||+|+++|+
T Consensus       119 lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slG~~l~~  196 (291)
T cd07870         119 IHGQHILHRDLKPQNLLISYLGELKLADFGLARAKSIPSQTYSSEVVTLWY--RPPDVLLGATDYSSALDIWGAGCIFIE  196 (291)
T ss_pred             HHhCCcccCCCChHHEEEcCCCcEEEeccccccccCCCCCCCCCccccccc--cCCceeecCCCCCcHHHHHHHHHHHHH
Confidence            99998       5565       5999999754           2356778  999998764447889999999999999


Q ss_pred             HHhCCCCCCCCCh-HHHHHHHHhhcCCCCCC
Q psy7174         156 LLLKAPFLPGESD-LDQLTRIFQTLGTPSED  185 (188)
Q Consensus       156 l~~g~~pf~~~~~-~~~~~~i~~~~~~p~~~  185 (188)
                      +++|.+||.+.++ .+.+..+....+.|.+.
T Consensus       197 l~~g~~~f~~~~~~~~~~~~~~~~~~~~~~~  227 (291)
T cd07870         197 MLQGQPAFPGVSDVFEQLEKIWTVLGVPTED  227 (291)
T ss_pred             HHhCCCCCCCchhHHHHHHHHHHHcCCCChh
Confidence            9999999976543 34455555555544433

Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal recess

>cd05032 PTKc_InsR_like Catalytic domain of Insulin Receptor-like Protein Tyrosine Kinases

Probab=99.92  E-value=4.5e-24  Score=165.25  Aligned_cols=140  Identities=15%  Similarity=0.268  Sum_probs=112.6

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH------------------HHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS------------------HLR   87 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~------------------~~~   87 (188)
                      .....+.+|+++++.++||||+++++++        ..+...++++||+++++|..+..                  .+.
T Consensus        51 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  122 (277)
T cd05032          51 RERIEFLNEASVMKEFNCHHVVRLLGVV--------STGQPTLVVMELMAKGDLKSYLRSRRPEAENNPGLGPPTLQKFI  122 (277)
T ss_pred             HHHHHHHHHHHHHHhCCCCceeEEEEEE--------cCCCCcEEEEecCCCCCHHHHHHhcccchhhccCCCCCCHHHHH
Confidence            3445788999999999999999999975        34577899999999999987532                  244


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMY  140 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~  140 (188)
                      .++ .|++.||.|||+.+       |+|+       +|++|||+++.             .++..|  +|||.+.+.. +
T Consensus       123 ~~~-~~i~~~l~~lH~~~i~H~di~p~nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~  198 (277)
T cd05032         123 QMA-AEIADGMAYLAAKKFVHRDLAARNCMVAEDLTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW--MAPESLKDGV-F  198 (277)
T ss_pred             HHH-HHHHHHHHHHHhCCccccccChheEEEcCCCCEEECCcccchhhccCcccccCCCCCccccc--cCHHHHhcCC-C
Confidence            455 79999999999988       6665       59999997542             234568  9999987655 8


Q ss_pred             CchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         141 GVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       141 ~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.++|+|||||++||+++ |++||.+.+..+....+..
T Consensus       199 ~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~  236 (277)
T cd05032         199 TTKSDVWSFGVVLWEMATLAEQPYQGLSNEEVLKFVID  236 (277)
T ss_pred             CcccchHHHHHHHHHhhccCCCCCccCCHHHHHHHHhc
Confidence            999999999999999998 9999988776666655543

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The InsR subfamily is composed of InsR, Insulin-like Growth Factor-1 Receptor (IGF-1R), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR and IGF-1R are receptor tyr kinases (RTKs) composed of two alphabeta heterodimers. Binding of the ligand (insulin, IGF-1, or IGF-2) to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological

>cd05033 PTKc_EphR Catalytic domain of Ephrin Receptor Protein Tyrosine Kinases

Probab=99.92  E-value=5.8e-24  Score=163.91  Aligned_cols=151  Identities=16%  Similarity=0.216  Sum_probs=118.9

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      ....+++.+|+.++++++||||+++++.+        .++...++++||+.+++|..+.         ..+..++ .|++
T Consensus        46 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~iv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~-~~l~  116 (266)
T cd05033          46 DKQRLDFLTEASIMGQFDHPNIIRLEGVV--------TKSRPVMIITEYMENGSLDKFLRENDGKFTVGQLVGML-RGIA  116 (266)
T ss_pred             hHHHHHHHHHHHHHHhCCCCCcceEeEEE--------ecCCceEEEEEcCCCCCHHHHHHhccCCCCHHHHHHHH-HHHH
Confidence            34456788999999999999999999975        4456789999999999988762         3345566 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      .||.|||+++       |.|+       +|++|||++...             ++..|  +|||.+.+.. ++.++|+||
T Consensus       117 ~~l~~Lh~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--~~Pe~~~~~~-~~~~~Dv~s  193 (266)
T cd05033         117 SGMKYLSEMNYVHRDLAARNILVNSNLVCKVSDFGLSRRLEDSEATYTTKGGKIPIRW--TAPEAIAYRK-FTSASDVWS  193 (266)
T ss_pred             HHHHHHHhCCcccCCCCcceEEEcCCCCEEECccchhhcccccccceeccCCCCCccc--cChhhhccCC-CccccchHH
Confidence            9999999988       5665       599999986533             13468  9999987755 899999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         149 VGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       149 lG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +|+++|++++ |..||......+....+.+....|.+..+
T Consensus       194 lG~~l~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  233 (266)
T cd05033         194 FGIVMWEVMSYGERPYWDMSNQDVIKAVEDGYRLPPPMDC  233 (266)
T ss_pred             HHHHHHHHHccCCCCCCCCCHHHHHHHHHcCCCCCCCCCC
Confidence            9999999997 99999877776666666655444544443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). They can be classified into two classes (EphA and EphB), according to their extracellular sequences, which largely correspond to binding preferences for either GPI-anchored ephrin-A ligands or transmembrane ephrin-B ligands. Vertebrates have ten EphA and six EhpB receptors, which display promiscuous ligand interactions within each class. EphRs contain an ephrin binding domain and two fibronectin repeats extracellularly, a transmembrane segment

>cd06644 STKc_STK10_LOK Catalytic domain of the Protein Serine/Threonine Kinase, STK10 or Lymphocyte-oriented kinase

Probab=99.92  E-value=5e-24  Score=166.55  Aligned_cols=160  Identities=17%  Similarity=0.209  Sum_probs=119.8

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    +..++|.+........+.+.+|+++++.++||||+++++.+        ..+...+++|||+.++++
T Consensus        25 ~g~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l   96 (292)
T cd06644          25 FGKVYKAKNKETGALAAAKVIETKSEEELEDYMVEIEILATCNHPYIVKLLGAF--------YWDGKLWIMIEFCPGGAV   96 (292)
T ss_pred             CeEEEEEEECCCCceEEEEEeccCCHHHHHHHHHHHHHHHhCCCCcEeeeEEEE--------EeCCeEEEEEecCCCCcH
Confidence            677776 22    22223333333445567788999999999999999999975        345678999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      ...         ...+..++ .|++.||.|||+.+       |.|+       +||+|||++.           ..++..
T Consensus        97 ~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  175 (292)
T cd06644          97 DAIMLELDRGLTEPQIQVIC-RQMLEALQYLHSMKIIHRDLKAGNVLLTLDGDIKLADFGVSAKNVKTLQRRDSFIGTPY  175 (292)
T ss_pred             HHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhcCCeeecCCCcceEEEcCCCCEEEccCccceeccccccccceecCCcc
Confidence            754         23455566 79999999999988       5555       6999999753           235678


Q ss_pred             ccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         126 CTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       126 y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      |  +|||.+..    ...++.++|+||+||++|+|++|.+||...+......++
T Consensus       176 y--~aPE~~~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  227 (292)
T cd06644         176 W--MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKI  227 (292)
T ss_pred             c--cCceeeccccccCCCCCchhhhHhHHHHHHHHhcCCCCCccccHHHHHHHH
Confidence            9  99999852    223788999999999999999999999776654444343

Serine/threonine kinases (STKs), STK10 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK10 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Other names for STK10 include lymphocyte-oriented kinase (LOK) and Xenopus polo-like kinase kinase 1 (xPlkk1). STK10 is highly expressed in lymphocytes and is responsible in regulating leukocyte function associated antigen (LFA-1)-mediated lymphocyte adhesion. It plays a role in regulating the CD28 responsive element in T cells, and may also function as a regulator of polo-like kinase 1 (Plk1), a protein which is overexpressed in multiple tumor types.

>cd05036 PTKc_ALK_LTK Catalytic domain of the Protein Tyrosine Kinases, Anaplastic Lymphoma Kinase and Leukocyte Tyrosine Kinase

Probab=99.92  E-value=5.6e-24  Score=165.11  Aligned_cols=137  Identities=15%  Similarity=0.332  Sum_probs=108.6

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------------HHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------------SHLRYLEN   91 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------------~~~~~~~~   91 (188)
                      ....+.+|+.++++++|+||+++++++        .+....++++||+.++++..+.               ..+..++ 
T Consensus        52 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~g~~L~~~i~~~~~~~~~~~~~~~~~~~~~~-  122 (277)
T cd05036          52 DESDFLMEALIMSKFNHQNIVRLIGVS--------FERLPRFILLELMAGGDLKSFLRENRPRPERPSSLTMKDLLFCA-  122 (277)
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEE--------ccCCCcEEEEecCCCCCHHHHHHHhCCCCCCCCCCCHHHHHHHH-
Confidence            345688999999999999999999975        3345679999999999998753               2234456 


Q ss_pred             HHHHHHHHHHhhcC-------CCCe----------EEEecCCccccc-------------ccccccCCCCccccccCCCC
Q psy7174          92 QQILEGLQALKSSM-------PALL----------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYG  141 (188)
Q Consensus        92 ~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~  141 (188)
                      .|++.||.|||+++       |+|+          +|++|||+++..             .+..|  +|||++.+.. ++
T Consensus       123 ~qi~~~l~~LH~~~ivH~dlkp~nil~~~~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~  199 (277)
T cd05036         123 RDVAKGCKYLEENHFIHRDIAARNCLLTCKGPGRVAKIADFGMARDIYRASYYRKGGRAMLPIKW--MPPEAFLDGI-FT  199 (277)
T ss_pred             HHHHHHHHHHHHCCEeecccchheEEEeccCCCcceEeccCccccccCCccceecCCCCCccHhh--CCHHHHhcCC-cC
Confidence            79999999999998       4444          589999986532             12358  9999997765 89


Q ss_pred             chhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         142 VGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       142 ~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      .++|||||||++|+|++ |..||.+.+..+....+
T Consensus       200 ~~~DiwslG~il~el~~~g~~pf~~~~~~~~~~~~  234 (277)
T cd05036         200 SKTDVWSFGVLLWEIFSLGYMPYPGRTNQEVMEFV  234 (277)
T ss_pred             chhHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence            99999999999999996 99999876655544333

Protein Tyrosine Kinase (PTK) family; Anaplastic Lymphoma Kinase (ALK) and Leukocyte Tyrosine (tyr) Kinase (LTK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyr residues in protein substrates. ALK and LTK are orphan receptor tyr kinases (RTKs) whose ligands are not yet well-defined. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. They are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. ALK appears to play an important role in mammalian neural development as well

>cd05075 PTKc_Axl Catalytic domain of the Protein Tyrosine Kinase, Axl

Probab=99.92  E-value=9e-24  Score=163.13  Aligned_cols=147  Identities=15%  Similarity=0.213  Sum_probs=111.9

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------HHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------SHLRYL   89 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------~~~~~~   89 (188)
                      .....+.+.+|+++++.++||||+++++++.....  .......++++||+.++++..+.              ..+..+
T Consensus        40 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~--~~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~  117 (272)
T cd05075          40 TRSEMEDFLSEAVCMKEFDHPNVMRLIGVCLQTVE--SEGYPSPVVILPFMKHGDLHSFLLYSRLGDCPQYLPTQMLVKF  117 (272)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCcceEEEEEccCCc--ccCCCCcEEEEEeCCCCcHHHHHHHhcccCCcccCCHHHHHHH
Confidence            34456778999999999999999999997633211  11223578999999999987642              234556


Q ss_pred             HHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCc
Q psy7174          90 ENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGV  142 (188)
Q Consensus        90 ~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~  142 (188)
                      + .|++.||.|||+++       |+|+       +|++|||++...             ++..|  ++||...+.. ++.
T Consensus       118 ~-~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-~~~  193 (272)
T cd05075         118 M-TDIASGMEYLSSKSFIHRDLAARNCMLNENMNVCVADFGLSKKIYNGDYYRQGRIAKMPVKW--IAIESLADRV-YTT  193 (272)
T ss_pred             H-HHHHHHHHHHHHCCeeccccchhheEEcCCCCEEECCCCcccccCcccceecCCcccCCccc--CCHHHccCCC-cCh
Confidence            6 79999999999988       6666       599999986521             23467  8999987755 899


Q ss_pred             hhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         143 GIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       143 ~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      ++|+||+||++|++++ |++||.+....+....+.
T Consensus       194 ~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  228 (272)
T cd05075         194 KSDVWSFGVTMWEIATRGQTPYPGVENSEIYDYLR  228 (272)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            9999999999999998 899998766655444443

Protein Tyrosine Kinase (PTK) family; Axl; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl is widely expressed in a variety of organs and cells including epithelial, mesenchymal, hematopoietic, as well as non-transfor

>cd05066 PTKc_EphR_A Catalytic domain of the Protein Tyrosine Kinases, Class EphA Ephrin Receptors

Probab=99.92  E-value=5.7e-24  Score=164.16  Aligned_cols=168  Identities=16%  Similarity=0.171  Sum_probs=125.5

Q ss_pred             cccccc-cC----Cc---ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QS----KW---SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~----~~---~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..    +.   .++|.++.. .....+.+.+|+.++++++||||+++++++        .++...++++||++
T Consensus        17 ~g~v~~~~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~   88 (267)
T cd05066          17 FGEVCSGRLKLPGKREIPVAIKTLKAGYTEKQRRDFLSEASIMGQFDHPNIIHLEGVV--------TKSKPVMIVTEYME   88 (267)
T ss_pred             CCceEEEEEecCCCCceEEEEEECCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEE--------ecCCccEEEEEcCC
Confidence            677776 11    11   224444332 234456789999999999999999999975        34567899999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-----------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-----------  121 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-----------  121 (188)
                      ++++..+.         ..+..++ .|++.||.|||+.+       |+|+       +|++|||++...           
T Consensus        89 ~~~L~~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~i~h~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~  167 (267)
T cd05066          89 NGSLDAFLRKHDGQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEAAYTTR  167 (267)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCEeehhhchhcEEECCCCeEEeCCCCcccccccccceeeecC
Confidence            99988763         2345566 79999999999988       6666       589999976422           


Q ss_pred             ---ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         122 ---CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       122 ---~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                         ++..|  +|||.+.+.. ++.++|+||+||++|++++ |..||.+.+..+....+.+..+.|.+
T Consensus       168 ~~~~~~~y--~~pe~~~~~~-~~~~~Dv~slG~~l~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~  231 (267)
T cd05066         168 GGKIPIRW--TAPEAIAYRK-FTSASDVWSYGIVMWEVMSYGERPYWEMSNQDVIKAIEEGYRLPAP  231 (267)
T ss_pred             CCccceee--cCHhHhccCc-cCchhhhHHHHHHHHHHhcCCCCCcccCCHHHHHHHHhCCCcCCCC
Confidence               12358  8999997755 8999999999999999886 99999887766666666655444443

Protein Tyrosine Kinase (PTK) family; Ephrin Receptor (EphR) subfamily; most class EphA receptors including EphA3, EphA4, EphA5, and EphA7, but excluding EphA1, EphA2 and EphA10; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. EphRs comprise the largest subfamily of receptor tyr kinases (RTKs). In general, class EphA receptors bind GPI-anchored ephrin-A ligands. There are ten vertebrate EphA receptors (EphA1-10), which display promiscuous interactions with six ephrin-A ligands. One exception is EphA4, which also binds ephrins-B2/B3. EphRs contain an ephrin-binding domain and two fibronectin repeats extracellul

>cd05069 PTKc_Yes Catalytic domain of the Protein Tyrosine Kinase, Yes

Probab=99.92  E-value=7.3e-24  Score=162.94  Aligned_cols=140  Identities=20%  Similarity=0.339  Sum_probs=111.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|++++++++|||++++++++         .+...+++|||+.++++..+.          ..+..++ .|+++
T Consensus        44 ~~~~~~~E~~~l~~l~h~~i~~~~~~~---------~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~  113 (260)
T cd05069          44 MPEAFLQEAQIMKKLRHDKLVPLYAVV---------SEEPIYIVTEFMGKGSLLDFLKEGDGKYLKLPQLVDMA-AQIAD  113 (260)
T ss_pred             cHHHHHHHHHHHHhCCCCCeeeEEEEE---------cCCCcEEEEEcCCCCCHHHHHhhCCCCCCCHHHHHHHH-HHHHH
Confidence            346788999999999999999999873         234679999999999987653          2345566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ||.|||+.+       |+|+       +|++|||++...            ++..|  +|||...+.. ++.++|+||+|
T Consensus       114 al~~lH~~~i~H~dl~~~Nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~~Pe~~~~~~-~~~~~Di~slG  190 (260)
T cd05069         114 GMAYIERMNYIHRDLRAANILVGDNLVCKIADFGLARLIEDNEYTARQGAKFPIKW--TAPEAALYGR-FTIKSDVWSFG  190 (260)
T ss_pred             HHHHHHhCCEeecccCcceEEEcCCCeEEECCCccceEccCCcccccCCCccchhh--CCHHHhccCC-cChHHHHHHHH
Confidence            999999988       5555       599999986422            23458  9999887655 89999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHhhc
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      +++|++++ |+.||.+..+.+....+....
T Consensus       191 ~~l~el~t~g~~p~~~~~~~~~~~~~~~~~  220 (260)
T cd05069         191 ILLTELVTKGRVPYPGMVNREVLEQVERGY  220 (260)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHcCC
Confidence            99999998 899998877766666555443

Protein Tyrosine Kinase (PTK) family; Yes kinase; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pathways that regulate cytokine an

>cd07866 STKc_BUR1 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Bypass UAS Requirement 1 and similar proteins

Probab=99.92  E-value=3.8e-24  Score=168.09  Aligned_cols=157  Identities=32%  Similarity=0.607  Sum_probs=122.6

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      ..+.+|+++++.++||||+++++++.+............++++||+.+.....+        +..+..++ .|+++||.|
T Consensus        52 ~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~lv~~~~~~~l~~~~~~~~~~~~~~~~~~i~-~~l~~al~~  130 (311)
T cd07866          52 ITALREIKILKKLKHPNVVPLIDMAVERPDKSKRKRGSVYMVTPYMDHDLSGLLENPSVKLTESQIKCYM-LQLLEGINY  130 (311)
T ss_pred             hhHHHHHHHHHhcCCCCccchhhheecccccccccCceEEEEEecCCcCHHHHHhccccCCCHHHHHHHH-HHHHHHHHH
Confidence            467899999999999999999997654332222344567999999876544332        34566677 899999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCcccc----------------------cccccccCCCCccccccCCCCchh
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGRH----------------------VCTLYCTRGAPELLFGARMYGVGI  144 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~~----------------------~~~~~y~~~aPe~~~~~~~~~~~~  144 (188)
                      ||+.+       |+|+       +|++|||++..                      .++..|  +|||.+.+...++.++
T Consensus       131 lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~  208 (311)
T cd07866         131 LHENHILHRDIKAANILIDNQGILKIADFGLARPYDGPPPNPKGGGGGGTRKYTNLVVTRWY--RPPELLLGERRYTTAV  208 (311)
T ss_pred             HHhCCeecCCCCHHHEEECCCCCEEECcCccchhccCCCcccccCCcccccccccceeccCc--CChHHhhCCCccCchh
Confidence            99988       4454       69999997542                      235568  9999987654588999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         145 DMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       145 DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |+||+||++|+|++|++||.+.+.......+....+.|.+..||
T Consensus       209 Dv~slG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (311)
T cd07866         209 DIWGIGCVFAEMFTRRPILQGKSDIDQLHLIFKLCGTPTEETWP  252 (311)
T ss_pred             HhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhch
Confidence            99999999999999999999999988888888887777666554

Serine/Threonine Kinases (STKs), Bypass UAS Requirement 1 (BUR1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The BUR1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. BUR1, also called SGV1, is a yeast Cyclin-Dependent protein Kinase (CDK) that is functionally equivalent to mammalian CDK9. It associates with the cyclin BUR2. BUR genes were orginally identified in a genetic

>cd05058 PTKc_Met_Ron Catalytic domain of the Protein Tyrosine Kinases, Met and Ron

Probab=99.92  E-value=7.6e-24  Score=162.71  Aligned_cols=160  Identities=19%  Similarity=0.242  Sum_probs=116.8

Q ss_pred             cccccc-c---C-Ccccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q---S-KWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~---~-~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .   . .....+++|+.    .....+.+.+|+.+++.++||||+++++++.       ..+...++++||+.
T Consensus         8 ~g~v~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~-------~~~~~~~lv~e~~~   80 (262)
T cd05058           8 FGCVYHGTLIDSDGQKIHCAVKSLNRITDLEEVEQFLKEGIIMKDFSHPNVLSLLGICL-------PSEGSPLVVLPYMK   80 (262)
T ss_pred             CceEEEEEEecCCCceEEEEEEecCccCCHHHHHHHHHHHHHHccCCCCCcceEEEEee-------cCCCCcEEEEecCC
Confidence            678886 1   1 11123444443    2334567889999999999999999999642       23456789999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------  120 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------  120 (188)
                      ++++..+.         ..+..++ .|+++||.|||+.+       |+|+       +|++|||++..            
T Consensus        81 ~~~L~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dlk~~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~  159 (262)
T cd05058          81 HGDLRNFIRSETHNPTVKDLIGFG-LQVAKGMEYLASKKFVHRDLAARNCMLDESFTVKVADFGLARDIYDKEYYSVHNH  159 (262)
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCccccccCcceEEEcCCCcEEECCccccccccCCcceeeccc
Confidence            99998762         2344555 69999999999988       5665       59999998642            


Q ss_pred             ---cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         121 ---VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       121 ---~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                         .++..|  +|||.+.... ++.++|||||||++||+++ |.+||...+..+....+
T Consensus       160 ~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~~l~el~~~~~~~~~~~~~~~~~~~~  215 (262)
T cd05058         160 TGAKLPVKW--MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVDSFDITVYL  215 (262)
T ss_pred             ccCcCCccc--cChhHhccCc-cchHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHH
Confidence               124468  9999987755 8999999999999999998 57778765554433333

Protein Tyrosine Kinase (PTK) family; Met and Ron; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Met and Ron are receptor tyr kinases (RTKs) composed of an alpha-beta heterodimer. The extracellular alpha chain is disulfide linked to the beta chain, which contains an extracellular ligand-binding region with a sema domain, a PSI domain and four IPT repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Met binds to the ligand, hepatocyte growth factor/scatter factor (HGF/SF), and is also ca

>cd07864 STKc_CDK12 Catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 12

Probab=99.92  E-value=5.1e-24  Score=166.97  Aligned_cols=157  Identities=29%  Similarity=0.509  Sum_probs=120.8

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCC--CCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQP--TTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~--~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ..+.+|++++++++||||+++++++......  ........++++||+.++.+...        ...+..++ .|++.||
T Consensus        51 ~~~~~e~~~~~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~i~-~qi~~aL  129 (302)
T cd07864          51 ITAIREIKILRQLNHRNIVNLKEIVTDKQDALDFKKDKGAFYLVFEYMDHDLMGLLESGLVHFSEDHIKSFM-KQLLEGL  129 (302)
T ss_pred             HHHHHHHHHHHhCCCCCeeeeeheecCcchhhhccccCCcEEEEEcccCccHHHHHhcCCCCCCHHHHHHHH-HHHHHHH
Confidence            4677899999999999999999976332100  01123478999999987444332        34566677 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCcccc------------cccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRH------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      .|||+.+       |.|+       +|++|||++..            .++..|  +|||.+.+...++.++|+||+||+
T Consensus       130 ~~LH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~~~~~~~Di~slG~~  207 (302)
T cd07864         130 NYCHKKNFLHRDIKCSNILLNNKGQIKLADFGLARLYNSEESRPYTNKVITLWY--RPPELLLGEERYGPAIDVWSCGCI  207 (302)
T ss_pred             HHHHhCCeecCCCCHHHEEECCCCcEEeCcccccccccCCcccccccceeccCc--cChHHhcCCCCCCchhHHHHHHHH
Confidence            9999988       3343       69999997542            235568  999988654447899999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ++++++|++||...+..+.+..+.+..+.|.+..||
T Consensus       208 ~~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  243 (302)
T cd07864         208 LGELFTKKPIFQANQELAQLELISRLCGSPCPAVWP  243 (302)
T ss_pred             HHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            999999999999988888888888888887776664

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 12 (CDK12) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK12 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK12 is also called Cdc2-related protein kinase 7 (CRK7) or Cdc2-related kinase arginine/serine-rich (CrkRS). It is a unique CDK that contains an arginine/serine-rich (RS) domain, which is predominantly found in splicing factors. CDK12 is widely

>cd05034 PTKc_Src_like Catalytic domain of Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=7e-24  Score=162.83  Aligned_cols=148  Identities=20%  Similarity=0.320  Sum_probs=119.1

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+++.+|++++++++||||+++++++        ..+...++++|++.++++..+.          ..+..++ .|++.
T Consensus        44 ~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~-~~i~~  114 (261)
T cd05034          44 SPEAFLQEAQIMKKLRHDKLVQLYAVC--------SEEEPIYIVTEYMSKGSLLDFLKSGEGKKLRLPQLVDMA-AQIAE  114 (261)
T ss_pred             CHHHHHHHHHHHhhCCCCCEeeeeeee--------ecCCceEEEEeccCCCCHHHHHhccccCCCCHHHHHHHH-HHHHH
Confidence            346789999999999999999999974        3456789999999999987752          3455666 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      |+.|||+++       |+|+       +|++|||++...            ++..|  +|||.+.+.. ++.++|+||+|
T Consensus       115 al~~lh~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Di~slG  191 (261)
T cd05034         115 GMAYLESRNYIHRDLAARNILVGENLVCKIADFGLARLIEDDEYTAREGAKFPIKW--TAPEAANYGR-FTIKSDVWSFG  191 (261)
T ss_pred             HHHHHHhCCcccCCcchheEEEcCCCCEEECccccceeccchhhhhhhccCCCccc--cCHHHhccCC-cCchhHHHHHH
Confidence            999999998       5555       599999986532            23468  9999987655 89999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                      ++++++++ |+.||.+.+....+..+......|.+..
T Consensus       192 ~il~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  228 (261)
T cd05034         192 ILLTEIVTYGRVPYPGMTNREVLEQVERGYRMPRPPN  228 (261)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence            99999998 9999988887777777766655554443

Protein Tyrosine Kinase (PTK) family; Src kinase subfamily; catalytic (c) domain. Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, and Yes. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Src (or c-Src) proteins are cytoplasmic (or non-receptor) tyr kinases which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-t

>cd06645 STKc_MAP4K3 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 3

Probab=99.92  E-value=2.7e-24  Score=165.80  Aligned_cols=153  Identities=20%  Similarity=0.193  Sum_probs=116.4

Q ss_pred             cccccc-----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||.     +++..++|.++.........+.+|+.+++.++||||+++++.+        ..+...++++||+.+++|
T Consensus        22 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~e~~~~~~l~h~~ii~~~~~~--------~~~~~~~lv~e~~~~~~L   93 (267)
T cd06645          22 YGDVYKARNVNTGELAAIKVIKLEPGEDFAVVQQEIIMMKDCKHSNIVAYFGSY--------LRRDKLWICMEFCGGGSL   93 (267)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCeeeEEEEE--------EeCCEEEEEEeccCCCcH
Confidence            667776     1222234433332333445678899999999999999999975        456778999999999999


Q ss_pred             HHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          80 ARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        80 ~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      ..+        +..+..++ .|++.||.|||+.+       |+|+       +|++|||++.           ..|+..|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  172 (267)
T cd06645          94 QDIYHVTGPLSESQIAYVS-RETLQGLYYLHSKGKMHRDIKGANILLTDNGHVKLADFGVSAQITATIAKRKSFIGTPYW  172 (267)
T ss_pred             HHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEECcceeeeEccCcccccccccCcccc
Confidence            875        34566677 89999999999988       4454       6999999753           3567889


Q ss_pred             cCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         127 TRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       127 ~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                        +|||.+..  ...++.++|+||+||++|++++|.+||....+
T Consensus       173 --~aPE~~~~~~~~~~~~~~DvwSlG~il~~l~~~~~p~~~~~~  214 (267)
T cd06645         173 --MAPEVAAVERKGGYNQLCDIWAVGITAIELAELQPPMFDLHP  214 (267)
T ss_pred             --cChhhhccccCCCCCchhhhHHHHHHHHHHhcCCCCcccccc
Confidence              99999742  22378899999999999999999999865543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd08221 STKc_Nek9 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 9

Probab=99.92  E-value=7.2e-24  Score=162.32  Aligned_cols=142  Identities=23%  Similarity=0.292  Sum_probs=115.7

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQ   93 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~q   93 (188)
                      ......++.+|++++++++|+||+++++++        .++...++++||++++++..+.          ..+..++ .|
T Consensus        39 ~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~~~~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~  109 (256)
T cd08221          39 SEKERRDALNEIVILSLLQHPNIIAYYNHF--------MDDNTLLIEMEYANGGTLYDKIVRQKGQLFEEEMVLWYL-FQ  109 (256)
T ss_pred             chhHHHHHHHHHHHHHhCCCCCeeEEEeEE--------ecCCeEEEEEEecCCCcHHHHHHhccccCCCHHHHHHHH-HH
Confidence            345556788999999999999999999986        4456789999999999998753          2345566 79


Q ss_pred             HHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          94 ILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        94 i~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ++.||.|||+.+       |+|+       +|++|||++.           ..++..|  .|||.+.+.. ++.++|+||
T Consensus       110 l~~~l~~lh~~~i~h~dl~p~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~y--~ape~~~~~~-~~~~~Dv~s  186 (256)
T cd08221         110 IVSAVSYIHKAGILHRDIKTLNIFLTKAGLIKLGDFGISKILGSEYSMAETVVGTPYY--MSPELCQGVK-YNFKSDIWA  186 (256)
T ss_pred             HHHHHHHHHhCCccccCCChHhEEEeCCCCEEECcCcceEEcccccccccccCCCccc--cCHhhcCCCC-CCCcchhHH
Confidence            999999999987       5555       5999999743           3467789  9999987755 788999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         149 VGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +|+++++|++|..||.+.+..+....+..
T Consensus       187 lG~i~~~l~~g~~~~~~~~~~~~~~~~~~  215 (256)
T cd08221         187 LGCVLYELLTLKRTFDATNPLNLVVKIVQ  215 (256)
T ss_pred             HHHHHHHHHHCCCCCCCCCHHHHHHHHHc
Confidence            99999999999999988776666655543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 9 (Nek9) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek9 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek9, also called Nercc1, is primarily a cytoplasmic protein but can also localize in the nucleus. It is involved in modulating chromosome alignment and splitting during mitosis. It interacts with the gamma-tubulin ring complex and the Ran GTPase, and is implicated in microtubule organization. Nek9 associa

>cd05111 PTK_HER3 Pseudokinase domain of the Protein Tyrosine Kinase, HER3

Probab=99.92  E-value=8.1e-24  Score=164.52  Aligned_cols=137  Identities=17%  Similarity=0.147  Sum_probs=108.7

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~g   97 (188)
                      ...++..|+.++++++||||+++++++         .+...++++||+++|++..+.         ..+..++ .|++.|
T Consensus        52 ~~~~~~~~~~~l~~l~h~~iv~~~~~~---------~~~~~~~i~e~~~~gsL~~~l~~~~~~~~~~~~~~i~-~qi~~~  121 (279)
T cd05111          52 TFQEITDHMLAMGSLDHAYIVRLLGIC---------PGASLQLVTQLSPLGSLLDHVRQHRDSLDPQRLLNWC-VQIAKG  121 (279)
T ss_pred             HHHHHHHHHHHHhcCCCCCcceEEEEE---------CCCccEEEEEeCCCCcHHHHHHhcccCCCHHHHHHHH-HHHHHH
Confidence            345677888899999999999999974         234578999999999998763         2345566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      |.|||+.+       |+|+       +|++|||++..             .++..|  +|||.+.+.. ++.++|+||||
T Consensus       122 l~~lH~~~iiH~dlkp~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~~pE~~~~~~-~~~~~Dv~slG  198 (279)
T cd05111         122 MYYLEEHRMVHRNLAARNILLKSDSIVQIADFGVADLLYPDDKKYFYSEHKTPIKW--MALESILFGR-YTHQSDVWSYG  198 (279)
T ss_pred             HHHHHHCCEeccccCcceEEEcCCCcEEEcCCccceeccCCCcccccCCCCCcccc--cCHHHhccCC-cCchhhHHHHH
Confidence            99999988       5665       59999998642             234568  9999997755 89999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      |++||+++ |..||.+.........+.
T Consensus       199 ~il~el~t~g~~p~~~~~~~~~~~~~~  225 (279)
T cd05111         199 VTVWEMMSYGAEPYAGMRPHEVPDLLE  225 (279)
T ss_pred             HHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            99999998 999998876655444443

Protein Tyrosine Kinase (PTK) family; HER3 (ErbB3); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER3 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr r

>cd05609 STKc_MAST Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine kinase

Probab=99.92  E-value=6.5e-24  Score=167.02  Aligned_cols=161  Identities=16%  Similarity=0.172  Sum_probs=123.3

Q ss_pred             cccccc-cC----Ccccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .+    +..++|.+.+.   .....+.+.+|+++++.++||||+++++.+        ..+...++++||+.+
T Consensus        14 ~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~g   85 (305)
T cd05609          14 YGAVYLVRHKETRQRFAMKKINKQNLILRNQIQQVFVERDILTFAENPFVVSMFCSF--------ETKRHLCMVMEYVEG   85 (305)
T ss_pred             CeeEEEEEECCCCcEEEEEEeehhhhhhHHHHHHHHHHHHHHHhCCCCCeeeeEEEE--------ecCCEEEEEEecCCC
Confidence            677776 22    22334444332   123445778999999999999999999975        445678999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------------
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------------  120 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------  120 (188)
                      +++..+.        ..+..++ .|++.||.|||+.+       |.|+       +|++|||+++.              
T Consensus        86 ~~L~~~l~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dl~p~NIll~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  164 (305)
T cd05609          86 GDCATLLKNIGALPVDMARMYF-AETVLALEYLHNYGIVHRDLKPDNLLITSMGHIKLTDFGLSKIGLMSLTTNLYEGHI  164 (305)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCchHHEEECCCCCEEEeeCCCccccCcCcccccccccc
Confidence            9998763        3345566 79999999999988       5555       69999997541              


Q ss_pred             ------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         121 ------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       121 ------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                                  .++..|  +|||.+.+.. ++.++|+||+||++|++++|..||.+.+..+....+..
T Consensus       165 ~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~vl~el~~g~~pf~~~~~~~~~~~~~~  230 (305)
T cd05609         165 EKDTREFLDKQVCGTPEY--IAPEVILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVIS  230 (305)
T ss_pred             ccchhhccccCCccCccc--cCchhccCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence                        345678  9999987755 89999999999999999999999988777666665544

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. There are four mammalian MAST kinases, named MAST1-MAST4. MAST1 is also referred to as syntrophin-associated STK (SAST), while MAST2 is also called MAST205. MAST kinases are cytoskeletal associated kinases of unknown function that a

>cd07850 STKc_JNK Catalytic domain of the Serine/Threonine Kinase, c-Jun N-terminal Kinase

Probab=99.92  E-value=3.2e-24  Score=172.16  Aligned_cols=153  Identities=29%  Similarity=0.507  Sum_probs=119.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----HHHHHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----~~~~~~~~~~qi~~gl~~  100 (188)
                      ...+++.+|++++++++||||++++++|....  ...+....++++||+.+.....+     ...+..++ .|++.||.|
T Consensus        57 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~lv~e~~~~~l~~~~~~~l~~~~~~~~~-~ql~~aL~~  133 (353)
T cd07850          57 THAKRAYRELVLMKLVNHKNIIGLLNVFTPQK--SLEEFQDVYLVMELMDANLCQVIQMDLDHERMSYLL-YQMLCGIKH  133 (353)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcceeeeeccCC--CccccCcEEEEEeccCCCHHHHHhhcCCHHHHHHHH-HHHHHHHHH
Confidence            34456788999999999999999999863211  11223457999999976433332     34456666 899999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCcccc----------cccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGRH----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~~----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                      ||+++       |+|+       +|++|||++..          .++..|  +|||.+.+.. ++.++|+||+||++|+|
T Consensus       134 LH~~gi~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~DvwslG~~l~~l  210 (353)
T cd07850         134 LHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY--RAPEVILGMG-YKENVDIWSVGCIMGEM  210 (353)
T ss_pred             HHhCCeeeCCCCHHHEEECCCCCEEEccCccceeCCCCCCCCCCcccccc--cCHHHHhCCC-CCCchhhHhHHHHHHHH
Confidence            99988       4444       69999998652          356678  9999998755 89999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ++|+.||.+.+.......+...++.|++
T Consensus       211 ~~g~~pf~~~~~~~~~~~~~~~~~~~~~  238 (353)
T cd07850         211 IRGTVLFPGTDHIDQWNKIIEQLGTPSD  238 (353)
T ss_pred             HHCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence            9999999998888888888777776653

Serine/Threonine Kinases (STKs), c-Jun N-terminal kinase (JNK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The JNK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. JNKs are mitogen-activated protein kinases (MAPKs) that are involved in many stress-activated responses including those during inflammation, neurodegeneration, apoptosis, and persistent pain sensitization, among others. They are also essential regulators of physiological and pathological processes and are involved in the pathogenesis of several diseases such as diabetes, atherosclerosis, stroke, Parkinson's and Alzheimer's. Vetebrates harbor three different JNK

>cd05087 PTKc_Aatyk1_Aatyk3 Catalytic domain of the Protein Tyrosine Kinases, Apoptosis-associated tyrosine kinases 1 and 3

Probab=99.92  E-value=1e-23  Score=162.87  Aligned_cols=157  Identities=19%  Similarity=0.170  Sum_probs=115.2

Q ss_pred             ccccccc---CCcc-cccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQQ---SKWS-PNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~~---~~~~-~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+.   +... ..+++|+.    .......+.+|+.++++++||||+++++++        .+....++++||+++
T Consensus         8 ~g~Vy~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~   79 (269)
T cd05087           8 FGKVILGEVNSGYTPAQVVVKELRVSASVQEQMKFLEEAQPYRSLQHSNLLQCLGQC--------TEVTPYLLVMEFCPL   79 (269)
T ss_pred             CceEEEEEEcCCCCceEEEEEecCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------cCCCCcEEEEECCCC
Confidence            7888871   2221 13334432    223345788999999999999999999975        345668999999999


Q ss_pred             ccHHHHHH-------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          77 TTKARFYS-------------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        77 ~~l~~~~~-------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      |++..+..             .+..++ .|++.||.|||+.+       |+|+       +|++|||++.          
T Consensus        80 g~L~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~i~H~dlkp~nil~~~~~~~kL~dfg~~~~~~~~~~~~~  158 (269)
T cd05087          80 GDLKGYLRSCRKAELMTPDPTTLQRMA-CEIALGLLHLHKNNFIHSDLALRNCLLTADLTVKIGDYGLSHNKYKEDYYVT  158 (269)
T ss_pred             CcHHHHHHHhhhcccccccHHHHHHHH-HHHHHHHHHHHHCCEeccccCcceEEEcCCCcEEECCccccccccCcceeec
Confidence            99977532             233455 79999999999988       6665       5999999753          


Q ss_pred             ---ccccccccCCCCccccccC------CCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q psy7174         120 ---HVCTLYCTRGAPELLFGAR------MYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQL  172 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~~~------~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~  172 (188)
                         ..++..|  +|||++.+..      .++.++|+||+|+++||+++ |..||....+.+..
T Consensus       159 ~~~~~~~~~y--~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~  219 (269)
T cd05087         159 PDQLWVPLRW--IAPELVDEVHGNLLVVDQTKESNVWSLGVTIWELFELGSQPYRHLSDEQVL  219 (269)
T ss_pred             CCCcCCcccc--cCHhHhccccccccccCCCccchhHHHHHHHHHHHhCCCCCCCCCChHHHH
Confidence               2245568  9999985421      25789999999999999996 99999776554443

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 1 (Aatyk1) and Aatyk3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk1 and Aatyk3 are members of the Aatyk subfamily of proteins. Aatyk3 is a receptor kinase containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk1 has a similar domain arrangement but without the transmembrane segment and is thus, a cytoplasmic (or nonreceptor) kinase. The expression of Aatyk1 (also referred simply as Aatyk) is upregulated during growth arrest and apoptosis in myeloid cells

>cd05083 PTKc_Chk Catalytic domain of the Protein Tyrosine Kinase, Csk homologous kinase

Probab=99.92  E-value=9.7e-24  Score=161.63  Aligned_cols=163  Identities=17%  Similarity=0.215  Sum_probs=119.6

Q ss_pred             cccccccCCccccccccccc-hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARCD-VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY   83 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~~-~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~   83 (188)
                      ||.||+.......+++|... ....+.+.+|+.++++++||||+++++++.         ....++++||+.++++..+.
T Consensus        19 ~g~v~~~~~~~~~~~iK~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~---------~~~~~~v~e~~~~~~L~~~l   89 (254)
T cd05083          19 FGAVLQGEYTGQKVAVKNIKCDVTAQAFLEETAVMTKLHHKNLVRLLGVIL---------HNGLYIVMELMSKGNLVNFL   89 (254)
T ss_pred             CCceEecccCCCceEEEeecCcchHHHHHHHHHHHHhCCCCCcCeEEEEEc---------CCCcEEEEECCCCCCHHHHH
Confidence            57777621111133344321 123467889999999999999999999741         23479999999999987752


Q ss_pred             ----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------cccccccCCCC
Q psy7174          84 ----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------VCTLYCTRGAP  131 (188)
Q Consensus        84 ----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------~~~~~y~~~aP  131 (188)
                                ..+..++ .|++.||.|||+.+       |+|+       +|++|||++..        ..+..|  +||
T Consensus        90 ~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~~~H~dl~p~nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~y--~~p  166 (254)
T cd05083          90 RTRGRALVSVIQLLQFS-LDVAEGMEYLESKKLVHRDLAARNILVSEDGVAKVSDFGLARVGSMGVDNSKLPVKW--TAP  166 (254)
T ss_pred             HhcCcCCCCHHHHHHHH-HHHHHHHHHHHhCCeeccccCcceEEEcCCCcEEECCCccceeccccCCCCCCCcee--cCH
Confidence                      2344455 79999999999988       5555       69999997652        223468  899


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      |.+.+.. ++.++|+||+|+++|++++ |++||.+.+..+....+.+...
T Consensus       167 e~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~  215 (254)
T cd05083         167 EALKHKK-FSSKSDVWSYGVLLWEVFSYGRAPYPKMSLKEVKECVEKGYR  215 (254)
T ss_pred             HHhccCC-cCchhhHHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhCCCC
Confidence            9987655 8999999999999999997 9999988776665555544433

Protein Tyrosine Kinase (PTK) family; Csk homologous kinase (Chk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. Chk is also referred to as megakaryocyte-associated tyrosine kinase (Matk). To inhibit Src kinases, Chk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Chk inhibit Src ki

>cd05041 PTKc_Fes_like Catalytic domain of Fes-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.1e-23  Score=160.86  Aligned_cols=162  Identities=19%  Similarity=0.234  Sum_probs=121.7

Q ss_pred             cccccc--c--CCccccccccccc-hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ--Q--SKWSPNTPMARCD-VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~--~--~~~~~~~~i~~~~-~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|.||.  .  ++..++|.++... .+..+.+.+|++++++++||||+++++++        .+....++++||+.++++
T Consensus         8 ~g~v~~~~~~~~~~v~~K~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~l   79 (251)
T cd05041           8 FGDVYKGVLKGNTEVAVKTCRSTLPPDLKRKFLQEAEILKQYDHPNIVKLIGVC--------VQKQPIYIVMELVPGGSL   79 (251)
T ss_pred             CceEEEEEEeCCCcEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCeEEEEEEE--------ecCCCeEEEEEcCCCCcH
Confidence            677887  2  2333344443332 23567889999999999999999999975        455678999999999988


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccccc-------------c
Q psy7174          80 ARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHVC-------------T  123 (188)
Q Consensus        80 ~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~~-------------~  123 (188)
                      ..+.         ..+..++ .|++.||.|||+++       |+|+       +|++|||++....             +
T Consensus        80 ~~~l~~~~~~~~~~~~~~~~-~~~~~~l~~lH~~~i~h~di~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~  158 (251)
T cd05041          80 LTFLRKKKNRLTVKKLLQMS-LDAAAGMEYLESKNCIHRDLAARNCLVGENNVLKISDFGMSREEEGGIYTVSDGLKQIP  158 (251)
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCEehhhcCcceEEEcCCCcEEEeeccccccccCCcceeccccCcce
Confidence            7652         2344555 79999999999988       6666       5999999764221             2


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ..|  +|||.+.+.. ++.++|+||+|+++|++++ |..||.+.........+...
T Consensus       159 ~~y--~~PE~~~~~~-~~~~~Di~slG~i~~~l~t~~~~p~~~~~~~~~~~~~~~~  211 (251)
T cd05041         159 IKW--TAPEALNYGR-YTSESDVWSYGILLWETFSLGDTPYPGMSNQQTRERIESG  211 (251)
T ss_pred             ecc--CChHhhccCC-CCcchhHHHHHHHHHHHHhccCCCCccCCHHHHHHHHhcC
Confidence            348  9999987655 8999999999999999998 88999877665555554433

Protein Tyrosine Kinase (PTK) family; Fes subfamily; catalytic (c) domain. Fes subfamily members include Fes (or Fps), Fer, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Fes subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal region with FCH (Fes/Fer/CIP4 homology) and coiled-coil domains, followed by a SH2 domain, and a C-terminal catalytic domain. The genes for Fes (feline sarcoma) and Fps (Fujinami poultry sarcoma) were first isolated from tumor-causing retroviruses. The viral oncogenes encode chimeric Fes proteins consisting of Gag sequences at the N-termini, resulting in unregulated tyr k

>cd05080 PTKc_Tyk2_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Tyrosine kinase 2

Probab=99.92  E-value=5.2e-24  Score=165.66  Aligned_cols=130  Identities=21%  Similarity=0.262  Sum_probs=105.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGL   98 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl   98 (188)
                      ...+.+.+|++++++++||||+++++++.+      ......+++|||+.++++..+       +..+..++ .|++.||
T Consensus        48 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~~~l~~~~~~~~l~~~~~~~i~-~~l~~~l  120 (283)
T cd05080          48 QNTSGWKKEINILKTLYHENIVKYKGCCSE------QGGKGLQLIMEYVPLGSLRDYLPKHKLNLAQLLLFA-QQICEGM  120 (283)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCCceEEEEecCCCCCCHHHHHHHcCCCHHHHHHHH-HHHHHHH
Confidence            345678899999999999999999997522      234567999999999999875       34556666 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .|||+++       |+|+       +|++|||++...              ++..|  +|||.+.+.. ++.++|+||||
T Consensus       121 ~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~--~~PE~~~~~~-~~~~~Di~slG  197 (283)
T cd05080         121 AYLHSQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW--YAVECLKENK-FSYASDVWSFG  197 (283)
T ss_pred             HHHHHCCeeccccChheEEEcCCCcEEEeecccccccCCcchhhccCCCCCCCcee--eCHhHhcccC-CCcccccHHHH
Confidence            9999988       6665       599999986522              23457  8999987654 89999999999


Q ss_pred             HHHHHHHhCCCCCCC
Q psy7174         151 CIICELLLKAPFLPG  165 (188)
Q Consensus       151 ~il~el~~g~~pf~~  165 (188)
                      +++++|++|..|+..
T Consensus       198 ~~l~el~tg~~p~~~  212 (283)
T cd05080         198 VTLYELLTHCDSKQS  212 (283)
T ss_pred             HHHHHHHhCCCCCCC
Confidence            999999999988753

Protein Tyrosine Kinase (PTK) family; Tyrosine kinase 2 (Tyk2); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyk2 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of sign

>PTZ00284 protein kinase; Provisional

Probab=99.92  E-value=3.3e-24  Score=178.20  Aligned_cols=167  Identities=20%  Similarity=0.226  Sum_probs=121.3

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCC------CeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYA------NIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~------niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .    +++.++|.+++. ........+|+++++.++|.      ++++++++|.       .+....++++|+
T Consensus       142 fg~V~~a~~~~~~~~vAvK~i~~~-~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~i~~~~~-------~~~~~~~iv~~~  213 (467)
T PTZ00284        142 FGKVVEAWDRKRKEYCAVKIVRNV-PKYTRDAKIEIQFMEKVRQADPADRFPLMKIQRYFQ-------NETGHMCIVMPK  213 (467)
T ss_pred             CEEEEEEEEcCCCeEEEEEEEecc-hhhHHHHHHHHHHHHHHhhcCcccCcceeeeEEEEE-------cCCceEEEEEec
Confidence            677887 2    223344444321 23334567788888877654      5788888752       223568899998


Q ss_pred             cccccHHHH-------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-----------------------EEEecC
Q psy7174          74 FTKTTKARF-------YSHLRYLENQQILEGLQALKSS-M-------PALL-----------------------KKFVGI  115 (188)
Q Consensus        74 ~~~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-----------------------lkl~df  115 (188)
                      +.+..+..+       ...+..++ .|++.||+|||+. +       |+||                       +||+||
T Consensus       214 ~g~~l~~~l~~~~~l~~~~~~~i~-~qi~~aL~yLH~~~gIiHrDlKP~NILl~~~~~~~~~~~~~~~~~~~~~vkl~Df  292 (467)
T PTZ00284        214 YGPCLLDWIMKHGPFSHRHLAQII-FQTGVALDYFHTELHLMHTDLKPENILMETSDTVVDPVTNRALPPDPCRVRICDL  292 (467)
T ss_pred             cCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhcCCeecCCCCHHHEEEecCCcccccccccccCCCCceEEECCC
Confidence            854443332       23456677 8999999999974 6       4443                       689999


Q ss_pred             Cccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         116 GIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       116 g~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      |.+.        ..||..|  +|||++.+.. |+.++|||||||++|||++|++||.+.++.+.+..+.+.++.++
T Consensus       293 G~~~~~~~~~~~~~gt~~Y--~APE~~~~~~-~~~~~DiwSlGvil~elltG~~pf~~~~~~~~~~~i~~~~g~~p  365 (467)
T PTZ00284        293 GGCCDERHSRTAIVSTRHY--RSPEVVLGLG-WMYSTDMWSMGCIIYELYTGKLLYDTHDNLEHLHLMEKTLGRLP  365 (467)
T ss_pred             CccccCccccccccCCccc--cCcHHhhcCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHcCCCC
Confidence            9643        5688999  9999998865 99999999999999999999999999988888888877776553

>cd05067 PTKc_Lck_Blk Catalytic domain of the Protein Tyrosine Kinases, Lymphocyte-specific kinase and Blk

Probab=99.92  E-value=7e-24  Score=162.96  Aligned_cols=164  Identities=15%  Similarity=0.249  Sum_probs=120.5

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.+.+. ....+++.+|+.++++++||||+++++++         .+...++++|++.++++.
T Consensus        19 ~g~v~~~~~~~~~~~a~K~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~---------~~~~~~~v~e~~~~~~L~   88 (260)
T cd05067          19 FGEVWMGYYNGHTKVAIKSLKQG-SMSPEAFLAEANLMKQLQHPRLVRLYAVV---------TQEPIYIITEYMENGSLV   88 (260)
T ss_pred             cceEEeeecCCCceEEEEEecCC-CCcHHHHHHHHHHHHhcCCcCeeeEEEEE---------ccCCcEEEEEcCCCCCHH
Confidence            667776 2   222223333322 22346788999999999999999999863         245689999999999987


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      ...          ..+..++ .|++.||+|||+.+       |+|+       ++++|||++..            .++.
T Consensus        89 ~~~~~~~~~~~~~~~~~~i~-~~i~~al~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~  167 (260)
T cd05067          89 DFLKTPEGIKLTINKLIDMA-AQIAEGMAFIERKNYIHRDLRAANILVSETLCCKIADFGLARLIEDNEYTAREGAKFPI  167 (260)
T ss_pred             HHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHhcCCeecccccHHhEEEcCCCCEEEccCcceeecCCCCcccccCCcccc
Confidence            652          3344556 79999999999988       5554       69999997642            1234


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      .|  +|||.+.... ++.++|+||+|+++|++++ |++||.+.+..+....+.+....+
T Consensus       168 ~y--~~pe~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~  223 (260)
T cd05067         168 KW--TAPEAINYGT-FTIKSDVWSFGILLTEIVTYGRIPYPGMTNPEVIQNLERGYRMP  223 (260)
T ss_pred             cc--cCHHHhccCC-cCcccchHHHHHHHHHHHhCCCCCCCCCChHHHHHHHHcCCCCC
Confidence            68  9999987655 8899999999999999998 999998777666555554444333

Protein Tyrosine Kinase (PTK) family; Lck and Blk kinases; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Lck (lymphocyte-specific kinase) and Blk are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Sr

>cd05088 PTKc_Tie2 Catalytic domain of the Protein Tyrosine Kinase, Tie2

Probab=99.92  E-value=5.9e-24  Score=167.27  Aligned_cols=139  Identities=17%  Similarity=0.193  Sum_probs=110.8

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ...+.+.+|++++.++ +||||+++++++        ..+...++++||++++++..+..                    
T Consensus        49 ~~~~~~~~Ei~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  120 (303)
T cd05088          49 DDHRDFAGELEVLCKLGHHPNIINLLGAC--------EHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTAST  120 (303)
T ss_pred             HHHHHHHHHHHHHHHhcCCCCcceEEEEE--------CCCCCceEEEEeCCCCcHHHHHHhcccccccccccccccccCc
Confidence            4456788999999999 899999999975        44567899999999999876531                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc----------cccccccCCCCccccc
Q psy7174          85 ----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH----------VCTLYCTRGAPELLFG  136 (188)
Q Consensus        85 ----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~----------~~~~~y~~~aPe~~~~  136 (188)
                          .+..++ .|++.|++|||+.+       |+|+       +|++|||++..          .++..|  +|||.+.+
T Consensus       121 l~~~~~~~~~-~qi~~al~~LH~~gi~H~dlkp~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y--~aPE~~~~  197 (303)
T cd05088         121 LSSQQLLHFA-ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRW--MAIESLNY  197 (303)
T ss_pred             CCHHHHHHHH-HHHHHHHHHHHhCCccccccchheEEecCCCcEEeCccccCcccchhhhcccCCCcccc--cCHHHHhc
Confidence                344556 79999999999988       6666       58999998641          123458  99999876


Q ss_pred             cCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         137 ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       137 ~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      .. ++.++|+||+||++|++++ |.+||.+.+..+....+.
T Consensus       198 ~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~  237 (303)
T cd05088         198 SV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLP  237 (303)
T ss_pred             cC-CcccccchhhhhHHHHHHhcCCCCcccCChHHHHHHHh
Confidence            55 8899999999999999998 999998766655554443

Protein Tyrosine Kinase (PTK) family; Tie2; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie2 is a receptor tyr kinase (RTK) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie2 is expressed mainly in endothelial cells and hematopoietic stem cells. It is also found in a subset of tumor-associated monocytes and eosinophils. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2. The binding of A

>cd06628 STKc_MAPKKK_Byr2_like Catalytic domain of fungal Byr2-like MAP Kinase Kinase Kinases

Probab=99.92  E-value=6.3e-24  Score=163.59  Aligned_cols=137  Identities=25%  Similarity=0.384  Sum_probs=110.4

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl~~  100 (188)
                      +.+.+|+.++++++||||+++++++        .+....++++||++++++..+.        ..+..++ .|++.||.|
T Consensus        51 ~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~l~~~l~~  121 (267)
T cd06628          51 DALAREIALLKELQHENIVQYLGSS--------LDADHLNIFLEYVPGGSVAALLNNYGAFEETLVRNFV-RQILKGLNY  121 (267)
T ss_pred             HHHHHHHHHHHhcCCCCeeeEEEEE--------EeCCccEEEEEecCCCCHHHHHHhccCccHHHHHHHH-HHHHHHHHH
Confidence            5678999999999999999999975        4456889999999999987652        3455566 799999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCccc-----------------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGR-----------------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~-----------------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      ||+.+       |+|+       +|++|||.+.                 ..++..|  +|||.+.+.. ++.++|+||+
T Consensus       122 lH~~~ivH~di~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~y--~~pe~~~~~~-~~~~~Dv~sl  198 (267)
T cd06628         122 LHNRGIIHRDIKGANILVDNKGGIKISDFGISKKLEANSLSTKTNGARPSLQGSVFW--MAPEVVKQTS-YTRKADIWSL  198 (267)
T ss_pred             HHhcCcccccCCHHHEEEcCCCCEEecccCCCcccccccccCCccccccccCCCcCc--cChhHhccCC-CCchhhhHHH
Confidence            99988       4444       6999999643                 1345678  9999987755 8899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||++|++++|+.||.+.+......++..
T Consensus       199 G~il~~l~~g~~p~~~~~~~~~~~~~~~  226 (267)
T cd06628         199 GCLVVEMLTGKHPFPDCTQLQAIFKIGE  226 (267)
T ss_pred             HHHHHHHhhCCCCCCCccHHHHHHHHhc
Confidence            9999999999999987665555444433

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Byr2-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Schizosaccharomyces pombe Byr2, Saccharomyces cerevisiae and Cryptococcus neoformans Ste11, and related proteins. They contain an N-terminal SAM (sterile alpha-motif) domain, which mediates protein-protein interaction, and a C-terminal catalytic domain. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate

>cd08228 STKc_Nek6 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 6

Probab=99.92  E-value=5.4e-24  Score=163.94  Aligned_cols=150  Identities=20%  Similarity=0.313  Sum_probs=115.0

Q ss_pred             cccccc-c----CCccccccccc---cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMAR---CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~---~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+..   ...+..+.+.+|+++++.++||||+++++++        ......++++||+.+
T Consensus        15 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~   86 (267)
T cd08228          15 FSEVYRATCLLDRKPVALKKVQIFEMMDAKARQDCVKEIDLLKQLNHPNVIKYLDSF--------IEDNELNIVLELADA   86 (267)
T ss_pred             CeeEEEEEEeCCCCEEEEEEeeccccCCHHHHHHHHHHHHHHHhCCCcceeeeeeeE--------EECCeEEEEEEecCC
Confidence            667776 2    22333443332   1334456788999999999999999999975        345678999999999


Q ss_pred             ccHHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          77 TTKARFY------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        77 ~~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      +++..+.            ..+..++ .|++.||.|||+++       |+|+       ++++|||++.           
T Consensus        87 ~~L~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~~i~H~dl~~~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~  165 (267)
T cd08228          87 GDLSQMIKYFKKQKRLIPERTVWKYF-VQLCSAVEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS  165 (267)
T ss_pred             CcHHHHHHHhhhccCCCCHHHHHHHH-HHHHHHHHHHhhCCeeCCCCCHHHEEEcCCCCEEECccccceeccchhHHHhc
Confidence            9987642            2345566 79999999999988       4554       6999999754           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ..++..|  +|||.+.+.. ++.++|+||+|+++|++++|+.||...
T Consensus       166 ~~~~~~~--~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~p~~~~  209 (267)
T cd08228         166 LVGTPYY--MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             CCCCccc--cChhhhccCC-CCchhhHHHHHHHHHHHhcCCCCCccc
Confidence            3466778  9999987755 889999999999999999999998654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 is required for the transition from metaphase to anaphase. It also plays important roles in mitotic spindle formation and cytokinesis. Activated by Nek9 during mitosis, Nek6 phosphorylates Eg5, a kinesin that is important for spindle bipolarity. Nek6 localizes to spindle microtubules during metaphase

>cd05056 PTKc_FAK Catalytic domain of the Protein Tyrosine Kinase, Focal Adhesion Kinase

Probab=99.92  E-value=9.8e-24  Score=162.98  Aligned_cols=146  Identities=20%  Similarity=0.269  Sum_probs=113.9

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      .+..+.+.+|+.++++++||||+++++++         .+...++++||++++++..+.         ..+..++ .|++
T Consensus        48 ~~~~~~~~~e~~~l~~~~h~~i~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~l~  117 (270)
T cd05056          48 PSVREKFLQEAYIMRQFDHPHIVKLIGVI---------TENPVWIVMELAPLGELRSYLQVNKYSLDLASLILYS-YQLS  117 (270)
T ss_pred             HHHHHHHHHHHHHHHhCCCCchhceeEEE---------cCCCcEEEEEcCCCCcHHHHHHhCCCCCCHHHHHHHH-HHHH
Confidence            44566789999999999999999999974         234578999999999998763         3345566 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      .||+|||+.+       |+|+       +|++|||++...            ++..|  +|||.+.... ++.++|+|||
T Consensus       118 ~~l~~lH~~~~~H~dl~p~nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  194 (270)
T cd05056         118 TALAYLESKRFVHRDIAARNVLVSSPDCVKLGDFGLSRYLEDESYYKASKGKLPIKW--MAPESINFRR-FTSASDVWMF  194 (270)
T ss_pred             HHHHHHHhCCeeccccChheEEEecCCCeEEccCceeeecccccceecCCCCccccc--cChhhhccCC-CCchhhhHHH
Confidence            9999999988       6665       699999976421            22468  9999987654 8999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      |++++++++ |..||.+.+..+....+.+....+.
T Consensus       195 G~il~el~~~g~~pf~~~~~~~~~~~~~~~~~~~~  229 (270)
T cd05056         195 GVCMWEILMLGVKPFQGVKNNDVIGRIENGERLPM  229 (270)
T ss_pred             HHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCcCCC
Confidence            999999986 9999987776666555544433333

Protein Tyrosine Kinase (PTK) family; Focal Adhesion Kinase (FAK); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FAK is a cytoplasmic (or nonreceptor) tyr kinase that contains an autophosphorylation site and a FERM domain at the N-terminus, a central tyr kinase domain, proline-rich regions, and a C-terminal FAT (focal adhesion targeting) domain. FAK activity is dependent on integrin-mediated cell adhesion, which facilitates N-terminal autophosphorylation. Full activation is achieved by the phosphorylation of its two adjacent A-loop tyrosines. FAK is important in mediating signaling initiated at sites of cell adhesions

>cd06631 STKc_YSK4 Catalytic domain of the Protein Serine/Threonine Kinase, Yeast Sps1/Ste20-related kinase 4

Probab=99.92  E-value=6.4e-24  Score=163.50  Aligned_cols=137  Identities=24%  Similarity=0.364  Sum_probs=110.9

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++|+||+++++++        .++...++++||++++++..+.        ..+..++ .|++.||
T Consensus        45 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l  115 (265)
T cd06631          45 EYEKLQEEVDLLKSLKHVNIVQYLGTC--------LDDNTISIFMEFVPGGSISSILNRFGPLPEPVFCKYT-KQILDGV  115 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeEeeEe--------ecCCeEEEEEecCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHH
Confidence            345688999999999999999999975        4457889999999999988762        3455566 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCcccc-----------------cccccccCCCCccccccCCCCchhHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRH-----------------VCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~-----------------~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      +|||+.+       |.|+       +|++|||++..                 .++..|  +|||.+.+.. ++.++|+|
T Consensus       116 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-~~~~~Dv~  192 (265)
T cd06631         116 AYLHNNCVVHRDIKGNNVMLMPNGIIKLIDFGCARRLAWVGLHGTHSNMLKSMHGTPYW--MAPEVINESG-YGRKSDIW  192 (265)
T ss_pred             HHHHhCCcccCCcCHHhEEECCCCeEEeccchhhHhhhhccccccccccccccCCCccc--cChhhhcCCC-CcchhhHH
Confidence            9999988       5554       69999997532                 356678  9999997755 88999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         148 AVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       148 slG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      |+|+++|++++|..||...+.......+
T Consensus       193 slG~~~~~l~~g~~p~~~~~~~~~~~~~  220 (265)
T cd06631         193 SIGCTVFEMATGKPPLASMDRLAAMFYI  220 (265)
T ss_pred             HHHHHHHHHHhCCCccccCChHHHHHHh
Confidence            9999999999999999876654443333

Serine/threonine kinases (STKs), yeast Sps1/Ste20-related kinase 4 (YSK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The YSK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. YSK4 is a putative MAPKKK, whose mammalian gene has been isolated. MAPKKKs (MKKKs or MAP3Ks) phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals.

>cd06654 STKc_PAK1 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 1

Probab=99.92  E-value=6.7e-24  Score=166.44  Aligned_cols=155  Identities=19%  Similarity=0.240  Sum_probs=119.2

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|.||+ .    ++..++|.+........+.+.+|+.+++.++||||+++++.|        ..+...++++||+.++++
T Consensus        33 ~~~v~~~~~~~~~~~v~ik~~~~~~~~~~~~~~~e~~~l~~~~h~~v~~~~~~~--------~~~~~~~lv~e~~~~~~L  104 (296)
T cd06654          33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY--------LVGDELWVVMEYLAGGSL  104 (296)
T ss_pred             CeEEEEEEECCCCcEEEEEEEecCCcchHHHHHHHHHHHHhCCCCCEeeEEEEE--------EeCCEEEEeecccCCCCH
Confidence            466665 1    222234433333344456788999999999999999999975        345688999999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+.       ..+..++ .|++.||.|||+.+       |+|+       +|++|||++.           ..++..| 
T Consensus       105 ~~~~~~~~~~~~~~~~i~-~ql~~aL~~LH~~gi~H~dLkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y-  182 (296)
T cd06654         105 TDVVTETCMDEGQIAAVC-RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW-  182 (296)
T ss_pred             HHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEECccccchhccccccccCcccCCccc-
Confidence            8763       3455666 79999999999998       4444       6999999743           3566789 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                       +|||.+.+.. ++.++|+||+||++|++++|++||...++...
T Consensus       183 -~aPE~~~~~~-~~~~~Dv~s~Gvil~~l~~g~~pf~~~~~~~~  224 (296)
T cd06654         183 -MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRA  224 (296)
T ss_pred             -cCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCCCCCHHHh
Confidence             9999987754 78999999999999999999999977665433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 1, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK1 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05047 PTKc_Tie Catalytic domain of Tie Protein Tyrosine Kinases

Probab=99.92  E-value=9.7e-24  Score=163.20  Aligned_cols=162  Identities=15%  Similarity=0.147  Sum_probs=120.6

Q ss_pred             ccccccc-cC----C--cccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           4 VCFKPFQ-QS----K--WSPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         4 ~~g~v~~-~~----~--~~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      -||.||+ ..    .  ..++|.++.. ..+..+.+.+|+++++++ +||||+++++++        ......+++|||+
T Consensus         7 ~~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~   78 (270)
T cd05047           7 NFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC--------EHRGYLYLAIEYA   78 (270)
T ss_pred             CCceEEEEEEcCCCCeeEEEEEEccccCCHHHHHHHHHHHHHHHhhccCCCeeeEEEEE--------ecCCCceEEEEeC
Confidence            3677887 11    1  1224444432 344556788999999999 799999999986        3345689999999


Q ss_pred             ccccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCC
Q psy7174          75 TKTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIG  116 (188)
Q Consensus        75 ~~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg  116 (188)
                      +++++..+.                        ..+..++ .|++.||+|||+.+       |+|+       +|++|||
T Consensus        79 ~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~i~~al~~lH~~~i~H~dikp~nili~~~~~~kl~dfg  157 (270)
T cd05047          79 PHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA-ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFG  157 (270)
T ss_pred             CCCcHHHHHHhccccccccccccccCCcCCCCHHHHHHHH-HHHHHHHHHHHHCCEeecccccceEEEcCCCeEEECCCC
Confidence            999987653                        2345566 79999999999988       6666       5899999


Q ss_pred             cccc----------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         117 IGRH----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       117 ~~~~----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++..          ..+..|  +|||++.... ++.++|+|||||++++|++ |..||.+.+..+....+..
T Consensus       158 l~~~~~~~~~~~~~~~~~~y--~apE~~~~~~-~~~~~Di~slG~il~el~~~g~~pf~~~~~~~~~~~~~~  226 (270)
T cd05047         158 LSRGQEVYVKKTMGRLPVRW--MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ  226 (270)
T ss_pred             CccccchhhhccCCCCcccc--CChHHHccCC-CCchhhHHHHHHHHHHHHcCCCCCccccCHHHHHHHHhC
Confidence            8631          123458  9999987655 8999999999999999997 9999987665555554433

Protein Tyrosine Kinase (PTK) family; Tie subfamily; catalytic (c) domain. The Tie subfamily consists of Tie1 and Tie2. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tie proteins are receptor tyr kinases (RTKs) containing an extracellular region, a transmembrane segment, and an intracellular catalytic domain. The extracellular region contains an immunoglobulin (Ig)-like domain, three epidermal growth factor (EGF)-like domains, a second Ig-like domain, and three fibronectin type III repeats. Tie receptors are specifically expressed in endothelial cells and hematopoietic stem cells. The angiopoietins (Ang-1 to Ang-4) serve as ligands for Tie2, while no specific l

>KOG0586|consensus

Probab=99.92  E-value=3.5e-25  Score=181.24  Aligned_cols=156  Identities=16%  Similarity=0.201  Sum_probs=125.4

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      |++|+.     +...+++|.|.+.  .....++..+|+++|..++|||||+++++.        .....+|+||||+.+|
T Consensus        69 f~~V~La~~~~t~~~VaiK~idkt~ln~~~~~k~~rev~imk~l~HPnIvkl~~v~--------~t~~~lylV~eya~~g  140 (596)
T KOG0586|consen   69 FAKVKLARHILTGTEVAIKIIDKTQLNPSKRQKLGREVDIMKSLNHPNIVKLFSVI--------ETEATLYLVMEYASGG  140 (596)
T ss_pred             eEEEEeeEecCCCceEEEEEehhcccChHHHHHHHHHHHHHHhcCCcceeeeeeee--------eecceeEEEEEeccCc
Confidence            556665     3334457766663  445556789999999999999999999985        4467899999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------cccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLY  125 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~  125 (188)
                      .+.++        +...+..+ .|++.|++|||+++       .+|+       +||+|||++.          .+|++.
T Consensus       141 e~~~yl~~~gr~~e~~ar~~F-~q~vsaveYcH~k~ivHrdLk~eNilL~~~mnikIaDfgfS~~~~~~~~lqt~cgspp  219 (596)
T KOG0586|consen  141 ELFDYLVKHGRMKEKEARAKF-RQIVSAVEYCHSKNIVHRDLKAENILLDENMNIKIADFGFSTFFDYGLMLQTFCGSPP  219 (596)
T ss_pred             hhHHHHHhcccchhhhhhhhh-HHHHHHHHHHhhcceeccccchhhcccccccceeeeccccceeecccccccccCCCCC
Confidence            99886        33455666 79999999999998       3333       6999999865          678999


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                      |  .|||+..+...-++.+|+||+|+++|.+..|..||.|.+-...
T Consensus       220 y--AaPEl~~g~~y~gpe~D~Wslgvvly~LV~GsLPFDG~~lk~L  263 (596)
T KOG0586|consen  220 Y--AAPELFNGKKYDGPEVDIWSLGVVLYALVEGSLPFDGQNLKEL  263 (596)
T ss_pred             c--cChHhhcCcccCCcceehhhhhhhheeeeecccccCCcccccc
Confidence            9  9999999877557899999999999999999999987664333

>cd06613 STKc_MAP4K3_like Catalytic domain of Mitogen-activated protein kinase kinase kinase kinase-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=8e-24  Score=162.37  Aligned_cols=144  Identities=20%  Similarity=0.217  Sum_probs=113.6

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLR   87 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~   87 (188)
                      +|.+........+.+.+|++++++++||||+++++++        .++...++++||+.++++..+.         ..+.
T Consensus        33 ik~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~l~~e~~~~~~l~~~~~~~~~~l~~~~~~  104 (262)
T cd06613          33 IKVIKLEPGDDFEIIQQEISMLKECRHPNIVAYFGSY--------LRRDKLWIVMEYCGGGSLQDIYQVTRGPLSELQIA  104 (262)
T ss_pred             EEEEEcCchhhHHHHHHHHHHHHhCCCCChhceEEEE--------EeCCEEEEEEeCCCCCcHHHHHHhhccCCCHHHHH
Confidence            4433333344567889999999999999999999975        4566789999999999988752         3455


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCcccccc--CCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGA--RMY  140 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~--~~~  140 (188)
                      .++ .|++.||.|||+.+       |+|+       +|++|||++.           ..++..|  +|||.+...  ..+
T Consensus       105 ~~~-~ql~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y--~~Pe~~~~~~~~~~  181 (262)
T cd06613         105 YVC-RETLKGLAYLHETGKIHRDIKGANILLTEDGDVKLADFGVSAQLTATIAKRKSFIGTPYW--MAPEVAAVERKGGY  181 (262)
T ss_pred             HHH-HHHHHHHHHHHhCCceecCCChhhEEECCCCCEEECccccchhhhhhhhccccccCCccc--cCchhhcccccCCc
Confidence            566 79999999999988       5665       5999999754           2456678  999998664  137


Q ss_pred             CchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         141 GVGIDMWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       141 ~~~~DiwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                      +.++|+||+|+++|+|++|++||.+.++...
T Consensus       182 ~~~~Di~slG~~l~~~~tg~~p~~~~~~~~~  212 (262)
T cd06613         182 DGKCDIWALGITAIELAELQPPMFDLHPMRA  212 (262)
T ss_pred             CchhhhHHHHHHHHHHHhCCCCCCCCCHHHH
Confidence            8899999999999999999999977654443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 3 (MAPKKKK3 or MAP4K3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily includes MAP4K3, MAP4K1, MAP4K2, MAP4K5, and related proteins. Vertebrate members contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activ

>cd06640 STKc_MST4 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 4

Probab=99.92  E-value=4.9e-24  Score=165.44  Aligned_cols=154  Identities=18%  Similarity=0.216  Sum_probs=118.8

Q ss_pred             cccccc-cCCc----ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QSKW----SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~~~----~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||. .++.    .++|.++.. .....+.+.+|++++++++||||+++++++        .++...++++||+.+++
T Consensus        17 ~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   88 (277)
T cd06640          17 FGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY--------LKGTKLWIIMEYLGGGS   88 (277)
T ss_pred             CeEEEEEEEccCCEEEEEEEEeccccHHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------EECCEEEEEEecCCCCc
Confidence            677777 2222    223333322 234456788999999999999999999976        44678999999999999


Q ss_pred             HHHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          79 KARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        79 l~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      +..+.       ..+..++ .|++.||+|||+.+       |+|+       ++++|||++.           ..++..|
T Consensus        89 L~~~i~~~~l~~~~~~~~~-~~l~~~l~~lh~~~ivH~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  167 (277)
T cd06640          89 ALDLLRAGPFDEFQIATML-KEILKGLDYLHSEKKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFW  167 (277)
T ss_pred             HHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCccCcCCChhhEEEcCCCCEEEcccccceeccCCccccccccCcccc
Confidence            88752       3455566 79999999999988       5555       5999999763           2356678


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD  170 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~  170 (188)
                        +|||.+.+.. ++.++|+||+||++|+|++|.+||.+.++..
T Consensus       168 --~apE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~~~  208 (277)
T cd06640         168 --MAPEVIQQSA-YDSKADIWSLGITAIELAKGEPPNSDMHPMR  208 (277)
T ss_pred             --cCHhHhccCC-CccHHHHHHHHHHHHHHHHCCCCCCCcChHh
Confidence              9999987755 8999999999999999999999997665443

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 4 (MST4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST4 is sometimes referred to as MASK (MST3 and SOK1-related kinase). It plays a role in mitogen-activated protein kinase (MAPK) signaling during cytoskeletal rearrangement, morphogenesis, and apoptosis. It influences cell growth and transformation by modulating the extracellular signal-regulated kinase (ERK) pathway. MST4 may also play a role in tumor formation and progression. It localizes in the Golgi apparatus by inter

>cd05044 PTKc_c-ros Catalytic domain of the Protein Tyrosine Kinase, C-ros

Probab=99.92  E-value=9.6e-24  Score=162.73  Aligned_cols=147  Identities=16%  Similarity=0.292  Sum_probs=112.8

Q ss_pred             ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------
Q psy7174          17 NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------   83 (188)
Q Consensus        17 ~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------   83 (188)
                      +|.+.+. .......+.+|+++++.++||||+++++++        ..+...++++||++++++..+.            
T Consensus        31 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~  102 (269)
T cd05044          31 VKTLRKGATDQEKKEFLKEAHLMSNFNHPNIVKLLGVC--------LLNEPQYIIMELMEGGDLLSYLRDARVERFGPPL  102 (269)
T ss_pred             hhhhhcccchhhHHHHHHHHHHHHhcCCCCeeeEeeee--------cCCCCeEEEEeccCCCcHHHHHHHhhhcccCCcc
Confidence            4444332 234566788999999999999999999975        4456789999999999998753            


Q ss_pred             ---HHHHHHHHHHHHHHHHHHhhcC-------CCC------------eEEEecCCcccc-------------cccccccC
Q psy7174          84 ---SHLRYLENQQILEGLQALKSSM-------PAL------------LKKFVGIGIGRH-------------VCTLYCTR  128 (188)
Q Consensus        84 ---~~~~~~~~~qi~~gl~~lH~~~-------~~~------------ilkl~dfg~~~~-------------~~~~~y~~  128 (188)
                         ..+..++ .|++.||.|||+.+       |+|            .+|++|||++..             .++..|  
T Consensus       103 ~~~~~~~~~~-~~l~~~l~~lH~~~i~H~dl~p~nil~~~~~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--  179 (269)
T cd05044         103 LTLKELLDIC-LDVAKGCVYLEQMHFIHRDLAARNCLVSEKGYDADRVVKIGDFGLARDIYKSDYYRKEGEGLLPVRW--  179 (269)
T ss_pred             ccHHHHHHHH-HHHHHHHHHHHhCCcccCCCChheEEEecCCCCCCcceEECCcccccccccccccccCcccCCCccc--
Confidence               2234455 79999999999987       333            468999998542             224568  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      +|||.+.+.. ++.++|+|||||++|+|++ |..||...++.+....+
T Consensus       180 ~aPE~~~~~~-~~~~~Dv~slG~il~ellt~g~~p~~~~~~~~~~~~~  226 (269)
T cd05044         180 MAPESLLDGK-FTTQSDVWSFGVLMWEILTLGQQPYPALNNQEVLQHV  226 (269)
T ss_pred             cCHHHHccCC-cccchhHHHHHHHHHHHHHcCCCCCcccCHHHHHHHH
Confidence            9999998765 8999999999999999998 99999776654444433

Protein Tyrosine Kinases (PTK) family; C-ros and Drosophila Sevenless proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The proto-oncogene c-ros encodes an orphan receptor tyr kinase (RTK) with an unknown ligand. RTKs contain an extracellular ligand-binding domain, a transmembrane region, and an intracellular tyr kinase domain. RTKs are usually activated through ligand binding, which causes dimerization and autophosphorylation of the intracellular tyr kinase catalytic domain. C-ros is expressed in embryonic cells of the kidney, intestine and lung, but disappears soon after birth. It persists only in the adult epididymis. Male

>cd06655 STKc_PAK2 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 2

Probab=99.92  E-value=7.3e-24  Score=166.27  Aligned_cols=147  Identities=20%  Similarity=0.268  Sum_probs=116.6

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYL   89 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~   89 (188)
                      +|.+........+.+.+|+++++.++||||+++++.+        ..+...++++||+.++++..+       ...+..+
T Consensus        49 iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~l~~~~~~~i  120 (296)
T cd06655          49 IKQINLQKQPKKELIINEILVMKELKNPNIVNFLDSF--------LVGDELFVVMEYLAGGSLTDVVTETCMDEAQIAAV  120 (296)
T ss_pred             EEEEecccCchHHHHHHHHHHHHhcCCCceeeeeeeE--------ecCceEEEEEEecCCCcHHHHHHhcCCCHHHHHHH
Confidence            3333333344456788999999999999999999975        446688999999999999875       3445666


Q ss_pred             HHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchh
Q psy7174          90 ENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGI  144 (188)
Q Consensus        90 ~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~  144 (188)
                      + .|++.||.|||+.+       |+|+       +|++|||++.           ..++..|  +|||.+.+.. ++.++
T Consensus       121 ~-~~l~~al~~LH~~~i~H~dL~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~  196 (296)
T cd06655         121 C-RECLQALEFLHANQVIHRDIKSDNVLLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW--MAPEVVTRKA-YGPKV  196 (296)
T ss_pred             H-HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEccCccchhcccccccCCCcCCCccc--cCcchhcCCC-CCchh
Confidence            6 79999999999988       4554       6999999743           2456779  9999987755 88999


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         145 DMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       145 DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      |+||+||++|++++|+.||.+.++......+
T Consensus       197 Dv~slGvil~~lltg~~pf~~~~~~~~~~~~  227 (296)
T cd06655         197 DIWSLGIMAIEMVEGEPPYLNENPLRALYLI  227 (296)
T ss_pred             hHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            9999999999999999999887665544433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 2, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK2 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd05035 PTKc_Axl_like Catalytic Domain of Axl-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.2e-23  Score=162.32  Aligned_cols=147  Identities=14%  Similarity=0.189  Sum_probs=112.8

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------HHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------SHLRYLEN   91 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------~~~~~~~~   91 (188)
                      ...+.+.+|+++++.++||||+++++++.+..  ........++++||++++++..+.              ..+..++ 
T Consensus        43 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~-  119 (273)
T cd05035          43 SEIEEFLSEAACMKDFDHPNVMKLIGVCFEAS--SLQKIPKPMVILPFMKHGDLHSFLLYSRLGGLPEKLPLQTLLKFM-  119 (273)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeEEeeeccCC--ccccCcccEEEEeccCCCCHHHHHHHhhccCCcccCCHHHHHHHH-
Confidence            34567899999999999999999999753211  112234579999999999987652              2344556 


Q ss_pred             HHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchh
Q psy7174          92 QQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGI  144 (188)
Q Consensus        92 ~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~  144 (188)
                      .|++.||.|||+.+       |+|+       +|++|||+++..             ++..|  +|||.+.... ++.++
T Consensus       120 ~~i~~aL~~lH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-~~~~~  196 (273)
T cd05035         120 VDIALGMEYLSNRNFIHRDLAARNCMLREDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW--IAIESLADRV-YTSKS  196 (273)
T ss_pred             HHHHHHHHHHHhCCeeccccchheEEECCCCeEEECCccceeeccccccccccccccCCccc--cCHhhcccCC-CCccc
Confidence            79999999999988       6666       599999986521             23467  8999987654 89999


Q ss_pred             HHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         145 DMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       145 DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+||+||++||+++ |.+||.+.++.+.+..+...
T Consensus       197 Dv~SlG~il~el~~~g~~p~~~~~~~~~~~~~~~~  231 (273)
T cd05035         197 DVWAFGVTMWEIATRGQTPYPGVENHEIYDYLRHG  231 (273)
T ss_pred             chHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcC
Confidence            99999999999998 89999887766665555443

Protein Tyrosine Kinase (PTK) family; Axl subfamily; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). The Axl subfamily consists of Axl, Tyro3 (or Sky), Mer (or Mertk), and similar proteins. PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Axl subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Axl subfamily members are implicated in a variety of cellu

>cd06658 STKc_PAK5 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 5

Probab=99.92  E-value=3.5e-24  Score=167.80  Aligned_cols=159  Identities=18%  Similarity=0.210  Sum_probs=122.5

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .+    +..++|.++.......+.+.+|+.+++.++||||+++++.+        ..+...++++||+.++++
T Consensus        35 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~ii~~~~~~--------~~~~~~~lv~e~~~~~~L  106 (292)
T cd06658          35 TGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHENVVDMYNSY--------LVGDELWVVMEFLEGGAL  106 (292)
T ss_pred             CeEEEEEEECCCCCEEEEEEEecchHHHHHHHHHHHHHHHhCCCCcHHHHHHhe--------ecCCeEEEEEeCCCCCcH
Confidence            567776 22    22234433333344556788999999999999999999965        456788999999999998


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       ...+..++ .|++.||+|||+.+       |+|+       +|++|||++.           ..++..| 
T Consensus       107 ~~~~~~~~l~~~~~~~~~-~qi~~~l~~LH~~~ivH~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y-  184 (292)
T cd06658         107 TDIVTHTRMNEEQIATVC-LSVLRALSYLHNQGVIHRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKSLVGTPYW-  184 (292)
T ss_pred             HHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCEEEccCcchhhcccccccCceeecCccc-
Confidence            875       34556666 79999999999988       4444       6999999753           3467789 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                       +|||.+.+.. ++.++|+||+|+++||+++|..||.+.+....+..+
T Consensus       185 -~aPE~~~~~~-~~~~~Dv~slGvil~el~~g~~p~~~~~~~~~~~~~  230 (292)
T cd06658         185 -MAPEVISRLP-YGTEVDIWSLGIMVIEMIDGEPPYFNEPPLQAMRRI  230 (292)
T ss_pred             -cCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence             9999987755 899999999999999999999999877665554444

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 5, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK5 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK5 is mainly express

>cd06642 STKc_STK25-YSK1 Catalytic domain of the Protein Serine/Threonine Kinase, STK25 or Yeast Sps1/Ste20-related kinase 1

Probab=99.92  E-value=3.8e-24  Score=165.94  Aligned_cols=152  Identities=18%  Similarity=0.204  Sum_probs=117.6

Q ss_pred             cccccc-cC----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ ..    +..++|.++.. .....+.+.+|++++++++||||+++++++        ..+...++++||+.+++
T Consensus        17 ~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   88 (277)
T cd06642          17 FGEVYKGIDNRTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYITRYYGSY--------LKGTKLWIIMEYLGGGS   88 (277)
T ss_pred             CeeEEEEEEcCCCeEEEEEEeccccchHHHHHHHHHHHHHHcCCCCccHhhhccc--------ccCCceEEEEEccCCCc
Confidence            677777 22    22234433322 233456788999999999999999999975        45667899999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          79 KARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        79 l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      +..+       ...+..++ .|++.|+.|||+.+       |+|+       +|++|||++.           ..++..|
T Consensus        89 L~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~ivH~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  167 (277)
T cd06642          89 ALDLLKPGPLEETYIATIL-REILKGLDYLHSERKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFW  167 (277)
T ss_pred             HHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhcCCeeccCCChheEEEeCCCCEEEccccccccccCcchhhhcccCcccc
Confidence            8775       34455666 79999999999988       5555       6999999754           2356778


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                        +|||.+.+.. ++.++|+||+||+++++++|++|+....+
T Consensus       168 --~aPE~~~~~~-~~~~~Dv~slG~il~el~tg~~p~~~~~~  206 (277)
T cd06642         168 --MAPEVIKQSA-YDFKADIWSLGITAIELAKGEPPNSDLHP  206 (277)
T ss_pred             --cCHHHhCcCC-CchhhhHHHHHHHHHHHHhCCCCCcccch
Confidence              9999997755 89999999999999999999999865443

Serine/threonine kinases (STKs), STK25 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The STK25 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. STK25 is also called Ste20/oxidant stress response kinase 1 (SOK1) or yeast Sps1/Ste20-related kinase 1 (YSK1). STK25 is localized in the Golgi apparatus through its interaction with the Golgi matrix protein GM130. It may play a role in the regulation of cell migration and polarization. STK25 binds and phosphorylates CCM3 (cerebral cavernous malformation 3), also called PCD10 (programmed cell death 10), and may play a role in apoptosis. Human STK25

>PHA03207 serine/threonine kinase US3; Provisional

Probab=99.92  E-value=2.9e-24  Score=174.90  Aligned_cols=140  Identities=19%  Similarity=0.223  Sum_probs=109.9

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQAL  101 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~~l  101 (188)
                      ....+|++++++++||||+++++++        ..+...+++||++.+..+..+       ...+..++ .|++.||.||
T Consensus       131 ~~~~~E~~il~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~l~~~l~~~~~l~~~~~~~i~-~ql~~aL~~L  201 (392)
T PHA03207        131 KTPGREIDILKTISHRAIINLIHAY--------RWKSTVCMVMPKYKCDLFTYVDRSGPLPLEQAITIQ-RRLLEALAYL  201 (392)
T ss_pred             ccHHHHHHHHHhcCCCCccceeeeE--------eeCCEEEEEehhcCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHH
Confidence            3457899999999999999999975        345678999999875443332       23456666 7999999999


Q ss_pred             hhcC-------CCCe-------EEEecCCccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174         102 KSSM-------PALL-------KKFVGIGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       102 H~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      |+.+       |+|+       +||+|||++.             ..||..|  +|||++.... |+.++||||+||++|
T Consensus       202 H~~givHrDlkp~Nill~~~~~~~l~DfG~a~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DvwslGvil~  278 (392)
T PHA03207        202 HGRGIIHRDVKTENIFLDEPENAVLGDFGAACKLDAHPDTPQCYGWSGTLET--NSPELLALDP-YCAKTDIWSAGLVLF  278 (392)
T ss_pred             HHCCccccCCCHHHEEEcCCCCEEEccCccccccCcccccccccccccccCc--cCHhHhcCCC-CCchhhHHHHHHHHH
Confidence            9998       5555       6999999753             3578889  9999998765 899999999999999


Q ss_pred             HHHhCCCCCCCCC---hHHHHHHHHhhcC
Q psy7174         155 ELLLKAPFLPGES---DLDQLTRIFQTLG  180 (188)
Q Consensus       155 el~~g~~pf~~~~---~~~~~~~i~~~~~  180 (188)
                      ||++|+.||.+..   ....+..+.+.++
T Consensus       279 el~~g~~pf~~~~~~~~~~~l~~i~~~~~  307 (392)
T PHA03207        279 EMSVKNVTLFGKQVKSSSSQLRSIIRCMQ  307 (392)
T ss_pred             HHHHCCCCCCCCCCCCcHHHHHHHHHHhc
Confidence            9999999997754   3445555555443

>cd05060 PTKc_Syk_like Catalytic domain of Spleen Tyrosine Kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=1.2e-23  Score=161.38  Aligned_cols=140  Identities=17%  Similarity=0.225  Sum_probs=110.9

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+++.+|++++++++||||+++++++         .....++++||+.++++..+.        ..+..++ .|++.|
T Consensus        38 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~---------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~  107 (257)
T cd05060          38 AGKKEFLREASVMAQLDHPCIVRLIGVC---------KGEPLMLVMELAPLGPLLKYLKKRREIPVSDLKELA-HQVAMG  107 (257)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEE---------cCCceEEEEEeCCCCcHHHHHHhCCCCCHHHHHHHH-HHHHHH
Confidence            3456788999999999999999999974         234679999999999988752        3455666 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCccccccCCCCchhHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      |.|||+.+       |+|+       +|++|||++...              ++..|  +|||.+.+.. ++.++|+|||
T Consensus       108 l~~lh~~~i~H~di~p~nili~~~~~~kl~df~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  184 (257)
T cd05060         108 MAYLESKHFVHRDLAARNVLLVNRHQAKISDFGMSRALGAGSDYYRATTAGRWPLKW--YAPECINYGK-FSSKSDVWSY  184 (257)
T ss_pred             HHHHhhcCeeccCcccceEEEcCCCcEEeccccccceeecCCcccccccCccccccc--cCHHHhcCCC-CCccchHHHH
Confidence            99999988       6665       599999975421              12358  8999987655 8999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ||++|++++ |.+||...+..+....+.+.
T Consensus       185 G~~l~~~~~~g~~p~~~~~~~~~~~~~~~~  214 (257)
T cd05060         185 GVTLWEAFSYGAKPYGEMKGAEVIAMLESG  214 (257)
T ss_pred             HHHHHHHHcCCCCCcccCCHHHHHHHHHcC
Confidence            999999997 99999876665555444433

Protein Tyrosine Kinase (PTK) family; Spleen Tyrosine Kinase (Syk) subfamily; catalytic (c) domain. The Syk subfamily is composed of Syk, ZAP-70, Shark, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Syk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing two Src homology 2 (SH2) domains N-terminal to the catalytic tyr kinase domain. They are involved in the signaling downstream of activated receptors (including B-cell, T-cell, and Fc receptors) that contain ITAMs (immunoreceptor tyr activation motifs), leading to processes such as cell proliferation, differentiation, survival, adhesion, mi

>cd05039 PTKc_Csk_like Catalytic domain of C-terminal Src kinase-like Protein Tyrosine Kinases

Probab=99.92  E-value=2e-23  Score=160.00  Aligned_cols=159  Identities=16%  Similarity=0.216  Sum_probs=120.4

Q ss_pred             ccccccc---cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           4 VCFKPFQ---QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         4 ~~g~v~~---~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      .+|.||+   .++..++|.++... ...+++.+|+.+++.++|+||+++++++        .++...++++|+++++++.
T Consensus        18 ~~g~v~~~~~~~~~v~iK~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~   88 (256)
T cd05039          18 EFGDVMLGDYRGQKVAVKCLKDDS-TAAQAFLAEASVMTTLRHPNLVQLLGVV--------LQGNPLYIVTEYMAKGSLV   88 (256)
T ss_pred             CCceEEEEEecCcEEEEEEeccch-hHHHHHHHHHHHHHhcCCcceeeeEEEE--------cCCCCeEEEEEecCCCcHH
Confidence            3677887   22223344333322 2467889999999999999999999975        3366789999999999988


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc--------ccccccC
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV--------CTLYCTR  128 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~--------~~~~y~~  128 (188)
                      .+.          ..+..++ .|++.||.|||+.+       |+|+       +|++|||.+...        .+..|  
T Consensus        89 ~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lh~~~i~H~di~p~Nili~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~--  165 (256)
T cd05039          89 DYLRSRGRAVITLAQQLGFA-LDVCEGMEYLEEKNFVHRDLAARNVLVSEDLVAKVSDFGLAKEASQGQDSGKLPVKW--  165 (256)
T ss_pred             HHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCccchhcccceEEEeCCCCEEEcccccccccccccccCCCcccc--
Confidence            763          3455566 79999999999998       6665       599999976532        23458  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      +|||.+.... ++.++|+||+|++++++++ |..||...+..+....+
T Consensus       166 ~ape~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~  212 (256)
T cd05039         166 TAPEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPHV  212 (256)
T ss_pred             cCchhhcCCc-CCcHHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHH
Confidence            8999987654 8899999999999999997 99999777655544443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk) subfamily; catalytic (c) domain. The Csk subfamily is composed of Csk, Chk, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk and Chk are translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk

>cd05082 PTKc_Csk Catalytic domain of the Protein Tyrosine Kinase, C-terminal Src kinase

Probab=99.92  E-value=9.6e-24  Score=161.85  Aligned_cols=139  Identities=19%  Similarity=0.278  Sum_probs=110.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|+.++++++|+|++++++++.       ..+...++++||+.++++..+.          ..+..++ .|++.
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~i~~  113 (256)
T cd05082          42 TAQAFLAEASVMTQLRHSNLVQLLGVIV-------EEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFS-LDVCE  113 (256)
T ss_pred             hHHHHHHHHHHHHhCCCCCeeeEEEEEE-------cCCCceEEEEECCCCCcHHHHHHhcCCCCCCHHHHHHHH-HHHHH
Confidence            3456889999999999999999998642       2345689999999999988752          2345566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc--------ccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV--------CTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~--------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      ||.|||+++       |+|+       +|++|||++...        ++..|  +|||.+.... ++.++|+||+||++|
T Consensus       114 ~l~~lH~~~i~H~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~slG~i~~  190 (256)
T cd05082         114 AMEYLEANNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW--TAPEALREKK-FSTKSDVWSFGILLW  190 (256)
T ss_pred             HHHHHHhCCEeccccchheEEEcCCCcEEecCCccceeccccCCCCccceee--cCHHHHccCC-CCchhhhHHHHHHHH
Confidence            999999988       6666       599999986532        23468  9999987654 889999999999999


Q ss_pred             HHHh-CCCCCCCCChHHHHHHHH
Q psy7174         155 ELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       155 el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      +|++ |+.||...+..+....+.
T Consensus       191 ~l~~~g~~p~~~~~~~~~~~~~~  213 (256)
T cd05082         191 EIYSFGRVPYPRIPLKDVVPRVE  213 (256)
T ss_pred             HHHhCCCCCCCCCCHHHHHHHHh
Confidence            9997 999998766655544443

Protein Tyrosine Kinase (PTK) family; C-terminal Src kinase (Csk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The Csk subfamily kinases are cytoplasmic (or nonreceptor) tyr kinases containing the Src homology domains, SH3 and SH2, N-terminal to the catalytic tyr kinase domain. They negatively regulate the activity of Src kinases that are anchored to the plasma membrane. To inhibit Src kinases, Csk is translocated to the membrane via binding to specific transmembrane proteins, G-proteins, or adaptor proteins near the membrane. Csk catalyzes the tyr phosphorylation of the regulatory C-terminal tail of Src kinases, re

>cd07847 STKc_CDKL1_4 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 1 and 4

Probab=99.92  E-value=6.7e-24  Score=164.87  Aligned_cols=140  Identities=28%  Similarity=0.451  Sum_probs=114.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++|||++++++++        ..+...++++||+.++++..+        +..+..++ .|++.||
T Consensus        43 ~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~ql~~~l  113 (286)
T cd07847          43 IKKIALREIRMLKQLKHPNLVNLIEVF--------RRKRKLHLVFEYCDHTVLNELEKNPRGVPEHLIKKII-WQTLQAV  113 (286)
T ss_pred             ccHHHHHHHHHHHhCCCCCEeeeeeEE--------eeCCEEEEEEeccCccHHHHHHhCCCCCCHHHHHHHH-HHHHHHH
Confidence            345678999999999999999999975        445678999999999888765        23466666 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      .|||+.+       |.|+       +|++|||++..           .++..|  +|||.+.+...++.++|+||+|+++
T Consensus       114 ~~LH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~~~~~~~Di~slG~i~  191 (286)
T cd07847         114 NFCHKHNCIHRDVKPENILITKQGQIKLCDFGFARILTGPGDDYTDYVATRWY--RAPELLVGDTQYGPPVDVWAIGCVF  191 (286)
T ss_pred             HHHHHCCceecCCChhhEEEcCCCcEEECccccceecCCCcccccCccccccc--CCHHHHhCCCCcCchhhhHHHHHHH
Confidence            9999987       5555       69999998642           345678  9999987644588999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |+|++|.+||.+.+..+.+..+.+
T Consensus       192 ~~l~~g~~p~~~~~~~~~~~~~~~  215 (286)
T cd07847         192 AELLTGQPLWPGKSDVDQLYLIRK  215 (286)
T ss_pred             HHHHhCCCCCCCCChHHHHHHHHH
Confidence            999999999998877666665544

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 1 (CDKL1) and CDKL4 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL1 and CDKL4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL1, also called p42 KKIALRE, is a glial protein that is upregulated in gliosis. It is present in neuroblastoma and A431 human carcinoma cells, and may be implicated in neoplastic transformation. The functio

>cd07849 STKc_ERK1_2_like Catalytic domain of Extracellular signal-Regulated Kinase 1 and 2-like Serine/Threonine Kinases

Probab=99.92  E-value=3e-24  Score=171.20  Aligned_cols=152  Identities=34%  Similarity=0.570  Sum_probs=117.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~   99 (188)
                      ....+.+|+.++++++||||+++++++...   ........++++||+.+ ++...       +..+..++ .|+++||.
T Consensus        46 ~~~~~~~E~~~l~~l~h~niv~~~~~~~~~---~~~~~~~~~lv~e~~~~-~l~~~~~~~~l~~~~~~~i~-~ql~~aL~  120 (336)
T cd07849          46 FCQRTLREIKILRRFKHENIIGILDIIRPP---SFESFNDVYIVQELMET-DLYKLIKTQHLSNDHIQYFL-YQILRGLK  120 (336)
T ss_pred             hHHHHHHHHHHHHhCCCCCcCchhheeecc---cccccceEEEEehhccc-CHHHHHhcCCCCHHHHHHHH-HHHHHHHH
Confidence            445678899999999999999999875221   22233467999999976 44432       34566677 79999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc--------------ccccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR--------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      |||+.+       |+|+       +|++|||++.              ..++..|  +|||.+.+...++.++|+||+||
T Consensus       121 ~LH~~~ivH~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~DvwslGv  198 (336)
T cd07849         121 YIHSANVLHRDLKPSNLLLNTNCDLKICDFGLARIADPEHDHTGFLTEYVATRWY--RAPEIMLNSKGYTKAIDIWSVGC  198 (336)
T ss_pred             HHHhCCeeccCCCHHHEEECCCCCEEECcccceeeccccccccCCcCCcCcCCCc--cChHHhhCCCCCCcHHHHHHHHH
Confidence            999998       4454       6999999753              2456779  99998765445889999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         152 IICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       152 il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      ++|+|++|++||.+.+.......+...++.|+++
T Consensus       199 il~el~~G~~~f~~~~~~~~~~~~~~~~~~~~~~  232 (336)
T cd07849         199 ILAEMLSNRPLFPGKDYLHQLNLILGVLGTPSQE  232 (336)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCHH
Confidence            9999999999999888777777777766665543

Serine/Threonine Kinases (STKs), Extracellular signal-regulated kinases 1 and 2 (ERK1/2) and Fus3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. This ERK1/2-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the mitogen-activated protein kinases (MAPKs) ERK1, ERK2, baker's yeast Fus3, and similar proteins. MAPK pathways are important mediators of cellular responses to extracellular signals. ERK1/2 activation is preferentially by mitogenic factors, differentiation stimuli, and cytokines, through a kinase cascade involving the MAPK kinases MEK1/2 and a MAPK kinase

>cd08227 PK_STRAD_alpha Pseudokinase domain of STE20-related kinase adapter protein alpha

Probab=99.92  E-value=6.2e-24  Score=168.81  Aligned_cols=133  Identities=17%  Similarity=0.228  Sum_probs=105.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQIL   95 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~   95 (188)
                      ...+.+.+|+++++.++||||++++++|        ..+...++++||+.++++..+.          ..+..++ .|++
T Consensus        41 ~~~~~~~~e~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~l~~~~~~~i~-~qi~  111 (327)
T cd08227          41 EMVTFLQGELHVSKLFNHPNIVPYRATF--------IADNELWVVTSFMAYGSAKDLICTHFMDGMSELAIAYIL-QGVL  111 (327)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEE--------EECCEEEEEEeccCCCcHHHHHHhhccCCCCHHHHHHHH-HHHH
Confidence            3445678899999999999999999986        4456789999999999987652          3455666 8999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccc------------------ccccccccCCCCcccccc-CCCCc
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGR------------------HVCTLYCTRGAPELLFGA-RMYGV  142 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~~-~~~~~  142 (188)
                      .||+|||+++       |+|+       ++++||+...                  ..++..|  +|||++.+. ..++.
T Consensus       112 ~~L~~LH~~~iiH~dlkp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~  189 (327)
T cd08227         112 KALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMINHGQRLRVVHDFPKYSVKVLPW--LSPEVLQQNLQGYDA  189 (327)
T ss_pred             HHHHHHHHCCEecCCCChhhEEEecCCcEEEcccchhhccccccccccccccccccccceecc--cChHHhhcccCCCCc
Confidence            9999999988       6676       4788886421                  1234568  999998753 24889


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         143 GIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       143 ~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                      ++||||+||++|++++|+.||...+..
T Consensus       190 ~~DiwslG~il~el~~g~~pf~~~~~~  216 (327)
T cd08227         190 KSDIYSVGITACELANGHVPFKDMPAT  216 (327)
T ss_pred             hhhHHHHHHHHHHHHHCCCCCCCcchh
Confidence            999999999999999999999765443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) alpha subfamily, pseudokinase domain. The STRAD alpha subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hype

>cd06615 PKc_MEK Catalytic domain of the dual-specificity Protein Kinase, MAP/ERK Kinase

Probab=99.92  E-value=5.7e-24  Score=167.71  Aligned_cols=132  Identities=20%  Similarity=0.277  Sum_probs=108.9

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ....++.+|++++++++||||++++++|        ..+...++++||+.+++|..+.        ..+..++ .|+++|
T Consensus        41 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~ey~~~~~L~~~l~~~~~~~~~~~~~~~-~~i~~~  111 (308)
T cd06615          41 AIRNQIIRELKVLHECNSPYIVGFYGAF--------YSDGEISICMEHMDGGSLDQVLKKAGRIPENILGKIS-IAVLRG  111 (308)
T ss_pred             HHHHHHHHHHHHHHhCCCCCCCeEEEEE--------eeCCEEEEEeeccCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHH
Confidence            3446688999999999999999999986        4567899999999999998763        3455666 799999


Q ss_pred             HHHHhhc-C-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSS-M-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~-~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      |.|||+. +       |.|+       +|++|||++.         ..++..|  +|||.+.+.. ++.++|+||+||++
T Consensus       112 l~~lH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~-~~~~~DiwslG~~l  188 (308)
T cd06615         112 LTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY--MSPERLQGTH-YTVQSDIWSLGLSL  188 (308)
T ss_pred             HHHHHhhCCEEECCCChHHEEEecCCcEEEccCCCcccccccccccCCCCcCc--cChhHhcCCC-CCccchHHHHHHHH
Confidence            9999974 4       4554       5999999754         3467789  9999987654 88999999999999


Q ss_pred             HHHHhCCCCCCCCChH
Q psy7174         154 CELLLKAPFLPGESDL  169 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~  169 (188)
                      |++++|+.||...+..
T Consensus       189 ~~l~~g~~p~~~~~~~  204 (308)
T cd06615         189 VEMAIGRYPIPPPDAK  204 (308)
T ss_pred             HHHHhCCCCCCCcchh
Confidence            9999999999766543

Protein kinases (PKs), MAP/ERK kinase (MEK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MEK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MEK1 and MEK2 are dual-specificity PKs that phosphorylate and activate the down

>cd06625 STKc_MEKK3_like Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.92  E-value=9.8e-24  Score=162.08  Aligned_cols=137  Identities=25%  Similarity=0.364  Sum_probs=111.0

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++||||+++++++        .++...++++|+++++++....        ..+..++ .|++.||
T Consensus        47 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~l  117 (263)
T cd06625          47 EVNALECEIQLLKNLQHERIVQYYGCL--------RDDETLSIFMEYMPGGSVKDQLKAYGALTETVTRKYT-RQILEGV  117 (263)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeeEEEE--------ccCCeEEEEEEECCCCcHHHHHHHhCCCCHHHHHHHH-HHHHHHH
Confidence            345688999999999999999999985        4456899999999999987752        3355566 8999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc--------------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR--------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .|||+.+       |+|+       ++++|||++.              ..++..|  +|||.+.+.. ++.++|+||+|
T Consensus       118 ~~lH~~~i~H~dl~p~nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG  194 (263)
T cd06625         118 EYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICSSGTGMKSVTGTPYW--MSPEVISGEG-YGRKADVWSVG  194 (263)
T ss_pred             HHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceeccccccccccccCCCcCccc--cCcceeccCC-CCchhhhHHHH
Confidence            9999988       5555       6999999753              2345678  9999998765 89999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      +++|++++|++||.+.+.......+
T Consensus       195 ~il~el~~g~~p~~~~~~~~~~~~~  219 (263)
T cd06625         195 CTVVEMLTEKPPWAEFEAMAAIFKI  219 (263)
T ss_pred             HHHHHHHhCCCCccccchHHHHHHH
Confidence            9999999999999776554444333

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades t

>cd07836 STKc_Pho85 Catalytic domain of the Serine/Threonine Kinase, Fungal Cyclin-Dependent protein Kinase Pho85

Probab=99.92  E-value=8.7e-24  Score=164.17  Aligned_cols=171  Identities=27%  Similarity=0.535  Sum_probs=127.5

Q ss_pred             cccccc-cCC----cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QSK----WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~~----~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      +|.||+ .++    ..++|.++.. .....+.+.+|++++++++||||+++++++        .++...++++||+.+ +
T Consensus        13 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~-~   83 (284)
T cd07836          13 YATVYKGRNRTTGEIVALKEIHLDAEEGTPSTAIREISLMKELKHENIVRLHDVI--------HTENKLMLVFEYMDK-D   83 (284)
T ss_pred             ceEEEEEEECCCCeEEEEEEecccccccchHHHHHHHHHHHhhcCCCEeeeeeeE--------eeCCcEEEEEecCCc-c
Confidence            567776 222    2233333322 223346678899999999999999999975        445678999999986 4


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          79 KARF-----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        79 l~~~-----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +..+           +..+..++ .|+++||.|||+.+       |.|+       +|++|||++.           ..+
T Consensus        84 l~~~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~h~dl~p~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~  162 (284)
T cd07836          84 LKKYMDTHGVRGALDPNTVKSFT-YQLLKGIAFCHENRVLHRDLKPQNLLINKRGELKLADFGLARAFGIPVNTFSNEVV  162 (284)
T ss_pred             HHHHHHhcCCCCCcCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCCHHHEEECCCCcEEEeecchhhhhcCCccccccccc
Confidence            4432           23455566 79999999999988       4444       6999999754           234


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +..|  ++||.+.+...++.++|+||+||++|++++|++||.+.+..+...++.+....|.+..|
T Consensus       163 ~~~y--~~PE~~~~~~~~~~~~Dv~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  225 (284)
T cd07836         163 TLWY--RAPDVLLGSRTYSTSIDIWSVGCIMAEMITGRPLFPGTNNEDQLLKIFRIMGTPTESTW  225 (284)
T ss_pred             cccc--cChHHhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCChhhH
Confidence            6678  99999876555789999999999999999999999998888888888777666655443

Serine/Threonine Kinases (STKs), Pho85 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Pho85 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Pho85 is a multifunctional Cyclin-Dependent protein Kinase (CDK) in yeast. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. Pho85 is regulated by 10 different cyclins (Pcls) and plays a role in G1 progression, cell polarity, phosphate and glycogen metabolism, gene expression, and in signaling changes in the environment.

>cd05580 STKc_PKA Catalytic domain of the Protein Serine/Threonine Kinase, cAMP-dependent protein kinase

Probab=99.92  E-value=1.2e-23  Score=164.24  Aligned_cols=160  Identities=18%  Similarity=0.265  Sum_probs=122.5

Q ss_pred             cccccc--c---CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ--Q---SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~--~---~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      +|.||.  .   ++..++|.+.+.   ..+..+.+.+|++++++++||||+++++++        .++...++++||+.+
T Consensus        14 ~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~   85 (290)
T cd05580          14 FGRVMLVRHKGSGKYYALKILSKAKIVKLKQVEHVLNEKRILQSIRHPFLVNLYGSF--------QDDSNLYLVMEYVPG   85 (290)
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHHhCCCCCccceeeEE--------EcCCeEEEEEecCCC
Confidence            567775  1   223334433332   233456788999999999999999999975        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      +++..+        ...+..++ .|+++||.|||+.+       |.|+       +|++|||++.        ..++..|
T Consensus        86 ~~L~~~~~~~~~l~~~~~~~~~-~qil~~l~~lH~~~i~H~dl~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y  164 (290)
T cd05580          86 GELFSHLRKSGRFPEPVARFYA-AQVVLALEYLHSLDIVYRDLKPENLLLDSDGYIKITDFGFAKRVKGRTYTLCGTPEY  164 (290)
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEeeCCCccccCCCCCCCCCCccc
Confidence            998775        23455566 79999999999988       4444       6999999865        3466778


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                        +|||.+.+.. ++.++|+||+|+++|+|++|+.||...+......++.
T Consensus       165 --~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  211 (290)
T cd05580         165 --LAPEIILSKG-YGKAVDWWALGILIYEMLAGYPPFFDDNPIQIYEKIL  211 (290)
T ss_pred             --cChhhhcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence              9999987754 7899999999999999999999998777655555554

Serine/Threonine Kinases (STKs), cAMP-dependent protein kinase (PKA) subfamily, catalytic (c) subunit. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PKA subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This subfamily is composed of the cAMP-dependent proteins kinases, PKA and PRKX. The inactive PKA holoenzyme is a heterotetramer composed of two phosphorylated and active catalytic (C) subunits with a dimer of regulatory (R) subunits. Activation is achieved through the binding of the important second messenger cAMP to the R subunits, which leads to the dissociation of PKA into the R dimer and two active C subunits. PKA is present ubi

>KOG0596|consensus

Probab=99.92  E-value=1.6e-24  Score=175.83  Aligned_cols=130  Identities=20%  Similarity=0.316  Sum_probs=107.8

Q ss_pred             chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQ   93 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~q   93 (188)
                      +......+.+|+..|.+|+ |.+||+++++        ...+..+|+||| |..-+|..++         ..++++. +|
T Consensus       399 D~qtl~gy~nEI~lL~KLkg~~~IIqL~DY--------Ev~d~~lYmvmE-~Gd~DL~kiL~k~~~~~~~~~lk~yw-kq  468 (677)
T KOG0596|consen  399 DNQTLDGYRNEIALLNKLKGHDKIIQLYDY--------EVTDGYLYMVME-CGDIDLNKILKKKKSIDPDWFLKFYW-KQ  468 (677)
T ss_pred             CHHHHHHHHHHHHHHHHhcCCceEEEEeee--------eccCceEEEEee-cccccHHHHHHhccCCCchHHHHHHH-HH
Confidence            4556677899999999997 9999999996        255889999999 5677777763         3577777 89


Q ss_pred             HHHHHHHHhhcC-------CCCe------EEEecCCccc-------------ccccccccCCCCccccccC---------
Q psy7174          94 ILEGLQALKSSM-------PALL------KKFVGIGIGR-------------HVCTLYCTRGAPELLFGAR---------  138 (188)
Q Consensus        94 i~~gl~~lH~~~-------~~~i------lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~---------  138 (188)
                      ++.++.++|.+|       |.|.      |||+|||.+.             .+||..|  |+||.+....         
T Consensus       469 ML~aV~~IH~~gIVHSDLKPANFLlVkG~LKLIDFGIA~aI~~DTTsI~kdsQvGT~NY--MsPEAl~~~~s~~~~~~~k  546 (677)
T KOG0596|consen  469 MLLAVKTIHQHGIVHSDLKPANFLLVKGRLKLIDFGIANAIQPDTTSIVKDSQVGTVNY--MSPEALTDMSSSRENGKSK  546 (677)
T ss_pred             HHHHHHHHHHhceeecCCCcccEEEEeeeEEeeeechhcccCccccceeeccccCcccc--cCHHHHhhccccccCCCcc
Confidence            999999999999       6655      6999999854             6799999  9999985422         


Q ss_pred             -CCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         139 -MYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       139 -~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                       ..+.++||||||||+|+|..|++||..
T Consensus       547 ~Ki~r~SDvWSLGCILYqMvYgktPf~~  574 (677)
T KOG0596|consen  547 IKISRKSDVWSLGCILYQMVYGKTPFGQ  574 (677)
T ss_pred             eeecCccchhhhhhHHHHHHhcCCchHH
Confidence             135789999999999999999999964

>cd06659 STKc_PAK6 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 6

Probab=99.92  E-value=2.4e-24  Score=169.09  Aligned_cols=159  Identities=16%  Similarity=0.210  Sum_probs=122.4

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+........+.+.+|+.+++.++||||+++++++        ..+...++++||++++++
T Consensus        34 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~--------~~~~~~~iv~e~~~~~~L  105 (297)
T cd06659          34 TGIVCIAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHQNVVEMYKSY--------LVGEELWVLMEFLQGGAL  105 (297)
T ss_pred             ceeEEEEEEcCCCCEEEEEEEEecccchHHHHHHHHHHHHhCCCCchhhhhhhe--------eeCCeEEEEEecCCCCCH
Confidence            566766 2    222334444333334456788999999999999999999975        446788999999999998


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       +..+..++ .|+++||.|||+++       |+|+       +||+|||++.           ..++..| 
T Consensus       106 ~~~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~~ivH~dl~p~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y-  183 (297)
T cd06659         106 TDIVSQTRLNEEQIATVC-ESVLQALCYLHSQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYW-  183 (297)
T ss_pred             HHHHhhcCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHeEEccCCcEEEeechhHhhcccccccccceecCccc-
Confidence            875       34456666 89999999999988       5555       6999999753           3467789 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                       +|||.+.+.. ++.++|+||+||+++++++|+.||...+..+.+..+
T Consensus       184 -~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~p~~~~~~~~~~~~~  229 (297)
T cd06659         184 -MAPEVISRTP-YGTEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRL  229 (297)
T ss_pred             -cCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence             9999997765 899999999999999999999999876655544433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 6, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK6 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK6 may play a role i

>cd07840 STKc_CDK9_like Catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases

Probab=99.92  E-value=1.2e-23  Score=163.35  Aligned_cols=174  Identities=30%  Similarity=0.545  Sum_probs=130.3

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|.||+ .    ++..++|.+...  .....+.+.+|++++++++|||++++++++..      ......++++||+.+ 
T Consensus        12 ~~~vy~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~~~lv~e~~~~-   84 (287)
T cd07840          12 YGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRHPNIVRLKEIVTS------KGKGSIYMVFEYMDH-   84 (287)
T ss_pred             CeEEEEEEECCCCeEEEEEEEecccccccchHHHHHHHHHHHhccCCCeeeheeeEec------CCCCcEEEEeccccc-
Confidence            577777 1    122334444332  22334568899999999999999999998521      113688999999975 


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cc
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VC  122 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~  122 (188)
                      ++..+         +..+..++ .|+++||+|||+.+       |.|+       +|++|||++..            .+
T Consensus        85 ~l~~~~~~~~~~~~~~~~~~i~-~~i~~al~~LH~~~~~h~dl~p~nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  163 (287)
T cd07840          85 DLTGLLDSPEVKFTESQIKCYM-KQLLEGLQYLHSNGILHRDIKGSNILINNDGVLKLADFGLARPYTKRNSADYTNRVI  163 (287)
T ss_pred             cHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHCCceeccCcHHHeEEcCCCCEEEccccceeeccCCCccccccccc
Confidence            55443         23455666 79999999999988       4443       69999997542            23


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +..|  +|||.+.+...++.++|+||+|+++|++++|++||.+.+....+..+....+.|.+..||
T Consensus       164 ~~~y--~~PE~~~~~~~~~~~~Dv~slG~~l~el~t~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  227 (287)
T cd07840         164 TLWY--RPPELLLGATRYGPEVDMWSVGCILAELFLGKPIFQGSTELEQLEKIFELCGSPTDENWP  227 (287)
T ss_pred             cccc--CCceeeEccccCChHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCchhhcc
Confidence            5568  999987654448899999999999999999999999988888888888888888777775

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RNA po

>cd05078 PTK_Jak2_Jak3_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=1e-23  Score=162.08  Aligned_cols=133  Identities=13%  Similarity=0.121  Sum_probs=106.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|+.+++.++||||+++++++        ..+...+++|||+.+|+|..+.         ..+..++ .|++.
T Consensus        41 ~~~~~~~~e~~~l~~~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~-~qi~~  111 (258)
T cd05078          41 NYSESFFEAASMMSQLSHKHLVLNYGVC--------VCGDESIMVQEYVKFGSLDTYLKKNKNLINISWKLEVA-KQLAW  111 (258)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeEE--------EeCCCcEEEEecCCCCcHHHHHhcCCCCCCHHHHHHHH-HHHHH
Confidence            3446778899999999999999999976        3456789999999999998762         3344456 79999


Q ss_pred             HHHHHhhcC-------CCCe---------------EEEecCCccc-------ccccccccCCCCccccccCCCCchhHHH
Q psy7174          97 GLQALKSSM-------PALL---------------KKFVGIGIGR-------HVCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        97 gl~~lH~~~-------~~~i---------------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      ||+|||+.+       |+|+               +|++|||++.       ..++..|  +|||++.+...++.++|+|
T Consensus       112 ~l~~lH~~~iiH~dlkp~nili~~~~~~~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Diw  189 (258)
T cd05078         112 ALHFLEDKGLTHGNVCAKNVLLIREEDRKTGNPPFIKLSDPGISITVLPKEILLERIPW--VPPECIENPQNLSLAADKW  189 (258)
T ss_pred             HHHHHHHCCeecCCCccceEEEecccccccCCCceEEecccccccccCCchhccccCCc--cCchhccCCCCCCchhhHH
Confidence            999999988       4444               4889999754       3466779  9999997755588999999


Q ss_pred             HHHHHHHHHHhC-CCCCCCCChH
Q psy7174         148 AVGCIICELLLK-APFLPGESDL  169 (188)
Q Consensus       148 slG~il~el~~g-~~pf~~~~~~  169 (188)
                      |+||++|++++| .+|+...+..
T Consensus       190 slG~~l~~l~~g~~~~~~~~~~~  212 (258)
T cd05078         190 SFGTTLWEIFSGGDKPLSALDSQ  212 (258)
T ss_pred             HHHHHHHHHHcCCCCChhhccHH
Confidence            999999999998 5676554443

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; pseudokinase domain (repeat 1). The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the kinase activity

>KOG0584|consensus

Probab=99.91  E-value=1.9e-24  Score=177.30  Aligned_cols=144  Identities=19%  Similarity=0.240  Sum_probs=119.6

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQIL   95 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~   95 (188)
                      +....+++..|+.+|+.|+||||+++++.+..      .+.....+++|.++.|+|..+.        ..++.+. +||+
T Consensus        81 ~~~~leR~~~Ev~lLKsL~H~NIirfy~SW~d------~~n~~in~iTEL~TSGtLr~Y~kk~~~vn~kaik~W~-RQIL  153 (632)
T KOG0584|consen   81 SPEELERLYSEVHLLKSLKHPNIIRFYDSWVD------TDNKTINFITELFTSGTLREYRKKHRRVNIKAIKSWC-RQIL  153 (632)
T ss_pred             ChHHHHHHHHHHHHHccCCCCceeeeeeheec------CCCceeeeeeecccCCcHHHHHHHhccCCHHHHHHHH-HHHH
Confidence            44556889999999999999999999998632      3446788999999999999873        4577788 9999


Q ss_pred             HHHHHHhhcCCCCe-----------------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          96 EGLQALKSSMPALL-----------------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        96 ~gl~~lH~~~~~~i-----------------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      +||.|||++.|..|                 +||.|+|+++         .+||+.|  ||||+.-.  .|+..+|||||
T Consensus       154 kGL~yLHs~~PPIIHRDLKCDNIFinG~~G~VKIGDLGLAtl~r~s~aksvIGTPEF--MAPEmYEE--~YnE~VDVYaF  229 (632)
T KOG0584|consen  154 KGLVYLHSQDPPIIHRDLKCDNIFVNGNLGEVKIGDLGLATLLRKSHAKSVIGTPEF--MAPEMYEE--NYNELVDVYAF  229 (632)
T ss_pred             HHhhhhhcCCCCccccccccceEEEcCCcCceeecchhHHHHhhccccceeccCccc--cChHHHhh--hcchhhhhhhh
Confidence            99999999983332                 7999999843         5899999  99999863  49999999999


Q ss_pred             HHHHHHHHhCCCCCCC-CChHHHHHHHHhh
Q psy7174         150 GCIICELLLKAPFLPG-ESDLDQLTRIFQT  178 (188)
Q Consensus       150 G~il~el~~g~~pf~~-~~~~~~~~~i~~~  178 (188)
                      |.-+.||+|+..||.. .++.+++.++..+
T Consensus       230 GMCmLEMvT~eYPYsEC~n~AQIYKKV~SG  259 (632)
T KOG0584|consen  230 GMCMLEMVTSEYPYSECTNPAQIYKKVTSG  259 (632)
T ss_pred             hHHHHHHHhccCChhhhCCHHHHHHHHHcC
Confidence            9999999999999976 4555556666544

>cd05061 PTKc_InsR Catalytic domain of the Protein Tyrosine Kinase, Insulin Receptor

Probab=99.91  E-value=2.2e-23  Score=162.73  Aligned_cols=138  Identities=15%  Similarity=0.260  Sum_probs=110.0

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH------------------HHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS------------------HLRY   88 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~------------------~~~~   88 (188)
                      ....+.+|+.++++++||||+++++++        .+....+++|||+++|+|..+..                  .+..
T Consensus        52 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  123 (288)
T cd05061          52 ERIEFLNEASVMKGFTCHHVVRLLGVV--------SKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQ  123 (288)
T ss_pred             HHHHHHHHHHHHHhCCCCCeeeEEEEE--------cCCCCcEEEEeCCCCCCHHHHHHHhccccccCCCCCCCCHHHHHH
Confidence            345678899999999999999999975        34557899999999999988743                  2344


Q ss_pred             HHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCC
Q psy7174          89 LENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYG  141 (188)
Q Consensus        89 ~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~  141 (188)
                      ++ .|++.||.|||+++       |+|+       +|++|||+++.             .++..|  +|||.+.+.. ++
T Consensus       124 ~~-~~l~~~l~~lH~~~i~H~dikp~nili~~~~~~~L~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~~pE~~~~~~-~~  199 (288)
T cd05061         124 MA-AEIADGMAYLNAKKFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW--MAPESLKDGV-FT  199 (288)
T ss_pred             HH-HHHHHHHHHHHhCCCcCCCCChheEEEcCCCcEEECcCCccccccccccccccCCCcccccc--cCHHHhccCC-CC
Confidence            55 79999999999988       6666       59999998642             224468  9999987755 89


Q ss_pred             chhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         142 VGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       142 ~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      .++|+||+||++||+++ |.+||.+....+....+.
T Consensus       200 ~~~DvwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  235 (288)
T cd05061         200 TSSDMWSFGVVLWEITSLAEQPYQGLSNEQVLKFVM  235 (288)
T ss_pred             hHhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            99999999999999998 788997766555544443

Protein Tyrosine Kinase (PTK) family; Insulin Receptor (InsR); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. InsR is a receptor tyr kinase (RTK) that is composed of two alphabeta heterodimers. Binding of the insulin ligand to the extracellular alpha subunit activates the intracellular tyr kinase domain of the transmembrane beta subunit. Receptor activation leads to autophosphorylation, stimulating downstream kinase activities, which initiate signaling cascades and biological function. InsR signaling plays an important role in many cellular processes including glucose homeostasis, glycogen synthesis, lipid and protein meta

>cd07835 STKc_CDK1_like Catalytic domain of Cyclin-Dependent protein Kinase 1-like Serine/Threonine Kinases

Probab=99.91  E-value=1.3e-23  Score=163.30  Aligned_cols=148  Identities=35%  Similarity=0.671  Sum_probs=117.6

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQILEG   97 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~qi~~g   97 (188)
                      .+.+.+|+++++.++|||++++++++        .++...++++||+. +++..+          +..+..++ .|+++|
T Consensus        42 ~~~~~~E~~~l~~l~~~~iv~~~~~~--------~~~~~~~iv~e~~~-~~l~~~~~~~~~~~~~~~~~~~~~-~~i~~~  111 (283)
T cd07835          42 PSTAIREISLLKELNHPNIVRLLDVV--------HSENKLYLVFEFLD-LDLKKYMDSSPLTGLDPPLIKSYL-YQLLQG  111 (283)
T ss_pred             hhHHHHHHHHHHhcCCCCccCHhhee--------ccCCeEEEEEeccC-cCHHHHHhhCCCCCCCHHHHHHHH-HHHHHH
Confidence            35678899999999999999999975        45678899999996 455554          23345566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      |+|||+.+       |+|+       ++++|||++..           .++..|  +|||.+.....++.++|+||+|++
T Consensus       112 L~~lH~~~~~H~dl~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~~~~~~~Di~slG~~  189 (283)
T cd07835         112 IAYCHSHRVLHRDLKPQNLLIDREGALKLADFGLARAFGVPVRTYTHEVVTLWY--RAPEILLGSRQYSTPVDIWSIGCI  189 (283)
T ss_pred             HHHHHHCCeeCCCCCHHHEEEcCCCcEEEeecccccccCCCccccCccccccCC--CCCceeecCcccCcHHHHHHHHHH
Confidence            99999988       4444       69999997542           235678  999988665447899999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +|++++|++||.+.++...+.++.+..+.|.+..|
T Consensus       190 l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  224 (283)
T cd07835         190 FAEMVNRRPLFPGDSEIDQLFRIFRTLGTPDEDVW  224 (283)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHHh
Confidence            99999999999998888888788777766665444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 1 (CDK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK1 from higher eukaryotes, plants, and yeasts, as well as CDK2 and CDK3. CDK1 is also called Cell division control protein 2 (Cdc2) or p34 protein kinase, and is regulated by cyclins A, B, and E. The CDK1/cyc

>cd05630 STKc_GRK6 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 6

Probab=99.91  E-value=9.9e-24  Score=164.64  Aligned_cols=127  Identities=17%  Similarity=0.288  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILEGL   98 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+|+.++++++|+||+++++.+        .++...++++||+.+++|....          ..+..++ .|++.||
T Consensus        45 ~~~~~E~~il~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~l~~~~~~~~~-~qi~~~l  115 (285)
T cd05630          45 SMALNEKQILEKVNSRFVVSLAYAY--------ETKDALCLVLTLMNGGDLKFHIYHMGEAGFEEGRAVFYA-AEICCGL  115 (285)
T ss_pred             HHHHHHHHHHHhCCCCCeeeeeEEE--------ecCCEEEEEEEecCCCcHHHHHHHhcccCCCHHHHHHHH-HHHHHHH
Confidence            4567899999999999999999875        4456789999999999997652          3455566 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      .|||+.+       |+|+       ++++|||++.          ..|+..|  +|||++.+.. ++.++|+||+||++|
T Consensus       116 ~~lH~~~iiH~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~g~~~y--~aPE~~~~~~-~~~~~DiwslG~~l~  192 (285)
T cd05630         116 EDLHQERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGY--MAPEVVKNER-YTFSPDWWALGCLLY  192 (285)
T ss_pred             HHHHhCCEEeCCCCHHHEEECCCCCEEEeeccceeecCCCccccCCCCCccc--cChHHHcCCC-CCCccccHHHHHHHH
Confidence            9999988       4444       6999999754          2467789  9999998765 899999999999999


Q ss_pred             HHHhCCCCCCCCC
Q psy7174         155 ELLLKAPFLPGES  167 (188)
Q Consensus       155 el~~g~~pf~~~~  167 (188)
                      +|++|++||.+..
T Consensus       193 ~l~~g~~Pf~~~~  205 (285)
T cd05630         193 EMIAGQSPFQQRK  205 (285)
T ss_pred             HHHhCCCCCCCCC
Confidence            9999999998643

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK6 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK6 is widely expressed in many tissues. t is expressed as

>KOG0984|consensus

Probab=99.91  E-value=4.6e-24  Score=154.97  Aligned_cols=156  Identities=17%  Similarity=0.247  Sum_probs=120.1

Q ss_pred             cCCccc-ccccccc----chhhhhHHHHHHHHHHh-CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--
Q psy7174          11 QSKWSP-NTPMARC----DVNVETQAKAEGKQDRR-LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--   82 (188)
Q Consensus        11 ~~~~~~-~~~i~~~----~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--   82 (188)
                      .+.++. +.|+|+.    ..+..++.++|+.+..+ ..+|.+|+|+|.+        ..+...|+.||.+ ..+++.+  
T Consensus        66 rh~~sg~imAvKri~~tvn~q~q~r~L~dldi~~r~~~CPf~V~FyGa~--------~regdvwIcME~M-~tSldkfy~  136 (282)
T KOG0984|consen   66 RHIQSGTIMAVKRIRATVNSQEQKRLLMDLDIIMRTVDCPFTVHFYGAL--------FREGDVWICMELM-DTSLDKFYR  136 (282)
T ss_pred             eeccCCeEEEEeeehhhcChHHHHHHHHhhhhhccCCCCCeEEEeehhh--------hccccEEEeHHHh-hhhHHHHHH
Confidence            445555 6677763    34455677889997665 4699999999964        5678899999988 4555554  


Q ss_pred             ----------HHHHHHHHHHHHHHHHHHHhhcC--------CCCe-------EEEecCCccc----------cccccccc
Q psy7174          83 ----------YSHLRYLENQQILEGLQALKSSM--------PALL-------KKFVGIGIGR----------HVCTLYCT  127 (188)
Q Consensus        83 ----------~~~~~~~~~~qi~~gl~~lH~~~--------~~~i-------lkl~dfg~~~----------~~~~~~y~  127 (188)
                                +..+..++ ..+++||.|||++-        |+|+       +|+||||.+.          ..|+..| 
T Consensus       137 ~v~~~g~~ipE~vlGkIa-~Svv~al~~L~~kL~vIHRDvKPsNiLIn~~GqVKiCDFGIsG~L~dSiAkt~daGCkpY-  214 (282)
T KOG0984|consen  137 KVLKKGGTIPEDVLGKIA-VSVVHALEFLHSKLSVIHRDVKPSNILINYDGQVKICDFGISGYLVDSIAKTMDAGCKPY-  214 (282)
T ss_pred             HHHhcCCcCchHHhhHhH-HHHHHHHHHHHHHhhhhhccCCcceEEEccCCcEEEcccccceeehhhhHHHHhcCCCcc-
Confidence                      34455666 68999999999976        8888       5999999854          4688899 


Q ss_pred             CCCCccccc---cCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhh
Q psy7174         128 RGAPELLFG---ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQT  178 (188)
Q Consensus       128 ~~aPe~~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~  178 (188)
                       +|||.+..   ...|+.++||||||+++.||++++.||..+ .+.+++.++++.
T Consensus       215 -maPEri~~e~n~~gY~vksDvWSLGItmiElA~lr~PY~~w~tpF~qLkqvVee  268 (282)
T KOG0984|consen  215 -MAPERINPELNQKGYSVKSDVWSLGITMIEMAILRFPYESWGTPFQQLKQVVEE  268 (282)
T ss_pred             -CChhhcCcccCcccceeehhhhhhhhhhhhhhhccccccccCCHHHHHHHHhcC
Confidence             99999842   235999999999999999999999999775 566666666543

>KOG1094|consensus

Probab=99.91  E-value=1.5e-24  Score=177.09  Aligned_cols=155  Identities=17%  Similarity=0.173  Sum_probs=123.4

Q ss_pred             ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHH----------
Q psy7174          17 NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH----------   85 (188)
Q Consensus        17 ~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~----------   85 (188)
                      +|.++.. ..+.+.++.+|+++|.+|+||||++++|+|        ..+...++++||+..|+|..+...          
T Consensus       567 VK~Lr~~a~~~~r~~F~kEIkiLsqLkhPNIveLvGVC--------~~DePicmI~EYmEnGDLnqFl~aheapt~~t~~  638 (807)
T KOG1094|consen  567 VKILRPDATKNARNDFLKEIKILSRLKHPNIVELLGVC--------VQDDPLCMITEYMENGDLNQFLSAHELPTAETAP  638 (807)
T ss_pred             EeecCcccchhHHHHHHHHHHHHhccCCCCeeEEEeee--------ecCCchHHHHHHHhcCcHHHHHHhccCcccccch
Confidence            4444443 344568899999999999999999999998        557789999999999999997421          


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccC
Q psy7174          86 LRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGAR  138 (188)
Q Consensus        86 ~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~  138 (188)
                      ...++ .||+.||+||.+.+       +.|+       +||+|||+++..             -...|  +|+|.+...+
T Consensus       639 ~vsi~-tqiasgmaYLes~nfVHrd~a~rNcLv~~e~~iKiadfgmsR~lysg~yy~vqgr~vlpiRw--mawEsillgk  715 (807)
T KOG1094|consen  639 GVSIC-TQIASGMAYLESLNFVHRDLATRNCLVDGEFTIKIADFGMSRNLYSGDYYRVQGRAVLPIRW--MAWESILLGK  715 (807)
T ss_pred             hHHHH-HHHHHHHHHHHhhchhhccccccceeecCcccEEecCcccccccccCCceeeecceeeeeee--hhHHHHHhcc
Confidence            23355 79999999998876       5555       599999987622             23456  8999998766


Q ss_pred             CCCchhHHHHHHHHHHHHH--hCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         139 MYGVGIDMWAVGCIICELL--LKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~--~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                       ++.++|+|++|+++||++  +...||....+.+..++....+..++
T Consensus       716 -FttaSDvWafgvTlwE~~~~C~e~Py~~lt~e~vven~~~~~~~~~  761 (807)
T KOG1094|consen  716 -FTTASDVWAFGVTLWEVFMLCREQPYSQLTDEQVVENAGEFFRDQG  761 (807)
T ss_pred             -ccchhhhhhhHHHHHHHHHHHhhCchhhhhHHHHHHhhhhhcCCCC
Confidence             999999999999999997  47889998888888877766655433

>cd05086 PTKc_Aatyk2 Catalytic domain of the Protein Tyrosine Kinase, Apoptosis-associated tyrosine kinase 2

Probab=99.91  E-value=2.5e-23  Score=160.83  Aligned_cols=161  Identities=19%  Similarity=0.175  Sum_probs=119.0

Q ss_pred             ccccccc----CCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQQ----SKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~~----~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||+||+.    ......++++..    .....+.+.+|+.+++.++||||+++++.|        .+....+++|||+.+
T Consensus         8 ~g~v~~~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~   79 (268)
T cd05086           8 FGKVLLSEIYTDTGVARVVVKELKANASSKEQNEFLQQGDPYRILQHPNILQCLGQC--------VEAIPYLLVFEYCEL   79 (268)
T ss_pred             CceEEEEEEEcCCCcceEEEEEecCCCChHHHHHHHHHHHHHhccCCcchhheEEEe--------cCCCccEEEEecCCC
Confidence            7788861    112223334432    234556889999999999999999999976        345678999999999


Q ss_pred             ccHHHHHH------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          77 TTKARFYS------------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        77 ~~l~~~~~------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      ++|..+..            .+..++ .|+++||+|||+.+       |+|+       +|++|||++.           
T Consensus        80 ~~L~~~l~~~~~~~~~~~~~~~~~~~-~~i~~al~~lH~~~i~H~dikp~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~  158 (268)
T cd05086          80 GDLKSYLSQEQWHRRNSQLLLLQRMA-CEIAAGVTHMHKHNFLHSDLALRNCFLTSDLTVKVGDYGIGPSRYKEDYIETE  158 (268)
T ss_pred             CcHHHHHHhhhcccccccHHHHHHHH-HHHHHHHHHHHHCCeeccCCccceEEEcCCccEEecccccccccCcchhhhcc
Confidence            99987532            234555 79999999999988       6666       5999999753           


Q ss_pred             --ccccccccCCCCcccccc------CCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         120 --HVCTLYCTRGAPELLFGA------RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~------~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                        ..++..|  +|||++...      ..++.++|+||+||++|||++ +.+||...++.+.+..+.
T Consensus       159 ~~~~~~~~y--~aPE~~~~~~~~~~~~~~~~~~DiwslG~~l~el~~~~~~p~~~~~~~~~~~~~~  222 (268)
T cd05086         159 DDKCVPLRW--LAPELVGEFHGGLITAEQTKPSNVWALGVTLWELFENAAQPYSHLSDREVLNHVI  222 (268)
T ss_pred             cCCcCcccc--cCchhcccccCccccCCCCCcchhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence              2345678  999987431      125778999999999999996 578998777766665554

Protein Tyrosine Kinase (PTK) family; Apoptosis-associated tyrosine kinase 2 (Aatyk2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Aatyk2 is a member of the Aatyk subfamily of proteins, which are receptor kinases containing a transmembrane segment and a long C-terminal cytoplasmic tail with a catalytic domain. Aatyk2 is also called lemur tyrosine kinase 2 (Lmtk2) or brain-enriched kinase (Brek). It is expressed at high levels in early postnatal brain, and has been shown to play a role in nerve growth factor (NGF) signaling. Studies with knockout mice reveal that Aatyk2 is essential for late stage

>cd06612 STKc_MST1_2 Catalytic domain of the Protein Serine/Threonine Kinases, Mammalian Ste20-like protein kinase 1 and 2

Probab=99.91  E-value=1.4e-23  Score=160.44  Aligned_cols=128  Identities=19%  Similarity=0.267  Sum_probs=107.2

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|++++++++||||+++++.+        ..+...++++|++.++++..+.         ..+..++ .|+++||
T Consensus        42 ~~~~~~e~~~~~~l~~~~i~~~~~~~--------~~~~~~~l~~e~~~~~~L~~~l~~~~~~l~~~~~~~~~-~~l~~~l  112 (256)
T cd06612          42 LQEIIKEISILKQCDSPYIVKYYGSY--------FKNTDLWIVMEYCGAGSVSDIMKITNKTLTEEEIAAIL-YQTLKGL  112 (256)
T ss_pred             HHHHHHHHHHHHhCCCCcEeeeeeee--------ecCCcEEEEEecCCCCcHHHHHHhCccCCCHHHHHHHH-HHHHHHH
Confidence            67899999999999999999999975        4457889999999999988752         3455666 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      .|||+.+       |+|+       +|++|||++.           ..++..|  +|||.+.+.. ++.++|+||+|+++
T Consensus       113 ~~lh~~~i~H~dl~~~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Di~s~G~il  189 (256)
T cd06612         113 EYLHSNKKIHRDIKAGNILLNEEGQAKLADFGVSGQLTDTMAKRNTVIGTPFW--MAPEVIQEIG-YNNKADIWSLGITA  189 (256)
T ss_pred             HHHHHCCcccCCCCcceEEECCCCcEEEcccccchhcccCccccccccCCccc--cCHHHHhcCC-CCchhhHHHHHHHH
Confidence            9999988       5555       6999999744           2356678  9999987755 89999999999999


Q ss_pred             HHHHhCCCCCCCCC
Q psy7174         154 CELLLKAPFLPGES  167 (188)
Q Consensus       154 ~el~~g~~pf~~~~  167 (188)
                      ++|++|++||....
T Consensus       190 ~~l~~g~~p~~~~~  203 (256)
T cd06612         190 IEMAEGKPPYSDIH  203 (256)
T ss_pred             HHHHhCCCCCCCcc
Confidence            99999999996544

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 1 (MST1) and MST2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST1/2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST1, MST2, and related proteins including Drosophila Hippo and Dictyostelium discoideum Krs1 (kinase responsive to stress 1). MST1/2 and Hippo are involved in a conserved pathway that governs cell contact inhibition, organ size control, and tumor development. MST1 activates the mitogen-activated protein kinases (MAPKs) p38 and c-Jun N-terminal kinase (JNK) through MKK7 (a

>cd06646 STKc_MAP4K5 Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-activated protein kinase kinase kinase kinase 5

Probab=99.91  E-value=5.1e-24  Score=164.23  Aligned_cols=152  Identities=20%  Similarity=0.211  Sum_probs=114.2

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    +..++|.+..........+.+|+.++++++||||+++++.+        ..+...++++||++++++
T Consensus        22 ~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~~e~~~l~~~~h~~ii~~~~~~--------~~~~~~~iv~e~~~~~~L   93 (267)
T cd06646          22 YGDVYKARNLHTGELAAVKIIKLEPGDDFSLIQQEIFMVKECKHCNIVAYFGSY--------LSREKLWICMEYCGGGSL   93 (267)
T ss_pred             CeEEEEEEECCCCeEEEEEEEecCccchHHHHHHHHHHHHhcCCCCeeeeeEEE--------EeCCEEEEEEeCCCCCcH
Confidence            677776 22    22234433322233445678999999999999999999975        345678999999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          80 ARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        80 ~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      ..+.        ..+..++ .|+++||.|||+.+       |+|+       +|++|||++.           ..++..|
T Consensus        94 ~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dl~p~nill~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  172 (267)
T cd06646          94 QDIYHVTGPLSELQIAYVC-RETLQGLAYLHSKGKMHRDIKGANILLTDNGDVKLADFGVAAKITATIAKRKSFIGTPYW  172 (267)
T ss_pred             HHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCCHHHEEECCCCCEEECcCccceeecccccccCccccCccc
Confidence            8752        3456666 89999999999988       5555       6999999754           2356678


Q ss_pred             cCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         127 TRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       127 ~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                        +|||.+..  ...++.++|+||+||++|+|++|+.||...+
T Consensus       173 --~~PE~~~~~~~~~~~~~~Dvws~G~il~el~~g~~p~~~~~  213 (267)
T cd06646         173 --MAPEVAAVEKNGGYNQLCDIWAVGITAIELAELQPPMFDLH  213 (267)
T ss_pred             --cCHhHcccccCCCCcchhhHHHHHHHHHHHHhCCCCccccc
Confidence              99998742  2237789999999999999999999986543

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 5 (MAPKKKK5 or MAP4K5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to MAP4K4/6. MAP4Ks are involved in some MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Each MAPK cascade is activated

>cd05099 PTKc_FGFR4 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 4

Probab=99.91  E-value=2.2e-23  Score=164.68  Aligned_cols=140  Identities=21%  Similarity=0.293  Sum_probs=110.3

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ....++.+|+++++++ +||||+++++++        ..+...++++||+++++|..+..                    
T Consensus        59 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~  130 (314)
T cd05099          59 KDLADLISEMELMKLIGKHKNIINLLGVC--------TQEGPLYVIVEYAAKGNLREFLRARRPPGPDYTFDITKVPEEQ  130 (314)
T ss_pred             HHHHHHHHHHHHHHhccCCCCeeeEEEEE--------ccCCceEEEEecCCCCcHHHHHHhcCCCcccccccccCCcccc
Confidence            3456788999999999 599999999975        34567899999999999877542                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCcc
Q psy7174          85 ----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPEL  133 (188)
Q Consensus        85 ----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~  133 (188)
                          .+..++ .|++.||.|||+++       |+|+       +|++|||+++..             ++..|  +|||.
T Consensus       131 l~~~~~~~~~-~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~  207 (314)
T cd05099         131 LSFKDLVSCA-YQVARGMEYLESRRCIHRDLAARNVLVTEDNVMKIADFGLARGVHDIDYYKKTSNGRLPVKW--MAPEA  207 (314)
T ss_pred             cCHHHHHHHH-HHHHHHHHHHHHCCeeeccccceeEEEcCCCcEEEccccccccccccccccccccCCCCccc--cCHHH
Confidence                233455 79999999999988       5665       599999986522             12358  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.+.. ++.++|+||+|+++|++++ |..||.+.+..+....+..
T Consensus       208 ~~~~~-~~~~~DiwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~  251 (314)
T cd05099         208 LFDRV-YTHQSDVWSFGILMWEIFTLGGSPYPGIPVEELFKLLRE  251 (314)
T ss_pred             HccCC-cCccchhhHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHc
Confidence            87754 8999999999999999998 8899987766555554433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 4 (FGFR4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR4 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05081 PTKc_Jak2_Jak3_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases 2 and 3

Probab=99.91  E-value=2.2e-23  Score=162.12  Aligned_cols=137  Identities=18%  Similarity=0.268  Sum_probs=105.7

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLR   87 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~   87 (188)
                      +|.++.......+.+.+|++++++++||||+++++++..      .++...++++||+++++|..+.         ..+.
T Consensus        38 iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~  111 (284)
T cd05081          38 VKKLQHSTAEHLRDFEREIEILKSLQHDNIVKYKGVCYS------AGRRNLRLVMEYLPYGSLRDYLQKHRERLDHRKLL  111 (284)
T ss_pred             EEEeccCCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEcc------CCCCceEEEEEecCCCCHHHHHHhcCcCCCHHHHH
Confidence            333333344455678999999999999999999997522      3445689999999999998763         2344


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCccccccCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGARM  139 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~~~  139 (188)
                      .++ .|++.||.|||+++       |+|+       +|++|||++...              ++..|  +|||.+.+.. 
T Consensus       112 ~~~-~~l~~aL~~LH~~~i~H~dlkp~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-  187 (284)
T cd05081         112 LYA-SQICKGMEYLGSKRYVHRDLATRNILVESENRVKIGDFGLTKVLPQDKEYYKVREPGESPIFW--YAPESLTESK-  187 (284)
T ss_pred             HHH-HHHHHHHHHHHHCCceeccCCHhhEEECCCCeEEECCCcccccccCCCcceeecCCCCCceEe--eCHHHhccCC-
Confidence            555 79999999999998       6666       599999986522              12247  8999987755 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCC
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFL  163 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf  163 (188)
                      ++.++|+||+||+++|++++..++
T Consensus       188 ~~~~~Di~slG~~l~el~~~~~~~  211 (284)
T cd05081         188 FSVASDVWSFGVVLYELFTYSDKS  211 (284)
T ss_pred             cChHHHHHHHHHHHHHHhhcCCcC
Confidence            899999999999999999976554

Protein Tyrosine Kinase (PTK) family; Janus kinase 2 (Jak2) and Jak3; catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak2 and Jak3 are members of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as th

>cd05101 PTKc_FGFR2 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 2

Probab=99.91  E-value=2e-23  Score=164.07  Aligned_cols=140  Identities=21%  Similarity=0.285  Sum_probs=111.2

Q ss_pred             hhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------
Q psy7174          25 VNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------   84 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------   84 (188)
                      .+..+++.+|+.+++.+ +||||+++++++        ..+...++++||+.+++|..+..                   
T Consensus        61 ~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  132 (304)
T cd05101          61 EKDLSDLVSEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDIARVPDE  132 (304)
T ss_pred             hHHHHHHHHHHHHHHhhccCCCchheeEEE--------ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCCcc
Confidence            34456788999999999 799999999975        34567899999999999887632                   


Q ss_pred             -----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCc
Q psy7174          85 -----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPE  132 (188)
Q Consensus        85 -----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe  132 (188)
                           .+..++ .|+++||.|||+++       |+|+       +|++|||+++..             ++..|  +|||
T Consensus       133 ~~~~~~~~~~~-~qi~~al~~LH~~givH~dlkp~Nili~~~~~~kl~D~g~~~~~~~~~~~~~~~~~~~~~~y--~aPE  209 (304)
T cd05101         133 QMTFKDLVSCT-YQVARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDVNNIDYYKKTTNGRLPVKW--MAPE  209 (304)
T ss_pred             cccHHHHHHHH-HHHHHHHHHHHHCCeeecccccceEEEcCCCcEEECCCccceecccccccccccCCCCCcee--eCch
Confidence                 234455 79999999999998       6665       599999986522             23458  9999


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         133 LLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       133 ~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      ++.+.. ++.++||||||+++|++++ |..||.+.+..+....+.
T Consensus       210 ~~~~~~-~~~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  253 (304)
T cd05101         210 ALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLK  253 (304)
T ss_pred             hhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHH
Confidence            997755 8999999999999999998 888998776655555443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 2 (FGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR2 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd05050 PTKc_Musk Catalytic domain of the Protein Tyrosine Kinase, Muscle-specific kinase

Probab=99.91  E-value=2.2e-23  Score=162.54  Aligned_cols=138  Identities=17%  Similarity=0.282  Sum_probs=109.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------------------
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------------------   84 (188)
                      +..+.+.+|++++++++||||+++++++        ..+...++++||++++++..+..                     
T Consensus        50 ~~~~~~~~ei~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  121 (288)
T cd05050          50 DMQADFQREAALMAEFDHPNIVKLLGVC--------AVGKPMCLLFEYMAYGDLNEFLRHRSPRAQCSLSHSTSSARKCG  121 (288)
T ss_pred             HHHHHHHHHHHHHHhcCCCchheEEEEE--------cCCCccEEEEecCCCCCHHHHHHHcCcccccccccccccccccc
Confidence            3456788999999999999999999975        44567899999999999877642                     


Q ss_pred             ---------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccC
Q psy7174          85 ---------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTR  128 (188)
Q Consensus        85 ---------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~  128 (188)
                               .+..++ .|++.||+|||+.+       |+|+       +|++|||++...             .+..|  
T Consensus       122 ~~~~~l~~~~~~~~~-~~i~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--  198 (288)
T cd05050         122 LNPLPLSCTEQLCIA-KQVAAGMAYLSERKFVHRDLATRNCLVGENMVVKIADFGLSRNIYSADYYKASENDAIPIRW--  198 (288)
T ss_pred             ccccccCHHHHHHHH-HHHHHHHHHHHhCCeecccccHhheEecCCCceEECccccceecccCccccccCCCccChhh--
Confidence                     234455 79999999999988       5555       599999986421             23358  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      +|||.+.+.. ++.++|+|||||++|+|++ |..||.+.+..+....+
T Consensus       199 ~aPE~~~~~~-~~~~~Dv~slG~il~el~~~~~~p~~~~~~~~~~~~~  245 (288)
T cd05050         199 MPPESIFYNR-YTTESDVWAYGVVLWEIFSYGMQPYYGMAHEEVIYYV  245 (288)
T ss_pred             cCHHHHhcCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            8999987755 8999999999999999997 88888776655544444

Protein Tyrosine Kinase (PTK) family; Muscle-specific kinase (Musk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Musk is a receptor tyr kinase (RTK) containing an extracellular region with four immunoglobulin-like domains and a cysteine-rich cluster, a transmembrane segment, and an intracellular catalytic domain. Musk is expressed and concentrated in the postsynaptic membrane in skeletal muscle. It is essential for the establishment of the neuromuscular junction (NMJ), a peripheral synapse that conveys signals from motor neurons to muscle cells. Agrin, a large proteoglycan released from motor neurons, stimulates M

>cd06609 STKc_MST3_like Catalytic domain of Mammalian Ste20-like protein kinase 3-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=2.4e-23  Score=161.15  Aligned_cols=139  Identities=20%  Similarity=0.246  Sum_probs=112.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGL   98 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl   98 (188)
                      .....+.+|+++++.++|+||+++++++        .++...++++|+++++++...       ...+..++ .|++.||
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~-~ql~~~l  111 (274)
T cd06609          41 DEIEDIQQEIQFLSQCRSPYITKYYGSF--------LKGSKLWIIMEYCGGGSCLDLLKPGKLDETYIAFIL-REVLLGL  111 (274)
T ss_pred             hHHHHHHHHHHHHHHcCCCCeeeeeEEE--------EECCeEEEEEEeeCCCcHHHHHhhcCCCHHHHHHHH-HHHHHHH
Confidence            3446688999999999999999999975        445788999999999998875       33456666 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      .|||+.+       |+|+       ++++|||++.           ..++..|  +|||.+.+.. ++.++|+||+|+++
T Consensus       112 ~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~sDv~slG~il  188 (274)
T cd06609         112 EYLHEEGKIHRDIKAANILLSEEGDVKLADFGVSGQLTSTMSKRNTFVGTPFW--MAPEVIKQSG-YDEKADIWSLGITA  188 (274)
T ss_pred             HHHHhCCcccCCCCHHHEEECCCCCEEEcccccceeecccccccccccCCccc--cChhhhccCC-CCchhhHHHHHHHH
Confidence            9999988       3343       6999999754           2345678  9999998766 89999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHH
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |++++|++||.+.++......+.
T Consensus       189 ~~l~tg~~p~~~~~~~~~~~~~~  211 (274)
T cd06609         189 IELAKGEPPLSDLHPMRVLFLIP  211 (274)
T ss_pred             HHHHhCCCCcccCchHHHHHHhh
Confidence            99999999997766554444433

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of MST3, MST4, STK25, Schizosaccharomyces pombe Nak1 and Sid1, Saccharomyces cerevisiae sporulation-specific protein 1 (SPS1), and related proteins. Nak1 is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Sid1 is a component in the septation initiation network (SIN)

>cd05043 PTK_Ryk Pseudokinase domain of Ryk (Receptor related to tyrosine kinase)

Probab=99.91  E-value=2.1e-23  Score=161.94  Aligned_cols=140  Identities=16%  Similarity=0.152  Sum_probs=110.1

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH----------------HHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS----------------HLRY   88 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~----------------~~~~   88 (188)
                      ....+.+.+|+.++++++||||+++++++.       ..+...+++++|++++++..+..                .+..
T Consensus        49 ~~~~~~~~~e~~~l~~l~h~ni~~~~~~~~-------~~~~~~~~~~~~~~~~~L~~~l~~~~~~~~~~~~~l~~~~~~~  121 (280)
T cd05043          49 EIQVTLLLQESCLLYGLSHQNILPILHVCI-------EDGEPPFVLYPYMNWGNLKLFLQQCRLGEANNPQALSTQQLVH  121 (280)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCeEEEEEe-------cCCCCCEEEEEcCCCCcHHHHHHhccccccccccCCCHHHHHH
Confidence            445577889999999999999999999752       22467899999999999877532                2344


Q ss_pred             HHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCC
Q psy7174          89 LENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYG  141 (188)
Q Consensus        89 ~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~  141 (188)
                      ++ .|++.||+|||+++       |+|+       +|++|||+++..             ++..|  +|||.+.+.. ++
T Consensus       122 i~-~~i~~~l~~LH~~~i~H~di~p~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~y--~apE~~~~~~-~~  197 (280)
T cd05043         122 MA-IQIACGMSYLHKRGVIHKDIAARNCVIDEELQVKITDNALSRDLFPMDYHCLGDNENRPVKW--MALESLVNKE-YS  197 (280)
T ss_pred             HH-HHHHHHHHHHHHCCEeecccCHhhEEEcCCCcEEECCCCCcccccCCceEEeCCCCCcchhc--cCHHHHhcCC-CC
Confidence            55 79999999999988       5555       599999986522             24458  9999997755 89


Q ss_pred             chhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         142 VGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       142 ~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      .++||||+||++|++++ |++||.+.++.+....+
T Consensus       198 ~~~Di~slG~~l~el~~~g~~p~~~~~~~~~~~~~  232 (280)
T cd05043         198 SASDVWSFGVLLWELMTLGQTPYVEIDPFEMAAYL  232 (280)
T ss_pred             chhhHHHhHHHHHHHhcCCCCCcCcCCHHHHHHHH
Confidence            99999999999999998 99999876655444433

Protein Tyrosine Kinase (PTK) family; Receptor related to tyrosine kinase (Ryk); pseudokinase domain. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ryk is a receptor tyr kinase (RTK) containing an extracellular region with two leucine-rich motifs, a transmembrane segment, and an intracellular inactive pseudokinase domain. The extracellular region of Ryk shows homology to the N-terminal domain of Wnt inhibitory factor-1 (WIF) and serves as the ligand (Wnt) binding domain of Ryk. Ryk is expressed in many different tissues both during development and in adults, suggesting a widespread function. It

>cd07846 STKc_CDKL2_3 Catalytic domain of the Serine/Threonine Kinases, Cyclin-Dependent protein Kinase Like 2 and 3

Probab=99.91  E-value=9.2e-24  Score=164.20  Aligned_cols=141  Identities=33%  Similarity=0.550  Sum_probs=113.9

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|+++++.++||||+++++++        ..+...++++||+.++++..+        ...+..++ .|++.||
T Consensus        43 ~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~~i~~~l  113 (286)
T cd07846          43 VKKIAMREIRMLKQLRHENLVNLIEVF--------RRKKRLYLVFEFVDHTVLDDLEKYPNGLDESRVRKYL-FQILRGI  113 (286)
T ss_pred             hhHHHHHHHHHHHhcCCcchhhHHHhc--------ccCCeEEEEEecCCccHHHHHHhccCCCCHHHHHHHH-HHHHHHH
Confidence            346688999999999999999999975        456788999999999988765        24455666 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      .|||+.+       |+|+       +|++|||++.           ..++..|  +|||.+.+...++.++|+||+|+++
T Consensus       114 ~~LH~~~i~h~~l~p~ni~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slG~~l  191 (286)
T cd07846         114 EFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYTDYVATRWY--RAPELLVGDTKYGRAVDIWAVGCLV  191 (286)
T ss_pred             HHHHHCCccccCCCHHHEEECCCCcEEEEeeeeeeeccCCccccCcccceeec--cCcHHhccccccCchHhHHHHHHHH
Confidence            9999988       4444       6999999754           2356678  9999987644478899999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +++++|++||.+....+....+...
T Consensus       192 ~el~~g~~~~~~~~~~~~~~~~~~~  216 (286)
T cd07846         192 TEMLTGEPLFPGDSDIDQLYHIIKC  216 (286)
T ss_pred             HHHHcCCCCCCCCchHHHHHHHHHH
Confidence            9999999999887766655555543

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like 2 (CDKL2) and CDKL3 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL2 and CDKL3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKL2, also called p56 KKIAMRE, is expressed in testis, kidney, lung, and brain. It functions mainly in mature neurons and plays an important role in learning and memory. Inactivation of CDKL3, also called NKI

>KOG0671|consensus

Probab=99.91  E-value=6.8e-25  Score=171.10  Aligned_cols=166  Identities=20%  Similarity=0.276  Sum_probs=129.5

Q ss_pred             cccccc--cCC---ccccccccccchhhhhHHHHHHHHHHhCC--CCC----eeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ--QSK---WSPNTPMARCDVNVETQAKAEGKQDRRLD--YAN----IIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~--~~~---~~~~~~i~~~~~~~~~~~~~E~~il~~l~--h~n----iv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||+|.+  .++   ++++|.++. ..+.++.++-|+++|+++.  .|+    ++.+.++|        --.++.|+++|.
T Consensus       102 FGkV~ec~D~~~~~~vAlKIik~-V~kYreAa~iEi~vLqki~~~DP~g~~rcv~m~~wF--------dyrghiCivfel  172 (415)
T KOG0671|consen  102 FGKVVECWDRETKEHVALKIIKN-VDKYREAALIEIEVLQKINESDPNGKFRCVQMRDWF--------DYRGHICIVFEL  172 (415)
T ss_pred             ccceEEEeecCCCceehHHHHHH-HHHHhhHHHHHHHHHHHHHhcCCCCceEEEeeehhh--------hccCceEEEEec
Confidence            677777  222   333443322 3455566788999999994  233    67777765        235788999998


Q ss_pred             cccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------------------------E
Q psy7174          74 FTKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------------------------K  110 (188)
Q Consensus        74 ~~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------------------------l  110 (188)
                      +.....+-+         ..+++.+. +|+++++++||+.+       |+||                           +
T Consensus       173 lG~S~~dFlk~N~y~~fpi~~ir~m~-~QL~~sv~fLh~~kl~HTDLKPENILfvss~~~~~~~~k~~~~~~r~~ks~~I  251 (415)
T KOG0671|consen  173 LGLSTFDFLKENNYIPFPIDHIRHMG-YQLLESVAFLHDLKLTHTDLKPENILFVSSEYFKTYNPKKKVCFIRPLKSTAI  251 (415)
T ss_pred             cChhHHHHhccCCccccchHHHHHHH-HHHHHHHHHHHhcceeecCCChheEEEeccceEEEeccCCccceeccCCCcce
Confidence            864444433         56788888 99999999999988       7777                           3


Q ss_pred             EEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         111 KFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       111 kl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      |++|||.++        .+.|..|  +|||++++.+ ++.++||||+||||.|+.+|...|++.++.+.+..+.+.+|++
T Consensus       252 ~vIDFGsAtf~~e~hs~iVsTRHY--RAPEViLgLG-wS~pCDvWSiGCIL~ElytG~~LFqtHen~EHLaMMerIlGp~  328 (415)
T KOG0671|consen  252 KVIDFGSATFDHEHHSTIVSTRHY--RAPEVILGLG-WSQPCDVWSIGCILVELYTGETLFQTHENLEHLAMMERILGPI  328 (415)
T ss_pred             EEEecCCcceeccCcceeeecccc--CCchheeccC-cCCccCceeeeeEEEEeeccceecccCCcHHHHHHHHHhhCCC
Confidence            899999865        4679999  9999999987 9999999999999999999999999999999998888888854


Q ss_pred             C
Q psy7174         183 S  183 (188)
Q Consensus       183 ~  183 (188)
                      |
T Consensus       329 P  329 (415)
T KOG0671|consen  329 P  329 (415)
T ss_pred             c
Confidence            4

>cd06652 STKc_MEKK2 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 2

Probab=99.91  E-value=3.1e-23  Score=159.78  Aligned_cols=138  Identities=24%  Similarity=0.328  Sum_probs=108.8

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++||||+++++++..      ......++++||++++++..+.        ..+..++ .|++.||
T Consensus        47 ~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~~l~~~l  119 (265)
T cd06652          47 EVNALECEIQLLKNLLHERIVQYYGCLRD------PMERTLSIFMEHMPGGSIKDQLKSYGALTENVTRKYT-RQILEGV  119 (265)
T ss_pred             HHHHHHHHHHHHHhcCCCCeeeEEeEecc------CCCceEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHH
Confidence            34578889999999999999999997521      2234678999999999998752        2345566 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc--------------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR--------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .|||+.+       |.|+       +|++|||++.              ..++..|  +|||.+.+.. ++.++|+||||
T Consensus       120 ~~lH~~~i~H~dl~p~nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~slG  196 (265)
T cd06652         120 SYLHSNMIVHRDIKGANILRDSVGNVKLGDFGASKRLQTICLSGTGMKSVTGTPYW--MSPEVISGEG-YGRKADIWSVG  196 (265)
T ss_pred             HHHHhCCEecCCCCHHHEEecCCCCEEECcCccccccccccccccccccCCCCccc--cChhhhcCCC-CCcchhHHHHH
Confidence            9999988       4444       6999999754              2356678  9999987755 89999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                      |++|++++|++||.+........+
T Consensus       197 ~il~el~~g~~p~~~~~~~~~~~~  220 (265)
T cd06652         197 CTVVEMLTEKPPWAEFEAMAAIFK  220 (265)
T ss_pred             HHHHHHhhCCCCCCccchHHHHHH
Confidence            999999999999976654444333

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 2 (MEKK2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK2 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK2 also activates ERK1/2, c-Jun N-terminal kinase (JNK) and p38 through their re

>cd07833 STKc_CDKL Catalytic domain of Cyclin-Dependent protein Kinase Like Serine/Threonine Kinases

Probab=99.91  E-value=8.7e-24  Score=164.38  Aligned_cols=144  Identities=34%  Similarity=0.507  Sum_probs=116.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|++++++++|+||+++++++        ..+...++++||+.++.+..+        ...+..++ .|++.|
T Consensus        42 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~-~~i~~~  112 (288)
T cd07833          42 DVKKTALREVKVLRQLRHENIVNLKEAF--------RRKGRLYLVFEYVERTLLELLEASPGGLPPDAVRSYI-WQLLQA  112 (288)
T ss_pred             cchhHHHHHHHHHHhcCCCCeeehhheE--------EECCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHH
Confidence            3456789999999999999999999976        346678999999999887754        34556666 899999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc------------ccccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      |.|||+.+       |.|+       +|++|||++.            ..++..|  +|||.+.....++.++|+||+|+
T Consensus       113 l~~LH~~~i~H~dl~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~--~~PE~~~~~~~~~~~~Dv~slG~  190 (288)
T cd07833         113 IAYCHSHNIIHRDIKPENILVSESGVLKLCDFGFARALRARPASPLTDYVATRWY--RAPELLVGDTNYGKPVDVWAIGC  190 (288)
T ss_pred             HHHHHHCCeecCCCCHHHeEECCCCCEEEEeeecccccCCCccccccCcccccCC--cCCchhcCCCCcCchhhHHHHHH
Confidence            99999988       4444       6999999743            2345678  99999987634899999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy7174         152 IICELLLKAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       152 il~el~~g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      ++|++++|++||.+.+..+.+..+...++
T Consensus       191 ~l~~l~~g~~~~~~~~~~~~~~~~~~~~~  219 (288)
T cd07833         191 IMAELLDGEPLFPGDSDIDQLYLIQKCLG  219 (288)
T ss_pred             HHHHHHhCCCCCCCCCHHHHHHHHHHHhC
Confidence            99999999999988877666666554443

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase like (CDKL) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDKL subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDKL1-5 and similar proteins. Some CDKLs, like CDKL1 and CDKL3, may be implicated in transformation and others, like CDKL3 and CDKL5, are associated with mental retardation when impaired. CDKL2 plays a role in learning

>cd06624 STKc_ASK Catalytic domain of the Protein Serine/Threonine Kinase, Apoptosis signal-regulating kinase

Probab=99.91  E-value=2.2e-23  Score=160.80  Aligned_cols=151  Identities=22%  Similarity=0.272  Sum_probs=115.4

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    ...++|.+........+.+.+|++++++++|+||+++++++        ..+...++++||+++++|
T Consensus        21 ~g~v~~~~~~~~~~~v~~k~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L   92 (268)
T cd06624          21 YGIVYAARDLSTQVRIAIKEIPERDSRYVQPLHEEIALHSYLKHRNIVQYLGSD--------SENGFFKIFMEQVPGGSL   92 (268)
T ss_pred             ceEEEEeEecCCCcEEEEEEecCCCHHHHHHHHHHHHHHHhcCCCCeeeeeeee--------ccCCEEEEEEecCCCCCH
Confidence            677776 21    12234444444445567889999999999999999999975        445678999999999999


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc-----------ccc
Q psy7174          80 ARFY-----------SHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        80 ~~~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~-----------~~~  122 (188)
                      ..+.           ..+..++ .|++.||.|||+.+       |+|+        +|++|||++.           ..+
T Consensus        93 ~~~l~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~i~h~dl~p~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~  171 (268)
T cd06624          93 SALLRSKWGPLKDNEQTIIFYT-KQILEGLKYLHDNQIVHRDIKGDNVLVNTYSGVVKISDFGTSKRLAGINPCTETFTG  171 (268)
T ss_pred             HHHHHHhcccCCCcHHHHHHHH-HHHHHHHHHHHHCCEeecCCCHHHEEEcCCCCeEEEecchhheecccCCCccccCCC
Confidence            8752           2234455 79999999999988       4443        6899999753           235


Q ss_pred             cccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      +..|  +|||.+... ..++.++|+||+|+++|++++|++||...
T Consensus       172 ~~~~--~aPE~~~~~~~~~~~~~Dv~slGvvl~~l~~g~~p~~~~  214 (268)
T cd06624         172 TLQY--MAPEVIDKGPRGYGAPADIWSLGCTIVEMATGKPPFIEL  214 (268)
T ss_pred             Cccc--cChhhhccccccCCchhhhHHHHHHHHHHHhCCCCCccc
Confidence            6788  999998653 23788999999999999999999999653

Serine/threonine kinases (STKs), Apoptosis signal-regulating kinase (ASK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ASK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Subfamily members are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) and include ASK1, ASK2, and MAPKKK15. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. ASK1 (also called MAPKKK5) functions in the c-Jun N-terminal kina

>cd08220 STKc_Nek8 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 8

Probab=99.91  E-value=3e-23  Score=158.69  Aligned_cols=142  Identities=24%  Similarity=0.289  Sum_probs=113.8

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQI   94 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi   94 (188)
                      ....+.+.+|++++++++|||++++++.+        ..+...++++||++++++..+.          ..+..++ .|+
T Consensus        40 ~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~i  110 (256)
T cd08220          40 KDERLAAQNECQVLKLLSHPNIIEYYENF--------LEDKALMIVMEYAPGGTLAEYIQKRCNSLLDEDTILHFF-VQI  110 (256)
T ss_pred             cHHHHHHHHHHHHHhhCCCCchhheeeeE--------ecCCEEEEEEecCCCCCHHHHHHHhcccCCCHHHHHHHH-HHH
Confidence            34456788999999999999999999864        4466789999999999987752          3345566 799


Q ss_pred             HHHHHHHhhcC-------CCC--------eEEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          95 LEGLQALKSSM-------PAL--------LKKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~--------ilkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      +.||.|||+++       |+|        .+|++|||++.          ..++..|  +|||.+.... ++.++|+||+
T Consensus       111 ~~~l~~lh~~~i~h~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~sl  187 (256)
T cd08220         111 LLALHHVHTKLILHRDLKTQNILLDKHKMVVKIGDFGISKILSSKSKAYTVVGTPCY--ISPELCEGKP-YNQKSDIWAL  187 (256)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEEccCCCceecCCCccccccccCCcc--cCchhccCCC-CCcccchHHH
Confidence            99999999988       333        46999999754          3456678  9999997755 8899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |++++++++|+.||.+.+......++...
T Consensus       188 G~~l~~l~~~~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08220         188 GCVLYELASLKRAFEAANLPALVLKIMSG  216 (256)
T ss_pred             HHHHHHHHhCCCCcccCchHHHHHHHHhc
Confidence            99999999999999877665555555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 8 (Nek8) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek8 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek8 contains an N-terminal kinase catalytic domain and a C-terminal RCC1 (regulator of chromosome condensation) domain. A double point mutation in Nek8 causes cystic kidney disease in mice that genetically resembles human autosomal recessive polycystic kidney disease (ARPKD). Nek8 is also associated with

>cd07842 STKc_CDK8_like Catalytic domain of Cyclin-Dependent protein Kinase 8-like Serine/Threonine Kinases

Probab=99.91  E-value=1e-23  Score=166.09  Aligned_cols=153  Identities=35%  Similarity=0.558  Sum_probs=116.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH------------HHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF------------YSHLRYLENQQ   93 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~------------~~~~~~~~~~q   93 (188)
                      ...+.+.+|+.++++++||||+++++++..      ..+...++++||+.++.+...            +..+..++ .|
T Consensus        44 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~-~q  116 (316)
T cd07842          44 GISQSACREIALLRELKHENVVSLVEVFLE------HADKSVYLLFDYAEHDLWQIIKFHRQAKRVSIPPSMVKSLL-WQ  116 (316)
T ss_pred             CccHHHHHHHHHHHhcCCCCccceEEEEeC------CCCceEEEEEeCCCcCHHHHHHhhccCCCcCcCHHHHHHHH-HH
Confidence            344678899999999999999999998622      233678999999986554332            23455666 79


Q ss_pred             HHHHHHHHhhcC--------------C----CCeEEEecCCcccc--------------cccccccCCCCccccccCCCC
Q psy7174          94 ILEGLQALKSSM--------------P----ALLKKFVGIGIGRH--------------VCTLYCTRGAPELLFGARMYG  141 (188)
Q Consensus        94 i~~gl~~lH~~~--------------~----~~ilkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~~~  141 (188)
                      ++.||.|||+.+              .    +..+|++|||++..              .++..|  +|||.+.+...++
T Consensus       117 i~~~l~~lH~~~i~h~dlkp~Nil~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~  194 (316)
T cd07842         117 ILNGVHYLHSNWVLHRDLKPANILVMGEGPERGVVKIGDLGLARLFNAPLKPLADLDPVVVTIWY--RAPELLLGARHYT  194 (316)
T ss_pred             HHHHHHHHHhCCEeeCCCCHHHEEEcCCCCccceEEECCCccccccCCCcccccccCCccccccc--cCHHHHhCCCCCC
Confidence            999999999988              2    45579999997542              345678  9999987655588


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHhhcCCCCCCCC
Q psy7174         142 VGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       142 ~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~~~~~~p~~~~~  187 (188)
                      .++|+||+||++++|++|++||.+.+.         ...+..+...++.|.+..|
T Consensus       195 ~~~Dv~slG~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~  249 (316)
T cd07842         195 KAIDIWAIGCIFAELLTLEPIFKGREAKIKKSNPFQRDQLERIFEVLGTPTEKDW  249 (316)
T ss_pred             cHHHHHHHHHHHHHHHhcCCCCcCCcccccccchhHHHHHHHHHHHhCCCchhHH
Confidence            999999999999999999999976543         2345666666666655444

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 8 (CDK8)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK8-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK8, CDC2L6, and similar proteins. CDK8 functions as a negative or positive regulator of transcription, depending on the scenario. Together with its regulator, cyclin C, it reversibly associates with the

>cd07831 STKc_MOK Catalytic domain of the Serine/Threonine Kinase, MAPK/MAK/MRK Overlapping Kinase

Probab=99.91  E-value=1.8e-23  Score=162.17  Aligned_cols=170  Identities=26%  Similarity=0.430  Sum_probs=122.4

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+++. .........+|+.+++++. |+||+++++++..      ......++++||+.++
T Consensus        12 ~~~v~~~~~~~~~~~~aik~~~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~~   85 (282)
T cd07831          12 FSEVLKAQSRKTGKYYAIKCMKKHFKSLEQVNNLREIQALRRLSPHPNILRLIEVLFD------RKTGRLALVFELMDMN   85 (282)
T ss_pred             cceEEEEEEcCCCcEEEEEEehhccCCchhhhHHHHHHHHhhcCCCCCccceEEEEec------CCCCcEEEEEecCCcc
Confidence            677777 2    223334433332 1222234467999999886 9999999998621      1226789999999865


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc----------ccccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR----------HVCTLYC  126 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~----------~~~~~~y  126 (188)
                      .+..+        ...+..++ .|++.||.|||+.+       |+|+      +|++|||++.          ..++..|
T Consensus        86 l~~~l~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~~i~H~dl~p~ni~l~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y  164 (282)
T cd07831          86 LYELIKGRKRPLPEKRVKSYM-YQLLKSLDHMHRNGIFHRDIKPENILIKDDILKLADFGSCRGIYSKPPYTEYISTRWY  164 (282)
T ss_pred             HHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCceecccCHHHEEEcCCCeEEEecccccccccCCCcCCCCCCccc
Confidence            44333        23456666 79999999999998       4444      6999999754          2356778


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                        +|||.+.....++.++|+||+||++|+|++|.+||.+.+..+....+....+.++
T Consensus       165 --~aPE~~~~~~~~~~~~Di~slGv~l~el~~~~~p~~~~~~~~~~~~~~~~~~~~~  219 (282)
T cd07831         165 --RAPECLLTDGYYGPKMDIWAVGCVFFEILSLFPLFPGTNELDQIAKIHDVLGTPD  219 (282)
T ss_pred             --CChhHhhcCCCCCcchhHHHHHHHHHHHHcCCcCCCCCCHHHHHHHHHHHcCCCC
Confidence              9999875544478899999999999999999999999888887777766665544

Serine/Threonine Kinases (STKs), MAPK/MAK/MRK Overlapping Kinase (MOK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MOK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MOK, also called Renal tumor antigen 1 (RAGE-1), is widely expressed and is enriched in testis, kidney, lung, and brain. It is expressed in approximately 50% of renal cell carcinomas (RCC) and is a potential target for immunotherapy. MOK is stabilized by its association with the HSP90 molecular chaperone. It is induced by the transcription factor Cdx2 and may be involved in regulating intestinal epithelial development and differentiation.

>cd08218 STKc_Nek1 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 1

Probab=99.91  E-value=3.1e-23  Score=158.78  Aligned_cols=141  Identities=19%  Similarity=0.248  Sum_probs=113.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQIL   95 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~   95 (188)
                      ...+++.+|++++++++||||+++++++        ......++++||+.++++....          ..+..++ .|++
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~  111 (256)
T cd08218          41 KEREESRKEVAVLSNMKHPNIVQYQESF--------EENGNLYIVMDYCEGGDLYKKINAQRGVLFPEDQILDWF-VQIC  111 (256)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeEeee--------cCCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHH-HHHH
Confidence            4456789999999999999999999975        4466889999999999887642          2344556 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .||.|||+.+       |+|+       ++++|||++.           ..++..|  +|||.+.+.. ++.++|+||+|
T Consensus       112 ~~l~~lh~~~i~h~~l~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-~~~~~Dv~slG  188 (256)
T cd08218         112 LALKHVHDRKILHRDIKSQNIFLTKDGTIKLGDFGIARVLNSTVELARTCIGTPYY--LSPEICENRP-YNNKSDIWALG  188 (256)
T ss_pred             HHHHHHHhCCEecCCCCHHHEEEcCCCCEEEeeccceeecCcchhhhhhccCCccc--cCHHHhCCCC-CCCccchhHHH
Confidence            9999999988       4444       6999999754           2356778  9999987755 88999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+++++++|+.||...+..+....+...
T Consensus       189 ~i~~~l~~g~~~~~~~~~~~~~~~~~~~  216 (256)
T cd08218         189 CVLYEMCTLKHAFEAGNMKNLVLKIIRG  216 (256)
T ss_pred             HHHHHHHcCCCCccCCCHHHHHHHHhcC
Confidence            9999999999999877666665555443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 1 (Nek1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek1 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek1 is associated with centrosomes throughout the cell cycle. It is involved in the formation of primary cilium and in the maintenance of centrosomes. It cycles through the nucleus and may be capable of relaying signals between the cilium and the nucleus. Nek1 is implicated in the development of polycysti

>cd07837 STKc_CdkB_plant Catalytic domain of the Serine/Threonine Kinase, Plant B-type Cyclin-Dependent protein Kinase

Probab=99.91  E-value=2.3e-23  Score=162.76  Aligned_cols=176  Identities=29%  Similarity=0.511  Sum_probs=126.4

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.++..  .......+.+|+.++++++ ||||+++++++...   ........++++||+.+
T Consensus        14 ~g~vy~~~~~~~~~~v~lK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~~---~~~~~~~~~lv~e~~~~   90 (295)
T cd07837          14 YGKVYKARDKNTGKLVALKKTRLEMDEEGIPPTALREISLLQMLSESIYIVRLLDVEHVE---EKNGKPSLYLVFEYLDS   90 (295)
T ss_pred             CeEEEEEEECCCCcEEEEEeehhhccccCCchHHHHHHHHHHHccCCCCccceeeeEeec---CCCCCceEEEEeeccCc
Confidence            678887 2    222234433322  1223456889999999996 69999999975221   11112237999999986


Q ss_pred             ccHHHH-------------HHHHHHHHHHHHHHHHHHHhhcC-------CC--------CeEEEecCCcccc--------
Q psy7174          77 TTKARF-------------YSHLRYLENQQILEGLQALKSSM-------PA--------LLKKFVGIGIGRH--------  120 (188)
Q Consensus        77 ~~l~~~-------------~~~~~~~~~~qi~~gl~~lH~~~-------~~--------~ilkl~dfg~~~~--------  120 (188)
                       ++..+             +..+..++ .|+++||.|||+.+       |+        ..+|++|||++..        
T Consensus        91 -~l~~~~~~~~~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~~i~H~dl~~~nil~~~~~~~~kl~dfg~~~~~~~~~~~~  168 (295)
T cd07837          91 -DLKKFMDSNGRGPGRPLPAKTIKSFM-YQLLKGVAHCHKHGVMHRDLKPQNLLVDKQKGLLKIADLGLGRAFSIPVKSY  168 (295)
T ss_pred             -CHHHHHHHhcccCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCChHHEEEecCCCeEEEeecccceecCCCcccc
Confidence             45443             23455566 79999999999998       33        3479999997542        


Q ss_pred             ---cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         121 ---VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       121 ---~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                         .++..|  +|||.+.+...++.++|+||+|+++|+|++|.+||.+.++...+..+.+..+.|....|
T Consensus       169 ~~~~~~~~~--~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  236 (295)
T cd07837         169 THEIVTLWY--RAPEVLLGSTHYSTPVDIWSVGCIFAEMSRKQPLFPGDSELQQLLHIFKLLGTPTEQVW  236 (295)
T ss_pred             CCcccccCC--CChHHhhCCCCCCchHHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHhCCCChhhC
Confidence               345678  99998866445789999999999999999999999999888888888877776665554

Serine/Threonine Kinases (STKs), Plant B-type Cyclin-Dependent protein Kinase (CdkB) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CdkB subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. The plant-specific B-type CDKs are expressed from the late S to the M phase of the cell cycle. They are characterized by the cyclin binding motif PPT[A/T]LRE. They play a role in controlling mitosis and integrating developm

>cd06651 STKc_MEKK3 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 3

Probab=99.91  E-value=3e-23  Score=160.07  Aligned_cols=139  Identities=24%  Similarity=0.363  Sum_probs=109.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++||||+++++++..      ..+...++++||++++++....        .....++ .|++.||
T Consensus        47 ~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~~~l~~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l  119 (266)
T cd06651          47 EVSALECEIQLLKNLQHERIVQYYGCLRD------RAEKTLTIFMEYMPGGSVKDQLKAYGALTESVTRKYT-RQILEGM  119 (266)
T ss_pred             HHHHHHHHHHHHHHcCCCCeeeEEEEEEc------CCCCEEEEEEeCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHH
Confidence            34568889999999999999999997521      2245678999999999987652        3345566 8999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc--------------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR--------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .|||+.+       |+|+       +|++|||++.              ..++..|  +|||.+.+.. ++.++|+||+|
T Consensus       120 ~~LH~~~i~H~~l~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~slG  196 (266)
T cd06651         120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRLQTICMSGTGIRSVTGTPYW--MSPEVISGEG-YGRKADVWSLG  196 (266)
T ss_pred             HHHHhCCeeeCCCCHHHEEECCCCCEEEccCCCccccccccccCCccccCCccccc--cCHHHhCCCC-CCchhhhHHHH
Confidence            9999988       4444       6999999754              2355678  9999997754 89999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      |++|++++|++||...........+
T Consensus       197 ~i~~el~~g~~pf~~~~~~~~~~~~  221 (266)
T cd06651         197 CTVVEMLTEKPPWAEYEAMAAIFKI  221 (266)
T ss_pred             HHHHHHHHCCCCccccchHHHHHHH
Confidence            9999999999999876554444333

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK3 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates the MAPK kinase MEK5 (or MKK5), which in turn phosphorylates and activates extracellular signal-regulated kinase 5 (ERK5). The ERK5 cascade plays roles in promoting cell proliferation, differentiation, neuronal survival, and neuroprotection. MEKK3 plays an essential role in embryonic angiogenesis and early heart development

>KOG0696|consensus

Probab=99.91  E-value=9.4e-25  Score=172.54  Aligned_cols=162  Identities=18%  Similarity=0.163  Sum_probs=130.1

Q ss_pred             ccccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           4 VCFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         4 ~~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      .||+|..     +...-++|.+++-   ..++.+-.+.|-++|..-. -|.+++++++|        +.-+.+|.||||+
T Consensus       361 SFGKVlLaerkgtdELyAiKiLkKDViiQdDDvectm~EKrvLAL~~kppFL~qlHScF--------QTmDRLyFVMEyv  432 (683)
T KOG0696|consen  361 SFGKVLLAERKGTDELYAIKILKKDVIIQDDDVECTMVEKRVLALPGKPPFLVQLHSCF--------QTMDRLYFVMEYV  432 (683)
T ss_pred             ccceeeeecccCcchhhhhhhhccceeeecCcccceehhhhheecCCCCchHHHHHHHh--------hhhhheeeEEEEe
Confidence            3788886     2223347777772   3344555678999988775 68999999975        6667899999999


Q ss_pred             ccccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcc-----------ccc
Q psy7174          75 TKTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIG-----------RHV  121 (188)
Q Consensus        75 ~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~-----------~~~  121 (188)
                      .||+|-...        ....+++ .+|+.||-+||+++       .+|+       +||+|||+.           +++
T Consensus       433 nGGDLMyhiQQ~GkFKEp~AvFYA-aEiaigLFFLh~kgIiYRDLKLDNvmLd~eGHiKi~DFGmcKEni~~~~TTkTFC  511 (683)
T KOG0696|consen  433 NGGDLMYHIQQVGKFKEPVAVFYA-AEIAIGLFFLHSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIFDGVTTKTFC  511 (683)
T ss_pred             cCchhhhHHHHhcccCCchhhhhh-HHHHHHhhhhhcCCeeeeeccccceEeccCCceEeeecccccccccCCcceeeec
Confidence            999986542        3345566 79999999999999       3344       699999973           378


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||+-|  +|||++...+ |+..+|+||+|+++|||+.|++||.|++..+.++.|-+
T Consensus       512 GTPdY--iAPEIi~YqP-YgksvDWWa~GVLLyEmlaGQpPFdGeDE~elF~aI~e  564 (683)
T KOG0696|consen  512 GTPDY--IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQPPFDGEDEDELFQAIME  564 (683)
T ss_pred             CCCcc--cccceEEecc-cccchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHH
Confidence            99999  9999999877 99999999999999999999999999999888888854

>cd08229 STKc_Nek7 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 7

Probab=99.91  E-value=1.4e-23  Score=161.58  Aligned_cols=129  Identities=22%  Similarity=0.372  Sum_probs=106.5

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQ   93 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~q   93 (188)
                      ...+++.+|+++++.++||||+++++++        ..+...++++||+.++++..+.            ..+..++ .|
T Consensus        44 ~~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~~  114 (267)
T cd08229          44 KARADCIKEIDLLKQLNHPNVIKYYASF--------IEDNELNIVLELADAGDLSRMIKHFKKQKRLIPEKTVWKYF-VQ  114 (267)
T ss_pred             HHHHHHHHHHHHHHHccCCchhhhhhee--------EeCCeEEEEEEecCCCCHHHHHHHhhccCCCCCHHHHHHHH-HH
Confidence            3456788999999999999999999975        4467889999999999987652            2344556 79


Q ss_pred             HHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          94 ILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        94 i~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ++.||.|||+.+       |+|+       ++++|||++.           ..++..|  +|||.+.+.. ++.++|+||
T Consensus       115 i~~~l~~LH~~~i~H~dl~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~--~ape~~~~~~-~~~~~Dv~s  191 (267)
T cd08229         115 LCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYY--MSPERIHENG-YNFKSDIWS  191 (267)
T ss_pred             HHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEECcchhhhccccCCcccccccCCcCc--cCHHHhcCCC-ccchhhHHH
Confidence            999999999988       5555       6999999743           2466778  9999987755 889999999


Q ss_pred             HHHHHHHHHhCCCCCCCC
Q psy7174         149 VGCIICELLLKAPFLPGE  166 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~  166 (188)
                      +|+++|++++|..||.+.
T Consensus       192 lG~il~~l~~g~~p~~~~  209 (267)
T cd08229         192 LGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             HHHHHHHHHhCCCCcccc
Confidence            999999999999999654

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 7 (Nek7) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek7 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek7 is required for mitotic spindle formation and cytokinesis. It is enriched in the centrosome and is critical for microtubule nucleation. Nek7 is activated by Nek9 during mitosis, and may regulate the p70 ribosomal S6 kinase.

>cd05040 PTKc_Ack_like Catalytic domain of the Protein Tyrosine Kinase, Activated Cdc42-associated kinase

Probab=99.91  E-value=3.7e-23  Score=158.49  Aligned_cols=147  Identities=20%  Similarity=0.215  Sum_probs=114.2

Q ss_pred             cccccccch-hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HH
Q psy7174          17 NTPMARCDV-NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SH   85 (188)
Q Consensus        17 ~~~i~~~~~-~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~   85 (188)
                      +|.++.... ...+++.+|++++++++||||+++++.+        .. ...++++||+.++++....          ..
T Consensus        28 iK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~-~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~   98 (257)
T cd05040          28 VKCLKSDKLSDIMDDFLKEAAIMHSLDHENLIRLYGVV--------LT-HPLMMVTELAPLGSLLDRLRKDALGHFLIST   98 (257)
T ss_pred             EeecCCcccHHHHHHHHHHHHHHhhcCCCCccceeEEE--------cC-CeEEEEEEecCCCcHHHHHHhcccccCcHHH
Confidence            444443333 5567889999999999999999999974        22 6789999999999988752          23


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc--------------ccccccCCCCcccccc
Q psy7174          86 LRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV--------------CTLYCTRGAPELLFGA  137 (188)
Q Consensus        86 ~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~--------------~~~~y~~~aPe~~~~~  137 (188)
                      +..++ .|+++||.|||+.+       |+|+       +|++|||++...              ++..|  +|||.+...
T Consensus        99 ~~~~~-~qi~~~L~~lH~~~i~H~di~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~~pE~~~~~  175 (257)
T cd05040          99 LCDYA-VQIANGMRYLESKRFIHRDLAARNILLASDDKVKIGDFGLMRALPQNEDHYVMEEHLKVPFAW--CAPESLRTR  175 (257)
T ss_pred             HHHHH-HHHHHHHHHHHhCCccccccCcccEEEecCCEEEeccccccccccccccceecccCCCCCcee--cCHHHhccc
Confidence            34455 79999999999998       5555       699999976532              34568  999998775


Q ss_pred             CCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         138 RMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       138 ~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      . ++.++|+||+||++++|++ |..||...+..+....+.
T Consensus       176 ~-~~~~~Di~slG~~l~el~t~g~~p~~~~~~~~~~~~~~  214 (257)
T cd05040         176 T-FSHASDVWMFGVTLWEMFTYGEEPWAGLSGSQILKKID  214 (257)
T ss_pred             C-cCchhhhHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHH
Confidence            5 8999999999999999998 999997766655544443

Protein Tyrosine Kinase (PTK) family; Activated Cdc42-associated kinase (Ack) subfamily; catalytic (c) domain. Ack subfamily members include Ack1, thirty-eight-negative kinase 1 (Tnk1), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Ack subfamily members are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal catalytic domain, an SH3 domain, a Cdc42-binding CRIB domain, and a proline-rich region. They are mainly expressed in brain and skeletal tissues and are involved in the regulation of cell adhesion and growth, receptor degradation, and axonal guidance. Ack1 is also associated with and

>cd06607 STKc_TAO Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids proteins

Probab=99.91  E-value=2.3e-23  Score=164.00  Aligned_cols=135  Identities=21%  Similarity=0.279  Sum_probs=106.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      +..+++.+|+++++.++||||+++.++|        .++...++++||+.++.+..+        ...+..++ .|++.|
T Consensus        57 ~~~~~~~~Ei~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~~~-~ql~~~  127 (307)
T cd06607          57 EKWQDIIKEVRFLQQLRHPNTIEYKGCY--------LREHTAWLVMEYCLGSASDILEVHKKPLQEVEIAAIC-HGALQG  127 (307)
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEE--------EeCCeEEEEHHhhCCCHHHHHHHcccCCCHHHHHHHH-HHHHHH
Confidence            3446788999999999999999999986        445678999999986543332        23455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc-------ccccccccCCCCccccc--cCCCCchhHHHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~  154 (188)
                      |.|||+.+       |+|+       +|++|||++.       ..++..|  +|||++..  ...++.++||||+|+++|
T Consensus       128 L~~LH~~~i~H~dl~p~nIl~~~~~~~kL~dfg~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~sDv~s~G~il~  205 (307)
T cd06607         128 LAYLHSHERIHRDIKAGNILLTEPGTVKLADFGSASLVSPANSFVGTPYW--MAPEVILAMDEGQYDGKVDVWSLGITCI  205 (307)
T ss_pred             HHHHHHCCceecCCCcccEEECCCCCEEEeecCcceecCCCCCccCCccc--cCceeeeccCCCCCCcccchHHHHHHHH
Confidence            99999987       6666       5999999764       3456788  99998742  234788999999999999


Q ss_pred             HHHhCCCCCCCCChHHH
Q psy7174         155 ELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       155 el~~g~~pf~~~~~~~~  171 (188)
                      ++++|++||.+.+....
T Consensus       206 el~tg~~p~~~~~~~~~  222 (307)
T cd06607         206 ELAERKPPLFNMNAMSA  222 (307)
T ss_pred             HHHcCCCCCCCccHHHH
Confidence            99999999977655443

Serine/threonine kinases (STKs), thousand-and-one amino acids (TAO) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. They activate the MAPKs, p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activating the respective MAP/ERK kinases (MEKs, also known as MKKs or MAPKKs), MEK3/MEK6 and MKK4/MKK7. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Vertebrates contain three TAO subfamily

>cd05055 PTKc_PDGFR Catalytic domain of the Protein Tyrosine Kinases, Platelet Derived Growth Factor Receptors

Probab=99.91  E-value=4.4e-23  Score=162.28  Aligned_cols=133  Identities=20%  Similarity=0.251  Sum_probs=107.6

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQI   94 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi   94 (188)
                      ...+.+.+|+++++++ +||||+++++++        ......++++||+++++|..+.          ..+..++ .|+
T Consensus        80 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~l~~~~~~~i~-~~i  150 (302)
T cd05055          80 SEREALMSELKIMSHLGNHENIVNLLGAC--------TIGGPILVITEYCCYGDLLNFLRRKRESFLTLEDLLSFS-YQV  150 (302)
T ss_pred             HHHHHHHHHHHHHHhccCCCCcceEEEEE--------ecCCceEEEEEcCCCCcHHHHHHhCCCCCCCHHHHHHHH-HHH
Confidence            3446788999999999 799999999975        3456789999999999987652          3445566 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCCchhHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      +.||.|||+++       |+|+       +|++|||++..             .++..|  +|||.+.... ++.++|+|
T Consensus       151 ~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Diw  227 (302)
T cd05055         151 AKGMAFLASKNCIHRDLAARNVLLTHGKIVKICDFGLARDIMNDSNYVVKGNARLPVKW--MAPESIFNCV-YTFESDVW  227 (302)
T ss_pred             HHHHHHHHHCCeehhhhccceEEEcCCCeEEECCCcccccccCCCceeecCCCCccccc--CCHhhhccCC-CCcHhHHH
Confidence            99999999988       6666       58999998652             123468  9999987765 89999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHH
Q psy7174         148 AVGCIICELLL-KAPFLPGESDLD  170 (188)
Q Consensus       148 slG~il~el~~-g~~pf~~~~~~~  170 (188)
                      |+||++|++++ |.+||.+.+...
T Consensus       228 slGvil~el~t~g~~p~~~~~~~~  251 (302)
T cd05055         228 SYGILLWEIFSLGSNPYPGMPVDS  251 (302)
T ss_pred             HHHHHHHHHHhCCCCCcCCCCchH
Confidence            99999999998 999987655443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) subfamily; catalytic (c) domain. The PDGFR subfamily consists of PDGFR alpha, PDGFR beta, KIT, CSF-1R, the mammalian FLT3, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. PDGFR kinase domains are autoinhibited by their juxtamembrane regions containing tyr residues. The binding to their ligands leads to recept

>cd08224 STKc_Nek6_Nek7 Catalytic domain of the Protein Serine/Threonine Kinases, Never In Mitosis gene A-related kinase 6 and 7

Probab=99.91  E-value=2.7e-23  Score=159.87  Aligned_cols=150  Identities=21%  Similarity=0.336  Sum_probs=115.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      +|.||+     +++..++|.++..   .....+.+.+|++++++++|+||+++++.+        ..+...++++||+++
T Consensus        15 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~ei~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~   86 (267)
T cd08224          15 FSVVYKAICLLDGRVVALKKVQIFEMMDAKARQDCLKEIDLLKQLDHPNVIKYLASF--------IENNELNIVLELADA   86 (267)
T ss_pred             ceEEEEEEEcCCCCEEEEEEeecccccchhhHHHHHHHHHHHHhCCCCCeeeeeeee--------ecCCeEEEEEecCCC
Confidence            566776     2223334444331   233466789999999999999999999975        445678999999999


Q ss_pred             ccHHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          77 TTKARFY------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        77 ~~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      +++..+.            ..+..++ .|++.||.|||+.+       |+|+       ++++|||++.           
T Consensus        87 ~~L~~~l~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~~i~h~dl~p~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~  165 (267)
T cd08224          87 GDLSRMIKHFKKQKRLIPERTIWKYF-VQLCSALEHMHSKRIMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS  165 (267)
T ss_pred             CCHHHHHHHhcccCCCcCHHHHHHHH-HHHHHHHHHHHhCCEecCCcChhhEEECCCCcEEEeccceeeeccCCCcccce
Confidence            9987642            3345566 79999999999988       5555       5999999743           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ..++..|  .|||.+.+.. ++.++|+||+|+++|++++|+.||...
T Consensus       166 ~~~~~~y--~apE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~  209 (267)
T cd08224         166 LVGTPYY--MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGD  209 (267)
T ss_pred             ecCCccc--cCHHHhccCC-CCchhcHHHHHHHHHHHHHCCCCcccC
Confidence            3456678  9999987655 899999999999999999999998543

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 6 (Nek6) and Nek7 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek6/7 subfamily is part of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek6 and Nek7 are the shortest Neks, consisting only of the catalytic domain and a very short N-terminal extension. They show distinct expression patterns and both appear to be downstream substrates of Nek9. They are required for mitotic spindle formation and cytokinesis. They may a

>cd05073 PTKc_Hck Catalytic domain of the Protein Tyrosine Kinase, Hematopoietic cell kinase

Probab=99.91  E-value=3.6e-23  Score=159.10  Aligned_cols=140  Identities=19%  Similarity=0.303  Sum_probs=110.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|++++++++|+||+++++.+        .+ ...++++||++++++..+.          ..+..++ .|++.
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~-~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~~  113 (260)
T cd05073          44 SVEAFLAEANVMKTLQHDKLVKLHAVV--------TK-EPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFS-AQIAE  113 (260)
T ss_pred             HHHHHHHHHHHHHhcCCCCcceEEEEE--------cC-CCeEEEEEeCCCCcHHHHHHhCCccccCHHHHHHHH-HHHHH
Confidence            346788999999999999999999974        22 5679999999999987752          2345566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ||.|||+.+       |+|+       +|++|||.....            ++..|  +|||.+.... ++.++|+||+|
T Consensus       114 aL~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Di~slG  190 (260)
T cd05073         114 GMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKW--TAPEAINFGS-FTIKSDVWSFG  190 (260)
T ss_pred             HHHHHHhCCccccccCcceEEEcCCCcEEECCCcceeeccCCCcccccCCcccccc--cCHhHhccCC-cCccccchHHH
Confidence            999999988       5565       699999975421            23458  8999987654 88999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHhhc
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |++|++++ |.+||.+.+..+....+.+..
T Consensus       191 ~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~  220 (260)
T cd05073         191 ILLMEIVTYGRIPYPGMSNPEVIRALERGY  220 (260)
T ss_pred             HHHHHHHhcCCCCCCCCCHHHHHHHHhCCC
Confidence            99999998 999998877665555554443

Protein Tyrosine Kinase (PTK) family; Hematopoietic cell kinase (Hck); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Hck is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) tyr kinases. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). Src proteins are involved in signaling pa

>cd06647 STKc_PAK_I Catalytic domain of the Protein Serine/Threonine Kinase, Group I p21-activated kinase

Probab=99.91  E-value=2.8e-23  Score=162.73  Aligned_cols=152  Identities=19%  Similarity=0.232  Sum_probs=116.7

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    +..++|.+........+.+.+|+.+++.++||||+++++.|        ..+...++++||+.++++
T Consensus        32 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~hp~i~~~~~~~--------~~~~~~~lv~e~~~~~~L  103 (293)
T cd06647          32 SGTVYTAIDVATGQEVAIKQMNLQQQPKKELIINEILVMRENKHPNIVNYLDSY--------LVGDELWVVMEYLAGGSL  103 (293)
T ss_pred             CeEEEEEEEcCCCCEEEEEEeccccchHHHHHHHHHHHHhhcCCCCeeehhhee--------eeCCcEEEEEecCCCCcH
Confidence            567776 21    22223333322334456788999999999999999999975        445678999999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+.       ..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..++..| 
T Consensus       104 ~~~~~~~~l~~~~~~~i~-~~l~~al~~LH~~gi~H~dL~p~Nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~y-  181 (293)
T cd06647         104 TDVVTETCMDEGQIAAVC-RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW-  181 (293)
T ss_pred             HHHHhhcCCCHHHHHHHH-HHHHHHHHHHHhCCEeeccCCHHHEEEcCCCCEEEccCcceecccccccccccccCChhh-
Confidence            8752       3456666 89999999999988       4444       6999999743           2456678 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                       ++||.+.... ++.++|+||+|+++|++++|++||.+.+.
T Consensus       182 -~~PE~~~~~~-~~~~~Dv~slG~ll~~ll~g~~pf~~~~~  220 (293)
T cd06647         182 -MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENP  220 (293)
T ss_pred             -cCchhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCh
Confidence             9999987754 89999999999999999999999976554

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group I, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAKs from higher eukaryotes are classified into two groups (I and II), according to their bi

>cd05098 PTKc_FGFR1 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 1

Probab=99.91  E-value=4.1e-23  Score=162.62  Aligned_cols=140  Identities=20%  Similarity=0.289  Sum_probs=110.0

Q ss_pred             hhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------------------
Q psy7174          27 VETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------------------   84 (188)
Q Consensus        27 ~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------------------   84 (188)
                      ..+++.+|+++++++ +||||+++++++        ..+...++++||+++++|..+..                     
T Consensus        66 ~~~~~~~e~~~l~~l~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~l  137 (307)
T cd05098          66 DLSDLISEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYCYNPTQVPEEQL  137 (307)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeeEEEEE--------ecCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCccccC
Confidence            345688899999999 799999999976        44567899999999999876532                     


Q ss_pred             ---HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccc
Q psy7174          85 ---HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELL  134 (188)
Q Consensus        85 ---~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~  134 (188)
                         .+..++ .|++.||+|||+++       |+|+       +|++|||++...             ++..|  +|||.+
T Consensus       138 ~~~~~~~~~-~qi~~aL~~lH~~gi~H~dlkp~Nill~~~~~~kL~dfg~a~~~~~~~~~~~~~~~~~~~~y--~aPE~~  214 (307)
T cd05098         138 SFKDLVSCA-YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW--MAPEAL  214 (307)
T ss_pred             CHHHHHHHH-HHHHHHHHHHHHCCcccccccHHheEEcCCCcEEECCCcccccccccchhhccccCCCccce--eChHHh
Confidence               234456 79999999999988       5555       599999986421             12468  999998


Q ss_pred             cccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         135 FGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       135 ~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .+.. ++.++|+||+||++|+|++ |..||.+.+..+....+...
T Consensus       215 ~~~~-~~~~~DvwslG~~l~el~~~g~~p~~~~~~~~~~~~~~~~  258 (307)
T cd05098         215 FDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEG  258 (307)
T ss_pred             ccCC-CCcHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHHcC
Confidence            7755 8999999999999999998 88999876665555544433

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 1 (FGFR1); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR1 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd08223 STKc_Nek4 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 4

Probab=99.91  E-value=5e-23  Score=157.61  Aligned_cols=141  Identities=23%  Similarity=0.244  Sum_probs=112.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQIL   95 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~   95 (188)
                      ...+.+.+|++++++++|+|++++++.+.       ..+...++++||++++++..+.          ..+..++ .|++
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~-------~~~~~~~lv~e~~~~~~l~~~l~~~~~~~l~~~~~~~~~-~~l~  112 (257)
T cd08223          41 RERKAAEQEAQLLSQLKHPNIVAYRESWE-------GEDGLLYIVMGFCEGGDLYHKLKEQKGKLLPENQVVEWF-VQIA  112 (257)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeeec-------CCCCEEEEEecccCCCcHHHHHHHhcCCCCCHHHHHHHH-HHHH
Confidence            34566889999999999999999988631       1244678999999999987652          3345666 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .|+.+||+.+       |+|+       ++++|||++.           ..++..|  +|||++.+.. ++.++|+||+|
T Consensus       113 ~~l~~lH~~~i~H~di~p~nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~slG  189 (257)
T cd08223         113 MALQYLHEKHILHRDLKTQNVFLTRTNIIKVGDLGIARVLENQCDMASTLIGTPYY--MSPELFSNKP-YNYKSDVWALG  189 (257)
T ss_pred             HHHHHHHhCCeeccCCCchhEEEecCCcEEEecccceEEecccCCccccccCCcCc--cChhHhcCCC-CCchhhhHHHH
Confidence            9999999988       6666       5899999754           2457789  9999987755 88999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++++++++|+.||.+.+.......+..
T Consensus       190 ~il~~l~~g~~~~~~~~~~~~~~~~~~  216 (257)
T cd08223         190 CCVYEMATLKHAFNAKDMNSLVYRIIE  216 (257)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHh
Confidence            999999999999987766555444433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 4 (Nek4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek4 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. Nek4 is highly abundant in the testis. Its specific function is unknown.

>cd05118 STKc_CMGC Catalytic domain of CMGC family Serine/Threonine Kinases

Probab=99.91  E-value=1.5e-23  Score=162.50  Aligned_cols=151  Identities=36%  Similarity=0.622  Sum_probs=121.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ....+.+|++++++++|+||+++++++        ..+...++++||+.+.....+        ...+..++ .|+++||
T Consensus        41 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~l~~~l~~~~~~~~~~~~~~~~-~~i~~~l  111 (283)
T cd05118          41 IPKTALREIKLLKELNHPNIIKLLDVF--------RHKGDLYLVFEFMDTDLYKLIKDRQRGLPESLIKSYL-YQLLQGL  111 (283)
T ss_pred             hHHHHHHHHHHHHHhcCCCcchHHHhh--------ccCCCEEEEEeccCCCHHHHHHhhcccCCHHHHHHHH-HHHHHHH
Confidence            446788999999999999999999975        445788999999986433322        23455666 8999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      .|||+.+       |+|+       +|++|||.+.           ..++..|  +|||.+.+...++.++|+||+|+++
T Consensus       112 ~~LH~~~i~H~dl~p~nili~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~--~~PE~~~~~~~~~~~~Di~slG~~l  189 (283)
T cd05118         112 AFCHSHGILHRDLKPENLLINTEGVLKLADFGLARSFGSPVRPYTHYVVTRWY--RAPELLLGDKGYSTPVDIWSVGCIF  189 (283)
T ss_pred             HHHHHCCeeecCcCHHHEEECCCCcEEEeeeeeeEecCCCcccccCccCcccc--cCcHHHhcCCCCCchhHHHHHHHHH
Confidence            9999998       4444       6999999753           2345668  9999987764589999999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |++++|++||.+.+..+.+..+.+.++.|.+..|+
T Consensus       190 ~~l~tg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (283)
T cd05118         190 AELLSRRPLFPGKSEIDQLFKIFRTLGTPDPEVWP  224 (283)
T ss_pred             HHHHhCCCCCCCCCHHHHHHHHHHHcCCCchHhcc
Confidence            99999999999998888888888888877776553

Serine/Threonine Kinases (STKs), CMGC family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CMGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The CMGC family consists of Cyclin-Dependent protein Kinases (CDKs), Mitogen-activated protein kinases (MAPKs) such as Extracellular signal-regulated kinase (ERKs), c-Jun N-terminal kinases (JNKs), and p38, and similar proteins. CDKs belong to a large subfamily of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. MAPKs serve as important mediators of cellular responses to extracellular signals. They

>cd07854 STKc_MAPK4_6 Catalytic domain of the Serine/Threonine Kinases, Mitogen-Activated Protein Kinases 4 and 6

Probab=99.91  E-value=1.9e-23  Score=167.04  Aligned_cols=171  Identities=29%  Similarity=0.404  Sum_probs=122.5

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccC------CCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQ------PTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~------~~~~~~~~~~iv~e~   73 (188)
                      ||.||. .    ++..++|.+........+.+.+|++++++++||||+++++++.....      ....+....++++||
T Consensus        18 ~g~vy~~~~~~~~~~v~iK~i~~~~~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~   97 (342)
T cd07854          18 NGLVFSAVDSDCDKRVAVKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVYEVLGPSGSDLTEDVGSLTELNSVYIVQEY   97 (342)
T ss_pred             CEEEEEEEECCCCcEEEEEEEecCCCchHHHHHHHHHHHHhcCCCcchhhHhhhcccccccccccccccccceEEEEeec
Confidence            677776 2    22233444433334455678899999999999999999987532110      001122357899999


Q ss_pred             cccccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCC--------eEEEecCCcccc-----------
Q psy7174          74 FTKTTKARF-------YSHLRYLENQQILEGLQALKSSM-------PAL--------LKKFVGIGIGRH-----------  120 (188)
Q Consensus        74 ~~~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~--------ilkl~dfg~~~~-----------  120 (188)
                      +.+ ++..+       +..+..++ .|+++||.|||+.+       |+|        .+|++|||++..           
T Consensus        98 ~~~-~L~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~givH~dikp~Nili~~~~~~~kl~dfg~~~~~~~~~~~~~~~  175 (342)
T cd07854          98 MET-DLANVLEQGPLSEEHARLFM-YQLLRGLKYIHSANVLHRDLKPANVFINTEDLVLKIGDFGLARIVDPHYSHKGYL  175 (342)
T ss_pred             ccc-cHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCHHHEEEcCCCceEEECCcccceecCCcccccccc
Confidence            974 66543       34566677 89999999999988       333        369999997642           


Q ss_pred             ---cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         121 ---VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       121 ---~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                         .++..|  +|||.+.....++.++|+||+||++|++++|+.||.+.++......+....
T Consensus       176 ~~~~~~~~y--~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~~~~~~~~~  235 (342)
T cd07854         176 SEGLVTKWY--RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKPLFAGAHELEQMQLILESV  235 (342)
T ss_pred             ccccccccc--cCHHHHhCccccCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhc
Confidence               346678  999987654458899999999999999999999999888777766665543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 4 (MAPK4) and MAPK6 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK4/6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. MAPK4 is also called ERK4 or p63MAPK, while MAPK6 is also called ERK3 or p97MAPK. MAPK4 and MAPK6 are atypical MAPKs that are not regulated by MAP2Ks. MAPK6 is expressed ubiquitously with highest amounts in brain and skeletal muscle. It may be involved in the control of cell differentiation by negatively regulating cell cycle progressi

>cd06656 STKc_PAK3 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 3

Probab=99.91  E-value=1.1e-23  Score=165.24  Aligned_cols=152  Identities=19%  Similarity=0.232  Sum_probs=117.9

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|.||+ .    ++..++|.+........+.+.+|+.+++.++||||++++++|        ..+...++++||++++++
T Consensus        32 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L  103 (297)
T cd06656          32 SGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY--------LVGDELWVVMEYLAGGSL  103 (297)
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCccchHHHHHHHHHHHHhCCCCCEeeEEEEE--------ecCCEEEEeecccCCCCH
Confidence            566776 2    223334444333334456788999999999999999999976        446678999999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+.       ..+..++ .|++.||.|||+.+       |+|+       +|++|||++.           ..++..| 
T Consensus       104 ~~~~~~~~~~~~~~~~~~-~~l~~~L~~LH~~~i~H~dL~p~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~y-  181 (297)
T cd06656         104 TDVVTETCMDEGQIAAVC-RECLQALDFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW-  181 (297)
T ss_pred             HHHHHhCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEECcCccceEccCCccCcCcccCCccc-
Confidence            8763       3455666 79999999999988       4554       6999999753           2456788 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                       +|||.+.+.. ++.++|+||+||++|++++|.+||.+.++
T Consensus       182 -~aPE~~~~~~-~~~~~Di~slGvil~~l~tg~~pf~~~~~  220 (297)
T cd06656         182 -MAPEVVTRKA-YGPKVDIWSLGIMAIEMVEGEPPYLNENP  220 (297)
T ss_pred             -cCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCc
Confidence             9999997755 88999999999999999999999976543

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding

>cd07877 STKc_p38alpha_MAPK14 Catalytic domain of the Serine/Threonine Kinase, p38alpha Mitogen-Activated Protein Kinase

Probab=99.91  E-value=1.8e-23  Score=167.51  Aligned_cols=151  Identities=28%  Similarity=0.508  Sum_probs=114.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~   99 (188)
                      ..+.+.+|++++++++||||+++++++....  ........+++++++ ++++..+       +..+..++ .|++.||.
T Consensus        59 ~~~~~~~Ei~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~lv~~~~-~~~L~~~~~~~~l~~~~~~~i~-~qi~~aL~  134 (345)
T cd07877          59 HAKRTYRELRLLKHMKHENVIGLLDVFTPAR--SLEEFNDVYLVTHLM-GADLNNIVKCQKLTDDHVQFLI-YQILRGLK  134 (345)
T ss_pred             HHHHHHHHHHHHHHcCCCcccceeeeeeecc--cccccccEEEEehhc-ccCHHHHHhcCCCCHHHHHHHH-HHHHHHHH
Confidence            3466788999999999999999999763211  111223456777765 6677654       34556666 79999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL  157 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~  157 (188)
                      |||+.+       |+|+       +|++|||++.        ..++..|  +|||.+.+...++.++|+||+||++|+++
T Consensus       135 ~LH~~~ivH~dlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~DvwslG~il~el~  212 (345)
T cd07877         135 YIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY--RAPEIMLNWMHYNQTVDIWSVGCIMAELL  212 (345)
T ss_pred             HHHHCCeeecCCChHHEEEcCCCCEEEecccccccccccccccccCCCc--cCHHHHhCccCCCchhhHHHHHHHHHHHH
Confidence            999998       5555       6999999854        3467789  99999876444889999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         158 LKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       158 ~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      +|++||.+.+....+..+.+..+.++
T Consensus       213 ~g~~pf~~~~~~~~~~~~~~~~~~~~  238 (345)
T cd07877         213 TGRTLFPGTDHIDQLKLILRLVGTPG  238 (345)
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            99999988877777777666555443

Serine/Threonine Kinases (STKs), p38alpha subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38alpha subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38alpha, also called MAPK14

>cd05109 PTKc_HER2 Catalytic domain of the Protein Tyrosine Kinase, HER2

Probab=99.91  E-value=6.7e-23  Score=159.11  Aligned_cols=140  Identities=16%  Similarity=0.189  Sum_probs=109.7

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQI   94 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi   94 (188)
                      .....+.+.+|+.+++.++||||+++++++.         ....++++|++++|++..+.         ..+..++ .|+
T Consensus        49 ~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~~---------~~~~~l~~~~~~~g~l~~~l~~~~~~~~~~~~~~~~-~qi  118 (279)
T cd05109          49 SPKANKEILDEAYVMAGVGSPYVCRLLGICL---------TSTVQLVTQLMPYGCLLDYVRENKDRIGSQDLLNWC-VQI  118 (279)
T ss_pred             CHHHHHHHHHHHHHHHhcCCCCCceEEEEEc---------CCCcEEEEEcCCCCCHHHHHhhccCCCCHHHHHHHH-HHH
Confidence            3445567889999999999999999999752         23578999999999988753         2344455 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      +.||.|||+.+       |+|+       +||+|||+++..             ++..|  +|||.+.+.. ++.++|||
T Consensus       119 ~~~L~~lH~~~iiH~dlkp~Nil~~~~~~~kL~dfG~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Di~  195 (279)
T cd05109         119 AKGMSYLEEVRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKW--MALESILHRR-FTHQSDVW  195 (279)
T ss_pred             HHHHHHHHHCCeeccccccceEEEcCCCcEEECCCCceeecccccceeecCCCccchhh--CCHHHhccCC-CCchhHHH
Confidence            99999999998       6666       599999986522             23468  9999997755 89999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         148 AVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       148 slG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      ||||++||+++ |.+||.+.........+.
T Consensus       196 slG~~l~el~t~g~~p~~~~~~~~~~~~~~  225 (279)
T cd05109         196 SYGVTVWELMTFGAKPYDGIPAREIPDLLE  225 (279)
T ss_pred             HHHHHHHHHHcCCCCCCCCCCHHHHHHHHH
Confidence            99999999998 899997766554444333

Protein Tyrosine Kinase (PTK) family; HER2 (ErbB2, HER2/neu); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER2 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve

>cd05572 STKc_cGK_PKG Catalytic domain of the Protein Serine/Threonine Kinase, cGMP-dependent protein kinase

Probab=99.91  E-value=3.8e-23  Score=158.93  Aligned_cols=160  Identities=14%  Similarity=0.195  Sum_probs=122.2

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      +|.||. .    ++..++|.+.+.   .....+.+.+|+++++.++||||+++++.+        .++...++++||+.+
T Consensus         6 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~   77 (262)
T cd05572           6 FGRVELVKVKSKNRTFALKCVKKRHIVETGQQEHIFSEKEILEECNHPFIVKLYRTF--------KDKKYIYMLMEYCLG   77 (262)
T ss_pred             ceEEEEEEECCCCcEEEEEEEehhcchhhhHHHHHHHHHHHHHhCCCCCEeeeeeeE--------EcCCccEEEEecCCC
Confidence            567776 1    333345544432   223456789999999999999999999975        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      ++|..+        ...+..++ .|+++||.|||+.+       |+|+       +|++|||+..          ..++.
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~-~~i~~~l~~lH~~~~~h~dl~~~nilv~~~~~~~l~df~~~~~~~~~~~~~~~~~~~  156 (262)
T cd05572          78 GELWTILRDRGLFDEYTARFYI-ACVVLAFEYLHNRGIIYRDLKPENLLLDSNGYVKLVDFGFAKKLKSGQKTWTFCGTP  156 (262)
T ss_pred             CcHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhCCcccCCCCHHHEEEcCCCCEEEeeCCcccccCcccccccccCCc
Confidence            999875        23455566 79999999999988       4444       6999999854          23566


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--hHHHHHHHH
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES--DLDQLTRIF  176 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--~~~~~~~i~  176 (188)
                      .|  ++||.+.... ++.++|+||+|+++|++++|..||....  ..+....+.
T Consensus       157 ~~--~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~  207 (262)
T cd05572         157 EY--VAPEIILNKG-YDFSVDYWSLGILLYELLTGRPPFGEDDEDPMEIYNDIL  207 (262)
T ss_pred             Cc--cChhHhcCCC-CCChhhhhhhHHHHHHHHhCCCCcCCCCCCHHHHHHHHh
Confidence            78  9999987654 8999999999999999999999998766  444444444

Serine/Threonine Kinases (STKs), cGMP-dependent protein kinase (cGK or PKG) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cGK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Mammals have two cGK isoforms from different genes, cGKI and cGKII. cGKI exists as two splice variants, cGKI-alpha and cGKI-beta. cGK consists of an N-terminal regulatory domain containing a dimerization and an autoinhibitory pseudosubstrate region, two cGMP-binding domains, and a C-terminal catalytic domain. Binding of cGMP to both binding sites releases the inhibition of the catalytic center by the pseudosubstrate region, allowi

>cd05053 PTKc_FGFR Catalytic domain of the Protein Tyrosine Kinases, Fibroblast Growth Factor Receptors

Probab=99.91  E-value=3.7e-23  Score=161.49  Aligned_cols=139  Identities=21%  Similarity=0.302  Sum_probs=109.8

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ....++.+|+++++++ +||||+++++++        ..+...++++||++++++..+..                    
T Consensus        57 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~--------~~~~~~~li~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  128 (293)
T cd05053          57 KDLSDLVSEMEMMKMIGKHKNIINLLGVC--------TQEGPLYVVVEYAAHGNLRDFLRARRPPGEYASPDDPRPPEET  128 (293)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEE--------cCCCCeEEEEEeCCCCcHHHHHHhcCCCccccccccccccccc
Confidence            3445688999999999 799999999975        34567899999999999877542                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCcc
Q psy7174          85 ----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPEL  133 (188)
Q Consensus        85 ----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~  133 (188)
                          .+..++ .|++.||.|||+.+       |+|+       +|++|||+++..             ++..|  +|||.
T Consensus       129 l~~~~~~~i~-~qi~~al~~LH~~~ivH~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~  205 (293)
T cd05053         129 LTQKDLVSFA-YQVARGMEFLASKKCIHRDLAARNVLVTEDHVMKIADFGLARDIHHIDYYRKTTNGRLPVKW--MAPEA  205 (293)
T ss_pred             cCHHHHHHHH-HHHHHHHHHHHHCCccccccceeeEEEcCCCeEEeCccccccccccccceeccCCCCCCccc--cCHHH
Confidence                234456 79999999999987       6665       599999986421             23458  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      +.+.. ++.++||||+||++|++++ |..||.+.+..+....+.
T Consensus       206 ~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~  248 (293)
T cd05053         206 LFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLK  248 (293)
T ss_pred             hccCC-cCcccceeehhhHHHHHhcCCCCCCCCCCHHHHHHHHH
Confidence            87755 8999999999999999997 999998766555444443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor (FGFR) subfamily; catalytic (c) domain. The FGFR subfamily consists of FGFR1, FGFR2, FGFR3, FGFR4, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K).PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, and to heparin/heparan sulfate (HS) results in the formation of a ternary complex, which leads to receptor dimerization and activation,

>cd06917 STKc_NAK1_like Catalytic domain of Fungal Nak1-like Protein Serine/Threonine Kinases

Probab=99.91  E-value=6.6e-23  Score=158.81  Aligned_cols=153  Identities=16%  Similarity=0.217  Sum_probs=116.4

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCC---CCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLD---YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~---h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.+|+ .    ++..++|.++.. .....+++.+|++++++++   |||++++++++        ..+...++++||+.
T Consensus        14 ~g~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~l~~l~~~~~~~vi~~~~~~--------~~~~~~~lv~e~~~   85 (277)
T cd06917          14 YGAVYRGKHVPTGRVVALKIINLDTPDDDVSDIQREVALLSQLRQSQPPNITKYYGSY--------LKGPRLWIIMEYAE   85 (277)
T ss_pred             CceEEEEEEcCCCcEEEEEEecCCCCchhHHHHHHHHHHHHHhccCCCCCeeeEeeee--------eeCCEEEEEEecCC
Confidence            567776 1    222334433332 3344567889999999997   99999999975        44567899999999


Q ss_pred             cccHHHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          76 KTTKARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        76 ~~~l~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++|..+.       ..+..++ .|+++||.|||+.+       |.|+       ++++|||++.           ..|+
T Consensus        86 ~~~L~~~~~~~~l~~~~~~~i~-~~i~~~l~~lh~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  164 (277)
T cd06917          86 GGSVRTLMKAGPIAEKYISVII-REVLVALKYIHKVGVIHRDIKAANILVTNTGNVKLCDFGVAALLNQNSSKRSTFVGT  164 (277)
T ss_pred             CCcHHHHHHccCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCcCHHHEEEcCCCCEEEccCCceeecCCCccccccccCC
Confidence            99988752       3455566 79999999999988       4444       6999999754           2456


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      ..|  +|||.+.+...++.++|+||+|+++|+|++|.+||.+.+.
T Consensus       165 ~~y--~aPE~~~~~~~~~~~~Dv~slG~~l~~ll~g~~p~~~~~~  207 (277)
T cd06917         165 PYW--MAPEVITEGKYYDTKADIWSLGITIYEMATGNPPYSDVDA  207 (277)
T ss_pred             cce--eCHHHhccCCccccchhHHHHHHHHHHHHhCCCCCCCCCh
Confidence            678  9999987654478999999999999999999999976544

Serine/threonine kinases (STKs), Nak1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nak1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of Schizosaccharomyces pombe Nak1, Saccharomyces cerevisiae Kic1p (kinase that interacts with Cdc31p) and related proteins. Nak1 (also known as N-rich kinase 1), is required by fission yeast for polarizing the tips of actin cytoskeleton and is involved in cell growth, cell separation, cell morphology and cell-cycle progression. Kic1p is required by budding yeast for cell integrity and morphogenesis. Kic1p interacts with Cdc31p, the yeast homologue of cent

>cd06641 STKc_MST3 Catalytic domain of the Protein Serine/Threonine Kinase, Mammalian Ste20-like protein kinase 3

Probab=99.91  E-value=5.2e-23  Score=159.65  Aligned_cols=158  Identities=18%  Similarity=0.221  Sum_probs=120.3

Q ss_pred             cccccc-cCCcc-ccccccc---c-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QSKWS-PNTPMAR---C-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~---~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ ..+.. ..+++|.   . .....+.+.+|++++++++||||+++++.+        ..+...++++||+.+++
T Consensus        17 ~~~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~   88 (277)
T cd06641          17 FGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY--------LKDTKLWIIMEYLGGGS   88 (277)
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHHHhcCCCCEeEEEEEE--------EeCCeEEEEEEeCCCCc
Confidence            677887 22222 2333433   2 233456788999999999999999999975        44667899999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          79 KARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        79 l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      +..+       ...+..++ .|++.|+.+||+.+       |.|+       ++++|||++.           ..++..|
T Consensus        89 l~~~i~~~~~~~~~~~~~~-~~l~~~l~~lh~~~i~h~dl~p~Ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y  167 (277)
T cd06641          89 ALDLLEPGPLDETQIATIL-REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW  167 (277)
T ss_pred             HHHHHhcCCCCHHHHHHHH-HHHHHHHHHHccCCeecCCCCHHhEEECCCCCEEEeecccceecccchhhhccccCCccc
Confidence            8875       33456666 89999999999988       4454       6999999753           2456788


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                        +|||.+.+.. ++.++|+||+||++|++++|.+||...+.......
T Consensus       168 --~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~~~~~~~~~  212 (277)
T cd06641         168 --MAPEVIKQSA-YDSKADIWSLGITAIELAKGEPPHSELHPMKVLFL  212 (277)
T ss_pred             --cChhhhccCC-CCchhhHHHHHHHHHHHHcCCCCCCccchHHHHHH
Confidence              9999987654 78999999999999999999999976655443333

Serine/threonine kinases (STKs), mammalian Ste20-like protein kinase 3 (MST3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MST3 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MST3 phosphorylates the STK NDR and may play a role in cell cycle progression and cell morphology. It may also regulate paxillin and consequently, cell migration. MST3 is present in human placenta, where it plays an essential role in the oxidative stress-induced apoptosis of trophoblasts in normal spontaneous delivery. Dysregulation of trophoblast apoptosis may result in pregnancy complications such as preeclampsia and int

>cd06622 PKc_MAPKK_PBS2_like Catalytic domain of fungal PBS2-like dual-specificity MAP kinase kinases

Probab=99.91  E-value=2.2e-23  Score=162.23  Aligned_cols=157  Identities=18%  Similarity=0.223  Sum_probs=115.9

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.++.. .......+.+|++++++++||||+++++.+        ..+...++++||+++++
T Consensus        14 ~g~v~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   85 (286)
T cd06622          14 YGSVYKVLHRPTGVTMAMKEIRLELDESKFNQIIMELDILHKAVSPYIVDFYGAF--------FIEGAVYMCMEYMDAGS   85 (286)
T ss_pred             CeEEEEEEEcCCCcEEEEEEeecccCHHHHHHHHHHHHHHHhcCCCcHHhhhhhe--------ecCCeEEEEEeecCCCC
Confidence            567776 2    222223333322 233456788999999999999999999965        44678899999999999


Q ss_pred             HHHHH-----------HHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCcccc---------ccc
Q psy7174          79 KARFY-----------SHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGRH---------VCT  123 (188)
Q Consensus        79 l~~~~-----------~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~~---------~~~  123 (188)
                      +..+.           ..+..++ .|++.||.|||+. +       |+|+       +|++|||++..         .++
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  164 (286)
T cd06622          86 LDKLYAGGVATEGIPEDVLRRIT-YAVVKGLKFLKEEHNIIHRDVKPTNVLVNGNGQVKLCDFGVSGNLVASLAKTNIGC  164 (286)
T ss_pred             HHHHHHhccccCCCCHHHHHHHH-HHHHHHHHHHHhcCCEeeCCCCHHHEEECCCCCEEEeecCCcccccCCccccCCCc
Confidence            87652           2456666 7999999999974 4       4444       69999997642         356


Q ss_pred             ccccCCCCccccccC-----CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy7174         124 LYCTRGAPELLFGAR-----MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL  172 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~-----~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  172 (188)
                      ..|  +|||.+.+..     .++.++|+||+||++|++++|..||...+.....
T Consensus       165 ~~y--~aPE~~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~  216 (286)
T cd06622         165 QSY--MAPERIKSGGPNQNPTYTVQSDVWSLGLSILEMALGRYPYPPETYANIF  216 (286)
T ss_pred             cCc--cCcchhcCCCCCccCCCCcccchHhHHHHHHHHHhCCCCCCCcchhhHH
Confidence            678  9999985432     2578999999999999999999999765544433

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal PBS2-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05578 STKc_Yank1 Catalytic domain of the Protein Serine/Threonine Kinase, Yank1

Probab=99.91  E-value=1.1e-23  Score=161.54  Aligned_cols=131  Identities=19%  Similarity=0.223  Sum_probs=109.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|++++++++||||+++++++        .++...++++||+.++++...        +..+..++ .|+++|
T Consensus        42 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~i~~~  112 (258)
T cd05578          42 GSVRNVLNERRILQELNHPFLVNLWYSF--------QDEENMYLVVDLLLGGDLRYHLSQKVKFSEEQVKFWI-CEIVLA  112 (258)
T ss_pred             hHHHHHHHHHHHHHhCCCCChHHHHHhh--------cCCCeEEEEEeCCCCCCHHHHHHhcCCcCHHHHHHHH-HHHHHH
Confidence            4457789999999999999999999865        456789999999999998875        23456666 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      |.|||+++       |+|+       ++++|||+..          ..++..|  +|||.+.+.. ++.++|+||+|+++
T Consensus       113 l~~lh~~~i~h~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Di~slG~~l  189 (258)
T cd05578         113 LEYLHSKGIIHRDIKPDNILLDEQGHVHITDFNIATKVTPDTLTTSTSGTPGY--MAPEVLCRQG-YSVAVDWWSLGVTA  189 (258)
T ss_pred             HHHHHhCCeeccCCCHHHeEEcCCCCEEEeecccccccCCCccccccCCChhh--cCHHHHcccC-CCCcccchhhHHHH
Confidence            99999988       4444       6999999754          3356678  9999997755 89999999999999


Q ss_pred             HHHHhCCCCCCCCCh
Q psy7174         154 CELLLKAPFLPGESD  168 (188)
Q Consensus       154 ~el~~g~~pf~~~~~  168 (188)
                      |++++|..||...+.
T Consensus       190 ~~l~~g~~p~~~~~~  204 (258)
T cd05578         190 YECLRGKRPYRGHSR  204 (258)
T ss_pred             HHHHhCCCCCCCCCc
Confidence            999999999987663

Serine/Threonine Kinases (STKs), Yank1 or STK32A subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Yank1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily contains uncharacterized STKs with similarity to the human protein designated Yank1 or STK32A.

>cd05100 PTKc_FGFR3 Catalytic domain of the Protein Tyrosine Kinase, Fibroblast Growth Factor Receptor 3

Probab=99.91  E-value=6.3e-23  Score=163.46  Aligned_cols=141  Identities=21%  Similarity=0.287  Sum_probs=112.1

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ...+++.+|+++++++ +||||++++++|        ..+...++++||+++++|..+..                    
T Consensus        59 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~  130 (334)
T cd05100          59 KDLSDLVSEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVLVEYASKGNLREYLRARRPPGMDYSFDTCKLPEEQ  130 (334)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeeeEEE--------ccCCceEEEEecCCCCcHHHHHHhcCCcccccccccccCcccc
Confidence            3456788999999999 799999999976        34567899999999999887532                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCcc
Q psy7174          85 ----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPEL  133 (188)
Q Consensus        85 ----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~  133 (188)
                          .+..++ .|+++||.|||+++       |+|+       +||+|||+++..             ++..|  +|||+
T Consensus       131 l~~~~~~~~~-~qi~~al~~LH~~givH~dlkp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~  207 (334)
T cd05100         131 LTFKDLVSCA-YQVARGMEYLASQKCIHRDLAARNVLVTEDNVMKIADFGLARDVHNIDYYKKTTNGRLPVKW--MAPEA  207 (334)
T ss_pred             CCHHHHHHHH-HHHHHHHHHHHHCCeeccccccceEEEcCCCcEEECCcccceecccccccccccCCCcCceE--cCHHH
Confidence                223355 79999999999988       6666       599999986521             12458  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +.+.. ++.++|+||+||++|||++ |..||.+.+..+....+...
T Consensus       208 ~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~  252 (334)
T cd05100         208 LFDRV-YTHQSDVWSFGVLLWEIFTLGGSPYPGIPVEELFKLLKEG  252 (334)
T ss_pred             hccCC-cCchhhhHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            97755 8999999999999999998 88999887766666555443

Protein Tyrosine Kinase (PTK) family; Fibroblast Growth Factor Receptor 3 (FGFR3); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. FGFR3 is part of the FGFR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with three immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of FGFRs to their ligands, the FGFs, results in receptor dimerization and activation, and intracellular signaling. The binding of FGFs to FGFRs is promiscuous, in that a receptor may be activated by several ligands and a ligand may bind to

>cd07852 STKc_MAPK15 Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase 15

Probab=99.91  E-value=1.8e-23  Score=166.72  Aligned_cols=147  Identities=33%  Similarity=0.578  Sum_probs=114.4

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|+.+++++ +||||++++++|.      ..++...++++||+.+ ++..+       ......++ .|++.|
T Consensus        48 ~~~~~~~~E~~~l~~l~~h~ni~~~~~~~~------~~~~~~~~lv~e~~~~-~L~~~~~~~~~~~~~~~~i~-~qi~~~  119 (337)
T cd07852          48 TDAQRTFREIMFLQELGDHPNIVKLLNVIK------AENDKDIYLVFEYMET-DLHAVIRANILEDVHKRYIM-YQLLKA  119 (337)
T ss_pred             hhhhhhhHHHHHHHHhcCCCCccceeeeec------cCCCceEEEEeccccc-CHHHHHhcCCCCHHHHHHHH-HHHHHH
Confidence            3445677899999999 9999999999751      1334567999999975 55553       22344566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc----------------ccccccccCCCCccccccCCCCchhHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR----------------HVCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~----------------~~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      |.|||+++       |+|+       +|++|||++.                ..++..|  +|||.+.+...++.++|+|
T Consensus       120 L~~LH~~~i~H~dl~p~nill~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~sDi~  197 (337)
T cd07852         120 LKYIHSGNVIHRDLKPSNILLNSDCRVKLADFGLARSLSELEENPENPVLTDYVATRWY--RAPEILLGSTRYTKGVDMW  197 (337)
T ss_pred             HHHHHHCCeecCCCCHHHEEEcCCCcEEEeeccchhccccccccccCcchhcccccccc--cCceeeeccccccccchHH
Confidence            99999988       4454       6999999754                2356679  9999886655578999999


Q ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         148 AVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       148 slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      |+|+++|++++|++||.+........++....+.+
T Consensus       198 slG~~l~el~tg~~pf~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07852         198 SVGCILGEMLLGKPLFPGTSTLNQLEKIIEVIGPP  232 (337)
T ss_pred             HHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            99999999999999999888777777776655544

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase 15 (MAPK15) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK15 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. Human MAPK15 is also called Extracellular signal Regulated Kinase 8 (ERK8) while the rat protein is called ERK7. ERK7 and ERK8 display both similar and different biochemical properties. They autophosphorylate and activate themselves and do not require upstream activating kinases. ERK7 is constitutively active and is not affected by extracellular stimul

>KOG2345|consensus

Probab=99.91  E-value=1.8e-23  Score=155.28  Aligned_cols=166  Identities=16%  Similarity=0.324  Sum_probs=127.5

Q ss_pred             cccccc--c-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----------
Q psy7174          17 NTPMAR--C-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----------   82 (188)
Q Consensus        17 ~~~i~~--~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----------   82 (188)
                      ..|+|+  | ..+..+.+++|++..++++|||++++++...-...+   .....|+++.|...|++.+.           
T Consensus        48 ~YAlKkI~c~~~~~~e~~~rEid~~rkf~s~~vl~l~dh~l~~~~D---~~~~~yll~Pyy~~Gsl~d~i~~~k~kg~~~  124 (302)
T KOG2345|consen   48 LYALKKILCHSQEDIEEALREIDNHRKFNSPNVLRLVDHQLREEKD---GKHEAYLLLPYYKRGSLLDEIERLKIKGNFV  124 (302)
T ss_pred             chhhheeeccchHHHHHHHHHHHHHHhhCCcchHHHHHHHHHhhcc---CceeEEEEeehhccccHHHHHHHHhhcCCcc
Confidence            456666  3 457788899999999999999999999865332211   23457999999999998774           


Q ss_pred             -HHHHHHHHHHHHHHHHHHHhhcC---------CCCeE-------EEecCCccc--------------------cccccc
Q psy7174          83 -YSHLRYLENQQILEGLQALKSSM---------PALLK-------KFVGIGIGR--------------------HVCTLY  125 (188)
Q Consensus        83 -~~~~~~~~~~qi~~gl~~lH~~~---------~~~il-------kl~dfg~~~--------------------~~~~~~  125 (188)
                       +.++.+++ .++++||++||...         |.||+       ++.|||..+                    ..+|..
T Consensus       125 sE~~iL~if-~gic~gL~~lH~~~~~yAH~DiKP~NILls~~~~~vl~D~GS~~~a~i~i~~~~~a~~lQe~a~e~Ct~p  203 (302)
T KOG2345|consen  125 SEAQILWIF-LGICRGLEALHEKEPPYAHRDIKPANILLSDSGLPVLMDLGSATQAPIQIEGSRQALRLQEWAEERCTIP  203 (302)
T ss_pred             CHHHHHHHH-HHHHHHHHHHhccCCcccccCCCcceeEecCCCceEEEeccCccccceEeechHHHHHHHHHHHHhCCCc
Confidence             45567777 79999999999987         77775       899999633                    346788


Q ss_pred             ccCCCCccccccC--CCCchhHHHHHHHHHHHHHhCCCCCCC-----C-----------------ChHHHHHHHHhhcCC
Q psy7174         126 CTRGAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPG-----E-----------------SDLDQLTRIFQTLGT  181 (188)
Q Consensus       126 y~~~aPe~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~-----~-----------------~~~~~~~~i~~~~~~  181 (188)
                      |  +|||++....  ..+.++|||||||++|+|+.|..||..     .                 .-.+.+.++++....
T Consensus       204 y--RAPELf~vk~~~ti~ertDIWSLGCtLYa~mf~~sPfe~~~~~GgSlaLAv~n~q~s~P~~~~yse~l~~lik~mlq  281 (302)
T KOG2345|consen  204 Y--RAPELFNVKSHCTITERTDIWSLGCTLYAMMFGESPFERIYQQGGSLALAVQNAQISIPNSSRYSEALHQLIKSMLQ  281 (302)
T ss_pred             c--cCchheecccCcccccccchhhhhHHHHHHHHcCCcchHHhhcCCeEEEeeeccccccCCCCCccHHHHHHHHHHhc
Confidence            9  9999986432  357899999999999999999999931     1                 124456666777777


Q ss_pred             CCCCCCC
Q psy7174         182 PSEDTWP  188 (188)
Q Consensus       182 p~~~~~p  188 (188)
                      ++|.+.|
T Consensus       282 vdP~qRP  288 (302)
T KOG2345|consen  282 VDPNQRP  288 (302)
T ss_pred             CCcccCC
Confidence            7887776

>KOG1006|consensus

Probab=99.91  E-value=4.1e-25  Score=165.69  Aligned_cols=159  Identities=16%  Similarity=0.170  Sum_probs=118.5

Q ss_pred             cccccc-cCCccc-ccccccc----chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC----DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~----~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.|.+ .++.+. +.|+|+.    ..++.++++.|.+...+- +.||||+|+|++        +.+...|+.||.+. -
T Consensus        77 fG~V~KM~hk~sg~~mAVKrIr~~n~~keq~rll~e~d~~mks~~cp~IVkfyGa~--------F~EGdcWiCMELMd-~  147 (361)
T KOG1006|consen   77 FGTVNKMLHKPSGKLMAVKRIRSNNIEKEQKRLLMEHDTVMKSSNCPNIVKFYGAL--------FSEGDCWICMELMD-I  147 (361)
T ss_pred             chhhhhhhcCccCcEEEEEEeeeccchHHHHHHHHHHHHHHhhcCCcHHHHHhhhh--------hcCCceeeeHHHHh-h
Confidence            788888 666555 7777773    346677899999876655 589999999975        66788999999884 4


Q ss_pred             cHHHH-------------HHHHHHHHHHHHHHHHHHHhhcC--------CCCe-------EEEecCCcc----------c
Q psy7174          78 TKARF-------------YSHLRYLENQQILEGLQALKSSM--------PALL-------KKFVGIGIG----------R  119 (188)
Q Consensus        78 ~l~~~-------------~~~~~~~~~~qi~~gl~~lH~~~--------~~~i-------lkl~dfg~~----------~  119 (188)
                      +++.+             ++-+..+. --.+.||+||-..-        |+||       +|+||||..          .
T Consensus       148 SlDklYk~vy~vq~~~ipE~Ilg~It-vatV~AL~yLK~~lkiIHRDvKPSNILldr~G~vKLCDFGIcGqLv~SiAkT~  226 (361)
T KOG1006|consen  148 SLDKLYKRVYSVQKSRIPENILGHIT-VATVDALDYLKEELKIIHRDVKPSNILLDRHGDVKLCDFGICGQLVDSIAKTV  226 (361)
T ss_pred             hHHHHHHHHHHHHhccCcHhhhhhee-eeehhHHHHHHHHhhhhhccCChhheEEecCCCEeeecccchHhHHHHHHhhh
Confidence            44443             11222222 24567888885543        8888       499999973          3


Q ss_pred             ccccccccCCCCccccccC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         120 HVCTLYCTRGAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ..|+..|  +|||.+.... .|+.+||+||||++++|+++|+.|+.+++.  +++++.+
T Consensus       227 daGCrpY--mAPERi~p~~~gyDiRSDvWSLGITL~EvAtG~fPyr~w~s--vfeql~~  281 (361)
T KOG1006|consen  227 DAGCRPY--MAPERIDPSDKGYDIRSDVWSLGITLYEVATGNFPYRKWDS--VFEQLCQ  281 (361)
T ss_pred             ccCCccc--cChhccCCccCCcchhhhhhhhcceEeeeecCCCCcchHHH--HHHHHHH
Confidence            6789999  9999996543 499999999999999999999999998876  4444444

>cd05107 PTKc_PDGFR_beta Catalytic domain of the Protein Tyrosine Kinase, Platelet Derived Growth Factor Receptor beta

Probab=99.91  E-value=7.7e-23  Score=166.94  Aligned_cols=156  Identities=18%  Similarity=0.206  Sum_probs=116.7

Q ss_pred             cccccc-cC---------Ccccccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-QS---------KWSPNTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~~---------~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+ ..         +..++|.++.. .....+.+.+|+++|.++. ||||++++++|        ..+...++++|
T Consensus        50 fG~Vy~~~~~~~~~~~~~~~vavK~l~~~~~~~~~~~~~~E~~~l~~l~~H~niv~~~~~~--------~~~~~~~iv~E  121 (401)
T cd05107          50 FGRVVEATAHGLSHSQSTMKVAVKMLKSTARSSEKQALMSELKIMSHLGPHLNIVNLLGAC--------TKGGPIYIITE  121 (401)
T ss_pred             ceeEEEEEEcCCCCCCCceEEEEEecCCCCChhHHHHHHHHHHHHHhcCCCCCeEEEEEEE--------ccCCCcEEEEe
Confidence            677876 21         12334444432 2233457889999999998 99999999986        34567899999


Q ss_pred             ccccccHHHHHHH-------------------------------------------------------------------
Q psy7174          73 IFTKTTKARFYSH-------------------------------------------------------------------   85 (188)
Q Consensus        73 ~~~~~~l~~~~~~-------------------------------------------------------------------   85 (188)
                      |+.+|+|..+...                                                                   
T Consensus       122 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  201 (401)
T cd05107         122 YCRYGDLVDYLHRNKHTFLQYYLDKNRDDGSLISGGSTPLSQRKSHVSLGSESDGGYMDMSKDESADYVPMQDMKGTVKY  201 (401)
T ss_pred             ccCCCcHHHHHHhccccchhhhcccccccccccccccccccccccchhhhhccCccccccCCccccCccchhcchhhhhh
Confidence            9999998775321                                                                   


Q ss_pred             ---------------------------------------HHHHHHHHHHHHHHHHhhcC-------CCCe-------EEE
Q psy7174          86 ---------------------------------------LRYLENQQILEGLQALKSSM-------PALL-------KKF  112 (188)
Q Consensus        86 ---------------------------------------~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl  112 (188)
                                                             +..++ .|++.||+|||+.+       |.|+       +|+
T Consensus       202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivHrdlkp~NiLl~~~~~~kL  280 (401)
T cd05107         202 ADIESSNYESPYDQYLPSAPERTRRDTLINESPALSYMDLVGFS-YQVANGMEFLASKNCVHRDLAARNVLICEGKLVKI  280 (401)
T ss_pred             hhhhccCcCCchhhhhcccCCCcchhhhhcCCCCCCHHHHHHHH-HHHHHHHHHHhcCCcCcccCCcceEEEeCCCEEEE
Confidence                                                   23344 69999999999988       6665       599


Q ss_pred             ecCCcccc-------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHH
Q psy7174         113 VGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQL  172 (188)
Q Consensus       113 ~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~  172 (188)
                      +|||++..             .++..|  +|||.+.+.. ++.++|+||+|+++||+++ |..||......+.+
T Consensus       281 ~DfGla~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~DvwslGvil~e~l~~g~~P~~~~~~~~~~  351 (401)
T cd05107         281 CDFGLARDIMRDSNYISKGSTFLPLKW--MAPESIFNNL-YTTLSDVWSFGILLWEIFTLGGTPYPELPMNEQF  351 (401)
T ss_pred             EecCcceecccccccccCCCcCCCCce--eChHHhcCCC-CCcHhHHHHHHHHHHHHHHcCCCCCCCCCchHHH
Confidence            99998642             234568  9999997755 8999999999999999998 88999776544443

Protein Tyrosine Kinase (PTK) family; Platelet Derived Growth Factor Receptor (PDGFR) beta; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. PDGFR beta is a receptor tyr kinase (RTK) containing an extracellular ligand-binding region with five immunoglobulin-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding to its ligands, the PDGFs, leads to receptor dimerization, trans phosphorylation and activation, and intracellular signaling. PDGFR beta forms homodimers or heterodimers with PDGFR alpha, depending on the nature of the PDGF ligand. PDGF-BB and PDGF-D

>cd06630 STKc_MEKK1 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 1

Probab=99.90  E-value=4e-23  Score=159.08  Aligned_cols=129  Identities=26%  Similarity=0.373  Sum_probs=106.2

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++|+||+++++++        .+....++++||+.+++|..+.        ..+..++ .|++.||
T Consensus        46 ~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~ql~~al  116 (268)
T cd06630          46 VVEALRKEIRLMARLNHPHIIRMLGAT--------CEDSHFNLFVEWMAGGSVSHLLSKYGAFKEAVIINYT-EQLLRGL  116 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCceehhhcee--------ccCCeEEEEEeccCCCcHHHHHHHhCCCCHHHHHHHH-HHHHHHH
Confidence            356788999999999999999999975        4567889999999999998752        3455566 7999999


Q ss_pred             HHHhhcC-------CCC--------eEEEecCCccc---------------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          99 QALKSSM-------PAL--------LKKFVGIGIGR---------------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        99 ~~lH~~~-------~~~--------ilkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      .|||+++       |.|        .+|++|||.+.               ..++..|  +|||.+.+.. ++.++|+||
T Consensus       117 ~~LH~~~i~H~~i~~~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~--~~PE~~~~~~-~~~~~Dv~s  193 (268)
T cd06630         117 SYLHENQIIHRDVKGANLLIDSTGQRLRIADFGAAARLAAKGTGAGEFQGQLLGTIAF--MAPEVLRGEQ-YGRSCDVWS  193 (268)
T ss_pred             HHHHhCCeecCCCCHHHEEEcCCCCEEEEcccccccccccccccCCccccccccccce--eCHhHhccCC-CCcccchHH
Confidence            9999998       222        47999999753               2345678  9999987654 889999999


Q ss_pred             HHHHHHHHHhCCCCCCCCC
Q psy7174         149 VGCIICELLLKAPFLPGES  167 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~  167 (188)
                      +|++++++++|..||...+
T Consensus       194 lG~~l~~l~~g~~p~~~~~  212 (268)
T cd06630         194 VGCVIIEMATAKPPWNAEK  212 (268)
T ss_pred             HHHHHHHHHhCCCCCCCCC
Confidence            9999999999999996543

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 1 (MEKK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK1 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK1 activates the extracellular signal-regulated kinase 1/2 (ERK1/2) and c-Jun N-terminal kinase (JNK) pathways by activating their

>cd07858 STKc_TEY_MAPK_plant Catalytic domain of the Serine/Threonine Kinases, TEY Mitogen-Activated Protein Kinases from Plants

Probab=99.90  E-value=2.7e-23  Score=165.80  Aligned_cols=175  Identities=30%  Similarity=0.448  Sum_probs=126.1

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .    ++..++|.++..  .......+.+|+.+++.++|+||+++++++...   ........++++||+.+ 
T Consensus        18 ~~~vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~ni~~~~~~~~~~---~~~~~~~~~lv~e~~~~-   93 (337)
T cd07858          18 YGIVCSAKNSETNEKVAIKKIANAFDNRIDAKRTLREIKLLRHLDHENVIAIKDIMPPP---HREAFNDVYIVYELMDT-   93 (337)
T ss_pred             CeEEEEEEecCCCCeEEEEEecccccccchhHHHHHHHHHHHhcCCCCccchHHheecc---cccccCcEEEEEeCCCC-
Confidence            566666 2    223334444331  233445678899999999999999999975321   11122457999999974 


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-----------cccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-----------VCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~  124 (188)
                      ++..+        +..+..++ .|++.||.|||+++       |+|+       +||+|||++..           .++.
T Consensus        94 ~L~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~i~H~dlkp~Nil~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~  172 (337)
T cd07858          94 DLHQIIRSSQTLSDDHCQYFL-YQLLRGLKYIHSANVLHRDLKPSNLLLNANCDLKICDFGLARTTSEKGDFMTEYVVTR  172 (337)
T ss_pred             CHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCEEECcCccccccCCCccccccccccc
Confidence            55443        34566677 89999999999988       4444       69999997542           3566


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                      .|  +|||.+.+...++.++|+||+||++|++++|++||.+.+.......+.+..+.|.++.
T Consensus       173 ~y--~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~  232 (337)
T cd07858         173 WY--RAPELLLNCSEYTTAIDVWSVGCIFAELLGRKPLFPGKDYVHQLKLITELLGSPSEED  232 (337)
T ss_pred             Cc--cChHHHhcCCCCCCcccHHHHHHHHHHHHcCCCCCCCCChHHHHHHHHHHhCCCChHH
Confidence            78  9999987544488999999999999999999999998877777777776666655443

Serine/Threonine Kinases (STKs), Plant TEY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TEY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. There are two subtypes of plant MAPKs based on the conserved phosphorylation motif present in the activati

>cd00192 PTKc Catalytic domain of Protein Tyrosine Kinases

Probab=99.90  E-value=6.5e-23  Score=156.76  Aligned_cols=139  Identities=20%  Similarity=0.298  Sum_probs=113.2

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-----------------HHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-----------------HLRYL   89 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-----------------~~~~~   89 (188)
                      ..+.+.+|+++++.++|+||+++++++        .++...++++||++++++..+..                 .+..+
T Consensus        39 ~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~  110 (262)
T cd00192          39 ERKDFLKEARVMKKLGHPNVVRLLGVC--------TEEEPLYLVLEYMEGGDLLDYLRKSRPVFPSPEKSTLSLKDLLSF  110 (262)
T ss_pred             HHHHHHHHHHHHhhcCCCChheeeeee--------cCCCceEEEEEeccCCcHHHHHhhccccccccccccCCHHHHHHH
Confidence            367889999999999999999999975        34678899999999999887632                 23455


Q ss_pred             HHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCCc
Q psy7174          90 ENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGV  142 (188)
Q Consensus        90 ~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~  142 (188)
                      + .|++.||.|||+++       |+|+       +|++|||.+..             .++..|  +|||.+.... ++.
T Consensus       111 ~-~~l~~al~~lH~~~i~H~di~p~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~  186 (262)
T cd00192         111 A-IQIAKGMEYLASKKFVHRDLAARNCLVGEDLVVKISDFGLSRDVYDDDYYRKKTGGKLPIRW--MAPESLKDGI-FTS  186 (262)
T ss_pred             H-HHHHHHHHHHHcCCcccCccCcceEEECCCCcEEEcccccccccccccccccccCCCcCccc--cCHHHhccCC-cch
Confidence            6 79999999999988       6666       69999997542             245578  9999987754 899


Q ss_pred             hhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         143 GIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       143 ~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++|+||+|+++|++++ |..||.+....+....+..
T Consensus       187 ~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~  222 (262)
T cd00192         187 KSDVWSFGVLLWEIFTLGATPYPGLSNEEVLEYLRK  222 (262)
T ss_pred             hhccHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            9999999999999998 6999988776666555554

Protein Tyrosine Kinase (PTK) family, catalytic domain. This PTKc family is part of a larger superfamily that includes the catalytic domains of protein serine/threonine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. They can be classified into receptor and non-receptor tyr kinases. PTKs play important roles in many cellular processes including, lymphocyte activation, epithelium growth and maintenance, metabolism control, organogenesis regulation, survival, proliferation, differentiation, migration, adhesion, motility, and morphogenesis. Receptor tyr kinases (RTKs) are integral membrane proteins which contain an extracellular ligand-binding region, a transmembrane segment, and an intracellular tyr kinase domain. RTKs are usually activated through ligan

>cd07855 STKc_ERK5 Catalytic domain of the Serine/Threonine Kinase, Extracellular signal-Regulated Kinase 5

Probab=99.90  E-value=1.2e-23  Score=167.69  Aligned_cols=151  Identities=32%  Similarity=0.528  Sum_probs=119.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|+.++++++||||++++++|..    ........++++||+.+ ++..+        +..+..++ .|++.|
T Consensus        46 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~----~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~i~-~qi~~a  119 (334)
T cd07855          46 TLAKRTLRELKILRHFKHDNIIAIRDILRP----PGADFKDVYVVMDLMES-DLHHIIHSDQPLTEEHIRYFL-YQLLRG  119 (334)
T ss_pred             cchHHHHHHHHHHHhcCCCCccCHHHhccc----cCCCCceEEEEEehhhh-hHHHHhccCCCCCHHHHHHHH-HHHHHH
Confidence            345678889999999999999999987532    22345678999999964 55553        34566677 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc---------------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR---------------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      |.|||+++       |+|+       +||+|||++.               ..++..|  +|||.+.+...++.++|+||
T Consensus       120 L~~LH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~~~~~~~Di~s  197 (334)
T cd07855         120 LKYIHSANVIHRDLKPSNLLVNEDCELRIGDFGMARGLSSSPTEHKYFMTEYVATRWY--RAPELLLSLPEYTTAIDMWS  197 (334)
T ss_pred             HHHHHHCCeecCCCCHHHEEEcCCCcEEecccccceeecccCcCCCcccccccccccc--cChHHhcCCcccccccchHH
Confidence            99999988       4454       6999999753               2456788  99999866445889999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         149 VGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +||++|+|++|++||.+.+....+..+....+.|++
T Consensus       198 lG~~l~el~~g~~pf~~~~~~~~~~~~~~~~g~~~~  233 (334)
T cd07855         198 VGCIFAEMLGRRQLFPGKNYVHQLKLILSVLGSPSE  233 (334)
T ss_pred             HHHHHHHHHcCCCccCCCChHHHHHHHHHHhCCChh
Confidence            999999999999999998887777777777666654

Serine/Threonine Kinases (STKs), Extracellular signal-Regulated Kinase 5 (ERK5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ERK5 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. ERK5, also called Big MAPK1 (BMK1) or MAPK7, has a unique C-terminal extension, making it approximately twice as big as other MAPKs. This extension contains transcriptional activation capability which is inhibited by the N-terminal half. ERK5 is activated in response to growth factors and stress by a cascade that leads to its phosphorylation by the

>cd05095 PTKc_DDR2 Catalytic domain of the Protein Tyrosine Kinase, Discoidin Domain Receptor 2

Probab=99.90  E-value=7.7e-23  Score=160.23  Aligned_cols=135  Identities=22%  Similarity=0.302  Sum_probs=108.2

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------HH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------HL   86 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------~~   86 (188)
                      ...+++.+|+++++.++|+||+++++++        ..+...++++||+.++++..+..                   .+
T Consensus        61 ~~~~~~~~E~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  132 (296)
T cd05095          61 NARNDFLKEIKIMSRLKDPNIIRLLAVC--------ITSDPLCMITEYMENGDLNQFLSRHEPQEAAEKADVVTISYSTL  132 (296)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEE--------ecCCccEEEEEeCCCCcHHHHHHhcCcccccccccccccCHHHH
Confidence            3456789999999999999999999975        44567899999999999987632                   35


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCC
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARM  139 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~  139 (188)
                      ..++ .|++.||+|||+.+       |+|+       ++++|||++...             ++..|  ++||...... 
T Consensus       133 ~~~~-~~i~~al~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-  208 (296)
T cd05095         133 IFMA-TQIASGMKYLSSLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRW--MSWESILLGK-  208 (296)
T ss_pred             HHHH-HHHHHHHHHHHHCCeecccCChheEEEcCCCCEEeccCcccccccCCcceeccCcCcCcccc--CCHHHHhcCC-
Confidence            5566 79999999999998       6666       489999986522             13457  8999877655 


Q ss_pred             CCchhHHHHHHHHHHHHHh--CCCCCCCCChHHHH
Q psy7174         140 YGVGIDMWAVGCIICELLL--KAPFLPGESDLDQL  172 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~  172 (188)
                      ++.++|+||+||++|||++  |..||...+..+..
T Consensus       209 ~~~~~DiwSlG~~l~el~~~~~~~p~~~~~~~~~~  243 (296)
T cd05095         209 FTTASDVWAFGVTLWEILTLCKEQPYSQLSDEQVI  243 (296)
T ss_pred             ccchhhhhHHHHHHHHHHHhCCCCCccccChHHHH
Confidence            8999999999999999998  77888765544433

Protein Tyrosine Kinase (PTK) family; mammalian Discoidin Domain Receptor 2 (DDR2) and homologs; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR2 is a member of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDR2 binds mostly to fibrillar collagens. More recently, it has been reported to also bind collagen X. DDR2 is widely expressed in many tissues wit

>cd05054 PTKc_VEGFR Catalytic domain of the Protein Tyrosine Kinases, Vascular Endothelial Growth Factor Receptors

Probab=99.90  E-value=4.6e-23  Score=164.69  Aligned_cols=132  Identities=20%  Similarity=0.253  Sum_probs=105.9

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ...+.+.+|+++++++ +|+||++++++|.       ..+...++++||++++++..+..                    
T Consensus        52 ~~~~~~~~E~~~~~~l~~h~niv~~~~~~~-------~~~~~~~~v~ey~~~~~L~~~i~~~~~~~~~~~~~~~~~~~~~  124 (337)
T cd05054          52 SEYKALMTELKILIHIGHHLNVVNLLGACT-------KPGGPLMVIVEYCKFGNLSNYLRSKRECFSPYRNKSTRKREMK  124 (337)
T ss_pred             HHHHHHHHHHHHHHhhccCcchhheeeeEe-------cCCCCEEEEEecCCCCCHHHHHHhccccccccccccccccccc
Confidence            3446678899999999 7999999999752       23457789999999999876531                    


Q ss_pred             -------------------------------------------------HHHHHHHHHHHHHHHHHhhcC-------CCC
Q psy7174          85 -------------------------------------------------HLRYLENQQILEGLQALKSSM-------PAL  108 (188)
Q Consensus        85 -------------------------------------------------~~~~~~~~qi~~gl~~lH~~~-------~~~  108 (188)
                                                                       .+..++ .|++.||+|||+++       |+|
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~aL~~lH~~~ivHrDikp~N  203 (337)
T cd05054         125 QKEGKKQRLDSVSSSQSSASSGFIEDKSLSDVEEDEEGDELYKEPLTLEDLISYS-FQVARGMEFLASRKCIHRDLAARN  203 (337)
T ss_pred             cccccccccccCCccccccccccccCcchhhcccchhhhHHhhcCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCcce
Confidence                                                             234455 79999999999988       666


Q ss_pred             e-------EEEecCCcccc-------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q psy7174         109 L-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGES  167 (188)
Q Consensus       109 i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~  167 (188)
                      +       +||+|||++..             .++..|  +|||++.+.. ++.++||||+||++|++++ |.+||.+..
T Consensus       204 ill~~~~~vkL~DfG~a~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~SlGv~l~el~t~g~~p~~~~~  280 (337)
T cd05054         204 ILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW--MAPESIFDKV-YTTQSDVWSFGVLLWEIFSLGASPYPGVQ  280 (337)
T ss_pred             EEEeCCCcEEEeccccchhcccCcchhhccCCCCCccc--cCcHHhcCCC-CCccccHHHHHHHHHHHHHcCCCCCCCCC
Confidence            6       59999998653             224568  9999998765 8999999999999999997 999997654


Q ss_pred             h
Q psy7174         168 D  168 (188)
Q Consensus       168 ~  168 (188)
                      .
T Consensus       281 ~  281 (337)
T cd05054         281 I  281 (337)
T ss_pred             c
Confidence            3

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor (VEGFR) subfamily; catalytic (c) domain. The VEGFR subfamily consists of VEGFR1 (Flt1), VEGFR2 (Flk1), VEGFR3 (Flt4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR subfamily members are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. In VEGFR3, the fifth Ig-like domain is replaced by a disulfide bridge. The binding of VEGFRs to their ligands, the VEGFs, leads to recepto

>cd05057 PTKc_EGFR_like Catalytic domain of Epidermal Growth Factor Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.1e-22  Score=157.81  Aligned_cols=140  Identities=15%  Similarity=0.206  Sum_probs=112.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      .....+.+|+.++++++||||+++++++.         ....++++||+.+|++....         ..+..++ .|++.
T Consensus        51 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------~~~~~~v~e~~~~g~L~~~l~~~~~~~~~~~~~~~~-~qi~~  120 (279)
T cd05057          51 KANKEILDEAYVMASVDHPHVVRLLGICL---------SSQVQLITQLMPLGCLLDYVRNHKDNIGSQYLLNWC-VQIAK  120 (279)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEEEEEe---------cCceEEEEecCCCCcHHHHHHhccCCCCHHHHHHHH-HHHHH
Confidence            34567889999999999999999999852         25789999999999988752         3455566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      ||+|||+.+       |+|+       +|++|||+++..             ++..|  +|||.+.... ++.++|+||+
T Consensus       121 ~l~~LH~~~i~H~di~p~nil~~~~~~~kL~dfg~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Di~sl  197 (279)
T cd05057         121 GMSYLEEKRLVHRDLAARNVLVKTPQHVKITDFGLAKLLDVDEKEYHAEGGKVPIKW--MALESILHRI-YTHKSDVWSY  197 (279)
T ss_pred             HHHHHHhCCEEecccCcceEEEcCCCeEEECCCcccccccCcccceecCCCcccccc--cCHHHhhcCC-cCchhhHHHH
Confidence            999999988       5555       599999976522             12358  8999987654 8999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+++||+++ |+.||.+.+..+....+...
T Consensus       198 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~  227 (279)
T cd05057         198 GVTVWELMTFGAKPYEGIPAVEIPDLLEKG  227 (279)
T ss_pred             HHHHHHHhcCCCCCCCCCCHHHHHHHHhCC
Confidence            999999998 99999888776665555543

Protein Tyrosine Kinase (PTK) family; Epidermal Growth Factor Receptor (EGFR) subfamily; catalytic (c) domain. EGFR (HER, ErbB) subfamily members include EGFR (HER1, ErbB1), HER2 (ErbB2), HER3 (ErbB3), HER4 (ErbB4), and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. The EGFR proteins are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instea

>cd06648 STKc_PAK_II Catalytic domain of the Protein Serine/Threonine Kinase, Group II p21-activated kinase

Probab=99.90  E-value=6.1e-23  Score=160.11  Aligned_cols=139  Identities=21%  Similarity=0.288  Sum_probs=112.8

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------HHHHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------SHLRYLENQQILEG   97 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------~~~~~~~~~qi~~g   97 (188)
                      ....+.+.+|+.+++.++||||+++++++        ..+...++++||+.++++..+.       ..+..++ .|++.|
T Consensus        57 ~~~~~~~~~e~~~l~~~~h~~vv~~~~~~--------~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~-~ql~~~  127 (285)
T cd06648          57 QQRRELLFNEVVIMRDYQHPNIVEMYSSY--------LVGDELWVVMEFLEGGALTDIVTHTRMNEEQIATVC-LAVLKA  127 (285)
T ss_pred             hhHHHHHHHHHHHHHHcCCCChheEEEEE--------EcCCeEEEEEeccCCCCHHHHHHhCCCCHHHHHHHH-HHHHHH
Confidence            34456688999999999999999999975        4466789999999999998752       3455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      |+|||+++       |+|+       ++++|||...           ..++..|  +|||.+.+.. ++.++|+||+|++
T Consensus       128 l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Dv~slGv~  204 (285)
T cd06648         128 LSFLHAQGVIHRDIKSDSILLTSDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW--MAPEVISRLP-YGTEVDIWSLGIM  204 (285)
T ss_pred             HHHHHhCCeecCCCChhhEEEcCCCcEEEcccccchhhccCCcccccccCCccc--cCHHHhcCCC-CCCcccHHHHHHH
Confidence            99999988       5555       6999999643           2467789  9999987755 8999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHH
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      ++++++|+.||.+.+.......+
T Consensus       205 l~ell~g~~p~~~~~~~~~~~~~  227 (285)
T cd06648         205 VIEMVDGEPPYFNEPPLQAMKRI  227 (285)
T ss_pred             HHHHHhCCCCCcCCCHHHHHHHH
Confidence            99999999999776655444443

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, Group II, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. Group II PAKs, also called non-conventional PAKs, include PAK4, PAK5, and PAK6. Group II PAKs contain PBD (p21-binding domain) and catalytic domains, but lack other motifs foun

>PHA03211 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=2.3e-23  Score=172.41  Aligned_cols=143  Identities=16%  Similarity=0.249  Sum_probs=108.4

Q ss_pred             cccccc-cCC-ccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QSK-WSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~~-~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+ ..+ ....+++|..   ......+|+++|++++|+||+++++++        ..+...++++|++.+ ++..+
T Consensus       182 ~G~Vy~a~~~~~~~~vavK~~---~~~~~~~E~~iL~~L~HpnIv~l~~~~--------~~~~~~~lv~e~~~~-~L~~~  249 (461)
T PHA03211        182 EGCVFESSHPDYPQRVVVKAG---WYASSVHEARLLRRLSHPAVLALLDVR--------VVGGLTCLVLPKYRS-DLYTY  249 (461)
T ss_pred             CeEEEEEEECCCCCEEEEecc---cccCHHHHHHHHHHCCCCCCCcEEEEE--------EECCEEEEEEEccCC-CHHHH
Confidence            566777 222 2223444432   234567899999999999999999975        345678999999964 44443


Q ss_pred             ---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccccc
Q psy7174          83 ---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLYC  126 (188)
Q Consensus        83 ---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y  126 (188)
                               ...+..++ .|++.||.|||+++       |+||       +||+|||++.             ..||..|
T Consensus       250 l~~~~~~l~~~~~~~i~-~qi~~aL~yLH~~gIvHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~~GT~~Y  328 (461)
T PHA03211        250 LGARLRPLGLAQVTAVA-RQLLSAIDYIHGEGIIHRDIKTENVLVNGPEDICLGDFGAACFARGSWSTPFHYGIAGTVDT  328 (461)
T ss_pred             HHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCEEECcCCHHHEEECCCCCEEEcccCCceecccccccccccccCCCcCC
Confidence                     23456666 89999999999998       5565       5999999753             2478899


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL  163 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf  163 (188)
                        +|||++.+.. ++.++|||||||++|||++|..++
T Consensus       329 --~APE~~~~~~-~~~~sDvwSlGviL~El~~g~~~l  362 (461)
T PHA03211        329 --NAPEVLAGDP-YTPSVDIWSAGLVIFEAAVHTASL  362 (461)
T ss_pred             --cCHHHHcCCC-CCchHHHHHHHHHHHHHHHcCCCc
Confidence              9999998765 899999999999999999876544

>cd05574 STKc_phototropin_like Catalytic domain of Phototropin-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=4.3e-23  Score=162.93  Aligned_cols=138  Identities=17%  Similarity=0.236  Sum_probs=113.1

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|+++++.++||||+++++.+        .++...++++||+.+++|..+.          ..+..++ .|+++
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~l~~~~~~~~~-~qi~~  114 (316)
T cd05574          44 KVKRVLTEQEILATLDHPFLPTLYASF--------QTETYLCLVMDYCPGGELFRLLQRQPGKCLSEEVARFYA-AEVLL  114 (316)
T ss_pred             HHHHHHHHHHHHHhCCCCCchhheeee--------ecCCEEEEEEEecCCCCHHHHHHhCCCCccCHHHHHHHH-HHHHH
Confidence            456788999999999999999999975        4466789999999999998752          2345556 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCcccc----------------------------------------cc
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRH----------------------------------------VC  122 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~----------------------------------------~~  122 (188)
                      ||.|||+.+       |+|+       ++++|||++..                                        .|
T Consensus       115 ~l~~lH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  194 (316)
T cd05574         115 ALEYLHLLGIVYRDLKPENILLHESGHIMLSDFDLSKQSDVEPPPVSKALRKGSRRSSVNSIPSETFSEEPSFRSNSFVG  194 (316)
T ss_pred             HHHHHHHCCeeccCCChHHeEEcCCCCEEEeecchhhcccccccccccccccccccccccccchhhhcccccCCCCCCcC
Confidence            999999988       5555       58999997431                                        45


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      +..|  +|||++.+.. ++.++||||+|+++|++++|+.||.+.+....+.++.
T Consensus       195 ~~~y--~aPE~~~~~~-~~~~~Di~slG~ll~~l~~g~~pf~~~~~~~~~~~~~  245 (316)
T cd05574         195 TEEY--IAPEVISGDG-HGSAVDWWTLGILLYEMLYGTTPFKGSNRDETFSNIL  245 (316)
T ss_pred             ccCC--cCHHHHcCCC-CCchHHHHHHHHHHHHHhhCCCCCCCCchHHHHHHHh
Confidence            6679  9999998755 8999999999999999999999998877666665554

Serine/Threonine Kinases (STKs), Phototropin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The phototropin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Included in this subfamily are plant phototropins and predominantly uncharacterized fungal STKs whose catalytic domains resemble the phototropin kinase domain. One protein from Neurospora crassa is called nrc-2. Phototropins are blue-light receptors that control responses such as phototropism, stromatal opening, and chloroplast movement in order to optimize the photosynthetic efficiency of plants. They are light-activated STKs that contain an N-termin

>cd05577 STKc_GRK Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase

Probab=99.90  E-value=6.1e-23  Score=159.27  Aligned_cols=152  Identities=18%  Similarity=0.199  Sum_probs=116.4

Q ss_pred             ccccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           4 VCFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         4 ~~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      -||.||+ .    ++..++|.+.+.   .....+.+.+|++++++++||||+++++++        ..+...++++||+.
T Consensus         5 ~~g~vy~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~   76 (277)
T cd05577           5 GFGEVCACQVKATGKMYACKKLDKKRLKKRKGEQMALNEKKILEKVSSRFIVSLAYAF--------ETKDDLCLVMTLMN   76 (277)
T ss_pred             CceeEEEEEEcCCCcEEEEEEEehhhhhhhhhhHHHHHHHHHHHhCCCCCEeeeeeEE--------ecCCeEEEEEecCC
Confidence            3788887 2    233334444332   123345667899999999999999999875        34567899999999


Q ss_pred             cccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------cc
Q psy7174          76 KTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HV  121 (188)
Q Consensus        76 ~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~  121 (188)
                      +++|..+          +..+..++ .|++.||.|||+.+       |.|+       +|++|||.+.          ..
T Consensus        77 ~~~L~~~l~~~~~~~~~~~~~~~~~-~ql~~~l~~lH~~~i~H~di~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~  155 (277)
T cd05577          77 GGDLKYHIYNVGEPGFPEARAIFYA-AQIICGLEHLHQRRIVYRDLKPENVLLDDHGNVRISDLGLAVELKGGKKIKGRA  155 (277)
T ss_pred             CCcHHHHHHHcCcCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCHHHEEECCCCCEEEccCcchhhhccCCcccccc
Confidence            9998764          23455566 79999999999998       4444       6999999754          23


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      ++..|  +|||.+.+.. ++.++|+||+|++++++++|+.||.+..
T Consensus       156 ~~~~y--~~PE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~  198 (277)
T cd05577         156 GTPGY--MAPEVLQGEV-YDFSVDWFALGCTLYEMIAGRSPFRQRK  198 (277)
T ss_pred             CCCCc--CCHHHhcCCC-CCchhhhHHHHHHHHHHhhCCCCCCCCc
Confidence            46678  9999987765 8899999999999999999999997654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors, which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. GRKs contain a central catalytic domain, flanked by N- and C-terminal extensions. The N-terminus contains an RGS (regulator of

>cd06637 STKc_TNIK Catalytic domain of the Protein Serine/Threonine Kinase, Traf2- and Nck-interacting kinase

Probab=99.90  E-value=1.1e-22  Score=156.99  Aligned_cols=159  Identities=18%  Similarity=0.242  Sum_probs=114.8

Q ss_pred             cccccc-cCC-cccccccccc--chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSK-WSPNTPMARC--DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~-~~~~~~i~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||. ..+ ....+++|..  .......+.+|+.+++++ +||||++++++|.....  ...+...++++||++++++
T Consensus        19 ~g~vy~~~~~~~~~~~aik~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~~~~~~~iv~e~~~~~~L   96 (272)
T cd06637          19 YGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP--PGMDDQLWLVMEFCGAGSV   96 (272)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEEcCCccHHHHHHHHHHHHHhcCCCCeeeEeeEEeecCC--CCCCcEEEEEEEcCCCCcH
Confidence            567776 211 1123334432  233446788999999998 69999999998643211  1123467899999999998


Q ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          80 ARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        80 ~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ..+.          ..+..++ .|++.||.|||+++       |+|+       +|++|||++.           ..|+.
T Consensus        97 ~~~l~~~~~~~l~~~~~~~~~-~qi~~~l~~LH~~~ivh~dl~~~nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~g~~  175 (272)
T cd06637          97 TDLIKNTKGNTLKEEWIAYIC-REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP  175 (272)
T ss_pred             HHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHCCCccCCCCHHHEEECCCCCEEEccCCCceecccccccCCcccccc
Confidence            8752          3345566 79999999999998       4444       6999999854           34567


Q ss_pred             cccCCCCcccccc----CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         125 YCTRGAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       125 ~y~~~aPe~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      .|  +|||++...    ..++.++|+||+||++|+|++|..||....+
T Consensus       176 ~y--~aPE~~~~~~~~~~~~~~~~Dv~slGv~l~el~~g~~p~~~~~~  221 (272)
T cd06637         176 YW--MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHP  221 (272)
T ss_pred             cc--cCHhHhccccCcCCCCCchhhHHHHHHHHHHHHhCCCCccccCH
Confidence            89  999998531    2378899999999999999999999965443

Serine/threonine kinases (STKs), Traf2- and Nck-interacting kinase (TNIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TNIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain, similar to mitogen-activated protein kinase (MAPK), kinase kinase kinase 4 (MAP4K4), and MAP4K6. MAP4Ks participate in some MAPK signaling pathways by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). TNIK is an effector of Rap2, a small GTP-binding protein from the Ras family. TNIK specifically activ

>cd06621 PKc_MAPKK_Pek1_like Catalytic domain of fungal Pek1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=9.9e-23  Score=158.95  Aligned_cols=131  Identities=23%  Similarity=0.351  Sum_probs=106.2

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQ   93 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~q   93 (188)
                      ....++.+|++++++++||||++++++|..      ......++++||+.+++|..+.            ..+..++ .|
T Consensus        41 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~l~~~~~~~i~-~~  113 (287)
T cd06621          41 DLQKQILRELEINKSCKSPYIVKYYGAFLD------ESSSSIGIAMEYCEGGSLDSIYKKVKKRGGRIGEKVLGKIA-ES  113 (287)
T ss_pred             HHHHHHHHHHHHHHhCCCCCeeeeeeEEEc------cCCCeEEEEEEecCCCCHHHHHHHHHhcCCCCCHHHHHHHH-HH
Confidence            345678999999999999999999997632      3345689999999999987642            2344566 79


Q ss_pred             HHHHHHHHhhcC-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          94 ILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        94 i~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ++.||.|||+.+       +.|+       ++++|||++.         ..++..|  +|||.+.+.. ++.++|+||+|
T Consensus       114 i~~~L~~lH~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~y--~~pE~~~~~~-~~~~~Dv~slG  190 (287)
T cd06621         114 VLKGLSYLHSRKIIHRDIKPSNILLTRKGQVKLCDFGVSGELVNSLAGTFTGTSFY--MAPERIQGKP-YSITSDVWSLG  190 (287)
T ss_pred             HHHHHHHHHHCCcccCCCCHHHEEEecCCeEEEeeccccccccccccccccCCccc--cCHHHhcCCC-CCchhhHHHHH
Confidence            999999999988       4444       6999999754         2356678  9999987755 89999999999


Q ss_pred             HHHHHHHhCCCCCCCC
Q psy7174         151 CIICELLLKAPFLPGE  166 (188)
Q Consensus       151 ~il~el~~g~~pf~~~  166 (188)
                      |++|+|++|..||...
T Consensus       191 ~il~~l~~g~~p~~~~  206 (287)
T cd06621         191 LTLLEVAQNRFPFPPE  206 (287)
T ss_pred             HHHHHHHhCCCCCCcc
Confidence            9999999999999755

Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd05110 PTKc_HER4 Catalytic domain of the Protein Tyrosine Kinase, HER4

Probab=99.90  E-value=8.6e-23  Score=160.59  Aligned_cols=135  Identities=16%  Similarity=0.204  Sum_probs=106.4

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl   98 (188)
                      ...+.+|+.+++.++||||++++++|.         ....++++||+++|++..+.         ..+..++ .|++.||
T Consensus        53 ~~~~~~e~~~~~~l~h~niv~~~~~~~---------~~~~~~v~e~~~~g~l~~~~~~~~~~~~~~~~~~~~-~qi~~~L  122 (303)
T cd05110          53 NVEFMDEALIMASMDHPHLVRLLGVCL---------SPTIQLVTQLMPHGCLLDYVHEHKDNIGSQLLLNWC-VQIAKGM  122 (303)
T ss_pred             HHHHHHHHHHHHhCCCCCcccEEEEEc---------CCCceeeehhcCCCCHHHHHHhcccCCCHHHHHHHH-HHHHHHH
Confidence            346789999999999999999999752         22457899999999888752         2344555 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      .|||+++       |+|+       +|++|||++...             ++..|  +|||.+.+.. ++.++|+||||+
T Consensus       123 ~~LH~~~ivH~dikp~Nill~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~DiwslG~  199 (303)
T cd05110         123 MYLEERRLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKW--MALECIHYRK-FTHQSDVWSYGV  199 (303)
T ss_pred             HHHhhcCeeccccccceeeecCCCceEEccccccccccCcccccccCCCcccccc--CCHHHhccCC-CChHHHHHHHHH
Confidence            9999988       6666       599999986521             24468  9999987655 899999999999


Q ss_pred             HHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         152 IICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       152 il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      ++||+++ |..||.+....+....+
T Consensus       200 ~l~el~t~g~~p~~~~~~~~~~~~~  224 (303)
T cd05110         200 TIWELMTFGGKPYDGIPTREIPDLL  224 (303)
T ss_pred             HHHHHHhCCCCCCCCCCHHHHHHHH
Confidence            9999997 89999876654444333

Protein Tyrosine Kinase (PTK) family; HER4 (ErbB4); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. HER4 is a member of the EGFR (HER, ErbB) subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular EGF-related ligand-binding region, a transmembrane helix, and a cytoplasmic region with a tyr kinase domain and a regulatory C-terminal tail. Unlike other tyr kinases, phosphorylation of the activation loop of EGFR proteins is not critical to their activation. Instead, they are activated by ligand-induced dimerization, leading to the phosphorylation of tyr residues in the C-terminal tail, which serve as bindin

>cd08217 STKc_Nek2 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 2

Probab=99.90  E-value=1.1e-22  Score=155.81  Aligned_cols=162  Identities=23%  Similarity=0.290  Sum_probs=119.1

Q ss_pred             cccccc-cC----Cccccccccc--cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMAR--CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|.||+ .+    ...++|.++.  ......+.+.+|++++++++||||+++++++..      ..+...++++||++++
T Consensus        13 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~~~~~~e~~~~~   86 (265)
T cd08217          13 FGTVRKVRRKSDGKILVWKEIDYGNMTEKEKQQLVSEVNILRELKHPNIVRYYDRIID------RSNQTLYIVMEYCEGG   86 (265)
T ss_pred             CeEEEEeeecCCCCEEEEEEEecccCCHHHHHHHHHHHHHHHhcCCCccceeeeeeec------CCCCEEEEEehhccCC
Confidence            677776 22    2222333332  233445678899999999999999999987522      2345679999999999


Q ss_pred             cHHHHH------------HHHHHHHHHHHHHHHHHHh-----hcC-------CCCe-------EEEecCCccc-------
Q psy7174          78 TKARFY------------SHLRYLENQQILEGLQALK-----SSM-------PALL-------KKFVGIGIGR-------  119 (188)
Q Consensus        78 ~l~~~~------------~~~~~~~~~qi~~gl~~lH-----~~~-------~~~i-------lkl~dfg~~~-------  119 (188)
                      ++..+.            ..+..++ .|++.||.|||     +.+       |+|+       +|++|||+..       
T Consensus        87 ~L~~~l~~~~~~~~~l~~~~~~~~~-~~i~~~l~~lH~~~~~~~~i~h~dl~p~nili~~~~~~kl~d~g~~~~~~~~~~  165 (265)
T cd08217          87 DLAQLIQKCKKERKYIEEEFIWRIL-TQLLLALYECHNRSDPGNTVLHRDLKPANIFLDANNNVKLGDFGLAKILGHDSS  165 (265)
T ss_pred             CHHHHHHHHhhcccCCCHHHHHHHH-HHHHHHHHHHhcCccccCcceecCCCHHHEEEecCCCEEEecccccccccCCcc
Confidence            987653            2345556 79999999999     655       4444       6999999744       


Q ss_pred             ----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         120 ----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       120 ----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                          ..++..|  +|||.+.+.. ++.++|+||||++++++++|+.||.+.+.......+.
T Consensus       166 ~~~~~~~~~~~--~~pE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~  223 (265)
T cd08217         166 FAKTYVGTPYY--MSPEQLNHMS-YDEKSDIWSLGCLIYELCALSPPFTARNQLQLASKIK  223 (265)
T ss_pred             cccccccCCCc--cChhhhcCCC-CCchhHHHHHHHHHHHHHHCCCcccCcCHHHHHHHHh
Confidence                3467788  9999997755 8899999999999999999999998776544444443

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 2 (Nek2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek2 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek2 subfamily includes Aspergillus nidulans NIMA kinase, the founding member of the Nek family, which was identified in a screen for cell cycle mutants prevented from entering mitosis. NIMA is essential for mitotic entry and progression through mitosis, and its degradation is essential for mitotic exi

>cd05112 PTKc_Itk Catalytic domain of the Protein Tyrosine Kinase, Interleukin-2-inducible T-cell Kinase

Probab=99.90  E-value=1.4e-22  Score=155.15  Aligned_cols=159  Identities=16%  Similarity=0.188  Sum_probs=118.9

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      +|.||+ .   ++..++|.+++.. .....+.+|++++++++||||+++++++        ......++++||+.+++|.
T Consensus        17 ~g~v~~~~~~~~~~~~~k~~~~~~-~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~   87 (256)
T cd05112          17 FGLVWLGYWLEKRKVAIKTIREGA-MSEEDFIEEAQVMMKLSHPKLVQLYGVC--------TERSPICLVFEFMEHGCLS   87 (256)
T ss_pred             cceEEEEEEeCCCeEEEEECCCCC-CCHHHHHHHHHHHHhCCCCCeeeEEEEE--------ccCCceEEEEEcCCCCcHH
Confidence            677776 1   2233344443321 2235688999999999999999999975        3455789999999999987


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc------------cccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~  125 (188)
                      .+.         ..+..+. .|++.|++|||+.+       |+|+       +|++|||++...            ++..
T Consensus        88 ~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~~i~h~dl~p~ni~i~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~  166 (256)
T cd05112          88 DYLRAQRGKFSQETLLGMC-LDVCEGMAYLESSNVIHRDLAARNCLVGENQVVKVSDFGMTRFVLDDQYTSSTGTKFPVK  166 (256)
T ss_pred             HHHHhCccCCCHHHHHHHH-HHHHHHHHHHHHCCccccccccceEEEcCCCeEEECCCcceeecccCcccccCCCccchh
Confidence            652         2345555 79999999999988       5555       699999976422            2346


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~  176 (188)
                      |  +|||.+.+.. ++.++|+||+|+++|++++ |.+||...........+.
T Consensus       167 ~--~aPe~~~~~~-~~~~~Dv~slG~~l~el~~~g~~p~~~~~~~~~~~~~~  215 (256)
T cd05112         167 W--SSPEVFSFSK-YSSKSDVWSFGVLMWEVFSEGKTPYENRSNSEVVETIN  215 (256)
T ss_pred             h--cCHhHhccCC-cChHHHHHHHHHHHHHHHcCCCCCCCcCCHHHHHHHHh
Confidence            8  9999987654 8899999999999999998 999998776655555543

Protein Tyrosine Kinase (PTK) family; Interleukin-2 (IL-2)-inducible T-cell kinase (Itk); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Itk (also known as Tsk or Emt) is a member of the Tec subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases with similarity to Src kinases in that they contain Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Unlike Src kinases, most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activ

>cd08216 PK_STRAD Pseudokinase domain of STE20-related kinase adapter protein

Probab=99.90  E-value=6.1e-23  Score=161.86  Aligned_cols=134  Identities=19%  Similarity=0.234  Sum_probs=108.5

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQI   94 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi   94 (188)
                      ....+.+.+|++++++++||||+++++++        .++...++++||++++++..+.          ..+..++ +|+
T Consensus        40 ~~~~~~~~~Ei~~l~~l~h~~i~~~~~~~--------~~~~~~~~~~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~~l  110 (314)
T cd08216          40 KEDLKLLQQEIITSRQLQHPNILPYVTSF--------IVDSELYVVSPLMAYGSCEDLLKTHFPEGLPELAIAFIL-KDV  110 (314)
T ss_pred             hhHHHHHHHHHHHHHhcCCcchhhhhhee--------ecCCeEEEEEeccCCCCHHHHHHHhcccCCCHHHHHHHH-HHH
Confidence            44556889999999999999999999975        4566789999999999987752          3456666 899


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc------------------ccccccccCCCCcccccc-CCCC
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR------------------HVCTLYCTRGAPELLFGA-RMYG  141 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~~-~~~~  141 (188)
                      +.||+|||+++       |+|+       +|++|||...                  ..++..|  +|||.+... ..++
T Consensus       111 ~~~L~~LH~~~ivH~dlk~~Nili~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~  188 (314)
T cd08216         111 LNALDYIHSKGFIHRSVKASHILLSGDGKVVLSGLRYSVSMIKHGKRQRVVHDFPKSSVKNLPW--LSPEVLQQNLQGYN  188 (314)
T ss_pred             HHHHHHHHHCCeecCCCCcceEEEecCCceEEecCccceeeccccccccccccccccccccccc--cCHHHhcCCCCCCC
Confidence            99999999988       5665       5899998642                  1245568  999998653 2488


Q ss_pred             chhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         142 VGIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       142 ~~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                      .++|+||+||+++++++|++||......
T Consensus       189 ~~~Diws~G~il~el~~g~~pf~~~~~~  216 (314)
T cd08216         189 EKSDIYSVGITACELANGHVPFKDMPAT  216 (314)
T ss_pred             cchhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence            9999999999999999999999765543

Protein Kinase family, STE20-related kinase adapter protein (STRAD) subfamily, pseudokinase domain. The STRAD subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpigmentation of the buc

>PHA03210 serine/threonine kinase US3; Provisional

Probab=99.90  E-value=4e-23  Score=173.01  Aligned_cols=142  Identities=20%  Similarity=0.262  Sum_probs=108.7

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH------------HHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF------------YSHLRYLENQQI   94 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~------------~~~~~~~~~~qi   94 (188)
                      ..+.+.+|+++|++++||||+++++++        ..+...+++++++....+..+            ...++.++ .|+
T Consensus       206 ~~~~~~~Ei~il~~l~HpnIv~l~~~~--------~~~~~~~lv~e~~~~~l~~~l~~~~~~~~~~~~~~~~~~i~-~ql  276 (501)
T PHA03210        206 AAIQLENEILALGRLNHENILKIEEIL--------RSEANTYMITQKYDFDLYSFMYDEAFDWKDRPLLKQTRAIM-KQL  276 (501)
T ss_pred             HHHHHHHHHHHHHhCCCCCcCcEeEEE--------EECCeeEEEEeccccCHHHHHhhccccccccccHHHHHHHH-HHH
Confidence            345678999999999999999999986        345677899998865444322            23455566 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      +.||.|||+++       |+||       +||+|||++.            ..||..|  +|||++.+.. ++.++||||
T Consensus       277 ~~aL~yLH~~gIiHrDLKP~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwS  353 (501)
T PHA03210        277 LCAVEYIHDKKLIHRDIKLENIFLNCDGKIVLGDFGTAMPFEKEREAFDYGWVGTVAT--NSPEILAGDG-YCEITDIWS  353 (501)
T ss_pred             HHHHHHHHhCCeecCCCCHHHEEECCCCCEEEEeCCCceecCcccccccccccCCcCC--CCchhhcCCC-CCcHHHHHH
Confidence            99999999998       5565       5999999864            3578899  9999998765 999999999


Q ss_pred             HHHHHHHHHhCCC-CCCC--CChHHHHHHHHhhcC
Q psy7174         149 VGCIICELLLKAP-FLPG--ESDLDQLTRIFQTLG  180 (188)
Q Consensus       149 lG~il~el~~g~~-pf~~--~~~~~~~~~i~~~~~  180 (188)
                      +||++|||++|.. |+.+  .++...+.++...+.
T Consensus       354 lGvil~ell~~~~~p~~~~~~~~~~~~~~~~~~~~  388 (501)
T PHA03210        354 CGLILLDMLSHDFCPIGDGGGKPGKQLLKIIDSLS  388 (501)
T ss_pred             HHHHHHHHHHCCCCCccCCCCCHHHHHHHHHHhcc
Confidence            9999999999875 4432  234455555555444

>cd05097 PTKc_DDR_like Catalytic domain of Discoidin Domain Receptor-like Protein Tyrosine Kinases

Probab=99.90  E-value=1.1e-22  Score=159.20  Aligned_cols=137  Identities=23%  Similarity=0.287  Sum_probs=108.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------H
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------H   85 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------~   85 (188)
                      ...+.+.+|++++++++|||++++++++        ..+...+++|||+.++++..+..                    .
T Consensus        59 ~~~~~~~~ei~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  130 (295)
T cd05097          59 TARNDFLKEIKIMSRLKNPNIIRLLGVC--------VSDDPLCMITEYMENGDLNQFLSQREIESTFTHANNIPSVSIAN  130 (295)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcCeEEEEE--------cCCCccEEEEecCCCCcHHHHHHhccccccccccccCCcccHHH
Confidence            3445788999999999999999999975        45667899999999999877532                    2


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccC
Q psy7174          86 LRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGAR  138 (188)
Q Consensus        86 ~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~  138 (188)
                      +..++ .|++.||.|||+.+       |+|+       +|++|||++..             .++..|  +|||.+.+..
T Consensus       131 ~~~i~-~~i~~al~~lH~~~i~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~  207 (295)
T cd05097         131 LLYMA-VQIASGMKYLASLNFVHRDLATRNCLVGNHYTIKIADFGMSRNLYSGDYYRIQGRAVLPIRW--MAWESILLGK  207 (295)
T ss_pred             HHHHH-HHHHHHHHHHHhcCeeccccChhhEEEcCCCcEEecccccccccccCcceeccCcCcCceee--cChhhhccCC
Confidence            34455 79999999999988       6665       59999998642             124468  9999987755


Q ss_pred             CCCchhHHHHHHHHHHHHHh--CCCCCCCCChHHHHHH
Q psy7174         139 MYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTR  174 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~  174 (188)
                       ++.++|+|||||++++|++  +..||...+..+....
T Consensus       208 -~~~~~DvwSlG~~l~el~~~~~~~p~~~~~~~~~~~~  244 (295)
T cd05097         208 -FTTASDVWAFGVTLWEMFTLCKEQPYSLLSDEQVIEN  244 (295)
T ss_pred             -cCchhhHHHHHHHHHHHHHcCCCCCCcccChHHHHHH
Confidence             8999999999999999987  6778876655444433

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR)-like proteins; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR-like proteins are members of the DDR subfamily, which are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linked to a variety of human cancers including

>cd06636 STKc_MAP4K4_6 Catalytic domain of the Protein Serine/Threonine Kinases, Mitogen-Activated Protein Kinase Kinase Kinase Kinase 4 and 6

Probab=99.90  E-value=1.2e-22  Score=157.78  Aligned_cols=162  Identities=19%  Similarity=0.256  Sum_probs=116.4

Q ss_pred             cccccc-cC-Ccccccccccc--chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS-KWSPNTPMARC--DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~-~~~~~~~i~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||. .. +....+++|..  .......+.+|+.+++++ +||||+++++++....  ....+...+++|||++++++
T Consensus        29 ~~~v~~~~~~~~~~~~a~K~~~~~~~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~--~~~~~~~~~iv~e~~~~~~L  106 (282)
T cd06636          29 YGQVYKGRHVKTGQLAAIKVMDVTEDEEEEIKLEINMLKKYSHHRNIATYYGAFIKKS--PPGHDDQLWLVMEFCGAGSV  106 (282)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecChHHHHHHHHHHHHHHHhcCCCcEEEEeeehhccc--ccCCCCEEEEEEEeCCCCcH
Confidence            566776 22 11123334432  223445678899999998 6999999999864321  11235678999999999998


Q ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          80 ARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        80 ~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ..+.          ..+..++ .|+++||.|||+.+       |+|+       ++++|||++.           ..++.
T Consensus       107 ~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~~ivH~dl~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~  185 (282)
T cd06636         107 TDLVKNTKGNALKEDWIAYIC-REILRGLAHLHAHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP  185 (282)
T ss_pred             HHHHHHccCCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEeeCcchhhhhccccCCCcccccc
Confidence            8753          2345566 79999999999988       4444       6999999753           34567


Q ss_pred             cccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         125 YCTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       125 ~y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                      .|  +|||.+..    ...++.++|+||+||++|++++|.+||....+...
T Consensus       186 ~y--~aPE~l~~~~~~~~~~~~~~DvwslG~~l~el~~g~~p~~~~~~~~~  234 (282)
T cd06636         186 YW--MAPEVIACDENPDATYDYRSDIWSLGITAIEMAEGAPPLCDMHPMRA  234 (282)
T ss_pred             cc--cCHhhcCcccCcCcCCCcccchhHHHHHHHHHHhCCCCccccCHHhh
Confidence            79  99999853    12378899999999999999999999976554333

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase kinase 4 (MAPKKKK4 or MAP4K4) and MAPKKKK6 (or MAP4K6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAP4K4/MAP4K6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily contain an N-terminal catalytic domain and a C-terminal citron homology (CNH) regulatory domain. MAP4Ks (or MAPKKKKs) are involved in MAPK signaling pathways that are important in mediating cellular responses to extracellular signals by activating a MAPK kinase kinase (MAPKKK or MAP3K or MKKK). Ea

>cd07879 STKc_p38delta_MAPK13 Catalytic domain of the Serine/Threonine Kinase, p38delta Mitogen-Activated Protein Kinase

Probab=99.90  E-value=3e-23  Score=165.92  Aligned_cols=150  Identities=28%  Similarity=0.479  Sum_probs=115.1

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH------HHHHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF------YSHLRYLENQQILEGLQAL  101 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~------~~~~~~~~~~qi~~gl~~l  101 (188)
                      ...+.+|+++++.++||||++++++|....  ........++++||+.. ++...      .+.+..++ .|++.||+||
T Consensus        58 ~~~~~~e~~~l~~l~h~niv~~~~~~~~~~--~~~~~~~~~lv~e~~~~-~l~~~~~~~~~~~~~~~~~-~qi~~aL~~L  133 (342)
T cd07879          58 AKRAYRELTLLKHMQHENVIGLLDVFTSAV--SGDEFQDFYLVMPYMQT-DLQKIMGHPLSEDKVQYLV-YQMLCGLKYI  133 (342)
T ss_pred             hhHHHHHHHHHHhcCCCCccchhheecccc--cCCCCceEEEEeccccc-CHHHHHcCCCCHHHHHHHH-HHHHHHHHHH
Confidence            456789999999999999999999863211  11122356899999864 45442      34566666 7999999999


Q ss_pred             hhcC-------CCCe-------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC
Q psy7174         102 KSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK  159 (188)
Q Consensus       102 H~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g  159 (188)
                      |+.+       |+|+       +|++|||++.        ..++..|  +|||.+.+...++.++|+||+||++|++++|
T Consensus       134 H~~~i~H~dlkp~NIll~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slGvil~el~~g  211 (342)
T cd07879         134 HSAGIIHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWY--RAPEVILNWMHYNQTVDIWSVGCIMAEMLTG  211 (342)
T ss_pred             HHCCcccCCCCHHHEEECCCCCEEEeeCCCCcCCCCCCCCceeeecc--cChhhhcCccccCchHHHHHHHHHHHHHHhC
Confidence            9988       4454       6999999865        3456779  9999987644488999999999999999999


Q ss_pred             CCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         160 APFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       160 ~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      +.||.+.+....+..+....+.|.
T Consensus       212 ~~pf~~~~~~~~~~~~~~~~~~~~  235 (342)
T cd07879         212 KTLFKGKDYLDQLTQILKVTGVPG  235 (342)
T ss_pred             CCCCCCCCHHHHHHHHHHhcCCCC
Confidence            999998887777777766655443

Serine/Threonine Kinases (STKs), p38delta subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38delta subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38delta, also called MAPK13

>cd07856 STKc_Sty1_Hog1 Catalytic domain of the Serine/Threonine Kinases, Fungal Mitogen-Activated Protein Kinases Sty1 and Hog1

Probab=99.90  E-value=9.1e-23  Score=162.39  Aligned_cols=145  Identities=31%  Similarity=0.548  Sum_probs=112.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~   99 (188)
                      ..+.+.+|++++++++||||+++.++|.       ..+...++++||+. +++..+       ...+..++ .|+++||.
T Consensus        52 ~~~~~~~E~~~l~~l~hpniv~~~~~~~-------~~~~~~~lv~e~~~-~~L~~~~~~~~~~~~~~~~~~-~ql~~aL~  122 (328)
T cd07856          52 LAKRTYRELKLLKHLRHENIISLSDIFI-------SPLEDIYFVTELLG-TDLHRLLTSRPLEKQFIQYFL-YQILRGLK  122 (328)
T ss_pred             hhHHHHHHHHHHHhcCCCCeeeEeeeEe-------cCCCcEEEEeehhc-cCHHHHHhcCCCCHHHHHHHH-HHHHHHHH
Confidence            4567889999999999999999999752       12446789999984 566554       23355566 79999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL  157 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~  157 (188)
                      |||+.+       |.|+       +|++|||.+.        ..++..|  +|||.+.+...++.++|+||+||++|+++
T Consensus       123 ~LH~~~iiH~dl~p~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Dv~slG~il~el~  200 (328)
T cd07856         123 YVHSAGVVHRDLKPSNILINENCDLKICDFGLARIQDPQMTGYVSTRYY--RAPEIMLTWQKYDVEVDIWSAGCIFAEML  200 (328)
T ss_pred             HHHhCCcccCCCCHHHEeECCCCCEEeCccccccccCCCcCCCcccccc--cCceeeeccCCcCcHHHHHHHHHHHHHHH
Confidence            999998       4554       6999999754        2356678  99998865344899999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         158 LKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       158 ~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      +|++||.+.+.......+.+.++.|
T Consensus       201 tg~~~f~~~~~~~~~~~~~~~~~~~  225 (328)
T cd07856         201 EGKPLFPGKDHVNQFSIITDLLGTP  225 (328)
T ss_pred             hCCCCCCCCCHHHHHHHHHHHhCCC
Confidence            9999998887766655555554443

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) Sty1/Hog1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Sty1/Hog1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs Sty1 from Schizosaccharomyces pombe, Hog1 from Saccharomyces cerevisiae, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. Sty1 and Hog1 are stress-activated MAPKs that partipate in transcriptional regulation in response to stress. Sty1 is activated in response to oxidative stress, osmotic stress, and U

>cd08225 STKc_Nek5 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 5

Probab=99.90  E-value=1.2e-22  Score=155.45  Aligned_cols=140  Identities=21%  Similarity=0.283  Sum_probs=111.5

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQIL   95 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~   95 (188)
                      ...+.+.+|++++++++|+||+++++.+        ..+...++++||++++++..+.          ..+..++ .|++
T Consensus        41 ~~~~~~~~E~~~l~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~-~~l~  111 (257)
T cd08225          41 KEKEASKKEVILLAKMKHPNIVTFFASF--------QENGRLFIVMEYCDGGDLMKRINRQRGVLFSEDQILSWF-VQIS  111 (257)
T ss_pred             hhhHHHHHHHHHHHhCCCCChhhhhhee--------ccCCeEEEEEecCCCCcHHHHHHhccCCCCCHHHHHHHH-HHHH
Confidence            3456778999999999999999999975        4566889999999999987652          3355566 7999


Q ss_pred             HHHHHHhhcC-------CCC--------eEEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          96 EGLQALKSSM-------PAL--------LKKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~--------ilkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      +||.|||+.+       |.|        .+|++|||.+.           ..++..|  +|||...+.. ++.++|+||+
T Consensus       112 ~~l~~lh~~~i~H~dl~~~nil~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~--~ape~~~~~~-~~~~~Dv~sl  188 (257)
T cd08225         112 LGLKHIHDRKILHRDIKSQNIFLSKNGMVAKLGDFGIARQLNDSMELAYTCVGTPYY--LSPEICQNRP-YNNKTDIWSL  188 (257)
T ss_pred             HHHHHHHHCCcccccCCHHHEEEcCCCCeEEecccccchhccCCcccccccCCCccc--cCHHHHcCCC-CCchhhHHHH
Confidence            9999999987       333        35899999753           2366678  9999987655 8899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |++++++++|..||...+..+....+..
T Consensus       189 G~il~~l~~g~~p~~~~~~~~~~~~~~~  216 (257)
T cd08225         189 GCVLYELCTLKHPFEGNNLHQLVLKICQ  216 (257)
T ss_pred             HHHHHHHHhCCCCCCCccHHHHHHHHhc
Confidence            9999999999999987766555544433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 5 (Nek5) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek5 subfamily is one of a family of 11 different Neks (Nek1-11). The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Neks are involved in the regulation of downstream processes following the activation of Cdc2, and many of their functions are cell cycle-related. They play critical roles in microtubule dynamics during ciliogenesis and mitosis. The specific function of Nek5 is unknown.

>KOG0665|consensus

Probab=99.90  E-value=4.9e-24  Score=163.15  Aligned_cols=155  Identities=30%  Similarity=0.513  Sum_probs=128.3

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----HHHHHHHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----~~~~~~~~~~qi~~gl~   99 (188)
                      ....+++.+|..++..++|+||++++.+|....  +...-...|+|||++.....+..     -..++++. .|.+.|++
T Consensus        56 ~~~akra~rel~l~~~v~~~nii~l~n~ftP~~--~l~~~~e~y~v~e~m~~nl~~vi~~elDH~tis~i~-yq~~~~ik  132 (369)
T KOG0665|consen   56 QTHAKRAYRELKLMKCVNHKNIISLLNVFTPQK--TLEEFQEVYLVMELMDANLCQVILMELDHETISYIL-YQMLCGIK  132 (369)
T ss_pred             CccchhhhhhhhhhhhhcccceeeeeeccCccc--cHHHHHhHHHHHHhhhhHHHHHHHHhcchHHHHHHH-HHHHHHHH
Confidence            344567889999999999999999999974321  22223466999999966554433     24578888 89999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~e  155 (188)
                      |||+.+       |+|+       +||.|||+++          .+.|..|  +|||++.+.. |...+||||+||++.|
T Consensus       133 ~lhs~~IihRdLkPsnivv~~~~~lKi~dfg~ar~e~~~~~mtpyVvtRyy--rapevil~~~-~ke~vdiwSvGci~gE  209 (369)
T KOG0665|consen  133 HLHSAGIIHRDLKPSNIVVNSDCTLKILDFGLARTEDTDFMMTPYVVTRYY--RAPEVILGMG-YKENVDIWSVGCIMGE  209 (369)
T ss_pred             HHHhcceeecccCcccceecchhheeeccchhhcccCcccccCchhheeec--cCchheeccC-CcccchhhhhhhHHHH
Confidence            999998       7777       5999999866          3445678  9999999877 9999999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         156 LLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       156 l~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      |+.|...|.|.+..++..+|.+.+|+|++.
T Consensus       210 li~~~Vlf~g~d~idQ~~ki~~~lgtpd~~  239 (369)
T KOG0665|consen  210 LILGTVLFPGKDHIDQWNKIIEQLGTPDPS  239 (369)
T ss_pred             HhhceEEecCchHHHHHHHHHHHhcCCCHH
Confidence            999999999999999999999999999874

>cd06639 STKc_myosinIIIB Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIB myosin

Probab=99.90  E-value=1.2e-22  Score=158.63  Aligned_cols=142  Identities=21%  Similarity=0.322  Sum_probs=109.6

Q ss_pred             hhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQI   94 (188)
Q Consensus        28 ~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~qi   94 (188)
                      .+.+.+|+.+++++ +|||+++++++|.+.   ........++++||+.++++..+.            ..+..++ .|+
T Consensus        62 ~~~~~~e~~~l~~l~~h~ni~~~~~~~~~~---~~~~~~~~~lv~ey~~~~sL~~~~~~~~~~~~~~~~~~~~~~~-~qi  137 (291)
T cd06639          62 DEEIEAEYNILQSLPNHPNVVKFYGMFYKA---DKLVGGQLWLVLELCNGGSVTELVKGLLICGQRLDEAMISYIL-YGA  137 (291)
T ss_pred             HHHHHHHHHHHHHhcCCCCeEEEEEEEEec---cccCCCeeEEEEEECCCCcHHHHHHHhhhcCCCCCHHHHHHHH-HHH
Confidence            45678899999998 799999999986331   122345689999999999987642            3345566 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccC----CCCchhH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGAR----MYGVGID  145 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~----~~~~~~D  145 (188)
                      +.||.|||+.+       |+|+       +|++|||++.           ..++..|  +|||.+....    .++.++|
T Consensus       138 ~~al~~lH~~~ivH~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~~~~D  215 (291)
T cd06639         138 LLGLQHLHNNRIIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFW--MAPEVIACEQQYDYSYDARCD  215 (291)
T ss_pred             HHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEeecccchhcccccccccCccCCccc--cChhhhcCCCCcccccCCccc
Confidence            99999999988       5555       6999999754           2356678  9999875432    2678999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         146 MWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       146 iwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      +||+||++|++++|++||...++...+..+
T Consensus       216 i~slGvi~~el~~g~~p~~~~~~~~~~~~~  245 (291)
T cd06639         216 VWSLGITAIELGDGDPPLFDMHPVKTLFKI  245 (291)
T ss_pred             hHHHHHHHHHHhhCCCCCCCCcHHHHHHHH
Confidence            999999999999999999877665554444

Serine/threonine kinases (STKs), class IIIB myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. They may also function as cargo carriers during light-dependent translocation, in photoreceptor cells, of proteins such as transducin and arrestin. Class IIIB myosin is expressed highly in retina. It is also pre

>cd06653 STKc_MEKK3_like_1 Catalytic domain of MAP/ERK kinase kinase 3-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.5e-22  Score=155.92  Aligned_cols=139  Identities=24%  Similarity=0.329  Sum_probs=110.2

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++|+||+++++++..      ..+...++++||++++++...        +..+..++ .|+++||
T Consensus        47 ~~~~~~~ei~~l~~l~h~~i~~~~~~~~~------~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~~i~~al  119 (264)
T cd06653          47 EVNALECEIQLLKNLRHDRIVQYYGCLRD------PEEKKLSIFVEYMPGGSIKDQLKAYGALTENVTRRYT-RQILQGV  119 (264)
T ss_pred             HHHHHHHHHHHHHHcCCCCcceEEEEEEc------CCCCEEEEEEEeCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHH
Confidence            44578899999999999999999997521      234567899999999988764        23455566 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc--------------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR--------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      .|||+.+       |+|+       ++++|||++.              ..++..|  +|||.+.+.. ++.++|+||+|
T Consensus       120 ~~LH~~~i~H~dl~p~ni~i~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG  196 (264)
T cd06653         120 SYLHSNMIVHRDIKGANILRDSAGNVKLGDFGASKRIQTICMSGTGIKSVTGTPYW--MSPEVISGEG-YGRKADVWSVA  196 (264)
T ss_pred             HHHHhCCEecCCCCHHHEEEcCCCCEEECccccccccccccccCccccccCCcccc--cCHhhhcCCC-CCccccHHHHH
Confidence            9999988       4444       6999999764              2356678  9999997755 88999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      |+++++++|++||.+........++
T Consensus       197 ~il~~l~~g~~p~~~~~~~~~~~~~  221 (264)
T cd06653         197 CTVVEMLTEKPPWAEYEAMAAIFKI  221 (264)
T ss_pred             HHHHHHHhCCCCCCccCHHHHHHHH
Confidence            9999999999999877665554444

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 3 (MEKK3)-like subfamily, catalytic (c) domain, functionally uncharacterized subgroup 1. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK3-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MEKK3-like subfamily is composed of MEKK3, MEKK2, and related proteins, all containing an N-terminal PB1 domain, which mediates oligomerization, and a C-terminal catalytic domain. MEKK2 and MEKK3 are mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks), proteins that phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phospho

>cd06657 STKc_PAK4 Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase 4

Probab=99.90  E-value=6.8e-23  Score=160.56  Aligned_cols=158  Identities=18%  Similarity=0.198  Sum_probs=119.9

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    +..++|.+..........+.+|+.+++.++|+||+++++.+        ..+...++++||++++++
T Consensus        33 ~g~v~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L  104 (292)
T cd06657          33 TGIVCIATVKSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY--------LVGDELWVVMEFLEGGAL  104 (292)
T ss_pred             CeEEEEEEEcCCCeEEEEEEecccchhHHHHHHHHHHHHHhcCCcchhheeeEE--------EeCCEEEEEEecCCCCcH
Confidence            577776 22    22223333222334556788999999999999999999975        446788999999999998


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       +..+..++ .|++.||+|||+.+       |+|+       ++++|||+..           ..++..| 
T Consensus       105 ~~~~~~~~~~~~~~~~~~-~ql~~~l~~lH~~givH~dl~p~Nilv~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~y-  182 (292)
T cd06657         105 TDIVTHTRMNEEQIAAVC-LAVLKALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW-  182 (292)
T ss_pred             HHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEcccccceecccccccccccccCccc-
Confidence            875       24455666 79999999999988       4444       6999999743           2456779 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                       +|||.+.+.. ++.++|+||+|+++|++++|.+||.+.+.......
T Consensus       183 -~~pE~~~~~~-~~~~~Dv~slGvil~el~tg~~p~~~~~~~~~~~~  227 (292)
T cd06657         183 -MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKM  227 (292)
T ss_pred             -cCHHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHH
Confidence             9999987655 88999999999999999999999987665444433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) 4, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK4 belongs to group II. Group II PAKs contain a PBD (p21-binding domain) and a C-terminal catalytic domain, but do not harbor an AID (autoinhibitory domain) or SH3 binding sites. PAK4 regulates cell mo

>cd06635 STKc_TAO1 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 1

Probab=99.90  E-value=2e-22  Score=159.49  Aligned_cols=140  Identities=23%  Similarity=0.296  Sum_probs=109.1

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|++++++++|||++++++++        .++...++++||+.+..+..+        ...+..++ .|++.||
T Consensus        68 ~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~g~l~~~~~~~~~~l~~~~~~~i~-~~i~~~l  138 (317)
T cd06635          68 KWQDIIKEVKFLQRIKHPNSIEYKGCY--------LREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAIT-HGALQGL  138 (317)
T ss_pred             HHHHHHHHHHHHHhCCCCCEEEEEEEE--------eeCCeEEEEEeCCCCCHHHHHHHhcCCCCHHHHHHHH-HHHHHHH
Confidence            345788999999999999999999976        445678999999986433322        23455566 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-------ccccccccCCCCccccc--cCCCCchhHHHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~e  155 (188)
                      .|||+.+       |+|+       +|++|||++.       ..++..|  +|||.+..  ...++.++|+||+||++|+
T Consensus       139 ~~lH~~~i~H~dL~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~~Dv~slGvil~e  216 (317)
T cd06635         139 AYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASIASPANSFVGTPYW--MAPEVILAMDEGQYDGKVDVWSLGITCIE  216 (317)
T ss_pred             HHHHHCCcccCCCCcccEEECCCCCEEEecCCCccccCCcccccCCccc--cChhhhhcCCCCCCCccccHHHHHHHHHH
Confidence            9999988       5665       5999999754       3467789  99999742  2347899999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHHHh
Q psy7174         156 LLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       156 l~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |++|.+||.+.+.......+..
T Consensus       217 l~~g~~p~~~~~~~~~~~~~~~  238 (317)
T cd06635         217 LAERKPPLFNMNAMSALYHIAQ  238 (317)
T ss_pred             HHhCCCCCCCccHHHHHHHHHh
Confidence            9999999987766555555543

Serine/threonine kinases (STKs), thousand-and-one amino acids 1 (TAO1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO1 is sometimes referred to as prostate-derived sterile 20-like kinase 2 (PSK2). TAO1 activates the p38 MAPK through direct interaction with and activation of MEK3. TAO1 is highly expressed in the brain and may play a role in neuron

>cd06638 STKc_myosinIIIA Catalytic domain of the Protein Serine/Threonine Kinase, Class IIIA myosin

Probab=99.90  E-value=1.3e-22  Score=157.80  Aligned_cols=138  Identities=20%  Similarity=0.320  Sum_probs=107.1

Q ss_pred             hhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQI   94 (188)
Q Consensus        28 ~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~qi   94 (188)
                      ...+.+|+.+++.+ +||||+++++++...   ....+...++++||+.+++|..+.            ..+..++ .|+
T Consensus        58 ~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~---~~~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~-~~i  133 (286)
T cd06638          58 DEEIEAEYNILKALSDHPNVVKFYGMYYKK---DVKNGDQLWLVLELCNGGSVTDLVKGFLKRGERMEEPIIAYIL-HEA  133 (286)
T ss_pred             HHHHHHHHHHHHHHhcCCCeeeeeeeeeec---ccCCCCeEEEEEeecCCCCHHHHHHHhhccCccccHHHHHHHH-HHH
Confidence            35678899999999 699999999976321   123456789999999999987642            2345566 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCcccccc----CCCCchhH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGA----RMYGVGID  145 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~----~~~~~~~D  145 (188)
                      ++||.|||+.+       |+|+       +|++|||++.           ..|+..|  +|||.+...    ..++.++|
T Consensus       134 ~~~l~~lH~~~i~H~dlkp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~~~~D  211 (286)
T cd06638         134 LMGLQHLHVNKTIHRDVKGNNILLTTEGGVKLVDFGVSAQLTSTRLRRNTSVGTPFW--MAPEVIACEQQLDSTYDARCD  211 (286)
T ss_pred             HHHHHHHHhCCccccCCCHHhEEECCCCCEEEccCCceeecccCCCccccccCCCcc--cChhhhchhhhccccccchhh
Confidence            99999999987       5555       6999999753           2366789  999987531    23788999


Q ss_pred             HHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         146 MWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       146 iwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                      +||+||++|++++|+.||...+....
T Consensus       212 v~slGvi~~el~~g~~p~~~~~~~~~  237 (286)
T cd06638         212 VWSLGITAIELGDGDPPLADLHPMRA  237 (286)
T ss_pred             hhhHHHHHHHHhcCCCCCCCCchhHH
Confidence            99999999999999999976654433

Serine/threonine kinases (STKs), class IIIA myosin subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins containing an N-terminal kinase catalytic domain and a C-terminal actin-binding domain. Class III myosins may play an important role in maintaining the structural integrity of photoreceptor cell microvilli. In photoreceptor cells, they may also function as cargo carriers during light-dependent translocation of proteins such as transducin and arrestin. Class IIIA myosin is highly expressed in retina and in inner ear

>cd06620 PKc_MAPKK_Byr1_like Catalytic domain of fungal Byr1-like dual-specificity MAP kinase kinases

Probab=99.90  E-value=1.3e-22  Score=157.88  Aligned_cols=131  Identities=22%  Similarity=0.282  Sum_probs=107.2

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|+++++.++||||+++++.+        ......++++||++++++..+.        ..+..+. .|++.|
T Consensus        45 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~  115 (284)
T cd06620          45 SVRKQILRELQIMHECRSPYIVSFYGAF--------LNENNICMCMEFMDCGSLDRIYKKGGPIPVEILGKIA-VAVVEG  115 (284)
T ss_pred             hHHHHHHHHHHHHHHcCCCCcceEeeeE--------ecCCEEEEEEecCCCCCHHHHHHhccCCCHHHHHHHH-HHHHHH
Confidence            4456788999999999999999999975        4457889999999999997652        3455566 799999


Q ss_pred             HHHHhhc-C-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSS-M-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~-~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      |.|||+. +       |+|+       ++++|||++.         ..++..|  +|||++.+.. ++.++|+||+||++
T Consensus       116 l~~LH~~~~i~H~dl~p~nil~~~~~~~~l~d~gl~~~~~~~~~~~~~~~~~~--~aPE~~~~~~-~~~~~Di~slG~~l  192 (284)
T cd06620         116 LTYLYNVHRIMHRDIKPSNILVNSRGQIKLCDFGVSGELINSIADTFVGTSTY--MSPERIQGGK-YTVKSDVWSLGISI  192 (284)
T ss_pred             HHHHHHhcCeeccCCCHHHEEECCCCcEEEccCCcccchhhhccCccccCccc--CCHHHHccCC-CCccchHHHHHHHH
Confidence            9999974 4       4444       6999999754         3467789  9999987654 88999999999999


Q ss_pred             HHHHhCCCCCCCCCh
Q psy7174         154 CELLLKAPFLPGESD  168 (188)
Q Consensus       154 ~el~~g~~pf~~~~~  168 (188)
                      |++++|..||...+.
T Consensus       193 ~~l~tg~~p~~~~~~  207 (284)
T cd06620         193 IELALGKFPFAFSNI  207 (284)
T ss_pred             HHHHhCCCCCcccch
Confidence            999999999976443

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, fungal Byr1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include

>cd07830 STKc_MAK_like Catalytic domain of Male germ cell-Associated Kinase-like Serine/Threonine Kinases

Probab=99.90  E-value=6.2e-23  Score=159.29  Aligned_cols=146  Identities=33%  Similarity=0.575  Sum_probs=117.5

Q ss_pred             HHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQILEGL   98 (188)
Q Consensus        30 ~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~qi~~gl   98 (188)
                      ...+|+..+++++ ||||+++++++        .++...++++||+ ++++...          ...+..++ .|++.||
T Consensus        43 ~~~~e~~~l~~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~-~~~l~~~~~~~~~~~~~~~~~~~~~-~~l~~~l  112 (283)
T cd07830          43 MNLREVKSLRKLNEHPNIVKLKEVF--------RENDELYFVFEYM-EGNLYQLMKDRKGKPFSESVIRSII-YQILQGL  112 (283)
T ss_pred             HHHHHHHHHHhccCCCCchhHHHHh--------hcCCcEEEEEecC-CCCHHHHHHhcccccCCHHHHHHHH-HHHHHHH
Confidence            4467999999999 99999999975        4467889999999 6666543          12344555 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      .|||+++       |.|+       ++++|||++.          ..++..|  +|||.+.....++.++|+||+|++++
T Consensus       113 ~~Lh~~~i~H~dl~~~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~~~~~~~Di~s~G~~l~  190 (283)
T cd07830         113 AHIHKHGFFHRDLKPENLLVSGPEVVKIADFGLAREIRSRPPYTDYVSTRWY--RAPEILLRSTSYSSPVDIWALGCIMA  190 (283)
T ss_pred             HHHHHCCcccCCCChhhEEEcCCCCEEEeecccceeccCCCCcCCCCCcccc--cCceeeecCcCcCCccchhhHHHHHH
Confidence            9999998       5555       6999999754          2356678  99998865445789999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         155 ELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       155 el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      ++++|++||.+.+..+....+...++.|....|
T Consensus       191 el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  223 (283)
T cd07830         191 ELYTLRPLFPGSSEIDQLYKICSVLGTPTKQDW  223 (283)
T ss_pred             HHHhCCCccCCCChHHHHHHHHHhcCCCChhhh
Confidence            999999999998888888888887777766554

Serine/Threonine Kinases (STKs), Male germ cell-Associated Kinase (MAK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of human MAK and MAK-related kinase (MRK), Saccharomyces cerevisiae Ime2p, Schizosaccharomyces pombe Mei4-dependent protein 3 (Mde3) and Pit1, Caenorhabditis elegans dyf-5, Arabidopsis thaliana MHK, and similar proteins. These proteins play important roles during meiosis. MAK is highly expressed in testicular cells specifically in the meiotic phase, but is not essential for spermatogenesis and fertili

>KOG0986|consensus

Probab=99.90  E-value=1.3e-23  Score=167.37  Aligned_cols=131  Identities=18%  Similarity=0.270  Sum_probs=113.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQIL   95 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~qi~   95 (188)
                      +..+-+++|..||++++.+.||.+--+|        ...+.+|+|+..|.||+|.-.          ++...++. ++|+
T Consensus       227 ~ge~maLnEk~iL~kV~s~FiVslaYAf--------eTkd~LClVLtlMNGGDLkfHiyn~g~~gF~e~ra~FYA-AEi~  297 (591)
T KOG0986|consen  227 KGETMALNEKQILEKVSSPFIVSLAYAF--------ETKDALCLVLTLMNGGDLKFHIYNHGNPGFDEQRARFYA-AEII  297 (591)
T ss_pred             hhhHHhhHHHHHHHHhccCcEEEEeeee--------cCCCceEEEEEeecCCceeEEeeccCCCCCchHHHHHHH-HHHH
Confidence            3445678999999999999999996543        557789999999999998652          56677777 8999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      -||++||+.+       |+||       ++|+|+|++.          .+||..|  ||||++.+.. |+..+|+||+||
T Consensus       298 cGLehlH~~~iVYRDLKPeNILLDd~GhvRISDLGLAvei~~g~~~~~rvGT~GY--MAPEvl~ne~-Y~~s~Dwf~lGC  374 (591)
T KOG0986|consen  298 CGLEHLHRRRIVYRDLKPENILLDDHGHVRISDLGLAVEIPEGKPIRGRVGTVGY--MAPEVLQNEV-YDFSPDWFSLGC  374 (591)
T ss_pred             hhHHHHHhcceeeccCChhheeeccCCCeEeeccceEEecCCCCccccccCcccc--cCHHHHcCCc-ccCCccHHHHHh
Confidence            9999999998       8888       4999999843          5899999  9999999977 999999999999


Q ss_pred             HHHHHHhCCCCCCCCCh
Q psy7174         152 IICELLLKAPFLPGESD  168 (188)
Q Consensus       152 il~el~~g~~pf~~~~~  168 (188)
                      ++|||+.|+.||.....
T Consensus       375 llYemi~G~sPFr~~Ke  391 (591)
T KOG0986|consen  375 LLYEMIAGHSPFRQRKE  391 (591)
T ss_pred             HHHHHHcccCchhhhhh
Confidence            99999999999976543

>cd05611 STKc_Rim15_like Catalytic domain of fungal Rim15-like Protein Serine/Threonine Kinases

Probab=99.90  E-value=1.9e-22  Score=154.87  Aligned_cols=161  Identities=20%  Similarity=0.259  Sum_probs=119.5

Q ss_pred             cccccc-c----CCccccccccccc---hhhhhHHHHHHHHH-HhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD---VNVETQAKAEGKQD-RRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~---~~~~~~~~~E~~il-~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      +|.||. .    ++..++|.+.+..   .........|..++ ...+|+|++++++++        ..+...++++||+.
T Consensus         9 ~~~v~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~   80 (260)
T cd05611           9 FGSVYLAKKRSTGDYFAIKVLKKSDMIAKNQVTNVKAERAIMMIQGESPYVAKLYYSF--------QSKDYLYLVMEYLN   80 (260)
T ss_pred             CeeEEEEEecCCCCeEEEEEecchhhhHHHHHHHHHHHHHHHhhcCCCCCeeeeeeeE--------EcCCeEEEEEeccC
Confidence            677877 2    2233345444321   12223345565544 455899999999975        44568899999999


Q ss_pred             cccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------ccccccc
Q psy7174          76 KTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYC  126 (188)
Q Consensus        76 ~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y  126 (188)
                      +++|..+.        ..+..++ .|++.||.|||+.+       |.|+       +|++|||++.       ..++..|
T Consensus        81 ~~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y  159 (260)
T cd05611          81 GGDCASLIKTLGGLPEDWAKQYI-AEVVLGVEDLHQRGIIHRDIKPENLLIDQTGHLKLTDFGLSRNGLENKKFVGTPDY  159 (260)
T ss_pred             CCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHeEECCCCcEEEeecccceeccccccCCCCcCc
Confidence            99998763        4466677 89999999999988       4554       6999999764       3467789


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        +|||.+.+.. ++.++|+||+|+++|++++|.+||.+.+.......+..
T Consensus       160 --~~pe~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  207 (260)
T cd05611         160 --LAPETILGVG-DDKMSDWWSLGCVIFEFLFGYPPFHAETPDAVFDNILS  207 (260)
T ss_pred             --cChhhhcCCC-CcchhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence              9999987765 89999999999999999999999988777666555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, fungal Rim15-like kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include Saccharomyces cerevisiae Rim15, Schizosaccharomyces pombe cek1, and similar fungal proteins. They contain a central catalytic domain, which contains an insert relative to MAST kinases. In addition, Rim15 contains a C-terminal signal receiver (REC) domain while cek1 contains an N-terminal PAS domain. Rim15 (or Rim15p) functions as a regulator of meiosis. It acts as a do

>cd06605 PKc_MAPKK Catalytic domain of the dual-specificity Protein Kinase, Mitogen-Activated Protein Kinase Kinase

Probab=99.90  E-value=1.1e-22  Score=156.42  Aligned_cols=150  Identities=19%  Similarity=0.206  Sum_probs=115.8

Q ss_pred             cccccc-cC----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      +|.||+ ..    +..++|.+.+. .....+++.+|++++++++||||+++++++        ..+...++++|++.+++
T Consensus        14 ~~~v~~~~~~~~~~~~~ik~~~~~~~~~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   85 (265)
T cd06605          14 SGVVSKVLHRPTGKIMAVKTIRLEINEAIQKQILRELDILHKCNSPYIVGFYGAF--------YNNGDISICMEYMDGGS   85 (265)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecccChHHHHHHHHHHHHHHHCCCCchhhhheee--------ecCCEEEEEEEecCCCc
Confidence            567776 22    22233333332 234556789999999999999999999975        44578899999999999


Q ss_pred             HHHHH---------HHHHHHHHHHHHHHHHHHhh-cC-------CCCe-------EEEecCCccc---------cccccc
Q psy7174          79 KARFY---------SHLRYLENQQILEGLQALKS-SM-------PALL-------KKFVGIGIGR---------HVCTLY  125 (188)
Q Consensus        79 l~~~~---------~~~~~~~~~qi~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~---------~~~~~~  125 (188)
                      |..+.         ..+..++ .|+++||+|||+ .+       |+|+       +|++|||.+.         ..++..
T Consensus        86 L~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lH~~~~i~H~dl~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~  164 (265)
T cd06605          86 LDKILKEVQGRIPERILGKIA-VAVLKGLTYLHEKHKIIHRDVKPSNILVNSRGQIKLCDFGVSGQLVNSLAKTFVGTSS  164 (265)
T ss_pred             HHHHHHHccCCCCHHHHHHHH-HHHHHHHHHHcCCCCeecCCCCHHHEEECCCCCEEEeecccchhhHHHHhhcccCChh
Confidence            88763         2345566 799999999999 66       3343       6999999754         346678


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      |  +|||.+.+.. ++.++|+||+|++++++++|..||...
T Consensus       165 y--~~PE~~~~~~-~~~~~Dv~slG~~l~~l~~g~~p~~~~  202 (265)
T cd06605         165 Y--MAPERIQGND-YSVKSDIWSLGLSLIELATGRFPYPPE  202 (265)
T ss_pred             c--cCHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCcc
Confidence            8  9999987754 899999999999999999999999654

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK or MAP2K), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK or MAP3K). MAPKKs are dual-specificity

>cd06623 PKc_MAPKK_plant_like Catalytic domain of Plant dual-specificity MAP kinase kinases and similar proteins

Probab=99.90  E-value=2.4e-22  Score=154.14  Aligned_cols=130  Identities=24%  Similarity=0.323  Sum_probs=108.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|++++++++|+||+++++++        ..+...++++||+.++++..+.        ..+..++ .|+++|
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~~l~~~  111 (264)
T cd06623          41 EFRKQLLRELKTLRSCESPYVVKCYGAF--------YKEGEISIVLEYMDGGSLADLLKKVGKIPEPVLAYIA-RQILKG  111 (264)
T ss_pred             HHHHHHHHHHHHHHhcCCCCeeeEEEEE--------ccCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHH
Confidence            4467889999999999999999999975        4457889999999999998763        3355566 799999


Q ss_pred             HHHHhh-cC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          98 LQALKS-SM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        98 l~~lH~-~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      +.|||+ .+       |+|+       ++++|||+..           ..++..|  +|||.+.... ++.++|+||||+
T Consensus       112 l~~lh~~~~~~H~~l~~~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~y--~~pE~~~~~~-~~~~~Dv~slG~  188 (264)
T cd06623         112 LDYLHTKRHIIHRDIKPSNLLINSKGEVKIADFGISKVLENTLDQCNTFVGTVTY--MSPERIQGES-YSYAADIWSLGL  188 (264)
T ss_pred             HHHHhccCCCccCCCCHHHEEECCCCCEEEccCccceecccCCCcccceeecccc--cCHhhhCCCC-CCchhhHHHHHH
Confidence            999999 77       4444       6999999754           2356678  9999987754 889999999999


Q ss_pred             HHHHHHhCCCCCCCCC
Q psy7174         152 IICELLLKAPFLPGES  167 (188)
Q Consensus       152 il~el~~g~~pf~~~~  167 (188)
                      ++|++++|+.||...+
T Consensus       189 il~~l~tg~~p~~~~~  204 (264)
T cd06623         189 TLLECALGKFPFLPPG  204 (264)
T ss_pred             HHHHHHhCCCCCcccc
Confidence            9999999999997763

Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, Plant MAPKKs and similar proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of

>smart00219 TyrKc Tyrosine kinase, catalytic domain

Probab=99.90  E-value=3.4e-22  Score=152.70  Aligned_cols=140  Identities=22%  Similarity=0.311  Sum_probs=111.9

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQILE   96 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~~   96 (188)
                      ..+.+.+|+++++.++|+||+++++++        .++...++++|+++++++..+.          ..+..++ .|++.
T Consensus        44 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~i~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~-~ql~~  114 (258)
T smart00219       44 QIEEFLREARIMRKLDHPNIVKLLGVC--------TEEEPLMIVMEYMEGGDLLDYLRKNRPKELSLSDLLSFA-LQIAR  114 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCchheEEEEE--------cCCCeeEEEEeccCCCCHHHHHHhhhhccCCHHHHHHHH-HHHHH
Confidence            567889999999999999999999976        3446789999999999987653          2234555 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccccc------------ccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRHV------------CTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ||.+||+.+       |+|+       ++++|||+....            ++..|  +|||.+.... ++.++|+||+|
T Consensus       115 ~l~~lh~~~~~h~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~~Pe~~~~~~-~~~~~Di~slG  191 (258)
T smart00219      115 GMEYLESKNFIHRDLAARNCLVGENLVVKISDFGLSRDLYDDDYYKKKGGKLPIRW--MAPESLKDGK-FTSKSDVWSFG  191 (258)
T ss_pred             HHHHHhcCCeeecccccceEEEccCCeEEEcccCCceecccccccccccCCCcccc--cChHHhccCC-CCcchhHHHHH
Confidence            999999998       5565       699999986422            34578  9999986544 89999999999


Q ss_pred             HHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         151 CIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       151 ~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ++++++++ |.+||.+.+.......+...
T Consensus       192 ~i~~~l~~~g~~p~~~~~~~~~~~~~~~~  220 (258)
T smart00219      192 VLLWEIFTLGESPYPGMSNEEVLEYLKKG  220 (258)
T ss_pred             HHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence            99999998 88999876665555555443

Phosphotransferases. Tyrosine-specific kinase subfamily.

>KOG1035|consensus

Probab=99.90  E-value=5e-23  Score=179.04  Aligned_cols=151  Identities=25%  Similarity=0.291  Sum_probs=117.0

Q ss_pred             cccccc-cCCccc-ccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCC------------------
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPT------------------   60 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~------------------   60 (188)
                      ||.|++ .||... -.||||+    +.+....+.+|+++|++|+|||||+|+..++|.....                  
T Consensus       492 FG~VvkVRNKlDGr~YAIKKIpl~~s~~~~skI~rEVk~LArLnHpNVVRYysAWVEs~~~~~~~ei~~~~~~~~sQs~s  571 (1351)
T KOG1035|consen  492 FGSVVKVRNKLDGREYAIKKIPLKASDKLYSKILREVKLLARLNHPNVVRYYSAWVESTAELTVLEIVASDSESRSQSAS  571 (1351)
T ss_pred             CceEEEEeecccchhhhhhhccCchHHHHHHHHHHHHHHHhhcCCcceeeeehhhhccCCccccccccccchhhhcccCC
Confidence            899999 778776 7788885    3445567899999999999999999998776643100                  


Q ss_pred             -------------------------------CC--------------------------------C--------------
Q psy7174          61 -------------------------------TL--------------------------------S--------------   63 (188)
Q Consensus        61 -------------------------------~~--------------------------------~--------------   63 (188)
                                                     ..                                +              
T Consensus       572 ~~~~~~~~~q~t~~p~~~~~~~~~~~~dd~sss~~~~~~~~~~~~d~e~~d~dedg~~~S~tS~~e~~~~~d~~~ess~s  651 (1351)
T KOG1035|consen  572 KYNGVDIRYQPTSSPSLTLSELDSEDEDDKSSSYTTRKASYESSTDEENDDSDEDGRNLSNTSDSEGSVILDDTSESSES  651 (1351)
T ss_pred             CcccceeeeccCCCcccCcchhhccccCccccccccccccccccCCcccccccccccccccccccCCccccCcchhhhhh
Confidence                                           00                                0              


Q ss_pred             --------C--------CccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--
Q psy7174          64 --------T--------SSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL--  109 (188)
Q Consensus        64 --------~--------~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--  109 (188)
                              +        ..+||=||||...+++.+.         +....++ +||++||.|+|+++       |.||  
T Consensus       652 ~~~~~n~~e~~~~~q~~~~LYIQMEyCE~~ll~~iI~~N~~~~~~d~~wrLF-reIlEGLaYIH~~giIHRDLKP~NIFL  730 (1351)
T KOG1035|consen  652 IPKTENSSEPMVPVQKPLILYIQMEYCEKTLLRDIIRRNHFNSQRDEAWRLF-REILEGLAYIHDQGIIHRDLKPRNIFL  730 (1351)
T ss_pred             ccccCCccccccccccceEEEEEHhhhhhhHHHHHHHhcccchhhHHHHHHH-HHHHHHHHHHHhCceeeccCCcceeEE
Confidence                    0        1127778888888877752         2334455 89999999999999       7888  


Q ss_pred             -----EEEecCCcc-----------------------------cccccccccCCCCccccccC--CCCchhHHHHHHHHH
Q psy7174         110 -----KKFVGIGIG-----------------------------RHVCTLYCTRGAPELLFGAR--MYGVGIDMWAVGCII  153 (188)
Q Consensus       110 -----lkl~dfg~~-----------------------------~~~~~~~y~~~aPe~~~~~~--~~~~~~DiwslG~il  153 (188)
                           +||.|||++                             +.+||..|  +|||++.+..  .|+.|+||||||+++
T Consensus       731 d~~~~VKIGDFGLAt~~~~~~~~~d~~~~~~~~~~g~~~~~~Ts~VGTalY--vAPEll~~~~~~~Yn~KiDmYSLGIVl  808 (1351)
T KOG1035|consen  731 DSRNSVKIGDFGLATDLKENLESIDQDLSFSTNRAGSNDGDLTSQVGTALY--VAPELLSDTSSNKYNSKIDMYSLGIVL  808 (1351)
T ss_pred             cCCCCeeecccccchhhhhhhhhHhhccCccccccCCCCcccccccceeee--ecHHHhcccccccccchhhhHHHHHHH
Confidence                 799999962                             26789999  9999997755  599999999999999


Q ss_pred             HHHHh
Q psy7174         154 CELLL  158 (188)
Q Consensus       154 ~el~~  158 (188)
                      +||+.
T Consensus       809 FEM~y  813 (1351)
T KOG1035|consen  809 FEMLY  813 (1351)
T ss_pred             HHHhc
Confidence            99964

>cd06614 STKc_PAK Catalytic domain of the Protein Serine/Threonine Kinase, p21-activated kinase

Probab=99.90  E-value=2.1e-22  Score=156.91  Aligned_cols=137  Identities=23%  Similarity=0.329  Sum_probs=111.0

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------HHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------HLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------~~~~~~~~qi~~g   97 (188)
                      ..+.+.+|++++++++|+|++++++++        ..+...++++||+.+++|..+..         .+..++ .|++.|
T Consensus        58 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~l~~~~~~~i~-~~i~~~  128 (286)
T cd06614          58 NKELIINEILIMKDCKHPNIVDYYDSY--------LVGDELWVVMEYMDGGSLTDIITQNFVRMNEPQIAYVC-REVLQG  128 (286)
T ss_pred             hHHHHHHHHHHHHHCCCCCeeEEEEEE--------EECCEEEEEEeccCCCcHHHHHHHhccCCCHHHHHHHH-HHHHHH
Confidence            466788999999999999999999976        34578899999999999987632         344455 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      |.|||+.+       |.|+       +|++|||+..           ..++..|  ++||.+.+.. ++.++|+||+|++
T Consensus       129 L~~lH~~gi~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~~Dv~slGvi  205 (286)
T cd06614         129 LEYLHSQNVIHRDIKSDNILLSKDGSVKLADFGFAAQLTKEKSKRNSVVGTPYW--MAPEVIKRKD-YGPKVDIWSLGIM  205 (286)
T ss_pred             HHHHHhCCeeeCCCChhhEEEcCCCCEEECccchhhhhccchhhhccccCCccc--CCHhHhcCCC-CCCccccHHHHHH
Confidence            99999988       5555       6999999643           2356678  9999987755 8999999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHH
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      +|++++|+.||...++......+
T Consensus       206 l~~l~~g~~p~~~~~~~~~~~~~  228 (286)
T cd06614         206 CIEMAEGEPPYLREPPLRALFLI  228 (286)
T ss_pred             HHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999876655444433

Serine/threonine kinases (STKs), p21-activated kinase (PAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs are implicated in the regulation of many cellular processes including growth factor receptor-mediated proliferation, cell polarity, cell motility, cell death and survival, and actin cytoskeleton organization. PAK deregulation is associated with tumor development. PAKs from higher eukaryotes are classified into two grou

>cd05038 PTKc_Jak_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.90  E-value=8.7e-23  Score=158.34  Aligned_cols=129  Identities=19%  Similarity=0.292  Sum_probs=104.6

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~g   97 (188)
                      ..+.+.+|+++++.++||||+++++++.      ...+...++++||+.++++..+.         ..+..++ .|++.|
T Consensus        49 ~~~~~~~ei~~l~~l~~~~i~~~~~~~~------~~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~-~~l~~a  121 (284)
T cd05038          49 HRSDFEREIEILRTLDHENIVKYKGVCE------KPGGRSLRLIMEYLPSGSLRDYLQRHRDQINLKRLLLFS-SQICKG  121 (284)
T ss_pred             HHHHHHHHHHHHHhCCCCChheEEeeee------cCCCCceEEEEecCCCCCHHHHHHhCccccCHHHHHHHH-HHHHHH
Confidence            4678999999999999999999999752      23356789999999999988763         2345566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccccc--------------cccccCCCCccccccCCCCchhHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRHVC--------------TLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~~~--------------~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      |.|||+.+       |.|+       +|++|||.+....              +..|  .+||.+.+.. ++.++|+||+
T Consensus       122 L~~lH~~~i~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~~--~~Pe~~~~~~-~~~~~Di~sl  198 (284)
T cd05038         122 MDYLGSQRYIHRDLAARNILVESEDLVKISDFGLAKVLPEDKDYYYVKEPGESPIFW--YAPECLRTSK-FSSASDVWSF  198 (284)
T ss_pred             HHHHHhCCeecCCCCHHhEEEcCCCCEEEcccccccccccCCcceeccCCCCCcccc--cCcHHHccCC-CCcccchHHH
Confidence            99999988       5555       6999999865332              2347  8999987655 8899999999


Q ss_pred             HHHHHHHHhCCCCCCC
Q psy7174         150 GCIICELLLKAPFLPG  165 (188)
Q Consensus       150 G~il~el~~g~~pf~~  165 (188)
                      |+++++|++|..|+..
T Consensus       199 G~~l~el~tg~~p~~~  214 (284)
T cd05038         199 GVTLYELFTYGDPSQS  214 (284)
T ss_pred             hhhhheeeccCCCccc
Confidence            9999999999988754

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; catalytic (c) domain (repeat 2). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase catalytic domain. Most Jaks are expressed in a wide variety of tissues, except for Jak3, which is expressed only in hematopoietic cells. Jaks are crucial for cytokine receptor signaling. They are activated by aut

>cd05051 PTKc_DDR Catalytic domain of the Protein Tyrosine Kinases, Discoidin Domain Receptors

Probab=99.90  E-value=2.9e-22  Score=156.62  Aligned_cols=139  Identities=21%  Similarity=0.245  Sum_probs=111.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------------------HHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------------------SHL   86 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------------------~~~   86 (188)
                      ...+++.+|++++++++||||+++++++        ..+...++++|++.++++..+.                   ..+
T Consensus        61 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~  132 (296)
T cd05051          61 NAREDFLKEVKILSRLSDPNIARLLGVC--------TVDPPLCMIMEYMENGDLNQFLQKHVAETSGLACNSKSLSFSTL  132 (296)
T ss_pred             HHHHHHHHHHHHHHhcCCCCEeEEEEEE--------ecCCCcEEEEecCCCCCHHHHHHhcccccccccccCCCCCHHHH
Confidence            4567788999999999999999999976        3456889999999999987753                   234


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCC
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~  139 (188)
                      ..++ .|++.||.|||+++       |+|+       ++++|||++..             .++..|  +|||.+.... 
T Consensus       133 ~~~~-~~i~~al~~LH~~~i~H~dlkp~Nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-  208 (296)
T cd05051         133 LYMA-TQIASGMRYLESLNFVHRDLATRNCLVGKNYTIKIADFGMSRNLYSSDYYRVQGRAPLPIRW--MAWESVLLGK-  208 (296)
T ss_pred             HHHH-HHHHHHHHHHHHcCccccccchhceeecCCCceEEccccceeecccCcceeecCcCCCCcee--cCHHHhhcCC-
Confidence            5566 79999999999988       6666       58999998652             224468  9999987755 


Q ss_pred             CCchhHHHHHHHHHHHHHh--CCCCCCCCChHHHHHHHH
Q psy7174         140 YGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~--g~~pf~~~~~~~~~~~i~  176 (188)
                      ++.++||||+||++|++++  +..||...+..+.+..+.
T Consensus       209 ~~~~~Dv~slG~~l~el~~~~~~~p~~~~~~~~~~~~~~  247 (296)
T cd05051         209 FTTKSDVWAFGVTLWEILTLCREQPYEHLTDQQVIENAG  247 (296)
T ss_pred             CCccchhhhhHHHHHHHHhcCCCCCCCCcChHHHHHHHH
Confidence            8999999999999999997  678887766555544443

Protein Tyrosine Kinase (PTK) family; Discoidin Domain Receptor (DDR) subfamily; catalytic (c) domain. The DDR subfamily consists of homologs of mammalian DDR1, DDR2, and similar proteins. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. DDR subfamily members are receptor tyr kinases (RTKs) containing an extracellular discoidin homology domain, a transmembrane segment, an extended juxtamembrane region, and an intracellular catalytic domain. The binding of the ligand, collagen, to DDRs results in a slow but sustained receptor activation. DDRs regulate cell adhesion, proliferation, and extracellular matrix remodeling. They have been linke

>cd06632 STKc_MEKK1_plant Catalytic domain of the Protein Serine/Threonine Kinase, Plant MAP/ERK kinase kinase 1

Probab=99.90  E-value=2.3e-22  Score=153.75  Aligned_cols=138  Identities=25%  Similarity=0.399  Sum_probs=110.1

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|+++++.++|+||+++++++        .++...++++||++++++..+.        ..+..++ .|+++||
T Consensus        45 ~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~i~~~l  115 (258)
T cd06632          45 AVKQLEQEIALLSKLQHPNIVQYLGTE--------REEDNLYIFLELVPGGSLAKLLKKYGSFPEPVIRLYT-RQILLGL  115 (258)
T ss_pred             HHHHHHHHHHHHHhcCCCCchheeeeE--------ecCCeEEEEEEecCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHH
Confidence            456788999999999999999999975        4556889999999999987752        3344556 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      .|||+.+       |+|+       +|++|||+..          ..++..|  ++||.+.....++.++|+||+|+++|
T Consensus       116 ~~lH~~~i~H~dl~~~ni~~~~~~~~kl~d~~~~~~~~~~~~~~~~~~~~~y--~~pe~~~~~~~~~~~~D~~slG~~l~  193 (258)
T cd06632         116 EYLHDRNTVHRDIKGANILVDTNGVVKLADFGMAKQVVEFSFAKSFKGSPYW--MAPEVIAQQGGYGLAADIWSLGCTVL  193 (258)
T ss_pred             HHHHHCCcccCCCCHHHEEECCCCCEEEccCccceeccccccccccCCCcce--eCHHHhcCCCCCCchhhhHHHHHHHH
Confidence            9999988       4455       6999999754          3356778  99999865333789999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHH
Q psy7174         155 ELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       155 el~~g~~pf~~~~~~~~~~~i  175 (188)
                      ++++|++||...........+
T Consensus       194 ~l~~g~~pf~~~~~~~~~~~~  214 (258)
T cd06632         194 EMATGKPPWSQLEGVAAVFKI  214 (258)
T ss_pred             HHHhCCCCcccCcHHHHHHHH
Confidence            999999999766554444443

Serine/threonine kinases (STKs), plant MAP/ERK kinase kinase 1 (MEKK1)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The plant MEKK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of plant mitogen-activated protein kinase (MAPK) kinase kinases (MAPKKKs or MKKKs or MAP3Ks) including Arabidopsis thaliana MEKK1 and MAPKKK3. MEKK1 is a MAPKKK that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Arabidops

>cd07829 STKc_CDK_like Catalytic domain of Cyclin-Dependent protein Kinase-like Serine/Threonine Kinases

Probab=99.89  E-value=7.9e-23  Score=158.43  Aligned_cols=151  Identities=33%  Similarity=0.667  Sum_probs=121.8

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|++++++++|+||+++++++        .+....++++|++.+ ++..+.         ..+..++ .|++.
T Consensus        40 ~~~~~~~~e~~~l~~~~~~~i~~~~~~~--------~~~~~~~~v~e~~~~-~l~~~i~~~~~~~~~~~~~~~~-~~i~~  109 (282)
T cd07829          40 GIPSTALREISLLKELKHPNIVKLLDVI--------HTERKLYLVFEYCDM-DLKKYLDKRPGPLSPNLIKSIM-YQLLR  109 (282)
T ss_pred             cccHHHHHHHHHHHhcCCCCHHHHHhhh--------hcCCceEEEecCcCc-CHHHHHHhhccCCCHHHHHHHH-HHHHH
Confidence            3446678899999999999999999975        345788999999985 665542         3345566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCcccc-----------cccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRH-----------VCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                      ||.|||+.+       |+|+       +|++|||.+..           .++..|  +|||.+.....++.++|+||+||
T Consensus       110 ~l~~LH~~~i~H~~l~~~ni~~~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~--~aPE~~~~~~~~~~~~Dv~slG~  187 (282)
T cd07829         110 GLAYCHSHRILHRDLKPQNILINRDGVLKLADFGLARAFGIPLRTYTHEVVTLWY--RAPEILLGSKHYSTAVDIWSVGC  187 (282)
T ss_pred             HHHHHHHCCcccCCCChheEEEcCCCCEEEecCCcccccCCCccccCccccCcCc--CChHHhcCCcCCCccccHHHHHH
Confidence            999999998       5555       59999997542           234568  99999876534889999999999


Q ss_pred             HHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         152 IICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       152 il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +++++++|.+||.+.+..+.+.++.+.++.|.+..||
T Consensus       188 ~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  224 (282)
T cd07829         188 IFAEMITGKPLFPGDSEIDQLFKIFQILGTPTEESWP  224 (282)
T ss_pred             HHHHHHhCCCCCCCccHHHHHHHHHHHhCCCcHHHHH
Confidence            9999999999999999888888888888877776553

Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase (CDK)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDKs are partly regulated by their subcellular localization, which defines substrate phosphorylation and the resulting specific function. CDK1, CDK2, CDK4, and CDK6 have well-defined functions in the cell cycle, such as the regulation of the

>KOG0612|consensus

Probab=99.89  E-value=1e-23  Score=182.18  Aligned_cols=162  Identities=18%  Similarity=0.147  Sum_probs=130.3

Q ss_pred             cccccc-cCCc-ccccccccc------chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARC------DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~------~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.|+. ..+- ..|.|.|+.      ......-|..|-.+|...+.+=|++++-+|        ++++++|+||||++|
T Consensus        88 FGEV~lVr~k~t~~VYAMK~lnK~eMlKr~~tA~F~EERDimv~~ns~Wiv~LhyAF--------QD~~~LYlVMdY~pG  159 (1317)
T KOG0612|consen   88 FGEVALVRHKSTEKVYAMKILNKWEMLKRAETACFREERDIMVFGNSEWIVQLHYAF--------QDERYLYLVMDYMPG  159 (1317)
T ss_pred             cceeEEEEeeccccchhHHHhhHHHHhhchhHHHHHHHhHHHHcCCcHHHHHHHHHh--------cCccceEEEEecccC
Confidence            666665 2222 225555542      122334577899999999999999998754        889999999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc------------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI------------GRHVC  122 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~------------~~~~~  122 (188)
                      |++-.+        ++..+++. ..++.||+-+|+.|       |+|+       +|++|||.            +..+|
T Consensus       160 GDlltLlSk~~~~pE~~ArFY~-aEiVlAldslH~mgyVHRDiKPDNvLld~~GHikLADFGsClkm~~dG~V~s~~aVG  238 (1317)
T KOG0612|consen  160 GDLLTLLSKFDRLPEDWARFYT-AEIVLALDSLHSMGYVHRDIKPDNVLLDKSGHIKLADFGSCLKMDADGTVRSSVAVG  238 (1317)
T ss_pred             chHHHHHhhcCCChHHHHHHHH-HHHHHHHHHHHhccceeccCCcceeEecccCcEeeccchhHHhcCCCCcEEeccccC
Confidence            998764        45677788 79999999999999       8888       49999994            34789


Q ss_pred             cccccCCCCcccccc----CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||-|  .+||++...    ..|+..+|+||+||++|||+.|..||+.++-.+++.+|..
T Consensus       239 TPDY--ISPEvLqs~~~~~g~yG~ecDwWSlGV~~YEMlyG~TPFYadslveTY~KIm~  295 (1317)
T KOG0612|consen  239 TPDY--ISPEVLQSQGDGKGEYGRECDWWSLGVFMYEMLYGETPFYADSLVETYGKIMN  295 (1317)
T ss_pred             CCCc--cCHHHHHhhcCCccccCCccchhhhHHHHHHHHcCCCcchHHHHHHHHHHHhc
Confidence            9999  999998531    3489999999999999999999999999999999888853

>cd06608 STKc_myosinIII_like Catalytic domain of Class III myosin-like Protein Serine/Threonine Kinases

Probab=99.89  E-value=2.1e-22  Score=155.23  Aligned_cols=144  Identities=20%  Similarity=0.295  Sum_probs=109.1

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQ   92 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~   92 (188)
                      ...+.+.+|+++++++ +|+||++++++|.....  ...+...++++||+.++++..+.            ..+..++ .
T Consensus        44 ~~~~~~~~e~~~l~~~~~h~~i~~~~~~~~~~~~--~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~  120 (275)
T cd06608          44 DEEEEIKEEYNILRKYSNHPNIATFYGAFIKKNP--PGNDDQLWLVMELCGGGSVTDLVKGLRKKGKRLKEEWIAYIL-R  120 (275)
T ss_pred             hhHHHHHHHHHHHHHhcCCCChheEEEEEEecCC--CCcceEEEEEEEcCCCCcHHHHHHHHhhcCCCCCHHHHHHHH-H
Confidence            3456789999999999 69999999998743211  12355689999999999887652            2344566 7


Q ss_pred             HHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCcccccc----CCCCch
Q psy7174          93 QILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGA----RMYGVG  143 (188)
Q Consensus        93 qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~----~~~~~~  143 (188)
                      |+++||.|||+.+       |+|+       +|++|||++.           ..++..|  +|||.+...    ..++.+
T Consensus       121 ql~~al~~lH~~~i~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~~~  198 (275)
T cd06608         121 ETLRGLAYLHENKVIHRDIKGQNILLTKNAEVKLVDFGVSAQLDSTLGRRNTFIGTPYW--MAPEVIACDEQPDASYDAR  198 (275)
T ss_pred             HHHHHHHHHhcCCcccCCCCHHHEEEccCCeEEECCCccceecccchhhhcCccccccc--cCHhHhcccccccCCcccc
Confidence            9999999999988       4444       6999999753           3356678  999987532    236789


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         144 IDMWAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       144 ~DiwslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                      +|+||+|++++++++|++||...+.......
T Consensus       199 ~Dv~slG~il~~l~~g~~p~~~~~~~~~~~~  229 (275)
T cd06608         199 SDVWSLGITAIELADGKPPLCDMHPMRALFK  229 (275)
T ss_pred             ccHHHhHHHHHHHHhCCCCccccchHHHHHH
Confidence            9999999999999999999976554443333

Serine/threonine kinases (STKs), Class III myosin-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The class III myosin-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Class III myosins are motor proteins with an N-terminal kinase catalytic domain and a C-terminal actin-binding motor domain. Class III myosins are present in the photoreceptors of invertebrates and vertebrates and in the auditory hair cells of mammals. The kinase domain of myosin III can phosphorylate several cytoskeletal proteins, conventional myosin regulatory light chains, and can autophosphorylate the C-terminal motor domain. Myosin I

>cd05079 PTKc_Jak1_rpt2 Catalytic (repeat 2) domain of the Protein Tyrosine Kinase, Janus kinase 1

Probab=99.89  E-value=2.1e-22  Score=156.74  Aligned_cols=129  Identities=20%  Similarity=0.262  Sum_probs=102.6

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      ....+.+.+|++++++++||||+++++++..      .++...++++||+++++|..+.         ..+..++ .|++
T Consensus        47 ~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~g~~L~~~l~~~~~~~~~~~~~~i~-~~i~  119 (284)
T cd05079          47 GNHIADLKKEIEILRNLYHENIVKYKGICTE------DGGNGIKLIMEFLPSGSLKEYLPRNKNKINLKQQLKYA-VQIC  119 (284)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCeeeeeeEEec------CCCCceEEEEEccCCCCHHHHHHhccCCCCHHHHHHHH-HHHH
Confidence            3445678899999999999999999997521      2245679999999999998752         2345566 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCCCCchhHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      .||+|||+++       |+|+       +|++|||++..              .++..|  +|||.+.+.. ++.++|+|
T Consensus       120 ~aL~~lH~~gi~H~dlkp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~~~y--~apE~~~~~~-~~~~~Di~  196 (284)
T cd05079         120 KGMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDLDSPVFW--YAPECLIQSK-FYIASDVW  196 (284)
T ss_pred             HHHHHHHHCCeeecccchheEEEcCCCCEEECCCccccccccCccceeecCCCCCCccc--cCHHHhccCC-CCccccch
Confidence            9999999998       6666       59999997642              233458  8999987755 88999999


Q ss_pred             HHHHHHHHHHhCCCCC
Q psy7174         148 AVGCIICELLLKAPFL  163 (188)
Q Consensus       148 slG~il~el~~g~~pf  163 (188)
                      |+||++|+++++..|.
T Consensus       197 slG~il~ellt~~~~~  212 (284)
T cd05079         197 SFGVTLYELLTYCDSE  212 (284)
T ss_pred             hhhhhhhhhhcCCCCC
Confidence            9999999999876543

Protein Tyrosine Kinase (PTK) family; Janus kinase 1 (Jak1); catalytic (c) domain (repeat 2). The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak1 is a member of the Janus kinase (Jak) subfamily of proteins, which are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal tyr kinase domain. Jaks are crucial for cytokine receptor signaling. They are activated by autophosphorylation upon cytokine-induced receptor aggregation, and subsequently trigger downstream signaling events such as the phosphorylation of signal transducers a

>cd05037 PTK_Jak_rpt1 Pseudokinase (repeat 1) domain of the Protein Tyrosine Kinases, Janus kinases

Probab=99.89  E-value=3.7e-22  Score=152.86  Aligned_cols=128  Identities=15%  Similarity=0.133  Sum_probs=103.7

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl   98 (188)
                      ...+.+|+.++++++||||+++++++        .. ...++++||+.++++..+.         ..+..++ .|++.||
T Consensus        45 ~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~-~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~~l  114 (259)
T cd05037          45 SLAFFETASLMSQLSHKHLVKLYGVC--------VR-DENIMVEEYVKFGPLDVFLHREKNNVSLHWKLDVA-KQLASAL  114 (259)
T ss_pred             HHHHHHHHHHHHcCCCcchhheeeEE--------ec-CCcEEEEEcCCCCcHHHHHHhhccCCCHHHHHHHH-HHHHHHH
Confidence            57788999999999999999999975        22 4579999999999998752         2345555 7999999


Q ss_pred             HHHhhcC-------CCCe--------------EEEecCCcccc-------cccccccCCCCcccccc-CCCCchhHHHHH
Q psy7174          99 QALKSSM-------PALL--------------KKFVGIGIGRH-------VCTLYCTRGAPELLFGA-RMYGVGIDMWAV  149 (188)
Q Consensus        99 ~~lH~~~-------~~~i--------------lkl~dfg~~~~-------~~~~~y~~~aPe~~~~~-~~~~~~~Diwsl  149 (188)
                      .|||+++       |+|+              +|++|||++..       .++..|  +|||.+... ..++.++|+||+
T Consensus       115 ~~LH~~~i~H~dlkp~Nill~~~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~Di~sl  192 (259)
T cd05037         115 HYLEDKKLVHGNVCGKNILVARYGLNEGYVPFIKLSDPGIPITVLSREERVERIPW--IAPECIRNGQASLTIAADKWSF  192 (259)
T ss_pred             HHHhhCCeecccCccceEEEecCccccCCceeEEeCCCCcccccccccccccCCCc--cChhhhcCCCCCcchhhHHHHH
Confidence            9999988       4443              68999998654       356678  999998765 248899999999


Q ss_pred             HHHHHHHHh-CCCCCCCCC
Q psy7174         150 GCIICELLL-KAPFLPGES  167 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~  167 (188)
                      |+++|++++ |..|+...+
T Consensus       193 G~~~~~l~~~~~~p~~~~~  211 (259)
T cd05037         193 GTTLLEICSNGEEPLSTLS  211 (259)
T ss_pred             HHHHHHHHhCCCCCcccCC
Confidence            999999998 577876553

Protein Tyrosine Kinase (PTK) family; Janus kinase (Jak) subfamily; pseudokinase domain (repeat1). The Jak subfamily is composed of Jak1, Jak2, Jak3, TYK2, and similar proteins. The PTKc (catalytic domain) family to which this subfamily belongs, is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Jak subfamily proteins are cytoplasmic (or nonreceptor) tyr kinases containing an N-terminal FERM domain, followed by a Src homology 2 (SH2) domain, a pseudokinase domain, and a C-terminal catalytic tyr kinase domain. The pseudokinase domain shows similarity to tyr kinases but lacks crucial residues for catalytic activity and ATP binding. It modulates the ki

>cd05579 STKc_MAST_like Catalytic domain of Microtubule-associated serine/threonine kinase-like proteins

Probab=99.89  E-value=1.8e-22  Score=154.71  Aligned_cols=161  Identities=20%  Similarity=0.294  Sum_probs=122.4

Q ss_pred             cccccc-----cCCccccccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+....   ....+.+.+|++++++++||||+++++.+        ..+...++++|++.+
T Consensus         6 ~~~vy~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~   77 (265)
T cd05579           6 YGRVFLAKKKSTGDIYAIKVIKKADMIRKNQVDQVLTERDILSQAQSPYVVKLYYSF--------QGKKNLYLVMEYLPG   77 (265)
T ss_pred             ceEEEEEEECCCCCEEEEEEecchhhhhhhHHHHHHHHHHHHHhCCCcchhHHHHhe--------ecCcEEEEEEecCCC
Confidence            677776     13333355444432   24556788999999999999999998864        456788999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------------
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------------  120 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------  120 (188)
                      +++..+.        ..+..++ .|+++||.|||+.+       |+|+       +|++|||++..              
T Consensus        78 ~~L~~~l~~~~~~~~~~~~~i~-~qi~~~L~~lH~~~i~H~di~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  156 (265)
T cd05579          78 GDLASLLENVGSLDEDVARIYI-AEIVLALEYLHSNGIIHRDLKPDNILIDSNGHLKLTDFGLSKVGLVRRQINLNDDEK  156 (265)
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHcCeecCCCCHHHeEEcCCCCEEEEecccchhcccCcccccccccc
Confidence            9987652        3455566 89999999999988       3344       69999997542              


Q ss_pred             -----cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         121 -----VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       121 -----~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                           .++..|  ++||...... ++.++|+||+|++++++++|..||......+....+..
T Consensus       157 ~~~~~~~~~~~--~~Pe~~~~~~-~~~~~Dv~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~  215 (265)
T cd05579         157 EDKRIVGTPDY--IAPEVILGQG-HSKTVDWWSLGCILYEFLVGIPPFHGETPEEIFQNILN  215 (265)
T ss_pred             cccCcccCccc--cCHHHhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHhc
Confidence                 345578  8999987755 88999999999999999999999987776665555543

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The MAST kinase subfamily includes MAST kinases, MAST-like (MASTL) kinases, and fungal kinases with similarity to Saccharomyces cerevisiae Rim15 and Schizosaccharomyces pombe cek1. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. MASTL kinases carry only a catalytic domain which contains a long insert re

>PHA03209 serine/threonine kinase US3; Provisional

Probab=99.89  E-value=6.7e-23  Score=164.92  Aligned_cols=147  Identities=17%  Similarity=0.233  Sum_probs=107.7

Q ss_pred             ccccccc-cCCcc-ccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           4 VCFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         4 ~~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      .||.||+ ..+-. ..+++|..   ......+|+.++++++||||+++++++        ..+...++++|++.+..+..
T Consensus        78 ~~g~Vy~~~~~~~~~~valK~~---~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~l~~~  146 (357)
T PHA03209         78 SEGRVFVATKPGQPDPVVLKIG---QKGTTLIEAMLLQNVNHPSVIRMKDTL--------VSGAITCMVLPHYSSDLYTY  146 (357)
T ss_pred             CCeEEEEEEECCCCceEEEEeC---CccccHHHHHHHHhCCCCCCcChhheE--------EeCCeeEEEEEccCCcHHHH
Confidence            3677887 22111 13333331   123346799999999999999999976        34567899999996544333


Q ss_pred             H--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCC
Q psy7174          82 F--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRG  129 (188)
Q Consensus        82 ~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~  129 (188)
                      +        ...+..++ .|++.||.|||+++       |+|+       +||+|||++.          ..||..|  +
T Consensus       147 l~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~gt~~y--~  223 (357)
T PHA03209        147 LTKRSRPLPIDQALIIE-KQILEGLRYLHAQRIIHRDVKTENIFINDVDQVCIGDLGAAQFPVVAPAFLGLAGTVET--N  223 (357)
T ss_pred             HHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEECCCCCEEEecCccccccccCcccccccccccc--c
Confidence            2        23455666 79999999999998       5555       5999999864          3477889  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCC
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLLK-APFLPG  165 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~  165 (188)
                      |||++.+.. ++.++|+||+||++|||+++ .++|..
T Consensus       224 aPE~~~~~~-~~~~~DiwSlGvvl~ell~~~~~~f~~  259 (357)
T PHA03209        224 APEVLARDK-YNSKADIWSAGIVLFEMLAYPSTIFED  259 (357)
T ss_pred             CCeecCCCC-CCchhhHHHHHHHHHHHHHcCCccccC
Confidence            999998765 89999999999999999975 445443

>cd07851 STKc_p38 Catalytic domain of the Serine/Threonine Kinase, p38 Mitogen-Activated Protein Kinase

Probab=99.89  E-value=8.2e-23  Score=163.46  Aligned_cols=153  Identities=29%  Similarity=0.525  Sum_probs=117.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGL   98 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl   98 (188)
                      ...+.+.+|+.++++++||||+++++++....  ........++++|++ ++++..+       +..+..++ .|+++||
T Consensus        56 ~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~lv~e~~-~~~L~~~~~~~~l~~~~~~~~~-~ql~~aL  131 (343)
T cd07851          56 IHAKRTYRELRLLKHMDHENVIGLLDVFTPAS--SLEDFQDVYLVTHLM-GADLNNIVKCQKLSDDHIQFLV-YQILRGL  131 (343)
T ss_pred             hHHHHHHHHHHHHHhccCCCHHHHHHHhhccc--cccccccEEEEEecC-CCCHHHHHhcCCCCHHHHHHHH-HHHHHHH
Confidence            34466788999999999999999998752211  012223478999998 4566654       34566677 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                      .|||+.+       |+|+       +|++|||++.        ..++..|  +|||.+.+...++.++|+||+||++|++
T Consensus       132 ~~LH~~gi~H~dlkp~Nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~DvwslGv~l~el  209 (343)
T cd07851         132 KYIHSAGIIHRDLKPSNIAVNEDCELKILDFGLARHTDDEMTGYVATRWY--RAPEIMLNWMHYNQTVDIWSVGCIMAEL  209 (343)
T ss_pred             HHHHHCCeecCCCCHHHeEECCCCCEEEccccccccccccccCCcccccc--cCHHHHhCCCCCCchHhHHHHHHHHHHH
Confidence            9999988       4444       6999999765        3457789  9999986543478999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ++|++||.+.+....+..+.+..+.|++
T Consensus       210 ltg~~pf~~~~~~~~~~~i~~~~~~~~~  237 (343)
T cd07851         210 LTGKTLFPGSDHIDQLKRIMNLVGTPDE  237 (343)
T ss_pred             HhCCCCCCCCChHHHHHHHHHhcCCCCH
Confidence            9999999998888888888777665543

Serine/Threonine Kinases (STKs), p38 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They function in the regulation of the cell cycle, cell development, cell differentiation, senescence, tumorigenesis, apoptosis, pain development and pain progression, and immune responses. p38 kinases are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK

>cd05606 STKc_beta_ARK Catalytic domain of the Protein Serine/Threonine Kinase, beta-adrenergic receptor kinase

Probab=99.89  E-value=3.2e-22  Score=155.52  Aligned_cols=151  Identities=17%  Similarity=0.209  Sum_probs=110.8

Q ss_pred             cccccc-----cCCccccccccccch---hhhhHHHHHH---HHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDV---NVETQAKAEG---KQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~---~~~~~~~~E~---~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+     +++..++|.+.+...   ........|.   +.++..+||||+++++++        .+....++++||
T Consensus         7 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~v~e~   78 (278)
T cd05606           7 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF--------HTPDKLSFILDL   78 (278)
T ss_pred             CeEEEEEEEecCCCEEEEEEeeccccccchhHHHHHHHHHHHHHHHhCCCCcEeeeeeee--------ecCCEEEEEEec
Confidence            788886     223444554433211   1112233444   344556799999999875        345678999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------ccc
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVC  122 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~  122 (188)
                      +.+++|..+        +..+..++ .|++.||.|||+.+       |+|+       +|++|||++.         ..|
T Consensus        79 ~~g~~L~~~l~~~~~l~~~~~~~~~-~ql~~~l~~lH~~~i~H~di~p~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~  157 (278)
T cd05606          79 MNGGDLHYHLSQHGVFSEAEMRFYA-AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  157 (278)
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCEEcCCCCHHHEEECCCCCEEEccCcCccccCccCCcCcCC
Confidence            999999765        34566677 79999999999988       4454       6999999754         356


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      +..|  +|||.+.+...++.++|+||+|+++|++++|+.||.+.
T Consensus       158 ~~~y--~aPE~~~~~~~~~~~~Di~s~G~~l~~l~~g~~p~~~~  199 (278)
T cd05606         158 THGY--MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQH  199 (278)
T ss_pred             CcCC--cCcHHhcCCCCCCcccchHhHHHHHHHHHhCCCCCCCC
Confidence            7889  99999875444889999999999999999999999765

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, beta-adrenergic receptor kinase (beta-ARK) group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. The beta-ARK group is co

>cd07857 STKc_MPK1 Catalytic domain of the Serine/Threonine Kinase, Fungal Mitogen-Activated Protein Kinase MPK1

Probab=99.89  E-value=2.4e-22  Score=160.01  Aligned_cols=149  Identities=32%  Similarity=0.499  Sum_probs=115.2

Q ss_pred             hhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|++++++++ ||||+++++.+...    .......++++|++. +++...        +..+..++ .|++.||
T Consensus        45 ~~~~~~E~~~l~~l~~h~~iv~~~~~~~~~----~~~~~~~~~~~e~~~-~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL  118 (332)
T cd07857          45 AKRALRELKLLRHFRGHKNITCLYDMDIVF----PGNFNELYLYEELME-ADLHQIIRSGQPLTDAHFQSFI-YQILCGL  118 (332)
T ss_pred             HHHHHHHHHHHHHhcCCCChheeeeeeeec----cccCCcEEEEEeccc-CCHHHHHhcCCCCCHHHHHHHH-HHHHHHH
Confidence            466789999999994 99999999864211    122245678888876 455543        34556667 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc---------------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR---------------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      .|||+.+       |+|+       +||+|||++.               ..|+..|  +|||.+.+...++.++|+||+
T Consensus       119 ~~LH~~givH~dlkp~Nili~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~g~~~y--~aPE~~~~~~~~~~~~Di~sl  196 (332)
T cd07857         119 KYIHSANVLHRDLKPGNLLVNADCELKICDFGLARGFSENPGENAGFMTEYVATRWY--RAPEIMLSFQSYTKAIDVWSV  196 (332)
T ss_pred             HHHHhCCcccCCCCHHHeEEcCCCCEEeCcCCCceecccccccccccccCcccCccc--cCcHHHhCCCCCCcHHHHHHH
Confidence            9999998       5555       6999999754               2467789  999988664448999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ||++|++++|++||.+.+....+..+...++.|++
T Consensus       197 Gv~l~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~  231 (332)
T cd07857         197 GCILAELLGRKPVFKGKDYVDQLNQILQVLGTPDE  231 (332)
T ss_pred             HHHHHHHHhCCcCCCCCCHHHHHHHHHHHhCCCCH
Confidence            99999999999999998888888888777766543

Serine/Threonine Kinases (STKs), Fungal Mitogen-Activated Protein Kinase (MAPK) MPK1 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MPK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. This subfamily is composed of the MAPKs MPK1 from Saccharomyces cerevisiae, Pmk1 from Schizosaccharomyces pombe, and similar proteins. MAPKs are important mediators of cellular responses to extracellular signals. MPK1 (also called Slt2) and Pmk1 (also called Spm1) are stress-activated MAPKs that regulate the cell wall integrity (CWI) pathway, and are therefore important in the maintainance of cell shape, cell wall co

>cd07834 STKc_MAPK Catalytic domain of the Serine/Threonine Kinase, Mitogen-Activated Protein Kinase

Probab=99.89  E-value=1.6e-22  Score=160.56  Aligned_cols=176  Identities=31%  Similarity=0.469  Sum_probs=130.9

Q ss_pred             cccccc-c----CCccccccccccc--hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD--VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~--~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|.||+ .    ++..++|.+.+..  ....+.+.+|+++++.++||||+++.+++...   ........++++||+.+ 
T Consensus        13 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~~---~~~~~~~~~lv~e~~~~-   88 (330)
T cd07834          13 YGVVCSAVDKRTGRKVAIKKISNVFDDLIDAKRILREIKLLRHLRHENIIGLLDILRPP---SPEDFNDVYIVTELMET-   88 (330)
T ss_pred             CeEEEEEEeCCCCcEEEEEeeccccccchhhhhHHHHHHHHHhcCCcchhhhhhhhccc---CcccccceEEEecchhh-
Confidence            566776 2    2223344443322  34557789999999999999999999975321   11222467999999985 


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------cc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------HV  121 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~  121 (188)
                      ++..+        +..+..++ .|++.||+|||+.+       |.|+       ++++|||++.              ..
T Consensus        89 ~l~~~l~~~~~l~~~~~~~i~-~~l~~~l~~LH~~gi~H~dlkp~nili~~~~~~~L~dfg~~~~~~~~~~~~~~~~~~~  167 (330)
T cd07834          89 DLHKVIKSPQPLTDDHIQYFL-YQILRGLKYLHSANVIHRDLKPSNILVNSNCDLKICDFGLARGVDPDEDEKGFLTEYV  167 (330)
T ss_pred             hHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccCceEeecccccccccccccc
Confidence            55443        33455566 89999999999998       4444       6999999754              23


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      ++..|  +|||.+.+...++.++|+||+|+++|++++|++||.+.+..+.+..+....+.|+++.|
T Consensus       168 ~~~~y--~aPE~~~~~~~~~~~sDi~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  231 (330)
T cd07834         168 VTRWY--RAPELLLSSSRYTKAIDIWSVGCIFAELLTRKPLFPGRDYIDQLNLIVEVLGTPSEEDL  231 (330)
T ss_pred             cccCc--CCceeeecccCCCcchhHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHhcCCCChhHh
Confidence            46678  99999987635899999999999999999999999999988888888888877766543

Serine/Threonine Kinases (STKs), Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs serve as important mediators of cellular responses to extracellular signals. They control critical cellular functions including differentiation, proliferation, migration, and apoptosis. They are also implicated in the pathogenesis of many diseases including multiple types of cancer, stroke, diabetes, and chronic inflammation. Typical MAPK pathways involve a triple kinase core cascade comprising of the MAPK, which is phosphorylated and

>cd05633 STKc_GRK3 Catalytic domain of the Protein Serine/Threonine Kinase, G protein-coupled Receptor Kinase 3

Probab=99.89  E-value=4.1e-22  Score=155.09  Aligned_cols=152  Identities=17%  Similarity=0.194  Sum_probs=110.7

Q ss_pred             ccccccc-c----CCccccccccccc---hhhhhHHHHHHHHHH---hCCCCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           4 VCFKPFQ-Q----SKWSPNTPMARCD---VNVETQAKAEGKQDR---RLDYANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         4 ~~g~v~~-~----~~~~~~~~i~~~~---~~~~~~~~~E~~il~---~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      -||.||+ .    ++..++|.+.+..   ........+|..+++   ..+||||+.+++.+        ..++..+++||
T Consensus         6 ~~g~Vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~lv~e   77 (279)
T cd05633           6 GFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMTYAF--------HTPDKLCFILD   77 (279)
T ss_pred             CCeEEEEEEECCCCcEEEEEEEEccccccchHHHHHHHHHHHHHHHhhCCCCcEeEEEEEE--------ecCCeEEEEEe
Confidence            3788887 2    2333344443321   112233445554444   34699999998875        34567899999


Q ss_pred             ccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------cc
Q psy7174          73 IFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HV  121 (188)
Q Consensus        73 ~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~  121 (188)
                      |+.+++|..+        +..+..++ .|++.||.|||+.+       |+|+       +|++|||++.         ..
T Consensus        78 ~~~~~~L~~~i~~~~~l~~~~~~~i~-~qi~~al~~lH~~~ivH~dikp~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~  156 (279)
T cd05633          78 LMNGGDLHYHLSQHGVFSEKEMRFYA-TEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV  156 (279)
T ss_pred             cCCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcCCCCCCHHHEEECCCCCEEEccCCcceeccccCccCcC
Confidence            9999999765        24466666 89999999999988       5555       5899999864         34


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ++..|  +|||.+.....++.++|+||+||++|++++|..||.+.
T Consensus       157 ~~~~y--~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~pf~~~  199 (279)
T cd05633         157 GTHGY--MAPEVLQKGTAYDSSADWFSLGCMLFKLLRGHSPFRQH  199 (279)
T ss_pred             CCcCc--cCHHHhcCCCCCCchhhhHHHHHHHHHHHhCCCCcCCC
Confidence            78889  99999864344889999999999999999999999654

Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK3 isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. GRK3 (also known as beta-adrenergic receptor kinase 2) is wi

>cd06633 STKc_TAO3 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 3

Probab=99.89  E-value=4.3e-22  Score=157.41  Aligned_cols=138  Identities=22%  Similarity=0.298  Sum_probs=107.6

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.+|+++++.++|||++++++++        .++...++++||+.+..+..+        ...+..++ .|++.|+
T Consensus        64 ~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~l~~~l~~~~~~l~~~~~~~~~-~qi~~al  134 (313)
T cd06633          64 KWQDIIKEVKFLQQLKHPNTIEYKGCY--------LKEHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAIT-HGALQGL  134 (313)
T ss_pred             HHHHHHHHHHHHHhCCCCCCccEEEEE--------EeCCEEEEEEecCCCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHH
Confidence            345678999999999999999999986        445678999999976443332        23445566 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-------ccccccccCCCCccccc--cCCCCchhHHHHHHHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~e  155 (188)
                      .|||+.+       |+|+       +|++|||++.       ..++..|  +|||.+..  ...++.++|+||+||++|+
T Consensus       135 ~~LH~~gi~H~dl~p~nili~~~~~~kL~dfg~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~sDv~slGvil~e  212 (313)
T cd06633         135 AYLHSHNMIHRDIKAGNILLTEPGQVKLADFGSASKSSPANSFVGTPYW--MAPEVILAMDEGQYDGKVDVWSLGITCIE  212 (313)
T ss_pred             HHHHHCCeecCCCChhhEEECCCCCEEEeecCCCcccCCCCCccccccc--cChhhccccCCCCCCchhhHHHHHHHHHH
Confidence            9999998       5555       6999999754       3466789  99999842  2347889999999999999


Q ss_pred             HHhCCCCCCCCChHHHHHHH
Q psy7174         156 LLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       156 l~~g~~pf~~~~~~~~~~~i  175 (188)
                      +++|.+||.+.+.......+
T Consensus       213 l~~g~~p~~~~~~~~~~~~~  232 (313)
T cd06633         213 LAERKPPLFNMNAMSALYHI  232 (313)
T ss_pred             HHhCCCCCCCCChHHHHHHH
Confidence            99999999876655544444

Serine/threonine kinases (STKs), thousand-and-one amino acids 3 (TAO3) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. TAO3 is also known as JIK (JNK inhibitory kinase) or KFC (kinase from chicken). It specifically activates c-Jun N-terminal kinase (JNK), presumably by phosphorylating and activating MKK4/MKK7. In Saccharomyces cerevisiae, TAO3 is a co

>cd07880 STKc_p38gamma_MAPK12 Catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase

Probab=99.89  E-value=3.9e-22  Score=159.62  Aligned_cols=147  Identities=27%  Similarity=0.483  Sum_probs=112.5

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~   99 (188)
                      ..+.+.+|++++++++||||+++++++....  ........++++|++ ++++..+       +..+..++ .|+++||.
T Consensus        57 ~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~lv~e~~-~~~l~~~~~~~~l~~~~~~~i~-~qi~~al~  132 (343)
T cd07880          57 FAKRAYRELRLLKHMKHENVIGLLDVFTPDL--SLDRFHDFYLVMPFM-GTDLGKLMKHEKLSEDRIQFLV-YQMLKGLK  132 (343)
T ss_pred             HHHHHHHHHHHHHhcCCCCccceeeeecCCc--cccccceEEEEEecC-CCCHHHHHhcCCCCHHHHHHHH-HHHHHHHH
Confidence            3456889999999999999999999863211  001112458999998 5666654       34566677 89999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL  157 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~  157 (188)
                      |||+.+       |+|+       +|++|||++.        ..++..|  +|||.+.+...++.++|+||+|+++|+++
T Consensus       133 ~LH~~gi~H~dlkp~Nill~~~~~~kl~dfg~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~ll~~l~  210 (343)
T cd07880         133 YIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQTDSEMTGYVVTRWY--RAPEVILNWMHYTQTVDIWSVGCIMAEML  210 (343)
T ss_pred             HHHhCCeecCCCCHHHEEEcCCCCEEEeecccccccccCccccccCCcc--cCHHHHhCCCCCCcHHHHHHHHHHHHHHH
Confidence            999988       4444       6999999865        3457788  99999876444889999999999999999


Q ss_pred             hCCCCCCCCChHHHHHHHHhhc
Q psy7174         158 LKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       158 ~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      +|++||.+.+.......+....
T Consensus       211 ~g~~pf~~~~~~~~~~~~~~~~  232 (343)
T cd07880         211 TGKPLFKGHDHLDQLMEIMKVT  232 (343)
T ss_pred             hCCCCCCCCCHHHHHHHHHHhc
Confidence            9999999887766666665543

Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MAPK12

>cd07838 STKc_CDK4_6_like Catalytic domain of Cyclin-Dependent protein Kinase 4 and 6-like Serine/Threonine Kinases

Probab=99.89  E-value=3e-22  Score=155.55  Aligned_cols=152  Identities=32%  Similarity=0.552  Sum_probs=114.7

Q ss_pred             hhHHHHHHHHHHhC---CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------HHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRL---DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------YSHLRYLENQQI   94 (188)
Q Consensus        28 ~~~~~~E~~il~~l---~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------~~~~~~~~~~qi   94 (188)
                      ...+.+|+.+++++   +||||+++++++...   ........++++|++.+ ++..+          +..+..++ .|+
T Consensus        42 ~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~---~~~~~~~~~l~~e~~~~-~l~~~l~~~~~~~l~~~~~~~~~-~~i  116 (287)
T cd07838          42 PLSTLREIALLKQLESFEHPNIVRLLDVCHGP---RTDRELKLTLVFEHVDQ-DLATYLSKCPKPGLPPETIKDLM-RQL  116 (287)
T ss_pred             hhhHHHHHHHHHHhhccCCCCcceEEEEEeec---cCCCCceeEEEehhccc-CHHHHHHHccCCCCCHHHHHHHH-HHH
Confidence            34566788887766   599999999986321   11122348999999975 44432          23455666 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCcccc----------cccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGRH----------VCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~----------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      +.||.|||+.+       |+|+       +|++|||++..          .++..|  +|||.+.+.. ++.++|+||+|
T Consensus       117 ~~al~~LH~~~i~h~~l~~~nili~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~--~~PE~~~~~~-~~~~~Di~s~G  193 (287)
T cd07838         117 LRGVDFLHSHRIVHRDLKPQNILVTSDGQVKIADFGLARIYSFEMALTSVVVTLWY--RAPEVLLQSS-YATPVDMWSVG  193 (287)
T ss_pred             HHHHHHHHHCCeeeccCChhhEEEccCCCEEEeccCcceeccCCcccccccccccc--cChHHhccCC-CCCcchhhhHH
Confidence            99999999998       5555       69999997542          345678  9999998765 88999999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      |++|+|++|.+||.+.+..+.+.++.+....+....|
T Consensus       194 ~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  230 (287)
T cd07838         194 CIFAELFRRRPLFRGTSEADQLDKIFDVIGLPSEEEW  230 (287)
T ss_pred             HHHHHHHhCCCcccCCChHHHHHHHHHHcCCCChHhc
Confidence            9999999999999999888888888776655444333

Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 4 (CDK4) and CDK6-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK4/6-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK4 and CDK6 partner with D-type cyclins to regulate the early G1 phase of the cell cycle. They are the first kinase activated by mitogenic signals to release cells from the G0 arrested state. CDK4 and CDK6 are both

>PF00069 Pkinase: Protein kinase domain Protein kinase; unclassified specificity

Probab=99.89  E-value=2e-22  Score=154.27  Aligned_cols=152  Identities=24%  Similarity=0.279  Sum_probs=116.9

Q ss_pred             cccccc-cCCccc-ccccccc---c--hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC---D--VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~---~--~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .++... .+++|..   .  ........+|+.++++++||||+++++++        ..+...++++|++.++
T Consensus        12 ~g~v~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~--------~~~~~~~~v~~~~~~~   83 (260)
T PF00069_consen   12 FGTVYKAKNKKNGQKVAVKIIDKSEIEEEEREENIREIKILRRLRHPNIVQILDVF--------QDDNYLYIVMEYCPGG   83 (260)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEESTTHHHHHHHHHHHHHHHHHHHTBTTBCHEEEEE--------EESSEEEEEEEEETTE
T ss_pred             CEEEEEEEECCCCeEEEEEEeccccccccccchhhhhhhccccccccccccccccc--------cccccccccccccccc
Confidence            688888 222222 3444442   2  12222345699999999999999999985        3367889999999999


Q ss_pred             cHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ++..+.        ..+..++ .|+++||.+||+.+       |+|+       ++++|||.+.           ..++.
T Consensus        84 ~L~~~l~~~~~~~~~~~~~~~-~qi~~~L~~Lh~~~i~H~dikp~NIl~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~  162 (260)
T PF00069_consen   84 SLQDYLQKNKPLSEEEILKIA-YQILEALAYLHSKGIVHRDIKPENILLDENGEVKLIDFGSSVKLSENNENFNPFVGTP  162 (260)
T ss_dssp             BHHHHHHHHSSBBHHHHHHHH-HHHHHHHHHHHHTTEEESSBSGGGEEESTTSEEEESSGTTTEESTSTTSEBSSSSSSG
T ss_pred             ccccccccccccccccccccc-cccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            988753        3466666 89999999999998       6666       5999999863           34677


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      .|  .|||++.....++.++|+||+|+++++|++|..||.+.+
T Consensus       163 ~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~p~~~~~  203 (260)
T PF00069_consen  163 EY--MAPEVLQQGKKYTRKSDIWSLGIILYELLTGKLPFEESN  203 (260)
T ss_dssp             GG--SCHHHHTTTSSBSTHHHHHHHHHHHHHHHHSSSSSTTSS
T ss_pred             cc--ccccccccccccccccccccccccccccccccccccccc
Confidence            89  999998723348999999999999999999999998773

Serine/Threonine protein kinases, catalytic domain Tyrosine kinase, catalytic domain; InterPro: IPR017442 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases. Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. Eukaryotic protein kinases [, , , , ] are enzymes that belong to a very extensive family of proteins which share a conserved catalytic core common with both serine/threonine and tyrosine protein kinases. There are a number of conserved regions in the catalytic domain of protein kinases. In the N-terminal extremity of the catalytic domain there is a glycine-rich stretch of residues in the vicinity of a lysine residue, which has been shown to be involved in ATP binding. In the central part of the catalytic domain there is a conserved aspartic acid residue which is important for the catalytic activity of the enzyme []. This entry includes protein kinases from eukaryotes and viruses and may include some bacterial hits too.; GO: 0004672 protein kinase activity, 0005524 ATP binding, 0006468 protein phosphorylation; PDB: 3GC7_A 3ZYA_A 3MPT_A 3NEW_A 3MVM_A 1R3C_A 2FST_X 3E93_A 3HV5_B 3OCG_A ....

>cd06610 STKc_OSR1_SPAK Catalytic domain of the Protein Serine/Threonine Kinases, Oxidative stress response kinase and Ste20-related proline alanine-rich kinase

Probab=99.89  E-value=3.4e-22  Score=153.58  Aligned_cols=137  Identities=18%  Similarity=0.243  Sum_probs=110.4

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-----------HHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-----------SHLRYLENQQIL   95 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-----------~~~~~~~~~qi~   95 (188)
                      ..+.+.+|+++++.++|+||+++++.+        ..+...++++|++.++++..+.           ..+..++ .|++
T Consensus        42 ~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~-~ql~  112 (267)
T cd06610          42 SVDELRKEVQAMSQCNHPNVVKYYTSF--------VVGDELWLVMPYLSGGSLLDIMKSSYPRGGLDEAIIATVL-KEVL  112 (267)
T ss_pred             HHHHHHHHHHHHHhcCCCCEEEEEEEE--------eeCCEEEEEEeccCCCcHHHHHHHhcccCCCCHHHHHHHH-HHHH
Confidence            557789999999999999999999865        4467889999999999987753           2345566 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccc---------------ccccccccCCCCccccccCCCCchhHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGR---------------HVCTLYCTRGAPELLFGARMYGVGIDM  146 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~~~~~~~~Di  146 (188)
                      .||.|||+.+       |+|+       +|++|||++.               ..++..|  +|||.+.....++.++|+
T Consensus       113 ~al~~lh~~~i~h~~l~p~ni~~~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~y--~~Pe~~~~~~~~~~~~Dv  190 (267)
T cd06610         113 KGLEYLHSNGQIHRDIKAGNILLGEDGSVKIADFGVSASLADGGDRTRKVRKTFVGTPCW--MAPEVMEQVHGYDFKADI  190 (267)
T ss_pred             HHHHHHHhCCeecCCCCHHhEEEcCCCCEEEcccchHHHhccCccccccccccccCChhh--cChHHHccccCcCcccch
Confidence            9999999988       4444       6999999743               2356678  999998765448899999


Q ss_pred             HHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         147 WAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       147 wslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                      ||+||++++|++|+.||...+....+.+
T Consensus       191 ~slG~i~~~l~~g~~p~~~~~~~~~~~~  218 (267)
T cd06610         191 WSFGITAIELATGAAPYSKYPPMKVLML  218 (267)
T ss_pred             HhHhHHHHHHHhCCCCccccChhhhHHH
Confidence            9999999999999999977665444433

Serine/threonine kinases (STKs), oxidative stress response kinase (OSR1) and Ste20-related proline alanine-rich kinase (SPAK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The OSR1 and SPAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. SPAK is also referred to as STK39 or PASK (proline-alanine-rich STE20-related kinase). OSR1 and SPAK regulate the activity of cation-chloride cotransporters through direct interaction and phosphorylation. They are also implicated in cytoskeletal rearrangement, cell differentiation, transformation and proliferation. OSR1

>cd08222 STKc_Nek11 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 11

Probab=99.89  E-value=3.2e-22  Score=153.63  Aligned_cols=137  Identities=23%  Similarity=0.301  Sum_probs=108.2

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQI   94 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~qi   94 (188)
                      ...++.+|+.++++++||||+++++++        .+....++++||++++++..+.            ..+..++ .|+
T Consensus        45 ~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~-~~l  115 (260)
T cd08222          45 ETVQANQEAQLLSKLDHPAIVKFHASF--------LERDAFCIITEYCEGRDLDCKLEELKHTGKTLSENQVCEWF-IQL  115 (260)
T ss_pred             hHHHHHHHHHHHHhCCCCcHHHHHHHH--------hcCCceEEEEEeCCCCCHHHHHHHHhhcccccCHHHHHHHH-HHH
Confidence            344577899999999999999999975        4456789999999999987642            3345566 799


Q ss_pred             HHHHHHHhhcC-------CCCe------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          95 LEGLQALKSSM-------PALL------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      ++||.|||+.+       |+|+      +|++|||++.           ..++..|  +|||...... ++.++|+||+|
T Consensus       116 ~~~l~~lH~~~i~h~~l~~~nili~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-~~~~~Dv~slG  192 (260)
T cd08222         116 LLGVHYMHQRRILHRDLKAKNIFLKNNLLKIGDFGVSRLLMGSCDLATTFTGTPYY--MSPEALKHQG-YDSKSDIWSLG  192 (260)
T ss_pred             HHHHHHHHHcCccccCCChhheEeecCCEeecccCceeecCCCcccccCCCCCcCc--cCHHHHccCC-CCchhhHHHHH
Confidence            99999999988       4444      6999999753           3356778  9999986644 88899999999


Q ss_pred             HHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         151 CIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      +++|++++|..||.+.+.......+
T Consensus       193 ~~~~~l~~~~~~~~~~~~~~~~~~~  217 (260)
T cd08222         193 CILYEMCCLAHAFEGQNFLSVVLRI  217 (260)
T ss_pred             HHHHHHHhCCCCCCCccHHHHHHHH
Confidence            9999999999999765544443333

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 11 (Nek11) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek11 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Nek11 is involved, through direct phosphorylation, in regulating the degradation of Cdc25A (Cell Division Cycle 25 homolog A), which plays a role in cell cycle progression and in activating cyclin dependent kinases. Nek11 is activated by CHK1 (CHeckpoint Kinase 1) and may be involved in the G2/M check

>PHA03390 pk1 serine/threonine-protein kinase 1; Provisional

Probab=99.89  E-value=9e-22  Score=152.25  Aligned_cols=114  Identities=20%  Similarity=0.269  Sum_probs=95.2

Q ss_pred             CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------C
Q psy7174          42 DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------P  106 (188)
Q Consensus        42 ~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~  106 (188)
                      +||||+++++.|        ..+...++++||+++++|..+        +..+..++ .|+++||.|||+.+       |
T Consensus        67 ~h~~iv~~~~~~--------~~~~~~~iv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lH~~~i~H~dl~p  137 (267)
T PHA03390         67 DNPNFIKLYYSV--------TTLKGHVLIMDYIKDGDLFDLLKKEGKLSEAEVKKII-RQLVEALNDLHKHNIIHNDIKL  137 (267)
T ss_pred             cCCCEEEEEEEE--------ecCCeeEEEEEcCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeCCCCH
Confidence            699999999975        445688999999999999875        34456666 79999999999998       3


Q ss_pred             CC--------eEEEecCCccc-------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         107 AL--------LKKFVGIGIGR-------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       107 ~~--------ilkl~dfg~~~-------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      +|        .++++|||++.       ..++..|  +|||++.+.. ++.++|+||+|+++|++++|+.||.+..
T Consensus       138 ~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~DvwslG~il~~l~~g~~p~~~~~  210 (267)
T PHA03390        138 ENVLYDRAKDRIYLCDYGLCKIIGTPSCYDGTLDY--FSPEKIKGHN-YDVSFDWWAVGVLTYELLTGKHPFKEDE  210 (267)
T ss_pred             HHEEEeCCCCeEEEecCccceecCCCccCCCCCcc--cChhhhcCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCC
Confidence            33        47999999754       3467789  9999997755 8999999999999999999999997554

>cd08530 STKc_CNK2-like Catalytic domain of the Protein Serine/Threonine Kinase, Chlamydomonas reinhardtii CNK2, and similar domains

Probab=99.88  E-value=5e-22  Score=151.76  Aligned_cols=139  Identities=25%  Similarity=0.316  Sum_probs=111.5

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQ   92 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~   92 (188)
                      .....++.+|++++++++|+||+++++++        .++...++++||++++++..+.            ..+..++ .
T Consensus        40 ~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~-~  110 (256)
T cd08530          40 QKEREDAVNEIRILASVNHPNIISYKEAF--------LDGNKLCIVMEYAPFGDLSKAISKRKKKRKLIPEQEIWRIF-I  110 (256)
T ss_pred             HHHHHHHHHHHHHHHhCCCCCchhhhhhh--------ccCCEEEEEehhcCCCCHHHHHHHHHhhcCCCCHHHHHHHH-H
Confidence            34456778999999999999999999875        4457889999999999987753            2344555 7


Q ss_pred             HHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          93 QILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        93 qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      |++.||.|||+.+       |.|+       +|++|||++.         ..++..|  ++||.+.+.. ++.++|+||+
T Consensus       111 ~l~~al~~lh~~~i~h~~l~~~ni~~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~--~~Pe~~~~~~-~~~~~D~~sl  187 (256)
T cd08530         111 QLLRGLQALHEQKILHRDLKSANILLVANDLVKIGDLGISKVLKKNMAKTQIGTPHY--MAPEVWKGRP-YSYKSDIWSL  187 (256)
T ss_pred             HHHHHHHHHhhCCcccCCCCcceEEEecCCcEEEeeccchhhhccCCcccccCCccc--cCHHHHCCCC-CCchhhHHHH
Confidence            9999999999998       5555       5999999754         2356788  9999997755 8899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      |++++++++|+.||...+.......+
T Consensus       188 G~~~~~l~~g~~p~~~~~~~~~~~~~  213 (256)
T cd08530         188 GCLLYEMATFAPPFEARSMQDLRYKV  213 (256)
T ss_pred             HHHHHHHHhCCCCCCCCCHHHHHHHH
Confidence            99999999999999877654443333

Serine/Threonine Kinases (STKs), Chlamydomonas reinhardtii Never In Mitosis gene A (NIMA)-related kinase 1 (CNK2)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Chlamydomonas reinhardtii CNK2-like subfamily belongs to the (NIMA)-related kinase (Nek) family. The Nek family includes seven different Chlamydomonas Neks (CNKs 1-6 and Fa2). This subfamily includes CNK1, and -2. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Chlamydomonas reinhardtii CNK2 has both cilliary and cell cycle functions. It influences flagellar length through promoting flagellar disassembly, an

>cd05046 PTK_CCK4 Pseudokinase domain of the Protein Tyrosine Kinase, Colon Carcinoma Kinase 4

Probab=99.88  E-value=1.2e-21  Score=151.56  Aligned_cols=137  Identities=20%  Similarity=0.289  Sum_probs=108.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-----------------HHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-----------------SHLRYL   89 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-----------------~~~~~~   89 (188)
                      ..+.+.+|++++++++||||+++++++        .+....++++||+.+++|..+.                 ..+..+
T Consensus        51 ~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~i~~~~~~~~~~~~~~l~~~~~~~~  122 (275)
T cd05046          51 LQSEFRRELDMFRKLSHKNVVRLLGLC--------REAEPHYMILEYTDLGDLKQFLRATKSKDEKLKPPPLSTKQKVAL  122 (275)
T ss_pred             HHHHHHHHHHHHHhcCCcceeeeEEEE--------CCCCcceEEEEecCCCcHHHHHHhcccccccccccCCCHHHHHHH
Confidence            346789999999999999999999975        3456789999999999998653                 224455


Q ss_pred             HHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccccccCCCCccccccCCCCch
Q psy7174          90 ENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLYCTRGAPELLFGARMYGVG  143 (188)
Q Consensus        90 ~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~y~~~aPe~~~~~~~~~~~  143 (188)
                      + .|++.||.|||+.+       |.|+       ++++|||++..            .++..|  +|||.+.+.. ++.+
T Consensus       123 ~-~~l~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~-~~~~  198 (275)
T cd05046         123 C-TQIALGMDHLSNARFVHRDLAARNCLVSSQREVKVSLLSLSKDVYNSEYYKLRNALIPLRW--LAPEAVQEDD-FSTK  198 (275)
T ss_pred             H-HHHHHHHHHhhhcCcccCcCccceEEEeCCCcEEEcccccccccCcccccccCCceeEEee--cChhhhccCC-CCch
Confidence            6 79999999999988       6666       58999997542            234558  9999987655 7899


Q ss_pred             hHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         144 IDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       144 ~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      +|+||+|+++|++++ |..||.+.........+
T Consensus       199 ~Di~slG~~l~~l~~~~~~p~~~~~~~~~~~~~  231 (275)
T cd05046         199 SDVWSFGVLMWEVFTQGELPFYGLSDEEVLNRL  231 (275)
T ss_pred             hhHHHHHHHHHHHHhCCCCCccccchHHHHHHH
Confidence            999999999999998 78898765554443333

Protein Tyrosine Kinase (PTK) family; Colon Carcinoma Kinase 4 (CCK4); pseudokinase domain. The PTKc (catalytic domain) family, to which this subfamily belongs, includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. CCK4, also called protein tyrosine kinase 7 (PTK7), is an orphan receptor tyr kinase (RTK) containing an extracellular region with seven immunoglobulin domains, a transmembrane segment, and an intracellular inactive pseudokinase domain. Studies in mice reveal that CCK4 is essential for neural development. Mouse embryos containing a truncated CCK4 die perinatally and display craniorachischisis, a severe form of neural tube defect. The mechanism of action of the CCK4 pseudokinase is s

>cd05103 PTKc_VEGFR2 Catalytic domain of the Protein Tyrosine Kinase, Vascular Endothelial Growth Factor Receptor 2

Probab=99.88  E-value=7.3e-22  Score=158.03  Aligned_cols=131  Identities=20%  Similarity=0.305  Sum_probs=102.9

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      +....+.+|+.++.++ +||||+++++++.       ..+...++++||+.+|+|..+..                    
T Consensus        52 ~~~~~~~~E~~~l~~l~~h~niv~~~~~~~-------~~~~~~~lv~ey~~~g~L~~~i~~~~~~~~~~~~~~~~~~~~~  124 (343)
T cd05103          52 SEHRALMSELKILIHIGHHLNVVNLLGACT-------KPGGPLMVIVEFCKFGNLSNYLRSKRGEFVPYKTKDARFRQGK  124 (343)
T ss_pred             HHHHHHHHHHHHHHhccCCccHhhhcceee-------cCCCceEEEEeccCCCcHHHHHHhcCCcccccccccccccccc
Confidence            3445688999999999 5899999999752       23456789999999999876532                    


Q ss_pred             -------------------------------------------------------HHHHHHHHHHHHHHHHHhhcC----
Q psy7174          85 -------------------------------------------------------HLRYLENQQILEGLQALKSSM----  105 (188)
Q Consensus        85 -------------------------------------------------------~~~~~~~~qi~~gl~~lH~~~----  105 (188)
                                                                             .+..+. .|+++||.|||+++    
T Consensus       125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~i~H~  203 (343)
T cd05103         125 SGYGDISEDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAEQEDLYKKVLTLEDLICYS-FQVAKGMEFLASRKCIHR  203 (343)
T ss_pred             ccccchhhhhhhhccccccccccccccccCCCccccchhhhhhhhhhhhccCCHHHHHHHH-HHHHHHHHHHHhCCeecC
Confidence                                                                   122344 69999999999988    


Q ss_pred             ---CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCC
Q psy7174         106 ---PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAP  161 (188)
Q Consensus       106 ---~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~  161 (188)
                         |.|+       +|++|||++...             ++..|  +|||.+.+.. ++.++|+||+|+++|++++ |..
T Consensus       204 dikp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~~l~el~~~g~~  280 (343)
T cd05103         204 DLAARNILLSENNVVKICDFGLARDIYKDPDYVRKGDARLPLKW--MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGAS  280 (343)
T ss_pred             CCccCeEEEcCCCcEEEEecccccccccCcchhhcCCCCCCcce--ECcHHhcCCC-CCchhhHHHHHHHHHHHHHCCCC
Confidence               6666       599999976421             23458  9999987755 8999999999999999996 899


Q ss_pred             CCCCCC
Q psy7174         162 FLPGES  167 (188)
Q Consensus       162 pf~~~~  167 (188)
                      ||.+..
T Consensus       281 p~~~~~  286 (343)
T cd05103         281 PYPGVK  286 (343)
T ss_pred             CCCCcc
Confidence            997654

Protein Tyrosine Kinase (PTK) family; Vascular Endothelial Growth Factor Receptor 2 (VEGFR2); catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. VEGFR2 (or Flk1) is a member of the VEGFR subfamily of proteins, which are receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with seven immunoglobulin (Ig)-like domains, a transmembrane segment, and an intracellular catalytic domain. The binding of VEGFRs to their ligands, the VEGFs, leads to receptor dimerization, activation, and intracellular signaling. The carboxyl terminus of VEGFR2 plays an important role in its autophosp

>cd08226 PK_STRAD_beta Pseudokinase domain of STE20-related kinase adapter protein beta

Probab=99.88  E-value=7e-22  Score=157.08  Aligned_cols=139  Identities=17%  Similarity=0.144  Sum_probs=108.2

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQIL   95 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi~   95 (188)
                      +..+.+.+|+.+++.++||||++++++|        ..+...++++||+.++++..+.          ..+..++ .|++
T Consensus        41 ~~~~~~~~e~~~~~~l~h~niv~~~~~~--------~~~~~~~~v~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~-~qi~  111 (328)
T cd08226          41 EHLKALQNEVVLSHFFRHPNIMTSWTVF--------TTGSWLWVISPFMAYGSANSLLKTYFPEGMSEALIGNIL-FGAL  111 (328)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcceEeeeE--------ecCCceEEEEecccCCCHHHHHHhhcccCCCHHHHHHHH-HHHH
Confidence            3456788999999999999999999986        4466789999999999988753          2344566 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCccc------------------ccccccccCCCCcccccc-CCCCc
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGR------------------HVCTLYCTRGAPELLFGA-RMYGV  142 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~~-~~~~~  142 (188)
                      .||+|||+.+       |+|+       +|++||+...                  ..++..|  +|||++.+. ..++.
T Consensus       112 ~aL~~lH~~~ivHrDlkp~Nill~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~  189 (328)
T cd08226         112 RGLNYLHQNGYIHRNIKASHILISGDGLVSLSGLSHLYSLVRNGQKAKVVYDFPQFSTSVLPW--LSPELLRQDLYGYNV  189 (328)
T ss_pred             HHHHHHHhCCeecCCCCHHHEEEeCCCcEEEechHHHhhhhccCccccccccccccccCccCc--cChhhhcCCCCCCCc
Confidence            9999999988       5555       5888886311                  1123458  999998653 23789


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         143 GIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       143 ~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      ++|+||+||++|++++|++||.+.........+
T Consensus       190 ~~DiwslG~~l~el~~g~~p~~~~~~~~~~~~~  222 (328)
T cd08226         190 KSDIYSVGITACELATGRVPFQDMLRTQMLLQK  222 (328)
T ss_pred             hhhHHHHHHHHHHHHhCCCCCCCcChHHHHHHH
Confidence            999999999999999999999877655544443

Protein Kinase family, STE20-related kinase adapter protein (STRAD) beta subfamily, pseudokinase domain. The STRAD-beta subfamily is part of a larger superfamily that includes the catalytic domains of serine/threonine kinases (STKs), protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The pseudokinase domain shows similarity to protein kinases but lacks crucial residues for catalytic activity. STRAD forms a complex with the scaffolding protein MO25, and the STK, LKB1, resulting in the activation of the kinase. In the complex, LKB1 phosphorylates and activates adenosine monophosphate-activated protein kinases (AMPKs), which regulate cell energy metabolism and cell polarity. LKB1 is a tumor suppressor linked to the rare inherited disease, Peutz-Jeghers syndrome, which is characterized by a predisposition to benign polyps and hyperpig

>cd06629 STKc_MAPKKK_Bck1_like Catalytic domain of fungal Bck1-like MAP Kinase Kinase Kinases

Probab=99.88  E-value=9.1e-22  Score=152.04  Aligned_cols=131  Identities=24%  Similarity=0.406  Sum_probs=106.1

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      +.+.+|+++++.++||||+++++++        ..+...++++||++++++...        ...+..++ .|++.||.|
T Consensus        53 ~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~  123 (272)
T cd06629          53 KALRSEIETLKDLDHLNIVQYLGFE--------TTEEYLSIFLEYVPGGSIGSCLRTYGRFEEQLVRFFT-EQVLEGLAY  123 (272)
T ss_pred             HHHHHHHHHHHhcCCCCcceEEEEe--------ccCCceEEEEecCCCCcHHHHHhhccCCCHHHHHHHH-HHHHHHHHH
Confidence            4678899999999999999999975        345678999999999998765        23456666 899999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccC-CCCchhHHHHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGAR-MYGVGIDMWAVGCI  152 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~-~~~~~~DiwslG~i  152 (188)
                      ||+.+       |+|+       +|++|||++..             .++..|  +|||.+.... .++.++|+||+|++
T Consensus       124 lH~~~i~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y--~~PE~~~~~~~~~~~~~Dv~slG~~  201 (272)
T cd06629         124 LHSKGILHRDLKADNLLVDADGICKISDFGISKKSDDIYDNDQNMSMQGSVFW--MAPEVIHSYSQGYSAKVDIWSLGCV  201 (272)
T ss_pred             HhhCCeeecCCChhhEEEcCCCeEEEeeccccccccccccccccccccCCccc--cCHHHhccccCCCCccchhHHHHHH
Confidence            99988       5555       59999997542             345678  9999986543 37889999999999


Q ss_pred             HHHHHhCCCCCCCCChHH
Q psy7174         153 ICELLLKAPFLPGESDLD  170 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~  170 (188)
                      ++++++|..||...+...
T Consensus       202 l~~l~~g~~p~~~~~~~~  219 (272)
T cd06629         202 VLEMFAGRRPWSDEEAIA  219 (272)
T ss_pred             HHHHHhCCCCCcCcchHH
Confidence            999999999997655443

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, fungal Bck1-like proteins, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this group include the MAPKKKs Saccharomyces cerevisiae Bck1 and Schizosaccharomyces pombe Mkh1, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Budding yeast Bck1 is part of the cell inte

>cd06634 STKc_TAO2 Catalytic domain of the Protein Serine/Threonine Kinase, Thousand-and-one amino acids 2

Probab=99.88  E-value=7.8e-22  Score=155.53  Aligned_cols=135  Identities=22%  Similarity=0.296  Sum_probs=105.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------YSHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~~~~~~~~~~qi~~   96 (188)
                      ...+++.+|+++++.++|+|++++++++        ..+...++++||+.+ ++...         ...+..++ .|++.
T Consensus        57 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~-~l~~~~~~~~~~l~~~~~~~~~-~~l~~  126 (308)
T cd06634          57 EKWQDIIKEVRFLQKLRHPNTIQYRGCY--------LREHTAWLVMEYCLG-SASDLLEVHKKPLQEVEIAAVT-HGALQ  126 (308)
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEEE--------EcCCeeEEEEEccCC-CHHHHHHHcCCCCCHHHHHHHH-HHHHH
Confidence            3445678999999999999999999976        345678999999975 44432         23455666 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccc-------ccccccccCCCCccccc--cCCCCchhHHHHHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCII  153 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il  153 (188)
                      ||.|||+.+       |.|+       +|++|||++.       ..++..|  +|||.+.+  ...++.++||||+||++
T Consensus       127 ~l~~LH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~~Di~slG~il  204 (308)
T cd06634         127 GLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYW--MAPEVILAMDEGQYDGKVDVWSLGITC  204 (308)
T ss_pred             HHHHHHhCCcccCCCCHHhEEECCCCcEEECCcccceeecCcccccCCccc--cCHHHHhhcccCCCCcccchHHHHHHH
Confidence            999999988       4444       6999999755       3467789  99999752  22378899999999999


Q ss_pred             HHHHhCCCCCCCCChHHHH
Q psy7174         154 CELLLKAPFLPGESDLDQL  172 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~  172 (188)
                      |++++|..||...+.....
T Consensus       205 ~el~~g~~p~~~~~~~~~~  223 (308)
T cd06634         205 IELAERKPPLFNMNAMSAL  223 (308)
T ss_pred             HHHHcCCCCCccccHHHHH
Confidence            9999999998765544333

Serine/threonine kinases (STKs), thousand-and-one amino acids 2 (TAO2) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TAO subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. TAO proteins possess mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MAP3K or MKKK) activity. MAPK signaling cascades are important in mediating cellular responses to extracellular signals. Human TAO2 is also known as prostate-derived Ste20-like kinase (PSK) and was identified in a screen for overexpressed RNAs in prostate cancer. TAO2 activates both p38 and c-Jun N-terminal kinase (JNK), by phosphorylating and activatin

>cd08528 STKc_Nek10 Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase 10

Probab=99.88  E-value=1.9e-21  Score=150.03  Aligned_cols=138  Identities=22%  Similarity=0.372  Sum_probs=107.7

Q ss_pred             hhHHHHHHHHHHh-CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRR-LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQI   94 (188)
Q Consensus        28 ~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~qi   94 (188)
                      ..++.+|+.++.+ ++||||+++++++        ..+...++++||+.++++..+.            ..+..++ .|+
T Consensus        52 ~~~~~~e~~~l~~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~-~~l  122 (269)
T cd08528          52 IGDIVSEVTIIKEQLRHPNIVRYYKTF--------LENDRLYIVMDLIEGAPLGEHFNSLKEKKQRFTEERIWNIF-VQM  122 (269)
T ss_pred             HHHHHHHHHHHhhcCCCCCeeeEEeeE--------ccCCeEEEEEecCCCCcHHHHHHHHHhccCCCCHHHHHHHH-HHH
Confidence            3456788988865 7999999999975        4567889999999999887642            2344555 799


Q ss_pred             HHHHHHHhh-cC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHH
Q psy7174          95 LEGLQALKS-SM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        95 ~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      +.||.|||+ .+       |.|+       +|++|||.+.          ..++..|  ++||.+.+.. ++.++|+||+
T Consensus       123 ~~~l~~lh~~~~i~H~dl~~~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~--~~Pe~~~~~~-~~~~~Dv~sl  199 (269)
T cd08528         123 VLALRYLHKEKRIVHRDLTPNNIMLGEDDKVTITDFGLAKQKQPESKLTSVVGTILY--SCPEIVKNEP-YGEKADVWAF  199 (269)
T ss_pred             HHHHHHhccCCceeecCCCHHHEEECCCCcEEEecccceeecccccccccccCcccC--cChhhhcCCC-CchHHHHHHH
Confidence            999999996 44       4454       6999999753          3456678  9999998755 8999999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |+++|++++|++||...+.......+..
T Consensus       200 G~ll~~l~~g~~p~~~~~~~~~~~~~~~  227 (269)
T cd08528         200 GCILYQMCTLQPPFYSTNMLSLATKIVE  227 (269)
T ss_pred             HHHHHHHHhCCCcccccCHHHHHHHHhh
Confidence            9999999999999977655444444433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase 10 (Nek10) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek10 subfamily is one of a family of 11 different Neks (Nek1-11) that are involved in cell cycle control. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. No function has yet been ascribed to Nek10. The gene encoding Nek10 is a putative causative gene for breast cancer; it is located within a breast cancer susceptibility loci on chromosome 3p24.

>KOG1151|consensus

Probab=99.88  E-value=9.7e-23  Score=162.50  Aligned_cols=146  Identities=18%  Similarity=0.259  Sum_probs=116.0

Q ss_pred             cCCccccc--ccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-
Q psy7174          11 QSKWSPNT--PMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-   82 (188)
Q Consensus        11 ~~~~~~~~--~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-   82 (188)
                      .++|+++|  -+.+.     ..+..+++.||-+|.+.|+||-||++|++|       ..+....|-|+|||+|.+|+-+ 
T Consensus       487 EqRYvAvKIHqlNK~WrdEKKeNYhKHAcREyrIHKeLDHpRIVKlYDyf-------slDtdsFCTVLEYceGNDLDFYL  559 (775)
T KOG1151|consen  487 EQRYVAVKIHQLNKNWRDEKKENYHKHACREYRIHKELDHPRIVKLYDYF-------SLDTDSFCTVLEYCEGNDLDFYL  559 (775)
T ss_pred             hhheeeEeeehhccchhhHhhhhHHHHHHHHHhhhhccCcceeeeeeeee-------eeccccceeeeeecCCCchhHHH
Confidence            46777644  22222     233446788999999999999999999985       3667788999999999999876 


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHhhcC---------CCCeE----------EEecCCccc-----------------
Q psy7174          83 -------YSHLRYLENQQILEGLQALKSSM---------PALLK----------KFVGIGIGR-----------------  119 (188)
Q Consensus        83 -------~~~~~~~~~~qi~~gl~~lH~~~---------~~~il----------kl~dfg~~~-----------------  119 (188)
                             +.+.+.++ -||+.||.||....         |.|||          ||+|||++.                 
T Consensus       560 KQhklmSEKEARSIi-MQiVnAL~YLNEikpPIIHYDLKPgNILLv~GtacGeIKITDFGLSKIMdddSy~~vdGmeLTS  638 (775)
T KOG1151|consen  560 KQHKLMSEKEARSII-MQIVNALKYLNEIKPPIIHYDLKPGNILLVNGTACGEIKITDFGLSKIMDDDSYNSVDGMELTS  638 (775)
T ss_pred             HhhhhhhHHHHHHHH-HHHHHHHHHHhccCCCeeeeccCCccEEEecCcccceeEeeecchhhhccCCccCcccceeeec
Confidence                   33455566 49999999998876         77773          999999854                 


Q ss_pred             -ccccccccCCCCccccc---cCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFG---ARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~---~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                       ..||.||  ++||.+.-   .+..+.++||||+|||+|+.+.|+-||...
T Consensus       639 QgAGTYWY--LPPEcFvVgkePPKIsnKVDVWSvGVIFyQClYGrKPFGhn  687 (775)
T KOG1151|consen  639 QGAGTYWY--LPPECFVVGKEPPKISNKVDVWSVGVIFYQCLYGRKPFGHN  687 (775)
T ss_pred             ccCceeee--cCcceeecCCCCCccccceeeEeeehhhhhhhccCCCCCCc
Confidence             5689999  99999743   234789999999999999999999999643

>cd05074 PTKc_Tyro3 Catalytic domain of the Protein Tyrosine Kinase, Tyro3

Probab=99.88  E-value=2.4e-21  Score=149.65  Aligned_cols=145  Identities=14%  Similarity=0.194  Sum_probs=107.7

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------HHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------SHLRYLE   90 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------~~~~~~~   90 (188)
                      ....+++.+|++++++++||||+++++++.....  .......+++++|+.++++..+.              ..+..++
T Consensus        42 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~l~~~~~~~~~  119 (273)
T cd05074          42 SSDIEEFLREAACMKEFDHPNVIKLIGVSLRSRA--KGRLPIPMVILPFMKHGDLHTFLLMSRIGEEPFTLPLQTLVRFM  119 (273)
T ss_pred             hHHHHHHHHHHHHHhcCCCCCcceEEEEEccCCC--CCcccceEEEEecCCCCcHHHHHHHhcccCCCCCCCHHHHHHHH
Confidence            3445678899999999999999999997532100  00112347889999999986542              2345566


Q ss_pred             HHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-------------ccccccCCCCccccccCCCCch
Q psy7174          91 NQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-------------CTLYCTRGAPELLFGARMYGVG  143 (188)
Q Consensus        91 ~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-------------~~~~y~~~aPe~~~~~~~~~~~  143 (188)
                       .|++.||+|||+.+       |+|+       +|++|||++...             ++..|  ++||.+.... ++.+
T Consensus       120 -~~i~~~l~~lH~~~i~H~dikp~nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~-~~~~  195 (273)
T cd05074         120 -IDIASGMEYLSSKNFIHRDLAARNCMLNENMTVCVADFGLSKKIYSGDYYRQGCASKLPVKW--LALESLADNV-YTTH  195 (273)
T ss_pred             -HHHHHHHHHHHhCCEeecccchhhEEEcCCCCEEECcccccccccCCcceecCCCccCchhh--cCHhHHhcCc-cchh
Confidence             79999999999988       6666       599999986532             23457  8999887654 8899


Q ss_pred             hHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         144 IDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       144 ~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      +|+||+||++|++++ |++||.+.+..+....+
T Consensus       196 sDi~slG~il~el~~~g~~p~~~~~~~~~~~~~  228 (273)
T cd05074         196 SDVWAFGVTMWEIMTRGQTPYAGVENSEIYNYL  228 (273)
T ss_pred             hhhHHHHHHHHHHhhCCCCCCCCCCHHHHHHHH
Confidence            999999999999998 89999877665544444

Protein Tyrosine Kinase (PTK) family; Tyro3; catalytic (c) domain. The PTKc family is part of a larger superfamily that includes the catalytic domains of other kinases such as protein serine/threonine kinases, RIO kinases, and phosphoinositide 3-kinase (PI3K). PTKs catalyze the transfer of the gamma-phosphoryl group from ATP to tyrosine (tyr) residues in protein substrates. Tyro3 (or Sky) is a member of the Axl subfamily, which is composed of receptor tyr kinases (RTKs) containing an extracellular ligand-binding region with two immunoglobulin-like domains followed by two fibronectin type III repeats, a transmembrane segment, and an intracellular catalytic domain. Binding to their ligands, Gas6 and protein S, leads to receptor dimerization, autophosphorylation, activation, and intracellular signaling. Tyro3 is predominantly expressed in the central nervous system and the brain, and functions as a neurotrophic fac

>KOG0608|consensus

Probab=99.88  E-value=1.9e-22  Score=166.37  Aligned_cols=139  Identities=19%  Similarity=0.239  Sum_probs=115.5

Q ss_pred             ccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHH
Q psy7174          17 NTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSH   85 (188)
Q Consensus        17 ~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~   85 (188)
                      .|.+.|.   ..+...+.+.|..||...+++-||++|--        +++.+.+|+||||++||++-.+        ++-
T Consensus       659 mKTLrKaDVl~rnQvaHVKAERDILAEADn~WVVrLyyS--------FQDkdnLYFVMdYIPGGDmMSLLIrmgIFeE~L  730 (1034)
T KOG0608|consen  659 MKTLRKADVLMRNQVAHVKAERDILAEADNEWVVRLYYS--------FQDKDNLYFVMDYIPGGDMMSLLIRMGIFEEDL  730 (1034)
T ss_pred             HhhhHHHHHHhhhhhhhhhhhhhhHhhcCCcceEEEEEE--------eccCCceEEEEeccCCccHHHHHHHhccCHHHH
Confidence            4444443   33455667889999999999999999874        4888999999999999997664        344


Q ss_pred             HHHHHHHHHHHHHHHHhhcC-------CCCeE-------EEecCCccc--------------------------------
Q psy7174          86 LRYLENQQILEGLQALKSSM-------PALLK-------KFVGIGIGR--------------------------------  119 (188)
Q Consensus        86 ~~~~~~~qi~~gl~~lH~~~-------~~~il-------kl~dfg~~~--------------------------------  119 (188)
                      .++++ +++.-|+++.|..|       |+|||       ||+|||+.+                                
T Consensus       731 ARFYI-AEltcAiesVHkmGFIHRDiKPDNILIDrdGHIKLTDFGLCTGfRWTHdskYYq~gdH~RqDSmep~~e~~d~~  809 (1034)
T KOG0608|consen  731 ARFYI-AELTCAIESVHKMGFIHRDIKPDNILIDRDGHIKLTDFGLCTGFRWTHDSKYYQEGDHHRQDSMEPSPEWADIS  809 (1034)
T ss_pred             HHHHH-HHHHHHHHHHHhccceecccCccceEEccCCceeeeeccccccceeccccccccCCCccccccCCCchhhcccc
Confidence            56666 79999999999999       88884       999999611                                


Q ss_pred             ---------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 ---------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 ---------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                                           .+||+.|  +|||++.... |+..+|+||.|||||||+.|++||....
T Consensus       810 ~~lkvL~~ra~~~h~r~~ahslvgt~ny--iapevl~r~g-~~q~cdwws~gvil~em~~g~~pf~~~t  875 (1034)
T KOG0608|consen  810 KCLKVLERRAMRQHQRILAHSLVGTPNY--IAPEVLARTG-YTQLCDWWSVGVILYEMLVGQPPFLADT  875 (1034)
T ss_pred             ccchHHHHHHHhhhhhhhhhhhcCCCcc--cChHHhcccC-ccccchhhHhhHHHHHHhhCCCCccCCC
Confidence                                 5789999  9999998865 9999999999999999999999997554

>cd08215 STKc_Nek Catalytic domain of the Protein Serine/Threonine Kinase, Never In Mitosis gene A-related kinase

Probab=99.88  E-value=2.5e-21  Score=147.66  Aligned_cols=140  Identities=25%  Similarity=0.306  Sum_probs=111.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQ   93 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~q   93 (188)
                      ...+.+.+|+++++.++|||++++.+.+        ..+...++++|++.++++....            ..+..++ .|
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~~~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~i~-~~  111 (258)
T cd08215          41 KEREDALNEVKILKKLNHPNIIKYYESF--------EEKGKLCIVMEYADGGDLSQKIKKQKKEGKPFPEEQILDWF-VQ  111 (258)
T ss_pred             HHHHHHHHHHHHHHhcCCCChhheEEEE--------ecCCEEEEEEEecCCCcHHHHHHHhhccCCCcCHHHHHHHH-HH
Confidence            4566788999999999999999999975        3457889999999999987653            2344566 79


Q ss_pred             HHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          94 ILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        94 i~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ++.||.+||+.+       |+|+       ++++|||+..           ..++..|  +|||...... ++.++|+||
T Consensus       112 i~~~l~~lh~~~~~H~dl~~~nil~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y--~~pe~~~~~~-~~~~~Dv~s  188 (258)
T cd08215         112 LCLALKYLHSRKILHRDIKPQNIFLTSNGLVKLGDFGISKVLSSTVDLAKTVVGTPYY--LSPELCQNKP-YNYKSDIWS  188 (258)
T ss_pred             HHHHHHHHHhCCEecccCChHHeEEcCCCcEEECCccceeecccCcceecceeeeecc--cChhHhccCC-CCccccHHH
Confidence            999999999988       4444       6999999754           2356678  9999987755 889999999


Q ss_pred             HHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         149 VGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +|++++++++|..||...+..+....+.+
T Consensus       189 lG~~~~~l~~g~~p~~~~~~~~~~~~~~~  217 (258)
T cd08215         189 LGCVLYELCTLKHPFEGENLLELALKILK  217 (258)
T ss_pred             HHHHHHHHHcCCCCCCCCcHHHHHHHHhc
Confidence            99999999999999977765554444433

Serine/Threonine Kinases (STKs), Never In Mitosis gene A (NIMA)-related kinase (Nek) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Nek family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The Nek family is composed of 11 different mammalian members (Nek1-11) with similarity to the catalytic domain of Aspergillus nidulans NIMA kinase, the founding member of the Nek family which was identified in a screen for cell cycle mutants that were prevented from entering mitosis. Neks contain a conserved N-terminal catalytic domain and a more divergent C-terminal regulatory region of various sizes and structures. They

>cd06616 PKc_MKK4 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 4

Probab=99.88  E-value=1.5e-21  Score=152.02  Aligned_cols=152  Identities=14%  Similarity=0.150  Sum_probs=110.2

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||. .    ++..++|.+... .......+.+|+.++.++. ||||+++++++        ..+...++++|++...
T Consensus        17 ~g~vy~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~e~~~l~~~~~~~~iv~~~~~~--------~~~~~~~~~~e~~~~~   88 (288)
T cd06616          17 FGTVNKMLHKPSGTIMAVKRIRSTVDEKEQKRLLMDLDVVMRSSDCPYIVKFYGAL--------FREGDCWICMELMDIS   88 (288)
T ss_pred             ceEEEEEEECCCCCEEEEEEehhccChHHHHHHHHHHHHHHHhcCCCCEeeeeeEE--------ecCCcEEEEEecccCC
Confidence            677776 2    222233433322 2244567889999999996 99999999975        3456788999998653


Q ss_pred             c--HHHH----------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc----------c
Q psy7174          78 T--KARF----------YSHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR----------H  120 (188)
Q Consensus        78 ~--l~~~----------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~----------~  120 (188)
                      .  +...          +..+..++ .|++.||+|||+. +       |+|+       +|++|||++.          .
T Consensus        89 l~~l~~~~~~~~~~~l~~~~~~~i~-~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  167 (288)
T cd06616          89 LDKFYKYVYEVLKSVIPEEILGKIA-VATVKALNYLKEELKIIHRDVKPSNILLDRNGNIKLCDFGISGQLVDSIAKTRD  167 (288)
T ss_pred             HHHHHHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHhhcCCeeccCCCHHHEEEccCCcEEEeecchhHHhccCCccccc
Confidence            2  2111          23455666 7999999999975 5       4554       6999999754          2


Q ss_pred             cccccccCCCCcccccc--CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      .++..|  +|||.+.+.  ..++.++|+||+||++|++++|++||...+
T Consensus       168 ~~~~~y--~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~  214 (288)
T cd06616         168 AGCRPY--MAPERIDPSARDGYDVRSDVWSLGITLYEVATGKFPYPKWN  214 (288)
T ss_pred             cCccCc--cCHHHhccccccCCcchhhhhHHHHHHHHHHhCCCCchhcc
Confidence            456778  999998765  248899999999999999999999997654

Protein kinases (PKs), MAP kinase kinase 4 (MKK4) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK4 is a dual-specificity PK that phosphorylates and activates

>cd05613 STKc_MSK1_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase 1

Probab=99.88  E-value=2e-21  Score=151.65  Aligned_cols=130  Identities=12%  Similarity=0.185  Sum_probs=104.4

Q ss_pred             hhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ..+++.+|+++++++ +|+||+++++++        ..+...++++||++++++..+        ...+..++ .|+++|
T Consensus        47 ~~~~~~~e~~~l~~l~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~~~-~qi~~a  117 (290)
T cd05613          47 TTEHTRTERQVLEHIRQSPFLVTLHYAF--------QTDTKLHLILDYINGGELFTHLSQRERFKEQEVQIYS-GEIVLA  117 (290)
T ss_pred             HHHHHHHHHHHHHhcccCCChhceeeEe--------ecCCeEEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHH
Confidence            346678899999999 499999999875        445678999999999998775        33455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc------------ccccccccCCCCcccccc-CCCCchhHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLYCTRGAPELLFGA-RMYGVGIDMWAVG  150 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~y~~~aPe~~~~~-~~~~~~~DiwslG  150 (188)
                      |.|||+.+       |+|+       +|++|||++.            ..++..|  +|||.+... ..++.++|+||+|
T Consensus       118 l~~lH~~~i~H~dl~p~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~Dv~slG  195 (290)
T cd05613         118 LEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFHEDEVERAYSFCGTIEY--MAPDIVRGGDGGHDKAVDWWSMG  195 (290)
T ss_pred             HHHHHhCCeeccCCCHHHeEECCCCCEEEeeCccceecccccccccccccCCccc--CChhhccCCCCCCCccccHHHHH
Confidence            99999988       4444       6999999753            2356789  999998653 2367899999999


Q ss_pred             HHHHHHHhCCCCCCCCC
Q psy7174         151 CIICELLLKAPFLPGES  167 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~  167 (188)
                      +++|++++|..||...+
T Consensus       196 ~~l~~ll~g~~p~~~~~  212 (290)
T cd05613         196 VLMYELLTGASPFTVDG  212 (290)
T ss_pred             HHHHHHhcCCCCCCcCC
Confidence            99999999999996543

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK1, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydroph

>KOG0200|consensus

Probab=99.88  E-value=9.8e-22  Score=167.72  Aligned_cols=159  Identities=18%  Similarity=0.245  Sum_probs=122.7

Q ss_pred             ccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHH-------
Q psy7174          17 NTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLR-------   87 (188)
Q Consensus        17 ~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~-------   87 (188)
                      +|.++.. ...+.+.+..|+++|+.+. |+||+.++|+|.        .+...++++||+..|+|..+....+       
T Consensus       333 VK~~k~~~~~~~~~~~~~El~~m~~~g~H~niv~llG~~t--------~~~~~~~v~Ey~~~G~L~~~Lr~~r~~~~~~~  404 (609)
T KOG0200|consen  333 VKMLKENASSSEKKDLMSELNVLKELGKHPNIVNLLGACT--------QDGPLYVIVEYAEHGDLLEFLRKKRVTESIDG  404 (609)
T ss_pred             EEecccccCcHHHHHHHHHHHHHHHhcCCcchhhheeeec--------cCCceEEEEEeccCCcHHHHHHhccccccccc
Confidence            3433333 3456778899999999885 999999999872        2678899999999999988754444       


Q ss_pred             -----------------HHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCcccc---------ccc----
Q psy7174          88 -----------------YLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRH---------VCT----  123 (188)
Q Consensus        88 -----------------~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~---------~~~----  123 (188)
                                       .+. .||+.|++||++..              .+.++||+|||+++.         .++    
T Consensus       405 ~~~~~~~~~~L~~~dLlsfa-~QIa~GMe~L~~~~~vHRDLAaRNVLi~~~~~~kIaDFGlar~~~~~~~y~~~~~~~~L  483 (609)
T KOG0200|consen  405 SGVFPNERDALTTKDLLSFA-YQIANGMEYLASVPCVHRDLAARNVLITKNKVIKIADFGLARDHYNKDYYRTKSSAGTL  483 (609)
T ss_pred             cCCCccccCCcCHHHHHHHH-HHHHHHHHHHhhCCccchhhhhhhEEecCCCEEEEccccceeccCCCCceEecCCCCcc
Confidence                             344 79999999999987              445579999999762         111    


Q ss_pred             -ccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC-hHHHHHHHHhhcCCCCCCCC
Q psy7174         124 -LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGES-DLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       124 -~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~-~~~~~~~i~~~~~~p~~~~~  187 (188)
                       ..+  ||||.+.... |+.++||||+|+++||+++ |..||.+.. ..+..+.+-++.+..-|+-|
T Consensus       484 P~kW--mApEsl~~~~-ft~kSDVWSfGI~L~EifsLG~~PYp~~~~~~~l~~~l~~G~r~~~P~~c  547 (609)
T KOG0200|consen  484 PVKW--MAPESLFDRV-FTSKSDVWSFGILLWEIFTLGGTPYPGIPPTEELLEFLKEGNRMEQPEHC  547 (609)
T ss_pred             ceee--cCHHHhccCc-ccccchhhHHHHHHHHHhhCCCCCCCCCCcHHHHHHHHhcCCCCCCCCCC
Confidence             235  8999998854 9999999999999999996 899999865 55556666666666666544

>KOG1025|consensus

Probab=99.88  E-value=1.2e-22  Score=171.26  Aligned_cols=172  Identities=15%  Similarity=0.131  Sum_probs=128.9

Q ss_pred             ccccccc------cCCccccccccc----cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           4 VCFKPFQ------QSKWSPNTPMAR----CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         4 ~~g~v~~------~~~~~~~~~i~~----~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      .||.||+      ..+.++-++||-    -+.+...+++.|+-+|.+++|||+++++++|..         ....+++++
T Consensus       708 AfGtV~kGiw~Pege~vKipVaiKvl~~~t~~~~s~e~LdeAl~masldHpnl~RLLgvc~~---------s~~qlvtq~  778 (1177)
T KOG1025|consen  708 AFGTVYKGIWIPEGENVKIPVAIKVLIEFTSPKASIELLDEALRMASLDHPNLLRLLGVCML---------STLQLVTQL  778 (1177)
T ss_pred             cceeEEeeeEecCCceecceeEEEEeeccCCchhhHHHHHHHHHHhcCCCchHHHHhhhccc---------chHHHHHHh
Confidence            4788887      223333444443    255667889999999999999999999999733         238899999


Q ss_pred             cccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCccccccc-------
Q psy7174          74 FTKTTKARFY---------SHLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHVCT-------  123 (188)
Q Consensus        74 ~~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~~~~-------  123 (188)
                      ++.|.|.++.         +.+..+. .||++||.|||.++              ..+.+|+.|||++.....       
T Consensus       779 mP~G~LlDyvr~hr~~igsq~lLnw~-~QIAkgM~YLe~qrlVHrdLaaRNVLVksP~hvkitdfgla~ll~~d~~ey~~  857 (1177)
T KOG1025|consen  779 MPLGCLLDYVREHRDNIGSQDLLNWC-YQIAKGMKYLEEQRLVHRDLAARNVLVKSPNHVKITDFGLAKLLAPDEKEYSA  857 (1177)
T ss_pred             cccchHHHHHHHhhccccHHHHHHHH-HHHHHHHHHHHhcchhhhhhhhhheeecCCCeEEEEecchhhccCcccccccc
Confidence            9999999872         2344444 59999999999987              223469999998763321       


Q ss_pred             ------ccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 ------LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ------~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                            ..+  +|-|.+...+ |++++||||+||++||++| |..|+.+....++-..+...-+.+.|..||
T Consensus       858 ~~gK~pikw--male~i~~~~-~thqSDVWsfGVtiWElmTFGa~Py~gi~~~eI~dlle~geRLsqPpiCt  926 (1177)
T KOG1025|consen  858 PGGKVPIKW--MALESIRIRK-YTHQSDVWSFGVTIWELMTFGAKPYDGIPAEEIPDLLEKGERLSQPPICT  926 (1177)
T ss_pred             cccccCcHH--HHHHHhhccC-CCchhhhhhhhhhHHHHHhcCCCccCCCCHHHhhHHHhccccCCCCCCcc
Confidence                  123  4556665544 9999999999999999997 999999998877776666666677776654

>cd06626 STKc_MEKK4 Catalytic domain of the Protein Serine/Threonine Kinase, MAP/ERK kinase kinase 4

Probab=99.87  E-value=4.3e-21  Score=147.33  Aligned_cols=130  Identities=24%  Similarity=0.338  Sum_probs=106.3

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      +..+.+.+|++++++++|+||+++++.+        .+....++++||+.++++.++.        ..+..++ .|++.|
T Consensus        41 ~~~~~~~~e~~~~~~l~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~i~-~~i~~~  111 (264)
T cd06626          41 KTIKEIADEMKVLELLKHPNLVKYYGVE--------VHREKVYIFMEYCSGGTLEELLEHGRILDEHVIRVYT-LQLLEG  111 (264)
T ss_pred             HHHHHHHHHHHHHHhCCCCChhheeeeE--------ecCCEEEEEEecCCCCcHHHHHhhcCCCChHHHHHHH-HHHHHH
Confidence            3667889999999999999999999964        4566789999999999998762        3455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccc---------------cccccccCCCCccccccC--CCCchhHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRH---------------VCTLYCTRGAPELLFGAR--MYGVGIDM  146 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~---------------~~~~~y~~~aPe~~~~~~--~~~~~~Di  146 (188)
                      |.|||+.+       ++|+       +|++|||++..               .++..|  +|||.+....  .++.++|+
T Consensus       112 l~~lh~~~i~H~dl~~~nil~~~~~~~kl~d~g~~~~~~~~~~~~~~~~~~~~~~~~~--~~PE~~~~~~~~~~~~~~Dv  189 (264)
T cd06626         112 LAYLHSHGIVHRDIKPANIFLDHNGVIKLGDFGCAVKLKNNTTTMGEEVQSLAGTPAY--MAPEVITGGKGKGHGRAADI  189 (264)
T ss_pred             HHHHHHCCcccCCCCHHHEEECCCCCEEEcccccccccCCCCCcccccccCCcCCcCc--cChhhccCCCCCCCCcccch
Confidence            99999988       4444       69999997542               245678  9999986532  26889999


Q ss_pred             HHHHHHHHHHHhCCCCCCCC
Q psy7174         147 WAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       147 wslG~il~el~~g~~pf~~~  166 (188)
                      ||+|++++++++|+.||.+.
T Consensus       190 ~s~G~il~~l~~g~~pf~~~  209 (264)
T cd06626         190 WSLGCVVLEMATGKRPWSEL  209 (264)
T ss_pred             HHHHHHHHHHHhCCCCccCC
Confidence            99999999999999999765

Serine/threonine kinases (STKs), MAP/ERK kinase kinase 4 (MEKK4) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MEKK4 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MEKK4 is a mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK or MKKK or MAP3K), that phosphorylates and activates MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. MEKK4 activates the c-Jun N-terminal kinase (JNK) and p38 MAPK signaling pathways by directly activating their respective MAPKKs, MKK4

>cd05122 PKc_STE Catalytic domain of STE family Protein Kinases

Probab=99.87  E-value=3.2e-21  Score=146.41  Aligned_cols=152  Identities=21%  Similarity=0.299  Sum_probs=116.9

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|.+|+ ..    +..++|.+........+.+.+|++++++++|+|++++.+++        ..+...++++||++++++
T Consensus        13 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~l~~e~~~~~~L   84 (253)
T cd05122          13 FGEVYKARHKRTGKEVAIKVIKLESKEKKEKIINEIQILKKCKHPNIVKYYGSY--------LKKDELWIVMEFCSGGSL   84 (253)
T ss_pred             ceEEEEEEECCCCcEEEEEEecccchhHHHHHHHHHHHHHhCCCCCEeEEEEEE--------ecCCeEEEEEecCCCCcH
Confidence            677777 22    22223333333334667899999999999999999999975        345678999999999998


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc----------cccccc
Q psy7174          80 ARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH----------VCTLYC  126 (188)
Q Consensus        80 ~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~----------~~~~~y  126 (188)
                      ..+.         ..+..++ .|+++||.+||+.+       |.|+       ++|+|||.+..          .++..|
T Consensus        85 ~~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lh~~~i~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  163 (253)
T cd05122          85 KDLLKSTNQTLTESQIAYVC-KELLKGLEYLHSNGIIHRDIKAANILLTSDGEVKLIDFGLSAQLSDTKARNTMVGTPYW  163 (253)
T ss_pred             HHHHhhcCCCCCHHHHHHHH-HHHHHHHHHhhcCCEecCCCCHHHEEEccCCeEEEeeccccccccccccccceecCCcc
Confidence            8752         3455566 79999999999988       5554       69999997542          345678


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                        ++||.+.... ++.++|+||+|++++++++|+.||...+.
T Consensus       164 --~~PE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~~~  202 (253)
T cd05122         164 --MAPEVINGKP-YDYKADIWSLGITAIELAEGKPPYSELPP  202 (253)
T ss_pred             --cCHHHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCch
Confidence              9999987755 88999999999999999999999976643

Protein Kinases (PKs), STE family, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The STE family is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases (STKs), protein tyrosine kinases (PTKs), RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). This family is composed of STKs, and some dual-specificity PKs that phosphorylate both threonine and tyrosine residues of target proteins. Most members are kinases involved in mitogen-activated protein kinase (MAPK) signaling cascades, acting as MAPK kinases (MAPKKs), MAPK kinase kinases (MAPKKKs), or MAPK kinase kinase kinases (MAP4Ks). The MAPK signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core

>cd05123 STKc_AGC Catalytic domain of AGC family Protein Serine/Threonine Kinases

Probab=99.87  E-value=2e-21  Score=148.00  Aligned_cols=161  Identities=19%  Similarity=0.266  Sum_probs=121.8

Q ss_pred             cccccc-c----CCccccccccccc---hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD---VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~---~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      +|.+|. .    ++..++|.+.+..   ......+.+|++++++++||||+++++.+        ..+...++++|++.+
T Consensus         6 ~~~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~   77 (250)
T cd05123           6 FGKVLLVRKKDTGKLYAMKVLKKKKIIKRKEVEHTLTERNILSRINHPFIVKLHYAF--------QTEEKLYLVLEYAPG   77 (250)
T ss_pred             ceEEEEEEECCCCcEEEEEEeehhhhcchHHHHHHHHHHHHHHHcCCCcHHHHHHHe--------ecCCeeEEEEecCCC
Confidence            567776 1    2223344444321   22456788999999999999999999864        457788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++..+        ...+..++ .|+++||.|||+.+       |+|+       ++++|||++.           ..++
T Consensus        78 ~~L~~~l~~~~~l~~~~~~~~~-~qi~~~l~~lh~~~~~H~~l~p~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  156 (250)
T cd05123          78 GELFSHLSKEGRFSEERARFYA-AEIVLALEYLHSLGIIYRDLKPENILLDADGHIKLTDFGLAKELSSEGSRTNTFCGT  156 (250)
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCceecCCCcceEEEcCCCcEEEeecCcceecccCCCcccCCcCC
Confidence            998775        23455566 79999999999987       5555       5999999754           2346


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ..|  ++||...+.. .+.++|+||+|+++|++++|+.||...+.......+.+
T Consensus       157 ~~~--~~Pe~~~~~~-~~~~~D~~slG~~~~~l~~g~~p~~~~~~~~~~~~~~~  207 (250)
T cd05123         157 PEY--LAPEVLLGKG-YGKAVDWWSLGVLLYEMLTGKPPFYAEDRKEIYEKILK  207 (250)
T ss_pred             ccc--cChHHhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHhc
Confidence            678  9999987755 78899999999999999999999977765554544443

Serine/Threonine Kinases (STKs), AGC (Protein Kinases A, G and C) family, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The AGC family is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and Phosphoinositide 3-Kinase (PI3K). Members of this family include cAMP-dependent Protein Kinase (PKA), cGMP-dependent Protein Kinase (PKG), Protein Kinase C (PKC), Protein Kinase B (PKB), G protein-coupled Receptor Kinase (GRK), Serum- and Glucocorticoid-induced Kinase (SGK), and 70 kDa ribosomal Protein S6 Kinase (p70S6K or S6K), among others. AGC kinases share an activation mechanism based on the phosphorylation of up to three sites: the activation loop (A-loop), the hydrophobic motif (HM) and the

>cd06627 STKc_Cdc7_like Catalytic domain of Cell division control protein 7-like Protein Serine/Threonine Kinases

Probab=99.87  E-value=4.4e-21  Score=146.27  Aligned_cols=137  Identities=24%  Similarity=0.327  Sum_probs=110.2

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|++++++++|||++++++++        .++...++++|++.++++..+.        ..+..++ .|++.|
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~~~~~~~~~l~~~~~~~~~-~~i~~~  111 (254)
T cd06627          41 EALKSIMQEIDLLKNLKHPNIVKYIGSI--------ETSDSLYIILEYAENGSLRQIIKKFGPFPESLVAVYV-YQVLQG  111 (254)
T ss_pred             HHHHHHHHHHHHHHhCCCCCccEEEEEE--------EeCCEEEEEEecCCCCcHHHHHHhccCCCHHHHHHHH-HHHHHH
Confidence            4557789999999999999999999975        3456789999999999988752        3345566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      |.+||+.+       |.|+       ++++|||++.           ..++..|  +|||...... ++.++|+||+|++
T Consensus       112 l~~lH~~~i~H~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~y--~~pe~~~~~~-~~~~~Dv~~lG~~  188 (254)
T cd06627         112 LAYLHEQGVIHRDIKAANILTTKDGVVKLADFGVATKLNDVSKDDASVVGTPYW--MAPEVIEMSG-ASTASDIWSLGCT  188 (254)
T ss_pred             HHHHhhCCcccCCCCHHHEEECCCCCEEEeccccceecCCCcccccccccchhh--cCHhhhcCCC-CCcchhHHHHHHH
Confidence            99999998       4444       6999999754           2456678  9999987655 7899999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHH
Q psy7174         153 ICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~  174 (188)
                      ++++++|..||...+.......
T Consensus       189 l~~l~~g~~p~~~~~~~~~~~~  210 (254)
T cd06627         189 VIELLTGNPPYYDLNPMAALFR  210 (254)
T ss_pred             HHHHHhCCCCCCCccHHHHHHH
Confidence            9999999999976655443333

Serine/threonine kinases (STKs), (Cdc7)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The Cdc7-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily include Schizosaccharomyces pombe Cdc7, Saccharomyces cerevisiae Cdc15, Arabidopsis thaliana mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) epsilon, and related proteins. MAPKKKs phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. Fission yeast

>cd06617 PKc_MKK3_6 Catalytic domain of the dual-specificity Protein Kinases, MAP kinase kinases 3 and 6

Probab=99.87  E-value=3.4e-21  Score=149.54  Aligned_cols=149  Identities=15%  Similarity=0.189  Sum_probs=107.1

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHH-HHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQ-DRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~i-l~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.++.. ..+...++.+|+.+ ++.++||||+++++++        ..+...++++||+.+ 
T Consensus        14 ~g~v~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~iv~~~~~~--------~~~~~~~lv~e~~~~-   84 (283)
T cd06617          14 YGVVDKMRHVPTGTIMAVKRIRATVNSQEQKRLLMDLDISMRSVDCPYTVTFYGAL--------FREGDVWICMEVMDT-   84 (283)
T ss_pred             CeEEEEEEEcCCCcEEEEEEEecCCCcHHHHHHHHHHHHHHHHcCCCCeeeeeEEE--------ecCCcEEEEhhhhcc-
Confidence            678887 2    233334444332 22334556667775 5667899999999976        345678999999974 


Q ss_pred             cHHHH------------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc----------c
Q psy7174          78 TKARF------------YSHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR----------H  120 (188)
Q Consensus        78 ~l~~~------------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~----------~  120 (188)
                      ++..+            +..+..++ .|++.||.|||++ +       |+|+       +||+|||++.          .
T Consensus        85 ~l~~~l~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~~i~h~dlkp~nil~~~~~~~kl~dfg~~~~~~~~~~~~~~  163 (283)
T cd06617          85 SLDKFYKKVYDKGLTIPEDILGKIA-VSIVKALEYLHSKLSVIHRDVKPSNVLINRNGQVKLCDFGISGYLVDSVAKTID  163 (283)
T ss_pred             cHHHHHHHhccCCCCCCHHHHHHHH-HHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccc
Confidence            44332            23455566 7999999999987 5       4444       6999999754          3


Q ss_pred             cccccccCCCCcccccc---CCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      .++..|  +|||.+.+.   ..++.++|+||+||++|+|++|+.||..
T Consensus       164 ~~~~~y--~aPE~~~~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~  209 (283)
T cd06617         164 AGCKPY--MAPERINPELNQKGYDVKSDVWSLGITMIELATGRFPYDS  209 (283)
T ss_pred             cCCccc--cChhhcCCcccccccCccccchhhHHHHHHHHhCCCCCCc
Confidence            456779  999988542   2368899999999999999999999964

Protein kinases (PKs), MAP kinase kinase 3 (MKK3) and MKK6 subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK3 and MKK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK3 and MKK6 are dual-specificity PKs

>cd05576 STKc_RPK118_like Catalytic domain of the Protein Serine/Threonine Kinases, RPK118 and similar proteins

Probab=99.87  E-value=1.8e-21  Score=148.07  Aligned_cols=148  Identities=14%  Similarity=0.084  Sum_probs=108.1

Q ss_pred             cccccccc-cCCcc-ccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           3 EVCFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         3 ~~~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      -++|+||. .++.. ..+++|+....  ....+|...+....||||+++++++        .+....++++||+.+++|.
T Consensus         4 g~~~~v~~~~~~~~~~~~~~K~i~~~--~~~~~~~~~~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   73 (237)
T cd05576           4 GVIDKVLLVMDTRTQQTFILKGLRKS--SEYSRERLTIIPHCVPNMVCLHKYI--------VSEDSVFLVLQHAEGGKLW   73 (237)
T ss_pred             cccceEEEEEEccCCcEEEEEeecch--hhhhhHHHHHHhcCCCceeehhhhe--------ecCCeEEEEEecCCCCCHH
Confidence            35778887 22222 23444443111  2344566666667799999999975        4457889999999999987


Q ss_pred             HH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCCC
Q psy7174          81 RF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRGA  130 (188)
Q Consensus        81 ~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~a  130 (188)
                      ..        ...+..++ .|+++||+|||+.+       |+|+       ++++|||...        ..++..|  +|
T Consensus        74 ~~l~~~~~l~~~~~~~~~-~ql~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~df~~~~~~~~~~~~~~~~~~y--~a  150 (237)
T cd05576          74 SHISKFLNIPEECVKRWA-AEMVVALDALHREGIVCRDLNPNNILLDDRGHIQLTYFSRWSEVEDSCDGEAVENMY--CA  150 (237)
T ss_pred             HHHHHhcCCCHHHHHHHH-HHHHHHHHHHHhCCeeccCCCHHHEEEcCCCCEEEecccchhccccccccCCcCccc--cC
Confidence            64        23455666 79999999999988       5555       5999999643        3345678  99


Q ss_pred             CccccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       131 Pe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      ||...... ++.++|+||+|+++|++++|+.|+.
T Consensus       151 PE~~~~~~-~~~~~DvwslG~il~el~~g~~~~~  183 (237)
T cd05576         151 PEVGGISE-ETEACDWWSLGAILFELLTGKTLVE  183 (237)
T ss_pred             CcccCCCC-CCchhhHHHHHHHHHHHHHCcchhh
Confidence            99987654 8899999999999999999987764

Serine/Threonine Kinases (STKs), RPK118-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The RPK118-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily show similarity to human RPK118, which contains an N-terminal Phox homology (PX) domain, a Microtubule Interacting and Trafficking (MIT) domain, and a kinase domain containing a long insert. Also included in the family is human RPK60 (or ribosomal protein S6 kinase-like 1), which also contains MIT and kinase domains but lacks a PX domain. RPK118 binds sphingosine kinase, a key enzyme in the synthesis of sphingosine 1-phospha

>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional

Probab=99.86  E-value=2.4e-21  Score=173.36  Aligned_cols=146  Identities=15%  Similarity=0.146  Sum_probs=106.3

Q ss_pred             cccccc-cCCcc-ccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+ ..+.. ..+++|+.... .....+|++++++++||||++++++|        .++...++||||+++|++.++
T Consensus       703 ~g~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~~l~~l~HpnIv~~~~~~--------~~~~~~~lv~Ey~~~g~L~~~  773 (968)
T PLN00113        703 KGASYKGKSIKNGMQFVVKEINDV-NSIPSSEIADMGKLQHPNIVKLIGLC--------RSEKGAYLIHEYIEGKNLSEV  773 (968)
T ss_pred             CeeEEEEEECCCCcEEEEEEccCC-ccccHHHHHHHhhCCCCCcceEEEEE--------EcCCCCEEEEeCCCCCcHHHH
Confidence            677887 22222 24445543211 12234678999999999999999987        345678999999999999886


Q ss_pred             H-----HHHHHHHHHHHHHHHHHHhhc---C-------CCCeE-------EEecCCcc-------cccccccccCCCCcc
Q psy7174          83 Y-----SHLRYLENQQILEGLQALKSS---M-------PALLK-------KFVGIGIG-------RHVCTLYCTRGAPEL  133 (188)
Q Consensus        83 ~-----~~~~~~~~~qi~~gl~~lH~~---~-------~~~il-------kl~dfg~~-------~~~~~~~y~~~aPe~  133 (188)
                      .     .....++ .|+++||+|||..   +       |+|++       ++. +|..       ...++..|  +|||+
T Consensus       774 l~~l~~~~~~~i~-~~ia~~L~yLH~~~~~~iiH~dlkp~Nil~~~~~~~~~~-~~~~~~~~~~~~~~~t~~y--~aPE~  849 (968)
T PLN00113        774 LRNLSWERRRKIA-IGIAKALRFLHCRCSPAVVVGNLSPEKIIIDGKDEPHLR-LSLPGLLCTDTKCFISSAY--VAPET  849 (968)
T ss_pred             HhcCCHHHHHHHH-HHHHHHHHHhccCCCCCeecCCCCHHhEEECCCCceEEE-eccccccccCCCccccccc--cCccc
Confidence            3     3445566 7999999999954   3       55653       222 3332       23466889  99999


Q ss_pred             ccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         134 LFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       134 ~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      +.+.. ++.++||||+||++|||++|+.||.
T Consensus       850 ~~~~~-~~~~sDv~S~Gvvl~el~tg~~p~~  879 (968)
T PLN00113        850 RETKD-ITEKSDIYGFGLILIELLTGKSPAD  879 (968)
T ss_pred             ccCCC-CCcccchhhHHHHHHHHHhCCCCCC
Confidence            98755 9999999999999999999999984

>cd06606 STKc_MAPKKK Catalytic domain of the Protein Serine/Threonine Kinase, Mitogen-Activated Protein Kinase Kinase Kinase

Probab=99.86  E-value=1.5e-20  Score=143.25  Aligned_cols=132  Identities=24%  Similarity=0.353  Sum_probs=106.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|++++++++||||+++++.+..      ......++++|++.++++..+.        ..+..++ .|++.|
T Consensus        41 ~~~~~~~~e~~~l~~l~~~~i~~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~~l~~~  113 (260)
T cd06606          41 EELEALEREIRILSSLQHPNIVRYYGSERD------EEKNTLNIFLEYVSGGSLSSLLKKFGKLPEPVIRKYT-RQILEG  113 (260)
T ss_pred             HHHHHHHHHHHHHHHcCCCCEeeEEEEEec------CCCCeEEEEEEecCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHH
Confidence            446778999999999999999999997521      1126789999999999988763        3345566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc-------------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      |.|||+.+       |+|+       +|++|||.+.             ..++..|  .+||.+.... .+.++|+||+|
T Consensus       114 l~~lh~~~~~h~dl~p~ni~i~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~~y--~~pE~~~~~~-~~~~~Dv~slG  190 (260)
T cd06606         114 LAYLHSNGIVHRDIKGANILVDSDGVVKLADFGCAKRLGDIETGEGTGSVRGTPYW--MAPEVIRGEE-YGRAADIWSLG  190 (260)
T ss_pred             HHHHHHCCccccCCCHHHEEEcCCCCEEEcccccEEecccccccccccCCCCCccc--cCHhhhcCCC-CCchhhHHHHH
Confidence            99999988       3343       6999999644             2345578  8999987755 88999999999


Q ss_pred             HHHHHHHhCCCCCCCCC
Q psy7174         151 CIICELLLKAPFLPGES  167 (188)
Q Consensus       151 ~il~el~~g~~pf~~~~  167 (188)
                      ++++++++|..||...+
T Consensus       191 ~il~~l~~g~~p~~~~~  207 (260)
T cd06606         191 CTVIEMATGKPPWSELG  207 (260)
T ss_pred             HHHHHHHhCCCCCCCCC
Confidence            99999999999997654

Serine/threonine kinases (STKs), mitogen-activated protein kinase (MAPK) kinase kinase (MAPKKK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAPKKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKKKs (MKKKs or MAP3Ks) are also called MAP/ERK kinase kinases (MEKKs) in some cases. They phosphorylate and activate MAPK kinases (MAPKKs or MKKs or MAP2Ks), which in turn phosphorylate and activate MAPKs during signaling cascades that are important in mediating cellular responses to extracellular signals. This subfamily is composed of the Apoptosis Signal-regulating Kinases ASK1 (or MAPKK

>KOG0983|consensus

Probab=99.86  E-value=6.7e-22  Score=149.17  Aligned_cols=162  Identities=19%  Similarity=0.292  Sum_probs=120.2

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|.|++ .    ++..++|...+. ..++.+++++.++++.+.+ .|+||+-+|+|+        .+...++.||.+. .
T Consensus       105 cG~V~k~~~rs~~~iiAVK~M~rt~Nkee~kRILmDldvv~~s~dcpyIV~c~GyFi--------~n~dV~IcMelMs-~  175 (391)
T KOG0983|consen  105 CGQVWKMRFRSTGHIIAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVQCFGYFI--------TNTDVFICMELMS-T  175 (391)
T ss_pred             ccceEEEEEcccceEEEEEeecccCCHHHHHHHHHhhhHHhhccCCCeeeeeeeEEe--------eCchHHHHHHHHH-H
Confidence            678887 2    223335544453 4556678888888877765 899999999874        4667888888764 2


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhcC--------CCCeE-------EEecCCcc----------ccccc
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSSM--------PALLK-------KFVGIGIG----------RHVCT  123 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~--------~~~il-------kl~dfg~~----------~~~~~  123 (188)
                      .+.++         +..+..+. .-+++||.||..+.        |+|||       |+||||.+          +..|+
T Consensus       176 C~ekLlkrik~piPE~ilGk~t-va~v~AL~YLKeKH~viHRDvKPSNILlDe~GniKlCDFGIsGrlvdSkAhtrsAGC  254 (391)
T KOG0983|consen  176 CAEKLLKRIKGPIPERILGKMT-VAIVKALYYLKEKHGVIHRDVKPSNILLDERGNIKLCDFGISGRLVDSKAHTRSAGC  254 (391)
T ss_pred             HHHHHHHHhcCCchHHhhhhhH-HHHHHHHHHHHHhcceeecccCccceEEccCCCEEeecccccceeecccccccccCC
Confidence            33332         22333444 57889999997765        88884       99999974          35689


Q ss_pred             ccccCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhh
Q psy7174         124 LYCTRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~  178 (188)
                      +.|  ||||.+..  .+.|+..+||||||++++|++||+.||.+. .+.+++.+|+..
T Consensus       255 ~~Y--MaPERidp~~~~kYDiRaDVWSlGITlveLaTg~yPy~~c~tdFe~ltkvln~  310 (391)
T KOG0983|consen  255 AAY--MAPERIDPPDKPKYDIRADVWSLGITLVELATGQYPYKGCKTDFEVLTKVLNE  310 (391)
T ss_pred             ccc--cCccccCCCCCCccchhhhhhhhccchhhhhcccCCCCCCCccHHHHHHHHhc
Confidence            999  99999853  345999999999999999999999999984 467778888763

>cd05581 STKc_PDK1 Catalytic domain of the Protein Serine/Threonine Kinase, Phosphoinositide-dependent kinase 1

Probab=99.86  E-value=7.4e-21  Score=147.09  Aligned_cols=139  Identities=25%  Similarity=0.360  Sum_probs=111.5

Q ss_pred             hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|.+++++++ ||||+++++++        .++...+++||++.++++..+.        ..+..++ .|++.
T Consensus        43 ~~~~~~~~e~~~~~~l~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~l~~~~~~~i~-~ql~~  113 (280)
T cd05581          43 KKVKYVKIEKEVLTRLNGHPGIIKLYYTF--------QDEENLYFVLEYAPNGELLQYIRKYGSLDEKCTRFYA-AEILL  113 (280)
T ss_pred             HHHHHHHHHHHHHHhcccCCCchhHHHHh--------cCCceEEEEEcCCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHH
Confidence            33466889999999999 99999999975        4566889999999999998752        3456666 89999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCcccc-------------------------------cccccccCCCC
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRH-------------------------------VCTLYCTRGAP  131 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------------------------~~~~~y~~~aP  131 (188)
                      ||.+||+.+       |+|+       ++++|||+...                               .++..|  +||
T Consensus       114 ~l~~Lh~~~~~H~dl~~~ni~i~~~~~~~l~df~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~P  191 (280)
T cd05581         114 ALEYLHSKGIIHRDLKPENILLDKDMHIKITDFGTAKVLDPNSSPESNKGDATNIDSQIEKNRRRFASFVGTAEY--VSP  191 (280)
T ss_pred             HHHHHHHCCeeecCCCHHHeEECCCCCEEecCCccccccCCccccccCCCCCccccccccccccccccccCCccc--cCH
Confidence            999999988       3343       69999997442                               235678  899


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |...... .+.++|+||+|++++++++|+.||...+....+..+.
T Consensus       192 e~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  235 (280)
T cd05581         192 ELLNEKP-AGKSSDLWALGCIIYQMLTGKPPFRGSNEYLTFQKIL  235 (280)
T ss_pred             HHhCCCC-CChhhhHHHHHHHHHHHHhCCCCCCCccHHHHHHHHH
Confidence            9987654 8899999999999999999999998776555555444

Serine/Threonine Kinases (STKs), Phosphoinositide-dependent kinase 1 (PDK1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PDK1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). PDK1 carries an N-terminal catalytic domain and a C-terminal pleckstrin homology (PH) domain that binds phosphoinositides. It phosphorylates the activation loop of AGC kinases that are regulated by PI3K such as PKB, SGK, and PKC, among others, and is crucial for their activation. Thus, it contributes in regulating many processes including metabolism, growth, proliferation, and survival. PDK1 also has the ability to auto

>KOG0603|consensus

Probab=99.85  E-value=3.8e-21  Score=158.42  Aligned_cols=129  Identities=18%  Similarity=0.239  Sum_probs=105.2

Q ss_pred             hHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~~  100 (188)
                      .+..+|+.++.+. +||||+++++.+        .++.+.|+|||.+.++.+.+-       ...+..++ +|++.|+.|
T Consensus       360 ~~~~~e~~~~~~~~~h~niv~~~~v~--------~~~~~~~~v~e~l~g~ell~ri~~~~~~~~e~~~w~-~~lv~Av~~  430 (612)
T KOG0603|consen  360 DDNQDEIPISLLVRDHPNIVKSHDVY--------EDGKEIYLVMELLDGGELLRRIRSKPEFCSEASQWA-AELVSAVDY  430 (612)
T ss_pred             cccccccchhhhhcCCCcceeeccee--------cCCceeeeeehhccccHHHHHHHhcchhHHHHHHHH-HHHHHHHHH
Confidence            3466788887776 499999999976        567889999999998887652       23445567 799999999


Q ss_pred             HhhcC-------CCCe--------EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHH
Q psy7174         101 LKSSM-------PALL--------KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL  157 (188)
Q Consensus       101 lH~~~-------~~~i--------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~  157 (188)
                      ||+++       |+||        ++|+|||...        .+-|..|  .|||++.... |+..+|+||||++||+|+
T Consensus       431 LH~~gvvhRDLkp~NIL~~~~~g~lrltyFG~a~~~~~~~~tp~~t~~y--~APEvl~~~~-yt~acD~WSLGvlLy~ML  507 (612)
T KOG0603|consen  431 LHEQGVVHRDLKPGNILLDGSAGHLRLTYFGFWSELERSCDTPALTLQY--VAPEVLAIQE-YTEACDWWSLGVLLYEML  507 (612)
T ss_pred             HHhcCeeecCCChhheeecCCCCcEEEEEechhhhCchhhcccchhhcc--cChhhhccCC-CCcchhhHHHHHHHHHHH
Confidence            99998       8888        4899999744        2335567  8999998655 999999999999999999


Q ss_pred             hCCCCCCCCChH
Q psy7174         158 LKAPFLPGESDL  169 (188)
Q Consensus       158 ~g~~pf~~~~~~  169 (188)
                      +|+.||......
T Consensus       508 ~G~tp~~~~P~~  519 (612)
T KOG0603|consen  508 TGRTLFAAHPAG  519 (612)
T ss_pred             hCCCccccCCch
Confidence            999999876554

>PHA02882 putative serine/threonine kinase; Provisional

Probab=99.85  E-value=1.1e-20  Score=148.09  Aligned_cols=126  Identities=17%  Similarity=0.161  Sum_probs=93.6

Q ss_pred             HHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-
Q psy7174          34 EGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQALKSSM-  105 (188)
Q Consensus        34 E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-  105 (188)
                      +...+..++|+||+++++++...    .......+++++++.......+       +..+..++ .|+++||+|||+.+ 
T Consensus        73 ~~~~~~~~~h~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i  147 (294)
T PHA02882         73 LWKNIHNIDHLGIPKYYGCGSFK----RCRMYYRFILLEKLVENTKEIFKRIKCKNKKLIKNIM-KDMLTTLEYIHEHGI  147 (294)
T ss_pred             HHHHhccCCCCCCCcEEEeeeEe----cCCceEEEEEEehhccCHHHHHHhhccCCHHHHHHHH-HHHHHHHHHHHhCCe
Confidence            33445667899999999864221    1112244778887754332221       23345566 89999999999988 


Q ss_pred             ------CCCe-------EEEecCCccc------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174         106 ------PALL-------KKFVGIGIGR------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       106 ------~~~i-------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                            |+|+       ++++|||+++                  ..||..|  +|||+..+.. ++.++||||+||+++
T Consensus       148 iHrDiKp~Nill~~~~~~~l~DFGla~~~~~~~~~~~~~~~~~~~~~gt~~y--~ape~~~~~~-~~~~~DiwSlG~~l~  224 (294)
T PHA02882        148 SHGDIKPENIMVDGNNRGYIIDYGIASHFIIHGKHIEYSKEQKDLHRGTLYY--AGLDAHNGAC-VTRRGDLESLGYCML  224 (294)
T ss_pred             ecCCCCHHHEEEcCCCcEEEEEcCCceeeccCCcccccccccccccCCCccc--cCHHHhCCCC-CCcHHHHHHHHHHHH
Confidence                  6666       5899999854                  2478899  9999988765 899999999999999


Q ss_pred             HHHhCCCCCCCCC
Q psy7174         155 ELLLKAPFLPGES  167 (188)
Q Consensus       155 el~~g~~pf~~~~  167 (188)
                      |+++|++||.+.+
T Consensus       225 el~~g~~P~~~~~  237 (294)
T PHA02882        225 KWAGIKLPWKGFG  237 (294)
T ss_pred             HHHhCCCCCCccc
Confidence            9999999998763

>cd05583 STKc_MSK_N N-terminal catalytic domain of the Protein Serine/Threonine Kinase, Mitogen and stress-activated kinase

Probab=99.85  E-value=3e-20  Score=144.82  Aligned_cols=129  Identities=15%  Similarity=0.180  Sum_probs=103.4

Q ss_pred             hhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ..+++.+|+++++++ +||||+++++.+        ..+...++++||+.++++...        ...+..++ .|+++|
T Consensus        47 ~~~~~~~E~~~l~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~ql~~~  117 (288)
T cd05583          47 TAEHTRTERQVLEAVRRCPFLVTLHYAF--------QTDTKLHLILDYVNGGELFTHLYQREHFTESEVRVYI-AEIVLA  117 (288)
T ss_pred             HHHHHHHHHHHHHhccCCcchhhhheee--------ecCCEEEEEEecCCCCcHHHHHhhcCCcCHHHHHHHH-HHHHHH
Confidence            345678999999999 599999999864        445678999999999998764        23455566 799999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc------------ccccccccCCCCccccccC-CCCchhHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLYCTRGAPELLFGAR-MYGVGIDMWAVG  150 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~y~~~aPe~~~~~~-~~~~~~DiwslG  150 (188)
                      |.|||+.+       |.|+       ++++|||++.            ..++..|  +|||.+.+.. ..+.++|+||+|
T Consensus       118 l~~lH~~~~~H~dl~p~nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~Dv~slG  195 (288)
T cd05583         118 LDHLHQLGIIYRDIKLENILLDSEGHVVLTDFGLSKEFLAEEEERAYSFCGTIEY--MAPEVIRGGSGGHDKAVDWWSLG  195 (288)
T ss_pred             HHHHHHCCeeccCCCHHHeEECCCCCEEEEECccccccccccccccccccCCccc--cCHHHhcCCCCCCcchhhhHHHH
Confidence            99999987       4444       6999999754            2356778  9999986532 367899999999


Q ss_pred             HHHHHHHhCCCCCCCC
Q psy7174         151 CIICELLLKAPFLPGE  166 (188)
Q Consensus       151 ~il~el~~g~~pf~~~  166 (188)
                      +++|+|++|..||...
T Consensus       196 ~il~el~tg~~p~~~~  211 (288)
T cd05583         196 VLTFELLTGASPFTVD  211 (288)
T ss_pred             HHHHHHHhCCCCcccC
Confidence            9999999999999643

Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, in response to various stimuli such as growth factors, hormones, neurotransmitters, cellular stress, and pro-inflammatory cytokines

>cd06618 PKc_MKK7 Catalytic domain of the dual-specificity Protein Kinase, MAP kinase kinase 7

Probab=99.84  E-value=2.5e-20  Score=146.02  Aligned_cols=150  Identities=16%  Similarity=0.223  Sum_probs=107.1

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      +|.||+ .    ++..++|.+++. .....+++.+|+.++.+.. ||||++++++|        ..+...++++||+.+ 
T Consensus        28 ~~~v~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~v~e~~~~-   98 (296)
T cd06618          28 CGQVYKMRFKKTGHVMAVKQMRRTGNKEENKRILMDLDVVLKSHDCPYIVKCYGYF--------ITDSDVFICMELMST-   98 (296)
T ss_pred             CeEEEEEEECCCCeEEEEEEEeccCChHHHHHHHHHHHHHHhccCCCchHhhheee--------ecCCeEEEEeeccCc-
Confidence            566666 1    233345555443 2234456777888777765 99999999976        446678999999864 


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCcccc----------ccc
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGRH----------VCT  123 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~~----------~~~  123 (188)
                      ++..+         ...+..++ .|++.||.|||+. +       |.|+       +||+|||++..          .++
T Consensus        99 ~l~~l~~~~~~~l~~~~~~~i~-~~i~~~l~~lH~~~~i~H~dl~p~nill~~~~~~kL~dfg~~~~~~~~~~~~~~~~~  177 (296)
T cd06618          99 CLDKLLKRIQGPIPEDILGKMT-VAIVKALHYLKEKHGVIHRDVKPSNILLDASGNVKLCDFGISGRLVDSKAKTRSAGC  177 (296)
T ss_pred             CHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhhCCEecCCCcHHHEEEcCCCCEEECccccchhccCCCcccCCCCC
Confidence            44432         22344566 7999999999974 5       4444       69999998642          245


Q ss_pred             ccccCCCCcccccc---CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGA---RMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       124 ~~y~~~aPe~~~~~---~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ..|  +|||.+...   ..++.++|+||+|+++|+|++|+.||...
T Consensus       178 ~~y--~aPE~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~  221 (296)
T cd06618         178 AAY--MAPERIDPPDPNPKYDIRADVWSLGISLVELATGQFPYKNC  221 (296)
T ss_pred             ccc--cCHhhcCCCCCccccccchhHHHHHHHHHHHHhCCCCCCcc
Confidence            678  999998643   23788999999999999999999999653

Protein kinases (PKs), MAP kinase kinase 7 (MKK7) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MKK7 subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). MKK7 is a dual-specificity PK that phosphorylates and activates it

>KOG0670|consensus

Probab=99.84  E-value=1e-21  Score=158.91  Aligned_cols=165  Identities=19%  Similarity=0.294  Sum_probs=125.6

Q ss_pred             ccccccc---c--CCccccccccccchhhhhHHHHHHHHHHhCCC------CCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           4 VCFKPFQ---Q--SKWSPNTPMARCDVNVETQAKAEGKQDRRLDY------ANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         4 ~~g~v~~---~--~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h------~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||++|..   +  +..++||.|.. ..-..+.-++|++||++|+.      -++++|+..|        ...+++|+|+|
T Consensus       444 vFs~Vvra~D~~r~~~vAiKIIRn-NE~M~KtGl~EleiLkKL~~AD~Edk~Hclrl~r~F--------~hknHLClVFE  514 (752)
T KOG0670|consen  444 VFSTVVRARDQARGQEVAIKIIRN-NEVMHKTGLKELEILKKLNDADPEDKFHCLRLFRHF--------KHKNHLCLVFE  514 (752)
T ss_pred             eeeeeeeccccCCCCeeEEEEeec-chHHhhhhhHHHHHHHHhhccCchhhhHHHHHHHHh--------hhcceeEEEeh
Confidence            5666665   1  22333443333 33445667899999999972      3688888854        55789999999


Q ss_pred             ccccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCcccccc-----
Q psy7174          73 IFTKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGRHVC-----  122 (188)
Q Consensus        73 ~~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~~~~-----  122 (188)
                      -+.-..-..+          +.+++.+. .|+..||.+|-..+       |+||        |||||||.+.+.+     
T Consensus       515 ~LslNLRevLKKyG~nvGL~ikaVRsYa-qQLflALklLK~c~vlHaDIKPDNiLVNE~k~iLKLCDfGSA~~~~eneit  593 (752)
T KOG0670|consen  515 PLSLNLREVLKKYGRNVGLHIKAVRSYA-QQLFLALKLLKKCGVLHADIKPDNILVNESKNILKLCDFGSASFASENEIT  593 (752)
T ss_pred             hhhchHHHHHHHhCcccceeehHHHHHH-HHHHHHHHHHHhcCeeecccCccceEeccCcceeeeccCcccccccccccc
Confidence            8764432222          46788888 89999999998887       6665        6999999877554     


Q ss_pred             ----cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         123 ----TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       123 ----~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                          +..|  .|||++++.+ |++..|+||+||+|||+.+|+..|+|..+.+++...-..-|.
T Consensus       594 PYLVSRFY--RaPEIiLG~~-yd~~iD~WSvgctLYElYtGkIlFpG~TNN~MLrl~me~KGk  653 (752)
T KOG0670|consen  594 PYLVSRFY--RAPEIILGLP-YDYPIDTWSVGCTLYELYTGKILFPGRTNNQMLRLFMELKGK  653 (752)
T ss_pred             HHHHHHhc--cCcceeecCc-ccCCccceeeceeeEEeeccceecCCCCcHHHHHHHHHhcCC
Confidence                4568  9999999987 999999999999999999999999999998888766554443

>KOG0576|consensus

Probab=99.83  E-value=1.2e-21  Score=162.17  Aligned_cols=164  Identities=20%  Similarity=0.175  Sum_probs=132.2

Q ss_pred             cccccc-cCCccc----cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSKWSP----NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~~~~----~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      +|.||+ .++.+.    +|.||--..++.+-+++|+-+++.++||||+.|++-+        ..++..|++||||.+|++
T Consensus        28 ygdvyKaRd~~s~elaavkvVkLep~dd~~~iqqei~~~~dc~h~nivay~gsy--------lr~dklwicMEycgggsl   99 (829)
T KOG0576|consen   28 YGDVYKARDKRSGELAAVKVVKLEPGDDFSGIQQEIGMLRDCRHPNIVAYFGSY--------LRRDKLWICMEYCGGGSL   99 (829)
T ss_pred             ccchhhhcccccCchhhheeeeccCCccccccccceeeeecCCCcChHHHHhhh--------hhhcCcEEEEEecCCCcc
Confidence            788998 444333    4544444566778889999999999999999999954        778899999999999999


Q ss_pred             HHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          80 ARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        80 ~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      ++.        +.++.+.. ++.+.||+|||+.+       ..|+       +|+.|||.+.           +.||+++
T Consensus       100 Qdiy~~Tgplselqiayvc-Retl~gl~ylhs~gk~hRdiKGanilltd~gDvklaDfgvsaqitati~KrksfiGtpyw  178 (829)
T KOG0576|consen  100 QDIYHVTGPLSELQIAYVC-RETLQGLKYLHSQGKIHRDIKGANILLTDEGDVKLADFGVSAQITATIAKRKSFIGTPYW  178 (829)
T ss_pred             cceeeecccchhHHHHHHH-hhhhccchhhhcCCcccccccccceeecccCceeecccCchhhhhhhhhhhhcccCCccc
Confidence            985        56788888 99999999999988       3344       6999999743           7899999


Q ss_pred             cCCCCcccc--ccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         127 TRGAPELLF--GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       127 ~~~aPe~~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                        ||||+..  ....|+..+|+|++|++..|+..-++|.....++..+..+-...
T Consensus       179 --mapEvaaverkggynqlcdiwa~gitAiel~eLqpplfdlhpmr~l~LmTkS~  231 (829)
T KOG0576|consen  179 --MAPEVAAVERKGGYNQLCDIWALGITAIELGELQPPLFDLHPMRALFLMTKSG  231 (829)
T ss_pred             --cchhHHHHHhcccccccccccccccchhhhhhcCCcccccchHHHHHHhhccC
Confidence              9999863  22349999999999999999999999987777777766665443

>cd05610 STKc_MASTL Catalytic domain of the Protein Serine/Threonine Kinase, Microtubule-associated serine/threonine-like kinase

Probab=99.83  E-value=9e-20  Score=157.45  Aligned_cols=104  Identities=15%  Similarity=0.121  Sum_probs=79.0

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     .++..++|.+++.   .....+.+.+|+.+++.++||||+++++++        ......+++|||+.+
T Consensus        17 fg~Vy~a~~~~~~~~vAiKvi~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~--------~~~~~~~lVmEy~~g   88 (669)
T cd05610          17 FGKVYLGRKKNNSKLYAVKVVKKADMINKNMVHQVQAERDALALSKSPFIVHLYYSL--------QSANNVYLVMEYLIG   88 (669)
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhhccCHHHHHHHHHHHHHHHhcCCCCcCeEEEEE--------EECCEEEEEEeCCCC
Confidence            678887     2345556655542   233446788999999999999999999865        445678999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI  117 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~  117 (188)
                      ++|..+.        ..++.++ .||+.||.|||+.+       |+||       +||+|||+
T Consensus        89 ~~L~~li~~~~~l~~~~~~~i~-~qil~aL~yLH~~gIiHrDLKP~NILl~~~g~vkL~DFGl  150 (669)
T cd05610          89 GDVKSLLHIYGYFDEEMAVKYI-SEVALALDYLHRHGIIHRDLKPDNMLISNEGHIKLTDFGL  150 (669)
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCEEeCCccHHHEEEcCCCCEEEEeCCC
Confidence            9998763        3456666 89999999999988       5555       58888875

Serine/Threonine Kinases (STKs), Microtubule-associated serine/threonine (MAST) kinase subfamily, MAST-like (MASTL) kinases, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MAST kinase subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAST kinases contain an N-terminal domain of unknown function, a central catalytic domain, and a C-terminal PDZ domain that mediates protein-protein interactions. The MASTL kinases in this group carry only a catalytic domain, which contains a long insertion relative to MAST kinases. The human MASTL gene has also been labelled FLJ14813. A missense mutation in FLJ1481

>KOG0695|consensus

Probab=99.83  E-value=3.6e-20  Score=143.57  Aligned_cols=136  Identities=18%  Similarity=0.212  Sum_probs=113.6

Q ss_pred             ccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH--------HHH
Q psy7174          17 NTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR--------FYS   84 (188)
Q Consensus        17 ~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~--------~~~   84 (188)
                      +|.+|+-   ..++....+.|..+..+. +||.+|-++++|        +.+..++.|.||+++|+|--        -++
T Consensus       280 mkvvkkel~nddedidwvqtek~vfe~asn~pflvglhscf--------qtesrlffvieyv~ggdlmfhmqrqrklpee  351 (593)
T KOG0695|consen  280 MKVVKKELVNDDEDIDWVQTEKHVFEQASNNPFLVGLHSCF--------QTESRLFFVIEYVNGGDLMFHMQRQRKLPEE  351 (593)
T ss_pred             hhhHHHHhcCCcccchhHHhhHHHHHhccCCCeEEehhhhh--------cccceEEEEEEEecCcceeeehhhhhcCcHH
Confidence            5555552   333445567899998877 499999999976        67788999999999999743        167


Q ss_pred             HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc-----------ccccccccccCCCCccccccCC
Q psy7174          85 HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI-----------GRHVCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        85 ~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~-----------~~~~~~~~y~~~aPe~~~~~~~  139 (188)
                      +.+++. .+|+.||.|||+.|       .+|+       +|++|+|+           ++++||+.|  .|||.+.+.. 
T Consensus       352 harfys-~ei~lal~flh~rgiiyrdlkldnvlldaeghikltdygmcke~l~~gd~tstfcgtpny--iapeilrgee-  427 (593)
T KOG0695|consen  352 HARFYS-AEICLALNFLHERGIIYRDLKLDNVLLDAEGHIKLTDYGMCKEGLGPGDTTSTFCGTPNY--IAPEILRGEE-  427 (593)
T ss_pred             Hhhhhh-HHHHHHHHHHhhcCeeeeeccccceEEccCCceeecccchhhcCCCCCcccccccCCCcc--cchhhhcccc-
Confidence            788888 89999999999999       3344       59999996           558999999  9999999876 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      |+-.+|+|+||++++||+.|+.||.
T Consensus       428 ygfsvdwwalgvlmfemmagrspfd  452 (593)
T KOG0695|consen  428 YGFSVDWWALGVLMFEMMAGRSPFD  452 (593)
T ss_pred             cCceehHHHHHHHHHHHHcCCCCcc
Confidence            9999999999999999999999994

>smart00221 STYKc Protein kinase; unclassified specificity

Probab=99.82  E-value=4.1e-19  Score=132.79  Aligned_cols=163  Identities=21%  Similarity=0.265  Sum_probs=118.2

Q ss_pred             cccccc--c---CCccccccccccchh-hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ--Q---SKWSPNTPMARCDVN-VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~--~---~~~~~~~~i~~~~~~-~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      +|.+|+  .   ++..++|.+...... ..+.+.+|++.+++++|+|++++++.+        ..+...++++|++.+++
T Consensus        12 ~~~v~~~~~~~~~~~~~iK~~~~~~~~~~~~~~~~e~~~~~~~~~~~i~~~~~~~--------~~~~~~~~v~e~~~~~~   83 (225)
T smart00221       12 FGKVYLARDKGTGELVAVKVLKKEKTEKQREEFLREIRILKKLKHPNIVKLYGVF--------EDPEPLYLVMEYCEGGD   83 (225)
T ss_pred             CeEEEEEEEcCCCcEEEEEeeccccchHHHHHHHHHHHHHHhCCCCChhhheeee--------ecCCceEEEEeccCCCC
Confidence            566676  2   122234444333333 567889999999999999999999974        34467899999999988


Q ss_pred             HHHHHH---------HHHHHHHHHHHHHHHHHhhcC--------------CCCeEEEecCCcccc------------ccc
Q psy7174          79 KARFYS---------HLRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRH------------VCT  123 (188)
Q Consensus        79 l~~~~~---------~~~~~~~~qi~~gl~~lH~~~--------------~~~ilkl~dfg~~~~------------~~~  123 (188)
                      +..+..         .+..++ .|++.++.+||+.+              ++..++++|||.+..            .++
T Consensus        84 L~~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~~i~h~di~~~ni~v~~~~~~~l~d~g~~~~~~~~~~~~~~~~~~~  162 (225)
T smart00221       84 LFDYLRKKGGKLSEEEARFYL-RQILEALEYLHSLGIVHRDLKPENILLGMDGLVKLADFGLARFIHRDLAALLKTVKGT  162 (225)
T ss_pred             HHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeeCceeeEecCcccccccceecc
Confidence            887632         244555 79999999999988              233479999997542            244


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC-CChH-HHHHHHHhh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG-ESDL-DQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~-~~~~-~~~~~i~~~  178 (188)
                      ..|  ++||.......++.++|+|++|++++++++|+.||.+ .++. ...+.|...
T Consensus       163 ~~~--~~pe~~~~~~~~~~~~Dv~~lG~~~~~l~~g~~pf~~~~~~~~~~~~~~~~~  217 (225)
T smart00221      163 PFY--LAPEVLLGGKGYGEAVDIWSLGVILYELLWGPEPFSGEGEFTSLLSDVWSFG  217 (225)
T ss_pred             CCc--CCHhHhcCCCCCCchhhHHHHHHHHHHHHHCCCCccccchhHHHHHHHHhcC
Confidence            457  8999983223478899999999999999999999977 4444 445555433

Phosphotransferases. The specificity of this class of kinases can not be predicted. Possible dual-specificity Ser/Thr/Tyr kinase.

>KOG1290|consensus

Probab=99.82  E-value=9.9e-20  Score=146.29  Aligned_cols=88  Identities=14%  Similarity=0.127  Sum_probs=66.3

Q ss_pred             CCccccccccccchhhhhHHHHHHHHHHhCC-----C---CCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-
Q psy7174          12 SKWSPNTPMARCDVNVETQAKAEGKQDRRLD-----Y---ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-   82 (188)
Q Consensus        12 ~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~-----h---~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-   82 (188)
                      ++|+++|.+|. .....+-+.-||++|++++     |   .+||+|++.|    ..++.++.+.|+|+|++....|..+ 
T Consensus       103 ~r~VAlKVvKS-AqhYtEaAlDEIklL~~v~~~Dp~~~~~~~VV~LlD~F----khsGpNG~HVCMVfEvLGdnLLklI~  177 (590)
T KOG1290|consen  103 KRYVALKVVKS-AQHYTEAALDEIKLLQQVREGDPNDPGKKCVVQLLDHF----KHSGPNGQHVCMVFEVLGDNLLKLIK  177 (590)
T ss_pred             CeEEEEEEEeh-hhHHHHHHHHHHHHHHHHHhcCCCCCCCceeeeeeccc----eecCCCCcEEEEEehhhhhHHHHHHH
Confidence            44555554333 2333455678999999986     2   2699999974    5588999999999999987777765 


Q ss_pred             --------HHHHHHHHHHHHHHHHHHHhhcC
Q psy7174          83 --------YSHLRYLENQQILEGLQALKSSM  105 (188)
Q Consensus        83 --------~~~~~~~~~~qi~~gl~~lH~~~  105 (188)
                              ...++.++ +||+.||.|||+..
T Consensus       178 ~s~YrGlpl~~VK~I~-~qvL~GLdYLH~ec  207 (590)
T KOG1290|consen  178 YSNYRGLPLSCVKEIC-RQVLTGLDYLHREC  207 (590)
T ss_pred             HhCCCCCcHHHHHHHH-HHHHHHHHHHHHhc
Confidence                    35677788 99999999999975

>smart00220 S_TKc Serine/Threonine protein kinases, catalytic domain

Probab=99.82  E-value=3.4e-19  Score=134.26  Aligned_cols=149  Identities=26%  Similarity=0.398  Sum_probs=114.2

Q ss_pred             cccccc-cC----Cccccccccccchhh-hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNV-ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~-~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.+|+ ..    +..++|.+....... .+.+.+|++.+++++|+||+++++.+        ..+...++++|++.+++
T Consensus         2 ~g~v~~~~~~~~~~~~~~k~~~~~~~~~~~~~~~~e~~~~~~l~~~~i~~~~~~~--------~~~~~~~l~~e~~~~~~   73 (244)
T smart00220        2 FGKVYLARDKKTGKLVAIKVIKKEKIKKKRERILREISILKKLKHPNIVRLYDVF--------EDEDKLYLVMEYCDGGD   73 (244)
T ss_pred             ceEEEEEEECCCCcEEEEEEecccccccHHHHHHHHHHHHHhCCCCcHHHHHhhe--------eeCCEEEEEEeCCCCCC
Confidence            677887 22    223344333322222 67889999999999999999999975        33467899999999989


Q ss_pred             HHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccc
Q psy7174          79 KARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYC  126 (188)
Q Consensus        79 l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y  126 (188)
                      +..+.        ..+..++ .+++.++.+||+.+       |.|+       ++++|||...          ..++..|
T Consensus        74 L~~~~~~~~~~~~~~~~~~~-~~l~~~l~~lh~~~i~h~~i~~~ni~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~  152 (244)
T smart00220       74 LFDLLKKRGRLSEDEARFYA-RQILSALEYLHSNGIIHRDLKPENILLDEDGHVKLADFGLARQLDPGGLLTTFVGTPEY  152 (244)
T ss_pred             HHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHHcCeecCCcCHHHeEECCCCcEEEccccceeeeccccccccccCCcCC
Confidence            88753        2344555 79999999999988       3333       6999999754          3356678


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                        ++||...... ++.++|+||+|++++++++|..||..
T Consensus       153 --~~pE~~~~~~-~~~~~Di~slG~~l~~l~~~~~p~~~  188 (244)
T smart00220      153 --MAPEVLLGKG-YGKAVDVWSLGVILYELLTGKPPFPG  188 (244)
T ss_pred             --CCHHHHccCC-CCchhhHHHHHHHHHHHHhCCCCCCC
Confidence              9999987654 88999999999999999999999977

Phosphotransferases. Serine or threonine-specific kinase subfamily.

>KOG2052|consensus

Probab=99.81  E-value=2e-19  Score=143.18  Aligned_cols=175  Identities=15%  Similarity=0.219  Sum_probs=125.8

Q ss_pred             cccccccCCccc-cccccccchhhhhHHHHHHHHHHh--CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQQSKWSP-NTPMARCDVNVETQAKAEGKQDRR--LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~~~~~~~-~~~i~~~~~~~~~~~~~E~~il~~--l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.|+. ++|.. -+|+|.-...+.+.+.||.+|.+.  |+|+||+.|++.   +..+. -.-..+|++.+|-..|+|.+
T Consensus       224 yGEVwr-G~wrGe~VAVKiF~srdE~SWfrEtEIYqTvmLRHENILgFIaa---D~~~~-gs~TQLwLvTdYHe~GSL~D  298 (513)
T KOG2052|consen  224 FGEVWR-GRWRGEDVAVKIFSSRDERSWFRETEIYQTVMLRHENILGFIAA---DNKDN-GSWTQLWLVTDYHEHGSLYD  298 (513)
T ss_pred             ccceee-ccccCCceEEEEecccchhhhhhHHHHHHHHHhccchhhhhhhc---cccCC-CceEEEEEeeecccCCcHHH
Confidence            566666 34444 566666666778889999999875  699999999985   11111 11246799999999999999


Q ss_pred             HH-------HHHHHHHHHHHHHHHHHHhhcC---------------CCCe-------EEEecCCccc-------------
Q psy7174          82 FY-------SHLRYLENQQILEGLQALKSSM---------------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        82 ~~-------~~~~~~~~~qi~~gl~~lH~~~---------------~~~i-------lkl~dfg~~~-------------  119 (188)
                      ++       +....++ ..++.||+|||..=               .-||       .-|+|+|++-             
T Consensus       299 yL~r~tv~~~~ml~La-lS~AsGLaHLH~eI~GTqgKPaIAHRDlKSKNILVKkn~~C~IADLGLAv~h~~~t~~idi~~  377 (513)
T KOG2052|consen  299 YLNRNTVTTEGMLKLA-LSIASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSDTDTIDIPP  377 (513)
T ss_pred             HHhhccCCHHHHHHHH-HHHhhhHHHHHHHHhcCCCCchhhccccccccEEEccCCcEEEeeceeeEEecccCCcccCCC
Confidence            74       2344455 68999999999842               2244       3689999742             


Q ss_pred             --ccccccccCCCCccccccCC---CC--chhHHHHHHHHHHHHHh-----C-----CCCCCC----CChHHHHHHH--H
Q psy7174         120 --HVCTLYCTRGAPELLFGARM---YG--VGIDMWAVGCIICELLL-----K-----APFLPG----ESDLDQLTRI--F  176 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~---~~--~~~DiwslG~il~el~~-----g-----~~pf~~----~~~~~~~~~i--~  176 (188)
                        .+||..|  ||||++.....   +.  ..+||||||.++||++-     |     ++||.+    +...+.+.++  .
T Consensus       378 N~rVGTKRY--MAPEvLdetin~~~Fesyk~ADIYafgLVlWEiarRc~~ggi~eey~~Pyyd~Vp~DPs~eeMrkVVCv  455 (513)
T KOG2052|consen  378 NPRVGTKRY--MAPEVLDETINMKHFESYKRADIYAFGLVLWEIARRCESGGIVEEYQLPYYDVVPSDPSFEEMRKVVCV  455 (513)
T ss_pred             CCccceeec--cChHHhhhhcChhhhhhhhHHHHHHHHHHHHHHHHHhhcCCEehhhcCCcccCCCCCCCHHHHhcceee
Confidence              6799999  99999965432   22  46999999999999974     2     678865    3444555555  4


Q ss_pred             hhcCCCCCCCC
Q psy7174         177 QTLGTPSEDTW  187 (188)
Q Consensus       177 ~~~~~p~~~~~  187 (188)
                      +.++++.|..|
T Consensus       456 ~~~RP~ipnrW  466 (513)
T KOG2052|consen  456 QKLRPNIPNRW  466 (513)
T ss_pred             cccCCCCCccc
Confidence            67888888877

>KOG3653|consensus

Probab=99.80  E-value=2.1e-19  Score=143.91  Aligned_cols=148  Identities=17%  Similarity=0.196  Sum_probs=111.8

Q ss_pred             cccccccCCccccccccccchhhhhHHHHHHHHHHh--CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRR--LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~~~~~~~~~~~E~~il~~--l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+..=....+|+|.-...+.+.+++|-+|.+.  ++|+||++|+++    .+.....+...++|++|.+.|+|.++
T Consensus       223 fg~V~KaqL~~~~VAVKifp~~~kqs~~~Ek~Iy~lp~m~h~nIl~Fi~~----ekr~t~~~~eywLVt~fh~kGsL~dy  298 (534)
T KOG3653|consen  223 FGCVWKAQLDNRLVAVKIFPEQEKQSFQNEKNIYSLPGMKHENILQFIGA----EKRGTADRMEYWLVTEFHPKGSLCDY  298 (534)
T ss_pred             cceeehhhccCceeEEEecCHHHHHHHHhHHHHHhccCccchhHHHhhch----hccCCccccceeEEeeeccCCcHHHH
Confidence            789998211113455556667888999999999886  569999999986    22222235678999999999999997


Q ss_pred             H-------HHHHHHHHHHHHHHHHHHhhcC----------------CCCeE-------EEecCCccc-------------
Q psy7174          83 Y-------SHLRYLENQQILEGLQALKSSM----------------PALLK-------KFVGIGIGR-------------  119 (188)
Q Consensus        83 ~-------~~~~~~~~~qi~~gl~~lH~~~----------------~~~il-------kl~dfg~~~-------------  119 (188)
                      +       .....+. ..++.||+|||+..                ..|+|       -|+|||++.             
T Consensus       299 L~~ntisw~~~cria-~SmarGLa~LHee~p~~d~~Kp~IaHRDlkSkNVLvK~DlTccIaDFGLAl~~~p~~~~~d~~~  377 (534)
T KOG3653|consen  299 LKANTISWNSLCRIA-ESMARGLAHLHEELPRGDHHKPPIAHRDLKSKNVLVKNDLTCCIADFGLALRLEPGKPQGDTHG  377 (534)
T ss_pred             HHhccccHHHHHHHH-HHHHHHHHHhcccCCcCCCCCCccccccccccceEEccCCcEEeeccceeEEecCCCCCcchhh
Confidence            4       2345555 68999999999965                23443       699999853             


Q ss_pred             ccccccccCCCCccccccCCCC-----chhHHHHHHHHHHHHHhC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYG-----VGIDMWAVGCIICELLLK  159 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~-----~~~DiwslG~il~el~~g  159 (188)
                      .+||..|  ||||++.+..++.     ...||||+|.++||+++.
T Consensus       378 qVGT~RY--MAPEvLEgainl~d~~Afkr~DvYamgLVLWEi~SR  420 (534)
T KOG3653|consen  378 QVGTRRY--MAPEVLEGAINLQDRDAFKRIDVYAMGLVLWEIASR  420 (534)
T ss_pred             hhhhhhh--cCHHHHhhhcccccHHHHHHHHHHHHHHHHHHHHhh
Confidence            6799999  9999997644343     578999999999999874

>KOG1152|consensus

Probab=99.80  E-value=2.4e-20  Score=152.50  Aligned_cols=150  Identities=18%  Similarity=0.227  Sum_probs=113.6

Q ss_pred             cccccc----cCCccc-ccccccc------chhhh--hHHHHHHHHHHhCC---CCCeeEEeeecccccCCCCCCCCccE
Q psy7174           5 CFKPFQ----QSKWSP-NTPMARC------DVNVE--TQAKAEGKQDRRLD---YANIIQYLSLPVETLQPTTLSTSSDY   68 (188)
Q Consensus         5 ~g~v~~----~~~~~~-~~~i~~~------~~~~~--~~~~~E~~il~~l~---h~niv~~~~~~~~~~~~~~~~~~~~~   68 (188)
                      ||+|..    .+.|.. +|.|+|.      ..+++  -..-.||+||..++   |+||++++++|        .++...|
T Consensus       574 yGkV~lai~K~n~~eVViK~I~KeRIL~DtWvrDrkLGtVp~EIqIla~l~~~sH~NIlKlLdfF--------Eddd~yy  645 (772)
T KOG1152|consen  574 YGKVNLAIHKENNYEVVIKMIFKERILVDTWVRDRKLGTVPSEIQILATLNKHSHENILKLLDFF--------EDDDYYY  645 (772)
T ss_pred             cceEEEeeecccceEEEeeehhhhhhhhhhhhcccccCccchhHHHHHHhhhcCccchhhhhhee--------ecCCeeE
Confidence            677776    233333 6666661      11111  12446999999998   99999999986        5677778


Q ss_pred             EEEeccccc-cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------
Q psy7174          69 IVVKIFTKT-TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------  119 (188)
Q Consensus        69 iv~e~~~~~-~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------  119 (188)
                      +.+|--..| +|.++        +...+.++ +|++.|+++||+.+       .+|+       +|++|||.+.      
T Consensus       646 l~te~hg~gIDLFd~IE~kp~m~E~eAk~IF-kQV~agi~hlh~~~ivhrdikdenvivd~~g~~klidfgsaa~~ksgp  724 (772)
T KOG1152|consen  646 LETEVHGEGIDLFDFIEFKPRMDEPEAKLIF-KQVVAGIKHLHDQGIVHRDIKDENVIVDSNGFVKLIDFGSAAYTKSGP  724 (772)
T ss_pred             EEecCCCCCcchhhhhhccCccchHHHHHHH-HHHHhccccccccCceecccccccEEEecCCeEEEeeccchhhhcCCC
Confidence            888866544 33333        34567788 99999999999998       3344       6999999754      


Q ss_pred             ---ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         120 ---HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                         ++||..|  .|||++.+.+.-+..-|||++|+++|.+.....||..
T Consensus       725 fd~f~gtv~~--aapevl~g~~y~gk~qdiwalgillytivykenpyyn  771 (772)
T KOG1152|consen  725 FDVFVGTVDY--AAPEVLGGEKYLGKPQDIWALGILLYTIVYKENPYYN  771 (772)
T ss_pred             cceeeeeccc--cchhhhCCCccCCCcchhhhhhheeeEEEeccCCCcC
Confidence               7899999  9999999888567889999999999999999999863

>KOG1024|consensus

Probab=99.77  E-value=6.1e-18  Score=133.26  Aligned_cols=161  Identities=12%  Similarity=0.133  Sum_probs=128.0

Q ss_pred             ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-----------
Q psy7174          17 NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-----------   84 (188)
Q Consensus        17 ~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-----------   84 (188)
                      +|.+|.. +.-....++.|.-.+..+.|||+.++.+++.|       +....+++.-+...|+|..+..           
T Consensus       319 vKTvk~~AS~iQv~~~L~es~lly~~sH~nll~V~~V~ie-------~~~~P~V~y~~~~~gNLK~FL~~Cr~~~~~~aq  391 (563)
T KOG1024|consen  319 VKTVKQHASQIQVNLLLQESMLLYGASHPNLLSVLGVSIE-------DYATPFVLYPATGVGNLKSFLQICRGDDPSYAQ  391 (563)
T ss_pred             HHHHHhcccHHHHHHHHHHHHHHhcCcCCCccceeEEEee-------ccCcceEEEeccCcchHHHHHHHhccCCCcccc
Confidence            6666663 44556678889999999999999999998643       4567889999999999988743           


Q ss_pred             -----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------cc-----cccccCCCCc
Q psy7174          85 -----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------VC-----TLYCTRGAPE  132 (188)
Q Consensus        85 -----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------~~-----~~~y~~~aPe  132 (188)
                           ++.... .|++.|++|||+++       ..|.       +|++|=.+++.        .|     .-.+  |+||
T Consensus       392 tvtt~qlV~ma-sQla~am~hlh~~~ViHkDiAaRNCvIdd~LqVkltDsaLSRDLFP~DYhcLGDnEnRPvkW--MslE  468 (563)
T KOG1024|consen  392 TVTTIQLVLMA-SQLAMAMEHLHNHGVIHKDIAARNCVIDDQLQVKLTDSALSRDLFPGDYHCLGDNENRPVKW--MSLE  468 (563)
T ss_pred             chhHHHHHHHH-HHHHHHHHHHHhcCcccchhhhhcceehhheeEEeccchhccccCcccccccCCCCCCcccc--cCHH
Confidence                 233344 79999999999998       2222       69999888762        22     2345  8999


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         133 LLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       133 ~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .+.+.. |+..+|+||||+++||+++ |+.|+...++.++..-+..+++.-.|--||
T Consensus       469 al~n~~-yssasDvWsfGVllWELmtlg~~PyaeIDPfEm~~ylkdGyRlaQP~NCP  524 (563)
T KOG1024|consen  469 ALQNSH-YSSASDVWSFGVLLWELMTLGKLPYAEIDPFEMEHYLKDGYRLAQPFNCP  524 (563)
T ss_pred             HHhhhh-hcchhhhHHHHHHHHHHHhcCCCCccccCHHHHHHHHhccceecCCCCCc
Confidence            999866 9999999999999999996 999999999999988888888776666665

>KOG1027|consensus

Probab=99.77  E-value=5.8e-19  Score=149.21  Aligned_cols=137  Identities=20%  Similarity=0.235  Sum_probs=108.3

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-----------
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-----------   84 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-----------   84 (188)
                      -+|+|+...+-...+.||+..|+.-+ |||||++++        ...++...||..|.|.- +|+++.+           
T Consensus       535 ~VAVKrll~e~~~~A~rEi~lL~eSD~H~NviRyyc--------~E~d~qF~YIalELC~~-sL~dlie~~~~d~~~~~~  605 (903)
T KOG1027|consen  535 EVAVKRLLEEFFDFAQREIQLLQESDEHPNVIRYYC--------SEQDRQFLYIALELCAC-SLQDLIESSGLDVEMQSD  605 (903)
T ss_pred             eehHHHHhhHhHHHHHHHHHHHHhccCCCceEEEEe--------eccCCceEEEEehHhhh-hHHHHHhccccchhhccc
Confidence            56666765666678899999999886 999999998        34778899999999954 3443311           


Q ss_pred             -HHHHHHHHHHHHHHHHHhhcC-------CCCeE------------EEecCCccc--------------ccccccccCCC
Q psy7174          85 -HLRYLENQQILEGLQALKSSM-------PALLK------------KFVGIGIGR--------------HVCTLYCTRGA  130 (188)
Q Consensus        85 -~~~~~~~~qi~~gl~~lH~~~-------~~~il------------kl~dfg~~~--------------~~~~~~y~~~a  130 (188)
                       .....+ .|+++||++||+.+       |.|||            +|+|||++.              ..||..+  .|
T Consensus       606 i~~~~~l-~q~~~GlaHLHsl~iVHRDLkPQNILI~~~~~~~~~ra~iSDfglsKkl~~~~sS~~r~s~~sGt~GW--~A  682 (903)
T KOG1027|consen  606 IDPISVL-SQIASGLAHLHSLKIVHRDLKPQNILISVPSADGTLRAKISDFGLSKKLAGGKSSFSRLSGGSGTSGW--QA  682 (903)
T ss_pred             ccHHHHH-HHHHHHHHHHHhcccccccCCCceEEEEccCCCcceeEEecccccccccCCCcchhhcccCCCCcccc--cC
Confidence             123455 79999999999987       78874            899999744              4578888  99


Q ss_pred             CccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCCC
Q psy7174         131 PELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGE  166 (188)
Q Consensus       131 Pe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~  166 (188)
                      ||++...+ -+.++||+|+||++|..++| ..||...
T Consensus       683 PE~L~~~~-~~~avDiFslGCvfyYvltgG~HpFGd~  718 (903)
T KOG1027|consen  683 PEQLREDR-KTQAVDIFSLGCVFYYVLTGGSHPFGDS  718 (903)
T ss_pred             HHHHhccc-cCcccchhhcCceEEEEecCCccCCCch
Confidence            99998876 67799999999999999875 8999643

>smart00750 KIND kinase non-catalytic C-lobe domain

Probab=99.73  E-value=4.2e-17  Score=118.37  Aligned_cols=80  Identities=21%  Similarity=0.229  Sum_probs=66.6

Q ss_pred             HHHHHHHHHHHHHHHHHHHhhcC-CCCeE-------EEecCCccc------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          83 YSHLRYLENQQILEGLQALKSSM-PALLK-------KFVGIGIGR------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        83 ~~~~~~~~~~qi~~gl~~lH~~~-~~~il-------kl~dfg~~~------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      +..+..++ .|+++||.|||+.+ |+|++       |+  ||++.      ..|+..|  +|||++.+.. ++.++||||
T Consensus        16 ~~~~~~i~-~qi~~~L~~lH~~~kp~Nil~~~~~~~~~--fG~~~~~~~~~~~g~~~y--~aPE~~~~~~-~~~~~DiwS   89 (176)
T smart00750       16 EEEIWAVC-LQCLRALRELHRQAKSGNILLTWDGLLKL--DGSVAFKTPEQSRVDPYF--MAPEVIQGQS-YTEKADIYS   89 (176)
T ss_pred             HHHHHHHH-HHHHHHHHHHHhcCCcccEeEcCccceee--ccceEeeccccCCCcccc--cChHHhcCCC-CcchhhHHH
Confidence            34566677 89999999999988 77774       55  88754      3578899  9999998865 999999999


Q ss_pred             HHHHHHHHHhCCCCCCCCCh
Q psy7174         149 VGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       149 lG~il~el~~g~~pf~~~~~  168 (188)
                      +||++|||++|+.||.....
T Consensus        90 lG~il~elltg~~p~~~~~~  109 (176)
T smart00750       90 LGITLYEALDYELPYNEERE  109 (176)
T ss_pred             HHHHHHHHHhCCCCccccch
Confidence            99999999999999976543

It is an interaction domain identified as being similar to the C-terminal protein kinase catalytic fold (C lobe). Its presence at the N terminus of signalling proteins and the absence of the active-site residues in the catalytic and activation loops suggest that it folds independently and is likely to be non-catalytic. The occurrence of KIND only in metazoa implies that it has evolved from the catalytic protein kinase domain into an interaction domain possibly by keeping the substrate-binding features

>KOG1167|consensus

Probab=99.71  E-value=2.4e-17  Score=130.36  Aligned_cols=154  Identities=23%  Similarity=0.318  Sum_probs=124.9

Q ss_pred             ccccccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-----HHHHH
Q psy7174          14 WSPNTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-----YSHLR   87 (188)
Q Consensus        14 ~~~~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-----~~~~~   87 (188)
                      ++++|++..  +....++.+|++.|..+. +.||+++.+++        -.++...++++|++..+...+     ...++
T Consensus        66 ~valk~i~~--ts~p~ri~~El~~L~~~gG~~ni~~~~~~~--------rnnd~v~ivlp~~~H~~f~~l~~~l~~~~i~  135 (418)
T KOG1167|consen   66 YVALKAIYR--TSSPSRILNELEMLYRLGGSDNIIKLNGCF--------RNNDQVAIVLPYFEHDRFRDLYRSLSLAEIR  135 (418)
T ss_pred             eEeeeeccc--ccCchHHHHHHHHHHHhccchhhhcchhhh--------ccCCeeEEEecccCccCHHHHHhcCCHHHHH
Confidence            444555544  455577999999999997 99999999975        567889999999999988876     45788


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCeE--------EEecCCccc---------------------------------
Q psy7174          88 YLENQQILEGLQALKSSM-------PALLK--------KFVGIGIGR---------------------------------  119 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~il--------kl~dfg~~~---------------------------------  119 (188)
                      +++ +.++.||.++|.+|       |+|.+        .|.|||++.                                 
T Consensus       136 ~Yl-~~ll~Al~~~h~~GIvHRDiKpsNFL~n~~t~rg~LvDFgLA~~~d~~~~~~~s~~~~~~~~~~~~g~~~~~~~~~  214 (418)
T KOG1167|consen  136 WYL-RNLLKALAHLHKNGIVHRDIKPSNFLYNRRTQRGVLVDFGLAQRYDGYQQTEHSRSYSGRHATPAMGKDVHCQSVA  214 (418)
T ss_pred             HHH-HHHHHHhhhhhccCccccCCCccccccccccCCceEEechhHHHHHhhhhhhhhhhhhcccCCccccCcccccccc
Confidence            888 89999999999999       77775        689999611                                 


Q ss_pred             ----------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHH
Q psy7174         120 ----------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL-PGESDLDQLTRIF  176 (188)
Q Consensus       120 ----------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf-~~~~~~~~~~~i~  176 (188)
                                            ..||+.|  +|||++...+..+.++||||.|+|+..+++++.|| ...++.+.+.+|.
T Consensus       215 ~~~~p~g~~~~~~~~r~~~~anrAGT~Gf--RaPEvL~k~~~QttaiDiws~GVI~Lslls~~~PFf~a~dd~~al~ei~  292 (418)
T KOG1167|consen  215 TASKPAGYYRRCNDGRPSERANRAGTPGF--RAPEVLFRCPRQTTAIDIWSAGVILLSLLSRRYPFFKAKDDADALAEIA  292 (418)
T ss_pred             cccCCCCceeccCCCccceecccCCCCCC--CchHHHhhccCcCCccceeeccceeehhhccccccccCccccchHHHHH
Confidence                                  3578889  99999987776889999999999999999998776 4556666777776


Q ss_pred             hhcC
Q psy7174         177 QTLG  180 (188)
Q Consensus       177 ~~~~  180 (188)
                      ..+|
T Consensus       293 tifG  296 (418)
T KOG1167|consen  293 TIFG  296 (418)
T ss_pred             HHhC
Confidence            6554

>PLN03225 Serine/threonine-protein kinase SNT7; Provisional

Probab=99.70  E-value=1.1e-16  Score=135.79  Aligned_cols=99  Identities=18%  Similarity=0.221  Sum_probs=74.8

Q ss_pred             CCCCccEEEEeccccccHHHHHH----------------------------HHHHHHHHHHHHHHHHHhhcC-------C
Q psy7174          62 LSTSSDYIVVKIFTKTTKARFYS----------------------------HLRYLENQQILEGLQALKSSM-------P  106 (188)
Q Consensus        62 ~~~~~~~iv~e~~~~~~l~~~~~----------------------------~~~~~~~~qi~~gl~~lH~~~-------~  106 (188)
                      ..+...++++||+.+++|..+..                            .+..++ .|++.||.|||+.+       |
T Consensus       205 ~~~~~~~LV~ey~~~gsL~~~l~~~~~~~~v~~~l~~~~~~l~~~~~r~~~~i~~i~-~qll~aL~yLH~~gIiHRDLKP  283 (566)
T PLN03225        205 KKEDEYWLVWRYEGESTLADLMQSKEFPYNVEPYLLGKVQDLPKGLERENKIIQTIM-RQILFALDGLHSTGIVHRDVKP  283 (566)
T ss_pred             ccCCceEEEEEecCCCcHHHHHHhcCCchhHHHHhccchhhccccchhhHHHHHHHH-HHHHHHHHHHHHCCEEeCcCCH
Confidence            45667899999999999876421                            134566 79999999999988       5


Q ss_pred             CCe--------EEEecCCccc------------ccccccccCCCCccccccC---------------------CCCchhH
Q psy7174         107 ALL--------KKFVGIGIGR------------HVCTLYCTRGAPELLFGAR---------------------MYGVGID  145 (188)
Q Consensus       107 ~~i--------lkl~dfg~~~------------~~~~~~y~~~aPe~~~~~~---------------------~~~~~~D  145 (188)
                      +||        +||+|||++.            ..+++.|  +|||.+....                     .++.++|
T Consensus       284 ~NILl~~~~~~~KL~DFGlA~~l~~~~~~~~~~~~~t~~Y--~APE~~~~~~~~~~~~~~~~~~~~sp~l~~~~~~~k~D  361 (566)
T PLN03225        284 QNIIFSEGSGSFKIIDLGAAADLRVGINYIPKEFLLDPRY--AAPEQYIMSTQTPSAPSAPVATALSPVLWQLNLPDRFD  361 (566)
T ss_pred             HHEEEeCCCCcEEEEeCCCccccccccccCCcccccCCCc--cChHHhhccCCCCCCccccccccccchhccccCCCCcc
Confidence            555        5999999864            3467789  9999763221                     1345679


Q ss_pred             HHHHHHHHHHHHhCCCCC
Q psy7174         146 MWAVGCIICELLLKAPFL  163 (188)
Q Consensus       146 iwslG~il~el~~g~~pf  163 (188)
                      |||+||++|||+++..++
T Consensus       362 VwSlGviL~el~~~~~~~  379 (566)
T PLN03225        362 IYSAGLIFLQMAFPNLRS  379 (566)
T ss_pred             cHHHHHHHHHHHhCcCCC
Confidence            999999999999865543

>PLN03224 probable serine/threonine protein kinase; Provisional

Probab=99.69  E-value=2e-16  Score=131.93  Aligned_cols=131  Identities=18%  Similarity=0.240  Sum_probs=92.5

Q ss_pred             HHHHHHHHHhCCCCCe-----eEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------------------
Q psy7174          31 AKAEGKQDRRLDYANI-----IQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------------------   84 (188)
Q Consensus        31 ~~~E~~il~~l~h~ni-----v~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------------------   84 (188)
                      ...|+..+.+++|.++     ++++++|..............++|+||+.+++|.++..                     
T Consensus       219 ~~vE~~~l~~l~~~~l~~~~~~~~lg~~~~~~~~g~~~~~~~~LV~Ey~~~gsL~~~L~~~~~~~~~~L~e~l~~g~~l~  298 (507)
T PLN03224        219 GMVEAYMCAKIKRNPIAAASCAEYLGYFTSNTADGAFTKGSQWLVWKFESDATLGDALDGKLGPFPGCLEEFMMAGKKIP  298 (507)
T ss_pred             hHHHHHHHHHhhcccchhhhhhhhhhhcccccccccccCCceEEEEEcCCCCcHHHHHhhccCCCcchHHHHHhcCCchh
Confidence            3457777788876554     67777764433223344567899999999999876421                     


Q ss_pred             -----------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------ccccccc
Q psy7174          85 -----------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLYCT  127 (188)
Q Consensus        85 -----------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~y~  127 (188)
                                 .+..++ .|+++||.|||+.+       |+|+       +|++|||++..            .+++.| 
T Consensus       299 ~~~~~~~~~~~~~~~i~-~ql~~aL~~lH~~~ivHrDLKp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~g~~tp~Y-  376 (507)
T PLN03224        299 DNMPQDKRDINVIKGVM-RQVLTGLRKLHRIGIVHRDIKPENLLVTVDGQVKIIDFGAAVDMCTGINFNPLYGMLDPRY-  376 (507)
T ss_pred             hhcccccCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCchHhEEECCCCcEEEEeCcCccccccCCccCccccCCCcce-
Confidence                       234455 79999999999987       6666       59999998642            225679 


Q ss_pred             CCCCccccccCC-------------------C--CchhHHHHHHHHHHHHHhCCC-CCC
Q psy7174         128 RGAPELLFGARM-------------------Y--GVGIDMWAVGCIICELLLKAP-FLP  164 (188)
Q Consensus       128 ~~aPe~~~~~~~-------------------~--~~~~DiwslG~il~el~~g~~-pf~  164 (188)
                       +|||.+.....                   |  ..+.|+||+||++++|+++.. |+.
T Consensus       377 -~aPE~l~~~~~~~~~~~~~~~~~l~~~~~~yg~~~~~DvwSlGvil~em~~~~l~p~~  434 (507)
T PLN03224        377 -SPPEELVMPQSCPRAPAPAMAALLSPFAWLYGRPDLFDSYTAGVLLMQMCVPELRPVA  434 (507)
T ss_pred             -eChhhhcCCCCCCccchhhhhhhhhhhHHhcCCCCccchhhHHHHHHHHHhCCCCCcc
Confidence             99998753210                   1  134799999999999999864 664

>KOG1345|consensus

Probab=99.69  E-value=9.6e-18  Score=126.66  Aligned_cols=128  Identities=17%  Similarity=0.156  Sum_probs=101.5

Q ss_pred             hhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        28 ~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~   99 (188)
                      ..+|.+|..---.|. |.||+.-|++       .++..+..+.++||++.|+|..-       +...+.+. +|+++|++
T Consensus        64 ~~dF~rEfhY~~~Ls~H~hIi~tY~v-------aFqt~d~YvF~qE~aP~gdL~snv~~~GigE~~~K~v~-~ql~SAi~  135 (378)
T KOG1345|consen   64 QADFVREFHYSFFLSPHQHIIDTYEV-------AFQTSDAYVFVQEFAPRGDLRSNVEAAGIGEANTKKVF-AQLLSAIE  135 (378)
T ss_pred             HHHHHHHhccceeeccchhhhHHHHH-------HhhcCceEEEeeccCccchhhhhcCcccccHHHHHHHH-HHHHHHHH
Confidence            467888887655565 8999999886       34556677889999999999873       45677788 89999999


Q ss_pred             HHhhcC-------CCCe---------EEEecCCcccccccc--------cccCCCCcccccc---C-CCCchhHHHHHHH
Q psy7174         100 ALKSSM-------PALL---------KKFVGIGIGRHVCTL--------YCTRGAPELLFGA---R-MYGVGIDMWAVGC  151 (188)
Q Consensus       100 ~lH~~~-------~~~i---------lkl~dfg~~~~~~~~--------~y~~~aPe~~~~~---~-~~~~~~DiwslG~  151 (188)
                      |||+++       -+||         +|+||||.++..|+.        .|  -+||++...   . ..++.+|+|.||+
T Consensus       136 fMHsknlVHRdlK~eNiLif~~df~rvKlcDFG~t~k~g~tV~~~~~~~~y--~~pe~~~~~~ne~~~~~ps~D~WqfGI  213 (378)
T KOG1345|consen  136 FMHSKNLVHRDLKAENILIFDADFYRVKLCDFGLTRKVGTTVKYLEYVNNY--HAPELCDTVVNEKLVVNPSTDIWQFGI  213 (378)
T ss_pred             HhhccchhhcccccceEEEecCCccEEEeeecccccccCceehhhhhhccc--CCcHHHhhccccceEecccccchheee
Confidence            999998       4455         599999999877753        45  688876422   1 1357899999999


Q ss_pred             HHHHHHhCCCCCCC
Q psy7174         152 IICELLLKAPFLPG  165 (188)
Q Consensus       152 il~el~~g~~pf~~  165 (188)
                      +++.+++|.+|++.
T Consensus       214 i~f~cltG~~PWQk  227 (378)
T KOG1345|consen  214 IFFYCLTGKFPWQK  227 (378)
T ss_pred             eeeeeecCCCcchh
Confidence            99999999999974

>PLN00181 protein SPA1-RELATED; Provisional

Probab=99.67  E-value=5.9e-17  Score=142.57  Aligned_cols=121  Identities=18%  Similarity=0.145  Sum_probs=87.6

Q ss_pred             HhCCC-CCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC---
Q psy7174          39 RRLDY-ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGLQALKSSM---  105 (188)
Q Consensus        39 ~~l~h-~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~---  105 (188)
                      +.++| .||.++++.|..... ........+.++|++ +++|..+.         ..+..++ +||++||.|||+++   
T Consensus        27 ~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~e~~-~~~L~~~l~~~~~~~~~~~~~~i~-~qi~~al~~lH~~gIvH  103 (793)
T PLN00181         27 KSLSHIDYVRSLLGSHKEGNL-DGLDDDSIVRALECE-DVSLRQWLDNPDRSVDAFECFHVF-RQIVEIVNAAHSQGIVV  103 (793)
T ss_pred             chhhHHHHHHHhhcccCCccc-cccccchhhhhhccC-CccHHHHHhcccccccHHHHHHHH-HHHHHHHHHHHhCCeee
Confidence            45556 588888886522111 112334556677766 55776653         3466677 89999999999998   


Q ss_pred             ----CCCeE--------------------------EEecCCccc---------------------------ccccccccC
Q psy7174         106 ----PALLK--------------------------KFVGIGIGR---------------------------HVCTLYCTR  128 (188)
Q Consensus       106 ----~~~il--------------------------kl~dfg~~~---------------------------~~~~~~y~~  128 (188)
                          |+||+                          |++|||+++                           ..||++|  
T Consensus       104 rDlKP~NiLl~~~~~~k~~d~~~~~~~~~~~~~~~ki~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y--  181 (793)
T PLN00181        104 HNVRPSCFVMSSFNHVSFIESASCSDSGSDEDATTKSREIGSSRREEILSERRIEKLEEVKKQPFPMKQILAMEMSWY--  181 (793)
T ss_pred             ccCCchhEEEcccCcEEEeeccccCcccccccCcccccccccccccccccccchhhhhccccCCCcccccccCCCcce--
Confidence                77764                          466777643                           2367789  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      +|||++.+.. |+.++|||||||++|||+++.+|+..
T Consensus       182 ~APE~~~~~~-~~~~sDVwSlGviL~ELl~~~~~~~~  217 (793)
T PLN00181        182 TSPEEDNGSS-SNCASDVYRLGVLLFELFCPVSSREE  217 (793)
T ss_pred             EChhhhccCC-CCchhhhhhHHHHHHHHhhCCCchhh
Confidence            9999998766 89999999999999999999888753

>cd00180 PKc Catalytic domain of Protein Kinases

Probab=99.67  E-value=4.9e-15  Score=108.77  Aligned_cols=137  Identities=23%  Similarity=0.341  Sum_probs=105.5

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------HHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------HLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|++.++.++|++++++++++        ......++++|++.++++..+..         .+..++ .+++.++
T Consensus        35 ~~~~~~e~~~~~~l~~~~i~~~~~~~--------~~~~~~~~~~e~~~~~~l~~~~~~~~~~~~~~~~~~~~-~~l~~~l  105 (215)
T cd00180          35 LEELLREIEILKKLNHPNIVKLYGVF--------EDENHLYLVMEYCEGGSLKDLLKENEGKLSEDEILRIL-LQILEGL  105 (215)
T ss_pred             HHHHHHHHHHHHhcCCCCeeeEeeee--------ecCCeEEEEEecCCCCcHHHHHHhccCCCCHHHHHHHH-HHHHHHH
Confidence            47789999999999999999999975        33467899999999899887632         244555 7999999


Q ss_pred             HHHhhcC--------------C-CCeEEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174          99 QALKSSM--------------P-ALLKKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus        99 ~~lH~~~--------------~-~~ilkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      .+||+.+              + +.-++++|||...           ..+...|  .+||.......++.+.|+|++|++
T Consensus       106 ~~lh~~~~~H~dl~~~ni~~~~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~~~~--~~pe~~~~~~~~~~~~D~~~lg~~  183 (215)
T cd00180         106 EYLHSNGIIHRDLKPENILLDSDNGKVKLADFGLSKLLTSDKSLLKTIVGTPAY--MAPEVLLGKGYYSEKSDIWSLGVI  183 (215)
T ss_pred             HHHHhCCeeccCCCHhhEEEeCCCCcEEEecCCceEEccCCcchhhcccCCCCc--cChhHhcccCCCCchhhhHHHHHH
Confidence            9999988              2 3447999999754           2245567  899998765247899999999999


Q ss_pred             HHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         153 ICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       153 l~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ++++             ..+..++..+..+.|++.|
T Consensus       184 ~~~l-------------~~~~~~l~~~l~~~p~~R~  206 (215)
T cd00180         184 LYEL-------------PELKDLIRKMLQKDPEKRP  206 (215)
T ss_pred             HHHH-------------HHHHHHHHHHhhCCcccCc
Confidence            9999             4555555555556665543

Protein Kinases (PKs), catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The PK family is part of a larger superfamily that includes the catalytic domains of RIO kinases, aminoglycoside phosphotransferase, choline kinase, phosphoinositide 3-kinase (PI3K), and actin-fragmin kinase. PKs make up a large family of serine/threonine kinases, protein tyrosine kinases (PTKs), and dual-specificity PKs that phosphorylate both serine/threonine and tyrosine residues of target proteins. Majority of protein phosphorylation, about 95%, occurs on serine residues while only 1% occurs on tyrosine residues. Protein phosphorylation is a mechanism by which a wide variety of cellular proteins, such as enzymes and membrane channels, are reversibly regulated in response to certain stimuli. PKs often function as components of signal transduction pathways in which

>KOG0195|consensus

Probab=99.65  E-value=4.4e-16  Score=118.04  Aligned_cols=150  Identities=16%  Similarity=0.152  Sum_probs=111.8

Q ss_pred             ccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-----------HHHHH
Q psy7174          20 MARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-----------SHLRY   88 (188)
Q Consensus        20 i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-----------~~~~~   88 (188)
                      +..++.....+|..|.--|+.+.||||+.+++.|        .....+.++..|++.|+|..+.           +.+++
T Consensus       223 vr~~t~risrdfneefp~lrifshpnilpvlgac--------nsppnlv~isq~mp~gslynvlhe~t~vvvd~sqav~f  294 (448)
T KOG0195|consen  223 VREVTARISRDFNEEFPALRIFSHPNILPVLGAC--------NSPPNLVIISQYMPFGSLYNVLHEQTSVVVDHSQAVRF  294 (448)
T ss_pred             hhhcchhhcchhhhhCcceeeecCCchhhhhhhc--------cCCCCceEeeeeccchHHHHHHhcCccEEEecchHHHH
Confidence            3346677778899999999999999999999987        4456789999999999998862           33444


Q ss_pred             HHHHHHHHHHHHHhhcC---CCCe---------------EEEecCCccc----ccccccccCCCCccccccCC--CCchh
Q psy7174          89 LENQQILEGLQALKSSM---PALL---------------KKFVGIGIGR----HVCTLYCTRGAPELLFGARM--YGVGI  144 (188)
Q Consensus        89 ~~~~qi~~gl~~lH~~~---~~~i---------------lkl~dfg~~~----~~~~~~y~~~aPe~~~~~~~--~~~~~  144 (188)
                      .  .+++.|+.|||+-.   |..-               +..+|--++.    ..-.+.+  ++||.++..+.  --..+
T Consensus       295 a--ldiargmaflhslep~ipr~~lns~hvmidedltarismad~kfsfqe~gr~y~paw--mspealqrkped~n~raa  370 (448)
T KOG0195|consen  295 A--LDIARGMAFLHSLEPMIPRFYLNSKHVMIDEDLTARISMADTKFSFQEVGRAYSPAW--MSPEALQRKPEDLNIRAA  370 (448)
T ss_pred             H--HHHHhhHHHHhhcchhhhhhhcccceEEecchhhhheecccceeeeeccccccCccc--CCHHHHhcCchhcchhhh
Confidence            4  49999999999976   2111               1122222221    2234566  89999976542  12579


Q ss_pred             HHHHHHHHHHHHHhCCCCCCCCChHHHHHHH-HhhcCC
Q psy7174         145 DMWAVGCIICELLLKAPFLPGESDLDQLTRI-FQTLGT  181 (188)
Q Consensus       145 DiwslG~il~el~~g~~pf~~~~~~~~~~~i-~~~~~~  181 (188)
                      |+|||.+++||+-+...||...+++++-.+| +++++.
T Consensus       371 dmwsfaillwel~trevpfadlspmecgmkialeglrv  408 (448)
T KOG0195|consen  371 DMWSFAILLWELNTREVPFADLSPMECGMKIALEGLRV  408 (448)
T ss_pred             hHHHHHHHHHHhhccccccccCCchhhhhhhhhccccc
Confidence            9999999999999999999999999998887 445553

>KOG0603|consensus

Probab=99.51  E-value=2.4e-14  Score=118.58  Aligned_cols=133  Identities=17%  Similarity=0.186  Sum_probs=108.6

Q ss_pred             hhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ..++...|..++..++ ||.+++++-.|        +.+...++++++..+|++..-        +...+.+. ..++-+
T Consensus        39 ~~~~t~~er~il~~~~~~~f~v~lhyaf--------qt~~kl~l~ld~~rgg~lft~l~~~~~f~~~~~~~~~-aelaLa  109 (612)
T KOG0603|consen   39 DRTHTKQERIILAFVHNTPFLVKLHYAF--------QTDGKLYLILDFLRGGDLFTRLSKEVMFDELDVAFYL-AELALA  109 (612)
T ss_pred             cccccccHHHHHhhccCCCceeeeeeee--------ccccchhHhhhhcccchhhhccccCCchHHHHHHHHH-HHHHHH
Confidence            3346677999999998 99999998864        667889999999999887651        34455566 689999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc-------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                      ++++|+.+       ++|+       +|+.|||+++       .+||..|  ||||++.  . +...+|+||+|++++|+
T Consensus       110 ld~lh~l~iiyrd~k~enilld~~Ghi~~tdfglske~v~~~~~cgt~ey--mApEI~~--g-h~~a~D~ws~gvl~fel  184 (612)
T KOG0603|consen  110 LDHLHKLGIAYRDYKLENVLLLLEGHIKLTDFGLSKEAVKEKIACGTYEY--RAPEIIN--G-HLSAADWWSFGVLAFEL  184 (612)
T ss_pred             HhhcchhHHHHhcccccceeecccCccccCCchhhhHhHhhhhcccchhh--hhhHhhh--c-cCCcccchhhhhhHHHH
Confidence            99999987       5555       5999999865       4679999  9999997  2 78899999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHh
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++|..||.+    +...+|..
T Consensus       185 ltg~~pf~~----~~~~~Il~  201 (612)
T KOG0603|consen  185 LTGTLPFGG----DTMKRILK  201 (612)
T ss_pred             hhCCCCCch----HHHHHHhh
Confidence            999999988    55555554

>KOG1023|consensus

Probab=99.41  E-value=4.2e-13  Score=110.44  Aligned_cols=117  Identities=21%  Similarity=0.299  Sum_probs=91.3

Q ss_pred             HHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------HHHHHHHHHHHHHHHHHhhcC---
Q psy7174          38 DRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------HLRYLENQQILEGLQALKSSM---  105 (188)
Q Consensus        38 l~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------~~~~~~~~qi~~gl~~lH~~~---  105 (188)
                      |+.+.|.|+++|+|.+        .++...+++.+||.+|++.+...         -...++ +++++||.|+|+..   
T Consensus         1 l~~l~h~n~~~f~g~~--------~~~~~~~~i~~~c~rGsl~D~i~~~~~~~d~~F~~s~~-rdi~~Gl~ylh~s~i~~   71 (484)
T KOG1023|consen    1 LRQLDHDNLNKFIGAS--------VDGPEMIVIWEYCSRGSLLDILSNEDIKLDYFFILSFI-RDISKGLAYLHNSPIGY   71 (484)
T ss_pred             CcccchhhhhhheeeE--------ecCCceEEEEeeecCccHHhHHhccccCccHHHHHHHH-HHHHHHHHHHhcCccee
Confidence            4678899999999976        55688899999999999998632         133345 89999999999976   


Q ss_pred             -----CCC-------eEEEecCCcccccc-------------cccccCCCCccccccC--C----CCchhHHHHHHHHHH
Q psy7174         106 -----PAL-------LKKFVGIGIGRHVC-------------TLYCTRGAPELLFGAR--M----YGVGIDMWAVGCIIC  154 (188)
Q Consensus       106 -----~~~-------ilkl~dfg~~~~~~-------------~~~y~~~aPe~~~~~~--~----~~~~~DiwslG~il~  154 (188)
                           ..|       .+|++|||+.....             ...|  .|||.+....  .    .+.+.|+||+|++++
T Consensus        72 hg~l~s~nClvd~~w~lklt~~Gl~~~~~~~~~~~~~~~~~~~~lw--~aPellr~~~~~~~~~~~~~~gdiYs~~ii~~  149 (484)
T KOG1023|consen   72 HGALKSSNCLVDSRWVLKLTDFGLNSLLEETAEPEAHHPIRKALLW--TAPELLRGALSQSLESALTQKGDIYSFGIIMY  149 (484)
T ss_pred             eeeeccccceeeeeEEEEechhhhcccccccccccccchhHHHHhc--cCHHHhcccccccccccccccCCeehHHHHHH
Confidence                 222       27999999876542             1234  6999986531  1    467899999999999


Q ss_pred             HHHhCCCCCCC
Q psy7174         155 ELLLKAPFLPG  165 (188)
Q Consensus       155 el~~g~~pf~~  165 (188)
                      |+++.+.||..
T Consensus       150 ei~~r~~~~~~  160 (484)
T KOG1023|consen  150 EILFRSGPFDL  160 (484)
T ss_pred             HHHhccCcccc
Confidence            99999999976

>KOG0590|consensus

Probab=99.41  E-value=4.8e-14  Score=120.01  Aligned_cols=121  Identities=21%  Similarity=0.209  Sum_probs=94.2

Q ss_pred             HHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHHHHHh
Q psy7174          31 AKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGLQALK  102 (188)
Q Consensus        31 ~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH  102 (188)
                      +..|.-+-..++|||++..+..+.        +.....-.||||++ +|..+.        ..+..++ +|++.|++|+|
T Consensus       368 i~sE~~i~~~l~h~~~~e~l~~~~--------~~~~~~~~mE~~~~-Dlf~~~~~~~~~~~~e~~c~f-KqL~~Gv~y~h  437 (601)
T KOG0590|consen  368 ITSEFCIGSSLSHPNIIETLDIVQ--------EIDGILQSMEYCPY-DLFSLVMSNGKLTPLEADCFF-KQLLRGVKYLH  437 (601)
T ss_pred             hhhheeecccccCCchhhhHHHHh--------hcccchhhhhcccH-HHHHHHhcccccchhhhhHHH-HHHHHHHHHHH
Confidence            455777778899999988877642        22233333999999 776642        3456677 89999999999


Q ss_pred             hcC-------CCCe-------EEEecCCccc---------------ccccccccCCCCccccccCCCC-chhHHHHHHHH
Q psy7174         103 SSM-------PALL-------KKFVGIGIGR---------------HVCTLYCTRGAPELLFGARMYG-VGIDMWAVGCI  152 (188)
Q Consensus       103 ~~~-------~~~i-------lkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~~~~~-~~~DiwslG~i  152 (188)
                      +.|       ++|+       +||+|||...               .+|+..|  +|||++.... |+ ...||||.|++
T Consensus       438 ~~GiahrdlK~enll~~~~g~lki~Dfg~~~vf~~~~e~~~~~~~g~~gS~pY--~apE~~~~~~-ydpr~vDiwS~~ii  514 (601)
T KOG0590|consen  438 SMGLAHRDLKLENLLVTENGILKIIDFGAASVFRYPWEKNIHESSGIVGSDPY--LAPEVLTGKE-YDPRAVDVWSCGII  514 (601)
T ss_pred             hcCceeccCccccEEEecCCceEEeecCcceeeccCcchhhhhhcCcccCCcC--cCcccccccc-cCcchhhhhhccce
Confidence            999       4444       7999999643               5678889  9999998866 65 57999999999


Q ss_pred             HHHHHhCCCCCC
Q psy7174         153 ICELLLKAPFLP  164 (188)
Q Consensus       153 l~el~~g~~pf~  164 (188)
                      +..|.+|+.||.
T Consensus       515 ~~~m~~~~~~Wk  526 (601)
T KOG0590|consen  515 YICMILGRFPWK  526 (601)
T ss_pred             EEEEecCCCccc
Confidence            999999999984

>PRK09188 serine/threonine protein kinase; Provisional

Probab=99.40  E-value=1.1e-12  Score=105.48  Aligned_cols=117  Identities=10%  Similarity=-0.058  Sum_probs=81.6

Q ss_pred             cccccc-cCCc-cc-cccccccc--------hhhhhHHHHHHHHHHhCCCCCeeE-EeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-QSKW-SP-NTPMARCD--------VNVETQAKAEGKQDRRLDYANIIQ-YLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~~~~-~~-~~~i~~~~--------~~~~~~~~~E~~il~~l~h~niv~-~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+ ..+. .. .+++|+..        ....+.+.+|+++|++++|+|+++ +++.            ...+++||
T Consensus        31 fg~Vy~a~~~~~~~~~vAiK~~~~~~~~~~~~~~~~~~~~E~~iL~~L~h~~iv~~l~~~------------~~~~LVmE   98 (365)
T PRK09188         31 FSTVERGYFAGDPGTARAVRRRVSEVPWWSKPLARHLAAREIRALKTVRGIGVVPQLLAT------------GKDGLVRG   98 (365)
T ss_pred             cEEEEEEEEcCCCCeEEEEEEecccccccccHHHHHHHHHHHHHHHhccCCCCCcEEEEc------------CCcEEEEE
Confidence            788887 2221 12 34555421        123456899999999999999985 5442            24799999


Q ss_pred             ccccccHHHHHH-HHHHHHHHHHHHHHHHHhhcC--------CCCe-------EEEecCCccc-----------------
Q psy7174          73 IFTKTTKARFYS-HLRYLENQQILEGLQALKSSM--------PALL-------KKFVGIGIGR-----------------  119 (188)
Q Consensus        73 ~~~~~~l~~~~~-~~~~~~~~qi~~gl~~lH~~~--------~~~i-------lkl~dfg~~~-----------------  119 (188)
                      |+.+++|..... ....++ .|+++||.|||+++        |+|+       +||+|||+++                 
T Consensus        99 ~~~G~~L~~~~~~~~~~~~-~~i~~aL~~lH~~gIiHrDL~KP~NILv~~~~~ikLiDFGlA~~~~~~~~~~~~~~~~d~  177 (365)
T PRK09188         99 WTEGVPLHLARPHGDPAWF-RSAHRALRDLHRAGITHNDLAKPQNWLMGPDGEAAVIDFQLASVFRRRGALYRIAAYEDL  177 (365)
T ss_pred             ccCCCCHHHhCccchHHHH-HHHHHHHHHHHHCCCeeCCCCCcceEEEcCCCCEEEEECccceecccCcchhhhhhhhhh
Confidence            999999975321 123456 79999999999987        5666       4999999865                 


Q ss_pred             --ccccccccCCCCccccc
Q psy7174         120 --HVCTLYCTRGAPELLFG  136 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~  136 (188)
                        ..++..|  .|||.+..
T Consensus       178 ~~~~~~~~~--~~pe~~~~  194 (365)
T PRK09188        178 RHLLKHKRT--YAPDALTP  194 (365)
T ss_pred             hhhhccCcc--CCcccCCh
Confidence              2345567  79998854

>PRK10359 lipopolysaccharide core biosynthesis protein; Provisional

Probab=99.40  E-value=3e-13  Score=102.03  Aligned_cols=121  Identities=9%  Similarity=0.060  Sum_probs=84.0

Q ss_pred             HHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhhcC-----
Q psy7174          31 AKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSM-----  105 (188)
Q Consensus        31 ~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~~~-----  105 (188)
                      +.+|++.+.+++||+|....+++..............+++|||++|.++.++........ .+++.++..+|+.+     
T Consensus        82 ~e~Ea~~l~rL~~~GI~~~~d~~~~~~~~~~~~~~~~~lvmEyi~G~tL~~~~~~~~~~~-~~i~~~l~~lH~~gi~H~D  160 (232)
T PRK10359         82 YENLIVQTDRVRSEGLASLNDFYLLAERKTLRYAHTYIMLIEYIEGVELNDMPEISEDVK-AKIKASIESLHQHGMVSGD  160 (232)
T ss_pred             HHHHHHHHHHHHHCCCCcceEeeeecccccccccCCeEEEEEEECCccHHHhhhccHHHH-HHHHHHHHHHHHcCCccCC
Confidence            578999999999999999988643211101112346799999999999987643223345 69999999999988     


Q ss_pred             --CCCe------EEEecCCcccccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         106 --PALL------KKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       106 --~~~i------lkl~dfg~~~~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                        |+|+      ++++|||..+....  -  .|-+.+.-...|+-++|+||||+++.-.
T Consensus       161 ikp~Nili~~~gi~liDfg~~~~~~e--~--~a~d~~vler~y~~~~di~~lg~~~~~~  215 (232)
T PRK10359        161 PHKGNFIVSKNGLRIIDLSGKRCTAQ--R--KAKDRIDLERHYGIKNEIKDLGYYLLIY  215 (232)
T ss_pred             CChHHEEEeCCCEEEEECCCcccccc--h--hhHHHHHHHhHhcccccccceeEeehHH
Confidence              5555      68999997653321  1  2333333333477899999999987655

>COG0515 SPS1 Serine/threonine protein kinase [General function prediction only / Signal transduction mechanisms / Transcription / DNA replication, recombination, and repair]

Probab=99.34  E-value=1e-10  Score=90.65  Aligned_cols=153  Identities=22%  Similarity=0.282  Sum_probs=113.7

Q ss_pred             cccccc--cCCccccccccccch---hhhhHHHHHHHHHHhCCCC-CeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ--QSKWSPNTPMARCDV---NVETQAKAEGKQDRRLDYA-NIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~~~---~~~~~~~~E~~il~~l~h~-niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.|+.  ..+..+++.+.....   ...+.+.+|+++++.+.|+ +|+++.+.+        ......+++++++.+++
T Consensus        13 ~~~v~~~~~~~~~~~k~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~i~~~~~~~--------~~~~~~~~~~~~~~~~~   84 (384)
T COG0515          13 FGEVYLARDRKLVALKVLAKKLESKSKEVERFLREIQILASLNHPPNIVKLYDFF--------QDEGSLYLVMEYVDGGS   84 (384)
T ss_pred             CeEEEEEEeccEEEEEeechhhccchhHHHHHHHHHHHHHHccCCcceeeEEEEE--------ecCCEEEEEEecCCCCc
Confidence            355555  222223555555321   2467889999999999988 799999975        22334799999999999


Q ss_pred             HHHHHH-----------HHHHHHHHHHHHHHHHHhhcC-------CCC--------eEEEecCCccc-------------
Q psy7174          79 KARFYS-----------HLRYLENQQILEGLQALKSSM-------PAL--------LKKFVGIGIGR-------------  119 (188)
Q Consensus        79 l~~~~~-----------~~~~~~~~qi~~gl~~lH~~~-------~~~--------ilkl~dfg~~~-------------  119 (188)
                      +..+..           ....+. .|++.++.|+|+.+       |+|        .++++|||.+.             
T Consensus        85 l~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~~H~~~~~hrd~kp~nil~~~~~~~~~l~dfg~~~~~~~~~~~~~~~~  163 (384)
T COG0515          85 LEDLLKKIGRKGPLSESEALFIL-AQILSALEYLHSKGIIHRDIKPENILLDRDGRVVKLIDFGLAKLLPDPGSTSSIPA  163 (384)
T ss_pred             HHHHHHhcccccCCCHHHHHHHH-HHHHHHHHHHHhCCeeccCCCHHHeeecCCCCeEEEeccCcceecCCCCccccccc
Confidence            885422           345566 79999999999987       332        46999999632             


Q ss_pred             ----ccccccccCCCCcccccc--CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         120 ----HVCTLYCTRGAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       120 ----~~~~~~y~~~aPe~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                          ..++..|  ++||.+...  ..++...|+||+|+++++++.|..||.....
T Consensus       164 ~~~~~~~t~~~--~~pe~~~~~~~~~~~~~~D~~s~g~~~~~~~~~~~p~~~~~~  216 (384)
T COG0515         164 LPSTSVGTPGY--MAPEVLLGLSLAYASSSSDIWSLGITLYELLTGLPPFEGEKN  216 (384)
T ss_pred             ccccccccccc--CCHHHhcCCCCCCCCchHhHHHHHHHHHHHHhCCCCCCCCCc
Confidence                3567789  999999763  3488999999999999999999999877664

>PRK12274 serine/threonine protein kinase; Provisional

Probab=99.27  E-value=1.1e-10  Score=86.76  Aligned_cols=149  Identities=9%  Similarity=-0.077  Sum_probs=98.7

Q ss_pred             cccccccccCCcccccccccc---chh-----hhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           3 EVCFKPFQQSKWSPNTPMARC---DVN-----VETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         3 ~~~g~v~~~~~~~~~~~i~~~---~~~-----~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ++||.|+..++ -..+.+.+.   +..     ....+.+|+++|++|+ |+++.+++++            ...+++|||
T Consensus        13 ~~f~~v~~~~~-~~~k~~~~~l~~~~~~~~~~~~~l~~rE~~iL~~L~~~~~vP~ll~~------------~~~~lvmey   79 (218)
T PRK12274         13 DTFGRILLVRG-GERKFVRRDLSAAPWWLRGVAWWLARREALALRQLDGLPRTPRLLHW------------DGRHLDRSY   79 (218)
T ss_pred             CCcceEEEeec-CCceeeecccccchhhhhhHHHHHHHHHHHHHHhcCCCCCCCEEEEE------------cCEEEEEee
Confidence            57888887322 123333331   111     1225789999999996 5889999884            246999999


Q ss_pred             cccccHHHHHH-HHHHHHHHHHHHHHHHHhhcC--------CCCe-------EEEecCCccccc----------------
Q psy7174          74 FTKTTKARFYS-HLRYLENQQILEGLQALKSSM--------PALL-------KKFVGIGIGRHV----------------  121 (188)
Q Consensus        74 ~~~~~l~~~~~-~~~~~~~~qi~~gl~~lH~~~--------~~~i-------lkl~dfg~~~~~----------------  121 (188)
                      +.|.+|..... ....++ .|++.+|.++|+.|        |+|+       ++|+|||++...                
T Consensus        80 I~G~~L~~~~~~~~~~~~-~qi~~~L~~lH~~GIvHrDL~kp~NILv~~~g~i~LIDFG~A~~~~~~~~~~r~L~~rDl~  158 (218)
T PRK12274         80 LAGAAMYQRPPRGDLAYF-RAARRLLQQLHRCGVAHNDLAKEANWLVQEDGSPAVIDFQLAVRGNPRARWMRLLAREDLR  158 (218)
T ss_pred             ecCccHHhhhhhhhHHHH-HHHHHHHHHHHHCcCccCCCCCcceEEEcCCCCEEEEECCCceecCCcchHHHHHHHHHHH
Confidence            99999876421 223455 69999999999988        5676       489999986521                


Q ss_pred             --------ccccccCCCCccccccCCCC-chhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         122 --------CTLYCTRGAPELLFGARMYG-VGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       122 --------~~~~y~~~aPe~~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                              .++.+  ++|+.-.-....+ ...++.+.|.-+|.+.|+..+..+++
T Consensus       159 ~llk~~~~y~~~~--l~~~~~~~l~~~~~~~~~w~~~g~~~~~~~~~~~~~~~~~  211 (218)
T PRK12274        159 HLLKHKRMYCPAA--LTPVERRVLKRTSWIRELWFATGKPVYRFVTRRVLHWEDN  211 (218)
T ss_pred             HHHHHHHhcCCCC--CCHHHHhhhccchhHHHHHHHhcchHHHHHhccCCccccC
Confidence                    12333  4444322111133 45566699999999999998887654

>KOG4158|consensus

Probab=99.24  E-value=6.7e-11  Score=94.27  Aligned_cols=122  Identities=16%  Similarity=0.177  Sum_probs=82.4

Q ss_pred             CCCCeeEEeeecccccCC-------------------CCCCCCccEEEEeccccccHHHHH-------HHHHHHHHHHHH
Q psy7174          42 DYANIIQYLSLPVETLQP-------------------TTLSTSSDYIVVKIFTKTTKARFY-------SHLRYLENQQIL   95 (188)
Q Consensus        42 ~h~niv~~~~~~~~~~~~-------------------~~~~~~~~~iv~e~~~~~~l~~~~-------~~~~~~~~~qi~   95 (188)
                      +|||||++.++|..+.+.                   -.-....+|++|.-.... |..+.       ...+.++ .|++
T Consensus       274 ~HPNIvri~~aF~dsv~~lPda~~~YPdalp~R~~p~g~g~~~tlylvMkrY~~t-Lr~yl~~~~~s~r~~~~~l-aQlL  351 (598)
T KOG4158|consen  274 KHPNIVRIQTAFIDSVKVLPDAIERYPDALPARWYPSGAGEPKTLYLVMKRYRQT-LREYLWTRHRSYRTGRVIL-AQLL  351 (598)
T ss_pred             CCCCEEeehhhhhhhhccCCchhhhCcccccceecccccCCCceEEEehhcchhh-HHHHHhcCCCchHHHHHHH-HHHH
Confidence            599999999987654421                   011223447777766433 33321       1223344 6999


Q ss_pred             HHHHHHhhcC-------CCCe-----------EEEecCCccc-----------------ccccccccCCCCccccccCC-
Q psy7174          96 EGLQALKSSM-------PALL-----------KKFVGIGIGR-----------------HVCTLYCTRGAPELLFGARM-  139 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-----------lkl~dfg~~~-----------------~~~~~~y~~~aPe~~~~~~~-  139 (188)
                      +|+.|||+++       .+||           +.++|||..-                 .-|+...  +|||+....+. 
T Consensus       352 Eav~hL~~hgvAhRDlKSDNiL~ElddD~~P~LVvaDFGCcLAd~~hGlqlpy~S~~Vd~GGNa~l--mAPEi~ta~PGp  429 (598)
T KOG4158|consen  352 EAVTHLHKHGVAHRDLKSDNILLELDDDEIPQLVVADFGCCLADDNHGLQLPYESDEVDLGGNAKL--MAPEIATAVPGP  429 (598)
T ss_pred             HHHHHHHHccchhhcccccceEEEecCCCCcEEEEcccceeeeccccccccccccccccCCCccee--cchhhhhcCCCC
Confidence            9999999998       4455           5889999521                 2356667  99999754321 


Q ss_pred             ----CCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         140 ----YGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       140 ----~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                          --.++|.|+.|.+.||++....||.+..
T Consensus       430 ~avvny~kAD~WA~GalaYEIfg~~NPFY~rG  461 (598)
T KOG4158|consen  430 NAVVNYEKADTWAAGALAYEIFGRSNPFYKRG  461 (598)
T ss_pred             ceeeccchhhhhhhhhhHHHHhccCCcccccc
Confidence                1257999999999999999999998743

>KOG0606|consensus

Probab=99.19  E-value=2.6e-11  Score=105.90  Aligned_cols=93  Identities=23%  Similarity=0.333  Sum_probs=78.8

Q ss_pred             HHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------------------ccccccccCCCCc
Q psy7174          93 QILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------------------HVCTLYCTRGAPE  132 (188)
Q Consensus        93 qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------------------~~~~~~y~~~aPe  132 (188)
                      +.+.+++|||+.+       |+|+       .|++|||++.                          .+||+.|  .|||
T Consensus       151 dmvla~Eylh~ygivhrdlkpdnllIT~mGhiKlTDfgLsk~GLms~atnl~eg~I~k~t~Ef~dKqvcgTPey--iaPe  228 (1205)
T KOG0606|consen  151 DMVLAVEYLHSYGIVHRDLKPDNLLITSMGHIKLTDFGLSKKGLMSLATNLKEGHIEKDTHEFQDKQVCGTPEY--IAPE  228 (1205)
T ss_pred             hhhHHhHhhccCCeecCCCCCCcceeeecccccccchhhhhhhhhhccchhhhcchHHHHHHhhhccccCCccc--cChh
Confidence            5578899999988       6666       3999999732                          4789999  9999


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         133 LLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       133 ~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ++.... |+..+|+|++|+|+||.+-|..||.|+.+.+.+..++.....-++++|+
T Consensus       229 Vilrqg-ygkpvdwwamGiIlyeFLVgcvpffGdtpeelfg~visd~i~wpE~dea  283 (1205)
T KOG0606|consen  229 VILRQG-YGKPVDWWAMGIILYEFLVGCVPFFGDTPEELFGQVISDDIEWPEEDEA  283 (1205)
T ss_pred             hhhhhc-cCCCccHHHHHHHHHHHheeeeeccCCCHHHHHhhhhhhhccccccCcC
Confidence            998765 9999999999999999999999999999999998888766665555553

>KOG1033|consensus

Probab=99.11  E-value=4.5e-11  Score=97.71  Aligned_cols=89  Identities=27%  Similarity=0.440  Sum_probs=71.8

Q ss_pred             ccEEEEeccccccHHHHH-----------HHHHHHHHHHHHHHHHH---HhhcC-CCCe-------EEEecCCcc-----
Q psy7174          66 SDYIVVKIFTKTTKARFY-----------SHLRYLENQQILEGLQA---LKSSM-PALL-------KKFVGIGIG-----  118 (188)
Q Consensus        66 ~~~iv~e~~~~~~l~~~~-----------~~~~~~~~~qi~~gl~~---lH~~~-~~~i-------lkl~dfg~~-----  118 (188)
                      ..+|.|+.|..++|.++.           .....++ .|++.|++|   +|+.- |.||       +||.|||+.     
T Consensus       330 ~lyI~Mn~c~~~tledWl~rr~~~e~~s~s~~~~~~-~q~~~~~~yk~~ihrdlkp~nif~~~d~q~kIgDFgl~ts~~~  408 (516)
T KOG1033|consen  330 YLYIQMNLCEKETLEDWLRRRRTGEERSLSLMLDIF-KQIAPAVEYKGLIHRDLKPSNIFFSDDDQLKIGDFGLVTSQDK  408 (516)
T ss_pred             chhhhhhhhhhhhHHHHhhCCCcccccchhHHHHHH-Hhhccchhhccchhhhccccccccccchhhhhhhhhheeeccc
Confidence            578999999999999874           2344555 799999987   33322 5565       799999972     


Q ss_pred             ------------cccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh
Q psy7174         119 ------------RHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL  158 (188)
Q Consensus       119 ------------~~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~  158 (188)
                                  ..+||.+|  ++||.+.+.. |+.++|||+||++++|++.
T Consensus       409 ~~~~~~~~a~~t~~~gt~~Y--msPEQi~g~~-y~~kvdIyaLGlil~EL~~  457 (516)
T KOG1033|consen  409 DETVAPAAASHTQQVGTLLY--MSPEQIRGQQ-YSEKVDIYALGLILAELLI  457 (516)
T ss_pred             CCcccchhhhhhhccccccc--CCHHHHhhhh-hhhhcchhhHHHHHHHHHH
Confidence                        25689999  9999999865 9999999999999999987

>PRK10345 hypothetical protein; Provisional

Probab=99.09  E-value=5.5e-10  Score=83.60  Aligned_cols=106  Identities=17%  Similarity=0.142  Sum_probs=70.6

Q ss_pred             cccccccCCcccccccccc---chhhhhHHHHHHHHHHhC-----CCCCeeEEeeecccccCCCCCCCCccE-EEEec--
Q psy7174           5 CFKPFQQSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-----DYANIIQYLSLPVETLQPTTLSTSSDY-IVVKI--   73 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-----~h~niv~~~~~~~~~~~~~~~~~~~~~-iv~e~--   73 (188)
                      +|.||. +...+.++||..   .....+.+.+|+++++.+     +||||++++|++.+.     ......+ +++||  
T Consensus        15 ~~~Vy~-hp~~~~k~IKv~~~~~~~~~~~~~rEi~~l~~L~~~~~~h~nIvr~yg~~et~-----~g~g~v~~~I~e~~G   88 (210)
T PRK10345         15 HRKCYA-HPEDAQRCIKIVYHRGDGGDKEIRRELKYYAHLSRRLIDWSGIPRYYGTVETD-----CGTGYVYDVIADFDG   88 (210)
T ss_pred             ceEEEE-CCCCcCeEEEEEeccccchHHHHHHHHHHHHHhhccCCCCcccceeeEEEEeC-----CCCeEEEEEEecCCC
Confidence            567776 333444455553   223556789999999999     579999999986321     1122333 78999  


Q ss_pred             cccccHHHHHHH-----HHHHHHHHHHHHH-HHHhhcC-------CCCe-----------EEEec-CCc
Q psy7174          74 FTKTTKARFYSH-----LRYLENQQILEGL-QALKSSM-------PALL-----------KKFVG-IGI  117 (188)
Q Consensus        74 ~~~~~l~~~~~~-----~~~~~~~qi~~gl-~~lH~~~-------~~~i-----------lkl~d-fg~  117 (188)
                      +.+++|.++...     -...+ +|++.++ +|||+++       |+||           ++|+| ||.
T Consensus        89 ~~~~tL~~~l~~~~~~e~~~~~-~~~L~~l~~yLh~~~IvhrDlKp~NILl~~~~~~~~~~~LiDg~G~  156 (210)
T PRK10345         89 KPSITLTEFAEQCRYEEDVAQL-RQLLKKLKRYLLDNRIVTMELKPQNILCQRISESEVIPVVCDNIGE  156 (210)
T ss_pred             CcchhHHHHHHcccccHhHHHH-HHHHHHHHHHHHHCCEeecCCCHHHEEEeccCCCCCcEEEEECCCC
Confidence            558899876421     12334 6888777 9999998       5555           58889 444

>KOG1164|consensus

Probab=99.09  E-value=2.9e-09  Score=84.82  Aligned_cols=152  Identities=14%  Similarity=0.094  Sum_probs=102.8

Q ss_pred             cccccc-cC-C----ccccccccccchhhhhHHHHHHHHHHhCCC----CCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-QS-K----WSPNTPMARCDVNVETQAKAEGKQDRRLDY----ANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~~-~----~~~~~~i~~~~~~~~~~~~~E~~il~~l~h----~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||. .+ .    ..++|+...........+..|..++..+..    +++.++++...       ..+...++||+.+
T Consensus        31 fG~V~~v~~~~~~~~~~a~K~e~~~~~~~~~~l~~E~~vl~~l~~~~~~~~~~~~~~~G~-------~~~~~~~iVM~l~  103 (322)
T KOG1164|consen   31 FGAVYLVSDKSEKNKEYAKKLEKKELGSKPSVLKIEIQVLKKLEKKNGPSHFPKLLDHGR-------STEDFNFIVMSLL  103 (322)
T ss_pred             CceEEEEEecCCCCeeEEEEEEEecccCCCccchhHHHHHHHHhhhcCCCCCCEEEEecc-------CCCceeEEEEecc
Confidence            788887 21 1    222333333222222368889999998873    57888887520       3566789999977


Q ss_pred             ccccHHHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CC------------CeEEEecCCccc--c---
Q psy7174          75 TKTTKARFY----------SHLRYLENQQILEGLQALKSSM-------PA------------LLKKFVGIGIGR--H---  120 (188)
Q Consensus        75 ~~~~l~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~------------~ilkl~dfg~~~--~---  120 (188)
                       |.+|.++.          .....+. .|++.+|+++|+.|       |+            ..+.+.|||+++  .   
T Consensus       104 -G~sL~dl~~~~~~~~fs~~T~l~ia-~q~l~~l~~lH~~G~iHRDiKp~N~~~g~~~~~~~~~~~llDfGlar~~~~~~  181 (322)
T KOG1164|consen  104 -GPSLEDLRKRNPPGRFSRKTVLRIA-IQNLNALEDLHSKGFIHRDIKPENFVVGQSSRSEVRTLYLLDFGLARRFKYVG  181 (322)
T ss_pred             -CccHHHHHHhCCCCCcCHhHHHHHH-HHHHHHHHHHHhcCcccCCcCHHHeeecCCCCcccceEEEEecCCCccccccC
Confidence             55555532          2344455 69999999999998       22            347899999875  1   


Q ss_pred             ----------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         121 ----------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       121 ----------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                                      .||..|  .++.+-.+.. .+.+-|+||++-++.++..|..|+.+...
T Consensus       182 ~~~~~~~~~r~~~~~~rGT~ry--~S~~~H~~~e-~~r~DDles~~Y~l~el~~g~LPW~~~~~  242 (322)
T KOG1164|consen  182 DSGGNLRPPRPQKGLFRGTLRY--ASINVHLGIE-QGRRDDLESLFYMLLELLKGSLPWEALEM  242 (322)
T ss_pred             CCCcccccCCCCccCCCCcccc--ccHHHhCCCc-cCCchhhhhHHHHHHHHhcCCCCCccccc
Confidence                            155566  5555555543 78899999999999999999999976553

>cd05147 RIO1_euk RIO kinase family; eukaryotic RIO1, catalytic domain

Probab=98.91  E-value=2.4e-09  Score=79.01  Aligned_cols=81  Identities=17%  Similarity=0.066  Sum_probs=57.4

Q ss_pred             HHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHHH-h
Q psy7174          32 KAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQAL-K  102 (188)
Q Consensus        32 ~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~l-H  102 (188)
                      .+|++++.++.++++.....+          .....+++|||++++++...        ...+..++ .|++.+|.++ |
T Consensus        67 ~~E~~~l~~l~~~~v~~p~~~----------~~~~~~iVmE~i~g~~l~~~~~~~~~~~~~~~~~i~-~qi~~~L~~l~H  135 (190)
T cd05147          67 EKEMRNLKRLVTAGIPCPEPI----------LLKSHVLVMEFIGDDGWAAPRLKDAPLSESKARELY-LQVIQIMRILYQ  135 (190)
T ss_pred             HHHHHHHHHHHHCCCCCCcEE----------EecCCEEEEEEeCCCCCcchhhhcCCCCHHHHHHHH-HHHHHHHHHHHH
Confidence            459999999988776333221          01234899999998765432        23456666 7999999999 6


Q ss_pred             hcC-------CCCe------EEEecCCccccccc
Q psy7174         103 SSM-------PALL------KKFVGIGIGRHVCT  123 (188)
Q Consensus       103 ~~~-------~~~i------lkl~dfg~~~~~~~  123 (188)
                      +.+       |+|+      ++++|||++.....
T Consensus       136 ~~giiHrDlkP~NIli~~~~v~LiDFG~a~~~~~  169 (190)
T cd05147         136 DCRLVHADLSEYNLLYHDGKLYIIDVSQSVEHDH  169 (190)
T ss_pred             hCCcccCCCCHHHEEEECCcEEEEEccccccCCC
Confidence            877       7777      59999999865443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. This subfamily is composed of RIO1 proteins from eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle progression and c

>KOG1240|consensus

Probab=98.86  E-value=3.2e-09  Score=93.66  Aligned_cols=128  Identities=17%  Similarity=0.265  Sum_probs=91.8

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILE   96 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~   96 (188)
                      +....++-.+|++ ....+|||++++.-+-        ..++..|++-+|......+++       .-+.+|++ -|++.
T Consensus        62 sL~~~~qrL~~ik-~~l~~~pn~lPfqk~~--------~t~kAAylvRqyvkhnLyDRlSTRPFL~~iEKkWia-FQLL~  131 (1431)
T KOG1240|consen   62 SLRPFKQRLEEIK-FALMKAPNCLPFQKVL--------VTDKAAYLVRQYVKHNLYDRLSTRPFLVLIEKKWIA-FQLLK  131 (1431)
T ss_pred             CchHHHHHHHHHH-HHhhcCCcccchHHHH--------HhhHHHHHHHHHHhhhhhhhhccchHHHHHHHHHHH-HHHHH
Confidence            3444455566677 6778899999997642        446677888888876666553       34567777 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccc--------------cc----ccccccCCCCcccccc-------
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGR--------------HV----CTLYCTRGAPELLFGA-------  137 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~----~~~~y~~~aPe~~~~~-------  137 (188)
                      ||.-+|+.+       .+||       +-++||..-+              +.    .-.+|  .|||.+...       
T Consensus       132 al~qcH~~gVcHGDIKsENILiTSWNW~~LtDFAsFKPtYLPeDNPadf~fFFDTSrRRtCY--iAPERFv~~~~~~~~~  209 (1431)
T KOG1240|consen  132 ALSQCHKLGVCHGDIKSENILITSWNWLYLTDFASFKPTYLPEDNPADFTFFFDTSRRRTCY--IAPERFVSALGKTSVG  209 (1431)
T ss_pred             HHHHHHHcCccccccccceEEEeeechhhhhcccccCCccCCCCCcccceEEEecCCceeee--cChHhhhccccccccC
Confidence            999999988       4455       4788887421              11    12368  899987431       


Q ss_pred             ---CCCCchhHHHHHHHHHHHHHh-CCCCC
Q psy7174         138 ---RMYGVGIDMWAVGCIICELLL-KAPFL  163 (188)
Q Consensus       138 ---~~~~~~~DiwslG~il~el~~-g~~pf  163 (188)
                         +..+++-||+|+||++.|+++ |+|+|
T Consensus       210 q~~~~L~paMDIFS~GCViaELf~Eg~PlF  239 (1431)
T KOG1240|consen  210 QDAPLLTPAMDIFSAGCVIAELFLEGRPLF  239 (1431)
T ss_pred             CcccccChhhhhhhhhHHHHHHHhcCCCcc
Confidence               114678999999999999985 89999

>PRK09605 bifunctional UGMP family protein/serine/threonine protein kinase; Validated

Probab=98.85  E-value=1.4e-08  Score=86.26  Aligned_cols=83  Identities=12%  Similarity=0.119  Sum_probs=68.0

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhhcC---
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSM---  105 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~~~---  105 (188)
                      +++.+|+++++.++|++++....++        ......+++|||+.++++..+......++ .|++++|.+||+.+   
T Consensus       381 ~~~~~E~~~l~~l~~~~i~~p~~~~--------~~~~~~~lv~E~~~g~~L~~~l~~~~~~~-~~i~~~L~~lH~~giiH  451 (535)
T PRK09605        381 ERTRAEARLLSEARRAGVPTPVIYD--------VDPEEKTIVMEYIGGKDLKDVLEGNPELV-RKVGEIVAKLHKAGIVH  451 (535)
T ss_pred             HHHHHHHHHHHhhcccCCCeeEEEE--------EeCCCCEEEEEecCCCcHHHHHHHHHHHH-HHHHHHHHHHHhCCCcc
Confidence            5678999999999999988765543        23446789999999999988766566677 79999999999988   


Q ss_pred             ----CCCe------EEEecCCcccc
Q psy7174         106 ----PALL------KKFVGIGIGRH  120 (188)
Q Consensus       106 ----~~~i------lkl~dfg~~~~  120 (188)
                          |.|+      ++++|||+++.
T Consensus       452 rDlkp~NILl~~~~~~liDFGla~~  476 (535)
T PRK09605        452 GDLTTSNFIVRDDRLYLIDFGLGKY  476 (535)
T ss_pred             CCCChHHEEEECCcEEEEeCccccc
Confidence                7777      48999999754

>KOG1163|consensus

Probab=98.77  E-value=3.4e-08  Score=74.34  Aligned_cols=161  Identities=14%  Similarity=0.099  Sum_probs=103.5

Q ss_pred             ccccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhCCC-CCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           4 VCFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRLDY-ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         4 ~~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l~h-~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      .||+.|. .+-... -+|||-- +.....++..|.++-+.|++ ..|..+..+        ..+.....+|||.+ |.+|
T Consensus        27 SFGdIy~~~~i~~ge~VAiK~Es~~a~hpqL~yEskvY~iL~~g~GiP~i~~y--------~~e~~ynvlVMdLL-GPsL   97 (341)
T KOG1163|consen   27 SFGDIYLGISITSGEEVAIKLESSKAKHPQLLYESKVYRILQGGVGIPHIRHY--------GTEKDYNVLVMDLL-GPSL   97 (341)
T ss_pred             chhheeeeeeccCCceEEEEeecccCCCcchhHHHHHHHHhccCCCCchhhhh--------ccccccceeeeecc-CccH
Confidence            3677776 111111 3333332 23334678899999999985 444444443        25577889999987 6666


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc--------------
Q psy7174          80 ARFY---------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR--------------  119 (188)
Q Consensus        80 ~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~--------------  119 (188)
                      .++.         ..+.-++ .|++.-++|+|.++       |+|.          +-++|||++.              
T Consensus        98 EdLfnfC~R~ftmkTvLMLa-DQml~RiEyvH~r~fiHRDIKPdNFLMGlgrh~~kl~LIDFGLaKky~d~~t~~HIpyr  176 (341)
T KOG1163|consen   98 EDLFNFCSRRFTMKTVLMLA-DQMLSRIEYVHLRNFIHRDIKPDNFLMGLGRHCNKLYLIDFGLAKKYRDIRTRQHIPYR  176 (341)
T ss_pred             HHHHHHHhhhhhHHhHHHHH-HHHHHHHHHHHhhccccccCCccceeeccccccceEEEEeccchhhhccccccccCccc
Confidence            6642         2233344 79999999999988       7766          4789999864              


Q ss_pred             ----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---HHHHHHHHh
Q psy7174         120 ----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---LDQLTRIFQ  177 (188)
Q Consensus       120 ----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---~~~~~~i~~  177 (188)
                          ..||..|  .+-....+.. .+..-|+=|+|-++....-|..||+|...   .+-.++|.+
T Consensus       177 e~r~ltGTaRY--ASinAh~g~e-qSRRDDmeSvgYvLmYfnrG~LPWQglka~tk~QKyEkI~E  238 (341)
T KOG1163|consen  177 EDRNLTGTARY--ASINAHLGIE-QSRRDDMESVGYVLMYFNRGSLPWQGLKAATKKQKYEKISE  238 (341)
T ss_pred             cCCccceeeee--hhhhhhhhhh-hhhhhhhhhhcceeeeeecCCCcccccchhhHHHHHHHHHH
Confidence                3466666  3333333322 46677999999888888889999998654   333455544

>KOG1165|consensus

Probab=98.74  E-value=1.2e-07  Score=74.37  Aligned_cols=161  Identities=12%  Similarity=0.150  Sum_probs=112.5

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||..|+ .+-+.. -+|||-- ......++.-|-+.-+.|. .+.|-..+-+        ++.+.+..+|+|++ |.+|.
T Consensus        41 FG~lf~G~Nl~nne~VAIKfEPrkS~APQLrdEYr~YKlL~g~~GIP~vYYF--------GqeG~~NiLVidLL-GPSLE  111 (449)
T KOG1165|consen   41 FGVLFLGKNLYNNEPVAIKFEPRKSEAPQLRDEYRTYKLLGGTEGIPQVYYF--------GQEGKYNILVIDLL-GPSLE  111 (449)
T ss_pred             ceeeecccccccCceEEEEeccccCCcchHHHHHHHHHHHcCCCCCCceeee--------ccccchhhhhhhhh-CcCHH
Confidence            666676 333333 4444432 2334567888998888886 5777666542        36677888999987 56666


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CC------------CeEEEecCCccc-------------
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PA------------LLKKFVGIGIGR-------------  119 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~------------~ilkl~dfg~~~-------------  119 (188)
                      ++.         ..+.-++ .|++.-++|+|++.       |+            |++-++|||++.             
T Consensus       112 DLFD~CgR~FSvKTV~miA-~Qmi~rie~vH~k~LIYRDIKPdNFLIGrp~~k~~n~IhiiDFGmAK~YrDp~TkqHIPY  190 (449)
T KOG1165|consen  112 DLFDLCGRRFSVKTVAMIA-KQMITRIEYVHEKDLIYRDIKPDNFLIGRPGTKDANVIHIIDFGMAKEYRDPKTKQHIPY  190 (449)
T ss_pred             HHHHHhcCcccHHhHHHHH-HHHHHHHHHHHhcceeecccCccceeecCCCCCCCceEEEEeccchhhhcCccccccCcc
Confidence            542         3344455 79999999999998       44            446899999854             


Q ss_pred             -----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC---CChHHHHHHHHhh
Q psy7174         120 -----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG---ESDLDQLTRIFQT  178 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~---~~~~~~~~~i~~~  178 (188)
                           ..||..|  |+--.-++.. .+..-|+=|||-++...+-|..||+|   .+..+-.++|.+.
T Consensus       191 rE~KSLsGTARY--MSINTHlGrE-QSRRDDLEaLGHvFmYFLRGsLPWQGLKA~tnK~kYeKIGe~  254 (449)
T KOG1165|consen  191 REHKSLSGTARY--MSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLKADTNKEKYEKIGET  254 (449)
T ss_pred             ccccccccceee--eEeeccccch-hhhhhhHHHhhhhhhhhccCCCccccccCcchHHHHHHhccc
Confidence                 4678888  7766555543 67788999999999999999999987   4556667777543

>cd05145 RIO1_like RIO kinase family; RIO1, RIO3 and similar proteins, catalytic domain

Probab=98.72  E-value=5.3e-08  Score=71.80  Aligned_cols=80  Identities=13%  Similarity=0.089  Sum_probs=57.9

Q ss_pred             HHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHHHh
Q psy7174          31 AKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQALK  102 (188)
Q Consensus        31 ~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH  102 (188)
                      ..+|.+.+.+++|+++.....+.          ....+++|||++++++...        ......++ .|++.++.++|
T Consensus        66 ~~~E~~~l~~l~~~~i~~p~~~~----------~~~~~lVmE~~~g~~~~~~~l~~~~~~~~~~~~i~-~~l~~~l~~lH  134 (190)
T cd05145          66 AEKEFRNLKRLYEAGVPVPEPIL----------LKKNVLVMEFIGDDGSPAPRLKDVPLEEEEAEELY-EQVVEQMRRLY  134 (190)
T ss_pred             HHHHHHHHHHHHhCCCCCceEEE----------ecCCEEEEEEecCCCchhhhhhhccCCHHHHHHHH-HHHHHHHHHHH
Confidence            35799999999999874443321          1134899999998753221        23455666 79999999999


Q ss_pred             h-cC-------CCCe------EEEecCCccccc
Q psy7174         103 S-SM-------PALL------KKFVGIGIGRHV  121 (188)
Q Consensus       103 ~-~~-------~~~i------lkl~dfg~~~~~  121 (188)
                      + .+       |+|+      ++++|||++...
T Consensus       135 ~~~givHrDlkP~NIll~~~~~~liDFG~a~~~  167 (190)
T cd05145         135 QEAGLVHGDLSEYNILYHDGKPYIIDVSQAVEL  167 (190)
T ss_pred             HhCCEecCCCChhhEEEECCCEEEEEcccceec
Confidence            9 77       7777      489999987543

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO1 is present in archaea, bacteria and eukaryotes. In addition, RIO3 is present in multicellular eukaryotes. RIO1 is essential for survival and is required for 18S rRNA processing, proper cell cycle pro

>TIGR03724 arch_bud32 Kae1-associated kinase Bud32

Probab=98.70  E-value=6.7e-08  Score=71.43  Aligned_cols=83  Identities=12%  Similarity=0.127  Sum_probs=61.6

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHH-HHHHHHHHHHHHHHhhcC--
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLR-YLENQQILEGLQALKSSM--  105 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~-~~~~~qi~~gl~~lH~~~--  105 (188)
                      +++.+|+++++.++|+++.....++        ......+++|||++++++......-. .++ .|++.+|.+||+.+  
T Consensus        42 ~~~~~E~~~l~~l~~~~i~~p~~~~--------~~~~~~~lv~e~~~g~~l~~~~~~~~~~~~-~~i~~~l~~lH~~gi~  112 (199)
T TIGR03724        42 ERTRNEARLLSRARKAGVNTPVVYD--------VDPDNKTIVMEYIEGKPLKDVIEEGNDELL-REIGRLVGKLHKAGIV  112 (199)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCEEEE--------EECCCCEEEEEEECCccHHHHHhhcHHHHH-HHHHHHHHHHHHCCee
Confidence            5677899999999987644332221        23445689999999999987644322 456 79999999999988  


Q ss_pred             -----CCCe------EEEecCCcccc
Q psy7174         106 -----PALL------KKFVGIGIGRH  120 (188)
Q Consensus       106 -----~~~i------lkl~dfg~~~~  120 (188)
                           |.|+      ++++|||++..
T Consensus       113 H~Dl~~~Nil~~~~~~~liDfg~a~~  138 (199)
T TIGR03724       113 HGDLTTSNIIVRDDKLYLIDFGLGKY  138 (199)
T ss_pred             cCCCCcceEEEECCcEEEEECCCCcC
Confidence                 6676      58999998654

Members of this protein family are the Bud32 protein associated with Kae1 (kinase-associated endopeptidase 1) in the Archaea. In many Archaeal genomes, Kae1 and Bud32 are fused. The complex is homologous to the Kae1 and Bud32 subunits of the eukaryotic KEOPS complex, an apparently ancient protein kinase-containing molecular machine.

>PRK14879 serine/threonine protein kinase; Provisional

Probab=98.65  E-value=1.2e-07  Score=70.68  Aligned_cols=83  Identities=12%  Similarity=0.081  Sum_probs=64.1

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHH----HHHHHHHHHHHHHHHHhhc
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH----LRYLENQQILEGLQALKSS  104 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~----~~~~~~~qi~~gl~~lH~~  104 (188)
                      .++.+|++++..++|+++.....++        .+....+++|||+.++++..+...    ...++ .+++.+|.++|+.
T Consensus        44 ~~~~~E~~~l~~l~~~~i~~p~~~~--------~~~~~~~lv~e~~~G~~L~~~~~~~~~~~~~i~-~~i~~~l~~lH~~  114 (211)
T PRK14879         44 ERTRREARIMSRARKAGVNVPAVYF--------VDPENFIIVMEYIEGEPLKDLINSNGMEELELS-REIGRLVGKLHSA  114 (211)
T ss_pred             HHHHHHHHHHHHHHHCCCCCCeEEE--------EeCCCCEEEEEEeCCcCHHHHHHhccHHHHHHH-HHHHHHHHHHHhC
Confidence            4577899999999999876655543        234567899999999999876433    33555 7999999999998


Q ss_pred             C-------CCCe------EEEecCCcccc
Q psy7174         105 M-------PALL------KKFVGIGIGRH  120 (188)
Q Consensus       105 ~-------~~~i------lkl~dfg~~~~  120 (188)
                      +       |.|+      ++++|||.+..
T Consensus       115 ~i~H~Dl~p~Nil~~~~~~~liDf~~a~~  143 (211)
T PRK14879        115 GIIHGDLTTSNMILSGGKIYLIDFGLAEF  143 (211)
T ss_pred             CcccCCCCcccEEEECCCEEEEECCcccC
Confidence            7       6666      47999998754

>KOG1243|consensus

Probab=98.59  E-value=4.5e-07  Score=76.75  Aligned_cols=119  Identities=24%  Similarity=0.254  Sum_probs=79.9

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc--HHHH-HHHHHHHHHHHHHHHHHHHhh
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT--KARF-YSHLRYLENQQILEGLQALKS  103 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~--l~~~-~~~~~~~~~~qi~~gl~~lH~  103 (188)
                      ..+.+.+-++-|+.++||||++|++.+        ..+...|+++|-+.--.  +... ...+.+.+ .||+.||.|||+
T Consensus        52 ~~~~~~~A~k~lKtlRHP~Il~yL~t~--------e~~~~~ylvTErV~Pl~~~lk~l~~~~v~~Gl-~qIl~AL~FL~~  122 (690)
T KOG1243|consen   52 VTELAKRAVKRLKTLRHPNILSYLDTT--------EEEGTLYLVTERVRPLETVLKELGKEEVCLGL-FQILAALSFLND  122 (690)
T ss_pred             hhHHHHHHHHHhhhccCchhhhhhhhh--------cccCceEEEeeccccHHHHHHHhHHHHHHHHH-HHHHHHHHHHhc
Confidence            345577888999999999999999953        45668899999875333  2222 33456666 899999999987


Q ss_pred             cC---CCCeE------------EEecCCccc-ccccc----------cccCCCCccccccCCCCchhHHHHHHHHHHHHH
Q psy7174         104 SM---PALLK------------KFVGIGIGR-HVCTL----------YCTRGAPELLFGARMYGVGIDMWAVGCIICELL  157 (188)
Q Consensus       104 ~~---~~~il------------kl~dfg~~~-~~~~~----------~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~  157 (188)
                      .+   .+|+.            ||.+|-+.. .-++.          .|  ..|+.+...   +-..|.|-|||++++++
T Consensus       123 d~~lvHgNv~~~SVfVn~~GeWkLggle~v~~~~~~~~~~~~~~~~~s~--~~P~~~~~s---~~s~D~~~Lg~li~el~  197 (690)
T KOG1243|consen  123 DCNLVHGNVCKDSVFVNESGEWKLGGLELVSKASGFNAPAKSLYLIESF--DDPEEIDPS---EWSIDSWGLGCLIEELF  197 (690)
T ss_pred             cCCeeeccEeeeeEEEcCCCcEEEeeeEEEeccccCCcccccchhhhcc--cChhhcCcc---ccchhhhhHHHHHHHHh
Confidence            65   55553            566555421 11221          12  344433221   12359999999999999


Q ss_pred             hC
Q psy7174         158 LK  159 (188)
Q Consensus       158 ~g  159 (188)
                      .|
T Consensus       198 ng  199 (690)
T KOG1243|consen  198 NG  199 (690)
T ss_pred             Cc
Confidence            98

>KOG0590|consensus

Probab=98.43  E-value=1.9e-08  Score=86.14  Aligned_cols=129  Identities=19%  Similarity=0.240  Sum_probs=100.1

Q ss_pred             hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----------HHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLENQQI   94 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~~~qi   94 (188)
                      ...+++..|..+-..+. |.|++++++.        ..+....+++.++..++++....          .....++ .|+
T Consensus        62 ~~~~~i~~e~~~~~~~s~h~n~~~~~~~--------~~~~~~~~~~~~~s~g~~~f~~i~~~~~~~~~~~~~~~~~-~ql  132 (601)
T KOG0590|consen   62 DSSEHIDTETDIQKKLSKHSNTVHMIEP--------SSSPRSYLLSLSYSDGGSLFSKISHPDSTGTSSSSASRYL-PQL  132 (601)
T ss_pred             chhhhcCccccccccccccccccccCCc--------cCCCcccccccCcccccccccccccCCccCCCCcchhhhh-hhh
Confidence            34455667888888887 9999999985        35567788999998888876532          2345566 799


Q ss_pred             HHHHHHHh-hcC-------CCC--------eEEEecCCccc--------------ccc-cccccCCCCccccccCCCCch
Q psy7174          95 LEGLQALK-SSM-------PAL--------LKKFVGIGIGR--------------HVC-TLYCTRGAPELLFGARMYGVG  143 (188)
Q Consensus        95 ~~gl~~lH-~~~-------~~~--------ilkl~dfg~~~--------------~~~-~~~y~~~aPe~~~~~~~~~~~  143 (188)
                      ..|+.|+| ..+       |+|        .+|++|||+++              .+| +..|  .|||...+.....+.
T Consensus       133 ~s~l~~~H~~~~~~h~~ikP~n~~l~~s~~~l~~~df~~At~~~~~~g~~~~~~~~~g~s~~y--~a~E~~~~~~~~~~~  210 (601)
T KOG0590|consen  133 NSGLSYLHPENGVTHRDIKPSNSLLDESGSALKIADFGLATAYRNKNGAERSLKDRCGSSPPY--GAPEHLSGKAYRGPS  210 (601)
T ss_pred             ccCccccCcccccccCCCCCccchhccCCCcccCCCchhhccccccCCcceeeecccCCCCCC--CCcccccchhhcCCC
Confidence            99999999 544       333        36899999754              457 8889  999999875446788


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCC
Q psy7174         144 IDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       144 ~DiwslG~il~el~~g~~pf~~  165 (188)
                      .|+||.|+++..+++|..|+..
T Consensus       211 ~d~~S~g~~l~~~~~g~~p~~~  232 (601)
T KOG0590|consen  211 VDVWSLGIVLSAMLTGELPWDF  232 (601)
T ss_pred             cccccccccccccccCCCCccc
Confidence            9999999999999999988753

>KOG1166|consensus

Probab=98.38  E-value=5.8e-07  Score=79.80  Aligned_cols=95  Identities=14%  Similarity=0.144  Sum_probs=76.7

Q ss_pred             CCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------------EEE
Q psy7174          62 LSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL--------------KKF  112 (188)
Q Consensus        62 ~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------------lkl  112 (188)
                      ...+.-++++||.+.|+|.++.        .-+.++. .|++.-++.||..+       |+|.              ++|
T Consensus       764 ~~~~~S~lv~ey~~~Gtlld~~N~~~~m~e~lv~~~~-~qml~ive~lH~~~IIHgDiKPDNfll~~~~~~~~~~~~l~l  842 (974)
T KOG1166|consen  764 VFQNASVLVSEYSPYGTLLDLINTNKVMDEYLVMFFS-CQMLRIVEHLHAMGIIHGDIKPDNFLLRREICADSDSKGLYL  842 (974)
T ss_pred             ccCCcceeeeeccccccHHHhhccCCCCCchhhhHHH-HHHHHHHHHHHhcceecccCCcceeEeecccCCCCcccceEE
Confidence            3356779999999999998863        2345555 69999999999988       5554              599


Q ss_pred             ecCCcc-------------cccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCC
Q psy7174         113 VGIGIG-------------RHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKA  160 (188)
Q Consensus       113 ~dfg~~-------------~~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~  160 (188)
                      +|||.+             ..++|..+  -++|+..+.+ +++..|.+.+.-+++.|+.|+
T Consensus       843 IDfG~siDm~lfp~~~~F~~~~~td~f--~C~EM~~grp-WtYq~DyfGlAa~~h~mLFG~  900 (974)
T KOG1166|consen  843 IDFGRSIDMKLFPDGTKFKAVWHTDLF--DCIEMREGRP-WTYQIDYFGLAATVHVMLFGK  900 (974)
T ss_pred             EecccceeeeEcCCCcEEeeeeccccc--hhHHHhcCCC-CchhhhhHHHHHHHHHHHHHH
Confidence            999953             24567777  8999998865 999999999999999999874

>KOG0606|consensus

Probab=98.31  E-value=3.6e-07  Score=80.74  Aligned_cols=141  Identities=19%  Similarity=0.199  Sum_probs=103.1

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      ..+.+.++-.++-..+||.+++..-        ++.-....+++++|..++++....        +..+.+. ..++.++
T Consensus       847 ~~~s~r~~s~~~i~p~~P~v~~~~~--------s~~~rsP~~L~~~~~~~~~~~Skl~~~~~~saepaRs~i-~~~vqs~  917 (1205)
T KOG0606|consen  847 DYESIRSKSNILITPRSPAVVRSFP--------SFPCRSPLPLVGHYLNGGDLPSKLHNSGCLSAEPARSPI-LERVQSL  917 (1205)
T ss_pred             cccccCCccCccccCCCCceecccC--------CCCCCCCcchhhHHhccCCchhhhhcCCCcccccccchh-HHHHhhh
Confidence            4555666666666666777776643        234466789999999988877641        2233444 5788999


Q ss_pred             HHHhhcC-------CCCeE-------EEecCCcc------------------------------------------cccc
Q psy7174          99 QALKSSM-------PALLK-------KFVGIGIG------------------------------------------RHVC  122 (188)
Q Consensus        99 ~~lH~~~-------~~~il-------kl~dfg~~------------------------------------------~~~~  122 (188)
                      ++||...       |.+++       +++|||..                                          ...+
T Consensus       918 e~L~s~~r~h~~~~p~~~l~~~~gh~~l~~~~t~~~vg~~~p~~~~sg~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  997 (1205)
T KOG0606|consen  918 ESLHSSLRKHRDLKPDSLLIAYDGHRPLTDFGTLSKVGLIPPTTDLSGPSSSGTPRRLSRSERRPQLSADEARRKHAVVG  997 (1205)
T ss_pred             hccccchhhcccccccchhhcccCCcccCccccccccccccCcCCcccccccCccccccccccccccccchhhccccccC
Confidence            9999973       33332       56666520                                          0356


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |+.|  .+||.+.+.. ..+.+|+|+.|+.++|.++|.+||....+.+.++.|....
T Consensus       998 t~~~--laPe~~lg~~-hgs~ad~~~~g~~l~e~l~g~pp~na~tpq~~f~ni~~~~ 1051 (1205)
T KOG0606|consen  998 TPDY--LAPEILLGRR-HGSAADWWSSGVCLFEVLTGIPPFNAETPQQIFENILNRD 1051 (1205)
T ss_pred             CCcc--cCCccccccc-CCCcchhhhhhhhhhhhhcCCCCCCCcchhhhhhccccCC
Confidence            7889  9999998866 8899999999999999999999999999988888886553

>PF14531 Kinase-like: Kinase-like; PDB: 3DZO_A 2W1Z_A 3BYV_A 3Q5Z_A 3Q60_A

Probab=98.29  E-value=1.8e-06  Score=67.38  Aligned_cols=72  Identities=18%  Similarity=0.085  Sum_probs=50.0

Q ss_pred             HHHHHHHHHHhhcC-------CC-------CeEEEecCCcccc--------cccccccCCCCcccccc-------CCCCc
Q psy7174          92 QQILEGLQALKSSM-------PA-------LLKKFVGIGIGRH--------VCTLYCTRGAPELLFGA-------RMYGV  142 (188)
Q Consensus        92 ~qi~~gl~~lH~~~-------~~-------~ilkl~dfg~~~~--------~~~~~y~~~aPe~~~~~-------~~~~~  142 (188)
                      .|++..+++||+.|       ++       ..+.++||+.-..        ..+..|  .+||.....       ..++.
T Consensus       152 ~Q~I~lvA~Lh~~GlVHgdi~~~nfll~~~G~v~Lg~F~~~~r~g~~~~~~~~~~~~--~PPe~~~~~~~~~~~~~~~t~  229 (288)
T PF14531_consen  152 VQMIRLVANLHSYGLVHGDIKPENFLLDQDGGVFLGDFSSLVRAGTRYRCSEFPVAF--TPPELESCAGQFGQNNAPYTF  229 (288)
T ss_dssp             HHHHHHHHHHHHTTEEEST-SGGGEEE-TTS-EEE--GGGEEETTEEEEGGGS-TTT--S-HHHHHHHTSCHHSEEEE-H
T ss_pred             HHHHHHHHHHhhcceEecccceeeEEEcCCCCEEEcChHHHeecCceeeccCCCccc--CChhhhhhhcccCcccceeee
Confidence            68999999999998       33       4479999985332        223456  788876432       13788


Q ss_pred             hhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         143 GIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       143 ~~DiwslG~il~el~~g~~pf~~  165 (188)
                      +.|.|+||+++|.++++..||..
T Consensus       230 ~~DaW~LG~~ly~lWC~~lPf~~  252 (288)
T PF14531_consen  230 ATDAWQLGITLYSLWCGRLPFGL  252 (288)
T ss_dssp             HHHHHHHHHHHHHHHHSS-STCC
T ss_pred             ccCHHHHHHHHHHHHHccCCCCC
Confidence            99999999999999999999964

>smart00090 RIO RIO-like kinase

Probab=98.26  E-value=2.2e-06  Score=65.50  Aligned_cols=80  Identities=14%  Similarity=0.055  Sum_probs=57.1

Q ss_pred             HHHHHHHHHHhCCCCC--eeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLDYAN--IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        30 ~~~~E~~il~~l~h~n--iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~   99 (188)
                      .+.+|+++++++.+..  +.+.++.            ...+++|||+.++++...        ......++ .|+++++.
T Consensus        96 ~~~~E~~~L~~L~~~~i~~p~~~~~------------~~~~lV~E~~~g~~L~~~~~~~~~~~~~~~~~i~-~qi~~~l~  162 (237)
T smart00090       96 WAEKEFRNLQRLYEAGVPVPKPIAW------------RRNVLVMEFIGGDGLPAPRLKDVEPEEEEEFELY-DDILEEMR  162 (237)
T ss_pred             HHHHHHHHHHHHHhcCCCCCeeeEe------------cCceEEEEEecCCcccccccccCCcchHHHHHHH-HHHHHHHH
Confidence            3568999999997532  3333332            235899999999876542        22345566 79999999


Q ss_pred             HHhhcC--------CCCe------EEEecCCcccccc
Q psy7174         100 ALKSSM--------PALL------KKFVGIGIGRHVC  122 (188)
Q Consensus       100 ~lH~~~--------~~~i------lkl~dfg~~~~~~  122 (188)
                      +||+.+        |+|+      ++++|||.+...+
T Consensus       163 ~LH~~g~iiH~Dikp~NIli~~~~i~LiDFg~a~~~~  199 (237)
T smart00090      163 KLYKEGELVHGDLSEYNILVHDGKVVIIDVSQSVELD  199 (237)
T ss_pred             HHHhcCCEEeCCCChhhEEEECCCEEEEEChhhhccC
Confidence            999987        7777      5899999875444

>cd05144 RIO2_C RIO kinase family; RIO2, C-terminal catalytic domain

Probab=98.22  E-value=4.5e-06  Score=61.75  Aligned_cols=78  Identities=10%  Similarity=-0.035  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHhCCCCC--eeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--HHHHHHHHHHHHHHHHHHhhcC
Q psy7174          30 QAKAEGKQDRRLDYAN--IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--SHLRYLENQQILEGLQALKSSM  105 (188)
Q Consensus        30 ~~~~E~~il~~l~h~n--iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--~~~~~~~~~qi~~gl~~lH~~~  105 (188)
                      ...+|+.++..+.|++  +...++            ....+++||++.++++....  .....++ .++++++.++|+.+
T Consensus        79 ~~~~E~~~l~~l~~~~i~v~~~~~------------~~~~~lv~e~~~g~~L~~~~~~~~~~~~~-~~i~~~l~~lh~~g  145 (198)
T cd05144          79 AAQKEFAALKALYEEGFPVPKPID------------WNRHAVVMEYIDGVELYRVRVLEDPEEVL-DEILEEIVKAYKHG  145 (198)
T ss_pred             HHHHHHHHHHHHHHcCCCCCceee------------cCCceEEEEEeCCcchhhccccccHHHHH-HHHHHHHHHHHHCC
Confidence            3678999999998874  333333            23459999999999987763  3344555 79999999999988


Q ss_pred             -------CCCe-------EEEecCCcccc
Q psy7174         106 -------PALL-------KKFVGIGIGRH  120 (188)
Q Consensus       106 -------~~~i-------lkl~dfg~~~~  120 (188)
                             |.|+       ++++|||.+..
T Consensus       146 i~H~Dl~p~Nill~~~~~~~liDfg~~~~  174 (198)
T cd05144         146 IIHGDLSEFNILVDDDEKIYIIDWPQMVS  174 (198)
T ss_pred             CCcCCCCcccEEEcCCCcEEEEECCcccc
Confidence                   6666       58999998743

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO2 is present in archaea and eukaryotes. It contains an N-terminal winged helix (wHTH) domain and a C-terminal RIO kinase catalytic domain. The wHTH domain is primarily seen in DNA-binding proteins, although some wHTH dom

>PRK01723 3-deoxy-D-manno-octulosonic-acid kinase; Reviewed

Probab=98.13  E-value=1.3e-05  Score=61.25  Aligned_cols=88  Identities=13%  Similarity=-0.029  Sum_probs=60.3

Q ss_pred             hhHHHHHHHHHHhCCCCCe--eEEeeecccccCCCCCCCCccEEEEecccc-ccHHHHHHH---HHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANI--IQYLSLPVETLQPTTLSTSSDYIVVKIFTK-TTKARFYSH---LRYLENQQILEGLQAL  101 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~ni--v~~~~~~~~~~~~~~~~~~~~~iv~e~~~~-~~l~~~~~~---~~~~~~~qi~~gl~~l  101 (188)
                      ...+.+|++++.+++|++|  .+.+++....    .......++++|++++ .++..+...   -.... .|++.++.+|
T Consensus        84 ~~r~~rE~~ll~~L~~~gi~vP~pl~~~~~~----~~~~~~~~lV~e~l~G~~~L~~~l~~~~l~~~~~-~~i~~~l~~l  158 (239)
T PRK01723         84 RTRAFAEFRLLAQLYEAGLPVPRPIAARVVR----HGLFYRADILIERIEGARDLVALLQEAPLSEEQW-QAIGQLIARF  158 (239)
T ss_pred             hhHHHHHHHHHHHHHhCCCCCceeEeeeeee----cCcceeeeEEEEecCCCCCHHHHHhcCCCCHHHH-HHHHHHHHHH
Confidence            3567899999999998775  5666642111    0111234699999997 677765321   11234 6899999999


Q ss_pred             hhcC-------CCCe-------EEEecCCcccc
Q psy7174         102 KSSM-------PALL-------KKFVGIGIGRH  120 (188)
Q Consensus       102 H~~~-------~~~i-------lkl~dfg~~~~  120 (188)
                      |+.|       |.|+       ++++|||.+..
T Consensus       159 H~~GI~HrDlkp~NILv~~~~~v~LIDfg~~~~  191 (239)
T PRK01723        159 HDAGVYHADLNAHNILLDPDGKFWLIDFDRGEL  191 (239)
T ss_pred             HHCCCCCCCCCchhEEEcCCCCEEEEECCCccc
Confidence            9998       6777       58999998643

>KOG1266|consensus

Probab=98.10  E-value=1.4e-05  Score=63.09  Aligned_cols=119  Identities=14%  Similarity=0.085  Sum_probs=78.7

Q ss_pred             HHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHHHHHHHHHHhh
Q psy7174          36 KQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQILEGLQALKS  103 (188)
Q Consensus        36 ~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~qi~~gl~~lH~  103 (188)
                      ..|-++.|.||++++.++....   ..+.....++.||+..|++..++            ..++.++ .||+.||.|||+
T Consensus       119 dnllqlvHsnlvkfH~yw~d~K---~~e~~rviFiteymssgs~~~fLkrt~~~~~a~~~~~wkkw~-tqIlsal~yLhs  194 (458)
T KOG1266|consen  119 DNLLQLVHSNLVKFHKYWTDKK---YEEKPRVIFITEYMSSGSLKQFLKRTKKNQKALFQKAWKKWC-TQILSALSYLHS  194 (458)
T ss_pred             HHHHHHHHHHHHHHHHhhcccc---cccccceEEEEecccchhHHHHHHHHHHhhhhhhHHHHHHHH-HHHHhhhhhhhc
Confidence            4456667999999999864321   22345567889999999988863            3455566 699999999999


Q ss_pred             cC----------------CCCeEEEecCCc---------------ccccccccccCCCCccccccCCCCchhHHHHHHHH
Q psy7174         104 SM----------------PALLKKFVGIGI---------------GRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCI  152 (188)
Q Consensus       104 ~~----------------~~~ilkl~dfg~---------------~~~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i  152 (188)
                      ..                ++.++|+.--..               +...+.+.|  -+||.=.-.. .+..+|||++|.-
T Consensus       195 ~~PpiihgnlTc~tifiq~ngLIkig~~ap~s~h~s~~~~~~~Ek~~~~~~~g~--~a~~sg~~tn-~~~a~dIy~fgmc  271 (458)
T KOG1266|consen  195 CDPPIIHGNLTCDTIFIQHNGLIKIGSVAPDSTHPSVNSTREAEKSVNTSLPGF--SAPESGTTTN-TTGASDIYKFGMC  271 (458)
T ss_pred             cCCccccCCcchhheeecCCceEEecccCccccchhhhhhhHhhhhccccCCcc--ccCCcCcccc-cccchhhhhhhHH
Confidence            87                333334321111               112234556  6777543322 4678999999988


Q ss_pred             HHHHHhCCC
Q psy7174         153 ICELLLKAP  161 (188)
Q Consensus       153 l~el~~g~~  161 (188)
                      ..+|..+..
T Consensus       272 AlemailEi  280 (458)
T KOG1266|consen  272 ALEMAILEI  280 (458)
T ss_pred             HHHHHHhee
Confidence            888877654

>cd05120 APH_ChoK_like Aminoglycoside 3'-phosphotransferase (APH) and Choline Kinase (ChoK) family

Probab=98.01  E-value=3.5e-05  Score=53.37  Aligned_cols=82  Identities=13%  Similarity=0.075  Sum_probs=59.7

Q ss_pred             hhHHHHHHHHHHhCCC--CCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-HHHHHHHHHHHHHHHHHHHhhc
Q psy7174          28 ETQAKAEGKQDRRLDY--ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-YSHLRYLENQQILEGLQALKSS  104 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h--~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-~~~~~~~~~~qi~~gl~~lH~~  104 (188)
                      ...+.+|+.+++.++|  .++.+++++.        ..+...++++|++.++.+..+ ........ .++++++..+|..
T Consensus        35 ~~~~~~e~~~~~~l~~~~~~~p~~~~~~--------~~~~~~~~v~e~~~g~~~~~~~~~~~~~~~-~~~~~~l~~lh~~  105 (155)
T cd05120          35 GADREREVAILQLLARKGLPVPKVLASG--------ESDGWSYLLMEWIEGETLDEVSEEEKEDIA-EQLAELLAKLHQL  105 (155)
T ss_pred             hhHHHHHHHHHHHHHHcCCCCCeEEEEc--------CCCCccEEEEEecCCeecccCCHHHHHHHH-HHHHHHHHHHhCC
Confidence            4678899999999986  5888888753        233678999999998877542 12223345 6899999999984


Q ss_pred             C----------CCCe-------EEEecCCcc
Q psy7174         105 M----------PALL-------KKFVGIGIG  118 (188)
Q Consensus       105 ~----------~~~i-------lkl~dfg~~  118 (188)
                      .          ++|+       +++.|||.+
T Consensus       106 ~~~~i~H~Dl~~~Nil~~~~~~~~l~Df~~~  136 (155)
T cd05120         106 PLLVLCHGDLHPGNILVDDGKILGIIDWEYA  136 (155)
T ss_pred             CceEEEecCCCcceEEEECCcEEEEEecccc
Confidence            2          5554       578888875

The APH/ChoK family is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). The family is composed of APH, ChoK, ethanolamine kinase (ETNK), macrolide 2'-phosphotransferase (MPH2'), an unusual homoserine kinase, and uncharacterized proteins with similarity to the N-terminal domain of acyl-CoA dehydrogenase 10 (ACAD10). The members of this family catalyze the transfer of the gamma-phosphoryl group from ATP (or CTP) to small molecule substrates such as aminoglycosides, macrolides, choline, ethanolamine, and homoserine. Phosphorylation of the antibiotics, aminoglycosides and macrolides, leads to their inactivation and to bacterial antibiotic resistance. Phosphorylation of choline, ethanolamine, and homoserine serves

>KOG0601|consensus

Probab=97.74  E-value=3.1e-05  Score=64.83  Aligned_cols=144  Identities=18%  Similarity=0.155  Sum_probs=96.0

Q ss_pred             ccccccc---cCCccc-ccccccc-----chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           4 VCFKPFQ---QSKWSP-NTPMARC-----DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         4 ~~g~v~~---~~~~~~-~~~i~~~-----~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      .+|.+|.   .+++.+ ..++++.     ......+=.+|+.-.++++ |+|.++.+..+        .++...++-+|.
T Consensus       128 ~~~s~~~~~~~~~~s~~~~a~k~s~~p~s~p~~~~~k~~~~~s~~~i~~~~~~v~~~~~~--------e~~~~lfiqtE~  199 (524)
T KOG0601|consen  128 SKGSVFKSRCTNSESPHKFAVKKSKIPFSPPLDSKRKLREFLSHHKIDSHENPVRDSPAW--------EGSGILFIQTEL  199 (524)
T ss_pred             CCceeecccCCcccCCcccccccccCCCCCccccccccchhhcccccCccccccccCccc--------ccCCcceeeecc
Confidence            5778887   336665 4444441     2234445567888888887 99999977653        445666777777


Q ss_pred             cccccHHHH---------HHHHHHHHHHHHHH----HHHHHhhcC-------CCCe--------EEEecCCccc------
Q psy7174          74 FTKTTKARF---------YSHLRYLENQQILE----GLQALKSSM-------PALL--------KKFVGIGIGR------  119 (188)
Q Consensus        74 ~~~~~l~~~---------~~~~~~~~~~qi~~----gl~~lH~~~-------~~~i--------lkl~dfg~~~------  119 (188)
                      |. .+++.+         +..+.-.. .+...    ||.++|+.+       |.++        .++.|||+-.      
T Consensus       200 ~~-~sl~~~~~~~~~~~p~~~l~~~~-~~~~~~~~~al~~~hs~~~~~~~~kp~~i~~~~~~~s~~~~df~~v~~i~~~~  277 (524)
T KOG0601|consen  200 CG-ESLQSYCHTPCNFLPDNLLWNSL-RDWLSRDVTALSHLHSNNIVHDDLKPANIFTTSDWTSCKLTDFGLVSKISDGN  277 (524)
T ss_pred             cc-chhHHhhhcccccCCchhhhhHH-hhhhhcccccccccCCCcccccccchhheecccccceeecCCcceeEEccCCc
Confidence            75 555553         12233333 45555    999999987       3333        4778888522      


Q ss_pred             ----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCC
Q psy7174         120 ----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAP  161 (188)
Q Consensus       120 ----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~  161 (188)
                                .-+...|  ++||+..+.  ++...|++++|.+..+..++.-
T Consensus       278 ~~~~~~~~~r~~~~~~Y--~~ke~~~~l--~~~~~di~sl~ev~l~~~l~~~  325 (524)
T KOG0601|consen  278 FSSVFKVSKRPEGDCIY--AAKELLNGL--ATFASDIFSLGEVILEAILGSH  325 (524)
T ss_pred             cccceeeeecCCCCceE--eChhhhccc--cchHhhhcchhhhhHhhHhhcc
Confidence                      1345578  899998764  7899999999999988877643

>KOG3741|consensus

Probab=97.60  E-value=0.00049  Score=57.54  Aligned_cols=119  Identities=16%  Similarity=0.068  Sum_probs=75.2

Q ss_pred             HHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc-ccHHHH-----------------------HHHHH
Q psy7174          32 KAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK-TTKARF-----------------------YSHLR   87 (188)
Q Consensus        32 ~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~-~~l~~~-----------------------~~~~~   87 (188)
                      ..-++..+++.|+|+|+|.++|..    ....+..+++|++|.+. ++|.++                       +..+.
T Consensus       321 t~lve~wkkl~h~NvV~frevf~t----~tF~D~SlvlvYDYyP~s~TL~d~~F~~~~~t~~~n~~~~~~~~~~~e~~lW  396 (655)
T KOG3741|consen  321 TSLVEAWKKLCHTNVVPFREVFLT----YTFGDLSLVLVYDYYPSSPTLYDLYFANPPFTKRTNSFYPSQNLKAPEEVLW  396 (655)
T ss_pred             hHHHHHHHHhccCceeehhhhhhh----hccCcceEEEEEecCCCCchHHHHHccCCccccccccccccCCCCchHHHHH
Confidence            345678899999999999998753    34677888999999974 445442                       24455


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCeEEEecCCcccccccccccC--CCC-ccccccCCCCchhHHHHHHHHHHHHH
Q psy7174          88 YLENQQILEGLQALKSSM-------PALLKKFVGIGIGRHVCTLYCTR--GAP-ELLFGARMYGVGIDMWAVGCIICELL  157 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~ilkl~dfg~~~~~~~~~y~~--~aP-e~~~~~~~~~~~~DiwslG~il~el~  157 (188)
                      .++ -|+..||.++|+.|       +.+|+...+.-+ +..|+..+.-  -.| +.+.    --.+-|.=-||.++..++
T Consensus       397 ~y~-~QLtaaL~sIHssGLAck~L~~~kIlv~G~~RI-riS~C~i~Dvl~~d~~~~le----~~Qq~D~~~lG~ll~aLA  470 (655)
T KOG3741|consen  397 SYI-SQLTAALYSIHSSGLACKTLDLKKILVTGKMRI-RISGCGIMDVLQEDPTEPLE----SQQQNDLRDLGLLLLALA  470 (655)
T ss_pred             HHH-HHHHHHHHHHHhcCceeecccHhHeEeeCcceE-EEecccceeeecCCCCcchh----HHhhhhHHHHHHHHHHHh
Confidence            555 69999999999999       444432221100 0111111100  122 2221    123558888999999999


Q ss_pred             hCC
Q psy7174         158 LKA  160 (188)
Q Consensus       158 ~g~  160 (188)
                      +|.
T Consensus       471 t~~  473 (655)
T KOG3741|consen  471 TGT  473 (655)
T ss_pred             hcc
Confidence            984

>cd05119 RIO RIO kinase family, catalytic domain

Probab=97.57  E-value=0.0003  Score=51.22  Aligned_cols=54  Identities=13%  Similarity=0.067  Sum_probs=40.5

Q ss_pred             ccEEEEeccccc-----cHHHHH--HHHHHHHHHHHHHHHHHHhh-cC-------CCCe------EEEecCCcccc
Q psy7174          66 SDYIVVKIFTKT-----TKARFY--SHLRYLENQQILEGLQALKS-SM-------PALL------KKFVGIGIGRH  120 (188)
Q Consensus        66 ~~~iv~e~~~~~-----~l~~~~--~~~~~~~~~qi~~gl~~lH~-~~-------~~~i------lkl~dfg~~~~  120 (188)
                      ..++++||++++     .+....  .....++ .+++.++.++|+ .+       |+|+      ++++|||.+..
T Consensus        89 ~~~lv~e~~~g~~~~~~~l~~~~~~~~~~~~~-~~~~~~l~~lh~~~~ivH~Dl~p~Nili~~~~~~liDfg~a~~  163 (187)
T cd05119          89 RHVLVMEFIGGDGIPAPRLKDVRLLEDPEELY-DQILELMRKLYREAGLVHGDLSEYNILVDDGKVYIIDVPQAVE  163 (187)
T ss_pred             CCEEEEEEeCCCCccChhhhhhhhcccHHHHH-HHHHHHHHHHhhccCcCcCCCChhhEEEECCcEEEEECccccc
Confidence            469999999984     444332  3455666 799999999999 66       6666      58999998753

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases present in archaea, bacteria and eukaryotes. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. RIO kinases contain a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. Most organisms contain at least two RIO kinases, RIO1 and RIO2. A third protein, RIO3, is present in multicellular eukaryotes. In yeast, RIO1 and RIO2 are essential for survival. They funct

>cd05151 ChoK Choline Kinase (ChoK)

Probab=97.39  E-value=0.0004  Score=49.59  Aligned_cols=79  Identities=11%  Similarity=0.042  Sum_probs=53.6

Q ss_pred             hHHHHHHHHHHhCCCCCee-EEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q psy7174          29 TQAKAEGKQDRRLDYANII-QYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSM--  105 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv-~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~~~--  105 (188)
                      ....+|+++++.+.+.+++ +++..          .....+++||++.+.++........... .+++++|..||+.+  
T Consensus        37 ~~~~~E~~~l~~l~~~~~~P~~~~~----------~~~~~~lv~e~i~G~~l~~~~~~~~~~~-~~l~~~l~~LH~~~~~  105 (170)
T cd05151          37 INRENEAENSKLAAEAGIGPKLYYF----------DPETGVLITEFIEGSELLTEDFSDPENL-EKIAKLLKKLHSSPLP  105 (170)
T ss_pred             cCHHHHHHHHHHHHHhCCCCceEEE----------eCCCCeEEEEecCCCccccccccCHHHH-HHHHHHHHHHhCCCCC
Confidence            3567899999998755543 44443          1223589999999988864322223345 68999999999864  


Q ss_pred             ----------CCCe------EEEecCCcc
Q psy7174         106 ----------PALL------KKFVGIGIG  118 (188)
Q Consensus       106 ----------~~~i------lkl~dfg~~  118 (188)
                                ++|+      ++++||+.+
T Consensus       106 ~~~~~HgD~~~~Nil~~~~~~~liDf~~a  134 (170)
T cd05151         106 DLVPCHNDLLPGNFLLDDGRLWLIDWEYA  134 (170)
T ss_pred             CceeecCCCCcCcEEEECCeEEEEecccc
Confidence                      5555      467888765

The ChoK subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). It is composed of bacterial and eukaryotic choline kinases, as well as eukaryotic ethanolamine kinase. ChoK catalyzes the transfer of the gamma-phosphoryl group from ATP (or CTP) to its substrate, choline, producing phosphorylcholine (PCho), a precursor to the biosynthesis of two major membrane phospholipids, phosphatidylcholine (PC), and sphingomyelin (SM). Although choline is the preferred substrate, ChoK also shows substantial activity towards ethanolamine and its N-methylated derivatives. Bacterial ChoK is also referred to as licA protein. ETNK catalyzes the transfer of the gamma-phosphoryl group from CTP to ethanolamine (Etn), the first step in the CDP-Etn pathway for the formation of the major ph

>KOG0601|consensus

Probab=97.29  E-value=0.00034  Score=58.73  Aligned_cols=148  Identities=16%  Similarity=0.097  Sum_probs=98.2

Q ss_pred             HHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        30 ~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      ....|+-+...+. |.+++++...+        ...+..++=.|||.+++....        +.....+. .|++.++.+
T Consensus       311 ~sl~ev~l~~~l~~~~~~~g~~~~W--------~~~r~~~ip~e~~~~~s~~l~~~~~~~~d~~~~~~~~-~q~~~~l~~  381 (524)
T KOG0601|consen  311 FSLGEVILEAILGSHLPSVGKNSSW--------SQLRQGYIPLEFCEGGSSSLRSVTSQMLDEDPRLRLT-AQILTALNV  381 (524)
T ss_pred             cchhhhhHhhHhhcccccCCCCCCc--------cccccccCchhhhcCcchhhhhHHHHhcCcchhhhhH-HHHHhcccc
Confidence            3456777777775 88889987754        234556688999988887663        23344455 699999999


Q ss_pred             HhhcC-------CCCeE--------EEecCCccc--------ccccccccCC-CCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         101 LKSSM-------PALLK--------KFVGIGIGR--------HVCTLYCTRG-APELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       101 lH~~~-------~~~il--------kl~dfg~~~--------~~~~~~y~~~-aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                      +|+..       |+||.        ++.|||..+        ..+..++  . ..|.+.....+..++|++|||..+.+.
T Consensus       382 i~s~~~~~~d~~psni~i~~~~~~~~~~~~~~~t~~~~~~~~~~~~~r~--~p~~~~~~e~~~~~~~~~~~sl~~~~~e~  459 (524)
T KOG0601|consen  382 IHSKLFVHLDVKPSNILISNDGFFSKLGDFGCWTRLAFSSGVFHHIDRL--YPIAEILLEDYPHLSKADIFSLGLSVDEA  459 (524)
T ss_pred             ccchhhhcccccccceeeccchhhhhccccccccccceecccccccccc--cccchhhcccccccccccccccccccccc
Confidence            99877       56663        566676542        2233444  4 255555444488999999999999999


Q ss_pred             HhCCCCCCC---------------CChHHHHHHHHhhcCCCCCCCCC
Q psy7174         157 LLKAPFLPG---------------ESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       157 ~~g~~pf~~---------------~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +++.+.-..               .....+++.+.+.-..|++..||
T Consensus       460 ~~~~~ls~~~~~~~~i~~~~~p~~~~~~~~~q~~~kv~~~~~~~~~~  506 (524)
T KOG0601|consen  460 ITGSPLSESGVQSLTIRSGDTPNLPGLKLQLQVLLKVMINPDRKRRP  506 (524)
T ss_pred             ccCcccCcccccceeeecccccCCCchHHhhhhhhhhhcCCccccch
Confidence            887653321               11235555666666667777665

>KOG0576|consensus

Probab=97.29  E-value=0.00012  Score=62.50  Aligned_cols=123  Identities=15%  Similarity=0.096  Sum_probs=88.3

Q ss_pred             hHHHHHHHHHHhCCCCC-eeEEeeecccccCCCCCCCCccEEEEeccccc-cHHHH---------HHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYAN-IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT-TKARF---------YSHLRYLENQQILEG   97 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~n-iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~-~l~~~---------~~~~~~~~~~qi~~g   97 (188)
                      ....-++++|.+++||| .++.++        ....+...++.++++.++ +....         .-+..... +.-.++
T Consensus       278 l~~rl~~eLLdK~n~P~~~v~~~~--------d~~~E~~~~i~~~i~s~~rs~~~~~~~se~~~~~~~~~~~~-r~et~~  348 (829)
T KOG0576|consen  278 LSRRLAIELLDKVNNPNPVVRYLE--------DYDGEDYLWIPMRICSTGRSSALEMTVSEIALEQYQFAYPL-RKETRP  348 (829)
T ss_pred             hhhHHHHHHHHHccCCCCcccccc--------cCCcccccchhhhhhcCCccccccCChhhHhhhhhhhhhhh-hhhccc
Confidence            44567999999999999 566555        335567889999999887 22211         12233444 567789


Q ss_pred             HHHHhhcC---CCCe------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh
Q psy7174          98 LQALKSSM---PALL------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL  158 (188)
Q Consensus        98 l~~lH~~~---~~~i------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~  158 (188)
                      ++++|+.-   ++++      .|..||+...          ..+++..  +|||+..... +....|.|+++.--.++..
T Consensus       349 l~~l~~~~~~~~d~~l~s~~~~~~~~~~v~~~L~~~~~~~t~~~~~~~--~~pev~~~~~-~~~~p~~~~~~~~~~~~ap  425 (829)
T KOG0576|consen  349 LAELHSSYKVHRDNILGSEEEVKLLDFAVPPQLTRTMKPRTAIGTPEP--LAPEVIQENT-IDGCPDSGSLAVSAIQMAP  425 (829)
T ss_pred             ccccccccccCcccccccccccccccccCCcccCcccccccCCCCCCC--CCchhhcccc-cccCCCccCCCcchhhcCC
Confidence            99999973   3333      5888888522          4566777  8999988766 8999999999988788877


Q ss_pred             CCCCC
Q psy7174         159 KAPFL  163 (188)
Q Consensus       159 g~~pf  163 (188)
                      |.+|-
T Consensus       426 ~~pPr  430 (829)
T KOG0576|consen  426 GLPPR  430 (829)
T ss_pred             CCCCC
Confidence            76665

>COG3642 Mn2+-dependent serine/threonine protein kinase [Signal transduction mechanisms]

Probab=97.27  E-value=0.0028  Score=46.43  Aligned_cols=84  Identities=10%  Similarity=0.099  Sum_probs=61.1

Q ss_pred             hHHHHHHHHHHhCCC--CCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHH-HHHHHHHHHHHHHHHhhcC
Q psy7174          29 TQAKAEGKQDRRLDY--ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHL-RYLENQQILEGLQALKSSM  105 (188)
Q Consensus        29 ~~~~~E~~il~~l~h--~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~-~~~~~~qi~~gl~~lH~~~  105 (188)
                      ++..+|++++++++-  -+.-.+++          .+.+...++|||..|..+.+..... ..++ +.+-.-+.-||.++
T Consensus        44 ~Rt~~Earil~~a~~~GV~~P~v~d----------vD~~~~~I~me~I~G~~lkd~l~~~~~~~~-r~vG~~vg~lH~~g  112 (204)
T COG3642          44 ERTRREARILAKAREAGVPVPIVYD----------VDPDNGLIVMEYIEGELLKDALEEARPDLL-REVGRLVGKLHKAG  112 (204)
T ss_pred             HHHHHHHHHHHHHHHcCCCCCeEEE----------EcCCCCEEEEEEeCChhHHHHHHhcchHHH-HHHHHHHHHHHhcC
Confidence            456789999998873  34444555          3456778999999999998764433 3345 67888888999998


Q ss_pred             -------CCCe------EEEecCCccccccc
Q psy7174         106 -------PALL------KKFVGIGIGRHVCT  123 (188)
Q Consensus       106 -------~~~i------lkl~dfg~~~~~~~  123 (188)
                             ++|+      +-++|||++....+
T Consensus       113 ivHGDLTtsNiIl~~~~i~~IDfGLg~~s~~  143 (204)
T COG3642         113 IVHGDLTTSNIILSGGRIYFIDFGLGEFSDE  143 (204)
T ss_pred             eecCCCccceEEEeCCcEEEEECCccccccc
Confidence                   5666      47899999865443

>cd05146 RIO3_euk RIO kinase family; eukaryotic RIO3, catalytic domain

Probab=96.67  E-value=0.008  Score=44.59  Aligned_cols=78  Identities=13%  Similarity=0.116  Sum_probs=52.9

Q ss_pred             HHHHHHHHHhCCC--CCeeEEeeecccccCCCCCCCCccEEEEeccccccH-----HHH---HHHHHHHHHHHHHHHHHH
Q psy7174          31 AKAEGKQDRRLDY--ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK-----ARF---YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        31 ~~~E~~il~~l~h--~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l-----~~~---~~~~~~~~~~qi~~gl~~  100 (188)
                      +.+|++.|+++..  -++-+.+++            ...+++|||+.++.+     .+.   ......+. .|++.+|..
T Consensus        73 a~kE~r~L~rl~~~Gv~vP~pi~~------------~~~~lvME~Ig~~~~~~~~Lkd~~~~~~~~~~i~-~~i~~~l~~  139 (197)
T cd05146          73 AEKEMHNLKRMQKAGIPCPEVVVL------------KKHVLVMSFIGDDQVPAPKLKDAKLNDEEMKNAY-YQVLSMMKQ  139 (197)
T ss_pred             HHHHHHHHHHHHHcCCCCCeEEEe------------cCCEEEEEEcCCCCccchhhhccccCHHHHHHHH-HHHHHHHHH
Confidence            4589999999873  455555553            367999999986532     211   12344455 799999998


Q ss_pred             H-hhcC-------CCCe------EEEecCCccccc
Q psy7174         101 L-KSSM-------PALL------KKFVGIGIGRHV  121 (188)
Q Consensus       101 l-H~~~-------~~~i------lkl~dfg~~~~~  121 (188)
                      | |+.+       +.|+      +.++|||.+-..
T Consensus       140 l~H~~glVHGDLs~~NIL~~~~~v~iIDF~qav~~  174 (197)
T cd05146         140 LYKECNLVHADLSEYNMLWHDGKVWFIDVSQSVEP  174 (197)
T ss_pred             HHHhCCeecCCCCHHHEEEECCcEEEEECCCceeC
Confidence            8 7876       4455      589999976443

The RIO kinase catalytic domain family is part of a larger superfamily, that includes the catalytic domains of other kinases such as the typical serine/threonine/tyrosine protein kinases (PKs), aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase (PI3K). RIO kinases are atypical protein serine kinases containing a kinase catalytic signature, but otherwise show very little sequence similarity to typical PKs. Serine kinases catalyze the transfer of the gamma-phosphoryl group from ATP to serine residues in protein substrates. The RIO catalytic domain is truncated compared to the catalytic domains of typical PKs, with deletions of the loops responsible for substrate binding. RIO3 is present only in multicellular eukaryotes. Its function is still unknown.

>KOG1093|consensus

Probab=96.40  E-value=0.012  Score=49.68  Aligned_cols=122  Identities=17%  Similarity=0.209  Sum_probs=72.3

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhhcCC
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMP  106 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~~~~  106 (188)
                      +..++..-++.++.+.|+|...++++       .........+|+|++...+ .+......... .++.     -|.-.+
T Consensus        25 ~s~~ilgr~~~lktl~~~~l~~yl~~-------~r~~~~r~IVV~e~~~~Sl-ed~~~~~~l~~-~s~~-----~~~~~~   90 (725)
T KOG1093|consen   25 NSIQILGRFQYLKSLQHDNLCQYLDF-------SRGKHERVIVVMEHYTMSL-EDILKTGNLKD-ESLL-----AHGVLH   90 (725)
T ss_pred             cHHHHhhhhHHHHhhcCccceeeEee-------ecCccceEEEEehhhccch-HHHHHhcccch-hhhc-----ccccce
Confidence            44567778889999999999999986       2222334678888885544 33322211111 1221     122224


Q ss_pred             CCeEEEecCCcccccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         107 ALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       107 ~~ilkl~dfg~~~~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      -++.+.+|-       -..+   .|-     + ..+++||||+|.++.++..|...+......+.+..|...
T Consensus        91 ~~~~~~td~-------~~t~---~~~-----~-~~pKsdVwsl~~i~~el~L~~~l~~~~~~s~~l~~i~k~  146 (725)
T KOG1093|consen   91 LNIIYITDH-------FLTK---YPS-----P-IGPKSDVWSLGFIILELYLGISLEAELTESEYLEILLKY  146 (725)
T ss_pred             ehhhhcccc-------cccc---CCC-----C-CCcchhhhhHHHHHHHHHHhhHHHHHHHHHHHHHHHHHh
Confidence            455566661       1111   111     1 336999999999999999888777665555555555443

>KOG3087|consensus

Probab=96.06  E-value=0.039  Score=40.68  Aligned_cols=84  Identities=14%  Similarity=0.139  Sum_probs=56.4

Q ss_pred             hhHHHHHHHHHHhCCCCC--eeEEeeecccccCCCCCCCCccEEEEecccc-ccHHHH----------HHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYAN--IIQYLSLPVETLQPTTLSTSSDYIVVKIFTK-TTKARF----------YSHLRYLENQQI   94 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~n--iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~-~~l~~~----------~~~~~~~~~~qi   94 (188)
                      .++..+|+++|.+++--.  ..+++.          .+.....+.||++.+ .++..+          .....-++ ++|
T Consensus        54 r~Rt~~Ear~l~k~~~~GI~~P~l~~----------~D~~~~~i~ME~~~g~~~vk~~i~~~~~~~~~d~~~~~~~-~~i  122 (229)
T KOG3087|consen   54 RKRTKQEARLLAKCRALGIPAPRLIF----------IDTYGGQIYMEFIDGASTVKDFILSTMEDESEDEGLAELA-RRI  122 (229)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCceEEE----------EecCCCeEEEEeccchhHHHHHHHHHccCcccchhHHHHH-HHH
Confidence            356778999999887322  223332          345677999999987 344443          12234566 788


Q ss_pred             HHHHHHHhhcC-------CCCeE----------EEecCCcccccc
Q psy7174          95 LEGLQALKSSM-------PALLK----------KFVGIGIGRHVC  122 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~il----------kl~dfg~~~~~~  122 (188)
                      -+.+.-||++.       .+|++          -++|||++....
T Consensus       123 G~~igklH~ndiiHGDLTTSNill~~~~~~~~~~lIdfgls~~s~  167 (229)
T KOG3087|consen  123 GELIGKLHDNDIIHGDLTTSNILLRSDGNQITPILIDFGLSSVSR  167 (229)
T ss_pred             HHHHHHhhhCCeecccccccceEEecCCCcCceEEEeecchhccc
Confidence            89999999987       45653          689999986543

>PF01163 RIO1: RIO1 family; InterPro: IPR018934 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=95.88  E-value=0.063  Score=39.54  Aligned_cols=81  Identities=19%  Similarity=0.158  Sum_probs=50.1

Q ss_pred             hHHHHHHHHHHhCCCC--CeeEEeeecccccCCCCCCCCccEEEEeccc--cccHHHHHH------HHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYA--NIIQYLSLPVETLQPTTLSTSSDYIVVKIFT--KTTKARFYS------HLRYLENQQILEGL   98 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~--niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~--~~~l~~~~~------~~~~~~~~qi~~gl   98 (188)
                      ..+.+|.+.|.++..-  ++-+.+++            ....++|||+.  +..+..+..      ....+. .+++..+
T Consensus        53 ~~~~~E~~~L~~l~~~Gv~vP~p~~~------------~~~~ivME~I~~~G~~~~~l~~~~~~~~~~~~~~-~~il~~~  119 (188)
T PF01163_consen   53 EWAKKEFRNLKRLYEAGVPVPKPYDY------------NRNVIVMEYIGEDGVPLPRLKDVDLSPEEPKELL-EEILEEI  119 (188)
T ss_dssp             HHHHHHHHHHHHCCCTT-SS--EEEE------------ETTEEEEE--EETTEEGGCHHHCGGGGSTHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHHHCCccCCcEEEE------------eCCEEEEEecCCCccchhhHHhccccchhHHHHH-HHHHHHH
Confidence            4578899999999855  45566654            35689999999  655555422      234555 6777755


Q ss_pred             HH-HhhcC-------CCCe------EEEecCCcccccc
Q psy7174          99 QA-LKSSM-------PALL------KKFVGIGIGRHVC  122 (188)
Q Consensus        99 ~~-lH~~~-------~~~i------lkl~dfg~~~~~~  122 (188)
                      .. +|+.|       +.|+      +.++|||.+....
T Consensus       120 ~~~~~~~givHGDLs~~NIlv~~~~~~iIDf~qav~~~  157 (188)
T PF01163_consen  120 IKMLHKAGIVHGDLSEYNILVDDGKVYIIDFGQAVDSS  157 (188)
T ss_dssp             HHHHHCTTEEESS-STTSEEEETTCEEE--GTTEEETT
T ss_pred             HHHHHhcCceecCCChhhEEeecceEEEEecCcceecC
Confidence            55 46777       5566      5899999765433

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents RIO kinase, they exhibit little sequence similarity with eukaryotic protein kinases, and are classified as atypical protein kinases []. The conformation of ATP when bound to the RIO kinases is unique when compared with ePKs, such as serine/threonine kinases or the insulin receptor tyrosine kinase, suggesting that the detailed mechanism by which the catalytic aspartate of RIO kinases participates in phosphoryl transfer may not be identical to that employed in known serine/threonine ePKs. Representatives of the RIO family are present in organisms varying from Archaea to humans, although the RIO3 proteins have only been identified in multicellular eukaryotes, to date. Yeast Rio1 and Rio2 proteins are required for proper cell cycle progression and chromosome maintenance, and are necessary for survival of the cells. These proteins are involved in the processing of 20 S pre-rRNA via late 18 S rRNA processing. ; GO: 0003824 catalytic activity, 0005524 ATP binding; PDB: 1TQP_A 1ZAR_A 1TQI_A 1ZAO_A 1TQM_A 3RE4_A 1ZTH_B 1ZP9_A 1ZTF_A.

>KOG1035|consensus

Probab=95.86  E-value=0.041  Score=50.56  Aligned_cols=125  Identities=19%  Similarity=0.193  Sum_probs=77.0

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      +...-|+..+.++.|+|++.++.+=.+..    ..+....+..++|..-++...        ....+.+. .++.+||.+
T Consensus       227 ~~~E~e~~~l~k~~~~n~~~~~~~~le~~----~~g~~~~v~~~~~s~~~~~~~~q~v~~i~~~~~r~~~-~~~~~GL~~  301 (1351)
T KOG1035|consen  227 QTTEIELESLSKIAHDNLGGYFVYGLERL----FRGIVLDVLQEICSKVELRSLLQSVGSIPLETLRILH-QKLLEGLAY  301 (1351)
T ss_pred             HHHHHHHHHHHhhccccccceeEEeehhh----cchHHHHHHHhhcCccchHHHHhhccccCHHHHHHHH-HHHhhhHHH
Confidence            33445777788899999999988732211    111233456677776666553        23455566 799999999


Q ss_pred             HhhcC-----------------CCCeEEEe--cCCcccccc----------cccccCCCCccccccCCCCc--hhHHHHH
Q psy7174         101 LKSSM-----------------PALLKKFV--GIGIGRHVC----------TLYCTRGAPELLFGARMYGV--GIDMWAV  149 (188)
Q Consensus       101 lH~~~-----------------~~~ilkl~--dfg~~~~~~----------~~~y~~~aPe~~~~~~~~~~--~~Diwsl  149 (188)
                      +|+..                 ++....++  ||+.+...+          ...+  .++|...... +..  ..|+|.+
T Consensus       302 ~h~~~l~~v~L~~s~~~~~~~~~e~~~~~sl~~~~ss~~l~d~~~~~~~~~~~~~--~~~e~~~~~~-~~~~r~~dL~~l  378 (1351)
T KOG1035|consen  302 LHSLSLEHVVLSASSSKESTVDGEGVVAISLSDFDSSKPLPDNEKSFSDLLAEIR--NADEDLKENT-AKKSRLTDLWCL  378 (1351)
T ss_pred             HHHhccceeEEecccccccccCccceeecchhhhcccccCCCcccchhhcCcccc--cccccccccc-chhhhhhHHHHH
Confidence            99986                 12223333  665544222          2223  4666665432 333  3699999


Q ss_pred             HHHHHHHHhCCC
Q psy7174         150 GCIICELLLKAP  161 (188)
Q Consensus       150 G~il~el~~g~~  161 (188)
                      |.....+..+..
T Consensus       379 gll~~~~~~~~~  390 (1351)
T KOG1035|consen  379 GLLLLQLSQGED  390 (1351)
T ss_pred             HHHHhhhhhcCc
Confidence            999998887654

>TIGR01982 UbiB 2-polyprenylphenol 6-hydroxylase

Probab=95.84  E-value=0.037  Score=46.21  Aligned_cols=81  Identities=11%  Similarity=0.066  Sum_probs=49.5

Q ss_pred             HHHHHHHHHhCC----CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHH------HHHHHHHHHHH-HHH
Q psy7174          31 AKAEGKQDRRLD----YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH------LRYLENQQILE-GLQ   99 (188)
Q Consensus        31 ~~~E~~il~~l~----h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~------~~~~~~~qi~~-gl~   99 (188)
                      +.+|++.+.+++    |.+-+.+-.++.+       .....+++|||+.|+++.+....      ...+. .+++. .+.
T Consensus       200 f~~Ea~n~~~~~~~~~~~~~v~vP~v~~~-------~~~~~vLvmE~i~G~~L~~~~~~~~~~~~~~~ia-~~~~~~~l~  271 (437)
T TIGR01982       200 LRREAANASELGENFKNDPGVYVPEVYWD-------RTSERVLTMEWIDGIPLSDIAALDEAGLDRKALA-ENLARSFLN  271 (437)
T ss_pred             HHHHHHHHHHHHHhcCCCCCEEeCCEehh-------hcCCceEEEEeECCcccccHHHHHhcCCCHHHHH-HHHHHHHHH
Confidence            556777766653    3333444444311       12357999999999998765321      12233 34444 356


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR  119 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~  119 (188)
                      .+|..|       |.|+       ++++|||+..
T Consensus       272 ql~~~g~~H~D~hPgNilv~~~g~i~liDfG~~~  305 (437)
T TIGR01982       272 QVLRDGFFHADLHPGNIFVLKDGKIIALDFGIVG  305 (437)
T ss_pred             HHHhCCceeCCCCcccEEECCCCcEEEEeCCCee
Confidence            677777       7777       5899999864

This model represents the enzyme (UbiB) which catalyzes the first hydroxylation step in the ubiquinone biosynthetic pathway in bacteria. It is believed that the reaction is 2-polyprenylphenol - 6-hydroxy-2-polyprenylphenol. This model finds hits primarily in the proteobacteria. The gene is also known as AarF in certain species.

>COG4248 Uncharacterized protein with protein kinase and helix-hairpin-helix DNA-binding domains [General function prediction only]

Probab=95.07  E-value=0.1  Score=43.30  Aligned_cols=77  Identities=16%  Similarity=0.099  Sum_probs=53.0

Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCeE-------EEec---CCc-------ccccccccccCCCCcccc-cc---C
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALLK-------KFVG---IGI-------GRHVCTLYCTRGAPELLF-GA---R  138 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~il-------kl~d---fg~-------~~~~~~~~y~~~aPe~~~-~~---~  138 (188)
                      .... +.++.+..-||.+|       +++++       .+.|   |.+       .-.+|.+.|  ++||.-. ..   -
T Consensus       120 lrva-RnlA~aFA~lH~~Gh~vGDVn~~~~lVsd~~~V~LVdsDsfqi~~ng~~~~cpVg~~ef--tPPElQ~~~sf~g~  196 (637)
T COG4248         120 LRVA-RNLASAFATLHEHGHVVGDVNQNSFLVSDDSKVVLVDSDSFQINANGTLHLCPVGVSEF--TPPELQTLPSFVGF  196 (637)
T ss_pred             HHHH-HHHHHHHHHHHhcCCcccccCccceeeecCceEEEEcccceeeccCCceEecccCcccc--CCHHHhcccccccc
Confidence            3344 79999999999998       44442       3332   211       114577889  8999753 11   1


Q ss_pred             CCCchhHHHHHHHHHHHHHhC-CCCCCCC
Q psy7174         139 MYGVGIDMWAVGCIICELLLK-APFLPGE  166 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~~g-~~pf~~~  166 (188)
                      .-+...|-+.||+++++++.| +.||.|.
T Consensus       197 ~r~~~hD~FGLavLiF~lL~ggrHPysGI  225 (637)
T COG4248         197 ERTANHDNFGLAVLIFHLLFGGRHPYSGI  225 (637)
T ss_pred             CCCccccchhHHHHHHHHHhcCCCCCCcc
Confidence            246789999999999999875 8899763

>cd05154 ACAD10_11_like Acyl-CoA dehydrogenase (ACAD) 10 and 11, N-terminal domain, and similar proteins

Probab=94.51  E-value=0.11  Score=38.43  Aligned_cols=73  Identities=16%  Similarity=0.104  Sum_probs=50.5

Q ss_pred             hhhHHHHHHHHHHhCCC--CCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------HHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDY--ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------SHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h--~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------~~~~~~~~~qi~~g   97 (188)
                      ....+.+|.++++.+++  .++.+++.+...    . ......++++|++.+.++....       .....+. .++++.
T Consensus        38 ~~~~~~~E~~~~~~l~~~~~~vp~~~~~~~~----~-~~~~~~~~v~e~i~G~~l~~~~~~~~~~~~~~~~i~-~~i~~~  111 (223)
T cd05154          38 SAHDVAREYRVLRALAGTGVPVPKVLALCED----P-SVLGTPFYVMERVDGRVLRDRLLRPELSPEERRALA-RALADT  111 (223)
T ss_pred             ccccHHHHHHHHHHhhCCCCCCCCEEEECCC----C-CccCCceEEEEEeCCEecCCCCCCCCCCHHHHHHHH-HHHHHH
Confidence            35678899999999975  345556664210    0 0113568999999998876532       3444566 799999


Q ss_pred             HHHHhhcC
Q psy7174          98 LQALKSSM  105 (188)
Q Consensus        98 l~~lH~~~  105 (188)
                      |..||+..
T Consensus       112 l~~lH~~~  119 (223)
T cd05154         112 LAALHSVD  119 (223)
T ss_pred             HHHHhCCC
Confidence            99999975

This subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). This subfamily is composed of bacterial and eukaryotic proteins with similarity to the N-terminal domains of vertebrate ACAD10 and ACAD11. ACADs are a family of flavoproteins that are involved in the beta-oxidation of fatty acyl-CoA derivatives. ACAD deficiency can cause metabolic disorders including muscle fatigue, hypoglycemia, and hepatic lipidosis, among them. There are at least 11 distinct ACADs, some of which show distinct substrate specificities to either straight-chain or branched-chain fatty acids. ACAD10 is widely expressed in human tissues and is highly expressed in liver, kidney, pancreas, and spleen. ACAD10 and ACAD11 contain

>KOG2137|consensus

Probab=93.49  E-value=0.0076  Score=52.00  Aligned_cols=70  Identities=23%  Similarity=0.349  Sum_probs=50.1

Q ss_pred             HHHHHHHHHHhhcC--------CCCe-------EEEecCCccc--------------------ccccccccCCCCccccc
Q psy7174          92 QQILEGLQALKSSM--------PALL-------KKFVGIGIGR--------------------HVCTLYCTRGAPELLFG  136 (188)
Q Consensus        92 ~qi~~gl~~lH~~~--------~~~i-------lkl~dfg~~~--------------------~~~~~~y~~~aPe~~~~  136 (188)
                      .+++.||.|+|+.-        |+.+       .|++.|++..                    ......|  .|||.+.+
T Consensus       106 ~~v~dgl~flh~sAk~VH~ni~p~~i~~na~~~wkl~Gf~f~v~~~~~~~~p~~~yd~~lp~~~~~~~~f--~apE~~~~  183 (700)
T KOG2137|consen  106 GNVADGLAFLHRSAKVVHGNIQPEAIVVNANGDWKLAGFSFCVNANGPTEYPFSEYDPPLPLLLQPHLNF--LAPEYLLG  183 (700)
T ss_pred             hcccchhhhhccCcceeecccchhheeeccCcceeeccchhhhccCCCCccccccCCCCCChhhccCccc--ccchhhcc
Confidence            37789999999975        4433       3777777522                    1112356  89999987


Q ss_pred             cCCCCchhHHHHHHHHHHHHH-hCCCCCC
Q psy7174         137 ARMYGVGIDMWAVGCIICELL-LKAPFLP  164 (188)
Q Consensus       137 ~~~~~~~~DiwslG~il~el~-~g~~pf~  164 (188)
                      .. -+.++|++|+|+.+|-+. .|+.-+.
T Consensus       184 ~~-~~~~sd~fSlG~li~~i~~~gk~i~~  211 (700)
T KOG2137|consen  184 TT-NTPASDVFSLGVLIYTIYNGGKSIIA  211 (700)
T ss_pred             cc-ccccccceeeeeEEEEEecCCcchhh
Confidence            54 789999999999999887 4555553

>PF12260 PIP49_C: Protein-kinase domain of FAM69; InterPro: IPR022049 Family with sequence similarity 69 has three members (A, B and C)

Probab=92.62  E-value=0.74  Score=33.86  Aligned_cols=61  Identities=18%  Similarity=0.166  Sum_probs=44.9

Q ss_pred             HHHHHHHHhCCC-CCeeEEeeecccccCCCCCCCCccEEEEeccccccH-------HHH----HHHHHHHHHHHHHHHHH
Q psy7174          32 KAEGKQDRRLDY-ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK-------ARF----YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        32 ~~E~~il~~l~h-~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l-------~~~----~~~~~~~~~~qi~~gl~   99 (188)
                      ..|.-+++.+++ +++.+++|.|            ..+++.|+.+.+++       ..+    ......++ .++++.++
T Consensus         7 ~~E~lll~~l~~~~~~pk~lG~C------------G~~~v~E~~~~~~~~~~~~~l~~~~~~~w~~R~~iA-~~lL~~l~   73 (188)
T PF12260_consen    7 NNEPLLLQLLQGSEPFPKLLGSC------------GRFYVVEYVGAGSLYGIYRPLSQFLQSPWEQRAKIA-LQLLELLE   73 (188)
T ss_pred             ccHHHHHHHcCCCCCCCCeeeEC------------CCEEEEEeecCccccccccccccccccCHHHHHHHH-HHHHHHHH
Confidence            358889999986 6999999987            46889999987643       222    22334455 69999999


Q ss_pred             HHhhcC
Q psy7174         100 ALKSSM  105 (188)
Q Consensus       100 ~lH~~~  105 (188)
                      +++...
T Consensus        74 ~l~~~~   79 (188)
T PF12260_consen   74 ELDHGP   79 (188)
T ss_pred             HHhcCC
Confidence            998764

Proteins in this uncharacterised family are described as transmembrane proteins.

>PF06176 WaaY: Lipopolysaccharide core biosynthesis protein (WaaY); InterPro: IPR009330 This family consists of several bacterial lipopolysaccharide core biosynthesis proteins (WaaY or RfaY)

Probab=92.57  E-value=0.34  Score=36.71  Aligned_cols=53  Identities=13%  Similarity=0.152  Sum_probs=37.2

Q ss_pred             ccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc
Q psy7174          66 SDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR  119 (188)
Q Consensus        66 ~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~  119 (188)
                      ..++++||+.|..+.+..+.-.... ..+.+++.-+|+.|       |+|.      ++++|++-.+
T Consensus       117 ~~~ll~EYIeG~~l~d~~~i~e~~~-~ki~~~ikqlH~~G~~HGD~hpgNFlv~~~~i~iID~~~k~  182 (229)
T PF06176_consen  117 SYVLLMEYIEGVELNDIEDIDEDLA-EKIVEAIKQLHKHGFYHGDPHPGNFLVSNNGIRIIDTQGKR  182 (229)
T ss_pred             EEEEEEEEecCeecccchhcCHHHH-HHHHHHHHHHHHcCCccCCCCcCcEEEECCcEEEEECcccc
Confidence            4468999999988766432212233 46778899999988       6666      4888887644

The waaY, waaQ, and waaP genes are located in the central operon of the waa (formerly rfa) locus on the chromosome of Escherichia coli. This locus contains genes whose products are involved in the assembly of the core region of the lipopolysaccharide molecule. WaaY is the enzyme that phosphorylates HepII in this system [].; GO: 0009244 lipopolysaccharide core region biosynthetic process

>PF06293 Kdo: Lipopolysaccharide kinase (Kdo/WaaP) family; InterPro: IPR010440 Protein phosphorylation, which plays a key role in most cellular activities, is a reversible process mediated by protein kinases and phosphoprotein phosphatases

Probab=92.34  E-value=0.93  Score=33.66  Aligned_cols=74  Identities=14%  Similarity=0.107  Sum_probs=46.9

Q ss_pred             hhhHHHHHHHHHHhCCCCC--eeEEeeecccccCCCCCCCCccEEEEeccccc-cHHHHHH--------HHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYAN--IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT-TKARFYS--------HLRYLENQQIL   95 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~n--iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~-~l~~~~~--------~~~~~~~~qi~   95 (188)
                      ....+.+|.+.+.+|....  ..+.+++....   ... ....++++|++++. ++..+..        ....++ .+++
T Consensus        54 ~~~ra~~E~~~~~~L~~~Gi~tP~pva~~~~r---~~~-~~~s~lite~l~~~~~L~~~~~~~~~~~~~~~~~ll-~~l~  128 (206)
T PF06293_consen   54 RRSRAKREWRNLQRLREAGIPTPEPVAYGERR---KGG-GYRSYLITEALPGAQDLRDLLQQWEQLDPSQRRELL-RALA  128 (206)
T ss_pred             cchHHHHHHHHHHHHHHcCCCCCcEEEEEEEc---CCC-ceeEEEEEEeCCCcccHHHHHHhhcccchhhHHHHH-HHHH
Confidence            3457888999888775322  22333321110   111 24568999999874 6776543        245566 7999


Q ss_pred             HHHHHHhhcC
Q psy7174          96 EGLQALKSSM  105 (188)
Q Consensus        96 ~gl~~lH~~~  105 (188)
                      +.+.-||+.|
T Consensus       129 ~~i~~lH~~g  138 (206)
T PF06293_consen  129 RLIAKLHDAG  138 (206)
T ss_pred             HHHHHHHHCc
Confidence            9999999998

Protein kinases catalyse the transfer of the gamma phosphate from nucleotide triphosphates (often ATP) to one or more amino acid residues in a protein substrate side chain, resulting in a conformational change affecting protein function. Phosphoprotein phosphatases catalyse the reverse process. Protein kinases fall into three broad classes, characterised with respect to substrate specificity []: Serine/threonine-protein kinases Tyrosine-protein kinases Dual specific protein kinases (e.g. MEK - phosphorylates both Thr and Tyr on target proteins) Protein kinase function has been evolutionarily conserved from Escherichia coli to human []. Protein kinases play a role in a multitude of cellular processes, including division, proliferation, apoptosis, and differentiation []. Phosphorylation usually results in a functional change of the target protein by changing enzyme activity, cellular location, or association with other proteins. The catalytic subunits of protein kinases are highly conserved, and several structures have been solved [], leading to large screens to develop kinase-specific inhibitors for the treatments of a number of diseases []. This entry represents lipopolysaccharide kinases which are related to protein kinases IPR000719 from INTERPRO. This family includes waaP (rfaP) gene product is required for the addition of phosphate to O-4 of the first heptose residue of the lipopolysaccharide (LPS) inner core region. It has previously been shown that WaaP is necessary for resistance to hydrophobic and polycationic antimicrobials in E. coli and that it is required for virulence in invasive strains of Salmonella enterica [].; GO: 0005524 ATP binding, 0016773 phosphotransferase activity, alcohol group as acceptor, 0009103 lipopolysaccharide biosynthetic process, 0016020 membrane

>KOG1826|consensus

Probab=89.89  E-value=0.11  Score=49.63  Aligned_cols=121  Identities=9%  Similarity=-0.016  Sum_probs=77.8

Q ss_pred             HHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH------------HHHHHHHHHHHHHHHHH
Q psy7174          33 AEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY------------SHLRYLENQQILEGLQA  100 (188)
Q Consensus        33 ~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~------------~~~~~~~~~qi~~gl~~  100 (188)
                      .|..-++...|+++.....=.      ........+..++++.+|.+....            .-+.... ++.+.+..-
T Consensus      1278 ~e~de~~~~~h~~~~~~p~rI------~ps~s~ee~~r~~~~~~g~~f~iIikg~ee~~~ld~~~v~~~~-kvsvl~~~~ 1350 (2724)
T KOG1826|consen 1278 SERDELREAKHYLTEVDPLRI------PPSESTEEYIRSLYVEFGKLFSIIIKGLEESPDLDRSPVHLRH-KVSVLNRNV 1350 (2724)
T ss_pred             hhhhhhhhhhceeeecccccC------CCCCChHHHHHHHHHHHhHHHHHHHhccccCCcchhchHHHHH-HHHHhccch
Confidence            344455567899988876521      234456779999999999987641            1122222 343555555


Q ss_pred             HhhcC---------------CC----CeEEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHH
Q psy7174         101 LKSSM---------------PA----LLKKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVG  150 (188)
Q Consensus       101 lH~~~---------------~~----~ilkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG  150 (188)
                      +|+..               |-    .-+|+.++|+.+           .++++.|  +.|+....-. ++.++|+|+.|
T Consensus      1351 ~ls~tnlg~T~v~~~Lkf~lpmIVtny~v~~gk~gLdKIknp~~sf~Gl~l~sp~~--v~qli~N~ik-~t~rsdilr~s 1427 (2724)
T KOG1826|consen 1351 ILSLTNLGNTNVSKSLKFTLPMIVTNYNVKLGKGGLDKIKNPVLSFFGLELCSPIY--VLQLIKNEIK-FTKRSDILRRS 1427 (2724)
T ss_pred             hhhcccCCccchhhhhhhhccceecCCcccccccccccccCchHhhhhhhhCCHHH--HHHHHHHHHh-hhhHHHHHHHH
Confidence            55543               11    114778888765           2345555  6666665544 88889999999


Q ss_pred             HHHHHHHhCCCCC
Q psy7174         151 CIICELLLKAPFL  163 (188)
Q Consensus       151 ~il~el~~g~~pf  163 (188)
                      +.+|+..-|..+|
T Consensus      1428 ~~ly~rs~~n~~f 1440 (2724)
T KOG1826|consen 1428 LSLYLRSDGNAYF 1440 (2724)
T ss_pred             HHHHHHhcccHHH
Confidence            9999988777766

>PLN02876 acyl-CoA dehydrogenase

Probab=88.29  E-value=1.6  Score=39.55  Aligned_cols=72  Identities=13%  Similarity=0.079  Sum_probs=48.1

Q ss_pred             hhHHHHHHHHHHhCC-CCCe--eEEeeecccccCCCCCCCCccEEEEeccccccHHHH------HHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLD-YANI--IQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF------YSHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~-h~ni--v~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~------~~~~~~~~~~qi~~gl   98 (188)
                      ...+.+|+++++.+. |+++  .+.+.+|..    . ......+++||++.+..+...      ......+. .+++..|
T Consensus        82 ~~~~~rE~~~l~~L~~~~~vpVP~v~~~~~d----~-~v~G~~flVME~v~G~~~~~~~~~~~~~~~r~~l~-~~l~~~L  155 (822)
T PLN02876         82 AHAVEREYQVLRALGEHTDVPVPKVYCLCTD----A-SVIGTAFYIMEYLEGRIFVDPKLPGVAPERRRAIY-RATAKVL  155 (822)
T ss_pred             HHHHHHHHHHHHHHhhcCCCCCCcEEEEecC----C-CcCCCceEEEEecCCcccCCccCCCCCHHHHHHHH-HHHHHHH
Confidence            346889999999996 6664  666665411    0 112357899999998754321      22344455 7899999


Q ss_pred             HHHhhcC
Q psy7174          99 QALKSSM  105 (188)
Q Consensus        99 ~~lH~~~  105 (188)
                      ..||+..
T Consensus       156 a~LH~vd  162 (822)
T PLN02876        156 AALHSAD  162 (822)
T ss_pred             HHHhCCC
Confidence            9999964

>PRK04750 ubiB putative ubiquinone biosynthesis protein UbiB; Reviewed

Probab=88.22  E-value=0.99  Score=38.80  Aligned_cols=18  Identities=11%  Similarity=0.093  Sum_probs=15.1

Q ss_pred             CccEEEEeccccccHHHH
Q psy7174          65 SSDYIVVKIFTKTTKARF   82 (188)
Q Consensus        65 ~~~~iv~e~~~~~~l~~~   82 (188)
                      ...+++|||+.|+.+.++
T Consensus       234 t~~VLvmE~i~G~~l~d~  251 (537)
T PRK04750        234 SETVMVMERMYGIPVSDV  251 (537)
T ss_pred             CCceEEEeeecCccHHhH
Confidence            467899999999998764

>PRK15123 lipopolysaccharide core heptose(I) kinase RfaP; Provisional

Probab=87.50  E-value=2.8  Score=32.70  Aligned_cols=69  Identities=13%  Similarity=0.167  Sum_probs=44.9

Q ss_pred             HHHHHHHHHHhCCC-----CCeeEEeeecccccCCCCCCCCccEEEEeccccc-cHHHHHH----------HHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLDY-----ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT-TKARFYS----------HLRYLENQQ   93 (188)
Q Consensus        30 ~~~~E~~il~~l~h-----~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~-~l~~~~~----------~~~~~~~~q   93 (188)
                      .+.+|.+.+.+|..     |.+|-+..-      .........++++|++++. ++.++..          ....++ ++
T Consensus        74 ~a~rE~~~l~~L~~~GIptP~pVa~~e~------~~~~~~~~s~LVte~l~~~~sL~~~~~~~~~~~~~~~~~~~ll-~~  146 (268)
T PRK15123         74 GADREWRAIHRLHEVGVDTMTGVAFGER------GSNPATRTSFIITEDLAPTISLEDYCADWATNPPDPRLKRMLI-KR  146 (268)
T ss_pred             HHHHHHHHHHHHHHcCCCCCCeeEEEEe------cCCCccceeEEEEeeCCCCccHHHHHHhhcccCCCHHHHHHHH-HH
Confidence            47899999888753     333333210      0111134578999999886 6766532          334566 78


Q ss_pred             HHHHHHHHhhcC
Q psy7174          94 ILEGLQALKSSM  105 (188)
Q Consensus        94 i~~gl~~lH~~~  105 (188)
                      ++..+.-||+.|
T Consensus       147 la~~i~~LH~~G  158 (268)
T PRK15123        147 VATMVRDMHAAG  158 (268)
T ss_pred             HHHHHHHHHHCc
Confidence            999999999998

>cd05150 APH Aminoglycoside 3'-phosphotransferase (APH)

Probab=85.13  E-value=3.3  Score=31.30  Aligned_cols=69  Identities=12%  Similarity=0.145  Sum_probs=46.4

Q ss_pred             hhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--HHHHHHHHHHHHHHHHHHhhc
Q psy7174          28 ETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--SHLRYLENQQILEGLQALKSS  104 (188)
Q Consensus        28 ~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--~~~~~~~~~qi~~gl~~lH~~  104 (188)
                      ..+..+|+++++.+. +--+.+++++.        ..+...+++||+++|..+....  .....+. .++.+.+.-||+.
T Consensus        35 ~~~~~~E~~~l~~l~~~~~vP~v~~~~--------~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~-~~l~~~l~~lH~i  105 (244)
T cd05150          35 TYELEREAERLRWLAGKLPVPEVIDYG--------SDDGRAWLLTSAVPGVPAAALWEELEPERLV-DALAEALRRLHAL  105 (244)
T ss_pred             ccchHHHHHHHHHHHhcCCCCeEEEEE--------ecCCccEEEEEeeCCccHhHhhcccCHHHHH-HHHHHHHHHHhcC
Confidence            346778999998885 33344555542        1224579999999998887542  2223345 6889999999987


Q ss_pred             C
Q psy7174         105 M  105 (188)
Q Consensus       105 ~  105 (188)
                      .
T Consensus       106 ~  106 (244)
T cd05150         106 P  106 (244)
T ss_pred             C
Confidence            4

The APH subfamily is part of a larger superfamily that includes the catalytic domains of other kinases, such as the typical serine/threonine/tyrosine protein kinases (PKs), RIO kinases, actin-fragmin kinase (AFK), and phosphoinositide 3-kinase (PI3K). APH catalyzes the transfer of the gamma-phosphoryl group from ATP to aminoglycoside antibiotics such as kanamycin, streptomycin, neomycin, and gentamicin, among others. The aminoglycoside antibiotics target the 30S ribosome and promote miscoding, leading to the production of defective proteins which insert into the bacterial membrane, resulting in membrane damage and the ultimate demise of the bacterium. Phosphorylation of the aminoglycoside antibiotics results in their inactivation, leading to bacterial antibiotic resistance. The APH gene is found on transposons and plasmids and is thought to have originated as a self-defense mechanism used by microorganisms that produce the antibio

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	188
1ua2_A	346	Crystal Structure Of Human Cdk7 Length = 346		2e-26
3gbz_A	329	Structure Of The Cmgc Cdk Kinase From Giardia Lambl		3e-15
1gz8_A	299	Human Cyclin Dependent Kinase 2 Complexed With The		6e-15
4erw_A	306	Cdk2 In Complex With Staurosporine Length = 306		7e-15
1pf8_A	298	Crystal Structure Of Human Cyclin-dependent Kinase		7e-15
1gii_A	298	Human Cyclin Dependent Kinase 2 Complexed With The		7e-15
1w98_A	298	The Structural Basis Of Cdk2 Activation By Cyclin E		8e-15
1oit_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-15
2w17_A	299	Cdk2 In Complex With The Imidazole Pyrimidine Amide		8e-15
1e9h_A	297	Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex		8e-15
3ezr_A	300	Cdk-2 With Indazole Inhibitor 17 Bound At Its Activ		8e-15
2jgz_A	289	Crystal Structure Of Phospho-Cdk2 In Complex With C		8e-15
1fin_A	298	Cyclin A-Cyclin-Dependent Kinase 2 Complex Length =		8e-15
3pj8_A	299	Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]		8e-15
1jst_A	298	Phosphorylated Cyclin-Dependent Kinase-2 Bound To C		8e-15
1qmz_A	299	Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Com		8e-15
3qhr_A	298	Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic		8e-15
3bht_A	300	Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN		8e-15
1oir_A	299	Imidazopyridines: A Potent And Selective Class Of C		8e-15
4i3z_A	296	Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNES		8e-15
1h01_A	298	Cdk2 In Complex With A Disubstituted 2, 4-Bis Anili		8e-15
4eoo_A	299	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		8e-15
4eon_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		8e-15
4eoi_A	299	Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyc		8e-15
4eoq_A	301	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		8e-15
4bcq_A	301	Structure Of Cdk2 In Complex With Cyclin A And A 2-		8e-15
4eos_A	300	Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Co		9e-15
4eop_A	300	Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3		9e-15
1vyw_A	309	Structure Of Cdk2CYCLIN A WITH PNU-292137 Length =		9e-15
4eom_A	301	Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Hum		9e-15
4eok_A	300	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-15
3pxf_A	306	Cdk2 In Complex With Two Molecules Of 8-Anilino-1-N		9e-15
2iw8_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82		9e-15
2iw6_A	302	Structure Of Human Thr160-Phospho Cdk2-Cyclin A Com		9e-15
1ogu_A	302	Structure Of Human Thr160-phospho Cdk2/cyclin A Com		9e-15
4eoj_A	302	Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Huma		9e-15
1h1p_A	303	Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMP		1e-14
1v0b_A	288	Crystal Structure Of The T198a Mutant Of Pfpk5 Leng		2e-14
1v0o_A	288	Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulpho		6e-14
1ob3_A	288	Structure Of P. Falciparum Pfpk5 Length = 288		6e-14
1h4l_A	292	Structure And Regulation Of The Cdk5-P25(Nck5a) Com		8e-14
4e7w_A	394	Structure Of Gsk3 From Ustilago Maydis Length = 394		2e-13
1ung_A	292	Structural Mechanism For The Inhibition Of Cdk5-P25		2e-13
1i09_A	420	Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Len		2e-13
1q3d_A	424	Gsk-3 Beta Complexed With Staurosporine Length = 42		2e-13
1pyx_A	422	Gsk-3 Beta Complexed With Amp-Pnp Length = 422		2e-13
1q5k_A	414	Crystal Structure Of Glycogen Synthase Kinase 3 In		3e-13
4acc_A	465	Gsk3b In Complex With Inhibitor Length = 465		3e-13
1r0e_A	391	Glycogen Synthase Kinase-3 Beta In Complex With 3-I		3e-13
2o5k_A	372	Crystal Structure Of Gsk3beta In Complex With A Ben		3e-13
1h8f_A	352	Glycogen Synthase Kinase 3 Beta. Length = 352		3e-13
3sd0_A	350	Identification Of A Glycogen Synthase Kinase-3b Inh		3e-13
1uv5_A	350	Glycogen Synthase Kinase 3 Beta Complexed With 6-Br		3e-13
2pk9_A	317	Structure Of The Pho85-pho80 Cdk-cyclin Complex Of		4e-13
3say_A	430	Crystal Structure Of Human Glycogen Synthase Kinase		4e-13
4dit_A	382	Crystal Structure Of Gsk3beta In Complex With A Imi		4e-13
4afj_A	367	5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selec		5e-13
1gng_A	378	Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With		5e-13
3zrk_A	371	Identification Of 2-(4-Pyridyl)thienopyridinones As		5e-13
2ow3_A	352	Glycogen Synthase Kinase-3 Beta In Complex With Bis		5e-13
3zdi_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-13
3f88_A	349	Glycogen Synthase Kinase 3beta Inhibitor Complex Le		5e-13
1o9u_A	350	Glycogen Synthase Kinase 3 Beta Complexed With Axin		5e-13
3f7z_A	350	X-ray Co-crystal Structure Of Glycogen Synthase Kin		6e-13
3gb2_A	353	Gsk3beta Inhibitor Complex Length = 353		6e-13
3niz_A	311	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-13
2qkr_A	313	Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5		9e-13
3eb0_A	383	Crystal Structure Of Cgd4_240 From Cryptosporidium		2e-12
3mtl_A	324	Crystal Structure Of The Pctaire1 Kinase In Complex		7e-12
3kvw_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		2e-11
4azf_A	417	Human Dyrk2 In Complex With Leucettine L41 Length =		2e-11
3k2l_A	429	Crystal Structure Of Dual-Specificity Tyrosine Phos		5e-11
4aaa_A	331	Crystal Structure Of The Human Cdkl2 Kinase Domain		7e-11
2w99_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-11
2w96_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-11
2w9f_B	306	Crystal Structure Of Cdk4 In Complex With A D-Type		9e-11
3g33_A	308	Crystal Structure Of Cdk4CYCLIN D3 Length = 308		9e-11
3sa0_A	360	Complex Of Erk2 With Norathyriol Length = 360		1e-10
4fv7_A	360	Crystal Structure Of The Erk2 Complexed With E94 Le		1e-10
4fux_A	360	Crystal Structure Of The Erk2 Complexed With E75 Le		1e-10
4gsb_A	364	Monoclinic Crystal Form Of The Apo-Erk2 Length = 36		1e-10
3oz6_A	388	Crystal Structure Of Mapk From Cryptosporidium Parv		1e-10
4fv6_A	360	Crystal Structure Of The Erk2 Complexed With E57 Le		1e-10
4h3q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-10
3qyw_A	364	Crystal Structure Of Erk2 In Complex With An Inhibi		1e-10
3tei_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-10
1pme_A	380	Structure Of Penta Mutant Human Erk2 Map Kinase Com		1e-10
2y9q_A	362	Crystal Structure Of Human Erk2 Complexed With A Ma		1e-10
1bi8_A	326	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		2e-10
1gol_A	364	Coordinates Of Rat Map Kinase Erk2 With An Arginine		2e-10
3zu7_A	365	Crystal Structure Of A Designed Selected Ankyrin Re		2e-10
2z7l_A	366	Unphosphorylated Mitogen Activated Protein Kinase E		2e-10
3c9w_A	357	Crystal Structure Of Erk-2 With Hypothemycin Covale		2e-10
2fys_B	364	Crystal Structure Of Erk2 Complex With Kim Peptide		2e-10
2ojg_A	380	Crystal Structure Of Erk2 In Complex With N,n-dimet		2e-10
3o71_A	358	Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length		2e-10
3nup_A	307	Cdk6 (Monomeric) In Complex With Inhibitor Length =		2e-10
1wzy_A	368	Crystal Structure Of Human Erk2 Complexed With A Py		2e-10
1tvo_A	368	The Structure Of Erk2 In Complex With A Small Molec		2e-10
1jow_B	308	Crystal Structure Of A Complex Of Human Cdk6 And A		2e-10
3zuv_A	364	Crystal Structure Of A Designed Selected Ankyrin Re		2e-10
2erk_A	365	Phosphorylated Map Kinase Erk2 Length = 365		2e-10
2zoq_A	382	Structural Dissection Of Human Mitogen-Activated Ki		2e-10
2gph_A	364	Docking Motif Interactions In The Map Kinase Erk2 L		2e-10
3rgf_A	405	Crystal Structure Of Human Cdk8CYCC Length = 405		3e-10
3e3p_A	360	Glycogen Synthase Kinase From Leishmania Major Leng		3e-10
4agu_A	311	Crystal Structure Of The Human Cdkl1 Kinase Domain		4e-10
3r63_A	358	Structure Of Erk2 (Spe) Mutant (S246e) Length = 358		5e-10
4e5a_X	360	The W197a Mutant Of P38a Map Kinase Length = 360		1e-09
3o8p_A	360	Conformational Plasticity Of P38 Map Kinase Dfg Mot		2e-09
3gc9_A	370	The Structure Of P38beta C119s, C162s In Complex Wi		3e-09
4ec8_A	373	Structure Of Full Length Cdk9 In Complex With Cycli		3e-09
3gp0_A	348	Crystal Structure Of Human Mitogen Activated Protei		3e-09
3gc8_A	370	The Structure Of P38beta C162s In Complex With A Di		3e-09
3mi9_A	351	Crystal Structure Of Hiv-1 Tat Complexed With Human		4e-09
4bcf_A	331	Structure Of Cdk9 In Complex With Cyclin T And A 2-		4e-09
3blh_A	331	Crystal Structure Of Human Cdk9CYCLINT1 Length = 33		4e-09
1ywr_A	360	Crystal Structure Analysis Of Inactive P38 Kinase D		5e-09
1yw2_A	360	Mutated Mus Musculus P38 Kinase (Mp38) Length = 360		5e-09
2ghl_A	348	Mutant Mus Musculus P38 Kinase Domain In Complex Wi		6e-09
2fsl_X	367	Mitogen Activated Protein Kinase P38alpha (D176a+f3		8e-09
2fso_X	367	Mitogen Activated Protein Kinase P38alpha (D176a) A		8e-09
2fst_X	367	Mitogen Activated Protein Kinase P38alpha (d176a+f3		8e-09
3d83_A	360	Crystal Structure Of P38 Kinase In Complex With A B		8e-09
2bal_A	365	P38alpha Map Kinase Bound To Pyrazoloamine Length =		9e-09
2oza_B	366	Structure Of P38alpha Complex Length = 366		9e-09
2baq_A	365	P38alpha Bound To Ro3201195 Length = 365		9e-09
1na7_A	329	Crystal Structure Of The Catalytic Subunit Of Human		9e-09
1ian_A	366	Human P38 Map Kinase Inhibitor Complex Length = 366		9e-09
2r7i_A	335	Crystal Structure Of Catalytic Subunit Of Protein K		9e-09
3nsz_A	330	Human Ck2 Catalytic Domain In Complex With Amppn Le		1e-08
3mb6_A	331	Human Ck2 Catalytic Domain In Complex With A Difura		1e-08
2y8o_A	362	Crystal Structure Of Human P38alpha Complexed With		1e-08
3q04_A	328	Crystal Structure Of The Apo-Form Of Human Ck2 Alph		1e-08
3d7z_A	360	Crystal Structure Of P38 Kinase In Complex With A B		1e-08
1lew_A	360	Crystal Structure Of Map Kinase P38 Complexed To Th		1e-08
3h30_A	334	Crystal Structure Of The Catalytic Subunit Of Human		1e-08
3nga_A	333	Human Ck2 Catalytic Domain In Complex With Cx-4945		1e-08
2baj_A	365	P38alpha Bound To Pyrazolourea Length = 365		1e-08
1ove_A	366	The Structure Of P38 Alpha In Complex With A Dihydr		1e-08
3p4k_A	370	The Third Conformation Of P38a Map Kinase Observed		1e-08
3hrb_A	359	P38 Kinase Crystal Structure In Complex With Small		1e-08
2npq_A	367	A Novel Lipid Binding Site In The P38 Alpha Map Kin		1e-08
3k3j_A	362	P38alpha Bound To Novel Dfg-Out Compound Pf-0041612		1e-08
1di9_A	360	The Structure Of P38 Mitogen-Activated Protein Kina		1e-08
1jwh_A	337	Crystal Structure Of Human Protein Kinase Ck2 Holoe		1e-08
3s3i_A	349	P38 Kinase Crystal Structure In Complex With Small		1e-08
3oef_X	360	Crystal Structure Of Y323f Inactive Mutant Of P38al		1e-08
3ody_X	360	Crystal Structure Of P38alpha Y323q Active Mutant L		1e-08
3od6_X	360	Crystal Structure Of P38alpha Y323t Active Mutant L		1e-08
3e92_A	371	Crystal Structure Of P38 Kinase In Complex With A B		1e-08
1pjk_A	334	Crystal Structure Of A C-terminal Deletion Mutant O		1e-08
3zsg_A	362	X-Ray Structure Of P38alpha Bound To Tak-715 Length		1e-08
3q9w_A	336	Crystal Structure Of Human Ck2 Alpha In Complex Wit		1e-08
3juh_A	335	Crystal Structure Of A Mutant Of Human Protein Kina		1e-08
3bqc_A	335	High Ph-Value Crystal Structure Of Emodin In Comple		1e-08
4dgl_C	335	Crystal Structure Of The Ck2 Tetrameric Holoenzyme		1e-08
3odz_X	360	Crystal Structure Of P38alpha Y323r Active Mutant L		1e-08
3hec_A	348	P38 In Complex With Imatinib Length = 348		1e-08
2puu_A	348	Crystal Structure Of P38 Complex With 1-(5-Tert-But		1e-08
2gtm_A	348	Mutated Mouse P38 Map Kinase Domain In Complex With		1e-08
2lgc_A	359	Joint Nmr And X-Ray Refinement Reveals The Structur		1e-08
3nnx_A	354	Crystal Structure Of Phosphorylated P38 Alpha In Co		1e-08
1zzl_A	351	Crystal Structure Of P38 With Triazolopyridine Leng		1e-08
3nnu_A	354	Crystal Structure Of P38 Alpha In Complex With Dp13		1e-08
3gcu_A	360	Human P38 Map Kinase In Complex With Rl48 Length =		1e-08
3mpt_A	371	Crystal Structure Of P38 Kinase In Complex With A P		1e-08
3k3i_A	350	P38alpha Bound To Novel Dgf-Out Compound Pf-0021595		1e-08
1oz1_A	372	P38 Mitogen-Activated Kinase In Complex With 4-Azai		1e-08
3hvc_A	362	Crystal Structure Of Human P38alpha Map Kinase Leng		1e-08
2gfs_A	372	P38 Kinase Crystal Structure In Complex With Ro3201		1e-08
3u87_A	349	Structure Of A Chimeric Construct Of Human Ck2alpha		1e-08
3fi4_A	372	P38 Kinase Crystal Structure In Complex With Ro4499		1e-08
1m7q_A	366	Crystal Structure Of P38 Map Kinase In Complex With		1e-08
3oht_A	389	Crystal Structure Of Salmo Salar P38alpha Length =		1e-08
1bl6_A	379	The Complex Structure Of The Map Kinase P38SB216995		1e-08
3kq7_A	380	Structure Of Human P38alpha With N-[4-Methyl-3-(6-{		1e-08
2zjw_A	340	Crystal Structure Of Human Ck2 Alpha Complexed With		1e-08
3tg1_A	380	Crystal Structure Of P38alpha In Complex With A Map		1e-08
1bmk_A	379	The Complex Structure Of The Map Kinase P38SB218655		1e-08
3dt1_A	383	P38 Complexed With A Quinazoline Inhibitor Length =		1e-08
2b9f_A	353	Crystal Structure Of Non-Phosphorylated Fus3 Length		1e-08
3mh0_A	360	Mutagenesis Of P38 Map Kinase Eshtablishes Key Role		1e-08
4ewq_A	383	Human P38 Alpha Mapk In Complex With A Pyridazine B		1e-08
3mh2_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		1e-08
3py3_A	380	Crystal Structure Of Phosphorylated P38alpha Map Ki		2e-08
2b9h_A	353	Crystal Structure Of Fus3 With A Docking Motif From		2e-08
2f9g_A	353	Crystal Structure Of Fus3 Phosphorylated On Tyr182		2e-08
3ofm_A	350	Structure Of A Human Ck2alpha Prime, The Paralog Is		2e-08
3e3b_X	339	Crystal Structure Of Catalytic Subunit Of Human Pro		2e-08
3mh3_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		2e-08
3mh1_A	360	Mutagenesis Of P38 Map Kinase Establishes Key Roles		3e-08
3gcp_A	360	Human P38 Map Kinase In Complex With Sb203580 Lengt		3e-08
4b99_A	398	Crystal Structure Of Mapk7 (Erk5) With Inhibitor Le		5e-08
4ic7_A	442	Crystal Structure Of The Erk5 Kinase Domain In Comp		6e-08
3gi3_A	360	Crystal Structure Of A N-Phenyl-N'-Naphthylurea Ana		9e-08
3coi_A	353	Crystal Structure Of P38delta Kinase Length = 353		9e-08
3npc_A	364	Crystal Structure Of Jnk2 Complexed With Birb796 Le		1e-07
1cm8_A	367	Phosphorylated Map Kinase P38-Gamma Length = 367		1e-07
4exu_A	371	Mapk13, Inactive Form Length = 371		1e-07
2vx3_A	382	Crystal Structure Of The Human Dual Specificity Tyr		1e-07
4aze_A	382	Human Dyrk1a In Complex With Leucettine L41 Length		1e-07
3anq_A	368	Human Dyrk1aINHIBITOR COMPLEX Length = 368		1e-07
3vuk_A	370	Crystal Structure Of A Cysteine-deficient Mutant M5		2e-07
3vui_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-07
3vuh_A	370	Crystal Structure Of A Cysteine-deficient Mutant M3		3e-07
3vug_A	370	Crystal Structure Of A Cysteine-deficient Mutant M2		3e-07
3vud_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		3e-07
2i6l_A	320	Crystal Structure Of Human Mitogen Activated Protei		9e-07
2xs0_A	386	Linear Binding Motifs For Jnk And For Calcineurin A		1e-06
1ukh_A	369	Structural Basis For The Selective Inhibition Of Jn		1e-06
2xrw_A	371	Linear Binding Motifs For Jnk And For Calcineurin A		1e-06
3v3v_A	379	Structural And Functional Analysis Of Quercetagetin		1e-06
3fi3_A	364	Crystal Structure Of Jnk3 With Indazole Inhibitor,		1e-06
3fi2_A	353	Crystal Structure Of Jnk3 With Amino-Pyrazole Inhib		1e-06
3fv8_A	355	Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Le		1e-06
3kvx_A	364	Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Le		1e-06
2g01_A	370	Pyrazoloquinolones As Novel, Selective Jnk1 Inhibit		1e-06
3pze_A	358	Jnk1 In Complex With Inhibitor Length = 358		1e-06
3elj_A	369	Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine		1e-06
2r9s_A	356	C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Qu		2e-06
1jnk_A	423	The C-Jun N-Terminal Kinase (Jnk3s) Complexed With		2e-06
2o0u_A	364	Crystal Structure Of Human Jnk3 Complexed With N-{3		2e-06
1pmn_A	364	Crystal Structure Of Jnk3 In Complex With An Imidaz		2e-06
3ptg_A	363	Design And Synthesis Of A Novel, Orally Efficacious		2e-06
3oxi_A	362	Design And Synthesis Of Disubstituted Thiophene And		2e-06
2ok1_A	365	Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3		2e-06
3vum_A	370	Crystal Structure Of A Cysteine-deficient Mutant M7		2e-06
3o17_A	370	Crystal Structure Of Jnk1-Alpha1 Isoform Length = 3		2e-06
3ttj_A	464	Crystal Structure Of Jnk3 Complexed With Cc-359, A		2e-06
2exc_X	356	Inhibitor Complex Of Jnk3 Length = 356		2e-06
4h36_A	356	Crystal Structure Of Jnk3 In Complex With Atf2 Pept		2e-06
3pvg_A	331	Crystal Structure Of Z. Mays Ck2 Alpha Subunit In C		2e-06
2qc6_A	332	Protein Kinase Ck2 In Complex With Dbc Length = 332		2e-06
2b1p_A	355	Inhibitor Complex Of Jnk3 Length = 355		2e-06
4dgn_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-06
3vul_A	370	Crystal Structure Of A Cysteine-deficient Mutant M1		2e-06
4dgm_A	326	Crystal Structure Of Maize Ck2 In Complex With The		2e-06
4anm_A	335	Complex Of Ck2 With A Cdc7 Inhibitor Length = 335		2e-06
3kxg_A	327	Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subun		2e-06
1ds5_A	332	Dimeric Crystal Structure Of The Alpha Subunit In C		2e-06
1m2p_A	325	Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- Anthra		2e-06
1daw_A	327	Crystal Structure Of A Binary Complex Of Protein Ki		2e-06
2pvh_A	352	Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]tri		2e-06
3e7o_A	360	Crystal Structure Of Jnk2 Length = 360		2e-06
3rp9_A	458	Crystal Structure Of The Apo Mapk From Toxoplasma G		5e-06
3n9x_A	432	Crystal Structure Of Map Kinase From Plasmodium Ber		6e-06
3uib_A	362	Map Kinase Lmampk10 From Leishmania Major In Comple		2e-05
3pg1_A	362	Map Kinase Lmampk10 From Leishmania Major (1.95 Ang		2e-05
3nie_A	429	Crystal Structure Of Pf11_0147 Length = 429		5e-05

>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7 Length = 346

Iteration: 1
 Score =  115 bits (288), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 49/59 (83%), Positives = 56/59 (94%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP+E+ WP
Sbjct: 180 APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP 238

>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia Length = 329

Iteration: 1
 Score = 78.2 bits (191), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 42/58 (72%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PE+L G+R Y   +D+W++ CI  E+L+K P  PG+S++DQL +IF+ LG P + TWP
Sbjct: 206 PEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP 263

>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine Length = 299

Iteration: 1
 Score = 77.0 bits (188), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine Length = 306

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 46/68 (67%), Gaps = 2/68 (2%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           V TL+    APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLG
Sbjct: 171 VVTLWYR--APEILLGXKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLG 228
Query: 181 TPSEDTWP 188
           TP E  WP
Sbjct: 229 TPDEVVWP 236

>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2 Complexed With A Nucleoside Inhibitor Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-dependent Kinase Inhibitors Identified Through Structure-based Hybridisation Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide, Compound (S)-8b Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With The Inhibitor Indirubin-5-Sulphonate Bound Length = 297

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230

>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B Length = 289

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230

>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX WITH THE Inhibitor Meriolin 3 Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230

>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of Cyclin-Dependent Kinase Inhibitors Identified Through Structure-Based Hybridisation Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM IONS Length = 296

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino Pyrimidine Cdk4 Inhibitor Length = 298

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 170 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 228

>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With Atp Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230

>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 172 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 230

>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 299

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 171 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 229

>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232

>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 301

Iteration: 1
 Score = 76.6 bits (187), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231

>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231

>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3 Complex With The Inhibitor Ro3306 Length = 300

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231

>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137 Length = 309

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233

>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human Cyclin A3 Complex With Atp Length = 301

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232

>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With The Inhibitor Nu6102 Length = 300

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 173 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 231

>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of 8-Anilino-1-Naphthalene Sulfonate Length = 306

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 178 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 236

>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v- H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor Length = 302

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232

>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed With A Bisanilinopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232

>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed With A 2-arylamino-4-cyclohexylmethyl-5-nitroso-6- aminopyrimidine Inhibitor Length = 302

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232

>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human Cyclin A3 Complex With Atp Length = 302

Iteration: 1
 Score = 76.3 bits (186), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 174 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 232

>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED With The Inhibitor Nu2058 Length = 303

Iteration: 1
 Score = 76.3 bits (186), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP E  WP
Sbjct: 175 APEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP 233

>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5 Length = 288

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 30/59 (50%), Positives = 41/59 (69%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G++ Y   ID+W+VGCI  E++  AP  PG S+ DQL RIF+ LGTP+   WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGAPLFPGVSEADQLMRIFRILGTPNSKNWP 226

>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate Ligand Complex Length = 288

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ LGTP+   WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226

>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5 Length = 288

Iteration: 1
 Score = 73.6 bits (179), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ LGTP+   WP
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP 226

>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex Length = 292

Iteration: 1
 Score = 73.2 bits (178), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           P++LFGA++Y   IDMW+ GCI  EL   A P  PG    DQL RIF+ LGTP+E+ WP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAARPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis Length = 394

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 42/65 (64%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ EL+   P  PGES +DQL  I + LG
Sbjct: 202 ICSRYYR--APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG 259
Query: 181 TPSED 185
           TPS +
Sbjct: 260 TPSRE 264

>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By Roscovitine, Aloisine And Indirubin. Length = 292

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 1/59 (1%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKA-PFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+ LGTP+E+ WP
Sbjct: 170 PDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP 228

>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b) Length = 420

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 216 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 273
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 274 GTPTRE 279

>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine Length = 424

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 220 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 277
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 278 GTPTRE 283

>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp Length = 422

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 218 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 275
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 276 GTPTRE 281

>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In Complexed With Inhibitor Length = 414

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 210 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 267
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 268 GTPTRE 273

>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor Length = 465

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 261 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 318
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 319 GTPTRE 324

>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With 3-Indolyl-4- Arylmaleimide Inhibitor Length = 391

Iteration: 1
 Score = 71.6 bits (174), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 187 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 244
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 245 GTPTRE 250

>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Benzoimidazol Inhibitor Length = 372

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 195 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 252
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 253 GTPTRE 258

>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta. Length = 352

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 182 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 240 GTPTRE 245

>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor That Attenuates Hyperactivity In Clock Mutant Mice Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 182 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 240 GTPTRE 245

>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With 6-Bromoindirubin-3'-Oxime Length = 350

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 31/66 (46%), Positives = 44/66 (66%), Gaps = 2/66 (3%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + L
Sbjct: 182 YICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVL 239
Query: 180 GTPSED 185
           GTP+ +
Sbjct: 240 GTPTRE 245

>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The Phosphate-responsive Signal Transduction Pathway Length = 317

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G+R Y   ID+W+ GCI+ E++   P  PG +D +QL  IF  +GTP+E  WP
Sbjct: 176 APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP 234

>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta (Gsk3b) In Complex With Inhibitor 142 Length = 430

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 217 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 274
Query: 181 TPSED 185
           TP+ +
Sbjct: 275 TPTRE 279

>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A Imidazopyridine Inhibitor Length = 382

Iteration: 1
 Score = 70.9 bits (172), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 195 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 252
Query: 181 TPSED 185
           TP+ +
Sbjct: 253 TPTRE 257

>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective Gsk-3 Inhibitors Length = 367

Iteration: 1
 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 191 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 248
Query: 181 TPSED 185
           TP+ +
Sbjct: 249 TPTRE 253

>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With Frattide Peptide Length = 378

Iteration: 1
 Score = 70.9 bits (172), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 202 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 259
Query: 181 TPSED 185
           TP+ +
Sbjct: 260 TPTRE 264

>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-3beta Inhibitors Length = 371

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 195 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 252
Query: 181 TPSED 185
           TP+ +
Sbjct: 253 TPTRE 257

>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis- (Indole)maleimide Pyridinophane Inhibitor Length = 352

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 183 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 181 TPSED 185
           TP+ +
Sbjct: 241 TPTRE 245

>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide And Inhibitor 7d Length = 350

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 183 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 181 TPSED 185
           TP+ +
Sbjct: 241 TPTRE 245

>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex Length = 349

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 183 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 181 TPSED 185
           TP+ +
Sbjct: 241 TPTRE 245

>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin Peptide Length = 350

Iteration: 1
 Score = 70.5 bits (171), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 183 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 240
Query: 181 TPSED 185
           TP+ +
Sbjct: 241 TPTRE 245

>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase 3beta In Complex With An Inhibitor Length = 350

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 184 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 241
Query: 181 TPSED 185
           TP+ +
Sbjct: 242 TPTRE 246

>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex Length = 353

Iteration: 1
 Score = 70.5 bits (171), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 31/65 (47%), Positives = 43/65 (66%), Gaps = 2/65 (3%)
Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y    APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 187 ICSRYYR--APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 244
Query: 181 TPSED 185
           TP+ +
Sbjct: 245 TPTRE 249

>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Adp Bound Length = 311

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G++ Y   +D+W++GCI  E++   P  PG +D DQL +IF  LGTP+   WP
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP 245

>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510 With Indirubin 3'-Monoxime Bound Length = 313

Iteration: 1
 Score = 69.7 bits (169), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           AP++L G++ Y   +D+W++GCI  E++   P  PG +D DQL +IF  LGTP+   WP
Sbjct: 187 APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP 245

>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum In Complex With Indirubin E804 Length = 383

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 29/62 (46%), Positives = 42/62 (67%), Gaps = 2/62 (3%)
Query: 126 CTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           C+R   APEL+ GA  Y   ID+W++GC+  EL+L  P   GE+ +DQL RI Q +GTP+
Sbjct: 203 CSRFYRAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMGTPT 262
Query: 184 ED 185
           ++
Sbjct: 263 KE 264

>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With Ind E804 Length = 324

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 37/58 (63%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           P++L G+  Y   IDMW VGCI  E+    P  PG +  +QL  IF+ LGTP+E+TWP
Sbjct: 169 PDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWP 226

>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex With An Indirubin Ligand Length = 429

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 184
           APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG PS+
Sbjct: 267 APEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320

>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41 Length = 417

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/55 (54%), Positives = 40/55 (72%), Gaps = 1/55 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 184
           APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG PS+
Sbjct: 267 APEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ 320

>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine Phosphorylation Regulated Kinase 2 (Dyrk2) Length = 429

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 29/55 (52%), Positives = 39/55 (70%), Gaps = 1/55 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 184
           APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG P +
Sbjct: 267 APEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPXQ 320

>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain Length = 331

Iteration: 1
 Score = 63.5 bits (153), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 25/52 (48%), Positives = 34/52 (65%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT 181
           APELL G   YG  +D+WA+GC++ E+ +  P  PG+SD+DQL  I   LG 
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGN 243

>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP
Sbjct: 179 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236

>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP
Sbjct: 179 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236

>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin Length = 306

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP
Sbjct: 179 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 236

>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3 Length = 308

Iteration: 1
 Score = 63.2 bits (152), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP
Sbjct: 187 APEVLLQS-TYATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244

>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol Length = 360

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94 Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75 Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum, Cgd2_1960 Length = 388

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 26/56 (46%), Positives = 36/56 (64%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE+L G+  Y  GIDMW++GCI+ E+L   P  PG S ++QL RI   +  PS +
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNE 253

>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57 Length = 360

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252

>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252

>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed With A Specific Inhibitor Of Human P38 Map Kinase Length = 380

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270

>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 197 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 252

>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 326

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ WP
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244

>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine Mutation At Position 52 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255

>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In Complex With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin 2-Yl]amino}phenyl)acetic Acid Length = 366

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 201 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 256

>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently Bound Length = 357

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 192 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 247

>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived From Mkp3 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With N,n-dimethyl-4-(4- Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide Length = 380

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270

>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX Length = 358

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 248

>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor Length = 307

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ WP
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244

>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Pyrazolopyridazine Derivative Length = 368

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 203 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 258

>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule Inhibitor Length = 368

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 195 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 250

>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral Cyclin Length = 308

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ WP
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244

>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2 Length = 365

Iteration: 1
 Score = 62.4 bits (150), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 200 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 255

>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase Erk1 Length = 382

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 215 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 270

>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2 Length = 364

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 25/56 (44%), Positives = 37/56 (66%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQE 254

>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC Length = 405

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 9/67 (13%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDL--------DQLTRIFQTLG 180
           APELL GAR Y   ID+WA+GCI  ELL   P F   + D+        DQL RIF  +G
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262
Query: 181 TPSEDTW 187
            P++  W
Sbjct: 263 FPADKDW 269

>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major Length = 360

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 26/67 (38%), Positives = 40/67 (59%), Gaps = 2/67 (2%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           ++C+ Y    APEL+FG + Y   +D+W+VGCI  E++L  P   G++   QL  I + L
Sbjct: 191 YICSRYYR--APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVL 248
Query: 180 GTPSEDT 186
           G PS + 
Sbjct: 249 GCPSREV 255

>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain Length = 311

Iteration: 1
 Score = 61.2 bits (147), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 27/51 (52%), Positives = 35/51 (68%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +PELL G   YG  +D+WA+GC+  ELL   P  PG+SD+DQL  I +TLG
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLG 220

>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e) Length = 358

Iteration: 1
 Score = 60.8 bits (146), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 36/56 (64%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+P ++
Sbjct: 193 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPEQE 248

>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase Length = 360

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
            A  Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NAMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif Mutants In Response To Inhibitor Binding Length = 360

Iteration: 1
 Score = 58.9 bits (141), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/107 (33%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +G G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A Dihydroquinazolinone Inhibitor Length = 370

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249

>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And Drb Length = 373

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + WP
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255

>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 11 (p38 Beta) In Complex With Nilotinib Length = 348

Iteration: 1
 Score = 58.2 bits (139), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 241

>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A Dihydroquinazolinone Length = 370

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL RI + +GTPS
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGKALFPGSDYIDQLKRIMEVVGTPS 249

>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb Length = 351

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + WP
Sbjct: 197 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254

>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A 2-amino-4- Heteroaryl-pyrimidine Inhibitor Length = 331

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + WP
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255

>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 Length = 331

Iteration: 1
 Score = 57.8 bits (138), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + WP
Sbjct: 198 PELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 255

>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain In Complex With A Monocyclic Pyrazolone Inhibitor Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38) Length = 360

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With Inhibitor Pg-874743 Length = 348

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 134 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIML 191
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238

>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s) Activating Mutant Form-A Length = 367

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRHVCT----LYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH          TR   APE++ 
Sbjct: 145 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIML 202
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249

>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a) Activating Mutant Length = 367

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRHVCT----LYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH          TR   APE++ 
Sbjct: 145 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIML 202
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249

>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l) Activating Mutant Length = 367

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 53/107 (49%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRHVCT----LYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH          TR   APE++ 
Sbjct: 145 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIML 202
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249

>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 56.6 bits (135), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine Length = 365

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 143 LKYIHSADIIH--RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML 200
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247

>pdb|2OZA|B Chain B, Structure Of P38alpha Complex Length = 366

Iteration: 1
 Score = 56.6 bits (135), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 144 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 201
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248

>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195 Length = 365

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 143 LKYIHSADIIH--RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML 200
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247

>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 Length = 329

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex Length = 366

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 144 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 201
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248

>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn Length = 330

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250

>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane Derivative Inhibitor (Cpa) Length = 331

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk Docking Peptide Length = 362

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 140 LKYIHSADIIH--RDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIML 197
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244

>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph 8.5 Length = 328

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 197 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 249

>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl Amide Inhibitor Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The Docking Site On Its Nuclear Substrate Mef2a Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D- Ribofuranosylbenzimidazole Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945 Length = 333

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea Length = 365

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 143 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 200
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247

>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A Dihydroquinolinone Length = 366

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 144 LKYIHSADIIH--RDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIML 201
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248

>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In Phosphorylated P38a And In Solution Length = 370

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 148 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 205
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 206 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 252

>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 359

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 137 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 194
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 195 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 241

>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase Length = 367

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 145 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 202
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 203 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 249

>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121 Length = 362

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 140 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 197
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244

>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In Complex With 4-[3-Methylsulfanylanilino]-6,7- Dimethoxyquinazoline Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme Length = 337

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small Molecule Inhibitor Length = 349

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 135 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 192
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239

>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map Kinase Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl Amide Inhibitor Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 149 LKYIHSADIIH--RDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIML 206
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253

>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human Protein Kinase Ck2 Catalytic Subunit Length = 334

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 250

>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715 Length = 362

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 140 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 197
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244

>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With Emodin At Ph 8.5 Length = 336

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase Ck2alpha With Altered Cosubstrate Specificity Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With The Catalytic Subunit Of Protein Kinase Ck2 Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme Length = 335

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3HEC|A Chain A, P38 In Complex With Imatinib Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 134 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 191
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238

>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P- Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl- Pyridin-3-Yl)naphthalen-1-Yl]urea Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 134 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 191
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238

>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With Inhibitor Pg-892579 Length = 348

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 134 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 191
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 192 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 238

>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE COMPLEX IN Solution Length = 359

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 143 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 200
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 201 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 247

>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex With Dp802 Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine Length = 351

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 135 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 192
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 193 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 239

>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376 Length = 354

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48 Length = 360

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Pyrrole-2- Carboxamide Inhibitor Length = 371

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 149 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 206
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 207 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 253

>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955 Length = 350

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 136 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 193
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 194 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 240

>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole Inhibitor Length = 372

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 150 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 207
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254

>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase Length = 362

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 140 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 197
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 198 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 244

>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195 Length = 372

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 150 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 207
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254

>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And Human Ck2alpha' In Complex With A Non-hydrolysable Atp-analogue Length = 349

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 199 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 251

>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499 Length = 372

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 150 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 207
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 208 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 254

>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A Dihydroquinazolinone Inhibitor Length = 366

Iteration: 1
 Score = 56.2 bits (134), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 144 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 201
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 202 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 248

>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha Length = 389

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/107 (31%), Positives = 55/107 (51%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 167 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 224
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y + +D+W+VGCI+ ELL      PG   ++QL +I +  GTP
Sbjct: 225 NWMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHINQLQQIMRLTGTP 271

>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995 Length = 379

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 157 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 214
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261

>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1- Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3- Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 158 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 215
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262

>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With Ellagic Acid Length = 340

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 33/53 (62%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT
Sbjct: 204 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGT 256

>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk Docking Partner Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 158 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 215
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262

>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655 Length = 379

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 157 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 214
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 215 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 261

>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor Length = 383

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 161 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIML 218
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265

>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3 Length = 353

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/71 (36%), Positives = 38/71 (53%), Gaps = 2/71 (2%)
Query: 116 GIGRHVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 175
           G+  +V T +    APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  I
Sbjct: 178 GMTEYVATRWYR--APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLI 235
Query: 176 FQTLGTPSEDT 186
           F  +GTP  D 
Sbjct: 236 FGIIGTPHSDN 246

>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based Inhibitor Length = 383

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 161 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMXGYVATRWYRAPEIML 218
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 265

>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase Length = 380

Iteration: 1
 Score = 55.8 bits (133), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 158 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDFGLARHTDDEMXGXVATRWYRAPEIML 215
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 262

>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7 Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D 
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246

>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182 Length = 353

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D 
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSDN 246

>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo Sapiens Length = 350

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  + PF  G+ + DQL RI + LGT
Sbjct: 200 GPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 252

>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein Kinase Ck2alpha Prime With A Potent Indazole-Derivative Inhibitor Length = 339

Iteration: 1
 Score = 55.5 bits (132), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   +MY   +DMW++GC++  ++  + PF  G+ + DQL RI + LGT
Sbjct: 205 GPELLVDYQMYDYSLDMWSLGCMLASMIFRREPFFHGQDNYDQLVRIAKVLGT 257

>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of Phe169 In Function And Structural Dynamics And Reveals A Novel Dfg-Out State Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580 Length = 360

Iteration: 1
 Score = 54.7 bits (130), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 35/107 (32%), Positives = 54/107 (50%), Gaps = 12/107 (11%)
Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRH----VCTLYCTR--GAPELLF 135
           L+Y+ +  I+   + LK S  A+ +    K +  G+ RH    +     TR   APE++ 
Sbjct: 138 LKYIHSADIIH--RDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIML 195
Query: 136 GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
               Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 196 NWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor Length = 398

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 28/126 (22%)
Query: 85  HLRYLENQQILEGLQALKSSM-------PALLK-------KFVGIGIGRHVCT------- 123
           H+RY    Q+L GL+ + S+        P+ L        K    G+ R +CT       
Sbjct: 159 HVRYF-LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 124 ----LYCTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 177
                  TR   APEL+     Y   ID+W+VGCI  E+L +    PG++ + QL  I  
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 277
Query: 178 TLGTPS 183
            LGTPS
Sbjct: 278 VLGTPS 283

>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex With An Mkk5 Binding Fragment Length = 442

Iteration: 1
 Score = 53.5 bits (127), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 41/126 (32%), Positives = 57/126 (45%), Gaps = 28/126 (22%)
Query: 85  HLRYLENQQILEGLQALKSSM-------PALLK-------KFVGIGIGRHVCT------- 123
           H+RY    Q+L GL+ + S+        P+ L        K    G+ R +CT       
Sbjct: 160 HVRYF-LYQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 124 ----LYCTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 177
                  TR   APEL+     Y   ID+W+VGCI  E+L +    PG++ + QL  I  
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMM 278
Query: 178 TLGTPS 183
            LGTPS
Sbjct: 279 VLGTPS 284

>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In Complex With P38 Map Kinase Length = 360

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP
Sbjct: 190 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTP 242

>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase Length = 353

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 111 KFVGIGIGRH----VCTLYCTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 164
           K +  G+ RH    +     TR   APE++     Y   +D+W+VGCI+ E+L       
Sbjct: 166 KILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 225
Query: 165 GESDLDQLTRIFQTLGTP 182
           G+  LDQLT+I +  G P
Sbjct: 226 GKDYLDQLTQILKVTGVP 243

>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796 Length = 364

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 111 KFVGIGIGRHVCTLY------CTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPF 162
           K +  G+ R  CT +       TR   APE++ G   Y   +D+W+VGCI+ EL+     
Sbjct: 166 KILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMG-YAANVDIWSVGCIMGELVKGCVI 224
Query: 163 LPGESDLDQLTRIFQTLGTPSED 185
             G   +DQ  ++ + LGTPS +
Sbjct: 225 FQGTDHIDQWNKVIEQLGTPSAE 247

>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma Length = 367

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 45/172 (26%), Positives = 74/172 (43%), Gaps = 33/172 (19%)
Query: 39  RRLDYANIIQYLSL--PVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQ---- 92
           + + + N+I  L +  P ETL   T     D+ +V  F  T   +   H +  E++    
Sbjct: 79  KHMRHENVIGLLDVFTPDETLDDFT-----DFYLVMPFMGTDLGKLMKHEKLGEDRIQFL 133
Query: 93  --QILEGLQALKSS-------MPALLK-------KFVGIGIGRHVCT----LYCTR--GA 130
             Q+L+GL+ + ++        P  L        K +  G+ R   +       TR   A
Sbjct: 134 VYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRA 193
Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           PE++     Y   +D+W+VGCI+ E++       G   LDQL  I +  GTP
Sbjct: 194 PEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTP 245

>pdb|4EXU|A Chain A, Mapk13, Inactive Form Length = 371

Iteration: 1
 Score = 52.8 bits (125), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/78 (34%), Positives = 40/78 (51%), Gaps = 6/78 (7%)
Query: 111 KFVGIGIGRH----VCTLYCTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 164
           K +  G+ RH    +     TR   APE++     Y   +D+W+VGCI+ E+L       
Sbjct: 184 KILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFK 243
Query: 165 GESDLDQLTRIFQTLGTP 182
           G+  LDQLT+I +  G P
Sbjct: 244 GKDYLDQLTQILKVTGVP 261

>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine- Phosphorylation-Regulated Kinase 1a Length = 382

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P
Sbjct: 226 SPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277

>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41 Length = 382

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P
Sbjct: 226 SPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 277

>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX Length = 368

Iteration: 1
 Score = 52.4 bits (124), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P
Sbjct: 207 SPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIP 258

>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 180 GTPS 183
           GTPS
Sbjct: 242 GTPS 245

>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 180 GTPS 183
           GTPS
Sbjct: 242 GTPS 245

>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 3/64 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 180 GTPS 183
           GTPS
Sbjct: 242 GTPS 245

>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245

>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 33/54 (61%), Gaps = 1/54 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTPS
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPS 245

>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein Kinase 6 (Mapk6) Length = 320

Iteration: 1
 Score = 49.7 bits (117), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 50/198 (25%), Positives = 78/198 (39%), Gaps = 46/198 (23%)
Query: 30  QAKAEGKQDRRLDYANIIQYLSLPVETLQPT---------TLSTSSDYIVVKIFTKTTKA 80
            A  E K  RRLD+ NI++      E L P+         +L+  +   +V+ + +T  A
Sbjct: 54  HALREIKIIRRLDHDNIVKVF----EILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLA 109
Query: 81  RFYSHLRYLENQ------QILEGLQALKSS-------MPA--------LLKKFVGIGIGR 119
                   LE        Q+L GL+ + S+        PA        L+ K    G+ R
Sbjct: 110 NVLEQGPLLEEHARLFMYQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLAR 169
Query: 120 HVCTLYCTRG------------APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES 167
            +   Y  +G            +P LL     Y   IDMWA GCI  E+L       G  
Sbjct: 170 IMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAH 229
Query: 168 DLDQLTRIFQTLGTPSED 185
           +L+Q+  I +++    E+
Sbjct: 230 ELEQMQLILESIPVVHEE 247

>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 386

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 195 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 246

>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By The Scaffolding Protein Jip1 And Sp600125 Length = 369

Iteration: 1
 Score = 49.7 bits (117), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin Antagonistically Control The Nuclear Shuttling Of Nfat4 Length = 371

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 245

>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A Natural Jnk1 Inhibitor Length = 379

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTP 244

>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737 Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 180 GTP 182
           GTP
Sbjct: 242 GTP 244

>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor, Sr- 3451 Length = 353

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774 Length = 355

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562 Length = 364

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 23/63 (36%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 241
Query: 180 GTP 182
           GTP
Sbjct: 242 GTP 244

>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors Length = 370

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor Length = 358

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 238

>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine Inhibitor Length = 369

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 198 APEVILGMG-YKENVDLWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 249

>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline Inhibitor Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With Mgamp-Pnp Length = 423

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282

>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With N-{3-Cyano-6-[3-(1- Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2, 3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole- Pyrimidine Inhibitor Length = 364

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245

>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious Tri-Substituted Thiophene Based Jnk Inhibitor Length = 363

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And Thiazole Based Inhibitors Of Jnk For The Treatment Of Neurodegenerative Diseases Length = 362

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 192 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 243

>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3- Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide Length = 365

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 245

>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VG I+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 180 GTPS 183
           GTPS
Sbjct: 242 GTPS 245

>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Length = 370

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 193 APEVILGMG-YKENVDIWSVGCIMGEMVCHKILFPGRDYIDQWNKVIEQLGTP 244

>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk Inhibitor For The Prevention Of Ischemia-Reperfusion Injury Length = 464

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 282

>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3 Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238

>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide Length = 356

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 187 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 238

>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex With The Inhibitor 4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68) Length = 331

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245

>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc Length = 332

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246

>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3 Length = 355

Iteration: 1
 Score = 48.9 bits (115), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP
Sbjct: 186 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTP 237

>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Luteolin Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245

>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map Kinase Jnk1 Length = 370

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 23/64 (35%), Positives = 36/64 (56%), Gaps = 3/64 (4%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G   Y   +D+W+VG I+ E++      PG   +DQ  ++ + L
Sbjct: 185 YVVTRYYR--APEVILGMG-YKENVDIWSVGVIMGEMIKGGVLFPGTDHIDQWNKVIEQL 241
Query: 180 GTPS 183
           GTPS
Sbjct: 242 GTPS 245

>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The Inhibitor Apigenin Length = 326

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245

>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor Length = 335

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 195 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 247

>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In Complex With The Inhibitor 3,4,5,6,7-Pentabromo-1h-Indazole (K64) Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245

>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex With Two Beta Peptides Mimicking The Architecture Of The Tetrameric Protein Kinase Ck2 Holoenzyme. Length = 332

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 194 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 246

>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro- AnthraquinoneCK2 KINASE COMPLEX Length = 325

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245

>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase Ck2 (Alpha-Subunit) And Mg-Amppnp Length = 327

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 193 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 245

>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine Derivatives As Potent Inhibitors Of Protein Kinase Ck2 Length = 352

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT 181
            PELL   + Y   +DMW++GC+   ++  K PF  G  + DQL +I + LGT
Sbjct: 214 GPELLVDLQDYDYSLDMWSLGCMFAGMIFRKEPFFYGHDNHDQLVKIAKVLGT 266

>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2 Length = 360

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 27/83 (32%), Positives = 43/83 (51%), Gaps = 9/83 (10%)
Query: 111 KFVGIGIGRHVCTLY------CTR--GAPELLFGARMYGVGIDMWAVGCIICELLLKAPF 162
           K +  G+ R   T +       TR   APE++ G   Y   +D+W+VGCI+ EL+  +  
Sbjct: 164 KILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMG-YKENVDIWSVGCIMGELVKGSVI 222
Query: 163 LPGESDLDQLTRIFQTLGTPSED 185
             G   +DQ  ++ + LGTPS +
Sbjct: 223 FQGTDHIDQWNKVIEQLGTPSAE 245

>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii, 25.M01780 Or Tgme49_007820 Length = 458

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 32/97 (32%), Positives = 40/97 (41%), Gaps = 33/97 (34%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGES- 167
           HV T +    APEL+     Y   ID+W++GCI  ELL            + P  PG S 
Sbjct: 243 HVVTRWYR--APELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSC 300
Query: 168 -------------------DLDQLTRIFQTLGTPSED 185
                              + DQL  IF  LGTPSE+
Sbjct: 301 FPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE 337

>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei, Pb000659.00.0 Length = 432

Iteration: 1
 Score = 47.0 bits (110), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 40/94 (42%), Gaps = 30/94 (31%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL-----------LKAPFLPG--- 165
           HV T +    APEL+     Y   ID+W+ GCI  ELL            + P  PG   
Sbjct: 211 HVVTRWYR--APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSC 268
Query: 166 --------------ESDLDQLTRIFQTLGTPSED 185
                         +S+ DQL  IF  +GTP+ED
Sbjct: 269 FPLSPDRNSKKVHEKSNRDQLNIIFNIIGTPTED 302

>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With Sb203580 Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APEL+   + +   +DMW+ GC++ E+  +     G +  +QL +I + +GTP
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253

>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs Resolution) Length = 362

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 31/53 (58%)
Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
           APEL+   + +   +DMW+ GC++ E+  +     G +  +QL +I + +GTP
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTP 253

>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147 Length = 429

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 31/94 (32%), Positives = 41/94 (43%), Gaps = 30/94 (31%)
Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL--LKA---------PFLPG--- 165
           HV T +    APEL+     Y   ID+W+ GCI  ELL  +K+         P  PG   
Sbjct: 216 HVVTRWYR--APELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPGSSC 273
Query: 166 --------------ESDLDQLTRIFQTLGTPSED 185
                         +S+ DQL  IF  +GTP E+
Sbjct: 274 FPLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEE 307

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	188
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	2e-35
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	7e-33
3niz_A	311	Rhodanese family protein; structural genomics, str	1e-32
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	2e-32
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	3e-32
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	3e-32
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	3e-32
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	6e-32
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	1e-31
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	6e-31
3o0g_A	292	Cell division protein kinase 5; kinase activator c	2e-30
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	2e-30
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	7e-30
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	2e-28
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	5e-28
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	7e-28
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	4e-26
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	2e-25
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	6e-23
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	2e-21
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	5e-21
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	8e-21
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	2e-20
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	2e-20
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	2e-20
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	2e-20
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	3e-20
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	1e-18
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	2e-18
3rp9_A	458	Mitogen-activated protein kinase; structural genom	5e-17
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	2e-15
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	2e-14
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	2e-14
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	7e-13
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	1e-12
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	3e-12
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	6e-10
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	7e-06
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	2e-05
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	4e-04
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	5e-04
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	7e-04

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7 Length = 346

 Score =  126 bits (318), Expect = 2e-35
 Identities = 53/69 (76%), Positives = 60/69 (86%), Gaps = 4/69 (5%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           V T  Y  R APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TL
Sbjct: 173 VVTRWY--R-APELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETL 229

Query: 180 GTPSEDTWP 188
           GTP+E+ WP
Sbjct: 230 GTPTEEQWP 238

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A Length = 288

 Score =  117 bits (296), Expect = 7e-33
 Identities = 33/69 (47%), Positives = 45/69 (65%), Gaps = 4/69 (5%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           + TL Y  R AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RIF+ L
Sbjct: 161 IVTLWY--R-APDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRIL 217

Query: 180 GTPSEDTWP 188
           GTP+   WP
Sbjct: 218 GTPNSKNWP 226

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} PDB: 2qkr_A* Length = 311

 Score =  118 bits (297), Expect = 1e-32
 Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 4/69 (5%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           V TL Y  R AP++L G++ Y   +D+W++GCI  E++   P  PG +D DQL +IF  L
Sbjct: 180 VVTLWY--R-APDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSIL 236

Query: 180 GTPSEDTWP 188
           GTP+   WP
Sbjct: 237 GTPNPREWP 245

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens} Length = 311

 Score =  116 bits (294), Expect = 3e-32
 Identities = 27/59 (45%), Positives = 35/59 (59%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           +PELL G   YG  +D+WA+GC+  ELL   P  PG+SD+DQL  I +TLG        
Sbjct: 170 SPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGDLIPRHQQ 228

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A* Length = 317

 Score =  116 bits (294), Expect = 3e-32
 Identities = 32/69 (46%), Positives = 44/69 (63%), Gaps = 4/69 (5%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           V TL Y  R AP++L G+R Y   ID+W+ GCI+ E++   P  PG +D +QL  IF  +
Sbjct: 169 VVTLWY--R-APDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIM 225

Query: 180 GTPSEDTWP 188
           GTP+E  WP
Sbjct: 226 GTPNESLWP 234

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens} Length = 324

 Score =  116 bits (294), Expect = 3e-32
 Identities = 33/69 (47%), Positives = 42/69 (60%), Gaps = 4/69 (5%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           V TL Y  R  P++L G+  Y   IDMW VGCI  E+    P  PG +  +QL  IF+ L
Sbjct: 161 VVTLWY--R-PPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRIL 217

Query: 180 GTPSEDTWP 188
           GTP+E+TWP
Sbjct: 218 GTPTEETWP 226

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A* Length = 329

 Score =  116 bits (293), Expect = 6e-32
 Identities = 32/69 (46%), Positives = 47/69 (68%), Gaps = 4/69 (5%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           + TL Y  R  PE+L G+R Y   +D+W++ CI  E+L+K P  PG+S++DQL +IF+ L
Sbjct: 198 IITLWY--R-PPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVL 254

Query: 180 GTPSEDTWP 188
           G P + TWP
Sbjct: 255 GLPDDTTWP 263

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} Length = 331

 Score =  115 bits (291), Expect = 1e-31
 Identities = 25/59 (42%), Positives = 34/59 (57%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APELL G   YG  +D+WA+GC++ E+ +  P  PG+SD+DQL  I   LG        
Sbjct: 192 APELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQE 250

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* Length = 351

 Score =  114 bits (287), Expect = 6e-31
 Identities = 24/59 (40%), Positives = 35/59 (59%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
            PELL G R YG  ID+W  GCI+ E+  ++P + G ++  QL  I Q  G+ + + WP
Sbjct: 196 PPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP 254

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A Length = 292

 Score =  111 bits (281), Expect = 2e-30
 Identities = 36/70 (51%), Positives = 44/70 (62%), Gaps = 5/70 (7%)

Query: 121 VCTL-YCTRGAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQT 178
           V TL Y  R  P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+ 
Sbjct: 162 VVTLWY--R-PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRL 218

Query: 179 LGTPSEDTWP 188
           LGTP+E+ WP
Sbjct: 219 LGTPTEEQWP 228

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens} Length = 308

 Score =  111 bits (281), Expect = 2e-30
 Identities = 27/59 (45%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +DMW+VGCI  E+  + P   G S+ DQL +IF  +G P ED WP
Sbjct: 187 APEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP 244

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B Length = 326

 Score =  110 bits (278), Expect = 7e-30
 Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I   +G P E+ WP
Sbjct: 187 APEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP 244

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis} Length = 394

 Score =  107 bits (270), Expect = 2e-28
 Identities = 32/68 (47%), Positives = 43/68 (63%), Gaps = 2/68 (2%)

Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y  R APEL+FGA  Y   ID+W+ GC++ EL+   P  PGES +DQL  I + LG
Sbjct: 202 ICSRY-YR-APELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLG 259

Query: 181 TPSEDTWP 188
           TPS +   
Sbjct: 260 TPSREQIK 267

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ... Length = 420

 Score =  107 bits (269), Expect = 5e-28
 Identities = 32/68 (47%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y  R APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LG
Sbjct: 217 ICSRY-YR-APELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLG 274

Query: 181 TPSEDTWP 188
           TP+ +   
Sbjct: 275 TPTREQIR 282

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens} Length = 405

 Score =  106 bits (267), Expect = 7e-28
 Identities = 29/68 (42%), Positives = 35/68 (51%), Gaps = 9/68 (13%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLG 180
           APELL GAR Y   ID+WA+GCI  ELL   P      +          DQL RIF  +G
Sbjct: 203 APELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMG 262

Query: 181 TPSEDTWP 188
            P++  W 
Sbjct: 263 FPADKDWE 270

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major} Length = 360

 Score =  101 bits (254), Expect = 4e-26
 Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 2/68 (2%)

Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ Y  R APEL+FG + Y   +D+W+VGCI  E++L  P   G++   QL  I + LG
Sbjct: 192 ICSRY-YR-APELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLG 249

Query: 181 TPSEDTWP 188
            PS +   
Sbjct: 250 CPSREVLR 257

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II} Length = 383

 Score = 99.8 bits (249), Expect = 2e-25
 Identities = 29/68 (42%), Positives = 44/68 (64%), Gaps = 2/68 (2%)

Query: 121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG 180
           +C+ +  R APEL+ GA  Y   ID+W++GC+  EL+L  P   GE+ +DQL RI Q +G
Sbjct: 202 ICSRF-YR-APELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRIIQIMG 259

Query: 181 TPSEDTWP 188
           TP+++   
Sbjct: 260 TPTKEQMI 267

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3mb7_A* 3mb6_A* 3owj_A* 3owk_A* ... Length = 330

 Score = 92.3 bits (230), Expect = 6e-23
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 1/60 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
            PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + LGT     + 
Sbjct: 198 GPELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLGTEDLYDYI 257

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II} Length = 388

 Score = 89.4 bits (222), Expect = 2e-21
 Identities = 26/57 (45%), Positives = 36/57 (63%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE+L G+  Y  GIDMW++GCI+ E+L   P  PG S ++QL RI   +  PS + 
Sbjct: 198 APEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPSNED 254

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens} Length = 320

 Score = 87.3 bits (217), Expect = 5e-21
 Identities = 19/57 (33%), Positives = 28/57 (49%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           +P LL     Y   IDMWA GCI  E+L       G  +L+Q+  I +++    E+ 
Sbjct: 192 SPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIPVVHEED 248

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} Length = 362

 Score = 87.0 bits (216), Expect = 8e-21
 Identities = 17/57 (29%), Positives = 32/57 (56%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APEL+   + +   +DMW+ GC++ E+  +     G +  +QL +I + +GTP  + 
Sbjct: 201 APELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFRGSTFYNQLNKIVEVVGTPKIED 257

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7 Length = 367

 Score = 86.2 bits (214), Expect = 2e-20
 Identities = 20/57 (35%), Positives = 30/57 (52%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++     Y   +D+W+VGCI+ E++       G   LDQL  I +  GTP  + 
Sbjct: 193 APEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPAEF 249

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A* Length = 353

 Score = 85.8 bits (213), Expect = 2e-20
 Identities = 23/56 (41%), Positives = 32/56 (57%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++  +  Y   +D+W+ GCI+ EL L+ P  PG     QL  IF  +GTP  D
Sbjct: 190 APEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPHSD 245

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ... Length = 367

 Score = 85.8 bits (213), Expect = 2e-20
 Identities = 22/57 (38%), Positives = 32/57 (56%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP  + 
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGAEL 253

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3o71_A 3r63_A 3c9w_A* 2y9q_A* 3sa0_A* 1wzy_A* 2e14_A* 1tvo_A* 2ojg_A* 2oji_A* ... Length = 364

 Score = 85.8 bits (213), Expect = 2e-20
 Identities = 25/57 (43%), Positives = 37/57 (64%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++ 
Sbjct: 199 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQED 255

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens} Length = 353

 Score = 85.4 bits (212), Expect = 3e-20
 Identities = 21/57 (36%), Positives = 32/57 (56%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++     Y   +D+W+VGCI+ E+L       G+  LDQLT+I +  G P  + 
Sbjct: 191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPGTEF 247

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A* Length = 464

 Score = 81.4 bits (201), Expect = 1e-18
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP  + 
Sbjct: 231 APEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEF 286

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ... Length = 371

 Score = 80.5 bits (199), Expect = 2e-18
 Identities = 20/57 (35%), Positives = 33/57 (57%), Gaps = 1/57 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDT 186
           APE++ G   Y   +D+W+VGCI+ E++      PG   +DQ  ++ + LGTP  + 
Sbjct: 194 APEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPEF 249

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii} Length = 458

 Score = 76.8 bits (189), Expect = 5e-17
 Identities = 37/141 (26%), Positives = 51/141 (36%), Gaps = 35/141 (24%)

Query: 80  ARFYSHLRYLENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTL-YCTRGAPELLFGAR 138
           AR   +     +Q  +   +   + +     K +   +  HV T  Y    APEL+    
Sbjct: 203 ARTVDYPENGNSQLPISPREDDMNLVTFPHTKNLKRQLTGHVVTRWYR---APELILLQE 259

Query: 139 MYGVGIDMWAVGCIICELLLKA-----------PFLPGES-------------------- 167
            Y   ID+W++GCI  ELL              P  PG S                    
Sbjct: 260 NYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRG 319

Query: 168 DLDQLTRIFQTLGTPSEDTWP 188
           + DQL  IF  LGTPSE+   
Sbjct: 320 NRDQLNVIFNILGTPSEEDIE 340

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A* Length = 432

 Score = 72.5 bits (178), Expect = 2e-15
 Identities = 28/85 (32%), Positives = 34/85 (40%), Gaps = 28/85 (32%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGESD---------- 168
           APEL+     Y   ID+W+ GCI  ELL            + P  PG S           
Sbjct: 219 APELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPLSPDRNSK 278

Query: 169 -------LDQLTRIFQTLGTPSEDT 186
                   DQL  IF  +GTP+ED 
Sbjct: 279 KVHEKSNRDQLNIIFNIIGTPTEDD 303

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* Length = 429

 Score = 69.8 bits (171), Expect = 2e-14
 Identities = 30/56 (53%), Positives = 40/56 (71%), Gaps = 1/56 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++ GAR YG+ IDMW++GCI+ ELL   P LPGE + DQL  + + LG PS+ 
Sbjct: 267 APEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQK 321

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A* Length = 382

 Score = 69.4 bits (170), Expect = 2e-14
 Identities = 21/56 (37%), Positives = 34/56 (60%), Gaps = 1/56 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           +PE+L G   Y + IDMW++GCI+ E+    P   G +++DQ+ +I + LG P   
Sbjct: 226 SPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPAH 280

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A* Length = 355

 Score = 64.7 bits (158), Expect = 7e-13
 Identities = 11/56 (19%), Positives = 22/56 (39%), Gaps = 1/56 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
            PE++     +    D+W++GCI+ E            + + L  + + LG     
Sbjct: 207 PPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPIPSH 261

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7} Length = 360

 Score = 63.9 bits (156), Expect = 1e-12
 Identities = 12/56 (21%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++     + V  DMW+ GC++ EL   +        ++ L  +   +    ++
Sbjct: 227 APEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMESIIQPIPKN 281

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A* Length = 339

 Score = 63.1 bits (154), Expect = 3e-12
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED 185
           APE++     +    D+W++GCI+ E  L     P     + L  + + LG   + 
Sbjct: 202 APEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPLPKH 256

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A Length = 373

 Score = 56.3 bits (136), Expect = 6e-10
 Identities = 21/74 (28%), Positives = 32/74 (43%), Gaps = 9/74 (12%)

Query: 117 IGRHVCTLYCTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------D 168
              H      TR   +PE+L GA  +G G D+W+  C+I EL+        +       D
Sbjct: 188 YDEHYTNSIQTREYRSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKD 246

Query: 169 LDQLTRIFQTLGTP 182
            D + +I + LG  
Sbjct: 247 DDHIAQIIELLGEL 260

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A* Length = 397

 Score = 44.5 bits (105), Expect = 7e-06
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 7/64 (10%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLP-----GESDLDQLTRIFQTLGTPS 183
           + E+L G+  Y    D+W+  C+  EL      F P        D D +  I + LG   
Sbjct: 261 SLEVLIGSG-YNTPADIWSTACMAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP 319

Query: 184 EDTW 187
               
Sbjct: 320 RKLI 323

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A Length = 303

 Score = 42.7 bits (101), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 26/59 (44%), Gaps = 2/59 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           A E+L G   Y   IDM+++G I  E++   PF  G   ++ L ++         D   
Sbjct: 198 ATEVLDGTGHYNEKIDMYSLGIIFFEMI--YPFSTGMERVNILKKLRSVSIEFPPDFDD 254

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A* Length = 371

 Score = 39.3 bits (91), Expect = 4e-04
 Identities = 10/61 (16%), Positives = 18/61 (29%), Gaps = 3/61 (4%)

Query: 130 APELLFG-ARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW 187
             E L      +   ++ W +G  I  +     PF      +    +    L  P  D+ 
Sbjct: 259 PREFLNASTATFTHALNAWQLGLSIYRVWCLFLPFGLVTPGIKGSWKRPS-LRVPGTDSL 317

Query: 188 P 188
            
Sbjct: 318 A 318

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A Length = 573

 Score = 39.0 bits (91), Expect = 5e-04
 Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 5/48 (10%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQLTRI 175
           APE+  G +  G   DMW+VG ++  +LL   +PF  GE+D + L  +
Sbjct: 324 APEVAEG-KPVGYYTDMWSVG-VLSYILLSGLSPFG-GENDDETLRNV 368

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} Length = 413

 Score = 38.5 bits (89), Expect = 7e-04
 Identities = 10/61 (16%), Positives = 20/61 (32%), Gaps = 6/61 (9%)

Query: 130 APELLFGAR----MYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE 184
           A  +L   +    +     D W +G  I  +     P    ++ L     IF++     +
Sbjct: 280 AERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPN-TDDAALGGSEWIFRSCKNIPQ 338

Query: 185 D 185
            
Sbjct: 339 P 339

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	188
4b9d_A	350	Serine/threonine-protein kinase NEK1; transferase,	100.0
4asz_A	299	BDNF/NT-3 growth factors receptor; transferase, TR	100.0
4fih_A	346	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4aw0_A	311	HPDK1, 3-phosphoinositide-dependent protein kinase	100.0
4gt4_A	308	Tyrosine-protein kinase transmembrane receptor RO;	100.0
4aoj_A	329	High affinity nerve growth factor receptor; transf	100.0
4fie_A	423	Serine/threonine-protein kinase PAK 4; kinase doma	100.0
4b99_A	398	Mitogen-activated protein kinase 7; transferase, i	100.0
3omv_A	307	RAF proto-oncogene serine/threonine-protein kinas;	100.0
3hyh_A	275	Carbon catabolite-derepressing protein kinase; kin	100.0
3fpq_A	290	Serine/threonine-protein kinase WNK1; protein seri	100.0
3ubd_A	304	Ribosomal protein S6 kinase alpha-3; kinase-inhibi	100.0
4g3f_A	336	NF-kappa-beta-inducing kinase; non-RD kinase, prot	100.0
3uto_A	573	Twitchin; kinase, muscle sarcomere, transferase; H	100.0
4ase_A	353	Vascular endothelial growth factor receptor 2; tra	100.0
4f9c_A	361	Cell division cycle 7-related protein kinase; Ser/	100.0
4g31_A	299	Eukaryotic translation initiation factor 2-alpha;	100.0
3v5w_A	689	G-protein coupled receptor kinase 2; inhibitor com	100.0
3hmm_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.97
3niz_A	311	Rhodanese family protein; structural genomics, str	99.97
3ttj_A	464	Mitogen-activated protein kinase 10; JNK3, protein	99.97
2pmi_A	317	Negative RE, cyclin-dependent protein kinase PHO85	99.97
3soa_A	444	Calcium/calmodulin-dependent protein kinase type a	99.97
2bdw_A	362	Hypothetical protein K11E8.1D; kinase, calmodulin	99.97
3oz6_A	388	Mitogen-activated protein kinase 1, serine/threon	99.97
3fe3_A	328	MAP/microtubule affinity-regulating kinase 3; seri	99.97
1ob3_A	288	PFPK5, cell division control protein 2 homolog; tr	99.97
2x4f_A	373	Myosin light chain kinase family member 4; LUNG, b	99.97
2yab_A	361	Death-associated protein kinase 2; apoptosis, tran	99.97
1o6l_A	337	RAC-beta serine/threonine protein kinase; protein	99.97
3zgw_A	347	Maternal embryonic leucine zipper kinase; transfer	99.97
3o0g_A	292	Cell division protein kinase 5; kinase activator c	99.97
3txo_A	353	PKC-L, NPKC-ETA, protein kinase C ETA type; phosph	99.97
3v8s_A	410	RHO-associated protein kinase 1; dimerization, myo	99.97
1fot_A	318	TPK1 delta, CAMP-dependent protein kinase type 1;	99.97
3mi9_A	351	Cell division protein kinase 9; P-TEFB, HIV-1, pro	99.97
3fxz_A	297	Serine/threonine-protein kinase PAK 1; transferase	99.97
1kob_A	387	Twitchin; kinase, intrasteric regulation; 2.30A {A	99.97
3mtl_A	324	Cell division protein kinase 16; pctaire1, indirub	99.97
1cm8_A	367	Phosphorylated MAP kinase P38-gamma; phosphorylati	99.97
3rp9_A	458	Mitogen-activated protein kinase; structural genom	99.96
1rdq_E	350	PKA C-alpha, CAMP-dependent protein kinase, alpha-	99.96
1tki_A	321	Titin; serine kinase, muscle, autoinhibition; 2.00	99.96
3gbz_A	329	Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-	99.96
3cbl_A	377	C-FES, proto-oncogene tyrosine-protein kinase FES/	99.96
1xjd_A	345	Protein kinase C, theta type; PKC-theta, ATP, AMP,	99.96
4aw2_A	437	Serine/threonine-protein kinase MRCK alpha; transf	99.96
1ua2_A	346	CAK, cell division protein kinase 7; cell cycle, p	99.96
3rgf_A	405	Cyclin-dependent kinase 8; protein kinase complex,	99.96
2y0a_A	326	Death-associated protein kinase 1; transferase, ca	99.96
2fst_X	367	Mitogen-activated protein kinase 14; active mutant	99.96
1j1b_A	420	Glycogen synthase kinase-3 beta; complex, TAU, AMP	99.96
3a62_A	327	Ribosomal protein S6 kinase beta-1; kinase domain,	99.96
2i0e_A	353	Protein kinase C-beta II; serine/threonine protein	99.96
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.96
2vd5_A	412	DMPK protein; serine/threonine-protein kinase, kin	99.96
3kul_A	325	Ephrin type-A receptor 8; ATP-binding, kinase, nuc	99.96
4dc2_A	396	Protein kinase C IOTA type; kinase, substrate, cel	99.96
3lij_A	494	Calcium/calmodulin dependent protein kinase with A	99.96
3s95_A	310	LIMK-1, LIM domain kinase 1; structural genomics,	99.96
4fr4_A	384	YANK1, serine/threonine-protein kinase 32A; struct	99.96
3g33_A	308	Cell division protein kinase 4; Ser/Thr protein ki	99.96
3l9p_A	367	Anaplastic lymphoma kinase; kinase domain, ATP-bin	99.96
3mwu_A	486	Calmodulin-domain protein kinase 1; serine/threoni	99.96
3c0i_A	351	Peripheral plasma membrane protein CASK; neurexin,	99.96
3p86_A	309	Serine/threonine-protein kinase CTR1; ETR1, ERS1,	99.96
2psq_A	370	Fibroblast growth factor receptor 2; kinase domain	99.96
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.96
2xrw_A	371	Mitogen-activated protein kinase 8; transcription,	99.96
3kn6_A	325	Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1	99.96
2r5t_A	373	Serine/threonine-protein kinase SGK1; AGC protein	99.96
4e7w_A	394	Glycogen synthase kinase 3; GSK3, PTyr195, transfe	99.96
2qol_A	373	Ephrin receptor; receptor tyrosine kinase, juxtame	99.96
3a8x_A	345	Protein kinase C IOTA type; transferase; HET: TPO;	99.96
3lb7_A	307	RAF proto-oncogene serine/threonine-protein kinas;	99.96
3n9x_A	432	Phosphotransferase; malaria kinase, structural gen	99.96
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.96
1luf_A	343	Muscle-specific tyrosine kinase receptor MUSK; pho	99.96
2c30_A	321	Serine/threonine-protein kinase PAK 6; CRIB domain	99.96
3uc3_A	361	Serine/threonine-protein kinase SRK2I; SNRK2, ABA	99.96
4eqm_A	294	Protein kinase; transferase; HET: ANP; 3.00A {Stap	99.96
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.96
3gni_B	389	Strad alpha; kinase fold, pseudokinase, alpha heli	99.96
2jam_A	304	Calcium/calmodulin-dependent protein kinase type 1	99.96
4hcu_A	269	Tyrosine-protein kinase ITK/TSK; transferase-trans	99.96
2ozo_A	613	Tyrosine-protein kinase ZAP-70; inactive ZAP-70, t	99.96
2y94_A	476	5'-AMP-activated protein kinase catalytic subunit;	99.96
3h4j_B	336	AMPK kdaid, SNF1-like protein kinase SSP2; ATP-bin	99.96
3pfq_A	674	PKC-B, PKC-beta, protein kinase C beta type; phosp	99.96
3nyv_A	484	Calmodulin-domain protein kinase 1; serine/threoni	99.96
4ejn_A	446	RAC-alpha serine/threonine-protein kinase; AKT1, a	99.96
3tki_A	323	Serine/threonine-protein kinase CHK1; cell checkpo	99.96
2r3i_A	299	Cell division protein kinase 2; serine/threonine-p	99.96
3eb0_A	383	Putative uncharacterized protein; kinase cryptospo	99.96
3f3z_A	277	Calcium/calmodulin-dependent protein kinase with d	99.96
3kk8_A	284	Calcium/calmodulin dependent protein kinase II; AT	99.96
4fl3_A	635	Tyrosine-protein kinase SYK; transferase; HET: ANP	99.96
3qyz_A	364	Mitogen-activated protein kinase 1; transferase, s	99.96
4euu_A	319	Serine/threonine-protein kinase TBK1; ATP binding,	99.96
1mp8_A	281	Focal adhesion kinase 1; tyrosine protein kinase,	99.96
4agu_A	311	Cyclin-dependent kinase-like 1; transferase, phosp	99.96
3q5i_A	504	Protein kinase; CDPK, malaria, phosphotransferase,	99.96
3hko_A	345	Calcium/calmodulin-dependent protein kinase with d	99.95
3c4z_A	543	Rhodopsin kinase; Ser/Thr kinase, RGS homology dom	99.95
2qkw_B	321	Protein kinase; three-helix bundle motif, AVRPTO-P	99.95
3ork_A	311	Serine/threonine protein kinase; structural genomi	99.95
4aaa_A	331	Cyclin-dependent kinase-like 2; transferase, phosp	99.95
2w4o_A	349	Calcium/calmodulin-dependent protein kinase type I	99.95
2acx_A	576	G protein-coupled receptor kinase 6; GRK, G transf	99.95
2ivs_A	314	Proto-oncogene tyrosine-protein kinase receptor RE	99.95
3gen_A	283	Tyrosine-protein kinase BTK; bruton'S tyrosine kin	99.95
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.95
2a2a_A	321	Death-associated protein kinase 2; autoinhibition,	99.95
2ac3_A	316	MAP kinase-interacting serine/threonine kinase 2;	99.95
3sxs_A	268	Cytoplasmic tyrosine-protein kinase BMX; transfera	99.95
2zv2_A	298	Calcium/calmodulin-dependent protein kinase kinas;	99.95
3tt0_A	382	Basic fibroblast growth factor receptor 1; kinase	99.95
3kfa_A	288	Tyrosine-protein kinase ABL1; CML, drug resistance	99.95
1u5q_A	348	Serine/threonine protein kinase TAO2; transferase;	99.95
2b9h_A	353	MAP kinase FUS3, mitogen-activated protein kinase	99.95
1mqb_A	333	Ephrin type-A receptor 2; tyrosine protein kinase,	99.95
3poz_A	327	Epidermal growth factor receptor; kinase domain, a	99.95
3is5_A	285	Calcium-dependent protein kinase; CDPK, structural	99.95
3ugc_A	295	Tyrosine-protein kinase JAK2; small molecule inhib	99.95
2qr7_A	342	Ribosomal protein S6 kinase alpha-3; kinase domain	99.95
4exu_A	371	Mitogen-activated protein kinase 13; P38 kinase, t	99.95
3llt_A	360	Serine/threonine kinase-1, pflammer; lammer kinase	99.95
3t9t_A	267	Tyrosine-protein kinase ITK/TSK; kinase domain, al	99.95
3cc6_A	281	Protein tyrosine kinase 2 beta; focal adhesion kin	99.95
1u59_A	287	Tyrosine-protein kinase ZAP-70; transferase; HET:	99.95
4fvq_A	289	Tyrosine-protein kinase JAK2; janus protein kinase	99.95
3uim_A	326	Brassinosteroid insensitive 1-associated receptor;	99.95
3qup_A	323	Tyrosine-protein kinase receptor TYRO3; protein ki	99.95
3pg1_A	362	Mitogen-activated protein kinase, putative (MAP K	99.95
3c1x_A	373	Hepatocyte growth factor receptor; receptor tyrosi	99.95
3kex_A	325	Receptor tyrosine-protein kinase ERBB-3; kinase do	99.95
2eue_A	275	Carbon catabolite derepressing protein kinase; kin	99.95
2i6l_A	320	Mitogen-activated protein kinase 6; MAPK6, ERK3, e	99.95
3eqc_A	360	Dual specificity mitogen-activated protein kinase;	99.95
3e7e_A	365	HBUB1, BUB1A, mitotic checkpoint serine/threonine-	99.95
3dls_A	335	PAS domain-containing serine/threonine-protein KI;	99.95
2w5a_A	279	Serine/threonine-protein kinase NEK2; Ser/Thr prot	99.95
3lm5_A	327	Serine/threonine-protein kinase 17B; STK17B, serin	99.95
3og7_A	289	AKAP9-BRAF fusion protein; proto-oncogene, V600E,	99.95
3nsz_A	330	CK II alpha, casein kinase II subunit alpha; inhib	99.95
3soc_A	322	Activin receptor type-2A; structural genomics cons	99.95
3dtc_A	271	Mitogen-activated protein kinase kinase kinase 9;	99.95
1qpc_A	279	LCK kinase; alpha beta fold, transferase; HET: PTR	99.95
3bhy_A	283	Death-associated protein kinase 3; death associate	99.95
3i6u_A	419	CDS1, serine/threonine-protein kinase CHK2; Ser/Th	99.95
1blx_A	326	Cyclin-dependent kinase 6; inhibitor protein, cycl	99.95
1p4o_A	322	Insulin-like growth factor I receptor protein; IGF	99.95
3a7i_A	303	MST3 kinase, serine/threonine kinase 24 (STE20 hom	99.95
2eva_A	307	TAK1 kinase - TAB1 chimera fusion protein; transfe	99.95
1nxk_A	400	MAP kinase-activated protein kinase 2; MK2, phosph	99.95
3f66_A	298	Hepatocyte growth factor receptor; C-Met, protein	99.95
3fdn_A	279	Serine/threonine-protein kinase 6; aurora kinase i	99.95
3kvw_A	429	DYRK2, dual specificity tyrosine-phosphorylation-r	99.95
3qd2_B	332	Eukaryotic translation initiation factor 2-alpha;	99.95
2yfx_A	327	Tyrosine-protein kinase receptor; nucleotide-bindi	99.95
2zmd_A	390	Dual specificity protein kinase TTK; MPS1, T686A,	99.95
3lzb_A	327	Epidermal growth factor receptor; epidermal growth	99.95
2j7t_A	302	Serine/threonine-protein kinase 10; transferase, A	99.95
4eut_A	396	Serine/threonine-protein kinase TBK1; ATP binding,	99.95
3coi_A	353	Mitogen-activated protein kinase 13; P38D, P38delt	99.95
3pls_A	298	Macrophage-stimulating protein receptor; protein k	99.95
4f0f_A	287	Serine/threonine-protein kinase ROCO4; LRRK2, ATP-	99.95
3kmu_A	271	ILK, integrin-linked kinase; cell adhesion, ANK re	99.95
3dbq_A	343	Dual specificity protein kinase TTK; MPS1 structur	99.95
3e3p_A	360	Protein kinase, putative glycogen synthase kinase;	99.95
3vhe_A	359	Vascular endothelial growth factor receptor 2; kin	99.95
2j0j_A	656	Focal adhesion kinase 1; cell migration, FERM, tra	99.95
2owb_A	335	Serine/threonine-protein kinase PLK1; catalytic do	99.95
2pvf_A	334	Fibroblast growth factor receptor 2; kinase domain	99.94
2yex_A	276	Serine/threonine-protein kinase CHK1; transferase,	99.94
1byg_A	278	CSK, protein (C-terminal SRC kinase); protein kina	99.94
3cok_A	278	Serine/threonine-protein kinase PLK4; POLO-like ki	99.94
2nru_A	307	Interleukin-1 receptor-associated kinase 4; inhibi	99.94
1xbb_A	291	Tyrosine-protein kinase SYK; gleevec, STI-571, ima	99.94
2rku_A	294	Serine/threonine-protein kinase PLK1; structure of	99.94
2vgo_A	284	Serine/threonine-protein kinase 12-A; nucleotide-b	99.94
1fvr_A	327	Tyrosine-protein kinase TIE-2; tyrosine kinase, tr	99.94
2izr_A	330	Casein kinase I isoform gamma-3; serine/threonine-	99.94
3lxl_A	327	Tyrosine-protein kinase JAK3; TYK2, inflammation,	99.94
2clq_A	295	Mitogen-activated protein kinase kinase kinase 5;	99.94
3brb_A	313	Proto-oncogene tyrosine-protein kinase MER; ATP-bi	99.94
3com_A	314	Serine/threonine-protein kinase 4; MST1, STE20-lik	99.94
1t4h_A	290	Serine/threonine-protein kinase WNK1; protein seri	99.94
2h6d_A	276	5'-AMP-activated protein kinase catalytic subunit	99.94
2wqm_A	310	Serine/threonine-protein kinase NEK7; ATP-binding,	99.94
2y7j_A	365	Phosphorylase B kinase gamma catalytic chain, test	99.94
2h34_A	309	Serine/threonine-protein kinase PKNE; apoenzyme, t	99.94
2wei_A	287	Calmodulin-domain protein kinase 1, putative; nucl	99.94
3q4u_A	301	Activin receptor type-1; structural genomics conso	99.94
1t46_A	313	HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcom	99.94
1phk_A	298	Phosphorylase kinase; glycogen metabolism, transfe	99.94
2i1m_A	333	Macrophage colony-stimulating factor 1 receptor; k	99.94
2ycf_A	322	Serine/threonine-protein kinase CHK2; transferase,	99.94
1x8b_A	289	WEE1HU, WEE1-like protein kinase; cell cycle, tran	99.94
1rjb_A	344	FL cytokine receptor; kinase, structure, autoinhib	99.94
2buj_A	317	Serine/threonine-protein kinase 16; transferase, A	99.94
3op5_A	364	Serine/threonine-protein kinase VRK1; adenosine tr	99.94
3lxp_A	318	Non-receptor tyrosine-protein kinase TYK2; JAK3, i	99.94
2v62_A	345	Serine/threonine-protein kinase VRK2; transferase,	99.94
3ll6_A	337	Cyclin G-associated kinase; transferase, protein k	99.94
3byv_A	377	Rhoptry kinase; malaria, transferase, structural g	99.94
3p1a_A	311	MYT1 kinase, membrane-associated tyrosine- and thr	99.94
1csn_A	298	Casein kinase-1; phosphotransferase; HET: ATP; 2.0	99.94
2vwi_A	303	Serine/threonine-protein kinase OSR1; STE kinase,	99.93
1vzo_A	355	Ribosomal protein S6 kinase alpha 5; protein kinas	99.93
2rio_A	434	Serine/threonine-protein kinase/endoribonuclease I	99.93
2y4i_B	319	KSR2, HKSR2, kinase suppressor of RAS 2; transfera	99.93
2wtk_C	305	Serine/threonine-protein kinase 11; transferase-me	99.93
3q60_A	371	ROP5B; pseudokinase, transferase; HET: ATP; 1.72A	99.93
1u46_A	291	ACK-1, activated CDC42 kinase 1; tyrosine kinase,	99.93
2xir_A	316	Vascular endothelial growth factor receptor 2; ang	99.93
2x7f_A	326	TRAF2 and NCK-interacting protein kinase; serine/t	99.93
1z57_A	339	Dual specificity protein kinase CLK1; protein tyro	99.93
1wak_A	397	Serine/threonine-protein kinase SPRK1; SRPK, trans	99.93
4hgt_A	296	Casein kinase I isoform delta; CK1D, inhibitor, tr	99.93
4e5w_A	302	Tyrosine-protein kinase JAK1; kinase domain, trans	99.93
3uzp_A	296	CKI-delta, CKID, casein kinase I isoform delta; CK	99.93
3an0_A	340	Dual specificity mitogen-activated protein kinase;	99.93
2vx3_A	382	Dual specificity tyrosine-phosphorylation- regula	99.93
2pml_X	348	PFPK7, Ser/Thr protein kinase; phosphorylati trans	99.93
2w1i_A	326	JAK2; chromosomal rearrangement, nucleotide-bindin	99.93
3qa8_A	676	MGC80376 protein; kinase ubiquitin-like domain, ph	99.93
3p23_A	432	Serine/threonine-protein kinase/endoribonuclease;	99.93
1zy4_A	303	Serine/threonine-protein kinase GCN2; translation	99.93
3g2f_A	336	Bone morphogenetic protein receptor type-2; kinase	99.93
2a19_B	284	Interferon-induced, double-stranded RNA-activated	99.93
3fme_A	290	Dual specificity mitogen-activated protein kinase;	99.93
3mdy_A	337	Bone morphogenetic protein receptor type-1B; compl	99.93
2eu9_A	355	Dual specificity protein kinase CLK3; kinase domai	99.93
3cek_A	313	Dual specificity protein kinase TTK; HMPS1, PYT, E	99.92
1q8y_A	373	SR protein kinase; transferase; HET: ADP ADE; 2.05	99.92
2jii_A	352	Serine/threonine-protein kinase VRK3 molecule: VA	99.92
2iwi_A	312	Serine/threonine-protein kinase PIM-2; nucleotide-	99.92
3aln_A	327	Dual specificity mitogen-activated protein kinase;	99.92
2pzi_A	681	Probable serine/threonine-protein kinase PKNG; ATP	99.92
2dyl_A	318	Dual specificity mitogen-activated protein kinase	99.92
1b6c_B	342	TGF-B superfamily receptor type I; complex (isomer	99.92
3sv0_A	483	Casein kinase I-like; typical kinase domain fold,	99.92
3a99_A	320	Proto-oncogene serine/threonine-protein kinase PI;	99.91
3fhr_A	336	MAP kinase-activated protein kinase 3; kinase-inhi	99.91
3gxj_A	303	TGF-beta receptor type-1; ALK5, kinase, inhibitor,	99.91
3m2w_A	299	MAP kinase-activated protein kinase 2; small molec	99.89
3uqc_A	286	Probable conserved transmembrane protein; structur	99.88
2vuw_A	336	Serine/threonine-protein kinase haspin; cell cycle	99.88
4azs_A	569	Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15	99.85
3dzo_A	413	Rhoptry kinase domain; parasitic disease, transfer	99.85
3en9_A	540	Glycoprotease, O-sialoglycoprotein endopeptidase/p	99.72
1zar_A	282	RIO2 kinase; serine kinase, winged-helix, RIO doma	99.32
1zth_A	258	RIO1 serine protein kinase; ribosome biogenesis, r	98.72
4gyi_A	397	RIO2 kinase; protein kinase, ADP complex, phosphoa	97.95
3tm0_A	263	Aminoglycoside 3'-phosphotransferase; protein kina	96.81
1nd4_A	264	Aminoglycoside 3'-phosphotransferase; protein kina	94.96
3dxp_A	359	Putative acyl-COA dehydrogenase; protein kinase-li	92.52
3d1u_A	288	Putative fructosamine-3-kinase; YP_290396.1, struc	92.39
4gkh_A	272	Aminoglycoside 3'-phosphotransferase APHA1-IAB; py	89.17
3tdw_A	306	Gentamicin resistance protein; kinase, phosphoryl	86.49
3r70_A	320	Aminoglycoside phosphotransferase; structural geno	82.55
3oja_A	487	Leucine-rich immune molecule 1; coiled-coil, helix	80.4

>4b9d_A Serine/threonine-protein kinase NEK1; transferase, inhibitor; HET: CK7; 1.90A {Homo sapiens} PDB: 4apc_A*

Probab=100.00  E-value=4.8e-40  Score=261.61  Aligned_cols=171  Identities=18%  Similarity=0.182  Sum_probs=140.8

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     +++..++|.+.+.  ..+..+.+.+|+++|++++|||||+++++|        .++...|+|||||.+|
T Consensus        37 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~--------~~~~~~yiVmEy~~gg  108 (350)
T 4b9d_A           37 FGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRESF--------EENGSLYIVMDYCEGG  108 (350)
T ss_dssp             --CEEEEEETTTCCEEEEEEEECTTSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTTC
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHCCHHHHHHHHHHHHHHHHCCCCCCCcEEEEE--------EECCEEEEEEeCCCCC
Confidence            789998     2344556655442  445567899999999999999999999986        4567899999999999


Q ss_pred             cHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          78 TKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        78 ~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|.++          +..++.++ +||+.||+|||+++       |+||       +||+|||+++           .+|
T Consensus       109 ~L~~~i~~~~~~~~~e~~~~~~~-~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~G  187 (350)
T 4b9d_A          109 DLFKRINAQKGVLFQEDQILDWF-VQICLALKHVHDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIG  187 (350)
T ss_dssp             BHHHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHHHTTCEETTCCGGGEEECTTCCEEECSTTEESCCCHHHHHHHHHHS
T ss_pred             cHHHHHHHcCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeccCCHHHEEECCCCCEEEcccccceeecCCcccccccCC
Confidence            99875          23566777 89999999999998       7777       5999999864           468


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      |+.|  +|||++.+.. |+.++|||||||++|||++|++||.+.+..+.+.+|...-.+|.+..+
T Consensus       188 T~~Y--mAPE~l~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~~~~~~~~~  249 (350)
T 4b9d_A          188 TPYY--LSPEICENKP-YNNKSDIWALGCVLYELCTLKHAFEAGSMKNLVLKIISGSFPPVSLHY  249 (350)
T ss_dssp             CCTT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTS
T ss_pred             Cccc--cCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCCCCCCCccC
Confidence            9999  9999998865 999999999999999999999999999999999999876655555444

>4asz_A BDNF/NT-3 growth factors receptor; transferase, TRKA, TRKB; 1.70A {Homo sapiens} PDB: 4at3_A* 4at4_A* 4at5_A* 3v5q_A*

Probab=100.00  E-value=1.6e-39  Score=254.36  Aligned_cols=172  Identities=17%  Similarity=0.211  Sum_probs=143.1

Q ss_pred             cccccc-c---------CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q---------SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~---------~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .         +..+++|.+++.+.+..+++.+|+++|++++|||||+++|+|        .++...++|||||
T Consensus        26 fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--------~~~~~~~lV~Ey~   97 (299)
T 4asz_A           26 FGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKFYGVC--------VEGDPLIMVFEYM   97 (299)
T ss_dssp             CCCEEEEEECSCC----CEEEEEEEECSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------CSSSSEEEEEECC
T ss_pred             CcEEEEEEECCcccCCCCEEEEEEEeCCCChHHHHHHHHHHHHHHhCCCCCCccEEEEE--------eeCCEEEEEEEcC
Confidence            789987 2         112345555555666678899999999999999999999987        4567889999999


Q ss_pred             ccccHHHHH---------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc
Q psy7174          75 TKTTKARFY---------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR  119 (188)
Q Consensus        75 ~~~~l~~~~---------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~  119 (188)
                      .+|+|..+.                     ..+..++ .|++.||.|||+++       |+||       +||+|||+++
T Consensus        98 ~~G~L~~~l~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qia~gl~yLH~~~iiHRDlKp~NILl~~~~~~Ki~DFGla~  176 (299)
T 4asz_A           98 KHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIA-QQIAAGMVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSR  176 (299)
T ss_dssp             TTCBHHHHHHHTSHHHHHC----CCCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCSCHH
T ss_pred             CCCcHHHHHHhcCcccccccccCCCCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCccCHhhEEECCCCcEEECCcccce
Confidence            999998864                     2345566 89999999999988       6777       5999999864


Q ss_pred             -------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         120 -------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       120 -------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                                   ..||..|  +|||++.+.. |+.++|||||||++|||++ |++||.+.++.+.+..|.+....+.|.
T Consensus       177 ~~~~~~~~~~~~~~~gt~~y--mAPE~~~~~~-~~~k~DVwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~  253 (299)
T 4asz_A          177 DVYSTDYYRVGGHTMLPIRW--MPPESIMYRK-FTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIECITQGRVLQRPR  253 (299)
T ss_dssp             HHTGGGCEEETTTEEECGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHHTCCCCCCT
T ss_pred             ecCCCCceeecCceecChhh--cCHHHHcCCC-CCchhhHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence                         2478889  9999998866 9999999999999999998 899999999999999998887777777


Q ss_pred             CCC
Q psy7174         186 TWP  188 (188)
Q Consensus       186 ~~p  188 (188)
                      .+|
T Consensus       254 ~~~  256 (299)
T 4asz_A          254 TCP  256 (299)
T ss_dssp             TCC
T ss_pred             cch
Confidence            765

>4fih_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP; 1.97A {Homo sapiens} PDB: 4fig_A* 4fif_A* 4fii_A* 4fij_A*

Probab=100.00  E-value=1.1e-39  Score=259.10  Aligned_cols=163  Identities=18%  Similarity=0.209  Sum_probs=137.6

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+.+...+..+.+.+|+++|++++|||||+++++|        .++...|+|||||.+|+|
T Consensus        87 fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~--------~~~~~~~ivmEy~~gg~L  158 (346)
T 4fih_A           87 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY--------LVGDELWVVMEFLEGGAL  158 (346)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEGGGCSSGGGGHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEECCCTTEEH
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCchhHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEeCCCCCcH
Confidence            899998 2    334445555444455567789999999999999999999986        456789999999999999


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       +..++.++ +||+.||+|||+++       |+||       +||+|||++.           .+||+.| 
T Consensus       159 ~~~l~~~~l~e~~~~~~~-~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~Y-  236 (346)
T 4fih_A          159 TDIVTHTRMNEEQIAAVC-LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW-  236 (346)
T ss_dssp             HHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGG-
T ss_pred             HHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccccCCHHHEEECCCCCEEEecCcCceecCCCCCcccccccCcCc-
Confidence            886       45677788 89999999999998       7777       5999999853           5689999 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                       +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+..|....
T Consensus       237 -mAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~  286 (346)
T 4fih_A          237 -MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNL  286 (346)
T ss_dssp             -CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSS
T ss_pred             -CCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcCC
Confidence             9999998765 9999999999999999999999999999988888876543

>4aw0_A HPDK1, 3-phosphoinositide-dependent protein kinase 1; transferase, allosteric regulation, allosteric site, phosphorylation, AGC protein kinase; HET: SEP ATP MJF; 1.43A {Homo sapiens} PDB: 3hrc_A* 3hrf_A* 4a06_A* 4a07_A* 3rcj_A* 4aw1_A* 3rwq_A* 3sc1_A* 3qd0_A* 2r7b_A* 3ion_A* 3qcq_A* 3qcs_A* 3qcx_A* 3qcy_A* 3iop_A* 3qd3_A* 3qd4_A* 3h9o_A* 1uu3_A* ...

Probab=100.00  E-value=1.1e-39  Score=255.72  Aligned_cols=163  Identities=18%  Similarity=0.206  Sum_probs=138.1

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+.+.   ..+..+.+.+|+++|++++|||||+++++|        .++...|+|||||.+
T Consensus        45 fg~V~~a~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~--------~~~~~~yivmEy~~g  116 (311)
T 4aw0_A           45 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--------QDDEKLYFGLSYAKN  116 (311)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEEHHHCCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EeCCEEEEEEecCCC
Confidence            788997     3444556666542   234457789999999999999999999986        556789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HV  121 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~  121 (188)
                      |+|..+        +..++.++ +||+.||+|||+++       |+||       +||+|||+++             .+
T Consensus       117 G~L~~~i~~~~~l~e~~~~~~~-~qi~~al~ylH~~~IiHRDlKPeNILl~~~g~vKl~DFGla~~~~~~~~~~~~~~~~  195 (311)
T 4aw0_A          117 GELLKYIRKIGSFDETCTRFYT-AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV  195 (311)
T ss_dssp             EEHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTTTCCCBCCCC
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCCccCCCCHHHeEEcCCCCEEEEEcCCceecCCCCCcccccCcc
Confidence            999886        45677788 89999999999998       7777       5999999854             46


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      ||+.|  +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+.+.+|.+.-
T Consensus       196 GTp~Y--mAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~~  250 (311)
T 4aw0_A          196 GTAQY--VSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEGLIFAKIIKLE  250 (311)
T ss_dssp             SCGGG--CCHHHHHHSC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             cCccc--CCHHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence            89999  9999998865 9999999999999999999999999999988888887653

>4gt4_A Tyrosine-protein kinase transmembrane receptor RO; ATP binding, phosphorylation, transferase; 2.41A {Homo sapiens} PDB: 3zzw_A

Probab=100.00  E-value=7.3e-39  Score=251.58  Aligned_cols=172  Identities=17%  Similarity=0.243  Sum_probs=141.0

Q ss_pred             ccccccc----------CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQQ----------SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~~----------~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+.          ++.+++|.++.. .....+++.+|++++++++|||||+++|+|        .++...++||||
T Consensus        39 fG~Vykg~~~~~~~~~~~~~VAvK~l~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~--------~~~~~~~lV~Ey  110 (308)
T 4gt4_A           39 FGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVVCLLGVV--------TKDQPLSMIFSY  110 (308)
T ss_dssp             SCEEEEEEEC-------CEEEEEEECCC-CCC-CHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEEC
T ss_pred             CcEEEEEEEcCCccCCCCeEEEEEEECcccChHHHHHHHHHHHHHHhCCCCCCCCcceEE--------EECCEEEEEEEc
Confidence            8899971          122344444432 334567899999999999999999999987        446678999999


Q ss_pred             cccccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecC
Q psy7174          74 FTKTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGI  115 (188)
Q Consensus        74 ~~~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~df  115 (188)
                      |.+|+|..+.                        ..+..++ .||+.||.|||+++       |+||       +||+||
T Consensus       111 ~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~~Ki~DF  189 (308)
T 4gt4_A          111 CSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLV-AQIAAGMEYLSSHHVVHKDLATRNVLVYDKLNVKISDL  189 (308)
T ss_dssp             CSSCBHHHHHHTTCSSCCCC-----CCEECCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCS
T ss_pred             CCCCcHHHHHHhhCccccccccccccccccCCCHHHHHHHH-HHHHHHHHHHHhCCCCCCCccccceEECCCCCEEECCc
Confidence            9999998864                        2345566 79999999999988       6677       599999


Q ss_pred             Cccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCC
Q psy7174         116 GIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       116 g~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      |+++             ..||..|  +|||++.+.. |+.++|||||||++|||++ |++||.+.++.+.+..|......
T Consensus       190 Glar~~~~~~~~~~~~~~~gt~~y--mAPE~l~~~~-~s~ksDVwSfGvvl~El~t~g~~Pf~~~~~~~~~~~i~~~~~~  266 (308)
T 4gt4_A          190 GLFREVYAADYYKLLGNSLLPIRW--MAPEAIMYGK-FSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQVL  266 (308)
T ss_dssp             CCBCGGGGGGCBCSSSSSCBCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTCCHHHHHHHHHTTCCC
T ss_pred             ccceeccCCCceeEecccccCCcc--cCHHHHhCCC-CCccchhhhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCC
Confidence            9864             3567889  9999998866 9999999999999999998 89999999999999999888888


Q ss_pred             CCCCCCC
Q psy7174         182 PSEDTWP  188 (188)
Q Consensus       182 p~~~~~p  188 (188)
                      |.|+.||
T Consensus       267 ~~p~~~~  273 (308)
T 4gt4_A          267 PCPDDCP  273 (308)
T ss_dssp             CCCTTCC
T ss_pred             CCcccch
Confidence            8888876

>4aoj_A High affinity nerve growth factor receptor; transferase, inhibitor; HET: V4Z; 2.75A {Homo sapiens}

Probab=100.00  E-value=8.8e-39  Score=253.19  Aligned_cols=172  Identities=15%  Similarity=0.195  Sum_probs=141.0

Q ss_pred             cccccc-c---------CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q---------SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~---------~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .         ++.+++|.+++.+.+..+++.+|+++|++++|||||+++|+|        .++...++|||||
T Consensus        54 fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~f~~E~~il~~l~HpnIV~l~g~~--------~~~~~~~lV~Ey~  125 (329)
T 4aoj_A           54 FGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRFFGVC--------TEGRPLLMVFEYM  125 (329)
T ss_dssp             SEEEEEEEESSSCC---CEEEEEEEESCCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------CSSSSEEEEEECC
T ss_pred             CcEEEEEEECCcccCCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEEcC
Confidence            788987 1         123445555555666778899999999999999999999987        4466789999999


Q ss_pred             ccccHHHHH-----------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc
Q psy7174          75 TKTTKARFY-----------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI  117 (188)
Q Consensus        75 ~~~~l~~~~-----------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~  117 (188)
                      .+|+|..+.                       ..+..++ .|++.||.|||+++       |+||       +||+|||+
T Consensus       126 ~~G~L~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qia~gl~yLH~~~iiHRDLKp~NILl~~~~~~Ki~DFGl  204 (329)
T 4aoj_A          126 RHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVA-SQVAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGM  204 (329)
T ss_dssp             TTCBHHHHHHTSSCC-----------CCSCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC-
T ss_pred             CCCcHHHHHHhcCcccccccccccccCCCCCHHHHHHHH-HHHHHHHHHHhcCCeecccccHhhEEECCCCcEEEccccc
Confidence            999998753                       2345566 79999999999988       6666       59999998


Q ss_pred             cc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         118 GR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       118 ~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      ++             ..||+.|  +|||++.+.. |+.++|||||||++|||++ |+.||.+.++.+.+..|.+....+.
T Consensus       205 a~~~~~~~~~~~~~~~~gt~~y--mAPE~~~~~~-~~~~sDvwS~Gvvl~Ellt~G~~Pf~~~~~~~~~~~i~~g~~~~~  281 (329)
T 4aoj_A          205 SRDIYSTDYYRVGGRTMLPIRW--MPPESILYRK-FTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAIDCITQGRELER  281 (329)
T ss_dssp             ---------------CCCCGGG--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSSCHHHHHHHHHHTCCCCC
T ss_pred             ceeccCCCcceecCcccccccc--cChhhhcCCC-CCccccccchHHHHHHHHcCCCCCCCCCCHHHHHHHHHcCCCCCC
Confidence            64             3478889  9999998866 9999999999999999998 8999999999999988888777777


Q ss_pred             CCCCC
Q psy7174         184 EDTWP  188 (188)
Q Consensus       184 ~~~~p  188 (188)
                      |..+|
T Consensus       282 p~~~~  286 (329)
T 4aoj_A          282 PRACP  286 (329)
T ss_dssp             CTTCC
T ss_pred             ccccc
Confidence            77665

>4fie_A Serine/threonine-protein kinase PAK 4; kinase domain, protein ATP binding, phosphorylation, transferase; HET: SEP ANP; 3.11A {Homo sapiens}

Probab=100.00  E-value=9.2e-39  Score=259.66  Aligned_cols=162  Identities=18%  Similarity=0.202  Sum_probs=137.7

Q ss_pred             cccccc-----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+     +++..++|.+........+.+.+|+++|++++|||||+++++|        .++...|+|||||.+|+|
T Consensus       164 fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIV~l~~~~--------~~~~~~~iVmEy~~gG~L  235 (423)
T 4fie_A          164 TGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY--------LVGDELWVVMEFLEGGAL  235 (423)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEESTTCSSGGGHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTTEEH
T ss_pred             CcEEEEEEECCCCCEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCCCceEEEE--------EECCEEEEEEeCCCCCcH
Confidence            889998     2344445555444455667899999999999999999999986        456789999999999999


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       +..++.++ +||+.||+|||+++       |+||       +||+|||++.           .+||+.| 
T Consensus       236 ~~~i~~~~l~e~~~~~~~-~qil~aL~ylH~~~IiHRDiKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~GTp~Y-  313 (423)
T 4fie_A          236 TDIVTHTRMNEEQIAAVC-LAVLQALSVLHAQGVIHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKSLVGTPYW-  313 (423)
T ss_dssp             HHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSTTTEEECTTCCEEECCCTTCEECCSSCCCBCCCEECTTT-
T ss_pred             HHHHhccCCCHHHHHHHH-HHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEecCccceECCCCCccccccccCcCc-
Confidence            886       45677788 89999999999998       7888       5999999853           5689999 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                       +|||++.+.. |+.++|||||||++|||++|++||.+.+..+.+..|...
T Consensus       314 -mAPEvl~~~~-y~~~~DiWSlGvilyeml~G~~PF~~~~~~~~~~~i~~~  362 (423)
T 4fie_A          314 -MAPELISRLP-YGPEVDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDN  362 (423)
T ss_dssp             -CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             -CCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHcC
Confidence             9999998765 999999999999999999999999999998888888654

>4b99_A Mitogen-activated protein kinase 7; transferase, inhibitor; HET: R4L; 2.80A {Homo sapiens}

Probab=100.00  E-value=5.8e-38  Score=254.21  Aligned_cols=177  Identities=28%  Similarity=0.407  Sum_probs=145.3

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     +++..++|.+++.  .....+++.+|+++|+.++|||||++++++...  ..+.+....|+|||||. |
T Consensus        67 fG~V~~a~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~~~~--~~~~~~~~~~ivmE~~~-g  143 (398)
T 4b99_A           67 YGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILKHFKHDNIIAIKDILRPT--VPYGEFKSVYVVLDLME-S  143 (398)
T ss_dssp             SCEEEEEEETTTCCEEEEEEETTTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS--SCTTTCCCEEEEEECCS-E
T ss_pred             CeEEEEEEECCCCCEEEEEEECccccchHHHHHHHHHHHHHHhcCCCCcceEeeeeecc--cccccCCEEEEEEeCCC-C
Confidence            788998     3344555555542  344567789999999999999999999986321  12345578899999996 4


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------c
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------H  120 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------~  120 (188)
                      +|..+        +..++.++ +||+.||.|||+++       |+||       +|++|||+++               .
T Consensus       144 ~L~~~i~~~~~l~~~~~~~~~-~qil~al~ylH~~~iiHRDlKP~NIl~~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~~  222 (398)
T 4b99_A          144 DLHQIIHSSQPLTLEHVRYFL-YQLLRGLKYMHSAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEY  222 (398)
T ss_dssp             EHHHHHTSSSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCC-------CCCCCSS
T ss_pred             CHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCcCcCCCcCccccccCCCCCEEEeecceeeecccCccccccccccc
Confidence            56554        46788888 89999999999998       7777       5999999863               4


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +||++|  +|||++.+...|+.++||||+||++|||++|++||.+.+..+++..|.+..+.|++..|
T Consensus       223 ~GT~~Y--~APEv~~~~~~~~~~~DiWSlG~il~ell~G~~pF~g~~~~~~l~~I~~~~g~p~~~~~  287 (398)
T 4b99_A          223 VATRWY--RAPELMLSLHEYTQAIDLWSVGCIFGEMLARRQLFPGKNYVHQLQLIMMVLGTPSPAVI  287 (398)
T ss_dssp             CCCCTT--CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCGGGT
T ss_pred             eeChHh--cCHHHhcCCCCCCChhheehhHHHHHHHHHCCCCCCCCCHHHHHHHHHHhcCCCChHHh
Confidence            789999  99999987666899999999999999999999999999999999999999998887655

>3omv_A RAF proto-oncogene serine/threonine-protein kinas; serine/threonine-protein kinase, transferase; HET: SM5; 4.00A {Homo sapiens}

Probab=100.00  E-value=1.6e-37  Score=243.55  Aligned_cols=166  Identities=13%  Similarity=0.132  Sum_probs=132.9

Q ss_pred             cccccc--cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ--QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+  ....+++|.++..  +.+..+.+.+|+++|++++|||||++++++         .+...++|||||.+|+|.
T Consensus        49 fG~Vy~~~~~~~vAvK~~~~~~~~~~~~~~f~~E~~il~~l~HpNIV~l~g~~---------~~~~~~iVmEy~~gGsL~  119 (307)
T 3omv_A           49 FGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGYM---------TKDNLAIVTQWCEGSSLY  119 (307)
T ss_dssp             SSEEEEEESSSEEEEEECCCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE---------CSSSCEEEEECCSSCBHH
T ss_pred             CcEEEEEEECCcEEEEEEEecCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE---------ECCeEEEEEEcCCCCCHH
Confidence            899998  3344557766653  445667899999999999999999999985         234689999999999998


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccc
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTL  124 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~  124 (188)
                      ++         ...+..++ .|++.||.|||+++       |+||       +||+|||+++             ..||+
T Consensus       120 ~~l~~~~~~l~~~~~~~i~-~qia~gL~yLH~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~~~GT~  198 (307)
T 3omv_A          120 KHLHVQETKFQMFQLIDIA-RQTAQGMDYLHAKNIIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSV  198 (307)
T ss_dssp             HHHHTSCCCCCHHHHHHHH-HHHHHHHHHHHHTTCBCSCCCSSSEEEETTEEEEECCCSSCBC------------CCCCT
T ss_pred             HHHhhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCccCCccCHHHEEECCCCcEEEeeccCceecccCCcceeecccccCC
Confidence            85         23456666 79999999999988       7787       4999999864             36899


Q ss_pred             cccCCCCcccccc--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh-hcCCC
Q psy7174         125 YCTRGAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ-TLGTP  182 (188)
Q Consensus       125 ~y~~~aPe~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~-~~~~p  182 (188)
                      .|  +|||++...  ..|+.++|||||||++|||++|++||.+.++...+..+.. ....|
T Consensus       199 ~y--mAPE~l~~~~~~~y~~ksDVwS~Gvvl~Elltg~~Pf~~~~~~~~~~~~~~~~~~~p  257 (307)
T 3omv_A          199 LW--MAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELPYSHINNRDQIIFMVGRGYASP  257 (307)
T ss_dssp             TS--CCHHHHHCCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHHTTCCCC
T ss_pred             Cc--cCHHHhhccCCCCCCcHHHhHhHHHHHHHHHHCCCCCCCCChHHHHHHHHhcCCCCC
Confidence            99  999998642  2389999999999999999999999998777666555543 44443

>3hyh_A Carbon catabolite-derepressing protein kinase; kinase domain, transferase, ATP-binding, carbohydrate metabo kinase, membrane; 2.20A {Saccharomyces cerevisiae} PDB: 3dae_A 2fh9_A 3mn3_A

Probab=100.00  E-value=2.1e-37  Score=239.46  Aligned_cols=162  Identities=18%  Similarity=0.180  Sum_probs=127.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+.+.   ..+..+.+.+|+++|++++|||||++++++        .++...|+||||| +
T Consensus        26 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~--------~~~~~~~ivmEy~-~   96 (275)
T 3hyh_A           26 FGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYDVI--------KSKDEIIMVIEYA-G   96 (275)
T ss_dssp             -CCEEEEECTTTCCEEEEEEEECC------CHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEECC-C
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHcCCHHHHHHHHHHHHHHHHCCCCCCCeEEEEE--------EECCEEEEEEeCC-C
Confidence            788998     2344456655542   233456789999999999999999999986        4567889999999 5


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      |++.+.        +..++.++ +|++.||+|||+++       |+||       +||+|||+++          .+||+
T Consensus        97 g~L~~~l~~~~~l~e~~~~~~~-~qi~~al~ylH~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~~GT~  175 (275)
T 3hyh_A           97 NELFDYIVQRDKMSEQEARRFF-QQIISAVEYCHRHKIVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSP  175 (275)
T ss_dssp             EEHHHHHHHSCSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCTTTEEECTTCCEEECCSSCC---------------C
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccccCChHHeEECCCCCEEEeecCCCeecCCCCccCCeeECc
Confidence            666654        45677788 89999999999998       8888       5999999864          57899


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .|  +|||++.+...++.++||||+||++|+|++|++||.+.+....+.+|...
T Consensus       176 ~Y--~APE~~~~~~y~~~~~DiwSlGvily~lltg~~PF~~~~~~~~~~~i~~~  227 (275)
T 3hyh_A          176 NY--AAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLPFDDESIPVLFKNISNG  227 (275)
T ss_dssp             TT--SCHHHHSSSSCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHT
T ss_pred             cc--CChhhhcCCCCCCChhhhHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcC
Confidence            99  99999988664468999999999999999999999998888877777654

>3fpq_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase, ATP-BIND kinase, nucleotide-binding, phosphoprotein; 1.80A {Rattus norvegicus}

Probab=100.00  E-value=1.6e-37  Score=241.80  Aligned_cols=162  Identities=19%  Similarity=0.191  Sum_probs=126.5

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|+++|++++|||||+++++|...    ...+...++|||||.+|
T Consensus        39 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~----~~~~~~~~lvmEy~~gg  114 (290)
T 3fpq_A           39 FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST----VKGKKCIVLVTELMTSG  114 (290)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE----ETTEEEEEEEEECCCSC
T ss_pred             CcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEeec----cCCCcEEEEEEeCCCCC
Confidence            789998 2    223334444332  344567899999999999999999999986321    12245679999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC---------CCCe--------EEEecCCccc---------cccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM---------PALL--------KKFVGIGIGR---------HVCT  123 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~---------~~~i--------lkl~dfg~~~---------~~~~  123 (188)
                      +|..+        +..++.++ +||+.||.|||+++         |+||        +||+|||+++         .+||
T Consensus       115 ~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~ylH~~~~~IiHRDlKp~NILl~~~~g~vKl~DFGla~~~~~~~~~~~~GT  193 (290)
T 3fpq_A          115 TLKTYLKRFKVMKIKVLRSWC-RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGT  193 (290)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHTSSSCCCCCCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSS
T ss_pred             CHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCCEEecccChhheeEECCCCCEEEEeCcCCEeCCCCccCCcccC
Confidence            99886        34566777 89999999999875         5565        5999999864         5689


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                      +.|  +|||++.+ + |+.++|||||||++|||++|++||.+.++...+.+.
T Consensus       194 p~Y--mAPE~~~~-~-y~~~~DiwSlGvilyelltg~~Pf~~~~~~~~~~~~  241 (290)
T 3fpq_A          194 PEF--MAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRR  241 (290)
T ss_dssp             CCC--CCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHHHHH
T ss_pred             ccc--cCHHHcCC-C-CCcHHHHHHHHHHHHHHHHCCCCCCCCCcHHHHHHH
Confidence            999  99999865 4 999999999999999999999999876655444333

>3ubd_A Ribosomal protein S6 kinase alpha-3; kinase-inhibitor complex, induced FIT, transferase-transfera inhibitor complex; HET: SL0; 1.53A {Mus musculus} PDB: 4el9_A* 3g51_A* 2z7q_A* 2z7r_A* 2z7s_A*

Probab=100.00  E-value=1.6e-38  Score=248.78  Aligned_cols=163  Identities=15%  Similarity=0.203  Sum_probs=130.6

Q ss_pred             cccccc-c-------CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q-------SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~-------~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .       ++..++|.+++.  ......++.+|+++|++++|||||+++++|        .++...|++||||
T Consensus        37 fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~--------~~~~~~~ivmEy~  108 (304)
T 3ubd_A           37 FGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKLHYAF--------QTEGKLYLILDFL  108 (304)
T ss_dssp             GCEEEEEEECSSTTTTCEEEEEEEESEEEEEEECC------CCCCCCCCTTEECEEEEE--------EETTEEEEEECCC
T ss_pred             CeEEEEEEEccCCCCCEEEEEEEEehHHcChHHHHHHHHHHHHHHHCCCCCCCeEEEEE--------EECCEEEEEEEcC
Confidence            788886 1       123445555543  334456788999999999999999999986        4567899999999


Q ss_pred             ccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cc
Q psy7174          75 TKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        75 ~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~  121 (188)
                      .+|+|..+        +..++.++ +|++.||+|||+++       |+||       +||+|||+++           .+
T Consensus       109 ~gg~L~~~l~~~~~l~e~~~~~~~-~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~vKl~DFGla~~~~~~~~~~~~~~  187 (304)
T 3ubd_A          109 RGGDLFTRLSKEVMFTEEDVKFYL-AELALALDHLHSLGIIYRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFC  187 (304)
T ss_dssp             TTCEEHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSSCCGGGEEECTTSCEEEESSEEEEC-----CCCCSCC
T ss_pred             CCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCcCCCCCHHHeEEcCCCCEEecccccceeccCCCccccccc
Confidence            99999875        45677788 89999999999998       7777       5999999854           46


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      ||+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+.+|.+..
T Consensus       188 GT~~Y--mAPE~~~~~~-y~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~~  242 (304)
T 3ubd_A          188 GTVEY--MAPEVVNRRG-HTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTMILKAK  242 (304)
T ss_dssp             CCGGG--CCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             cCccc--CCHHHhccCC-CCCCCcccchHHHHHHHHhCCCCCCCcCHHHHHHHHHcCC
Confidence            89999  9999998865 9999999999999999999999999999999888887653

>4g3f_A NF-kappa-beta-inducing kinase; non-RD kinase, protein serine/threonine kinase, S based drug design, MAP3K14, transferase; HET: 0WB; 1.64A {Mus musculus} PDB: 4g3g_A* 4g3c_A 4dn5_A*

Probab=100.00  E-value=1.8e-37  Score=245.75  Aligned_cols=160  Identities=14%  Similarity=0.131  Sum_probs=129.0

Q ss_pred             cccccc-cCCccc-cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+ .++... .+|+|....+  ....+|+++|++++|||||+++++|        .++...|+|||||.+|+|..+
T Consensus        71 fG~Vy~a~~~~~g~~vAiK~i~~~--~~~~~E~~il~~l~HpnIV~l~~~~--------~~~~~~~ivmEy~~gg~L~~~  140 (336)
T 4g3f_A           71 FGEVHRMKDKQTGFQCAVKKVRLE--VFRVEELVACAGLSSPRIVPLYGAV--------REGPWVNIFMELLEGGSLGQL  140 (336)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETT--TCCTHHHHTTTTCCCTTBCCEEEEE--------EETTEEEEEECCCTTCBHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEECHH--HhHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEeccCCCcHHHH
Confidence            789998 333222 4445543222  2235799999999999999999986        456788999999999999886


Q ss_pred             --------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------------cccc
Q psy7174          83 --------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------------HVCT  123 (188)
Q Consensus        83 --------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------------~~~~  123 (188)
                              +..+..++ .|++.||+|||+++       |+||        +||+|||+++                .+||
T Consensus       141 l~~~~~l~e~~~~~~~-~qi~~aL~ylH~~~IiHRDlKp~NILl~~~g~~vKl~DFGla~~~~~~~~~~~~~~~~~~~GT  219 (336)
T 4g3f_A          141 IKQMGCLPEDRALYYL-GQALEGLEYLHTRRILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGT  219 (336)
T ss_dssp             HHHHSSCCHHHHHHHH-HHHHHHHHHHHTTTEECSCCCGGGEEECTTSCCEEECCCTTCEEC------------CCCCCC
T ss_pred             HHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCceecccCHHHEEEeCCCCEEEEeeCCCCeEccCCCcccceecCCccccC
Confidence                    34577777 89999999999998       6666        5999999864                2589


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+.+|...
T Consensus       220 ~~Y--mAPE~~~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~  271 (336)
T 4g3f_A          220 ETH--MAPEVVMGKP-CDAKVDIWSSCCMMLHMLNGCHPWTQYFRGPLCLKIASE  271 (336)
T ss_dssp             GGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSTTTCCSCCHHHHHHS
T ss_pred             ccc--cCHHHHCCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHcC
Confidence            999  9999998865 999999999999999999999999988776666666553

>3uto_A Twitchin; kinase, muscle sarcomere, transferase; HET: FLC P33; 2.40A {Caenorhabditis elegans} PDB: 1koa_A

Probab=100.00  E-value=1.1e-35  Score=250.87  Aligned_cols=169  Identities=15%  Similarity=0.118  Sum_probs=140.7

Q ss_pred             cccccc-----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+     +++..++|.+.+......+.+.+|+++|+.++|||||+++++|        .++...+++||||.+|+|
T Consensus       170 fg~V~~~~~~~tg~~~AiK~i~~~~~~~~~~~~~Ei~il~~l~hpnIv~l~~~~--------~~~~~~~iv~E~~~gg~L  241 (573)
T 3uto_A          170 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF--------EDDNEMVMIYEFMSGGEL  241 (573)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE--------ECSSEEEEEEECCCCCBH
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccchhhHHHHHHHHHHHHhCCCCCCCeEEEEE--------EECCEEEEEEeecCCCcH
Confidence            788887     3344455555544455567889999999999999999999986        557789999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ..+         +..++.++ +||+.||.|||+++       |+||         +||+|||++.          .+||+
T Consensus       242 ~~~i~~~~~~l~e~~~~~~~-~qi~~al~ylH~~~iiHRDlKp~Nill~~~~~~~vKl~DFG~a~~~~~~~~~~~~~GT~  320 (573)
T 3uto_A          242 FEKVADEHNKMSEDEAVEYM-RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA  320 (573)
T ss_dssp             HHHHTCTTSCEEHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCSSCEECCTTSEEEEECSSG
T ss_pred             HHHHHHhCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeccCChhhccccCCCCCCEEEeeccceeEccCCCceeeeEECc
Confidence            764         45677888 89999999999998       5555         5999999864          46899


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+.+|...-..+++.
T Consensus       321 ~y--~APEv~~~~~-y~~~~DiWSlGvilyeml~G~~Pf~~~~~~~~~~~i~~~~~~~~~~  378 (573)
T 3uto_A          321 EF--AAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDS  378 (573)
T ss_dssp             GG--CCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTTCCCCCSG
T ss_pred             cc--cCHHHhCCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHhCCCCCCcc
Confidence            99  9999998866 9999999999999999999999999999999999887765444443

>4ase_A Vascular endothelial growth factor receptor 2; transferase, angiogenesis, signaling protein, phosphorylatio receptor, inhibitor; HET: AV9; 1.83A {Homo sapiens} PDB: 4agd_A* 4asd_A* 4agc_A*

Probab=100.00  E-value=3.1e-35  Score=234.73  Aligned_cols=173  Identities=17%  Similarity=0.210  Sum_probs=132.1

Q ss_pred             cccccc-c----CCccc--cccccc---c-chhhhhHHHHHHHHHHhCCC-CCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-Q----SKWSP--NTPMAR---C-DVNVETQAKAEGKQDRRLDY-ANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~----~~~~~--~~~i~~---~-~~~~~~~~~~E~~il~~l~h-~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+ .    ++..+  .+|+|.   . .....+.+.+|+++|++++| ||||+++|+|.+       .+...++|||
T Consensus        77 fG~Vy~a~~~~~~~~~~~k~VAvK~l~~~~~~~~~~~~~~E~~il~~l~hhpnIV~l~g~~~~-------~~~~~~iV~E  149 (353)
T 4ase_A           77 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACTK-------PGGPLMVIVE  149 (353)
T ss_dssp             SEEEEEEEEETSSSTTCEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEECC-------TTSCCEEEEE
T ss_pred             CeEEEEEEEcCCCcccCCeEEEEEEEccccChHHHHHHHHHHHHHHHcCCCCcEEEEEEEEEe-------cCCEEEEEEE
Confidence            788987 1    11111  344443   2 33455678999999999975 999999998622       2456899999


Q ss_pred             ccccccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEec
Q psy7174          73 IFTKTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVG  114 (188)
Q Consensus        73 ~~~~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~d  114 (188)
                      ||.+|+|..+.                        ..+..++ .||+.||.|||+++       |+||       +||+|
T Consensus       150 y~~~G~L~~~L~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qia~gl~yLH~~~iiHRDLK~~NILl~~~~~vKi~D  228 (353)
T 4ase_A          150 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS-FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD  228 (353)
T ss_dssp             CCTTEEHHHHHHHTGGGBCCC-------CTTCBCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECC
T ss_pred             cCCCCCHHHHHHhcccccccccccchhhccccCCHHHHHHHH-HHHHHHHHhHhhCCeecCccCccceeeCCCCCEEECc
Confidence            99999998864                        2345566 79999999999998       6676       59999


Q ss_pred             CCccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHH-HHHHHHhhc
Q psy7174         115 IGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLD-QLTRIFQTL  179 (188)
Q Consensus       115 fg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~-~~~~i~~~~  179 (188)
                      ||+++             ..||..|  +|||++.+.. |+.++|||||||++|||++ |++||.+.+..+ ....+.+..
T Consensus       229 FGlar~~~~~~~~~~~~~~~gt~~y--mAPE~l~~~~-y~~ksDVwS~Gv~l~El~t~G~~Pf~~~~~~~~~~~~i~~g~  305 (353)
T 4ase_A          229 FGLARDIYKDPDYVRKGDARLPLKW--MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT  305 (353)
T ss_dssp             CGGGSCTTTCTTSEEETTEEECGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHHTC
T ss_pred             chhhhhcccCCCceeeccccccccc--cCHHHHhcCC-CCCcccEeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHHcCC
Confidence            99865             3467789  9999998865 9999999999999999998 999999876544 444555566


Q ss_pred             CCCCCCCCC
Q psy7174         180 GTPSEDTWP  188 (188)
Q Consensus       180 ~~p~~~~~p  188 (188)
                      +.+.|+.+|
T Consensus       306 ~~~~p~~~~  314 (353)
T 4ase_A          306 RMRAPDYTT  314 (353)
T ss_dssp             CCCCCTTCC
T ss_pred             CCCCCccCC
Confidence            666666654

>4f9c_A Cell division cycle 7-related protein kinase; Ser/Thr protein kinase, transferase, phosphorylation, cell C cell division, mitosis, S phase; HET: 0SX; 2.08A {Homo sapiens} PDB: 4f99_A* 4f9b_A* 4f9a_A*

Probab=100.00  E-value=6.7e-35  Score=233.67  Aligned_cols=166  Identities=16%  Similarity=0.183  Sum_probs=135.0

Q ss_pred             cccccc-cCC----cccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QSK----WSPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~~----~~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .++    ....+|+|+. ......++.+|+++|+.+ +||||++++++|        .++...++||||+.+|
T Consensus        34 fg~Vy~a~~~~~~~~~~~vAiK~i~~~~~~~~~~~E~~~l~~~~~h~nIv~l~~~~--------~~~~~~~lvmE~~~g~  105 (361)
T 4f9c_A           34 FSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIAAELQCLTVAGGQDNVMGVKYCF--------RKNDHVVIAMPYLEHE  105 (361)
T ss_dssp             SEEEEEEEEEBTTSCEEEEEEEEECTTSCHHHHHHHHHHHHHTCSBTTBCCCSEEE--------EETTEEEEEEECCCCC
T ss_pred             CcEEEEEEEcccCCCCCEEEEEEEccccCHHHHHHHHHHHHHhcCCCCCceEEEEE--------EECCEEEEEEeCCCcc
Confidence            788887 322    1124556553 233456788999999998 599999999986        4467899999999999


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc------------------
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR------------------  119 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~------------------  119 (188)
                      +|..+     +..++.++ +|++.||+|||+++       |+||        +||+|||+++                  
T Consensus       106 ~L~~~~~~l~~~~~~~~~-~qll~al~ylH~~gIiHRDiKPeNiLl~~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~~~  184 (361)
T 4f9c_A          106 SFLDILNSLSFQEVREYM-LNLFKALKRIHQFGIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLKFVQSEAQ  184 (361)
T ss_dssp             CHHHHHTTCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECTTCSCGGGGGC-----
T ss_pred             cHHHHHcCCCHHHHHHHH-HHHHHHHHHHHHCCeEeCcCCHHHeEEeCCCCeEEECcCCCCcccCCcccccccccccccc
Confidence            99886     46788888 89999999999999       7777        5999999863                  


Q ss_pred             ---------------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHh
Q psy7174         120 ---------------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL-PGESDLDQLTRIFQ  177 (188)
Q Consensus       120 ---------------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf-~~~~~~~~~~~i~~  177 (188)
                                           .+||++|  +|||++.+.+.|+.++||||+||++|||++|++|| .+.++.+++.+|..
T Consensus       185 ~~~~~~~~~~~~~~~~~~~~~~~GT~~Y--~APE~l~~~~~y~~~~DiWSlG~il~ell~G~~Pf~~~~~~~~~l~~I~~  262 (361)
T 4f9c_A          185 QERCSQNKCSICLSRRQQVAPRAGTPGF--RAPEVLTKCPNQTTAIDMWSAGVIFLSLLSGRYPFYKASDDLTALAQIMT  262 (361)
T ss_dssp             ---------------------CCCCGGG--CCHHHHTTCSCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccCccc--cCHHHHcCCCCCCCccchhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHH
Confidence                                 2589999  99999987666999999999999999999999888 45677888888887


Q ss_pred             hcCC
Q psy7174         178 TLGT  181 (188)
Q Consensus       178 ~~~~  181 (188)
                      ..+.
T Consensus       263 ~~G~  266 (361)
T 4f9c_A          263 IRGS  266 (361)
T ss_dssp             HHCH
T ss_pred             hcCC
Confidence            6654

>4g31_A Eukaryotic translation initiation factor 2-alpha; deletion mutant, catalytic domain, synthetic inhibitor, TRAN transferase inhibitor complex; HET: 0WH; 2.28A {Homo sapiens} PDB: 4g34_A*

Probab=100.00  E-value=8.4e-35  Score=227.67  Aligned_cols=154  Identities=20%  Similarity=0.209  Sum_probs=115.1

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCC----CCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPT----TLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~----~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.++.. .....+++.+|+++|++++|||||+++++|.+.....    ...+...|++||||
T Consensus        18 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~E~~il~~l~HpnIV~~~~~~~~~~~~~~~~~~~~~~~l~ivmE~~   97 (299)
T 4g31_A           18 FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLEKNTTEKLQPSSPKVYLYIQMQLC   97 (299)
T ss_dssp             --EEEEEEETTTCCEEEEEEEEECSSHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEEC----------CEEEEEEEECC
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEEEecCccccccccCCCcEEEEEEecC
Confidence            788998 2    334445544433 3344577899999999999999999999874422110    11233479999999


Q ss_pred             ccccHHHHH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          75 TKTTKARFY-----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        75 ~~~~l~~~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      .+|+|..+.           ..+..++ .|+++||+|||+++       |+||       +||+|||+++          
T Consensus        98 ~gg~L~~~l~~~~~~~~~~~~~~~~i~-~qi~~al~ylH~~~IiHRDlKp~NILl~~~~~vKl~DFGla~~~~~~~~~~~  176 (299)
T 4g31_A           98 RKENLKDWMNGRCTIEERERSVCLHIF-LQIAEAVEFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQT  176 (299)
T ss_dssp             CSCCHHHHHHTCCSGGGSCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCCCC-----------
T ss_pred             CCCcHHHHHHhcCCCChhHHHHHHHHH-HHHHHHHHHHHHCcCccccCcHHHeEECCCCcEEEccCccceecCCCccccc
Confidence            999998863           2355677 89999999999998       7777       5999999854          


Q ss_pred             -------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         120 -------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       120 -------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                                   .+||+.|  +|||++.+.. |+.++||||+||++|||++   ||.+
T Consensus       177 ~~~~~~~~~~~~~~~GT~~Y--mAPE~~~~~~-y~~~~DiwSlGvilyell~---Pf~~  229 (299)
T 4g31_A          177 VLTPMPAYARHTGQVGTKLY--MSPEQIHGNS-YSHKVDIFSLGLILFELLY---PFST  229 (299)
T ss_dssp             ---------------CCCTT--SCHHHHTTCC-CCTHHHHHHHHHHHHHHHS---CCSS
T ss_pred             cccccccccccCCcccCccc--cCHHHHcCCC-CCCHHHHHHHHHHHHHHcc---CCCC
Confidence                         2589999  9999998865 9999999999999999995   6754

>3v5w_A G-protein coupled receptor kinase 2; inhibitor complex, protein kinase, beta propeller, RGS homol domain; HET: 8PR; 2.07A {Homo sapiens} PDB: 3cik_A* 3krw_A* 3krx_A* 1omw_A 1ym7_A 2bcj_A* 3uzs_A 3uzt_A 3pvu_A* 3psc_A* 3pvw_A* 1bak_A

Probab=100.00  E-value=3.6e-33  Score=236.93  Aligned_cols=152  Identities=17%  Similarity=0.190  Sum_probs=121.7

Q ss_pred             cccccc-----cCCccccccccccc---hhhhhHHHHH---HHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD---VNVETQAKAE---GKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~---~~~~~~~~~E---~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||.     +++..++|.+.+..   .+......+|   +++++.++|||||+++++|        .+....|+||||
T Consensus       202 fG~V~la~~~~tg~~~AiK~i~K~~i~~~~~~~~~~~E~~~l~ll~~~~HP~IV~l~~~f--------~~~~~lylVmEy  273 (689)
T 3v5w_A          202 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF--------HTPDKLSFILDL  273 (689)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE--------ECSSEEEEEECC
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHcchhhhHHHHHHHHHHHHHHhhCCCCCEeEEEEEE--------EECCEEEEEEec
Confidence            788997     34455566665421   1222334444   5666778899999999976        567789999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------ccc
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVC  122 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~  122 (188)
                      |.||+|..+        +..++.++ +||+.||+|||+++       |+||       +||+|||++.         .+|
T Consensus       274 ~~GGdL~~~l~~~~~l~E~~a~~y~-~qIl~aL~yLH~~gIiHRDLKPeNILld~~G~vKL~DFGlA~~~~~~~~~t~~G  352 (689)
T 3v5w_A          274 MNGGDLHYHLSQHGVFSEADMRFYA-AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  352 (689)
T ss_dssp             CCSCBHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCCCCSCCS
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCchHHeEEeCCCCEEecccceeeecCCCCCCCccC
Confidence            999999875        45677888 89999999999998       7777       5999999854         679


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      |+.|  +|||++.....|+.++||||+||++|||++|++||.+.+
T Consensus       353 Tp~Y--mAPEvl~~~~~y~~~vDiWSLGvilYEmLtG~~PF~~~~  395 (689)
T 3v5w_A          353 THGY--MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHK  395 (689)
T ss_dssp             CGGG--CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCTTCGGG
T ss_pred             CcCc--cCHHHHhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCC
Confidence            9999  999999754459999999999999999999999997643

>3hmm_A TGF-beta receptor type-1; ALK5, kinase, inhibitor, quinazoline, aortic aneurysm, ATP-binding, craniosynostosis, disease mutation, disulfide bond; HET: 855; 1.70A {Homo sapiens} PDB: 1vjy_A* 3gxl_A* 3tzm_A* 2wot_A* 2wou_A* 1py5_A* 1rw8_A*

Probab=99.97  E-value=2.3e-32  Score=214.29  Aligned_cols=151  Identities=15%  Similarity=0.125  Sum_probs=110.1

Q ss_pred             cccccccCCccc-cccccccchhhhhHHHH--HHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQQSKWSP-NTPMARCDVNVETQAKA--EGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~~~~~~~-~~~i~~~~~~~~~~~~~--E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+.. +.. .+|+|....+..+.+.+  |+..+.+++|||||+++++|.+..    ......++|||||.+|+|..
T Consensus        16 fG~Vy~~~-~~g~~VAvK~l~~~~~~~~~~e~Ei~~~~~l~HpNIv~l~g~~~~~~----~~~~~~~lV~Ey~~~gsL~~   90 (303)
T 3hmm_A           16 FGEVWRGK-WRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKDN----GTWTQLWLVSDYHEHGSLFD   90 (303)
T ss_dssp             SSEEEEEE-ETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEEC----SSSEEEEEEEECCTTCBHHH
T ss_pred             CeEEEEEE-ECCEEEEEEEECccchhhHHHHHHHHHHhcCCCCCCCcEEEEEEecC----CCceEEEEEecCCCCCcHHH
Confidence            89999821 112 44555543344444444  555556889999999999874321    11235799999999999998


Q ss_pred             HH-------HHHHHHHHHHHHHHHHHHhhc--------C-------CCCe-------EEEecCCccc-------------
Q psy7174          82 FY-------SHLRYLENQQILEGLQALKSS--------M-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        82 ~~-------~~~~~~~~~qi~~gl~~lH~~--------~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      +.       +.+..++ .|++.||.|||++        +       |+||       +||+|||+++             
T Consensus        91 ~l~~~~l~~~~~~~i~-~~ia~gl~ylH~~~~~~~~~~~IiHRDlKp~NILl~~~~~~Ki~DFGla~~~~~~~~~~~~~~  169 (303)
T 3hmm_A           91 YLNRYTVTVEGMIKLA-LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAP  169 (303)
T ss_dssp             HHHHCCBCHHHHHHHH-HHHHHHHHHHHCCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEESCC-
T ss_pred             HHHhCCCCHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCEeeccCCcccEEECCCCCEEEEeCCCCccccCCCCceeeec
Confidence            63       3455566 7999999999986        3       6666       5999999853             


Q ss_pred             --ccccccccCCCCccccccC-----CCCchhHHHHHHHHHHHHHhCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGAR-----MYGVGIDMWAVGCIICELLLKAPFL  163 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~-----~~~~~~DiwslG~il~el~~g~~pf  163 (188)
                        .+||+.|  +|||++.+..     .|+.++|||||||++|||++|.+||
T Consensus       170 ~~~~GT~~y--mAPE~l~~~~~~~~~~~~~k~DVwS~Gvvl~El~tg~~~~  218 (303)
T 3hmm_A          170 NHRVGTKRY--MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIG  218 (303)
T ss_dssp             ----CCGGG--CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBT
T ss_pred             ccccccccc--cCHHHhcccccccCCccChhHhhhhHHHHHHHHHHCCCCC
Confidence              3589999  9999986532     2678999999999999999997765

>3niz_A Rhodanese family protein; structural genomics, structural genomics consortium, SGC, phosphotransferase, cyclin dependent kinase; HET: ADP; 2.40A {Cryptosporidium parvum} SCOP: d.144.1.7 PDB: 2qkr_A*

Probab=99.97  E-value=7e-31  Score=206.11  Aligned_cols=173  Identities=28%  Similarity=0.514  Sum_probs=137.3

Q ss_pred             cccccc-c---CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .   ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...+++|||+.++.
T Consensus        34 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~l  105 (311)
T 3niz_A           34 YGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDVI--------HSERCLTLVFEFMEKDL  105 (311)
T ss_dssp             SCEEEEEEETTSCEEEEEEEC------CHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CCSSCEEEEEECCSEEH
T ss_pred             CeEEEEEEECCCCEEEEEEEecccccchhhHHHHHHHHHHHHcCCCCEeeeeeEE--------ccCCEEEEEEcCCCCCH
Confidence            688887 2   223334433322  223346788999999999999999999986        45678899999998644


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      +..+        +..+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..+|..
T Consensus       106 ~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~  184 (311)
T 3niz_A          106 KKVLDENKTGLQDSQIKIYL-YQLLRGVAHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLW  184 (311)
T ss_dssp             HHHHHTCTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEETTSCCC---CCCCCCT
T ss_pred             HHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCchHhEEECCCCCEEEccCcCceecCCCcccccCCcccCC
Confidence            4433        34566677 89999999999998       6666       5999999864           356888


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+...++.|.+..||
T Consensus       185 y--~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  245 (311)
T 3niz_A          185 Y--RAPDVLMGSKKYSTSVDIWSIGCIFAEMITGKPLFPGVTDDDQLPKIFSILGTPNPREWP  245 (311)
T ss_dssp             T--CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSTTTHHHHHHHHHCCCCTTTSG
T ss_pred             c--CCHHHhcCCCCCCchHHhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHHCCCChHHhh
Confidence            9  999999775558999999999999999999999999999989999999999999888775

>3ttj_A Mitogen-activated protein kinase 10; JNK3, protein kinase in transferase-transferase inhibitor complex; HET: JBI; 2.10A {Homo sapiens} PDB: 3tti_A* 1jnk_A*

Probab=99.97  E-value=3.7e-31  Score=218.39  Aligned_cols=175  Identities=25%  Similarity=0.407  Sum_probs=137.7

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+++.+|+++++.++||||++++++|....  ...+....+++|||+.++
T Consensus        75 ~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~~~~~~~lv~E~~~~~  152 (464)
T 3ttj_A           75 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK--TLEEFQDVYLVMELMDAN  152 (464)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEESGGGSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC--STTTCCEEEEEEECCSEE
T ss_pred             CeEEEEEEECCCCCEEEEEEECccccChHHHHHHHHHHHHHHhCCCCCCCcEEEEEccCC--ccccCCeEEEEEeCCCCC
Confidence            678877 2    233334444432  3445677889999999999999999999863211  112335679999999887


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccC
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                      .+..+     +..+..++ .|++.||+|||+++       |+||       +||+|||++.          ..||++|  
T Consensus       153 l~~~~~~~l~~~~~~~~~-~qil~aL~~lH~~~iiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y--  229 (464)
T 3ttj_A          153 LCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY--  229 (464)
T ss_dssp             HHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCCC-----CCCC----CCCTT--
T ss_pred             HHHHHhhcCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCChHhEEEeCCCCEEEEEEEeeeecCCCcccCCCcccccc--
Confidence            66554     45677777 89999999999998       6666       5999999854          4678999  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      +|||++.+.. |+.++||||+||++|||++|++||.+.+..+++.+|.+.++.|+++
T Consensus       230 ~aPE~~~~~~-~~~~~DiwSlG~il~ell~g~~pF~g~~~~~~~~~i~~~lg~p~~~  285 (464)
T 3ttj_A          230 RAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPE  285 (464)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCHH
T ss_pred             cCHHHHcCCC-CCHHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCHH
Confidence            9999998865 9999999999999999999999999999999999999999888754

>2pmi_A Negative RE, cyclin-dependent protein kinase PHO85; cyclin-dependent kinase, signaling protein,transfera cycle complex; HET: MES AGS; 2.90A {Saccharomyces cerevisiae} PDB: 2pk9_A*

Probab=99.97  E-value=1.5e-30  Score=204.61  Aligned_cols=172  Identities=27%  Similarity=0.539  Sum_probs=136.8

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.++.. .....+.+.+|++++++++||||+++++++        .++...+++|||+.+ +
T Consensus        18 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~-~   88 (317)
T 2pmi_A           18 YATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHENIVRLYDVI--------HTENKLTLVFEFMDN-D   88 (317)
T ss_dssp             -CEEEEEECSSSCCEEEEEEEECCSTTCSCHHHHHHHHHHTTCCBTTBCCEEEEE--------CCTTEEEEEEECCCC-B
T ss_pred             CEEEEEEEECCCCcEEEEEEeecccccccHHHHHHHHHHHHhcCCCCcceEEEEE--------EECCeEEEEEEecCC-C
Confidence            678887 2    333445544432 233456788999999999999999999986        445678999999985 6


Q ss_pred             HHHHH--------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          79 KARFY--------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        79 l~~~~--------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      +..+.              ..+..++ .|++.||.|||+.+       |+||       +||+|||++.           
T Consensus        89 L~~~l~~~~~~~~~~~~~~~~~~~~~-~qi~~aL~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  167 (317)
T 2pmi_A           89 LKKYMDSRTVGNTPRGLELNLVKYFQ-WQLLQGLAFCHENKILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSS  167 (317)
T ss_dssp             HHHHHHHHHSSSCCCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCSSCEETTSCCCCCCC
T ss_pred             HHHHHHhccccccccCCCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCChHHeEEcCCCCEEECcCccceecCCCcccCCC
Confidence            65542              3355666 79999999999998       6666       5999999854           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..+|..|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+.+..+.|++..||
T Consensus       168 ~~~t~~y--~aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  234 (317)
T 2pmi_A          168 EVVTLWY--RAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNESLWP  234 (317)
T ss_dssp             CCSCCTT--CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCTTTCG
T ss_pred             Ccccccc--cCchHhhCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhHhh
Confidence            3568889  999999765458999999999999999999999999999999999999988888777664

>3soa_A Calcium/calmodulin-dependent protein kinase type alpha with A beta 7 linker; phosphorylation, cytosolic, transferase-transferase inhibitor complex; HET: DB8; 3.55A {Homo sapiens}

Probab=99.97  E-value=2.7e-30  Score=212.11  Aligned_cols=171  Identities=19%  Similarity=0.176  Sum_probs=136.1

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|++++++++||||+++++++        .++...+++|||+.+|
T Consensus        24 fg~V~~~~~~~~~~~~a~K~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~--------~~~~~~~lv~E~~~gg   95 (444)
T 3soa_A           24 FSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREARICRLLKHPNIVRLHDSI--------SEEGHHYLIFDLVTGG   95 (444)
T ss_dssp             -CEEEEEEETTTTEEEEEEEEESCSCHHHHHHHHHHHHHHHHHCCBTTBCCEEEEE--------ECSSEEEEEECCCBCC
T ss_pred             CeEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCcCCCeEEEEE--------EECCEEEEEEEeCCCC
Confidence            788887 2    233344444432  344567789999999999999999999986        4567889999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc-----------cc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~-----------~~  121 (188)
                      +|...        +..+..++ .|++.||.|||+++       |+||          +||+|||++.           ..
T Consensus        96 ~L~~~i~~~~~~~e~~~~~i~-~qil~aL~~lH~~givHrDlKp~NIll~~~~~~~~vkL~DFG~a~~~~~~~~~~~~~~  174 (444)
T 3soa_A           96 ELFEDIVAREYYSEADASHCI-QQILEAVLHCHQMGVVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFA  174 (444)
T ss_dssp             BHHHHHHHCSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCSSTTEEESBSSTTCCEEECCCSSCBCCCTTCCBCCCSC
T ss_pred             CHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCCHHHEEEeccCCCCcEEEccCceeEEecCCCceeeccc
Confidence            99764        34566777 89999999999998       6666          5999999863           45


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      ||+.|  +|||++.+.. |+.++||||+||++|+|++|.+||.+.+.......+.......+...|
T Consensus       175 gt~~Y--~APE~l~~~~-~~~~~DIwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  237 (444)
T 3soa_A          175 GTPGY--LSPEVLRKDP-YGKPVDLWACGVILYILLVGYPPFWDEDQHRLYQQIKAGAYDFPSPEW  237 (444)
T ss_dssp             SCGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCTTTT
T ss_pred             CCccc--CCHHHhcCCC-CCCccccHHHHHHHHHHHhCCCCCCCccHHHHHHHHHhCCCCCCcccc
Confidence            78899  9999998765 999999999999999999999999999888888888766554444444

>2bdw_A Hypothetical protein K11E8.1D; kinase, calmodulin activated, transferase; 1.80A {Caenorhabditis elegans} PDB: 2wel_A* 2v7o_A* 2vz6_A* 1cdm_B 1cm1_B 1cm4_B

Probab=99.97  E-value=3.1e-30  Score=206.64  Aligned_cols=165  Identities=21%  Similarity=0.155  Sum_probs=132.9

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...+++|||+.++
T Consensus        42 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~--------~~~~~~~lv~e~~~gg  113 (362)
T 2bdw_A           42 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI--------QEESFHYLVFDLVTGG  113 (362)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCCSC
T ss_pred             CeEEEEEEECCCCCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EeCCEEEEEEecCCCC
Confidence            678887 2    334445555432  344557789999999999999999999986        4466789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~  122 (188)
                      +|...        +..+..++ .|++.||.|||+++       |+||          +||+|||++.          ..|
T Consensus       114 ~L~~~l~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~g  192 (362)
T 2bdw_A          114 ELFEDIVAREFYSEADASHCI-QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG  192 (362)
T ss_dssp             BHHHHHTTCSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCSGGGEEESCSSTTCCEEECCCTTCBCCTTCCSCCCSCS
T ss_pred             CHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEeecCcceEecCCcccccCCC
Confidence            99764        35566777 89999999999998       5555          5999999854          467


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      |+.|  +|||++.+.. |+.++||||+||++|+|++|.+||.+.+.......+......
T Consensus       193 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~Pf~~~~~~~~~~~i~~~~~~  248 (362)
T 2bdw_A          193 TPGY--LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYD  248 (362)
T ss_dssp             CTTT--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCC
T ss_pred             Cccc--cCHHHHccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCCC
Confidence            8899  9999998765 999999999999999999999999998887777777665433

>3oz6_A Mitogen-activated protein kinase 1, serine/threon protein kinase; structural genomics consortium, SGC, transferase; 2.37A {Cryptosporidium parvum iowa II}

Probab=99.97  E-value=3.3e-30  Score=207.87  Aligned_cols=170  Identities=26%  Similarity=0.417  Sum_probs=134.6

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+.+.  .....+++.+|+.+++.+. ||||+++++++..      .+....+++|||+.+
T Consensus        22 ~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~~h~niv~l~~~~~~------~~~~~~~lv~e~~~~   95 (388)
T 3oz6_A           22 YGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLNVLRA------DNDRDVYLVFDYMET   95 (388)
T ss_dssp             --CEEEEEETTTCCEEEEEEECC--CCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEEEC------TTSSCEEEEEECCSE
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccChHHHHHHHHHHHHHHhccCCCCCCeeeeEEec------CCCCEEEEEecccCc
Confidence            688887     2333444444332  3455677889999999997 9999999998632      334578999999985


Q ss_pred             ccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------------
Q psy7174          77 TTKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------------  119 (188)
Q Consensus        77 ~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------------  119 (188)
                       ++..+       ...+..++ .|++.||+|||+.+       |+||       +||+|||+++                
T Consensus        96 -~L~~~~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  173 (388)
T 3oz6_A           96 -DLHAVIRANILEPVHKQYVV-YQLIKVIKYLHSGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSI  173 (388)
T ss_dssp             -EHHHHHHHTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEESSSCCCCCCCGGGCC
T ss_pred             -CHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHhCCEEeCCCCHHHeEEcCCCCEEecCCcccccccccccccccccccc
Confidence             66554       24466677 89999999999998       6666       5999999864                


Q ss_pred             ----------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         120 ----------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       120 ----------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                                      .+||++|  +|||++.+...|+.++||||+||++|||++|++||.+.+..+++.+|...++.|+
T Consensus       174 ~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~p~  251 (388)
T 3oz6_A          174 NENTENFDDDQPILTDYVATRWY--RAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGVIDFPS  251 (388)
T ss_dssp             C---------------CCCGGGG--CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             cccccccccccccccCCcccCCc--CCHHHhcCCCCCCChhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCC
Confidence                            2588899  9999998755599999999999999999999999999999999999998888876


Q ss_pred             C
Q psy7174         184 E  184 (188)
Q Consensus       184 ~  184 (188)
                      +
T Consensus       252 ~  252 (388)
T 3oz6_A          252 N  252 (388)
T ss_dssp             H
T ss_pred             H
Confidence            4

>3fe3_A MAP/microtubule affinity-regulating kinase 3; serine/threonine protein kinase, MARK;PAR-1, UBA domai TAK1;P78;MARK3, ATP-binding; 1.90A {Homo sapiens} PDB: 2qnj_A 1y8g_A* 1zmw_A 1zmu_A 1zmv_A 2wzj_A 2r0i_A 2hak_A 3iec_A

Probab=99.97  E-value=3.7e-30  Score=203.69  Aligned_cols=163  Identities=16%  Similarity=0.201  Sum_probs=131.0

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||.     +++..++|.+.+.  .....+++.+|+++++.++||||+++++++        .++...+++|||+.++
T Consensus        28 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~--------~~~~~~~lv~e~~~~~   99 (328)
T 3fe3_A           28 FAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEVI--------ETEKTLYLIMEYASGG   99 (328)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCTTC
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhcCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------EECCEEEEEEECCCCC
Confidence            678886     2334445554442  344567788999999999999999999986        4466789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------cccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLY  125 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~  125 (188)
                      ++..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.          ..||+.
T Consensus       100 ~L~~~l~~~~~l~~~~~~~~~-~qi~~al~~lH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~  178 (328)
T 3fe3_A          100 EVFDYLVAHGRMKEKEARSKF-RQIVSAVQYCHQKRIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPP  178 (328)
T ss_dssp             BHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTCCGGGSSSCGGGTTSSSGG
T ss_pred             cHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCEeccCCCHHHEEEcCCCCEEEeeccCceecCCCCccccccCCcc
Confidence            99875        34566777 89999999999998       6666       5999999864          457889


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |  +|||++.+....+.++||||+||++|+|++|++||.+.+..+...++...
T Consensus       179 y--~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  229 (328)
T 3fe3_A          179 Y--AAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPFDGQNLKELRERVLRG  229 (328)
T ss_dssp             G--CCHHHHHTCCCCSHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             e--eCcccccCCCcCCchhhhhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence            9  99999987663458999999999999999999999998877776666543

>1ob3_A PFPK5, cell division control protein 2 homolog; transferase, serine/threonine-protein kinase, ATP-binding, phosphorylation, CDK; 1.9A {Plasmodium falciparum} SCOP: d.144.1.7 PDB: 1v0p_A* 1v0o_A* 1v0b_A

Probab=99.97  E-value=3.3e-30  Score=199.85  Aligned_cols=172  Identities=27%  Similarity=0.492  Sum_probs=136.0

Q ss_pred             cccccc-c---CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .   ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...++++|++.+ +
T Consensus        15 ~g~V~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~-~   85 (288)
T 1ob3_A           15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI--------HTKKRLVLVFEHLDQ-D   85 (288)
T ss_dssp             TEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE--------ECSSCEEEEEECCSE-E
T ss_pred             CEEEEEEEcCCCCEEEEEEEeccccccccchhHHHHHHHHHhcCCCCEeeeeeEE--------ccCCeEEEEEEecCC-C
Confidence            688887 2   233334444332  233446788999999999999999999986        345678999999986 5


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          79 KARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        79 l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      +..+         ...+..++ .|++.||.|||+++       |+||       +||+|||++.           ..+|.
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  164 (288)
T 1ob3_A           86 LKKLLDVCEGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTL  164 (288)
T ss_dssp             HHHHHHTSTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCC
T ss_pred             HHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEeECccccccCccccccccccccc
Confidence            5443         34466677 89999999999998       6666       5999999753           35688


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+.++.+..+.|....||
T Consensus       165 ~y--~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  226 (288)
T 1ob3_A          165 WY--RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (288)
T ss_dssp             TT--CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cc--cCchheeCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHHCCCChhhch
Confidence            89  999999765558999999999999999999999999999999999999888888777665

>2x4f_A Myosin light chain kinase family member 4; LUNG, breast cancer, transferase, serine/threonine-protein kinase, nucleotide-binding; HET: 16X 1PE; 2.67A {Homo sapiens}

Probab=99.97  E-value=3.9e-30  Score=206.88  Aligned_cols=167  Identities=20%  Similarity=0.185  Sum_probs=132.7

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.++.......+.+.+|++++++++||||++++++|        .++...+++|||+.+++|
T Consensus       102 ~g~Vy~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~--------~~~~~~~lv~E~~~~~~L  173 (373)
T 2x4f_A          102 FGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQLYDAF--------ESKNDIVLVMEYVDGGEL  173 (373)
T ss_dssp             --CEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCTTCEE
T ss_pred             CEEEEEEEEcCCCcEEEEEEEcccccccHHHHHHHHHHHHhCCCCCCCeEEEEE--------EECCEEEEEEeCCCCCcH
Confidence            688887 2    233345555444445667899999999999999999999986        345678999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ...         +..+..++ .|++.||.|||+.+       |+||         +||+|||++.          ..||+
T Consensus       174 ~~~l~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~  252 (373)
T 2x4f_A          174 FDRIIDESYNLTELDTILFM-KQICEGIRHMHQMYILHLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTP  252 (373)
T ss_dssp             HHHHHHTGGGCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEEEETTTTEEEECCCSSCEECCTTCBCCCCCSSC
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCcccccCCHHHEEEecCCCCcEEEEeCCCceecCCccccccccCCC
Confidence            664         23455666 79999999999998       6665         5899999854          34788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      .|  +|||++.... ++.++|||||||++|+|++|+.||.+.+..+.+..+......++
T Consensus       253 ~y--~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~  308 (373)
T 2x4f_A          253 EF--LAPEVVNYDF-VSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLNNILACRWDLE  308 (373)
T ss_dssp             TT--CCHHHHTTCB-CCHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCSC
T ss_pred             cE--eChhhccCCC-CCcHHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhccCCCC
Confidence            99  9999997755 89999999999999999999999999998888888876544433

>2yab_A Death-associated protein kinase 2; apoptosis, transferase; HET: AMP; 1.90A {Mus musculus} PDB: 2yaa_A* 2ya9_A*

Probab=99.97  E-value=2.3e-30  Score=207.42  Aligned_cols=162  Identities=19%  Similarity=0.218  Sum_probs=130.9

Q ss_pred             cccccc-----cCCccccccccccch------hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDV------NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~------~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+     +++..++|.+++...      ...+.+.+|++++++++||||++++++|        .++...+++|||
T Consensus        25 fg~V~~~~~~~~~~~~avK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~--------~~~~~~~lv~e~   96 (361)
T 2yab_A           25 FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNIITLHDVY--------ENRTDVVLILEL   96 (361)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEEC
T ss_pred             CEEEEEEEECCCCCEEEEEEEEccccccccchhHHHHHHHHHHHHHhCCCcCCCcEEEEE--------EeCCEEEEEEEc
Confidence            678887     233444555554321      1346789999999999999999999986        446688999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc--------
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR--------  119 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~--------  119 (188)
                      +.+++|..+        +..+..++ .|++.||.|||+.+       |+||           +||+|||++.        
T Consensus        97 ~~gg~L~~~l~~~~~l~~~~~~~i~-~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~~~vkl~DFG~a~~~~~~~~~  175 (361)
T 2yab_A           97 VSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF  175 (361)
T ss_dssp             CCSCBHHHHHTTCSCCBHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCSSCEECCTTCCC
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEEeCCCCCccCEEEEecCCceEcCCCCcc
Confidence            999999876        35567777 89999999999998       5554           6999999854        


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                        ..||+.|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.+..+.+..|...
T Consensus       176 ~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslGvil~~ll~g~~Pf~~~~~~~~~~~i~~~  233 (361)
T 2yab_A          176 KNIFGTPEF--VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITAV  233 (361)
T ss_dssp             CCCCSCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHTT
T ss_pred             ccCCCCccE--ECchHHcCCC-CCccccHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhc
Confidence              4578899  9999998765 999999999999999999999999998887777766554

>1o6l_A RAC-beta serine/threonine protein kinase; protein kinase, transferase, serine/threonine-protein kinase; HET: TPO ANP; 1.6A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jdo_A* 2jdr_A* 2uw9_A* 2x37_A* 2x39_A* 2xh5_A* 3d0e_A* 3e87_A* 3e88_A* 3e8d_A* 1o6k_A* 1mrv_A 1mry_A 1gzn_A 1gzk_A 1gzo_A 3qkl_A* 3ocb_A* 3ow4_A* 3qkk_A* ...

Probab=99.97  E-value=6.6e-30  Score=203.02  Aligned_cols=161  Identities=14%  Similarity=0.132  Sum_probs=130.8

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+++.   ..+..+.+.+|+++++.++||||++++++|        .+....+++|||+.+
T Consensus        18 fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~l~~~~--------~~~~~~~lv~E~~~g   89 (337)
T 1o6l_A           18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF--------QTHDRLCFVMEYANG   89 (337)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHhhhhhHHHHHHHHHHHHHhCCCCcCcceEEEE--------EeCCEEEEEEeCCCC
Confidence            688887     2344455555542   234456788999999999999999999976        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      |+|...        +..++.++ .|++.||.|||+++       |+||       +||+|||++.           ..||
T Consensus        90 g~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~gt  168 (337)
T 1o6l_A           90 GELFFHLSRERVFTEERARFYG-AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  168 (337)
T ss_dssp             CBHHHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEEC
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCcCCHHHEEECCCCCEEEeeccchhhcccCCCcccccccC
Confidence            999765        34566677 89999999999998       6666       5999999754           4578


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      +.|  +|||++.+.. ++.++|+||+||++|||++|++||.+.+.......|..
T Consensus       169 ~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  219 (337)
T 1o6l_A          169 PEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILM  219 (337)
T ss_dssp             GGG--CCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             hhh--CChhhhcCCC-CCchhhcccchhHHHHHhcCCCCCCCCCHHHHHHHHHc
Confidence            899  9999998765 89999999999999999999999998887777666654

>3o0g_A Cell division protein kinase 5; kinase activator complex, kinase inhibitor complex, transferase-transferase activator complex; HET: 3O0; 1.95A {Homo sapiens} SCOP: d.144.1.7 PDB: 1unh_A* 1ung_A* 1unl_A* 1h4l_A

Probab=99.97  E-value=7.4e-30  Score=198.17  Aligned_cols=173  Identities=32%  Similarity=0.502  Sum_probs=137.5

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...+++|||+.++
T Consensus        15 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~   86 (292)
T 3o0g_A           15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL--------HSDKKLTLVFEFCDQD   86 (292)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE--------EETTEEEEEEECCSEE
T ss_pred             CeEEEEEEECCCCceEEEEeeeccCCcCCcchHHHHHHHHHhcCCCCCEeeEEeEE--------EeCCEEEEEEecCCCC
Confidence            688887 2    233345544432  233446788999999999999999999986        3466789999999876


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      .+..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.           ..+|.
T Consensus        87 l~~~~~~~~~~l~~~~~~~~~-~ql~~~l~~lH~~~ivH~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  165 (292)
T 3o0g_A           87 LKKYFDSCNGDLDPEIVKSFL-FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL  165 (292)
T ss_dssp             HHHHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCSCCSCCCSCCSCG
T ss_pred             HHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEeecccceecCCccccccCCcccc
Confidence            66554        34566677 89999999999998       6666       5999999864           34678


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCC-CCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAP-FLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~-pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.+...++.++||||+||++|+|++|.. +|.+.+..+.+..+.+..+.|++..||
T Consensus       166 ~y--~aPE~~~~~~~~~~~~DiwslG~il~~l~~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~  228 (292)
T 3o0g_A          166 WY--RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP  228 (292)
T ss_dssp             GG--CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred             CC--cChHHHcCCCCcCchHHHHHHHHHHHHHHHcCCCCcCCCCHHHHHHHHHHHhCCCChhhhh
Confidence            89  999999776558999999999999999997655 577788888899999999999888875

>3txo_A PKC-L, NPKC-ETA, protein kinase C ETA type; phosphotransferase, transferase-transferase inhibito; HET: TPO 07U; 2.05A {Homo sapiens}

Probab=99.97  E-value=4.5e-30  Score=205.19  Aligned_cols=163  Identities=16%  Similarity=0.168  Sum_probs=132.1

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|.++++.+ +||||++++++|        .+....+++|||+.
T Consensus        36 fg~V~~~~~~~~~~~~AvK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~--------~~~~~~~lv~E~~~  107 (353)
T 3txo_A           36 FGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLFCCF--------QTPDRLFFVMEFVN  107 (353)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHHTTHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEEECCC
T ss_pred             CEEEEEEEEcCCCCEEEEEEEEHHHhcchhHHHHHHHHHHHHHhccCCCceeeEEEEE--------EeCCEEEEEEeCCC
Confidence            788887     2334445555542   234456688999999988 699999999986        45668899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..++.++ .|++.||.|||+++       |+||       +||+|||++.           .+|
T Consensus       108 gg~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~givHrDlkp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~g  186 (353)
T 3txo_A          108 GGDLMFHIQKSRRFDEARARFYA-AEIISALMFLHDKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCG  186 (353)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCC---------C
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCCcccCCCHHHEEECCCCCEEEccccceeecccCCccccccCC
Confidence            9999875        34566777 89999999999998       6676       5999999754           458


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+...+|...-
T Consensus       187 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~~  240 (353)
T 3txo_A          187 TPDY--IAPEILQEML-YGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDE  240 (353)
T ss_dssp             CGGG--CCHHHHHHHH-CTTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCC
T ss_pred             CcCe--EChhhcCCCC-cCCccCCCcchHHHHHHHhCCCCCCCCCHHHHHHHHHcCC
Confidence            9999  9999998765 9999999999999999999999999999888888886643

>3v8s_A RHO-associated protein kinase 1; dimerization, myosin, transferase, inhibitor, transf transferase inhibitor complex; HET: 0HD; 2.29A {Homo sapiens} PDB: 3twj_A* 3tv7_A* 2etr_A* 2esm_A* 2eto_A* 2etk_A* 3d9v_A* 3ncz_A* 3ndm_A* 2v55_A* 2f2u_A* 2h9v_A*

Probab=99.97  E-value=4.2e-30  Score=209.04  Aligned_cols=163  Identities=17%  Similarity=0.170  Sum_probs=132.1

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   .....+.+.+|+++++.++||||++++++|        .++...+++|||+.+
T Consensus        82 fG~V~~~~~~~~~~~~AiK~~~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--------~~~~~~~lV~E~~~g  153 (410)
T 3v8s_A           82 FGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFYAF--------QDDRYLYMVMEYMPG  153 (410)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTCCCSTHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CEEEEEEEECCCCcEEEEEEEehhhhhhhHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EECCEEEEEEeCCCC
Confidence            788887 2    233445555442   223445688999999999999999999986        456788999999999


Q ss_pred             ccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccc
Q psy7174          77 TTKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCT  123 (188)
Q Consensus        77 ~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~  123 (188)
                      |+|..+       +..++.++ .|++.||.|||+.+       |+||       +||+|||++.            .+||
T Consensus       154 g~L~~~l~~~~~~e~~~~~~~-~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFG~a~~~~~~~~~~~~~~~gt  232 (410)
T 3v8s_A          154 GDLVNLMSNYDVPEKWARFYT-AEVVLALDAIHSMGFIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGT  232 (410)
T ss_dssp             EEHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSEEECCSCCSC
T ss_pred             CcHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeccCCHHHeeECCCCCEEEeccceeEeeccCCcccccCCcCC
Confidence            999876       34566777 89999999999998       6666       5999999853            4689


Q ss_pred             ccccCCCCccccccC---CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         124 LYCTRGAPELLFGAR---MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~---~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +.|  +|||++.+..   .|+.++|||||||++|||++|++||.+.+..+...+|...
T Consensus       233 ~~Y--~APE~l~~~~~~~~~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  288 (410)
T 3v8s_A          233 PDY--ISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYADSLVGTYSKIMNH  288 (410)
T ss_dssp             GGG--CCHHHHHTTTTTCEEETHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTH
T ss_pred             ccc--cCHHHhhccCCCcCCCCcceEecchHHHHHHHhCCCCCCCCChhhHHHHHHhc
Confidence            999  9999997643   2778999999999999999999999999998888888653

>1fot_A TPK1 delta, CAMP-dependent protein kinase type 1; open conformation, transferase; HET: TPO; 2.80A {Saccharomyces cerevisiae} SCOP: d.144.1.7

Probab=99.97  E-value=8.4e-30  Score=200.88  Aligned_cols=162  Identities=14%  Similarity=0.185  Sum_probs=132.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+++.   ..+..+.+.+|+.+++.++||||+++++++        .++...+++|||+.+
T Consensus        19 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~Iv~~~~~~--------~~~~~~~lv~e~~~g   90 (318)
T 1fot_A           19 FGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF--------QDAQQIFMIMDYIEG   90 (318)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE--------ECSSEEEEEECCCCS
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhhhhHHHHHHHHHHHHhhCCCCCCceEeEEE--------EeCCEEEEEEeCCCC
Confidence            788887     2344455555542   224456788999999999999999999976        456788999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      |+|..+.        ..+..++ .|++.||.|||+++       |+||       +||+|||++.        ..||+.|
T Consensus        91 g~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~Dfg~a~~~~~~~~~~~gt~~y  169 (318)
T 1fot_A           91 GELFSLLRKSQRFPNPVAKFYA-AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDY  169 (318)
T ss_dssp             CBHHHHHHHTSSCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTT
T ss_pred             CCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCChheEEEcCCCCEEEeecCcceecCCccccccCCccc
Confidence            9998763        4466677 89999999999998       6666       5999999864        4688999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                        +|||++.+.. ++.++|+||+||++|||++|++||.+.+......+|...
T Consensus       170 --~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~  218 (318)
T 1fot_A          170 --IAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNA  218 (318)
T ss_dssp             --CCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHC
T ss_pred             --cCHhHhcCCC-CCcccchhhhHHHHHHHHhCCCCCCCCCHHHHHHHHHhC
Confidence              9999998765 899999999999999999999999998887777777654

>3mi9_A Cell division protein kinase 9; P-TEFB, HIV-1, protein binding; HET: TPO; 2.10A {Homo sapiens} PDB: 3mia_A* 4ec9_A* 4ec8_A* 3blh_A* 3blq_A* 3blr_A* 3lq5_A* 3my1_A* 3tn8_A* 3tnh_A* 3tni_A* 4bch_A* 4bci_A* 4bcj_A* 4bcf_A*

Probab=99.97  E-value=1.5e-29  Score=201.20  Aligned_cols=181  Identities=25%  Similarity=0.432  Sum_probs=138.0

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .......+.+|+++++.++||||+++++++..........+...+++|||+.++
T Consensus        30 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~  109 (351)
T 3mi9_A           30 FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD  109 (351)
T ss_dssp             TTSEEEEEETTTCCEEEEEECCCSSCSSSSCHHHHHHHHHHHHCCCTTBCCEEEEEEEC--------CEEEEEEECCSEE
T ss_pred             CcEEEEEEECCCCCEEEEEEEecccccccchHHHHHHHHHHHhccCCCcccHhheeeccccccccCCceEEEEEeccCCC
Confidence            678887 2    223334433332  233345788999999999999999999987443222222255689999999875


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------c
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------H  120 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------~  120 (188)
                      .+..+        ...+..++ .|++.||.|||+.+       |+||       +||+|||++.               .
T Consensus       110 l~~~l~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~  188 (351)
T 3mi9_A          110 LAGLLSNVLVKFTLSEIKRVM-QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNR  188 (351)
T ss_dssp             HHHHHHCTTSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCCCSSSSCCCCCSS
T ss_pred             HHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHHCCeeCCCCCHHHEEEcCCCCEEEccchhcccccccccccccccCCc
Confidence            54443        35567777 89999999999998       6666       5999999753               3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .||..|  +|||++.+...++.++||||+||++|+|++|.+||.+.+....+..+.+..+.++++.||
T Consensus       189 ~gt~~y--~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  254 (351)
T 3mi9_A          189 VVTLWY--RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVWP  254 (351)
T ss_dssp             CSCGGG--CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             ccccCc--cCchhhcCCCCCCcHhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCChhhcc
Confidence            457889  999999775558999999999999999999999999999999999999999988888775

>3fxz_A Serine/threonine-protein kinase PAK 1; transferase, ATP-binding, phosphorylation, allosteric enzyme, alternative splicing, apoptosis, cell junction; HET: TPO FLL; 1.64A {Homo sapiens} SCOP: d.144.1.7 PDB: 3fy0_A* 4daw_A* 3q52_A* 3q53_A* 1yhw_A 1f3m_C 1yhv_A 2hy8_1* 3q4z_A*

Probab=99.97  E-value=1.2e-29  Score=197.80  Aligned_cols=160  Identities=20%  Similarity=0.236  Sum_probs=127.4

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+........+.+.+|+.++++++||||++++++|        ..+...+++|||+.+++|
T Consensus        33 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~L  104 (297)
T 3fxz_A           33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY--------LVGDELWVVMEYLAGGSL  104 (297)
T ss_dssp             TEEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTTCBH
T ss_pred             CeEEEEEEECCCCcEEEEEEeecccccHHHHHHHHHHHHhcCCCCCCCeEeEEE--------EECCEEEEEEECCCCCCH
Confidence            677887 2    223334433333444556789999999999999999999986        345678999999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARFY-------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~~-------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+.       ..+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..||..| 
T Consensus       105 ~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y-  182 (297)
T 3fxz_A          105 TDVVTETCMDEGQIAAVC-RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW-  182 (297)
T ss_dssp             HHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGG-
T ss_pred             HHHHhhcCCCHHHHHHHH-HHHHHHHHHHHhCCceeCCCCHHHEEECCCCCEEEeeCCCceecCCcccccCCccCCcCc-
Confidence            8863       4566677 89999999999998       6666       5999999743           4578899 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                       +|||++.+.. ++.++||||+||++|+|++|..||.+.+.......+.
T Consensus       183 -~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~  229 (297)
T 3fxz_A          183 -MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIA  229 (297)
T ss_dssp             -CCHHHHHCSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             -cChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence             9999998765 8999999999999999999999998877665554443

>1kob_A Twitchin; kinase, intrasteric regulation; 2.30A {Aplysia californica} SCOP: d.144.1.7

Probab=99.97  E-value=1.6e-29  Score=204.33  Aligned_cols=164  Identities=17%  Similarity=0.145  Sum_probs=130.9

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+..........+.+|+++++.++||||+++++++        .++...+++|||+.+++|
T Consensus        64 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~--------~~~~~~~lv~E~~~gg~L  135 (387)
T 1kob_A           64 FGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF--------EDKYEMVLILEFLSGGEL  135 (387)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE--------ECSSEEEEEEECCCCCBH
T ss_pred             CEEEEEEEECCCCCEEEEEEecccchhhHHHHHHHHHHHHhCCCcCCCeEEEEE--------EeCCEEEEEEEcCCCCcH
Confidence            677887 2    222334433333334556789999999999999999999986        446778999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ..+         +..+..++ .|++.||.|||+.+       |+||         +||+|||++.          ..||.
T Consensus       136 ~~~l~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~givHrDlkp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~  214 (387)
T 1kob_A          136 FDRIAAEDYKMSEAEVINYM-RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA  214 (387)
T ss_dssp             HHHTTCTTCCBCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSG
T ss_pred             HHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeeecccchHHeEEecCCCCceEEEecccceecCCCcceeeeccCC
Confidence            775         34566677 89999999999988       5555         6999999864          35788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      .|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.+..+.+..+.....
T Consensus       215 ~y--~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~~~~~~~~~i~~~~~  267 (387)
T 1kob_A          215 EF--AAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDW  267 (387)
T ss_dssp             GG--CCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCC
T ss_pred             Cc--cCchhccCCC-CCCcccEeeHhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Confidence            99  9999998765 89999999999999999999999999888877777765433

>3mtl_A Cell division protein kinase 16; pctaire1, indirubin, structural genomics, structural consortium, SGC, transferase; HET: FEF; 2.40A {Homo sapiens}

Probab=99.97  E-value=3.3e-30  Score=203.27  Aligned_cols=172  Identities=28%  Similarity=0.500  Sum_probs=134.2

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .......+.+|++++++++||||+++++++        .++...+++|||+.+ +
T Consensus        15 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~-~   85 (324)
T 3mtl_A           15 YATVYKGKSKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLHDII--------HTEKSLTLVFEYLDK-D   85 (324)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECC------CCCCCCCHHHHSCCCCTTBCCEEEEE--------ECSSCEEEEEECCSE-E
T ss_pred             CEEEEEEEECCCCcEEEEEEEecccccccchhHHHHHHHHHhcCCCCCCeeeeEE--------eeCCEEEEEeccccc-C
Confidence            678887 2    223334444332 122223456899999999999999999986        446678999999986 5


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          79 KARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        79 l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      +..+         ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..+|.
T Consensus        86 l~~~~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~  164 (324)
T 3mtl_A           86 LKQYLDDCGNIINMHNVKLFL-FQLLRGLAYCHRQKVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTL  164 (324)
T ss_dssp             HHHHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEEESSCCGGGEEECTTCCEEECSSSEEECC------------CG
T ss_pred             HHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCccCCCcCHHHEEECCCCCEEEccCcccccccCCccccccccCcc
Confidence            5443         24566677 89999999999998       6666       5999999754           35688


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+.+.++.|++..||
T Consensus       165 ~y--~aPE~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (324)
T 3mtl_A          165 WY--RPPDILLGSTDYSTQIDMWGVGCIFYEMATGRPLFPGSTVEEQLHFIFRILGTPTEETWP  226 (324)
T ss_dssp             GG--CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cc--cChhhhcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChHhch
Confidence            89  999999775558999999999999999999999999999999999999999999998886

>1cm8_A Phosphorylated MAP kinase P38-gamma; phosphorylation, transferase; HET: TPO PTR ANP; 2.40A {Homo sapiens} SCOP: d.144.1.7

Probab=99.97  E-value=2.1e-29  Score=202.16  Aligned_cols=174  Identities=24%  Similarity=0.379  Sum_probs=134.7

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+++.+|+++++.++||||+++++++....  ...+....++++|++ ++
T Consensus        38 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~~~~~--~~~~~~~~~lv~e~~-~~  114 (367)
T 1cm8_A           38 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDDFTDFYLVMPFM-GT  114 (367)
T ss_dssp             --CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS--STTTCCCCEEEEECC-SE
T ss_pred             CeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCcCCCCceeeEecCC--ccccCceEEEEEecC-CC
Confidence            677887 2    233334444332  3344567889999999999999999999863211  111224569999999 77


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccC
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~  128 (188)
                      +|..+       +..+..++ .|++.||.|||+++       |+||       +||+|||++.        ..+|.+|  
T Consensus       115 ~L~~~~~~~~l~~~~~~~~~-~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y--  191 (367)
T 1cm8_A          115 DLGKLMKHEKLGEDRIQFLV-YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWY--  191 (367)
T ss_dssp             EHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGG--
T ss_pred             CHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCcCHHHEEEcCCCCEEEEeeecccccccccCcCcCCCCc--
Confidence            88776       34567777 89999999999998       6666       6999999864        4678899  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +|||++.+...++.++||||+||++++|++|++||.+.+..+++..|.+..+.|++
T Consensus       192 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~~~~  247 (367)
T 1cm8_A          192 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA  247 (367)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CCHHHHhCCCCCChhhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCH
Confidence            99999987445999999999999999999999999999999999999988887754

>3rp9_A Mitogen-activated protein kinase; structural genomics, structural genomics consortium, SGC, TR; 2.40A {Toxoplasma gondii}

Probab=99.96  E-value=1e-29  Score=209.14  Aligned_cols=174  Identities=29%  Similarity=0.455  Sum_probs=128.2

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     +++..++|.+.+.  .....+++.+|+++|++++||||++++++|...   ........+++||++. +
T Consensus        66 ~g~V~~~~~~~~~~~vaiK~i~~~~~~~~~~~~~~~E~~~l~~l~h~niv~l~~~~~~~---~~~~~~~~~lv~e~~~-~  141 (458)
T 3rp9_A           66 YGHVCEAYDKLEKRVVAIKKILRVFEDLIDCKRILREIAILNRLNHDHVVKVLDIVIPK---DVEKFDELYVVLEIAD-S  141 (458)
T ss_dssp             --CEEEEEECC--CEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS---CTTTCCCEEEEECCCS-E
T ss_pred             CeEEEEEEECCCCcEEEEEEechhhcCHHHHHHHHHHHHHHHhCCCCCCCceEEEEecC---CcccCceEEEEEeccc-c
Confidence            678887     2333444444432  344557789999999999999999999986331   2233467899999875 5


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc---------------
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH---------------  120 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~---------------  120 (188)
                      ++..+        +..++.++ .||+.||.|||+.+       |+||       +||+|||++..               
T Consensus       142 ~L~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~iiHrDlKp~NILl~~~~~~kl~DFGla~~~~~~~~~~~~~~~~~  220 (458)
T 3rp9_A          142 DFKKLFRTPVYLTELHIKTLL-YNLLVGVKYVHSAGILHRDLKPANCLVNQDCSVKVCDFGLARTVDYPENGNSQLPISP  220 (458)
T ss_dssp             EHHHHHHSSCCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTCCEEECCCTTCBCTTSCTTCCCCCC---
T ss_pred             chhhhcccCCCCCHHHHHHHH-HHHHHHHHHHHhCCcCCCCCChhhEEECCCCCEeecccccchhccCccccccccccCc
Confidence            66554        35677777 89999999999998       6676       59999998643               


Q ss_pred             -----------------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-----------CCCCCCCC
Q psy7174         121 -----------------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGE  166 (188)
Q Consensus       121 -----------------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-----------g~~pf~~~  166 (188)
                                             +||.+|  +|||++.....|+.++||||+||++|||++           |+++|.+.
T Consensus       221 ~~~~~~~~~~~~~~~~~~~~~~~~gt~~Y--~aPE~~~~~~~~~~~~DiwSlG~il~elltg~~~~~~~~~~~~p~f~g~  298 (458)
T 3rp9_A          221 REDDMNLVTFPHTKNLKRQLTGHVVTRWY--RAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVAYHADRGPLFPGS  298 (458)
T ss_dssp             ------------------------CCCTT--CCHHHHTTCCCCCTHHHHHHHHHHHHHHHTTSTTTCSSGGGCCCSCC--
T ss_pred             cccccccccccccccccccccCCcccccc--cChHHhhCCCCCCcHhHHHHHHHHHHHHHHhccccccccccccccCCCC
Confidence                                   458889  999987554559999999999999999998           77888775


Q ss_pred             C--------------------hHHHHHHHHhhcCCCCCC
Q psy7174         167 S--------------------DLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       167 ~--------------------~~~~~~~i~~~~~~p~~~  185 (188)
                      +                    ..+++..|...++.|+.+
T Consensus       299 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~i~~~~g~p~~~  337 (458)
T 3rp9_A          299 SCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEE  337 (458)
T ss_dssp             ------------------CHHHHHHHHHHHHHHCCCCHH
T ss_pred             ccccccccccccccccccccCCHHHHHHHHHHcCCCCHH
Confidence            4                    357788888888877643

>1rdq_E PKA C-alpha, CAMP-dependent protein kinase, alpha-catalytic SU; CAMP-dependent protein kinase,catalytic mechanism, ATP hydro two nucleotide states; HET: TPO SEP ADP ATP; 1.26A {Mus musculus} SCOP: d.144.1.7 PDB: 2erz_E* 3fjq_E* 1bkx_A* 1atp_E* 1fmo_E* 1j3h_A* 1jlu_E* 1bx6_A* 1re8_A* 1rej_A* 1rek_A* 2cpk_E* 2qcs_A* 2qvs_E* 1l3r_E* 3idb_A* 3idc_A* 3o7l_D* 3ow3_A* 3tnp_C* ...

Probab=99.96  E-value=1.7e-29  Score=201.60  Aligned_cols=162  Identities=16%  Similarity=0.228  Sum_probs=132.1

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   ..+..+.+.+|+++++.++||||+++++++        .++...+++|||+.+
T Consensus        54 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~g  125 (350)
T 1rdq_E           54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF--------KDNSNLYMVMEYVAG  125 (350)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CcEEEEEEECCCCCEEEEEEEEhHHhccHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EcCCEEEEEEcCCCC
Confidence            788887 2    333445554442   234456788999999999999999999976        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      ++|..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.        ..||+.|
T Consensus       126 g~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFg~a~~~~~~~~~~~gt~~y  204 (350)
T 1rdq_E          126 GEMFSHLRRIGRFSEPHARFYA-AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEA  204 (350)
T ss_dssp             CBHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGG
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccccCccceEEECCCCCEEEcccccceeccCCcccccCCccc
Confidence            999875        34566677 89999999999998       6666       5999999864        4688999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                        +|||++.+.. ++.++|+|||||++|+|++|++||.+.+..+....|...
T Consensus       205 --~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  253 (350)
T 1rdq_E          205 --LAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSG  253 (350)
T ss_dssp             --CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             --cCHHHhcCCC-CCCcCCEecccHhHhHHhhCCCCCCCCCHHHHHHHHHcC
Confidence              9999998765 899999999999999999999999998888877777654

>1tki_A Titin; serine kinase, muscle, autoinhibition; 2.00A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=6.5e-30  Score=201.62  Aligned_cols=164  Identities=17%  Similarity=0.085  Sum_probs=130.1

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    +..++|.++. .....+.+.+|+++++.++||||+++++++        .+....+++|||+.+++|
T Consensus        18 ~g~Vy~~~~~~~~~~~a~K~~~~-~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~--------~~~~~~~lv~e~~~g~~L   88 (321)
T 1tki_A           18 FGIVHRCVETSSKKTYMAKFVKV-KGTDQVLVKKEISILNIARHRNILHLHESF--------ESMEELVMIFEFISGLDI   88 (321)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECC-CTHHHHHHHHHHHHHHHSCCTTBCCEEEEE--------EETTEEEEEECCCCCCBH
T ss_pred             CeEEEEEEECCCCcEEEEEEEec-CcccHHHHHHHHHHHHhCCCCCCCeEeEEE--------ecCCEEEEEEEeCCCCCH
Confidence            688887 22    2223333332 234456688999999999999999999986        345678999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ...         +..+..++ .|++.||.|||+.+       |+|+         +||+|||++.          ..||+
T Consensus        89 ~~~l~~~~~~~~~~~~~~i~-~qi~~al~~lH~~givH~Dlkp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~  167 (321)
T 1tki_A           89 FERINTSAFELNEREIVSYV-HQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP  167 (321)
T ss_dssp             HHHHTSSSCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCG
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCCCcCCCCHHHEEEccCCCCCEEEEECCCCeECCCCCccccccCCh
Confidence            775         34566677 89999999999998       4444         6999999864          34788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      .|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.+..+.+..+......
T Consensus       168 ~y--~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  221 (321)
T 1tki_A          168 EY--YAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYT  221 (321)
T ss_dssp             GG--SCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCC
T ss_pred             hh--cCcHHhcCCC-CCchhhHHHHHHHHHHHHhCCCCCcCCCHHHHHHHHHcCCCC
Confidence            99  9999998765 899999999999999999999999998888777777655433

>3gbz_A Kinase, CMGC CDK; ssgcid, ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; 1.85A {Giardia lamblia} PDB: 3gc0_A*

Probab=99.96  E-value=1.2e-29  Score=200.41  Aligned_cols=172  Identities=27%  Similarity=0.507  Sum_probs=133.3

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.++..  .....+.+.+|++++++++||||+++++++        .++...+++|||+.+ 
T Consensus        47 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~-  117 (329)
T 3gbz_A           47 YGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRNIIELKSVI--------HHNHRLHLIFEYAEN-  117 (329)
T ss_dssp             SSEEEEEEETTTTEEEEEEECCCCC--------CHHHHHHGGGCCCTTBCCEEEEE--------EETTEEEEEEECCSE-
T ss_pred             CeEEEEEEECCCCceEEEEEEcccccccccchhHHHHHHHHHHcCCCCcceEEEEE--------ecCCEEEEEEecCCC-
Confidence            678887 2    223334444332  223345678999999999999999999986        346678999999985 


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe------------EEEecCCccc-----------
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL------------KKFVGIGIGR-----------  119 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------------lkl~dfg~~~-----------  119 (188)
                      ++..+        +..+..++ .|++.||.|||+++       |+||            +||+|||++.           
T Consensus       118 ~L~~~~~~~~~~~~~~~~~i~-~ql~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~  196 (329)
T 3gbz_A          118 DLKKYMDKNPDVSMRVIKSFL-YQLINGVNFCHSRRCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTH  196 (329)
T ss_dssp             EHHHHHHHCTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEEC-----CCEEEECCTTHHHHHC--------
T ss_pred             CHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHhCCEECCCCCHHHEEEecCCCCccceEEECcCCCccccCCcccccCC
Confidence            66654        34566677 89999999999998       5555            5899999754           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..+|..|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+.+..+.|++..||
T Consensus       197 ~~~t~~y--~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~  263 (329)
T 3gbz_A          197 EIITLWY--RPPEILLGSRHYSTSVDIWSIACIWAEMLMKTPLFPGDSEIDQLFKIFEVLGLPDDTTWP  263 (329)
T ss_dssp             ---CCTT--CCHHHHTTCCCCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             CcCCccc--cCHHHhcCCCCCCcHHHHHHHHHHHHHHHHCCCCcCCCCHHHHHHHHHHHhCCCchhhhh
Confidence            3468889  999999875558999999999999999999999999999999999999999888887775

>3cbl_A C-FES, proto-oncogene tyrosine-protein kinase FES/FPS; V-FES, fujinami, avian sarcoma, viral, feline virus, SGC; HET: STU; 1.75A {Homo sapiens} PDB: 3bkb_A* 3cd3_A* 4e93_A*

Probab=99.96  E-value=1.1e-29  Score=204.42  Aligned_cols=172  Identities=17%  Similarity=0.231  Sum_probs=134.5

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.++.. ..+..+.+.+|++++++++||||+++++++        .++...+++|||+.+|+
T Consensus       127 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~~g~  198 (377)
T 3cbl_A          127 FGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGVC--------TQKQPIYIVMELVQGGD  198 (377)
T ss_dssp             TEEEEEEEETTTCCEEEEEECCTTSCHHHHTTTTHHHHHHTTCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCB
T ss_pred             CCeEEEEEEecCCeEEEEEEccccCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--------ecCCCcEEEEEcCCCCC
Confidence            678887 2    233334444432 334456788999999999999999999986        44567899999999999


Q ss_pred             HHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cc
Q psy7174          79 KARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VC  122 (188)
Q Consensus        79 l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~  122 (188)
                      |..+.         ..+..++ .|++.||.|||+++       |+|+       +||+|||++..             .+
T Consensus       199 L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivHrDlkp~Nil~~~~~~~kl~DfG~s~~~~~~~~~~~~~~~~~  277 (377)
T 3cbl_A          199 FLTFLRTEGARLRVKTLLQMV-GDAAAGMEYLESKCCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV  277 (377)
T ss_dssp             HHHHHHHHGGGCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECTTSEEECCSSCCEE
T ss_pred             HHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCcCCcccCHHHEEEcCCCcEEECcCCCceecCCCceeecCCCCCC
Confidence            98762         3455566 79999999999998       5566       59999998652             12


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +..|  +|||++.... ++.++|||||||++||+++ |..||.+.+..+....+......|.|..+|
T Consensus       278 ~~~y--~aPE~~~~~~-~~~~~DvwslG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  341 (377)
T 3cbl_A          278 PVKW--TAPEALNYGR-YSSESDVWSFGILLWETFSLGASPYPNLSNQQTREFVEKGGRLPCPELCP  341 (377)
T ss_dssp             EGGG--SCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCSSTTSCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             CcCc--CCHhHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            4468  9999998755 8999999999999999998 999999988887777777766666666654

>1xjd_A Protein kinase C, theta type; PKC-theta, ATP, AMP,, transferase; HET: TPO SEP STU; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 2jed_A*

Probab=99.96  E-value=2.3e-29  Score=200.55  Aligned_cols=162  Identities=17%  Similarity=0.231  Sum_probs=130.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++..++|.+++.   ..+..+...+|.++++.+ +||||+++++++        .+....+++|||+.
T Consensus        30 fg~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~il~~~~~hp~iv~l~~~~--------~~~~~~~lv~E~~~  101 (345)
T 1xjd_A           30 FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF--------QTKENLFFVMEYLN  101 (345)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE--------ECSSEEEEEEECCT
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhHHhhhhhhHHHHHHHHHHHHhcCCCCCCCcEEEEE--------EeCCEEEEEEeCCC
Confidence            788887 2    333445555442   233456788999999876 899999999976        45678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.           ..|
T Consensus       102 gg~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~g  180 (345)
T 1xjd_A          102 GGDLMYHIQSCHKFDLSRATFYA-AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCG  180 (345)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCS
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeCCCChhhEEECCCCCEEEeEChhhhhcccCCCcccCCCC
Confidence            9999876        34466677 89999999999998       6666       5999999754           357


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+.|  +|||++.+.. ++.++|+||+||++|||++|++||.+.+..+....|...
T Consensus       181 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~~  233 (345)
T 1xjd_A          181 TPDY--IAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD  233 (345)
T ss_dssp             CGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             Cccc--CChhhhcCCC-CCChhhhHHHHHHHHHHhcCCCCCCCCCHHHHHHHHHhC
Confidence            8899  9999998765 899999999999999999999999998888777777543

>4aw2_A Serine/threonine-protein kinase MRCK alpha; transferase, CDC42BPA; HET: 22E; 1.70A {Rattus norvegicus} PDB: 3tku_A* 3qfv_A*

Probab=99.96  E-value=9.6e-30  Score=208.46  Aligned_cols=162  Identities=15%  Similarity=0.143  Sum_probs=130.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   .....+.+.+|+.+++.++||||++++++|        .++...++||||+.+
T Consensus        87 fG~V~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~--------~~~~~~~lV~Ey~~g  158 (437)
T 4aw2_A           87 FGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHYAF--------QDDNNLYLVMDYYVG  158 (437)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEHHHHHHTTTTCCHHHHHHHHHHSCTTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CEEEEEEEEcCCCcEEEEEEEEHHHhhhHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--------eeCCEEEEEEecCCC
Confidence            788887 2    233345544442   223344588999999999999999999986        456788999999999


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cc
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HV  121 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~  121 (188)
                      |+|..+         +..++.++ .|++.||.|||+.+       |+||       +||+|||++.            .+
T Consensus       159 g~L~~~l~~~~~~l~e~~~~~~~-~qi~~aL~~LH~~giiHrDLKp~NILl~~~g~vkL~DFGla~~~~~~~~~~~~~~~  237 (437)
T 4aw2_A          159 GDLLTLLSKFEDRLPEEMARFYL-AEMVIAIDSVHQLHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV  237 (437)
T ss_dssp             CBHHHHHHTTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECCSCC
T ss_pred             CcHHHHHHHccCCCCHHHHHHHH-HHHHHHHHHHHhCCeEecccCHHHeeEcCCCCEEEcchhhhhhcccCCCccccccc
Confidence            999876         34566777 89999999999998       6677       5999999753            46


Q ss_pred             ccccccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||+.|  +|||++..    ...|+.++||||+||++|||++|++||.+.+..+...+|..
T Consensus       238 GT~~Y--~APE~l~~~~~~~~~~~~~~DvwSlGvil~elltG~~Pf~~~~~~~~~~~i~~  295 (437)
T 4aw2_A          238 GTPDY--ISPEILQAMEGGKGRYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMN  295 (437)
T ss_dssp             SCGGG--CCHHHHHHHHTSCCEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             CCcCe--eChHHHhhcccCCCCCCCcCeeHHHHHHHHHHHhCCCCCCCCChhHHHHhhhh
Confidence            89999  99999862    23489999999999999999999999999999888888865

>1ua2_A CAK, cell division protein kinase 7; cell cycle, phosphorylation, protein-protein interaction, PR kinase, cell cycle, transferase; HET: TPO ATP; 3.02A {Homo sapiens} SCOP: d.144.1.7

Probab=99.96  E-value=2.8e-29  Score=199.62  Aligned_cols=172  Identities=41%  Similarity=0.664  Sum_probs=135.4

Q ss_pred             cccccc-c----CCccccccccccc-----hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD-----VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~-----~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.+....     ....+.+.+|++++++++||||+++++++        .+....++++||+
T Consensus        23 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~   94 (346)
T 1ua2_A           23 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF--------GHKSNISLVFDFM   94 (346)
T ss_dssp             TEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE--------CCTTCCEEEEECC
T ss_pred             CEEEEEEEECCCCcEEEEEEEecCCcchhhhhhhHHHHHHHHHHhhCCCCCCCeEEEEE--------eeCCceEEEEEcC
Confidence            678887 2    2333344443321     11235688999999999999999999986        4466789999999


Q ss_pred             ccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------c
Q psy7174          75 TKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------H  120 (188)
Q Consensus        75 ~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~  120 (188)
                      .+ ++..+         ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           .
T Consensus        95 ~~-~l~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  172 (346)
T 1ua2_A           95 ET-DLEVIIKDNSLVLTPSHIKAYM-LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ  172 (346)
T ss_dssp             SE-EHHHHHTTCCSSCCSSHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCS
T ss_pred             CC-CHHHHHHhcCcCCCHHHHHHHH-HHHHHHHHHHHHCCEECCCCCHHHEEEcCCCCEEEEecccceeccCCcccCCcc
Confidence            87 55443         23466677 89999999999998       6666       5999999754           3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .+|+.|  +|||++.+...++.++||||+||++|+|++|.+||.+.+..+.+.++.+..+.|.+..||
T Consensus       173 ~~t~~y--~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  238 (346)
T 1ua2_A          173 VVTRWY--RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  238 (346)
T ss_dssp             CCCCTT--CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             cccccc--cCchHhhCCCCCCchhhhHhHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHcCCCChhhhh
Confidence            567889  999999765558999999999999999999999999999999999999999998888875

>3rgf_A Cyclin-dependent kinase 8; protein kinase complex, transferase,transcription; HET: BAX; 2.20A {Homo sapiens}

Probab=99.96  E-value=3.6e-29  Score=202.91  Aligned_cols=175  Identities=28%  Similarity=0.477  Sum_probs=132.7

Q ss_pred             cccccc-cCC---cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSK---WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~---~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..+   ....+|+|.. .....+.+.+|+++|++++||||++++++|..      ..+...++++||+.++.+
T Consensus        34 ~g~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~------~~~~~~~lv~e~~~~~l~  107 (405)
T 3rgf_A           34 YGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVFLS------HADRKVWLLFDYAEHDLW  107 (405)
T ss_dssp             --EEEEEEESSSSCCCCEEEEECSSSSCCHHHHHHHHHHHHCCCTTBCCCCEEEEE------TTTTEEEEEEECCSEEHH
T ss_pred             CeEEEEEEEccCCCCeEEEEEEECCCCCCHHHHHHHHHHHhcCCCCeeeEeeEEec------CCCCeEEEEEeCCCCCHH
Confidence            677887 211   2224555553 22334678899999999999999999998632      345678999999986544


Q ss_pred             HHH----------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc------
Q psy7174          80 ARF----------------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR------  119 (188)
Q Consensus        80 ~~~----------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~------  119 (188)
                      ..+                +..+..++ .|++.||.|||+.+       |+||           +||+|||++.      
T Consensus       108 ~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~al~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~  186 (405)
T 3rgf_A          108 HIIKFHRASKANKKPVQLPRGMVKSLL-YQILDGIHYLHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPL  186 (405)
T ss_dssp             HHHHHHHHHC-------CCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECCSSTTTTCEEECCTTCCC------
T ss_pred             HHHHHhccccccccccCCCHHHHHHHH-HHHHHHHHHHHhCCEeCCCcCHHHeEEecCCCCCCcEEEEECCCceecCCCC
Confidence            332                12355667 89999999999988       5555           5999999864      


Q ss_pred             --------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh---------HHHHHHHHhhcCCC
Q psy7174         120 --------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD---------LDQLTRIFQTLGTP  182 (188)
Q Consensus       120 --------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~---------~~~~~~i~~~~~~p  182 (188)
                              ..||..|  +|||++.+...++.++||||+||++|+|++|++||.+.+.         .+++.+|...++.|
T Consensus       187 ~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~~~~~~~l~~i~~~~g~p  264 (405)
T 3rgf_A          187 KPLADLDPVVVTFWY--RAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLDRIFNVMGFP  264 (405)
T ss_dssp             ----------CCCTT--CCHHHHTTCCSCCHHHHHHHHHHHHHHHHHSSCTTCCCC------CCCCHHHHHHHHHHHCCC
T ss_pred             cccccCCCceecCcc--cCchhhcCCCcccchhhhHHHHHHHHHHHhCCCCCCCccccccccccchHHHHHHHHHhhCCC
Confidence                    3568889  9999998755589999999999999999999999977654         57889999999999


Q ss_pred             CCCCCC
Q psy7174         183 SEDTWP  188 (188)
Q Consensus       183 ~~~~~p  188 (188)
                      ++..|+
T Consensus       265 ~~~~~~  270 (405)
T 3rgf_A          265 ADKDWE  270 (405)
T ss_dssp             CTTTCG
T ss_pred             Chhhcc
Confidence            988884

>2y0a_A Death-associated protein kinase 1; transferase, calmodulin, esprit; HET: MES; 2.60A {Homo sapiens}

Probab=99.96  E-value=2.9e-29  Score=198.18  Aligned_cols=161  Identities=17%  Similarity=0.208  Sum_probs=129.0

Q ss_pred             cccccc-c----CCccccccccccch------hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDV------NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~------~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .    ++..++|.+.+...      ...+.+.+|++++++++||||+++++++        .++...++++||
T Consensus        24 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~   95 (326)
T 2y0a_A           24 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY--------ENKTDVILILEL   95 (326)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCCSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEEC
T ss_pred             CeEEEEEEECCCCcEEEEEEEEccccccccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE--------EeCCEEEEEEEc
Confidence            678887 2    33444555554211      1356789999999999999999999986        446678999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc--------
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR--------  119 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~--------  119 (188)
                      +.+++|..+        +..+..++ .|++.||.|||+.+       |+||           +||+|||++.        
T Consensus        96 ~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~kl~Dfg~a~~~~~~~~~  174 (326)
T 2y0a_A           96 VAGGELFDFLAEKESLTEEEATEFL-KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF  174 (326)
T ss_dssp             CCSCBHHHHHTTSSCCBHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESCSSSSSCCEEECCCTTCEECCTTSCC
T ss_pred             CCCCCHHHHHHhcCCcCHHHHHHHH-HHHHHHHHHHHHCCeEcCCCCHHHEEEecCCCCCCCEEEEECCCCeECCCCCcc
Confidence            999999886        34566777 89999999999988       5554           5999999754        


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        ..||+.|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.+..+.+..+..
T Consensus       175 ~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~~~~  231 (326)
T 2y0a_A          175 KNIFGTPEF--VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSA  231 (326)
T ss_dssp             CCCCSCTTT--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHH
T ss_pred             ccccCCcCc--CCceeecCCC-CCcHHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHh
Confidence              3578899  9999997755 89999999999999999999999998877766666544

>2fst_X Mitogen-activated protein kinase 14; active mutants, lipids, MAP kinase insertion, autophosphorylation, transferase; HET: BOG; 1.45A {Homo sapiens} PDB: 2fso_X* 2fsl_X* 2fsm_X* 2npq_A* 2bal_A* 2baj_A* 2bak_A* 2baq_A* 2qd9_A* 1ian_A* 2rg5_A* 2rg6_A* 3bv2_A* 3bv3_A* 3bx5_A* 3c5u_A* 3cg2_A* 3l8x_A* 3mvl_A* 3mvm_A* ...

Probab=99.96  E-value=1.4e-29  Score=203.22  Aligned_cols=174  Identities=25%  Similarity=0.419  Sum_probs=129.0

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|+++++.++||||+++++++....  ........++++|++ ++
T Consensus        42 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~~~--~~~~~~~~~lv~e~~-~~  118 (367)
T 2fst_X           42 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPAR--SLEEFNDVYLVTHLM-GA  118 (367)
T ss_dssp             -CCEEEEEETTTTEEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS--SGGGCCCCEEEEECC-CE
T ss_pred             CeEEEEEEECCCCCEEEEEEeCccccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEEecCC--ccccCCeEEEEeccc-CC
Confidence            678887 2    223334444332  3345567889999999999999999999863211  112235679999998 56


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccC
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~  128 (188)
                      +|..+       ...+..++ .|++.||.|||+.+       |+||       +||+|||++.        ..+|.+|  
T Consensus       119 ~L~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~t~~y--  195 (367)
T 2fst_X          119 DLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWY--  195 (367)
T ss_dssp             ECC-----CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECC---------------CCCTT--
T ss_pred             CHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCCHhhEEECCCCCEEEeeccccccccccCCCcCcCcCc--
Confidence            76654       34566777 89999999999998       6666       5999999864        4678999  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +|||++.+...++.++||||+||++|+|++|++||.+.+..+++..|.+.++.|++
T Consensus       196 ~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~  251 (367)
T 2fst_X          196 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA  251 (367)
T ss_dssp             CCHHHHTTCCSCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCCH
T ss_pred             cChHHHcCCcCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence            99999987455899999999999999999999999999999999999998887754

>1j1b_A Glycogen synthase kinase-3 beta; complex, TAU, AMPPNP, transferase; HET: ANP; 1.80A {Homo sapiens} SCOP: d.144.1.7 PDB: 1i09_A* 1j1c_A* 2jld_A* 3m1s_A* 3pup_A* 3du8_A* 1pyx_A* 1q41_A* 1q3w_A* 1q3d_A* 1q4l_A* 3q3b_A* 1q5k_A* 3i4b_A* 3l1s_A* 1r0e_A* 3zrk_A* 3zrl_A* 3zrm_A* 4dit_A* ...

Probab=99.96  E-value=6.9e-30  Score=208.29  Aligned_cols=174  Identities=27%  Similarity=0.401  Sum_probs=130.5

Q ss_pred             cccccc-cCCc-cccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+ ..+. ...+++|+... ......+|+++|++++||||++++++|+...  ...+....++++||+.++.....
T Consensus        67 fg~Vy~~~~~~~~~~vaiK~~~~-~~~~~~~E~~il~~l~hpniv~l~~~~~~~~--~~~~~~~~~lv~e~~~~~l~~~~  143 (420)
T 1j1b_A           67 FGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSG--EKKDEVYLNLVLDYVPETVYRVA  143 (420)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEC-CTTSCCHHHHHHHTCCCTTBCCEEEEEEEEE--TTTTEEEEEEEEECCCEEHHHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEecc-cchhHHHHHHHHHHcCCCCccceeeEEeccC--CCCcceeEEeehhcccccHHHHH
Confidence            788887 2222 12444444311 1233458999999999999999999875421  11223456799999987544332


Q ss_pred             -----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------ccccccc
Q psy7174          83 -----------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYC  126 (188)
Q Consensus        83 -----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y  126 (188)
                                 ...+..++ .|++.||.|||+++       |+||        +||+|||++.          ..+|..|
T Consensus       144 ~~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~t~~y  222 (420)
T 1j1b_A          144 RHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY  222 (420)
T ss_dssp             HHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHTTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCTTS
T ss_pred             HHHhhccCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCChhhEEEeCCCCeEEeccchhhhhcccCCCceeeeeCCCc
Confidence                       23456667 89999999999998       5555        6999999864          4578899


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                        +|||++.+...|+.++||||+||++|||++|++||.+.+..+++.+|.+.++.|..
T Consensus       223 --~aPE~~~~~~~~~~~~DiwSlG~il~ell~G~~pf~~~~~~~~l~~i~~~lg~p~~  278 (420)
T 1j1b_A          223 --RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR  278 (420)
T ss_dssp             --CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred             --CCHHHHcCCCCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence              99999976545999999999999999999999999999999999999888777653

>3a62_A Ribosomal protein S6 kinase beta-1; kinase domain, inactive, active, ribosomal S6 kinase, activation, alternative initiation, ATP-binding; HET: TPO STU; 2.35A {Homo sapiens} PDB: 3a61_A* 3a60_A*

Probab=99.96  E-value=9.9e-29  Score=195.17  Aligned_cols=162  Identities=18%  Similarity=0.267  Sum_probs=123.9

Q ss_pred             cccccc--------cCCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ--------QSKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~--------~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+        .++..++|.+++.    .......+.+|+++++.++||||+++++++        ..+...+++||
T Consensus        30 ~g~V~~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e  101 (327)
T 3a62_A           30 YGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIVDLIYAF--------QTGGKLYLILE  101 (327)
T ss_dssp             TEEEEEEEECSSTTTTCEEEEEEECCC--------------HHHHHHHCCCTTBCCEEEEE--------ECSSCEEEEEE
T ss_pred             CEEEEEEEEeccCCCCcEEEEEEEEHHHhhhhhhHHHHHHHHHHHHHhCCCCCccceeEEE--------EcCCEEEEEEe
Confidence            678885        1223335544442    123445678999999999999999999986        44678899999


Q ss_pred             ccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          73 IFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        73 ~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      |+.+++|..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.           
T Consensus       102 ~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~al~~lH~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~~~~~~~~~~~~~~  180 (327)
T 3a62_A          102 YLSGGELFMQLEREGIFMEDTACFYL-AEISMALGHLHQKGIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHT  180 (327)
T ss_dssp             CCTTEEHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCTTTEEECTTSCEEECCCSCC----------CT
T ss_pred             CCCCCcHHHHHHhCCCCCHHHHHHHH-HHHHHHHHHHHhCCEEcccCCHHHeEECCCCcEEEEeCCcccccccCCccccc
Confidence            9999999775        23456666 79999999999998       7777       5999999753           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ..||..|  +|||++.+.. ++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus       181 ~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  236 (327)
T 3a62_A          181 FCGTIEY--MAPEILMRSG-HNRAVDWWSLGALMYDMLTGAPPFTGENRKKTIDKILKC  236 (327)
T ss_dssp             TSSCCTT--SCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHT
T ss_pred             cCCCcCc--cCHhhCcCCC-CCCcccchhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            3578899  9999998765 899999999999999999999999998888777777654

>2i0e_A Protein kinase C-beta II; serine/threonine protein kinase, transferase; HET: TPO SEP PDS; 2.60A {Homo sapiens} PDB: 3iw4_A*

Probab=99.96  E-value=4.2e-29  Score=199.55  Aligned_cols=162  Identities=18%  Similarity=0.168  Sum_probs=130.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++..++|.+++.   ..+..+.+.+|.++++.+ +||||+++++++        .+....+++|||+.
T Consensus        33 fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~--------~~~~~~~lv~E~~~  104 (353)
T 2i0e_A           33 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF--------QTMDRLYFVMEYVN  104 (353)
T ss_dssp             TEEEEEEEETTEEEEEEEEEEEHHHHHHTTCHHHHHHHHHHHTCTTCCTTBCCEEEEE--------ECSSEEEEEEECCC
T ss_pred             CEEEEEEEECCCCCEEEEEEEEHHHhhcchHHHHHHHHHHHHHhcCCCCEEeeEEEEE--------EcCCEEEEEEeCCC
Confidence            788887 2    233445555442   224456788999999988 799999999976        45678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.           ..|
T Consensus       105 gg~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~~g  183 (353)
T 2i0e_A          105 GGDLMYHIQQVGRFKEPHAVFYA-AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCG  183 (353)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCS
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCEEeccCCHHHEEEcCCCcEEEEeCCcccccccCCcccccccC
Confidence            9999875        34566677 89999999999998       6666       5999999754           457


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+.|  +|||++.+.. ++.++|+|||||++|||++|++||.+.+..+....|...
T Consensus       184 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~  236 (353)
T 2i0e_A          184 TPDY--IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH  236 (353)
T ss_dssp             CGGG--CCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             Cccc--cChhhhcCCC-cCCcccccchHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Confidence            8899  9999998765 899999999999999999999999998887777777653

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.96  E-value=5.1e-29  Score=204.96  Aligned_cols=170  Identities=17%  Similarity=0.251  Sum_probs=135.2

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   +...++|.++.. ....+.+.+|++++++++||||+++++++         .+...+++|||+.+|+|.
T Consensus       201 fg~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~iv~l~~~~---------~~~~~~lv~e~~~~g~L~  270 (454)
T 1qcf_A          201 FGEVWMATYNKHTKVAVKTMKPG-SMSVEAFLAEANVMKTLQHDKLVKLHAVV---------TKEPIYIITEFMAKGSLL  270 (454)
T ss_dssp             SEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHTTCCCTTBCCEEEEE---------CSSSCEEEECCCTTCBHH
T ss_pred             ceEEEEEEECCccEEEEEEecCC-CccHHHHHHHHHHHhhCCCCCEeeEEEEE---------eCCccEEEEeecCCCcHH
Confidence            788887 2   222334444432 23467899999999999999999999985         245689999999999998


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      .+.          ..+..++ .|++.||.|||+++       |+||       +||+|||++..            .++.
T Consensus       271 ~~l~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~  349 (454)
T 1qcf_A          271 DFLKSDEGSKQPLPKLIDFS-AQIAEGMAFIEQRNYIHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI  349 (454)
T ss_dssp             HHHHSHHHHTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSSCSGGGEEECTTCCEEECSTTGGGGBCCHHHHTTCSSSSCG
T ss_pred             HHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHhCCccCCCCCHHHEEECCCCcEEEeeCCCceEcCCCceeccCCCcccc
Confidence            863          2344566 79999999999998       5666       59999998653            2345


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.... ++.++|||||||++|||++ |+.||.+.+..+....+.+....|.|..+|
T Consensus       350 ~y--~aPE~~~~~~-~~~~~DvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~  411 (454)
T 1qcf_A          350 KW--TAPEAINFGS-FTIKSDVWSFGILLMEIVTYGRIPYPGMSNPEVIRALERGYRMPRPENCP  411 (454)
T ss_dssp             GG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCTTSC
T ss_pred             cc--cCHHHhccCC-CCcHHHHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            68  9999998755 9999999999999999999 999999999888888888877777776665

>2vd5_A DMPK protein; serine/threonine-protein kinase, kinase, transferase, ATP-BI nucleotide-binding, cardiac contractility, muscle different; HET: BI8; 2.80A {Homo sapiens}

Probab=99.96  E-value=2.5e-29  Score=204.61  Aligned_cols=162  Identities=15%  Similarity=0.149  Sum_probs=131.0

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   .....+.+.+|++++..++||||++++++|        .++...+++|||+.+
T Consensus        74 fG~V~~~~~~~~~~~vAiK~l~k~~~~~~~~~~~~~~E~~il~~~~hp~Iv~l~~~~--------~~~~~~~lVmE~~~g  145 (412)
T 2vd5_A           74 FSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQLHFAF--------QDENYLYLVMEYYVG  145 (412)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHHGGGCCHHHHHHHHHHSCTTTBCCEEEEE--------ECSSEEEEEECCCCS
T ss_pred             CeEEEEEEECCCCCEEEEEEEeHHHhhhHHHHHHHHHHHHHHHhcCCCCeeeEEEEE--------eeCCEEEEEEcCCCC
Confidence            788887 2    334445555442   223445688999999999999999999976        456788999999999


Q ss_pred             ccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cc
Q psy7174          77 TTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HV  121 (188)
Q Consensus        77 ~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~  121 (188)
                      |+|..+.         ..++.++ .|++.||+|||+.+       |+||       +||+|||++.            .+
T Consensus       146 g~L~~~l~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~giiHrDLKp~NILld~~g~vkL~DFGla~~~~~~~~~~~~~~~  224 (412)
T 2vd5_A          146 GDLLTLLSKFGERIPAEMARFYL-AEIVMAIDSVHRLGYVHRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAV  224 (412)
T ss_dssp             CBHHHHHHHHSSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTSCEECSSCC
T ss_pred             CcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecccCHHHeeecCCCCEEEeechhheeccCCCccccceec
Confidence            9998763         3456677 79999999999998       6676       5999999753            36


Q ss_pred             ccccccCCCCccccc------cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFG------ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||+.|  +|||++..      ...|+.++|+||+||++|||++|++||.+.+..+...+|..
T Consensus       225 Gt~~Y--~APE~l~~~~~~~~~~~~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~  284 (412)
T 2vd5_A          225 GTPDY--LSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAETYGKIVH  284 (412)
T ss_dssp             SCGGG--CCHHHHHHHHTCTTCSEECTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHT
T ss_pred             cccCc--CCHHHHhhcccCcCCCCCChHHhhhHHhHHHHHHHhCCCCCCCCCHHHHHHHHHh
Confidence            89999  99999873      23489999999999999999999999999998888888864

>3kul_A Ephrin type-A receptor 8; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase; HET: PTR; 2.15A {Homo sapiens}

Probab=99.96  E-value=5.9e-29  Score=196.30  Aligned_cols=172  Identities=15%  Similarity=0.149  Sum_probs=135.1

Q ss_pred             cccccc-cC----Cc---ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QS----KW---SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~----~~---~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..    +.   .++|.++.. .....+.+.+|++++++++||||+++++++        .++...+++|||+.
T Consensus        62 ~g~V~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~  133 (325)
T 3kul_A           62 SGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLEGVV--------TRGRLAMIVTEYME  133 (325)
T ss_dssp             TEEEEEEEECCTTSCCEEEEEEEECTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------CGGGCCEEEEECCT
T ss_pred             CcEEEEEEEecCCCCCceEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EeCCccEEEeeCCC
Confidence            677876 21    22   334444432 445567789999999999999999999986        44667899999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------  120 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------  120 (188)
                      +++|..+.         ..+..++ .|++.||.|||+.+       |+||       +||+|||++..            
T Consensus       134 ~~~L~~~l~~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  212 (325)
T 3kul_A          134 NGSLDTFLRTHDGQFTIMQLVGML-RGVGAGMRYLSDLGYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTT  212 (325)
T ss_dssp             TCBHHHHHHTTTTCSCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCSSCEECC----CCEECC
T ss_pred             CCcHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHCCeeCCCCCcceEEECCCCCEEECCCCcccccccCccceeecc
Confidence            99998763         3466667 79999999999998       6666       59999998652            


Q ss_pred             --cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 --VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 --~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                        .+|..|  +|||++.+.. ++.++||||+||++|++++ |..||.+.+..+....+......|.+..+|
T Consensus       213 ~~~~t~~y--~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (325)
T 3kul_A          213 GGKIPIRW--TAPEAIAFRT-FSSASDVWSFGVVMWEVLAYGERPYWNMTNRDVISSVEEGYRLPAPMGCP  280 (325)
T ss_dssp             ---CCGGG--SCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             CCCCcccc--cCHhHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHHcCCCCCCCCCcC
Confidence              234469  9999998755 8999999999999999998 999999988888888887776666655543

>4dc2_A Protein kinase C IOTA type; kinase, substrate, cell polarity, atypical PKC, trans transferase substrate complex; HET: TPO ADE; 2.40A {Mus musculus}

Probab=99.96  E-value=5.7e-29  Score=201.55  Aligned_cols=149  Identities=17%  Similarity=0.185  Sum_probs=120.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|..+++++ +||||++++++|        .++...+++|||+.
T Consensus        65 fG~V~~~~~~~~~~~~AvK~~~k~~~~~~~~~~~~~~E~~il~~~~~hp~Iv~l~~~~--------~~~~~~~lV~E~~~  136 (396)
T 4dc2_A           65 YAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF--------QTESRLFFVIEYVN  136 (396)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEGGGTC----CCHHHHHHHHHHHHTTCTTBCCEEEEE--------ECSSEEEEEEECCT
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhcCCCCCcCeeEEEE--------EECCEEEEEEEcCC
Confidence            788887     2334456655553   233456688999999887 799999999986        45678999999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|...        +..++.++ .|++.||.|||+++       |+||       +||+|||++.           .+|
T Consensus       137 gg~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~LH~~givHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~g  215 (396)
T 4dc2_A          137 GGDLMFHMQRQRKLPEEHARFYS-AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG  215 (396)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCB
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCEEeccCCHHHEEECCCCCEEEeecceeeecccCCCccccccC
Confidence            9999765        34567777 89999999999998       6676       5999999854           468


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      |+.|  +|||++.+.. |+.++|+||+||++|||++|++||.+
T Consensus       216 t~~Y--~aPE~l~~~~-~~~~~DiwslGvllyell~G~~Pf~~  255 (396)
T 4dc2_A          216 TPNY--IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDI  255 (396)
T ss_dssp             CGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSTT
T ss_pred             Cccc--CCchhhcCCC-CChHHHHHHHHHHHHHHHhCCCCCcc
Confidence            8999  9999998865 99999999999999999999999964

>3lij_A Calcium/calmodulin dependent protein kinase with A kinase domain and 4 calmodulin...; transferase, calcium dependent protein kinase; HET: ANP; 1.90A {Cryptosporidium parvum} PDB: 3hzt_A* 3dxn_A 3l19_A*

Probab=99.96  E-value=5.4e-29  Score=206.73  Aligned_cols=168  Identities=20%  Similarity=0.249  Sum_probs=130.9

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     +++..++|.+.+.  .....+.+.+|+++++.++||||++++++|        .+....+++|||+.+|
T Consensus        50 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~~g  121 (494)
T 3lij_A           50 YGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDFF--------EDKRNYYLVMECYKGG  121 (494)
T ss_dssp             --EEEEEEETTTCCEEEEEEEEC-----CTTHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCCSC
T ss_pred             CEEEEEEEECCCCcEEEEEEEeccccCchHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EeCCEEEEEEecCCCC
Confidence            678886     2233445555443  344567789999999999999999999986        4466789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~  122 (188)
                      +|...        +..+..++ +|++.||.|||+++       |+||          +||+|||++.          ..|
T Consensus       122 ~L~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~DfG~a~~~~~~~~~~~~~g  200 (494)
T 3lij_A          122 ELFDEIIHRMKFNEVDAAVII-KQVLSGVTYLHKHNIVHRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLG  200 (494)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEECBTTBCBCCCCS
T ss_pred             cHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCceeccCChhhEEEeCCCCCCcEEEEECCCCeECCCCccccccCC
Confidence            98764        34466677 89999999999998       5555          6999999754          458


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      |+.|  +|||++.. . |+.++||||+||++|+|++|.+||.+.+..+.+..+......++..
T Consensus       201 t~~y--~aPE~l~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~~  259 (494)
T 3lij_A          201 TAYY--IAPEVLRK-K-YDEKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSP  259 (494)
T ss_dssp             CTTT--CCHHHHTT-C-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCSG
T ss_pred             CcCe--eCHHHHcc-c-CCCchhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCch
Confidence            8999  99999864 3 8999999999999999999999999998888887776654444433

>3s95_A LIMK-1, LIM domain kinase 1; structural genomics, structural genomics consortium, SGC, PR kinase, transferase-antibiotic complex; HET: STU GOL; 1.65A {Homo sapiens}

Probab=99.96  E-value=5.1e-29  Score=194.96  Aligned_cols=149  Identities=18%  Similarity=0.260  Sum_probs=121.6

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+.+......+.+.+|++++++++||||+++++++        .++...++++||+.+++|
T Consensus        23 ~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~L   94 (310)
T 3s95_A           23 FGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVL--------YKDKRLNFITEYIKGGTL   94 (310)
T ss_dssp             SEEEEEEEETTTCCEEEEEEESCCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------EETTEEEEEEECCTTCBH
T ss_pred             CEEEEEEEECCCCcEEEEEEeccCCHHHHHHHHHHHHHHHhCCCcCcccEEEEE--------ecCCeeEEEEEecCCCcH
Confidence            678887 2    223334444444566678899999999999999999999986        345678999999999999


Q ss_pred             HHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------------
Q psy7174          80 ARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------------  119 (188)
Q Consensus        80 ~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------------  119 (188)
                      ..+.         ..+..++ .|++.||.|||+.+       |+||       +||+|||++.                 
T Consensus        95 ~~~l~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  173 (310)
T 3s95_A           95 RGIIKSMDSQYPWSQRVSFA-KDIASGMAYLHSMNIIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK  173 (310)
T ss_dssp             HHHHHHCCTTSCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSTTSEEECTTSCEEECCCTTCEECC--------------
T ss_pred             HHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhCCccCCCCCcCeEEECCCCCEEEeecccceecccccccccccccccc
Confidence            8863         3455666 79999999999998       7777       5999999863                 


Q ss_pred             --------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         120 --------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       120 --------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                              ..||..|  +|||++.+.. ++.++||||+|+++|++++|..|+..
T Consensus       174 ~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~~l~el~~g~~~~~~  224 (310)
T 3s95_A          174 PDRKKRYTVVGNPYW--MAPEMINGRS-YDEKVDVFSFGIVLCEIIGRVNADPD  224 (310)
T ss_dssp             ------CCCCSCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHTCCSSTT
T ss_pred             cccccccccCCCcce--eCHHHhcCCC-CCcHHHHHHHHHHHHHHhcCCCCCcc
Confidence                    3578889  9999998765 89999999999999999999998864

>4fr4_A YANK1, serine/threonine-protein kinase 32A; structural genomics, structural genomics consortium, SGC, TR; HET: STU; 2.29A {Homo sapiens}

Probab=99.96  E-value=1.2e-28  Score=198.92  Aligned_cols=151  Identities=15%  Similarity=0.122  Sum_probs=121.2

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||.     +++..++|.+.+.   .....+.+.+|+++++.++||||++++++|        .+....++++||+.+
T Consensus        28 fG~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--------~~~~~~~lv~e~~~g   99 (384)
T 4fr4_A           28 FGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNLWYSF--------QDEEDMFMVVDLLLG   99 (384)
T ss_dssp             TCCEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcccHHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EeCCEEEEEEecCCC
Confidence            788887     2233445544442   233456788999999999999999999986        456688999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      |+|..+        +..+..++ .|++.||.|||+.+       |+||       +||+|||++.          ..||+
T Consensus       100 g~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~LH~~givHrDlkp~NIll~~~g~vkL~DFG~a~~~~~~~~~~~~~gt~  178 (384)
T 4fr4_A          100 GDLRYHLQQNVHFKEETVKLFI-CELVMALDYLQNQRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITTMAGTK  178 (384)
T ss_dssp             EEHHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCCCCSCG
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCceeccCcHHHeEECCCCCEEEeccceeeeccCCCceeccCCCc
Confidence            999875        34567777 89999999999998       6666       5999999754          46889


Q ss_pred             cccCCCCcccccc--CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         125 YCTRGAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       125 ~y~~~aPe~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      .|  +|||++...  ..|+.++|||||||++|+|++|++||.+.
T Consensus       179 ~Y--~aPE~~~~~~~~~~~~~~DiwSlG~il~elltG~~Pf~~~  220 (384)
T 4fr4_A          179 PY--MAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIR  220 (384)
T ss_dssp             GG--CCGGGTCCCSSCCBCTTHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             cc--cCCeeeccCCCCCCCccceeechHHHHHHHHhCCCCCCCC
Confidence            99  999998642  24889999999999999999999999753

>3g33_A Cell division protein kinase 4; Ser/Thr protein kinase, cell cycle, phosphorylation, ATP-BIN cell division, disease mutation, kinase; 3.00A {Homo sapiens}

Probab=99.96  E-value=7.5e-29  Score=193.81  Aligned_cols=176  Identities=27%  Similarity=0.499  Sum_probs=135.9

Q ss_pred             cccccc-cC----Ccccccccccc-----chhhhhHHHHHHHHHHhCC---CCCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-----DVNVETQAKAEGKQDRRLD---YANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-----~~~~~~~~~~E~~il~~l~---h~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||+ .+    +..++|.+...     .........+|++++++++   ||||++++++|...   ........++++
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~niv~~~~~~~~~---~~~~~~~~~lv~   98 (308)
T 3g33_A           22 YGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLEAFEHPNVVRLMDVCATS---RTDREIKVTLVF   98 (308)
T ss_dssp             SCCEEEEECTTTCCEEEEEEEEEECCCTTSSCCCHHHHHHHHHHHHHHHHCCTTBCCEEEEEEEC---CSSSEEEEEEEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEecccccccccccchhHHHHHHHHHHHhhcCCCCeEEeeeeeecc---CCCCceeEEEEe
Confidence            678887 32    23334443321     1122356778888887765   99999999986331   111223578999


Q ss_pred             eccccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------
Q psy7174          72 KIFTKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------  119 (188)
Q Consensus        72 e~~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------  119 (188)
                      |++.+ ++..+          +..+..++ .|++.||.|||+++       |+||       +||+|||++.        
T Consensus        99 e~~~~-~L~~~~~~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~  176 (308)
T 3g33_A           99 EHVDQ-DLRTYLDKAPPPGLPAETIKDLM-RQFLRGLDFLHANCIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMAL  176 (308)
T ss_dssp             ECCCC-BHHHHHHTCCTTCSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCTTTEEECTTSCEEECSCSCTTTSTTCCCS
T ss_pred             hhhhc-CHHHHHhhccCCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCEEEeeCccccccCCCccc
Confidence            99975 66654          34566677 89999999999998       7777       5999999754        


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                        ..||..|  +|||++.+.. ++.++||||+||++|+|++|++||.+.+..+.+.++.+..+.|++..||
T Consensus       177 ~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (308)
T 3g33_A          177 TPVVVTLWY--RAPEVLLQST-YATPVDMWSVGCIFAEMFRRKPLFCGNSEADQLGKIFDLIGLPPEDDWP  244 (308)
T ss_dssp             GGGGCCCSS--CCHHHHHTSC-CCSTHHHHHHHHHHHHTTTSSCSCCCSSHHHHHHHHHHHHCCCCTTTSC
T ss_pred             CCccccccc--cCchHHcCCC-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCChhhcc
Confidence              4578899  9999998766 9999999999999999999999999999999999999999999888885

>3l9p_A Anaplastic lymphoma kinase; kinase domain, ATP-binding, glycoprotein, membrane, nucleotide-binding, phosphoprotein, proto-oncogene; 1.80A {Homo sapiens}

Probab=99.96  E-value=8.1e-29  Score=198.64  Aligned_cols=171  Identities=15%  Similarity=0.210  Sum_probs=132.8

Q ss_pred             cccccc-c-----CC----cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q-----SK----WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~-----~~----~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .     +.    ..++|.++.. ......++.+|+.++++++||||+++++++        .++...+++|||
T Consensus        84 fg~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~--------~~~~~~~lv~e~  155 (367)
T 3l9p_A           84 FGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVRCIGVS--------LQSLPRFILLEL  155 (367)
T ss_dssp             SSCEEEEEECC-----CCEEEEEEECCSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEEC
T ss_pred             CEEEEEEEEccCCCCCcceeEEEEecccccChhhHHHHHHHHHHHHhCCCCCCCeEEEEE--------ecCCCCEEEEEe
Confidence            678887 2     11    2234433332 445566789999999999999999999986        446677999999


Q ss_pred             cccccHHHHHH---------------HHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc--
Q psy7174          74 FTKTTKARFYS---------------HLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR--  119 (188)
Q Consensus        74 ~~~~~l~~~~~---------------~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~--  119 (188)
                      +.+|+|..+..               .+..++ .|++.||.|||+++       |+||          +||+|||++.  
T Consensus       156 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~kL~DFG~a~~~  234 (367)
T 3l9p_A          156 MAGGDLKSFLRETRPRPSQPSSLAMLDLLHVA-RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDI  234 (367)
T ss_dssp             CTTEEHHHHHHHHSCCSSSCCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHH
T ss_pred             CCCCCHHHHHHhhccccCccccccHHHHHHHH-HHHHHHHHHHHhCCeeCCCCChhhEEEecCCCCceEEECCCcccccc
Confidence            99999988643               344566 79999999999998       5554          6999999754  


Q ss_pred             -----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         120 -----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       120 -----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                                 ..+|..|  +|||++.+.. ++.++|||||||++|||++ |.+||.+.+..+....+......+.+..+
T Consensus       235 ~~~~~~~~~~~~~~t~~y--~aPE~~~~~~-~~~~~DvwslG~il~ellt~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  311 (367)
T 3l9p_A          235 YRAGYYRKGGCAMLPVKW--MPPEAFMEGI-FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPKNC  311 (367)
T ss_dssp             HHHSSCTTCCGGGSCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred             ccccccccCCCcCCcccE--ECHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccC
Confidence                       3457789  9999998765 9999999999999999998 99999998888888777766555554443

>3mwu_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, bumped kinase inhibitor, BKI; HET: BK3; 1.98A {Cryptosporidium parvum} PDB: 3igo_A* 3ncg_A*

Probab=99.96  E-value=8.7e-29  Score=205.04  Aligned_cols=162  Identities=22%  Similarity=0.311  Sum_probs=131.1

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|++++++++||||+++++++        .+....++++||+.++
T Consensus        35 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~~~  106 (486)
T 3mwu_A           35 FGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL--------EDSSSFYIVGELYTGG  106 (486)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEHHHHBCSCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCCSC
T ss_pred             CEEEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHHHhCCCCCcCeEEEEE--------EcCCEEEEEEEcCCCC
Confidence            788887 2    333445554432  234557789999999999999999999986        4467789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~  122 (188)
                      +|...        +..+..++ .|++.||.|||+++       |+||          +||+|||++.          ..|
T Consensus       107 ~L~~~~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g  185 (486)
T 3mwu_A          107 ELFDEIIKRKRFSEHDAARII-KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG  185 (486)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEESSSSTTCCEEECSCSCTTTBCCC----CCTT
T ss_pred             cHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeccCchHHEEEecCCCCCCEEEEECCcCeECCCCCccCCCcC
Confidence            98764        34566677 89999999999998       5555          5999999864          458


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |+.|  +|||++.+ . |+.++||||+||++|+|++|.+||.+.+..+.+..+....
T Consensus       186 t~~y--~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~  238 (486)
T 3mwu_A          186 TAYY--IAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGK  238 (486)
T ss_dssp             GGGG--CCGGGGGS-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CCCC--CCHHHhCC-C-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Confidence            8999  99999876 3 8999999999999999999999999988888777776543

>3c0i_A Peripheral plasma membrane protein CASK; neurexin, Ca2+/calmodulin dependent protein kinase, Mg synaptic plasticity, pseudokinase, maguk; HET: 3AM; 1.85A {Homo sapiens} PDB: 3c0h_A* 3c0g_A* 3mfr_A* 3mfs_A* 3mft_A 3mfu_A* 3tac_A

Probab=99.96  E-value=3.1e-29  Score=199.88  Aligned_cols=150  Identities=21%  Similarity=0.178  Sum_probs=118.6

Q ss_pred             cccccc-c----CCccccccccccc-----hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD-----VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~-----~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.+.+..     ....+.+.+|+++++.++||||+++++++        .++...+++|||+
T Consensus        37 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~--------~~~~~~~lv~e~~  108 (351)
T 3c0i_A           37 FSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVELLETY--------SSDGMLYMVFEFM  108 (351)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHTSSSCCHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECC
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhhccccccchHHHHHHHHHHHHhCCCCCCCcEEEEE--------EeCCEEEEEEeCC
Confidence            678887 2    2333444443311     11356789999999999999999999986        3456789999999


Q ss_pred             ccccHHHH------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc------
Q psy7174          75 TKTTKARF------------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR------  119 (188)
Q Consensus        75 ~~~~l~~~------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~------  119 (188)
                      .+++|...            +..+..++ .|++.||.|||+++       |+||          +||+|||++.      
T Consensus       109 ~g~~L~~~l~~~~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivHrDlkp~NIl~~~~~~~~~vkl~Dfg~a~~~~~~~  187 (351)
T 3c0i_A          109 DGADLCFEIVKRADAGFVYSEAVASHYM-RQILEALRYCHDNNIIHRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESG  187 (351)
T ss_dssp             SSCBHHHHHHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECSSSTTCCEEECCCTTCEECCTTS
T ss_pred             CCCCHHHHHHHhcccCCCCCHHHHHHHH-HHHHHHHHHHHHCCceeccCChHHeEEecCCCCCcEEEecCcceeEecCCC
Confidence            99998653            23455566 89999999999998       5555          5999999753      


Q ss_pred             -----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 -----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                           ..||+.|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.
T Consensus       188 ~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~  236 (351)
T 3c0i_A          188 LVAGGRVGTPHF--MAPEVVKREP-YGKPVDVWGCGVILFILLSGCLPFYGT  236 (351)
T ss_dssp             CBCCCCCSCGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCSS
T ss_pred             eeecCCcCCcCc--cCHHHHcCCC-CCchHhhHHHHHHHHHHHHCCCCCCCc
Confidence                 3578899  9999998765 899999999999999999999999764

>3p86_A Serine/threonine-protein kinase CTR1; ETR1, ERS1, ETR2, phosphorylation, transferase; HET: STU; 2.50A {Arabidopsis thaliana} PDB: 3ppz_A*

Probab=99.96  E-value=1.7e-28  Score=192.45  Aligned_cols=160  Identities=15%  Similarity=0.115  Sum_probs=123.8

Q ss_pred             cccccc---cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ---QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+   .++..++|.+.+.  .....+++.+|++++++++||||+++++++        .++...+++|||+.+++|
T Consensus        50 ~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~L  121 (309)
T 3p86_A           50 FGTVHRAEWHGSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGAV--------TQPPNLSIVTEYLSRGSL  121 (309)
T ss_dssp             SEEEEEEEETTEEEEEEEECCCCCSHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSTTCCEEEEECCTTCBH
T ss_pred             CeEEEEEEECCCcEEEEEecCCCCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------EECCceEEEEecCCCCcH
Confidence            677887   2333445544442  344556789999999999999999999986        445678999999999999


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHhhcC---------CCCe-------EEEecCCccc-----------cc
Q psy7174          80 ARFY-----------SHLRYLENQQILEGLQALKSSM---------PALL-------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        80 ~~~~-----------~~~~~~~~~qi~~gl~~lH~~~---------~~~i-------lkl~dfg~~~-----------~~  121 (188)
                      ..+.           ..+..++ .|++.||.|||+.+         |+||       +||+|||++.           ..
T Consensus       122 ~~~l~~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~~  200 (309)
T 3p86_A          122 YRLLHKSGAREQLDERRRLSMA-YDVAKGMNYLHNRNPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAA  200 (309)
T ss_dssp             HHHHHSTTHHHHSCHHHHHHHH-HHHHHHHHHHHTSSSCCCCTTCCGGGEEECTTCCEEECCCC----------------
T ss_pred             HHHHhhcCCCCCCCHHHHHHHH-HHHHHHHHHHHcCCCCEECCCCChhhEEEeCCCcEEECCCCCCccccccccccccCC
Confidence            8752           3355566 79999999999986         5555       6999999753           45


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      ||..|  +|||++.+.. ++.++||||+||++|++++|+.||.+.+..+....+.
T Consensus       201 gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~elltg~~Pf~~~~~~~~~~~~~  252 (309)
T 3p86_A          201 GTPEW--MAPEVLRDEP-SNEKSDVYSFGVILWELATLQQPWGNLNPAQVVAAVG  252 (309)
T ss_dssp             -CCTT--SCHHHHTTCC-CCTTHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHHH
T ss_pred             CCccc--cChhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence            78899  9999998765 8999999999999999999999999887766665553

>2psq_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xr0_A

Probab=99.96  E-value=1.4e-28  Score=197.52  Aligned_cols=150  Identities=19%  Similarity=0.244  Sum_probs=120.8

Q ss_pred             chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH------------------
Q psy7174          24 DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS------------------   84 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~------------------   84 (188)
                      .....+.+.+|+++++++ +||||++++++|        .++...+++|||+.+|+|..+..                  
T Consensus       126 ~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  197 (370)
T 2psq_A          126 TEKDLSDLVSEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPE  197 (370)
T ss_dssp             BHHHHHHHHHHHHHHHHSCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHHHHHHHTCCC-----------CC
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE--------ccCCCEEEEEEcCCCCCHHHHHHhhCCcccccccccccccc
Confidence            344556789999999999 899999999986        44667899999999999987642                  


Q ss_pred             ------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCC
Q psy7174          85 ------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAP  131 (188)
Q Consensus        85 ------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aP  131 (188)
                            .+..++ .|++.||.|||+++       |+||       +||+|||++..             .++..|  +||
T Consensus       198 ~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~t~~y--~aP  274 (370)
T 2psq_A          198 EQMTFKDLVSCT-YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW--MAP  274 (370)
T ss_dssp             CCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCSSCEETTCCCTTCTTTTTTSCGGG--CCH
T ss_pred             ccCCHHHHHHHH-HHHHHHHHHHHhCCeeccccchhhEEECCCCCEEEccccCCcccCcccceecccCCCcccce--ECH
Confidence                  234466 79999999999998       6666       59999998652             234579  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      |++.+.. ++.++|||||||++|||++ |..||.+.+..+....+......+.|.
T Consensus       275 E~~~~~~-~~~~~DvwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  328 (370)
T 2psq_A          275 EALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA  328 (370)
T ss_dssp             HHHHTCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCT
T ss_pred             hHhcCCC-CCcHHHHHHHHHHHHHHHcCCCCCCCCCCHHHHHHHHhcCCCCCCCC
Confidence            9998765 9999999999999999998 999999887766666665554444443

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.96  E-value=8.2e-29  Score=203.56  Aligned_cols=171  Identities=18%  Similarity=0.219  Sum_probs=134.3

Q ss_pred             cccccc---cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+   .++..++|.++.  ....+.+.+|++++++++||||+++++++..       .+...+++|||+.+|+|..
T Consensus       206 fg~V~~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~-------~~~~~~iv~e~~~~g~L~~  276 (450)
T 1k9a_A          206 FGDVMLGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGGLYIVTEYMAKGSLVD  276 (450)
T ss_dssp             SEEEEEEEETTEEEEEEEESS--CTTSHHHHHHHHHHHTCCCTTBCCEEEEEEC-------TTSCEEEEEECCTTCBHHH
T ss_pred             CeeEEEEEecCCeEEEEEeCC--chHHHHHHHHHHHHHhccCCCEEEEEEEEEc-------CCCceEEEEEecCCCcHHH
Confidence            678887   233334554443  2356789999999999999999999998522       2346899999999999987


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCC
Q psy7174          82 FY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRG  129 (188)
Q Consensus        82 ~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~  129 (188)
                      +.          ..+..++ .|++.||.|||+++       |+|+       +||+|||++.        ..++..|  +
T Consensus       277 ~l~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~y--~  353 (450)
T 1k9a_A          277 YLRSRGRSVLGGDCLLKFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW--T  353 (450)
T ss_dssp             HHHHHCTTTCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTSCEEECCCTTCEECC------CCCTTT--S
T ss_pred             HHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCCHhhEEECCCCCEEEeeCCCcccccccccCCCCCcce--e
Confidence            63          2345566 79999999999998       5565       6999999865        2346678  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |||++.+.. ++.++|||||||++|||++ |+.||.+.+..+....+.+....+.|..+|
T Consensus       354 aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~p~~~~  412 (450)
T 1k9a_A          354 APEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP  412 (450)
T ss_dssp             CHHHHHSSC-CCHHHHHHHHHHHHHHHHTTTCCSSTTSCTTTHHHHHHTTCCCCCCTTCC
T ss_pred             CHHHhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCC
Confidence            999998765 9999999999999999998 999999888777777777776666666554

>2xrw_A Mitogen-activated protein kinase 8; transcription, MAPK signaling pathways, linear binding motif; HET: ANP; 1.33A {Homo sapiens} PDB: 1ukh_A 1uki_A* 2xs0_A* 3elj_A* 2h96_A* 2gmx_A* 2g01_A* 2no3_A* 3o2m_A* 3o17_A* 3pze_A* 3g9l_X* 2p33_A* 3cgf_A* 3cgo_A* 3g90_X* 2ok1_A* 3g9n_A* 1pmn_A* 1pmq_A* ...

Probab=99.96  E-value=3.8e-29  Score=200.69  Aligned_cols=175  Identities=25%  Similarity=0.412  Sum_probs=130.6

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|+++++.++||||+++++++....  ...+....+++|||+.++
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~--~~~~~~~~~lv~e~~~~~  115 (371)
T 2xrw_A           38 QGIVCAAYDAILERNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQK--SLEEFQDVYIVMELMDAN  115 (371)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEECTTSSHHHHHHHHHHHHHHHHCCCTTBCCEEEEECSCC--STTTCCEEEEEEECCSEE
T ss_pred             CEEEEEEEECCCCceEEEEEeccccCChHHHHHHHHHHHHHHhcCCCCccceEEeecccc--ccccccceEEEEEcCCCC
Confidence            677877 2    223334444332  3345567889999999999999999999863211  112234679999999875


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccC
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                      ....+     ...+..++ .|++.||.|||+++       |+||       +||+|||++.          ..||..|  
T Consensus       116 l~~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y--  192 (371)
T 2xrw_A          116 LCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY--  192 (371)
T ss_dssp             HHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCC----------------CTT--
T ss_pred             HHHHHhhccCHHHHHHHH-HHHHHHHHHHHHCCeecccCCHHHEEEcCCCCEEEEEeecccccccccccCCceecCCc--
Confidence            44433     34566677 89999999999998       6666       5999999854          3578889  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+.+..+.+.++.|+++
T Consensus       193 ~aPE~~~~~~-~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  248 (371)
T 2xrw_A          193 RAPEVILGMG-YKENVDIWSVGCIMGEMIKGGVLFPGTDHIDQWNKVIEQLGTPCPE  248 (371)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHC-CCCCCHH
T ss_pred             cCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCHH
Confidence            9999998765 9999999999999999999999999999999999998888777653

>3kn6_A Ribosomal protein S6 kinase alpha-5; AMP-PNP, MSK1, MSK, ATP-binding, metal-binding, NUCL binding, serine/threonine-protein kinase, transferase; 2.00A {Homo sapiens} PDB: 3kn5_A

Probab=99.96  E-value=7.6e-29  Score=195.74  Aligned_cols=150  Identities=17%  Similarity=0.239  Sum_probs=107.8

Q ss_pred             cccccc-cCCcc-ccccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++.. ..+++|...........+|+++++.++ ||||+++++++        .++...+++|||+.+++|..
T Consensus        24 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~l~~l~~h~niv~~~~~~--------~~~~~~~lv~e~~~~~~L~~   95 (325)
T 3kn6_A           24 FSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKLCEGHPNIVKLHEVF--------HDQLHTFLVMELLNGGELFE   95 (325)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEECCCCSCBHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEChhhhhhHHHHHHHHHHhcCCCCeeEEEEEE--------EcCCEEEEEEEccCCCcHHH
Confidence            677887 32222 245555544455677889999999997 99999999986        45677899999999999987


Q ss_pred             H--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc-----------cccccc
Q psy7174          82 F--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        82 ~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~-----------~~~~~~  125 (188)
                      +        +..+..++ .|++.||.|||+++       |+||          +||+|||++.           ..+|..
T Consensus        96 ~l~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~ivH~Dlkp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~t~~  174 (325)
T 3kn6_A           96 RIKKKKHFSETEASYIM-RKLVSAVSHMHDVGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLH  174 (325)
T ss_dssp             HHHHCSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEEEC----CEEEECCCTTCEECCC-------------
T ss_pred             HHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCeecCCCHHHEEEecCCCcccEEEeccccceecCCCCCcccccCCCcC
Confidence            5        34566677 89999999999998       5554          5899999864           346788


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      |  +|||++.+.. ++.++||||+||++|+|++|++||.+.
T Consensus       175 y--~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~  212 (325)
T 3kn6_A          175 Y--AAPELLNQNG-YDESCDLWSLGVILYTMLSGQVPFQSH  212 (325)
T ss_dssp             -----------CC-CCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             c--cCHHHhcCCC-CCCccchHHHHHHHHHHHhCCCCCCCC
Confidence            9  9999998765 999999999999999999999999764

>2r5t_A Serine/threonine-protein kinase SGK1; AGC protein kinase, apoptosis, ATP-binding, cytoplasm, endoplasmic reticulum, nucleotide-binding, nucleus; HET: ANP; 1.90A {Homo sapiens} PDB: 3hdm_A* 3hdn_A*

Probab=99.96  E-value=4.3e-29  Score=200.87  Aligned_cols=162  Identities=15%  Similarity=0.197  Sum_probs=122.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHH-HHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQ-DRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~i-l~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|..+ ++.++||||++++++|        .++...+++|||+.
T Consensus        51 fg~V~~~~~~~~~~~~AiK~~~~~~~~~~~~~~~~~~e~~~ll~~~~hp~Iv~l~~~~--------~~~~~~~lv~E~~~  122 (373)
T 2r5t_A           51 FGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF--------QTADKLYFVLDYIN  122 (373)
T ss_dssp             TCEEEEEEETTTCCEEEEEEEEGGGBC-------------CCBCCCCCTTBCCEEEEE--------ECSSEEEEEEECCC
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEHHHhhhhHHHHHHHHHHHHHHHhCCCCCCCCEEEEE--------EeCCEEEEEEeCCC
Confidence            788887     2333445555542   22344566778877 4678999999999976        45678999999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..++.++ .|++.||+|||+++       |+||       +||+|||++.           .+|
T Consensus       123 gg~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~givHrDlkp~NIll~~~g~ikL~DFG~a~~~~~~~~~~~~~~g  201 (373)
T 2r5t_A          123 GGELFYHLQRERCFLEPRARFYA-AEIASALGYLHSLNIVYRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCG  201 (373)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCBCGGGBCCCCCCCSBSC
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEeeCccccccccCCCccccccC
Confidence            9999775        34566677 89999999999998       6666       5999999754           467


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+.|  +|||++.+.. |+.++|+|||||++|||++|.+||.+.+..+....|...
T Consensus       202 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~G~~Pf~~~~~~~~~~~i~~~  254 (373)
T 2r5t_A          202 TPEY--LAPEVLHKQP-YDRTVDWWCLGAVLYEMLYGLPPFYSRNTAEMYDNILNK  254 (373)
T ss_dssp             CCCC--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSBHHHHHHHHHHS
T ss_pred             Cccc--cCHHHhCCCC-CCchhhhHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHhc
Confidence            8999  9999998765 999999999999999999999999998888888877654

>4e7w_A Glycogen synthase kinase 3; GSK3, PTyr195, transferase; HET: PTR; 3.30A {Ustilago maydis}

Probab=99.96  E-value=1.9e-29  Score=204.14  Aligned_cols=174  Identities=27%  Similarity=0.413  Sum_probs=132.8

Q ss_pred             cccccc-cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-
Q psy7174           5 CFKPFQ-QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-   82 (188)
Q Consensus         5 ~g~v~~-~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-   82 (188)
                      ||.||+ ..+....+++|+... ......+|+++++.++||||++++++|....  ...+....+++|||+.++.+... 
T Consensus        53 ~g~V~~a~~~~~~~~aikk~~~-~~~~~~~E~~il~~l~h~niv~l~~~~~~~~--~~~~~~~~~lv~e~~~~~l~~~~~  129 (394)
T 4e7w_A           53 FGVVFQAKLVESDEVAIKKVLQ-DKRFKNRELQIMRIVKHPNVVDLKAFFYSNG--DKKDEVFLNLVLEYVPETVYRASR  129 (394)
T ss_dssp             TEEEEEEEETTTEEEEEEEEEC-CTTSCCHHHHHHHTCCCTTBCCEEEEEEEES--SSSSCEEEEEEEECCSEEHHHHHH
T ss_pred             CeEEEEEEECCCCeEEEEEEec-CcchHHHHHHHHHhCCCCCcceEEEEEEecC--CCCCceEEEEEeeccCccHHHHHH
Confidence            678887 222222244444321 1223347999999999999999999875422  11234457899999998766543 


Q ss_pred             ----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------cccccccc
Q psy7174          83 ----------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYCT  127 (188)
Q Consensus        83 ----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y~  127 (188)
                                ...+..++ .|++.||.|||+.+       |+|+        +||+|||++.          ..+|..| 
T Consensus       130 ~~~~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~kL~DFG~a~~~~~~~~~~~~~~t~~y-  207 (394)
T 4e7w_A          130 HYAKLKQTMPMLLIKLYM-YQLLRSLAYIHSIGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSYICSRYY-  207 (394)
T ss_dssp             HHHHTTSCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSSCSCGGG-
T ss_pred             HHHhhcCCCCHHHHHHHH-HHHHHHHHHHHHCCccCCCCCHHHEEEcCCCCcEEEeeCCCcccccCCCCCcccccCcCc-
Confidence                      23466677 89999999999998       5555        6999999864          4578889 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                       +|||++.+...|+.++||||+||++|+|++|++||.+.+..+.+..|.+.++.|+.
T Consensus       208 -~aPE~~~~~~~~~~~~DiwSlG~il~ell~g~~pf~~~~~~~~l~~i~~~~g~p~~  263 (394)
T 4e7w_A          208 -RAPELIFGATNYTTNIDIWSTGCVMAELMQGQPLFPGESGIDQLVEIIKVLGTPSR  263 (394)
T ss_dssp             -CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             -cCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence             99999977556999999999999999999999999999999999999988877754

>2qol_A Ephrin receptor; receptor tyrosine kinase, juxtamembrane segment, structural genomics, mutant, structural genomics consortium, SGC, ATP- binding; 1.07A {Homo sapiens} PDB: 2qok_A 2qoi_A 2qoo_A 2qof_A 2qod_A 2qo9_A* 2gsf_A 2qo7_A* 2qo2_A* 2qoq_A* 2qon_A* 3fxx_A* 3fy2_A 2qoc_A* 2qob_A* 3dzq_A* 2r2p_A 2hel_A 2rei_A 3dko_A* ...

Probab=99.96  E-value=1.3e-28  Score=197.90  Aligned_cols=172  Identities=16%  Similarity=0.181  Sum_probs=128.4

Q ss_pred             cccccc-cCC----ccccccccc---c-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QSK----WSPNTPMAR---C-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~~----~~~~~~i~~---~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..+    ....+++|.   . .....+.+.+|++++++++||||+++++++        .++...+++|||+.
T Consensus        58 fg~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~  129 (373)
T 2qol_A           58 FGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVV--------TKSKPVMIVTEYME  129 (373)
T ss_dssp             SSEEEEC-CBCTTSCBCCEEEEECCTTCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------CSSSSCEEEEECCT
T ss_pred             CeEEEEEEEecCCCCceeEEEEEecCccCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------eeCCceEEEEeCCC
Confidence            778887 211    112344443   2 344567789999999999999999999986        44567899999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc-----------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV-----------  121 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~-----------  121 (188)
                      +++|..+.         ..+..++ .|++.||.|||+.+       |+||       +||+|||++...           
T Consensus       130 ~~sL~~~l~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  208 (373)
T 2qol_A          130 NGSLDSFLRKHDAQFTVIQLVGML-RGIASGMKYLSDMGYVHRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTR  208 (373)
T ss_dssp             TCBHHHHHHTTTTCSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------
T ss_pred             CCcHHHHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeCCCCCcceEEEcCCCCEEECcCccccccccCCccceecc
Confidence            99998863         3455666 79999999999998       6666       599999986521           


Q ss_pred             ---ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         122 ---CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       122 ---~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                         ++..|  +|||++.+.. ++.++|||||||++||+++ |+.||.+.+..+....+......|.+..+|
T Consensus       209 ~~~~~~~y--~aPE~~~~~~-~~~~~Dv~SlG~il~ellt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~  276 (373)
T 2qol_A          209 GGKIPIRW--TSPEAIAYRK-FTSASDVWSYGIVLWEVMSYGERPYWEMSNQDVIKAVDEGYRLPPPMDCP  276 (373)
T ss_dssp             -----CTT--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTC-CTTTTCCHHHHHHHHHTTEECCCCTTCB
T ss_pred             CCCcCCCc--cChhhhccCC-cCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccc
Confidence               24468  9999998765 9999999999999999997 999999988888877777666666555443

>3a8x_A Protein kinase C IOTA type; transferase; HET: TPO; 2.00A {Homo sapiens} PDB: 3a8w_A* 1zrz_A*

Probab=99.96  E-value=1.7e-28  Score=195.34  Aligned_cols=149  Identities=17%  Similarity=0.186  Sum_probs=121.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|+++++++ +||||++++++|        .++...+++|||+.
T Consensus        22 fg~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~E~~~l~~~~~hp~iv~l~~~~--------~~~~~~~lv~e~~~   93 (345)
T 3a8x_A           22 YAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLHSCF--------QTESRLFFVIEYVN   93 (345)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEEGGGSCSHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEECCCC
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhHHhcchHHHHHHHHHHHHHHhcCCCCccCeEEEEE--------EeCCEEEEEEeCCC
Confidence            688887     2334456655543   233456688999999987 899999999986        45678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..++.++ .|++.||.|||+++       |+||       +||+|||++.           ..|
T Consensus        94 gg~L~~~l~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~g~~kL~DFG~a~~~~~~~~~~~~~~g  172 (345)
T 3a8x_A           94 GGDLMFHMQRQRKLPEEHARFYS-AEISLALNYLHERGIIYRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCG  172 (345)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCGGGCBCSCCTTCCBCCCCS
T ss_pred             CCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCceecCCCHHHEEECCCCCEEEEeccccccccCCCCcccccCC
Confidence            9999875        34566777 89999999999998       6666       5999999754           367


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      |+.|  +|||++.+.. ++.++|+||+||++|||++|++||..
T Consensus       173 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~  212 (345)
T 3a8x_A          173 TPNY--IAPEILRGED-YGFSVDWWALGVLMFEMMAGRSPFDI  212 (345)
T ss_dssp             CGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTT
T ss_pred             Cccc--cCccccCCCC-CChHHhHHHHHHHHHHHHhCCCCcCC
Confidence            8999  9999998765 89999999999999999999999965

>3n9x_A Phosphotransferase; malaria kinase, structural genomics, structural genomics CON SGC; 2.05A {Plasmodium berghei} PDB: 3nie_A*

Probab=99.96  E-value=9.3e-29  Score=202.26  Aligned_cols=174  Identities=31%  Similarity=0.442  Sum_probs=131.3

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+++.  .....+++.+|+++|++++||||+++++++...   ........++++|++.+ 
T Consensus        39 ~g~V~~a~~~~~~~~vAiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~nIv~l~~~~~~~---~~~~~~~~~lv~e~~~~-  114 (432)
T 3n9x_A           39 YGYVYLAYDKNTEKNVAIKKVNRMFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPD---DLLKFDELYIVLEIADS-  114 (432)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECSTTTSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCCS---CTTTCCCEEEEEECCSE-
T ss_pred             CEEEEEEEECCCCcEEEEEEeCchhcChHHHHHHHHHHHHHHHcCCCCcceEEEEEecC---CCCcCCeEEEEEecCCc-
Confidence            677887 2    233345544442  334557889999999999999999999986321   12223578999999874 


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------------
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------------  119 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------------  119 (188)
                      +|..+        +..+..++ .|++.||.|||+.+       |+||       +||+|||++.                
T Consensus       115 ~L~~~~~~~~~l~~~~~~~i~-~qil~aL~~LH~~givHrDlkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~~~  193 (432)
T 3n9x_A          115 DLKKLFKTPIFLTEEHIKTIL-YNLLLGENFIHESGIIHRDLKPANCLLNQDCSVKVCDFGLARTINSEKDTNIVNDLEE  193 (432)
T ss_dssp             EHHHHHHSSCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEEC--------------
T ss_pred             CHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCCCCCCCCHHHeEECCCCCEEEccCCCcccccccccccccccccc
Confidence            76664        35677777 89999999999998       6676       5999999754                


Q ss_pred             -----------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-----------CCCCCCCCC----
Q psy7174         120 -----------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-----------KAPFLPGES----  167 (188)
Q Consensus       120 -----------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-----------g~~pf~~~~----  167 (188)
                                       .+||.+|  +|||++.....|+.++||||+||++|||++           |.++|.+.+    
T Consensus       194 ~~~~~~~~~~~~~~~~~~~gt~~Y--~APE~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~p~f~g~~~~~~  271 (432)
T 3n9x_A          194 NEEPGPHNKNLKKQLTSHVVTRWY--RAPELILLQENYTKSIDIWSTGCIFAELLNMLQSHINDPTNRFPLFPGSSCFPL  271 (432)
T ss_dssp             -----------------CCCCCTT--CCHHHHTTCSCCCTHHHHHHHHHHHHHHHTTCTTTCSSGGGCCCSCCCSCSCC-
T ss_pred             cccccccccchhccccCCCCCccc--cCHHHHhcCCCCCcccccchHHHHHHHHHhcccccccccccccccCCCcccccc
Confidence                             3468899  999997555559999999999999999997           566666654    


Q ss_pred             -------------hHHHHHHHHhhcCCCCCC
Q psy7174         168 -------------DLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       168 -------------~~~~~~~i~~~~~~p~~~  185 (188)
                                   ..+++..|.+.++.|+.+
T Consensus       272 ~~~~~~~~~~~~~~~~ql~~i~~~~g~p~~~  302 (432)
T 3n9x_A          272 SPDRNSKKVHEKSNRDQLNIIFNIIGTPTED  302 (432)
T ss_dssp             ---------CHHHHHHHHHHHHHHHCSCCHH
T ss_pred             CcccccccccccchHHHHHHHHHhcCCCCHH
Confidence                         367788888888887653

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.96  E-value=1.9e-28  Score=201.46  Aligned_cols=170  Identities=18%  Similarity=0.252  Sum_probs=133.8

Q ss_pred             cccccc-cC---CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QS---KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~---~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ ..   ...++|.++.. ....+.+.+|++++++++||||+++++++         .+...+++|||+.+|+|.
T Consensus       197 fg~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hp~iv~~~~~~---------~~~~~~iv~e~~~~gsL~  266 (452)
T 1fmk_A          197 FGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLL  266 (452)
T ss_dssp             SCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE---------CSSSCEEEECCCTTCBHH
T ss_pred             CeEEEEEEECCCceEEEEEeccC-CCCHHHHHHHHHHHHhCCCCCEeeEEEEE---------cCCceEEEehhhcCCCHH
Confidence            788887 21   22334444332 23356789999999999999999999985         225689999999999998


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      .+.          ..+..++ .|++.||.|||+++       |+|+       +||+|||++..            .++.
T Consensus       267 ~~l~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~ivHrDlkp~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~  345 (452)
T 1fmk_A          267 DFLKGETGKYLRLPQLVDMA-AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI  345 (452)
T ss_dssp             HHHSHHHHTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCG
T ss_pred             HHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCChhhEEECCCCCEEECCCccceecCCCceecccCCcccc
Confidence            763          2455566 79999999999998       6666       59999998652            2345


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.... ++.++|||||||++|||++ |+.||.+.+..+....+.+..+.|.|..+|
T Consensus       346 ~y--~aPE~~~~~~-~~~~sDvwslG~~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~  407 (452)
T 1fmk_A          346 KW--TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP  407 (452)
T ss_dssp             GG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSC
T ss_pred             cc--cCHhHHhcCC-CCccccHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            68  9999998765 9999999999999999999 999999999888888888777777666654

>1luf_A Muscle-specific tyrosine kinase receptor MUSK; phosphorylation, signal transduction, MASS spectrometry, transferase; 2.05A {Rattus norvegicus} SCOP: d.144.1.7

Probab=99.96  E-value=2.9e-28  Score=192.75  Aligned_cols=171  Identities=15%  Similarity=0.205  Sum_probs=132.8

Q ss_pred             cccccc-cC---------Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QS---------KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~---------~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ ..         +..++|.+++. ..+..+.+.+|++++++++||||+++++++        .++...+++|||
T Consensus        60 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~  131 (343)
T 1luf_A           60 FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC--------AVGKPMCLLFEY  131 (343)
T ss_dssp             SCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSCEEEEEC
T ss_pred             CeeEEEEEecCcCCCCCceeEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEEEEEEEE--------ccCCceEEEEec
Confidence            678887 21         22334444433 344567789999999999999999999986        446778999999


Q ss_pred             cccccHHHHHH--------------------------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-----
Q psy7174          74 FTKTTKARFYS--------------------------------HLRYLENQQILEGLQALKSSM-------PALL-----  109 (188)
Q Consensus        74 ~~~~~l~~~~~--------------------------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-----  109 (188)
                      +.+++|..+..                                .+..++ .|+++||.|||+++       |+||     
T Consensus       132 ~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~  210 (343)
T 1luf_A          132 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIA-RQVAAGMAYLSERKFVHRDLATRNCLVGEN  210 (343)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             CCCCcHHHHHHHhCcccccccccccccccccccccCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCcceEEECCC
Confidence            99999987642                                244466 79999999999998       6666     


Q ss_pred             --EEEecCCccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy7174         110 --KKFVGIGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLT  173 (188)
Q Consensus       110 --lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~  173 (188)
                        +||+|||++.             ..+|..|  +|||++.+.. ++.++|+|||||++|+|++ |..||.+.+..+...
T Consensus       211 ~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y--~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~  287 (343)
T 1luf_A          211 MVVKIADFGLSRNIYSADYYKADGNDAIPIRW--MPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY  287 (343)
T ss_dssp             GCEEECCCSCHHHHTGGGCBC----CCBCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             CeEEEeecCCCcccccCccccccCCCccccee--cChhhhccCC-cCcccccHHHHHHHHHHHhcCCCcCCCCChHHHHH
Confidence              5999999753             2356679  9999998765 9999999999999999998 999999888877777


Q ss_pred             HHHhhcCCCCCCCC
Q psy7174         174 RIFQTLGTPSEDTW  187 (188)
Q Consensus       174 ~i~~~~~~p~~~~~  187 (188)
                      .+......+.|..+
T Consensus       288 ~~~~~~~~~~~~~~  301 (343)
T 1luf_A          288 YVRDGNILACPENC  301 (343)
T ss_dssp             HHHTTCCCCCCTTC
T ss_pred             HHhCCCcCCCCCCC
Confidence            77655444444444

>2c30_A Serine/threonine-protein kinase PAK 6; CRIB domain, ATP-binding, transferase, nucleotide-binding; HET: SEP; 1.6A {Homo sapiens} PDB: 2f57_A* 2j0i_A* 2cdz_A* 2q0n_A* 2x4z_A* 2bva_A*

Probab=99.96  E-value=1.9e-28  Score=193.08  Aligned_cols=160  Identities=15%  Similarity=0.185  Sum_probs=128.0

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+........+.+.+|++++++++||||+++++++        ..+...+++|||+.++++
T Consensus        58 ~g~V~~a~~~~~g~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~~~L  129 (321)
T 2c30_A           58 TGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY--------LVGEELWVLMEFLQGGAL  129 (321)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCSHHHHHHHHHHHTTCCCTTBCCEEEEE--------EETTEEEEEECCCCSCBH
T ss_pred             CeEEEEEEECCCCcEEEEEEEeccchhHHHHHHHHHHHHHhCCCCCcceEEEEE--------EECCEEEEEEecCCCCCH
Confidence            678887 2    333445544433444567789999999999999999999986        335678999999999999


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..||..| 
T Consensus       130 ~~~l~~~~l~~~~~~~i~-~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y-  207 (321)
T 2c30_A          130 TDIVSQVRLNEEQIATVC-EAVLQALAYLHAQGVIHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKSLVGTPYW-  207 (321)
T ss_dssp             HHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSSSCCBCCCCSCGGG-
T ss_pred             HHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEECCCCcEEEeeeeeeeecccCccccccccCCccc-
Confidence            886       34566677 89999999999998       6666       5999999743           3578889 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                       +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+....+.
T Consensus       208 -~aPE~~~~~~-~~~~~Dv~slG~il~el~~g~~pf~~~~~~~~~~~~~  254 (321)
T 2c30_A          208 -MAPEVISRSL-YATEVDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLR  254 (321)
T ss_dssp             -CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             -cCHhhhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence             9999998765 8999999999999999999999998877666555543

>3uc3_A Serine/threonine-protein kinase SRK2I; SNRK2, ABA signaling, transferase; 1.90A {Arabidopsis thaliana} PDB: 3zut_A 3zuu_A 3uc4_A 3ujg_A 3udb_A

Probab=99.96  E-value=1.5e-28  Score=196.81  Aligned_cols=151  Identities=19%  Similarity=0.203  Sum_probs=114.0

Q ss_pred             cccccc-cCCcc-cccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .++.. ..+|+|..  .....+.+.+|+.+++.++||||+++++++        .+....+++|||+.+++|.
T Consensus        33 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~~~~L~  104 (361)
T 3uc3_A           33 FGVARLMRDKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI--------LTPTHLAIIMEYASGGELY  104 (361)
T ss_dssp             TSSEEEEEETTTCCEEEEEEEESSTTSCHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEECCCSCBHH
T ss_pred             CEEEEEEEECCCCcEEEEEEEecCccccHHHHHHHHHHHhCCCCCCCcEEEEE--------eeCCEEEEEEEeCCCCCHH
Confidence            678887 22221 23444432  223346788999999999999999999986        3466789999999999998


Q ss_pred             HH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccccc
Q psy7174          81 RF--------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTLYC  126 (188)
Q Consensus        81 ~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~~y  126 (188)
                      .+        +..+..++ .|++.||.|||+++       |+||         +||+|||++.          ..||+.|
T Consensus       105 ~~l~~~~~~~~~~~~~i~-~ql~~~L~~LH~~~ivH~Dlkp~Nill~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~~y  183 (361)
T 3uc3_A          105 ERICNAGRFSEDEARFFF-QQLLSGVSYCHSMQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKSTVGTPAY  183 (361)
T ss_dssp             HHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCSCCCCGGGEEECSSSSCCEEECCCCCC---------------CTT
T ss_pred             HHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEEcCCCCceEEEeecCccccccccCCCCCCcCCCCc
Confidence            75        34566677 89999999999998       5555         6999999754          4688999


Q ss_pred             cCCCCccccccCCCC-chhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         127 TRGAPELLFGARMYG-VGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~-~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                        +|||++.+.. ++ .++||||+||++|+|++|+.||.+.+
T Consensus       184 --~aPE~~~~~~-~~~~~~DiwslG~il~ell~g~~Pf~~~~  222 (361)
T 3uc3_A          184 --IAPEVLLRQE-YDGKIADVWSCGVTLYVMLVGAYPFEDPE  222 (361)
T ss_dssp             --SCHHHHHCSS-CCHHHHHHHHHHHHHHHHHHSSCSCC---
T ss_pred             --CChhhhcCCC-CCCCeeeeehhHHHHHHHHhCCCCCCCCc
Confidence              9999998766 55 45999999999999999999997643

>4eqm_A Protein kinase; transferase; HET: ANP; 3.00A {Staphylococcus aureus subsp}

Probab=99.96  E-value=9.3e-29  Score=192.52  Aligned_cols=157  Identities=17%  Similarity=0.249  Sum_probs=123.0

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...   .....+.+.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~g   95 (294)
T 4eqm_A           24 MSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSMIDVD--------EEDDCYYLVMEYIEG   95 (294)
T ss_dssp             TEEEEEEEETTTCSEEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCBTTBCCEEEEE--------ECSSEEEEEEECCCS
T ss_pred             CEEEEEEEECCCCCeEEEEEeccCccccHHHHHHHHHHHHHHhcCCCCCCceEEEee--------eeCCeEEEEEeCCCC
Confidence            677886 2    223334444331   234456789999999999999999999985        446678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVC  122 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~  122 (188)
                      ++|..+        ...+..++ .|++.||.|||+++       |+|+       +||+|||++.            ..|
T Consensus        96 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~g  174 (294)
T 4eqm_A           96 PTLSEYIESHGPLSVDTAINFT-NQILDGIKHAHDMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLG  174 (294)
T ss_dssp             CBHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCSSSTTC-------------
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEECCCCCEEEEeCCCccccccccccccCcccc
Confidence            999876        23456666 79999999999998       6666       5999999754            347


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLT  173 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~  173 (188)
                      |+.|  +|||.+.+.. ++.++|+||+|+++|+|++|+.||.+.+......
T Consensus       175 t~~y--~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~  222 (294)
T 4eqm_A          175 TVQY--FSPEQAKGEA-TDECTDIYSIGIVLYEMLVGEPPFNGETAVSIAI  222 (294)
T ss_dssp             CCSS--CCHHHHHTCC-CCTTHHHHHHHHHHHHHHHSSCSSCSSCHHHHHH
T ss_pred             Cccc--cCHhHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHH
Confidence            8899  9999998765 8999999999999999999999998877655433

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.96  E-value=1.5e-28  Score=204.32  Aligned_cols=171  Identities=16%  Similarity=0.203  Sum_probs=132.9

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    +...++|.++.. ....+.+.+|+++|++++||||++++++|        .++...+++|||+.+|+|
T Consensus       233 fg~Vy~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~hpniv~l~~~~--------~~~~~~~lv~E~~~~g~L  303 (495)
T 1opk_A          233 YGEVYEGVWKKYSLTVAVKTLKED-TMEVEEFLKEAAVMKEIKHPNLVQLLGVC--------TREPPFYIITEFMTYGNL  303 (495)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBH
T ss_pred             CeEEEEEEEcCCCeEEEEEEecCc-ccchHHHHHHHHHHHhcCCCCEeeEEEEE--------ecCCcEEEEEEccCCCCH
Confidence            788887 2    222334444332 23467899999999999999999999986        445678999999999999


Q ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------ccc
Q psy7174          80 ARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCT  123 (188)
Q Consensus        80 ~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~  123 (188)
                      ..+.          ..+..++ .|++.||.|||+++       |+||       +||+|||++..            .++
T Consensus       304 ~~~l~~~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  382 (495)
T 1opk_A          304 LDYLRECNRQEVSAVVLLYMA-TQISSAMEYLEKKNFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP  382 (495)
T ss_dssp             HHHHHHSCTTTSCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTCEECCTTCCEECCTTCCCC
T ss_pred             HHHHHhcCcCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCChhhEEECCCCcEEEeecccceeccCCceeecCCCcCC
Confidence            8763          2345566 79999999999998       6666       59999998652            234


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..|  +|||++.... ++.++|||||||++|||++ |..||.+.+..+....+......+.|..+|
T Consensus       383 ~~y--~aPE~~~~~~-~~~~sDvwSlG~~l~el~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~  445 (495)
T 1opk_A          383 IKW--TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP  445 (495)
T ss_dssp             GGG--CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTCC
T ss_pred             cce--eCHhHHhcCC-CCcHHhHHhHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            568  9999998765 8999999999999999998 999999888777777676666655555443

>3gni_B Strad alpha; kinase fold, pseudokinase, alpha helical repeat protein, ADA protein, ATP-binding, cell cycle, kinase, nucleotide-bindin nucleus; HET: ATP CIT; 2.35A {Homo sapiens} PDB: 2wtk_B*

Probab=99.96  E-value=1.5e-28  Score=198.06  Aligned_cols=155  Identities=15%  Similarity=0.173  Sum_probs=122.6

Q ss_pred             ccccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           4 VCFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         4 ~~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      -||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||++++++|        .++...+++|||+.+
T Consensus        39 ~~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~  110 (389)
T 3gni_B           39 DLMTVNLARYKPTGEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNIVPYRATF--------IADNELWVVTSFMAY  110 (389)
T ss_dssp             TTEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTT
T ss_pred             CceEEEEEEEcCCCCEEEEEEecccccChHHHHHHHHHHHHHHhCCCCCCCcEeEEE--------EECCEEEEEEEccCC
Confidence            3677887 2    333445544432  344557788999999999999999999986        346678999999999


Q ss_pred             ccHHHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------
Q psy7174          77 TTKARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        77 ~~l~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      +++..+.          ..+..++ .|++.||.|||+++       |+||       +||+|||.+.             
T Consensus       111 ~~L~~~l~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~kl~dfg~~~~~~~~~~~~~~~~  189 (389)
T 3gni_B          111 GSAKDLICTHFMDGMNELAIAYIL-QGVLKALDYIHHMGYVHRSVKASHILISVDGKVYLSGLRSNLSMISHGQRQRVVH  189 (389)
T ss_dssp             CBHHHHHHHTCTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCGGGCEECEETTEECSCBC
T ss_pred             CCHHHHHhhhcccCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEEcCCCCEEEcccccceeeccccccccccc
Confidence            9998763          3466677 89999999999998       6666       5999998642             


Q ss_pred             -----ccccccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         120 -----HVCTLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                           ..||..|  +|||++.+. ..++.++||||+||++|+|++|++||.+.+..
T Consensus       190 ~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  243 (389)
T 3gni_B          190 DFPKYSVKVLPW--LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPAT  243 (389)
T ss_dssp             CCCTTCTTTGGG--SCHHHHSTTSSCBCTHHHHHHHHHHHHHHHHSSCTTTTCCST
T ss_pred             cccccccccccc--cCHHHHhccCCCCCcHhHHHHHHHHHHHHHHCCCCCCCCCHH
Confidence                 2577789  999999763 34899999999999999999999999875543

>2jam_A Calcium/calmodulin-dependent protein kinase type 1G; transferase, kinase, membrane, ATP-binding, prenylation, serine/threonine-protein kinase, alternative splicing; HET: J60; 1.7A {Homo sapiens} PDB: 2jc6_A* 1a06_A

Probab=99.96  E-value=4.6e-28  Score=189.04  Aligned_cols=163  Identities=19%  Similarity=0.225  Sum_probs=127.2

Q ss_pred             cccccc-----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+     +++..++|.+++......+.+.+|++++++++||||+++++++        .++...++++||+.++++
T Consensus        22 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L   93 (304)
T 2jam_A           22 FSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIY--------ESTTHYYLVMQLVSGGEL   93 (304)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEECC------HHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCCSCBH
T ss_pred             CceEEEEEECCCCCEEEEEEEecccccchHHHHHHHHHHHhCCCCCeeehhhhc--------ccCCEEEEEEEcCCCccH
Confidence            678886     2333445555544334456788999999999999999999986        345678999999999998


Q ss_pred             HHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc---------cccccc
Q psy7174          80 ARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR---------HVCTLY  125 (188)
Q Consensus        80 ~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~---------~~~~~~  125 (188)
                      ..+        +..+..++ .|++.||.|||+.+       |+||          +|++|||++.         ..|+..
T Consensus        94 ~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dikp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  172 (304)
T 2jam_A           94 FDRILERGVYTEKDASLVI-QQVLSAVKYLHENGIVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPG  172 (304)
T ss_dssp             HHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCSCCGGGCEESSSSTTCCEEBCSCSTTCCCCCBTTHHHHSCCC
T ss_pred             HHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCCHHHEEEecCCCCCCEEEccCCcceecCCCccccccCCCC
Confidence            775        34456666 89999999999988       5555          5899999754         347889


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |  +|||++.+.. ++.++|+||+||++|+|++|..||.+.+.......+.+..
T Consensus       173 y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~  223 (304)
T 2jam_A          173 Y--VAPEVLAQKP-YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGY  223 (304)
T ss_dssp             B--CCTTTBSSCS-CCHHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHCC
T ss_pred             c--cChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCC
Confidence            9  9999998765 8999999999999999999999999888777777766544

>4hcu_A Tyrosine-protein kinase ITK/TSK; transferase-transferase inhibitor complex; HET: 13L; 1.43A {Homo sapiens} PDB: 4hct_A* 4hcv_A* 3t9t_A* 1sm2_A* 1snu_A* 1snx_A 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.96  E-value=4.2e-28  Score=186.06  Aligned_cols=167  Identities=14%  Similarity=0.155  Sum_probs=129.5

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.+.+ .....+++.+|++++++++||||+++++++        .++...+++|||+.++++.
T Consensus        23 ~g~V~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   93 (269)
T 4hcu_A           23 FGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC--------LEQAPICLVFEFMEHGCLS   93 (269)
T ss_dssp             SCEEEEEEETTTEEEEEEEECT-TSBCHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSEEEEEECCTTCBHH
T ss_pred             ccEEEEEEecCCCeEEEEEecc-cccCHHHHHHHHHHHHhCCCCCEeeEEEEE--------ecCCceEEEEEeCCCCcHH
Confidence            678887 2   12222333332 223346789999999999999999999986        4456789999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~  125 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.            ..++..
T Consensus        94 ~~l~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  172 (269)
T 4hcu_A           94 DYLRTQRGLFAAETLLGMC-LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK  172 (269)
T ss_dssp             HHHHTTTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGG
T ss_pred             HHHHhcCcccCHHHHHHHH-HHHHHHHHHHHhCCeecCCcchheEEEcCCCCEEeccccccccccccccccccCcccccc
Confidence            763         3455666 79999999999998       6666       5999999865            224456


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      |  +|||.+.+.. ++.++|+||+|+++|+|++ |++||.+.+..+....+......+.+
T Consensus       173 y--~aPE~~~~~~-~~~~~Di~slG~~l~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~  229 (269)
T 4hcu_A          173 W--ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP  229 (269)
T ss_dssp             G--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC
T ss_pred             c--CCHHHhcCCC-CCchhhhHHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhcCccCCCC
Confidence            9  9999998765 9999999999999999999 99999988887777777665444433

>2ozo_A Tyrosine-protein kinase ZAP-70; inactive ZAP-70, tandem SH2, autoinhibition, ITAM, hydrogen bonding network, TCR signaling, transferase; HET: ANP; 2.60A {Homo sapiens}

Probab=99.96  E-value=1.9e-28  Score=208.33  Aligned_cols=171  Identities=15%  Similarity=0.133  Sum_probs=134.8

Q ss_pred             cccccc-cC------Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QS------KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~------~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ ..      ...++|.+++. .....+++.+|+++|++++||||++++++|.         ....+++|||+.+
T Consensus       349 fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~hpniv~l~~~~~---------~~~~~lv~E~~~~  419 (613)
T 2ozo_A          349 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVCQ---------AEALMLVMEMAGG  419 (613)
T ss_dssp             SSEEEEEEEECSSCEEEEEEEECCCCCSSTTHHHHHHHHHHHTTCCCTTBCCEEEEEE---------SSSEEEEEECCTT
T ss_pred             CcEEEEEEEecCCCcEEEEEEEcCCCCChHHHHHHHHHHHHHHhCCCCCEeeEEEEec---------cCCeEEEEEeCCC
Confidence            788886 11      12335555443 3345678999999999999999999999851         2458999999999


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccccc------------
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRHV------------  121 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~~------------  121 (188)
                      |+|..+         ...+..++ .|++.||.|||+++       |+||       +||+|||++...            
T Consensus       420 g~L~~~l~~~~~~l~~~~~~~i~-~qi~~~L~~LH~~~iiHrDlkp~NILl~~~~~vkL~DFGla~~~~~~~~~~~~~~~  498 (613)
T 2ozo_A          420 GPLHKFLVGKREEIPVSNVAELL-HQVSMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  498 (613)
T ss_dssp             CBHHHHHTTCTTTSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCSTTTTCC-----------
T ss_pred             CcHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHHCCEEcCcCCHHHEEEcCCCcEEEeeccCcccccCCCceeeeccC
Confidence            999875         24566677 89999999999998       6666       599999986532            


Q ss_pred             --ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         122 --CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       122 --~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                        ++..|  +|||++.... ++.++|||||||++|||++ |+.||.+.+..+....+.+....+.|..+|
T Consensus       499 ~~~~~~y--~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~  565 (613)
T 2ozo_A          499 GKWPLKW--YAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP  565 (613)
T ss_dssp             ---CCTT--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCSHHHHHHHHTTCCCCCCTTCC
T ss_pred             CCCccce--eCHhhhcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCC
Confidence              23568  9999997755 9999999999999999998 999999998888888887776666665554

>2y94_A 5'-AMP-activated protein kinase catalytic subunit; transferase, nucleotide-binding, staurosporine-binding, serine/threonine-protein kinase; HET: TPO STU AMP; 3.24A {Rattus norvegicus}

Probab=99.96  E-value=2.1e-28  Score=202.47  Aligned_cols=163  Identities=19%  Similarity=0.243  Sum_probs=130.3

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   ..+..+.+.+|+++++.++||||+++++++        .+....++++||+.+
T Consensus        29 fg~V~~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~l~~~~--------~~~~~~~lv~E~~~g  100 (476)
T 2y94_A           29 FGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIRREIQNLKLFRHPHIIKLYQVI--------STPSDIFMVMEYVSG  100 (476)
T ss_dssp             SSCEEEEEETTTCCEEEEEEEEHHHHHHTTTHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCSS
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhhccCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEeCCCC
Confidence            788887 2    333445544432   223456789999999999999999999986        345678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      ++|..+        +..+..++ .|++.||.|||+++       |+||       +||+|||++.          ..||+
T Consensus       101 g~L~~~l~~~~~l~~~~~~~i~-~qi~~aL~~LH~~givHrDLkp~NIll~~~~~vkL~DFG~a~~~~~~~~~~~~~gt~  179 (476)
T 2y94_A          101 GELFDYICKNGRLDEKESRRLF-QQILSGVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSP  179 (476)
T ss_dssp             EEHHHHTTSSSSCCHHHHHHHH-HHHHHHHHHHHTTTEECSCCSGGGEEECTTCCEEECCCSSCEECCTTCCBCCCCSCS
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCCcccccHHHEEEecCCCeEEEeccchhhccccccccccCCCc
Confidence            999875        45566777 89999999999998       6666       5999999754          45788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .|  +|||++.+....+.++||||+||++|+|++|+.||.+.+......+|...
T Consensus       180 ~y--~aPE~~~~~~~~~~~~DiwSlGvil~elltG~~Pf~~~~~~~~~~~i~~~  231 (476)
T 2y94_A          180 NY--AAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPFDDDHVPTLFKKICDG  231 (476)
T ss_dssp             TT--CCHHHHTTCCBCSHHHHHHHHHHHHHHHHHSSCSSCCSSSHHHHHHHHTT
T ss_pred             Ce--EChhhccCCCCCCCcceehhhHHHHHHHhhCCCCCCCCCHHHHHHHHhcC
Confidence            99  99999987654578999999999999999999999988777776666554

>3h4j_B AMPK kdaid, SNF1-like protein kinase SSP2; ATP-binding, nucleotide-binding, phosphoprotei serine/threonine-protein kinase, transferase; 2.80A {Schizosaccharomyces pombe}

Probab=99.96  E-value=1.9e-28  Score=194.50  Aligned_cols=150  Identities=17%  Similarity=0.188  Sum_probs=117.1

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   ..+..+.+.+|+++++.++||||+++++++        .+....+++|||+ +
T Consensus        22 ~g~V~~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~l~~~~--------~~~~~~~lv~E~~-~   92 (336)
T 3h4j_B           22 FGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYDVI--------TTPTDIVMVIEYA-G   92 (336)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCSHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEECCC-C
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHccchhHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EeCCEEEEEEECC-C
Confidence            678887 2    223334444332   123345789999999999999999999986        3456789999999 5


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      |++..+        +..+..++ .|++.||.|||+.+       |+||       +||+|||++.          ..||+
T Consensus        93 g~l~~~l~~~~~l~~~~~~~i~-~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~DFG~s~~~~~~~~~~~~~gt~  171 (336)
T 3h4j_B           93 GELFDYIVEKKRMTEDEGRRFF-QQIICAIEYCHRHKIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSP  171 (336)
T ss_dssp             EEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHHTCCCCCCSTTTEEECTTCCEEECCSSCTBTTTTSBTTCCCTTST
T ss_pred             CcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCchhhEEEcCCCCEEEEEeccceeccCCcccccccCCc
Confidence            565553        34566677 89999999999998       7777       5999999754          45788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      .|  +|||++.+....+.++||||+||++|+|++|+.||.+.
T Consensus       172 ~y--~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~Pf~~~  211 (336)
T 3h4j_B          172 NY--AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDE  211 (336)
T ss_dssp             TT--SCGGGSCCSGGGCHHHHHHHHHHHHHHHHHSSCSSBCS
T ss_pred             Cc--CCHHHHcCCCCCCCccchhHHHHHHHHHHhCCCCCCCc
Confidence            99  99999987653478999999999999999999999654

>3pfq_A PKC-B, PKC-beta, protein kinase C beta type; phosphorylation, transferase; HET: TPO SEP ANP; 4.00A {Rattus norvegicus} PDB: 1tbn_A 1tbo_A 2e73_A

Probab=99.96  E-value=3.1e-28  Score=208.95  Aligned_cols=162  Identities=18%  Similarity=0.165  Sum_probs=133.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   ..+..+.+.+|.+++..+ +||||++++++|        .+....++||||+.
T Consensus       354 fG~V~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~~~E~~~l~~~~~~~~i~~l~~~~--------~~~~~~~lV~E~~~  425 (674)
T 3pfq_A          354 FGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLHSCF--------QTMDRLYFVMEYVN  425 (674)
T ss_dssp             TBCEEEEEESSSCCEEEEEEEEHHHHHHTTTTHHHHHHHHHHTCTTCCTTBCCEEEEC--------BCSSEEEEEEECCC
T ss_pred             CEEEEEEEECCCCcEEEEEEEeccccccHHHHHHHHHHHHHHHhccCCCeEEEEEEEE--------EeCCEEEEEEeCcC
Confidence            788887     2334456655542   234556788999999987 699999999975        45678899999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..+..++ .||+.||+|||+.+       |+||       +||+|||++.           ..|
T Consensus       426 gg~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~gIiHrDLKp~NILl~~~g~ikL~DFGla~~~~~~~~~~~~~~G  504 (674)
T 3pfq_A          426 GGDLMYHIQQVGRFKEPHAVFYA-AEIAIGLFFLQSKGIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKTFCG  504 (674)
T ss_dssp             SCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTSEECCCCCSTTEEECSSSCEEECCCTTCEECCCTTCCBCCCCS
T ss_pred             CCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeEeccCChhhEEEcCCCcEEEeecceeeccccCCcccccccC
Confidence            9999876        34566677 89999999999998       7787       5999999754           468


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+.|  +|||++.+.. |+.++|||||||++|||++|++||.+.+..+.+..|...
T Consensus       505 T~~Y--~APE~l~~~~-~~~~~DvwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~  557 (674)
T 3pfq_A          505 TPDY--IAPEIIAYQP-YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDELFQSIMEH  557 (674)
T ss_dssp             CSSS--CCHHHHTCCC-BSTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHSS
T ss_pred             CCcc--cCHhhhcCCC-CCccceEechHHHHHHHHcCCCCCCCCCHHHHHHHHHhC
Confidence            9999  9999998765 999999999999999999999999999988888888654

>3nyv_A Calmodulin-domain protein kinase 1; serine/threonine protein kinase, transferase, calcium-bindin binding, EF hand, bumped kinase inhibitor; HET: MSE DTQ; 1.88A {Toxoplasma gondii} PDB: 3i79_A* 3i7b_A* 3n51_A* 3i7c_A* 3sx9_A* 3sxf_A* 3t3u_A* 3t3v_A* 3upx_A* 3upz_A* 3v51_A* 3v5p_A* 3v5t_A* 3ku2_A* 3hx4_A*

Probab=99.96  E-value=1.3e-28  Score=203.74  Aligned_cols=164  Identities=20%  Similarity=0.282  Sum_probs=132.1

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+.+.   .....+.+.+|++++++++||||++++++|        .+....++++||+.+
T Consensus        39 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~~  110 (484)
T 3nyv_A           39 FGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLYEFF--------EDKGYFYLVGEVYTG  110 (484)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEETTTCCBSSCHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEECCCCS
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhhhcccchHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EeCCEEEEEEecCCC
Confidence            678886     2334445544432   234567789999999999999999999986        446688999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------cc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HV  121 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~  121 (188)
                      +++...        +..+..++ .|++.||.|||+++       |+||          +||+|||++.          ..
T Consensus       111 ~~L~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~  189 (484)
T 3nyv_A          111 GELFDEIISRKRFSEVDAARII-RQVLSGITYMHKNKIVHRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKI  189 (484)
T ss_dssp             CBHHHHHHTCSCCBHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCTTHHHHBCCCCSHHHHT
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCCHHHEEEecCCCCCcEEEEeeeeeEEcccccccccCC
Confidence            999764        34566677 89999999999998       5555          5999999753          45


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      ||+.|  +|||++.+ . |+.++||||+||++|+|++|.+||.+.+..+.+..+......
T Consensus       190 gt~~y--~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~  245 (484)
T 3nyv_A          190 GTAYY--IAPEVLHG-T-YDEKCDVWSTGVILYILLSGCPPFNGANEYDILKKVEKGKYT  245 (484)
T ss_dssp             TGGGT--CCHHHHHT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCCC
T ss_pred             CCccc--cCceeecC-C-CCCcceeHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHcCCCC
Confidence            78999  99999876 3 899999999999999999999999999988888887665433

>4ejn_A RAC-alpha serine/threonine-protein kinase; AKT1, autoinhibition, allosteric inhibitor, kinase inhibitor hydrophobic collapase, ATPase; HET: 0R4; 2.19A {Homo sapiens} PDB: 3o96_A*

Probab=99.96  E-value=7.5e-29  Score=203.46  Aligned_cols=161  Identities=14%  Similarity=0.131  Sum_probs=120.2

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+++.   .....+.+.+|+++++.++||||++++++|        .++...+++|||+.+
T Consensus       161 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~l~~~~--------~~~~~~~lv~e~~~~  232 (446)
T 4ejn_A          161 FGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFLTALKYSF--------QTHDRLCFVMEYANG  232 (446)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHC-------------CCCCCSCTTSCCEEEEE--------EETTEEEEEECCCSS
T ss_pred             CEEEEEEEEcCCCCEEEEEEEEhhhhhhhHHHHHHHHHHHHHHhCCCCeEeeEEEEE--------eeCCEEEEEEeeCCC
Confidence            678886     2334445555442   233446678999999999999999999986        345678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhh-cC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKS-SM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      ++|..+        +..+..++ .|++.||+|||+ .+       |+||       +||+|||++.           ..|
T Consensus       233 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~giiHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~g  311 (446)
T 4ejn_A          233 GELFFHLSRERVFSEDRARFYG-AEIVSALDYLHSEKNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCG  311 (446)
T ss_dssp             CBHHHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHHTCCCCCCCCGGGEEECSSSCEEECCCCCCCTTCC-----CCSSS
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHhhcCCEEECCCCHHHEEECCCCCEEEccCCCceeccCCCcccccccC
Confidence            999775        34566677 899999999998 66       6666       5999999754           457


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |..|  +|||++.+.. |+.++||||+||++|||++|+.||.+.+.......+..
T Consensus       312 t~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~i~~  363 (446)
T 4ejn_A          312 TPEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHEKLFELILM  363 (446)
T ss_dssp             CGGG--CCHHHHHTSC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             Cccc--cCHhhcCCCC-CCCccchhhhHHHHHHHhhCCCCCCCCCHHHHHHHHHh
Confidence            8999  9999998765 99999999999999999999999998887776666644

>3tki_A Serine/threonine-protein kinase CHK1; cell checkpoint, transferase-transferase inhib complex; HET: S25; 1.60A {Homo sapiens} PDB: 2qhm_A* 2r0u_A* 3tkh_A* 2qhn_A* 2hy0_A* 2hog_A* 2hxq_A* 2hxl_A* 3f9n_A*

Probab=99.96  E-value=1.8e-28  Score=193.44  Aligned_cols=153  Identities=17%  Similarity=0.171  Sum_probs=118.7

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... ..+..+.+.+|+.+++.++||||+++++++        .++...+++|||+.+++
T Consensus        20 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~--------~~~~~~~lv~e~~~~~~   91 (323)
T 3tki_A           20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR--------REGNIQYLFLEYCSGGE   91 (323)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEECCTTEE
T ss_pred             CEEEEEEEECCCCcEEEEEEEEcccccchHHHHHHHHHHHHhCCCCCCCeEEEEE--------ecCCeEEEEEEcCCCCc
Confidence            678887 2    233334444322 233446789999999999999999999986        45667899999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCT  123 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~  123 (188)
                      |..+        +..+..++ .|++.||.|||+.+       |+||       +||+|||++.             ..||
T Consensus        92 L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~LH~~givH~Dlkp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~gt  170 (323)
T 3tki_A           92 LFDRIEPDIGMPEPDAQRFF-HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT  170 (323)
T ss_dssp             GGGGSBTTTBCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCSCCSC
T ss_pred             HHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccccchHHEEEeCCCCEEEEEeeccceeccCCcccccCCCccC
Confidence            8775        45566777 89999999999998       6666       5999999763             4578


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      ..|  +|||++.+...++.++||||+||++|+|++|+.||.+.+.
T Consensus       171 ~~y--~aPE~~~~~~~~~~~~DiwslG~il~~ll~g~~pf~~~~~  213 (323)
T 3tki_A          171 LPY--VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  213 (323)
T ss_dssp             GGG--SCHHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSCT
T ss_pred             cCc--cCcHHhccCCCCCCcccHHHHHHHHHHHHhCCCCCCCCch
Confidence            899  9999998765357899999999999999999999976543

>3eb0_A Putative uncharacterized protein; kinase cryptosporidium parvum, ATP-binding, kinase, nucleoti binding; HET: PTR DRK; 2.65A {Cryptosporidium parvum iowa II}

Probab=99.96  E-value=6.3e-29  Score=200.13  Aligned_cols=175  Identities=25%  Similarity=0.386  Sum_probs=130.5

Q ss_pred             cccccc-cCCcc-ccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCC----------------------
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPT----------------------   60 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~----------------------   60 (188)
                      ||.||+ .++.. ..+|+|+.. .......+|+++++.++||||++++++|.......                      
T Consensus        20 fg~V~~a~~~~~~~~vAiK~~~-~~~~~~~~E~~il~~l~hpnIv~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (383)
T 3eb0_A           20 FGIVCEVFDIESGKRFALKKVL-QDPRYKNRELDIMKVLDHVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNN   98 (383)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEE-CCTTSCCHHHHHHTTCCCTTBCCEEEEEEEC--------------------------
T ss_pred             CEEEEEEEECCCCCEEEEEEEe-cCcchHHHHHHHHHHcCCCCccchhheeeecCccccccccccccccccccccccccc
Confidence            788887 22222 244455431 11233458999999999999999999875422100                      


Q ss_pred             --------CCCCCccEEEEeccccccHHHH------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----
Q psy7174          61 --------TLSTSSDYIVVKIFTKTTKARF------------YSHLRYLENQQILEGLQALKSSM-------PALL----  109 (188)
Q Consensus        61 --------~~~~~~~~iv~e~~~~~~l~~~------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----  109 (188)
                              ..++...+++|||+.+ ++...            +..+..++ .|++.||.|||+.+       |+|+    
T Consensus        99 ~~~~~~~~~~~~~~~~lv~e~~~~-~L~~~l~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~gi~H~Dikp~Nil~~~  176 (383)
T 3eb0_A           99 HHKSVIVNPSQNKYLNVIMEYVPD-TLHKVLKSFIRSGRSIPMNLISIYI-YQLFRAVGFIHSLGICHRDIKPQNLLVNS  176 (383)
T ss_dssp             -----------CCEEEEEECCCSE-EHHHHHHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHTTTEECSCCCGGGEEEET
T ss_pred             ccccccccCCCceEEEEEEecCCc-cHHHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCcCccCccCHHHEEEcC
Confidence                    0234457899999986 54432            23466677 89999999999998       5554    


Q ss_pred             ----EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         110 ----KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       110 ----lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                          +||+|||++.          ..+|..|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+.++
T Consensus       177 ~~~~~kl~Dfg~a~~~~~~~~~~~~~~t~~y--~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i  254 (383)
T 3eb0_A          177 KDNTLKLCDFGSAKKLIPSEPSVAYICSRFY--RAPELMLGATEYTPSIDLWSIGCVFGELILGKPLFSGETSIDQLVRI  254 (383)
T ss_dssp             TTTEEEECCCTTCEECCTTSCCCCCCCCSSC--CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHH
T ss_pred             CCCcEEEEECCCCcccCCCCCCcCcccCCCc--cCHHHhcCCCCCCcchhhhhHHHHHHHHHhCCCCCCCCChHHHHHHH
Confidence                6999999864          4567889  99999887555899999999999999999999999999999999999


Q ss_pred             HhhcCCCCC
Q psy7174         176 FQTLGTPSE  184 (188)
Q Consensus       176 ~~~~~~p~~  184 (188)
                      .+..+.|+.
T Consensus       255 ~~~~g~p~~  263 (383)
T 3eb0_A          255 IQIMGTPTK  263 (383)
T ss_dssp             HHHHCCCCH
T ss_pred             HHHhCCCCH
Confidence            988887753

>3f3z_A Calcium/calmodulin-dependent protein kinase with domain and 4 calmodulin like EF...; calcium dependent protein kinase; HET: SEP DRK; 1.84A {Cryptosporidium parvum iowa II} PDB: 2qg5_A*

Probab=99.96  E-value=2.8e-28  Score=187.69  Aligned_cols=161  Identities=20%  Similarity=0.233  Sum_probs=127.1

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..    ...++|.+.+......+.+.+|++++++++||||+++++++        .++...++++||+.++++
T Consensus        22 ~g~V~~~~~~~~~~~~a~k~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L   93 (277)
T 3f3z_A           22 WGEVKIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF--------EDNTDIYLVMELCTGGEL   93 (277)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEEECCCSCBH
T ss_pred             CEEEEEEEeCCCCcEEEEEeehhhccchHHHHHHHHHHHHhCCCCCEeeEEEEE--------ecCCeEEEEEeccCCCcH
Confidence            677887 22    22334444444445567899999999999999999999986        446678999999999999


Q ss_pred             HHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccc
Q psy7174          80 ARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~  124 (188)
                      ...        +..+..++ .|++.||.|||+++       |+|+          +||+|||++.          ..+|.
T Consensus        94 ~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~t~  172 (277)
T 3f3z_A           94 FERVVHKRVFRESDAARIM-KDVLSAVAYCHKLNVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTP  172 (277)
T ss_dssp             HHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECCTTSCBCCCCSCT
T ss_pred             HHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCccCCCCCHHHEEEecCCCCCcEEEEecccceeccCccchhccCCCC
Confidence            765        34566677 89999999999998       5555          5899999753          45788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      .|  +|||++.+ . ++.++|+||+|+++|+|++|+.||.+.+..+....+.+.
T Consensus       173 ~y--~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  222 (277)
T 3f3z_A          173 YY--VSPQVLEG-L-YGPECDEWSAGVMMYVLLCGYPPFSAPTDSEVMLKIREG  222 (277)
T ss_dssp             TT--CCHHHHTT-C-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             Cc--cChHHhcc-c-CCchhhehhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhC
Confidence            89  99999865 3 899999999999999999999999887766665555443

>3kk8_A Calcium/calmodulin dependent protein kinase II; ATP-binding, nucleotide-binding, serine/threonine-protein kinase, transferase; HET: TPO; 1.72A {Caenorhabditis elegans} PDB: 3kk9_A* 3kl8_A 2vn9_A* 3bhh_A*

Probab=99.96  E-value=9.6e-28  Score=185.19  Aligned_cols=163  Identities=21%  Similarity=0.165  Sum_probs=128.2

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...++++||+.++
T Consensus        19 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~   90 (284)
T 3kk8_A           19 FSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLHDSI--------QEESFHYLVFDLVTGG   90 (284)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCCSC
T ss_pred             CeEEEEEEEcCCCceEEEEEeecccCCHHHHHHHHHHHHHHHHcCCCCcCeEEEEE--------EcCCEEEEEEecCCCC
Confidence            677886 2    233334444332  344557788999999999999999999986        4456789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~  122 (188)
                      ++...        ...+..++ .|++.||.|||+.+       |+|+          +||+|||++.          ..|
T Consensus        91 ~l~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  169 (284)
T 3kk8_A           91 ELFEDIVAREFYSEADASHCI-QQILESIAYCHSNGIVHRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAG  169 (284)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEESSSSTTCCEEECCCTTCEECCSSCBCCCSCS
T ss_pred             CHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcCcCCCCHHHEEEecCCCCCcEEEeeceeeEEcccCccccCCCC
Confidence            98664        34456667 89999999999998       4454          5999999753          457


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |..|  +|||++.+.. ++.++||||+|+++|+|++|..||.+.+.......+....
T Consensus       170 ~~~y--~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~~~~~~~~~~~  223 (284)
T 3kk8_A          170 TPGY--LSPEVLKKDP-YSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGA  223 (284)
T ss_dssp             CGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             CcCC--cCchhhcCCC-CCcccchHHHHHHHHHHHHCCCCCCCCchhHHHHHHHhcc
Confidence            8889  9999998765 8999999999999999999999998887776666665443

>4fl3_A Tyrosine-protein kinase SYK; transferase; HET: ANP; 1.90A {Homo sapiens} PDB: 4fl2_A* 1a81_A* 1csy_A* 1csz_A*

Probab=99.96  E-value=2.6e-28  Score=208.22  Aligned_cols=171  Identities=15%  Similarity=0.159  Sum_probs=133.7

Q ss_pred             ccccccc---C----Ccccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQQ---S----KWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~~---~----~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+.   .    +..++|.++..  .....+++.+|++++++++||||+++++++         .+...+++|||+.
T Consensus       382 fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~l~~~~---------~~~~~~lv~E~~~  452 (635)
T 4fl3_A          382 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC---------EAESWMLVMEMAE  452 (635)
T ss_dssp             SEEEEEEEEECSSCEEEEEEEEECGGGGCGGGHHHHHHHHHHHHHCCCTTBCCEEEEE---------ESSSEEEEEECCT
T ss_pred             CEEEEEEEEcCCCcceEEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE---------ecCCEEEEEEccC
Confidence            7788861   1    22345544442  233457899999999999999999999985         2345789999999


Q ss_pred             cccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------
Q psy7174          76 KTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------  120 (188)
Q Consensus        76 ~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------  120 (188)
                      +|+|..+.        ..+..++ .|++.||.|||+++       |+||       +||+|||++..             
T Consensus       453 ~g~L~~~l~~~~~l~~~~~~~i~-~qi~~~L~yLH~~~iiHrDLkp~NILl~~~~~~kL~DFGla~~~~~~~~~~~~~~~  531 (635)
T 4fl3_A          453 LGPLNKYLQQNRHVKDKNIIELV-HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  531 (635)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCTTHHHHTTC----------
T ss_pred             CCCHHHHHhhCCCCCHHHHHHHH-HHHHHHHHHHHHCCEeCCCCChHhEEEeCCCCEEEEEcCCccccccCccccccccC
Confidence            99998863        3456677 89999999999998       6676       59999997542             


Q ss_pred             -cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 -VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 -~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                       .+|..|  +|||++.... ++.++|||||||++|||++ |+.||.+.+..+....+.+....+.|..+|
T Consensus       532 ~~~t~~y--~APE~~~~~~-~~~~sDvwSlGv~l~ellt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~  598 (635)
T 4fl3_A          532 GKWPVKW--YAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCP  598 (635)
T ss_dssp             ---CGGG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             CCCceee--eChhhhcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence             234568  9999997765 9999999999999999998 999999998888887777766666665554

>3qyz_A Mitogen-activated protein kinase 1; transferase, serine/threonine-protein kinase, ATP-binding CE phosphorylation; HET: CME Z8B SO4; 1.46A {Rattus norvegicus} PDB: 2fys_B 1erk_A* 3qyi_A* 3erk_A* 3qyw_A* 4erk_A* 4gsb_A* 4gt3_A* 4gva_A* 2z7l_A* 2erk_A* 1gol_A* 2gph_A 3zu7_A 3zuv_A* 3o71_A 3r63_A 3c9w_A* 2y9q_A* 4fmq_A* ...

Probab=99.96  E-value=1.9e-28  Score=196.03  Aligned_cols=173  Identities=29%  Similarity=0.450  Sum_probs=133.0

Q ss_pred             cccccc-cC----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .+    +..++|.+... .....+.+.+|++++++++||||+++++++..   .........++++|++.+ +
T Consensus        40 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~---~~~~~~~~~~iv~e~~~~-~  115 (364)
T 3qyz_A           40 YGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRA---PTIEQMKDVYIVQDLMET-D  115 (364)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECC---SSTTTCCCEEEEEECCSE-E
T ss_pred             CeEEEEEEECCCCeEEEEEEeccccCcHHHHHHHHHHHHHHhcCCCCCccceeEEec---CCccccceEEEEEcccCc-C
Confidence            567776 22    22234433322 23344678899999999999999999998632   122333567999999985 6


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------cccc
Q psy7174          79 KARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------HVCT  123 (188)
Q Consensus        79 l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~  123 (188)
                      +..+       ...+..++ .|++.||.|||+.+       |+||       +||+|||++.              ..||
T Consensus       116 L~~~l~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~gt  194 (364)
T 3qyz_A          116 LYKLLKTQHLSNDHICYFL-YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT  194 (364)
T ss_dssp             HHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSC
T ss_pred             HHHHHHhCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCChHhEEECCCCCEEEEeCcceEecCCCCCccccccccccc
Confidence            6554       34566677 89999999999998       6666       5999999753              2678


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +.|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+...++.|++
T Consensus       195 ~~y--~aPE~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~  253 (364)
T 3qyz_A          195 RWY--RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQ  253 (364)
T ss_dssp             GGG--CCHHHHHTBCSCSTHHHHHHHHHHHHHHHHSSCSSCCSSGGGHHHHHHHHHCSCCH
T ss_pred             cCC--CCCHHhcCCCCCCcchhHHHHHHHHHHHHHCCCCCCCCChHHHHHHHHHHhCCCCH
Confidence            889  99999876555899999999999999999999999999999999999887777654

>4euu_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: SEP BX7; 1.80A {Homo sapiens}

Probab=99.96  E-value=1.4e-28  Score=193.32  Aligned_cols=164  Identities=13%  Similarity=0.205  Sum_probs=124.5

Q ss_pred             cccccc-----cCCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+     +++..++|.+... .....+.+.+|++++++++||||+++++++..      ......+++|||+.+++
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~   95 (319)
T 4euu_A           22 TANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE------TTTRHKVLIMEFCPCGS   95 (319)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC------TTTCCEEEEEECCTTCB
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCcceEEEEeec------CCCceEEEEEeCCCCCC
Confidence            678887     2334445554443 23445678899999999999999999998622      33457799999999999


Q ss_pred             HHHHH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc----------
Q psy7174          79 KARFY-----------SHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR----------  119 (188)
Q Consensus        79 l~~~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~----------  119 (188)
                      |..+.           ..+..++ .|++.||.|||+.+       |+||           +||+|||++.          
T Consensus        96 L~~~l~~~~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~  174 (319)
T 4euu_A           96 LYTVLEEPSNAYGLPESEFLIVL-RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS  174 (319)
T ss_dssp             HHHHHHSGGGTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEEECTTSCEEEEECCCTTCEECCTTCCBCC
T ss_pred             HHHHHHHhccccCCCHHHHHHHH-HHHHHHHHHHHHCCEecCCCCHHHEEEeccCCCCceEEEccCCCceecCCCCceee
Confidence            98762           3456666 89999999999998       6666           5899999864          


Q ss_pred             ccccccccCCCCccccc-------cCCCCchhHHHHHHHHHHHHHhCCCCCCCCC----hHHHHHHHHh
Q psy7174         120 HVCTLYCTRGAPELLFG-------ARMYGVGIDMWAVGCIICELLLKAPFLPGES----DLDQLTRIFQ  177 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~-------~~~~~~~~DiwslG~il~el~~g~~pf~~~~----~~~~~~~i~~  177 (188)
                      ..||..|  +|||++..       ...++.++||||+||++|||++|+.||....    ..+.+..+..
T Consensus       175 ~~gt~~y--~aPE~~~~~~~~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~  241 (319)
T 4euu_A          175 LYGTEEY--LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (319)
T ss_dssp             CCSCGGG--CCHHHHHHHTSCCCCCCCBCTTHHHHHHHHHHHHHHHSSCSEECTTCGGGCHHHHHHHHH
T ss_pred             cccCCCc--cCHHHhhhccccccccCCCCcHHHHHHHHHHHHHHHhCCCCCCCCCccchhHHHHHHHhc
Confidence            3578899  99999852       2348899999999999999999999996533    3444444443

>1mp8_A Focal adhesion kinase 1; tyrosine protein kinase, transferase; HET: ADP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 2ijm_A* 2etm_A* 3pxk_A* 2jkq_A* 2j0m_B* 2jkm_A* 2j0l_A* 3bz3_A* 2jko_A* 2jkk_A*

Probab=99.96  E-value=5.8e-28  Score=186.52  Aligned_cols=168  Identities=19%  Similarity=0.237  Sum_probs=123.2

Q ss_pred             cccccc-cC----Ccccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..    +....+++|..    .....+.+.+|+.++++++||||+++++++         .+...+++|||+.
T Consensus        28 ~g~Vy~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~---------~~~~~~lv~e~~~   98 (281)
T 1mp8_A           28 FGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI---------TENPVWIIMELCT   98 (281)
T ss_dssp             SSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE---------CSSSCEEEEECCT
T ss_pred             CeeEEEEEEecCCCCceEEEEEeccccCCHHHHHHHHHHHHHHHhCCCCccceEEEEE---------ccCccEEEEecCC
Confidence            677876 11    11123444442    334556789999999999999999999984         2456899999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------  120 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------  120 (188)
                      +++|..+.         ..+..++ .|++.||.|||+.+       |+||       +||+|||++..            
T Consensus        99 ~~~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  177 (281)
T 1mp8_A           99 LGELRSFLQVRKYSLDLASLILYA-YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG  177 (281)
T ss_dssp             TEEHHHHHHHTTTTSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------------
T ss_pred             CCCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecccccHHHEEECCCCCEEECccccccccCcccccccccC
Confidence            99998763         3455666 79999999999998       6666       59999998642            


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .++..|  +|||++.... ++.++||||+||++|++++ |.+||.+.+..+....+......+.+.
T Consensus       178 ~~~~~y--~aPE~~~~~~-~~~~~Di~slG~~l~ell~~g~~pf~~~~~~~~~~~i~~~~~~~~~~  240 (281)
T 1mp8_A          178 KLPIKW--MAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPP  240 (281)
T ss_dssp             -CCGGG--CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT
T ss_pred             CCcccc--cChhhcccCC-CCCccCchHHHHHHHHHHhcCCCCCCcCCHHHHHHHHHcCCCCCCCC
Confidence            235579  9999997755 8999999999999999996 999999887776666666554444443

>4agu_A Cyclin-dependent kinase-like 1; transferase, phospho-mimetic; HET: D15; 2.40A {Homo sapiens}

Probab=99.96  E-value=4.2e-28  Score=189.56  Aligned_cols=166  Identities=27%  Similarity=0.410  Sum_probs=129.1

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...++++||+.++
T Consensus        16 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~   87 (311)
T 4agu_A           16 YGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEVF--------RRKRRLHLVFEYCDHT   87 (311)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECCCCC-HHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCSEE
T ss_pred             CeEEEEEEeCCCCcEEEEEEeeccccchHHHHHHHHHHHHHHhCCCCCccchhhee--------ecCCeEEEEEEeCCCc
Confidence            677887 2    233334433332  233456788999999999999999999986        3456789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ++..+        ...+..++ .|++.||.|||+.+       |+|+       +||+|||++.           ..+|.
T Consensus        88 ~l~~~~~~~~~~~~~~~~~i~-~~l~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  166 (311)
T 4agu_A           88 VLHELDRYQRGVPEHLVKSIT-WQTLQAVNFCHKHNCIHRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATR  166 (311)
T ss_dssp             HHHHHHHTSSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECC------------G
T ss_pred             hHHHHHhhhcCCCHHHHHHHH-HHHHHHHHHHHHCCCcCCCCChhhEEEcCCCCEEEeeCCCchhccCcccccCCCcCCc
Confidence            98876        34566677 89999999999998       6666       5999999754           35678


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      .|  +|||++.+...++.++|+||+|+++|++++|.+||.+.+..+....+....+.
T Consensus       167 ~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~~~~~  221 (311)
T 4agu_A          167 WY--RSPELLVGDTQYGPPVDVWAIGCVFAELLSGVPLWPGKSDVDQLYLIRKTLGD  221 (311)
T ss_dssp             GG--CCHHHHHTCSCCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCS
T ss_pred             cc--cChHHHhcCCCCCcchhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhcc
Confidence            89  99999976555899999999999999999999999999988888777665543

>3q5i_A Protein kinase; CDPK, malaria, phosphotransferase, structural genomics, structural genomic consortium, SGC, transferase; HET: ANP; 2.10A {Plasmodium berghei}

Probab=99.96  E-value=2.3e-28  Score=203.35  Aligned_cols=161  Identities=21%  Similarity=0.276  Sum_probs=128.2

Q ss_pred             cccccc-----cCCccccccccccc-------------hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD-------------VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSS   66 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~-------------~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~   66 (188)
                      ||.||+     +++..++|.+.+..             ....+.+.+|++++++++||||++++++|        .++..
T Consensus        49 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~  120 (504)
T 3q5i_A           49 YGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKSLDHPNIIKLFDVF--------EDKKY  120 (504)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEEC----------------CTHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSE
T ss_pred             CeEEEEEEECCCCcEEEEEEEEhhhcccccccccchhhHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------EcCCE
Confidence            678886     23344455555421             13356788999999999999999999986        45677


Q ss_pred             cEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc--
Q psy7174          67 DYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR--  119 (188)
Q Consensus        67 ~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~--  119 (188)
                      .+++|||+.+|+|...        +..+..++ +|++.||.|||+.+       |+|+          +||+|||++.  
T Consensus       121 ~~lv~e~~~gg~L~~~l~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~  199 (504)
T 3q5i_A          121 FYLVTEFYEGGELFEQIINRHKFDECDAANIM-KQILSGICYLHKHNIVHRDIKPENILLENKNSLLNIKIVDFGLSSFF  199 (504)
T ss_dssp             EEEEEECCTTCBHHHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEESSTTCCSSEEECCCTTCEEC
T ss_pred             EEEEEecCCCCcHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEeCCCcHHHEEEecCCCCccEEEEECCCCEEc
Confidence            8999999999998764        34566677 89999999999998       5555          5999999764  


Q ss_pred             --------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         120 --------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       120 --------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                              ..||+.|  +|||++.+ . ++.++||||+||++|+|++|.+||.+.+..+.+..+...
T Consensus       200 ~~~~~~~~~~gt~~y--~aPE~~~~-~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~  262 (504)
T 3q5i_A          200 SKDYKLRDRLGTAYY--IAPEVLKK-K-YNEKCDVWSCGVIMYILLCGYPPFGGQNDQDIIKKVEKG  262 (504)
T ss_dssp             CTTSCBCCCCSCTTT--CCHHHHTT-C-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             CCCCccccccCCcCC--CCHHHhcc-C-CCchHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence                    4578999  99999864 3 899999999999999999999999998887777666554

>3hko_A Calcium/calmodulin-dependent protein kinase with domain and 2 calmodulin-like EF...; structural genomics, protist parasite; HET: ANP; 1.80A {Cryptosporidium parvum iowa II}

Probab=99.95  E-value=6.4e-28  Score=191.04  Aligned_cols=163  Identities=20%  Similarity=0.265  Sum_probs=124.7

Q ss_pred             cccccc-c----CCcccccccccc-----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.+.+.     .....+.+.+|++++++++||||++++++|        .++...+++|||+
T Consensus        39 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~  110 (345)
T 3hko_A           39 YGVVRVAIENQTRAIRAIKIMNKNKIRQINPKDVERIKTEVRLMKKLHHPNIARLYEVY--------EDEQYICLVMELC  110 (345)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHC---CHHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEECC
T ss_pred             CeEEEEEEECCCCceEEEeehhhhhhcccCHHHHHHHHHHHHHHHhCCCCCcceeehhh--------ccCCeEEEEEeCC
Confidence            677887 2    222334433331     234557889999999999999999999986        4466789999999


Q ss_pred             ccccHHHHH------------------------------------------------HHHHHHHHHHHHHHHHHHhhcC-
Q psy7174          75 TKTTKARFY------------------------------------------------SHLRYLENQQILEGLQALKSSM-  105 (188)
Q Consensus        75 ~~~~l~~~~------------------------------------------------~~~~~~~~~qi~~gl~~lH~~~-  105 (188)
                      .+++|..+.                                                ..+..++ .|++.||.|||+.+ 
T Consensus       111 ~gg~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~i  189 (345)
T 3hko_A          111 HGGHLLDKLNVFIDDSTGKCAMDVVKTQICPCPECNEEAINGSIHGFRESLDFVQREKLISNIM-RQIFSALHYLHNQGI  189 (345)
T ss_dssp             CSCBHHHHEEEEEETTTTEEEEEEECCCCCCSHHHHHHHHHSCC--CEEECCHHHHHHHHHHHH-HHHHHHHHHHHHTTE
T ss_pred             CCCcHHHHHHHhhcccccccccccccccccccccccccccccccccccccccccccHHHHHHHH-HHHHHHHHHHHHCCc
Confidence            999987642                                                2355566 89999999999998 


Q ss_pred             ------CCCe---------EEEecCCccc---------------ccccccccCCCCcccccc-CCCCchhHHHHHHHHHH
Q psy7174         106 ------PALL---------KKFVGIGIGR---------------HVCTLYCTRGAPELLFGA-RMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       106 ------~~~i---------lkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~  154 (188)
                            |+||         +||+|||++.               ..||+.|  +|||++... ..++.++|||||||++|
T Consensus       190 vH~Dlkp~NIll~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~DiwslG~il~  267 (345)
T 3hko_A          190 CHRDIKPENFLFSTNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYF--VAPEVLNTTNESYGPKCDAWSAGVLLH  267 (345)
T ss_dssp             ECCCCCGGGEEESCSSSCCEEECCCTTCEEGGGTTCC--------CCCGGG--CCHHHHTCSSSCCCTHHHHHHHHHHHH
T ss_pred             cccCCChhhEEEecCCCceEEEeeccccccccccCccccccccccCCCccc--cCchhhccCCCCCCcHHHHHHHHHHHH
Confidence                  4444         6999999754               3467889  999998642 34899999999999999


Q ss_pred             HHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         155 ELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       155 el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +|++|+.||.+.+..+....+...
T Consensus       268 el~~g~~pf~~~~~~~~~~~~~~~  291 (345)
T 3hko_A          268 LLLMGAVPFPGVNDADTISQVLNK  291 (345)
T ss_dssp             HHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             HHHHCCCCCCCCChHHHHHHHHhc
Confidence            999999999888776666665543

>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B

Probab=99.95  E-value=5.8e-28  Score=202.41  Aligned_cols=151  Identities=18%  Similarity=0.203  Sum_probs=122.4

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+.+.   ..+..+.+.+|++++++++||||++++++|        .+....+++|||+.+
T Consensus       198 fG~Vy~a~~~~tg~~vAiK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~--------~~~~~l~lVmE~~~g  269 (543)
T 3c4z_A          198 FGEVFACQMKATGKLYACKKLNKKRLKKRKGYQGAMVEKKILAKVHSRFIVSLAYAF--------ETKTDLCLVMTIMNG  269 (543)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CeEEEEEEECCCCcEEEEEEEEhHHhhhhHHHHHHHHHHHHHHhcCCCCEeeEEEEE--------eeCCEEEEEEEeccC
Confidence            788887     2334445555442   223446788999999999999999999976        446678999999999


Q ss_pred             ccHHHH------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          77 TTKARF------------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        77 ~~l~~~------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      |+|..+            +..+..++ .|++.||.|||+++       |+||       +||+|||++.           
T Consensus       270 g~L~~~l~~~~~~~~~l~e~~~~~~~-~qi~~aL~~LH~~gIvHrDLKP~NILl~~~g~vkL~DFGla~~~~~~~~~~~~  348 (543)
T 3c4z_A          270 GDIRYHIYNVDEDNPGFQEPRAIFYT-AQIVSGLEHLHQRNIIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKG  348 (543)
T ss_dssp             CBHHHHHHTSSTTSCSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCCBCC
T ss_pred             CCHHHHHHHhhcccccccHHHHHHHH-HHHHHHHHHHHHcCCcccCCChHHEEEeCCCCEEEeecceeeeccCCCccccc
Confidence            999764            24456667 89999999999998       6676       5999999753           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      ..||+.|  +|||++.+.. |+.++|+||+||++|||++|++||.+.+
T Consensus       349 ~~GT~~Y--~APE~l~~~~-~~~~~DiwSlGvilyelltG~~PF~~~~  393 (543)
T 3c4z_A          349 YAGTPGF--MAPELLLGEE-YDFSVDYFALGVTLYEMIAARGPFRARG  393 (543)
T ss_dssp             CCSCTTT--SCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCTT
T ss_pred             ccCCccc--cChhhhcCCC-CChHHhcCcchHHHHHHHhCCCCCCCCc
Confidence            3789999  9999998765 9999999999999999999999998753

>2qkw_B Protein kinase; three-helix bundle motif, AVRPTO-PTO duplex, layered beta- sheets, transferas; HET: SEP TPO; 3.20A {Solanum pimpinellifolium} PDB: 3hgk_A*

Probab=99.95  E-value=5.5e-28  Score=190.01  Aligned_cols=150  Identities=13%  Similarity=0.101  Sum_probs=119.9

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.+........+.+.+|++++++++||||+++++++        .++...++++||+.+++|.
T Consensus        52 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~  123 (321)
T 2qkw_B           52 FGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFC--------DERNEMILIYKYMENGNLK  123 (321)
T ss_dssp             SSEEEEEECTTCCEEEEEECCSCCSSHHHHHHHHHHGGGSCCCTTBCCEEEEC--------CCTTCCEEEEECCTTCBTG
T ss_pred             CeeEEEEEECCCCEEEEEEecccChHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------cCCCeEEEEEEcCCCCcHH
Confidence            678887 2   223334433333445567889999999999999999999986        4466789999999999987


Q ss_pred             HH------------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cc
Q psy7174          81 RF------------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HV  121 (188)
Q Consensus        81 ~~------------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~  121 (188)
                      .+            ...+..++ .|++.||.|||+++       |+|+       +||+|||++.             ..
T Consensus       124 ~~l~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  202 (321)
T 2qkw_B          124 RHLYGSDLPTMSMSWEQRLEIC-IGAARGLHYLHTRAIIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLSTVVK  202 (321)
T ss_dssp             GGSSSSCCCSCCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCSTTEEECTTCCEEECCCTTCEECSSSSCCCCBCCCE
T ss_pred             HHHhccCCCccccCHHHHHHHH-HHHHHHHHHhcCCCeecCCCCHHHEEECCCCCEEEeecccccccccccccccccccC
Confidence            64            24556666 79999999999988       7777       5999999754             23


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ||..|  +|||++.+.. ++.++||||+||++|+|++|+.||.+.
T Consensus       203 gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~p~~~~  244 (321)
T 2qkw_B          203 GTLGY--IDPEYFIKGR-LTEKSDVYSFGVVLFEVLCARSAIVQS  244 (321)
T ss_dssp             EETTT--CCHHHHHHCB-CCTHHHHHHHHHHHHHHHHCCTTCSCS
T ss_pred             CCccc--cCHHHhcCCC-CCcccchHhHHHHHHHHHhCCCccccc
Confidence            67889  9999997765 899999999999999999999998653

>3ork_A Serine/threonine protein kinase; structural genomics, TB structural genomics consortium, TBSG domain, signal transduction; HET: AGS; 1.60A {Mycobacterium tuberculosis} PDB: 3ori_A* 3orl_A* 3oro_A* 3orp_A* 3ort_A* 3f61_A* 1mru_A* 3f69_A* 3orm_A* 1o6y_A* 2fum_A*

Probab=99.95  E-value=8.1e-29  Score=194.08  Aligned_cols=164  Identities=17%  Similarity=0.193  Sum_probs=123.4

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.++..   .....+.+.+|++++++++||||+++++++...    ...+...+++|||+.+
T Consensus        25 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~----~~~~~~~~lv~e~~~g  100 (311)
T 3ork_A           25 MSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE----TPAGPLPYIVMEYVDG  100 (311)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECTTTTTSHHHHHHHHHHHTTCCCCCCTTBCCEEEEEEEE----ETTEEEEEEEEECCCE
T ss_pred             CEEEEEEEECCCCceEEEEEeCccccCCHHHHHHHHHHHHHHHcCCCCCcceEEEeeecc----CCCCcccEEEEecCCC
Confidence            677886 2    223334444432   233446788999999999999999999986321    1112234999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------c
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------H  120 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~  120 (188)
                      ++|..+.        ..+..++ .|++.||.|||+++       |+||       +||+|||++.              .
T Consensus       101 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~  179 (311)
T 3ork_A          101 VTLRDIVHTEGPMTPKRAIEVI-ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV  179 (311)
T ss_dssp             EEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEEETTSCEEECCCSCC----------------
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCCcCCCCHHHEEEcCCCCEEEeeccCccccccccccccccccc
Confidence            9998863        3456666 79999999999998       6666       5999999854              3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      .||..|  +|||++.+.. ++.++||||+||++|+|++|+.||.+.+.......+.
T Consensus       180 ~gt~~y--~aPE~~~~~~-~~~~~Di~slG~~l~~ll~g~~pf~~~~~~~~~~~~~  232 (311)
T 3ork_A          180 IGTAQY--LSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHV  232 (311)
T ss_dssp             --CCTT--CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHH
T ss_pred             CcCccc--CCHHHhcCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHh
Confidence            478899  9999998765 9999999999999999999999999887766554443

>4aaa_A Cyclin-dependent kinase-like 2; transferase, phospho-mimetic; HET: DKI; 1.53A {Homo sapiens} PDB: 4bbm_A*

Probab=99.95  E-value=7.5e-28  Score=190.09  Aligned_cols=167  Identities=28%  Similarity=0.471  Sum_probs=132.0

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++        .++...+++|||+.++
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~  109 (331)
T 4aaa_A           38 YGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEVC--------KKKKRWYLVFEFVDHT  109 (331)
T ss_dssp             TSSEEEEEETTTCCEEEEEEEESCSSCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCSEE
T ss_pred             CEEEEEEEECCCCceEEEEEEecCCCchHHHHHHHHHHHHHhhCCCCCEeeEEEEe--------ecCCEEEEEEecCCcc
Confidence            678887 2    233334433332  233445678999999999999999999986        3456789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ++..+        ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..++.
T Consensus       110 ~l~~~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivH~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~t~  188 (331)
T 4aaa_A          110 ILDDLELFPNGLDYQVVQKYL-FQIINGIGFCHSHNIIHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATR  188 (331)
T ss_dssp             HHHHHHHSTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCTTC------------CCCCC
T ss_pred             hHHHHHhhccCCCHHHHHHHH-HHHHHHHHHHHHCCEEccCcChheEEEcCCCcEEEEeCCCceeecCCccccCCCcCCc
Confidence            98876        24566677 89999999999998       5566       6999999764           35788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      .|  +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+....+.+
T Consensus       189 ~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~  244 (331)
T 4aaa_A          189 WY--RAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNL  244 (331)
T ss_dssp             TT--CCHHHHTTCTTCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSC
T ss_pred             cc--cCcccccCCCCcchHHHHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCC
Confidence            89  999999775458999999999999999999999999999888888877655543

>2w4o_A Calcium/calmodulin-dependent protein kinase type IV; calmodulin-binding, nucleotide-binding, serine/threonine-protein kinase, ATP-binding; HET: DKI; 2.17A {Homo sapiens}

Probab=99.95  E-value=5.3e-28  Score=192.68  Aligned_cols=159  Identities=23%  Similarity=0.226  Sum_probs=114.4

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+++  ....+.+.+|++++++++||||++++++|        .++...++++||+.+++|
T Consensus        66 ~g~Vy~~~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~h~niv~~~~~~--------~~~~~~~lv~e~~~~~~L  135 (349)
T 2w4o_A           66 TSIVYRCKQKGTQKPYALKVLKK--TVDKKIVRTEIGVLLRLSHPNIIKLKEIF--------ETPTEISLVLELVTGGEL  135 (349)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEC------------CHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCCSCBH
T ss_pred             CEEEEEEEECCCCcEEEEEEecc--chhHHHHHHHHHHHHhCCCCCCcceeeeE--------ecCCeEEEEEEeCCCCCH
Confidence            677887 2    22233444433  23446688999999999999999999986        345678999999999999


Q ss_pred             HHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccc
Q psy7174          80 ARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~  124 (188)
                      ..+        +..+..++ .|++.||.|||+.+       |+||          +||+|||++.          ..||.
T Consensus       136 ~~~l~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivH~Dikp~NIll~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~gt~  214 (349)
T 2w4o_A          136 FDRIVEKGYYSERDAADAV-KQILEAVAYLHENGIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTP  214 (349)
T ss_dssp             HHHHTTCSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEESSSSTTCCEEECCCC----------------CG
T ss_pred             HHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeEecCCCcccEEEecCCCCCCEEEccCccccccCcccccccccCCC
Confidence            775        34566677 89999999999988       4444          6999999754          45788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHH-HHHHHHh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD-QLTRIFQ  177 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~-~~~~i~~  177 (188)
                      .|  +|||++.+.. ++.++|||||||++|+|++|..||.+.+... .+..+..
T Consensus       215 ~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~i~~  265 (349)
T 2w4o_A          215 GY--CAPEILRGCA-YGPEVDMWSVGIITYILLCGFEPFYDERGDQFMFRRILN  265 (349)
T ss_dssp             GG--SCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCTTCHHHHHHHHHT
T ss_pred             Cc--cCHHHhcCCC-CCcccchHHHHHHHHHHHhCCCCCCCCcccHHHHHHHHh
Confidence            99  9999998765 8999999999999999999999998766544 4444444

>2acx_A G protein-coupled receptor kinase 6; GRK, G transferase; HET: ANP; 2.60A {Homo sapiens} PDB: 3nyn_A* 3nyo_A*

Probab=99.95  E-value=5.7e-28  Score=203.34  Aligned_cols=151  Identities=17%  Similarity=0.228  Sum_probs=122.3

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   .....+.+.+|+++|+.++||||++++++|        .++...+++|||+.+
T Consensus       197 fG~Vy~a~~~~tg~~vAvK~l~k~~~~~~~~~~~~~~E~~iL~~l~hp~Iv~l~~~~--------~~~~~l~lVmEy~~g  268 (576)
T 2acx_A          197 FGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNSRFVVSLAYAY--------ETKDALCLVLTLMNG  268 (576)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECCCCS
T ss_pred             CEEEEEEEECCCCCEEEEEEEEhHhhhhhHHHHHHHHHHHHHHHcCCCCEeeEEEEE--------eeCCEEEEEEEcCCC
Confidence            688887 2    333445544442   223445688999999999999999999976        456789999999999


Q ss_pred             ccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccc
Q psy7174          77 TTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        77 ~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~  122 (188)
                      |+|..+          +..+..++ .||+.||.|||+++       |+||       +||+|||++.          ..|
T Consensus       269 g~L~~~l~~~~~~~l~e~~~~~i~-~qIl~aL~yLH~~gIvHrDLKPeNILld~~g~vKL~DFGla~~~~~~~~~~~~~G  347 (576)
T 2acx_A          269 GDLKFHIYHMGQAGFPEARAVFYA-AEICCGLEDLHRERIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVG  347 (576)
T ss_dssp             CBHHHHHHSSSSCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCTTCCEECCCS
T ss_pred             CcHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHHCCEeccCCchheEEEeCCCCeEEEecccceecccCccccccCC
Confidence            999765          34566677 89999999999998       6666       5999999853          467


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      |+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+
T Consensus       348 T~~Y--~APEvl~~~~-~~~~~DiwSLGvilyeLltG~~PF~~~~  389 (576)
T 2acx_A          348 TVGY--MAPEVVKNER-YTFSPDWWALGCLLYEMIAGQSPFQQRK  389 (576)
T ss_dssp             CGGG--CCHHHHTTCE-ESSHHHHHHHHHHHHHHHHSSCSSSCSS
T ss_pred             Cccc--cCHHHHcCCC-CCccchHHHHHHHHHHHHhCCCCCcccc
Confidence            8999  9999998765 9999999999999999999999998754

>2ivs_A Proto-oncogene tyrosine-protein kinase receptor RET; nucleotide-binding, hirschsprung disease, phosphorylation, disease mutation; HET: ACK; 2.00A {Homo sapiens} PDB: 2ivt_A* 2ivu_A* 2x2k_A* 2x2l_A* 2x2m_A* 2ivv_A*

Probab=99.95  E-value=6.9e-28  Score=188.32  Aligned_cols=145  Identities=17%  Similarity=0.184  Sum_probs=117.4

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------   84 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------   84 (188)
                      .....+.+.+|++++++++||||+++++++        .++...++++||+.+++|..+..                   
T Consensus        66 ~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  137 (314)
T 2ivs_A           66 SPSELRDLLSEFNVLKQVNHPHVIKLYGAC--------SQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSS  137 (314)
T ss_dssp             CHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHHHHHHHTTTSTTEEC---------
T ss_pred             CHHHHHHHHHHHHHHhhCCCCceeeEEEEE--------ecCCceEEEEeecCCCCHHHHHHHHhhccCCccccccccccc
Confidence            344557789999999999999999999986        44667899999999999987642                   


Q ss_pred             -------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccc
Q psy7174          85 -------------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTL  124 (188)
Q Consensus        85 -------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~  124 (188)
                                   .+..++ .|++.||.|||+++       |+||       +||+|||++..             .++.
T Consensus       138 ~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  216 (314)
T 2ivs_A          138 SLDHPDERALTMGDLISFA-WQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSYVKRSQGRIPV  216 (314)
T ss_dssp             -------CEECHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEETTTEEEECCCTTCEECTTTSCEECSSCCCSCG
T ss_pred             ccccccccCcCHHHHHHHH-HHHHHHHHHHHHCCCcccccchheEEEcCCCCEEEccccccccccccccceeccCCCCcc
Confidence                         345566 79999999999998       6666       59999998642             2455


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      .|  +|||.+.+.. ++.++||||+||++|+|++ |..||.+.+.......+.....
T Consensus       217 ~y--~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~~~~~~  270 (314)
T 2ivs_A          217 KW--MAIESLFDHI-YTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLKTGHR  270 (314)
T ss_dssp             GG--CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCC
T ss_pred             cc--cChhhhcCCC-cCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHhhcCCc
Confidence            68  9999998755 8999999999999999999 9999988776665555544433

>3gen_A Tyrosine-protein kinase BTK; bruton'S tyrosine kinase, 4-amino-5-(4-phenoxyphenyl)-5H- pyrrolo[3, 2-D]pyrimidin-7-YL-cyclopentane, TEC-family; HET: B43; 1.60A {Homo sapiens} PDB: 3k54_A* 3pj2_A* 3piy_A* 3piz_A* 3pj1_A* 3pix_A* 3pj3_A* 3p08_A 3ocs_A* 3oct_A* 1k2p_A

Probab=99.95  E-value=1.2e-27  Score=184.71  Aligned_cols=168  Identities=14%  Similarity=0.143  Sum_probs=130.8

Q ss_pred             cccccc-cCC---ccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSK---WSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~---~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||. ..+   ..++|.+++. ....+++.+|++++++++||||+++++++        .++...+++|||+.++++.
T Consensus        37 ~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~  107 (283)
T 3gen_A           37 FGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--------TKQRPIFIITEYMANGCLL  107 (283)
T ss_dssp             CEEEEEEEETTTEEEEEEEECTT-SBCHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSEEEEECCCTTCBHH
T ss_pred             CceEEEEEEcCCCeEEEEEecCC-CCCHHHHHHHHHHHhcCCCCCEeeEEEEE--------ecCCCeEEEEeccCCCcHH
Confidence            677776 211   2234433332 22346789999999999999999999986        4566789999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------ccccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~  125 (188)
                      .+.         ..+..++ .|++.||.|||+++       |+|+       +||+|||++..            .+|..
T Consensus       108 ~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~  186 (283)
T 3gen_A          108 NYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR  186 (283)
T ss_dssp             HHHHCGGGCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSSCSGGGEEECTTSCEEECSTTGGGGBCCHHHHSTTSTTSCGG
T ss_pred             HHHHHhccCCCHHHHHHHH-HHHHHHHHHHHHCCccCCCCccceEEEcCCCCEEEccccccccccccccccccCCccCcc
Confidence            762         4466677 89999999999998       5666       69999998652            24556


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      |  +|||++.+.. ++.++|+||+|+++|++++ |+.||.+.+.......+.+....+.+.
T Consensus       187 y--~aPE~~~~~~-~~~~~Dv~slG~~l~~l~t~g~~p~~~~~~~~~~~~~~~~~~~~~~~  244 (283)
T 3gen_A          187 W--SPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPH  244 (283)
T ss_dssp             G--CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCCT
T ss_pred             c--CCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCccccChhHHHHHHhcccCCCCCC
Confidence            9  9999998765 8999999999999999998 999999888877777777665554444

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.95  E-value=5.7e-28  Score=202.51  Aligned_cols=170  Identities=18%  Similarity=0.252  Sum_probs=133.7

Q ss_pred             cccccc-cC---CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QS---KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~---~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ ..   ..+++|.++... ...+.+.+|+++|++++||||+++++++         .+...+++|||+.+|+|.
T Consensus       280 fg~Vy~~~~~~~~~vavK~~~~~~-~~~~~~~~E~~~l~~l~hpniv~~~~~~---------~~~~~~lv~e~~~~gsL~  349 (535)
T 2h8h_A          280 FGEVWMGTWNGTTRVAIKTLKPGT-MSPEAFLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLL  349 (535)
T ss_dssp             SEEEEEEEETTTEEEEEEEECTTS-SCHHHHHHHHHHHHHCCCTTBCCEEEEE---------CSSSCEEEECCCTTEEHH
T ss_pred             CeEEEEEEECCCceEEEEEeCCCC-CCHHHHHHHHHHHHhCCCCCEeeEEEEE---------eeccceEeeehhcCCcHH
Confidence            678887 21   223344443322 3356789999999999999999999985         235689999999999998


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      .+.          ..+..++ .|++.||.|||+++       ++||       +||+|||++..            .++.
T Consensus       350 ~~l~~~~~~~l~~~~~~~i~-~qi~~~L~~LH~~~ivHrDlkp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~  428 (535)
T 2h8h_A          350 DFLKGETGKYLRLPQLVDMA-AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI  428 (535)
T ss_dssp             HHHSHHHHTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCTTSTTTCCCHHHHTTCSTTSCG
T ss_pred             HHHhhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCCHhhEEEcCCCcEEEcccccceecCCCceecccCCcCcc
Confidence            763          3455566 79999999999988       6666       59999998652            2345


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.... ++.++|||||||++|||++ |+.||.+....+.+..+.+..+.+.+..+|
T Consensus       429 ~y--~aPE~~~~~~-~~~~sDvwSlGv~l~el~t~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~  490 (535)
T 2h8h_A          429 KW--TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP  490 (535)
T ss_dssp             GG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             cc--cCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            68  9999998765 9999999999999999999 999999999888888887777776666554

>2a2a_A Death-associated protein kinase 2; autoinhibition, transferase; 1.47A {Homo sapiens} PDB: 2cke_A* 1wmk_A 1z9x_A 2a27_A 2x0g_A 2xuu_A* 2w4k_A* 2xzs_A

Probab=99.95  E-value=6.7e-28  Score=189.64  Aligned_cols=161  Identities=18%  Similarity=0.217  Sum_probs=126.9

Q ss_pred             cccccc-c----CCccccccccccch------hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDV------NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~------~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .    ++..++|.+++...      ...+.+.+|++++++++||||+++++++        .++...++++||
T Consensus        25 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~   96 (321)
T 2a2a_A           25 FAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVITLHDVY--------ENRTDVVLILEL   96 (321)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCSSSSCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEECC
T ss_pred             CEEEEEEEECCCCeEEEEEEEecccccccccchhHHHHHHHHHHHHhCCCCCcceEEEEE--------ecCCEEEEEEEc
Confidence            678887 2    23344554444211      1356789999999999999999999986        445678999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc--------
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR--------  119 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~--------  119 (188)
                      +.+++|..+        +..+..++ .|++.||.|||+.+       |+||           +||+|||++.        
T Consensus        97 ~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~ivH~dikp~NIl~~~~~~~~~~~kl~Dfg~~~~~~~~~~~  175 (321)
T 2a2a_A           97 VSGGELFDFLAQKESLSEEEATSFI-KQILDGVNYLHTKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF  175 (321)
T ss_dssp             CCSCBHHHHHHTCSCEEHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEESCTTSSSCCEEECCCTTCEECCTTCCC
T ss_pred             CCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCChHHEEEecCCCCcCCEEEccCccceecCccccc
Confidence            999999886        34566677 89999999999998       4444           6999999754        


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        ..||..|  +|||++.+.. ++.++|+||+||++|+|++|..||.+.+..+.+..+..
T Consensus       176 ~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~  232 (321)
T 2a2a_A          176 KNIFGTPEF--VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANITS  232 (321)
T ss_dssp             CCCCSCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHT
T ss_pred             cccCCCCCc--cCcccccCCC-CCCccccHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence              3478889  9999998765 89999999999999999999999988776666555443

>2ac3_A MAP kinase-interacting serine/threonine kinase 2; DFD motif, transferase; 2.10A {Homo sapiens} PDB: 2hw7_A* 2ac5_A* 2hw6_A

Probab=99.95  E-value=5.5e-28  Score=189.31  Aligned_cols=152  Identities=15%  Similarity=0.177  Sum_probs=118.5

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+.+......+.+.+|++++.++ +||||+++++++        .++...+++|||+.+++
T Consensus        26 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   97 (316)
T 2ac3_A           26 HARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVLELIEFF--------EEEDRFYLVFEKMRGGS   97 (316)
T ss_dssp             SEEEEEEECSSSCCEEEEEEEECCSSCCHHHHHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCTTCB
T ss_pred             eEEEEEEEEcCCCcEEEEEEEeeCcchhHHHHHHHHHHHHHhcCCCCeeeEEEEE--------eeCCEEEEEEEcCCCCc
Confidence            577776 2    233345544444445567889999999985 799999999986        34567899999999999


Q ss_pred             HHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc--------------
Q psy7174          79 KARFY--------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR--------------  119 (188)
Q Consensus        79 l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~--------------  119 (188)
                      +..+.        ..+..++ .|++.||.|||+++       |+||          +||+|||++.              
T Consensus        98 L~~~l~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~dlkp~Nil~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  176 (316)
T 2ac3_A           98 ILSHIHKRRHFNELEASVVV-QDVASALDFLHNKGIAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTP  176 (316)
T ss_dssp             HHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEESCSSSSCSEEECCTTCCC--------------
T ss_pred             HHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhCCceeCCCCHHHEEEccCCCcCceEEEEccCccccccCCcccccccc
Confidence            98752        3466677 89999999999998       5555          5999999754              


Q ss_pred             ----ccccccccCCCCcccccc----CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 ----HVCTLYCTRGAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 ----~~~~~~y~~~aPe~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                          ..||..|  +|||++...    ..++.++||||+||++|+|++|++||.+.+
T Consensus       177 ~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~~~DiwslG~il~~l~~g~~pf~~~~  230 (316)
T 2ac3_A          177 ELLTPCGSAEY--MAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRC  230 (316)
T ss_dssp             -----CCSGGG--CCHHHHHHTSHHHHHHTTTHHHHHHHHHHHHHHHSSCSCCCCC
T ss_pred             ccccccCCcCc--cChHHhhcccccccCCCcccccHhHHHHHHHHHHCCCCCcccc
Confidence                2378899  999998641    237899999999999999999999997653

>3sxs_A Cytoplasmic tyrosine-protein kinase BMX; transferase-transferase inhibitor complex; HET: PP2; 1.89A {Homo sapiens} SCOP: d.144.1.7 PDB: 3sxr_A*

Probab=99.95  E-value=1.4e-27  Score=183.03  Aligned_cols=167  Identities=15%  Similarity=0.133  Sum_probs=127.7

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.++.. ....+++.+|++++++++||||+++++++        .++...+++|||+.++++.
T Consensus        21 ~g~V~~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   91 (268)
T 3sxs_A           21 FGVVKLGKWKGQYDVAVKMIKEG-SMSEDEFFQEAQTMMKLSHPKLVKFYGVC--------SKEYPIYIVTEYISNGCLL   91 (268)
T ss_dssp             TEEEEEEEETTTEEEEEEEECBT-TBCHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSEEEEEECCTTCBHH
T ss_pred             CceEEEEEecCceeEEEEEeccC-CCcHHHHHHHHHHHHhCCCCCEeeEEEEE--------ccCCceEEEEEccCCCcHH
Confidence            677886 2   122334444332 22346789999999999999999999986        4566789999999999988


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------ccccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~  125 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++..            .++..
T Consensus        92 ~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~  170 (268)
T 3sxs_A           92 NYLRSHGKGLEPSQLLEMC-YDVCEGMAFLESHQFIHRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK  170 (268)
T ss_dssp             HHHHHHGGGCCHHHHHHHH-HHHHHHHHHHHHTTEEESSCSGGGEEECTTCCEEECCTTCEEECCTTCEEECCSCCCCGG
T ss_pred             HHHHHcCCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCcCcceEEECCCCCEEEccCccceecchhhhhcccCCCcCcc
Confidence            752         3455666 89999999999998       6666       69999998642            23456


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      |  +|||.+.+.. ++.++|+||+|+++|++++ |+.||.+.+.......+......+.|
T Consensus       171 y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  227 (268)
T 3sxs_A          171 W--SAPEVFHYFK-YSSKSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRP  227 (268)
T ss_dssp             G--CCHHHHHHSE-EETTHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred             c--CCHHHHhccC-CchhhhhHHHHHHHHHHHcCCCCCccccChHHHHHHHHcCCCCCCC
Confidence            8  9999997755 8999999999999999998 99999888777766666555444333

>2zv2_A Calcium/calmodulin-dependent protein kinase kinas; beta, camkk2, E.C.2.7.11.17, phosphorylation, AMPKK, metabolism, binding, calmodulin-binding; HET: 609; 2.40A {Homo sapiens}

Probab=99.95  E-value=9.4e-28  Score=186.79  Aligned_cols=140  Identities=21%  Similarity=0.287  Sum_probs=113.1

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~~~~~~~qi~~gl~~  100 (188)
                      .+.+.+|++++++++||||+++++++..      ..+...+++|||+.++++..+       +..+..++ .|++.||.|
T Consensus        80 ~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~l~~~~~~~~~~~~~~~~~~-~qi~~~l~~  152 (298)
T 2zv2_A           80 IEQVYQEIAILKKLDHPNVVKLVEVLDD------PNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYF-QDLIKGIEY  152 (298)
T ss_dssp             -CHHHHHHHHHHTCCCTTBCCEEEEEEC------SSSSEEEEEEECCTTCBSCCSSCSSCCCHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHHhCCCCCCCeEEEEEEc------CCCCEEEEEEecCCCCcHHHHhhcCCCCHHHHHHHH-HHHHHHHHH
Confidence            3668899999999999999999998622      235678999999999988664       45566677 899999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCC--CCchhHHHHHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARM--YGVGIDMWAVGCII  153 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~--~~~~~DiwslG~il  153 (188)
                      ||+++       |+||       +||+|||++.           ..||..|  +|||++.+...  ++.++||||+||++
T Consensus       153 lH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~Di~slG~~l  230 (298)
T 2zv2_A          153 LHYQKIIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTPAF--MAPESLSETRKIFSGKALDVWAMGVTL  230 (298)
T ss_dssp             HHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECSSSSCEECCCCSCGGG--CCGGGCCTTCCCEESHHHHHHHHHHHH
T ss_pred             HHHCCeeccCCCHHHEEECCCCCEEEecCCCccccccccccccCCcCCccc--cChhhhccCCCCCCCchhhhHhHHHHH
Confidence            99998       6666       5999999754           3578899  99999976432  37889999999999


Q ss_pred             HHHHhCCCCCCCCChHHHHHHHH
Q psy7174         154 CELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       154 ~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |+|++|+.||.+.+.......+.
T Consensus       231 ~~l~~g~~pf~~~~~~~~~~~~~  253 (298)
T 2zv2_A          231 YCFVFGQCPFMDERIMCLHSKIK  253 (298)
T ss_dssp             HHHHHSSCSSCCSSHHHHHHHHH
T ss_pred             HHHHHCCCCCCCccHHHHHHHHh
Confidence            99999999998776555444443

>3tt0_A Basic fibroblast growth factor receptor 1; kinase domain, transferase, transferase-transferase inhibito; HET: 07J; 2.80A {Homo sapiens}

Probab=99.95  E-value=1.8e-27  Score=191.63  Aligned_cols=150  Identities=19%  Similarity=0.248  Sum_probs=121.6

Q ss_pred             chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH------------------
Q psy7174          24 DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS------------------   84 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~------------------   84 (188)
                      .....+++.+|+++++++ +||||++++++|        .++...+++|||+.+++|..+..                  
T Consensus       114 ~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  185 (382)
T 3tt0_A          114 TEKDLSDLISEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE  185 (382)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHHHHHHHTCCSSSSSCCCCCSSCC
T ss_pred             CHHHHHHHHHHHHHHHHhcCCchhhhheeee--------ccCCceEEEEEecCCCcHHHHHHHhcccccccccccccccc
Confidence            344557789999999999 899999999986        44667899999999999987642                  


Q ss_pred             ------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCC
Q psy7174          85 ------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAP  131 (188)
Q Consensus        85 ------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aP  131 (188)
                            .+..++ .|++.||.|||+.+       |+||       +||+|||++..             .+|..|  +||
T Consensus       186 ~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~t~~y--~aP  262 (382)
T 3tt0_A          186 EQLSSKDLVSCA-YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW--MAP  262 (382)
T ss_dssp             CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSCSCCCCSSCCCTTCCCTTCCCGGGG--SCH
T ss_pred             cccCHHHHHHHH-HHHHHHHHHHHhCCEecCCCCcceEEEcCCCcEEEcccCcccccccccccccccCCCCCcce--eCH
Confidence                  355666 79999999999998       6666       59999998642             245678  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      |++.+.. ++.++|||||||++|+|++ |..||.+.+..+....+......+.+.
T Consensus       263 E~~~~~~-~~~~~DiwslG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  316 (382)
T 3tt0_A          263 EALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPS  316 (382)
T ss_dssp             HHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCS
T ss_pred             HHhcCCC-CCchhHHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCc
Confidence            9998765 9999999999999999998 999999888777766666554444433

>3kfa_A Tyrosine-protein kinase ABL1; CML, drug resistance, inhibitor, ATP-binding, nucleotide-binding, oncogene, TRAN; HET: B91; 1.22A {Mus musculus} SCOP: d.144.1.7 PDB: 2qoh_A* 3kf4_A* 3k5v_A* 1fpu_A* 1m52_A* 1iep_A* 2hzn_A* 1opj_A* 3ms9_A* 3mss_A* 3ik3_A* 2z60_A* 2e2b_A* 3pyy_A* 3oxz_A* 2g1t_A* 3ue4_A* 3oy3_A* 2hiw_A* 2v7a_A* ...

Probab=99.95  E-value=1.8e-27  Score=184.02  Aligned_cols=171  Identities=17%  Similarity=0.218  Sum_probs=129.9

Q ss_pred             cccccc-cCC-cccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSK-WSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~-~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ ..+ ....+++|..  .....+.+.+|++++++++||||+++++++        .++...++++|++.+++|.
T Consensus        26 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~~v~e~~~~~~L~   97 (288)
T 3kfa_A           26 YGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVC--------TREPPFYIITEFMTYGNLL   97 (288)
T ss_dssp             TCSEEEEEEGGGTEEEEEEEECSCSTHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSEEEEEECCTTEEHH
T ss_pred             ceeEEEeEecCCCEEEEEEecCcCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------ccCCCEEEEEEcCCCCcHH
Confidence            677887 222 1223334432  334557789999999999999999999986        4466789999999999998


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          81 RFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        81 ~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      .+.          ..+..++ .|++.||.|||+.+       |+|+       +||+|||++..            .++.
T Consensus        98 ~~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~i~H~dikp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~  176 (288)
T 3kfa_A           98 DYLRECNRQEVSAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI  176 (288)
T ss_dssp             HHHHHCCTTTSCHHHHHHHH-HHHHHHHHHHHHHTCCCSCCSGGGEEECGGGCEEECCCCGGGTSCSSSSEEETTEEECG
T ss_pred             HHHHhcccCCccHhHHHHHH-HHHHHHHHHHHHCCccCCCCCcceEEEcCCCCEEEccCccceeccCCccccccCCcccc
Confidence            763          3455666 79999999999998       6666       59999998642            2355


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      .|  +|||.+.+.. ++.++|+||+|+++|+|++ |.+||.+.+.......+......+.+..+
T Consensus       177 ~y--~aPE~~~~~~-~~~~~Di~slG~il~~ll~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~  237 (288)
T 3kfa_A          177 KW--TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGC  237 (288)
T ss_dssp             GG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCCCTTC
T ss_pred             Cc--CChhhhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhccCCCCCCCCC
Confidence            69  9999998765 8999999999999999999 99999887766666655555444444433

>1u5q_A Serine/threonine protein kinase TAO2; transferase; HET: SEP; 2.10A {Rattus norvegicus} SCOP: d.144.1.7 PDB: 1u5r_A* 2gcd_A*

Probab=99.95  E-value=1.3e-27  Score=190.51  Aligned_cols=163  Identities=21%  Similarity=0.238  Sum_probs=124.2

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...   .....+.+.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        67 ~g~Vy~a~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~--------~~~~~~~lv~e~~~g  138 (348)
T 1u5q_A           67 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY--------LREHTAWLVMEYCLG  138 (348)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEESCSSCHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCSE
T ss_pred             CEEEEEEEEccCCeEEEEEEEccccccchHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------EECCeEEEEEecCCC
Confidence            678887 2    222334433321   233446788999999999999999999986        345678999999985


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------cccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCT  127 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~  127 (188)
                      +....+        ...+..++ .|++.||.|||+++       |+||       +||+|||++.       ..||+.| 
T Consensus       139 ~l~~~l~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~gt~~y-  216 (348)
T 1u5q_A          139 SASDLLEVHKKPLQEVEIAAVT-HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYW-  216 (348)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGG-
T ss_pred             CHHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeCCCCHHHEEECCCCCEEEeeccCceecCCCCcccCCcce-
Confidence            443333        23456677 89999999999998       6666       5999999864       4678899 


Q ss_pred             CCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         128 RGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       128 ~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                       +|||++..  ...++.++|||||||++|||++|++||.+.+....+..+.+.
T Consensus       217 -~aPE~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~~~~~~~~~~~~~~~~  268 (348)
T 1u5q_A          217 -MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQN  268 (348)
T ss_dssp             -CCHHHHHTTSSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHS
T ss_pred             -eCHhhhccccCCCCCcHHHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhc
Confidence             99999852  234899999999999999999999999888877766666543

>2b9h_A MAP kinase FUS3, mitogen-activated protein kinase FUS3; transferase; HET: ADP; 1.55A {Saccharomyces cerevisiae} PDB: 2b9i_A* 2b9j_A* 2f49_A 2fa2_A 2b9f_A* 2f9g_A*

Probab=99.95  E-value=3.1e-27  Score=187.66  Aligned_cols=172  Identities=25%  Similarity=0.415  Sum_probs=132.4

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .......+.+|++++++++||||+++++++..   .........++++|++.+ +
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~---~~~~~~~~~~lv~e~~~~-~   99 (353)
T 2b9h_A           24 YGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLREIKILKHFKHENIITIFNIQRP---DSFENFNEVYIIQELMQT-D   99 (353)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCCSSHHHHHHHHHHHHHHHHCCCTTBCCEEEECCC---SCSTTCCCEEEEECCCSE-E
T ss_pred             CeEEEEEEECCCCcEEEEEeecccccchHHHHHHHHHHHHHhCcCCCcCCeeeeecc---cccCccceEEEEEeccCc-c
Confidence            677887 2    223334444332 33445678899999999999999999998532   122334678999999974 6


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------------
Q psy7174          79 KARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------------  119 (188)
Q Consensus        79 l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------------  119 (188)
                      +..+       ...+..++ .|++.||.|||+++       |+||       +||+|||++.                  
T Consensus       100 L~~~~~~~~~~~~~~~~~~-~qi~~~L~~LH~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~  178 (353)
T 2b9h_A          100 LHRVISTQMLSDDHIQYFI-YQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSG  178 (353)
T ss_dssp             HHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECC---------------
T ss_pred             HHHHHhhcCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHeEEcCCCcEEEEecccccccccccccccCccccccc
Confidence            6654       34566677 89999999999998       6666       5999999754                  


Q ss_pred             ---ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         120 ---HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                         ..||..|  +|||++.....++.++||||+||++|+|++|++||.+.+..+.+..+....+.|.
T Consensus       179 ~~~~~gt~~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~  243 (353)
T 2b9h_A          179 MVEFVATRWY--RAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFPGRDYRHQLLLIFGIIGTPH  243 (353)
T ss_dssp             -CCCCCCGGG--CCHHHHHSCCCCCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             hhhccccccc--cCCeeeccCCCccchhhHHHHHHHHHHHHhCCCCCCCCCcHHHHHHHHHHhCCCc
Confidence               2468889  9999987644589999999999999999999999999998888888877776654

>1mqb_A Ephrin type-A receptor 2; tyrosine protein kinase, transferase; HET: ANP; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.7e-27  Score=187.34  Aligned_cols=151  Identities=15%  Similarity=0.177  Sum_probs=121.0

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQIL   95 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~   95 (188)
                      ......+.+|++++++++||||+++++++        .+....+++|||+.+++|..+.         ..+..++ .|++
T Consensus        87 ~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~i~-~qi~  157 (333)
T 1mqb_A           87 EKQRVDFLGEAGIMGQFSHHNIIRLEGVI--------SKYKPMMIITEYMENGALDKFLREKDGEFSVLQLVGML-RGIA  157 (333)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSEEEEEECCTTEEHHHHHHHTTTCSCHHHHHHHH-HHHH
T ss_pred             HHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------ecCCCcEEEEeCCCCCcHHHHHHhCCCCCCHHHHHHHH-HHHH
Confidence            34556788999999999999999999986        4456789999999999998863         3455666 7999


Q ss_pred             HHHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCCCCchhHHH
Q psy7174          96 EGLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus        96 ~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      .||.|||+.+       |+||       +||+|||++..              .++..|  +|||++.+.. ++.++|||
T Consensus       158 ~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~  234 (333)
T 1mqb_A          158 AGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRW--TAPEAISYRK-FTSASDVW  234 (333)
T ss_dssp             HHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC-----------------CCCGGG--SCHHHHHSCC-CCHHHHHH
T ss_pred             HHHHHHHhCCeeCCCCChheEEECCCCcEEECCCCcchhhccccccccccCCCCccccc--cCchhcccCC-CCchhhhH
Confidence            9999999998       5565       59999998652              234568  9999998755 89999999


Q ss_pred             HHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         148 AVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       148 slG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      |+||++|++++ |+.||.+.+..+....+......|.+..+
T Consensus       235 slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~  275 (333)
T 1mqb_A          235 SFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDC  275 (333)
T ss_dssp             HHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTC
T ss_pred             HHHHHHHHHHcCCCCCcccCCHHHHHHHHHCCCcCCCcccC
Confidence            99999999998 99999888877777777665555544433

>3poz_A Epidermal growth factor receptor; kinase domain, anti-oncogene, ATP-binding, cell cycle, disea mutation, glycoprotein, membrane, nucleotide-binding; HET: 03P; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 2itx_A* 2ity_A* 2j5f_A* 2j6m_A* 2itw_A* 1m14_A 1m17_A* 3vjo_A* 2gs6_A* 2gs2_A* 2rf9_A 4g5j_A* 1xkk_A* 2eb2_A 3gop_A 2eb3_A* 2itn_A* 2ito_A* 2itp_A* 2itq_A* ...

Probab=99.95  E-value=8.9e-28  Score=189.55  Aligned_cols=168  Identities=13%  Similarity=0.144  Sum_probs=125.8

Q ss_pred             cccccc-c----CCccc-ccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSP-NTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~-~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..+ .+++|..    .....+.+.+|++++++++||||++++++|.         ....++++|++
T Consensus        28 ~g~Vy~~~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~---------~~~~~~v~e~~   98 (327)
T 3poz_A           28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL---------TSTVQLITQLM   98 (327)
T ss_dssp             TEEEEEEEECC----CCEEEEEEEC-------CHHHHHHHHHHHHHCCBTTBCCEEEEEE---------SSSEEEEEECC
T ss_pred             CeEEEEEEEcCCCceEEEEEEEeecccccCHHHHHHHHHHHHHHHhCCCCCEeEEEEEEe---------cCCeEEEEEec
Confidence            678887 2    22222 2244432    3345578899999999999999999999862         23478999999


Q ss_pred             ccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------
Q psy7174          75 TKTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        75 ~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------  119 (188)
                      .+|++..+.         ..+..++ .|++.||.|||+++       |+||       +||+|||++.            
T Consensus        99 ~~g~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~ivH~Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~  177 (327)
T 3poz_A           99 PFGCLLDYVREHKDNIGSQYLLNWC-VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE  177 (327)
T ss_dssp             TTCBHHHHHHHSTTSCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTHHHHHTTTCC-----
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHhhCCeeCCCCChheEEECCCCCEEEccCcceeEccCCccccccc
Confidence            999998763         3455666 79999999999998       6676       5999999754            


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                       ..+|..|  +|||.+.+.. ++.++|||||||++|++++ |+.||.+.+.......+......+.+.
T Consensus       178 ~~~~t~~y--~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  242 (327)
T 3poz_A          178 GGKVPIKW--MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPP  242 (327)
T ss_dssp             --CCCGGG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT
T ss_pred             CCCccccc--cChHHhccCC-CCchhhhhhhHHHHHHHHhcCCCCccCCCHHHHHHHHHcCCCCCCCc
Confidence             2345679  9999998765 9999999999999999999 999998877766655555554444443

>3is5_A Calcium-dependent protein kinase; CDPK, structural genomics, parasitology, structural genomics consortium, SGC, ATP-binding, nucleotide-binding; HET: ANP; 2.55A {Toxoplasma gondii}

Probab=99.95  E-value=3.1e-27  Score=182.99  Aligned_cols=157  Identities=18%  Similarity=0.169  Sum_probs=121.1

Q ss_pred             cccccc-cC----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ ..    +..++|.+.+. .....+.+.+|++++++++||||+++++++        .+....++++||+.+++
T Consensus        35 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~  106 (285)
T 3is5_A           35 FGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLDHPNIIKIFEVF--------EDYHNMYIVMETCEGGE  106 (285)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEGGGCCSCHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEECCCSCCB
T ss_pred             CeEEEEEEEccCCceEEEEEeeccccchhHHHHHHHHHHHHhCCCchHHhHHHhe--------ecCCeEEEEEEeCCCCc
Confidence            688887 22    22334433332 233457789999999999999999999986        34567899999999999


Q ss_pred             HHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------
Q psy7174          79 KARFY------------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------  119 (188)
Q Consensus        79 l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------  119 (188)
                      +....            ..+..++ .|++.||.|||+.+       |+||          +||+|||++.          
T Consensus       107 L~~~l~~~~~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivH~dikp~NIl~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~  185 (285)
T 3is5_A          107 LLERIVSAQARGKALSEGYVAELM-KQMMNALAYFHSQHVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEHSTN  185 (285)
T ss_dssp             HHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCSGGGEEESSSSTTCCEEECCCCCCCC---------
T ss_pred             HHHHHHhhhhcccCCCHHHHHHHH-HHHHHHHHHHHhCCEEECCCCHHHEEEecCCCCCCEEEEeeecceecCCcccCcC
Confidence            87642            3355666 89999999999998       5555          5999999864          


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHH
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTR  174 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~  174 (188)
                      ..+|..|  +|||++.. . ++.++||||+||++|+|++|+.||.+.+..+....
T Consensus       186 ~~~t~~y--~aPE~~~~-~-~~~~~Di~slG~il~~ll~g~~pf~~~~~~~~~~~  236 (285)
T 3is5_A          186 AAGTALY--MAPEVFKR-D-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQK  236 (285)
T ss_dssp             -CTTGGG--CCHHHHTT-C-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHH
T ss_pred             cccccCc--CChHHhcc-C-CCcccCeehHHHHHHHHHhCCCCCCCCCHHHHHhh
Confidence            4578889  99999864 3 89999999999999999999999987765444433

>3ugc_A Tyrosine-protein kinase JAK2; small molecule inhibitor, ATP binding, transferase-transfera inhibitor complex; HET: 046; 1.34A {} PDB: 3krr_A* 3lpb_A* 4aqc_A* 4e4m_A* 4f08_A* 4f09_A* 3q32_A* 3rvg_A* 4hge_A* 3tjc_A* 3tjd_A* 4bbe_A* 4bbf_A* 2b7a_A* 3fup_A* 3e64_A* 3e62_A* 3e63_A* 2xa4_A* 3iok_A* ...

Probab=99.95  E-value=8.3e-28  Score=186.73  Aligned_cols=139  Identities=16%  Similarity=0.235  Sum_probs=111.3

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLR   87 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~   87 (188)
                      +|.+........+.+.+|++++++++||||+++++++..      .+....+++|||+.+++|..+.         ..+.
T Consensus        44 vK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  117 (295)
T 3ugc_A           44 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS------AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL  117 (295)
T ss_dssp             EEEESCCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEECH------HHHTSCEEEEECCTTCBHHHHHHHCGGGCCHHHHH
T ss_pred             EEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEec------CCCCceEEEEEeCCCCCHHHHHHhcccccCHHHHH
Confidence            443333445556788999999999999999999998632      2335689999999999998863         3455


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~  139 (188)
                      .++ .|++.||.|||+.+       |+|+       +||+|||++..              .++..|  +|||.+.+.. 
T Consensus       118 ~~~-~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-  193 (295)
T 3ugc_A          118 QYT-SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFW--YAPESLTESK-  193 (295)
T ss_dssp             HHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCSCC-------------CTTCGGGG--CCHHHHHHCC-
T ss_pred             HHH-HHHHHHHHHHhcCCcccCCCCHhhEEEcCCCeEEEccCcccccccCCcceeeeccCCCCccce--eCcHHhcCCC-
Confidence            566 79999999999998       6666       59999998652              234558  9999998765 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      ++.++||||+|+++|++++|..|+..
T Consensus       194 ~~~~~Di~slG~~l~~l~~g~~~~~~  219 (295)
T 3ugc_A          194 FSVASDVWSFGVVLYELFTYIEKSKS  219 (295)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTTCTTCS
T ss_pred             CChHHHHHHHHHHHHHHHhcccccCC
Confidence            99999999999999999999988754

>2qr7_A Ribosomal protein S6 kinase alpha-3; kinase domain, RSK2, autoinhibitory, ATP-binding, nucleotide phosphorylation, serine/threonine-protein kinase; 2.00A {Mus musculus} PDB: 2qr8_A 4d9t_A* 4d9u_A* 3rny_A 2wnt_A

Probab=99.95  E-value=5.1e-28  Score=192.44  Aligned_cols=157  Identities=15%  Similarity=0.144  Sum_probs=120.6

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+.+.    .....+|++++.++ +||||+++++++        .++...+++|||+.+|+
T Consensus        35 ~g~V~~~~~~~~~~~~avK~~~~~----~~~~~~E~~~l~~~~~hp~iv~~~~~~--------~~~~~~~lv~E~~~gg~  102 (342)
T 2qr7_A           35 YSVCKRCIHKATNMEFAVKIIDKS----KRDPTEEIEILLRYGQHPNIITLKDVY--------DDGKYVYVVTELMKGGE  102 (342)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEETT----TCCCHHHHHHHHHHTTSTTBCCEEEEE--------ECSSEEEEEECCCCSCB
T ss_pred             CEEEEEEEECCCCCEEEEEEEEcc----cCChHHHHHHHHHhcCCCCcCeEEEEE--------EcCCEEEEEEeCCCCCc
Confidence            677887 2    223334444332    23456799999887 799999999986        45678899999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc-----------cc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~-----------~~  121 (188)
                      +...        +..+..++ .|++.||.|||+++       |+||           +||+|||++.           ..
T Consensus       103 L~~~i~~~~~~~~~~~~~~~-~qi~~al~~lH~~givHrDlkp~NIl~~~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  181 (342)
T 2qr7_A          103 LLDKILRQKFFSEREASAVL-FTITKTVEYLHAQGVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPC  181 (342)
T ss_dssp             HHHHHHTCTTCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEESSSSCSGGGEEECCCTTCEECBCTTCCBCCSS
T ss_pred             HHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCcEeccCCHHHEEEecCCCCcCeEEEEECCCcccCcCCCCceeccC
Confidence            8775        34566777 89999999999998       5555           5999999754           35


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC---ChHHHHHHHHh
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE---SDLDQLTRIFQ  177 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~---~~~~~~~~i~~  177 (188)
                      ||+.|  +|||++.+.. |+.++||||+||++|+|++|.+||.+.   +..+.+..|..
T Consensus       182 gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~Pf~~~~~~~~~~~~~~i~~  237 (342)
T 2qr7_A          182 YTANF--VAPEVLERQG-YDAACDIWSLGVLLYTMLTGYTPFANGPDDTPEEILARIGS  237 (342)
T ss_dssp             CCSSC--CCHHHHHHHH-HHHHHHHHHHHHHHHHHHHSSCSSCSSTTSCHHHHHHHHHH
T ss_pred             CCccc--cCHHHhcCCC-CCCccCeeeHhHHHHHHhcCCCCCCCCCcCCHHHHHHHHcc
Confidence            68889  9999998755 899999999999999999999999763   34444555543

>4exu_A Mitogen-activated protein kinase 13; P38 kinase, transferase; 1.70A {Homo sapiens} PDB: 4eyj_A* 4eym_A* 3coi_A

Probab=99.95  E-value=2.7e-27  Score=189.90  Aligned_cols=173  Identities=25%  Similarity=0.388  Sum_probs=132.7

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|+++++.++||||+++++++....  ........++++||+.+ 
T Consensus        55 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~niv~~~~~~~~~~--~~~~~~~~~lv~e~~~~-  131 (371)
T 4exu_A           55 YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS--SLRNFYDFYLVMPFMQT-  131 (371)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS--SSTTCCCCEEEEECCCE-
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccchhHHHHHHHHHHHHHhcCCCCchhhhhheeccC--CcccceeEEEEEccccc-
Confidence            678887 2    233344444432  3334577889999999999999999999863211  11112234999999984 


Q ss_pred             cHHHH------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCC
Q psy7174          78 TKARF------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRG  129 (188)
Q Consensus        78 ~l~~~------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~  129 (188)
                      ++...      +..+..++ .|++.||.|||+.+       |+||       +||+|||++.        ..+|..|  +
T Consensus       132 ~l~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~t~~y--~  208 (371)
T 4exu_A          132 DLQKIMGMEFSEEKIQYLV-YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWY--R  208 (371)
T ss_dssp             EHHHHTTSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECSTTCC--------CTTCCCTT--S
T ss_pred             cHHHHhhcCCCHHHHHHHH-HHHHHHHHHHHHCCCcCCCcCHHHeEECCCCCEEEEecCcccccccCcCCcccCccc--c
Confidence            55553      45666777 89999999999998       6666       6999999864        4678899  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      |||++.+...++.++||||+||++|+|++|+.||.+.+..+.+..+.+..+.|+
T Consensus       209 aPE~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  262 (371)
T 4exu_A          209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG  262 (371)
T ss_dssp             CHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             CHHHhcCCCCCCcHHhHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCCc
Confidence            999998744589999999999999999999999999999999999988777664

>3llt_A Serine/threonine kinase-1, pflammer; lammer kinase, malaria, structural GE structural genomics consortium, SGC, transferase; HET: ANP; 2.50A {Plasmodium falciparum 3D7}

Probab=99.95  E-value=1.9e-27  Score=189.58  Aligned_cols=165  Identities=17%  Similarity=0.289  Sum_probs=130.3

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCC-----CCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLD-----YANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~-----h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.+++ .....+.+.+|+++++.++     ||||+++++++        ......+++||++
T Consensus        48 ~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~h~~iv~~~~~~--------~~~~~~~lv~e~~  118 (360)
T 3llt_A           48 FGRVLLCQHIDNKKYYAVKVVRN-IKKYTRSAKIEADILKKIQNDDINNNNIVKYHGKF--------MYYDHMCLIFEPL  118 (360)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECS-CHHHHHHHHHHHHHHHHTCCCSTTGGGBCCEEEEE--------EETTEEEEEECCC
T ss_pred             CeEEEEEEECCCCeEEEEEEecc-chhhhhhhHHHHHHHHHhcccCCCCCCeeccccee--------eECCeeEEEEcCC
Confidence            677886 2    22333443332 2344567788999999997     99999999986        3356789999999


Q ss_pred             ccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------------------------
Q psy7174          75 TKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL----------------------------  109 (188)
Q Consensus        75 ~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------------------------  109 (188)
                       +++|..+          ...+..++ .|++.||.|||+.+       |+||                            
T Consensus       119 -~~~L~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~~  196 (360)
T 3llt_A          119 -GPSLYEIITRNNYNGFHIEDIKLYC-IEILKALNYLRKMSLTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRT  196 (360)
T ss_dssp             -CCBHHHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEESCTTCCEEEEEEECTTTCCEEEEEEE
T ss_pred             -CCCHHHHHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeCCCCcccEEEccccccccccchhccccccccccccc
Confidence             8888765          24466677 89999999999998       4443                            


Q ss_pred             ----EEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         110 ----KKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       110 ----lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                          +||+|||++.        ..||..|  +|||++.+.. ++.++||||+||++|+|++|++||.+.+..+.+..+..
T Consensus       197 ~~~~~kl~DFG~a~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~~~~~~~~~~~  273 (360)
T 3llt_A          197 KSTGIKLIDFGCATFKSDYHGSIINTRQY--RAPEVILNLG-WDVSSDMWSFGCVLAELYTGSLLFRTHEHMEHLAMMES  273 (360)
T ss_dssp             SCCCEEECCCTTCEETTSCCCSCCSCGGG--CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCEEEEeccCceecCCCCcCccCcccc--cCcHHHcCCC-CCCccchHHHHHHHHHHHHCCCCCCCCcHHHHHHHHHH
Confidence                5899999864        4578899  9999998866 99999999999999999999999999999888888877


Q ss_pred             hcCCCC
Q psy7174         178 TLGTPS  183 (188)
Q Consensus       178 ~~~~p~  183 (188)
                      ..+.++
T Consensus       274 ~~~~~p  279 (360)
T 3llt_A          274 IIQPIP  279 (360)
T ss_dssp             HTCCCC
T ss_pred             hcCCCC
Confidence            665544

>3t9t_A Tyrosine-protein kinase ITK/TSK; kinase domain, alpha/beta, ATP binding, phosphorylation, intracellular, transferase-transferase inhibitor complex; HET: IAQ; 1.65A {Homo sapiens} PDB: 3v5l_A* 3v5j_A* 3v8t_A* 3v8w_A* 1sm2_A* 1snu_A* 1snx_A 3qgw_A* 3qgy_A* 3miy_A* 3mj1_A* 3mj2_A*

Probab=99.95  E-value=4e-27  Score=180.08  Aligned_cols=167  Identities=14%  Similarity=0.151  Sum_probs=128.0

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.+... ....+.+.+|++++++++||||+++++++        .++...++++|++.+++|.
T Consensus        21 ~g~V~~~~~~~~~~vaiK~~~~~-~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~   91 (267)
T 3t9t_A           21 FGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVC--------LEQAPICLVTEFMEHGCLS   91 (267)
T ss_dssp             TEEEEEEEETTTEEEEEEEECTT-TBCHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSCEEEECCCTTCBHH
T ss_pred             ceeEEEEEecCCCeEEEEEcccc-CCCHHHHHHHHHHHHhCCCCCEeeEEEEE--------ccCCCeEEEEeCCCCCcHH
Confidence            677777 2   122234433332 22346789999999999999999999986        3456789999999999998


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------ccccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTLY  125 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~~  125 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++..            .++..
T Consensus        92 ~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~  170 (267)
T 3t9t_A           92 DYLRTQRGLFAAETLLGMC-LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK  170 (267)
T ss_dssp             HHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSSCCGGGEEECGGGCEEECCTTGGGGBCCHHHHSTTSTTCCGG
T ss_pred             HHHhhCcccCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCchheEEECCCCCEEEccccccccccccccccccccccccc
Confidence            763         3455566 79999999999998       6666       59999998652            34556


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      |  +|||++.+.. ++.++|+||+|+++|+|++ |++||.+.+..+....+......+.+
T Consensus       171 y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~~g~~p~~~~~~~~~~~~i~~~~~~~~~  227 (267)
T 3t9t_A          171 W--ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKP  227 (267)
T ss_dssp             G--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCC
T ss_pred             c--cChhhhcCCC-ccchhchhhhHHHHHHHhccCCCCCCCCCHHHHHHHHhcCCcCCCC
Confidence            8  9999998755 8999999999999999999 89999988877777666655443333

>3cc6_A Protein tyrosine kinase 2 beta; focal adhesion kinase, structural genomics, structural genom consortium, SGC, ATP-binding, membrane; 1.60A {Homo sapiens} PDB: 3fzs_A* 3et7_A 3fzo_A* 3fzr_A* 3fzp_A* 3fzt_A* 3h3c_A*

Probab=99.95  E-value=3.8e-27  Score=181.80  Aligned_cols=168  Identities=14%  Similarity=0.173  Sum_probs=125.9

Q ss_pred             cccccc-c---CC-c---ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q---SK-W---SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~---~~-~---~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .   .+ .   .++|.+.+. ..+..+.+.+|++++++++||||+++++++         .+...++++|++.
T Consensus        25 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~---------~~~~~~~v~e~~~   95 (281)
T 3cc6_A           25 FGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLIGII---------EEEPTWIIMELYP   95 (281)
T ss_dssp             SSEEEEEEEECTTCCEEEEEEEECCTTSCHHHHHHHHHHHHHHHHHCCTTBCCEEEEE---------CSSSCEEEEECCT
T ss_pred             CeeEEEeEEcCCCCCcceEEEEecccccCchHHHHHHHHHHHHHhCCCCCcceEEEEE---------cCCCCEEEEecCC
Confidence            677886 1   11 1   224433332 345567889999999999999999999984         2345699999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------  120 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------  120 (188)
                      +++|..+.         ..+..++ .|++.||.|||+++       |+|+       +||+|||++..            
T Consensus        96 ~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  174 (281)
T 3cc6_A           96 YGELGHYLERNKNSLKVLTLVLYS-LQICKAMAYLESINCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVT  174 (281)
T ss_dssp             TCBHHHHHHHHTTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCSGGGEEEEETTEEEECCCCGGGCC---------CC
T ss_pred             CCCHHHHHHhccccCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCccceEEECCCCcEEeCccCCCcccccccccccccC
Confidence            99998763         3355566 79999999999988       6666       59999997642            


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .++..|  +|||++.+.. ++.++||||||+++|+|++ |+.||...+..+....+......+.+.
T Consensus       175 ~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~llt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  237 (281)
T 3cc6_A          175 RLPIKW--MSPESINFRR-FTTASDVWMFAVCMWEILSFGKQPFFWLENKDVIGVLEKGDRLPKPD  237 (281)
T ss_dssp             CCCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCGGGHHHHHHHTCCCCCCT
T ss_pred             CCCcce--eCchhhccCC-CCchhccHHHHHHHHHHHhCCCCCcccCChHHHHHHHhcCCCCCCCC
Confidence            345579  9999997655 8999999999999999998 999998766655555554444444333

>1u59_A Tyrosine-protein kinase ZAP-70; transferase; HET: STU; 2.30A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=2.5e-27  Score=183.47  Aligned_cols=169  Identities=15%  Similarity=0.122  Sum_probs=129.7

Q ss_pred             cccccc-c------CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q------SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~------~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .      +...++|.++.. .....+.+.+|++++++++||||+++++++         .....++++|++.+
T Consensus        23 ~g~Vy~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~---------~~~~~~lv~e~~~~   93 (287)
T 1u59_A           23 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC---------QAEALMLVMEMAGG   93 (287)
T ss_dssp             TEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---------ESSSEEEEEECCTT
T ss_pred             ceeEEEeEeccCCCcceEEEEecCCccchhHHHHHHHHHHHHHhCCCCCEeEEEEEe---------cCCCcEEEEEeCCC
Confidence            677776 2      112234444432 344567789999999999999999999985         23468999999999


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------  120 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------  120 (188)
                      ++|..+         ...+..++ .|++.||.|||+.+       |+||       +||+|||++..             
T Consensus        94 ~~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  172 (287)
T 1u59_A           94 GPLHKFLVGKREEIPVSNVAELL-HQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  172 (287)
T ss_dssp             EEHHHHHTTCTTTSCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             CCHHHHHHhCCccCCHHHHHHHH-HHHHHHHHHHHHCCEeeCCCchheEEEcCCCCEEECcccceeeeccCcceeecccc
Confidence            999875         34566677 89999999999998       6666       59999998642             


Q ss_pred             -cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         121 -VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       121 -~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                       .+|..|  +|||++.+.. ++.++|+||+|+++|+|++ |+.||.+.+..+....+......+.+..
T Consensus       173 ~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~i~~~~~~~~~~~  237 (287)
T 1u59_A          173 GKWPLKW--YAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPE  237 (287)
T ss_dssp             SCCCGGG--CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTT
T ss_pred             ccccccc--cCHHHhccCC-CCchhhHHHHHHHHHHHHcCCCCCcccCCHHHHHHHHhcCCcCCCCCC
Confidence             235678  9999997655 8999999999999999998 9999998887777766665544444433

>4fvq_A Tyrosine-protein kinase JAK2; janus protein kinase, pseudokinase, ATP binding, phosphoryla transferase; HET: ATP; 1.75A {Homo sapiens} PDB: 4fvp_A* 4fvr_A*

Probab=99.95  E-value=3.9e-27  Score=182.18  Aligned_cols=145  Identities=11%  Similarity=0.128  Sum_probs=114.7

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLR   87 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~   87 (188)
                      +|.+.+......+.+.+|++++++++||||+++++++        .++...+++|||+.+++|..+.         ..+.
T Consensus        45 ~K~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  116 (289)
T 4fvq_A           45 LKVLDKAHRNYSESFFEAASMMSKLSHKHLVLNYGVC--------VCGDENILVQEFVKFGSLDTYLKKNKNCINILWKL  116 (289)
T ss_dssp             EEEECGGGGGGHHHHHHHHHHHHTSCCTTBCCEEEEE--------CCTTCCEEEEECCTTCBHHHHHHHTGGGCCHHHHH
T ss_pred             hhhcccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE--------EeCCCCEEEEECCCCCCHHHHHHhCCCCCCHHHHH
Confidence            4444344455667899999999999999999999986        3456789999999999998863         3355


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe---------------EEEecCCccc-------ccccccccCCCCccccccC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL---------------KKFVGIGIGR-------HVCTLYCTRGAPELLFGAR  138 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i---------------lkl~dfg~~~-------~~~~~~y~~~aPe~~~~~~  138 (188)
                      .++ .|++.||.|||+++       |+||               +|++|||++.       ..++..|  +|||++.+..
T Consensus       117 ~i~-~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~y--~aPE~~~~~~  193 (289)
T 4fvq_A          117 EVA-KQLAAAMHFLEENTLIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQERIPW--VPPECIENPK  193 (289)
T ss_dssp             HHH-HHHHHHHHHHHHTTCCCCCCCGGGEEEEECCBGGGTBCCEEEECCCCSCTTTSCHHHHHHTTTT--SCHHHHHCGG
T ss_pred             HHH-HHHHHHHHHHhhCCeECCCcCcceEEEecCCcccccccceeeeccCcccccccCccccCCcCcc--cCHHHhCCCC
Confidence            566 79999999999998       4444               6899999865       3467889  9999998744


Q ss_pred             CCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHH
Q psy7174         139 MYGVGIDMWAVGCIICELLLK-APFLPGESDLDQL  172 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~  172 (188)
                      .++.++||||+||++|+|++| .+|+...+.....
T Consensus       194 ~~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~  228 (289)
T 4fvq_A          194 NLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKL  228 (289)
T ss_dssp             GCCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHH
T ss_pred             CCCchhHHHHHHHHHHHHHcCCCCCccccchHHHH
Confidence            589999999999999999995 5666655554443

>3uim_A Brassinosteroid insensitive 1-associated receptor; kinase, protein kinase, transferase; HET: SEP TPO ANP; 2.20A {Arabidopsis thaliana} PDB: 3ulz_A* 3tl8_A*

Probab=99.95  E-value=8.3e-28  Score=189.17  Aligned_cols=148  Identities=14%  Similarity=0.124  Sum_probs=116.8

Q ss_pred             cccccc-c---CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .   ++..++|.+... .......+.+|+++++.++||||+++++++        .++...++++||+.+++|
T Consensus        43 ~g~V~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L  114 (326)
T 3uim_A           43 FGKVYKGRLADGTLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC--------MTPTERLLVYPYMANGSV  114 (326)
T ss_dssp             SSEEEEECCSSSCCEEEEECCC-----CCCHHHHHHHGGGTCCCTTBCCCCEEE--------CCSSCCEEEEECCTTCBH
T ss_pred             CcEEEEEEecCCCEEEEEEeccccCchHHHHHHHHHHHHHhccCCCccceEEEE--------ecCCceEEEEEeccCCCH
Confidence            677887 2   233334444432 223344789999999999999999999986        446678999999999999


Q ss_pred             HHHH------------HHHHHHHHHHHHHHHHHHhhc---C-------CCCe-------EEEecCCccc-----------
Q psy7174          80 ARFY------------SHLRYLENQQILEGLQALKSS---M-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        80 ~~~~------------~~~~~~~~~qi~~gl~~lH~~---~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      ..+.            ..+..++ .|++.||.|||+.   +       |+||       +||+|||++.           
T Consensus       115 ~~~l~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~~~ivH~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  193 (326)
T 3uim_A          115 ASCLRERPESQPPLDWPKRQRIA-LGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDTHVTT  193 (326)
T ss_dssp             HHHHHCCSTTCCCCCHHHHHHHH-HHHHHHHHHHHHSSSSCEECCCCSGGGEEECTTCCEEECCCSSCEECCSSSSCEEC
T ss_pred             HHHHHhccccCCCCCHHHHHHHH-HHHHHHHHHHHhCCCCCeEeCCCchhhEEECCCCCEEeccCccccccCcccccccc
Confidence            8763            3455666 7999999999998   7       6666       5999999864           


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                       ..||..|  +|||++.+.. ++.++||||+||++|+|++|+.||.
T Consensus       194 ~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~  236 (326)
T 3uim_A          194 AVRGTIGH--IAPEYLSTGK-SSEKTDVFGYGVMLLELITGQRAFD  236 (326)
T ss_dssp             CCCSCGGG--CCHHHHHHSE-ECHHHHHHHHHHHHHHHHHCCCSBC
T ss_pred             cccCCcCc--cCHHHhccCC-CCccccchhHHHHHHHHHhCCCccc
Confidence             2378889  9999997765 8999999999999999999999994

>3qup_A Tyrosine-protein kinase receptor TYRO3; protein kinase inhibitor, receptor tyrosine kinase, spirocyc kinase domain, phosphotransfer, GAS6 ligand; HET: LUN; 1.90A {Mus musculus}

Probab=99.95  E-value=2e-27  Score=186.74  Aligned_cols=175  Identities=13%  Similarity=0.096  Sum_probs=124.2

Q ss_pred             cccccc-cCC-------cccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-QSK-------WSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~~~-------~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ ..+       ..++|.++..  .....+.+.+|++++++++||||+++++++....  ........++++||+
T Consensus        36 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~~v~e~~  113 (323)
T 3qup_A           36 FGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDHPHVAKLVGVSLRSR--AKGRLPIPMVILPFM  113 (323)
T ss_dssp             TEEEEEEEC-------CEEEEEEC------CHHHHHHHHHHHHHTTCCCTTBCCCCEEEECC---------CEEEEEECC
T ss_pred             CeEEEEEEEcccCCcceeEEEEEecccccCHHHHHHHHHHHHHHHHCCCCceehhhceeeccc--cccCCCccEEEEEec
Confidence            677886 211       2234444332  3445678899999999999999999999863211  000112238999999


Q ss_pred             ccccHHHHH--------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------
Q psy7174          75 TKTTKARFY--------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------  120 (188)
Q Consensus        75 ~~~~l~~~~--------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------  120 (188)
                      .+++|..+.              ..+..++ .|++.||.|||+.+       |+||       +||+|||++..      
T Consensus       114 ~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~-~qi~~al~~LH~~~ivH~Dikp~NIli~~~~~~kl~Dfg~a~~~~~~~~  192 (323)
T 3qup_A          114 KHGDLHAFLLASRIGENPFNLPLQTLVRFM-VDIACGMEYLSSRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDY  192 (323)
T ss_dssp             TTCBHHHHHHHHHC---CCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC---------
T ss_pred             cCCcHHHHHHhhhccccccccCHHHHHHHH-HHHHHHHHHHHcCCcccCCCCcceEEEcCCCCEEEeecccccccccccc
Confidence            999998763              3455666 79999999999998       6666       69999998642      


Q ss_pred             -------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         121 -------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       121 -------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                             .++..|  +|||.+.+.. ++.++||||+||++|++++ |.+||.+.+..+....+......+.+.
T Consensus       193 ~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  262 (323)
T 3qup_A          193 YRQGCASKLPVKW--LALESLADNL-YTVHSDVWAFGVTMWEIMTRGQTPYAGIENAEIYNYLIGGNRLKQPP  262 (323)
T ss_dssp             --------CCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCT
T ss_pred             ccccccccCcccc--cCchhhcCCC-CCCccchhhHHHHHHHHHhCCCCCccccChHHHHHHHhcCCCCCCCC
Confidence                   235568  9999998765 9999999999999999999 999999887766666665544444433

>3pg1_A Mitogen-activated protein kinase, putative (MAP K protein); EPK Ser/Thr protein kinase fold, Ser/Thr protein kinase, TRA; 1.95A {Leishmania major} PDB: 3uib_A*

Probab=99.95  E-value=2.6e-27  Score=188.89  Aligned_cols=149  Identities=22%  Similarity=0.415  Sum_probs=119.7

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQA  100 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~  100 (188)
                      +.+.+|++++++++||||+++++++...   ........++++||+.++.+..+        ...+..++ .|++.||.|
T Consensus        74 ~~~~~E~~~l~~l~h~~iv~~~~~~~~~---~~~~~~~~~lv~e~~~~~l~~~~~~~~~~~~~~~~~~~~-~qi~~~l~~  149 (362)
T 3pg1_A           74 KRVLREIRLLNHFHHPNILGLRDIFVHF---EEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFM-YHILLGLHV  149 (362)
T ss_dssp             HHHHHHHHHHHHCCCTTBCCCSEEEEEC---CTTTCCEEEEEEECCSEEHHHHHHCTTSCCCHHHHHHHH-HHHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCcCccceeeeEEec---cCCCcceEEEEEccCCCCHHHHHHhcccCCCHHHHHHHH-HHHHHHHHH
Confidence            6789999999999999999999986432   11334567999999986444433        34566677 899999999


Q ss_pred             HhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         101 LKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       101 lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                      ||+.+       |+||       +||+|||++.          ..+|..|  +|||++.+...++.++||||+||++|++
T Consensus       150 lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~t~~y--~aPE~~~~~~~~~~~~DiwslG~il~~l  227 (362)
T 3pg1_A          150 LHEAGVVHRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWY--RAPELVMQFKGFTKLVDMWSAGCVMAEM  227 (362)
T ss_dssp             HHHTTCCCCCCCGGGEEECTTCCEEECCTTC---------------CGGG--CCHHHHTTCTTCCTHHHHHHHHHHHHHH
T ss_pred             HHHCcCEecCCChHHEEEcCCCCEEEEecCcccccccccccceeccccee--cCcHHhcCCCCCCcHhHHHhHHHHHHHH
Confidence            99998       6666       5999999864          4578889  9999987745589999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      ++|+.||.+.+..+.+..+.+..+.|.
T Consensus       228 ~~g~~pf~~~~~~~~~~~i~~~~~~~~  254 (362)
T 3pg1_A          228 FNRKALFRGSTFYNQLNKIVEVVGTPK  254 (362)
T ss_dssp             HHSSCSCCCSSHHHHHHHHHHHHCCCC
T ss_pred             HhCCCCCCCCCHHHHHHHHHHHcCCCC
Confidence            999999999999999999988777654

>3c1x_A Hepatocyte growth factor receptor; receptor tyrosine kinase, signal transduction, GRB2, SHC, ATP-binding, glycoprotein, membrane; HET: CKK; 2.17A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=9.5e-28  Score=192.98  Aligned_cols=171  Identities=19%  Similarity=0.245  Sum_probs=124.5

Q ss_pred             cccccc-c---CC----cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q---SK----WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~---~~----~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .   +.    ..++|.+++. .....+++.+|++++++++||||+++++++.       ..+...++++||+.
T Consensus       102 fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~~-------~~~~~~~lv~e~~~  174 (373)
T 3c1x_A          102 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-------RSEGSPLVVLPYMK  174 (373)
T ss_dssp             SSEEEEEEEEETTTEEEEEEEEECCSCSCSHHHHHHHHHHTTSTTCCCTTBCCCCEEEC-------CCSSCCEEEEECCT
T ss_pred             CeEEEEEEEECCCCcEEEEEEEEcCCCCCHHHHHHHHHHHHHHHhCCCCCcceEEEEEE-------cCCCCeEEEEECCC
Confidence            788886 1   11    1234444332 3455678999999999999999999999752       23457799999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------  120 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------  120 (188)
                      +++|..+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++..            
T Consensus       175 ~g~L~~~l~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~NIll~~~~~~kL~DFG~a~~~~~~~~~~~~~~  253 (373)
T 3c1x_A          175 HGDLRNFIRNETHNPTVKDLIGFG-LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK  253 (373)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------
T ss_pred             CCCHHHHHhhcccCCCHHHHHHHH-HHHHHHHHHHHHCCEecCccchheEEECCCCCEEEeecccccccccccccccccc
Confidence            99998863         3455666 79999999999998       6666       59999998642            


Q ss_pred             ---cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         121 ---VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       121 ---~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                         .++..|  +|||.+.+.. ++.++|||||||++||+++ |.+||.+.+..+....+.+....+.|..
T Consensus       254 ~~~~~~~~y--~aPE~~~~~~-~~~~~DvwSlG~il~ellt~~~~p~~~~~~~~~~~~~~~~~~~~~p~~  320 (373)
T 3c1x_A          254 TGAKLPVKW--MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY  320 (373)
T ss_dssp             ----CCGGG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCSSCHHHHHHTTCCCCCCTT
T ss_pred             CCCCCcccc--cChHHhcCCC-CCcHHHHHHHHHHHHHHHhCcCCCCCCCCHHHHHHHHHcCCCCCCCCC
Confidence               234568  9999998765 9999999999999999999 7889987766555555554444444433

>3kex_A Receptor tyrosine-protein kinase ERBB-3; kinase domain, inactive kinase, HER3, ATP-binding, cell membrane, membrane, nucleotide-binding; HET: ANP; 2.80A {Homo sapiens} PDB: 3lmg_A*

Probab=99.95  E-value=1.2e-27  Score=188.52  Aligned_cols=145  Identities=17%  Similarity=0.117  Sum_probs=117.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|+.++++++||||+++++++         .+...++++||+.++++..+.         ..+..++ .|++.
T Consensus        57 ~~~~~~~~e~~~l~~l~h~~iv~~~~~~---------~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~qi~~  126 (325)
T 3kex_A           57 QSFQAVTDHMLAIGSLDHAHIVRLLGLC---------PGSSLQLVTQYLPLGSLLDHVRQHRGALGPQLLLNWG-VQIAK  126 (325)
T ss_dssp             SCBCSCCHHHHHHHTCCCTTBCCEEEEE---------CBSSEEEEEECCTTCBSHHHHHSSGGGSCTTHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCCcCeEEEEE---------cCCccEEEEEeCCCCCHHHHHHHccccCCHHHHHHHH-HHHHH
Confidence            3446678999999999999999999985         245689999999999988753         3456666 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCCchhHHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      ||.|||+.+       |+||       +||+|||++..             .++..|  +|||++.+.. ++.++||||+
T Consensus       127 ~l~~lH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  203 (325)
T 3kex_A          127 GMYYLEEHGMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKW--MALESIHFGK-YTHQSDVWSY  203 (325)
T ss_dssp             HHHHHHHTTCCCSCCSSTTEEESSSSCEEECSCSGGGGSCCCTTCCC-----CCTTT--SCHHHHHHCC-CCHHHHHHHH
T ss_pred             HHHHHHhCCCCCCccchheEEECCCCeEEECCCCcccccCcccccccccCCCCcccc--cChHHhccCC-CChhhHhHHh
Confidence            999999998       7777       59999998642             345579  9999998765 9999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      ||++|++++ |..||.+.+.......+......+.
T Consensus       204 G~~l~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  238 (325)
T 3kex_A          204 GVTVWELMTFGAEPYAGLRLAEVPDLLEKGERLAQ  238 (325)
T ss_dssp             HHHHHHHHTTSCCTTTTSCTTHHHHHHHTTCBCCC
T ss_pred             HHHHHHHHhCCCCCccccCHHHHHHHHHcCCCCCC
Confidence            999999999 9999998877666666655443333

>2i6l_A Mitogen-activated protein kinase 6; MAPK6, ERK3, extracellular signal regulated kinase 3, serine phosphorylation, threonine phosphorylation; 2.25A {Homo sapiens}

Probab=99.95  E-value=2.4e-27  Score=185.45  Aligned_cols=172  Identities=29%  Similarity=0.399  Sum_probs=129.1

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccC------CCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQ------PTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~------~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .    ++..++|.+........+.+.+|++++++++||||+++++++.....      ....+....++++||
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~  103 (320)
T 2i6l_A           24 NGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEY  103 (320)
T ss_dssp             --CEEEEEETTTTEEEEEEEEECCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEECTTSCBCCC----CCSCSEEEEEEEC
T ss_pred             CeEEEEEEECCCCeEEEEEEEecCChHHHHHHHHHHHHHHhcCCCCeeEEEEeccccccccccccccccccCceeEEeec
Confidence            677887 2    23334444444455566788999999999999999999998632210      011344677999999


Q ss_pred             cccccHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCcccc-----------
Q psy7174          74 FTKTTKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGRH-----------  120 (188)
Q Consensus        74 ~~~~~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~~-----------  120 (188)
                      +. +++..+       ...+..++ .|++.||.|||+++       |+||        +||+|||++..           
T Consensus       104 ~~-~~L~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  181 (320)
T 2i6l_A          104 ME-TDLANVLEQGPLLEEHARLFM-YQLLRGLKYIHSANVLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHL  181 (320)
T ss_dssp             CS-EEHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCSGGGEEEETTTTEEEECCCTTCBCC--------CC
T ss_pred             cC-CCHHHHhhcCCccHHHHHHHH-HHHHHHHHHHHhCCEecCCCCHHHEEEcCCCCeEEEccCccccccCCCccccccc
Confidence            98 577664       34566677 89999999999998       5555        59999997642           


Q ss_pred             ---cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy7174         121 ---VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       121 ---~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                         .++..|  +|||.+.....++.++|+|||||++|+|++|+.||.+.+..+.+..+.....
T Consensus       182 ~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~  242 (320)
T 2i6l_A          182 SEGLVTKWY--RSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKTLFAGAHELEQMQLILESIP  242 (320)
T ss_dssp             CGGGSCCTT--CCHHHHHCTTCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHSC
T ss_pred             ccccccccc--cCcHHhcCcccCCchhhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHhcC
Confidence               347789  9999987644589999999999999999999999999998888887776543

>3eqc_A Dual specificity mitogen-activated protein kinase; MEK1 kinase, ATP-binding, disease mutation, nucleoti binding, phosphoprotein; HET: 3BM AGS; 1.80A {Homo sapiens} PDB: 3eqd_A* 3eqf_A* 3eqg_A* 3eqh_A* 3eqi_A* 2y4i_C* 3eqb_A* 2p55_A* 1s9j_A* 3dy7_A* 3e8n_A* 3v01_A* 3v04_A* 3dv3_A* 3mbl_A* 3pp1_A* 3orn_A* 3os3_A* 3sls_A* 1s9i_A* ...

Probab=99.95  E-value=2.4e-27  Score=189.09  Aligned_cols=153  Identities=17%  Similarity=0.201  Sum_probs=121.5

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .....+.+.+|++++++++||||+++++++        .++...+++|||+.+++
T Consensus        46 ~g~V~~~~~~~~~~~va~K~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~  117 (360)
T 3eqc_A           46 GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF--------YSDGEISICMEHMDGGS  117 (360)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEECCCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEE--------EETTEEEEEECCCTTCB
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccCHHHHHHHHHHHHHHHHCCCCCEEEEeEEE--------EECCEEEEEEECCCCCC
Confidence            678887 2    223334444332 344567789999999999999999999986        34567899999999999


Q ss_pred             HHHHH--------HHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc---------ccccccc
Q psy7174          79 KARFY--------SHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR---------HVCTLYC  126 (188)
Q Consensus        79 l~~~~--------~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~---------~~~~~~y  126 (188)
                      |..+.        ..+..++ .|++.||.|||+. +       |+||       +||+|||++.         ..||..|
T Consensus       118 L~~~l~~~~~~~~~~~~~i~-~~i~~~l~~lh~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~gt~~y  196 (360)
T 3eqc_A          118 LDQVLKKAGRIPEQILGKVS-IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY  196 (360)
T ss_dssp             HHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHC----CCCCTT
T ss_pred             HHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHhCCEEcCCccHHHEEECCCCCEEEEECCCCcccccccccCCCCCCCe
Confidence            98863        3455666 7999999999985 6       6666       5999999753         4688999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                        +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..
T Consensus       197 --~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~  236 (360)
T 3eqc_A          197 --MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPDAK  236 (360)
T ss_dssp             --CCHHHHTTCC-CSHHHHHHHHHHHHHHHHHTSCCSSCCCHH
T ss_pred             --ECHHHHcCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHH
Confidence              9999998765 999999999999999999999999876543

>3e7e_A HBUB1, BUB1A, mitotic checkpoint serine/threonine-protein kinas; spindle assembly checkpoint, mitosis, kinase, activation, KE CDC20, ATP-binding; HET: ATP; 2.31A {Homo sapiens}

Probab=99.95  E-value=1.8e-27  Score=190.33  Aligned_cols=148  Identities=11%  Similarity=0.084  Sum_probs=118.6

Q ss_pred             ccccccc------CCccc-cccccccchhhhhHHHHHHHHHHhCC---CCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQQ------SKWSP-NTPMARCDVNVETQAKAEGKQDRRLD---YANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~~------~~~~~-~~~i~~~~~~~~~~~~~E~~il~~l~---h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+.      ..... .+|+|........++.+|++++++++   |+||+++++++        ..+...+++|||+
T Consensus        78 ~g~Vy~~~~~~~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~l~~~~~~~iv~~~~~~--------~~~~~~~lv~e~~  149 (365)
T 3e7e_A           78 FAQVYEATQGDLNDAKNKQKFVLKVQKPANPWEFYIGTQLMERLKPSMQHMFMKFYSAH--------LFQNGSVLVGELY  149 (365)
T ss_dssp             SEEEEEEEC-------CCCCEEEEEESSCCHHHHHHHHHHHHHSCGGGGGGBCCEEEEE--------ECSSCEEEEECCC
T ss_pred             CEEEEEEEecCCcccccCcEEEEEEeCCCChhHHHHHHHHHHHhhhhhhhhhhhhheee--------ecCCCcEEEEecc
Confidence            6777773      22222 56666655556677889999999888   99999999976        4467789999999


Q ss_pred             ccccHHHHH-------------HHHHHHHHHHHHHHHHHHhhcC-------C------------------CCeEEEecCC
Q psy7174          75 TKTTKARFY-------------SHLRYLENQQILEGLQALKSSM-------P------------------ALLKKFVGIG  116 (188)
Q Consensus        75 ~~~~l~~~~-------------~~~~~~~~~qi~~gl~~lH~~~-------~------------------~~ilkl~dfg  116 (188)
                      .+|+|..+.             ..+..++ .|++.||+|||+.+       |                  ...+||+|||
T Consensus       150 ~~g~L~~~l~~~~~~~~~~l~~~~~~~i~-~qi~~~L~~lH~~~ivHrDiKp~NIll~~~~~~~~~~~~~~~~~kl~DFG  228 (365)
T 3e7e_A          150 SYGTLLNAINLYKNTPEKVMPQGLVISFA-MRMLYMIEQVHDCEIIHGDIKPDNFILGNGFLEQDDEDDLSAGLALIDLG  228 (365)
T ss_dssp             CSCBHHHHHHHHHTSTTCSCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCSGGGEEECGGGTCC------CTTEEECCCT
T ss_pred             CCCcHHHHHHHhhcccccCCCHHHHHHHH-HHHHHHHHHHhhCCeecCCCCHHHEEecccccCccccccccCCEEEeeCc
Confidence            999998864             2356667 89999999999988       3                  3447999999


Q ss_pred             ccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         117 IGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       117 ~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      ++.             ..||..|  +|||++.+.. |+.++|||||||++|||++|+.||.
T Consensus       229 ~a~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~elltg~~pf~  286 (365)
T 3e7e_A          229 QSIDMKLFPKGTIFTAKCETSGF--QCVEMLSNKP-WNYQIDYFGVAATVYCMLFGTYMKV  286 (365)
T ss_dssp             TCEEGGGSCTTEEECCSSCTTSC--CCHHHHTTCC-BSTHHHHHHHHHHHHHHHHSSCCCE
T ss_pred             hhhhhhccCCCceeeeecCCCCC--CChHHhcCCC-CCccccHHHHHHHHHHHHhCCCccc
Confidence            863             3478999  9999998866 9999999999999999999998884

>3dls_A PAS domain-containing serine/threonine-protein KI; PAS kinase, PASK, protein kinase, drug discovery, ATP-bindin kinase, nucleotide-binding; HET: ADP; 2.30A {Homo sapiens}

Probab=99.95  E-value=8.5e-28  Score=190.53  Aligned_cols=151  Identities=19%  Similarity=0.237  Sum_probs=119.5

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc-cHHHH--------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT-TKARF--------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~-~l~~~--------~~~~~~~~~~qi~~g   97 (188)
                      ..+.+.+|++++++++||||++++++|        .++...++++|++..| ++..+        +..+..++ .|++.|
T Consensus        72 ~~~~~~~E~~~l~~l~h~~Iv~~~~~~--------~~~~~~~lv~e~~~~g~~l~~~~~~~~~l~~~~~~~i~-~qi~~~  142 (335)
T 3dls_A           72 KLGKVTLEIAILSRVEHANIIKVLDIF--------ENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLASYIF-RQLVSA  142 (335)
T ss_dssp             TTEEEEHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCTTSCBHHHHHHTCCCCCHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCEeeEEEEE--------eeCCEEEEEEEeCCCCccHHHHHHhcCCCCHHHHHHHH-HHHHHH
Confidence            345678899999999999999999986        4566789999999777 87765        34566677 899999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccccCCCCchhHHHHHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCII  153 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il  153 (188)
                      |.|||+.+       |+||       +||+|||++.          ..||..|  +|||++.+...++.++||||+||++
T Consensus       143 L~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~a~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~DiwslG~il  220 (335)
T 3dls_A          143 VGYLRLKDIIHRDIKDENIVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEY--CAPEVLMGNPYRGPELEMWSLGVTL  220 (335)
T ss_dssp             HHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECCTTCCBCEECSCGGG--CCHHHHTTCCBCSHHHHHHHHHHHH
T ss_pred             HHHHHhCCeEEeccCHHHEEEcCCCcEEEeecccceECCCCCceeccCCCccc--cChhhhcCCCCCCCcccchhHHHHH
Confidence            99999998       6666       6999999864          3478899  9999998766348899999999999


Q ss_pred             HHHHhCCCCCCCCCh------------HHHHHHHHhhcCCCCCCCCC
Q psy7174         154 CELLLKAPFLPGESD------------LDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       154 ~el~~g~~pf~~~~~------------~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |+|++|..||.+...            ...+..++..+..+.|+.+|
T Consensus       221 ~el~~g~~pf~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~Rp  267 (335)
T 3dls_A          221 YTLVFEENPFCELEETVEAAIHPPYLVSKELMSLVSGLLQPVPERRT  267 (335)
T ss_dssp             HHHHHSSCSCSSGGGGTTTCCCCSSCCCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHHhCCCchhhHHHHHhhccCCCcccCHHHHHHHHHHccCChhhCc
Confidence            999999999964221            23455555655566666554

>2w5a_A Serine/threonine-protein kinase NEK2; Ser/Thr protein kinase, nucleus, meiosis, mitosis, cytoplasm, metal-binding, phosphoprotein; HET: ADP; 1.55A {Homo sapiens} PDB: 2wqo_A* 2xk3_A* 2xk4_A* 2xk6_A* 2xk7_A* 2xk8_A* 2xkc_A* 2xkd_A* 2xke_A* 2xkf_A* 2xnm_A* 2xnn_A* 2xno_A* 2xnp_A* 4afe_A* 2jav_A* 2w5b_A* 2w5h_A 4a4x_A*

Probab=99.95  E-value=4.1e-27  Score=181.22  Aligned_cols=170  Identities=19%  Similarity=0.214  Sum_probs=128.7

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++..      ..+...++++||+.++
T Consensus        19 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~~   92 (279)
T 2w5a_A           19 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID------RTNTTLYIVMEYCEGG   92 (279)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------GGGTEEEEEEECCTTE
T ss_pred             CcEEEEEEECCCCcEEEEEEEEcccCCHHHHHHHHHHHHHHHhcCCCCCCeEEEEEec------CCCceEEEEEeCCCCC
Confidence            677887 2    223334444332  34456778999999999999999999997632      2345789999999999


Q ss_pred             cHHHHH------------HHHHHHHHHHHHHHHHHHhhcC------------CCCe-------EEEecCCccc-------
Q psy7174          78 TKARFY------------SHLRYLENQQILEGLQALKSSM------------PALL-------KKFVGIGIGR-------  119 (188)
Q Consensus        78 ~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~------------~~~i-------lkl~dfg~~~-------  119 (188)
                      +|..+.            ..+..++ .|++.||.|||+.+            |+||       +||+|||++.       
T Consensus        93 ~L~~~l~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~~~~~ivH~dl~p~NIl~~~~~~~kl~dfg~~~~~~~~~~  171 (279)
T 2w5a_A           93 DLASVITKGTKERQYLDEEFVLRVM-TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS  171 (279)
T ss_dssp             EHHHHHHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHHC------CCCCCSGGGEEECSSSCEEECCCCHHHHC---CH
T ss_pred             CHHHHHHhhcccCCCCCHHHHHHHH-HHHHHHHHHHhcccCCCCeeEEeccchhhEEEcCCCCEEEecCchheeeccccc
Confidence            998763            2355566 79999999999864            4455       5999999753       


Q ss_pred             ----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         120 ----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       120 ----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                          ..++..|  +|||.+.+.. ++.++|+||+|+++|+|++|+.||.+.+..+....+......+.+
T Consensus       172 ~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~~~~~~~~  237 (279)
T 2w5a_A          172 FAKTFVGTPYY--MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIP  237 (279)
T ss_dssp             HHHHHHSCCTT--CCHHHHHCC--CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCC
T ss_pred             cccccCCCccc--cChHHhccCC-CCchhhHHHHHHHHHHHHHCCCCCcccCHHHHHHHHhhcccccCC
Confidence                3568889  9999998765 899999999999999999999999988777666666554443333

>3lm5_A Serine/threonine-protein kinase 17B; STK17B, serine/threonine kinase 17B, DRAK2, DAP kinase relat apoptosis-inducing protein kinase 2; HET: QUE; 2.29A {Homo sapiens} PDB: 3lm0_A*

Probab=99.95  E-value=3.9e-27  Score=185.85  Aligned_cols=168  Identities=21%  Similarity=0.167  Sum_probs=132.2

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+++.  .......+.+|+.++++++ ||||+++++++        .++...++++||+.+
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~iv~~~~~~--------~~~~~~~lv~e~~~~  113 (327)
T 3lm5_A           42 FAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPRVINLHEVY--------ENTSEIILILEYAAG  113 (327)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEESEETTEECHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHhccCCCCEEEEEEEE--------EeCCeEEEEEEecCC
Confidence            677887     2334445555542  2334577899999999995 69999999986        456678999999999


Q ss_pred             ccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------
Q psy7174          77 TTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------  119 (188)
Q Consensus        77 ~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------  119 (188)
                      ++|..+          +..+..++ .|++.||.|||+.+       |+||          +||+|||++.          
T Consensus       114 ~~L~~~~~~~~~~~~~~~~~~~i~-~ql~~~L~~LH~~givH~Dikp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~  192 (327)
T 3lm5_A          114 GEIFSLCLPELAEMVSENDVIRLI-KQILEGVYYLHQNNIVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELRE  192 (327)
T ss_dssp             EEGGGGGSSCC-CCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEESCBTTBCCEEECCGGGCEEC--------
T ss_pred             CcHHHHHHHhcccCCCHHHHHHHH-HHHHHHHHHHHHCCeecCcCChHHEEEecCCCCCcEEEeeCccccccCCcccccc
Confidence            988764          34566677 89999999999998       4454          5999999864          


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ..||+.|  +|||++.+.. ++.++||||+||++|+|++|+.||.+.+..+....+.+....+++
T Consensus       193 ~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~il~~ll~g~~pf~~~~~~~~~~~i~~~~~~~~~  254 (327)
T 3lm5_A          193 IMGTPEY--LAPEILNYDP-ITTATDMWNIGIIAYMLLTHTSPFVGEDNQETYLNISQVNVDYSE  254 (327)
T ss_dssp             -CCCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCCCT
T ss_pred             ccCCcCc--cCCeeecCCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCchHHHHHHHhcccccCc
Confidence            3578899  9999998765 899999999999999999999999998887777777665444433

>3og7_A AKAP9-BRAF fusion protein; proto-oncogene, V600E, kinase, transferase; HET: 032; 2.45A {Homo sapiens} SCOP: d.144.1.7 PDB: 4fk3_A* 3c4c_A* 3c4d_A* 3idp_A* 4g9r_A* 3ii5_A* 4e26_A* 3ppj_A* 3ppk_A* 3prf_A* 3pri_A* 3psb_A* 3psd_A* 3q4c_A* 3skc_A* 3tv4_A* 3tv6_A* 3d4q_A* 4e4x_A* 4g9c_A* ...

Probab=99.95  E-value=5.9e-27  Score=181.62  Aligned_cols=160  Identities=15%  Similarity=0.150  Sum_probs=120.7

Q ss_pred             cccccc--cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ--QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+  .....++|.++..  .....+.+.+|++++++++||||+++++++         .+...++++||+.++++.
T Consensus        37 ~g~Vy~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~---------~~~~~~lv~e~~~~~~L~  107 (289)
T 3og7_A           37 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS---------TAPQLAIVTQWCEGSSLY  107 (289)
T ss_dssp             SEEEEEEESSSEEEEEEESCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE---------CSSSCEEEEECCCEEEHH
T ss_pred             CeEEEEEEEcCceEEEEEeccCCCHHHHHHHHHHHHHHHhCCCCcEEEEEeec---------cCCccEEEEEecCCCcHH
Confidence            677777  2233345544432  345567789999999999999999999962         345689999999999997


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccc
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTL  124 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~  124 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.             ..||.
T Consensus       108 ~~l~~~~~~~~~~~~~~i~-~qi~~~L~~lH~~~i~H~Dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~gt~  186 (289)
T 3og7_A          108 HHLHASETKFEMKKLIDIA-RQTARGMDYLHAKSIIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSI  186 (289)
T ss_dssp             HHHTTC---CCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEETTTEEEECCCC------------------CCC
T ss_pred             HHHhhccCCCCHHHHHHHH-HHHHHHHHHHHhCCcccccCccceEEECCCCCEEEccceeccccccccccccccccCCCc
Confidence            752         4456667 89999999999998       6666       5999999753             35788


Q ss_pred             cccCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         125 YCTRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       125 ~y~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      .|  +|||++..  ...++.++||||+|+++|++++|+.||.+.+..+.+..+.
T Consensus       187 ~y--~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~  238 (289)
T 3og7_A          187 LW--MAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIEMV  238 (289)
T ss_dssp             TT--CCHHHHC----CCSCHHHHHHHHHHHHHHHHHSSCTTSSCCCHHHHHHHH
T ss_pred             cc--cCchhhcccCCCCCCcccchHHHHHHHHHHHHCCCCccccchHHHHHHHh
Confidence            99  99999862  2338889999999999999999999998866655544443

>3nsz_A CK II alpha, casein kinase II subunit alpha; inhibitor, transferase-transferase inhibitor CO; HET: ANP; 1.30A {Homo sapiens} SCOP: d.144.1.7 PDB: 2r7i_A 3pe1_A* 1jwh_A* 3pe2_A* 3r0t_A* 3h30_A* 3q9w_A* 3q9x_A* 3q9y_A* 3q9z_A* 3qa0_A 3bqc_A* 2rkp_A* 3c13_A* 3fwq_A 3rps_A* 3u9c_A* 4fbx_A* 3mb7_A* 3mb6_A* ...

Probab=99.95  E-value=4.8e-27  Score=184.98  Aligned_cols=166  Identities=22%  Similarity=0.353  Sum_probs=127.6

Q ss_pred             cccccc-cCCc-cccccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++. ...+++|.......+.+.+|++++++++ ||||+++++++..      ......++++||+.++++..
T Consensus        49 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~E~~~l~~l~~~~~i~~~~~~~~~------~~~~~~~lv~e~~~~~~l~~  122 (330)
T 3nsz_A           49 YSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKD------PVSRTPALVFEHVNNTDFKQ  122 (330)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECSCCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC------TTTCCEEEEEECCCCCCHHH
T ss_pred             CeEEEEEEECCCCcEEEEEEecccchHHHHHHHHHHHHcCCCCCEEEeeeeecc------CCCCceEEEEeccCchhHHH
Confidence            677887 2222 2244444443455678899999999997 9999999998622      33567899999999999987


Q ss_pred             H-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------ccccccccCCCC
Q psy7174          82 F-----YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYCTRGAP  131 (188)
Q Consensus        82 ~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y~~~aP  131 (188)
                      +     ...+..++ .|++.||.|||+.+       |+||        +||+|||++.          ..++..|  +||
T Consensus       123 ~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~Dikp~Nil~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~y--~aP  199 (330)
T 3nsz_A          123 LYQTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF--KGP  199 (330)
T ss_dssp             HGGGCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCTTCCCCSCCSCGGG--CCH
T ss_pred             HHHhCCHHHHHHHH-HHHHHHHHHHHhCCeeeCCCCHHHEEEcCCCCEEEEEeCCCceEcCCCCccccccccccc--cCh
Confidence            6     45566777 89999999999998       5555        6999999864          3567889  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHhCCCCCC-CCChHHHHHHHHhhc
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLLKAPFLP-GESDLDQLTRIFQTL  179 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~g~~pf~-~~~~~~~~~~i~~~~  179 (188)
                      |++.+...++.++||||+||++|+|++|+.||. +.+..+.+..+.+..
T Consensus       200 E~~~~~~~~~~~~DiwslG~il~~ll~g~~p~~~~~~~~~~l~~~~~~~  248 (330)
T 3nsz_A          200 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVL  248 (330)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHH
T ss_pred             hhhcCCCcCCchhhHHHHHHHHHHHHhCCCCcccCCchHHHHHHHHHhc
Confidence            999774558999999999999999999998884 455556666555443

>3soc_A Activin receptor type-2A; structural genomics consortium, SGC, transferase, protein KI; HET: GVD; 1.95A {Homo sapiens} PDB: 3q4t_A* 4asx_A* 2qlu_A*

Probab=99.95  E-value=7.7e-28  Score=189.54  Aligned_cols=154  Identities=19%  Similarity=0.212  Sum_probs=115.9

Q ss_pred             cccccc---cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+   .++..++|.+.. .........+|+.++++++||||+++++++...    .......+++|||+.+|+|..
T Consensus        37 ~g~Vy~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~----~~~~~~~~lv~e~~~~g~L~~  111 (322)
T 3soc_A           37 FGCVWKAQLLNEYVAVKIFPI-QDKQSWQNEYEVYSLPGMKHENILQFIGAEKRG----TSVDVDLWLITAFHEKGSLSD  111 (322)
T ss_dssp             TCEEEEEEETTEEEEEEEECG-GGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE----CSSSEEEEEEEECCTTCBHHH
T ss_pred             ceEEEEEEECCCEEEEEEeec-CchHHHHHHHHHHHHhcCCCCCchhhcceeccC----CCCCceEEEEEecCCCCCHHH
Confidence            788888   233333443332 223334556789999999999999999986331    112345799999999999988


Q ss_pred             HH-------HHHHHHHHHHHHHHHHHHhhc----------C-------CCCe-------EEEecCCccc-----------
Q psy7174          82 FY-------SHLRYLENQQILEGLQALKSS----------M-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        82 ~~-------~~~~~~~~~qi~~gl~~lH~~----------~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      +.       ..+..++ .|++.||.|||+.          +       |+|+       +||+|||++.           
T Consensus       112 ~l~~~~~~~~~~~~i~-~qi~~al~~LH~~~~~l~~~~~~~ivH~Dlkp~Nill~~~~~~kL~DFg~a~~~~~~~~~~~~  190 (322)
T 3soc_A          112 FLKANVVSWNELCHIA-ETMARGLAYLHEDIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDT  190 (322)
T ss_dssp             HHHHCCBCHHHHHHHH-HHHHHHHHHHTCCEEEETTEEECEEECSCCSGGGEEECTTCCEEECCCTTCEEECTTSCCCCC
T ss_pred             HHHhcCCCHHHHHHHH-HHHHHHHHHHHhhccccccccCCCEEeCCCChHhEEECCCCeEEEccCCcccccccccCcccc
Confidence            63       4456666 8999999999998          5       6666       5999999863           


Q ss_pred             --ccccccccCCCCcccccc----CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGA----RMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~----~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                        ..||..|  +|||++.+.    ..++.++||||+||++|||++|+.||.+.
T Consensus       191 ~~~~gt~~y--~aPE~~~~~~~~~~~~~~~~DiwslG~il~el~tg~~pf~~~  241 (322)
T 3soc_A          191 HGQVGTRRY--MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELASRCTAADGP  241 (322)
T ss_dssp             TTCCCCGGG--CCHHHHTTCCCCCHHHHHHHHHHHHHHHHHHHHTTBTTSSSC
T ss_pred             ccCccCccc--cCHhhcccccccCcCCCccchhHHHHHHHHHHHhCCCCCCCC
Confidence              3578899  999998763    22567899999999999999999999653

>3dtc_A Mitogen-activated protein kinase kinase kinase 9; mixed-lineage kinase, MLK family, MLK1 and MLK3 subtype selective inhibitors; HET: VIN; 2.60A {Homo sapiens} SCOP: d.144.1.0

Probab=99.95  E-value=5.8e-27  Score=179.65  Aligned_cols=159  Identities=19%  Similarity=0.197  Sum_probs=119.2

Q ss_pred             cccccc---cCCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ---QSKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+   .++..++|.++..    .....+.+.+|+++++.++||||+++++++        .++...++++||+.++
T Consensus        20 ~g~V~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~   91 (271)
T 3dtc_A           20 FGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGVC--------LKEPNLCLVMEFARGG   91 (271)
T ss_dssp             TEEEEEEEETTEEEEEEEC----------CHHHHHHHHHHHHHCCCTTBCCEEEEE--------CCC--CEEEEECCTTE
T ss_pred             CeEEEEEEEcCCeEEEEEEecCCcccHHHHHHHHHHHHHHHHhcCCCCEeeEEEEE--------ecCCceEEEEEcCCCC
Confidence            677777   2333345544432    123346788999999999999999999986        4456789999999999


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC----------CCCe---------------EEEecCCccc------
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM----------PALL---------------KKFVGIGIGR------  119 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~----------~~~i---------------lkl~dfg~~~------  119 (188)
                      ++..+       ...+..++ .|++.||.|||+++          |+|+               +|++|||++.      
T Consensus        92 ~L~~~~~~~~~~~~~~~~i~-~~l~~~l~~lH~~~~~~i~H~dikp~Nil~~~~~~~~~~~~~~~kl~Dfg~~~~~~~~~  170 (271)
T 3dtc_A           92 PLNRVLSGKRIPPDILVNWA-VQIARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTT  170 (271)
T ss_dssp             EHHHHHTSSCCCHHHHHHHH-HHHHHHHHHHHHSSSSCCCCSCCSGGGEEESSCCSSSCCSSCCEEECCCCC--------
T ss_pred             CHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHhCCCCceeecCCchHHEEEecccccccccCcceEEccCCccccccccc
Confidence            99886       34566677 89999999999965          3333               6999999864      


Q ss_pred             ---ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHH
Q psy7174         120 ---HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI  175 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i  175 (188)
                         ..|+..|  +|||.+.+.. ++.++|+||+|+++|++++|+.||.+.+.......+
T Consensus       171 ~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~  226 (271)
T 3dtc_A          171 KMSAAGAYAW--MAPEVIRASM-FSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGV  226 (271)
T ss_dssp             -----CCGGG--SCHHHHHHCC-CSHHHHHHHHHHHHHHHHHCCCTTTTSCHHHHHHHH
T ss_pred             ccCCCCccce--eCHHHhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHhh
Confidence               4578899  9999998765 899999999999999999999999887765554444

>1qpc_A LCK kinase; alpha beta fold, transferase; HET: PTR ANP; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1qpe_A* 1qpj_A* 2pl0_A* 3kxz_A* 3ac1_A* 2zm4_A* 2zyb_A* 2zm1_A* 3ac2_A* 3ac3_A* 3ac4_A* 3ac5_A* 3ac8_A* 3acj_A* 3ack_A* 3ad4_A* 3ad5_A* 3ad6_A* 3kmm_A* 1qpd_A* ...

Probab=99.95  E-value=5.4e-27  Score=180.64  Aligned_cols=167  Identities=15%  Similarity=0.233  Sum_probs=126.8

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.++.. ....+.+.+|++++++++||||+++++++         .+...++++||+.+++|.
T Consensus        26 ~g~Vy~~~~~~~~~vavK~~~~~-~~~~~~~~~E~~~l~~l~h~~i~~~~~~~---------~~~~~~~v~e~~~~~~L~   95 (279)
T 1qpc_A           26 FGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV---------TQEPIYIITEYMENGSLV   95 (279)
T ss_dssp             TEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE---------CSSSCEEEEECCTTCBHH
T ss_pred             CeEEEEEEEcCCcEEEEEEecCC-cccHHHHHHHHHHHHhCCCcCcceEEEEE---------cCCCcEEEEecCCCCCHH
Confidence            577777 2   122234433332 23456789999999999999999999984         234689999999999998


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------cccc
Q psy7174          81 RF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCTL  124 (188)
Q Consensus        81 ~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~~  124 (188)
                      .+          ...+..++ .|++.||.|||+.+       |+|+       +||+|||++..            .++.
T Consensus        96 ~~l~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  174 (279)
T 1qpc_A           96 DFLKTPSGIKLTINKLLDMA-AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI  174 (279)
T ss_dssp             HHTTSHHHHTCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCT
T ss_pred             HHHhcCCCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCCHhhEEEcCCCCEEECCCcccccccCcccccccCCCCcc
Confidence            75          23455666 79999999999998       5666       59999998642            2345


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      .|  +|||.+.+.. ++.++||||+|+++|+|++ |+.||.+.+..+....+.+....+.+.
T Consensus       175 ~y--~aPE~~~~~~-~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~~  233 (279)
T 1qpc_A          175 KW--TAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPD  233 (279)
T ss_dssp             TT--SCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred             Cc--cChhhhccCC-CCchhhhHHHHHHHHHHHhCCCCCCcccCHHHHHHHHhcccCCCCcc
Confidence            68  9999997655 8999999999999999999 999999888777766665554444433

>3bhy_A Death-associated protein kinase 3; death associated kinase, DAPK3, ZIP kinase, ZIPK, DAP kinase like kinase, DLK, structural genomics consortium; HET: 7CP; 1.24A {Homo sapiens} PDB: 3bqr_A* 2j90_A* 1yrp_A* 2yak_A* 2y4p_A* 3f5u_A* 1jks_A 1jkk_A* 1ig1_A* 1jkl_A 1jkt_A 3eh9_A* 3eha_A* 3f5g_A* 1p4f_A* 1wvw_A 1wvx_A* 1wvy_A* 2w4j_A* 3dgk_A ...

Probab=99.95  E-value=3.3e-27  Score=182.07  Aligned_cols=160  Identities=22%  Similarity=0.249  Sum_probs=125.9

Q ss_pred             cccccc-----cCCccccccccccc------hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD------VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~------~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+     +++..++|.+++..      ....+.+.+|++++++++||||+++++++        .++...++++|+
T Consensus        18 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~   89 (283)
T 3bhy_A           18 FAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNIITLHDIF--------ENKTDVVLILEL   89 (283)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEEC
T ss_pred             ceEEEEEEEcCCCCeeehHHhhhccccccccchHHHHHHHHHHHHHhCCCCCeeehhhee--------cCCCeEEEEEee
Confidence            678887     23344455554421      11356789999999999999999999986        345678999999


Q ss_pred             cccccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc--------
Q psy7174          74 FTKTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR--------  119 (188)
Q Consensus        74 ~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~--------  119 (188)
                      +.+++|..+.        ..+..++ .|++.||.|||+.+       |+|+           +||+|||++.        
T Consensus        90 ~~~~~L~~~l~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~~~~kl~dfg~~~~~~~~~~~  168 (283)
T 3bhy_A           90 VSGGELFDFLAEKESLTEDEATQFL-KQILDGVHYLHSKRIAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEF  168 (283)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEESCSSSSSCCEEECCCTTCEECC-----
T ss_pred             cCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCccCCCCChHHEEEecCCCCCCceEEEecccceeccCCCcc
Confidence            9999998863        3466667 89999999999988       4444           6999999864        


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                        ..++..|  +|||++.+.. ++.++|+||+|+++|++++|..||.+.+..+.+..+.
T Consensus       169 ~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  224 (283)
T 3bhy_A          169 KNIFGTPEF--VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGETKQETLTNIS  224 (283)
T ss_dssp             ---CCCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             cccCCCcCc--cCcceecCCC-CCcchhhhhHHHHHHHHHHCCCCCCCcchHHHHHHhH
Confidence              3477889  9999997765 8999999999999999999999998877666555543

>3i6u_A CDS1, serine/threonine-protein kinase CHK2; Ser/Thr protein kinase, FHA domain, ATP-binding, cell cycle, mutation, LI-fraumeni syndrome, magnesium; 3.00A {Homo sapiens} PDB: 3i6w_A

Probab=99.95  E-value=2.3e-27  Score=193.32  Aligned_cols=150  Identities=19%  Similarity=0.210  Sum_probs=112.3

Q ss_pred             cccccc-----cCCcccccccccc--------chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--------DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--------~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||+     +++..++|.+.+.        .......+.+|+++|++++||||+++++++         .....+++|
T Consensus       148 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~l~~~~---------~~~~~~lv~  218 (419)
T 3i6u_A          148 CGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCIIKIKNFF---------DAEDYYIVL  218 (419)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEGGGGTTC--------CCHHHHHHHHHHCCCTTBCCCCEEE---------ESSEEEEEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEEechhcccccccchhHHHHHHHHHHHHhCCCCCEeeEEEEE---------ecCceEEEE
Confidence            678887     2233445544431        112234578999999999999999999984         234579999


Q ss_pred             eccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc-------
Q psy7174          72 KIFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR-------  119 (188)
Q Consensus        72 e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~-------  119 (188)
                      ||+.+++|...        +..+..++ .|++.||.|||+++       |+||          +||+|||++.       
T Consensus       219 e~~~~g~L~~~l~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~ivHrDlkp~NIll~~~~~~~~~kl~DFG~a~~~~~~~~  297 (419)
T 3i6u_A          219 ELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQYLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSL  297 (419)
T ss_dssp             ECCTTCBGGGGTSSSCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEESSSSSSCCEEECCSSTTTSCC----
T ss_pred             EcCCCCcHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCChHhEEEecCCCcceEEEeecccceecCCCcc
Confidence            99999998764        45566677 89999999999988       5555          6999999864       


Q ss_pred             ---ccccccccCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 ---HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                         ..||+.|  +|||++.+  ...|+.++||||+||++|+|++|++||.+.
T Consensus       298 ~~~~~gt~~y--~aPE~~~~~~~~~~~~~~DiwslG~il~~lltg~~pf~~~  347 (419)
T 3i6u_A          298 MRTLCGTPTY--LAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEH  347 (419)
T ss_dssp             -------CTT--CCTTTTC----CTTHHHHHHHHHHHHHHHHHHSSCSSCCC
T ss_pred             ccccCCCCCc--cCceeeecCCCCCCCchhhhHhHHHHHHHHHHCCCCCCCC
Confidence               4578899  99999853  234889999999999999999999999764

>1blx_A Cyclin-dependent kinase 6; inhibitor protein, cyclin-dependent kinase, cell cycle control, alpha/beta, complex (inhibitor protein/kinase); 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 1bi7_A 1bi8_A 1g3n_A 2f2c_B* 1jow_B* 2euf_B* 1xo2_B* 3nup_A* 3nux_A* 2w9z_B 2w99_B 2w96_B 2w9f_B

Probab=99.95  E-value=3e-27  Score=185.77  Aligned_cols=176  Identities=26%  Similarity=0.497  Sum_probs=133.7

Q ss_pred             cccccc-cC-----Ccccccccccc--chhhhhHHHHHHHHHHhC---CCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QS-----KWSPNTPMARC--DVNVETQAKAEGKQDRRL---DYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~-----~~~~~~~i~~~--~~~~~~~~~~E~~il~~l---~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ ..     +..++|.+...  .......+.+|+++++.+   +||||+++++++...   ........++++|+
T Consensus        24 ~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~l~~l~~~~h~~i~~~~~~~~~~---~~~~~~~~~lv~e~  100 (326)
T 1blx_A           24 YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS---RTDRETKLTLVFEH  100 (326)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE---ECSSEEEEEEEEEC
T ss_pred             cEEEEEEEecCCCCEEEEEEEeccCcccccCCchhhHHHHHHHhhhccCCCCeEeeeeeeeec---ccCCCceEEEEEec
Confidence            678887 22     22334433332  222345677888888776   899999999986321   11245678999999


Q ss_pred             cccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          74 FTKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        74 ~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      +. +++..+          ...+..++ .|++.||.|||+.+       |+|+       +||+|||++.          
T Consensus       101 ~~-~~L~~~l~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~gi~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~  178 (326)
T 1blx_A          101 VD-QDLTTYLDKVPEPGVPTETIKDMM-FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTS  178 (326)
T ss_dssp             CS-CBHHHHHHHSCTTCSCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCC
T ss_pred             CC-CCHHHHHHhcccCCCCHHHHHHHH-HHHHHHHHHHHHCCceeccCCHHHeEEcCCCCEEEecCcccccccCCCCccc
Confidence            98 466654          23456667 89999999999998       5666       5999999854          


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..++..|  +|||++.+.. ++.++||||+||++|+|++|++||.+.+....+..+....+.|.+..||
T Consensus       179 ~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  244 (326)
T 1blx_A          179 VVVTLWY--RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  244 (326)
T ss_dssp             CCCCCTT--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred             cccccce--eCHHHHhcCC-CCcchhHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHHHcCCCCcccCc
Confidence            3467889  9999998765 8999999999999999999999999999999999999888887776664

>1p4o_A Insulin-like growth factor I receptor protein; IGF-1R, kinase domain, hormone-growth factor complex; 1.50A {Homo sapiens} SCOP: d.144.1.7 PDB: 1m7n_A 3lvp_A* 3lw0_A* 1jqh_A* 2zm3_A* 3f5p_A* 3i81_A* 2oj9_A* 3nw5_A* 3nw6_A* 3nw7_A* 3o23_A* 3qqu_A* 3d94_A* 1k3a_A* 2z8c_A* 1ir3_A* 1gag_A* 1irk_A 3bu3_A* ...

Probab=99.95  E-value=7.7e-27  Score=183.21  Aligned_cols=148  Identities=13%  Similarity=0.222  Sum_probs=118.7

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH------------------HH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS------------------HL   86 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~------------------~~   86 (188)
                      ......+.+|++++++++||||+++++++        .++...+++|||+.+++|..+..                  .+
T Consensus        69 ~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  140 (322)
T 1p4o_A           69 MRERIEFLNEASVMKEFNCHHVVRLLGVV--------SQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM  140 (322)
T ss_dssp             HHHHHHHHHHHHHGGGCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHHHHHHHHHHHHHHCTTCCCCCHHHH
T ss_pred             HHHHHHHHHHHHHHHhcCCCCEeeeEEEE--------ccCCccEEEEEeCCCCcHHHHHHHhchhhccCCCCCCcCHHHH
Confidence            34556788999999999999999999986        44567899999999999988632                  23


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCC
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~  139 (188)
                      ..++ .|++.||.|||+++       |+||       +||+|||++..             .++..|  +|||++.+.. 
T Consensus       141 ~~i~-~qi~~~l~~lH~~~i~H~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-  216 (322)
T 1p4o_A          141 IQMA-GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRW--MSPESLKDGV-  216 (322)
T ss_dssp             HHHH-HHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGGGGGGCEEGGGSSEECGGG--CCHHHHHHCC-
T ss_pred             HHHH-HHHHHHHHHHHHCCCccCCCccceEEEcCCCeEEECcCccccccccccccccccCCCCCCCc--cChhhhccCC-
Confidence            4455 79999999999998       6666       59999998642             345679  9999998765 


Q ss_pred             CCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         140 YGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      ++.++||||+||++|+|++ |..||.+.+..+....+......+.+
T Consensus       217 ~~~~~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~~  262 (322)
T 1p4o_A          217 FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKP  262 (322)
T ss_dssp             CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCC
T ss_pred             CCchhhHHHHHHHHHHHHhcCCCccccCCHHHHHHHHHcCCcCCCC
Confidence            8999999999999999999 89999888777666666554333333

>3a7i_A MST3 kinase, serine/threonine kinase 24 (STE20 homolog, yeast); two-LOBE protein kinase fold, ATP-binding, nucleotid binding, transferase; HET: TPO ADE; 1.45A {Homo sapiens} PDB: 3a7g_A* 3a7h_A* 3a7f_A* 3a7j_A* 3ckw_A 3ckx_A* 3ggf_A* 2xik_A*

Probab=99.95  E-value=8.1e-27  Score=181.77  Aligned_cols=161  Identities=19%  Similarity=0.213  Sum_probs=126.5

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .....+.+.+|++++++++||||+++++++        .++...++++||+.+++
T Consensus        35 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~  106 (303)
T 3a7i_A           35 FGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYVTKYYGSY--------LKDTKLWIIMEYLGGGS  106 (303)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEETTTCSTTHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTTEE
T ss_pred             CeEEEEEEECCCCcEEEEEEecccccHHHHHHHHHHHHHHHhCCCCCEeEEEEEE--------ecCCeEEEEEEeCCCCc
Confidence            678887 2    223334444332 234557889999999999999999999986        34567899999999999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccccc
Q psy7174          79 KARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYC  126 (188)
Q Consensus        79 l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y  126 (188)
                      +..+       ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..|+..|
T Consensus       107 L~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~y  185 (303)
T 3a7i_A          107 ALDLLEPGPLDETQIATIL-REILKGLDYLHSEKKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFW  185 (303)
T ss_dssp             HHHHHTTSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECBTTBCCBCCCCSCGGG
T ss_pred             HHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCccCCCChheEEECCCCCEEEeecccceecCccccccCccCCCcCc
Confidence            9886       34566677 89999999999998       5565       6999999753           3467889


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                        +|||++.+.. ++.++|+||||+++|++++|++||.+.+.......+..
T Consensus       186 --~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  233 (303)
T 3a7i_A          186 --MAPEVIKQSA-YDSKADIWSLGITAIELARGEPPHSELHPMKVLFLIPK  233 (303)
T ss_dssp             --CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHH
T ss_pred             --cCHHHHhcCC-CCchhhhHHHHHHHHHHccCCCCCCCcCHHHHHHHhhc
Confidence              9999998765 89999999999999999999999988776655544433

>2eva_A TAK1 kinase - TAB1 chimera fusion protein; transferase/transferase activator complex; HET: ADN; 2.00A {Homo sapiens}

Probab=99.95  E-value=1.2e-26  Score=181.67  Aligned_cols=148  Identities=16%  Similarity=0.154  Sum_probs=113.5

Q ss_pred             cccccccCCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY   83 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~   83 (188)
                      ||.||+.......+++|.. .....+.+.+|++++++++||||+++++++.          ...+++|||+.+++|..+.
T Consensus        21 ~g~V~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~----------~~~~lv~e~~~~~~L~~~l   90 (307)
T 2eva_A           21 FGVVCKAKWRAKDVAIKQIESESERKAFIVELRQLSRVNHPNIVKLYGACL----------NPVCLVMEYAEGGSLYNVL   90 (307)
T ss_dssp             SSEEEEEEETTEEEEEEECSSTTHHHHHHHHHHHHHHCCCTTBCCEEEBCT----------TTTEEEEECCTTCBHHHHH
T ss_pred             CceEEEEEECCeeEEEEEecChhHHHHHHHHHHHHhcCCCCCcCeEEEEEc----------CCcEEEEEcCCCCCHHHHH
Confidence            6778871111112334443 2345677899999999999999999999751          3479999999999998863


Q ss_pred             -----------HHHHHHHHHHHHHHHHHHhh---cC-------CCCe--------EEEecCCccc--------ccccccc
Q psy7174          84 -----------SHLRYLENQQILEGLQALKS---SM-------PALL--------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        84 -----------~~~~~~~~~qi~~gl~~lH~---~~-------~~~i--------lkl~dfg~~~--------~~~~~~y  126 (188)
                                 ..+..++ .|++.||.|||+   ++       |+||        +||+|||++.        ..||..|
T Consensus        91 ~~~~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~~~~ivH~dlkp~NIll~~~~~~~kl~Dfg~~~~~~~~~~~~~gt~~y  169 (307)
T 2eva_A           91 HGAEPLPYYTAAHAMSWC-LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAW  169 (307)
T ss_dssp             HCSSSEECCCHHHHHHHH-HHHHHHHHHHHTCSSSCCCCCCCSGGGEEEETTTTEEEECCCCC------------CCTTS
T ss_pred             hccCCCCccCHHHHHHHH-HHHHHHHHHHHhCCCCCeecCCCChhHEEEeCCCCEEEEcccccccccccccccCCCCCce
Confidence                       3445556 799999999999   55       5555        5999999853        4578899


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                        +|||++.+.. ++.++||||||+++|+|++|+.||...
T Consensus       170 --~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~p~~~~  206 (307)
T 2eva_A          170 --MAPEVFEGSN-YSEKCDVFSWGIILWEVITRRKPFDEI  206 (307)
T ss_dssp             --SCHHHHTCCC-CCTHHHHHHHHHHHHHHHHTCCTTTTT
T ss_pred             --EChhhhCCCC-CCcHHHHHHHHHHHHHHHHCCCCchhh
Confidence              9999998765 899999999999999999999999754

>1nxk_A MAP kinase-activated protein kinase 2; MK2, phosphorylation, staurosporine, transfe; HET: STU; 2.70A {Homo sapiens} SCOP: d.144.1.7 PDB: 1kwp_A* 1ny3_A* 2onl_C

Probab=99.95  E-value=3.3e-27  Score=191.36  Aligned_cols=153  Identities=21%  Similarity=0.206  Sum_probs=113.4

Q ss_pred             cccccc-cCCcc-ccccccccchhhhhHHHHHHHHHH-hCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQDR-RLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il~-~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++.. ..+++|..  +....+.+|++++. ..+||||++++++|..    ...++...+++|||+.+|+|..
T Consensus        75 ~g~V~~~~~~~~~~~vAiK~~--~~~~~~~~E~~~~~~~~~hp~iv~l~~~~~~----~~~~~~~~~lv~E~~~gg~L~~  148 (400)
T 1nxk_A           75 NGKVLQIFNKRTQEKFALKML--QDCPKARREVELHWRASQCPHIVRIVDVYEN----LYAGRKCLLIVMECLDGGELFS  148 (400)
T ss_dssp             TEEEEEEEETTTCCEEEEEEE--ECSHHHHHHHHHHHHHTTSTTBCCEEEEEEE----EETTEEEEEEEEECCCSEEHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEe--CcchhHHHHHHHHHHhcCCCCcceEeEEEee----cccCCcEEEEEEEeCCCCcHHH
Confidence            677887 22221 13344432  12356788999875 4579999999998632    1123456899999999999977


Q ss_pred             H----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccc
Q psy7174          82 F----------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        82 ~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~  124 (188)
                      +          +..+..++ .|++.||.|||+.+       |+||          +||+|||++.          ..||.
T Consensus       149 ~l~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlkp~Nill~~~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~  227 (400)
T 1nxk_A          149 RIQDRGDQAFTEREASEIM-KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP  227 (400)
T ss_dssp             HHHCC---CCBHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSSSTTCCEEECCCTTCEECC-----------C
T ss_pred             HHHHhCCCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCcCcceEEEecCCCCccEEEEecccccccCCCCccccCCCCC
Confidence            5          34566677 89999999999988       4444          6999999854          45688


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      .|  +|||++.+.. |+.++|||||||++|+|++|++||.+.+
T Consensus       228 ~y--~aPE~~~~~~-~~~~~DiwslG~il~ell~g~~pf~~~~  267 (400)
T 1nxk_A          228 YY--VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNH  267 (400)
T ss_dssp             TT--CCGGGSCCCC-SSSHHHHHHHHHHHHHHHHSSCSCCCCT
T ss_pred             Cc--cCHhhcCCCC-CCCcccHHHHHHHHHHHHhCCCCCCCCc
Confidence            99  9999997755 9999999999999999999999997654

>3f66_A Hepatocyte growth factor receptor; C-Met, protein kinase, quinoxaline, alternative splicing, ATP-binding, chromosomal rearrangement; HET: IHX; 1.40A {Homo sapiens} PDB: 3i5n_A* 3u6h_A* 3u6i_A* 4deg_A* 4deh_A* 4dei_A* 3ccn_A* 2rfn_A* 2rfs_A* 3cd8_A* 3efj_A* 3efk_A* 3lq8_A* 3zxz_A* 2wkm_A* 2wgj_A* 3zze_A* 4aoi_A* 4ap7_A* 3q6w_A* ...

Probab=99.95  E-value=4.8e-27  Score=182.55  Aligned_cols=152  Identities=20%  Similarity=0.270  Sum_probs=119.5

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQI   94 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi   94 (188)
                      .....+.+.+|++++++++||||+++++++.       ..+...++++||+.+++|..+.         ..+..++ .|+
T Consensus        66 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~i~-~ql  137 (298)
T 3f66_A           66 DIGEVSQFLTEGIIMKDFSHPNVLSLLGICL-------RSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDLIGFG-LQV  137 (298)
T ss_dssp             SHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC-------CSSSCCEEEEECCTTCBHHHHHHCTTCCCCHHHHHHHH-HHH
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCEeeeeeEEE-------cCCCceEEEEeCCCCCCHHHHHHhcccCCCHHHHHHHH-HHH
Confidence            3445677899999999999999999999752       3356789999999999998863         4455666 799


Q ss_pred             HHHHHHHhhcC-------CCCe-------EEEecCCccc---------------ccccccccCCCCccccccCCCCchhH
Q psy7174          95 LEGLQALKSSM-------PALL-------KKFVGIGIGR---------------HVCTLYCTRGAPELLFGARMYGVGID  145 (188)
Q Consensus        95 ~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------~~~~~~y~~~aPe~~~~~~~~~~~~D  145 (188)
                      +.||.|||+++       |+|+       +||+|||++.               ..+|..|  +|||.+.+.. ++.++|
T Consensus       138 ~~~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~D  214 (298)
T 3f66_A          138 AKGMKYLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKW--MALESLQTQK-FTTKSD  214 (298)
T ss_dssp             HHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSCGGGCCCSCGGGCBC-----CCBCGGG--SCHHHHHHCC-CCHHHH
T ss_pred             HHHHHHHHhCCccCCCCchheEEECCCCCEEECcccccccccccchhccccccCCCCCccc--cChHHhcCCC-CChHHH
Confidence            99999999998       6666       5999999864               2245568  9999997765 899999


Q ss_pred             HHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         146 MWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       146 iwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                      +||+|+++|++++ +.+||.+.+..+....+.+....+.+..
T Consensus       215 i~slG~il~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  256 (298)
T 3f66_A          215 VWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEY  256 (298)
T ss_dssp             HHHHHHHHHHHHTTSCCSSTTSCTTTHHHHHHTTCCCCCCTT
T ss_pred             HHHHHHHHHHHHhCCCCCCccCCHHHHHHHHhcCCCCCCCcc
Confidence            9999999999999 7788877766555555555444444433

>3fdn_A Serine/threonine-protein kinase 6; aurora kinase inhibitors, virtual screening, X-RAY CO- crystal analysis, structure-based drug design (SBDD); HET: MMH; 1.90A {Homo sapiens} SCOP: d.144.1.7 PDB: 3k5u_A* 3m11_A* 2c6e_A* 1muo_A* 2bmc_A* 2j4z_A* 1ol6_A* 3up2_A* 3unz_A* 3uo5_A* 3uo6_A* 3uod_A* 3uoh_A* 3uoj_A* 3uok_A* 3uo4_A* 3uol_A* 3up7_A* 4dea_A* 4deb_A* ...

Probab=99.95  E-value=5.9e-27  Score=180.58  Aligned_cols=161  Identities=18%  Similarity=0.215  Sum_probs=125.9

Q ss_pred             cccccc-cC----Ccccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ ..    +..++|.+.+.   .......+.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~   93 (279)
T 3fdn_A           22 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF--------HDATRVYLILEYAPL   93 (279)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CeEEEEEEEccCCcEEEEEEEeccccchhhHHHHHHHHHHHHHcCCCCCCcchhheE--------ecCCEEEEEEecCCC
Confidence            677887 22    22334443332   223346688999999999999999999986        445678999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------cccccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVCTLY  125 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~~~  125 (188)
                      +++....        ..+..++ .|++.||.|||+.+       |+||       +||+|||++.         ..|+..
T Consensus        94 ~~l~~~l~~~~~~~~~~~~~~~-~qi~~~l~~LH~~~i~H~dlkp~Nili~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~  172 (279)
T 3fdn_A           94 GTVYRELQKLSKFDEQRTATYI-TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTDLCGTLD  172 (279)
T ss_dssp             EEHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHTTTCEECCCCGGGEEECTTSCEEECSCCEESCC--------CCCCT
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCEecccCChHhEEEcCCCCEEEEeccccccCCcccccccCCCCC
Confidence            9987752        3456666 79999999999988       6666       5999999743         457889


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      |  +|||.+.+.. ++.++||||+|+++|+|++|..||.+.+..+....+..
T Consensus       173 y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~~  221 (279)
T 3fdn_A          173 Y--LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISR  221 (279)
T ss_dssp             T--CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHH
T ss_pred             c--cCHhHhccCC-CCccchhHhHHHHHHHHHHCCCCCCCCcHHHHHHHHHh
Confidence            9  9999998755 89999999999999999999999998877766666544

>3kvw_A DYRK2, dual specificity tyrosine-phosphorylation-regulat 2; KI-(Y)-phosphorylation REG kinase 2, PSK-H2, kinase, structural genomics consortium; HET: SEP PTR IRB; 2.28A {Homo sapiens} PDB: 3k2l_A* 4azf_A*

Probab=99.95  E-value=2.8e-27  Score=193.38  Aligned_cols=167  Identities=28%  Similarity=0.454  Sum_probs=130.9

Q ss_pred             cccccc-cCCc-ccccccccc--chhhhhHHHHHHHHHHhC------CCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARC--DVNVETQAKAEGKQDRRL------DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~--~~~~~~~~~~E~~il~~l------~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .++. ...+|+|..  .....+.+.+|+++++.+      +|+||+++++++        ......++++|++
T Consensus       110 fg~V~~a~~~~~~~~vAvK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~iv~~~~~~--------~~~~~~~lv~e~~  181 (429)
T 3kvw_A          110 FGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVIHMLENF--------TFRNHICMTFELL  181 (429)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHTTCTTSCSCBCCEEEEE--------EETTEEEEEECCC
T ss_pred             cEEEEEEEECCCCcEEEEEEECCccchHHHHHHHHHHHHHHhhccccCCcCEEEEEeec--------ccCCeEEEEEecc
Confidence            678887 2221 123444442  233446778899988877      477999999986        3356789999999


Q ss_pred             ccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc--------c
Q psy7174          75 TKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR--------H  120 (188)
Q Consensus        75 ~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~--------~  120 (188)
                      .+ ++..+          +..+..++ .|++.||.|||+.+       |+||         +||+|||++.        .
T Consensus       182 ~~-~L~~~l~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDlKp~NILl~~~~~~~vkL~DFG~a~~~~~~~~~~  259 (429)
T 3kvw_A          182 SM-NLYELIKKNKFQGFSLPLVRKFA-HSILQCLDALHKNRIIHCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTY  259 (429)
T ss_dssp             CC-BHHHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHHHHTEECSCCSGGGEEESSTTSCCEEECCCTTCEETTCCCCSS
T ss_pred             CC-CHHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHeEEccCCCcceEEeecccceecCCccccc
Confidence            75 55543          23466677 89999999999998       5555         5999999863        5


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      .||..|  +|||++.+.. ++.++|||||||++|||++|.+||.+.+..+.+..+.+.++.|++
T Consensus       260 ~gt~~y--~aPE~~~~~~-~~~~~DiwSlG~il~elltG~~pf~~~~~~~~l~~i~~~~~~p~~  320 (429)
T 3kvw_A          260 IQSRFY--RAPEVILGAR-YGMPIDMWSLGCILAELLTGYPLLPGEDEGDQLACMIELLGMPSQ  320 (429)
T ss_dssp             CSCGGG--CCHHHHHTBC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             CCCCCc--cChHHHhCCC-CCchHHHHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCCCH
Confidence            678899  9999998866 999999999999999999999999999999999999988887764

>3qd2_B Eukaryotic translation initiation factor 2-alpha; EIF2A kinase, phosphoryalation, gene regulation; HET: TPO; 2.81A {Mus musculus}

Probab=99.95  E-value=6.6e-28  Score=189.49  Aligned_cols=155  Identities=20%  Similarity=0.204  Sum_probs=117.1

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCC-------------------
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQP-------------------   59 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~-------------------   59 (188)
                      ||.||+ .    ++..++|.++.. .....+.+.+|++++++++||||++++++|.+....                   
T Consensus        19 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (332)
T 3qd2_B           19 FGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFNAWLETPPEKWQEEMDEIWLKDESTDWP   98 (332)
T ss_dssp             CSEEEEEEETTTCCEEEEEEEECCSTTTHHHHHHHHHHHHTSCCCTTBCCEEEEEEECCSCHHHHHHHC-----------
T ss_pred             CeEEEEEEEcCCCcEEEEEEeecCCchhHHHHHHHHHHHHHhCCCCCEeeEEEEEEEeccchhhhhhhhhhhcccccccc
Confidence            788887 2    233344444332 334557789999999999999999999987542210                   


Q ss_pred             ------------------------------CCCCCCccEEEEeccccccHHHHHH-----------HHHHHHHHHHHHHH
Q psy7174          60 ------------------------------TTLSTSSDYIVVKIFTKTTKARFYS-----------HLRYLENQQILEGL   98 (188)
Q Consensus        60 ------------------------------~~~~~~~~~iv~e~~~~~~l~~~~~-----------~~~~~~~~qi~~gl   98 (188)
                                                    ....+...+++|||+.+++|..+..           .+..++ .|++.||
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~~i~-~qi~~aL  177 (332)
T 3qd2_B           99 LSSPSPMDAPSVKIRRMDPFSTKNTVGQLQPSSPKVYLYIQMQLCRKENLKDWMNRRCSLEDREHGVCLHIF-IQIAEAV  177 (332)
T ss_dssp             ---------------------------------CCCEEEEEEECCCSSCHHHHHHTCCSGGGSCHHHHHHHH-HHHHHHH
T ss_pred             ccCCCcccccccceeeccccCcccccccccCCCCCceEEEEEEecCCCCHHHHHhcccCccchhhHHHHHHH-HHHHHHH
Confidence                                          0011224799999999999988632           255666 7999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc-----------------------ccccccccCCCCccccccCCCC
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR-----------------------HVCTLYCTRGAPELLFGARMYG  141 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~-----------------------~~~~~~y~~~aPe~~~~~~~~~  141 (188)
                      .|||+++       |+||       +||+|||++.                       ..||..|  +|||++.+.. ++
T Consensus       178 ~~LH~~~ivH~Dlkp~NIll~~~~~~kL~DfG~a~~~~~~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~  254 (332)
T 3qd2_B          178 EFLHSKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYATHTGQVGTKLY--MSPEQIHGNN-YS  254 (332)
T ss_dssp             HHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECSCC--------------CCCSCC-CGGG--SCHHHHHCCC-CC
T ss_pred             HHHHhCCeeecCCCcccEEEeCCCCEEEeecCcccccccchhhccccccccccccccccCCCcCc--cChHHhcCCC-Cc
Confidence            9999998       6666       6999999854                       2478899  9999998765 99


Q ss_pred             chhHHHHHHHHHHHHHhCCCCC
Q psy7174         142 VGIDMWAVGCIICELLLKAPFL  163 (188)
Q Consensus       142 ~~~DiwslG~il~el~~g~~pf  163 (188)
                      .++||||+||++|+|++|..|+
T Consensus       255 ~~~Di~slG~il~el~~~~~~~  276 (332)
T 3qd2_B          255 HKVDIFSLGLILFELLYSFSTQ  276 (332)
T ss_dssp             THHHHHHHHHHHHHHHSCCCCH
T ss_pred             chhhHHHHHHHHHHHHHcCCCh
Confidence            9999999999999999987775

>2yfx_A Tyrosine-protein kinase receptor; nucleotide-binding, transferase; HET: VGH; 1.70A {Homo sapiens} PDB: 2xp2_A* 3aox_A* 2yhv_A 3lcs_A* 3lct_A* 4dce_A* 2xba_A* 2xb7_A*

Probab=99.95  E-value=7.1e-27  Score=184.12  Aligned_cols=150  Identities=16%  Similarity=0.234  Sum_probs=120.6

Q ss_pred             chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------------HHHH
Q psy7174          24 DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------------HLRY   88 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------------~~~~   88 (188)
                      ......++.+|+.++++++||||+++++++        .++...+++|||+.+++|..+..               .+..
T Consensus        73 ~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  144 (327)
T 2yfx_A           73 SEQDELDFLMEALIISKFNHQNIVRCIGVS--------LQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH  144 (327)
T ss_dssp             CHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTEEHHHHHHHTSCCSSSTTSCCHHHHHH
T ss_pred             chhhHHHHHHHHHHHhhCCCCCCCeEEEEE--------cCCCCcEEEEecCCCCcHHHHHHhhcccccccccccHHHHHH
Confidence            345566789999999999999999999986        44567899999999999988642               3455


Q ss_pred             HHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc-------------ccccccccCCCCccccccC
Q psy7174          89 LENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR-------------HVCTLYCTRGAPELLFGAR  138 (188)
Q Consensus        89 ~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~  138 (188)
                      ++ .|++.||.|||+.+       |+||          +||+|||++.             ..++..|  +|||++.+..
T Consensus       145 i~-~qi~~al~~LH~~~i~H~dlkp~NIli~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~  221 (327)
T 2yfx_A          145 VA-RDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRASYYRKGGCAMLPVKW--MPPEAFMEGI  221 (327)
T ss_dssp             HH-HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECCCHHHHHHHC------CCGGGSCGGG--CCHHHHHHCC
T ss_pred             HH-HHHHHHHHHHhhCCeecCcCCHhHEEEecCCCcceEEECccccccccccccccccCCCcCCCcce--eCHhHhcCCC
Confidence            66 79999999999988       4444          6999999753             3456789  9999997765


Q ss_pred             CCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         139 MYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                       ++.++|||||||++|+|++ |..||.+.+..+....+......+.+.
T Consensus       222 -~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  268 (327)
T 2yfx_A          222 -FTSKTDTWSFGVLLWEIFSLGYMPYPSKSNQEVLEFVTSGGRMDPPK  268 (327)
T ss_dssp             -CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCT
T ss_pred             -CCchhhHHHHHHHHHHHHcCCCCCCCCcCHHHHHHHHhcCCCCCCCC
Confidence             8999999999999999998 999999888777766665554443333

>2zmd_A Dual specificity protein kinase TTK; MPS1, T686A, ATP-binding, nucleotide-bindi phosphoprotein, serine/threonine-protein kinase; HET: 537 7PE; 2.88A {Homo sapiens} PDB: 2zmc_A*

Probab=99.95  E-value=6.7e-27  Score=188.96  Aligned_cols=151  Identities=17%  Similarity=0.224  Sum_probs=116.1

Q ss_pred             cccccc-cCCcccccccccc-----chhhhhHHHHHHHHHHhCC--CCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QSKWSPNTPMARC-----DVNVETQAKAEGKQDRRLD--YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~~~~~~~~i~~~-----~~~~~~~~~~E~~il~~l~--h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ ..+....+|+|..     .....+.+.+|++++++++  ||||+++++++        ..+...+++|| +.+
T Consensus        69 fg~Vy~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~Ei~~l~~l~~~~~~iv~~~~~~--------~~~~~~~lv~E-~~~  139 (390)
T 2zmd_A           69 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE--------ITDQYIYMVME-CGN  139 (390)
T ss_dssp             SEEEEEEECTTCCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEEE-CCS
T ss_pred             CeEEEEEEcCCCCEEEEEEEecccccHHHHHHHHHHHHHHHHcccCCCeEEEEEEEE--------ecCCEEEEEEe-cCC
Confidence            788887 2222223444432     3345577899999999997  59999999975        34567899999 677


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc-------------ccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR-------------HVC  122 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~-------------~~~  122 (188)
                      ++|..+.        ..+..++ .|++.||.|||+.+       |+||      +||+|||++.             ..|
T Consensus       140 ~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~ivHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  218 (390)
T 2zmd_A          140 IDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG  218 (390)
T ss_dssp             EEHHHHHHHCSSCCHHHHHHHH-HHHHHHHHHHHTTTCCCCCCCGGGEEESSSCEEECCCSSSCCC---------CCSCC
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCCHHHEEEECCeEEEEecCccccccCCCccccCCCCCc
Confidence            8887752        3456666 89999999999998       6676      5999999854             357


Q ss_pred             cccccCCCCcccccc----------CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGA----------RMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~----------~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      |+.|  +|||++.+.          ..++.++|||||||++|+|++|++||.+..
T Consensus       219 t~~y--~aPE~~~~~~~~~~~~~~~~~~~~~~DiwSlGvil~ell~G~~Pf~~~~  271 (390)
T 2zmd_A          219 AVNY--MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  271 (390)
T ss_dssp             CGGG--CCHHHHHCC------------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCCc--cChHHhhhccccccccccccCCCChhhHHHHHHHHHHHHHCCCcchhhh
Confidence            8999  999998641          238999999999999999999999997653

>3lzb_A Epidermal growth factor receptor; epidermal growth factor kinase domain, multitargeted small M kinase inhibitor; HET: ITI; 2.70A {Homo sapiens}

Probab=99.95  E-value=4e-27  Score=185.99  Aligned_cols=169  Identities=13%  Similarity=0.144  Sum_probs=127.5

Q ss_pred             cccccc-----cCCcccc-cccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-----QSKWSPN-TPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~-~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+     .++..++ +++|..    .....+.+.+|++++++++||||+++++++.         ....++++|++
T Consensus        28 ~g~Vy~~~~~~~~~~~~~kv~iK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~---------~~~~~~v~~~~   98 (327)
T 3lzb_A           28 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL---------TSTVQLITQLM   98 (327)
T ss_dssp             SEEEEEEEECCTTCSCCEEEEEEEECCCSSCCCHHHHHHHHHHHTTCCBTTBCCCCEEEE---------SSSEEEEECCC
T ss_pred             CeEEEEEEEcCCCceEEEEEEEEeeccccCHHHHHHHHHHHHHHHhCCCCCeeEEEEEEe---------cCCceEEEEec
Confidence            678887     2233322 234432    3445678899999999999999999999852         23478999999


Q ss_pred             ccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-----------
Q psy7174          75 TKTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-----------  120 (188)
Q Consensus        75 ~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------  120 (188)
                      .++++..+.         ..+..++ .|++.||.|||+.+       |+||       +||+|||++..           
T Consensus        99 ~~g~L~~~l~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dikp~NIl~~~~~~~kL~DfG~a~~~~~~~~~~~~~  177 (327)
T 3lzb_A           99 PFGCLLDYVREHKDNIGSQYLLNWC-VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE  177 (327)
T ss_dssp             SSCBHHHHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCTTC--------------
T ss_pred             CCCcHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHhhCCCcCCCCCHHHEEEcCCCCEEEccCcceeEccCcccccccc
Confidence            999998753         3456666 79999999999998       6676       59999998642           


Q ss_pred             --cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         121 --VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       121 --~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                        .+|..|  +|||.+.+.. ++.++||||+||++|++++ |.+||.+.+.......+......+.+..
T Consensus       178 ~~~~t~~y--~aPE~~~~~~-~~~~~Di~slG~il~ell~~g~~p~~~~~~~~~~~~~~~~~~~~~~~~  243 (327)
T 3lzb_A          178 GGKVPIKW--MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPI  243 (327)
T ss_dssp             --CCCGGG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTT
T ss_pred             CCCccccc--cCHHHHcCCC-CChHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcc
Confidence              235579  9999998765 9999999999999999999 9999998777666665655544444443

>2j7t_A Serine/threonine-protein kinase 10; transferase, ATP-binding, cell cycle progression, phosphorylation, disease mutation, nucleotide- binding; HET: 274; 2.0A {Homo sapiens} PDB: 4aot_A* 3zz2_A* 2j51_A* 2jfl_A* 2jfm_A* 2uv2_A*

Probab=99.95  E-value=5.3e-27  Score=182.48  Aligned_cols=161  Identities=16%  Similarity=0.211  Sum_probs=122.3

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+........+.+.+|+++++.++||||+++++++        .++...++++||+.++++
T Consensus        32 ~g~V~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~l  103 (302)
T 2j7t_A           32 FGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY--------YHDGKLWIMIEFCPGGAV  103 (302)
T ss_dssp             TCCEEEEEETTTCCEEEEEEEC----CCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECC-CEEEEEECCTTEEH
T ss_pred             CeEEEEEEEcCCCcEEEEEEecCCCHHHHHHHHHHHHHHhcCCCCCEeeeeeee--------eeCCeEEEEEEeCCCCcH
Confidence            678887 2    223334444434445567889999999999999999999986        345678999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      ..+         ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..|+..
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~  182 (302)
T 2j7t_A          104 DAIMLELDRGLTEPQIQVVC-RQMLEALNFLHSKRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPY  182 (302)
T ss_dssp             HHHHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCSGGGEEECTTSCEEECCCHHHHHHHHHHHC-----CCGG
T ss_pred             HHHHHhhccCCCHHHHHHHH-HHHHHHHHHHhcCCcccCCCCHHHEEECCCCCEEEEECCCCccccccccccccccCChh
Confidence            875         23456666 89999999999998       5565       5999999742           457889


Q ss_pred             ccCCCCcccc----ccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         126 CTRGAPELLF----GARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       126 y~~~aPe~~~----~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      |  +|||++.    ....++.++|+||+|+++|+|++|..||.+.+.......+.
T Consensus       183 y--~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  235 (302)
T 2j7t_A          183 W--MAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPPHHELNPMRVLLKIA  235 (302)
T ss_dssp             G--CCHHHHHHHHTTSTTTTTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             h--cCCeeeccccCCCCCCchhhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHh
Confidence            9  9999984    22348899999999999999999999998877665554443

>4eut_A Serine/threonine-protein kinase TBK1; ATP binding, phosphorylation, transferase-transferas inhibitor complex; HET: BX7; 2.60A {Homo sapiens}

Probab=99.95  E-value=5.5e-28  Score=195.56  Aligned_cols=164  Identities=14%  Similarity=0.204  Sum_probs=124.3

Q ss_pred             cccccc-----cCCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+     +++..++|.+.+. .....+.+.+|++++++++||||+++++++..      .+....+++|||+.+++
T Consensus        22 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hpnIv~~~~~~~~------~~~~~~~lv~e~~~~g~   95 (396)
T 4eut_A           22 TANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKLNHKNIVKLFAIEEE------TTTRHKVLIMEFCPCGS   95 (396)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECGGGGGSCHHHHHHHHHHHHHCCCTTBCCEEEEEEC------TTTCCEEEEECCCTTEE
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccccchHHHHHHHHHHHHhcCCCCCCeEEEeecc------CCCCeeEEEEecCCCCC
Confidence            678887     2334445554443 23445678899999999999999999998622      33457799999999999


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc----------
Q psy7174          79 KARF-----------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR----------  119 (188)
Q Consensus        79 l~~~-----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~----------  119 (188)
                      |..+           +..+..++ .|++.||.|||+.+       |+||           +||+|||++.          
T Consensus        96 L~~~l~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~~~~~kL~DFG~a~~~~~~~~~~~  174 (396)
T 4eut_A           96 LYTVLEEPSNAYGLPESEFLIVL-RDVVGGMNHLRENGIVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS  174 (396)
T ss_dssp             HHHHTTSGGGTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEEEECTTSCEEEEECCGGGCEECCCGGGSSC
T ss_pred             HHHHHHhhhcccCCCHHHHHHHH-HHHHHHHHHHHHCCEEECCcCHHHEEEeecCCCceeEEEecCCCceEccCCCcccc
Confidence            9875           34566677 89999999999998       6666           5899999864          


Q ss_pred             ccccccccCCCCcccccc-------CCCCchhHHHHHHHHHHHHHhCCCCCCCC----ChHHHHHHHHh
Q psy7174         120 HVCTLYCTRGAPELLFGA-------RMYGVGIDMWAVGCIICELLLKAPFLPGE----SDLDQLTRIFQ  177 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~-------~~~~~~~DiwslG~il~el~~g~~pf~~~----~~~~~~~~i~~  177 (188)
                      ..||..|  +|||++...       ..++.++||||+||++|+|++|+.||.+.    ...+.+.++..
T Consensus       175 ~~gt~~y--~aPE~~~~~~~~~~~~~~~~~~~DiwSlG~il~el~tg~~Pf~~~~~~~~~~~~~~~~~~  241 (396)
T 4eut_A          175 LYGTEEY--LHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFEGPRRNKEVMYKIIT  241 (396)
T ss_dssp             SSSCCTT--CCHHHHHHHCC--CHHHHHHHHHHHHHHHHHHHHHHHSSCSEECTTCTTTCHHHHHHHHH
T ss_pred             ccCCccc--cCHHHhhccccccccccCCCcHHHHHHHHHHHHHHHHCCCCCCCCCcccchHHHHHHHhc
Confidence            3578899  999998641       23788999999999999999999999642    33444545443

>3coi_A Mitogen-activated protein kinase 13; P38D, P38delta, ERK, MAP kinase, PMK, STK26, stress-activated protein kinase, structural genomics, PSI; 2.09A {Homo sapiens}

Probab=99.95  E-value=5.4e-27  Score=186.68  Aligned_cols=173  Identities=25%  Similarity=0.388  Sum_probs=130.9

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|+.+++.++||||+++++++....  ........+++||++.+ 
T Consensus        37 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~~--~~~~~~~~~lv~e~~~~-  113 (353)
T 3coi_A           37 YGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDVFTPAS--SLRNFYDFYLVMPFMQT-  113 (353)
T ss_dssp             SEEEEEEEETTTTEEEEEEEESSTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCS--SGGGCCCCEEEEECCSE-
T ss_pred             CeEEEEEEECCCCCEEEEEEecccccchHHHHHHHHHHHHHHhcCCCCcccHhheEeccc--ccccceeEEEEeccccC-
Confidence            678887 2    223334444332  2334567889999999999999999999863211  11112345999999984 


Q ss_pred             cHHHH------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCC
Q psy7174          78 TKARF------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRG  129 (188)
Q Consensus        78 ~l~~~------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~  129 (188)
                      ++..+      +..+..++ .|++.||.|||+++       |+||       +||+|||++.        ..+|..|  +
T Consensus       114 ~l~~~~~~~~~~~~~~~i~-~qi~~al~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~t~~y--~  190 (353)
T 3coi_A          114 DLQKIMGLKFSEEKIQYLV-YQMLKGLKYIHSAGVVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWY--R  190 (353)
T ss_dssp             EGGGTTTSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSSCCGGGEEECTTCCEEECSTTCTTC--------CCSBCC--S
T ss_pred             CHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEeECCCCcEEEeecccccCCCCCccccccCcCc--C
Confidence            66553      45666777 89999999999998       5666       6999999864        4578899  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      |||++.+...++.++||||+||++|+|++|+.||.+.+..+.+..+.+..+.|+
T Consensus       191 aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~~~  244 (353)
T 3coi_A          191 APEVILSWMHYNQTVDIWSVGCIMAEMLTGKTLFKGKDYLDQLTQILKVTGVPG  244 (353)
T ss_dssp             CHHHHSCCSCCCTTHHHHHHHHHHHHHHHSSCSSBSSCHHHHHHHHHHHHCBCC
T ss_pred             CHHHHhCcCCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCC
Confidence            999987744589999999999999999999999999998888888877666543

>3pls_A Macrophage-stimulating protein receptor; protein kinase, CIS autophosphorylation conformation, recept tyrosine kinase, AMP-PNP, unphosphorylated; HET: ANP; 2.24A {Homo sapiens} SCOP: d.144.1.7

Probab=99.95  E-value=1.1e-26  Score=180.24  Aligned_cols=171  Identities=17%  Similarity=0.206  Sum_probs=126.6

Q ss_pred             cccccc-c---CC----cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q---SK----WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~---~~----~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .   +.    ..++|.+.+. .....+.+.+|++++++++||||+++++++.       ..+...++++||+.
T Consensus        34 ~g~Vy~~~~~~~~~~~~~~aiK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~~~v~e~~~  106 (298)
T 3pls_A           34 FGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVLALIGIML-------PPEGLPHVLLPYMC  106 (298)
T ss_dssp             TEEEEEEEEECSSSCEEEEEEEEETTCCSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEC-------CSSSCCEEEECCCT
T ss_pred             CceEEEEEEecCCCceeeeeeeeccccccHHHHHHHHHHHHHHHhCCCCCeeeEEEEEe-------cCCCCcEEEEeccc
Confidence            677886 1   11    1223333332 3345677899999999999999999999862       12334589999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      ++++..+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.             
T Consensus       107 ~~~L~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  185 (298)
T 3pls_A          107 HGDLLQFIRSPQRNPTVKDLISFG-LQVARGMEYLAEQKFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQH  185 (298)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECCTTSSCTTTTGGGGCSCCS
T ss_pred             CCCHHHHHhccccCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEeCcCCCcccccCCcccccccC
Confidence            99998862         4456666 79999999999998       6665       6999999864             


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                        ..++..|  +|||.+.+.. ++.++||||+||++|+|++ +.+||.+.+..+....+......+.+..
T Consensus       186 ~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (298)
T 3pls_A          186 RHARLPVKW--TALESLQTYR-FTTKSDVWSFGVLLWELLTRGAPPYRHIDPFDLTHFLAQGRRLPQPEY  252 (298)
T ss_dssp             SCTTCGGGG--SCHHHHTTCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCGGGHHHHHHTTCCCCCCTT
T ss_pred             cCCCCCccc--cChhhhccCC-CChhhchhhHHHHHHHHhhCCCCCCccCCHHHHHHHhhcCCCCCCCcc
Confidence              2345678  9999998765 8999999999999999999 5677776666666655555544444443

>4f0f_A Serine/threonine-protein kinase ROCO4; LRRK2, ATP-binding, nucleotide serine/threonine-protein kinase, transferase, signaling Pro; HET: ACP; 1.80A {Dictyostelium discoideum} PDB: 4f0g_A 4f1t_A* 4f1m_A* 4f1o_A*

Probab=99.95  E-value=9.8e-27  Score=179.88  Aligned_cols=126  Identities=16%  Similarity=0.148  Sum_probs=104.1

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---------HHHHHHHHHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---------~~~~~~~~~~qi~~gl~   99 (188)
                      +.+.+|++++++++||||+++++++.          ...+++|||+.++++...         ...+..++ .|++.||.
T Consensus        68 ~~~~~E~~~l~~l~h~~i~~~~~~~~----------~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~l~~~l~  136 (287)
T 4f0f_A           68 QEFQREVFIMSNLNHPNIVKLYGLMH----------NPPRMVMEFVPCGDLYHRLLDKAHPIKWSVKLRLM-LDIALGIE  136 (287)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCEEEEET----------TTTEEEEECCTTCBHHHHHHCTTSCCCHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHhCCCCCchhhheeec----------CCCeEEEEecCCCCHHHHHhcccCCccHHHHHHHH-HHHHHHHH
Confidence            67899999999999999999999851          234799999999998664         34456666 79999999


Q ss_pred             HHhhcC---------CCCe------------EEEecCCccc--------ccccccccCCCCccccc-cCCCCchhHHHHH
Q psy7174         100 ALKSSM---------PALL------------KKFVGIGIGR--------HVCTLYCTRGAPELLFG-ARMYGVGIDMWAV  149 (188)
Q Consensus       100 ~lH~~~---------~~~i------------lkl~dfg~~~--------~~~~~~y~~~aPe~~~~-~~~~~~~~Diwsl  149 (188)
                      |||+++         |+|+            +||+|||++.        ..||..|  +|||++.. ...++.++||||+
T Consensus       137 ~lH~~~~~ivH~dikp~Nil~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~g~~~y--~aPE~~~~~~~~~~~~~Di~sl  214 (287)
T 4f0f_A          137 YMQNQNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQSVHSVSGLLGNFQW--MAPETIGAEEESYTEKADTYSF  214 (287)
T ss_dssp             HHHTSSSCCBCSCCSGGGEEESCCCTTCSCCEEECCCTTCBCCSSCEECCCCCCTT--SCGGGSSCSSCEECHHHHHHHH
T ss_pred             HHHhCCCCeecCCCCcceEEEeccCCCCceeEEeCCCCccccccccccccCCCccc--cCchhhccCCCCcCchhhHHHH
Confidence            999976         4444            6999999864        5678899  99999843 2237899999999


Q ss_pred             HHHHHHHHhCCCCCCCCC
Q psy7174         150 GCIICELLLKAPFLPGES  167 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~  167 (188)
                      ||++|+|++|+.||.+.+
T Consensus       215 G~~l~~l~~g~~pf~~~~  232 (287)
T 4f0f_A          215 AMILYTILTGEGPFDEYS  232 (287)
T ss_dssp             HHHHHHHHHSSCTTTTCC
T ss_pred             HHHHHHHHcCCCCCcccc
Confidence            999999999999997654

>3kmu_A ILK, integrin-linked kinase; cell adhesion, ANK repeat, ATP-binding, cell junction, cell membrane, integrin-binding protein, membrane, nucleotide- binding; 1.80A {Homo sapiens} SCOP: d.144.1.0 PDB: 3kmw_A* 3rep_A*

Probab=99.95  E-value=6.3e-27  Score=179.04  Aligned_cols=164  Identities=11%  Similarity=0.083  Sum_probs=124.3

Q ss_pred             cccccc---cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ---QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+   .++..++|.++..  .....+.+.+|++++++++||||+++++++..      ......++++||+.+++|
T Consensus        23 ~g~V~~~~~~~~~~avK~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~L   96 (271)
T 3kmu_A           23 SGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQS------PPAPHPTLITHWMPYGSL   96 (271)
T ss_dssp             TEEEEEEEETTEEEEEEEECCTTCCHHHHHHHHHHGGGGCCCSCTTEECEEEEECT------TTSSSCEEEEECCTTCBH
T ss_pred             cceEEEEEECCeeEEEEEecccccCHHHHHHHHHHHHHHHhcCCCchhheEEEEcc------CCCCCeEeeecccCCCcH
Confidence            677887   2233344444432  34556778999999999999999999998622      234678999999999999


Q ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHhhcC---------CCCe-------EEEecCCcc------ccccccccc
Q psy7174          80 ARFY----------SHLRYLENQQILEGLQALKSSM---------PALL-------KKFVGIGIG------RHVCTLYCT  127 (188)
Q Consensus        80 ~~~~----------~~~~~~~~~qi~~gl~~lH~~~---------~~~i-------lkl~dfg~~------~~~~~~~y~  127 (188)
                      ..+.          ..+..++ .|++.||.|||+.+         |+|+       ++++|||+.      ...+|+.| 
T Consensus        97 ~~~l~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~l~~~~~~~~~~~~~~~~t~~y-  174 (271)
T 3kmu_A           97 YNVLHEGTNFVVDQSQAVKFA-LDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMYAPAW-  174 (271)
T ss_dssp             HHHHHSCSSCCCCHHHHHHHH-HHHHHHHHHHTTSSSCCTTCCCSGGGEEECTTSCEEEEGGGSCCTTSCTTCBSCGGG-
T ss_pred             HHHHhhcccCCCCHHHHHHHH-HHHHHHHHHHhcCCCceecCCCccceEEEcCCcceeEEeccceeeecccCccCCccc-
Confidence            8862          3556666 89999999999965         5555       477777653      25678899 


Q ss_pred             CCCCccccccC--CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         128 RGAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       128 ~~aPe~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                       +|||.+.+..  .++.++||||+||++|++++|+.||.+.+..+....+..
T Consensus       175 -~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~  225 (271)
T 3kmu_A          175 -VAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL  225 (271)
T ss_dssp             -SCHHHHHSCGGGSCHHHHHHHHHHHHHHHHHHCSCTTTTSCHHHHHHHHHH
T ss_pred             -cChhhhccCCCCCCCchhhHHHHHHHHHHHHhCCCCccccChHHHHHHHHh
Confidence             9999997643  134489999999999999999999998887776655543

>3dbq_A Dual specificity protein kinase TTK; MPS1 structure, kinase activation, phosphorylation, ATP- binding, nucleotide-binding, phosphoprotein; 2.70A {Homo sapiens}

Probab=99.95  E-value=7.1e-27  Score=185.52  Aligned_cols=151  Identities=17%  Similarity=0.223  Sum_probs=115.2

Q ss_pred             cccccc-cCCcccccccccc-----chhhhhHHHHHHHHHHhCCC--CCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QSKWSPNTPMARC-----DVNVETQAKAEGKQDRRLDY--ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~~~~~~~~i~~~-----~~~~~~~~~~E~~il~~l~h--~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ ..+-...+|+|..     .....+.+.+|++++++++|  |||+++++++        .++...+++|| +.+
T Consensus        22 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~--------~~~~~~~lv~e-~~~   92 (343)
T 3dbq_A           22 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE--------ITDQYIYMVME-CGN   92 (343)
T ss_dssp             SEEEEEEECTTSCEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEEC-CCS
T ss_pred             CeEEEEEEeCCCCEEEEEEeeccccchHHHHHHHHHHHHHHhhhhcCCceEEEeeeE--------eeCCEEEEEEe-CCC
Confidence            677887 2222223444432     33445678899999999986  9999999986        44668899999 567


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc-------------ccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR-------------HVC  122 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~-------------~~~  122 (188)
                      ++|..+        ...+..++ .|++.||.|||+.+       |+||      +||+|||++.             ..|
T Consensus        93 ~~L~~~l~~~~~~~~~~~~~i~-~qi~~al~~lH~~~iiHrDikp~NIll~~~~~kl~DFG~a~~~~~~~~~~~~~~~~g  171 (343)
T 3dbq_A           93 IDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG  171 (343)
T ss_dssp             EEHHHHHHHSCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCCC------------CC
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCcceEEEECCcEEEeecccccccCcccccccCCCCcC
Confidence            788775        23466677 89999999999998       6676      5999999863             357


Q ss_pred             cccccCCCCccccc----------cCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFG----------ARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~----------~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      |+.|  +|||++.+          ...++.++||||+||++|+|++|+.||.+..
T Consensus       172 t~~y--~aPE~~~~~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~pf~~~~  224 (343)
T 3dbq_A          172 TVNY--MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  224 (343)
T ss_dssp             CCSS--CCHHHHHHCC-----------CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CcCc--CCHHHHhhccccccccccccCCCchhhHHHHHHHHHHHHhCCCcchhhh
Confidence            8999  99999854          1348899999999999999999999997643

>3e3p_A Protein kinase, putative glycogen synthase kinase; leishmaniasis, transferase; 2.00A {Leishmania major}

Probab=99.95  E-value=8.4e-27  Score=185.62  Aligned_cols=176  Identities=23%  Similarity=0.369  Sum_probs=129.3

Q ss_pred             cccccc-cCCcc-cccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ ..+.. ..+++|..  .....+...+|++.++.++||||++++++|..... ........+++|||+.++.+.
T Consensus        36 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~l~~l~h~niv~~~~~~~~~~~-~~~~~~~~~lv~e~~~~~l~~  114 (360)
T 3e3p_A           36 FGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQIMQDLAVLHHPNIVQLQSYFYTLGE-RDRRDIYLNVVMEYVPDTLHR  114 (360)
T ss_dssp             ---CEEEEETTTCCEEEEEEEECCTTCCCHHHHHHHHHHHHCCTTBCCEEEEEEEECS-SCTTCEEEEEEEECCSCBHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEecCccccHHHHHHHHHHHhcCCCCcccHHHhhhcccc-ccccceeEEEEeecccccHHH
Confidence            688887 22221 23444432  33445567888899999999999999998744211 112233478999999987554


Q ss_pred             HH-----------HHHHHHHHHHHHHHHHHHHh--hcC-------CCCe--------EEEecCCccc----------ccc
Q psy7174          81 RF-----------YSHLRYLENQQILEGLQALK--SSM-------PALL--------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        81 ~~-----------~~~~~~~~~~qi~~gl~~lH--~~~-------~~~i--------lkl~dfg~~~----------~~~  122 (188)
                      .+           ...+..++ .|++.||.|||  +.+       |+||        +||+|||++.          ..|
T Consensus       115 ~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~~~ivH~Dlkp~NIll~~~~~~~kl~Dfg~a~~~~~~~~~~~~~g  193 (360)
T 3e3p_A          115 CCRNYYRRQVAPPPILIKVFL-FQLIRSIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYIC  193 (360)
T ss_dssp             HHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHTSTTTCCBCSCCCGGGEEEETTTTEEEECCCTTCBCCCTTSCCCSTTS
T ss_pred             HHHHHhhcccCCCHHHHHHHH-HHHHHHHHHHhCCCCCeecCcCCHHHEEEeCCCCcEEEeeCCCceecCCCCCcccccC
Confidence            33           23455666 79999999999  766       4454        6999999864          356


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      |..|  +|||++.+...++.++||||+||++|+|++|++||.+.+....+..+.+..+.|+.
T Consensus       194 t~~y--~aPE~~~~~~~~~~~~Di~slG~il~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  253 (360)
T 3e3p_A          194 SRYY--RAPELIFGNQHYTTAVDIWSVGCIFAEMMLGEPIFRGDNSAGQLHEIVRVLGCPSR  253 (360)
T ss_dssp             CGGG--CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             Ccce--eCHHHHcCCCCCCcHHHHHHHHHHHHHHHhCCCCcCCCChHHHHHHHHHHcCCCCH
Confidence            8889  99999876555899999999999999999999999999999999999887776643

>3vhe_A Vascular endothelial growth factor receptor 2; kinase domain, kinase, transferase-transferase inhibitor COM; HET: 42Q; 1.55A {Homo sapiens} PDB: 1y6a_A* 1y6b_A* 3vhk_A* 3vid_A* 3hng_A*

Probab=99.95  E-value=5.2e-27  Score=186.77  Aligned_cols=136  Identities=20%  Similarity=0.278  Sum_probs=110.2

Q ss_pred             hhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------
Q psy7174          25 VNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------   84 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------   84 (188)
                      ....+.+.+|+++++++ +||||+++++++.       ..+...++++||+.+|+|..+..                   
T Consensus        66 ~~~~~~~~~E~~~l~~l~~hpniv~~~~~~~-------~~~~~~~iv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  138 (359)
T 3vhe_A           66 HSEHRALMSELKILIHIGHHLNVVNLLGACT-------KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTKGARFRQG  138 (359)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------STTSCCEEEEECCTTEEHHHHHHTTTTSBCSCC---------
T ss_pred             HHHHHHHHHHHHHHHhhcCCcceeeeeeeee-------cCCCceEEEEEecCCCcHHHHHHhccccccccccccchhhcc
Confidence            34456789999999999 7999999999862       22345899999999999876532                   


Q ss_pred             -------------------------------------------------------HHHHHHHHHHHHHHHHHhhcC----
Q psy7174          85 -------------------------------------------------------HLRYLENQQILEGLQALKSSM----  105 (188)
Q Consensus        85 -------------------------------------------------------~~~~~~~~qi~~gl~~lH~~~----  105 (188)
                                                                             .+..++ .|++.||.|||+++    
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~ql~~aL~~LH~~~ivH~  217 (359)
T 3vhe_A          139 KDYVGAIPVDLKRRLDSITSSQSSASSGFVEEKSLSDVEEEEAPEDLYKDFLTLEHLICYS-FQVAKGMEFLASRKCIHR  217 (359)
T ss_dssp             ---------------------------------------------CTTTTCBCHHHHHHHH-HHHHHHHHHHHHTTCCCS
T ss_pred             cccccccchhhhccccccCccccccccccccccccchhhhcccccchhccccCHHHHHHHH-HHHHHHHHHHHHCCcccC
Confidence                                                                   244466 79999999999998    


Q ss_pred             ---CCCe-------EEEecCCccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCC
Q psy7174         106 ---PALL-------KKFVGIGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAP  161 (188)
Q Consensus       106 ---~~~i-------lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~  161 (188)
                         |+||       +||+|||++.             ..+|..|  +|||++.+.. ++.++||||+||++|+|++ |.+
T Consensus       218 Dikp~NIll~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~t~~y--~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~  294 (359)
T 3vhe_A          218 DLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW--MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGAS  294 (359)
T ss_dssp             CCSGGGEEECGGGCEEECCCGGGSCTTSCTTCEEC--CEECGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCC
T ss_pred             CCChhhEEEcCCCcEEEEeccceeeecccccchhccccCCCcee--EChhhhcCCC-CCchhhhhhHHHHHHHHHhcCCC
Confidence               6666       5999999864             2356679  9999998755 9999999999999999998 999


Q ss_pred             CCCCCChHHH
Q psy7174         162 FLPGESDLDQ  171 (188)
Q Consensus       162 pf~~~~~~~~  171 (188)
                      ||.+.+....
T Consensus       295 p~~~~~~~~~  304 (359)
T 3vhe_A          295 PYPGVKIDEE  304 (359)
T ss_dssp             SSTTCCCSHH
T ss_pred             CCCccchhHH
Confidence            9988664333

>2j0j_A Focal adhesion kinase 1; cell migration, FERM, transferase, integrin signaling; HET: 4ST; 2.80A {Gallus gallus} PDB: 2j0k_A*

Probab=99.95  E-value=1.1e-26  Score=198.93  Aligned_cols=171  Identities=19%  Similarity=0.251  Sum_probs=132.6

Q ss_pred             cccccc-c----CCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    +.....+++|..    .....+.+.+|+.++++++||||+++++++         .+...+++|||+.
T Consensus       403 fG~Vy~a~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~---------~~~~~~lv~E~~~  473 (656)
T 2j0j_A          403 FGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI---------TENPVWIIMELCT  473 (656)
T ss_dssp             SCCEEEEEECCSSSCCEEEEEEECSSTTCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---------CSSSCEEEEECCT
T ss_pred             CEEEEEEEEecCCCccEEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE---------ecCceEEEEEcCC
Confidence            788887 1    111124445542    334457789999999999999999999985         2346899999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------  120 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------  120 (188)
                      +|+|..+.         ..+..++ .|++.||.|||+++       |+||       +||+|||++..            
T Consensus       474 ~g~L~~~l~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~givHrDikp~NILl~~~~~vkL~DFG~a~~~~~~~~~~~~~~  552 (656)
T 2j0j_A          474 LGELRSFLQVRKFSLDLASLILYA-YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG  552 (656)
T ss_dssp             TCBHHHHHHHTTTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECCCCCCCSCCC---------
T ss_pred             CCcHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHhCCccccccchHhEEEeCCCCEEEEecCCCeecCCCcceeccCC
Confidence            99998763         3345566 79999999999998       6677       59999998652            


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .++..|  +|||++.+.. ++.++||||+||++|||++ |.+||.+.+..+....+......+.|..+|
T Consensus       553 ~~t~~y--~aPE~~~~~~-~~~~~DiwSlG~il~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  618 (656)
T 2j0j_A          553 KLPIKW--MAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP  618 (656)
T ss_dssp             -CCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHHTCCCCCCTTCC
T ss_pred             CCCcce--eCHHHhcCCC-CCchhhHHHHHHHHHHHHHcCCCCCCCCCHHHHHHHHHcCCCCCCCcccc
Confidence            235679  9999997755 9999999999999999996 999999998888888887766555555443

>2owb_A Serine/threonine-protein kinase PLK1; catalytic domain, POLO-like kinase1, transfera; HET: 626; 2.10A {Homo sapiens} PDB: 2ou7_A* 3fc2_A* 3thb_A*

Probab=99.95  E-value=1.2e-26  Score=183.57  Aligned_cols=160  Identities=19%  Similarity=0.266  Sum_probs=126.0

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+++++.++||||+++++++        .++...++++||+.+
T Consensus        54 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~  125 (335)
T 2owb_A           54 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF--------EDNDFVFVVLELCRR  125 (335)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEechhhhcCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------ecCCeEEEEEecCCC
Confidence            677887 2    223334444332   234567788999999999999999999986        445678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++..+        ...+..++ .|++.||.|||+++       |+||       +||+|||++.           ..|+
T Consensus       126 ~~L~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~gt  204 (335)
T 2owb_A          126 RSLLELHKRRKALTEPEARYYL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT  204 (335)
T ss_dssp             CBHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSC
T ss_pred             CCHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCCEecCCCchhEEEcCCCCEEEeeccCceecccCcccccccCCC
Confidence            999876        23466677 89999999999998       5565       6999999864           3467


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      ..|  +|||++.+.. ++.++||||||+++|+|++|+.||.+.+..+....+.
T Consensus       205 ~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~  254 (335)
T 2owb_A          205 PNY--IAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK  254 (335)
T ss_dssp             CSS--CCHHHHHTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             ccc--cCHHHhccCC-CCchhhHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHh
Confidence            889  9999998765 8999999999999999999999998877666555443

>2pvf_A Fibroblast growth factor receptor 2; kinase domain fold consisting of N- and C-lobes, transferase; HET: PTR ACP; 1.80A {Homo sapiens} PDB: 3cly_A* 2pzr_A* 2pzp_A* 2pvy_A* 2pz5_A* 2q0b_A* 2pwl_A* 2py3_A* 3ri1_A* 1gjo_A 1oec_A* 3b2t_A* 3gql_A* 3gqi_A* 1fgk_A 1fgi_A* 1agw_A 2fgi_A* 3js2_A* 3ky2_A ...

Probab=99.94  E-value=1.4e-26  Score=183.03  Aligned_cols=149  Identities=19%  Similarity=0.245  Sum_probs=119.7

Q ss_pred             hhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------
Q psy7174          25 VNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------   84 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------   84 (188)
                      ....+.+.+|+++++++ +||||+++++++        .++...++++||+.+++|..+..                   
T Consensus        81 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  152 (334)
T 2pvf_A           81 EKDLSDLVSEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEE  152 (334)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSCCEEEEECCTTCBHHHHHHTTSCTTCCSCC--------
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCEeeEEEEE--------ccCCceEEEEECCCCCcHHHHHHHhccccccccccccccccc
Confidence            34556789999999999 899999999986        44667899999999999987632                   


Q ss_pred             -----HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCc
Q psy7174          85 -----HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPE  132 (188)
Q Consensus        85 -----~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe  132 (188)
                           .+..++ .|++.||.|||+.+       |+||       +||+|||++..             .++..|  +|||
T Consensus       153 ~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE  229 (334)
T 2pvf_A          153 QMTFKDLVSCT-YQLARGMEYLASQKCIHRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKTTNGRLPVKW--MAPE  229 (334)
T ss_dssp             CCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECTTTSSEECCSCCCCCGGG--CCHH
T ss_pred             cCCHHHHHHHH-HHHHHHHHHHHhCCeeCCCCccceEEEcCCCCEEEccccccccccccccccccCCCCcccce--eChH
Confidence                 345566 79999999999998       6666       59999998642             234568  9999


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCC
Q psy7174         133 LLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSED  185 (188)
Q Consensus       133 ~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~  185 (188)
                      ++.+.. ++.++||||+||++|+|++ |..||.+.+..+....+......+.+.
T Consensus       230 ~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~~~~~~~~~~~~~  282 (334)
T 2pvf_A          230 ALFDRV-YTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLLKEGHRMDKPA  282 (334)
T ss_dssp             HHHHCE-ECHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHHTCCCCCCT
T ss_pred             HhcCCC-cChHHHHHHHHHHHHHHHhCCCCCcCcCCHHHHHHHHhcCCCCCCCc
Confidence            997755 8999999999999999999 999999888777666665554444333

>2yex_A Serine/threonine-protein kinase CHK1; transferase, cell cycle; HET: YEX; 1.30A {Homo sapiens} PDB: 2x8e_A* 2ydk_A* 2ydj_A* 2yer_A* 2ydi_A* 1nvq_A* 1nvr_A* 1nvs_A* 2wmq_A* 2wmr_A* 2wms_A* 2wmt_A* 2wmu_A* 2wmv_A* 2wmw_A* 2wmx_A* 2x8d_A* 2x8i_A* 2xey_A* 2xez_A* ...

Probab=99.94  E-value=1.1e-26  Score=178.32  Aligned_cols=152  Identities=16%  Similarity=0.162  Sum_probs=119.3

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .....+.+.+|+++++.++||||+++++++        .++...++++|++.+++
T Consensus        20 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   91 (276)
T 2yex_A           20 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR--------REGNIQYLFLEYCSGGE   91 (276)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEEGGGCTTHHHHHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCTTEE
T ss_pred             CcEEEEEEECCCCcEEEEEEeeeccchhhhHHHHHHHHHHHhcCCCCceeeeeEE--------EcCCEEEEEEEecCCCc
Confidence            678887 2    223334443322 234457789999999999999999999985        34567899999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCT  123 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~  123 (188)
                      +..+        ...+..++ .|++.||.|||+.+       |+|+       +|++|||++.             ..|+
T Consensus        92 L~~~l~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~  170 (276)
T 2yex_A           92 LFDRIEPDIGMPEPDAQRFF-HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT  170 (276)
T ss_dssp             GGGGSBTTTBCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSC
T ss_pred             HHHHHhhccCCCHHHHHHHH-HHHHHHHHHHHhCCeeccCCChHHEEEccCCCEEEeeCCCccccCCCcchhcccCCccc
Confidence            8765        34566677 89999999999998       5555       6999999754             3467


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      ..|  +|||.+.+...++.++|+||+|+++|++++|+.||.+.+
T Consensus       171 ~~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~  212 (276)
T 2yex_A          171 LPY--VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPS  212 (276)
T ss_dssp             GGG--CCGGGGTCSSBCHHHHHHHHHHHHHHHHHHSSCCCSCSC
T ss_pred             cCc--cChHHHhcCCCCCCcchHHHHHHHHHHHHhCCCCCCCCc
Confidence            789  999999775534789999999999999999999997654

>1byg_A CSK, protein (C-terminal SRC kinase); protein kinase, phosphorylation, staurosporine, transferase; HET: STU; 2.40A {Homo sapiens} SCOP: d.144.1.7 PDB: 3d7u_A 3d7t_A*

Probab=99.94  E-value=6.2e-27  Score=180.34  Aligned_cols=161  Identities=17%  Similarity=0.202  Sum_probs=118.9

Q ss_pred             cccccc---cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+   .++..++|.++.  ....+.+.+|++++++++||||+++++++.       ..+...++++||+.+++|..
T Consensus        34 ~g~V~~~~~~~~~vavK~~~~--~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~-------~~~~~~~lv~e~~~~~~L~~  104 (278)
T 1byg_A           34 FGDVMLGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIV-------EEKGGLYIVTEYMAKGSLVD  104 (278)
T ss_dssp             SCEEEEEEETTEEEEEEECCC--CC--HHHHHTHHHHTTCCCTTBCCEEEEEC-------CC--CCEEEECCCTTEEHHH
T ss_pred             CceEEEEEEcCCEEEEEEecc--hhHHHHHHHHHHHHHhCCCCCEeeEEEEEE-------cCCCceEEEEecCCCCCHHH
Confidence            577777   222223333332  235577899999999999999999999752       22346899999999999987


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCC
Q psy7174          82 FY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRG  129 (188)
Q Consensus        82 ~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~  129 (188)
                      +.          ..+..++ .|++.||.|||+++       |+|+       +||+|||++.        ..++..|  +
T Consensus       105 ~l~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~y--~  181 (278)
T 1byg_A          105 YLRSRGRSVLGGDCLLKFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW--T  181 (278)
T ss_dssp             HHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTT--S
T ss_pred             HHHhcccccCCHHHHHHHH-HHHHHHHHHHHhCCccccCCCcceEEEeCCCcEEEeeccccccccccccCCCccccc--c
Confidence            63          2245566 79999999999998       5565       5999999854        3456779  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |||.+.+.. ++.++|+||+|+++|+|++ |+.||.+.+..+....+...
T Consensus       182 aPE~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~~~~~~~~~~  230 (278)
T 1byg_A          182 APEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKG  230 (278)
T ss_dssp             CHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTT
T ss_pred             CHHHhCCCC-CCchhcHHHHHHHHHHHHhCCCCCCCCCCHHHHHHHHhcC
Confidence            999997755 8999999999999999998 99999877665555555443

>3cok_A Serine/threonine-protein kinase PLK4; POLO-like kinase 4, SAK, STK18, PSI, structural genomics, protein structure initiative; HET: ANP; 2.25A {Homo sapiens}

Probab=99.94  E-value=5e-27  Score=180.75  Aligned_cols=151  Identities=19%  Similarity=0.284  Sum_probs=102.8

Q ss_pred             cccccc-cC----Ccccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .+    +..++|.+.+.   .....+.+.+|++++++++||||+++++++        .++...++++||+.+
T Consensus        24 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~   95 (278)
T 3cok_A           24 FAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELYNYF--------EDSNYVYLVLEMCHN   95 (278)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTBCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             ceEEEEEEEccCCceEEEEEeehhhhhhhhHHHHHHHHHHHHHhCCCCCeEeEEEEE--------ccCCeEEEEEecCCC
Confidence            677887 22    22334443332   122346789999999999999999999986        445678999999999


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +++..+         ...+..++ .|++.||.|||+++       |+|+       +||+|||++.           ..+
T Consensus        96 ~~L~~~l~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dl~p~Nili~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  174 (278)
T 3cok_A           96 GEMNRYLKNRVKPFSENEARHFM-HQIITGMLYLHSHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCG  174 (278)
T ss_dssp             EEHHHHHHTCSSCCCHHHHHHHH-HHHHHHHHHHHHTTEECSSCCGGGEEECTTCCEEECCCTTCEECC-----------
T ss_pred             CcHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHEEEcCCCCEEEEeecceeeccCCCCcceeccC
Confidence            999875         34566677 89999999999998       5666       5999999754           346


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      |..|  +|||.+.+.. ++.++|+||+|+++|+|++|++||.+.+
T Consensus       175 ~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~  216 (278)
T 3cok_A          175 TPNY--ISPEIATRSA-HGLESDVWSLGCMFYTLLIGRPPFDTDT  216 (278)
T ss_dssp             --------------------CTHHHHHHHHHHHHHHSSCSSCCCS
T ss_pred             CCCc--CCcchhcCCC-CCchhhHHHHHHHHHHHHhCCCCCCChh
Confidence            7889  9999997755 8999999999999999999999997643

>2nru_A Interleukin-1 receptor-associated kinase 4; inhibitor, IRAK, transferase; HET: TPO SEP T12; 2.00A {Homo sapiens} PDB: 2nry_A* 2oib_A* 2oic_A* 2oid_A* 2o8y_A*

Probab=99.94  E-value=1.6e-26  Score=180.35  Aligned_cols=149  Identities=17%  Similarity=0.176  Sum_probs=117.9

Q ss_pred             cccccc---cCCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ---QSKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+   .++..++|.+.+.    .....+.+.+|++++++++||||+++++++        .++...++++||+.++
T Consensus        44 ~g~Vy~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~  115 (307)
T 2nru_A           44 FGVVYKGYVNNTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLGFS--------SDGDDLCLVYVYMPNG  115 (307)
T ss_dssp             SEEEEEEESSSCEEEEEEECCCTTSCTTTHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTC
T ss_pred             CeEEEEEEECCceEEEEEEecccCcchHHHHHHHHHHHHHHHhcCCCCeEEEEEEE--------ecCCceEEEEEecCCC
Confidence            577787   3333344444432    233456789999999999999999999986        4456789999999999


Q ss_pred             cHHHHH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------
Q psy7174          78 TKARFY-----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        78 ~l~~~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      ++..+.           ..+..++ .|++.||.|||+.+       |+||       +||+|||++.             
T Consensus       116 ~L~~~l~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~i~H~dlkp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  194 (307)
T 2nru_A          116 SLLDRLSCLDGTPPLSWHMRCKIA-QGAANGINFLHENHHIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMTSR  194 (307)
T ss_dssp             BHHHHHHTGGGCCCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECCSCSSCEECSS
T ss_pred             cHHHHHHhccCCCCCCHHHHHHHH-HHHHHHHHHHhcCCeecCCCCHHHEEEcCCCcEEEeecccccccccccccccccc
Confidence            998753           3455566 79999999999998       6666       5999999753             


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ..||..|  +|||.+.+ . ++.++|+||||+++|+|++|.+||.+.
T Consensus       195 ~~g~~~y--~aPE~~~~-~-~~~~~Dv~slG~il~~l~~g~~p~~~~  237 (307)
T 2nru_A          195 IVGTTAY--MAPEALRG-E-ITPKSDIYSFGVVLLEIITGLPAVDEH  237 (307)
T ss_dssp             CCSCGGG--CCHHHHTT-E-ECTHHHHHHHHHHHHHHHHCCCSBCTT
T ss_pred             cCCCcCc--CChHHhcC-C-CCccchhHHHHHHHHHHHHCCCCcccC
Confidence            3568889  99999865 3 789999999999999999999999754

>1xbb_A Tyrosine-protein kinase SYK; gleevec, STI-571, imatinib, spleen typrosine kinase, active conformation, structural genomics, structural genomix; HET: STI; 1.57A {Homo sapiens} SCOP: d.144.1.7 PDB: 1xba_A* 1xbc_A* 3fqe_A* 3fqh_A* 3fqs_A* 3emg_A* 3srv_A* 4dfl_A* 4dfn_A* 3vf8_A* 3vf9_A*

Probab=99.94  E-value=7.3e-27  Score=181.16  Aligned_cols=141  Identities=16%  Similarity=0.224  Sum_probs=115.1

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEG   97 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~g   97 (188)
                      ...+.+.+|+++++.++||||+++++++         .+...++++|++.+++|..+.        ..+..++ .|++.|
T Consensus        60 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~---------~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~i~-~qi~~~  129 (291)
T 1xbb_A           60 ALKDELLAEANVMQQLDNPYIVRMIGIC---------EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIELV-HQVSMG  129 (291)
T ss_dssp             HHHHHHHHHHHHHHTCCCTTBCCEEEEE---------ESSSEEEEEECCTTEEHHHHHHHCTTCCHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCEEEEEEEE---------CCCCcEEEEEeCCCCCHHHHHHhCcCCCHHHHHHHH-HHHHHH
Confidence            3457789999999999999999999984         245689999999999998863        3456667 899999


Q ss_pred             HHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCCCCchhHHHHH
Q psy7174          98 LQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARMYGVGIDMWAV  149 (188)
Q Consensus        98 l~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~~~~~~Diwsl  149 (188)
                      |.|||+.+       |+||       +||+|||++..              .++..|  +|||.+.+.. ++.++|||||
T Consensus       130 l~~LH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~sl  206 (291)
T 1xbb_A          130 MKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKW--YAPECINYYK-FSSKSDVWSF  206 (291)
T ss_dssp             HHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC----CCCGGG--CCHHHHHHCE-EEHHHHHHHH
T ss_pred             HHHHHhCCeEcCCCCcceEEEeCCCcEEEccCCcceeeccCCCcccccccCCCCcee--eChHHhccCC-CChhhhHHHH
Confidence            99999998       6666       59999998642              234568  9999997755 8999999999


Q ss_pred             HHHHHHHHh-CCCCCCCCChHHHHHHHHhhc
Q psy7174         150 GCIICELLL-KAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       150 G~il~el~~-g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |+++|+|++ |+.||.+.+..+....+....
T Consensus       207 G~il~~l~~~g~~p~~~~~~~~~~~~~~~~~  237 (291)
T 1xbb_A          207 GVLMWEAFSYGQKPYRGMKGSEVTAMLEKGE  237 (291)
T ss_dssp             HHHHHHHHTTTCCSSTTCCHHHHHHHHHTTC
T ss_pred             HHHHHHHHhcCCCCCCCCCHHHHHHHHHcCC
Confidence            999999999 999998877766555554433

>2rku_A Serine/threonine-protein kinase PLK1; structure of PLK1, selectivity residues, POLO-like K structure based drug design, ATP-binding; HET: R78 TLA SRT TAR; 1.95A {Homo sapiens} PDB: 2v5q_A 2yac_A* 4a4l_A* 4a4o_A* 3kb7_A* 3d5w_A* 3d5u_A* 3d5v_A 3db8_A* 3dbc_A* 3dbd_A* 3d5x_A* 3db6_A* 3dbe_A* 3dbf_A*

Probab=99.94  E-value=2.3e-26  Score=178.52  Aligned_cols=160  Identities=19%  Similarity=0.266  Sum_probs=125.2

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+++++.++||||+++++++        .++...++++||+.+
T Consensus        28 ~g~Vy~~~~~~~~~~~a~K~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~   99 (294)
T 2rku_A           28 FAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHGFF--------EDNDFVFVVLELCRR   99 (294)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CEEEEEEEECCCCceEEEEEechhhccCHHHHHHHHHHHHHHHhCCCCCEeeeeeee--------ccCCEEEEEEecCCC
Confidence            677887 2    223334444332   234556788999999999999999999986        345678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      +++..+        ...+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..|+
T Consensus       100 ~~L~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~  178 (294)
T 2rku_A          100 RSLLELHKRRKALTEPEARYYL-RQIVLGCQYLHRNRVIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGT  178 (294)
T ss_dssp             CBHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSC
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCChHhEEEcCCCCEEEEeccCceecccCccccccccCC
Confidence            998876        24466667 89999999999998       5565       6999999854           3467


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      ..|  +|||.+.+.. ++.++|+||+|+++|+|++|+.||.+.+..+....+.
T Consensus       179 ~~y--~aPE~~~~~~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~  228 (294)
T 2rku_A          179 PNY--IAPEVLSKKG-HSFEVDVWSIGCIMYTLLVGKPPFETSCLKETYLRIK  228 (294)
T ss_dssp             CSS--CCHHHHTTSC-BCTHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHH
T ss_pred             CCc--CCcchhccCC-CCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHh
Confidence            789  9999997755 8999999999999999999999998877665554443

>2vgo_A Serine/threonine-protein kinase 12-A; nucleotide-binding, serine/threonine-protein kinase, ATP-binding, transferase, coiled coil, cell division, kinase; HET: TPO AD5; 1.7A {Xenopus laevis} PDB: 2bfx_A* 2vgp_A* 3ztx_A* 2vrx_A* 2bfy_A* 4af3_A* 3dj6_A* 3d15_A* 3d2i_A* 3d2k_A* 3d14_A* 3dj5_A* 3dj7_A* 3daj_A* 1ol5_A* 1ol7_A* 2x6d_A* 2x6e_A* 2xng_A* 2dwb_A* ...

Probab=99.94  E-value=1.1e-26  Score=179.53  Aligned_cols=138  Identities=19%  Similarity=0.263  Sum_probs=115.6

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~   99 (188)
                      .+.+.+|++++++++||||+++++++        .++...++++||+.++++..+        ...+..++ .|++.||.
T Consensus        58 ~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~  128 (284)
T 2vgo_A           58 EHQLRREIEIQSHLRHPNILRMYNYF--------HDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATFM-EELADALH  128 (284)
T ss_dssp             HHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEECCCTTEEHHHHHHHHSSCCHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCEeeEEEEE--------EcCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHHH
Confidence            46788999999999999999999986        345678999999999998775        23456666 89999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICEL  156 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el  156 (188)
                      |||+.+       |+||       +||+|||++.         ..|+..|  +|||++.+.. ++.++|+||+|+++|++
T Consensus       129 ~lH~~~i~H~dl~p~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l  205 (284)
T 2vgo_A          129 YCHERKVIHRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRTMCGTLDY--LPPEMIEGKT-HDEKVDLWCAGVLCYEF  205 (284)
T ss_dssp             HHHTTTEECCCCSGGGEEECTTCCEEECCCTTCEECSSSCBCCCCSCGGG--CCHHHHTTCC-BCTTHHHHHHHHHHHHH
T ss_pred             HHHHCCceecCCCHHHEEEcCCCCEEEecccccccCcccccccccCCCCc--CCHHHhccCC-CCcccchhhHHHHHHHH
Confidence            999998       5565       5999999753         4578889  9999998765 89999999999999999


Q ss_pred             HhCCCCCCCCChHHHHHHHHh
Q psy7174         157 LLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       157 ~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ++|..||.+.+..+....+..
T Consensus       206 ~~g~~pf~~~~~~~~~~~~~~  226 (284)
T 2vgo_A          206 LVGMPPFDSPSHTETHRRIVN  226 (284)
T ss_dssp             HHSSCTTCCSSHHHHHHHHHT
T ss_pred             HHCCCCCCCCCHhHHHHHHhc
Confidence            999999988777666555543

>1fvr_A Tyrosine-protein kinase TIE-2; tyrosine kinase, transferase; 2.20A {Homo sapiens} SCOP: d.144.1.7 PDB: 2oo8_X* 2osc_A* 2p4i_A* 3l8p_A* 2wqb_A*

Probab=99.94  E-value=6.3e-27  Score=184.40  Aligned_cols=164  Identities=16%  Similarity=0.164  Sum_probs=123.3

Q ss_pred             cccccc-cCC----c--ccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QSK----W--SPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~~----~--~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..+    .  .++|.++.. .....+.+.+|+++++++ +||||+++++++        .++...+++|||+.
T Consensus        38 ~g~Vy~~~~~~~~~~~~v~iK~~~~~~~~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--------~~~~~~~lv~e~~~  109 (327)
T 1fvr_A           38 FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC--------EHRGYLYLAIEYAP  109 (327)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE--------EETTEEEEEECCCT
T ss_pred             CceEEEEEEccCCcccceeeeeeccccchHHHHHHHHHHHHHHhccCCCchhhhceee--------eeCCceEEEEecCC
Confidence            678887 211    1  134433332 344567789999999999 899999999986        34567899999999


Q ss_pred             cccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc
Q psy7174          76 KTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI  117 (188)
Q Consensus        76 ~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~  117 (188)
                      +++|..+.                        ..+..++ .|++.||.|||+++       |+||       +||+|||+
T Consensus       110 ~~~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~~kL~Dfg~  188 (327)
T 1fvr_A          110 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA-ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  188 (327)
T ss_dssp             TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             CCCHHHHHHhcccccccccccccccccccCCHHHHHHHH-HHHHHHHHHHHhCCccCCCCccceEEEcCCCeEEEcccCc
Confidence            99998753                        2345566 79999999999998       6666       59999998


Q ss_pred             cc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcC
Q psy7174         118 GR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       118 ~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                      +.          ..++..|  +|||++.+.. ++.++||||+||++|+|++ |..||.+.+..+....+.+...
T Consensus       189 ~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~ellt~g~~pf~~~~~~~~~~~~~~~~~  259 (327)
T 1fvr_A          189 SRGQEVYVKKTMGRLPVRW--MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR  259 (327)
T ss_dssp             EESSCEECCC----CCTTT--CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCC
T ss_pred             CccccccccccCCCCCccc--cChhhhcccc-CCchhcchHHHHHHHHHHcCCCCCCCCCcHHHHHHHhhcCCC
Confidence            64          2346679  9999997755 8999999999999999998 9999988877666665554433

>2izr_A Casein kinase I isoform gamma-3; serine/threonine-protein kinase, transferase, ATP- binding, phosphorylation, nucleotide-binding; HET: BRK; 1.3A {Homo sapiens} PDB: 2izs_A* 2izt_A* 2izu_A* 2chl_A* 2c47_A* 2cmw_A*

Probab=99.94  E-value=9.2e-27  Score=183.79  Aligned_cols=150  Identities=11%  Similarity=0.073  Sum_probs=117.9

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .++... .+++|.. .....+.+.+|+++++++ +||||+++++++        ..+...+++|||+ +++|.
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~E~~~l~~l~~h~~i~~~~~~~--------~~~~~~~lv~e~~-~~~L~   92 (330)
T 2izr_A           22 FGELRLGKNLYTNEYVAIKLEPMKSRAPQLHLEYRFYKQLGSGDGIPQVYYFG--------PCGKYNAMVLELL-GPSLE   92 (330)
T ss_dssp             TTSEEEEEETTTTEEEEEEEEETTCSSCCHHHHHHHHHHHCSCTTSCCEEEEE--------EETTEEEEEEECC-CCBHH
T ss_pred             CceEEEEEECCCCcEEEEEEeccccchHHHHHHHHHHHHhhCCCCCCEEEEEE--------ecCCccEEEEEeC-CCCHH
Confidence            678887 322222 3444432 123346789999999999 899999999975        3456789999999 88888


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe------------EEEecCCccc-------------
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL------------KKFVGIGIGR-------------  119 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i------------lkl~dfg~~~-------------  119 (188)
                      .+.         ..+..++ .|++.||.|||+.+       |+||            +||+|||++.             
T Consensus        93 ~~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~iiHrDlkp~Nill~~~~~~~~~~~kl~DFg~a~~~~~~~~~~~~~~  171 (330)
T 2izr_A           93 DLFDLCDRTFSLKTVLMIA-IQLISRMEYVHSKNLIYRDVKPENFLIGRPGNKTQQVIHIIDFALAKEYIDPETKKHIPY  171 (330)
T ss_dssp             HHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTCTTSEEECCCTTCEESBCTTTCCBCCC
T ss_pred             HHHHHcCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeccCCCHHHeeeccCCCCCCceEEEEEcccceeeecCCCCccccc
Confidence            763         3456666 89999999999998       4444            6999999754             


Q ss_pred             -----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 -----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                           ..||..|  +|||++.+.. ++.++|||||||++|||++|+.||.+.+
T Consensus       172 ~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~ell~g~~Pf~~~~  221 (330)
T 2izr_A          172 REHKSLTGTARY--MSINTHLGKE-QSRRDDLEALGHMFMYFLRGSLPWQGLK  221 (330)
T ss_dssp             CCCCCCCSCTTT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             cccCCcCCCccc--cChHHHcCCC-CCchhHHHHHHHHHHHHhcCCCCccccc
Confidence                 3478899  9999998865 8999999999999999999999998743

>3lxl_A Tyrosine-protein kinase JAK3; TYK2, inflammation, cancer, PAN inhibitor, ATP-binding mutation, membrane, nucleotide-binding, phosphoprot SCID; HET: IZA; 1.74A {Homo sapiens} PDB: 3lxk_A* 4hvd_A* 4hvg_A* 4hvh_A* 4hvi_A* 3pjc_A* 1yvj_A*

Probab=99.94  E-value=3.4e-27  Score=185.98  Aligned_cols=139  Identities=18%  Similarity=0.243  Sum_probs=112.2

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLR   87 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~   87 (188)
                      +|.+........+.+.+|++++++++||||+++++++..      .++...++++||+.+++|..+.         ..+.
T Consensus        57 vK~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  130 (327)
T 3lxl_A           57 VKQLQHSGPDQQRDFQREIQILKALHSDFIVKYRGVSYG------PGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLL  130 (327)
T ss_dssp             EEEESSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEC------SSSCEEEEEEECCTTCBHHHHHHHHGGGCCHHHHH
T ss_pred             EEEeccCCHHHHHHHHHHHHHHHhcCCCceeEEEEEEec------CCCceEEEEEeecCCCCHHHHHHhcccCCCHHHHH
Confidence            443333445556778999999999999999999998632      3456789999999999998763         3455


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~  139 (188)
                      .++ .|++.||.|||+.+       |+||       +||+|||++..              .++..|  +|||++.+.. 
T Consensus       131 ~i~-~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-  206 (327)
T 3lxl_A          131 LYS-SQICKGMEYLGSRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFW--YAPESLSDNI-  206 (327)
T ss_dssp             HHH-HHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCGGGCEECCTTCSEEECSSCCCSCGGG--SCHHHHHHCE-
T ss_pred             HHH-HHHHHHHHHHHhCCccCCCCChhhEEECCCCCEEEcccccceecccCCccceeeccCCccccc--cCHHHhccCC-
Confidence            666 79999999999998       6676       59999998642              345569  9999998765 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      ++.++||||+||++|+|++|..||.+
T Consensus       207 ~~~~~Di~slG~il~~ll~g~~p~~~  232 (327)
T 3lxl_A          207 FSRQSDVWSFGVVLYELFTYCDKSCS  232 (327)
T ss_dssp             EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             CChHHhHHHHHHHHHHHHhCCCCCcc
Confidence            89999999999999999999999854

>2clq_A Mitogen-activated protein kinase kinase kinase 5; transferase, metal-binding, apoptosis; HET: STU; 2.3A {Homo sapiens}

Probab=99.94  E-value=8.5e-27  Score=180.65  Aligned_cols=151  Identities=22%  Similarity=0.285  Sum_probs=116.9

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+........+.+.+|+++++.++||||+++++++        ..+...++++||+.+++|
T Consensus        35 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~lv~e~~~~~~L  106 (295)
T 2clq_A           35 YGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSF--------SENGFIKIFMEQVPGGSL  106 (295)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEECCCC---HHHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCSEEEH
T ss_pred             cEEEEEEEECCCCeEEEEEEccCCchHHHHHHHHHHHHHHhCCCCCEeeEeeEE--------EeCCcEEEEEEeCCCCCH
Confidence            678887 2    223335544444445567789999999999999999999986        345678999999999999


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc-----------ccc
Q psy7174          80 ARFY-----------SHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        80 ~~~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~-----------~~~  122 (188)
                      ..+.           ..+..++ .|++.||.|||+.+       |+|+        +||+|||++.           ..|
T Consensus       107 ~~~l~~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~  185 (295)
T 2clq_A          107 SALLRSKWGPLKDNEQTIGFYT-KQILEGLKYLHDNQIVHRDIKGDNVLINTYSGVLKISDFGTSKRLAGINPCTETFTG  185 (295)
T ss_dssp             HHHHHHTTCCCTTCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEETTTCCEEECCTTTCEESCC-----CCCCC
T ss_pred             HHHHHhhccCCCccHHHHHHHH-HHHHHHHHHHHhCCEEccCCChhhEEEECCCCCEEEeecccccccCCCCCcccccCC
Confidence            8763           3355566 79999999999998       4444        6999999754           346


Q ss_pred             cccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      +..|  +|||++.+. ..++.++|+||||+++|+|++|+.||.+.
T Consensus       186 ~~~y--~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  228 (295)
T 2clq_A          186 TLQY--MAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL  228 (295)
T ss_dssp             CGGG--CCHHHHHHGGGGCSHHHHHHHHHHHHHHHHHTSCTTGGG
T ss_pred             Cccc--cChhhhcCCCCCCCcHHHHHHHHHHHHHHHHCCCCccCC
Confidence            7889  999998653 23789999999999999999999999654

>3brb_A Proto-oncogene tyrosine-protein kinase MER; ATP-binding, disease mutation, glycoprotein, nucleot binding, phosphorylation, receptor; HET: ADP; 1.90A {Homo sapiens} PDB: 3bpr_A* 2p0c_A*

Probab=99.94  E-value=2e-26  Score=180.32  Aligned_cols=152  Identities=14%  Similarity=0.172  Sum_probs=116.0

Q ss_pred             hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------HHHHHHH
Q psy7174          25 VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------SHLRYLE   90 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------~~~~~~~   90 (188)
                      ....+.+.+|++++++++||||+++++++...   ........++++||+.++++..+.              ..+..++
T Consensus        77 ~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~---~~~~~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~i~  153 (313)
T 3brb_A           77 QREIEEFLSEAACMKDFSHPNVIRLLGVCIEM---SSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFM  153 (313)
T ss_dssp             HHHHHHHHHHHHHHHTCCCTTBCCCCEEEEC----------CEEEEEECCTTCBHHHHHHHTTBTTSCCCCCHHHHHHHH
T ss_pred             hhHHHHHHHHHHHHhcCCCCCeeeeeEEEeec---cccCCcccEEEEecccCCCHHHHHHHhhhhcCCccCCHHHHHHHH
Confidence            34456789999999999999999999986331   111223569999999999998763              4566677


Q ss_pred             HHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCccccccCCCCch
Q psy7174          91 NQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLFGARMYGVG  143 (188)
Q Consensus        91 ~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~~~~~~~~~  143 (188)
                       .|++.||.|||+++       |+||       +||+|||++..             .++..|  +|||.+.+.. ++.+
T Consensus       154 -~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~  229 (313)
T 3brb_A          154 -VDIALGMEYLSNRNFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKW--IAIESLADRV-YTSK  229 (313)
T ss_dssp             -HHHHHHHHHHHTTTCCCCCCSGGGEEECTTSCEEECSCSCC----------------CCGGG--SCHHHHHSSC-CCHH
T ss_pred             -HHHHHHHHHHHhCCcccCCCCcceEEEcCCCcEEEeecCcceecccccccCcccccCCCccc--cCchhhcCCC-ccch
Confidence             89999999999998       6666       59999998642             245578  9999998765 9999


Q ss_pred             hHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         144 IDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       144 ~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      +||||||+++|+|++ |.+||.+.+.......+......+.
T Consensus       230 ~Di~slG~il~el~~~g~~p~~~~~~~~~~~~~~~~~~~~~  270 (313)
T 3brb_A          230 SDVWAFGVTMWEIATRGMTPYPGVQNHEMYDYLLHGHRLKQ  270 (313)
T ss_dssp             HHHHHHHHHHHHHHTTSCCSSTTCCGGGHHHHHHTTCCCCC
T ss_pred             hhhHHHHHHHHHHHhcCCCCCccCCHHHHHHHHHcCCCCCC
Confidence            999999999999999 9999988776666555554443333

>3com_A Serine/threonine-protein kinase 4; MST1, STE20-like kinase, PSI, structural genomics, protein structure initiative; HET: TPO; 2.20A {Homo sapiens}

Probab=99.94  E-value=1.7e-26  Score=180.72  Aligned_cols=155  Identities=15%  Similarity=0.195  Sum_probs=120.6

Q ss_pred             cccccc-cCCc-ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ ..+. ...+++|.. .....+.+.+|++++++++||||+++++++        ..+...++++||+.+++|..
T Consensus        42 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~  113 (314)
T 3com_A           42 YGSVYKAIHKETGQIVAIKQVPVESDLQEIIKEISIMQQCDSPHVVKYYGSY--------FKNTDLWIVMEYCGAGSVSD  113 (314)
T ss_dssp             -CEEEEEEETTTCCEEEEEEEETTSCCHHHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCTTEEHHH
T ss_pred             CeEEEEEEECCCCCEEEEEecCchHHHHHHHHHHHHHHhCCCCCCccEEEEE--------EeCCEEEEEeecCCCCCHHH
Confidence            677777 2221 123444443 233457789999999999999999999986        34567899999999999987


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          82 FY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        82 ~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      +.         ..+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..++..| 
T Consensus       114 ~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~y-  191 (314)
T 3com_A          114 IIRLRNKTLTEDEIATIL-QSTLKGLEYLHFMRKIHRDIKAGNILLNTEGHAKLADFGVAGQLTDTMAKRNTVIGTPFW-  191 (314)
T ss_dssp             HHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECBTTBSCBCCCCSCGGG-
T ss_pred             HHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCCcCCCcCHHHEEECCCCCEEEeecccchhhhhhccccCccCCCCCc-
Confidence            63         3456666 89999999999988       5566       5999999753           3467789 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                       +|||.+.+.. ++.++||||+|+++|+|++|+.||.+.+....
T Consensus       192 -~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~  233 (314)
T 3com_A          192 -MAPEVIQEIG-YNCVADIWSLGITAIEMAEGKPPYADIHPMRA  233 (314)
T ss_dssp             -CCHHHHSSSC-BCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHH
T ss_pred             -cChhhcCCCC-CCccccHHHHHHHHHHHHhCCCCCCCCChHHH
Confidence             9999998765 89999999999999999999999987665443

>1t4h_A Serine/threonine-protein kinase WNK1; protein serine/threonine kinase, transferase; 1.80A {Rattus norvegicus} PDB: 3fpq_A

Probab=99.94  E-value=3.5e-26  Score=177.10  Aligned_cols=156  Identities=19%  Similarity=0.188  Sum_probs=119.6

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|++++++++||||+++++++...    ..++...++++||+.++
T Consensus        39 ~g~Vy~~~~~~~~~~va~k~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~~~~----~~~~~~~~lv~e~~~~~  114 (290)
T 1t4h_A           39 FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST----VKGKKCIVLVTELMTSG  114 (290)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE----SSSCEEEEEEEECCCSC
T ss_pred             CeEEEEeEecCCceEEEEEEecchhhCHHHHHHHHHHHHHHHhCCCCCeeeeeeeeccc----cCCCceEEEEEEecCCC
Confidence            677887 2    222233333322  344567789999999999999999999986331    12356689999999999


Q ss_pred             cHHHHH--------HHHHHHHHHHHHHHHHHHhhcC---------CCCe--------EEEecCCccc---------cccc
Q psy7174          78 TKARFY--------SHLRYLENQQILEGLQALKSSM---------PALL--------KKFVGIGIGR---------HVCT  123 (188)
Q Consensus        78 ~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~---------~~~i--------lkl~dfg~~~---------~~~~  123 (188)
                      +|..+.        ..+..++ .|++.||.|||+.+         |+||        +||+|||++.         ..|+
T Consensus       115 ~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~~~i~H~dikp~Nil~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t  193 (290)
T 1t4h_A          115 TLKTYLKRFKVMKIKVLRSWC-RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGT  193 (290)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSS
T ss_pred             CHHHHHHHccCCCHHHHHHHH-HHHHHHHHHHHcCCCCEEECCCCHHHEEEECCCCCEEEeeCCCcccccccccccccCC
Confidence            998863        3455666 79999999999975         4444        6999999864         4578


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                      ..|  +|||++.+ . ++.++|+||+||++|+|++|+.||.+....
T Consensus       194 ~~y--~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~pf~~~~~~  235 (290)
T 1t4h_A          194 PEF--MAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNA  235 (290)
T ss_dssp             CCC--CCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSH
T ss_pred             cCc--CCHHHHhc-c-CCCcchHHHHHHHHHHHHhCCCCCCCcCcH
Confidence            899  99998864 3 899999999999999999999999875443

>2h6d_A 5'-AMP-activated protein kinase catalytic subunit alpha-2; ATP-binding, cholesterol biosynthesis, fatty acid biosynthesis;kinase, lipid synthesis; 1.85A {Homo sapiens} PDB: 3aqv_A* 2yza_A*

Probab=99.94  E-value=3.8e-26  Score=175.51  Aligned_cols=162  Identities=19%  Similarity=0.230  Sum_probs=120.0

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||. .    ++..++|.+.+.   ..+..+.+.+|+++++.++||||+++++++        .++...++++|++.+
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~   95 (276)
T 2h6d_A           24 FGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKREIQNLKLFRHPHIIKLYQVI--------STPTDFFMVMEYVSG   95 (276)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEEECCCS
T ss_pred             CeEEEEEEECCCCceEEEEEeccccccchhHHHHHHHHHHHHhcCCCCCEeEEEEEE--------ecCCeEEEEEeccCC
Confidence            677886 2    223334444332   223456788999999999999999999986        345678999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~  124 (188)
                      ++|..+.        ..+..++ .|++.||.|||+++       |+|+       +|++|||++.          ..++.
T Consensus        96 ~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~~l~dfg~~~~~~~~~~~~~~~~~~  174 (276)
T 2h6d_A           96 GELFDYICKHGRVEEMEARRLF-QQILSAVDYCHRHMVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSP  174 (276)
T ss_dssp             CBHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHHCSSCCCCCGGGEEECTTSCEEECCCCGGGCCCC-----------
T ss_pred             CcHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCCccCCCChhhEEECCCCCEEEeecccccccCCCcceecccCCc
Confidence            9998752        3456666 89999999999998       5555       5999999754          34677


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      .|  +|||.+.+....+.++|+||+|+++|+|++|+.||.+.+.......+..
T Consensus       175 ~y--~aPE~~~~~~~~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~  225 (276)
T 2h6d_A          175 NY--AAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPFDDEHVPTLFKKIRG  225 (276)
T ss_dssp             ----CCTGGGTTSCCCHHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             cc--cCHHHHcCCCCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhhc
Confidence            89  9999998755346899999999999999999999988776555555443

>2wqm_A Serine/threonine-protein kinase NEK7; ATP-binding, polymorphism, metal-binding, cell cycle kinase, mitosis, cytoplasm, magnesium, transferase; 2.10A {Homo sapiens} PDB: 2wqn_A*

Probab=99.94  E-value=2.1e-26  Score=179.95  Aligned_cols=150  Identities=20%  Similarity=0.308  Sum_probs=113.4

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...   .....+.+.+|++++++++||||+++++++        ..+...++++|++.+
T Consensus        45 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~  116 (310)
T 2wqm_A           45 FSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYASF--------IEDNELNIVLELADA  116 (310)
T ss_dssp             -CEEEEEEETTTCCEEEEEEECTTSSCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCCS
T ss_pred             CceEEEEEEcCCCceEEEEeeehhhccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE--------EcCCcEEEEEecCCC
Confidence            678887 2    333344444431   344567789999999999999999999986        345678999999999


Q ss_pred             ccHHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------
Q psy7174          77 TTKARFY------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------  119 (188)
Q Consensus        77 ~~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------  119 (188)
                      ++|..+.            ..+..++ .|++.||.|||+.+       |+||       +||+|||++.           
T Consensus       117 ~~L~~~l~~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~i~H~dl~p~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~  195 (310)
T 2wqm_A          117 GDLSRMIKHFKKQKRLIPERTVWKYF-VQLCSALEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHS  195 (310)
T ss_dssp             CBHHHHHHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCC---------------
T ss_pred             CCHHHHHHHhcccccCCCHHHHHHHH-HHHHHHHHHHhhCCeeCCCCcHHHEEEcCCCCEEEEeccceeeecCCCccccc
Confidence            9998753            2345566 79999999999998       5555       6999999753           


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ..++..|  +|||++.+.. ++.++|+||||+++|+|++|..||.+.
T Consensus       196 ~~~~~~y--~aPE~~~~~~-~~~~~Dv~slG~il~~l~~g~~p~~~~  239 (310)
T 2wqm_A          196 LVGTPYY--MSPERIHENG-YNFKSDIWSLGCLLYEMAALQSPFYGD  239 (310)
T ss_dssp             ---CCSS--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTC--
T ss_pred             cCCCeeE--eChHHhCCCC-CCchhhHHHHHHHHHHHHhCCCCCccc
Confidence            3467889  9999998765 899999999999999999999999754

>2y7j_A Phosphorylase B kinase gamma catalytic chain, testis/liver isoform; transferase; HET: B49; 2.50A {Homo sapiens} PDB: 1h0t_A 1lp1_B 1q2n_A 2spz_A 3mzw_B* 1ss1_A 2jwd_A 1bdc_A 1bdd_A 1fc2_C* 2b87_A 2b88_A 1h0t_B 1lp1_A 2b87_B 2b89_A 3s1k_A

Probab=99.94  E-value=1.1e-26  Score=186.16  Aligned_cols=139  Identities=22%  Similarity=0.313  Sum_probs=114.0

Q ss_pred             hhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|+++++++ +||||+++++++        ......+++|||+.++++..+.        ..+..++ .|++.||
T Consensus       143 ~~~~~~E~~~l~~l~~hp~iv~~~~~~--------~~~~~~~lv~e~~~g~~L~~~l~~~~~l~~~~~~~i~-~qi~~~L  213 (365)
T 2y7j_A          143 REATRRETHILRQVAGHPHIITLIDSY--------ESSSFMFLVFDLMRKGELFDYLTEKVALSEKETRSIM-RSLLEAV  213 (365)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEE--------EBSSEEEEEECCCTTCBHHHHHHHHSSCCHHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeEEEEEE--------eeCCEEEEEEEeCCCCcHHHHHHhcCCCCHHHHHHHH-HHHHHHH
Confidence            45678999999999 799999999986        3456789999999999998763        3466677 8999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCcccccc-----CCCCchhHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFGA-----RMYGVGIDMWAV  149 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~~-----~~~~~~~Diwsl  149 (188)
                      .|||+.+       |+||       +|++|||++.          ..||+.|  +|||++.+.     ..++.++|||||
T Consensus       214 ~~LH~~gi~H~Dlkp~NIl~~~~~~ikl~DfG~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~~~~Di~sl  291 (365)
T 2y7j_A          214 SFLHANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGY--LAPEILKCSMDETHPGYGKEVDLWAC  291 (365)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGG--CCHHHHHHTTCTTSCCBCTTHHHHHH
T ss_pred             HHHHhCCeecCCCCHHHEEECCCCCEEEEecCcccccCCCcccccCCCCCCc--cChhhccccccccCcCCCchhhHHhH
Confidence            9999998       6666       5999999753          4578899  999998632     237889999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ||++|+|++|..||.+.+....+..+..
T Consensus       292 G~il~ell~g~~pf~~~~~~~~~~~i~~  319 (365)
T 2y7j_A          292 GVILFTLLAGSPPFWHRRQILMLRMIME  319 (365)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCHHHHHHHHHh
Confidence            9999999999999988776655555443

>2h34_A Serine/threonine-protein kinase PKNE; apoenzyme, transferase; 2.80A {Mycobacterium tuberculosis}

Probab=99.94  E-value=2.1e-26  Score=180.34  Aligned_cols=153  Identities=20%  Similarity=0.268  Sum_probs=116.3

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|++++++++||||+++++++        ..+...++++|++.+
T Consensus        47 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~~  118 (309)
T 2h34_A           47 MGDVYEAEDTVRERIVALKLMSETLSSDPVFRTRMQREARTAGRLQEPHVVPIHDFG--------EIDGQLYVDMRLING  118 (309)
T ss_dssp             SSEEEEEEETTTTEEEEEEECGGGGGGSHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------EETTEEEEEEECCCC
T ss_pred             CeeEEEEEEcCCCeEEEEEecCcccccCHHHHHHHHHHHHHHhhcCCCCeeEEEEEE--------eeCCeEEEEEEecCC
Confidence            678887 2    222334444332   223346788999999999999999999986        345678999999999


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVC  122 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~  122 (188)
                      ++|..+.        ..+..++ .|++.||.|||+.+       |+||       +||+|||++.            ..+
T Consensus       119 ~~L~~~l~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~  197 (309)
T 2h34_A          119 VDLAAMLRRQGPLAPPRAVAIV-RQIGSALDAAHAAGATHRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVG  197 (309)
T ss_dssp             EEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSCCC----------------C
T ss_pred             CCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCcCCcCCCChHHEEEcCCCCEEEecCccCccccccccccccccCC
Confidence            9998863        3456666 89999999999998       5565       5999999743            356


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChH
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDL  169 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~  169 (188)
                      +..|  +|||.+.+.. ++.++|+||||+++|++++|+.||.+.+..
T Consensus       198 ~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~~  241 (309)
T 2h34_A          198 TLYY--MAPERFSESH-ATYRADIYALTCVLYECLTGSPPYQGDQLS  241 (309)
T ss_dssp             CGGG--CCGGGTCC-----CCCHHHHHHHHHHHHHHSSCSSCSCHHH
T ss_pred             CcCc--cCHHHHcCCC-CCchHhHHHHHHHHHHHHHCCCCCCCchHH
Confidence            7889  9999998755 899999999999999999999999876654

>2wei_A Calmodulin-domain protein kinase 1, putative; nucleotide-binding, serine/threonine-protein kinase, CGD3_920, transferase; HET: VGG; 1.65A {Cryptosporidium parvum iowa II} PDB: 3dfa_A 3ma6_A*

Probab=99.94  E-value=2.8e-26  Score=177.52  Aligned_cols=161  Identities=22%  Similarity=0.317  Sum_probs=126.0

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|++++++++||||+++++++        .+....++++|++.++
T Consensus        35 ~g~V~~~~~~~~~~~valK~~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~  106 (287)
T 2wei_A           35 FGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEIL--------EDSSSFYIVGELYTGG  106 (287)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGBSSSCHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEECCCCSC
T ss_pred             CEEEEEEEEcCCCcEEEEEEecccccchHHHHHHHHHHHHHHhccCCCccEEEEEE--------eCCCeEEEEEEccCCC
Confidence            677887 2    223334444332  234567789999999999999999999986        3456789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVC  122 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~  122 (188)
                      ++...        ...+..++ .|++.||.|||+.+       |+||          +||+|||++.          ..+
T Consensus       107 ~L~~~l~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~i~H~dl~p~NIlv~~~~~~~~~kL~Dfg~~~~~~~~~~~~~~~~  185 (287)
T 2wei_A          107 ELFDEIIKRKRFSEHDAARII-KQVFSGITYMHKHNIVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIG  185 (287)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEESCSSTTCCEEECSTTGGGTBCCCSSCSCHHH
T ss_pred             CHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeccCCChhhEEEecCCCcccEEEeccCcceeecCCCccccccC
Confidence            98764        34566677 89999999999998       4444          6899999754          235


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +..|  +|||.+.+ . ++.++|+||+|+++|++++|..||.+.+..+....+...
T Consensus       186 ~~~y--~aPE~~~~-~-~~~~~Di~slG~~l~~l~~g~~p~~~~~~~~~~~~~~~~  237 (287)
T 2wei_A          186 TAYY--IAPEVLRG-T-YDEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETG  237 (287)
T ss_dssp             HHTT--CCHHHHTT-C-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             cccc--cChHHhcC-C-CCCchhhHhHHHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            6789  99999865 3 899999999999999999999999988877766666544

>3q4u_A Activin receptor type-1; structural genomics consortium, SGC, protein kinase, transfe; HET: LDN FLC; 1.82A {Homo sapiens} PDB: 3mtf_A* 3oom_A* 4dym_A* 3h9r_A* 3my0_A*

Probab=99.94  E-value=7e-27  Score=181.61  Aligned_cols=154  Identities=16%  Similarity=0.159  Sum_probs=115.3

Q ss_pred             cccccccCCccccccccccchhhhhHHHHHHHHHHh--CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRR--LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~~~~~~~~~~~E~~il~~--l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+.......+|+|....+..+.+.+|.+++..  ++||||+++++++...    .......++++||+.+|+|..+
T Consensus        21 ~g~V~~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~niv~~~~~~~~~----~~~~~~~~lv~e~~~~g~L~~~   96 (301)
T 3q4u_A           21 YGEVWRGSWQGENVAVKIFSSRDEKSWFRETELYNTVMLRHENILGFIASDMTS----RHSSTQLWLITHYHEMGSLYDY   96 (301)
T ss_dssp             SEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHTCCCCTTBCCEEEEEEEE----ETTEEEEEEEECCCTTCBHHHH
T ss_pred             CcEEEEEEECCEEEEEEEeccccchhhHHHHHHHHHhhccCcCeeeEEEeeccc----cCCCceeEEehhhccCCCHHHH
Confidence            677777211111345555444556677788888777  7899999999986432    1334567999999999999886


Q ss_pred             -------HHHHHHHHHHHHHHHHHHHh--------hcC-------CCCe-------EEEecCCccc--------------
Q psy7174          83 -------YSHLRYLENQQILEGLQALK--------SSM-------PALL-------KKFVGIGIGR--------------  119 (188)
Q Consensus        83 -------~~~~~~~~~~qi~~gl~~lH--------~~~-------~~~i-------lkl~dfg~~~--------------  119 (188)
                             ...+..++ .|++.||.|||        +.+       |+|+       +||+|||++.              
T Consensus        97 l~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~  175 (301)
T 3q4u_A           97 LQLTTLDTVSCLRIV-LSIASGLAHLHIEIFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNN  175 (301)
T ss_dssp             HTTCCBCHHHHHHHH-HHHHHHHHHHHSCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEEECCCC
T ss_pred             HhhcccCHHHHHHHH-HHHHHHHHHHHHhhhhccCCCCeecCCCChHhEEEcCCCCEEEeeCCCeeeccccccccccccc
Confidence                   34556666 79999999999        655       6666       5999999753              


Q ss_pred             -ccccccccCCCCccccccC-----CCCchhHHHHHHHHHHHHHhC----------CCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGAR-----MYGVGIDMWAVGCIICELLLK----------APFLPG  165 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~-----~~~~~~DiwslG~il~el~~g----------~~pf~~  165 (188)
                       ..||..|  +|||++.+..     .++.++||||+||++|||++|          .+||.+
T Consensus       176 ~~~gt~~y--~aPE~~~~~~~~~~~~~~~~~DvwslG~il~el~tg~~~~~~~~~~~~pf~~  235 (301)
T 3q4u_A          176 PRVGTKRY--MAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEVARRMVSNGIVEDYKPPFYD  235 (301)
T ss_dssp             CCCCCGGG--CCHHHHTTCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             ccccccce--eChhhhcCcCCCCcccCCchhhHHHHHHHHHHHHhhhcCccccccccccccc
Confidence             2678899  9999997652     145799999999999999999          888854

>1t46_A HOMO sapiens V-KIT hardy-zuckerman 4 feline sarcoma viral oncogene homolog; kinase, structure, inhibitor, STI-571, gleevec, transferase activator; HET: STI; 1.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1pkg_A* 1t45_A 3g0e_A* 3g0f_A*

Probab=99.94  E-value=3.8e-26  Score=178.37  Aligned_cols=136  Identities=20%  Similarity=0.256  Sum_probs=111.1

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ...+.+.+|+++++++ +||||+++++++        .++...++++||+.+++|..+..                    
T Consensus        68 ~~~~~~~~E~~~l~~l~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~~  139 (313)
T 1t46_A           68 TEREALMSELKVLSYLGNHMNIVNLLGAC--------TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDE  139 (313)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTEEHHHHHHHTTTTC--------------
T ss_pred             HHHHHHHHHHHHHhhcccCCCeeeEEEEE--------ecCCCcEEEEecCCCCCHHHHHHhccccccccccccccccccc
Confidence            4557789999999999 899999999986        44567899999999999987532                    


Q ss_pred             ------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCC
Q psy7174          85 ------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAP  131 (188)
Q Consensus        85 ------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aP  131 (188)
                            .+..++ .|++.||.|||+++       |+|+       +||+|||++..             .++..|  +||
T Consensus       140 ~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aP  216 (313)
T 1t46_A          140 LALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW--MAP  216 (313)
T ss_dssp             CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGG--CCH
T ss_pred             ccCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCccceEEEcCCCCEEEccccccccccccccceeccCCCCccee--eCh
Confidence                  345566 79999999999998       5666       59999998642             234569  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHH
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLT  173 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~  173 (188)
                      |.+.+.. ++.++||||+|+++|+|++ |..||.+.+......
T Consensus       217 E~~~~~~-~~~~~Di~slG~il~ellt~g~~p~~~~~~~~~~~  258 (313)
T 1t46_A          217 ESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFY  258 (313)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHH
T ss_pred             HHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCCCcccchhHHH
Confidence            9997765 9999999999999999998 999998766444333

>1phk_A Phosphorylase kinase; glycogen metabolism, transferase, serine/threonine-protein, ATP-binding, calmodulin-binding; HET: ATP; 2.20A {Oryctolagus cuniculus} SCOP: d.144.1.7 PDB: 1ql6_A* 2phk_A*

Probab=99.94  E-value=4.5e-26  Score=176.95  Aligned_cols=141  Identities=23%  Similarity=0.266  Sum_probs=115.7

Q ss_pred             hhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------HHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------SHLRYLENQQILEGL   98 (188)
Q Consensus        28 ~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------~~~~~~~~~qi~~gl   98 (188)
                      .+.+.+|+++++++. ||||+++++++        ..+...++++||+.+++|..+.        ..+..++ .|++.||
T Consensus        67 ~~~~~~e~~~l~~l~~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l  137 (298)
T 1phk_A           67 REATLKEVDILRKVSGHPNIIQLKDTY--------ETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIM-RALLEVI  137 (298)
T ss_dssp             HHHHHHHHHHHHHHTTCTTBCCEEEEE--------ECSSEEEEEEECCTTCBHHHHHHHHSSCCHHHHHHHH-HHHHHHH
T ss_pred             HHHHHHHHHHHHHhcCCCCEeeeeeee--------ccCCeEEEEEeccCCCcHHHHHhccCCCCHHHHHHHH-HHHHHHH
Confidence            456789999999996 99999999986        4466789999999999998762        3456666 8999999


Q ss_pred             HHHhhcC-------CCCe-------EEEecCCccc----------ccccccccCCCCccccc-----cCCCCchhHHHHH
Q psy7174          99 QALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTRGAPELLFG-----ARMYGVGIDMWAV  149 (188)
Q Consensus        99 ~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~-----~~~~~~~~Diwsl  149 (188)
                      .|||+.+       |+||       +||+|||++.          ..++..|  +|||++.+     ...++.++|+||+
T Consensus       138 ~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~~~~~Di~sl  215 (298)
T 1phk_A          138 CALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKLREVCGTPSY--LAPEIIECSMNDNHPGYGKEVDMWST  215 (298)
T ss_dssp             HHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCBCCCCSCGGG--CCHHHHHHHHCTTSCCBCTHHHHHHH
T ss_pred             HHHHHCCcccCCCCcceEEEcCCCcEEEecccchhhcCCCcccccccCCccc--cCHHHhccccccccccCCcccccHhH
Confidence            9999998       5566       5999999754          3567889  99999852     2347899999999


Q ss_pred             HHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         150 GCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       150 G~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                      |+++|+|++|..||.+.+.......+....
T Consensus       216 G~~l~~l~~g~~p~~~~~~~~~~~~~~~~~  245 (298)
T 1phk_A          216 GVIMYTLLAGSPPFWHRKQMLMLRMIMSGN  245 (298)
T ss_dssp             HHHHHHHHHSSCSSCCSSHHHHHHHHHHTC
T ss_pred             HHHHHHHHHCCCCCcCccHHHHHHHHhcCC
Confidence            999999999999998887777666665543

>2i1m_A Macrophage colony-stimulating factor 1 receptor; kinase domain, kinase inhibitor complex, transferase; HET: 5CN; 1.80A {Homo sapiens} PDB: 3bea_A* 3lcd_A* 2i0y_A* 2i0v_A* 3dpk_A* 3krj_A* 3krl_A* 2ogv_A 3lco_A*

Probab=99.94  E-value=3.1e-26  Score=180.64  Aligned_cols=138  Identities=20%  Similarity=0.262  Sum_probs=112.0

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH--------------------
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS--------------------   84 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~--------------------   84 (188)
                      ...+.+.+|+++++++ +||||+++++++        .++...+++|||+.+|+|..+..                    
T Consensus        91 ~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~  162 (333)
T 2i1m_A           91 DEKEALMSELKIMSHLGQHENIVNLLGAC--------THGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTAS  162 (333)
T ss_dssp             HHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTEEHHHHHHHHHHHHSCC-------CCCC
T ss_pred             HHHHHHHHHHHHHHhhcCCCCeeeEEEEE--------ecCCceEEEEecCCCCcHHHHHHHhcccccccccccccccccC
Confidence            4557789999999999 899999999986        44567899999999999987632                    


Q ss_pred             --HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-------------cccccccCCCCcccc
Q psy7174          85 --HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-------------VCTLYCTRGAPELLF  135 (188)
Q Consensus        85 --~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-------------~~~~~y~~~aPe~~~  135 (188)
                        .+..++ .|++.||.|||+.+       |+||       +||+|||++..             .++..|  +|||++.
T Consensus       163 ~~~~~~~~-~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~  239 (333)
T 2i1m_A          163 TRDLLHFS-SQVAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVKW--MAPESIF  239 (333)
T ss_dssp             HHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGCEEEGGGEEEBCCCGGGCCGGGCTTSEECSSCEECGGG--SCHHHHH
T ss_pred             HHHHHHHH-HHHHHHHHHHhcCCcccCCcccceEEECCCCeEEECccccccccccccceeecCCCCCCccc--cCHHHhc
Confidence              234455 79999999999998       6666       59999998652             235579  9999998


Q ss_pred             ccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         136 GARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       136 ~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      +.. ++.++|||||||++|+|++ |.+||.+.........+
T Consensus       240 ~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  279 (333)
T 2i1m_A          240 DCV-YTVQSDVWSYGILLWEIFSLGLNPYPGILVNSKFYKL  279 (333)
T ss_dssp             HCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCSSHHHHHH
T ss_pred             cCC-CChHHHHHHHHHHHHHHHcCCCCCCcccchhHHHHHH
Confidence            755 8999999999999999998 99999876554443333

>2ycf_A Serine/threonine-protein kinase CHK2; transferase, anticancer, anticancer drug design; HET: YCF; 1.77A {Homo sapiens} PDB: 2yiq_A* 2w7x_A* 2ycq_A* 2ycs_A* 2w0j_A* 2yir_A* 2yit_A* 2wtj_A* 2cn8_A* 2wtc_A* 2wtd_A* 2wti_A* 2cn5_A* 2xbj_A* 2xm8_A* 2xm9_A* 2xk9_A* 2ycr_A*

Probab=99.94  E-value=3e-26  Score=180.16  Aligned_cols=127  Identities=20%  Similarity=0.244  Sum_probs=104.2

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~   99 (188)
                      ...+.+|++++++++||||+++++++         .....++++||+.++++...        +..+..++ .|++.||.
T Consensus        59 ~~~~~~E~~~l~~l~h~~i~~~~~~~---------~~~~~~lv~e~~~~~~L~~~~~~~~~~~~~~~~~~~-~qi~~~l~  128 (322)
T 2ycf_A           59 ALNVETEIEILKKLNHPCIIKIKNFF---------DAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYF-YQMLLAVQ  128 (322)
T ss_dssp             --CHHHHHHHHHHCCCTTBCCEEEEE---------ESSSEEEEEECCTTEETHHHHSTTCCCCHHHHHHHH-HHHHHHHH
T ss_pred             hhhHHHHHHHHHhCCCCCCceEeeEE---------cCCceEEEEecCCCCcHHHHHhccCCCCHHHHHHHH-HHHHHHHH
Confidence            34578999999999999999999985         12347999999999998775        34566677 89999999


Q ss_pred             HHhhcC-------CCCe----------EEEecCCccc----------ccccccccCCCCccccc--cCCCCchhHHHHHH
Q psy7174         100 ALKSSM-------PALL----------KKFVGIGIGR----------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVG  150 (188)
Q Consensus       100 ~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG  150 (188)
                      |||+++       |+||          +||+|||++.          ..||..|  +|||++..  ...++.++||||||
T Consensus       129 ~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~Di~slG  206 (322)
T 2ycf_A          129 YLHENGIIHRDLKPENVLLSSQEEDCLIKITDFGHSKILGETSLMRTLCGTPTY--LAPEVLVSVGTAGYNRAVDCWSLG  206 (322)
T ss_dssp             HHHHTTEECCCCSGGGEEESSSSSSCCEEECCCTTCEECCCCHHHHHHHSCCTT--CCHHHHHHTTTTTCTTHHHHHHHH
T ss_pred             HHHHCCeeccCCCHHHEEEecCCCCCeEEEccCccceecccccccccccCCcCc--cCchhhccCCCCCCCchhhHHHHH
Confidence            999998       4444          6999999864          3478899  99999742  23488999999999


Q ss_pred             HHHHHHHhCCCCCCCC
Q psy7174         151 CIICELLLKAPFLPGE  166 (188)
Q Consensus       151 ~il~el~~g~~pf~~~  166 (188)
                      |++|+|++|..||.+.
T Consensus       207 ~il~~l~~g~~pf~~~  222 (322)
T 2ycf_A          207 VILFICLSGYPPFSEH  222 (322)
T ss_dssp             HHHHHHHHSSCSSCST
T ss_pred             HHHHHHHhCCCCCccc
Confidence            9999999999999754

>1x8b_A WEE1HU, WEE1-like protein kinase; cell cycle, transferase; HET: 824; 1.81A {Homo sapiens} PDB: 3bi6_A* 3biz_A* 3cqe_A* 3cr0_A* 2in6_A* 2io6_A* 2z2w_A*

Probab=99.94  E-value=2.5e-26  Score=176.93  Aligned_cols=150  Identities=16%  Similarity=0.047  Sum_probs=117.1

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+++.  .......+.+|+..+..+ +||||+++++++        .++...++++||+.+
T Consensus        24 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~~e~~~~~~l~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~   95 (289)
T 1x8b_A           24 FGSVFKCVKRLDGCIYAIKRSKKPLAGSVDEQNALREVYAHAVLGQHSHVVRYFSAW--------AEDDHMLIQNEYCNG   95 (289)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCCTTSHHHHHHHHHHHHHHHSCSCTTBCCEEEEE--------EETTEEEEEEECCTT
T ss_pred             ceEEEEEEEcCCCceEEEEEecccccccHHHHHHHHHHHHHHHhCCCCCeeeeeeee--------ecCCeEEEEEEecCC
Confidence            677887     2333445544442  334556788999999999 899999999986        345678999999999


Q ss_pred             ccHHHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------------------------EE
Q psy7174          77 TTKARFY------------SHLRYLENQQILEGLQALKSSM-------PALL--------------------------KK  111 (188)
Q Consensus        77 ~~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------------------------lk  111 (188)
                      ++|..+.            ..+..++ .|++.||.|||+++       |+||                          +|
T Consensus        96 ~~L~~~l~~~~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~ivH~Dikp~NIl~~~~~~~~~~~~~~~~~~~~~~~~~~k  174 (289)
T 1x8b_A           96 GSLADAISENYRIMSYFKEAELKDLL-LQVGRGLRYIHSMSLVHMDIKPSNIFISRTSIPNAASEEGDEDDWASNKVMFK  174 (289)
T ss_dssp             CBHHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEC--------------------CCCEE
T ss_pred             CcHHHHHHhhcccccCCCHHHHHHHH-HHHHHHHHHHHhCCEeecCCCHHHEEEcCCCCCcccccccccccccCCceEEE
Confidence            9998763            3355566 89999999999998       4444                          48


Q ss_pred             EecCCccc-------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         112 FVGIGIGR-------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       112 l~dfg~~~-------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      ++|||.+.       ..||..|  +|||++.+...++.++||||+||++|++++|.+++..
T Consensus       175 l~Dfg~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~~~~~~~~  233 (289)
T 1x8b_A          175 IGDLGHVTRISSPQVEEGDSRF--LANEVLQENYTHLPKADIFALALTVVCAAGAEPLPRN  233 (289)
T ss_dssp             ECCCTTCEETTCSCCCCCCGGG--CCHHHHTTCCTTHHHHHHHHHHHHHHHHTTCCCCCSS
T ss_pred             EcccccccccCCccccCCCccc--cChhHhcCCCCCCchhhHHHHHHHHHHHhcCCCCCcc
Confidence            99999754       4578889  9999997754477899999999999999999987643

>1rjb_A FL cytokine receptor; kinase, structure, autoinhibition, juxtamembrane domain, transferase; 2.10A {Homo sapiens} SCOP: d.144.1.7

Probab=99.94  E-value=2.3e-26  Score=182.18  Aligned_cols=139  Identities=19%  Similarity=0.269  Sum_probs=111.6

Q ss_pred             hhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH-------------------
Q psy7174          25 VNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS-------------------   84 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~-------------------   84 (188)
                      ....+.+.+|+++++++ +||||+++++++        ..+...+++|||+.+++|..+..                   
T Consensus        89 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~--------~~~~~~~lv~e~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~  160 (344)
T 1rjb_A           89 SSEREALMSELKMMTQLGSHENIVNLLGAC--------TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL  160 (344)
T ss_dssp             ---CHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHHHHHHTTTTCC-------------
T ss_pred             HHHHHHHHHHHHHHHhhcCCCCeeeEEEEE--------eeCCccEEEEecCCCCcHHHHHhhccccccccccchhhhccc
Confidence            34567889999999999 899999999986        34567899999999999987532                   


Q ss_pred             ------------HHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cccccc
Q psy7174          85 ------------HLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLY  125 (188)
Q Consensus        85 ------------~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~  125 (188)
                                  .+..++ .|++.||.|||+.+       |+||       +||+|||++.             ..+|..
T Consensus       161 ~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~t~~  239 (344)
T 1rjb_A          161 EEEEDLNVLTFEDLLCFA-YQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPVK  239 (344)
T ss_dssp             --------CCHHHHHHHH-HHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECGG
T ss_pred             ccccccccCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCChhhEEEcCCCcEEeCCCccCcccccCccceeccCccCccC
Confidence                        234466 79999999999998       6666       5999999864             234557


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHH
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRI  175 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i  175 (188)
                      |  +|||++.+.. ++.++|||||||++|+|++ |..||.+.+.......+
T Consensus       240 y--~aPE~~~~~~-~~~~~Di~slG~il~el~t~g~~p~~~~~~~~~~~~~  287 (344)
T 1rjb_A          240 W--MAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKL  287 (344)
T ss_dssp             G--CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHH
T ss_pred             c--cCHHHhccCC-CChhHhHHHHHHHHHHHHcCCCCCcccCCcHHHHHHH
Confidence            9  9999997765 9999999999999999998 99999887654444333

>2buj_A Serine/threonine-protein kinase 16; transferase, ATP-binding, lipoprotein, myristate, PA phosphorylation; HET: STU; 2.6A {Homo sapiens}

Probab=99.94  E-value=1.6e-26  Score=181.01  Aligned_cols=153  Identities=16%  Similarity=0.282  Sum_probs=117.5

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+........+.+.+|++++++++||||+++++++...    .......++++||+.+++|
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~~----~~~~~~~~lv~e~~~~~~L  117 (317)
T 2buj_A           42 FSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAYCLRE----RGAKHEAWLLLPFFKRGTL  117 (317)
T ss_dssp             CEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEEE----ETTEEEEEEEEECCTTCBH
T ss_pred             CeEEEEEEecCCCcEEEEEEEecCCHHHHHHHHHHHHHHhhcCCCCeeeEEEEEEec----cCCCceeEEEEEeCCCCcH
Confidence            677777 2    233334444334556667889999999999999999999986321    1234577999999999999


Q ss_pred             HHHH------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------
Q psy7174          80 ARFY------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------  119 (188)
Q Consensus        80 ~~~~------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------  119 (188)
                      ..+.            ..+..++ .|++.||.|||+.+       |+||       +||+|||++.              
T Consensus       118 ~~~l~~~~~~~~~~~~~~~~~i~-~qi~~~L~~LH~~~ivH~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  196 (317)
T 2buj_A          118 WNEIERLKDKGNFLTEDQILWLL-LGICRGLEAIHAKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALT  196 (317)
T ss_dssp             HHHHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCSSCEESCEEEESHHHHHH
T ss_pred             HHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCHHHEEEcCCCCEEEEecCcchhccccccccccccc
Confidence            7652            3455566 89999999999998       6666       5999999743              


Q ss_pred             ------ccccccccCCCCccccccC--CCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         120 ------HVCTLYCTRGAPELLFGAR--MYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       120 ------~~~~~~y~~~aPe~~~~~~--~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                            ..||..|  +|||++....  .++.++|||||||++|+|++|+.||.
T Consensus       197 ~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~  247 (317)
T 2buj_A          197 LQDWAAQRCTISY--RAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD  247 (317)
T ss_dssp             HHHHHHHHSCGGG--CCGGGSSCCSEEEECTHHHHHHHHHHHHHHHHSSCTTH
T ss_pred             ccccccccCCccc--CCHhHhccCCCcCCCchhhHHHHHHHHHHHHhCCCChh
Confidence                  2358889  9999986532  26889999999999999999999984

>3op5_A Serine/threonine-protein kinase VRK1; adenosine triphosphate, amino acid sequence, binding sites, domain, models, molecular; HET: REB; 2.40A {Homo sapiens} PDB: 2lav_A 2kty_A 2kul_A

Probab=99.94  E-value=1.5e-26  Score=184.95  Aligned_cols=126  Identities=16%  Similarity=0.182  Sum_probs=102.5

Q ss_pred             HHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHHHHHHH
Q psy7174          31 AKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILEGLQAL  101 (188)
Q Consensus        31 ~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~gl~~l  101 (188)
                      ..+|+..++.++||||+++++++...    .......+++|||+ +++|..+.         ..+..++ .|++.||.||
T Consensus        95 ~~~e~~~~~~l~h~~iv~~~~~~~~~----~~~~~~~~lv~e~~-g~~L~~~~~~~~~~l~~~~~~~i~-~qi~~~l~~l  168 (364)
T 3op5_A           95 QIQKWIRTRKLKYLGVPKYWGSGLHD----KNGKSYRFMIMDRF-GSDLQKIYEANAKRFSRKTVLQLS-LRILDILEYI  168 (364)
T ss_dssp             HHHHHHHHTTCSCCCSCCEEEEEEEE----ETTEEEEEEEEECE-EEEHHHHHHHTTSCCCHHHHHHHH-HHHHHHHHHH
T ss_pred             HHHHHHHHhhccCCCCCeEEeeeeec----cCCcceEEEEEeCC-CCCHHHHHHhccCCCCHHHHHHHH-HHHHHHHHHH
Confidence            34566677788899999999986432    11235579999999 99998762         3456677 8999999999


Q ss_pred             hhcC-------CCCe---------EEEecCCccc------------------ccccccccCCCCccccccCCCCchhHHH
Q psy7174         102 KSSM-------PALL---------KKFVGIGIGR------------------HVCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus       102 H~~~-------~~~i---------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      |+.+       |+||         +||+|||++.                  ..||..|  +|||++.+.. ++.++|||
T Consensus       169 H~~~iiHrDlkp~Nill~~~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~  245 (364)
T 3op5_A          169 HEHEYVHGDIKASNLLLNYKNPDQVYLVDYGLAYRYCPEGVHKAYAADPKRCHDGTIEF--TSIDAHNGVA-PSRRGDLE  245 (364)
T ss_dssp             HHTTEECCCCCGGGEEEESSCTTCEEECCCTTCEESSGGGCCCCSSCCSSCCCCCCTTT--CCHHHHTTCC-CCHHHHHH
T ss_pred             HHCCeEEecCCHHHEEEecCCCCeEEEEECCcceecccCCcccccccCcccccCCCCCc--cCHHHhCCCC-CCchhhHH
Confidence            9998       5565         5899999863                  2288899  9999998765 99999999


Q ss_pred             HHHHHHHHHHhCCCCCCC
Q psy7174         148 AVGCIICELLLKAPFLPG  165 (188)
Q Consensus       148 slG~il~el~~g~~pf~~  165 (188)
                      ||||++|||++|+.||.+
T Consensus       246 slG~~l~el~~g~~Pf~~  263 (364)
T 3op5_A          246 ILGYCMIQWLTGHLPWED  263 (364)
T ss_dssp             HHHHHHHHHHHSCCTTGG
T ss_pred             HHHHHHHHHHhCCCCccc
Confidence            999999999999999985

>3lxp_A Non-receptor tyrosine-protein kinase TYK2; JAK3, inflammation, cancer, PAN inhibitor, ATP-binding nucleotide-binding, phosphoprotein, SH2 domain; HET: PTR IZA; 1.65A {Homo sapiens} PDB: 3lxn_A* 3nz0_A* 3nyx_A* 4e20_A* 4e1z_A*

Probab=99.94  E-value=1.1e-26  Score=182.46  Aligned_cols=141  Identities=20%  Similarity=0.229  Sum_probs=113.1

Q ss_pred             ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-------HHHH
Q psy7174          15 SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-------YSHL   86 (188)
Q Consensus        15 ~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-------~~~~   86 (188)
                      .++|.+++. .....+.+.+|++++++++||||+++++++..      .+....+++|||+.+++|..+       ...+
T Consensus        63 vavK~~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~  136 (318)
T 3lxp_A           63 VAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKYKGCCED------AGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL  136 (318)
T ss_dssp             EEEEEECTTCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEEEE------TTTTEEEEEECCCTTCBHHHHGGGSCCCHHHH
T ss_pred             EEEEEeccccChHHHHHHHHHHHHHHhCCCcchhhEEEEEec------CCCceEEEEEecccCCcHHHHHhhCCCCHHHH
Confidence            334444432 33456778999999999999999999998632      234567999999999999886       3456


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccC
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGAR  138 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~  138 (188)
                      ..++ .|++.||.|||+.+       |+||       +||+|||++..              .++..|  +|||++.+..
T Consensus       137 ~~i~-~~l~~~l~~LH~~~ivH~Dikp~Nil~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~  213 (318)
T 3lxp_A          137 LLFA-QQICEGMAYLHAQHYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFW--YAPECLKEYK  213 (318)
T ss_dssp             HHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCGGGCEECCTTCSEEEC---CCCCGGG--CCHHHHHHCE
T ss_pred             HHHH-HHHHHHHHHHHhCCccCCCCchheEEEcCCCCEEECCccccccccccccccccccCCCCCcee--eChHHhcCCC
Confidence            6677 89999999999998       6666       69999998642              345568  9999998765


Q ss_pred             CCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         139 MYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       139 ~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                       ++.++||||+||++|+|++|..||..
T Consensus       214 -~~~~~Di~slG~il~~ll~g~~p~~~  239 (318)
T 3lxp_A          214 -FYYASDVWSFGVTLYELLTHCDSSQS  239 (318)
T ss_dssp             -EEHHHHHHHHHHHHHHHHTTTCGGGS
T ss_pred             -CCcHHHHHHHHHHHHHHHhCCCcccc
Confidence             89999999999999999999999864

>2v62_A Serine/threonine-protein kinase VRK2; transferase, ATP-binding, membrane, nucleotide-binding, TRAN; 1.7A {Homo sapiens}

Probab=99.94  E-value=2.8e-26  Score=182.17  Aligned_cols=127  Identities=15%  Similarity=0.133  Sum_probs=105.9

Q ss_pred             HHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH--------HHHHHHHHHHHHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF--------YSHLRYLENQQILEGLQAL  101 (188)
Q Consensus        30 ~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~l  101 (188)
                      .+.+|+.+++.++||||+++++++...    ..++...+++|||+ +++|..+        +..+..++ .|++.||.||
T Consensus        94 ~~~~e~~~~~~l~h~ni~~~~~~~~~~----~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~L  167 (345)
T 2v62_A           94 DCIKKWIERKQLDYLGIPLFYGSGLTE----FKGRSYRFMVMERL-GIDLQKISGQNGTFKKSTVLQLG-IRMLDVLEYI  167 (345)
T ss_dssp             HHHHHHHHHHTCSCCCCCCEEEEEEEE----SSSCEEEEEEEECE-EEEHHHHCBGGGBCCHHHHHHHH-HHHHHHHHHH
T ss_pred             HHHHHHHhhccccccCcceeecccccc----cCCCcEEEEEEecc-CCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHH
Confidence            466788999999999999999986432    13356789999999 9999876        34566677 8999999999


Q ss_pred             hhcC-------CCCe---------EEEecCCccc------------------ccccccccCCCCccccccCCCCchhHHH
Q psy7174         102 KSSM-------PALL---------KKFVGIGIGR------------------HVCTLYCTRGAPELLFGARMYGVGIDMW  147 (188)
Q Consensus       102 H~~~-------~~~i---------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~~~~~~~~~Diw  147 (188)
                      |+.+       |+||         +||+|||++.                  ..||..|  +|||++.+.. ++.++|||
T Consensus       168 H~~~ivH~Dlkp~NIll~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~  244 (345)
T 2v62_A          168 HENEYVHGDIKAANLLLGYKNPDQVYLADYGLSYRYCPNGNHKQYQENPRKGHNGTIEF--TSLDAHKGVA-LSRRSDVE  244 (345)
T ss_dssp             HHTTEECSCCSGGGEEEESSSTTSEEECCCTTCEESSGGGCCCCCCCCGGGCSCSCTTT--CCHHHHHTCC-CCHHHHHH
T ss_pred             HhCCeeCCCcCHHHEEEccCCCCcEEEEeCCCceecccccccccchhccccccCCCccc--cCHHHhcCCC-CCchhhHH
Confidence            9998       4444         6999999863                  2478899  9999998765 89999999


Q ss_pred             HHHHHHHHHHhCCCCCCC
Q psy7174         148 AVGCIICELLLKAPFLPG  165 (188)
Q Consensus       148 slG~il~el~~g~~pf~~  165 (188)
                      ||||++|+|++|+.||.+
T Consensus       245 slG~il~ell~g~~pf~~  262 (345)
T 2v62_A          245 ILGYCMLRWLCGKLPWEQ  262 (345)
T ss_dssp             HHHHHHHHHHHSSCTTGG
T ss_pred             HHHHHHHHHHhCCCCccc
Confidence            999999999999999954

>3ll6_A Cyclin G-associated kinase; transferase, protein kinase, serine/threonine kinase, cyclin clathrine, membrane trafficking, structural genomics; 2.10A {Homo sapiens}

Probab=99.94  E-value=2.9e-26  Score=180.46  Aligned_cols=160  Identities=15%  Similarity=0.170  Sum_probs=103.9

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+........+.+.+|+.+++++. ||||+++++++..............++++||+. |+
T Consensus        41 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~e~~~l~~l~~h~~iv~~~~~~~~~~~~~~~~~~~~~lv~e~~~-g~  119 (337)
T 3ll6_A           41 FAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCFMKKLSGHPNIVQFCSAASIGKEESDTGQAEFLLLTELCK-GQ  119 (337)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEESSHHHHHHHHHHHHHHHHHTTSTTBCCEEEEEEECTTTSTTSSEEEEEEEECCS-EE
T ss_pred             ceEEEEEEECCCCcEEEEEEecCCchHHHHHHHHHHHHHHHhccCCChhhccccccccccccccCCceEEEEEEecC-CC
Confidence            677887 2    2233444443344555677899999999996 999999999874332222344556799999997 55


Q ss_pred             HHHH-----------HHHHHHHHHHHHHHHHHHHhhcC---------CCCe-------EEEecCCccc------------
Q psy7174          79 KARF-----------YSHLRYLENQQILEGLQALKSSM---------PALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        79 l~~~-----------~~~~~~~~~~qi~~gl~~lH~~~---------~~~i-------lkl~dfg~~~------------  119 (188)
                      +..+           ...+..++ .|++.||.|||+.+         |+||       +||+|||++.            
T Consensus       120 L~~~l~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~~~ivH~Dikp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~  198 (337)
T 3ll6_A          120 LVEFLKKMESRGPLSCDTVLKIF-YQTCRAVQHMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSA  198 (337)
T ss_dssp             HHHHHHHHHTTCSCCHHHHHHHH-HHHHHHHHHHHTSSSCCBCCCCCGGGCEECTTSCEEBCCCTTCBCCSSCC------
T ss_pred             HHHHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHhCCCCEEEccCCcccEEECCCCCEEEecCccceeccccCcccccc
Confidence            5443           23456666 79999999999975         5555       5999999864            


Q ss_pred             -----------ccccccccCCCCcccc--ccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         120 -----------HVCTLYCTRGAPELLF--GARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       120 -----------~~~~~~y~~~aPe~~~--~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                                 ..+|..|  +|||++.  ....++.++|||||||++|+|++|+.||.+...
T Consensus       199 ~~~~~~~~~~~~~~t~~y--~aPE~~~~~~~~~~~~~~Dv~slG~il~el~~g~~p~~~~~~  258 (337)
T 3ll6_A          199 QRRALVEEEITRNTTPMY--RTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPFEDGAK  258 (337)
T ss_dssp             ---------------------------CCTTSCSSHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             cccccchhhccccCCCCc--CChhhhhccccCCCChHHhHHHHHHHHHHHHhCCCCCcchhH
Confidence                       2377889  9999983  223388999999999999999999999975443

>3byv_A Rhoptry kinase; malaria, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii} PDB: 2w1z_A

Probab=99.94  E-value=4.3e-27  Score=189.07  Aligned_cols=179  Identities=13%  Similarity=0.075  Sum_probs=119.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHH---HHHHhCCCCCeeEEeeeccccc---CCC--------CC
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEG---KQDRRLDYANIIQYLSLPVETL---QPT--------TL   62 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~---~il~~l~h~niv~~~~~~~~~~---~~~--------~~   62 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+   +++++++||||+++++.+....   ...        ..
T Consensus        86 ~g~V~~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~hpniv~~~~~~~~~~~~~~~~~~~~~~~~~~  165 (377)
T 3byv_A           86 PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL  165 (377)
T ss_dssp             TEEEEEEEC-CCCCEEEEEEEEECC-CCTTHHHHHHHHHHGGGGSTTCCSHHHHHHHHCBCCCSEEEECTTSCSEEEC--
T ss_pred             CEEEEEEEECCCCcEEEEEEEeeccccchHHHHHHHHHHHHHHhccccCCHHHHHHHhhhhhhhhhhhccCCcccccccc
Confidence            678887 2    333445554431   334557789999   4555667999999985442111   000        00


Q ss_pred             CCC-----ccEEEEeccccccHHHHH---------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe------
Q psy7174          63 STS-----SDYIVVKIFTKTTKARFY---------------SHLRYLENQQILEGLQALKSSM-------PALL------  109 (188)
Q Consensus        63 ~~~-----~~~iv~e~~~~~~l~~~~---------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i------  109 (188)
                      ++.     ..+++|||+ +|+|..+.               ..+..++ .|++.||.|||+++       |+||      
T Consensus       166 ~~~~~~i~~~~lv~E~~-~g~L~~~l~~~~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivHrDikp~NIll~~~~  243 (377)
T 3byv_A          166 DERDMWVLSRFFLYPRM-QSNLQTFGEVLLSHSSTHKSLVHHARLQLT-LQVIRLLASLHHYGLVHTYLRPVDIVLDQRG  243 (377)
T ss_dssp             ----CEEESEEEEEECC-SEEHHHHHHHHHHTTTTTHHHHHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CCCceEEEEEEEEEecc-CCCHHHHHHhccccccccccccHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEEcCCC
Confidence            111     378999999 57887753               2233466 89999999999998       6666      


Q ss_pred             -EEEecCCccc--------ccccccccCCCCcccccc----------CCCCchhHHHHHHHHHHHHHhCCCCCCCCCh--
Q psy7174         110 -KKFVGIGIGR--------HVCTLYCTRGAPELLFGA----------RMYGVGIDMWAVGCIICELLLKAPFLPGESD--  168 (188)
Q Consensus       110 -lkl~dfg~~~--------~~~~~~y~~~aPe~~~~~----------~~~~~~~DiwslG~il~el~~g~~pf~~~~~--  168 (188)
                       +||+|||++.        ..| ..|  +|||++.+.          ..++.++|||||||++|||++|+.||.+.+.  
T Consensus       244 ~~kL~DFG~a~~~~~~~~~~~g-~~y--~aPE~~~~~~~~~~~~~~~~~~~~~~DvwSlG~il~elltg~~Pf~~~~~~~  320 (377)
T 3byv_A          244 GVFLTGFEHLVRDGARVVSSVS-RGF--EPPELEARRATISYHRDRRTLMTFSFDAWALGLVIYWIWCADLPITKDAALG  320 (377)
T ss_dssp             CEEECCGGGCEETTCEEECCCC-TTC--CCHHHHHHHTSTHHHHCCEEECCHHHHHHHHHHHHHHHHHSSCCC------C
T ss_pred             CEEEEechhheecCCcccCCCC-cCc--cChhhhcccccccccccccccCChhhhHHHHHHHHHHHHHCCCCCccccccc
Confidence             5999999865        345 889  999999875          1399999999999999999999999965432  


Q ss_pred             ------------HHHHHHHHhhcCCCCCCCCC
Q psy7174         169 ------------LDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       169 ------------~~~~~~i~~~~~~p~~~~~p  188 (188)
                                  ...+..+++.+..+.|+..|
T Consensus       321 ~~~~~~~~~~~~~~~~~~li~~~L~~dp~~Rp  352 (377)
T 3byv_A          321 GSEWIFRSCKNIPQPVRALLEGFLRYPKEDRL  352 (377)
T ss_dssp             CSGGGGSSCCCCCHHHHHHHHHHTCSSGGGCC
T ss_pred             chhhhhhhccCCCHHHHHHHHHHcCCCchhCC
Confidence                        22344555555555665544

>3p1a_A MYT1 kinase, membrane-associated tyrosine- and threonine-speci inhibitory kinase; structural genomics, structural genomics consortium, SGC; 1.70A {Homo sapiens}

Probab=99.94  E-value=1e-25  Score=176.56  Aligned_cols=170  Identities=16%  Similarity=0.151  Sum_probs=120.5

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...  .........+|+..+.++ +||||++++++|        .++...++++|++. 
T Consensus        70 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~e~~~~~~~~~h~~iv~l~~~~--------~~~~~~~lv~e~~~-  140 (311)
T 3p1a_A           70 YGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQAW--------EEGGILYLQTELCG-  140 (311)
T ss_dssp             TEEEEEEEETTTSCEEEEEEESSSCCSHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCC-
T ss_pred             CeEEEEEEECCCCeEEEEEEecccccChHHHHHHHHHHHHHHHhcCCCcEEEEEEEE--------EeCCEEEEEEeccC-
Confidence            678887 2    333344433321  233444556666666555 899999999986        34677899999994 


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------cccc
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCT  123 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~  123 (188)
                      +++..+         +..+..++ .|++.||.|||+.+       |+||       +||+|||++.          ..||
T Consensus       141 ~~L~~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~ivH~Dikp~NIll~~~~~~kl~DFG~a~~~~~~~~~~~~~gt  219 (311)
T 3p1a_A          141 PSLQQHCEAWGASLPEAQVWGYL-RDTLLALAHLHSQGLVHLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGD  219 (311)
T ss_dssp             CBHHHHHHHHCSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECGGGCEEECCCTTCEECC------CCCCC
T ss_pred             CCHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCEecCCCCHHHEEECCCCCEEEccceeeeecccCCCCcccCCC
Confidence            555543         23456667 89999999999998       6777       5999999854          3478


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh-----------------HHHHHHHHhhcCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD-----------------LDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~-----------------~~~~~~i~~~~~~p~~~~  186 (188)
                      ..|  +|||++.+ . ++.++||||+||++|||++|..|+.+...                 ...+..++..+..+.|+.
T Consensus       220 ~~y--~aPE~~~~-~-~~~~~DiwslG~il~el~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~L~~dP~~  295 (311)
T 3p1a_A          220 PRY--MAPELLQG-S-YGTAADVFSLGLTILEVACNMELPHGGEGWQQLRQGYLPPEFTAGLSSELRSVLVMMLEPDPKL  295 (311)
T ss_dssp             GGG--CCGGGGGT-C-CSTHHHHHHHHHHHHHHHHTCCCCSSHHHHHHHTTTCCCHHHHTTSCHHHHHHHHHHSCSSTTT
T ss_pred             ccc--cCHhHhcC-C-CCchhhHHHHHHHHHHHHhCCCCCCCccHHHHHhccCCCcccccCCCHHHHHHHHHHcCCChhh
Confidence            899  99999876 4 89999999999999999999766543221                 133445555556666666


Q ss_pred             CC
Q psy7174         187 WP  188 (188)
Q Consensus       187 ~p  188 (188)
                      .|
T Consensus       296 Rp  297 (311)
T 3p1a_A          296 RA  297 (311)
T ss_dssp             SC
T ss_pred             Cc
Confidence            54

>1csn_A Casein kinase-1; phosphotransferase; HET: ATP; 2.00A {Schizosaccharomyces pombe} SCOP: d.144.1.7 PDB: 1eh4_A* 2csn_A*

Probab=99.94  E-value=4.9e-26  Score=176.59  Aligned_cols=149  Identities=13%  Similarity=0.095  Sum_probs=116.5

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .++... .+++|.. .....+.+.+|+++++++ +|+|++++++++        .++...++++||+ +++|.
T Consensus        23 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~--------~~~~~~~lv~e~~-~~~L~   93 (298)
T 1csn_A           23 FGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG--------QEGLHNVLVIDLL-GPSLE   93 (298)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEE--------EETTEEEEEEECC-CCBHH
T ss_pred             CEEEEEEEECCCCcEEEEEEeccCCccHHHHHHHHHHHHHhcCCCCCeEEeec--------CCCceeEEEEEec-CCCHH
Confidence            677787 222222 3444432 233456789999999999 699999999975        3456789999999 88988


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe------------EEEecCCccc-------------
Q psy7174          81 RFY---------SHLRYLENQQILEGLQALKSSM-------PALL------------KKFVGIGIGR-------------  119 (188)
Q Consensus        81 ~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i------------lkl~dfg~~~-------------  119 (188)
                      .+.         ..+..++ .|++.||.|||+++       |+||            +||+|||++.             
T Consensus        94 ~~l~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~Dlkp~NIl~~~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~  172 (298)
T 1csn_A           94 DLLDLCGRKFSVKTVAMAA-KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY  172 (298)
T ss_dssp             HHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCC
T ss_pred             HHHHHhccCCCHHHHHHHH-HHHHHHHHHHHhCCEecCCCCHHHEEeccCCCCCCCeEEEEECccccccccccccccccc
Confidence            763         3466677 89999999999998       4444            6899999754             


Q ss_pred             -----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 -----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                           ..||..|  +|||++.+.. ++.++|||||||++|+|++|+.||.+.
T Consensus       173 ~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~  221 (298)
T 1csn_A          173 REKKNLSGTARY--MSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGL  221 (298)
T ss_dssp             CCCCCCCSCTTT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cCccCCCCCccc--CCchhhcCCC-CChHHHHHHHHHHHHHHHcCCCCcchh
Confidence                 2477889  9999998765 899999999999999999999999874

>2vwi_A Serine/threonine-protein kinase OSR1; STE kinase, hypertension, transferase; HET: ANP; 2.15A {Homo sapiens} PDB: 3dak_A*

Probab=99.93  E-value=1.5e-26  Score=179.77  Aligned_cols=156  Identities=17%  Similarity=0.170  Sum_probs=109.2

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+... .....+++.+|++++++++||||+++++++        ..+...++++||+.+++
T Consensus        28 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~   99 (303)
T 2vwi_A           28 TAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSF--------VVKDELWLVMKLLSGGS   99 (303)
T ss_dssp             CCCEEEEEC----CEEEEECCC----------------CCCCCCCTTBCCEEEEE--------ESSSCEEEEEECCTTCB
T ss_pred             ceEEEEEEECCCCcEEEEEEEEhhhcchhHHHHHHHHHHHhhcCCCCEeeEEEEE--------eecCCcEEEehhccCCc
Confidence            677777 2    222334433322 233456788999999999999999999986        34567899999999999


Q ss_pred             HHHHH----------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------
Q psy7174          79 KARFY----------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------  119 (188)
Q Consensus        79 l~~~~----------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------  119 (188)
                      |..+.                ..+..++ .|++.||.|||+.+       |+||       +||+|||++.         
T Consensus       100 L~~~l~~~~~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~  178 (303)
T 2vwi_A          100 VLDIIKHIVAKGEHKSGVLDESTIATIL-REVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDIT  178 (303)
T ss_dssp             HHHHHHHHHHTTTTTTCSSCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCHHHHHCC------
T ss_pred             hHHHHHHHhhccccccCCCCHHHHHHHH-HHHHHHHHHHHhCCCCCCCCChhhEEEcCCCCEEEEeccchheeccCCCcc
Confidence            88753                2355566 79999999999998       5565       5999999643         


Q ss_pred             -------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHH
Q psy7174         120 -------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQ  171 (188)
Q Consensus       120 -------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~  171 (188)
                             ..||..|  +|||++.....++.++||||+||++|+|++|+.||.+.+....
T Consensus       179 ~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~  235 (303)
T 2vwi_A          179 RNKVRKTFVGTPCW--MAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKV  235 (303)
T ss_dssp             ---------CCCTT--CCHHHHHHHHCCCTHHHHHHHHHHHHHHHHSSCTTTTSCGGGH
T ss_pred             chhhhcccCCCccc--cCHHHhccccCCCchhhHHHHHHHHHHHHhCCCCCccCchhhH
Confidence                   3477889  9999987533489999999999999999999999987654433

>1vzo_A Ribosomal protein S6 kinase alpha 5; protein kinase, transferase, phosphorylation, serine/threonine protein kinase; 1.8A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=1.2e-26  Score=185.20  Aligned_cols=151  Identities=13%  Similarity=0.174  Sum_probs=116.6

Q ss_pred             cccccc--------cCCcccccccccc----chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ--------QSKWSPNTPMARC----DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~--------~~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||+        +++..++|.+++.    .....+.+.+|+++++++ +||||+++++++        ..+...+++|
T Consensus        67 ~g~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~E~~~l~~l~~h~~iv~~~~~~--------~~~~~~~lv~  138 (355)
T 1vzo_A           67 YGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF--------QTETKLHLIL  138 (355)
T ss_dssp             TEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE--------EETTEEEEEE
T ss_pred             CEEEEEEEEcccCCCCeEEEEEEEeHHHhhhhhhHHHHHHHHHHHHHHccCCCceeEEEEEE--------eeCceEEEEe
Confidence            677885        1223335544442    123456678899999999 699999999976        3456789999


Q ss_pred             eccccccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          72 KIFTKTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        72 e~~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      ||+.+++|..+.        ..+..++ .|++.||.|||+.+       |+||       +||+|||++.          
T Consensus       139 e~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~aL~~LH~~~ivH~Dlkp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~  217 (355)
T 1vzo_A          139 DYINGGELFTHLSQRERFTEHEVQIYV-GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA  217 (355)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG
T ss_pred             ecCCCCCHHHHHHHcCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEECCCCcEEEeeCCCCeecccCCCCcc
Confidence            999999998763        3466667 79999999999988       6666       5999999754          


Q ss_pred             --ccccccccCCCCcccccc-CCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGA-RMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~-~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                        ..||..|  +|||++.+. ..++.++|||||||++|+|++|+.||...
T Consensus       218 ~~~~gt~~y--~aPE~~~~~~~~~~~~~DvwslG~il~ell~g~~pf~~~  265 (355)
T 1vzo_A          218 YDFCGTIEY--MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVD  265 (355)
T ss_dssp             CGGGSCCTT--CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCT
T ss_pred             cCcccCcCc--cChhhhcCCCCCCCchhhHHHHHHHHHHHHHCCCCCccC
Confidence              3578899  999999752 23789999999999999999999999753

>2rio_A Serine/threonine-protein kinase/endoribonuclease IRE1; protein-nucleotide complex, ATP-binding, endoplasmic reticulum, glycoprotein; HET: ADP; 2.40A {Saccharomyces cerevisiae} PDB: 3lj0_A* 3lj1_A* 3lj2_A* 3fbv_A* 3sdm_A* 3sdj_A*

Probab=99.93  E-value=5e-26  Score=186.19  Aligned_cols=151  Identities=21%  Similarity=0.200  Sum_probs=112.5

Q ss_pred             cccccccCCccc-cccccccchhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQQSKWSP-NTPMARCDVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~~~~~~~-~~~i~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||..++... .+|+|+...+..+.+.+|+++++++ +||||+++++++        .++...++++||+. |+|..+
T Consensus        28 ~g~V~~~~~~~g~~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~--------~~~~~~~lv~E~~~-gsL~~~   98 (434)
T 2rio_A           28 SGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDDHPNVIRYYCSE--------TTDRFLYIALELCN-LNLQDL   98 (434)
T ss_dssp             TTCEEEEEESSSSEEEEEEEEGGGHHHHHHHHHHHHHHTTSTTBCCEEEEE--------ECSSEEEEEECCCS-EEHHHH
T ss_pred             CeEEEEEEEECCeEEEEEEEcHHHHHHHHHHHHHHHhccCCCCcCeEEEEE--------ecCCeEEEEEecCC-CCHHHH
Confidence            677765222222 4555554445556788999999876 899999999975        45677899999996 587775


Q ss_pred             HH---------------HHHHHHHHHHHHHHHHHhhcC-------CCCe--------------------EEEecCCccc-
Q psy7174          83 YS---------------HLRYLENQQILEGLQALKSSM-------PALL--------------------KKFVGIGIGR-  119 (188)
Q Consensus        83 ~~---------------~~~~~~~~qi~~gl~~lH~~~-------~~~i--------------------lkl~dfg~~~-  119 (188)
                      ..               .+..++ .|++.||.|||+.+       |+||                    +||+|||++. 
T Consensus        99 l~~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivHrDLkp~NILl~~~~~~~~~~~~~~~~~~~kL~DFG~a~~  177 (434)
T 2rio_A           99 VESKNVSDENLKLQKEYNPISLL-RQIASGVAHLHSLKIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKK  177 (434)
T ss_dssp             HHTC------------CCHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEECCHHHHSCCTTCCCSCEEEECCCTTCEE
T ss_pred             HhccCCCchhhhhccchhHHHHH-HHHHHHHHHHHHCCccccCCChHhEEEecCcccccccccCCCceEEEEccccccee
Confidence            31               123356 79999999999998       4444                    5799999753 


Q ss_pred             --------------ccccccccCCCCccccc------cCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q psy7174         120 --------------HVCTLYCTRGAPELLFG------ARMYGVGIDMWAVGCIICELLL-KAPFLPGES  167 (188)
Q Consensus       120 --------------~~~~~~y~~~aPe~~~~------~~~~~~~~DiwslG~il~el~~-g~~pf~~~~  167 (188)
                                    ..||+.|  +|||++.+      ...++.++||||+||++|||++ |..||.+..
T Consensus       178 ~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~~~~~DiwSlG~il~ellt~g~~Pf~~~~  244 (434)
T 2rio_A          178 LDSGQSSFRTNLNNPSGTSGW--RAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHPFGDKY  244 (434)
T ss_dssp             CCC--------------CCTT--SCHHHHSCCCTTSCCCCCCTHHHHHHHHHHHHHHHTTSCCTTCSTT
T ss_pred             cCCCCccceeeecCCCCCCCc--cCHHHhccccccccccCcchhhhhHhHHHHHHHHHhCCCCCCCCch
Confidence                          2578899  99999865      1348999999999999999998 999997654

>2y4i_B KSR2, HKSR2, kinase suppressor of RAS 2; transferase, KSR1; HET: ATP; 3.46A {Homo sapiens}

Probab=99.93  E-value=2.2e-26  Score=180.27  Aligned_cols=163  Identities=14%  Similarity=0.083  Sum_probs=126.5

Q ss_pred             cccccc--cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ--QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+  .....++|.++..  .....+.+.+|++++++++||||+++++++        .+....++++||+.+++|.
T Consensus        46 ~g~V~~~~~~~~~avk~~~~~~~~~~~~~~~~~e~~~l~~l~h~~iv~~~~~~--------~~~~~~~iv~e~~~~~~L~  117 (319)
T 2y4i_B           46 FGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGAC--------MSPPHLAIITSLCKGRTLY  117 (319)
T ss_dssp             SSEEEEEEESSSEEEEECCCCSCCCCCCCCCCTTGGGGTTCCCTTBCCCCEEE--------ECSSCEEEECBCCCSEEHH
T ss_pred             ceEEEEEEEcCeEEEEEeecCCCCHHHHHHHHHHHHHHhcCCCCCEeEEEEEE--------ecCCceEEEeecccCCcHH
Confidence            577776  2223334544432  334456788999999999999999999986        3456789999999999998


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc----------------ccc
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR----------------HVC  122 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~----------------~~~  122 (188)
                      .+         ...+..++ .|++.||.|||+.+       |+||      +||+|||++.                ..|
T Consensus       118 ~~l~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~i~H~dlkp~NIl~~~~~~~l~Dfg~~~~~~~~~~~~~~~~~~~~~g  196 (319)
T 2y4i_B          118 SVVRDAKIVLDVNKTRQIA-QEIVKGMGYLHAKGILHKDLKSKNVFYDNGKVVITDFGLFSISGVLQAGRREDKLRIQNG  196 (319)
T ss_dssp             HHTTSSCCCCCSHHHHHHH-HHHHHHHHHHHHTTCCCCCCCSTTEEEC--CCEECCCSCCC----------CCSCBCCSG
T ss_pred             HHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHhCCccccCCChhhEEEeCCCEEEeecCCccccccccccccccccccCCC
Confidence            86         24566677 89999999999998       7777      4999999743                236


Q ss_pred             cccccCCCCccccc--------cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFG--------ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~--------~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +..|  +|||++..        ...++.++|||||||++|+|++|+.||.+.+.......+...
T Consensus       197 ~~~y--~aPE~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~p~~~~~~~~~~~~~~~~  258 (319)
T 2y4i_B          197 WLCH--LAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAEAIIWQMGTG  258 (319)
T ss_dssp             GGGT--SCHHHHSCBSCC--CCCSCCCHHHHHHHHHHHHHHHHHSSCSSSSCCHHHHHHHHHTT
T ss_pred             cccc--cChHHhhhccccccccccCCCchhhHHHHHHHHHHHHhCCCCCCCCCHHHHHHHhccC
Confidence            7789  99999864        223789999999999999999999999988777666665544

>2wtk_C Serine/threonine-protein kinase 11; transferase-metal-binding protein complex, transferase metal protein complex, nucleus; HET: ANP; 2.65A {Homo sapiens}

Probab=99.93  E-value=1.5e-25  Score=174.54  Aligned_cols=164  Identities=19%  Similarity=0.209  Sum_probs=121.1

Q ss_pred             cccccc-cC----Ccccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .+    +..++|.+++.    .....+.+.+|++++++++||||+++++++..      .+....++++||+.
T Consensus        18 ~g~V~~~~~~~~~~~~avK~~~~~~~~~~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~   91 (305)
T 2wtk_C           18 YGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLRHKNVIQLVDVLYN------EEKQKMYMVMEYCV   91 (305)
T ss_dssp             SCEEEEEEBTTTCCEEEEEEECHHHHHHSTTHHHHHHHHHHHHTTCCCTTBCCEEEEEEC------C---CEEEEEECCS
T ss_pred             CeEEEEEEECCCCcEEEEEEeccccccccchhHHHHHHHHHHHHhcCCCCeeEEEEEEEc------CCCCeEEEEehhcc
Confidence            677887 22    22334444432    12345678999999999999999999998632      33557899999999


Q ss_pred             cccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------
Q psy7174          76 KTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        76 ~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      ++....+         ...+..++ .|++.||.|||+++       |+||       +|++|||++.             
T Consensus        92 ~~l~~~~~~~~~~~~~~~~~~~~~-~qi~~al~~LH~~~i~H~dlkp~NIl~~~~~~~kl~dfg~~~~~~~~~~~~~~~~  170 (305)
T 2wtk_C           92 CGMQEMLDSVPEKRFPVCQAHGYF-CQLIDGLEYLHSQGIVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRT  170 (305)
T ss_dssp             EEHHHHHHHSTTCSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCSSCEECC
T ss_pred             CCHHHHHHhCcccccCHHHHHHHH-HHHHHHHHHHHHCCeeecCCCcccEEEcCCCcEEeeccccccccCcccccccccc
Confidence            8843332         23456666 79999999999998       6666       5999999754             


Q ss_pred             ccccccccCCCCccccccC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         120 HVCTLYCTRGAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      ..|+..|  +|||++.+.. .++.++||||+|+++|+|++|+.||.+.+.......+..
T Consensus       171 ~~~~~~y--~aPE~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~i~~  227 (305)
T 2wtk_C          171 SQGSPAF--QPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEGDNIYKLFENIGK  227 (305)
T ss_dssp             CCSCGGG--CCHHHHTCCSCEESHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHH
T ss_pred             CCCCCCC--cChhhccCcccCCcchhhHHHHHHHHHHHHhCCCCCCCchHHHHHHHHhc
Confidence            2467889  9999987533 247899999999999999999999998776665555443

>3q60_A ROP5B; pseudokinase, transferase; HET: ATP; 1.72A {Toxoplasma gondii} PDB: 3q5z_A*

Probab=99.93  E-value=3e-26  Score=183.65  Aligned_cols=157  Identities=11%  Similarity=0.038  Sum_probs=101.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhC--CCCCeeEEeeecc-------cccCCC-------
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRL--DYANIIQYLSLPV-------ETLQPT-------   60 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l--~h~niv~~~~~~~-------~~~~~~-------   60 (188)
                      ||.||+ .    ++..++|.+++.   .....+.+.+|+++++.+  +||||++++..++       ....+.       
T Consensus        75 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~hp~iv~~~~~~~~p~d~~~~~~~~~~~~~~~~  154 (371)
T 3q60_A           75 RSVVFLVRDVERLEDFALKVFTMGAENSRSELERLHEATFAAARLLGESPEEARDRRRLLLPSDAVAVQSQPPFAQLSPG  154 (371)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHHHC----------CBCCCCEEEEETTSCSSSBCSCC
T ss_pred             CEEEEEEEECCCCceeEEEEEEecccccccHHHHHHHHHHHHHHhcccChhhhhhceeEEeeehheecCCCCCeeeccCC
Confidence            678887 2    223345544442   224456677885554444  6999888653321       110000       


Q ss_pred             --CCCCCccEEEEeccccccHHHHHHH---------H------HHHHHHHHHHHHHHHhhcC-------CCCe-------
Q psy7174          61 --TLSTSSDYIVVKIFTKTTKARFYSH---------L------RYLENQQILEGLQALKSSM-------PALL-------  109 (188)
Q Consensus        61 --~~~~~~~~iv~e~~~~~~l~~~~~~---------~------~~~~~~qi~~gl~~lH~~~-------~~~i-------  109 (188)
                        .......+++|||+. ++|..+...         .      ..++ .|++.||.|||+++       |+||       
T Consensus       155 ~~~~~~~~~~lv~e~~~-~~L~~~l~~~~~~~~~~~~~~~~vk~~i~-~qi~~aL~~LH~~~ivHrDikp~NIll~~~~~  232 (371)
T 3q60_A          155 QDDYAVANYLLLMPAAS-VDLELLFSTLDFVYVFRGDEGILALHILT-AQLIRLAANLQSKGLVHGHFTPDNLFIMPDGR  232 (371)
T ss_dssp             ---CCEEEEEEEECCCS-EEHHHHHHHHHHSCCCCHHHHHHHHHHHH-HHHHHHHHHHHHTTEEETTCSGGGEEECTTSC
T ss_pred             cccceeeeEEEEecCCC-CCHHHHHHHhccccchhhhhhhhhHHHHH-HHHHHHHHHHHHCCCccCcCCHHHEEECCCCC
Confidence              000134799999999 888876432         2      3454 79999999999998       6666       


Q ss_pred             EEEecCCccc--------ccccccccCCCCccccc--cCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         110 KKFVGIGIGR--------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       110 lkl~dfg~~~--------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      +||+|||++.        ..++..|  +|||++.+  .. ++.++||||+||++|+|++|+.||.+.
T Consensus       233 ~kL~DFG~a~~~~~~~~~~~~t~~y--~aPE~~~~~~~~-~~~~~DiwSlG~il~elltg~~Pf~~~  296 (371)
T 3q60_A          233 LMLGDVSALWKVGTRGPASSVPVTY--APREFLNASTAT-FTHALNAWQLGLSIYRVWCLFLPFGLV  296 (371)
T ss_dssp             EEECCGGGEEETTCEEEGGGSCGGG--CCHHHHTCSEEE-CCHHHHHHHHHHHHHHHHHSSCSTTBC
T ss_pred             EEEEecceeeecCCCccCccCCcCC--cChhhccCCCCC-cCccccHHHHHHHHHHHHhCCCCCCCc
Confidence            5999999864        4567889  99999975  34 899999999999999999999999765

>1u46_A ACK-1, activated CDC42 kinase 1; tyrosine kinase, transferase; 2.00A {Homo sapiens} SCOP: d.144.1.7 PDB: 1u4d_A* 1u54_A* 3eqr_A* 3eqp_B*

Probab=99.93  E-value=2.1e-25  Score=172.43  Aligned_cols=139  Identities=20%  Similarity=0.201  Sum_probs=114.0

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|++++++++||||+++++++.         ....++++|++.++++..+.         ..+..++ .|++.
T Consensus        63 ~~~~~~~~e~~~l~~l~h~~i~~~~~~~~---------~~~~~~v~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~  132 (291)
T 1u46_A           63 EAMDDFIREVNAMHSLDHRNLIRLYGVVL---------TPPMKMVTELAPLGSLLDRLRKHQGHFLLGTLSRYA-VQVAE  132 (291)
T ss_dssp             HHHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SSSCEEEEECCTTCBHHHHHHHHGGGSCHHHHHHHH-HHHHH
T ss_pred             HHHHHHHHHHHHHHhCCCCCcccEEEEEc---------cCCceeeEecccCCCHHHHHHhccCCcCHHHHHHHH-HHHHH
Confidence            45577889999999999999999999852         23489999999999988752         3455666 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCCCCchhHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ||.|||+++       |+|+       +||+|||++..              .++..|  +|||++.+.. ++.++|+||
T Consensus       133 ~l~~lH~~~i~H~dikp~Nili~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~s  209 (291)
T 1u46_A          133 GMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAW--CAPESLKTRT-FSHASDTWM  209 (291)
T ss_dssp             HHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC-----CCGGG--CCHHHHHHCE-EEHHHHHHH
T ss_pred             HHHHHHhCCcccCCCchheEEEcCCCCEEEccccccccccccccchhhhccCCCCcee--eCchhhcCCC-CCchhhHHH
Confidence            999999998       6666       59999997542              245568  9999997755 899999999


Q ss_pred             HHHHHHHHHh-CCCCCCCCChHHHHHHHHh
Q psy7174         149 VGCIICELLL-KAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       149 lG~il~el~~-g~~pf~~~~~~~~~~~i~~  177 (188)
                      +|+++|+|++ |+.||.+.+..+....+..
T Consensus       210 lG~il~~l~~~g~~p~~~~~~~~~~~~~~~  239 (291)
T 1u46_A          210 FGVTLWEMFTYGQEPWIGLNGSQILHKIDK  239 (291)
T ss_dssp             HHHHHHHHHTTSCCTTTTCCHHHHHHHHHT
T ss_pred             HHHHHHHHHhCCCCCcccCCHHHHHHHHHc
Confidence            9999999999 9999998887776666654

>2xir_A Vascular endothelial growth factor receptor 2; angiogenesis, nucleotide-binding, inhibitor, phosphorylation receptor, transferase, transmembrane; HET: 00J; 1.50A {Homo sapiens} PDB: 1vr2_A* 1ywn_A* 3vnt_A* 3c7q_A* 2oh4_A* 3u6j_A* 3efl_A* 2p2i_A* 3cjf_A* 3cjg_A* 3ewh_A* 2qu5_A* 2qu6_A* 2rl5_A* 3b8q_A* 3b8r_A* 2p2h_A* 3cp9_A* 3cpb_A* 3cpc_A* ...

Probab=99.93  E-value=1.4e-25  Score=175.28  Aligned_cols=134  Identities=20%  Similarity=0.272  Sum_probs=109.3

Q ss_pred             hhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH--------------------
Q psy7174          25 VNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY--------------------   83 (188)
Q Consensus        25 ~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~--------------------   83 (188)
                      ....+.+.+|+++++++ +||||+++++++.       ..+...++++||+.+++|..+.                    
T Consensus        71 ~~~~~~~~~E~~~l~~l~~hp~iv~~~~~~~-------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~~~~~  143 (316)
T 2xir_A           71 HSEHRALMSELKILIHIGHHLNVVNLLGACT-------KPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKD  143 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------CTTSCCEEEEECCTTEEHHHHHHTCTTSEECC-------CTT
T ss_pred             cHHHHHHHHHHHHHHhcccCCCeeeEEEEEe-------cCCCceEEEEEcCCCCcHHHHHHhcccccccccccchhhhcc
Confidence            34456788999999999 6999999999852       2244689999999999998753                    


Q ss_pred             ----HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccccccCCCCc
Q psy7174          84 ----SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLYCTRGAPE  132 (188)
Q Consensus        84 ----~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y~~~aPe  132 (188)
                          ..+..++ .|++.||.|||+.+       |+||       +||+|||++.             ..+|..|  +|||
T Consensus       144 ~~~~~~~~~~~-~qi~~al~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~t~~y--~aPE  220 (316)
T 2xir_A          144 FLTLEHLICYS-FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKW--MAPE  220 (316)
T ss_dssp             CEEHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCGGGSCTTTCTTSEEETTEEECGGG--CCHH
T ss_pred             ccCHHHHHHHH-HHHHHHHHHHHhCCcccccCccceEEECCCCCEEECCCccccccccCccceeccCCCcceee--cCch
Confidence                2355566 79999999999998       6666       5999999764             2345679  9999


Q ss_pred             cccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChH
Q psy7174         133 LLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDL  169 (188)
Q Consensus       133 ~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~  169 (188)
                      ++.+.. ++.++||||+||++|+|++ |..||.+.+..
T Consensus       221 ~~~~~~-~~~~~Di~slG~il~~l~t~g~~p~~~~~~~  257 (316)
T 2xir_A          221 TIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKID  257 (316)
T ss_dssp             HHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCS
T ss_pred             hhcccc-ccchhHHHHHHHHHHHHHhCCCCCCcccchh
Confidence            998755 8999999999999999998 99999876543

>2x7f_A TRAF2 and NCK-interacting protein kinase; serine/threonine-protein kinase, phosphoprotein; HET: 824; 2.80A {Homo sapiens}

Probab=99.93  E-value=1.6e-25  Score=175.93  Aligned_cols=167  Identities=19%  Similarity=0.234  Sum_probs=121.9

Q ss_pred             cccccc-cCC-cccccccccc--chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSK-WSPNTPMARC--DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~-~~~~~~i~~~--~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ ..+ ....+++|..  .....+.+.+|+++++++ +||||+++++++.....  ...+...++++||+.+++|
T Consensus        37 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~h~~i~~~~~~~~~~~~--~~~~~~~~lv~e~~~~~~L  114 (326)
T 2x7f_A           37 YGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFIKKNP--PGMDDQLWLVMEFCGAGSV  114 (326)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSSTTHHHHHHHHHHHHHCCSTTBCCEEEEEEECC----CCCCEEEEEEECCTTEEH
T ss_pred             CEEEEEEEECCCCCeEEEEEEecCcccHHHHHHHHHHHHhccCCCCeeeeeeEEeeccC--ccccceEEEEEEcCCCCcH
Confidence            677787 221 1113334332  334557889999999998 79999999998743211  1124578999999999999


Q ss_pred             HHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          80 ARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        80 ~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ..+.          ..+..++ .|++.||.|||+.+       |+||       +||+|||++.           ..|+.
T Consensus       115 ~~~l~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  193 (326)
T 2x7f_A          115 TDLIKNTKGNTLKEEWIAYIC-REILRGLSHLHQHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTP  193 (326)
T ss_dssp             HHHHHHSGGGCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCSGGGEEECTTCCEEECCCTTTC-------------CCG
T ss_pred             HHHHHhcccCCCCHHHHHHHH-HHHHHHHHHHHHCCccccCCcHHHEEEcCCCCEEEeeCcCceecCcCccccccccCCc
Confidence            8763          3355666 89999999999998       5566       5999999754           34788


Q ss_pred             cccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         125 YCTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       125 ~y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                      .|  +|||++..    ...++.++|||||||++|+|++|..||.+.+.......+.
T Consensus       194 ~y--~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~~~~~~~~~~~~  247 (326)
T 2x7f_A          194 YW--MAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPLCDMHPMRALFLIP  247 (326)
T ss_dssp             GG--CCHHHHC--------CCTTHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHH
T ss_pred             cc--cChhhhccccccCcCCCccchHHHHHHHHHHHHhCCCCCCCCcHHHHHHHhh
Confidence            89  99999862    2338899999999999999999999998877666555443

>1z57_A Dual specificity protein kinase CLK1; protein tyrosine kinase, splicing, human, 10Z-hymendialdisine, structural genomics; HET: DBQ; 1.70A {Homo sapiens} PDB: 2vag_A*

Probab=99.93  E-value=1.2e-25  Score=176.94  Aligned_cols=166  Identities=22%  Similarity=0.293  Sum_probs=127.1

Q ss_pred             cccccc-cC-Cccc-ccccccc--chhhhhHHHHHHHHHHhCCCCC------eeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QS-KWSP-NTPMARC--DVNVETQAKAEGKQDRRLDYAN------IIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~-~~~~-~~~i~~~--~~~~~~~~~~E~~il~~l~h~n------iv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .. +... .+++|..  .....+.+.+|+++++.++|+|      ++++++++        ..+...+++|||
T Consensus        27 ~g~V~~~~~~~~~~~~vavK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~i~~~~~~~--------~~~~~~~lv~e~   98 (339)
T 1z57_A           27 FGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLNTTDPNSTFRCVQMLEWF--------EHHGHICIVFEL   98 (339)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHCTTCTTCBCCEEEEE--------EETTEEEEEEEC
T ss_pred             CeEEEEEEecCCCCcEEEEEEEecCCchhHHHHHHHHHHHHhhhcCCCCceeeEeeeccc--------ccCCcEEEEEcC
Confidence            677886 21 2222 3344432  2344567889999999987664      89999975        345688999999


Q ss_pred             cccccHHHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------------------------E
Q psy7174          74 FTKTTKARF----------YSHLRYLENQQILEGLQALKSSM-------PALL--------------------------K  110 (188)
Q Consensus        74 ~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------------------------l  110 (188)
                      + ++++..+          ...+..++ .|++.||.|||+++       |+||                          +
T Consensus        99 ~-~~~l~~~l~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~ivH~Dlkp~Nil~~~~~~~~~~~~~~~~~~~~~~~~~~  176 (339)
T 1z57_A           99 L-GLSTYDFIKENGFLPFRLDHIRKMA-YQICKSVNFLHSNKLTHTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDI  176 (339)
T ss_dssp             C-CCBHHHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESCCCEEEEEC----CEEEEESCCCE
T ss_pred             C-CCCHHHHHHhcCCCCCcHHHHHHHH-HHHHHHHHHHHHCCCcCCCCCHHHEEEeccccccccCCccccccccccCCCc
Confidence            9 6666654          23456677 89999999999998       4444                          5


Q ss_pred             EEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         111 KFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       111 kl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      ||+|||++.        ..||..|  +|||++.+.. ++.++||||+||++|++++|.+||.+.+..+....+.+..+.+
T Consensus       177 kl~Dfg~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  253 (339)
T 1z57_A          177 KVVDFGSATYDDEHHSTLVSTRHY--RAPEVILALG-WSQPCDVWSIGCILIEYYLGFTVFPTHDSKEHLAMMERILGPL  253 (339)
T ss_dssp             EECCCSSCEETTSCCCSSCSCGGG--CCHHHHTTSC-CCTHHHHHHHHHHHHHHHHSSCSCCCSCHHHHHHHHHHHHCSC
T ss_pred             eEeeCcccccCccccccccCCccc--cChHHhhCCC-CCcchhhHHHHHHHHHHHhCCCCCCCCChHHHHHHHHHHhCCC
Confidence            899999854        4678899  9999998765 9999999999999999999999999998888887777766544


Q ss_pred             C
Q psy7174         183 S  183 (188)
Q Consensus       183 ~  183 (188)
                      +
T Consensus       254 p  254 (339)
T 1z57_A          254 P  254 (339)
T ss_dssp             C
T ss_pred             C
Confidence            3

>1wak_A Serine/threonine-protein kinase SPRK1; SRPK, transferase, alternative splicing, ATP-binding, chromosome partition, differentiation, mRNA processing; 1.73A {Homo sapiens} PDB: 1wbp_A* 3beg_A* 2x7g_A*

Probab=99.93  E-value=8.7e-26  Score=181.52  Aligned_cols=171  Identities=18%  Similarity=0.223  Sum_probs=127.4

Q ss_pred             cccccc-cCCccc-ccccccc--chhhhhHHHHHHHHHHhCC--------CCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC--DVNVETQAKAEGKQDRRLD--------YANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~--~~~~~~~~~~E~~il~~l~--------h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+ .++... .+|+|..  .....+.+.+|+++++.++        |+||++++++|..    ...++...+++||
T Consensus        50 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~iv~~~~~~~~----~~~~~~~~~lv~e  125 (397)
T 1wak_A           50 FSTVWLSWDIQGKKFVAMKVVKSAEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKI----SGVNGTHICMVFE  125 (397)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHSCTTCGGGGGBCCEEEEEEE----EETTEEEEEEEEC
T ss_pred             CeeEEEEEecCCCeEEEEEEEecCCcchHHHHHHHHHHHHHhhcCCCCCCcceeeeeecceee----cCCCCceEEEEEe
Confidence            677887 222211 3444432  2344567889999999986        7889999998632    1124567899999


Q ss_pred             ccccccHHHH---------HHHHHHHHHHHHHHHHHHHhhc-C-------CCC---------------------------
Q psy7174          73 IFTKTTKARF---------YSHLRYLENQQILEGLQALKSS-M-------PAL---------------------------  108 (188)
Q Consensus        73 ~~~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~---------------------------  108 (188)
                      ++.++.+..+         ...+..++ .|++.||.|||++ +       |+|                           
T Consensus       126 ~~~~~l~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~givHrDikp~NIll~~~~~~~~~~~~~~~~~~~~~~~~  204 (397)
T 1wak_A          126 VLGHHLLKWIIKSNYQGLPLPCVKKII-QQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQRSGAPP  204 (397)
T ss_dssp             CCCCBHHHHHHHTTTSCCCHHHHHHHH-HHHHHHHHHHHHTTCEECCCCSGGGEEECCCHHHHHHHHHHHC---------
T ss_pred             ccCccHHHHHHhcccCCCCHHHHHHHH-HHHHHHHHHHHHhCCEecCCCCHHHeeEeccchhhhhhhhhhHHHhhcCCCC
Confidence            9966666554         34566777 8999999999998 7       322                           


Q ss_pred             -----------------------------eEEEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHH
Q psy7174         109 -----------------------------LKKFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGC  151 (188)
Q Consensus       109 -----------------------------ilkl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~  151 (188)
                                                   .+||+|||++.        ..||..|  +|||++.+.. ++.++|||||||
T Consensus       205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kl~DfG~a~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwslG~  281 (397)
T 1wak_A          205 PSGSAVSTAPATAGNFLVNPLEPKNAEKLKVKIADLGNACWVHKHFTEDIQTRQY--RSLEVLIGSG-YNTPADIWSTAC  281 (397)
T ss_dssp             ------------CCTTSCCTTSGGGGGGCCEEECCGGGCEETTBCSCSCCSCGGG--CCHHHHHTSC-CCTHHHHHHHHH
T ss_pred             CCCCccccCCcccccccccccccccccccceEeccccccccccccCccCCCCCcc--cCChhhcCCC-CCcHHHHHHHHH
Confidence                                         46899999854        4678999  9999998866 999999999999


Q ss_pred             HHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCC
Q psy7174         152 IICELLLKAPFLPGES------DLDQLTRIFQTLGTPS  183 (188)
Q Consensus       152 il~el~~g~~pf~~~~------~~~~~~~i~~~~~~p~  183 (188)
                      ++|+|++|++||.+.+      ....+..+.+..+.++
T Consensus       282 il~elltg~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p  319 (397)
T 1wak_A          282 MAFELATGDYLFEPHSGEEYTRDEDHIALIIELLGKVP  319 (397)
T ss_dssp             HHHHHHHSSCSCCCCCCSSSCHHHHHHHHHHHHHCSCC
T ss_pred             HHHHHhhCCCCCCCCcccccCchHHHHHHHHHhcCCCC
Confidence            9999999999997654      4566777777666554

>4hgt_A Casein kinase I isoform delta; CK1D, inhibitor, transferase-transferase inhibitor C; HET: 15G; 1.80A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 3uzp_A* 4hnf_A* 1cki_A 1ckj_A 4hni_A* 4hok_A

Probab=99.93  E-value=8.5e-26  Score=174.94  Aligned_cols=150  Identities=11%  Similarity=0.090  Sum_probs=115.0

Q ss_pred             cccccc-cCCcc-cccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++.. ..+++|.. .....+.+.+|+++++.++|++++..+..+.       ..+...+++||++ +++|..
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-------~~~~~~~lv~e~~-~~~L~~   93 (296)
T 4hgt_A           22 FGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG-------AEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEEC---CCCHHHHHHHHHHHTTSTTCCCEEEEE-------EETTEEEEEEECC-CCBHHH
T ss_pred             CeEEEEEEEcCCCceEEEEeecccccchHHHHHHHHHHHhcCCCCCCeeeeec-------CCCCceEEEEEcc-CCCHHH
Confidence            677887 32222 24455542 2344567899999999999988887777642       3456779999999 888877


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------------
Q psy7174          82 FY---------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------------  119 (188)
Q Consensus        82 ~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------------  119 (188)
                      +.         ..+..++ .|++.||.|||+++       |+||          +||+|||++.                
T Consensus        94 ~~~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~ivH~Dlkp~NIl~~~~~~~~~~kL~Dfg~a~~~~~~~~~~~~~~~~~  172 (296)
T 4hgt_A           94 LFNFCSRKFSLKTVLLLA-DQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN  172 (296)
T ss_dssp             HHHHTTSCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCS
T ss_pred             HHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeecCCCCHHHeeeeccCCCCeEEEecCccceeccCcccCccCCCCcc
Confidence            52         3466677 89999999999998       6666          5899999753                


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                        ..||..|  +|||.+.+.. ++.++||||+||++|++++|+.||.+.
T Consensus       173 ~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 4hgt_A          173 KNLTGTARY--ASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCCSCGGG--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             cccCCCccc--cchHHhcCCC-CCchhHHHHHHHHHHHHhcCCCCCccc
Confidence              3578889  9999998765 999999999999999999999999764

>4e5w_A Tyrosine-protein kinase JAK1; kinase domain, transferase-transferase inhibit complex; HET: PTR 0NT; 1.86A {Homo sapiens} PDB: 4e4l_A* 4e4n_A* 4ehz_A* 4ei4_A* 4fk6_A* 3eyg_A* 3eyh_A*

Probab=99.93  E-value=1.1e-25  Score=175.13  Aligned_cols=128  Identities=20%  Similarity=0.273  Sum_probs=104.9

Q ss_pred             hhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLRYLENQQILE   96 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~~~~~~qi~~   96 (188)
                      ...+.+.+|++++++++||||+++++++..      ......+++|||+.+++|..+.         ..+..++ .|++.
T Consensus        65 ~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~~~~-~~i~~  137 (302)
T 4e5w_A           65 NHIADLKKEIEILRNLYHENIVKYKGICTE------DGGNGIKLIMEFLPSGSLKEYLPKNKNKINLKQQLKYA-VQICK  137 (302)
T ss_dssp             CCHHHHHHHHHHHHTCCCTTBCCEEEEEEC---------CCEEEEEECCTTCBHHHHHHHHTTTCCHHHHHHHH-HHHHH
T ss_pred             hhHHHHHHHHHHHHhCCCCCeeeeeeEEec------CCCceEEEEEEeCCCCcHHHHHHhccccCCHHHHHHHH-HHHHH
Confidence            345778999999999999999999998632      2235679999999999998863         3455566 79999


Q ss_pred             HHHHHhhcC-------CCCe-------EEEecCCccc--------------ccccccccCCCCccccccCCCCchhHHHH
Q psy7174          97 GLQALKSSM-------PALL-------KKFVGIGIGR--------------HVCTLYCTRGAPELLFGARMYGVGIDMWA  148 (188)
Q Consensus        97 gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~~~y~~~aPe~~~~~~~~~~~~Diws  148 (188)
                      ||.|||+.+       |+||       +||+|||++.              ..+|..|  +|||++.+.. ++.++|+||
T Consensus       138 ~l~~lH~~~i~H~dikp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~~~~~Di~s  214 (302)
T 4e5w_A          138 GMDYLGSRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEYYTVKDDRDSPVFW--YAPECLMQSK-FYIASDVWS  214 (302)
T ss_dssp             HHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCCEEECCCCTTCCGGG--CCHHHHHHCE-EEHHHHHHH
T ss_pred             HHHHhhcCCcccCCCchheEEEcCCCCEEECcccccccccCCCcceeccCCCCCCccc--cCCeeecCCC-CCcchhHHH
Confidence            999999998       6666       5999999854              2345568  9999998765 889999999


Q ss_pred             HHHHHHHHHhCCCCC
Q psy7174         149 VGCIICELLLKAPFL  163 (188)
Q Consensus       149 lG~il~el~~g~~pf  163 (188)
                      +|+++|+|++|..|+
T Consensus       215 lG~il~~l~~g~~p~  229 (302)
T 4e5w_A          215 FGVTLHELLTYCDSD  229 (302)
T ss_dssp             HHHHHHHHHTTTCGG
T ss_pred             HHHHHHHHHHccCCC
Confidence            999999999998875

>3uzp_A CKI-delta, CKID, casein kinase I isoform delta; CK1D, inhibitor, PF670462, transferase-transferase I complex; HET: 0CK; 1.94A {Homo sapiens} PDB: 3uys_A* 3uyt_A* 1cki_A 1ckj_A

Probab=99.93  E-value=9.6e-26  Score=174.78  Aligned_cols=150  Identities=11%  Similarity=0.087  Sum_probs=115.1

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++... .+++|.. .....+++.+|+++++.++|++++..+..+.       ..+...++++||+ +++|..
T Consensus        22 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~e~~~l~~l~~~~~i~~~~~~~-------~~~~~~~lv~e~~-~~~L~~   93 (296)
T 3uzp_A           22 FGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG-------AEGDYNVMVMELL-GPSLED   93 (296)
T ss_dssp             TEEEEEEEETTTTEEEEEEEEESCSSCCHHHHHHHHHHHHTTSTTCCCEEEEE-------EETTEEEEEEECC-CCBHHH
T ss_pred             CeEEEEEEEcCCCcEEEEEEecCCcchhHHHHHHHHHHHhhcCCCCCcccccc-------CCCCceEEEEEec-CCCHHH
Confidence            677887 322222 4444442 2234467899999999999988777776542       3456779999999 888877


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------------
Q psy7174          82 FY---------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------------  119 (188)
Q Consensus        82 ~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------------  119 (188)
                      +.         ..+..++ .|++.||.|||+++       |+||          +||+|||++.                
T Consensus        94 ~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~ivH~dlkp~NIl~~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~~~~~  172 (296)
T 3uzp_A           94 LFNFCSRKFSLKTVLLLA-DQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYREN  172 (296)
T ss_dssp             HHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCS
T ss_pred             HHHhhccCCCHHHHHHHH-HHHHHHHHHHHhCCeeeCCCCHHHeEEecCCCCCeEEEeeCCCcccccccccccccccccc
Confidence            53         3456667 89999999999998       5555          5899999753                


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                        ..||..|  +|||.+.+.. ++.++||||+||++|+|++|+.||.+.
T Consensus       173 ~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~  218 (296)
T 3uzp_A          173 KNLTGTARY--ASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGL  218 (296)
T ss_dssp             CCCCSCTTT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSC
T ss_pred             ccccccccc--CChhhhcCCC-CCcchhhHHHHHHHHHHHhCCCCCCCc
Confidence              2567889  9999998765 899999999999999999999999763

>2vx3_A Dual specificity tyrosine-phosphorylation- regula kinase 1A; serine/threonine-protein kinase, minibrain homolog, nucleotide-binding, transferase; HET: PTR D15 P6G; 2.40A {Homo sapiens} PDB: 2wo6_A* 3anq_A* 3anr_A*

Probab=99.93  E-value=5.1e-26  Score=183.09  Aligned_cols=166  Identities=22%  Similarity=0.388  Sum_probs=127.6

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCC-CC-----CeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLD-YA-----NIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~-h~-----niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .    ++..++|.+++ .....+.+.+|+++++.++ |+     +|+++++++        ..+...+++||+
T Consensus        67 ~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~e~~~l~~l~~~~~~~~~~iv~~~~~~--------~~~~~~~lv~e~  137 (382)
T 2vx3_A           67 FGQVVKAYDRVEQEWVAIKIIKN-KKAFLNQAQIEVRLLELMNKHDTEMKYYIVHLKRHF--------MFRNHLCLVFEM  137 (382)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECS-SHHHHHHHHHHHHHHHHHHHCSSGGGGGBCCEEEEE--------EETTEEEEEEEC
T ss_pred             CEEEEEEEEcCCCcEEEEEEEec-cHHHHHHHHHHHHHHHHHHhcccccceeEEEeeeee--------ccCCceEEEEec
Confidence            677887 2    22333443332 2234566788999998886 55     489999876        345688999999


Q ss_pred             cccccHHHH----------HHHHHHHHHHHHHHHHHHHhh--cC-------CCCe---------EEEecCCccc------
Q psy7174          74 FTKTTKARF----------YSHLRYLENQQILEGLQALKS--SM-------PALL---------KKFVGIGIGR------  119 (188)
Q Consensus        74 ~~~~~l~~~----------~~~~~~~~~~qi~~gl~~lH~--~~-------~~~i---------lkl~dfg~~~------  119 (188)
                      +.+ ++..+          ...+..++ .|++.||.|||+  .+       |+||         +||+|||++.      
T Consensus       138 ~~~-~L~~~l~~~~~~~~~~~~~~~i~-~qi~~al~~lH~~~~~ivHrDlkp~NIll~~~~~~~~kL~DFG~a~~~~~~~  215 (382)
T 2vx3_A          138 LSY-NLYDLLRNTNFRGVSLNLTRKFA-QQMCTALLFLATPELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRI  215 (382)
T ss_dssp             CCC-BHHHHHHHTTTSCCCHHHHHHHH-HHHHHHHHHHTSTTTCEECCCCSGGGEEESSTTSCCEEECCCTTCEETTCCC
T ss_pred             CCC-CHHHHHhhcCcCCCCHHHHHHHH-HHHHHHHHHhccCCCCEEcCCCCcccEEEecCCCCcEEEEeccCceeccccc
Confidence            975 66554          23456677 899999999995  34       5555         5999999864      


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                        ..+|+.|  +|||++.+.. ++.++||||+||++|||++|++||.+.+..+.+.+|.+..+.|++
T Consensus       216 ~~~~~t~~y--~aPE~~~~~~-~~~~~DiwSlG~il~elltg~~pf~~~~~~~~~~~i~~~~~~~~~  279 (382)
T 2vx3_A          216 YQYIQSRFY--RSPEVLLGMP-YDLAIDMWSLGCILVEMHTGEPLFSGANEVDQMNKIVEVLGIPPA  279 (382)
T ss_dssp             CSSCSCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCSCCH
T ss_pred             ccccCCccc--cChHHHcCCC-CCcHHHHHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHhCCCCH
Confidence              4678899  9999998865 999999999999999999999999999999999999888776653

>2pml_X PFPK7, Ser/Thr protein kinase; phosphorylati transferase, transferase; HET: ANP; 2.60A {Plasmodium falciparum} PDB: 2pmn_X* 2pmo_X*

Probab=99.93  E-value=7.9e-26  Score=179.22  Aligned_cols=137  Identities=12%  Similarity=0.222  Sum_probs=113.2

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH----------------HHHHHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF----------------YSHLRYLENQ   92 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~----------------~~~~~~~~~~   92 (188)
                      +.+.+|++++++++||||+++++++        .++...+++|||+.+++|..+                ...+..++ .
T Consensus        88 ~~~~~E~~~l~~l~h~~i~~~~~~~--------~~~~~~~lv~e~~~~~~L~~~~~~~~~l~~~~~~~~~~~~~~~i~-~  158 (348)
T 2pml_X           88 DDFKNELQIITDIKNEYCLTCEGII--------TNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFIPIQVIKCII-K  158 (348)
T ss_dssp             HHHHHHHHHHTTCCCTTBCCCSEEE--------ESSSEEEEEEECCTTCBSSEESSSEESSCSSSCCCCCHHHHHHHH-H
T ss_pred             HHHHHHHHHHHhCCCCCcceEEEEE--------eeCCeEEEEEeccCCCcHHHHHHHhhhhhhccccCCCHHHHHHHH-H
Confidence            7889999999999999999999986        345688999999999887653                34566677 8


Q ss_pred             HHHHHHHHHhh-cC-------CCCe-------EEEecCCccc---------ccccccccCCCCccccccCCCCc-hhHHH
Q psy7174          93 QILEGLQALKS-SM-------PALL-------KKFVGIGIGR---------HVCTLYCTRGAPELLFGARMYGV-GIDMW  147 (188)
Q Consensus        93 qi~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~---------~~~~~~y~~~aPe~~~~~~~~~~-~~Diw  147 (188)
                      |++.||.|||+ .+       |+||       +||+|||++.         ..++..|  +|||++.+...++. ++|||
T Consensus       159 qi~~~l~~lH~~~~i~H~dl~p~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~~Di~  236 (348)
T 2pml_X          159 SVLNSFSYIHNEKNICHRDVKPSNILMDKNGRVKLSDFGESEYMVDKKIKGSRGTYEF--MPPEFFSNESSYNGAKVDIW  236 (348)
T ss_dssp             HHHHHHHHHHHTSCEECCCCCGGGEEECTTSCEEECCCTTCEECBTTEECSSCSCGGG--CCGGGGSSCCCEEHHHHHHH
T ss_pred             HHHHHHHHHhccCCEeecCCChHhEEEcCCCcEEEeccccccccccccccCCCCCcCc--cCchhhcCCCCCCcchhhHH
Confidence            99999999999 77       5565       5999999864         3578889  99999987633666 99999


Q ss_pred             HHHHHHHHHHhCCCCCCCCCh-HHHHHHHH
Q psy7174         148 AVGCIICELLLKAPFLPGESD-LDQLTRIF  176 (188)
Q Consensus       148 slG~il~el~~g~~pf~~~~~-~~~~~~i~  176 (188)
                      |+||++|+|++|..||.+.+. .+....+.
T Consensus       237 slG~il~~l~~g~~pf~~~~~~~~~~~~i~  266 (348)
T 2pml_X          237 SLGICLYVMFYNVVPFSLKISLVELFNNIR  266 (348)
T ss_dssp             HHHHHHHHHHHSSCSSCCSSCSHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCCCCCCCcHHHHHHHHh
Confidence            999999999999999988766 55555553

>2w1i_A JAK2; chromosomal rearrangement, nucleotide-binding, tyrosine-protein kinase, proto-oncogene, phosphoprotein, disease mutation, SH2 domain; HET: PTR L0I; 2.60A {Homo sapiens}

Probab=99.93  E-value=1.2e-25  Score=177.17  Aligned_cols=139  Identities=16%  Similarity=0.235  Sum_probs=109.0

Q ss_pred             cccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---------HHHH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---------SHLR   87 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---------~~~~   87 (188)
                      +|.+........+.+.+|++++++++||||+++++++..      .+....++++||+.+++|..+.         ..+.
T Consensus        75 vK~~~~~~~~~~~~~~~E~~~l~~l~h~~iv~~~~~~~~------~~~~~~~lv~e~~~~~~L~~~l~~~~~~~~~~~~~  148 (326)
T 2w1i_A           75 VKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYS------AGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLL  148 (326)
T ss_dssp             EEEESSCCSHHHHHHHHHHHHHHTCCCTTBCCEEEEECC----------CCEEEECCCTTCBHHHHHHHSTTSSCHHHHH
T ss_pred             EEEeccCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEEe------cCCCceEEEEECCCCCCHHHHHHhcccCCCHHHHH
Confidence            443333344556788999999999999999999998632      2345789999999999998763         3455


Q ss_pred             HHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc--------------cccccccCCCCccccccCC
Q psy7174          88 YLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH--------------VCTLYCTRGAPELLFGARM  139 (188)
Q Consensus        88 ~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~--------------~~~~~y~~~aPe~~~~~~~  139 (188)
                      .++ .|++.||.|||+.+       |+||       +||+|||++..              .++..|  +|||.+.+.. 
T Consensus       149 ~i~-~qi~~aL~~LH~~~ivH~dikp~NIli~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-  224 (326)
T 2w1i_A          149 QYT-SQICKGMEYLGTKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFW--YAPESLTESK-  224 (326)
T ss_dssp             HHH-HHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCSSCSEEECSSCCSCCGGG--CCHHHHHHCE-
T ss_pred             HHH-HHHHHHHHHHHhCCEeccCCCcceEEEcCCCcEEEecCcchhhccccccccccccCCCCceeE--ECchhhcCCC-
Confidence            566 79999999999998       6666       59999998642              234468  9999998765 


Q ss_pred             CCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         140 YGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       140 ~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      ++.++||||||+++|+|++|..|+..
T Consensus       225 ~~~~~Di~slG~il~el~tg~~~~~~  250 (326)
T 2w1i_A          225 FSVASDVWSFGVVLYELFTYIEKSKS  250 (326)
T ss_dssp             EEHHHHHHHHHHHHHHHHHTTCGGGS
T ss_pred             CCchhhHHHHHHHHHHHHhcCCCCCC
Confidence            89999999999999999999988753

>3qa8_A MGC80376 protein; kinase ubiquitin-like domain, phosphorylation, kinase domain ubiquitin-like domain, kinase, substrate binding; 3.60A {Xenopus laevis} PDB: 3qad_A* 3rzf_A*

Probab=99.93  E-value=4.2e-25  Score=188.21  Aligned_cols=155  Identities=17%  Similarity=0.199  Sum_probs=121.4

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.++.. .....+.+.+|++++++++||||+++++++...  .....+...++++||+.+++
T Consensus        27 fG~Vyla~~~~tg~~VAVKvi~~~~~~~~~~~~~~Ei~iL~~L~HpnIV~l~~v~~~~--~~~~~~~~~~LVmEy~~ggs  104 (676)
T 3qa8_A           27 FGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSAREVPDGL--QKLAPNDLPLLAMEYCEGGD  104 (676)
T ss_dssp             SSBCCCCCCTTTTCCEEECCCCSCCCHHHHHHHHHHHHHHHHCCBTTBCCEEECCTTT--CCCCTTSSCCCEEECCSSCB
T ss_pred             CeEEEEEEECCCCcEEEEEEecccCCHHHHHHHHHHHHHHHhCCCCCCCceeeeeccc--ccccCCCeEEEEEEeCCCCC
Confidence            678887 2    233344444432 445567789999999999999999999985321  11233667899999999999


Q ss_pred             HHHHH-----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------c
Q psy7174          79 KARFY-----------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------H  120 (188)
Q Consensus        79 l~~~~-----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~  120 (188)
                      |..+.           ..+..++ .|++.||.|||+.+       |+||          +||+|||++.          .
T Consensus       105 L~~~L~~~~~~~~lse~~i~~I~-~QLl~aL~yLHs~gIVHrDLKP~NILl~~~g~~~~vKL~DFG~a~~~~~~~~~~~~  183 (676)
T 3qa8_A          105 LRKYLNQFENCCGLKEGPIRTLL-SDISSALRYLHENRIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEF  183 (676)
T ss_dssp             HHHHHHSSSCTTCCCSSHHHHHH-HHHHHHHHHHHHTTBCCCCCCSTTEEEECCSSSCEEEECSCCCCCBTTSCCCCCCC
T ss_pred             HHHHHHhcccCCCCCHHHHHHHH-HHHHHHHHHHHHCCCccCCCCHHHeEeecCCCceeEEEcccccccccccccccccc
Confidence            98863           2356677 79999999999988       6666          5899999754          3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      .||..|  +|||.+.+.. ++.++||||+||++|++++|..||.+
T Consensus       184 ~gt~~Y--~APE~l~~~~-~s~ksDIwSLGviLyeLltG~~Pf~~  225 (676)
T 3qa8_A          184 VGTLQY--LAPELLEQKK-YTVTVDYWSFGTLAFECITGFRPFLP  225 (676)
T ss_dssp             CSCCTT--CSSCSSCCSC-CSTTHHHHHHHHHHHHHHSSCSSCCS
T ss_pred             cCCccc--CChHHhccCC-CCchhHHHHHHHHHHHHHHCCCCCCc
Confidence            578889  9999998765 99999999999999999999999854

>3p23_A Serine/threonine-protein kinase/endoribonuclease; kinase domain, kinase and RNAse function, ATP binding ssRNA dephosphorylated, hydrolase; HET: ADP; 2.70A {Homo sapiens}

Probab=99.93  E-value=8.7e-26  Score=184.79  Aligned_cols=139  Identities=19%  Similarity=0.210  Sum_probs=108.1

Q ss_pred             cccccccchhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHH---------HH
Q psy7174          17 NTPMARCDVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYS---------HL   86 (188)
Q Consensus        17 ~~~i~~~~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~---------~~   86 (188)
                      .+|+|+...+..+.+.+|+++|+.+ +||||+++++++        .++...+++||++.+ ++..+..         .+
T Consensus        50 ~vAvK~~~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~--------~~~~~~~lv~E~~~g-~L~~~l~~~~~~~~~~~~  120 (432)
T 3p23_A           50 DVAVKRILPECFSFADREVQLLRESDEHPNVIRYFCTE--------KDRQFQYIAIELCAA-TLQEYVEQKDFAHLGLEP  120 (432)
T ss_dssp             EEEEEEECTTTEEECHHHHHHHHHSCCCTTBCCEEEEE--------EETTEEEEEEECCSE-EHHHHHHSSSCCCCSSCH
T ss_pred             EEEEEEECHHHHHHHHHHHHHHHhccCCCCcCeEEEEE--------ecCCEEEEEEECCCC-CHHHHHHhcCCCccchhH
Confidence            4455554444455678999999999 799999999975        445678999999975 6666521         24


Q ss_pred             HHHHHHHHHHHHHHHhhcC-------CCCeE------------EEecCCccc--------------ccccccccCCCCcc
Q psy7174          87 RYLENQQILEGLQALKSSM-------PALLK------------KFVGIGIGR--------------HVCTLYCTRGAPEL  133 (188)
Q Consensus        87 ~~~~~~qi~~gl~~lH~~~-------~~~il------------kl~dfg~~~--------------~~~~~~y~~~aPe~  133 (188)
                      ..++ .|++.||.|||+.+       |+||+            ||+|||++.              ..||+.|  +|||+
T Consensus       121 ~~i~-~qi~~aL~~LH~~~ivHrDlKp~NIll~~~~~~~~~~~kL~DFG~a~~~~~~~~~~~~~~~~~gt~~y--~APE~  197 (432)
T 3p23_A          121 ITLL-QQTTSGLAHLHSLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW--IAPEM  197 (432)
T ss_dssp             HHHH-HHHHHHHHHHHHTTCCCCCCSTTSEEECCCBTTTBCCEEECCTTEEECC------------CCSCTTS--CCGGG
T ss_pred             HHHH-HHHHHHHHHHHHCcCEeCCCCHHHEEEecCCCCCceeEEEecccceeeccCCCcceeeccccCCCcCc--cChhh
Confidence            4566 79999999999998       77774            599999753              3478999  99999


Q ss_pred             ccc--cCCCCchhHHHHHHHHHHHHHh-CCCCCCCCC
Q psy7174         134 LFG--ARMYGVGIDMWAVGCIICELLL-KAPFLPGES  167 (188)
Q Consensus       134 ~~~--~~~~~~~~DiwslG~il~el~~-g~~pf~~~~  167 (188)
                      +.+  ...++.++||||+||++|+|++ |..||....
T Consensus       198 l~~~~~~~~t~~~DiwSlG~il~ellt~g~~pf~~~~  234 (432)
T 3p23_A          198 LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSL  234 (432)
T ss_dssp             TSCC---CCCTHHHHHHHHHHHHHHHTTSCBTTBSTT
T ss_pred             hhcccccCCCcHHHHHHHHHHHHHHHcCCCCCcchhh
Confidence            974  2237789999999999999999 899996543

>1zy4_A Serine/threonine-protein kinase GCN2; translation regulator, signal transduction, acid starvation, starvation stress response; 1.95A {Saccharomyces cerevisiae} PDB: 1zy5_A* 1zyd_A* 1zyc_A* 1zxe_A

Probab=99.93  E-value=3.6e-25  Score=171.64  Aligned_cols=150  Identities=20%  Similarity=0.239  Sum_probs=110.8

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccC-----CCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQ-----PTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~-----~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.+.. .....+.+.+|++++++++||||+++++++.....     .........++++||+
T Consensus        19 ~g~V~~~~~~~~~~~vaiK~~~~-~~~~~~~~~~E~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~   97 (303)
T 1zy4_A           19 FGQVVKARNALDSRYYAIKKIRH-TEEKLSTILSEVMLLASLNHQYVVRYYAAWLERRNFVKPMTAVKKKSTLFIQMEYC   97 (303)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEE-EHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEECCCCCC------CEEEEEEEEECC
T ss_pred             cEEEEEEEEcCCCeEEEEEEEec-cHHHHHHHHHHHHHHHhcCchHHHHHHHHHHhhcchhhhhcccccCCceEEEEecC
Confidence            678887 2    22333443322 33455778999999999999999999998643211     0112346779999999


Q ss_pred             ccccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc-----------
Q psy7174          75 TKTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH-----------  120 (188)
Q Consensus        75 ~~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~-----------  120 (188)
                      .+++|..+.         ..+..++ .|++.||.|||+++       |+|+       +||+|||++..           
T Consensus        98 ~~~~L~~~l~~~~~~~~~~~~~~i~-~qi~~~l~~LH~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~  176 (303)
T 1zy4_A           98 ENGTLYDLIHSENLNQQRDEYWRLF-RQILEALSYIHSQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLD  176 (303)
T ss_dssp             CSCBHHHHHHHSCGGGCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCCCCCSCTTC--------
T ss_pred             CCCCHHHhhhccccccchHHHHHHH-HHHHHHHHHHHhCCeecccCCHHhEEEcCCCCEEEeeCcchhhcccccchhccc
Confidence            999998863         3455566 89999999999998       5565       59999997542           


Q ss_pred             --------------cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh
Q psy7174         121 --------------VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL  158 (188)
Q Consensus       121 --------------~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~  158 (188)
                                    .|+..|  +|||++.+...++.++||||+||++|+|++
T Consensus       177 ~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~  226 (303)
T 1zy4_A          177 SQNLPGSSDNLTSAIGTAMY--VATEVLDGTGHYNEKIDMYSLGIIFFEMIY  226 (303)
T ss_dssp             -----------------CTT--SCHHHHTSCSCCCTHHHHHHHHHHHHHHHS
T ss_pred             cccccccccccccCCCcccc--cCcccccCCCCCcchhhHHHHHHHHHHHHh
Confidence                          367789  999999765458999999999999999997

>3g2f_A Bone morphogenetic protein receptor type-2; kinase, structural genomics, structural genomics consortium, ATP-binding, disease mutation; HET: ADP; 2.35A {Homo sapiens}

Probab=99.93  E-value=9.9e-26  Score=177.84  Aligned_cols=153  Identities=17%  Similarity=0.179  Sum_probs=108.8

Q ss_pred             cccccccCCccccccccccchhhhhHHHHHHHHH--HhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQD--RRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~~~~~~~~~~~E~~il--~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+.......+++|.......+.+.+|.+++  ..++||||+++++.+...   ........+++|||+.+|+|..+
T Consensus        26 ~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~---~~~~~~~~~lv~e~~~~g~L~~~  102 (336)
T 3g2f_A           26 YGAVYKGSLDERPVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDERV---TADGRMEYLLVMEYYPNGSLXKY  102 (336)
T ss_dssp             SEEEEEEEETTEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE---CTTSCEEEEEEECCCTTCBHHHH
T ss_pred             CeEEEEEEECCeEEEEEEeeccchhhHHHHHHHHHHHhccCcchhhheeccccc---ccCCCceEEEEEecCCCCcHHHH
Confidence            6778872111113444443334445555566554  458999999999754221   12334456899999999999886


Q ss_pred             H-------HHHHHHHHHHHHHHHHHHhhc---------C-------CCCe-------EEEecCCccc-------------
Q psy7174          83 Y-------SHLRYLENQQILEGLQALKSS---------M-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        83 ~-------~~~~~~~~~qi~~gl~~lH~~---------~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      .       ..+..++ .|++.||.|||+.         +       |+||       +||+|||++.             
T Consensus       103 l~~~~~~~~~~~~i~-~qi~~~L~~LH~~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kL~DFG~a~~~~~~~~~~~~~~  181 (336)
T 3g2f_A          103 LSLHTSDWVSSCRLA-HSVTRGLAYLHTELPRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEE  181 (336)
T ss_dssp             HHHCCBCHHHHHHHH-HHHHHHHHHHHCCBCCGGGCBCCEECSSCSGGGEEECTTSCEEECCCTTCEECSSSSCC-----
T ss_pred             HhhcccchhHHHHHH-HHHHHHHHHHHhhhccccccccceeecccccceEEEcCCCcEEEeeccceeecccccccCcccc
Confidence            3       3455566 7999999999998         6       6666       5999999863             


Q ss_pred             ------ccccccccCCCCcccccc------CCCCchhHHHHHHHHHHHHHhCCCCC
Q psy7174         120 ------HVCTLYCTRGAPELLFGA------RMYGVGIDMWAVGCIICELLLKAPFL  163 (188)
Q Consensus       120 ------~~~~~~y~~~aPe~~~~~------~~~~~~~DiwslG~il~el~~g~~pf  163 (188)
                            ..||..|  +|||++.+.      ..++.++|||||||++|||++|..||
T Consensus       182 ~~~~~~~~gt~~y--~aPE~~~~~~~~~~~~~~~~~~DiwslG~il~ell~g~~p~  235 (336)
T 3g2f_A          182 DNAAISEVGTIRY--MAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDL  235 (336)
T ss_dssp             ----CCTTSCGGG--CCHHHHTTCCCGGGHHHHHHHHHHHHHHHHHHHHHTTBGGG
T ss_pred             ccccccCCCccce--eCchhhcCCcccccccccccccchHHHHHHHHHHHhcCCcC
Confidence                  2478899  999998752      22667899999999999999996554

>2a19_B Interferon-induced, double-stranded RNA-activated kinase; transferase, protein biosynthesis, protein synthesis transferase complex; HET: TPO ANP; 2.50A {Homo sapiens} PDB: 2a1a_B*

Probab=99.93  E-value=1.8e-25  Score=172.10  Aligned_cols=155  Identities=23%  Similarity=0.238  Sum_probs=114.7

Q ss_pred             cccccc-cCCc-cccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccC--------CCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQ--------PTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~--------~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ ..+. ...+++|.... ..+.+.+|++++++++||||+++++++.....        .........+++|||+
T Consensus        24 ~g~V~~~~~~~~~~~vavK~~~~-~~~~~~~e~~~l~~l~h~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lv~e~~  102 (284)
T 2a19_B           24 FGQVFKAKHRIDGKTYVIKRVKY-NNEKAEREVKALAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFC  102 (284)
T ss_dssp             SCCEEEEEETTTCCEEEEEEEEC-CSGGGHHHHHHHHHCCCTTBCCEEEEEEEEEEC---------CCEEEEEEEEECCC
T ss_pred             ceEEEEEEEcCCCeEEEEEEecc-ccHHHHHHHHHHHhCCCCCEEEEeeeEeccccCcccccccccccCcceEEEEEecc
Confidence            678887 2221 12333443321 23567899999999999999999997632100        0011234579999999


Q ss_pred             ccccHHHHH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------c
Q psy7174          75 TKTTKARFY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------H  120 (188)
Q Consensus        75 ~~~~l~~~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~  120 (188)
                      .+++|..+.          ..+..++ .|++.||.|||+.+       |+||       +||+|||++.          .
T Consensus       103 ~~~~L~~~l~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  181 (284)
T 2a19_B          103 DKGTLEQWIEKRRGEKLDKVLALELF-EQITKGVDYIHSKKLINRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRTRS  181 (284)
T ss_dssp             CSCBHHHHHHHGGGSCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEESSCCSCCCCC
T ss_pred             CCCCHHHHHhhccCCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeccCCHHHEEEcCCCCEEECcchhheecccccccccc
Confidence            999998863          2355566 79999999999998       6666       5999999754          3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                      .++..|  +|||.+.+.. ++.++|+||+|+++|+|++|..|+.
T Consensus       182 ~~~~~y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~~~~~~~  222 (284)
T 2a19_B          182 KGTLRY--MSPEQISSQD-YGKEVDLYALGLILAELLHVCDTAF  222 (284)
T ss_dssp             CSCCTT--SCHHHHHCSC-CCTHHHHHHHHHHHHHHHSCCSSHH
T ss_pred             CCcccc--cChhhhccCC-CcchhhhHHHHHHHHHHHhcCCcch
Confidence            477889  9999998765 8999999999999999999988773

>3fme_A Dual specificity mitogen-activated protein kinase; active mutant, structural genomics consortium, SCG, binding, nucleotide-binding, phosphoprotein; HET: STU; 2.26A {Homo sapiens} PDB: 3enm_A

Probab=99.93  E-value=4.7e-25  Score=170.40  Aligned_cols=149  Identities=15%  Similarity=0.195  Sum_probs=104.8

Q ss_pred             cccccc-c----CCcccccccccc-chhh-hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNV-ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~-~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.++.. .... .+.+.++...++.++||||+++++++        .++...++++||+.+ 
T Consensus        20 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~iv~~~~~~--------~~~~~~~lv~e~~~~-   90 (290)
T 3fme_A           20 YGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYGAL--------FREGDVWICMELMDT-   90 (290)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEC---CHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSSEEEEEECCSE-
T ss_pred             CeEEEEEEecCCCeEEEEEEeecccCcHHHHHHHHHHHHHHHhCCCCeEEEEeeee--------eccCCEEEEEehhcc-
Confidence            677887 2    223334444332 2222 23344455567889999999999986        346678999999986 


Q ss_pred             cHHHH------------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc----------c
Q psy7174          78 TKARF------------YSHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR----------H  120 (188)
Q Consensus        78 ~l~~~------------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~----------~  120 (188)
                      ++..+            +..+..++ .|++.||.|||++ +       |+|+       +||+|||++.          .
T Consensus        91 ~l~~~l~~~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~Dfg~~~~~~~~~~~~~~  169 (290)
T 3fme_A           91 SLDKFYKQVIDKGQTIPEDILGKIA-VSIVKALEHLHSKLSVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID  169 (290)
T ss_dssp             EHHHHHHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHHSCCCCCCCSGGGCEECTTCCEEBCCC---------------
T ss_pred             chHHHHHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHhhcCCeecCCCCHHHEEECCCCCEEEeecCCccccccccccccc
Confidence            54332            23455677 8999999999998 7       5666       5999999854          3


Q ss_pred             cccccccCCCCcccc---ccCCCCchhHHHHHHHHHHHHHhCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLF---GARMYGVGIDMWAVGCIICELLLKAPFLPG  165 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~---~~~~~~~~~DiwslG~il~el~~g~~pf~~  165 (188)
                      .||..|  +|||++.   ....++.++||||+||++|++++|+.||.+
T Consensus       170 ~~t~~y--~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~p~~~  215 (290)
T 3fme_A          170 AGCKPY--MAPERINPELNQKGYSVKSDIWSLGITMIELAILRFPYDS  215 (290)
T ss_dssp             CCCCCC--SCHHHHSCCTTC--CCHHHHHHHHHHHHHHHHHTSCSSCC
T ss_pred             CCCccc--cChhhcChhhcCcCCCcHHHHHHHHHHHHHHHHCCCCccc
Confidence            578899  9999972   233489999999999999999999999976

>3mdy_A Bone morphogenetic protein receptor type-1B; complex (isomerase-protein kinase), receptor serine/threonin structural genomics consortium, SGC; HET: LDN; 2.05A {Homo sapiens} SCOP: d.144.1.7

Probab=99.93  E-value=2.9e-25  Score=174.96  Aligned_cols=152  Identities=14%  Similarity=0.129  Sum_probs=111.8

Q ss_pred             cccccc-cCCccccccccccchhhhhHHHHHHHHHHhC--CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWSPNTPMARCDVNVETQAKAEGKQDRRL--DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l--~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ ..+ ...+++|...........+|.+++..+  +||||+++++++...    .......+++|||+.+++|..
T Consensus        50 ~g~V~~~~~~-~~~vavK~~~~~~~~~~~~e~~~~~~~~~~h~~i~~~~~~~~~~----~~~~~~~~lv~e~~~~g~L~~  124 (337)
T 3mdy_A           50 YGEVWMGKWR-GEKVAVKVFFTTEEASWFRETEIYQTVLMRHENILGFIAADIKG----TGSWTQLYLITDYHENGSLYD  124 (337)
T ss_dssp             TEEEEEEEET-TEEEEEEEEEGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEES----CGGGCEEEEEECCCTTCBHHH
T ss_pred             CeEEEEEEEC-CceEEEEEEeccccchhhhHHHHHHHHhhcCCCeeeEEEEEccC----CCCCCceEEEEeccCCCcHHH
Confidence            677887 211 224445544334455666777777655  899999999986331    112256899999999999988


Q ss_pred             HH-------HHHHHHHHHHHHHHHHHHhhc--------C-------CCCe-------EEEecCCccc-------------
Q psy7174          82 FY-------SHLRYLENQQILEGLQALKSS--------M-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        82 ~~-------~~~~~~~~~qi~~gl~~lH~~--------~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      +.       ..+..++ .|++.||.|||+.        +       |+||       +||+|||++.             
T Consensus       125 ~l~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~~~~~~~~ivH~Dikp~Nill~~~~~~kl~Dfg~a~~~~~~~~~~~~~~  203 (337)
T 3mdy_A          125 YLKSTTLDAKSMLKLA-YSSVSGLCHLHTEIFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPP  203 (337)
T ss_dssp             HHHHCCBCHHHHHHHH-HHHHHHHHHHHSCBCSTTCBCCEECSCCCGGGEEECTTSCEEECCCTTCEECC---------C
T ss_pred             HhhccCCCHHHHHHHH-HHHHHHHHHHHHhhhhhccCCCEEecccchHHEEECCCCCEEEEeCCCceeeccccccccCCC
Confidence            63       4456666 7999999999988        5       6666       5999999853             


Q ss_pred             --ccccccccCCCCccccccCCCCc------hhHHHHHHHHHHHHHhC----------CCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGV------GIDMWAVGCIICELLLK----------APFLPG  165 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~------~~DiwslG~il~el~~g----------~~pf~~  165 (188)
                        ..||..|  +|||++.+.. ++.      ++|||||||++|||++|          +.||..
T Consensus       204 ~~~~gt~~y--~aPE~~~~~~-~~~~~~~~~~~DiwslG~il~el~tg~~~~~~~~~~~~p~~~  264 (337)
T 3mdy_A          204 NTRVGTKRY--MPPEVLDESL-NRNHFQSYIMADMYSFGLILWEVARRCVSGGIVEEYQLPYHD  264 (337)
T ss_dssp             CSSCSCGGG--CCHHHHTTCC-CTTCTHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTT
T ss_pred             CCCccCcce--eChhhccccc-CCccccCccccchHHHHHHHHHHHhccCcccccccccccHhh
Confidence              3578899  9999997654 343      49999999999999999          677754

>2eu9_A Dual specificity protein kinase CLK3; kinase domain, transferase; 1.53A {Homo sapiens} PDB: 2wu6_A* 2wu7_A* 3raw_A* 2exe_A 3nr9_A*

Probab=99.93  E-value=3.3e-25  Score=175.60  Aligned_cols=166  Identities=16%  Similarity=0.206  Sum_probs=127.4

Q ss_pred             cccccc-cC-----CccccccccccchhhhhHHHHHHHHHHhCCCCC------eeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-QS-----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYAN------IIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~~-----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~n------iv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+ ..     +..++|.+++ .....+.+.+|++++++++|++      ++.+++++        ......+++||
T Consensus        32 ~g~V~~~~~~~~~~~~vavK~~~~-~~~~~~~~~~E~~~l~~l~~~~~~~~~~~~~~~~~~--------~~~~~~~lv~e  102 (355)
T 2eu9_A           32 FGKVVECLDHARGKSQVALKIIRN-VGKYREAARLEINVLKKIKEKDKENKFLCVLMSDWF--------NFHGHMCIAFE  102 (355)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEECS-CHHHHHHHHHHHHHHHHHHHHCTTSCSCBCCEEEEE--------EETTEEEEEEE
T ss_pred             CeEEEEEEecCCCceEEEEEEEcc-cccchhHHHHHHHHHHHHhhcCCCCceeEEEeeeee--------eeCCeEEEEEe
Confidence            677886 21     1233443332 2345567889999999998766      88888875        34567899999


Q ss_pred             ccccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------------------------E
Q psy7174          73 IFTKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL--------------------------K  110 (188)
Q Consensus        73 ~~~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------------------------l  110 (188)
                      ++.++.+..+         ...+..++ .|++.||.|||+++       |+||                          +
T Consensus       103 ~~~~~l~~~l~~~~~~~~~~~~~~~i~-~qi~~~L~~lH~~~ivH~Dlkp~NIll~~~~~~~~~~~~~~~~~~~~~~~~~  181 (355)
T 2eu9_A          103 LLGKNTFEFLKENNFQPYPLPHVRHMA-YQLCHALRFLHENQLTHTDLKPENILFVNSEFETLYNEHKSCEEKSVKNTSI  181 (355)
T ss_dssp             CCCCBHHHHHHHTTTCCCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCCGGGEEESCCCEEEEECCC-CCCEEEESCCCE
T ss_pred             ccCCChHHHHHhccCCCCCHHHHHHHH-HHHHHHHHHHHHCCcccCCCCHHHEEEecccccccccccccccccccCCCcE
Confidence            9966655543         24466677 89999999999998       5554                          4


Q ss_pred             EEecCCccc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         111 KFVGIGIGR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       111 kl~dfg~~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      ||+|||++.        ..||..|  +|||++.+.. ++.++||||+||++|+|++|.+||.+.+..+.+..+....+.+
T Consensus       182 kl~Dfg~~~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~  258 (355)
T 2eu9_A          182 RVADFGSATFDHEHHTTIVATRHY--RPPEVILELG-WAQPCDVWSIGCILFEYYRGFTLFQTHENREHLVMMEKILGPI  258 (355)
T ss_dssp             EECCCTTCEETTSCCCSSCSCGGG--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCC
T ss_pred             EEeecCccccccccccCCcCCCcc--cCCeeeecCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHHHcCCC
Confidence            899999864        4678899  9999998765 9999999999999999999999999998888888887776654


Q ss_pred             C
Q psy7174         183 S  183 (188)
Q Consensus       183 ~  183 (188)
                      +
T Consensus       259 p  259 (355)
T 2eu9_A          259 P  259 (355)
T ss_dssp             C
T ss_pred             c
Confidence            4

>3cek_A Dual specificity protein kinase TTK; HMPS1, PYT, ESK, phosphotyros picked threonine kinase, SGC, structural genomics consortiu binding; HET: 7PE; 2.30A {Homo sapiens} PDB: 3gfw_A* 3h9f_A* 2x9e_A* 3hmp_A* 3hmn_A* 3hmo_A*

Probab=99.92  E-value=8.7e-25  Score=171.09  Aligned_cols=151  Identities=17%  Similarity=0.225  Sum_probs=114.3

Q ss_pred             cccccc-cC---Cccccccccc--cchhhhhHHHHHHHHHHhCC--CCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QS---KWSPNTPMAR--CDVNVETQAKAEGKQDRRLD--YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~---~~~~~~~i~~--~~~~~~~~~~~E~~il~~l~--h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .+   +..++|.+..  ......+.+.+|++++++++  ||||+++++++        .++...+++|| +.+
T Consensus        41 ~g~Vy~~~~~~~~~vavK~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~iv~~~~~~--------~~~~~~~lv~e-~~~  111 (313)
T 3cek_A           41 SSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLYDYE--------ITDQYIYMVME-CGN  111 (313)
T ss_dssp             SEEEEEEECTTCCEEEEEEEECSSCCHHHHHHHHHHHHHHHHHGGGCTTBCCEEEEE--------ECSSEEEEEEC-CCS
T ss_pred             CEEEEEEEcCCCcEEEEEEeccccccccchHHHHHHHHHHHhccccCCceEEEEEEe--------ecCCEEEEEEe-cCC
Confidence            677887 22   2223443332  23345577899999999997  59999999975        34567899999 667


Q ss_pred             ccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc-------------ccc
Q psy7174          77 TTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR-------------HVC  122 (188)
Q Consensus        77 ~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~-------------~~~  122 (188)
                      ++|..+.        ..+..++ .|++.||.|||+.+       |+||      +||+|||++.             ..|
T Consensus       112 ~~L~~~l~~~~~~~~~~~~~i~-~qi~~aL~~LH~~~ivH~dlkp~NIl~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~~g  190 (313)
T 3cek_A          112 IDLNSWLKKKKSIDPWERKSYW-KNMLEAVHTIHQHGIVHSDLKPANFLIVDGMLKLIDFGIANQMQPDTTSVVKDSQVG  190 (313)
T ss_dssp             EEHHHHHHHCSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEEETTEEEECCCSSSCC--------------C
T ss_pred             CcHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCceecCCCcccEEEECCeEEEeeccccccccCccccccccCCCC
Confidence            7887652        3456666 89999999999998       6666      5999999854             246


Q ss_pred             cccccCCCCcccccc----------CCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         123 TLYCTRGAPELLFGA----------RMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~----------~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      +..|  +|||.+.+.          ..++.++|||||||++|+|++|+.||.+..
T Consensus       191 t~~y--~aPE~~~~~~~~~~~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~  243 (313)
T 3cek_A          191 TVNY--MPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQII  243 (313)
T ss_dssp             CGGG--CCHHHHTTCC----------CCCHHHHHHHHHHHHHHHHHSSCTTTTCC
T ss_pred             CCCc--CCHHHHhhcccccccccccccCCchHHHHHHHHHHHHHHhCCCchhhHH
Confidence            8889  999998651          238899999999999999999999997643

>1q8y_A SR protein kinase; transferase; HET: ADP ADE; 2.05A {Saccharomyces cerevisiae} SCOP: d.144.1.7 PDB: 1q8z_A 1q97_A* 1q99_A* 1how_A 2jd5_A

Probab=99.92  E-value=1.7e-25  Score=178.75  Aligned_cols=170  Identities=21%  Similarity=0.315  Sum_probs=123.9

Q ss_pred             cccccc-cCCccc-ccccccc--chhhhhHHHHHHHHHHhCC-----------CCCeeEEeeecccccCCCCCCCCccEE
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC--DVNVETQAKAEGKQDRRLD-----------YANIIQYLSLPVETLQPTTLSTSSDYI   69 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~--~~~~~~~~~~E~~il~~l~-----------h~niv~~~~~~~~~~~~~~~~~~~~~i   69 (188)
                      ||.||+ .++... .+++|..  .....+.+.+|++++++++           ||||+++++++...    ..+....++
T Consensus        32 ~g~V~~~~~~~~~~~vaiK~~~~~~~~~~~~~~e~~~l~~l~~~~~~~~~~~~~~~i~~~~~~~~~~----~~~~~~~~l  107 (373)
T 1q8y_A           32 FSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHK----GPNGVHVVM  107 (373)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEEE----ETTEEEEEE
T ss_pred             CeEEEEEEecCCCcEEEEEEecCCccchhhhhHHHHHHHHhhcccccchhccccchHHHHHHHhhcc----CCCCceEEE
Confidence            677887 222221 3444432  2334567889999999887           89999999986331    123347799


Q ss_pred             EEeccccccHHHHH----------HHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------------EEEecCCcc
Q psy7174          70 VVKIFTKTTKARFY----------SHLRYLENQQILEGLQALKSS-M-------PALL-------------KKFVGIGIG  118 (188)
Q Consensus        70 v~e~~~~~~l~~~~----------~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------------lkl~dfg~~  118 (188)
                      ++|++ ++++..+.          ..+..++ .|++.||.|||++ +       |+||             +||+|||++
T Consensus       108 v~e~~-~~~L~~~~~~~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~~ivH~Dikp~NIll~~~~~~~~~~~~kl~Dfg~a  185 (373)
T 1q8y_A          108 VFEVL-GENLLALIKKYEHRGIPLIYVKQIS-KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGNA  185 (373)
T ss_dssp             EECCC-CEEHHHHHHHTTTSCCCHHHHHHHH-HHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTTC
T ss_pred             EEecC-CCCHHHHHHHhhccCCcHHHHHHHH-HHHHHHHHHHHhcCCEEecCCChHHeEEeccCCCcCcceEEEcccccc
Confidence            99999 77776652          3456667 8999999999998 7       5555             489999985


Q ss_pred             c--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCC
Q psy7174         119 R--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTPS  183 (188)
Q Consensus       119 ~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~p~  183 (188)
                      .        ..+|..|  +|||++.+.. ++.++|||||||++|+|++|+.||.+.+      ....+..+.+.++.++
T Consensus       186 ~~~~~~~~~~~~t~~y--~aPE~~~~~~-~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~~~p  261 (373)
T 1q8y_A          186 CWYDEHYTNSIQTREY--RSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP  261 (373)
T ss_dssp             EETTBCCCSCCSCGGG--CCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC
T ss_pred             cccCCCCCCCCCCccc--cCcHHHhCCC-CCchHhHHHHHHHHHHHHhCCCCCCCCcccccCChHHHHHHHHHhcCCCC
Confidence            4        4678899  9999998865 8999999999999999999999998654      4556677777666554

>2jii_A Serine/threonine-protein kinase VRK3 molecule: VA related kinase 3; transferase, pseudo kinase domain, vaccinia related kinase, ATP-binding; 2.00A {Homo sapiens}

Probab=99.92  E-value=1.1e-25  Score=179.12  Aligned_cols=134  Identities=12%  Similarity=0.030  Sum_probs=104.7

Q ss_pred             hHHHHHHHHHHhCCCCCeeEEeeecccccC--------CCCCCCCccEEEEeccccccHHHHH----------HHHHHHH
Q psy7174          29 TQAKAEGKQDRRLDYANIIQYLSLPVETLQ--------PTTLSTSSDYIVVKIFTKTTKARFY----------SHLRYLE   90 (188)
Q Consensus        29 ~~~~~E~~il~~l~h~niv~~~~~~~~~~~--------~~~~~~~~~~iv~e~~~~~~l~~~~----------~~~~~~~   90 (188)
                      +.+.+|++++++++||||+++++.+.....        .....+...+++|||+ +++|..+.          ..+..++
T Consensus        87 ~~~~~E~~~l~~l~h~niv~~~~~~~~~~~~~i~~~~~~~~~~~~~~~lv~e~~-~~~L~~~l~~~~~~~l~~~~~~~i~  165 (352)
T 2jii_A           87 GRLFNEQNFFQRAAKPLQVNKWKKLYSTPLLAIPTCMGFGVHQDKYRFLVLPSL-GRSLQSALDVSPKHVLSERSVLQVA  165 (352)
T ss_dssp             STHHHHHHHHHHHCCHHHHHHHHHHTTCTTCSCCCCCEEEEETTTEEEEEEECC-CEEHHHHHHHSGGGCCCHHHHHHHH
T ss_pred             chHHHHHHHHHHhcccchhhhhhhhccCCccCccchhhccccCCcEEEEEecCC-CcCHHHHHHhCCcCCCCHHHHHHHH
Confidence            678999999999999999985432110000        0011256789999999 99998763          3456666


Q ss_pred             HHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc------------------ccccccccCCCCccccc
Q psy7174          91 NQQILEGLQALKSSM-------PALL---------KKFVGIGIGR------------------HVCTLYCTRGAPELLFG  136 (188)
Q Consensus        91 ~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~  136 (188)
                       .|++.||.|||+++       |+||         +||+|||++.                  ..||..|  +|||++.+
T Consensus       166 -~qi~~~L~~LH~~~ivH~Dikp~NIl~~~~~~~~~kl~Dfg~a~~~~~~~~~~~~~~~~~~~~~gt~~y--~aPE~~~~  242 (352)
T 2jii_A          166 -CRLLDALEFLHENEYVHGNVTAENIFVDPEDQSQVTLAGYGFAFRYCPSGKHVAYVEGSRSPHEGDLEF--ISMDLHKG  242 (352)
T ss_dssp             -HHHHHHHHHHHHTTCBCSCCCGGGEEEETTEEEEEEECCGGGCBCSSGGGCCCCCCTTSSCTTCSCTTT--CCHHHHTT
T ss_pred             -HHHHHHHHHHHhCCccCCCCCHHHEEEcCCCCceEEEecCcceeeccCCCccccccccccccccCCccc--cCHHHHcc
Confidence             89999999999998       4444         6999999863                  2578899  99999987


Q ss_pred             cCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         137 ARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       137 ~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      .. ++.++|||||||++|+|++|+.||.+..
T Consensus       243 ~~-~~~~~Di~slG~il~el~~g~~pf~~~~  272 (352)
T 2jii_A          243 CG-PSRRSDLQSLGYCMLKWLYGFLPWTNCL  272 (352)
T ss_dssp             CC-CCHHHHHHHHHHHHHHHHHSCCTTGGGT
T ss_pred             CC-CCchhhHHHHHHHHHHHHhCCCCcccCC
Confidence            65 8999999999999999999999997653

>2iwi_A Serine/threonine-protein kinase PIM-2; nucleotide-binding, cancer, leukemia, transferase, ATP-binding, proto- oncogene, phosphorylation; HET: HB1; 2.80A {Homo sapiens}

Probab=99.92  E-value=3.7e-25  Score=173.02  Aligned_cols=173  Identities=12%  Similarity=0.139  Sum_probs=121.6

Q ss_pred             cccccc-c----CCccccccccccch------hhhhHHHHHHHHHHhC----CCCCeeEEeeecccccCCCCCCCCccEE
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDV------NVETQAKAEGKQDRRL----DYANIIQYLSLPVETLQPTTLSTSSDYI   69 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~------~~~~~~~~E~~il~~l----~h~niv~~~~~~~~~~~~~~~~~~~~~i   69 (188)
                      ||.||+ .    ++..++|.+.+...      .....+.+|+++++++    +||||+++++++        ..+...++
T Consensus        44 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~e~~~l~~l~~~~~h~~i~~~~~~~--------~~~~~~~~  115 (312)
T 2iwi_A           44 FGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVTCPLEVALLWKVGAGGGHPGVIRLLDWF--------ETQEGFML  115 (312)
T ss_dssp             TEEEEEEECTTTCCEEEEEECCSTTTC--------CCCCHHHHHHHHHHSSCCCSSBCCEEEEC-------------CEE
T ss_pred             CEEEEEEEEccCCeEEEEEEEecccccccccchhhHHHHHHHHHHHhhcccCCCCCeeeEEEEE--------ecCCeEEE
Confidence            677887 2    22333444433211      2334566899999998    899999999985        34567899


Q ss_pred             EEec-cccccHHHHH--------HHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc------
Q psy7174          70 VVKI-FTKTTKARFY--------SHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR------  119 (188)
Q Consensus        70 v~e~-~~~~~l~~~~--------~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~------  119 (188)
                      ++|+ +.+++|..+.        ..+..++ .|++.||.|||+.+       |+||        +||+|||++.      
T Consensus       116 v~e~~~~~~~L~~~l~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~kl~dfg~~~~~~~~~  194 (312)
T 2iwi_A          116 VLERPLPAQDLFDYITEKGPLGEGPSRCFF-GQVVAAIQHCHSRGVVHRDIKDENILIDLRRGCAKLIDFGSGALLHDEP  194 (312)
T ss_dssp             EEECCSSEEEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHHTEECCCCSGGGEEEETTTTEEEECCCSSCEECCSSC
T ss_pred             EEEecCCCCCHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecCCChhhEEEeCCCCeEEEEEcchhhhcccCc
Confidence            9999 7889988763        3455666 89999999999998       4454        6999999854      


Q ss_pred             ---ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------------hHHHHHHHHhhcCCCCC
Q psy7174         120 ---HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------------DLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------------~~~~~~~i~~~~~~p~~  184 (188)
                         ..|+..|  +|||++.+....+.++||||+||++|++++|+.||.+..            -...+..+++.+..+.|
T Consensus       195 ~~~~~~~~~y--~aPE~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~~p  272 (312)
T 2iwi_A          195 YTDFDGTRVY--SPPEWISRHQYHALPATVWSLGILLYDMVCGDIPFERDQEILEAELHFPAHVSPDCCALIRRCLAPKP  272 (312)
T ss_dssp             BCCCCSCTTT--SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHTCCCCCTTSCHHHHHHHHHHTCSST
T ss_pred             ccccCCcccc--cCceeeecCCCCCccchHHHHHHHHHHHHHCCCCCCChHHHhhhccCCcccCCHHHHHHHHHHccCCh
Confidence               3578889  999998765534568999999999999999999996421            12334455555556666


Q ss_pred             CCCC
Q psy7174         185 DTWP  188 (188)
Q Consensus       185 ~~~p  188 (188)
                      +..|
T Consensus       273 ~~Rp  276 (312)
T 2iwi_A          273 SSRP  276 (312)
T ss_dssp             TTSC
T ss_pred             hhCc
Confidence            6554

>3aln_A Dual specificity mitogen-activated protein kinase; protein AMP-PNP complex, transferase; HET: ANP; 2.30A {Homo sapiens} PDB: 3alo_A*

Probab=99.92  E-value=6.6e-25  Score=172.75  Aligned_cols=150  Identities=18%  Similarity=0.205  Sum_probs=98.6

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHH-HHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGK-QDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+... ......++.+|+. +++.++||||+++++++        .++...++++||+.+ 
T Consensus        35 ~g~Vy~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~e~~~~~~~~~h~niv~~~~~~--------~~~~~~~lv~e~~~~-  105 (327)
T 3aln_A           35 YGSVNKMVHKPSGQIMAVKRIRSTVDEKEQKQLLMDLDVVMRSSDCPYIVQFYGAL--------FREGDCWICMELMST-  105 (327)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEECCCCHHHHHHHHHHHHHHHSSCCCTTBCCEEEEE--------ECSSEEEEEECCCSE-
T ss_pred             CEEEEEEEEcCCCCEEEEEEeecccCchHHHHHHHHHHHHHHcCCCCcEeeeeeEE--------EeCCceEEEEeecCC-
Confidence            678887 2    223334444332 2334455666766 67778999999999986        345678999999987 


Q ss_pred             cHHHH-------------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc----------
Q psy7174          78 TKARF-------------YSHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        78 ~l~~~-------------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      ++..+             ...+..++ .|++.||.|||+. +       |+||       +||+|||++.          
T Consensus       106 ~l~~~~~~~~~~~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~ivH~dlkp~NIll~~~~~~kl~Dfg~~~~~~~~~~~~~  184 (327)
T 3aln_A          106 SFDKFYKYVYSVLDDVIPEEILGKIT-LATVKALNHLKENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTR  184 (327)
T ss_dssp             EHHHHHHHHHHTTCCCCCHHHHHHHH-HHHHHHHHHHHHHHSCCCSCCCGGGEEEETTTEEEECCCSSSCC---------
T ss_pred             ChHHHHHHHHhhhcccCcHHHHHHHH-HHHHHHHHHHhccCCEeECCCCHHHEEEcCCCCEEEccCCCceeccccccccc
Confidence            44332             23455666 7999999999998 7       5566       6999999864          


Q ss_pred             ccccccccCCCCcccc---ccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLF---GARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~---~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                      ..||..|  +|||++.   ....++.++|||||||++|+|++|+.||.+.
T Consensus       185 ~~gt~~y--~aPE~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~  232 (327)
T 3aln_A          185 DAGCRPY--MAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW  232 (327)
T ss_dssp             -----------------------CCSHHHHHHHHHHHHHHHHSCCCSSCC
T ss_pred             CCCCccc--cCceeeccccCcCCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence            2578889  9999983   1233899999999999999999999999764

>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}

Probab=99.92  E-value=2.5e-25  Score=191.15  Aligned_cols=176  Identities=19%  Similarity=0.160  Sum_probs=127.3

Q ss_pred             cccccc-cC-----Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-QS-----KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~~-----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ ..     +.+++|.+... .....+.+.+|++++++++||||++++++|....   .......|+||||+.++
T Consensus        93 ~g~Vy~a~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~hp~iv~~~~~~~~~~---~~~~~~~~lv~E~~~g~  169 (681)
T 2pzi_A           93 LGWIYLALDRNVNGRPVVLKGLVHSGDAEAQAMAMAERQFLAEVVHPSIVQIFNFVEHTD---RHGDPVGYIVMEYVGGQ  169 (681)
T ss_dssp             TEEEEEEEEGGGTTEEEEEEESCSSCCHHHHHHHHHHHGGGGGCCCTTBCCEEEEEEEEC---TTSCEEEEEEEECCCCE
T ss_pred             CeEEEEEEEcCCCCcEEEEEEeCccCCHHHHHHHHHHHHHHHhcCCCCcCeEeeeEeecC---CCCCceeEEEEEeCCCC
Confidence            677887 22     22334443332 3345567889999999999999999999874321   01112269999999999


Q ss_pred             cHHHH------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe------EEEecCCccc-------ccccccccCCCC
Q psy7174          78 TKARF------YSHLRYLENQQILEGLQALKSSM-------PALL------KKFVGIGIGR-------HVCTLYCTRGAP  131 (188)
Q Consensus        78 ~l~~~------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------lkl~dfg~~~-------~~~~~~y~~~aP  131 (188)
                      +|..+      ...+..++ .|++.||.|||+++       |+||      +||+|||++.       ..||+.|  +||
T Consensus       170 ~L~~~~~~~l~~~~~~~~~-~qi~~aL~~lH~~giiHrDlkp~NIll~~~~~kl~DFG~a~~~~~~~~~~gt~~y--~aP  246 (681)
T 2pzi_A          170 SLKRSKGQKLPVAEAIAYL-LEILPALSYLHSIGLVYNDLKPENIMLTEEQLKLIDLGAVSRINSFGYLYGTPGF--QAP  246 (681)
T ss_dssp             ECC----CCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECSSCEEECCCTTCEETTCCSCCCCCTTT--SCT
T ss_pred             cHHHHHhCCCCHHHHHHHH-HHHHHHHHHHHHCCCeecccChHHeEEeCCcEEEEecccchhcccCCccCCCccc--cCH
Confidence            98875      34566677 79999999999998       6677      5999999864       4588999  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC--------h----HHHHHHHHhhcCCCCCCCCC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES--------D----LDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~--------~----~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |++.+.  ++.++|||||||++|+|++|.+||.+..        +    ...+..++..+..+.|...|
T Consensus       247 E~~~~~--~~~~sDi~slG~~l~~l~~g~~~~~~~~~~~~~~~~~~~~~~~~l~~li~~~l~~dP~~R~  313 (681)
T 2pzi_A          247 EIVRTG--PTVATDIYTVGRTLAALTLDLPTRNGRYVDGLPEDDPVLKTYDSYGRLLRRAIDPDPRQRF  313 (681)
T ss_dssp             THHHHC--SCHHHHHHHHHHHHHHHHSCCCEETTEECSSCCTTCHHHHHCHHHHHHHHHHTCSSGGGSC
T ss_pred             HHHcCC--CCCceehhhhHHHHHHHHhCCCCCcccccccccccccccccCHHHHHHHhhhccCChhhCC
Confidence            998763  5899999999999999999999886421        1    13355566666666666544

>2dyl_A Dual specificity mitogen-activated protein kinase kinase 7; MKK7, activated mutant, ATP-binding, structural genomics, NPPSFA; 2.45A {Homo sapiens}

Probab=99.92  E-value=3.5e-24  Score=167.52  Aligned_cols=160  Identities=18%  Similarity=0.247  Sum_probs=108.4

Q ss_pred             cccccc-c----CCcccccccccc-chhhh-hHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVE-TQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~-~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+... ..... +.+.++..+++.++||||+++++++        .++...+++|||+ ++
T Consensus        38 ~g~V~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~~~~~~h~~i~~~~~~~--------~~~~~~~lv~e~~-~~  108 (318)
T 2dyl_A           38 CGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGTF--------ITNTDVFIAMELM-GT  108 (318)
T ss_dssp             --CEEEEEETTTCCEEEEEEEETTSCHHHHHHHHHHHHHHHHTTTCTTBCCEEEEE--------ECSSEEEEEECCC-SE
T ss_pred             CeeEEEEEEecCCeEEEEEEecccccchHHHHHHHHHHHHHHhcCCCceeeEEEEE--------ecCCcEEEEEecc-CC
Confidence            677887 2    233334444432 22222 3334455577888999999999986        3456789999999 45


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhc-C-------CCCe-------EEEecCCccc----------cccc
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSS-M-------PALL-------KKFVGIGIGR----------HVCT  123 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~-~-------~~~i-------lkl~dfg~~~----------~~~~  123 (188)
                      .+..+         +..+..++ .|++.||.|||+. +       |+||       +||+|||++.          ..++
T Consensus       109 ~~~~l~~~~~~~~~~~~~~~~~-~~i~~~l~~lH~~~~i~H~dlkp~Nil~~~~~~~kl~dfg~~~~~~~~~~~~~~~~~  187 (318)
T 2dyl_A          109 CAEKLKKRMQGPIPERILGKMT-VAIVKALYYLKEKHGVIHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGC  187 (318)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHHHCCCCCCCCGGGEEECTTSCEEECCCTTC--------------C
T ss_pred             cHHHHHHHhccCCCHHHHHHHH-HHHHHHHHHHHhhCCEEeCCCCHHHEEECCCCCEEEEECCCchhccCCccccccCCC
Confidence            55443         23455666 7999999999995 6       5555       6999999864          3578


Q ss_pred             ccccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHH
Q psy7174         124 LYCTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIF  176 (188)
Q Consensus       124 ~~y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~  176 (188)
                      ..|  +|||++..    ...++.++||||+||++|+|++|+.||... +....+..+.
T Consensus       188 ~~y--~aPE~~~~~~~~~~~~~~~~Di~slG~il~~l~~g~~pf~~~~~~~~~~~~~~  243 (318)
T 2dyl_A          188 AAY--MAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCKTDFEVLTKVL  243 (318)
T ss_dssp             CTT--CCHHHHC--------CCTHHHHHHHHHHHHHHHHSSCTTTTCCSHHHHHHHHH
T ss_pred             ccc--cChhhcccccccccCCccccchhhHHHHHHHHHhCCCCCCCCCccHHHHHHHh
Confidence            889  99999852    234889999999999999999999999763 3333444443

>1b6c_B TGF-B superfamily receptor type I; complex (isomerase/protein kinase), receptor serine/threonine kinase; 2.60A {Homo sapiens} SCOP: d.144.1.7 PDB: 1ias_A 2x7o_A* 3faa_A* 3kcf_A*

Probab=99.92  E-value=2.4e-24  Score=170.19  Aligned_cols=155  Identities=14%  Similarity=0.087  Sum_probs=114.1

Q ss_pred             cccccccCCccccccccccchhhhhHHHHHHHHHHh--CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQDRR--LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~~~~~~~~~~~E~~il~~--l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+.......+++|.......+.+.+|+++++.  ++||||+++++++...    .......++++||+.+++|..+
T Consensus        55 ~g~Vy~~~~~~~~vavK~~~~~~~~~~~~e~~~~~~~~l~h~ni~~~~~~~~~~----~~~~~~~~lv~e~~~~g~L~~~  130 (342)
T 1b6c_B           55 FGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD----NGTWTQLWLVSDYHEHGSLFDY  130 (342)
T ss_dssp             TEEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHHHSCCCCTTBCCEEEEEECC----CSSCCCEEEEECCCTTCBHHHH
T ss_pred             CcEEEEEEEcCccEEEEEeCchhHHHHHHHHHHHHHhhcCCCcEEEEEeeeccc----CCccceeEEEEeecCCCcHHHH
Confidence            677887111112344554444556678899999987  7899999999986321    1112378999999999999886


Q ss_pred             H-------HHHHHHHHHHHHHHHHHHh--------hcC-------CCCe-------EEEecCCccc--------------
Q psy7174          83 Y-------SHLRYLENQQILEGLQALK--------SSM-------PALL-------KKFVGIGIGR--------------  119 (188)
Q Consensus        83 ~-------~~~~~~~~~qi~~gl~~lH--------~~~-------~~~i-------lkl~dfg~~~--------------  119 (188)
                      .       ..+..++ .|++.||.|||        +.+       |+||       +||+|||++.              
T Consensus       131 l~~~~~~~~~~~~i~-~~i~~~l~~lH~~~~~~~~~~~ivH~Dlkp~NIll~~~~~~kL~Dfg~~~~~~~~~~~~~~~~~  209 (342)
T 1b6c_B          131 LNRYTVTVEGMIKLA-LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN  209 (342)
T ss_dssp             HHHCCBCHHHHHHHH-HHHHHHHHHHHCCBCSTTCBCEEECSCCSGGGEEECTTSCEEECCCTTCEEEETTTTEEEECCC
T ss_pred             HhccCccHHHHHHHH-HHHHHHHHHHHHHHhhhcccCCeeeCCCCHHHEEECCCCCEEEEECCCceeccccccccccccc
Confidence            3       3456666 79999999999        555       6666       5999999753              


Q ss_pred             -ccccccccCCCCccccccCC-----CCchhHHHHHHHHHHHHHhC----------CCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARM-----YGVGIDMWAVGCIICELLLK----------APFLPGE  166 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~-----~~~~~DiwslG~il~el~~g----------~~pf~~~  166 (188)
                       ..||..|  +|||++.+...     ++.++|||||||++|+|++|          ..||...
T Consensus       210 ~~~gt~~y--~aPE~~~~~~~~~~~~~~~~~Di~slG~il~el~tg~~~~~~~~~~~~p~~~~  270 (342)
T 1b6c_B          210 HRVGTKRY--MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGGIHEDYQLPYYDL  270 (342)
T ss_dssp             SCCCCGGG--CCHHHHTSCCCTTCHHHHHHHHHHHHHHHHHHHHTTBCBTTBCCCCCCTTTTT
T ss_pred             cCCcCccc--CCHhhhcccccccccccCCcccHHHHHHHHHHHHhccCcCCcccccccCcccc
Confidence             2578889  99999876421     33689999999999999999          7788653

>3sv0_A Casein kinase I-like; typical kinase domain fold, cytosol, transferase; 2.00A {Oryza sativa japonica group}

Probab=99.92  E-value=1.6e-24  Score=179.54  Aligned_cols=151  Identities=12%  Similarity=0.106  Sum_probs=112.8

Q ss_pred             cccccc-cCCc-ccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++. ...+++|.. .....+++.+|+++++.++|++.+..+..+       ...+...+++|||+ +++|..
T Consensus        20 fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~il~~L~~~~~i~~i~~~-------~~~~~~~~lvme~~-g~sL~~   91 (483)
T 3sv0_A           20 FGEIYLGTNIQTNEEVAIKLENVKTKHPQLLYESKIYRILQGGTGIPNVRWF-------GVEGDYNVLVMDLL-GPSLED   91 (483)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEETTCSSCCHHHHHHHHHHTTTSTTCCCEEEE-------EEETTEEEEEEECC-CCBHHH
T ss_pred             CEEEEEEEECCCCcEEEEEEeccccccHHHHHHHHHHHHhcCCCCCCeEEEE-------EeeCCEEEEEEECC-CCCHHH
Confidence            678887 2221 123444432 123345689999999999975544444332       13456779999999 888877


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------------
Q psy7174          82 FY---------SHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------------  119 (188)
Q Consensus        82 ~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------------  119 (188)
                      +.         ..+..++ .||+.||.|||+++       |+||          +||+|||++.                
T Consensus        92 ll~~~~~~l~~~~~~~i~-~qi~~aL~yLH~~gIvHrDIKP~NILl~~~~~~~~vkL~DFGla~~~~~~~~~~~~~~~~~  170 (483)
T 3sv0_A           92 LFNFCSRKLSLKTVLMLA-DQMINRVEFVHSKSFLHRDIKPDNFLMGLGRRANQVYIIDFGLAKKYRDTSTHQHIPYREN  170 (483)
T ss_dssp             HHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECCGGGTTCEEECCCTTCEECBCTTTCCBCCCCCC
T ss_pred             HHHhhcCCCCHHHHHHHH-HHHHHHHHHHHHCCEeecccCcceEEEecCCCCCeEEEEeCCcceeccCCccccccccccc
Confidence            63         3466677 89999999999998       6666          4899999853                


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                        ..||..|  +|||++.+.. ++.++|||||||++|+|++|+.||.+..
T Consensus       171 ~~~~gt~~Y--~aPE~~~~~~-~s~~sDvwSlGvil~elltG~~Pf~~~~  217 (483)
T 3sv0_A          171 KNLTGTARY--ASVNTHLGIE-QSRRDDLESLGYVLMYFLRGSLPWQGLK  217 (483)
T ss_dssp             CCCCSCTTT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             cccCCCccc--cCHHHhcCCC-CChHHHHHHHHHHHHHHHhCCCCCcccc
Confidence              3578889  9999998865 9999999999999999999999998743

>3a99_A Proto-oncogene serine/threonine-protein kinase PI; PIM-1, P27KIP1, peptide drug, prostate cancer, transferase; HET: ANP; 1.60A {Homo sapiens} PDB: 3bgq_A* 3bgp_A* 2obj_A* 3bgz_A* 3t9i_A* 3dcv_A* 1xws_A* 2xj1_A* 2xix_A* 2xiz_A* 2xj0_A* 2xiy_A* 2xj2_A* 3f2a_A* 1xr1_A* 1xqz_A* 3cy2_A* 3cxw_A* 3cy3_A* 2bik_B* ...

Probab=99.91  E-value=6.2e-25  Score=172.78  Aligned_cols=173  Identities=12%  Similarity=0.124  Sum_probs=125.6

Q ss_pred             cccccc-c----CCccccccccccch------hhhhHHHHHHHHHHhCC--CCCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDV------NVETQAKAEGKQDRRLD--YANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~------~~~~~~~~E~~il~~l~--h~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||+ .    ++..++|.+.+...      ...+.+.+|++++++++  ||||+++++++        .++...++++
T Consensus        56 ~g~Vy~~~~~~~~~~vavK~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~~~~~i~~~~~~~--------~~~~~~~lv~  127 (320)
T 3a99_A           56 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF--------ERPDSFVLIL  127 (320)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE--------ECSSEEEEEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEecccchhhhhhhhhhHHHHHHHHHHhhccCCCCceEEEEEE--------ecCCcEEEEE
Confidence            677887 2    22333444433211      23356788999999996  59999999986        3456789999


Q ss_pred             ecccc-ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc--------
Q psy7174          72 KIFTK-TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR--------  119 (188)
Q Consensus        72 e~~~~-~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~--------  119 (188)
                      |++.+ +++..+        ...+..++ .|++.||.|||+.+       |+||        +||+|||++.        
T Consensus       128 e~~~~~~~L~~~l~~~~~l~~~~~~~i~-~qi~~~L~~LH~~~ivH~Dlkp~NIll~~~~~~~kL~Dfg~~~~~~~~~~~  206 (320)
T 3a99_A          128 ERPEPVQDLFDFITERGALQEELARSFF-WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT  206 (320)
T ss_dssp             ECCSSEEEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCCTTCEECCSSCBC
T ss_pred             EcCCCCccHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCcEeCCCCHHHEEEeCCCCCEEEeeCcccccccccccc
Confidence            99975 788775        23456666 89999999999998       5555        6999999754        


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh------------HHHHHHHHhhcCCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD------------LDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~------------~~~~~~i~~~~~~p~~~~  186 (188)
                       ..||..|  +|||++.+...++.++|||||||++|+|++|+.||.+.+.            ...+..+++.+..+.|+.
T Consensus       207 ~~~gt~~y--~aPE~~~~~~~~~~~~Di~slG~il~el~~g~~pf~~~~~~~~~~~~~~~~~~~~~~~li~~~l~~dp~~  284 (320)
T 3a99_A          207 DFDGTRVY--SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFFRQRVSSECQHLIRWCLALRPSD  284 (320)
T ss_dssp             CCCSCGGG--SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSHHHHHHCCCCCSSCCCHHHHHHHHHHTCSSGGG
T ss_pred             CCCCCccC--CChHHhccCCCCCccchHHhHHHHHHHHHHCCCCCCChhhhhcccccccccCCHHHHHHHHHHccCChhh
Confidence             3578889  9999987765457899999999999999999999964321            123445555555666655


Q ss_pred             CC
Q psy7174         187 WP  188 (188)
Q Consensus       187 ~p  188 (188)
                      .|
T Consensus       285 Rp  286 (320)
T 3a99_A          285 RP  286 (320)
T ss_dssp             SC
T ss_pred             Cc
Confidence            54

>3fhr_A MAP kinase-activated protein kinase 3; kinase-inhibitor complex, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; HET: P4O; 1.90A {Homo sapiens} PDB: 3fxw_A* 3r1n_A* 3she_A* 2oza_A 3fyk_X* 3fyj_X* 2p3g_X* 3ka0_A* 3fpm_A* 2pzy_A* 3a2c_A* 3kc3_A* 3gok_A* 2jbo_A* 2jbp_A* 3r2y_A* 3r30_A* 3r2b_A*

Probab=99.91  E-value=1.4e-24  Score=171.91  Aligned_cols=154  Identities=19%  Similarity=0.187  Sum_probs=96.9

Q ss_pred             cccccc-cCCc-cccccccccchhhhhHHHHHHH-HHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARCDVNVETQAKAEGK-QDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~~~~~~~~~~~E~~-il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++. ...+++|....  .....+|+. .++.++||||+++++++...    ...+...+++|||+.+++|..
T Consensus        42 ~g~V~~~~~~~~~~~vavK~~~~--~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~----~~~~~~~~lv~e~~~gg~L~~  115 (336)
T 3fhr_A           42 NGKVLECFHRRTGQKCALKLLYD--SPKARQEVDHHWQASGGPHIVCILDVYENM----HHGKRCLLIIMECMEGGELFS  115 (336)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEES--SHHHHHHHHHHHHHTTSTTBCCEEEEEEEE----ETTEEEEEEEEECCTTEEHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEecC--cHHHHHHHHHHHHhcCCCChHHHHHHHhhc----cCCCceEEEEEeccCCCCHHH
Confidence            677887 2221 12334443211  223344444 45677899999999986321    122445799999999999987


Q ss_pred             H----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc---------cccccc
Q psy7174          82 F----------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR---------HVCTLY  125 (188)
Q Consensus        82 ~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~---------~~~~~~  125 (188)
                      +          +..+..++ .|++.||.|||+++       |+||          +||+|||++.         ..+|+.
T Consensus       116 ~l~~~~~~~l~~~~~~~i~-~ql~~~l~~LH~~~ivH~dlkp~NIll~~~~~~~~~kl~Dfg~~~~~~~~~~~~~~~t~~  194 (336)
T 3fhr_A          116 RIQERGDQAFTEREAAEIM-RDIGTAIQFLHSHNIAHRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY  194 (336)
T ss_dssp             HHHTC-CCCCBHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEESCSSTTCCEEECCCTTCEEC-------------
T ss_pred             HHHhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCeecCCCCHHHEEEEecCCCceEEEeccccceeccccccccCCCCcC
Confidence            5          34566677 89999999999998       4444          6999999864         456888


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      |  +|||++.+.. ++.++||||+||++|+|++|..||.+...
T Consensus       195 y--~aPE~~~~~~-~~~~~Di~slG~il~~l~~g~~pf~~~~~  234 (336)
T 3fhr_A          195 Y--VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGFPPFYSNTG  234 (336)
T ss_dssp             -----------CH-HHHHHHHHHHHHHHHHHHHSSCCC-----
T ss_pred             c--cChhhhCCCC-CCchhhHHHHHHHHHHHHHCCCCCCCccc
Confidence            9  9999997655 89999999999999999999999966543

>3m2w_A MAP kinase-activated protein kinase 2; small molecule inhibitor, spiroazetidine-tetracycle, ATP-SIT inhibitor, novartis compound NVP-BXS169; HET: L8I; 2.41A {Homo sapiens} PDB: 3kga_A* 3m42_A*

Probab=99.89  E-value=9.3e-23  Score=158.75  Aligned_cols=141  Identities=18%  Similarity=0.193  Sum_probs=102.6

Q ss_pred             cccccc-cCCcc-ccccccccchhhhhHHHHHHHHH-HhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWS-PNTPMARCDVNVETQAKAEGKQD-RRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~-~~~~i~~~~~~~~~~~~~E~~il-~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++.. ..+++|..  +..+.+.+|++++ +.++||||+++++++...    ..++...+++|||+.+++|..
T Consensus        31 ~g~V~~~~~~~~~~~vaiK~~--~~~~~~~~e~~~~~~~~~h~~i~~~~~~~~~~----~~~~~~~~lv~e~~~~~~L~~  104 (299)
T 3m2w_A           31 NGKVLQIFNKRTQEKFALKML--QDCPKARREVELHWRASQCPHIVRIVDVYENL----YAGRKCLLIVMECLDGGELFS  104 (299)
T ss_dssp             TEEEEEEEETTTCCEEEEEEE--ECSHHHHHHHHHHHHHTTSTTBCCEEEEEEEE----ETTEEEEEEEECCCCSCBHHH
T ss_pred             CeEEEEEEEcCCCcEEEEEEe--cccHHHHHHHHHHHHhccCCCchhHHhhhhhh----cCCCceEEEEEeecCCCcHHH
Confidence            677776 22221 23444432  2245678999988 566899999999986321    123567899999999999987


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHhhcC-------CCC----------eEEEecCCcccccccccccCCCCccc
Q psy7174          82 FY----------SHLRYLENQQILEGLQALKSSM-------PAL----------LKKFVGIGIGRHVCTLYCTRGAPELL  134 (188)
Q Consensus        82 ~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~----------ilkl~dfg~~~~~~~~~y~~~aPe~~  134 (188)
                      +.          ..+..++ .|++.||.|||+.+       |+|          .+||+|||++.....           
T Consensus       105 ~l~~~~~~~~~~~~~~~i~-~qi~~~l~~lH~~~i~H~dlkp~Nil~~~~~~~~~~kl~Dfg~a~~~~~-----------  172 (299)
T 3m2w_A          105 RIQDRGDQAFTEREASEIM-KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTG-----------  172 (299)
T ss_dssp             HHHHCTTCCCBHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEESSSSTTCCEEECCCTTCEECTT-----------
T ss_pred             HHHhccCCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCCCHHHEEEecCCCCCcEEEecccccccccc-----------
Confidence            52          3456677 89999999999998       444          479999998743221           


Q ss_pred             cccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         135 FGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       135 ~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                         ..++.++||||+||++|+|++|++||.+.
T Consensus       173 ---~~~~~~~DiwslG~il~el~tg~~pf~~~  201 (299)
T 3m2w_A          173 ---EKYDKSCDMWSLGVIMYILLCGYPPFYSN  201 (299)
T ss_dssp             ---CGGGGHHHHHHHHHHHHHHHHSSCSCCC-
T ss_pred             ---ccCCchhhHHHHHHHHHHHHHCCCCCCCC
Confidence               22788999999999999999999999653

>3uqc_A Probable conserved transmembrane protein; structural genomics, TB structural genomics consortium, TBSG fold, FHAA, transferase; 2.26A {Mycobacterium tuberculosis} PDB: 3oun_B* 3otv_A 3ouk_A

Probab=99.88  E-value=3e-22  Score=155.38  Aligned_cols=142  Identities=12%  Similarity=0.034  Sum_probs=104.6

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+...   .....+.+.+|++++++++||||+++++++        .++...+++|||+.+
T Consensus        44 ~g~Vy~a~~~~~~~~vavK~~~~~~~~~~~~~~~~~~e~~~l~~l~hp~iv~~~~~~--------~~~~~~~lv~e~~~g  115 (286)
T 3uqc_A           44 PLQFWQALDTALDRQVALTFVDPQGVLPDDVLQETLSRTLRLSRIDKPGVARVLDVV--------HTRAGGLVVAEWIRG  115 (286)
T ss_dssp             TCEEEEEEETTTTEEEEEEESCTTCCSCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCCE
T ss_pred             CeEEEEEEecCCCceEEEEEECcccccCHHHHHHHHHHHHHHhcCCCCCcceeeEEE--------EECCcEEEEEEecCC
Confidence            677887 2    233345544442   233447789999999999999999999986        345678999999999


Q ss_pred             ccHHHHH------HHHHHHHHHHHHHHHHHHhhcC-------CCCeEEEecCCcccccccccccCCCCccccccCCCCch
Q psy7174          77 TTKARFY------SHLRYLENQQILEGLQALKSSM-------PALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVG  143 (188)
Q Consensus        77 ~~l~~~~------~~~~~~~~~qi~~gl~~lH~~~-------~~~ilkl~dfg~~~~~~~~~y~~~aPe~~~~~~~~~~~  143 (188)
                      ++|..+.      ..+..++ .|++.||.|||+++       |+||+- .+.|.. .+++..|  ++|        ++.+
T Consensus       116 ~~L~~~l~~~~~~~~~~~i~-~ql~~aL~~lH~~givH~Dikp~NIll-~~~g~~-kl~~~~~--~~~--------~~~~  182 (286)
T 3uqc_A          116 GSLQEVADTSPSPVGAIRAM-QSLAAAADAAHRAGVALSIDHPSRVRV-SIDGDV-VLAYPAT--MPD--------ANPQ  182 (286)
T ss_dssp             EEHHHHHTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCSGGGEEE-ETTSCE-EECSCCC--CTT--------CCHH
T ss_pred             CCHHHHHhcCCChHHHHHHH-HHHHHHHHHHHHCCCccCCCCcccEEE-cCCCCE-EEEeccc--cCC--------CCch
Confidence            9998862      3455566 79999999999998       777752 222211 1224445  432        7899


Q ss_pred             hHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         144 IDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       144 ~DiwslG~il~el~~g~~pf~~~~  167 (188)
                      +|||||||++|+|++|+.||.+.+
T Consensus       183 ~Di~slG~il~elltg~~Pf~~~~  206 (286)
T 3uqc_A          183 DDIRGIGASLYALLVNRWPLPEAG  206 (286)
T ss_dssp             HHHHHHHHHHHHHHHSEECSCCCS
T ss_pred             hHHHHHHHHHHHHHHCCCCCCcCC
Confidence            999999999999999999997654

>2vuw_A Serine/threonine-protein kinase haspin; cell cycle, transferase, CAsp8, nucleotide binding; HET: MSE 5ID MPD; 1.80A {Homo sapiens} PDB: 3f2n_A* 3e7v_A* 3dlz_A* 3fmd_A* 3iq7_A* 2wb8_A

Probab=99.88  E-value=1.2e-23  Score=166.31  Aligned_cols=156  Identities=12%  Similarity=0.007  Sum_probs=110.5

Q ss_pred             cccccc---cCCccccccccccc--------hhhhhHHHHHHHHHHhCC---------CCCeeEEeeecc----------
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCD--------VNVETQAKAEGKQDRRLD---------YANIIQYLSLPV----------   54 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~--------~~~~~~~~~E~~il~~l~---------h~niv~~~~~~~----------   54 (188)
                      ||.||+   +++..++|.+.+..        ....+.+.+|+++++.++         ||||+++.+++.          
T Consensus        33 ~g~V~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~l~~~~~~~h~niv~l~~~~~~~~~~hp~iv  112 (336)
T 2vuw_A           33 FGEVFQTIADHTPVAIKIIAIEGPDLVNGSHQKTFEEILPEIIISKELSLLSGEVCNRTEGFIGLNSVHCVQGSYPPLLL  112 (336)
T ss_dssp             TEEEEEEEETTEEEEEEEEEESCSSCBTTBCCBCHHHHHHHHHHHHHHHHGGGCSSSBCCCBCCEEEEEEEESSCCHHHH
T ss_pred             ceEEEEEEeCCceEEEEEEecCCccccccccchhHHHHHHHHHHHHHHHHhhccccccCCchhhhcceeEecCCCcHHHH
Confidence            688888   33344455554421        122377889999999886         666666655421          


Q ss_pred             -------ccc-----CCCCCCCCccEEEEecccccc-HHHH------HHHHHHHHHHHHHHHHHHHh-hcC-------CC
Q psy7174          55 -------ETL-----QPTTLSTSSDYIVVKIFTKTT-KARF------YSHLRYLENQQILEGLQALK-SSM-------PA  107 (188)
Q Consensus        55 -------~~~-----~~~~~~~~~~~iv~e~~~~~~-l~~~------~~~~~~~~~~qi~~gl~~lH-~~~-------~~  107 (188)
                             ...     .+...++...++||||+.+|+ +..+      +..++.++ .|++.||.||| +.+       |+
T Consensus       113 ~~~~~~~~~~~~~~~~~~~~~~~~~~lv~E~~~~g~ll~~~~~~~~~~~~~~~i~-~qi~~aL~~lH~~~~ivHrDlKp~  191 (336)
T 2vuw_A          113 KAWDHYNSTKGSANDRPDFFKDDQLFIVLEFEFGGIDLEQMRTKLSSLATAKSIL-HQLTASLAVAEASLRFEHRDLHWG  191 (336)
T ss_dssp             HHHHHHHHHTCCSSCCSCCCCTTCEEEEEEEECCCEETGGGTTTCCCHHHHHHHH-HHHHHHHHHHHHHHCCBCSCCCGG
T ss_pred             HHHHHHhhhccccccCccccccCeEEEEEEecCCCccHHHHHhcCCCHHHHHHHH-HHHHHHHHHHHHhCCEeECCCCHH
Confidence                   100     000123678899999998885 4443      45677788 89999999999 777       22


Q ss_pred             C---------------------------eEEEecCCccc------ccccccccCCCCccccccCCCCchhHHHHHHHH-H
Q psy7174         108 L---------------------------LKKFVGIGIGR------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCI-I  153 (188)
Q Consensus       108 ~---------------------------ilkl~dfg~~~------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~i-l  153 (188)
                      |                           .+||+|||+++      ..||+.|  +|||++.+.  .+.++||||++++ .
T Consensus       192 NILl~~~~~~~~~~~~~~~~~~~~~~~~~vkL~DFG~a~~~~~~~~~gt~~y--~aPE~~~g~--~~~~~Diwsl~~~~~  267 (336)
T 2vuw_A          192 NVLLKKTSLKKLHYTLNGKSSTIPSCGLQVSIIDYTLSRLERDGIVVFCDVS--MDEDLFTGD--GDYQFDIYRLMKKEN  267 (336)
T ss_dssp             GEEEEECSCSEEEEEETTEEEEEECTTEEEEECCCTTCBEEETTEEECCCCT--TCSGGGCCC--SSHHHHHHHHHHHHH
T ss_pred             HEEEeccCCcceeeeccCccccccCCCceEEEeeccccEecCCCcEEEeecc--cChhhhcCC--CccceehhhhhCCCC
Confidence            2                           57999999875      4689999  999999864  3889999998877 6


Q ss_pred             HHHHhCCCCCCC
Q psy7174         154 CELLLKAPFLPG  165 (188)
Q Consensus       154 ~el~~g~~pf~~  165 (188)
                      +++++|..||.+
T Consensus       268 ~~~~~g~~p~~~  279 (336)
T 2vuw_A          268 NNRWGEYHPYSN  279 (336)
T ss_dssp             TTCTTSCCTHHH
T ss_pred             cccccccCCCcc
Confidence            777889999853

>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*

Probab=99.85  E-value=6.8e-23  Score=172.78  Aligned_cols=121  Identities=12%  Similarity=0.017  Sum_probs=86.3

Q ss_pred             hhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHH-----HHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH-----LRYLENQQILEGLQ   99 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~-----~~~~~~~qi~~gl~   99 (188)
                      .+.+++.+|+++|+++ +|+||+++++++        .++...|+||||+.|++|.+....     ...++ +||+.||+
T Consensus       283 ~~~~~~~~E~~~l~~~~~~~~i~~~~~~~--------ed~~~~yLVMEyv~G~~L~d~i~~~~~l~~~~I~-~QIl~AL~  353 (569)
T 4azs_A          283 RNKYELHNEIKFLTQPPAGFDAPAVLAHG--------ENAQSGWLVMEKLPGRLLSDMLAAGEEIDREKIL-GSLLRSLA  353 (569)
T ss_dssp             HHHHHHHHHHHHHHSCCTTCCCCCEEEEE--------ECSSEEEEEEECCCSEEHHHHHHTTCCCCHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHHhcCCCCCeeEEEEEE--------EECCEEEEEEecCCCCcHHHHHHhCCCCCHHHHH-HHHHHHHH
Confidence            3456799999999999 599999999975        667889999999999999987321     23466 79999999


Q ss_pred             HHhhcC-------CCCe-------EEEecCCccc-----------ccccccccCCCCccccccCCCCchhHHHHHHHHHH
Q psy7174         100 ALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIIC  154 (188)
Q Consensus       100 ~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~  154 (188)
                      |+|++|       |+||       +||+|||+++           .+||+.|  +|||++.+.  +..++|+||+|++++
T Consensus       354 ylH~~GIIHRDIKPeNILL~~dg~vKL~DFGlAr~~~~~~~~~~t~vGTp~Y--mAPE~l~g~--~~~~~d~~s~g~~~~  429 (569)
T 4azs_A          354 ALEKQGFWHDDVRPWNVMVDARQHARLIDFGSIVTTPQDCSWPTNLVQSFFV--FVNELFAEN--KSWNGFWRSAPVHPF  429 (569)
T ss_dssp             HHHHTTCEESCCCGGGEEECTTSCEEECCCTTEESCC---CCSHHHHHHHHH--HHHHHC-------------------C
T ss_pred             HHHHCCceeccCchHhEEECCCCCEEEeecccCeeCCCCCccccCceechhh--ccHHHhCCC--CCCcccccccccchh
Confidence            999999       7787       5999999854           4578999  999999763  677899999999887


Q ss_pred             HHHhC
Q psy7174         155 ELLLK  159 (188)
Q Consensus       155 el~~g  159 (188)
                      ++.++
T Consensus       430 ~l~~~  434 (569)
T 4azs_A          430 NLPQP  434 (569)
T ss_dssp             CCCTT
T ss_pred             hhccc
Confidence            66544

>3dzo_A Rhoptry kinase domain; parasitic disease, transferase, structural genomics, structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}

Probab=99.85  E-value=4.2e-21  Score=156.08  Aligned_cols=157  Identities=15%  Similarity=0.042  Sum_probs=101.0

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCC-CCeeEEee---------ecccccCC-------
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDY-ANIIQYLS---------LPVETLQP-------   59 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h-~niv~~~~---------~~~~~~~~-------   59 (188)
                      ||.||+ .    ++..++|.+...   .....+.+.+|+.+++.++| +|......         ........       
T Consensus        91 fG~Vy~a~~~~~g~~vAvK~~~~~~~~~~~~~~~~~~E~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  170 (413)
T 3dzo_A           91 PYAYLEATDQETGESFEVHVPYFTERPPSNAIKQMKEEVLRLRLLRGIKNQKQAKVHLRFIFPFDLVKDPQKKKMIRVRL  170 (413)
T ss_dssp             TEEEEEEEETTTCCEEEEEEECCSCC----CCHHHHHHHHGGGGSTTCCSHHHHHHHTCBCCCCEEEECCC---------
T ss_pred             CEEEEEEEecCCCCceEEEEEecCCCccHHHHHHHHHHHHHHHhhccCCCHHHHHHhcccccchhhcccCCCCccccccC
Confidence            788888 2    344445544422   23346778999999999987 32211111         00000000       


Q ss_pred             --CCCCCCccEEEEeccccccHHHHHH---------------HHHHHHHHHHHHHHHHHhhcC-------CCCe------
Q psy7174          60 --TTLSTSSDYIVVKIFTKTTKARFYS---------------HLRYLENQQILEGLQALKSSM-------PALL------  109 (188)
Q Consensus        60 --~~~~~~~~~iv~e~~~~~~l~~~~~---------------~~~~~~~~qi~~gl~~lH~~~-------~~~i------  109 (188)
                        ........+++++. .+++|..+.+               .+..++ .|++.||+|||+++       |+||      
T Consensus       171 ~~~~~~~~~~~~~~~~-~~~~L~~ll~~l~~~~~~~~~l~~~~~~~i~-~qi~~aL~~LH~~~iiHrDiKp~NILl~~~~  248 (413)
T 3dzo_A          171 DERDMWVLSRFFLYPR-MQSNLQTFGEVLLSHSSTHKSLVHHARLQLT-LQVIRLLASLHHYGLVHTYLRPVDIVLDQRG  248 (413)
T ss_dssp             ------CCSEEEEEEC-CSEEHHHHHHHHHHHTTTSHHHHHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTC
T ss_pred             CCccccccceEEEeeh-hcCCHHHHHHHhhcccccCCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCCcccceEEEecCC
Confidence              00001233555554 4677765532               344555 79999999999998       6666      


Q ss_pred             -EEEecCCccc--------ccccccccCCCCcccc---------ccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         110 -KKFVGIGIGR--------HVCTLYCTRGAPELLF---------GARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       110 -lkl~dfg~~~--------~~~~~~y~~~aPe~~~---------~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                       +||+|||++.        ..| ..|  +|||++.         ....++.++|||||||++|+|++|+.||.+.
T Consensus       249 ~~kL~DFG~a~~~~~~~~~~~g-~~y--~aPE~~~~~~~~~~~~~~~~~~~~~DvwSlGvil~elltg~~Pf~~~  320 (413)
T 3dzo_A          249 GVFLTGFEHLVRDGASAVSPIG-RGF--APPETTAERMLPFGQHHPTLMTFAFDTWTLGLAIYWIWCADLPNTDD  320 (413)
T ss_dssp             CEEECCGGGCEETTEEECCCCC-TTT--CCHHHHHHHTSTTGGGCCEEECHHHHHHHHHHHHHHHHHSSCCCCTT
T ss_pred             eEEEEeccceeecCCccccCCC-Cce--eCchhhhccccccccccCcCCCchhhHHHHHHHHHHHHHCCCCCCCc
Confidence             5999999854        456 889  9999983         2223788999999999999999999999764

>3en9_A Glycoprotease, O-sialoglycoprotein endopeptidase/protein kinase; endopeptidase activity, protein kinase activity; HET: TBR; 2.67A {Methanocaldococcus jannaschii} PDB: 3enh_A* 2vwb_A*

Probab=99.72  E-value=1.7e-18  Score=145.22  Aligned_cols=125  Identities=10%  Similarity=0.053  Sum_probs=101.1

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhhcC--
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSM--  105 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~~~--  105 (188)
                      .+++.+|++++++++||||+++..++        ..+...+++|||+.+++|.++......++ .|+++||.|||+++  
T Consensus       383 ~~~~~~E~~il~~l~h~nIv~~~~~~--------~~~~~~~lVmE~~~ggsL~~~l~~~~~i~-~qi~~aL~~LH~~gIi  453 (540)
T 3en9_A          383 KSRTAREARYLALVKDFGIPAPYIFD--------VDLDNKRIMMSYINGKLAKDVIEDNLDIA-YKIGEIVGKLHKNDVI  453 (540)
T ss_dssp             HHHHHHHHHHHHHGGGGTCCCCCEEE--------EETTTTEEEEECCCSEEHHHHSTTCTHHH-HHHHHHHHHHHHTTEE
T ss_pred             HHHHHHHHHHHHhcCCCCcCceEEEE--------EeCCccEEEEECCCCCCHHHHHHHHHHHH-HHHHHHHHHHHHCcCc
Confidence            45689999999999999999443332        23456799999999999998765555677 89999999999998  


Q ss_pred             -----CCCe-----EEEecCCccc------------------ccccccccCCCCccccc--cCCCCchhHHHHHHHHHHH
Q psy7174         106 -----PALL-----KKFVGIGIGR------------------HVCTLYCTRGAPELLFG--ARMYGVGIDMWAVGCIICE  155 (188)
Q Consensus       106 -----~~~i-----lkl~dfg~~~------------------~~~~~~y~~~aPe~~~~--~~~~~~~~DiwslG~il~e  155 (188)
                           |+||     +||+|||+++                  ..||+.|  +|||++..  .. |+..+|+||..+-..+
T Consensus       454 HrDiKp~NILl~~~~kL~DFGla~~~~~~~~~~~~~~~~~~~~~GT~~y--~APEv~~~~~~~-Y~~~~d~ws~vl~~l~  530 (540)
T 3en9_A          454 HNDLTTSNFIFDKDLYIIDFGLGKISNLDEDKAVDLIVFKKAVLSTHHE--KFDEIWERFLEG-YKSVYDRWEIILELMK  530 (540)
T ss_dssp             CTTCCTTSEEESSSEEECCCTTCEECCCHHHHHHHHHHHHHHHHHHCGG--GHHHHHHHHHHH-HHHHCTTHHHHHHHHH
T ss_pred             cCCCCHHHEEECCeEEEEECccCEECCCccccccchhhhhhhhcCCCCc--CCHHHHHHHHHH-HHHHHhHHHHHHHHHH
Confidence                 7887     5999999854                  3578899  99999975  33 7888999999988888


Q ss_pred             HHhCCCCCC
Q psy7174         156 LLLKAPFLP  164 (188)
Q Consensus       156 l~~g~~pf~  164 (188)
                      ...++.+|.
T Consensus       531 ~v~~r~rY~  539 (540)
T 3en9_A          531 DVERRARYV  539 (540)
T ss_dssp             HHHTCSCCC
T ss_pred             HHHhccccC
Confidence            877776663

>1zar_A RIO2 kinase; serine kinase, winged-helix, RIO domain, ADP-Mn complex, rRNA processing, transferase; HET: ADP; 1.75A {Archaeoglobus fulgidus} SCOP: a.4.5.56 d.144.1.9 PDB: 1tqi_A* 1tqp_A* 1tqm_A* 1zao_A*

Probab=99.32  E-value=3.3e-13  Score=104.33  Aligned_cols=91  Identities=11%  Similarity=0.029  Sum_probs=70.0

Q ss_pred             hhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-HHHHHHHHHHHHHHHHHHhhcC-
Q psy7174          28 ETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-SHLRYLENQQILEGLQALKSSM-  105 (188)
Q Consensus        28 ~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-~~~~~~~~~qi~~gl~~lH~~~-  105 (188)
                      ...+.+|++++++++  | +++.+++         +....+++|||+.+++|..+. .....++ .|++.||.|||+.+ 
T Consensus       148 ~~~~~~E~~~l~~l~--~-~~v~~~~---------~~~~~~lvmE~~~g~~L~~l~~~~~~~i~-~qi~~~l~~lH~~gi  214 (282)
T 1zar_A          148 IRSARNEFRALQKLQ--G-LAVPKVY---------AWEGNAVLMELIDAKELYRVRVENPDEVL-DMILEEVAKFYHRGI  214 (282)
T ss_dssp             HHHHHHHHHHHHHTT--T-SSSCCEE---------EEETTEEEEECCCCEEGGGCCCSCHHHHH-HHHHHHHHHHHHTTE
T ss_pred             HHHHHHHHHHHHhcc--C-CCcCeEE---------eccceEEEEEecCCCcHHHcchhhHHHHH-HHHHHHHHHHHHCCC
Confidence            456889999999999  4 5555542         235679999999999998741 2334566 79999999999998 


Q ss_pred             ------CCCe------EEEecCCcccccccccccCCCCcccc
Q psy7174         106 ------PALL------KKFVGIGIGRHVCTLYCTRGAPELLF  135 (188)
Q Consensus       106 ------~~~i------lkl~dfg~~~~~~~~~y~~~aPe~~~  135 (188)
                            |+||      +||+|||++..  +..+  .|||.+.
T Consensus       215 iHrDlkp~NILl~~~~vkl~DFG~a~~--~~~~--~a~e~l~  252 (282)
T 1zar_A          215 VHGDLSQYNVLVSEEGIWIIDFPQSVE--VGEE--GWREILE  252 (282)
T ss_dssp             ECSCCSTTSEEEETTEEEECCCTTCEE--TTST--THHHHHH
T ss_pred             EeCCCCHHHEEEECCcEEEEECCCCeE--CCCC--CHHHHHH
Confidence                  8887      59999999864  3446  7898874

>1zth_A RIO1 serine protein kinase; ribosome biogenesis, rRNA, ADP, manganese, transferase; HET: ADP; 1.89A {Archaeoglobus fulgidus} PDB: 1zp9_A* 1ztf_A*

Probab=98.72  E-value=2.1e-08  Score=76.22  Aligned_cols=79  Identities=11%  Similarity=0.143  Sum_probs=58.3

Q ss_pred             HHHHHHHHHHhCCCCCe--eEEeeecccccCCCCCCCCccEEEEecccc-c----cHHHHH-H----HHHHHHHHHHHHH
Q psy7174          30 QAKAEGKQDRRLDYANI--IQYLSLPVETLQPTTLSTSSDYIVVKIFTK-T----TKARFY-S----HLRYLENQQILEG   97 (188)
Q Consensus        30 ~~~~E~~il~~l~h~ni--v~~~~~~~~~~~~~~~~~~~~~iv~e~~~~-~----~l~~~~-~----~~~~~~~~qi~~g   97 (188)
                      .+.+|+++|++++|+++  ...++.            ...+++|||+.+ |    ++.... .    .+..++ .|++.|
T Consensus       116 ~~~~E~~~l~~l~~~~i~~p~~~~~------------~~~~lVmE~~g~~g~~~~~L~~~~~~~~~~~~~~i~-~qi~~~  182 (258)
T 1zth_A          116 WTEKEFRNLERAKEAGVSVPQPYTY------------MKNVLLMEFIGEDELPAPTLVELGRELKELDVEGIF-NDVVEN  182 (258)
T ss_dssp             HHHHHHHHHHHHHHTTCCCCCEEEE------------ETTEEEEECCEETTEECCBHHHHGGGGGGSCHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHhCCCCCCeEEEc------------CCCEEEEEecCCCCCccccHHHHhhccChHHHHHHH-HHHHHH
Confidence            67899999999998764  233331            357999999943 3    565542 1    455666 799999


Q ss_pred             HHHHh-hcC-------CCCe-----EEEecCCccccc
Q psy7174          98 LQALK-SSM-------PALL-----KKFVGIGIGRHV  121 (188)
Q Consensus        98 l~~lH-~~~-------~~~i-----lkl~dfg~~~~~  121 (188)
                      |.||| +.+       |+||     ++|+|||++...
T Consensus       183 l~~lH~~~givHrDlkp~NILl~~~~~liDFG~a~~~  219 (258)
T 1zth_A          183 VKRLYQEAELVHADLSEYNIMYIDKVYFIDMGQAVTL  219 (258)
T ss_dssp             HHHHHHTSCEECSSCSTTSEEESSSEEECCCTTCEET
T ss_pred             HHHHHHHCCEEeCCCCHHHEEEcCcEEEEECcccccC
Confidence            99999 877       7887     489999998654

>4gyi_A RIO2 kinase; protein kinase, ADP complex, phosphoaspartate, acyl-phosphat ribosome biogenesis, Ser/Thr protein kinase; HET: PHD ADP; 2.20A {Chaetomium thermophilum} PDB: 4gyg_A

Probab=97.95  E-value=1.3e-06  Score=70.14  Aligned_cols=45  Identities=11%  Similarity=0.027  Sum_probs=35.0

Q ss_pred             CccEEEEeccccccHHHHH--HHHHHHHHHHHHHHHHHHhhcC-------CCCeE
Q psy7174          65 SSDYIVVKIFTKTTKARFY--SHLRYLENQQILEGLQALKSSM-------PALLK  110 (188)
Q Consensus        65 ~~~~iv~e~~~~~~l~~~~--~~~~~~~~~qi~~gl~~lH~~~-------~~~il  110 (188)
                      ...+++|||+.++.+.++.  .....++ .|++.+|.+||+.+       |.||+
T Consensus       184 ~~~~LVME~i~G~~L~~l~~~~~~~~l~-~qll~~l~~lH~~gIVHrDLKp~NIL  237 (397)
T 4gyi_A          184 SRHTIVMSLVDALPMRQVSSVPDPASLY-ADLIALILRLAKHGLIHGDFNEFNIL  237 (397)
T ss_dssp             ETTEEEEECCSCEEGGGCCCCSCHHHHH-HHHHHHHHHHHHTTEECSCCSTTSEE
T ss_pred             cCceEEEEecCCccHhhhcccHHHHHHH-HHHHHHHHHHHHCCCcCCCCCHHHEE
Confidence            3458999999998887651  2334566 79999999999998       77885

>3tm0_A Aminoglycoside 3'-phosphotransferase; protein kinase, phosphorylation, transferase-antibiotic COMP; HET: ANP B31; 2.10A {Enterococcus faecalis} SCOP: d.144.1.6 PDB: 2b0q_A* 1l8t_A* 3q2j_A* 1j7i_A* 1j7u_A* 3h8p_A* 1j7l_A* 2bkk_A*

Probab=96.81  E-value=0.0019  Score=48.27  Aligned_cols=70  Identities=7%  Similarity=-0.042  Sum_probs=52.2

Q ss_pred             hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH---HHHHHHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF---YSHLRYLENQQILEGLQAL  101 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~---~~~~~~~~~~qi~~gl~~l  101 (188)
                      .....+.+|+++++.+. +..+.++++++        .++...+++||+++|.++...   ......+. .+++++|..|
T Consensus        51 ~~~~~~~~E~~~l~~l~~~~~vP~v~~~~--------~~~~~~~lv~e~i~G~~l~~~~~~~~~~~~~~-~~l~~~l~~L  121 (263)
T 3tm0_A           51 GTTYDVEREKDMMLWLEGKLPVPKVLHFE--------RHDGWSNLLMSEADGVLCSEEYEDEQSPEKII-ELYAECIRLF  121 (263)
T ss_dssp             TSTTCHHHHHHHHHHHTTTSCCCCEEEEE--------EETTEEEEEEECCSSEEHHHHCCTTTCHHHHH-HHHHHHHHHH
T ss_pred             CCHHHHHHHHHHHHHHhcCCCCCeEEEEE--------ecCCceEEEEEecCCeehhhccCCcccHHHHH-HHHHHHHHHH
Confidence            33457899999999985 66677787763        234578999999999998764   22233455 6999999999


Q ss_pred             hhc
Q psy7174         102 KSS  104 (188)
Q Consensus       102 H~~  104 (188)
                      |+.
T Consensus       122 H~~  124 (263)
T 3tm0_A          122 HSI  124 (263)
T ss_dssp             HHS
T ss_pred             hCC
Confidence            993

>1nd4_A Aminoglycoside 3'-phosphotransferase; protein kinase, ATPase, kanamycin; HET: KAN; 2.10A {Klebsiella pneumoniae} SCOP: d.144.1.6

Probab=94.96  E-value=0.016  Score=42.70  Aligned_cols=69  Identities=7%  Similarity=0.004  Sum_probs=47.8

Q ss_pred             hhhHHHHHHHHHHhCCCCC--eeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-HHHHHHHHHHHHHHHHHHhh
Q psy7174          27 VETQAKAEGKQDRRLDYAN--IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-SHLRYLENQQILEGLQALKS  103 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~n--iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-~~~~~~~~~qi~~gl~~lH~  103 (188)
                      ....+.+|+++++.+.+.+  +.+++++.        ..+...+++||+++|.++. .. ....... .++++.|..||+
T Consensus        56 ~~~~~~~E~~~l~~l~~~~~~vP~~~~~~--------~~~~~~~~v~e~i~G~~l~-~~~~~~~~~~-~~l~~~l~~lh~  125 (264)
T 1nd4_A           56 ALNELQDEAARLSWLATTGVPCAAVLDVV--------TEAGRDWLLLGEVPGQDLL-SSHLAPAEKV-SIMADAMRRLHT  125 (264)
T ss_dssp             TTSCHHHHHHHHHHHHTTTCCBCCEEEEE--------ECSSCEEEEEECCSSEETT-TSCCCHHHHH-HHHHHHHHHHTT
T ss_pred             cchhhhHHHHHHHHHHhCCCCCCeEEEec--------cCCCCCEEEEEecCCcccC-cCcCCHhHHH-HHHHHHHHHHhC
Confidence            3466889999999986544  44566653        2335679999999998885 21 1112345 688999999998


Q ss_pred             cC
Q psy7174         104 SM  105 (188)
Q Consensus       104 ~~  105 (188)
                      ..
T Consensus       126 ~~  127 (264)
T 1nd4_A          126 LD  127 (264)
T ss_dssp             SC
T ss_pred             CC
Confidence            64

>3dxp_A Putative acyl-COA dehydrogenase; protein kinase-like fold, structural genomics, joint center structural genomics, JCSG; 2.32A {Ralstonia eutropha JMP134}

Probab=92.52  E-value=0.25  Score=38.46  Aligned_cols=71  Identities=6%  Similarity=0.040  Sum_probs=48.5

Q ss_pred             hhHHHHHHHHHHhCC--CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH-----H-HHHHHHHHHHHHHHHHH
Q psy7174          28 ETQAKAEGKQDRRLD--YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR-----F-YSHLRYLENQQILEGLQ   99 (188)
Q Consensus        28 ~~~~~~E~~il~~l~--h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~-----~-~~~~~~~~~~qi~~gl~   99 (188)
                      ...+.+|.++++.+.  +..+.+++.++..     .......+++||++.|..+..     + ......+. .+++..|.
T Consensus        80 ~~~~~~E~~~l~~L~~~~vpvP~~~~~~~~-----~~~~g~~~~vme~v~G~~l~~~~~~~l~~~~~~~~~-~~l~~~La  153 (359)
T 3dxp_A           80 AHAIEREYRVMDALAGTDVPVAKMYALCED-----ESVIGRAFYIMEFVSGRVLWDQSLPGMSPAERTAIY-DEMNRVIA  153 (359)
T ss_dssp             --CHHHHHHHHHHHTTSSSCCCCEEEEECC-----TTTTSSCEEEEECCCCBCCCCTTCTTCCHHHHHHHH-HHHHHHHH
T ss_pred             HHHHHHHHHHHHHhhcCCCCCCcEEEECCC-----CCccCCeEEEEEecCCeecCCCccccCCHHHHHHHH-HHHHHHHH
Confidence            457889999999997  4456777776411     011145799999999887742     1 23344556 79999999


Q ss_pred             HHhhc
Q psy7174         100 ALKSS  104 (188)
Q Consensus       100 ~lH~~  104 (188)
                      .||+.
T Consensus       154 ~LH~~  158 (359)
T 3dxp_A          154 AMHTV  158 (359)
T ss_dssp             HHHHS
T ss_pred             HHhCC
Confidence            99985

>4gkh_A Aminoglycoside 3'-phosphotransferase APHA1-IAB; pyrazolopyrimidine, 1-Na-PP1, bumped kinase inhibitor, BKI, kinase inhibitor; HET: KAN 0J9; 1.86A {Acinetobacter baumannii} PDB: 4feu_A* 4few_A* 4fex_A* 4fev_A* 4gki_A* 4ej7_A* 3r78_A*

Probab=89.17  E-value=0.91  Score=33.51  Aligned_cols=71  Identities=10%  Similarity=0.061  Sum_probs=48.3

Q ss_pred             hhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH----HHHHHHHHHHHHHHHHH
Q psy7174          26 NVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY----SHLRYLENQQILEGLQA  100 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~----~~~~~~~~~qi~~gl~~  100 (188)
                      .....+.+|...|+.+. +--+-++++++        .++...+++||++++.++....    .....+. .++...|.-
T Consensus        61 ~~~~~~~~E~~~l~~l~~~vPVP~v~~~~--------~~~~~~~lvme~l~G~~~~~~~~~~~~~~~~~~-~~l~~~L~~  131 (272)
T 4gkh_A           61 SVANDVTDEMVRLNWLTAFMPLPTIKHFI--------RTPDDAWLLTTAIPGKTAFQVLEEYPDSGENIV-DALAVFLRR  131 (272)
T ss_dssp             HHHHHHHHHHHHHHHHTTTSCCCCEEEEE--------EETTEEEEEEECCCSEEHHHHHHHCGGGHHHHH-HHHHHHHHH
T ss_pred             CCHhHHHHHHHHHHHhccCCCcCeEEEEE--------EECCeEEEEEEeeCCccccccccCCHHHHHHHH-HHHHHHHHH
Confidence            34556889999998886 22244445542        2345789999999999887642    1233455 688899999


Q ss_pred             HhhcC
Q psy7174         101 LKSSM  105 (188)
Q Consensus       101 lH~~~  105 (188)
                      ||+..
T Consensus       132 Lh~~~  136 (272)
T 4gkh_A          132 LHSIP  136 (272)
T ss_dssp             HHTSC
T ss_pred             hcCCC
Confidence            99864

>3tdw_A Gentamicin resistance protein; kinase, phosphoryl transfer, antibiotic resistance, transfer; HET: GDP; 1.70A {Enterococcus gallinarum} PDB: 3tdv_A*

Probab=86.49  E-value=3  Score=31.62  Aligned_cols=71  Identities=14%  Similarity=-0.012  Sum_probs=47.8

Q ss_pred             hhhHHHHHHHHHHhCCCCC---eeEEeeecccccCCCCCCCCccEEEEeccccccHHHH------HHHHHHHHHHHHHHH
Q psy7174          27 VETQAKAEGKQDRRLDYAN---IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF------YSHLRYLENQQILEG   97 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~n---iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~------~~~~~~~~~~qi~~g   97 (188)
                      ....+.+|.++|+.+.+..   +.+.+.+.      . ..+...+++||+++|..+...      ......+. .++...
T Consensus        52 ~~~~~~~E~~~L~~L~~~~~v~VP~~~~~~------~-~~~g~~~~v~e~i~G~~l~~~~~~~l~~~~~~~~~-~~lg~~  123 (306)
T 3tdw_A           52 GADELNKEIQLLPLLVGCVKVNIPQYVYIG------K-RSDGNPFVGYRKVQGQILGEDGMAVLPDDAKDRLA-LQLAEF  123 (306)
T ss_dssp             HHHHHHHHHHHHHHHTTTCSSBCCCEEEEE------E-CTTSCEEEEEECCCSEECHHHHHTTSCHHHHHHHH-HHHHHH
T ss_pred             HHHHHHHHHHHHHHHHhcCCCCCCCeEeec------c-cCCCceEEEEeccCCeECchhhhhhCCHHHHHHHH-HHHHHH
Confidence            4567889999999997521   33333331      0 224567899999999988652      12334455 688999


Q ss_pred             HHHHhhcC
Q psy7174          98 LQALKSSM  105 (188)
Q Consensus        98 l~~lH~~~  105 (188)
                      |..||+..
T Consensus       124 La~LH~~~  131 (306)
T 3tdw_A          124 MNELSAFP  131 (306)
T ss_dssp             HHHHHHSC
T ss_pred             HHHHhcCC
Confidence            99999865

>3oja_A Leucine-rich immune molecule 1; coiled-coil, helix-loop-helix, leucine-rich repeat, protein; HET: NAG MAN; 2.70A {Anopheles gambiae}

Probab=80.40  E-value=0.097  Score=42.90  Aligned_cols=28  Identities=7%  Similarity=-0.050  Sum_probs=23.6

Q ss_pred             hhhHHHHHHHHHHhCCCCCeeEEeeecc
Q psy7174          27 VETQAKAEGKQDRRLDYANIIQYLSLPV   54 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~h~niv~~~~~~~   54 (188)
                      ..++|.+|++.+.+++|+|+|++.|+|.
T Consensus       322 g~~eF~~Eve~L~~i~HrNLV~L~gyC~  349 (487)
T 3oja_A          322 GSETERLECERENQARQREIDALKEQYR  349 (487)
T ss_dssp             ---CHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHHHhcccccchhhHHHHhc
Confidence            3567999999999999999999999973

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	188
d1ua2a_	299	d.144.1.7 (A:) Cell division protein kinase 7, CDK	4e-16
d1gz8a_	298	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (H	2e-13
d1q5ka_	350	d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gs	7e-13
d2gfsa1	348	d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sa	3e-12
d1ob3a_	286	d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmod	4e-12
d3blha1	318	d.144.1.7 (A:8-325) Cell division protein kinase 9	6e-12
d1unla_	292	d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (H	7e-12
d1cm8a_	346	d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo s	2e-10
d1blxa_	305	d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (H	3e-10
d3bqca1	328	d.144.1.7 (A:3-330) Protein kinase CK2, alpha subu	5e-09
d1pmea_	345	d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapien	9e-09
d1koaa2	350	d.144.1.7 (A:5915-6264) Twitchin, kinase domain {C	2e-08
d1koba_	352	d.144.1.7 (A:) Twitchin, kinase domain {California	3e-08
d1nvra_	271	d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {	4e-08
d1s9ja_	322	d.144.1.7 (A:) Dual specificity mitogen-activated	6e-08
d1tkia_	321	d.144.1.7 (A:) Titin, kinase domain {Human (Homo s	3e-07
d1jksa_	293	d.144.1.7 (A:) Death-associated protein kinase, Da	3e-07
d2b1pa1	355	d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3	5e-07
d1o6ya_	277	d.144.1.7 (A:) Mycobacterial protein kinase PknB,	5e-07
d1a06a_	307	d.144.1.7 (A:) Calmodulin-dependent protein kinase	6e-07
d2j4za1	263	d.144.1.7 (A:126-388) Aurora-related kinase 1 (aur	9e-07
d1uu3a_	288	d.144.1.7 (A:) 3-phosphoinositide dependent protei	1e-06
d1phka_	277	d.144.1.7 (A:) gamma-subunit of glycogen phosphory	2e-06
d2java1	269	d.144.1.7 (A:3-271) Serine/threonine-protein kinas	4e-06
d1yhwa1	293	d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [	6e-06
d1vzoa_	322	d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5	3e-05
d2jfla1	288	d.144.1.7 (A:21-308) STE20-like serine/threonine-p	4e-05
d1q8ya_	362	d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces	5e-05
d1csna_	293	d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast	6e-05
d1u5ra_	309	d.144.1.7 (A:) Serine/threonine protein kinase TAO	1e-04
d1xjda_	320	d.144.1.7 (A:) Protein kinase C, theta type {Human	1e-04
d1byga_	262	d.144.1.7 (A:) Carboxyl-terminal src kinase (csk)	2e-04
d2ozaa1	335	d.144.1.7 (A:51-385) MAP kinase activated protein	4e-04
d1xwsa_	273	d.144.1.7 (A:) Proto-oncogene serine/threonine-pro	4e-04
d1fmka3	285	d.144.1.7 (A:249-533) c-src tyrosine kinase {Human	5e-04
d1t4ha_	270	d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sa	5e-04
d1fota_	316	d.144.1.7 (A:) cAMP-dependent PK, catalytic subuni	6e-04
d1ckia_	299	d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus n	0.001
d1uwha_	276	d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens)	0.002
d1xbba_	277	d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human	0.003
d1r0pa_	311	d.144.1.7 (A:) Hepatocyte growth factor receptor,	0.003
d1rdqe_	350	d.144.1.7 (E:) cAMP-dependent PK, catalytic subuni	0.003
d1omwa3	364	d.144.1.7 (A:186-549) G-protein coupled receptor k	0.003

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.2 bits (176), Expect = 4e-16
 Identities = 68/186 (36%), Positives = 90/186 (48%), Gaps = 24/186 (12%)

Query: 26  NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH 85
            +   A  E K  + L + NII  L         + +    +  +  I    +     SH
Sbjct: 42  GINRTALREIKLLQELSHPNIIGLLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSH 101

Query: 86  LRYLENQQILEGLQALKSSMPAL--LK------------KFVGIGIGRHVCTLYCTRG-- 129
           ++       L+GL+ L         LK            K    G+ +   +        
Sbjct: 102 IKAY-MLMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQ 160

Query: 130 -------APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
                  APELLFGARMYGVG+DMWAVGCI+ ELLL+ PFLPG+SDLDQLTRIF+TLGTP
Sbjct: 161 VVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTP 220

Query: 183 SEDTWP 188
           +E+ WP
Sbjct: 221 TEEQWP 226

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]} Length = 298

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.9 bits (157), Expect = 2e-13
 Identities = 47/186 (25%), Positives = 74/186 (39%), Gaps = 23/186 (12%)

Query: 26  NVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSH 85
            V + A  E    + L++ NI++ L +     +   +       + K    +        
Sbjct: 43  GVPSTAIREISLLKELNHPNIVKLLDVIHTENKLYLVFEFLHQDLKKFMDASALTGIPLP 102

Query: 86  LRYLENQQILEGLQALKSSM--------------PALLKKFVGIGIGRHV------CTLY 125
           L      Q+L+GL    S                     K    G+ R         T  
Sbjct: 103 LIKSYLFQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHE 162

Query: 126 CTRG---APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP 182
                  APE+L G + Y   +D+W++GCI  E++ +    PG+S++DQL RIF+TLGTP
Sbjct: 163 VVTLWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTP 222

Query: 183 SEDTWP 188
            E  WP
Sbjct: 223 DEVVWP 228

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.3 bits (153), Expect = 7e-13
 Identities = 50/181 (27%), Positives = 78/181 (43%), Gaps = 31/181 (17%)

Query: 39  RRLDYANIIQ---------------YLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY 83
           R+LD+ NI++               YL+L ++ +  T    +  Y   K        + Y
Sbjct: 68  RKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLY 127

Query: 84  SH-----LRYLENQQILEG---LQALKSSMPALLKKFVGIGIGRHV------CTLYCTRG 129
            +     L Y+ +  I       Q L       + K    G  + +       +  C+R 
Sbjct: 128 MYQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY 187

Query: 130 --APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW 187
             APEL+FGA  Y   ID+W+ GC++ ELLL  P  PG+S +DQL  I + LGTP+ +  
Sbjct: 188 YRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTREQI 247

Query: 188 P 188
            
Sbjct: 248 R 248

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]} Length = 348

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.8 bits (149), Expect = 3e-12
 Identities = 38/185 (20%), Positives = 66/185 (35%), Gaps = 29/185 (15%)

Query: 30  QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYL 89
           +   E +  + + + N+I  L +        +L   +D  +V               +  
Sbjct: 63  RTYRELRLLKHMKHENVIGLLDVFTP---ARSLEEFNDVYLVTHLMGADLNNIVKCQKLT 119

Query: 90  ENQ------QILEGLQALKS------------------SMPALLKKFVGIGIGRHVCTLY 125
           ++       QIL GL+ + S                      +L   +       +    
Sbjct: 120 DDHVQFLIYQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYV 179

Query: 126 CTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
            TR   APE++     Y   +D+W+VGCI+ ELL      PG   +DQL  I + +GTP 
Sbjct: 180 ATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPG 239

Query: 184 EDTWP 188
            +   
Sbjct: 240 AELLK 244

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]} Length = 286

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

 Score = 61.1 bits (147), Expect = 4e-12
 Identities = 45/193 (23%), Positives = 78/193 (40%), Gaps = 24/193 (12%)

Query: 19  PMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT 78
            + + D  + +    E    + L ++NI++   + + T +   L        +K      
Sbjct: 35  RLEKEDEGIPSTTIREISILKELKHSNIVKLYDV-IHTKKRLVLVFEHLDQDLKKLLDVC 93

Query: 79  KARFYSHLRYLENQQILEGLQAL----------KSSMPAL------------LKKFVGIG 116
           +    S        Q+L G+             K     +            L +  GI 
Sbjct: 94  EGGLESVTAKSFLLQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIP 153

Query: 117 IGRHVCTLYCTRG-APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 175
           + ++   +      AP++L G++ Y   ID+W+VGCI  E++   P  PG S+ DQL RI
Sbjct: 154 VRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRI 213

Query: 176 FQTLGTPSEDTWP 188
           F+ LGTP+   WP
Sbjct: 214 FRILGTPNSKNWP 226

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]} Length = 318

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.7 bits (146), Expect = 6e-12
 Identities = 40/203 (19%), Positives = 64/203 (31%), Gaps = 34/203 (16%)

Query: 20  MARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK 79
           M          A  E K  + L + N++  + +      P      S Y+V         
Sbjct: 45  MENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLA 104

Query: 80  ARFYSHLRYLEN-------QQILEGLQALKSS-------MPAL---------------LK 110
               + L            Q +L GL  +  +         A                L 
Sbjct: 105 GLLSNVLVKFTLSEIKRVMQMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLA 164

Query: 111 KFVGIGIGRHVCTLYCTRGAP-----ELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG 165
           +   +                     ELL G R YG  ID+W  GCI+ E+  ++P + G
Sbjct: 165 RAFSLAKNSQPNRYTNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQG 224

Query: 166 ESDLDQLTRIFQTLGTPSEDTWP 188
            ++  QL  I Q  G+ + + WP
Sbjct: 225 NTEQHQLALISQLCGSITPEVWP 247

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]} Length = 292

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.4 bits (145), Expect = 7e-12
 Identities = 54/191 (28%), Positives = 79/191 (41%), Gaps = 29/191 (15%)

Query: 24  DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY 83
           D  V + A  E    + L + NI++   +     + T +    D  + K F         
Sbjct: 41  DEGVPSSALREICLLKELKHKNIVRLHDVLHSDKKLTLVFEFCDQDLKKYFDSCNGDLDP 100

Query: 84  SHLRYLENQQILEGLQA----------LKSSMPALLK----KFVGIGIGR---------- 119
             ++     Q+L+GL            LK     + +    K    G+ R          
Sbjct: 101 EIVKSF-LFQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYS 159

Query: 120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQ 177
             V TL+     P++LFGA++Y   IDMW+ GCI  EL     P  PG    DQL RIF+
Sbjct: 160 AEVVTLWYR--PPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFR 217

Query: 178 TLGTPSEDTWP 188
            LGTP+E+ WP
Sbjct: 218 LLGTPTEEQWP 228

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]} Length = 346

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.4 bits (135), Expect = 2e-10
 Identities = 40/185 (21%), Positives = 73/185 (39%), Gaps = 29/185 (15%)

Query: 30  QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYL 89
           +A  E +  + + + N+I  L +        TL   +D+ +V  F  T   +   H +  
Sbjct: 63  RAYRELRLLKHMRHENVIGLLDVFTP---DETLDDFTDFYLVMPFMGTDLGKLMKHEKLG 119

Query: 90  ENQ------QILEGLQALKSS--------------MPALLKKFVGIGIGRHVCTLYCTRG 129
           E++      Q+L+GL+ + ++                    K +  G+ R   +      
Sbjct: 120 EDRIQFLVYQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYV 179

Query: 130 ------APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS 183
                 APE++     Y   +D+W+VGCI+ E++       G   LDQL  I +  GTP 
Sbjct: 180 VTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPP 239

Query: 184 EDTWP 188
            +   
Sbjct: 240 AEFVQ 244

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.7 bits (133), Expect = 3e-10
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 3/72 (4%)

Query: 119 RHVCTLYCTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF 176
             + ++  T    APE+L  +  Y   +D+W+VGCI  E+  + P   G SD+DQL +I 
Sbjct: 170 MALTSVVVTLWYRAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKIL 228

Query: 177 QTLGTPSEDTWP 188
             +G P E+ WP
Sbjct: 229 DVIGLPGEEDWP 240

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]} Length = 328

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

 Score = 52.2 bits (124), Expect = 5e-09
 Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 3/70 (4%)

Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT 178
            V + Y     PELL   +MY   +DMW++GC++  ++  K PF  G  + DQL RI + 
Sbjct: 189 RVASRYFKG--PELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKV 246

Query: 179 LGTPSEDTWP 188
           LGT     + 
Sbjct: 247 LGTEDLYDYI 256

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]} Length = 345

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.4 bits (122), Expect = 9e-09
 Identities = 25/59 (42%), Positives = 37/59 (62%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE++  ++ Y   ID+W+VGCI+ E+L   P  PG+  LDQL  I   LG+PS++   
Sbjct: 180 APEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPSQEDLN 238

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

 Score = 50.8 bits (121), Expect = 2e-08
 Identities = 16/59 (27%), Positives = 25/59 (42%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+  G +  G   DMW+VG +   LL       GE+D + L  +        +  + 
Sbjct: 193 APEVAEG-KPVGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDDSAFS 250

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]} Length = 352

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

 Score = 50.1 bits (119), Expect = 3e-08
 Identities = 18/59 (30%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE++      G   DMWA+G +   LL       GE DL+ L  + +      ED + 
Sbjct: 196 APEIVDR-EPVGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAFS 253

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 271

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 49.2 bits (117), Expect = 4e-08
 Identities = 16/80 (20%), Positives = 26/80 (32%), Gaps = 3/80 (3%)

Query: 109 LKKFVGIGIGRHVCTLYC-TRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPG 165
           L           +    C T    APELL     +   +D+W+ G ++  +L        
Sbjct: 149 LATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQ 208

Query: 166 ESDLDQLTRIFQTLGTPSED 185
            SD  Q    ++   T    
Sbjct: 209 PSDSCQEYSDWKEKKTYLNP 228

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.9 bits (116), Expect = 6e-08
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 2/56 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSE 184
           +PE L G   Y V  D+W++G  + E+ + + P  P ++   +L    Q  G  +E
Sbjct: 171 SPERLQG-THYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAE 225

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]} Length = 321

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.3 bits (112), Expect = 3e-07
 Identities = 12/75 (16%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 115 IGIGRHVCTLYCTRG-APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLT 173
           +  G +   L+         +    +     DMW++G ++  LL        E++   + 
Sbjct: 154 LKPGDNFRLLFTAPEYYAPEVHQHDVVSTATDMWSLGTLVYVLLSGINPFLAETNQQIIE 213

Query: 174 RIFQTLGTPSEDTWP 188
            I     T  E+ + 
Sbjct: 214 NIMNAEYTFDEEAFK 228

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (111), Expect = 3e-07
 Identities = 14/59 (23%), Positives = 26/59 (44%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE++      G+  DMW++G I   LL  A    G++  + L  +        ++ + 
Sbjct: 184 APEIVNY-EPLGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVNYEFEDEYFS 241

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]} Length = 355

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.5 bits (109), Expect = 5e-07
 Identities = 22/69 (31%), Positives = 36/69 (52%), Gaps = 3/69 (4%)

Query: 120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL 179
           +V T Y    APE++ G       +D+W+VGCI+ E++      PG   +DQ  ++ + L
Sbjct: 178 YVVTRYYR--APEVILGMGYKE-NVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQL 234

Query: 180 GTPSEDTWP 188
           GTP  +   
Sbjct: 235 GTPCPEFMK 243

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 46.3 bits (109), Expect = 5e-07
 Identities = 24/198 (12%), Positives = 53/198 (26%), Gaps = 38/198 (19%)

Query: 24  DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY 83
           D +   + + E +    L++  I+       +T +  T +    YIV++     T     
Sbjct: 47  DPSFYLRFRREAQNAAALNHPAIVAVY----DTGEAETPAGPLPYIVMEYVDGVTLRDIV 102

Query: 84  SHLRYLENQ-------QILEGLQALKSS-----------------MPALLKKFVGIGIGR 119
                +  +          + L     +                     +  F       
Sbjct: 103 HTEGPMTPKRAIEVIADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIA 162

Query: 120 HVCTLYCTRG---------APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLD 170
                              +PE   G        D++++GC++ E+L   P   G+S + 
Sbjct: 163 DSGNSVTQTAAVIGTAQYLSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVS 221

Query: 171 QLTRIFQTLGTPSEDTWP 188
              +  +    P      
Sbjct: 222 VAYQHVREDPIPPSARHE 239

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 46.2 bits (109), Expect = 6e-07
 Identities = 16/59 (27%), Positives = 24/59 (40%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE+L   + Y   +D W++G I   LL   P    E+D     +I +         W 
Sbjct: 177 APEVLAQ-KPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYWD 234

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]} Length = 263

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (107), Expect = 9e-07
 Identities = 35/190 (18%), Positives = 61/190 (32%), Gaps = 37/190 (19%)

Query: 24  DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY 83
              VE Q + E +    L + NI++                +  Y++++     T  R  
Sbjct: 46  KAGVEHQLRREVEIQSHLRHPNILRLYG--------YFHDATRVYLILEYAPLGTVYREL 97

Query: 84  SHLRYLENQ-------QILEGLQALKSS--------------MPALLKKFVGIGIGRHV- 121
             L   + Q       ++   L    S                 A   K    G   H  
Sbjct: 98  QKLSKFDEQRTATYITELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP 157

Query: 122 ----CTLYCTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 175
                TL  T     PE++ G RM+   +D+W++G +  E L+  P     +  +   RI
Sbjct: 158 SSRRTTLCGTLDYLPPEMIEG-RMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRI 216

Query: 176 FQTLGTPSED 185
            +   T  + 
Sbjct: 217 SRVEFTFPDF 226

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.0 bits (106), Expect = 1e-06
 Identities = 16/59 (27%), Positives = 27/59 (45%), Gaps = 1/59 (1%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           +PELL   +      D+WA+GCII +L+   P     ++     +I +      E  +P
Sbjct: 178 SPELLTE-KSACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKLEYDFPEKFFP 235

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 44.7 bits (105), Expect = 2e-06
 Identities = 16/64 (25%), Positives = 24/64 (37%), Gaps = 5/64 (7%)

Query: 130 APELLFGARM-----YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 184
           APE++  +       YG  +DMW+ G I+  LL  +P       +  L  I         
Sbjct: 177 APEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNYQFGS 236

Query: 185 DTWP 188
             W 
Sbjct: 237 PEWD 240

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]} Length = 269

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.4 bits (102), Expect = 4e-06
 Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 16/122 (13%)

Query: 69  IVVKIFTKTTKARFYSHLRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRHVC-- 122
            V+++ T+ T A    H R      +L   + LK +   L      K    G+ R +   
Sbjct: 110 FVLRVMTQLTLALKECHRRSDGGHTVLH--RDLKPANVFLDGKQNVKLGDFGLARILNHD 167

Query: 123 -----TLYCTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 175
                    T    +PE +     Y    D+W++GC++ EL    P     S  +   +I
Sbjct: 168 TSFAKAFVGTPYYMSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKI 226

Query: 176 FQ 177
            +
Sbjct: 227 RE 228

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.1 bits (101), Expect = 6e-06
 Identities = 17/59 (28%), Positives = 28/59 (47%), Gaps = 2/59 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE++   + YG  +D+W++G +  E++   P    E+ L  L  I    GTP      
Sbjct: 184 APEVVTR-KAYGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN-GTPELQNPE 240

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 322

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.4 bits (96), Expect = 3e-05
 Identities = 9/58 (15%), Positives = 21/58 (36%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
             +  G   +   +D W++G ++ ELL  A     + + +    I + +         
Sbjct: 200 DIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEISRRILKSEPPYPQ 257

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]} Length = 288

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 4/52 (7%)

Query: 130 APELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 177
           APE++       R Y    D+W++G  + E+    P     + +  L +I +
Sbjct: 178 APEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAK 229

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 362

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (94), Expect = 5e-05
 Identities = 23/106 (21%), Positives = 38/106 (35%), Gaps = 10/106 (9%)

Query: 89  LENQQILEGLQALKSSMPALLKKFVGIGIGRHVCTLYCTRGAPELLFGARMYGVGIDMWA 148
           +E     E L  +K +       +            Y    +PE+L GA  +G G D+W+
Sbjct: 159 MEIVDSPENLIQIKIADLGNACWYDEHYTNSIQTREYR---SPEVLLGAP-WGCGADIWS 214

Query: 149 VGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTPSEDTWP 188
             C+I EL+        +       D D + +I + LG        
Sbjct: 215 TACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELPSYLLR 260

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]} Length = 293

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

 Score = 40.2 bits (93), Expect = 6e-05
 Identities = 7/48 (14%), Positives = 14/48 (29%), Gaps = 1/48 (2%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 177
           +     G R      D+ A+G +    L  +    G        +  +
Sbjct: 181 SINTHLG-REQSRRDDLEALGHVFMYFLRGSLPWQGLKAATNKQKYER 227

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 309

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 22/103 (21%), Positives = 39/103 (37%), Gaps = 13/103 (12%)

Query: 86  LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRHVCTLYCTRG-----APELLFG 136
           L YL +  ++   + +K+    L +    K    G    +       G     APE++  
Sbjct: 128 LAYLHSHNMI--HRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYWMAPEVILA 185

Query: 137 ARM--YGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ 177
                Y   +D+W++G    EL  + P L   + +  L  I Q
Sbjct: 186 MDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQ 228

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]} Length = 320

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 13/46 (28%), Positives = 24/46 (52%), Gaps = 1/46 (2%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRI 175
           APE+L G + Y   +D W+ G ++ E+L+      G+ + +    I
Sbjct: 171 APEILLG-QKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSI 215

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 262

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (90), Expect = 2e-04
 Identities = 29/175 (16%), Positives = 60/175 (34%), Gaps = 28/175 (16%)

Query: 39  RRLDYANIIQYLSLPVETLQPTTL-------STSSDYIVVKIFTKTT--KARFYSH---- 85
            +L ++N++Q L + VE      +        +  DY+  +  +         +S     
Sbjct: 55  TQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVLGGDCLLKFSLDVCE 114

Query: 86  -LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGRHVCTLYCTR------GAPELL 134
            + YLE    +     L +    + +    K    G+ +   +   T        APE L
Sbjct: 115 AMEYLEGNNFVHRD--LAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEAL 172

Query: 135 FGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
              + +    D+W+ G ++ E+        P     D + R+ +     + D  P
Sbjct: 173 RE-KKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP 226

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]} Length = 335

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 26/125 (20%), Positives = 41/125 (32%), Gaps = 19/125 (15%)

Query: 66  SDYIVVKIFTKTTKARFYSHL-----RYLENQQILEGLQALKSSMPALLKKFVGIGIGRH 120
           ++    +I     +A  Y H      R ++ + +L       S  P  + K    G  + 
Sbjct: 109 TEREASEIMKSIGEAIQYLHSINIAHRDVKPENLL-----YTSKRPNAILKLTDFGFAKE 163

Query: 121 V------CTLYCTRG--APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL 172
                   T   T    APE+L     Y    DMW++G I+  LL   P       L   
Sbjct: 164 TTSHNSLTTPCYTPYYVAPEVLGP-EKYDKSCDMWSLGVIMYILLCGYPPFYSNHGLAIS 222

Query: 173 TRIFQ 177
             +  
Sbjct: 223 PGMKT 227

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 273

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 7/47 (14%), Positives = 21/47 (44%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF 176
            PE +   R +G    +W++G ++ +++        + ++ +    F
Sbjct: 177 PPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHDEEIIRGQVFF 223

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (86), Expect = 5e-04
 Identities = 14/60 (23%), Positives = 25/60 (41%), Gaps = 2/60 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           APE     R + +  D+W+ G ++ EL        PG  + + L ++ +    P     P
Sbjct: 182 APEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP 240

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]} Length = 270

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (86), Expect = 5e-04
 Identities = 11/55 (20%), Positives = 21/55 (38%), Gaps = 2/55 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 184
           APE+      Y   +D++A G  + E+           +  Q+ R   +   P+ 
Sbjct: 181 APEMYEEK--YDESVDVYAFGMCMLEMATSEYPYSECQNAAQIYRRVTSGVKPAS 233

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 316

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.4 bits (86), Expect = 6e-04
 Identities = 16/73 (21%), Positives = 28/73 (38%), Gaps = 7/73 (9%)

Query: 111 KFVGIGIGRHVCTLYCTRG------APELLFGARMYGVGIDMWAVGCIICELLLKAPFLP 164
           K    G  ++V  +  T        APE++   + Y   ID W+ G +I E+L       
Sbjct: 144 KITDFGFAKYVPDVTYTLCGTPDYIAPEVVST-KPYNKSIDWWSFGILIYEMLAGYTPFY 202

Query: 165 GESDLDQLTRIFQ 177
             + +    +I  
Sbjct: 203 DSNTMKTYEKILN 215

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 299

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 36.0 bits (82), Expect = 0.001
 Identities = 8/63 (12%), Positives = 19/63 (30%), Gaps = 5/63 (7%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT----LGTPSED 185
           +     G        D+ ++G ++    L +    G     +  +  +     + TP E 
Sbjct: 181 SINTHLG-IEQSRRDDLESLGYVLMYFNLGSLPWQGLKAATKRQKYERISEKKMSTPIEV 239

Query: 186 TWP 188
              
Sbjct: 240 LCK 242

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 276

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (81), Expect = 0.002
 Identities = 14/72 (19%), Positives = 26/72 (36%), Gaps = 5/72 (6%)

Query: 109 LKKFVGIGIGRHVCTLYC-TRG--APELLFG--ARMYGVGIDMWAVGCIICELLLKAPFL 163
           L        G H       +    APE++       Y    D++A G ++ EL+      
Sbjct: 150 LATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPY 209

Query: 164 PGESDLDQLTRI 175
              ++ DQ+  +
Sbjct: 210 SNINNRDQIIFM 221

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]} Length = 277

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 29/196 (14%), Positives = 62/196 (31%), Gaps = 38/196 (19%)

Query: 24  DVNVETQAKAEGKQDRRLDYANIIQYLS--------LPVETLQPTTLSTSSDYIVVKIFT 75
           D  ++ +  AE    ++LD   I++ +         L +E  +   L+    Y+      
Sbjct: 48  DPALKDELLAEANVMQQLDNPYIVRMIGICEAESWMLVMEMAELGPLN---KYLQQNRHV 104

Query: 76  KTTKARFYSH-----LRYLENQQILEGLQALKSSMPALLK----KFVGIGIGR------- 119
           K        H     ++YLE    +     L +    L+     K    G+ +       
Sbjct: 105 KDKNIIELVHQVSMGMKYLEESNFVHR--DLAARNVLLVTQHYAKISDFGLSKALRADEN 162

Query: 120 HVCTLYCTRG-----APELLFGARMYGVGIDMWAVGCIICELLL--KAPFLPGESDLDQL 172
           +       +      APE +   + +    D+W+ G ++ E     + P+  G    +  
Sbjct: 163 YYKAQTHGKWPVKWYAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPY-RGMKGSEVT 220

Query: 173 TRIFQTLGTPSEDTWP 188
             + +          P
Sbjct: 221 AMLEKGERMGCPAGCP 236

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]} Length = 311

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 14/60 (23%), Positives = 23/60 (38%), Gaps = 2/60 (3%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELL-LKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           A E L   +      D+W+ G ++ EL+   AP  P  +  D    + Q       +  P
Sbjct: 202 ALESLQTQKFT-TKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP 260

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]} Length = 350

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.2 bits (80), Expect = 0.003
 Identities = 11/58 (18%), Positives = 21/58 (36%), Gaps = 1/58 (1%)

Query: 131 PELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP 188
           PE++   + Y   +D WA+G +I E+    P    +  +    +I             
Sbjct: 207 PEIILS-KGYNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKVRFPSHFSS 263

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]} Length = 364

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 35.1 bits (80), Expect = 0.003
 Identities = 14/55 (25%), Positives = 22/55 (40%)

Query: 130 APELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE 184
           APE+L     Y    D +++GC++ +LL            D+      TL    E
Sbjct: 173 APEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMTLTMAVE 227

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	188
d1yhwa1	293	pak1 {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1ua2a_	299	Cell division protein kinase 7, CDK7 {Human (Homo	100.0
d2j4za1	263	Aurora-related kinase 1 (aurora-2) {Human (Homo sa	100.0
d1a06a_	307	Calmodulin-dependent protein kinase {Rat (Rattus n	100.0
d2java1	269	Serine/threonine-protein kinase Nek2 {Human (Homo	100.0
d2jfla1	288	STE20-like serine/threonine-protein kinase, SLK {H	100.0
d1jpaa_	299	ephb2 receptor tyrosine kinase {Mouse (Mus musculu	100.0
d1uu3a_	288	3-phosphoinositide dependent protein kinase-1 Pdk1	100.0
d1koba_	352	Twitchin, kinase domain {California sea hare (Aply	100.0
d1koaa2	350	Twitchin, kinase domain {Caenorhabditis elegans, p	100.0
d1u59a_	285	Tyrosine-protein kinase ZAP-70 {Human (Homo sapien	100.0
d1o6la_	337	Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9	100.0
d1s9ja_	322	Dual specificity mitogen-activated protein kinase	100.0
d1nvra_	271	Cell cycle checkpoint kinase chk1 {Human (Homo sap	100.0
d1uwha_	276	B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1t4ha_	270	Protein kinase wnk1 {Human (Homo sapiens) [TaxId:	100.0
d1xbba_	277	Tyrosine-protein kinase SYK {Human (Homo sapiens)	100.0
d1u5ra_	309	Serine/threonine protein kinase TAO2 {Rat (Rattus	100.0
d1sm2a_	263	Tyrosine-protein kinase Itk/Tsk {Human (Homo sapie	100.0
d1fota_	316	cAMP-dependent PK, catalytic subunit {Baker's yeas	100.0
d1jksa_	293	Death-associated protein kinase, Dap {Human (Homo	100.0
d1opja_	287	Abelsone tyrosine kinase (abl) {Mouse (Mus musculu	100.0
d1k2pa_	258	Bruton's tyrosine kinase (Btk) {Human (Homo sapien	100.0
d1qpca_	272	Lymphocyte kinase (lck) {Human (Homo sapiens) [Tax	100.0
d1rdqe_	350	cAMP-dependent PK, catalytic subunit {Mouse (Mus m	100.0
d1gz8a_	298	Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [T	100.0
d1mqba_	283	epha2 receptor tyrosine kinase {Human (Homo sapien	100.0
d1mp8a_	273	Focal adhesion kinase 1 (fak) {Human (Homo sapiens	100.0
d1tkia_	321	Titin, kinase domain {Human (Homo sapiens) [TaxId:	100.0
d1blxa_	305	Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [T	100.0
d1o6ya_	277	Mycobacterial protein kinase PknB, catalytic domai	100.0
d1rjba_	325	Fl cytokine receptor {Human (Homo sapiens) [TaxId:	100.0
d1xjda_	320	Protein kinase C, theta type {Human (Homo sapiens)	100.0
d1xkka_	317	EGF receptor tyrosine kinase, Erbb-1 {Human (Homo	100.0
d1ob3a_	286	Cyclin-dependent PK, CDK2 {(Plasmodium falciparum)	100.0
d3blha1	318	Cell division protein kinase 9, CDK9 {Human (Homo	100.0
d1byga_	262	Carboxyl-terminal src kinase (csk) {Human (Homo sa	100.0
d1phka_	277	gamma-subunit of glycogen phosphorylase kinase (Ph	100.0
d1fmka3	285	c-src tyrosine kinase {Human (Homo sapiens) [TaxId	100.0
d1omwa3	364	G-protein coupled receptor kinase 2 {Cow (Bos taur	100.0
d1u46a_	273	Activated CDC42 kinase 1, ACK1 {Human (Homo sapien	100.0
d2ozaa1	335	MAP kinase activated protein kinase 2, mapkap2 {Hu	100.0
d1q5ka_	350	Glycogen synthase kinase-3 beta (Gsk3b) {Human (Ho	100.0
d1cm8a_	346	MAP kinase p38-gamma {Human (Homo sapiens) [TaxId:	100.0
d1lufa_	301	Musk tyrosine kinase {Rat (Rattus norvegicus) [Tax	100.0
d1fvra_	309	Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}	99.98
d1pmea_	345	MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606	99.97
d2b1pa1	355	c-jun N-terminal kinase (jnk3s) {Human (Homo sapie	99.97
d1p4oa_	308	Insulin-like growth factor 1 receptor {Human (Homo	99.97
d1r0pa_	311	Hepatocyte growth factor receptor, c-MET {Human (H	99.97
d1xwsa_	273	Proto-oncogene serine/threonine-protein kinase Pim	99.97
d1unla_	292	Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [T	99.97
d1fgka_	299	Fibroblast growth factor receptor 1 {Human (Homo s	99.97
d2gfsa1	348	MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]	99.97
d3bqca1	328	Protein kinase CK2, alpha subunit {Rattus norvegic	99.97
d1t46a_	311	c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]	99.97
d1ywna1	299	Vascular endothelial growth factor receptor 2 (kdr	99.97
d1vzoa_	322	Ribosomal protein S6 kinase alpha 5, Msk1 {Human (	99.96
d1ckia_	299	Casein kinase-1, CK1 {Rat (Rattus norvegicus) [Tax	99.95
d1vjya_	303	Type I TGF-beta receptor R4 {Human (Homo sapiens)	99.95
d1csna_	293	Casein kinase-1, CK1 {Fission yeast (Schizosacchar	99.95
d1q8ya_	362	Sky1p {Baker's yeast (Saccharomyces cerevisiae) [T	99.89
d1zara2	191	Rio2 serine protein kinase C-terminal domain {Arch	99.28
d1j7la_	263	Type IIIa 3',5"-aminoglycoside phosphotransferase	85.42
d1nd4a_	255	Aminoglycoside 3'-phosphotransferase IIa (Kanamyci	83.84

>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: pak1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-37  Score=238.81  Aligned_cols=162  Identities=20%  Similarity=0.231  Sum_probs=134.1

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+++......+.+.+|++++++++|||||+++++|        .++...|++||||.+|+|
T Consensus        33 fg~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~--------~~~~~~~ivmEy~~gg~L  104 (293)
T d1yhwa1          33 SGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY--------LVGDELWVVMEYLAGGSL  104 (293)
T ss_dssp             SCEEEEEEBTTTCCEEEEEEEEGGGCSCHHHHHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTTCBH
T ss_pred             CcEEEEEEECCCCCEEEEEEEecccChHHHHHHHHHHHHHhCCCCCEeeEeEEE--------EECCEEEEEEEecCCCcH
Confidence            788888 2    333344444443444567799999999999999999999986        446678999999999999


Q ss_pred             HHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccccc
Q psy7174          80 ARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLYCT  127 (188)
Q Consensus        80 ~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~y~  127 (188)
                      ..+       +..++.++ +|++.||.|||+++       |+||       +||+|||++.           ..||+.| 
T Consensus       105 ~~~~~~~~l~~~~~~~i~-~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~vkl~DFG~a~~~~~~~~~~~~~~gt~~Y-  182 (293)
T d1yhwa1         105 TDVVTETCMDEGQIAAVC-RECLQALEFLHSNQVIHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYW-  182 (293)
T ss_dssp             HHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSTTCCBCCCCSCGGG-
T ss_pred             HHHhhccCCCHHHHHHHH-HHHHHHHHHHHHCCCcccCCcHHHeEECCCCcEeeccchhheeeccccccccccccCCCc-
Confidence            886       45677788 89999999999998       7777       5999999854           4588999 


Q ss_pred             CCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         128 RGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       128 ~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                       +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+.+..+...
T Consensus       183 -~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~~~~~  231 (293)
T d1yhwa1         183 -MAPEVVTRKA-YGPKVDIWSLGIMAIEMIEGEPPYLNENPLRALYLIATN  231 (293)
T ss_dssp             -CCHHHHSSSC-BCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHH
T ss_pred             -cChhhhcCCC-CCchhceehHhHHHHHHhhCCCCCCCCCHHHHHHHHHhC
Confidence             9999998865 899999999999999999999999998887777776654

>d1ua2a_ d.144.1.7 (A:) Cell division protein kinase 7, CDK7 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 7, CDK7
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-37  Score=239.40  Aligned_cols=173  Identities=41%  Similarity=0.664  Sum_probs=142.0

Q ss_pred             cccccc-c----CCccccccccccc-----hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD-----VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~-----~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    ++..++|.+++..     ....+.+.+|+++|++++|||||+++++|        .++...+++|||+
T Consensus        11 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~~--------~~~~~~~ivmE~~   82 (299)
T d1ua2a_          11 FATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALREIKLLQELSHPNIIGLLDAF--------GHKSNISLVFDFM   82 (299)
T ss_dssp             TEEEEEEECSSCCSEEEEEEC------------CTHHHHHHHHHHHCCCTTBCCEEEEE--------CCTTCCEEEEECC
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhhhhhhhHHHHHHHHHHHHHHHhCCCCCEeEEEeee--------ccCCceeehhhhh
Confidence            789998 2    3334455444321     12245788999999999999999999986        4567899999999


Q ss_pred             ccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cc
Q psy7174          75 TKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HV  121 (188)
Q Consensus        75 ~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~  121 (188)
                      .++++..+        +..++.++ +|++.||+|||+++       |+||       +||+|||++.           .+
T Consensus        83 ~~~~~~~~~~~~~~l~~~~~~~~~-~qil~aL~~lH~~~iiHrDiKp~NIli~~~~~~KL~DFG~a~~~~~~~~~~~~~~  161 (299)
T d1ua2a_          83 ETDLEVIIKDNSLVLTPSHIKAYM-LMTLQGLEYLHQHWILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYTHQV  161 (299)
T ss_dssp             SEEHHHHHTTCCSSCCSSHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCCGGGSTTTSCCCCCCCSC
T ss_pred             cchHHhhhhhcccCCCHHHHHHHH-HHHHHHHHHhhccceecccCCcceEEecCCCccccccCccccccCCCccccccee
Confidence            99988765        35677788 89999999999998       7777       5999999853           45


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ||+.|  +|||++.....|+.++||||+||++|||++|++||.+.++.+++.+|.+.++.|+.+.||
T Consensus       162 gt~~y--~aPE~~~~~~~~~~~~DiwSlGvil~el~~g~~pf~~~~~~~~l~~i~~~~~~~~~~~~~  226 (299)
T d1ua2a_         162 VTRWY--RAPELLFGARMYGVGVDMWAVGCILAELLLRVPFLPGDSDLDQLTRIFETLGTPTEEQWP  226 (299)
T ss_dssp             CCCTT--CCHHHHTTCSCCCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCTTTSS
T ss_pred             cChhh--ccHHHHccCCCCChhhhhhhcchHHHHHHhCcCCCCCCCHHHHHHHHHHhcCCCChhhcc
Confidence            78999  999999766668999999999999999999999999999999999999999999888775

>d2j4za1 d.144.1.7 (A:126-388) Aurora-related kinase 1 (aurora-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Aurora-related kinase 1 (aurora-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.5e-37  Score=234.31  Aligned_cols=162  Identities=18%  Similarity=0.208  Sum_probs=133.9

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|++++++++||||+++++++        .++...+++||||.+
T Consensus        19 fg~Vy~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~--------~~~~~~~ivmEy~~~   90 (263)
T d2j4za1          19 FGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYGYF--------HDATRVYLILEYAPL   90 (263)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CcEEEEEEECCCCcEEEEEEEchHHccChHHHHHHHHHHHHHHhcCCCCCCeEEEEE--------EECCEEEEEEeecCC
Confidence            788887 2    233345544432   233456788999999999999999999986        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------cccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVCTLY  125 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~~~~  125 (188)
                      |+|..+        +..++.++ +|+++||+|||+++       |+|+       +||+|||++.         ..||+.
T Consensus        91 g~L~~~l~~~~~l~e~~~~~i~-~qi~~al~~lH~~~ivHrDiKp~Nill~~~~~~kl~DFG~a~~~~~~~~~~~~Gt~~  169 (263)
T d2j4za1          91 GTVYRELQKLSKFDEQRTATYI-TELANALSYCHSKRVIHRDIKPENLLLGSAGELKIADFGWSVHAPSSRRTTLCGTLD  169 (263)
T ss_dssp             CBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEECCCCSCSCCCCCCCEETTEEGG
T ss_pred             CcHHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHHCCeeeeeeccccceecCCCCEeecccceeeecCCCcccccCCCCc
Confidence            999875        45677777 89999999999998       6777       5999999854         468999


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |  +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+.+.+|.+.
T Consensus       170 Y--~APE~~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~  219 (263)
T d2j4za1         170 Y--LPPEMIEGRM-HDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKRISRV  219 (263)
T ss_dssp             G--CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHTT
T ss_pred             c--cCHHHHcCCC-CCchhhhhhHhHHHHHHhcCCCCCCCCCHHHHHHHHHcC
Confidence            9  9999998865 999999999999999999999999999888888877654

>d1a06a_ d.144.1.7 (A:) Calmodulin-dependent protein kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Calmodulin-dependent protein kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=4.6e-37  Score=239.54  Aligned_cols=167  Identities=19%  Similarity=0.175  Sum_probs=126.5

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+.+. .....+.+.+|+++|++++||||+++++++        .++...+++||||.+|+
T Consensus        22 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~--------~~~~~~~lvmE~~~gg~   93 (307)
T d1a06a_          22 FSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPNIVALDDIY--------ESGGHLYLIMQLVSGGE   93 (307)
T ss_dssp             GGGEEEEEETTTCCEEEEEEEEC----------CHHHHHHHTCCCTTBCCEEEEE--------ECSSEEEEEECCCCSCB
T ss_pred             CeEEEEEEECCCCCEEEEEEEchHHhhhHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEeccCCCc
Confidence            788998 2    334445555443 233445678999999999999999999986        45678899999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------cccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCT  123 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~  123 (188)
                      |..+        +..+..++ .|++.||+|||+++       |+|+          +||+|||++.          .+||
T Consensus        94 L~~~l~~~~~l~e~~~~~~~-~qi~~al~ylH~~~iiHrDiKp~Nil~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~GT  172 (307)
T d1a06a_          94 LFDRIVEKGFYTERDASRLI-FQVLDAVKYLHDLGIVHRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGT  172 (307)
T ss_dssp             HHHHHHTCSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEESSSSTTCCEEECCC------------------
T ss_pred             HHHhhhcccCCCHHHHHHHH-HHHHHHHHhhhhceeeeEEecccceeecccCCCceEEEeccceeEEccCCCeeeeeeeC
Confidence            9875        45677777 89999999999998       5555          6999999854          4689


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      +.|  +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+....|.+.-..++
T Consensus       173 ~~y--~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~~~~~  229 (307)
T d1a06a_         173 PGY--VAPEVLAQKP-YSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFD  229 (307)
T ss_dssp             CTT--SCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHTTCCCCC
T ss_pred             ccc--cCcHHHcCCC-CCcHHHhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHhccCCCCC
Confidence            999  9999998865 99999999999999999999999999988888888876544433

>d2java1 d.144.1.7 (A:3-271) Serine/threonine-protein kinase Nek2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine-protein kinase Nek2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-37  Score=235.84  Aligned_cols=173  Identities=19%  Similarity=0.212  Sum_probs=133.7

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  .....+.+.+|++++++++||||+++++++.+      ..+...|++||||.+|
T Consensus        17 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~------~~~~~~~ivmEy~~~g   90 (269)
T d2java1          17 YGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIVRYYDRIID------RTNTTLYIVMEYCEGG   90 (269)
T ss_dssp             SEEEEEEEETTTCCEEEEEEECCTTSCHHHHHHHHHHHHHTTSCCCTTBCCEEEEEEC----------CEEEEEECCTTE
T ss_pred             CeEEEEEEECCCCCEEEEEEEChhhCCHHHHHHHHHHHHHHHHCCCCCEeeEEEEEEe------CCCCEEEEEEecCCCC
Confidence            788998 2    233444544432  34455678999999999999999999998632      2345689999999999


Q ss_pred             cHHHHH------------HHHHHHHHHHHHHHHHHHhhcC------------CCCe-------EEEecCCccc-------
Q psy7174          78 TKARFY------------SHLRYLENQQILEGLQALKSSM------------PALL-------KKFVGIGIGR-------  119 (188)
Q Consensus        78 ~l~~~~------------~~~~~~~~~qi~~gl~~lH~~~------------~~~i-------lkl~dfg~~~-------  119 (188)
                      +|..+.            ..+..++ .|++.||.|||+.+            |+||       +||+|||++.       
T Consensus        91 ~L~~~i~~~~~~~~~l~e~~~~~i~-~qi~~al~ylH~~~~~~~~IiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~  169 (269)
T d2java1          91 DLASVITKGTKERQYLDEEFVLRVM-TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTS  169 (269)
T ss_dssp             EHHHHHHHHHHHTCCCCHHHHHHHH-HHHHHHHHHHHHHCC---------CCGGGEEECTTSCEEECCHHHHHHC-----
T ss_pred             cHHHHHHhccccCCCCCHHHHHHHH-HHHHHHHHHHHHhcCCCCCEEeCcCchhhcCcCCCCcEEEeeccceeecccCCC
Confidence            998752            3466677 89999999999853            6666       5999999743       


Q ss_pred             ----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         120 ----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       120 ----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                          ..||+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+...+|...-..+.|..+
T Consensus       170 ~~~~~~gt~~Y--~APE~l~~~~-~~~~~DIwSlGvilyel~tg~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  238 (269)
T d2java1         170 FAKAFVGTPYY--MSPEQMNRMS-YNEKSDIWSLGCLLYELCALMPPFTAFSQKELAGKIREGKFRRIPYRY  238 (269)
T ss_dssp             ------CCCSC--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHTCCCCCCTTS
T ss_pred             ccccCCCCccc--CCHHHHcCCC-CChHHHHHhhCHHHHHHhhCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence                4688999  9999998765 999999999999999999999999999988888888765544444443

>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: STE20-like serine/threonine-protein kinase, SLK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.2e-37  Score=236.45  Aligned_cols=163  Identities=18%  Similarity=0.227  Sum_probs=134.5

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+.+...+..+.+.+|+++|++++|||||+++++|        .++...+++||||.+|+|
T Consensus        25 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~--------~~~~~~~lvmEy~~~g~L   96 (288)
T d2jfla1          25 FGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKLLDAF--------YYENNLWILIEFCAGGAV   96 (288)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECSSSGGGGGTHHHHHHHHHCCCTTBCCEEEEE--------EETTEEEEEEECCTTEEH
T ss_pred             CcEEEEEEECCCCeEEEEEEECcCCHHHHHHHHHHHHHHHhCCCCCCCeEEEEE--------eeCCeEEEEEecCCCCcH
Confidence            788998 2    334445555555566678899999999999999999999986        446788999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      ..+         +..++.++ .|++.||.|||+++       |+|+       +||+|||++.           ..||+.
T Consensus        97 ~~~~~~~~~~l~e~~~~~i~-~qi~~gL~ylH~~~ivHrDiKp~NIll~~~~~~Kl~DFG~a~~~~~~~~~~~~~~Gt~~  175 (288)
T d2jfla1          97 DAVMLELERPLTESQIQVVC-KQTLDALNYLHDNKIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFIGTPY  175 (288)
T ss_dssp             HHHHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECHHHHHHHTCCCSCCT
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCEEEeecChhheeECCCCCEEEEechhhhccCCCcccccccccccc
Confidence            875         34577777 89999999999998       6677       5999999853           568999


Q ss_pred             ccCCCCccccc----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         126 CTRGAPELLFG----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       126 y~~~aPe~~~~----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |  +|||++..    ...|+.++||||+||++|||++|++||.+.+..+.+.++.+.
T Consensus       176 y--~APE~l~~~~~~~~~y~~k~DiwSlGvilyemltg~~Pf~~~~~~~~~~~i~~~  230 (288)
T d2jfla1         176 W--MAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKS  230 (288)
T ss_dssp             T--CCHHHHTTCSTTTSSTTTHHHHHHHHHHHHHHHHSSCTTTTSCGGGHHHHHHHS
T ss_pred             c--CCHHHHhhcccCCCCCChhhhHHHHHHHHHHHhhCCCCCCCCCHHHHHHHHHcC
Confidence            9  99999842    234899999999999999999999999998888887777654

>d1jpaa_ d.144.1.7 (A:) ephb2 receptor tyrosine kinase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: ephb2 receptor tyrosine kinase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.3e-36  Score=236.13  Aligned_cols=172  Identities=15%  Similarity=0.177  Sum_probs=135.3

Q ss_pred             cccccc-c----CCcccccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .    ++....+++|..    ..+..+.+.+|+++|++++|||||+++|+|        .++...+++||||.
T Consensus        39 fg~Vy~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~--------~~~~~~~iv~Ey~~  110 (299)
T d1jpaa_          39 FGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLEGVV--------TKSTPVMIITEFME  110 (299)
T ss_dssp             SSEEEEEEECC---CCEEEEEEECCSSCCHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------CSSSSCEEEEECCT
T ss_pred             CeEEEEEEEeCCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCCccEEEEE--------eeCCEEEEEEEecC
Confidence            788987 2    222224455542    445567899999999999999999999986        44677899999999


Q ss_pred             cccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------
Q psy7174          76 KTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        76 ~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      +|+|..+         ...+..++ .|+++||.|||+++       |+||       +||+|||+++             
T Consensus       111 ~g~L~~~~~~~~~~l~~~~~~~i~-~qia~gl~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~~  189 (299)
T d1jpaa_         111 NGSLDSFLRQNDGQFTVIQLVGML-RGIAAGMKYLADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTS  189 (299)
T ss_dssp             TEEHHHHHHTTTTCSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCC-----------------
T ss_pred             CCcceeeeccccCCCCHHHHHHHH-HHHHHHHHHHhhCCCccCccccceEEECCCCcEEECCcccceEccCCCCcceeee
Confidence            9999875         34456666 89999999999998       6666       5999999864             


Q ss_pred             ---ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 ---HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ---~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                         ..+|..|  +|||.+.+.. |+.++|||||||++|||++ |++||.+.+..+.+..+.+..+.|.|..+|
T Consensus       190 ~~~~~~t~~y--~aPE~~~~~~-~~~~sDvwS~Gvvl~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  259 (299)
T d1jpaa_         190 ALGGKIPIRW--TAPEAIQYRK-FTSASDVWSYGIVMWEVMSYGERPYWDMTNQDVINAIEQDYRLPPPMDCP  259 (299)
T ss_dssp             ------CGGG--SCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             cccccCCccc--cCHHHHhcCC-CCcccccccchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCccch
Confidence               2346779  9999998765 9999999999999999997 899999999988888888888777777665

>d1uu3a_ d.144.1.7 (A:) 3-phosphoinositide dependent protein kinase-1 Pdk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: 3-phosphoinositide dependent protein kinase-1 Pdk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-36  Score=235.24  Aligned_cols=162  Identities=18%  Similarity=0.224  Sum_probs=134.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+++|++++||||++++++|        .++...|++|||+.+
T Consensus        21 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~~~~--------~~~~~~~ivmEy~~g   92 (288)
T d1uu3a_          21 FSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYFTF--------QDDEKLYFGLSYAKN   92 (288)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHCCSTTBCCEEEEE--------ECSSEEEEEECCCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHccCHHHHHHHHHHHHHHHHcCCCCeeEEEEEE--------EECCEEEEEEEccCC
Confidence            788997 2    334445555442   233456789999999999999999999986        456788999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HV  121 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~  121 (188)
                      |+|..+        +..++.++ .|++.||.|||+++       |+||       +||+|||++.             ..
T Consensus        93 g~L~~~~~~~~~l~e~~~~~~~-~qi~~al~ylH~~~iiHrDiKp~NIll~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~  171 (288)
T d1uu3a_          93 GELLKYIRKIGSFDETCTRFYT-AEIVSALEYLHGKGIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFV  171 (288)
T ss_dssp             EEHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECC----------CC
T ss_pred             CCHHHhhhccCCCCHHHHHHHH-HHHHHHHHhhccccEEcCcCCccccccCCCceEEecccccceecccCCccccccccc
Confidence            999875        45577777 89999999999998       6676       5999999854             35


Q ss_pred             ccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         122 CTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       122 ~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      ||+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+.+|.+.
T Consensus       172 GT~~Y--~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~  225 (288)
T d1uu3a_         172 GTAQY--VSPELLTEKS-ACKSSDLWALGCIIYQLVAGLPPFRAGNEYLIFQKIIKL  225 (288)
T ss_dssp             CCGGG--CCHHHHHTCC-CCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTT
T ss_pred             CCccc--cCceeeccCC-CCcccceehhhHHHHHHhhCCCCCCCcCHHHHHHHHHcC
Confidence            89999  9999998865 999999999999999999999999999988888888765

>d1koba_ d.144.1.7 (A:) Twitchin, kinase domain {California sea hare (Aplysia californica), twk43 [TaxId: 6500]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: California sea hare (Aplysia californica), twk43 [TaxId: 6500]

Probab=100.00  E-value=2e-36  Score=239.94  Aligned_cols=171  Identities=18%  Similarity=0.160  Sum_probs=140.8

Q ss_pred             cccccc-----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+     +++..++|.+.+......+.+.+|+++|++++|||||+++++|        .++...+++||||.+|+|
T Consensus        42 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~--------~~~~~~~ivmE~~~gg~L  113 (352)
T d1koba_          42 FGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQLHHPKLINLHDAF--------EDKYEMVLILEFLSGGEL  113 (352)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECCSHHHHHHHHHHHHHHTTCCSTTBCCEEEEE--------ECSSEEEEEEECCCCCBH
T ss_pred             CeEEEEEEECCCCCEEEEEEECCcchhHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEEcCCCChH
Confidence            788997     2334445555444445567788999999999999999999986        456788999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ...         +..+..++ .||+.||.|||+++       |+||         +||+|||++.          ..||+
T Consensus       114 ~~~~~~~~~~l~e~~~~~i~-~qi~~aL~ylH~~~iiHRDiKp~NILl~~~~~~~vkL~DFGla~~~~~~~~~~~~~gt~  192 (352)
T d1koba_         114 FDRIAAEDYKMSEAEVINYM-RQACEGLKHMHEHSIVHLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATA  192 (352)
T ss_dssp             HHHTTCTTCCBCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSTTCCCEEECCCTTCEECCTTSCEEEECSSG
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHCCeeecccccccccccccCCCeEEEeecccceecCCCCceeeccCcc
Confidence            764         56677788 89999999999998       6666         5999999864          46788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      .|  +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+.+.+|.+.-..+++..|
T Consensus       193 ~y--~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~i~~~~~~~~~~~~  252 (352)
T d1koba_         193 EF--AAPEIVDREP-VGFYTDMWAIGVLGYVLLSGLSPFAGEDDLETLQNVKRCDWEFDEDAF  252 (352)
T ss_dssp             GG--CCHHHHTTCC-BCHHHHHHHHHHHHHHHHHSCCSSCCSSHHHHHHHHHHCCCCCCSSTT
T ss_pred             cc--cCHHHHcCCC-CCCccchHHHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence            99  9999998865 999999999999999999999999999999999888776555554433

>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain {Caenorhabditis elegans, pjk4 [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Twitchin, kinase domain
species: Caenorhabditis elegans, pjk4 [TaxId: 6239]

Probab=100.00  E-value=1.1e-36  Score=241.20  Aligned_cols=168  Identities=15%  Similarity=0.117  Sum_probs=138.6

Q ss_pred             cccccc-cC----CccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QS----KWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~----~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .+    +..++|.+.+......+.+.+|+++|++++|||||+++++|        .++...+++||||.+|+|
T Consensus        39 fg~Vy~~~~~~~g~~vAvK~i~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~--------~~~~~~~ivmE~~~gg~L  110 (350)
T d1koaa2          39 FGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF--------EDDNEMVMIYEFMSGGEL  110 (350)
T ss_dssp             TEEEEEEEETTTTEEEEEEEECCCSHHHHHHHHHHHHHHHHTCCTTBCCEEEEE--------EETTEEEEEECCCCSCBH
T ss_pred             CeEEEEEEECCCCCEEEEEEEcccchhhHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEEcCCCCCH
Confidence            788998 32    33345544444455567889999999999999999999986        456789999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ..+         +..+..++ +||+.||.|||+++       |+||         +||+|||++.          ..||+
T Consensus       111 ~~~l~~~~~~l~e~~~~~i~-~qi~~aL~ylH~~~iiHrDiKp~NIll~~~~~~~vkL~DFG~a~~~~~~~~~~~~~gT~  189 (350)
T d1koaa2         111 FEKVADEHNKMSEDEAVEYM-RQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTTGTA  189 (350)
T ss_dssp             HHHHTCTTSCBCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSTTSCCEEECCCTTCEECCTTSCEEEECSCT
T ss_pred             HHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHhcCCeeeeechhHeeeccCCCCeEEEeecchheecccccccceecCcc
Confidence            775         45677788 89999999999998       6665         5999999864          46799


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      .|  +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+.+.+|...-..+++
T Consensus       190 ~Y--~aPEv~~~~~-~~~~~DiwSlGvilyell~G~~Pf~~~~~~~~~~~i~~~~~~~~~  246 (350)
T d1koaa2         190 EF--AAPEVAEGKP-VGYYTDMWSVGVLSYILLSGLSPFGGENDDETLRNVKSCDWNMDD  246 (350)
T ss_dssp             TT--CCHHHHHTCC-BCHHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCCCSCC
T ss_pred             cc--cCHHHHcCCC-CChhHhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCCCc
Confidence            99  9999998865 899999999999999999999999999998888888766544433

>d1u59a_ d.144.1.7 (A:) Tyrosine-protein kinase ZAP-70 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase ZAP-70
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.8e-36  Score=233.89  Aligned_cols=171  Identities=15%  Similarity=0.138  Sum_probs=138.1

Q ss_pred             cccccc-cCC------cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-QSK------WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~~~------~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ ..+      .+++|.+++. .....+++.+|+++|++++|||||++++++         .....++||||+++
T Consensus        22 fg~Vy~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~E~~il~~l~HpnIv~l~g~~---------~~~~~~lvmE~~~~   92 (285)
T d1u59a_          22 FGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVRLIGVC---------QAEALMLVMEMAGG   92 (285)
T ss_dssp             TEEEEEEEEC---CCEEEEEEEECSSCCHHHHHHHHHHHHHHHHCCCTTBCCEEEEE---------ESSSEEEEEECCTT
T ss_pred             CeEEEEEEEecCCCcEEEEEEEEChhcCHHHHHHHHHHHHHHHhCCCCCEeeEeeee---------ccCeEEEEEEeCCC
Confidence            788887 211      2345555544 445567899999999999999999999985         12457999999999


Q ss_pred             ccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------
Q psy7174          77 TTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------  119 (188)
Q Consensus        77 ~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------  119 (188)
                      |+|..+         +..+..++ .|++.||.|||+++       |+|+       +||+|||+++              
T Consensus        93 g~L~~~l~~~~~~l~~~~~~~i~-~qi~~gL~ylH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~  171 (285)
T d1u59a_          93 GPLHKFLVGKREEIPVSNVAELL-HQVSMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSA  171 (285)
T ss_dssp             EEHHHHHTTCTTTSCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEEETTEEEECCCTTCEECTTCSCEECCCCS
T ss_pred             CcHHHHhhccccCCCHHHHHHHH-HHHHHHHHHHHhCCeecCcCchhheeeccCCceeeccchhhhcccccccccccccc
Confidence            999886         34566677 89999999999998       6666       5999999864              


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..||..|  +|||++.... ++.++|||||||++|||++ |++||.+.+..+....|.+..+.+.|..+|
T Consensus       172 ~~gt~~y--~aPE~~~~~~-~~~ksDVwS~Gv~l~E~lt~G~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~  238 (285)
T d1u59a_         172 GKWPLKW--YAPECINFRK-FSSRSDVWSYGVTMWEALSYGQKPYKKMKGPEVMAFIEQGKRMECPPECP  238 (285)
T ss_dssp             SCCCGGG--CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCTHHHHHHHHTTCCCCCCTTCC
T ss_pred             cccCccc--cChHHHhCCC-CCccchhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHcCCCCCCCCcCC
Confidence            2356778  9999998765 9999999999999999997 999999998888888888777777776665

>d1o6la_ d.144.1.7 (A:) Pkb kinase (Akt-2) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Pkb kinase (Akt-2)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.9e-36  Score=236.88  Aligned_cols=162  Identities=14%  Similarity=0.131  Sum_probs=136.0

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+     +++..++|.+++.   ..+..+++.+|+++|++++||||++++++|        .++...++||||+.+
T Consensus        18 fg~V~~~~~~~~~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~hp~Iv~l~~~~--------~~~~~~~iv~ey~~g   89 (337)
T d1o6la_          18 FGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFLTALKYAF--------QTHDRLCFVMEYANG   89 (337)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhCCCCCEEEEEeee--------ccccccccceeccCC
Confidence            789997     3344445555542   234557789999999999999999999986        567789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      |+|..+        +..++.++ +|++.||+|||+++       |+||       +||+|||+++           .+||
T Consensus        90 g~L~~~~~~~~~~~e~~~~~~~-~qil~al~ylH~~~iiHRDlKP~NILl~~~g~vkl~DFG~a~~~~~~~~~~~~~~GT  168 (337)
T d1o6la_          90 GELFFHLSRERVFTEERARFYG-AEIVSALEYLHSRDVVYRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGT  168 (337)
T ss_dssp             CBHHHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCSCCTTCCBCCCEEC
T ss_pred             CchhhhhhcccCCcHHHHHHHH-HHHhhhhhhhhhcCccccccCHHHeEecCCCCEEEeecccccccccCCcccccceeC
Confidence            999875        45677888 89999999999998       6676       5999999854           5689


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      +.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+....+...
T Consensus       169 ~~Y--~aPE~~~~~~-y~~~~DiwSlGvilyeml~G~~pf~~~~~~~~~~~i~~~  220 (337)
T d1o6la_         169 PEY--LAPEVLEDND-YGRAVDWWGLGVVMYEMMCGRLPFYNQDHERLFELILME  220 (337)
T ss_dssp             GGG--CCGGGGSSSC-BCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             HHH--hhhhhccCCC-CChhhcccchhhHHHHHHHCCCCCCCcCHHHHHHHHhcC
Confidence            999  9999998866 999999999999999999999999999988887777654

>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Dual specificity mitogen-activated protein kinase kinase 1, Mek1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.5e-36  Score=236.84  Aligned_cols=151  Identities=17%  Similarity=0.203  Sum_probs=124.8

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+++. .....+++.+|+++|++++|||||+++++|        .++...++||||+.+|+
T Consensus        19 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~il~~l~HpnIv~l~~~~--------~~~~~~~iVmEy~~gg~   90 (322)
T d1s9ja_          19 GGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF--------YSDGEISICMEHMDGGS   90 (322)
T ss_dssp             SCCEEEEEETTTTEEEEEEEEECCCCTTHHHHHHHHGGGGGGCCCTTBCCEEEEE--------ECSSEEEEEEECCTTEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEChhhCHHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEEcCCCCc
Confidence            788998 2    333445555442 344557889999999999999999999987        44667899999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhh-cC-------CCCe-------EEEecCCccc---------ccccccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKS-SM-------PALL-------KKFVGIGIGR---------HVCTLYC  126 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~-~~-------~~~i-------lkl~dfg~~~---------~~~~~~y  126 (188)
                      |..+        +..++.++ .|++.||.|||+ ++       |+||       +||+|||++.         .+||..|
T Consensus        91 L~~~l~~~~~l~~~~~~~~~-~qil~aL~yLH~~~~IiHRDiKP~NILl~~~~~vkl~DFGla~~~~~~~~~~~~GT~~Y  169 (322)
T d1s9ja_          91 LDQVLKKAGRIPEQILGKVS-IAVIKGLTYLREKHKIMHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSY  169 (322)
T ss_dssp             HHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHHHCCCCSCCSGGGEEECTTCCEEECCCCCCHHHHHHTC---CCSSCC
T ss_pred             HHHHHhhcCCCCHHHHHHHH-HHHHHHHHHHHHhCCEEccccCHHHeeECCCCCEEEeeCCCccccCCCccccccCCccc
Confidence            9886        34577777 899999999997 46       7777       5999999854         5799999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                        +|||++.+.. |+.++||||+||++|||++|+.||.+.+
T Consensus       170 --~APEvl~~~~-y~~~~DiWSlGvil~ell~G~~Pf~~~~  207 (322)
T d1s9ja_         170 --MSPERLQGTH-YSVQSDIWSMGLSLVEMAVGRYPIPPPD  207 (322)
T ss_dssp             --CCHHHHHCSC-CCTTHHHHHHHHHHHHHHHSSCCSSCCC
T ss_pred             --cCchHHcCCC-CCcHHHHHHHHHHHHHHHHCCCCCCCCC
Confidence              9999998866 9999999999999999999999997654

>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell cycle checkpoint kinase chk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-36  Score=232.70  Aligned_cols=153  Identities=17%  Similarity=0.171  Sum_probs=121.7

Q ss_pred             cccccc-c----CCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .    ++..++|.+.+. ..+..+.+.+|+++|++++||||+++++++        .++...+++||||.+|+
T Consensus        18 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~Ei~~l~~l~HpnIv~~~~~~--------~~~~~~~ivmEy~~gg~   89 (271)
T d1nvra_          18 YGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR--------REGNIQYLFLEYCSGGE   89 (271)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEECC-------CHHHHHHHHHTCCCTTBCCEEEEE--------EETTEEEEEEECCTTEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHhCCCCCEeeEeeee--------ccCceeEEEEeccCCCc
Confidence            788987 3    233445544433 334456789999999999999999999986        44678899999999999


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------cccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCT  123 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~  123 (188)
                      |..+        +..++.++ +|+++||+|||+++       |+||       +||+|||++.             .+||
T Consensus        90 L~~~l~~~~~l~e~~~~~i~-~qi~~al~ylH~~~IiHrDiKp~NILl~~~~~~KL~DFG~a~~~~~~~~~~~~~~~~GT  168 (271)
T d1nvra_          90 LFDRIEPDIGMPEPDAQRFF-HQLMAGVVYLHGIGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT  168 (271)
T ss_dssp             GGGGSBTTTBCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECTTCCEEECCCTTCEECEETTEECCBCCCCSC
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHcCCccCcccHHHEEECCCCCEEEccchhheeeccCCccccccceeeC
Confidence            9875        56677788 89999999999998       6777       5999999854             4589


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      +.|  +|||++.+...++.++||||+||++|||++|++||.+.+.
T Consensus       169 ~~Y--~APE~~~~~~~~~~~~DiwSlGvilyeml~G~~pf~~~~~  211 (271)
T d1nvra_         169 LPY--VAPELLKRREFHAEPVDVWSCGIVLTAMLAGELPWDQPSD  211 (271)
T ss_dssp             GGG--SCTHHHHCSSBCHHHHHHHHHHHHHHHHHHSSCSCSSSST
T ss_pred             cCc--cCHhHhcCCCCCCCceeeeHhHHHHHHHHhCCCCCCCCCh
Confidence            999  9999998766456889999999999999999999976543

>d1uwha_ d.144.1.7 (A:) B-Raf kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: B-Raf kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-35  Score=228.26  Aligned_cols=161  Identities=15%  Similarity=0.135  Sum_probs=129.1

Q ss_pred             cccccc--cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ--QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~--~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+  .+..+++|.++..  ..+..+.+.+|+++|++++|||||++++++         .+...+++||||.+|+|.
T Consensus        21 fg~Vy~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~~~~---------~~~~~~lv~Ey~~~g~L~   91 (276)
T d1uwha_          21 FGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS---------TAPQLAIVTQWCEGSSLY   91 (276)
T ss_dssp             SCEEEEEESSSEEEEEECCCSSCCTTHHHHHHHHHHHHTTCCCTTBCCEEEEE---------CSSSCEEEEECCCEEEHH
T ss_pred             CcEEEEEEECCEEEEEEEEcccCCHHHHHHHHHHHHHHHhCCCCCEeeeeEEE---------eccEEEEEEecCCCCCHH
Confidence            788998  3334556665543  455667899999999999999999999974         234689999999999998


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccc
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTL  124 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~  124 (188)
                      .+         ...+..++ .|++.||+|||+++       |+|+       +||+|||++.             ..||+
T Consensus        92 ~~l~~~~~~~~~~~~~~i~-~qi~~gl~yLH~~~ivHrDlKp~NiLl~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~  170 (276)
T d1uwha_          92 HHLHIIETKFEMIKLIDIA-RQTAQGMDYLHAKSIIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSI  170 (276)
T ss_dssp             HHHHTSCCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEETTSSEEECCCCCSCC------------CCCCG
T ss_pred             HHHhhccCCCCHHHHHHHH-HHHHHHHHHHhcCCEeccccCHHHEEEcCCCCEEEccccceeeccccCCcccccccccCc
Confidence            85         24566667 89999999999998       6777       5999999853             35788


Q ss_pred             cccCCCCcccccc--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHh
Q psy7174         125 YCTRGAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQ  177 (188)
Q Consensus       125 ~y~~~aPe~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~  177 (188)
                      .|  +|||++...  ..|+.++|||||||++|||++|+.||.+.++...+..+..
T Consensus       171 ~y--~APE~l~~~~~~~~~~~sDiwS~Gv~l~el~tg~~Pf~~~~~~~~~~~~~~  223 (276)
T d1uwha_         171 LW--MAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIFMVG  223 (276)
T ss_dssp             GG--CCHHHHTTCSSCCCCHHHHHHHHHHHHHHHHHSSCTTTTCCCHHHHHHHHH
T ss_pred             cc--CCHHHHhcccCCCCCchhhhhhhHHHHHHHHHCCCCCCCCChHHHHHHHHh
Confidence            99  999998642  2389999999999999999999999998777666555443

>d1t4ha_ d.144.1.7 (A:) Protein kinase wnk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase wnk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.4e-36  Score=228.20  Aligned_cols=159  Identities=19%  Similarity=0.193  Sum_probs=124.9

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+...  .....+.+.+|+++|++++|||||+++++|...    ...+...+++|||+++|
T Consensus        22 fg~Vy~~~~~~~~~~va~K~i~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~~~~----~~~~~~~~ivmE~~~~g   97 (270)
T d1t4ha_          22 FKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEMLKGLQHPNIVRFYDSWEST----VKGKKCIVLVTELMTSG   97 (270)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEGGGSCHHHHHHHHHHHHHHTTCCCTTBCCEEEEEEEE----SSSCEEEEEEEECCCSC
T ss_pred             CcEEEEEEECCCCeEEEEEEEchhhCCHHHHHHHHHHHHHHHhCCCCCeeeEEEEEeec----cccCCEEEEEEeCCCCC
Confidence            788998 2    223344444332  344567789999999999999999999986331    13345679999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC---------CCCe--------EEEecCCccc---------cccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM---------PALL--------KKFVGIGIGR---------HVCT  123 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~---------~~~i--------lkl~dfg~~~---------~~~~  123 (188)
                      +|..+        +..++.++ +|++.||+|||+++         |+||        +||+|||+++         ..||
T Consensus        98 ~L~~~l~~~~~~~~~~~~~~~-~qi~~gl~yLH~~~~~IiHrDiKp~NILl~~~~~~~Kl~DFGla~~~~~~~~~~~~GT  176 (270)
T d1t4ha_          98 TLKTYLKRFKVMKIKVLRSWC-RQILKGLQFLHTRTPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGT  176 (270)
T ss_dssp             BHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHTSSSCCCCSCCCGGGEEESSTTSCEEECCTTGGGGCCTTSBEESCSS
T ss_pred             cHHHHHhccccccHHHHHHHH-HHHHHHHHHHHHCCCCEEeCCcChhhceeeCCCCCEEEeecCcceeccCCccCCcccC
Confidence            99886        34566677 89999999999976         5555        6999999864         4689


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHH
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQL  172 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~  172 (188)
                      +.|  +|||++.+ + |+.++||||+||++|||++|+.||.+..+...+
T Consensus       177 ~~Y--~aPE~~~~-~-~~~~~DIwSlGvilyel~~g~~Pf~~~~~~~~~  221 (270)
T d1t4ha_         177 PEF--MAPEMYEE-K-YDESVDVYAFGMCMLEMATSEYPYSECQNAAQI  221 (270)
T ss_dssp             CCC--CCGGGGGT-C-CCTHHHHHHHHHHHHHHHHSSCTTTTCSSHHHH
T ss_pred             ccc--cCHHHhCC-C-CCCcCchhhHHHHHHHHHHCCCCCCCcccHHHH
Confidence            999  99999865 4 999999999999999999999999876554443

>d1xbba_ d.144.1.7 (A:) Tyrosine-protein kinase SYK {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase SYK
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-36  Score=231.54  Aligned_cols=171  Identities=15%  Similarity=0.151  Sum_probs=135.3

Q ss_pred             cccccc-c--CC----cccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q--SK----WSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~--~~----~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .  ++    .+++|.++..  .....+++.+|+++|++++|||||+++++|         .+...++||||+.
T Consensus        20 fG~Vy~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~g~~---------~~~~~~lvmE~~~   90 (277)
T d1xbba_          20 FGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYIVRMIGIC---------EAESWMLVMEMAE   90 (277)
T ss_dssp             SEEEEEEEEECSSSEEEEEEEEEC-----CHHHHHHHHHHHHHHTCCCTTBCCEEEEE---------ESSSEEEEEECCT
T ss_pred             CeEEEEEEEccCCcCeEEEEEEEChhhCCHHHHHHHHHHHHHHHhCCCCCCceEEEEe---------ccCCEEEEEEcCC
Confidence            788887 1  22    2334444332  333456799999999999999999999985         1235789999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------  119 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------  119 (188)
                      +|+|..+        +..+..++ .||+.||+|||+++       |+|+       +|++|||+++              
T Consensus        91 ~g~L~~~l~~~~~l~~~~~~~i~-~qi~~gl~ylH~~~iiHrDlKp~Nill~~~~~~kl~DFGla~~~~~~~~~~~~~~~  169 (277)
T d1xbba_          91 LGPLNKYLQQNRHVKDKNIIELV-HQVSMGMKYLEESNFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTH  169 (277)
T ss_dssp             TEEHHHHHHHCTTCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEEETTEEEECCCTTCEECCTTCSEEEC---
T ss_pred             CCcHHHHHhhccCCCHHHHHHHH-HHHHHHHhhHHhCCcccCCCcchhhcccccCcccccchhhhhhccccccccccccc
Confidence            9999886        34466677 79999999999998       7777       4999999864              


Q ss_pred             ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 ~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..||+.|  +|||++.+.. ++.++|||||||++|||++ |++||.+.+..+....|.+..+.+.|..+|
T Consensus       170 ~~gt~~y--~APE~l~~~~-~~~~sDiwS~Gv~l~ellt~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~  236 (277)
T d1xbba_         170 GKWPVKW--YAPECINYYK-FSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSEVTAMLEKGERMGCPAGCP  236 (277)
T ss_dssp             -CCCGGG--CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             cCCCcee--cCchhhcCCC-CCchhhhccchhhhhHHhhCCCCCCCCCCHHHHHHHHHcCCCCCCCcccC
Confidence            2467789  9999998765 9999999999999999997 899999998888888887777777777665

>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Serine/threonine protein kinase TAO2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=5.4e-36  Score=233.59  Aligned_cols=165  Identities=21%  Similarity=0.228  Sum_probs=133.8

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+++|++++|||||+++++|        .++...+++||||.+
T Consensus        28 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~--------~~~~~~~iv~E~~~~   99 (309)
T d1u5ra_          28 FGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRGCY--------LREHTAWLVMEYCLG   99 (309)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEECCSSCHHHHHHHHHHHHHHHTTCCCTTBCCEEEEE--------EETTEEEEEEECCSE
T ss_pred             CeEEEEEEECCCCcEEEEEEEchhhccCHHHHHHHHHHHHHHHHCCCCCEeeEEEEE--------EECCEEEEEEEecCC
Confidence            789998 2    233445544432   233456789999999999999999999986        446678999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------cccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------HVCTLYCT  127 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------~~~~~~y~  127 (188)
                      |++..+        +..++.++ +|++.||.|||+++       |+||       +||+|||++.       ..||+.| 
T Consensus       100 g~l~~~~~~~~~l~e~~~~~i~-~qi~~aL~yLH~~~iiHrDiKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~GT~~Y-  177 (309)
T d1u5ra_         100 SASDLLEVHKKPLQEVEIAAVT-HGALQGLAYLHSHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANSFVGTPYW-  177 (309)
T ss_dssp             EHHHHHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCSGGGEEEETTTEEEECCCTTCBSSSSBCCCCSCGGG-
T ss_pred             CchHHHHHhCCCCCHHHHHHHH-HHHHHHHHHHHhCCEeccCCCcceEEECCCCCEEEeecccccccCCCCccccCccc-
Confidence            998764        35577777 89999999999998       6676       5999999865       5689999 


Q ss_pred             CCCCcccccc--CCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy7174         128 RGAPELLFGA--RMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       128 ~~aPe~~~~~--~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                       +|||++.+.  ..|+.++||||+||++|||++|++||.+.+..+.+.++.+...
T Consensus       178 -~APE~~~~~~~~~y~~~~DiwSlGvilyel~~g~~Pf~~~~~~~~~~~i~~~~~  231 (309)
T d1u5ra_         178 -MAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNES  231 (309)
T ss_dssp             -CCHHHHTTTTSCCBCTHHHHHHHHHHHHHHHHSSCTTTTSCHHHHHHHHHHSCC
T ss_pred             -cCHHHHhccCCCCcCchhhhhhHHHHHHHHHHCCCCCCCCCHHHHHHHHHhCCC
Confidence             999998642  2489999999999999999999999999988888888876543

>d1sm2a_ d.144.1.7 (A:) Tyrosine-protein kinase Itk/Tsk {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tyrosine-protein kinase Itk/Tsk
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-35  Score=225.36  Aligned_cols=171  Identities=13%  Similarity=0.139  Sum_probs=133.4

Q ss_pred             cccccc----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+    +++.+++|.+++. ....+++.+|++++++++||||++++|+|        .++...+++|||+.+|+|.
T Consensus        18 fg~Vy~~~~~~~~~vAvK~i~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~--------~~~~~~~lv~E~~~~g~L~   88 (263)
T d1sm2a_          18 FGLVHLGYWLNKDKVAIKTIREG-AMSEEDFIEEAEVMMKLSHPKLVQLYGVC--------LEQAPICLVFEFMEHGCLS   88 (263)
T ss_dssp             SCCEEEEEETTTEEEEEEECCSS-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHH
T ss_pred             CeEEEEEEECCCCEEEEEEECCC-cCcHHHHHHHHHHHHhcCCCCccccccee--------ccCCceEEEEEecCCCcHH
Confidence            788998    2223345544432 33456799999999999999999999986        4456789999999999998


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccccc
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLY  125 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~  125 (188)
                      .+         ...+..++ .|++.||.|||+++       |+|+       +||+|||+++            ..||..
T Consensus        89 ~~l~~~~~~~~~~~~~~i~-~qia~gl~~lH~~~iiHrDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~~  167 (263)
T d1sm2a_          89 DYLRTQRGLFAAETLLGMC-LDVCEGMAYLEEACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK  167 (263)
T ss_dssp             HHHHTTTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCTTCSGGGEEECGGGCEEECSCC------------------CTT
T ss_pred             HHhhccccCCCHHHHHHHH-HHHHHHHHhhhccceeecccchhheeecCCCCeEecccchheeccCCCceeecceecCcc
Confidence            85         24455566 89999999999998       6666       5999999854            346778


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||++.+.. |+.++|||||||++|||++ |.+||.+.+..+.+..+......+.|..+|
T Consensus       168 y--~aPE~l~~~~-~~~k~DVwS~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~  228 (263)
T d1sm2a_         168 W--ASPEVFSFSR-YSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVEDISTGFRLYKPRLAS  228 (263)
T ss_dssp             S--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHTTSCCTTCSCCHHHHHHHHHHTCCCCCCTTSC
T ss_pred             c--CChHHhcCCC-CCchhhhcchHHHHHHHHHCCCCCCCCCCHHHHHHHHHhcCCCCCccccC
Confidence            9  9999998766 9999999999999999998 688888888888888887777666665543

>d1fota_ d.144.1.7 (A:) cAMP-dependent PK, catalytic subunit {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=8.4e-36  Score=233.21  Aligned_cols=163  Identities=13%  Similarity=0.177  Sum_probs=135.5

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   ..+..+.+.+|+++|++++||||+++++++        .++...+++|||+.+
T Consensus        17 fg~Vy~a~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~--------~~~~~~~ivmE~~~g   88 (316)
T d1fota_          17 FGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWGTF--------QDAQQIFMIMDYIEG   88 (316)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHHSCCBTTBCCEEEEE--------ECSSEEEEEECCCCS
T ss_pred             CcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHhccCcChhheeeeE--------eeCCeeeeEeeecCC
Confidence            788998 3    333445555442   234457789999999999999999999986        456789999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      |++..+        +..++.++ .|++.||.|||+++       |+||       +||+|||++.        ..||+.|
T Consensus        89 g~l~~~~~~~~~~~~~~~~~~~-~qi~~al~~lH~~~iiHrDiKp~NILl~~~g~vkL~DFG~a~~~~~~~~~~~Gt~~Y  167 (316)
T d1fota_          89 GELFSLLRKSQRFPNPVAKFYA-AEVCLALEYLHSKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPDVTYTLCGTPDY  167 (316)
T ss_dssp             CBHHHHHHHTSSCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCCGGGEEECTTSCEEECCCSSCEECSSCBCCCCSCTTT
T ss_pred             ccccccccccccccccHHHHHH-HHHHHhhhhhccCcEEccccCchheeEcCCCCEEEecCccceEeccccccccCcccc
Confidence            998875        34566677 89999999999998       7777       5999999854        5689999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                        +|||++.+.. |+.++||||+||++|+|++|++||.+.+..+...+|...-
T Consensus       168 --~APE~l~~~~-y~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~  217 (316)
T d1fota_         168 --IAPEVVSTKP-YNKSIDWWSFGILIYEMLAGYTPFYDSNTMKTYEKILNAE  217 (316)
T ss_dssp             --CCHHHHTTCC-BCTTHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHCC
T ss_pred             --cCHHHHcCCC-CCchhhccccchhHHHHHhCCCCCCCcCHHHHHHHHHcCC
Confidence              9999998765 9999999999999999999999999999888888887654

>d1jksa_ d.144.1.7 (A:) Death-associated protein kinase, Dap {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Death-associated protein kinase, Dap
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.5e-36  Score=231.55  Aligned_cols=163  Identities=17%  Similarity=0.189  Sum_probs=134.0

Q ss_pred             cccccc-----cCCccccccccccc------hhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD------VNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~------~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+     +++..++|.+++..      ....+.+.+|+++|++++|||||+++++|        .++...+++|||
T Consensus        23 fg~Vy~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~HpnIv~~~~~~--------~~~~~~~iv~E~   94 (293)
T d1jksa_          23 FAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVITLHEVY--------ENKTDVILILEL   94 (293)
T ss_dssp             SEEEEEEEETTTCCEEEEEEEEBCSSTTCSSSBCHHHHHHHHHHHHHCCCTTBCCEEEEE--------ECSSEEEEEEEC
T ss_pred             CeEEEEEEECCCCCEEEEEEEEhhhcchhhhhHHHHHHHHHHHHHHhCCCCCCCcEEEEE--------EECCEEEEEEEc
Confidence            788888     23444566655421      12356789999999999999999999986        456788999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-----------EEEecCCccc--------
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-----------KKFVGIGIGR--------  119 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----------lkl~dfg~~~--------  119 (188)
                      |.+|+|..+        +..++.++ +|++.||+|||+.+       |+|+           +|++|||++.        
T Consensus        95 ~~gg~L~~~i~~~~~l~~~~~~~~~-~qi~~al~yLH~~~ivHrDiKp~Nill~~~~~~~~~vkl~DfG~a~~~~~~~~~  173 (293)
T d1jksa_          95 VAGGELFDFLAEKESLTEEEATEFL-KQILNGVYYLHSLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEF  173 (293)
T ss_dssp             CCSCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEESCSSSSSCCEEECCCTTCEECTTSCBC
T ss_pred             CCCccccchhccccccchhHHHHHH-HHHHHHHHhhhhcceeecccccceEEEecCCCcccceEecchhhhhhcCCCccc
Confidence            999999886        34567777 89999999999998       5555           6999999854        


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhc
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTL  179 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~  179 (188)
                        ..||+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+..|.+.-
T Consensus       174 ~~~~~t~~y--~APE~~~~~~-~~~~~DiwSlGvilyell~g~~Pf~~~~~~~~~~~i~~~~  232 (293)
T d1jksa_         174 KNIFGTPEF--VAPEIVNYEP-LGLEADMWSIGVITYILLSGASPFLGDTKQETLANVSAVN  232 (293)
T ss_dssp             SCCCCCGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHTTC
T ss_pred             cccCCCCcc--cCHHHHcCCC-CCCcccchhhhHHHHHHHcCCCCCCCCCHHHHHHHHHhcC
Confidence              4578889  9999998765 8999999999999999999999999998888887776543

>d1opja_ d.144.1.7 (A:) Abelsone tyrosine kinase (abl) {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Abelsone tyrosine kinase (abl)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=3.3e-35  Score=227.00  Aligned_cols=171  Identities=17%  Similarity=0.212  Sum_probs=132.4

Q ss_pred             cccccc-c----CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .    ++..++|.+++ .....+++.+|+++|++++|||||+++++|        .++...+++|||+.+|++
T Consensus        30 fg~Vy~a~~~~~~~~vAvK~i~~-~~~~~~~~~~E~~il~~l~HpnIv~~~~~~--------~~~~~~~iv~E~~~~g~l  100 (287)
T d1opja_          30 YGEVYEGVWKKYSLTVAVKTLKE-DTMEVEEFLKEAAVMKEIKHPNLVQLLGVC--------TREPPFYIITEFMTYGNL  100 (287)
T ss_dssp             TSSEEEEEEGGGTEEEEEEECCT-TCSCHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBH
T ss_pred             CeEEEEEEECCCCeEEEEEEECC-ccchHHHHHHHHHHHHhCCCCCEecCCccE--------eeCCeeEEEeecccCcch
Confidence            788988 2    22334444433 233457799999999999999999999986        456788999999999998


Q ss_pred             HHH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc------------ccc
Q psy7174          80 ARF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH------------VCT  123 (188)
Q Consensus        80 ~~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~------------~~~  123 (188)
                      ..+          +..+..++ .|++.||+|||+++       |+||       +||+|||+++.            .|+
T Consensus       101 ~~~l~~~~~~~~~~~~~~~i~-~qi~~gL~yLH~~~iiHrDlKp~NILl~~~~~~Kl~DFG~a~~~~~~~~~~~~~~~g~  179 (287)
T d1opja_         101 LDYLRECNRQEVSAVVLLYMA-TQISSAMEYLEKKNFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFP  179 (287)
T ss_dssp             HHHHHHSCTTTSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCCTTTCCSSSSEEETTEEEC
T ss_pred             HHHhhhccccchHHHHHHHHH-HHHHHHHHHHHHCCcccCccccCeEEECCCCcEEEccccceeecCCCCceeecccccc
Confidence            875          23456666 89999999999998       7777       59999998652            356


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      ..|  +|||++.+.. |+.++||||+||++|||+++ .+|+.+.+.......+......+.|..+|
T Consensus       180 ~~y--~aPE~~~~~~-~~~k~DiwS~Gv~l~ell~~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~  242 (287)
T d1opja_         180 IKW--TAPESLAYNK-FSIKSDVWAFGVLLWEIATYGMSPYPGIDLSQVYELLEKDYRMERPEGCP  242 (287)
T ss_dssp             GGG--CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             ccc--cChHHHcCCC-CCchhhhhhHHHHHHHHHhCCCCCCCcchHHHHHHHHhcCCCCCCCccch
Confidence            778  9999998766 99999999999999999985 55566666666666666666666665554

>d1k2pa_ d.144.1.7 (A:) Bruton's tyrosine kinase (Btk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Bruton's tyrosine kinase (Btk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.9e-35  Score=222.86  Aligned_cols=171  Identities=14%  Similarity=0.130  Sum_probs=139.5

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++..++|.+++. ....+++.+|++++++++||||++++|+|        .++...+++|||+.+|++.
T Consensus        17 fg~Vy~~~~~~~~~vAvK~l~~~-~~~~~~~~~Ev~~~~~l~HpnIv~~~g~~--------~~~~~~~iv~Ey~~~g~l~   87 (258)
T d1k2pa_          17 FGVVKYGKWRGQYDVAIKMIKEG-SMSEDEFIEEAKVMMNLSHEKLVQLYGVC--------TKQRPIFIITEYMANGCLL   87 (258)
T ss_dssp             TEEEEEEEETTTEEEEEEEEESS-SSCHHHHHHHHHHHHTCCCTTBCCEEEEE--------CCSSSEEEEEECCTTEEHH
T ss_pred             CeEEEEEEECCCCEEEEEEECcC-cCCHHHHHHHHHHHHhcCCCceeeEEEEE--------eeCCceEEEEEccCCCcHH
Confidence            788888 2   223445555443 33456799999999999999999999986        4467789999999999988


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------cccccc
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTLY  125 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~~  125 (188)
                      .+         +..+..++ .|+++||+|||+++       |+|+       +||+|||++.            ..+|..
T Consensus        88 ~~~~~~~~~~~~~~~~~i~-~qi~~gl~~LH~~~iiH~dlk~~Nill~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~t~~  166 (258)
T d1k2pa_          88 NYLREMRHRFQTQQLLEMC-KDVCEAMEYLESKQFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR  166 (258)
T ss_dssp             HHHHSGGGCCCHHHHHHHH-HHHHHHHHHHHHTTBCCSCCSGGGEEECTTCCEEECCCSSCCBCSSSSCCCCCCSCCCGG
T ss_pred             HhhhccccCCcHHHHHHHH-HHHHHHHHHHhhcCcccccccceeEEEcCCCcEEECcchhheeccCCCceeecccCCCCC
Confidence            75         34566677 89999999999998       5555       6999999864            346778


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||.+.+.. |+.++||||+||++|||++ |+.||.+.+..+...+|.+..+.+.|..+|
T Consensus       167 y--~aPE~~~~~~-~~~ksDiwS~G~~l~el~t~g~~Pf~~~~~~~~~~~i~~~~~~~~p~~~~  227 (258)
T d1k2pa_         167 W--SPPEVLMYSK-FSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIAQGLRLYRPHLAS  227 (258)
T ss_dssp             G--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             c--CCcHHhcCCC-CCcceeecccchhhHhHHhcCCCCCCCCCHHHHHHHHHhCCCCCCccccc
Confidence            9  9999998766 9999999999999999998 899999999998888898887777776654

>d1qpca_ d.144.1.7 (A:) Lymphocyte kinase (lck) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Lymphocyte kinase (lck)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.6e-35  Score=224.11  Aligned_cols=170  Identities=15%  Similarity=0.245  Sum_probs=134.6

Q ss_pred             cccccc-c---CCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .   ++.+++|.+++. ....+.+.+|++++++++|||||++++++         .+...+++|||+.+|+|.
T Consensus        26 fg~Vy~~~~~~~~~vAvK~~~~~-~~~~~~~~~E~~~l~~l~HpnIv~~~g~~---------~~~~~~iv~Ey~~~g~L~   95 (272)
T d1qpca_          26 FGEVWMGYYNGHTKVAVKSLKQG-SMSPDAFLAEANLMKQLQHQRLVRLYAVV---------TQEPIYIITEYMENGSLV   95 (272)
T ss_dssp             TEEEEEEEETTTEEEEEEEECTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE---------CSSSCEEEEECCTTCBHH
T ss_pred             CcEEEEEEECCCCEEEEEEEccC-cCCHHHHHHHHHHHHhCCCCCEeEEEeee---------ccCCeEEEEEeCCCCcHH
Confidence            788998 2   223334444332 23456799999999999999999999985         234679999999999998


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccccc
Q psy7174          81 RF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTL  124 (188)
Q Consensus        81 ~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~  124 (188)
                      .+          ...+..++ .||+.||.|||+++       |+||       +||+|||+++            ..||.
T Consensus        96 ~~~~~~~~~~l~~~~~~~i~-~qi~~gl~~lH~~~ivHrDiKp~NIll~~~~~~Kl~DFGla~~~~~~~~~~~~~~~gt~  174 (272)
T d1qpca_          96 DFLKTPSGIKLTINKLLDMA-AQIAEGMAFIEERNYIHRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI  174 (272)
T ss_dssp             HHTTSHHHHTCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTSCEEECCCTTCEECSSSCEECCTTCCCCT
T ss_pred             HHHhhcCCCCCCHHHHHHHH-HHHHHHHHHHHhCCcccCccchhheeeecccceeeccccceEEccCCccccccccCCcc
Confidence            74          24456667 89999999999988       6666       5999999864            34677


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||++.... |+.++|||||||++|||++ |.+|+...+..+.+..+......+.|+.+|
T Consensus       175 ~y--~APE~~~~~~-~~~~sDvwS~Gvvl~ellt~~~~~~~~~~~~~~~~~i~~~~~~~~p~~~~  236 (272)
T d1qpca_         175 KW--TAPEAINYGT-FTIKSDVWSFGILLTEIVTHGRIPYPGMTNPEVIQNLERGYRMVRPDNCP  236 (272)
T ss_dssp             TT--SCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTCC
T ss_pred             cc--cChHHHhCCC-CCchhhhhhhHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCcccCh
Confidence            89  9999998765 9999999999999999998 577788888888888888777777776654

>d1rdqe_ d.144.1.7 (E:) cAMP-dependent PK, catalytic subunit {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: cAMP-dependent PK, catalytic subunit
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=7.3e-35  Score=230.72  Aligned_cols=164  Identities=16%  Similarity=0.214  Sum_probs=135.4

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+.+.   .....+.+.+|+++|+.++||||+++++++        .+....++++||+.+
T Consensus        54 fg~Vy~a~~~~~g~~~AvK~i~~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~--------~~~~~~~~v~e~~~~  125 (350)
T d1rdqe_          54 FGRVMLVKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSF--------KDNSNLYMVMEYVAG  125 (350)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHTTCHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCTT
T ss_pred             CcEEEEEEECCCCCEEEEEEEchHHccCHHHHHHHHHHHHHHHHcCCCcEeeccccc--------ccccccccccccccc
Confidence            788998 2    333445544432   234456789999999999999999999986        456778999999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccc
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYC  126 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y  126 (188)
                      |++...        +..++.++ .||+.||.|||+++       |+||       +||+|||+++        ..||+.|
T Consensus       126 g~l~~~l~~~~~l~e~~~~~i~-~qi~~aL~yLH~~~iiHRDIKP~NILl~~~g~ikL~DFG~a~~~~~~~~~~~Gt~~Y  204 (350)
T d1rdqe_         126 GEMFSHLRRIGRFSEPHARFYA-AQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPEA  204 (350)
T ss_dssp             CBHHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTSCEEECCCTTCEECSSCBCCCEECGGG
T ss_pred             cchhhhHhhcCCCCHHHHHHHH-HHHHHHHHHHHhCCEecCcCCHHHcccCCCCCEEeeeceeeeecccccccccCcccc
Confidence            998775        35677788 89999999999998       6776       5999999865        5689999


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                        +|||++.+.. |+.++||||+||++|||++|++||.+.+....+.+|.....
T Consensus       205 --~APE~~~~~~-~~~~~DiwSlGvilyemltG~~Pf~~~~~~~~~~~i~~~~~  255 (350)
T d1rdqe_         205 --LAPEIILSKG-YNKAVDWWALGVLIYEMAAGYPPFFADQPIQIYEKIVSGKV  255 (350)
T ss_dssp             --CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHCCC
T ss_pred             --CCHHHHcCCC-CCccccccchhHHHHHHHhCCCCCCCcCHHHHHHHHhcCCC
Confidence              9999998865 99999999999999999999999999998888888876543

>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.5e-34  Score=224.31  Aligned_cols=173  Identities=30%  Similarity=0.547  Sum_probs=140.9

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.++..  .....+++.+|+++|++++||||++++++|        .++...+++|||+.++
T Consensus        15 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~Hp~Iv~~~~~~--------~~~~~~~iv~e~~~~~   86 (298)
T d1gz8a_          15 YGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPNIVKLLDVI--------HTENKLYLVFEFLHQD   86 (298)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEC-------CCHHHHHHHHHHTTCCCTTBCCEEEEE--------EETTEEEEEEECCSEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEEecccc--------ccccceeEEEeecCCc
Confidence            899998 2    333445544332  233467889999999999999999999986        4467889999999887


Q ss_pred             cHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccc
Q psy7174          78 TKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCT  123 (188)
Q Consensus        78 ~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~  123 (188)
                      .+...         +..++.++ .|++.||.|||+.+       |+||       +|++|||++.           ..||
T Consensus        87 ~~~~~~~~~~~~l~e~~~~~~~-~qil~~L~yLH~~~IiHrDiKpeNIl~~~~~~~kl~DFG~a~~~~~~~~~~~~~~gt  165 (298)
T d1gz8a_          87 LKKFMDASALTGIPLPLIKSYL-FQLLQGLAFCHSHRVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVT  165 (298)
T ss_dssp             HHHHHHHTTTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECSTTHHHHHCCCSBCTTCCBCC
T ss_pred             hhhhhhhhcccCCCHHHHHHHH-HHHHHHHHHhhcCCEEccccCchheeecccCcceeccCCcceeccCCcccceeeccc
Confidence            66653         46677888 89999999999998       7777       4999999753           4688


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      +.|  +|||++.....++.++|+||+||++|+|++|++||.+.+..+.+.++.+..+.|....|+
T Consensus       166 ~~y--~apE~~~~~~~~~~~~DiwSlGvily~m~~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~  228 (298)
T d1gz8a_         166 LWY--RAPEILLGCKYYSTAVDIWSLGCIFAEMVTRRALFPGDSEIDQLFRIFRTLGTPDEVVWP  228 (298)
T ss_dssp             CTT--CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             cee--eehhhhccccCCCccccccccchhhhHHhhCCCCCCCCCHHHHHHHHHHhcCCCchhhcc
Confidence            999  999998776657899999999999999999999999999999999999988888877664

>d1mqba_ d.144.1.7 (A:) epha2 receptor tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: epha2 receptor tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.3e-34  Score=220.93  Aligned_cols=172  Identities=15%  Similarity=0.167  Sum_probs=133.9

Q ss_pred             cccccc-c----C-Cccccccccc---c-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-Q----S-KWSPNTPMAR---C-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-~----~-~~~~~~~i~~---~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+ .    + +....+|+|+   . ..+..+++.+|++++++++|||||+++|++        .+....++++||+
T Consensus        20 fG~Vy~~~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~il~~l~H~nIv~~~g~~--------~~~~~~~~v~e~~   91 (283)
T d1mqba_          20 FGEVYKGMLKTSSGKKEVPVAIKTLKAGYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVI--------SKYKPMMIITEYM   91 (283)
T ss_dssp             SSEEEEEEEEC---CCEEEEEEEEECTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSEEEEEECC
T ss_pred             CeEEEEEEEeCCCCEEEEEEEEEEECcccChHHHHHHHHHHHHHHhcCCCCEeeeeEEE--------ecCCceEEEEEec
Confidence            788887 1    1 1112344554   2 344556789999999999999999999986        4466789999999


Q ss_pred             ccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------
Q psy7174          75 TKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        75 ~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------  119 (188)
                      .++++...         ...+..++ .|++.||.|||+++       |+||       +||+|||+++            
T Consensus        92 ~~~~l~~~~~~~~~~~~~~~~~~i~-~~i~~gl~~lH~~~iiHrDlKp~NILl~~~~~~Kl~DFGla~~~~~~~~~~~~~  170 (283)
T d1mqba_          92 ENGALDKFLREKDGEFSVLQLVGML-RGIAAGMKYLANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTT  170 (283)
T ss_dssp             TTEEHHHHHHHTTTCSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC--------------
T ss_pred             ccCcchhhhhcccccccHHHHHHHH-HHHHHhhhhccccccccCccccceEEECCCCeEEEcccchhhcccCCCccceEe
Confidence            99998775         23455666 79999999999988       6666       5999999864            


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                        ..||..|  +|||++.+.. ++.++|||||||++|||++ |.+|+.+.+..+.+..+....+.|.|..+|
T Consensus       171 ~~~~gt~~Y--~APE~l~~~~-~~~~sDI~S~Gvil~el~t~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  239 (283)
T d1mqba_         171 SGGKIPIRW--TAPEAISYRK-FTSASDVWSFGIVMWEVMTYGERPYWELSNHEVMKAINDGFRLPTPMDCP  239 (283)
T ss_dssp             ---CCCGGG--SCHHHHHSCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTTCCCCCCTTCB
T ss_pred             ccCCCCccc--cCHHHHccCC-CCCcccccccHHHHHHHHhCCCCccccCCHHHHHHHHhccCCCCCchhhH
Confidence              2357789  9999998765 9999999999999999998 567777777777888887777777777664

>d1mp8a_ d.144.1.7 (A:) Focal adhesion kinase 1 (fak) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Focal adhesion kinase 1 (fak)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2e-34  Score=220.98  Aligned_cols=171  Identities=19%  Similarity=0.252  Sum_probs=131.9

Q ss_pred             cccccc-cC---Cc-cccccccc---c-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QS---KW-SPNTPMAR---C-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~---~~-~~~~~i~~---~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..   +. ...+++|.   . .....+.+.+|++++++++||||++++++|         .+...+++|||+.
T Consensus        20 fg~Vy~a~~~~~~~~~~~vaik~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~~~~---------~~~~~~iv~E~~~   90 (273)
T d1mp8a_          20 FGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLIGVI---------TENPVWIIMELCT   90 (273)
T ss_dssp             SSEEEEEEECCC--CCEEEEEEECTTTTSHHHHHHHHHHHHHHHTCCCTTBCCEEEEE---------CSSSCEEEEECCT
T ss_pred             CcEEEEEEEecCCceeEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEE---------ecCeEEEEEEecc
Confidence            788887 11   11 12344443   2 344557789999999999999999999985         2356899999999


Q ss_pred             cccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------c
Q psy7174          76 KTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------H  120 (188)
Q Consensus        76 ~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~  120 (188)
                      +|++..+         +..+..++ .|+++||.|||+++       |+||       +|++|||++.            .
T Consensus        91 ~g~l~~~~~~~~~~l~~~~~~~~~-~qi~~gl~ylH~~~iiHrDlKp~NIll~~~~~~Kl~DfG~a~~~~~~~~~~~~~~  169 (273)
T d1mp8a_          91 LGELRSFLQVRKYSLDLASLILYA-YQLSTALAYLESKRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKG  169 (273)
T ss_dssp             TEEHHHHHHHTTTTSCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEEETTEEEECC------------------
T ss_pred             CCcHHhhhhccCCCCCHHHHHHHH-HHHHHHhhhhcccCeeccccchhheeecCCCcEEEccchhheeccCCcceeccce
Confidence            9999875         34566677 79999999999998       6666       5999999854            3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .||..|  +|||++.+.. |+.++|||||||++|||++ |.+||.+.+..+...++......|.|..+|
T Consensus       170 ~gt~~y--~apE~l~~~~-~~~~~DiwSlGvil~e~lt~g~~P~~~~~~~~~~~~i~~~~~~~~~~~~~  235 (273)
T d1mp8a_         170 KLPIKW--MAPESINFRR-FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIGRIENGERLPMPPNCP  235 (273)
T ss_dssp             -CCGGG--CCHHHHHHCC-CSHHHHHHHHHHHHHHHHTTSCCTTTTCCGGGHHHHHHTTCCCCCCTTCC
T ss_pred             ecCccc--chhhHhccCC-CCCccccccchHHHHHHHhcCCCCCCCCCHHHHHHHHHcCCCCCCCCCCC
Confidence            457789  9999998765 9999999999999999997 899999999988888888777777766665

>d1tkia_ d.144.1.7 (A:) Titin, kinase domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Titin, kinase domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=7.4e-35  Score=228.27  Aligned_cols=165  Identities=16%  Similarity=0.064  Sum_probs=134.3

Q ss_pred             cccccc-cCC----ccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccH
Q psy7174           5 CFKPFQ-QSK----WSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTK   79 (188)
Q Consensus         5 ~g~v~~-~~~----~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l   79 (188)
                      ||.||+ .++    ..++|.+++. ....+.+.+|+++|++++||||++++++|        .++...|+|||||.+|+|
T Consensus        18 fg~Vy~~~~~~~~~~~AiK~i~~~-~~~~~~~~~Ei~il~~l~HpnIv~~~~~~--------~~~~~~~lvmE~~~gg~L   88 (321)
T d1tkia_          18 FGIVHRCVETSSKKTYMAKFVKVK-GTDQVLVKKEISILNIARHRNILHLHESF--------ESMEELVMIFEFISGLDI   88 (321)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECCC-THHHHHHHHHHHHHHHSCCTTBCCEEEEE--------EETTEEEEEECCCCCCBH
T ss_pred             CeEEEEEEECCCCcEEEEEEEcCC-cccHHHHHHHHHHHHhCCCCCCCeEEEEE--------EECCEEEEEEecCCCCcH
Confidence            788888 332    3334444432 23345688999999999999999999986        456789999999999999


Q ss_pred             HHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe---------EEEecCCccc----------ccccc
Q psy7174          80 ARF---------YSHLRYLENQQILEGLQALKSSM-------PALL---------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        80 ~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i---------lkl~dfg~~~----------~~~~~  124 (188)
                      ..+         +..++.++ .||+.||+|||+++       |+||         +|++|||++.          ..+++
T Consensus        89 ~~~i~~~~~~l~e~~~~~i~-~qi~~al~yLH~~~iiHrDlKp~NIll~~~~~~~ikl~DFG~~~~~~~~~~~~~~~~t~  167 (321)
T d1tkia_          89 FERINTSAFELNEREIVSYV-HQVCEALQFLHSHNIGHFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAP  167 (321)
T ss_dssp             HHHHTSSSCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEESSSSCCCEEECCCTTCEECCTTCEEEEEESCG
T ss_pred             HHHHHhcCCCCCHHHHHHHH-HHHHHHHHHHHHcCCCcccccccceeecCCCceEEEEcccchhhccccCCccccccccc
Confidence            875         45677788 89999999999998       6666         5899999854          45788


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTP  182 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p  182 (188)
                      .|  +|||.+.+.. |+.++||||+||++|+|++|.+||.+.+..+.+.+|.+....+
T Consensus       168 ~y--~ape~~~~~~-~~~~~DiWSlGvily~ll~G~~Pf~~~~~~~~~~~i~~~~~~~  222 (321)
T d1tkia_         168 EY--YAPEVHQHDV-VSTATDMWSLGTLVYVLLSGINPFLAETNQQIIENIMNAEYTF  222 (321)
T ss_dssp             GG--SCHHHHTTCE-ECHHHHHHHHHHHHHHHHHSSCTTCCSSHHHHHHHHHHTCCCC
T ss_pred             cc--ccchhccCCC-CCchhhcccHHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCCC
Confidence            89  9999998765 9999999999999999999999999999988888887654433

>d1blxa_ d.144.1.7 (A:) Cyclin-dependent PK, CDK6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.2e-34  Score=225.30  Aligned_cols=177  Identities=26%  Similarity=0.490  Sum_probs=141.2

Q ss_pred             cccccc-cC-----Ccccccccccc--chhhhhHHHHHHHHHHhC---CCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QS-----KWSPNTPMARC--DVNVETQAKAEGKQDRRL---DYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~-----~~~~~~~i~~~--~~~~~~~~~~E~~il~~l---~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .+     ++.++|.++..  .......+.+|+++|+.+   +||||++++++|...   ....+...++++|+
T Consensus        20 fg~V~~a~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~E~~~l~~l~~~~HpnIv~~~~~~~~~---~~~~~~~~~~~~e~   96 (305)
T d1blxa_          20 YGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVRLFDVCTVS---RTDRETKLTLVFEH   96 (305)
T ss_dssp             TEEEEEEEETTTTTEEEEEEEEEEEBCTTSCBCTHHHHHHHHHHHHHTCCTTBCCEEEEEEEE---ECSSEEEEEEEEEC
T ss_pred             CeEEEEEEEECCCCEEEEEEEEehhhccchHHHHHHHHHHHHHHHhhcCCCCcceeeeeeccc---ccccCceEEEEEEe
Confidence            788998 22     23344444432  233445678888887766   799999999987432   12334678999999


Q ss_pred             cccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------c
Q psy7174          74 FTKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------H  120 (188)
Q Consensus        74 ~~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~  120 (188)
                      +.++++...         +..++.++ +|++.||+|||+++       |+||       +|++|||++.          .
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~~~~~~-~qi~~aL~yLH~~~ivHrDiKp~NILi~~~~~~kl~dfg~~~~~~~~~~~~~~  175 (305)
T d1blxa_          97 VDQDLTTYLDKVPEPGVPTETIKDMM-FQLLRGLDFLHSHRVVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSV  175 (305)
T ss_dssp             CSCBHHHHHHHSCTTCSCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECSCCSCCCCCGGGGGCCC
T ss_pred             ccCCchhhhhhccCCCCCHHHHHHHH-HHHHHHHHHHHhCCEEecCCCccEEEEcCCCCeeecchhhhhhhcccccCCCc
Confidence            999887654         45677788 89999999999998       7777       4999999754          5


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .||+.|  +|||++.+.+ |+.++||||+||++|||++|++||.+.++.+++.+|.+..+.|.+..||
T Consensus       176 ~gT~~Y--~APE~~~~~~-y~~~~DiwSlG~il~ell~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  240 (305)
T d1blxa_         176 VVTLWY--RAPEVLLQSS-YATPVDLWSVGCIFAEMFRRKPLFRGSSDVDQLGKILDVIGLPGEEDWP  240 (305)
T ss_dssp             CCCCTT--CCHHHHTTCC-CCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCGGGSC
T ss_pred             ccChhh--cCcchhcCCC-CChhehhhchHHHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCchhccc
Confidence            689999  9999998866 9999999999999999999999999999999999999999888877775

>d1o6ya_ d.144.1.7 (A:) Mycobacterial protein kinase PknB, catalytic domain {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Mycobacterial protein kinase PknB, catalytic domain
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=100.00  E-value=3.6e-34  Score=220.00  Aligned_cols=169  Identities=17%  Similarity=0.175  Sum_probs=130.4

Q ss_pred             cccccc-c----CCcccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTK   76 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~   76 (188)
                      ||.||+ .    ++..++|.+++.   .....+++.+|+++++.++||||+++++++...    .......|++|||+.+
T Consensus        20 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~~E~~~l~~~~hpniv~~~~~~~~~----~~~~~~~~lvmE~~~g   95 (277)
T d1o6ya_          20 MSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAVYDTGEAE----TPAGPLPYIVMEYVDG   95 (277)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSTTTTCHHHHHHHHHHHHHHHTCCCTTBCCEEEEEEEE----CSSSEEEEEEEECCCE
T ss_pred             CeEEEEEEECCCCCEEEEEEEchhhccCHHHHHHHHHHHHHHHhcCCCCCCcccceeeec----cCCCceEEEEEECCCC
Confidence            788888 2    334445555542   234456789999999999999999999986331    1223357899999999


Q ss_pred             ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCeE-------EEecCCccc--------------c
Q psy7174          77 TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALLK-------KFVGIGIGR--------------H  120 (188)
Q Consensus        77 ~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~il-------kl~dfg~~~--------------~  120 (188)
                      ++|...        +..+..++ .|++.||.|||+++       |+||+       +++|||...              .
T Consensus        96 ~~L~~~~~~~~~l~~~~~~~i~-~qi~~al~~lH~~~iiHrDiKP~NIll~~~~~~~l~d~~~~~~~~~~~~~~~~~~~~  174 (277)
T d1o6ya_          96 VTLRDIVHTEGPMTPKRAIEVI-ADACQALNFSHQNGIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAV  174 (277)
T ss_dssp             EEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEETTSCEEECCCTTCEECC------------
T ss_pred             CEehhhhcccCCCCHHHHHHHH-HHHHHHHHHHHhCCccCccccCcccccCccccceeehhhhhhhhccccccccccccc
Confidence            999875        34567777 89999999999998       77874       899999632              4


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGT  181 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~  181 (188)
                      .||+.|  +|||++.+.. |+.++||||+||++|||++|++||.+.+..+.+.++.+.-..
T Consensus       175 ~Gt~~Y--~aPE~~~~~~-~~~~~DiwSlGvilyelltG~~Pf~~~~~~~~~~~~~~~~~~  232 (277)
T d1o6ya_         175 IGTAQY--LSPEQARGDS-VDARSDVYSLGCVLYEVLTGEPPFTGDSPVSVAYQHVREDPI  232 (277)
T ss_dssp             ----TT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHCCCC
T ss_pred             cCcccc--cCHHHHcCCC-CCcceecccchHHHHHHHhCCCCCCCcCHHHHHHHHHhcCCC
Confidence            689999  9999998765 999999999999999999999999999888887777665433

>d1rjba_ d.144.1.7 (A:) Fl cytokine receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fl cytokine receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.2e-34  Score=223.32  Aligned_cols=153  Identities=18%  Similarity=0.238  Sum_probs=121.3

Q ss_pred             chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------------------
Q psy7174          24 DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------------------   83 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------------------   83 (188)
                      .....+.+.+|+++|+++ +|||||+++++|        .+....+++||||.+|+|..+.                   
T Consensus        80 ~~~~~~~~~~E~~~l~~l~~HpnIv~l~~~~--------~~~~~~~lv~Ey~~~g~L~~~l~~~~~~~~~~~~~~~~~~~  151 (325)
T d1rjba_          80 DSSEREALMSELKMMTQLGSHENIVNLLGAC--------TLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKR  151 (325)
T ss_dssp             ----CHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTCBHHHHHHTTTTCC------------
T ss_pred             CHHHHHHHHHHHHHHHHhcCCCcEeEEEEEE--------eeCCeEEEEEEcCCCCcHHHHHHhccCCCcchhhhhccccc
Confidence            344556789999999998 899999999986        4567889999999999998753                   


Q ss_pred             ------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccc
Q psy7174          84 ------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTL  124 (188)
Q Consensus        84 ------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~  124 (188)
                                  ..+..++ .|++.||+|||+++       |+|+       +||+|||+++             ..||+
T Consensus       152 ~~~~~~~~~l~~~~~~~i~-~qi~~gl~yLH~~~IiHRDlKp~Nill~~~~~~Kl~DFGla~~~~~~~~~~~~~~~~gt~  230 (325)
T d1rjba_         152 LEEEEDLNVLTFEDLLCFA-YQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRGNARLPV  230 (325)
T ss_dssp             ---------CCHHHHHHHH-HHHHHHHHHHHHTTEEETTCSGGGEEEETTTEEEECCCGGGSCGGGCTTSEEETTEEECG
T ss_pred             cccccccCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeccCchhccccccCCeEEEeeccccccccCCCceeeeccccCCC
Confidence                        2355566 79999999999998       6666       5999999864             33578


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHh-hcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQ-TLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~-~~~~p~~~~~p  188 (188)
                      .|  +|||++.+.. |+.++|||||||++|||++ |++||.+.+..+.+.++.+ ....+.|..+|
T Consensus       231 ~y--~aPE~l~~~~-~~~~~DiwS~Gvil~emlt~g~~Pf~~~~~~~~~~~~~~~~~~~~~p~~~~  293 (325)
T d1rjba_         231 KW--MAPESLFEGI-YTIKSDVWSYGILLWEIFSLGVNPYPGIPVDANFYKLIQNGFKMDQPFYAT  293 (325)
T ss_dssp             GG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHTTTSCCSSTTCCCSHHHHHHHHTTCCCCCCTTCC
T ss_pred             cc--CChHHHcCCC-CCcceeccchhHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCCCcCC
Confidence            89  9999998765 9999999999999999997 8999998777666666654 44444454443

>d1xjda_ d.144.1.7 (A:) Protein kinase C, theta type {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase C, theta type
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9e-34  Score=221.95  Aligned_cols=162  Identities=17%  Similarity=0.232  Sum_probs=132.2

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHHHHHHHH-hCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKAEGKQDR-RLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~E~~il~-~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+     +++..++|.+++.   ..+..+.+.+|..++. .++||||+++++++        .++...|+||||+.
T Consensus        15 fg~Vy~~~~~~t~~~vAvK~i~k~~~~~~~~~~~~~~e~~~l~~~~~hp~Iv~~~~~~--------~~~~~~yivmEy~~   86 (320)
T d1xjda_          15 FGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTHMFCTF--------QTKENLFFVMEYLN   86 (320)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEEHHHHHHTTCHHHHHHHHHHHHHHTTCTTBCCEEEEE--------ECSSEEEEEEECCT
T ss_pred             CcEEEEEEECCCCCEEEEEEEchhhccChHHHHHHHHHHHHHHHhCCCCcEEEEEEEE--------ccCCceeEEEeecC
Confidence            788998     2333445555442   2334556778888776 68999999999986        55678999999999


Q ss_pred             cccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccc
Q psy7174          76 KTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVC  122 (188)
Q Consensus        76 ~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~  122 (188)
                      +|+|..+        +..++.++ .||+.||.|||+++       |+|+       +|++|||++.           ..|
T Consensus        87 ~g~L~~~i~~~~~~~e~~~~~~~-~qi~~al~ylH~~~iiHrDikp~NiL~~~~~~~kl~DFG~a~~~~~~~~~~~~~~g  165 (320)
T d1xjda_          87 GGDLMYHIQSCHKFDLSRATFYA-AEIILGLQFLHSKGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNTFCG  165 (320)
T ss_dssp             TCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTCBCCCCCGGGEEECTTSCEEECCCTTCBCCCCTTCCBCCCCS
T ss_pred             CCcHHHHhhccCCCCHHHHHHHH-HHHHHHHHHHHhCCeeeccCcccceeecCCCceeccccchhhhcccccccccccCC
Confidence            9999986        45677787 89999999999998       6666       5999999854           467


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQT  178 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~  178 (188)
                      |+.|  +|||++.+.. |+.++||||+||++|+|++|+.||.+.+..+...+|...
T Consensus       166 t~~y--~aPE~~~~~~-~~~~~DiwSlGvilyemltG~~PF~~~~~~~~~~~i~~~  218 (320)
T d1xjda_         166 TPDY--IAPEILLGQK-YNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMD  218 (320)
T ss_dssp             CGGG--CCHHHHTTCC-BCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHC
T ss_pred             CCCc--CCHHHHcCCC-CCchhhhhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHcC
Confidence            8999  9999998866 999999999999999999999999999988888777543

>d1xkka_ d.144.1.7 (A:) EGF receptor tyrosine kinase, Erbb-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: EGF receptor tyrosine kinase, Erbb-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.2e-34  Score=221.93  Aligned_cols=171  Identities=13%  Similarity=0.147  Sum_probs=132.6

Q ss_pred             cccccc-----cCCccc-cccccc---c-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecc
Q psy7174           5 CFKPFQ-----QSKWSP-NTPMAR---C-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIF   74 (188)
Q Consensus         5 ~g~v~~-----~~~~~~-~~~i~~---~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~   74 (188)
                      ||.||+     +++..+ .+++|+   . ..+..+++.+|++++++++|||||+++|+|.         +...++++|++
T Consensus        22 fG~Vy~~~~~~~~~~~~~~vavK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~l~g~~~---------~~~~~~v~e~~   92 (317)
T d1xkka_          22 FGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVCRLLGICL---------TSTVQLITQLM   92 (317)
T ss_dssp             SEEEEEEEECC----CCEEEEEEEECC----CTHHHHHHHHHHHHHCCCTTBCCEEEEEE---------SSSEEEEEECC
T ss_pred             CeEEEEEEEcCCCCEEEEEEEEEEeccccCHHHHHHHHHHHHHHHhCCCCCEeeEEEEEe---------cCCeeEEEEec
Confidence            788987     222222 334443   2 3455678999999999999999999999862         23578899999


Q ss_pred             ccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------
Q psy7174          75 TKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------  119 (188)
Q Consensus        75 ~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------  119 (188)
                      .++++...         +..+..++ .||+.||.|||+++       |+|+       +||+|||++.            
T Consensus        93 ~~~~l~~~~~~~~~~~~~~~~~~i~-~qi~~gl~yLH~~~iiHrDlKp~NIll~~~~~~kl~DFGla~~~~~~~~~~~~~  171 (317)
T d1xkka_          93 PFGCLLDYVREHKDNIGSQYLLNWC-VQIAKGMNYLEDRRLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAE  171 (317)
T ss_dssp             TTCBHHHHHHHTSSSCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEEEETTEEEECCCSHHHHTTTTCC-----
T ss_pred             cCCcccccccccccCCCHHHHHHHH-HHHHHHHHHHHHcCcccCcchhhcceeCCCCCeEeeccccceeccccccccccc
Confidence            99998764         34466677 79999999999998       6777       5999999754            


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                       ..||..|  +|||++.+.. |+.++|||||||++|||++ |.+||.+.+..+....+.+..+.|.|..+|
T Consensus       172 ~~~gt~~y--~APE~l~~~~-~~~~sDvwS~Gvil~el~t~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~~  239 (317)
T d1xkka_         172 GGKVPIKW--MALESILHRI-YTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQPPICT  239 (317)
T ss_dssp             ---CCTTT--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCTTTTSCGGGHHHHHHHTCCCCCCTTBC
T ss_pred             ccccCccc--cChHHHhcCC-CChhhhhhhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCcccC
Confidence             2467899  9999998865 9999999999999999998 899999888877777777777777766554

>d1ob3a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {(Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK2
species: (Plasmodium falciparum) [TaxId: 5833]

Probab=100.00  E-value=1.3e-33  Score=217.69  Aligned_cols=173  Identities=27%  Similarity=0.488  Sum_probs=143.2

Q ss_pred             cccccc-c---CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-Q---SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-~---~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+ .   ++..++|.+...  .....+.+.+|+++|++++||||++++++|        .++...++++|++.+++
T Consensus        15 fg~Vy~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~hpnIv~~~~~~--------~~~~~~~i~~e~~~~~~   86 (286)
T d1ob3a_          15 YGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDVI--------HTKKRLVLVFEHLDQDL   86 (286)
T ss_dssp             TEEEEEEEETTSCEEEEEEECCSSGGGCCCHHHHHHHHGGGGCCCTTBCCEEEEE--------ECSSCEEEEEECCSEEH
T ss_pred             CcEEEEEEeCCCCEEEEEEEehhhcChHHHHHHHHHHHHHHhCCCCcEEeeeeec--------ccCCceeEEEEeehhhh
Confidence            788998 2   333445544332  334457899999999999999999999986        45678899999999988


Q ss_pred             HHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------cccccc
Q psy7174          79 KARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTLY  125 (188)
Q Consensus        79 l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~~  125 (188)
                      +..+        +..+..++ +|++.||+|||+++       |+||       +|++|||.+.           ..+++.
T Consensus        87 ~~~~~~~~~~l~~~~~~~i~-~qi~~~L~~LH~~~IvHrDiKp~NIll~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~~  165 (286)
T d1ob3a_          87 KKLLDVCEGGLESVTAKSFL-LQLLNGIAYCHDRRVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLW  165 (286)
T ss_dssp             HHHHHTSTTCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTSCEEECCTTHHHHHCC---------CCCT
T ss_pred             HHHHHhhcCCcchhhhHHHH-HHHHHHHHHhccCcEEecCCCCceeeEcCCCCEEecccccceecccCccccceecccch
Confidence            8775        46677788 89999999999998       7777       5999999743           357788


Q ss_pred             ccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         126 CTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       126 y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |  +|||.+.+...++.++|+||+||++|||++|++||.+.+..+++.++....+.|+...||
T Consensus       166 y--~~pE~~~~~~~~~~~~DiwslGv~l~el~~G~~pf~~~~~~~~~~~i~~~~~~~~~~~~~  226 (286)
T d1ob3a_         166 Y--RAPDVLMGSKKYSTTIDIWSVGCIFAEMVNGTPLFPGVSEADQLMRIFRILGTPNSKNWP  226 (286)
T ss_dssp             T--CCHHHHTTCCSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTST
T ss_pred             h--hhHHHHhCCCCCCcceeehhcCcHHHHHHHCCCCCCCCCHHHHHHHHHHhhCCCChhhcc
Confidence            9  999999876668999999999999999999999999999999999999999888888775

>d3blha1 d.144.1.7 (A:8-325) Cell division protein kinase 9, CDK9 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cell division protein kinase 9, CDK9
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.2e-33  Score=219.24  Aligned_cols=180  Identities=25%  Similarity=0.420  Sum_probs=140.5

Q ss_pred             cccccc-c----CCccccccccc--cchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMAR--CDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~--~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+  ......+++.+|+++|++++||||+++++++..........+...+++||++.++
T Consensus        23 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~nii~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~  102 (318)
T d3blha1          23 FGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHD  102 (318)
T ss_dssp             SSEEEEEEETTTCCEEEEEEC----CTTSSCHHHHHHHHHHHHCCCTTBCCEEEEEEC----------CEEEEEECCCEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEehhhcchHHHHHHHHHHHHHHHhcCCCccceEeeeecccccccccCceEEEEEeccCCC
Confidence            789998 2    23334444433  2334556789999999999999999999987544333334456789999999988


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------------c
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------------H  120 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------------~  120 (188)
                      ++...        +..++.++ +|+++||.|||+++       |+||       +|++|||++.               .
T Consensus       103 ~~~~~~~~~~~~~~~~~~~i~-~qil~~l~~lH~~~ivHrDlKp~NILl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~  181 (318)
T d3blha1         103 LAGLLSNVLVKFTLSEIKRVM-QMLLNGLYYIHRNKILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYTNR  181 (318)
T ss_dssp             HHHHHTCTTCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTSCEEECCCTTCEECCC-----CCCCCSC
T ss_pred             ccchhhhcccccccHHHHHHH-HHHHHHHHHhccCCEEecCcCchheeecCCCcEEeeecceeeecccccccccccccce
Confidence            87764        56677888 89999999999988       6666       5999999853               3


Q ss_pred             cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         121 VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       121 ~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      .||..|  +|||++.+...|+.++||||+||++|||++|++||.+.++...+..+.+..+.++++.|
T Consensus       182 ~gT~~Y--~aPE~~~~~~~~~~k~DiwSlGvil~el~~g~~pf~~~~~~~~~~~i~~~~~~~~~~~~  246 (318)
T d3blha1         182 VVTLWY--RPPELLLGERDYGPPIDLWGAGCIMAEMWTRSPIMQGNTEQHQLALISQLCGSITPEVW  246 (318)
T ss_dssp             CSCGGG--CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCTTTS
T ss_pred             ecCHHH--hhHHHHcCCCCCCcHHHcccCCceeeeHhhCCCCCCCCCHHHHHHHHHHhcCCCChhhc
Confidence            578999  99999987656999999999999999999999999999999999999998888877655

>d1byga_ d.144.1.7 (A:) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=9.2e-34  Score=216.19  Aligned_cols=171  Identities=18%  Similarity=0.219  Sum_probs=131.9

Q ss_pred             cccccc---cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ---QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~---~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+   .++..++|.+++  ....+.+.+|++++++++||||++++|+|.+       +....++++||+.+|++..
T Consensus        20 fg~Vy~~~~~~~~vAvK~i~~--~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~~lv~ey~~~g~L~~   90 (262)
T d1byga_          20 FGDVMLGDYRGNKVAVKCIKN--DATAQAFLAEASVMTQLRHSNLVQLLGVIVE-------EKGGLYIVTEYMAKGSLVD   90 (262)
T ss_dssp             SCEEEEEEETTEEEEEEECCC--CC--HHHHHTHHHHTTCCCTTBCCEEEEECC-------C--CCEEEECCCTTEEHHH
T ss_pred             CeEEEEEEECCeEEEEEEECc--HHHHHHHHHHHHHHHhCCCCCEeeEEEEEEe-------cCCcEEEEEeccCCCCHHH
Confidence            788988   333334554443  3445779999999999999999999998632       2345799999999999988


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccCC
Q psy7174          82 FY----------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTRG  129 (188)
Q Consensus        82 ~~----------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~~  129 (188)
                      +.          ..+..++ .||+.||.|||+.+       |+|+       +|++|||+++        ..++..|  +
T Consensus        91 ~l~~~~~~~l~~~~~~~i~-~~i~~al~ylH~~~ivH~dlkp~Nil~~~~~~~kl~dfg~s~~~~~~~~~~~~~~~y--~  167 (262)
T d1byga_          91 YLRSRGRSVLGGDCLLKFS-LDVCEAMEYLEGNNFVHRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKW--T  167 (262)
T ss_dssp             HHHHHHHHHCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECTTSCEEECCCCC------------CCTTT--S
T ss_pred             HHHhcCCCCCCHHHHHHHH-HHHHhhccccccCceeccccchHhheecCCCCEeecccccceecCCCCccccccccC--C
Confidence            62          2355566 79999999999988       6666       5999999865        3457788  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      |||.+.+.. ++.++|||||||++|||++ |++||.+.+..+....|.+....+.|..+|
T Consensus       168 aPE~l~~~~-~t~~sDIwSfG~il~el~t~~~~p~~~~~~~~~~~~i~~~~~~~~~~~~~  226 (262)
T d1byga_         168 APEALREKK-FSTKSDVWSFGILLWEIYSFGRVPYPRIPLKDVVPRVEKGYKMDAPDGCP  226 (262)
T ss_dssp             CHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCTTSCGGGHHHHHTTTCCCCCCTTCC
T ss_pred             ChHHHhCCC-CChHHHHHhHHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCCccCC
Confidence            999998765 9999999999999999998 799999888888888887766666666554

>d1phka_ d.144.1.7 (A:) gamma-subunit of glycogen phosphorylase kinase (Phk) {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: gamma-subunit of glycogen phosphorylase kinase (Phk)
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=100.00  E-value=1.9e-33  Score=215.97  Aligned_cols=165  Identities=20%  Similarity=0.182  Sum_probs=132.1

Q ss_pred             cccccc-c----CCccccccccccc---------hhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEE
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARCD---------VNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYI   69 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~~---------~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~i   69 (188)
                      ||.||+ .    ++..++|.+.+..         ....+.+.+|+.++++++ ||||++++++|        .++...|+
T Consensus        16 ~g~V~~~~~~~~~~~~AvK~i~~~~~~~~~~~~~~~~~~~~~~E~~~l~~l~~hpnIv~~~~~~--------~~~~~~~i   87 (277)
T d1phka_          16 SSVVRRCIHKPTCKEYAVKIIDVTGGGSFSAEEVQELREATLKEVDILRKVSGHPNIIQLKDTY--------ETNTFFFL   87 (277)
T ss_dssp             SEEEEEEEETTTTEEEEEEEEETTCSTTCCHHHHHHHHHHHHHHHHHHHHHTTCTTBCCEEEEE--------ECSSEEEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEecccccchhHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeec--------ccCcceEE
Confidence            788888 2    2333455444421         123346889999999997 99999999986        45778899


Q ss_pred             EEeccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------
Q psy7174          70 VVKIFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------  119 (188)
Q Consensus        70 v~e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------  119 (188)
                      +|||+.+|+|..+        ++.++.++ .||+.||+|||+++       |+|+       +||+|||++.        
T Consensus        88 vmE~~~~g~L~~~l~~~~~l~e~~~~~~~-~qi~~al~~lH~~~ivHrDlkp~Nill~~~~~~kl~DFG~a~~~~~~~~~  166 (277)
T d1phka_          88 VFDLMKKGELFDYLTEKVTLSEKETRKIM-RALLEVICALHKLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPGEKL  166 (277)
T ss_dssp             EEECCTTCBHHHHHHHHSSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECTTCCEEECCCTTCEECCTTCCB
T ss_pred             EEEcCCCchHHHHHHhcCCCCHHHHHHHH-HHHHHHHHHHHHcCCcccccccceEEEcCCCCeEEccchheeEccCCCce
Confidence            9999999999876        45677788 89999999999998       6666       5999999854        


Q ss_pred             --ccccccccCCCCccccc-----cCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcC
Q psy7174         120 --HVCTLYCTRGAPELLFG-----ARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLG  180 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~-----~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~  180 (188)
                        ..||..|  +|||.+.+     ...++.++||||+||++|+|++|+.||.+.++......|...-.
T Consensus       167 ~~~~gt~~y--~~PE~~~~~~~~~~~~~~~~~DiwslGvilyeml~g~~Pf~~~~~~~~~~~i~~~~~  232 (277)
T d1phka_         167 REVCGTPSY--LAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPFWHRKQMLMLRMIMSGNY  232 (277)
T ss_dssp             CCCCSCGGG--CCHHHHHHHHCTTSCCBCTHHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHTCC
T ss_pred             eeeeccCCC--CCHHHhhccccccCCCCCchheEcccchhhhhhccCCCCCCCCCHHHHHHHHHhCCC
Confidence              4578889  99999853     23378899999999999999999999999999888888876543

>d1fmka3 d.144.1.7 (A:249-533) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-src tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=4.1e-33  Score=214.93  Aligned_cols=170  Identities=18%  Similarity=0.262  Sum_probs=134.5

Q ss_pred             cccccc----cCCccccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ----QSKWSPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~----~~~~~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+    .++.+++|.++.. ....+.+.+|+.++++++|||||+++++|         .+...+++|||+.+|++.
T Consensus        30 fg~Vy~~~~~~~~~vAiK~l~~~-~~~~~~~~~E~~~l~~l~h~nIv~~~g~~---------~~~~~~lv~Ey~~~g~l~   99 (285)
T d1fmka3          30 FGEVWMGTWNGTTRVAIKTLKPG-TMSPEAFLQEAQVMKKLRHEKLVQLYAVV---------SEEPIYIVTEYMSKGSLL   99 (285)
T ss_dssp             SCEEEEEEETTTEEEEEEECCTT-SSCHHHHHHHHHHHHHCCCTTBCCEEEEE---------CSSSCEEEECCCTTCBHH
T ss_pred             CeEEEEEEECCCCEEEEEEECcc-cCCHHHHHHHHHHHHhcccCCEeEEEEEE---------ecCCeEEEEEecCCCchh
Confidence            788888    2223345544432 33456799999999999999999999985         234679999999999987


Q ss_pred             HH----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc------------ccccc
Q psy7174          81 RF----------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR------------HVCTL  124 (188)
Q Consensus        81 ~~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~------------~~~~~  124 (188)
                      .+          ...+..++ .||+.||.|||+++       |+|+       +||+|||+++            ..||.
T Consensus       100 ~~~~~~~~~~l~~~~~~~i~-~~i~~gl~~LH~~~ivH~DlKp~NIll~~~~~~kl~DfGla~~~~~~~~~~~~~~~gt~  178 (285)
T d1fmka3         100 DFLKGETGKYLRLPQLVDMA-AQIASGMAYVERMNYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI  178 (285)
T ss_dssp             HHHSHHHHTTCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGGGCEEECCCCTTC--------------CCG
T ss_pred             hhhhhcccccchHHHHHHHH-HHHHHHHHHHhhhheecccccceEEEECCCCcEEEcccchhhhccCCCceeeccccccc
Confidence            65          24566666 89999999999998       6676       5999999864            34678


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  +|||.+.... ++.++||||+||++|||++ |.+|+.+.+..+.+..+.+....|.+..+|
T Consensus       179 ~y--~aPE~~~~~~-~~~ksDI~S~Giil~el~t~~~p~~~~~~~~~~~~~i~~~~~~~~~~~~~  240 (285)
T d1fmka3         179 KW--TAPEAALYGR-FTIKSDVWSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECP  240 (285)
T ss_dssp             GG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCHHHHHHHHHTTCCCCCCTTSC
T ss_pred             cc--cChHHHhCCC-CCcHHhhhcchHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCcccC
Confidence            89  9999998766 9999999999999999998 567778888888888888877777776654

>d1omwa3 d.144.1.7 (A:186-549) G-protein coupled receptor kinase 2 {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: G-protein coupled receptor kinase 2
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=1.9e-33  Score=223.57  Aligned_cols=153  Identities=16%  Similarity=0.170  Sum_probs=120.3

Q ss_pred             cccccc-----cCCcccccccccc---chhhhhHHHH---HHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC---DVNVETQAKA---EGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~---~~~~~~~~~~---E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+     +++..++|.+.+.   .......+.+   |+++++.++|||||+++++|        .++...|+||||
T Consensus        17 fg~Vy~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~~e~~~~~~l~~~~hpnIv~l~~~~--------~~~~~~~ivmE~   88 (364)
T d1omwa3          17 FGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIVCMSYAF--------HTPDKLSFILDL   88 (364)
T ss_dssp             SCEEEEEEETTTCCEEEEEEEEHHHHHHHTCHHHHHHHHHHHHHHSSSCCTTBCCEEEEE--------ECSSEEEEEECC
T ss_pred             CeEEEEEEECCCCCEEEEEEEchHHcchhhHHHHHHHHHHHHHHHhcCCCCcEEEEEEEE--------EECCEEEEEEEe
Confidence            789997     2344445555432   1122233444   46677788899999999986        456778999999


Q ss_pred             cccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc---------ccc
Q psy7174          74 FTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR---------HVC  122 (188)
Q Consensus        74 ~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~---------~~~  122 (188)
                      +.+|+|..+        +..++.++ .||+.||.|||+++       |+||       +||+|||++.         ..|
T Consensus        89 ~~gg~L~~~l~~~~~~~e~~~~~~~-~qi~~aL~ylH~~~iiHrDlKP~NILl~~~g~iKl~DFGla~~~~~~~~~~~~G  167 (364)
T d1omwa3          89 MNGGDLHYHLSQHGVFSEADMRFYA-AEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVG  167 (364)
T ss_dssp             CCSCBHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECSSSCEEECCCTTCEECSSSCCCSCCS
T ss_pred             cCCCcHHHHHHhcccccHHHHHHHH-HHHHHHHHHHHHCCccceeeccceeEEcCCCcEEEeeeceeeecCCCccccccc
Confidence            999999876        35677777 89999999999998       7777       5999999854         568


Q ss_pred             cccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         123 TLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       123 ~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      |+.|  +|||++.....|+.++||||+||++|||++|++||.+.+.
T Consensus       168 T~~y--~APE~~~~~~~~~~~~DiwSlGvilyemltG~~Pf~~~~~  211 (364)
T d1omwa3         168 THGY--MAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKT  211 (364)
T ss_dssp             CGGG--CCHHHHSTTCCCCTHHHHHHHHHHHHHHHHSSCSSCSSCS
T ss_pred             cccc--chhHHhhcCCCCCcccchhHHHHHHHHHHhCCCCCCCCCH
Confidence            9999  9999997655589999999999999999999999987543

>d1u46a_ d.144.1.7 (A:) Activated CDC42 kinase 1, ACK1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Activated CDC42 kinase 1, ACK1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8.6e-33  Score=211.93  Aligned_cols=171  Identities=18%  Similarity=0.142  Sum_probs=129.8

Q ss_pred             cccccc-c---C-Cc---ccccccccc---chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-Q---S-KW---SPNTPMARC---DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~---~-~~---~~~~~i~~~---~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ .   . +.   .++|.+++.   ..+..+++.+|+++|++++||||++++|+|.         +...++++||
T Consensus        21 fg~Vy~~~~~~~~~~~~~vAiK~l~~~~~~~~~~~~~~~~Ei~~l~~l~H~nIv~~~g~~~---------~~~~~lv~e~   91 (273)
T d1u46a_          21 FGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLIRLYGVVL---------TPPMKMVTEL   91 (273)
T ss_dssp             -CCCEEEEEECTTSCEEEEEEEC--------CHHHHHHHHHHHHHHHCCCTTBCCEEEEEC---------SSSCEEEEEC
T ss_pred             CeEEEEEEEECCCCcEEEEEEEEEChhhcCCHHHHHHHHHHHHHHHhCCCCCEEEEEEEEe---------ecchheeeee
Confidence            788987 1   1 11   234444442   2344567899999999999999999999862         2467999999


Q ss_pred             cccccHHHH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCcccc----------
Q psy7174          74 FTKTTKARF---------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGRH----------  120 (188)
Q Consensus        74 ~~~~~l~~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~~----------  120 (188)
                      +.+|++...         ...+..++ .|++.||.|||+++       |+|+       +|++|||+++.          
T Consensus        92 ~~~~~l~~~~~~~~~~l~~~~~~~~~-~qi~~gl~ylH~~~iiHrDikp~NIll~~~~~vkl~DfGl~~~~~~~~~~~~~  170 (273)
T d1u46a_          92 APLGSLLDRLRKHQGHFLLGTLSRYA-VQVAEGMGYLESKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVM  170 (273)
T ss_dssp             CTTCBHHHHHHHHGGGSCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEEEETTEEEECCCTTCEECCC-CCEEEC
T ss_pred             ecCcchhhhhhcccCCCCHHHHHHHH-HHHHHHHHHhhhCCEeeeeecHHHhccccccceeeccchhhhhcccCCCccee
Confidence            999998764         34556666 79999999999998       6666       59999998552          


Q ss_pred             ----cccccccCCCCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhh-cCCCCCCCCC
Q psy7174         121 ----VCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQT-LGTPSEDTWP  188 (188)
Q Consensus       121 ----~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~-~~~p~~~~~p  188 (188)
                          .++..|  +|||.+.+.. ++.++|||||||++|||++ |++||.+.+..+...+|.+. ...|.++.+|
T Consensus       171 ~~~~~~~~~~--~aPE~~~~~~-~~~~~Di~S~Gvil~emlt~G~~Pf~~~~~~~~~~~i~~~~~~~~~~~~~~  241 (273)
T d1u46a_         171 QEHRKVPFAW--CAPESLKTRT-FSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPRPEDCP  241 (273)
T ss_dssp             -----CCGGG--CCHHHHHHCE-EEHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHHHTSCCCCCCCTTCC
T ss_pred             cCccccCccc--CCHHHHhCCC-CCcchhhhhhHHHHHHHHhCCCCCCCCcCHHHHHHHHHhCCCCCCCccccc
Confidence                356678  9999998865 9999999999999999997 89999999999888888654 3344455554

>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2, mapkap2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase activated protein kinase 2, mapkap2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-33  Score=222.11  Aligned_cols=154  Identities=21%  Similarity=0.217  Sum_probs=121.4

Q ss_pred             cccccc-cCCccc-cccccccchhhhhHHHHHHHHHHh-CCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARCDVNVETQAKAEGKQDRR-LDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~~~~~~~~~~~E~~il~~-l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++... .+|+|..  +..+.+.+|++++.+ .+||||++++++|..    ....+...|++||||.+|+|..
T Consensus        25 fg~Vy~a~~~~~~~~vAiK~i--~~~~~~~~E~~~~~~~~~hpnIv~l~~~~~~----~~~~~~~~~ivmEy~~gg~L~~   98 (335)
T d2ozaa1          25 NGKVLQIFNKRTQEKFALKML--QDCPKARREVELHWRASQCPHIVRIVDVYEN----LYAGRKCLLIVMECLDGGELFS   98 (335)
T ss_dssp             SCEEEEEEETTTCCEEEEEEE--ECSHHHHHHHHHHHHHTTSTTBCCEEEEEEE----EETTEEEEEEEEECCCSEEHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEE--CCcHHHHHHHHHHHHhcCCCCCCeEEEEEee----cccCCCEEEEEEECCCCCcHHH
Confidence            788888 322222 4444442  234678899998765 589999999998622    1123467899999999999987


Q ss_pred             H----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc----------ccccc
Q psy7174          82 F----------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR----------HVCTL  124 (188)
Q Consensus        82 ~----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~----------~~~~~  124 (188)
                      +          +..++.++ +|++.||+|||+.+       |+||          +||+|||++.          ..||+
T Consensus        99 ~i~~~~~~~l~e~~~~~i~-~qi~~al~ylH~~~iiHRDiKp~NIll~~~~~~~~~Kl~DFG~a~~~~~~~~~~~~~gt~  177 (335)
T d2ozaa1          99 RIQDRGDQAFTEREASEIM-KSIGEAIQYLHSINIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYTP  177 (335)
T ss_dssp             HHHSCSCCCEEHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEESCSSTTCCEEECCCTTCEECCCCCCCCCCSCCC
T ss_pred             HHHhcCCCCcCHHHHHHHH-HHHHHHHHHHHHcCCccccccccccccccccccccccccccceeeeccCCCccccccCCc
Confidence            5          45677888 89999999999998       6665          5999999854          46899


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                      .|  +|||++.+.. |+.++||||+||++|+|++|++||.+.+.
T Consensus       178 ~y--~aPE~~~~~~-y~~~~DiwSlGvily~lltg~~Pf~~~~~  218 (335)
T d2ozaa1         178 YY--VAPEVLGPEK-YDKSCDMWSLGVIMYILLCGYPPFYSNHG  218 (335)
T ss_dssp             SS--CCCCCCCGGG-GSHHHHHHHHHHHHHHHTTSSCSCEETTC
T ss_pred             cc--CCcHHHcCCC-CCHHHHHHhhchhHHHHhhCCCCCCCCCH
Confidence            99  9999998765 99999999999999999999999976543

>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Glycogen synthase kinase-3 beta (Gsk3b)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-33  Score=221.39  Aligned_cols=174  Identities=27%  Similarity=0.401  Sum_probs=134.3

Q ss_pred             cccccc-cCCc-cccccccccchhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQ-QSKW-SPNTPMARCDVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~-~~~~-~~~~~i~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+ ..+- ...+|+|.... ..+...+|+++|++++||||++++++|+...  ...+....+++|||++++++..+
T Consensus        33 fg~Vy~a~~~~~~~~vAiK~i~~-~~~~~~~Ei~il~~l~h~niv~~~~~~~~~~--~~~~~~~~~lv~Ey~~~~~~~~l  109 (350)
T d1q5ka_          33 FGVVYQAKLCDSGELVAIKKVLQ-DKRFKNRELQIMRKLDHCNIVRLRYFFYSSG--EKKDEVYLNLVLDYVPETVYRVA  109 (350)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEC-CSSSCCHHHHHHHHCCCTTBCCEEEEEEEC----CCSCCEEEEEEECCSEEHHHHH
T ss_pred             CeEEEEEEECCCCCEEEEEEECc-cchHHHHHHHHHHhcCCCCCCcEEEEEEecC--ccCCceEEEEEEeccCCccHHHH
Confidence            788998 2221 22444444311 1233458999999999999999999875422  22344567899999998765443


Q ss_pred             -----------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------ccccccc
Q psy7174          83 -----------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYC  126 (188)
Q Consensus        83 -----------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y  126 (188)
                                 +..++.++ +|++.||+|||+++       |+||        +||+|||++.          ..|+..|
T Consensus       110 ~~~~~~~~~l~~~~~~~i~-~qil~aL~yLH~~~IiHrDiKp~NILl~~~~~~~kl~DFG~a~~~~~~~~~~~~~gt~~y  188 (350)
T d1q5ka_         110 RHYSRAKQTLPVIYVKLYM-YQLFRSLAYIHSFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYY  188 (350)
T ss_dssp             HHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCCGGGEEECTTTCCEEECCCTTCEECCTTSCCCSCCSCTTS
T ss_pred             HhhhhccCCCCHHHHHHHH-HHHHHHHHHHHhcCCcccCCCcceEEEecCCCceeEecccchhhccCCcccccccccccc
Confidence                       34577788 89999999999998       6666        5999999854          4578889


Q ss_pred             cCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         127 TRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       127 ~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                        +|||.+.+...|+.++||||+||++|||++|++||.+.+..+++.+|.+.++.|..
T Consensus       189 --~aPE~~~~~~~~~~~~DIwSlG~il~el~~g~~pf~~~~~~~~l~~i~~~~g~~~~  244 (350)
T d1q5ka_         189 --RAPELIFGATDYTSSIDVWSAGCVLAELLLGQPIFPGDSGVDQLVEIIKVLGTPTR  244 (350)
T ss_dssp             --CCHHHHTTCSSCCTHHHHHHHHHHHHHHHHTSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             --cChHHhhcccCCCcceeecccceEEEehhhCCCCCCCCCHHHHHHHHHHHhCCChH
Confidence              99999876556999999999999999999999999999999999999888777654

>d1cm8a_ d.144.1.7 (A:) MAP kinase p38-gamma {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38-gamma
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.7e-33  Score=218.94  Aligned_cols=174  Identities=24%  Similarity=0.382  Sum_probs=137.4

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     +++..++|.+++.  .....+.+.+|+++|++++|||||+++++|....  ........+++|||+ +.
T Consensus        31 fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~hpniv~l~~~~~~~~--~~~~~~~~~lv~e~~-~~  107 (346)
T d1cm8a_          31 YGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHENVIGLLDVFTPDE--TLDDFTDFYLVMPFM-GT  107 (346)
T ss_dssp             --CEEEEEETTTCCEEEEEECSSTTSSHHHHHHHHHHHHHHHHCCBTTBCCCSEEECSCS--STTTCCCCEEEEECC-SE
T ss_pred             CeEEEEEEECCCCCEEEEEEEchhhcChHHHHHHHHHHHHHHhcCCCCeeEEEEEeccCc--cccccceEEEEEecc-cc
Confidence            788998     2344556655542  3445678899999999999999999999874321  222345679999999 55


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccC
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~  128 (188)
                      ++..+       +..++.++ +|++.||+|||+++       |+||       +|++|||++.        ..||+.|  
T Consensus       108 ~l~~~~~~~~l~~~~~~~~~-~qi~~aL~~LH~~~IiHrDiKp~NIL~~~~~~~kl~Dfg~a~~~~~~~~~~~~t~~y--  184 (346)
T d1cm8a_         108 DLGKLMKHEKLGEDRIQFLV-YQMLKGLRYIHAAGIIHRDLKPGNLAVNEDCELKILDFGLARQADSEMTGYVVTRWY--  184 (346)
T ss_dssp             EHHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCSSCCSSCSCGGG--
T ss_pred             cHHHHHHhccccHHHHHHHH-HHHHHHHHHHHhCCCcccccCcchhhcccccccccccccceeccCCccccccccccc--
Confidence            66654       45677788 89999999999998       7777       5999999854        5688999  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +|||++.+...++.++||||+||++|+|++|++||.+.+..+.+..+....+.|+.
T Consensus       185 ~aPE~~~~~~~~~~~~DiwSlGvil~ell~g~~pf~~~~~~~~~~~~~~~~~~~~~  240 (346)
T d1cm8a_         185 RAPEVILNWMRYTQTVDIWSVGCIMAEMITGKTLFKGSDHLDQLKEIMKVTGTPPA  240 (346)
T ss_dssp             CCTHHHHTTTCCCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCH
T ss_pred             cCHHHHcCCCCCCccchhhcchHHHHHHHHCcCCCCCCChHHHHHHHHhccCCCcH
Confidence            99999987665799999999999999999999999999999998888887776654

>d1lufa_ d.144.1.7 (A:) Musk tyrosine kinase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Musk tyrosine kinase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=3e-32  Score=211.51  Aligned_cols=172  Identities=15%  Similarity=0.215  Sum_probs=136.5

Q ss_pred             cccccc-cCC-----cc-cccccccc----chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QSK-----WS-PNTPMARC----DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~~-----~~-~~~~i~~~----~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ ..+     .. ..+|+|+.    ..+..+++.+|+++|++++||||++++++|        .+....++++|+
T Consensus        26 fG~Vy~a~~~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~--------~~~~~~~~v~e~   97 (301)
T d1lufa_          26 FGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVKLLGVC--------AVGKPMCLLFEY   97 (301)
T ss_dssp             SCEEEEEEEETSSTTSSEEEEEEEECCTTCCHHHHHHHHHHHHHHHTCCCTTBCCEEEEE--------CSSSSCEEEEEC
T ss_pred             CeEEEEEEECCCccCCCCeEEEEEEEChhcChHHHHHHHHHHHHHHhcCCCCcccceeee--------ccCCceEEEEEe
Confidence            899997 211     11 14455542    334567799999999999999999999986        446789999999


Q ss_pred             cccccHHHHH--------------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-----
Q psy7174          74 FTKTTKARFY--------------------------------SHLRYLENQQILEGLQALKSSM-------PALL-----  109 (188)
Q Consensus        74 ~~~~~l~~~~--------------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-----  109 (188)
                      +.+|+|..+.                                ..+..++ .|++.||.|||+++       |+||     
T Consensus        98 ~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~i~-~qi~~gl~ylH~~~ivHrDlKp~NILld~~  176 (301)
T d1lufa_          98 MAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCAEQLCIA-RQVAAGMAYLSERKFVHRDLATRNCLVGEN  176 (301)
T ss_dssp             CTTCBHHHHHHHTCC----------------------CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECGG
T ss_pred             cCCCcHHHHHHhcCccccccccccccchhhhccccCCCCCCHHHHHHHH-HHHHHHhhhcccCCeEeeEEcccceEECCC
Confidence            9999998753                                1355566 89999999999987       6677     


Q ss_pred             --EEEecCCccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHH
Q psy7174         110 --KKFVGIGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLT  173 (188)
Q Consensus       110 --lkl~dfg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~  173 (188)
                        +||+|||+++             ..++..|  +|||.+.+.. |+.++|||||||++|||+++ .+||.+.++.+...
T Consensus       177 ~~~Kl~DFGls~~~~~~~~~~~~~~~~~~~~y--~aPE~~~~~~-~t~ksDVwS~Gvvl~ell~~~~~p~~~~~~~e~~~  253 (301)
T d1lufa_         177 MVVKIADFGLSRNIYSADYYKADGNDAIPIRW--MPPESIFYNR-YTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIY  253 (301)
T ss_dssp             GCEEECCCSCHHHHTGGGCBC----CCBCGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCTTTTSCHHHHHH
T ss_pred             CcEEEccchhheeccCCccccccCCCCcCcCc--CCHHHHccCC-CChhhhhccchhhHHHHHccCCCCCCCCCHHHHHH
Confidence              5999999853             3466789  9999998765 99999999999999999988 57899999998888


Q ss_pred             HHHhhcCCCCCCCCC
Q psy7174         174 RIFQTLGTPSEDTWP  188 (188)
Q Consensus       174 ~i~~~~~~p~~~~~p  188 (188)
                      .+......+.|+.+|
T Consensus       254 ~v~~~~~~~~p~~~~  268 (301)
T d1lufa_         254 YVRDGNILACPENCP  268 (301)
T ss_dssp             HHHTTCCCCCCTTCC
T ss_pred             HHHcCCCCCCCccch
Confidence            887776666665554

>d1fvra_ d.144.1.7 (A:) Tie2 kinase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Tie2 kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.98  E-value=9.6e-33  Score=215.11  Aligned_cols=172  Identities=15%  Similarity=0.136  Sum_probs=132.1

Q ss_pred             cccccc-cCCc------ccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-QSKW------SPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~~~~------~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ ..+-      +++|.+.+. ..+..+.+.+|+++|+++ +|||||+++++|        .++...++||||++
T Consensus        23 fg~Vy~~~~~~~~~~~~vaiK~~~~~~~~~~~~~~~~E~~~l~~l~~HpnIv~~~~~~--------~~~~~~~iV~ey~~   94 (309)
T d1fvra_          23 FGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLLGAC--------EHRGYLYLAIEYAP   94 (309)
T ss_dssp             GCEEEEEEEEETTEEEEEEEEEEECC------CHHHHHHHHHTTCCCCTTBCCEEEEE--------EETTEEEEEECCCT
T ss_pred             CcEEEEEEECCCCeEEEEEEEEECcccChHHHHHHHHHHHHHHhccCCCCEeeEEEEE--------ecCCeeEEEEEecC
Confidence            788988 2211      123333332 445667899999999998 799999999987        34668899999999


Q ss_pred             cccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCc
Q psy7174          76 KTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGI  117 (188)
Q Consensus        76 ~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~  117 (188)
                      +|+|..+.                        ..+..++ .||+.||.|||+.+       |+|+       +||+|||+
T Consensus        95 ~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qia~gl~~lH~~~iiHrDlkp~NIL~~~~~~~kl~DfG~  173 (309)
T d1fvra_          95 HGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFA-ADVARGMDYLSQKQFIHRDLAARNILVGENYVAKIADFGL  173 (309)
T ss_dssp             TCBHHHHHHTTCHHHHCHHHHHHTTBSCSSCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEECGGGCEEECCTTC
T ss_pred             CCcHHHHHhhccccccchhhhccccccCCCCHHHHHHHH-HHHHHHHHhhhcCCccccccccceEEEcCCCceEEccccc
Confidence            99998863                        2355566 89999999999988       7777       49999998


Q ss_pred             cc----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCC
Q psy7174         118 GR----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRIFQTLGTPSEDT  186 (188)
Q Consensus       118 ~~----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~p~~~~  186 (188)
                      +.          ..||..|  +|||.+.+.. |+.++|||||||++|||++| .+||.+.+..+....+.+..+.+.|..
T Consensus       174 a~~~~~~~~~~~~~gt~~y--~aPE~l~~~~-~~~~sDvwSfGvil~ell~~~~~p~~~~~~~~~~~~i~~~~~~~~~~~  250 (309)
T d1fvra_         174 SRGQEVYVKKTMGRLPVRW--MAIESLNYSV-YTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYRLEKPLN  250 (309)
T ss_dssp             EESSCEECCC----CCTTT--CCHHHHHHCE-ECHHHHHHHHHHHHHHHHTTSCCTTTTCCHHHHHHHGGGTCCCCCCTT
T ss_pred             cccccccccccceecCCcc--cchHHhccCC-CCccceeehhHHHHHHHHhcCCCCCCCCCHHHHHHHHHhcCCCCCCcc
Confidence            64          3578889  9999998766 99999999999999999986 578998888888888877666665554


Q ss_pred             CC
Q psy7174         187 WP  188 (188)
Q Consensus       187 ~p  188 (188)
                      +|
T Consensus       251 ~~  252 (309)
T d1fvra_         251 CD  252 (309)
T ss_dssp             BC
T ss_pred             CC
Confidence            43

>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase Erk2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2e-31  Score=210.50  Aligned_cols=172  Identities=28%  Similarity=0.431  Sum_probs=134.1

Q ss_pred             cccccc-----cCCcccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEecccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTT   78 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~   78 (188)
                      ||.||+     +++..++|.+.+. .....+++.+|+++|++++||||+++++++..    ........+++++++.+|+
T Consensus        21 fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~Ei~il~~l~hp~iv~~~~~~~~----~~~~~~~~~~l~~~~~~g~   96 (345)
T d1pmea_          21 YGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENIIGINDIIRA----PTIEQMKDVYLVTHLMGAD   96 (345)
T ss_dssp             CCCEEEEEETTTCSEEEEEEECCTTCHHHHHHHHHHHHHHHHCCCTTBCCCCEEECC----SSTTTCCCEEEEEECCCEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhcChHHHHHHHHHHHHHHHcCCCCCCcEEEEEee----ccccccceEEEEEeecCCc
Confidence            788998     2334445555443 23445678999999999999999999998632    1122334456667788999


Q ss_pred             HHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------------cccc
Q psy7174          79 KARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------------HVCT  123 (188)
Q Consensus        79 l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------------~~~~  123 (188)
                      |..+       +..++.++ +|++.||+|||+++       |+||       +||+|||++.              .+||
T Consensus        97 L~~~l~~~~l~~~~i~~i~-~qil~al~yLH~~~iiHRDIKp~NILl~~~~~~kl~DfG~a~~~~~~~~~~~~~~~~~gt  175 (345)
T d1pmea_          97 LYKLLKTQHLSNDHICYFL-YQILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVAT  175 (345)
T ss_dssp             HHHHHHHCCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCCGGGEEECTTCCEEECCCTTCEECCGGGCBCCTTCCCCSC
T ss_pred             hhhhhhcCCCCHHHHHHHH-HHHHHHHHHHHHCCCcCCCCCcceEEECCCCCEEEcccCceeeccCCCccceeecccccc
Confidence            9886       45677888 89999999999998       7777       4999999753              3478


Q ss_pred             ccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCC
Q psy7174         124 LYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPS  183 (188)
Q Consensus       124 ~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~  183 (188)
                      +.|  +|||++.....++.++||||+||++|+|++|++||.+.+..+....+......|.
T Consensus       176 ~~y--~aPE~l~~~~~~~~~~DiwSlG~il~eml~g~~pf~~~~~~~~~~~~~~~~~~~~  233 (345)
T d1pmea_         176 RWY--RAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIFPGKHYLDQLNHILGILGSPS  233 (345)
T ss_dssp             GGG--CCGGGTTTBCSCSTHHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCSCC
T ss_pred             cee--chHHHhhcCCCCCchhhhhccCceehHHhhCCCCCCCCCHHHHHHHHhhhccCCC
Confidence            899  9999986656689999999999999999999999999988888887777665554

>d2b1pa1 d.144.1.7 (A:46-400) c-jun N-terminal kinase (jnk3s) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-jun N-terminal kinase (jnk3s)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.7e-32  Score=215.45  Aligned_cols=177  Identities=25%  Similarity=0.396  Sum_probs=139.0

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+++.  .....+++.+|+.+|++++||||++++++|....  ...+....|++|||+.++
T Consensus        30 fg~V~~~~d~~t~~~vAvK~i~~~~~~~~~~~~~~~Ei~il~~l~hpnIv~~~~~f~~~~--~~~~~~~~~iv~Ey~~~~  107 (355)
T d2b1pa1          30 QGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLNVFTPQK--TLEEFQDVYLVMELMDAN  107 (355)
T ss_dssp             -CEEEEEEETTTTEEEEEEEEESTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSCC--STTTCCEEEEEEECCSEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEChhhcCHHHHHHHHHHHHHHHhcCCCCeeEEEEEEeccc--ccccCceeEEEEeccchH
Confidence            678888 2    334445555442  3445567899999999999999999999874321  112457889999999888


Q ss_pred             cHHHH-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------ccccccccC
Q psy7174          78 TKARF-----YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------~~~~~~y~~  128 (188)
                      ++..+     +..++.++ +|++.||.|||+++       |+|+       +|++|||++.          ..+|+.|  
T Consensus       108 l~~~~~~~~~~~~i~~~~-~qil~gl~~LH~~giiHrDlKP~Nil~~~~~~~kl~df~~~~~~~~~~~~~~~~~t~~y--  184 (355)
T d2b1pa1         108 LCQVIQMELDHERMSYLL-YQMLCGIKHLHSAGIIHRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYY--  184 (355)
T ss_dssp             HHHHHTSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECTTCCEEECCCCC---------------CCTT--
T ss_pred             HHHhhhcCCCHHHHHHHH-HHHHHHHHHhhhcccccccCCccccccccccceeeechhhhhccccccccccccccccc--
Confidence            77765     56788888 89999999999999       6666       5999999743          4678999  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      +|||++.+.. ++.++||||+||++++|++|++||.+.+......++....+.|+++.|
T Consensus       185 ~aPE~l~~~~-~~~~~DiwSlG~~l~ell~g~~pF~~~~~~~~~~~i~~~~~~~~~~~~  242 (355)
T d2b1pa1         185 RAPEVILGMG-YKENVDIWSVGCIMGEMVRHKILFPGRDYIDQWNKVIEQLGTPCPEFM  242 (355)
T ss_dssp             CCHHHHTTCC-CCTTHHHHHHHHHHHHHHHSSCSSCCSSHHHHHHHHHHHHCCCCHHHH
T ss_pred             cChhhhcCCC-CCCCcccccccchHHHHhhCCCCCCCCCHHHHHHHHHHhccCCCHHHH
Confidence            9999998865 999999999999999999999999999999999999888777766533

>d1p4oa_ d.144.1.7 (A:) Insulin-like growth factor 1 receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Insulin-like growth factor 1 receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.3e-31  Score=208.54  Aligned_cols=172  Identities=13%  Similarity=0.203  Sum_probs=137.3

Q ss_pred             cccccc-cC---------Ccccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEec
Q psy7174           5 CFKPFQ-QS---------KWSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKI   73 (188)
Q Consensus         5 ~g~v~~-~~---------~~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~   73 (188)
                      ||.||+ ..         ..+++|.+++. ..+....+.+|++++++++||||++++++|        ..+...++++||
T Consensus        33 fG~Vy~a~~~~~~~~~~~~~VAvK~~~~~~~~~~~~~~~~E~~il~~l~h~nIv~~~~~~--------~~~~~~~lv~e~  104 (308)
T d1p4oa_          33 FGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVVRLLGVV--------SQGQPTLVIMEL  104 (308)
T ss_dssp             SSEEEEEEEEEEETTEEEEEEEEEECCTTSCHHHHHHHHHHHHHGGGCCCTTBCCEEEEE--------CSSSSCEEEEEC
T ss_pred             CeEEEEEEECCcccCCCCcEEEEEEECcccChHHHHHHHHHHHHHHHcCCCCEeeeeeEE--------ecCCceeEEEee
Confidence            788987 21         12334444443 344456789999999999999999999986        446678999999


Q ss_pred             cccccHHHHH------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--
Q psy7174          74 FTKTTKARFY------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--  119 (188)
Q Consensus        74 ~~~~~l~~~~------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--  119 (188)
                      +.+|++..+.                  ..+..++ .|++.||.|||+++       |+|+       +||+|||+++  
T Consensus       105 ~~~g~l~~~~~~~~~~~~~~~~~~~~~~~~~~~i~-~~ia~gl~~LH~~~ivHrDlk~~NiLld~~~~~Kl~DFGla~~~  183 (308)
T d1p4oa_         105 MTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMA-GEIADGMAYLNANKFVHRDLAARNCMVAEDFTVKIGDFGMTRDI  183 (308)
T ss_dssp             CTTCBHHHHHHHHHHHHHHCTTCCCCCHHHHHHHH-HHHHHHHHHHHHTTCBCSCCSGGGEEECTTCCEEECCTTCCCGG
T ss_pred             cCCCCHHHHHHhcccccccccccCCCCHHHHHHHH-HHHHHHHHHHhhCCeeeceEcCCceeecCCceEEEeecccceec
Confidence            9999998862                  2245566 79999999999988       6666       5999999864  


Q ss_pred             -----------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         120 -----------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       120 -----------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                                 ..+|+.|  +|||.+.+.. ++.++|||||||++|||++| .+||.+.+..+.+..+.+....+.|..+
T Consensus       184 ~~~~~~~~~~~~~~t~~y--~aPe~l~~~~-~~~~~Dv~S~G~il~El~t~~~~p~~~~~~~~~~~~i~~~~~~~~p~~~  260 (308)
T d1p4oa_         184 YETDYYRKGGKGLLPVRW--MSPESLKDGV-FTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRFVMEGGLLDKPDNC  260 (308)
T ss_dssp             GGGGCEEGGGSSEECGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHHTSCCTTTTSCHHHHHHHHHTTCCCCCCTTC
T ss_pred             cCCcceeeccceeccccc--CCHHHHccCC-CCcccccccHHHHHHHHHhCCCCCCCCCCHHHHHHHHHhCCCCCCcccc
Confidence                       2467889  9999998866 89999999999999999997 6899999999999888887777666655


Q ss_pred             C
Q psy7174         188 P  188 (188)
Q Consensus       188 p  188 (188)
                      |
T Consensus       261 ~  261 (308)
T d1p4oa_         261 P  261 (308)
T ss_dssp             C
T ss_pred             h
Confidence            4

>d1r0pa_ d.144.1.7 (A:) Hepatocyte growth factor receptor, c-MET {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Hepatocyte growth factor receptor, c-MET
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.7e-32  Score=210.13  Aligned_cols=173  Identities=18%  Similarity=0.242  Sum_probs=126.5

Q ss_pred             cccccc-c---CC----cccccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccc
Q psy7174           5 CFKPFQ-Q---SK----WSPNTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFT   75 (188)
Q Consensus         5 ~g~v~~-~---~~----~~~~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~   75 (188)
                      ||.||+ .   +.    ..++|.+++. .....+++.+|+++|++++||||++++|++..       .+...+++||||.
T Consensus        40 fg~Vyk~~~~~~~~~~~~vAvK~~~~~~~~~~~~~~~~E~~~l~~l~HpnIv~~~g~~~~-------~~~~~~lv~E~~~  112 (311)
T d1r0pa_          40 FGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLLGICLR-------SEGSPLVVLPYMK  112 (311)
T ss_dssp             TEEEEEEEECC----CEEEEEEEECCCCCHHHHHHHHHHHHHHHTCCCTTBCCCCEEEEE-------TTTEEEEEEECCT
T ss_pred             CeEEEEEEEECCCCEEEEEEEEEECcccCHHHHHHHHHHHHHHHhCCCCCEeEEeEEEEe-------cCCceEEEEEEee
Confidence            788887 1   11    1234444443 45566889999999999999999999998632       2456899999999


Q ss_pred             cccHHHHH---------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------
Q psy7174          76 KTTKARFY---------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------  119 (188)
Q Consensus        76 ~~~l~~~~---------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------  119 (188)
                      +|++..+.         ..+..++ .|++.||.|||+.+       |+|+       +||+|||+++             
T Consensus       113 ~g~l~~~~~~~~~~~~~~~~~~i~-~qia~gL~~lH~~~iiHrDLK~~NILl~~~~~~kL~DFG~~~~~~~~~~~~~~~~  191 (311)
T d1r0pa_         113 HGDLRNFIRNETHNPTVKDLIGFG-LQVAKGMKFLASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNK  191 (311)
T ss_dssp             TCBHHHHHHCTTCCCBHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSSGGGCCTTTTTCCCTTCT
T ss_pred             cCchhhhhccccccchHHHHHHHH-HHHHHhhhhhcccCcccCCccHHhEeECCCCCEEEecccchhhccccccccceec
Confidence            99998862         3455566 79999999999988       6666       5999999854             


Q ss_pred             --ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCC-CCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         120 --HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFL-PGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf-~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                        ..||..|  +|||.+.... ++.++||||||+++|||++|..|| ...+..+....+.+..+.+.|..+|
T Consensus       192 ~~~~gt~~y--~aPE~~~~~~-~~~ksDI~SfGivl~El~t~~~p~~~~~~~~~~~~~i~~g~~~~~p~~~~  260 (311)
T d1r0pa_         192 TGAKLPVKW--MALESLQTQK-FTTKSDVWSFGVLLWELMTRGAPPYPDVNTFDITVYLLQGRRLLQPEYCP  260 (311)
T ss_dssp             TCSSCCGGG--SCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSCC------CHHHHHTTCCCCCCTTCC
T ss_pred             ccccccccc--cChHHHhcCC-CCChhHhhhhHHHHHHHHHCCCCCCCCCCHHHHHHHHHcCCCCCCcccCc
Confidence              2467789  9999998765 999999999999999999965555 4455555566666665555555443

>d1xwsa_ d.144.1.7 (A:) Proto-oncogene serine/threonine-protein kinase Pim-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Proto-oncogene serine/threonine-protein kinase Pim-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=3.6e-32  Score=208.41  Aligned_cols=151  Identities=13%  Similarity=0.140  Sum_probs=118.4

Q ss_pred             cccccc-----cCCccccccccccc------hhhhhHHHHHHHHHHhCC--CCCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARCD------VNVETQAKAEGKQDRRLD--YANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~~------~~~~~~~~~E~~il~~l~--h~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||+     +++..++|.+.+..      ....+++.+|+.+|++++  ||||++++++|        .++...+++|
T Consensus        17 fg~Vy~a~~~~~~~~vAvK~i~~~~~~~~~~~~~~~~~~~E~~il~~l~~~h~nIv~~~~~~--------~~~~~~~lv~   88 (273)
T d1xwsa_          17 FGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGVIRLLDWF--------ERPDSFVLIL   88 (273)
T ss_dssp             TEEEEEEEETTTCCEEEEEEEEGGGCCCEEECTTCCEEEHHHHHHHHHCSSSCSBCCEEEEE--------ECSSEEEEEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEehHHccchhhhhHHHHHHHHHHHHHHhccCCCCccEEEEEE--------eeCCeEEEEE
Confidence            788987     23334455554421      123345779999999997  89999999986        4567889999


Q ss_pred             ecccc-ccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc--------
Q psy7174          72 KIFTK-TTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR--------  119 (188)
Q Consensus        72 e~~~~-~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~--------  119 (188)
                      ||+.+ +++..+        +..++.++ .|++.||+|||+++       |+|+        +||+|||++.        
T Consensus        89 e~~~~~~~l~~~~~~~~~l~e~~~~~~~-~qi~~al~~lH~~~iiHrDiKp~NIll~~~~~~vkl~DFG~a~~~~~~~~~  167 (273)
T d1xwsa_          89 ERPEPVQDLFDFITERGALQEELARSFF-WQVLEAVRHCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTVYT  167 (273)
T ss_dssp             ECCSSEEEHHHHHHHHCSCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCSGGGEEEETTTTEEEECCCTTCEECCSSCBC
T ss_pred             EeccCcchHHHHHhccCCCCHHHHHHHH-HHHHHHHHHHHHCCCccccCcccceEEecCCCeEEECccccceeccccccc
Confidence            99975 566554        45677787 89999999999998       5565        5999999754        


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE  166 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~  166 (188)
                       ..||+.|  +|||++.+...++.++||||+||++|+|++|+.||.+.
T Consensus       168 ~~~GT~~y--~aPE~~~~~~~~~~~~DiwSlGvilyell~g~~Pf~~~  213 (273)
T d1xwsa_         168 DFDGTRVY--SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFEHD  213 (273)
T ss_dssp             CCCSCGGG--SCHHHHHHSCBCHHHHHHHHHHHHHHHHHHSSCSCCSH
T ss_pred             ccccCCCc--CCHHHHcCCCCCCcccccccceeeehhHhhCCCCCCCc
Confidence             5689999  99999987664578899999999999999999999753

>d1unla_ d.144.1.7 (A:) Cyclin-dependent PK, CDK5 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Cyclin-dependent PK, CDK5
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=4.4e-31  Score=203.54  Aligned_cols=173  Identities=32%  Similarity=0.488  Sum_probs=139.2

Q ss_pred             cccccc-----cCCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-----QSKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-----~~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+     ++++.++|.++..  .....+++.+|+.+|+.++||||++++++|        .+....+++++++.++
T Consensus        15 fg~V~~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~~E~~il~~l~h~niv~~~~~~--------~~~~~~~iv~~~~~~~   86 (292)
T d1unla_          15 YGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHDVL--------HSDKKLTLVFEFCDQD   86 (292)
T ss_dssp             SSEEEEEEETTTCCEEEEEEEESSCSSTTHHHHHHHHHHHHTTCCCTTBCCEEEEE--------ECSSEEEEEEECCSEE
T ss_pred             CeEEEEEEECCCCcEEEEEEEehhhCChHHHHHHHHHHHHHHhcCcCCEEeecccc--------ccccceeEEeeecccc
Confidence            788998     3344455555432  334567889999999999999999999986        4567789999999999


Q ss_pred             cHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-----------ccccc
Q psy7174          78 TKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-----------HVCTL  124 (188)
Q Consensus        78 ~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-----------~~~~~  124 (188)
                      ++..+        +..++.++ +|+++||+|||+++       |+||       +|++|||.+.           ..++.
T Consensus        87 ~l~~~~~~~~~~~~~~~~~~~-~q~~~aL~~lH~~~IvHrDiKP~NIli~~~~~~kl~DFG~a~~~~~~~~~~~~~~~~~  165 (292)
T d1unla_          87 LKKYFDSCNGDLDPEIVKSFL-FQLLKGLGFCHSRNVLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTL  165 (292)
T ss_dssp             HHHHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEECTTCCEEECCCTTCEECCSCCSCCCSCCSCG
T ss_pred             ccccccccccccchhHHHHHH-HHHHHHHHHhhcCCEeeecccCcccccccCCceeeeecchhhcccCCCccceeecccc
Confidence            98775        45677788 89999999999998       7777       4999999865           23456


Q ss_pred             cccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCC-CCCCChHHHHHHHHhhcCCCCCCCCC
Q psy7174         125 YCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPF-LPGESDLDQLTRIFQTLGTPSEDTWP  188 (188)
Q Consensus       125 ~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~p-f~~~~~~~~~~~i~~~~~~p~~~~~p  188 (188)
                      .|  .|||.+.....++.++||||+||++|||++|+.| |.+.+..+.+.++....+.|.+..||
T Consensus       166 ~~--~~pe~~~~~~~~~~~~DiwSlG~il~ell~g~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~  228 (292)
T d1unla_         166 WY--RPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPLFPGNDVDDQLKRIFRLLGTPTEEQWP  228 (292)
T ss_dssp             GG--CCHHHHTTCSCCCTHHHHHHHHHHHHHHTTTSCCSCCCSSHHHHHHHHHHHHCCCCTTTCT
T ss_pred             ch--hhhhHhccCCCCCchhhccccchHHHHHhhCCCCCCCCCCHHHHHHHHHhhcCCCChhhhh
Confidence            77  8999987766579999999999999999998876 56677778888888888888877765

>d1fgka_ d.144.1.7 (A:) Fibroblast growth factor receptor 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Fibroblast growth factor receptor 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.1e-31  Score=203.56  Aligned_cols=152  Identities=18%  Similarity=0.239  Sum_probs=125.2

Q ss_pred             chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------------------
Q psy7174          24 DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------------------   83 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------------------   83 (188)
                      ......++.+|...+.++ +|||||+++++|        .++...+++|||+.+|++..+.                   
T Consensus        58 ~~~~~~~~~~e~~~l~~~~~HpnIv~~~~~~--------~~~~~~~~v~e~~~~g~l~~~i~~~~~~~~~~~~~~~~~~~  129 (299)
T d1fgka_          58 TEKDLSDLISEMEMMKMIGKHKNIINLLGAC--------TQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPE  129 (299)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEECCCTTCBHHHHHHTTSCC------------C
T ss_pred             ChHHHHHHHHHHHHHHHhcCCCeEEeccccc--------ccCCeEEEEEEccCCCcHHHHHHhhcCCccccccccccCcc
Confidence            334557788999999888 799999999987        4467899999999999998753                   


Q ss_pred             -----HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccccccCCCC
Q psy7174          84 -----SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLYCTRGAP  131 (188)
Q Consensus        84 -----~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y~~~aP  131 (188)
                           ..+..++ .|++.||.|||+.+       |+|+       +||+|||++.             ..++..|  +||
T Consensus       130 ~~l~~~~~~~~~-~qi~~al~ylH~~~ivHrDiKp~NiLl~~~~~~kl~dfg~~~~~~~~~~~~~~~~~~~~~~y--~aP  206 (299)
T d1fgka_         130 EQLSSKDLVSCA-YQVARGMEYLASKKCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKW--MAP  206 (299)
T ss_dssp             CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEECTTCCEEECSTTCCCCGGGCCTTCCCTTSCCGGGG--SCH
T ss_pred             ccCCHHHHHHHH-HHHHHHHHHhhhCCEEeeeecccceeecCCCCeEeccchhhccccccccccccccCCCChhh--hhh
Confidence                 2355666 89999999999988       6776       4999999754             3467789  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHHhhcCCCCCCCC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIFQTLGTPSEDTW  187 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~~~~~~p~~~~~  187 (188)
                      |.+.+.. |+.++|||||||++|||++ |.+||.+.+..+....+......+.|..+
T Consensus       207 E~l~~~~-y~~k~DiwS~Gvvl~ell~~g~~p~~~~~~~~~~~~i~~~~~~~~p~~~  262 (299)
T d1fgka_         207 EALFDRI-YTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGHRMDKPSNC  262 (299)
T ss_dssp             HHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCHHHHHHHHHTTCCCCCCSSC
T ss_pred             hHhcCCC-CCchhhhHHhHHHHHHhccCCCCCCCCCCHHHHHHHHHcCCCCCCCccc
Confidence            9998765 9999999999999999997 79999988888877777766666555544

>d2gfsa1 d.144.1.7 (A:5-352) MAP kinase p38 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: MAP kinase p38
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.3e-31  Score=210.10  Aligned_cols=174  Identities=26%  Similarity=0.420  Sum_probs=135.3

Q ss_pred             cccccc-c----CCcccccccccc--chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccc
Q psy7174           5 CFKPFQ-Q----SKWSPNTPMARC--DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKT   77 (188)
Q Consensus         5 ~g~v~~-~----~~~~~~~~i~~~--~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~   77 (188)
                      ||.||+ .    ++..++|.+.+.  +....+++.+|+++|++++||||+++++++...   ...++...+++++++.+|
T Consensus        31 fg~Vy~a~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h~~iv~~~~~~~~~---~~~~~~~~~~i~~~~~gg  107 (348)
T d2gfsa1          31 YGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDVFTPA---RSLEEFNDVYLVTHLMGA  107 (348)
T ss_dssp             TSSEEEEEETTTTEEEEEEECSCTTSSHHHHHHHHHHHHHHHHCCCTTBCCCSEEECSC---SSTTTCCCCEEEEECCSE
T ss_pred             CeEEEEEEECCCCCEEEEEEECchhcChHHHHHHHHHHHHHHhcCCCCeeeEEEEEeec---cccccCceEEEEEeecCC
Confidence            778887 2    333445544432  344556789999999999999999999986321   223445567778889999


Q ss_pred             cHHHH-------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc--------ccccccccC
Q psy7174          78 TKARF-------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR--------HVCTLYCTR  128 (188)
Q Consensus        78 ~l~~~-------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~--------~~~~~~y~~  128 (188)
                      +|..+       +..++.++ +|++.||+|||+++       |+||       +|++|||++.        ..|+..|  
T Consensus       108 ~L~~~~~~~~l~e~~~~~i~-~qil~aL~~LH~~giiHrDiKp~NILi~~~~~~kl~dfg~a~~~~~~~~~~~g~~~y--  184 (348)
T d2gfsa1         108 DLNNIVKCQKLTDDHVQFLI-YQILRGLKYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWY--  184 (348)
T ss_dssp             EHHHHHTTCCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTCCEEECCC----CCTGGGSSSCHHHHT--
T ss_pred             chhhhcccccccHHHHHHHH-HHHHHHHHHHHhCCCcccccCCccccccccccccccccchhcccCcccccccccccc--
Confidence            99886       46688888 89999999999998       7777       4999999854        4577889  


Q ss_pred             CCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHHhhcCCCCC
Q psy7174         129 GAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIFQTLGTPSE  184 (188)
Q Consensus       129 ~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~~~~~~p~~  184 (188)
                      +|||...+...++.++||||+||++|+|++|++||.+.+.......|.+..+.+.+
T Consensus       185 ~apE~~~~~~~~~~~~DiwSlGv~l~~ll~g~~pF~~~~~~~~~~~i~~~~~~~~~  240 (348)
T d2gfsa1         185 RAPEIMLNWMHYNQTVDIWSVGCIMAELLTGRTLFPGTDHIDQLKLILRLVGTPGA  240 (348)
T ss_dssp             SCHHHHTTCSCCCTTHHHHHHHHHHHHHHHSSCSCCCSSHHHHHHHHHHHHCCCCH
T ss_pred             cCchhhcCCccCCcccchhhhhHHHHHHHhCCCCCCCCCHHHHHHHHHHhcCCCCh
Confidence            99999877665789999999999999999999999999999999998887766543

>d3bqca1 d.144.1.7 (A:3-330) Protein kinase CK2, alpha subunit {Rattus norvegicus [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Protein kinase CK2, alpha subunit
species: Rattus norvegicus [TaxId: 10116]

Probab=99.97  E-value=2.7e-31  Score=208.24  Aligned_cols=167  Identities=22%  Similarity=0.345  Sum_probs=130.8

Q ss_pred             cccccc-cCCccc-cccccccchhhhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARCDVNVETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~~~~~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ .++... .+|+|.......+++.+|+++|+.++ ||||++++++|..      ......+++|||+.++++..
T Consensus        48 fg~V~~a~~~~~~~~vAiK~i~~~~~~~~~~Ei~il~~l~~hpnIv~~~~~~~~------~~~~~~~~v~e~~~~~~L~~  121 (328)
T d3bqca1          48 YSEVFEAINITNNEKVVVKILKPVKKKKIKREIKILENLRGGPNIITLADIVKD------PVSRTPALVFEHVNNTDFKQ  121 (328)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSSCHHHHHHHHHHHHHHTTSTTBCCEEEEEEC------TTTCSEEEEEECCCSCBGGG
T ss_pred             CeEEEEEEECCCCCEEEEEEECHHHHHHHHHHHHHHHhccCCCCCcEEEEEEEe------cCCCceeEEEeecCCCcHHH
Confidence            788988 332222 44555443345678899999999996 9999999998622      34567899999999999887


Q ss_pred             H-----HHHHHHHHHHHHHHHHHHHhhcC-------CCCe--------EEEecCCccc----------ccccccccCCCC
Q psy7174          82 F-----YSHLRYLENQQILEGLQALKSSM-------PALL--------KKFVGIGIGR----------HVCTLYCTRGAP  131 (188)
Q Consensus        82 ~-----~~~~~~~~~~qi~~gl~~lH~~~-------~~~i--------lkl~dfg~~~----------~~~~~~y~~~aP  131 (188)
                      +     +..++.++ +||+.||+|||+++       |+||        +|++|||++.          ..+|+.|  +||
T Consensus       122 ~~~~l~e~~i~~i~-~qil~aL~~LH~~gIvHrDiKp~NILi~~~~~~vkl~DFG~a~~~~~~~~~~~~~~t~~y--~aP  198 (328)
T d3bqca1         122 LYQTLTDYDIRFYM-YEILKALDYCHSMGIMHRDVKPHNVMIDHEHRKLRLIDWGLAEFYHPGQEYNVRVASRYF--KGP  198 (328)
T ss_dssp             TTTSCCHHHHHHHH-HHHHHHHHHHHHTTEECCCCSGGGEEEETTTTEEEECCGGGCEECCTTCCCCSCCSCGGG--CCH
T ss_pred             HhcCCCHHHHHHHH-HHHHHHHHHHhhcccccccccccceEEcCCCCeeeecccccceeccCCCcccccccCccc--cCc
Confidence            5     56788888 89999999999998       6666        5999999864          3568889  999


Q ss_pred             ccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCC-ChHHHHHHHHhhcC
Q psy7174         132 ELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGE-SDLDQLTRIFQTLG  180 (188)
Q Consensus       132 e~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~-~~~~~~~~i~~~~~  180 (188)
                      |.+.+...++.++||||+||++|++++|+.||... +..++...+...++
T Consensus       199 E~~~~~~~~~~~~DiwslG~~l~e~~~g~~pf~~~~~~~~~~~~i~~~~g  248 (328)
T d3bqca1         199 ELLVDYQMYDYSLDMWSLGCMLASMIFRKEPFFHGHDNYDQLVRIAKVLG  248 (328)
T ss_dssp             HHHTTCCCCCTHHHHHHHHHHHHHHHHTCSSSSCCSSHHHHHHHHHHHHC
T ss_pred             ccccCCCCCCcccchhhhhhhhHHhccCCCCCCCCchhHHHHHHHHHHHC
Confidence            99887666899999999999999999999998654 44555555655444

>d1t46a_ d.144.1.7 (A:) c-KIT receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: c-KIT receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=7.4e-31  Score=204.51  Aligned_cols=153  Identities=19%  Similarity=0.259  Sum_probs=123.0

Q ss_pred             chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH-------------------
Q psy7174          24 DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY-------------------   83 (188)
Q Consensus        24 ~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~-------------------   83 (188)
                      .......+.+|+.+++++ +|||||+++++|        .++...+++||||++|++..+.                   
T Consensus        66 ~~~~~~~~~~E~~~~~~l~~HpnIv~~~g~~--------~~~~~~~lvmE~~~~g~l~~~l~~~~~~~~~~~~~~~~~~~  137 (311)
T d1t46a_          66 HLTEREALMSELKVLSYLGNHMNIVNLLGAC--------TIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMED  137 (311)
T ss_dssp             CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEE--------CSSSSCEEEEECCTTEEHHHHHHHTTTTC------------
T ss_pred             CHHHHHHHHHHHHHHHhccCCCCEEEEEEEE--------eeCCEEEEEEEcCCCCCHHHHHHhccccccccccccccccc
Confidence            344556789999999999 699999999986        4566789999999999988752                   


Q ss_pred             -------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc-------------ccccccccCC
Q psy7174          84 -------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR-------------HVCTLYCTRG  129 (188)
Q Consensus        84 -------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~-------------~~~~~~y~~~  129 (188)
                             ..+..++ .|++.||+|||+++       |+|+       +|++|||++.             ..||+.|  +
T Consensus       138 ~~~~l~~~~~~~~~-~qi~~gl~~LH~~~ivHrDLKp~NIl~~~~~~~ki~DfG~~~~~~~~~~~~~~~~~~gt~~y--~  214 (311)
T d1t46a_         138 DELALDLEDLLSFS-YQVAKGMAFLASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDSNYVVKGNARLPVKW--M  214 (311)
T ss_dssp             --CCCCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCSGGGEEEETTTEEEECCCGGGSCTTSCTTSEECSSSEECGGG--C
T ss_pred             cccCCCHHHHHHHH-HHHHHHHHHHHhCCeeecccccccccccccCcccccccchheeccCCCcceEeeecccChHH--c
Confidence                   3455666 89999999999998       6666       4999999754             3567889  9


Q ss_pred             CCccccccCCCCchhHHHHHHHHHHHHHh-CCCCCCCCChHHHHHHHH-hhcCCCCCCCCC
Q psy7174         130 APELLFGARMYGVGIDMWAVGCIICELLL-KAPFLPGESDLDQLTRIF-QTLGTPSEDTWP  188 (188)
Q Consensus       130 aPe~~~~~~~~~~~~DiwslG~il~el~~-g~~pf~~~~~~~~~~~i~-~~~~~p~~~~~p  188 (188)
                      |||.+.+.. ++.++|||||||++|||++ |.+||.+.+..+.+.++. +....+.|..||
T Consensus       215 aPE~~~~~~-~~~~~DIwS~G~~l~ellt~g~p~~~~~~~~~~~~~~i~~~~~~~~~~~~~  274 (311)
T d1t46a_         215 APESIFNCV-YTFESDVWSYGIFLWELFSLGSSPYPGMPVDSKFYKMIKEGFRMLSPEHAP  274 (311)
T ss_dssp             CHHHHHHCC-CCHHHHHHHHHHHHHHHHTTTCCSSTTCCSSHHHHHHHHHTCCCCCCTTSC
T ss_pred             CHHHhcCCC-CCCcccccchHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCCCCCCccccc
Confidence            999998755 9999999999999999998 788888877766666554 445555555554

>d1ywna1 d.144.1.7 (A:818-1166) Vascular endothelial growth factor receptor 2 (kdr) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Vascular endothelial growth factor receptor 2 (kdr)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=1.4e-30  Score=201.76  Aligned_cols=172  Identities=17%  Similarity=0.199  Sum_probs=122.5

Q ss_pred             cccccc-c----C-----Ccccccccccc-chhhhhHHHHHHHHHHhC-CCCCeeEEeeecccccCCCCCCCCccEEEEe
Q psy7174           5 CFKPFQ-Q----S-----KWSPNTPMARC-DVNVETQAKAEGKQDRRL-DYANIIQYLSLPVETLQPTTLSTSSDYIVVK   72 (188)
Q Consensus         5 ~g~v~~-~----~-----~~~~~~~i~~~-~~~~~~~~~~E~~il~~l-~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e   72 (188)
                      ||.||+ .    +     +..++|.+++. .....+.+.+|..++.++ +|+||+++++++.       ..+...+++||
T Consensus        26 fG~Vy~a~~~~~~~~~~~~~vAvK~l~~~~~~~~~~~~~~e~~~l~~~~~h~~iv~~~~~~~-------~~~~~~~iv~E   98 (299)
T d1ywna1          26 FGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVVNLLGACT-------KPGGPLMVIVE   98 (299)
T ss_dssp             SCEEEEEEEESTTSSSCEEEEEEEEC----CHHHHHHHHHHHHHHHHHCCCTTBCCEEEEEC-------STTSCCEEEEE
T ss_pred             CeEEEEEEEcCCCcccCCeEEEEEEEccccCcHHHHHHHHHHHHHHhhcCCCeEEEeeeeec-------cCCCeEEEEEE
Confidence            788887 1    1     12234444332 344556778888888776 5899999999752       23456899999


Q ss_pred             ccccccHHHHH------------------------HHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEec
Q psy7174          73 IFTKTTKARFY------------------------SHLRYLENQQILEGLQALKSSM-------PALL-------KKFVG  114 (188)
Q Consensus        73 ~~~~~~l~~~~------------------------~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~d  114 (188)
                      ||.+|+|..+.                        ..+..++ .|++.||.|||+++       |+||       +||+|
T Consensus        99 ~~~~g~L~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~qi~~gl~ylH~~~ivHrDlKp~NILl~~~~~~Kl~D  177 (299)
T d1ywna1          99 FCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS-FQVAKGMEFLASRKCIHRDLAARNILLSEKNVVKICD  177 (299)
T ss_dssp             CCTTCBHHHHHHHTGGGBCC-----------CBCHHHHHHHH-HHHHHHHHHHHHTTCCCSCCCGGGEEECGGGCEEECC
T ss_pred             ecCCCcHHHHHHhccccccccccchhhhhcccCCHHHHHHHH-HHHHHHHHHHHhCCCcCCcCCccceeECCCCcEEEcc
Confidence            99999998863                        2355666 79999999999998       7777       59999


Q ss_pred             CCccc-------------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhC-CCCCCCCChHHHHHHH-Hhhc
Q psy7174         115 IGIGR-------------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLK-APFLPGESDLDQLTRI-FQTL  179 (188)
Q Consensus       115 fg~~~-------------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g-~~pf~~~~~~~~~~~i-~~~~  179 (188)
                      ||+++             ..||..|  +|||++.+.. ++.++||||+||++|||+++ .+||.+.+..+.+..+ .+..
T Consensus       178 FGla~~~~~~~~~~~~~~~~gt~~y--~APE~l~~~~-~~~~sDiwS~Gvil~ellt~~~~p~~~~~~~~~~~~~~~~~~  254 (299)
T d1ywna1         178 FGLARDIYKDPDYVRKGDARLPLKW--MAPETIFDRV-YTIQSDVWSFGVLLWEIFSLGASPYPGVKIDEEFCRRLKEGT  254 (299)
T ss_dssp             ------CCSCTTSCCTTSCCCGGGG--CCHHHHHHCC-CCHHHHHHHHHHHHHHHHTTSCCSSTTCCCSHHHHHHHHHTC
T ss_pred             CcchhhccccccccccCceeeCccc--cchhHhhcCC-CCcccceeehHHHHHHHHhCCCCCCCCCCHHHHHHHHHhcCC
Confidence            99853             3578889  9999998865 99999999999999999986 6789876655544444 4444


Q ss_pred             CCCCCCCC
Q psy7174         180 GTPSEDTW  187 (188)
Q Consensus       180 ~~p~~~~~  187 (188)
                      ..+.|+.+
T Consensus       255 ~~~~~~~~  262 (299)
T d1ywna1         255 RMRAPDYT  262 (299)
T ss_dssp             CCCCCTTC
T ss_pred             CCCCCccC
Confidence            45444444

>d1vzoa_ d.144.1.7 (A:) Ribosomal protein S6 kinase alpha 5, Msk1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Ribosomal protein S6 kinase alpha 5, Msk1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.8e-30  Score=203.23  Aligned_cols=161  Identities=12%  Similarity=0.159  Sum_probs=123.4

Q ss_pred             cccccc----cCC----cccccccccc----chhhhhHHHHHHHHHHhCCC-CCeeEEeeecccccCCCCCCCCccEEEE
Q psy7174           5 CFKPFQ----QSK----WSPNTPMARC----DVNVETQAKAEGKQDRRLDY-ANIIQYLSLPVETLQPTTLSTSSDYIVV   71 (188)
Q Consensus         5 ~g~v~~----~~~----~~~~~~i~~~----~~~~~~~~~~E~~il~~l~h-~niv~~~~~~~~~~~~~~~~~~~~~iv~   71 (188)
                      ||.||+    .++    ..++|.+++.    .....+.+.+|++++++++| |||+++++++        .+....++++
T Consensus        37 fg~Vy~~~~~~~~~~g~~vAvK~i~~~~~~~~~~~~~~~~~E~~il~~l~h~pnIv~~~~~~--------~~~~~~~~v~  108 (322)
T d1vzoa_          37 YGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFLVTLHYAF--------QTETKLHLIL  108 (322)
T ss_dssp             TEEEEEEEECSSTTTTCEEEEEEESEEEEEEEESSGGGCCCHHHHHHHHHTCTTBCCEEEEE--------EETTEEEEEE
T ss_pred             CeEEEEEEECccCCCCcEEEEEEEehHHhccchHHHHHHHHHHHHHHhccCCCeEEEeeeee--------ccCCceeeee
Confidence            788887    122    2345554442    22345678899999999976 8999999975        4467889999


Q ss_pred             eccccccHHHH--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe-------EEEecCCccc----------
Q psy7174          72 KIFTKTTKARF--------YSHLRYLENQQILEGLQALKSSM-------PALL-------KKFVGIGIGR----------  119 (188)
Q Consensus        72 e~~~~~~l~~~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i-------lkl~dfg~~~----------  119 (188)
                      ||+.+|+|..+        +..+..++ +|++.||+|||+++       |+|+       +||+|||++.          
T Consensus       109 e~~~~~~L~~~i~~~~~~~e~~~~~~~-~Qi~~al~~lH~~~ivHrDiKp~Nill~~~~~vkL~DFG~a~~~~~~~~~~~  187 (322)
T d1vzoa_         109 DYINGGELFTHLSQRERFTEHEVQIYV-GEIVLALEHLHKLGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERA  187 (322)
T ss_dssp             CCCCSCBHHHHHHHHSCCCHHHHHHHH-HHHHHHHHHHHHTTCCCCCCCGGGEEECTTSCEEESCSSEEEECCGGGGGGG
T ss_pred             ecccccHHHHHHHhcccccHHHHHHHH-HHHHHHHHHhhcCCEEeccCCccceeecCCCCEEEeeccchhhhcccccccc
Confidence            99999999875        35567777 89999999999998       6666       5999999754          


Q ss_pred             --ccccccccCCCCccccccC-CCCchhHHHHHHHHHHHHHhCCCCCCCCChHHHHHHHH
Q psy7174         120 --HVCTLYCTRGAPELLFGAR-MYGVGIDMWAVGCIICELLLKAPFLPGESDLDQLTRIF  176 (188)
Q Consensus       120 --~~~~~~y~~~aPe~~~~~~-~~~~~~DiwslG~il~el~~g~~pf~~~~~~~~~~~i~  176 (188)
                        ..|++.|  +|||.+.+.. .++.++||||+||++|+|++|+.||.+.+..+....+.
T Consensus       188 ~~~~g~~~~--~~pe~~~~~~~~~~~ksDIWSlG~iLyelltG~~PF~~~~~~~~~~~i~  245 (322)
T d1vzoa_         188 YDFCGTIEY--MAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFTVDGEKNSQAEIS  245 (322)
T ss_dssp             CGGGSCCTT--CCHHHHTTCC---CTHHHHHHHHHHHHHHHHSSCTTSCTTSCCCHHHHH
T ss_pred             ccccccccc--chhHHhhcCCcCCCchhhhHHHHHHHHHHHhCCCCCCCCCHHHHHHHHH
Confidence              4567888  9999987543 36889999999999999999999998765544444443

>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.95  E-value=1.3e-28  Score=190.48  Aligned_cols=153  Identities=11%  Similarity=0.083  Sum_probs=115.6

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKAR   81 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~   81 (188)
                      ||.||+ ..+... .+|+|.. .....+++.+|+++++.++|+|++..+..+.       .++...+++||++.++....
T Consensus        20 fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~E~~i~~~l~~~~~i~~~~~~~-------~~~~~~~ivme~~~~~l~~~   92 (299)
T d1ckia_          20 FGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYKMMQGGVGIPTIRWCG-------AEGDYNVMVMELLGPSLEDL   92 (299)
T ss_dssp             SSEEEEEEETTTTEEEEEEEEESCTTSCCHHHHHHHHHHSTTSTTCCCEEEEE-------EETTEEEEEEECCCCBHHHH
T ss_pred             CcEEEEEEECCCCCEEEEEEEchhccCHHHHHHHHHHHHccCCCcccEEEEEE-------ecCCEEEEEEEEcCCchhhh
Confidence            889998 322222 4444432 2234467899999999999877666655431       34567789999996665544


Q ss_pred             H--------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe----------EEEecCCccc-----------------
Q psy7174          82 F--------YSHLRYLENQQILEGLQALKSSM-------PALL----------KKFVGIGIGR-----------------  119 (188)
Q Consensus        82 ~--------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i----------lkl~dfg~~~-----------------  119 (188)
                      .        ...+..++ .|++.||+|||+++       |+||          +|++|||+++                 
T Consensus        93 ~~~~~~~~~~~~~~~~~-~qi~~~l~~lH~~~iiHrDiKp~NIl~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~~~~~  171 (299)
T d1ckia_          93 FNFCSRKFSLKTVLLLA-DQMISRIEYIHSKNFIHRDVKPDNFLMGLGKKGNLVYIIDFGLAKKYRDARTHQHIPYRENK  171 (299)
T ss_dssp             HHHTTTCCCHHHHHHHH-HHHHHHHHHHHHTTEECSCCCGGGEEECCGGGTTCEEECCCSSCEECBCTTTCCBCCCCBCC
T ss_pred             hhhccCCCcHHHHHHHH-HHHHHHHHHHHHCCeeeccCCHhhccccccCCCceeeeeccCcceeccccccccceeccccC
Confidence            3        34566677 89999999999998       7776          6999999854                 


Q ss_pred             -ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCCh
Q psy7174         120 -HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGESD  168 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~~  168 (188)
                       ..||+.|  +|||.+.+.. ++.++|||||||++|||++|++||.+.+.
T Consensus       172 ~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlG~~l~el~tg~~P~~~~~~  218 (299)
T d1ckia_         172 NLTGTARY--ASINTHLGIE-QSRRDDLESLGYVLMYFNLGSLPWQGLKA  218 (299)
T ss_dssp             SCCCCSSS--CCHHHHTTBC-CCHHHHHHHHHHHHHHHHHSSCTTCCCC-
T ss_pred             CcCCCccc--cCHHHHhCCC-CCChhhEEecCHHHHHHHhCCCcccccch
Confidence             3588999  9999998866 99999999999999999999999977544

>d1vjya_ d.144.1.7 (A:) Type I TGF-beta receptor R4 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Type I TGF-beta receptor R4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.95  E-value=1.6e-28  Score=190.56  Aligned_cols=153  Identities=14%  Similarity=0.098  Sum_probs=110.7

Q ss_pred             cccccccCCccccccccccchhhhhHHHHHHHH--HHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH
Q psy7174           5 CFKPFQQSKWSPNTPMARCDVNVETQAKAEGKQ--DRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF   82 (188)
Q Consensus         5 ~g~v~~~~~~~~~~~i~~~~~~~~~~~~~E~~i--l~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~   82 (188)
                      ||.||+.......+|+|....+..++..+|.++  +++++||||+++++++...    .......+++|||+.+|+|..+
T Consensus        16 fg~Vy~~~~~g~~vAvK~~~~~~~~~~~~e~ei~~~~~~~HpnIv~~~~~~~~~----~~~~~~~~lv~Ey~~~g~L~~~   91 (303)
T d1vjya_          16 FGEVWRGKWRGEEVAVKIFSSREERSWFREAEIYQTVMLRHENILGFIAADNKD----NGTWTQLWLVSDYHEHGSLFDY   91 (303)
T ss_dssp             SSEEEEEEETTEEEEEEEECGGGHHHHHHHHHHHTSTTCCCTTBCCEEEEEEEE----CSSSEEEEEEEECCTTCBHHHH
T ss_pred             CeEEEEEEECCEEEEEEEECccchhHHHHHHHHHHHhhCCCCcCcceEEEEEeC----CCcceEEEEEEecccCCCHHHH
Confidence            788888211111445555434444555555554  4578999999999997542    1223357999999999999887


Q ss_pred             H-------HHHHHHHHHHHHHHHHHHhhc--------C-------CCCe-------EEEecCCccc--------------
Q psy7174          83 Y-------SHLRYLENQQILEGLQALKSS--------M-------PALL-------KKFVGIGIGR--------------  119 (188)
Q Consensus        83 ~-------~~~~~~~~~qi~~gl~~lH~~--------~-------~~~i-------lkl~dfg~~~--------------  119 (188)
                      .       ..+..+. .|++.||.|||+.        +       |+||       +||+|||+++              
T Consensus        92 l~~~~l~~~~~~~~~-~~ia~gl~~lH~~~~~~~~~~~IvHrDlKp~NILl~~~~~~Kl~DFGl~~~~~~~~~~~~~~~~  170 (303)
T d1vjya_          92 LNRYTVTVEGMIKLA-LSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPN  170 (303)
T ss_dssp             HHHCCBCHHHHHHHH-HHHHHHHHHHHCCBCSTTCBCEEECSCCCGGGEEECTTSCEEECCCTTCEEEETTTTEECC---
T ss_pred             HhcCCCCHHHHHHHH-HHHHHHHHHHHHhhhhhccCCCeeccccCccceEEcCCCCeEEEecCccccccCCCcceecccc
Confidence            3       3344566 7999999999973        2       6666       5999999743              


Q ss_pred             -ccccccccCCCCccccccC-----CCCchhHHHHHHHHHHHHHhCCCCCC
Q psy7174         120 -HVCTLYCTRGAPELLFGAR-----MYGVGIDMWAVGCIICELLLKAPFLP  164 (188)
Q Consensus       120 -~~~~~~y~~~aPe~~~~~~-----~~~~~~DiwslG~il~el~~g~~pf~  164 (188)
                       ..||+.|  +|||++.+..     .++.++|||||||++|||++|.+|+.
T Consensus       171 ~~~gt~~y--~aPE~~~~~~~~~~~~~~~k~Di~S~Gvvl~el~tg~~~~~  219 (303)
T d1vjya_         171 HRVGTKRY--MAPEVLDDSINMKHFESFKRADIYAMGLVFWEIARRCSIGG  219 (303)
T ss_dssp             -CCSCGGG--CCHHHHTTCSCTTCHHHHHHHHHHHHHHHHHHHHHTBCBTT
T ss_pred             ceecccCc--CChhhccccccccCCCcCcchhhhhhHHHHHHHhhCCCCCC
Confidence             4578999  9999986532     15678999999999999999988763

>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Casein kinase-1, CK1
species: Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]

Probab=99.95  E-value=5.6e-28  Score=186.65  Aligned_cols=150  Identities=13%  Similarity=0.084  Sum_probs=116.5

Q ss_pred             cccccc-cCCccc-ccccccc-chhhhhHHHHHHHHHHhCCC-CCeeEEeeecccccCCCCCCCCccEEEEeccccccHH
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC-DVNVETQAKAEGKQDRRLDY-ANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKA   80 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~-~~~~~~~~~~E~~il~~l~h-~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~   80 (188)
                      ||.||+ .++... .+|+|.. .....+.+.+|+++++.++| +|++.+++++        ..+...+++|||+ ++++.
T Consensus        18 fG~Vy~a~~~~~~~~vAvK~~~~~~~~~~~~~e~~~~~~l~~~~~i~~~~~~~--------~~~~~~~~vme~~-~~~l~   88 (293)
T d1csna_          18 FGVIFEGTNLLNNQQVAIKFEPRRSDAPQLRDEYRTYKLLAGCTGIPNVYYFG--------QEGLHNVLVIDLL-GPSLE   88 (293)
T ss_dssp             SCEEEEEEETTTTEEEEEEEEECCTTSCCHHHHHHHHHHTTTCTTCCCEEEEE--------EETTEEEEEEECC-CCBHH
T ss_pred             CeEEEEEEECCCCCEEEEEEEccccCcHHHHHHHHHHHHhcCCCCCCEEEEEe--------ecCCccEEEEEec-CCCHH
Confidence            788998 322222 4444432 22345678899999999985 8999999875        4466789999998 56666


Q ss_pred             HH---------HHHHHHHHHHHHHHHHHHHhhcC-------CCCe------------EEEecCCccc-------------
Q psy7174          81 RF---------YSHLRYLENQQILEGLQALKSSM-------PALL------------KKFVGIGIGR-------------  119 (188)
Q Consensus        81 ~~---------~~~~~~~~~~qi~~gl~~lH~~~-------~~~i------------lkl~dfg~~~-------------  119 (188)
                      .+         ...+..++ .|++.||.|||+.+       |+|+            +|++|||++.             
T Consensus        89 ~~~~~~~~~~~~~~~~~i~-~q~~~~l~~lH~~giiHrDiKp~Nili~~~~~~~~~~vkl~DFG~a~~~~~~~~~~~~~~  167 (293)
T d1csna_          89 DLLDLCGRKFSVKTVAMAA-KQMLARVQSIHEKSLVYRDIKPDNFLIGRPNSKNANMIYVVDFGMVKFYRDPVTKQHIPY  167 (293)
T ss_dssp             HHHHHTTTCCCHHHHHHHH-HHHHHHHHHHHTTTEECCCCCGGGEEECCSSSTTTTCEEECCCTTCEESBCTTTCCBCCC
T ss_pred             HHHHhhccchhhHHHHHHH-HHHHHHHHHHHHCCceeccCCccceeecCcccccCCceEEcccceeEEcccCccccceee
Confidence            54         34456677 89999999999998       5555            5899999853             


Q ss_pred             -----ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC
Q psy7174         120 -----HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES  167 (188)
Q Consensus       120 -----~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~  167 (188)
                           ..||+.|  +|||++.+.. ++.++|+||+||++|||++|+.||.+..
T Consensus       168 ~~~~~~~GT~~y--~aPE~~~~~~-~~~~~DiwSlG~~l~elltg~~Pf~~~~  217 (293)
T d1csna_         168 REKKNLSGTARY--MSINTHLGRE-QSRRDDLEALGHVFMYFLRGSLPWQGLK  217 (293)
T ss_dssp             CCCCCCCSCTTT--CCHHHHTTCC-CCHHHHHHHHHHHHHHHHHSSCTTSSCC
T ss_pred             cccCceEEchhh--cCHHHhcCCC-CChHHHHHHhhHHHHHHHhCCCcCCCcc
Confidence                 3589999  9999998865 9999999999999999999999997643

>d1q8ya_ d.144.1.7 (A:) Sky1p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: Protein kinases, catalytic subunit
domain: Sky1p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=1.1e-23  Score=166.21  Aligned_cols=169  Identities=21%  Similarity=0.305  Sum_probs=116.2

Q ss_pred             cccccc-cCCccc-ccccccc--chhhhhHHHHHHHHHHhCC-----------CCCeeEEeeecccccCCCCCCCCccEE
Q psy7174           5 CFKPFQ-QSKWSP-NTPMARC--DVNVETQAKAEGKQDRRLD-----------YANIIQYLSLPVETLQPTTLSTSSDYI   69 (188)
Q Consensus         5 ~g~v~~-~~~~~~-~~~i~~~--~~~~~~~~~~E~~il~~l~-----------h~niv~~~~~~~~~~~~~~~~~~~~~i   69 (188)
                      ||.||+ .++... .+|+|..  .....+.+.+|+++++.++           |+||+++++++.+      ......+.
T Consensus        26 fg~Vy~~~~~~~g~~vAvKvi~~~~~~~~~~~~Ei~~l~~l~~~~~~~~~~~~~~~iv~~~~~~~~------~~~~~~~~   99 (362)
T d1q8ya_          26 FSTVWLAKDMVNNTHVAMKIVRGDKVYTEAAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNH------KGPNGVHV   99 (362)
T ss_dssp             SEEEEEEEETTTTEEEEEEEECSCHHHHHHHHHHHHHHHHHHHTCCSHHHHHHHTTBCCCCEEEEE------EETTEEEE
T ss_pred             CeEEEEEEECCCCCEEEEEEEeccccchHHHHHHHHHHHHhcchhhhhhhhcCcCceEEEEEEeee------ccccceee
Confidence            778887 222222 3444432  2223466788999988876           4789999887532      23344566


Q ss_pred             EEeccccccHHH-H----------HHHHHHHHHHHHHHHHHHHhh-cC-------CCCe-------------EEEecCCc
Q psy7174          70 VVKIFTKTTKAR-F----------YSHLRYLENQQILEGLQALKS-SM-------PALL-------------KKFVGIGI  117 (188)
Q Consensus        70 v~e~~~~~~l~~-~----------~~~~~~~~~~qi~~gl~~lH~-~~-------~~~i-------------lkl~dfg~  117 (188)
                      +++++..+.... .          +..++.++ +|++.||+|||+ .+       |+||             +|++|||.
T Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~-~qil~al~~lh~~~~IvHrDlKp~NIll~~~~~~~~~~~~kl~dfg~  178 (362)
T d1q8ya_         100 VMVFEVLGENLLALIKKYEHRGIPLIYVKQIS-KQLLLGLDYMHRRCGIIHTDIKPENVLMEIVDSPENLIQIKIADLGN  178 (362)
T ss_dssp             EEEECCCCEEHHHHHHHTTTSCCCHHHHHHHH-HHHHHHHHHHHHTTCEECSCCSGGGEEEEEEETTTTEEEEEECCCTT
T ss_pred             eeeecccccccccccccccccCCcHHHHHHHH-HHHHHHHHHHhhhcCcccccCChhHeeeeccCcccccceeeEeeccc
Confidence            666665443222 1          45677788 899999999998 65       7776             48999997


Q ss_pred             cc--------ccccccccCCCCccccccCCCCchhHHHHHHHHHHHHHhCCCCCCCCC------hHHHHHHHHhhcCCCC
Q psy7174         118 GR--------HVCTLYCTRGAPELLFGARMYGVGIDMWAVGCIICELLLKAPFLPGES------DLDQLTRIFQTLGTPS  183 (188)
Q Consensus       118 ~~--------~~~~~~y~~~aPe~~~~~~~~~~~~DiwslG~il~el~~g~~pf~~~~------~~~~~~~i~~~~~~p~  183 (188)
                      +.        ..||+.|  +|||++.... |+.++|+||+||++++|++|+.||...+      ..+.+..+...++.++
T Consensus       179 s~~~~~~~~~~~gt~~y--~aPE~~~~~~-~~~~~DiwSlG~il~el~~g~~pF~~~~~~~~~~~~~~~~~~~~~lg~~~  255 (362)
T d1q8ya_         179 ACWYDEHYTNSIQTREY--RSPEVLLGAP-WGCGADIWSTACLIFELITGDFLFEPDEGHSYTKDDDHIAQIIELLGELP  255 (362)
T ss_dssp             CEETTBCCCSCCSCGGG--CCHHHHHTCC-CCTHHHHHHHHHHHHHHHHSSCCC---------CHHHHHHHHHHHHCSCC
T ss_pred             ccccccccccccccccc--cChhhccccC-CCccccccchHHHHHHHHHCCCCCCCCccccccchhHHHHHHHHHhCCCC
Confidence            54        5678899  9999998765 9999999999999999999999997543      3344555556665543

>d1zara2 d.144.1.9 (A:91-281) Rio2 serine protein kinase C-terminal domain {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: RIO1-like kinases
domain: Rio2 serine protein kinase C-terminal domain
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=99.28  E-value=7.7e-13  Score=94.72  Aligned_cols=105  Identities=13%  Similarity=0.080  Sum_probs=75.8

Q ss_pred             HHHHHHHHHHhCCCCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHH-HHHHHHHHHHHHHHHHHHHhhcC---
Q psy7174          30 QAKAEGKQDRRLDYANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARF-YSHLRYLENQQILEGLQALKSSM---  105 (188)
Q Consensus        30 ~~~~E~~il~~l~h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~-~~~~~~~~~~qi~~gl~~lH~~~---  105 (188)
                      .+.+|.+.+.++.|++++..+++            ...+++||++.++....+ ......++ .|++.|+.|||+++   
T Consensus        60 ~~~~e~~~l~~l~~~~v~~~~~~------------~~~~lvme~~~~~~~~~l~~~~~~~i~-~ql~~~l~~lH~~giiH  126 (191)
T d1zara2          60 SARNEFRALQKLQGLAVPKVYAW------------EGNAVLMELIDAKELYRVRVENPDEVL-DMILEEVAKFYHRGIVH  126 (191)
T ss_dssp             HHHHHHHHHHHTTTSSSCCEEEE------------ETTEEEEECCCCEEGGGCCCSCHHHHH-HHHHHHHHHHHHTTEEC
T ss_pred             HHHHHHHHHHHccCCCcceEEEe------------cCCEEEEEeeccccccchhhHHHHHHH-HHHHHHHHHHhhCCEEE
Confidence            45678999999999999988875            134899999998887664 22344566 79999999999998   


Q ss_pred             ----CCCe------EEEecCCcccccccccccCCCCcccc-------c--cCCCCchhHHHHHHH
Q psy7174         106 ----PALL------KKFVGIGIGRHVCTLYCTRGAPELLF-------G--ARMYGVGIDMWAVGC  151 (188)
Q Consensus       106 ----~~~i------lkl~dfg~~~~~~~~~y~~~aPe~~~-------~--~~~~~~~~DiwslG~  151 (188)
                          |+|+      ++++|||.+...+.+    .+.+.+.       .  .+.|+.++|+||..-
T Consensus       127 rDiKP~NILv~~~~~~liDFG~a~~~~~~----~~~~~l~rd~~~~~~~f~r~y~~~~d~~s~~~  187 (191)
T d1zara2         127 GDLSQYNVLVSEEGIWIIDFPQSVEVGEE----GWREILERDVRNIITYFSRTYRTEKDINSAID  187 (191)
T ss_dssp             SCCSTTSEEEETTEEEECCCTTCEETTST----THHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
T ss_pred             ccCChhheeeeCCCEEEEECCCcccCCCC----CcHHHHHHHHHHHHHHHcCCCCCcccHHHHHH
Confidence                8888      489999987654422    1222111       0  123788899999753

>d1j7la_ d.144.1.6 (A:) Type IIIa 3',5"-aminoglycoside phosphotransferase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Type IIIa 3',5"-aminoglycoside phosphotransferase
species: Enterococcus faecalis [TaxId: 1351]

Probab=85.42  E-value=0.61  Score=32.45  Aligned_cols=70  Identities=9%  Similarity=-0.008  Sum_probs=45.5

Q ss_pred             hhhHHHHHHHHHHhCC-CCCeeEEeeecccccCCCCCCCCccEEEEeccccccHHHHH---HHHHHHHHHHHHHHHHHHh
Q psy7174          27 VETQAKAEGKQDRRLD-YANIIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFY---SHLRYLENQQILEGLQALK  102 (188)
Q Consensus        27 ~~~~~~~E~~il~~l~-h~niv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~---~~~~~~~~~qi~~gl~~lH  102 (188)
                      ...++.+|...++.+. +--+-+++.+.        .++...+++|+++++..+....   .....+. .++.+.+..||
T Consensus        52 ~~~~~~~E~~~l~~l~~~vpvP~vl~~~--------~~~~~~~lv~~~l~G~~~~~~~~~~~~~~~~~-~~l~~~l~~lH  122 (263)
T d1j7la_          52 TTYDVEREKDMMLWLEGKLPVPKVLHFE--------RHDGWSNLLMSEADGVLCSEEYEDEQSPEKII-ELYAECIRLFH  122 (263)
T ss_dssp             STTCHHHHHHHHHHHTTTSCCCCEEEEE--------EETTEEEEEEECCSSEEHHHHTTTCSCHHHHH-HHHHHHHHHHH
T ss_pred             chhhHHHHHHHHHHHhccCCCCcEEEEE--------ecCCceEEEEEecccccccccccccccHHHHH-HHHHHHHHHHh
Confidence            4456788999888775 32234444431        2345679999999999886531   1123344 67888899999


Q ss_pred             hcC
Q psy7174         103 SSM  105 (188)
Q Consensus       103 ~~~  105 (188)
                      +..
T Consensus       123 ~~~  125 (263)
T d1j7la_         123 SID  125 (263)
T ss_dssp             TSC
T ss_pred             ccC
Confidence            865

>d1nd4a_ d.144.1.6 (A:) Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase) {Bacteria (Klebsiella pneumoniae) [TaxId: 573]}

class: Alpha and beta proteins (a+b)
fold: Protein kinase-like (PK-like)
superfamily: Protein kinase-like (PK-like)
family: APH phosphotransferases
domain: Aminoglycoside 3'-phosphotransferase IIa (Kanamycin kinase)
species: Bacteria (Klebsiella pneumoniae) [TaxId: 573]

Probab=83.84  E-value=0.34  Score=33.71  Aligned_cols=71  Identities=7%  Similarity=0.003  Sum_probs=44.7

Q ss_pred             hhhhHHHHHHHHHHhCCCCC--eeEEeeecccccCCCCCCCCccEEEEeccccccHHHHHHHHHHHHHHHHHHHHHHHhh
Q psy7174          26 NVETQAKAEGKQDRRLDYAN--IIQYLSLPVETLQPTTLSTSSDYIVVKIFTKTTKARFYSHLRYLENQQILEGLQALKS  103 (188)
Q Consensus        26 ~~~~~~~~E~~il~~l~h~n--iv~~~~~~~~~~~~~~~~~~~~~iv~e~~~~~~l~~~~~~~~~~~~~qi~~gl~~lH~  103 (188)
                      .....+.+|...++.+....  +-+++.+.        .++...+++|+++++.++........... .++.+.|.-||+
T Consensus        46 ~~~~~l~~E~~~l~~L~~~gvpvP~v~~~~--------~~~~~~~~v~~~i~G~~~~~~~~~~~~~~-~~l~~~la~LH~  116 (255)
T d1nd4a_          46 GALNELQDEAARLSWLATTGVPCAAVLDVV--------TEAGRDWLLLGEVPGQDLLSSHLAPAEKV-SIMADAMRRLHT  116 (255)
T ss_dssp             CTTSCHHHHHHHHHHHHTTTCCBCCEEEEE--------ECSSCEEEEEECCSSEETTTSCCCHHHHH-HHHHHHHHHHTT
T ss_pred             cCHhHHHHHHHHHHHHHhcCCCCCceeeec--------ccccceEEEEEeeeccccccccccHHHHH-HHHHHHHHHHcc
Confidence            34456888999888775322  34455432        33467899999999887754311112233 467778888887


Q ss_pred             cC
Q psy7174         104 SM  105 (188)
Q Consensus       104 ~~  105 (188)
                      ..
T Consensus       117 ~~  118 (255)
T d1nd4a_         117 LD  118 (255)
T ss_dssp             SC
T ss_pred             CC
Confidence            54