BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7177
(66 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|321475567|gb|EFX86529.1| hypothetical protein DAPPUDRAFT_307840 [Daphnia pulex]
Length = 1180
Score = 77.8 bits (190), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 31/47 (65%), Positives = 41/47 (87%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
S+GHYTAYT H N+K+WHY+NDETVL + PQDEDF++ Y+LFY++R
Sbjct: 1117 ASSGHYTAYTRHVNSKDWHYYNDETVLSRAPQDEDFSHGYVLFYQRR 1163
>gi|242007158|ref|XP_002424409.1| predicted protein [Pediculus humanus corporis]
gi|212507809|gb|EEB11671.1| predicted protein [Pediculus humanus corporis]
Length = 845
Score = 76.3 bits (186), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 41/54 (75%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV G SAGHYTAY +P + +WH FNDETV Q+PQ++DF NAY+LFY+K+
Sbjct: 725 CVNHFGGASAGHYTAYAKNPQSGDWHLFNDETVTAQKPQEDDFCNAYVLFYQKQ 778
>gi|307183092|gb|EFN70009.1| Ubiquitin carboxyl-terminal hydrolase 32 [Camponotus floridanus]
Length = 1048
Score = 75.1 bits (183), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 41/54 (75%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV GVSAGHYTAY +P T W+Y+NDE +Q+PQDEDF+NAYILFY ++
Sbjct: 986 CVCHFGGVSAGHYTAYAKNPRTDVWYYYNDEITSKQKPQDEDFSNAYILFYSRQ 1039
>gi|332024377|gb|EGI64575.1| Ubiquitin carboxyl-terminal hydrolase 32 [Acromyrmex echinatior]
Length = 1053
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV GVSAGHYTAY +P T W+Y+NDE Q+PQDEDF+NAYILFY ++
Sbjct: 991 CVCHFGGVSAGHYTAYAKNPRTDVWYYYNDEITSRQKPQDEDFSNAYILFYSRQ 1044
>gi|307213501|gb|EFN88910.1| Ubiquitin carboxyl-terminal hydrolase 32 [Harpegnathos saltator]
Length = 1054
Score = 74.7 bits (182), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV GVSAGHYTAY +P T W+Y+NDE Q+PQDEDF+NAYILFY ++
Sbjct: 992 CVCHFGGVSAGHYTAYAKNPRTDVWYYYNDEITSRQKPQDEDFSNAYILFYSRQ 1045
>gi|383858846|ref|XP_003704910.1| PREDICTED: uncharacterized protein LOC100877443 [Megachile rotundata]
Length = 1050
Score = 74.7 bits (182), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/54 (61%), Positives = 40/54 (74%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV GVSAGHYTAY +P T W+Y+NDE Q+PQDEDF+NAYILFY ++
Sbjct: 988 CVCHFGGVSAGHYTAYAKNPRTDVWYYYNDEITSRQKPQDEDFSNAYILFYSRQ 1041
>gi|345487479|ref|XP_001600155.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
43-like [Nasonia vitripennis]
Length = 1022
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV GVSAGHYTAY +P T WHY+ND+ Q+PQ+EDF+NAYILFY ++
Sbjct: 960 CVCHFGGVSAGHYTAYAKNPQTDIWHYYNDDVTSRQKPQEEDFSNAYILFYSRQ 1013
>gi|350396230|ref|XP_003484486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like [Bombus
impatiens]
Length = 1052
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/54 (59%), Positives = 40/54 (74%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
CV GVSAGHYTAY +P T W+Y+NDE Q+PQ+EDF+NAYILFY ++
Sbjct: 990 CVCHFGGVSAGHYTAYAKNPRTDMWYYYNDEITSRQKPQEEDFSNAYILFYSRQ 1043
>gi|328715747|ref|XP_001949023.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Acyrthosiphon pisum]
Length = 898
Score = 70.5 bits (171), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/62 (51%), Positives = 45/62 (72%), Gaps = 3/62 (4%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR---DED 58
CV + S GHYT+YT H ++++WHY+NDET ++ P ED+ NAYILFYKK+ D+D
Sbjct: 833 CVCHTGSTSMGHYTSYTRHVHSEDWHYYNDETAIKTIPGQEDYCNAYILFYKKQGLPDDD 892
Query: 59 SD 60
+D
Sbjct: 893 AD 894
>gi|260807898|ref|XP_002598745.1| hypothetical protein BRAFLDRAFT_95861 [Branchiostoma floridae]
gi|229284019|gb|EEN54757.1| hypothetical protein BRAFLDRAFT_95861 [Branchiostoma floridae]
Length = 1291
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/54 (48%), Positives = 38/54 (70%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
C+ GV+AGHYT +T HP + W Y+NDETV + +P +ED N Y+LFY+++
Sbjct: 1024 CILHFGGVNAGHYTCFTKHPLSSSWRYYNDETVSQLQPSEEDAKNVYVLFYQRK 1077
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/49 (51%), Positives = 37/49 (75%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+GV+AGHYT +T HP + W Y+NDETV + +P +ED N Y+LFY+++
Sbjct: 1148 EGVNAGHYTCFTKHPLSSSWRYYNDETVSQLQPSEEDAKNVYVLFYQRK 1196
>gi|291238396|ref|XP_002739115.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 1366
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/48 (54%), Positives = 35/48 (72%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
GV+AGHYTA+T +P T +W YFNDE +Q P ED + Y+LFY+K+
Sbjct: 1233 GVNAGHYTAFTKNPLTNQWCYFNDEMTTKQEPTSEDAASVYVLFYQKK 1280
>gi|405961777|gb|EKC27523.1| Ubiquitin carboxyl-terminal hydrolase 4 [Crassostrea gigas]
Length = 1235
Score = 62.8 bits (151), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 25/51 (49%), Positives = 36/51 (70%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
G +AGHYT + HP W+Y+NDE+V +Q P+ +D+ NAYILFY ++ D
Sbjct: 1118 GANAGHYTTFAKHPLNGLWYYYNDESVSQQSPKKDDYKNAYILFYNRQGTD 1168
>gi|390334159|ref|XP_788815.3| PREDICTED: uncharacterized protein LOC583829 [Strongylocentrotus
purpuratus]
Length = 1214
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/48 (52%), Positives = 35/48 (72%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
GV+AGHYTA+ +P + +W Y NDETV Q P ++D +N YILFY ++
Sbjct: 1048 GVNAGHYTAFVKNPWSGQWQYCNDETVSHQEPLEQDASNVYILFYSRK 1095
>gi|427782161|gb|JAA56532.1| Putative ubiquitin c-terminal hydrolase [Rhipicephalus pulchellus]
Length = 879
Score = 60.5 bits (145), Expect = 1e-07, Method: Composition-based stats.
Identities = 29/60 (48%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQR-PQDEDFNNAYILFYKKRDEDSDVEVSGP 66
GV+ GHYTAYT H T EW+++NDE+V +Q P+ ED +AYILFY++ S+ + P
Sbjct: 784 GVNCGHYTAYTRHWTTGEWYHYNDESVCKQPLPRPEDQAHAYILFYQRHSAVSEEALGLP 843
>gi|340369388|ref|XP_003383230.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like
[Amphimedon queenslandica]
Length = 908
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 40/58 (68%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
CV +++GHYT Y+ P + +W+Y+NDETV E P D+D +AYILFY ++D ++
Sbjct: 733 CVCHFGTLNSGHYTNYSKQPVSHKWYYYNDETVSEITPSDKDNESAYILFYHRQDSNT 790
>gi|198433136|ref|XP_002122834.1| PREDICTED: similar to Ubiquitin carboxyl-terminal hydrolase family
protein [Ciona intestinalis]
Length = 962
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
C+ GV +GHY A+ HP T +WH FNDE + EQ +D AY+LFY+ +
Sbjct: 901 CMSHFGGVYSGHYVAHCKHPVTGKWHLFNDENISEQTLSSKDSAGAYVLFYQHK 954
>gi|302687378|ref|XP_003033369.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
gi|300107063|gb|EFI98466.1| hypothetical protein SCHCODRAFT_76094 [Schizophyllum commune H4-8]
Length = 1137
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHY AY L+ TK+W++F+D V E +D +NAY+LFY++R +
Sbjct: 903 GLGGGHYRAYALNHETKKWYHFDDSFVTEAEAKDSVNSNAYLLFYRRRSD 952
>gi|392565514|gb|EIW58691.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1086
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/48 (45%), Positives = 31/48 (64%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G GHY AY L+ T +W++F+D V E RP+ NAY+LFY++R
Sbjct: 1011 GSGGGHYRAYALNHVTGKWYHFDDSYVTESRPEAAVNENAYLLFYRRR 1058
>gi|320166287|gb|EFW43186.1| ubiquitin specific peptidase 11 [Capsaspora owczarzaki ATCC 30864]
Length = 1643
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 35/56 (62%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEV 63
G+S GHYTA+ LH T +W+ +ND + +P + + AY+LFY++R S V +
Sbjct: 1286 GMSGGHYTAFALHAPTNQWYNYNDSHCSKAQPHEVVNSEAYVLFYQRRHCASAVNL 1341
>gi|397498540|ref|XP_003820038.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan paniscus]
Length = 605
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 26/43 (60%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V P ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSPSQVRTSDAYLLFYE 597
>gi|156366016|ref|XP_001626937.1| predicted protein [Nematostella vectensis]
gi|156213831|gb|EDO34837.1| predicted protein [Nematostella vectensis]
Length = 359
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
GHYTAY HP +++WH FND V + AYILF++K D S +
Sbjct: 309 GGHYTAYCKHPQSRQWHCFNDSRVDQISSSRVTGPQAYILFFEKHDRKSSL 359
>gi|340503530|gb|EGR30106.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 549
Score = 48.9 bits (115), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G S GHYTA + K+W FND V +PQ NAY+LFY++R+E
Sbjct: 500 GTSGGHYTAAGFNFENKKWFQFNDSQVDSIQPQQVVNKNAYLLFYRRREE 549
>gi|299473323|emb|CBN77722.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 1943
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/68 (44%), Positives = 37/68 (54%), Gaps = 12/68 (17%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDED-----FNNAYILFYKKRD----ED 58
+S+GHY A T +WHYFND+ V E DED ++AYILFY +RD
Sbjct: 1857 ALSSGHYVASVKSQPTGKWHYFNDDQVTE---VDEDELGSSSSSAYILFYMRRDCAGLRI 1913
Query: 59 SDVEVSGP 66
DV SGP
Sbjct: 1914 EDVYPSGP 1921
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP + EWH +ND V + N AY+LFY+++ S
Sbjct: 1005 SGHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYEQQPHSS 1053
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
GHYTAYT HP T WH+F+D V + + AY+LFY+ D S +
Sbjct: 362 GGHYTAYTKHPETSTWHHFSDTRVSQISESQVQSSEAYVLFYELVDHSSRL 412
>gi|440799459|gb|ELR20504.1| ubiquitin specific protease 44 isoform 2, putative [Acanthamoeba
castellanii str. Neff]
Length = 549
Score = 48.1 bits (113), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G SAGHYTA+ H W +FND V PQ+ AY+LFY++R SD ++ P
Sbjct: 314 GPSAGHYTAFCYHTEQGTWLHFNDCRVSVSSPQEAASAQAYMLFYQRRSA-SDSKIPIP 371
>gi|342319397|gb|EGU11346.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 1438
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ +P +W+ F+D V E P+ + AY+LFY++R
Sbjct: 1209 GLGGGHYTAFAKNPENGKWYDFDDSRVTEINPERVKSSAAYLLFYRRR 1256
>gi|322800359|gb|EFZ21363.1| hypothetical protein SINV_03789 [Solenopsis invicta]
Length = 918
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W+ F+D+ V E P+ AY+LFYKK
Sbjct: 599 AGGGHYTCYALNPIANKWYEFDDQCVTEVSPETVKHCEAYVLFYKK 644
>gi|332026284|gb|EGI66421.1| Ubiquitin carboxyl-terminal hydrolase 33 [Acromyrmex echinatior]
Length = 918
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 27/46 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W+ F+D+ V E P+ AY+LFYKK
Sbjct: 599 AGGGHYTCYALNPIANKWYEFDDQCVTEVSPETVKHCEAYVLFYKK 644
>gi|324501641|gb|ADY40728.1| Ubiquitin carboxyl-terminal hydrolase 3 [Ascaris suum]
Length = 750
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 2/56 (3%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ V GVS+GHYT Y H N W++FND +V Q AYILFY +R+
Sbjct: 695 LVVHHGSGVSSGHYTCYGRHGN--HWYHFNDSSVKSCSEQSVAKQKAYILFYMRRN 748
>gi|123998135|gb|ABM86669.1| ubiquitin specific peptidase 2 [synthetic construct]
Length = 605
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 26/43 (60%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V + ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSRQVRTSDAYLLFYE 597
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/42 (50%), Positives = 26/42 (61%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
+GHYTAY HP T +WH +ND V R +D AY+LFY
Sbjct: 868 SGHYTAYCKHPYTGDWHEYNDSRVTPIRSRDIVSAEAYVLFY 909
>gi|410979933|ref|XP_003996335.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Felis catus]
Length = 943
Score = 47.0 bits (110), Expect = 0.001, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 2/59 (3%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRDEDSDVEVSG 65
G+ GHYTAY + +W+ F+D TV E P+DE AYILFY+KR+ SG
Sbjct: 510 GLQGGHYTAYCRNSLDGQWYSFDDSTV-EPLPEDEVSTRGAYILFYQKRNSIPPWSASG 567
>gi|16552833|dbj|BAB71388.1| unnamed protein product [Homo sapiens]
Length = 605
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
>gi|432110442|gb|ELK34059.1| Ubiquitin carboxyl-terminal hydrolase 2 [Myotis davidii]
Length = 599
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 549 GGHYTAYCRSPATGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 591
>gi|242002096|ref|XP_002435691.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215499027|gb|EEC08521.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 884
Score = 47.0 bits (110), Expect = 0.002, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+C G+ GHYTA +P W+ F+D V P+D +AY+LFY++++ D
Sbjct: 615 LCSHHGAGLQGGHYTACCKNPVDGNWYLFDDARVRPATPEDLMARDAYLLFYQRQNPD 672
>gi|402895527|ref|XP_003910877.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Papio anubis]
Length = 605
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
>gi|340717142|ref|XP_003397046.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
terrestris]
Length = 935
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W F+D+ V E P+ AY+LFYKK
Sbjct: 617 GGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCEAYVLFYKK 660
>gi|114640783|ref|XP_001166112.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 5 [Pan
troglodytes]
Length = 605
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
>gi|30584279|gb|AAP36388.1| Homo sapiens ubiquitin specific protease 2 [synthetic construct]
gi|60652721|gb|AAX29055.1| ubiquitin specific protease 2 [synthetic construct]
Length = 606
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
>gi|388454150|ref|NP_001252825.1| ubiquitin carboxyl-terminal hydrolase 2 [Macaca mulatta]
gi|355567137|gb|EHH23516.1| hypothetical protein EGK_06991 [Macaca mulatta]
gi|355752713|gb|EHH56833.1| hypothetical protein EGM_06315 [Macaca fascicularis]
gi|380789853|gb|AFE66802.1| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Macaca mulatta]
Length = 605
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
>gi|188528692|ref|NP_004196.4| ubiquitin carboxyl-terminal hydrolase 2 isoform a [Homo sapiens]
gi|20141855|sp|O75604.2|UBP2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|12804005|gb|AAH02854.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|12804195|gb|AAH02955.1| Ubiquitin specific peptidase 2 [Homo sapiens]
gi|119587889|gb|EAW67485.1| ubiquitin specific peptidase 2, isoform CRA_b [Homo sapiens]
gi|123983451|gb|ABM83458.1| ubiquitin specific peptidase 2 [synthetic construct]
gi|167887743|gb|ACA06097.1| ubiquitin carboxyl-terminal hydrolase 2 variant 1 [Homo sapiens]
Length = 605
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 555 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597
>gi|403262562|ref|XP_003923645.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Saimiri
boliviensis boliviensis]
Length = 606
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598
>gi|385303118|gb|EIF47212.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis AWRI1499]
Length = 1196
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
G+ GHYTAY + EW+Y++D V P D +AY+LFY++R ++
Sbjct: 1103 GIGGGHYTAYVRNFVDGEWYYYDDSRVSPADPLDAIRGSAYLLFYRRRSSEA 1154
>gi|383864033|ref|XP_003707484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Megachile
rotundata]
Length = 915
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W F+D+ V E P+ AY+LFYKK
Sbjct: 597 GGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCEAYVLFYKK 640
>gi|350416461|ref|XP_003490956.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Bombus
impatiens]
Length = 916
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W F+D+ V E P+ AY+LFYKK
Sbjct: 598 GGHYTCYALNPIVNKWFEFDDQCVTEVSPETVKHCEAYVLFYKK 641
>gi|291413016|ref|XP_002722763.1| PREDICTED: ubiquitin specific peptidase 2 [Oryctolagus cuniculus]
Length = 607
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 557 GGHYTAYCRSPATGEWHTFNDSSVTAMSSSQVRTSDAYLLFYE 599
>gi|344293060|ref|XP_003418242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Loxodonta
africana]
Length = 396
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 346 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 388
>gi|367012327|ref|XP_003680664.1| hypothetical protein TDEL_0C05640 [Torulaspora delbrueckii]
gi|359748323|emb|CCE91453.1| hypothetical protein TDEL_0C05640 [Torulaspora delbrueckii]
Length = 1178
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
G+ GHYTAY +W YF+D V E +P+ +AY+LFY +R E +
Sbjct: 970 GLGGGHYTAYV--KTNDKWFYFDDSRVTETKPESSIAGSAYLLFYLRRTESGKI 1021
>gi|301104609|ref|XP_002901389.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262100864|gb|EEY58916.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 563
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 35/51 (68%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
++ GHYTA L+ +T+EW FND +V + + ++AY+LFY++R+E S
Sbjct: 510 LNGGHYTAECLNADTQEWFDFNDGSVTAIKKPELYSSSAYMLFYQRREEKS 560
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP + EWH +ND V + N AY+LFY+++ S
Sbjct: 937 SGHYTAYCKHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYEQQPHSS 985
>gi|431908477|gb|ELK12073.1| Ubiquitin carboxyl-terminal hydrolase 2 [Pteropus alecto]
Length = 570
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 520 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQTRTSDAYLLFYE 562
>gi|403335950|gb|EJY67162.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1162
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
++ GHYTAY + +W FND V + PQ+ AY+LFY++RD
Sbjct: 1114 SLNGGHYTAYAFNSMYNKWFEFNDSHVSQATPQEVVTQGAYLLFYRRRD 1162
>gi|118138325|pdb|2IBI|A Chain A, Covalent Ubiquitin-Usp2 Complex
Length = 374
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 324 GGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 366
>gi|390596584|gb|EIN05985.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1280
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY L+ EW++F+D V + + NAY+LFYK+R
Sbjct: 1071 GLGGGHYRAYALNHENNEWYHFDDSFVSPAKAHESVNANAYLLFYKRR 1118
>gi|242020942|ref|XP_002430906.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212516124|gb|EEB18168.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 945
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 28/49 (57%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
+ GHYT Y L P T EW+ +D+ V + P+ Y+LFYKK +E
Sbjct: 537 ANGGHYTCYALSPFTGEWYELDDQCVTQVAPETVSNVECYVLFYKKSNE 585
>gi|403361870|gb|EJY80649.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1163
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
++ GHYTAY + +W FND V + PQ+ AY+LFY++RD
Sbjct: 1115 SLNGGHYTAYAFNSMYNKWFEFNDSHVSQATPQEVVTQGAYLLFYRRRD 1163
>gi|390354333|ref|XP_788200.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Strongylocentrotus purpuratus]
Length = 121
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G + GHY AY HP+ +W+ ++DE V + + + NAYILFY + D
Sbjct: 66 GTAGGHYIAYCRHPDDDQWYKYDDERVTQLKECNVVTTNAYILFYTSKMSRKD 118
>gi|430800750|pdb|3V6C|A Chain A, Crystal Structure Of Usp2 In Complex With Mutated
Ubiquitin
gi|430800752|pdb|3V6E|A Chain A, Crystal Structure Of Usp2 And A Mutant Form Of Ubiquitin
Length = 367
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 312 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 359
>gi|27371223|gb|AAH41366.1| USP2 protein [Homo sapiens]
gi|119587890|gb|EAW67486.1| ubiquitin specific peptidase 2, isoform CRA_c [Homo sapiens]
Length = 362
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 307 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 354
>gi|347965036|ref|XP_001231055.3| AGAP001052-PA [Anopheles gambiae str. PEST]
gi|333469366|gb|EAU76649.3| AGAP001052-PA [Anopheles gambiae str. PEST]
Length = 339
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY A HP T++W+ FND V E ++ +NAY+LFY++
Sbjct: 294 AGGHYVAVCKHPQTQQWNEFNDNYVTEAFERNLVTSNAYVLFYER 338
>gi|320162607|gb|EFW39506.1| hypothetical protein CAOG_00031 [Capsaspora owczarzaki ATCC 30864]
Length = 1105
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 29/57 (50%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVS 64
GV++GHY AY HP + W ++D E QD AYILFY + D E S
Sbjct: 837 GVNSGHYVAYAQHPQSGRWFEYDDSDTTEVSVQDVLDQEAYILFYSRESAAVDKERS 893
>gi|344313155|ref|NP_001230688.1| ubiquitin carboxyl-terminal hydrolase 2 isoform c [Homo sapiens]
Length = 362
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 307 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 354
>gi|114794332|pdb|2HD5|A Chain A, Usp2 In Complex With Ubiquitin
Length = 359
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 293 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 340
>gi|28565285|ref|NP_741994.1| ubiquitin carboxyl-terminal hydrolase 2 isoform b [Homo sapiens]
gi|410045962|ref|XP_003952100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Pan
troglodytes]
gi|24943173|gb|AAN65363.1|AF440755_1 ubiquitin specific protease 2b [Homo sapiens]
gi|119587888|gb|EAW67484.1| ubiquitin specific peptidase 2, isoform CRA_a [Homo sapiens]
gi|158257942|dbj|BAF84944.1| unnamed protein product [Homo sapiens]
gi|167887742|gb|ACA06096.1| ubiquitin carboxyl-terminal hydrolase 2 variant 2 [Homo sapiens]
Length = 396
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 341 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 388
>gi|426196599|gb|EKV46527.1| hypothetical protein AGABI2DRAFT_178845 [Agaricus bisporus var.
bisporus H97]
Length = 1277
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY L+ +EW++F+D V + +D +AY+LFY++R
Sbjct: 1014 GLGGGHYRAYVLNHANEEWYHFDDSFVRPAKAEDAVNADAYLLFYRRR 1061
>gi|409081365|gb|EKM81724.1| hypothetical protein AGABI1DRAFT_118809 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1253
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 31/48 (64%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY L+ +EW++F+D V + +D +AY+LFY++R
Sbjct: 990 GLGGGHYRAYVLNHANEEWYHFDDSFVRPAKAEDAVNADAYLLFYRRR 1037
>gi|241628902|ref|XP_002410027.1| ubiquitin-specific protease, putative [Ixodes scapularis]
gi|215503290|gb|EEC12784.1| ubiquitin-specific protease, putative [Ixodes scapularis]
Length = 340
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
+GHYTA LHP + EWH ND V E + AY+LFY+ + S +
Sbjct: 290 SGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFYEAATQSSRL 340
>gi|299856909|pdb|3NHE|A Chain A, High Resolution Structure (1.26a) Of Usp2a In Complex With
Ubiquitin
Length = 348
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 293 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 340
>gi|6573163|gb|AAF17574.1| ubiquitin specific processing protease [Rattus norvegicus]
Length = 618
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 568 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 610
>gi|81883550|sp|Q5U349.1|UBP2_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2; AltName:
Full=Ubiquitin-specific-processing protease testis;
Short=UBP-t
gi|55250569|gb|AAH85719.1| Ubiquitin specific peptidase 2 [Rattus norvegicus]
gi|149041433|gb|EDL95274.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
gi|149041435|gb|EDL95276.1| ubiquitin specific peptidase 2, isoform CRA_a [Rattus norvegicus]
Length = 618
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 568 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 610
>gi|354504731|ref|XP_003514427.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cricetulus griseus]
gi|354504733|ref|XP_003514428.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cricetulus griseus]
gi|354504735|ref|XP_003514429.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 3
[Cricetulus griseus]
Length = 613
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 563 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 605
>gi|221043762|dbj|BAH13558.1| unnamed protein product [Homo sapiens]
Length = 328
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 273 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 320
>gi|114052498|ref|NP_932760.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|114052502|ref|NP_058088.2| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-69 [Mus
musculus]
gi|17028406|gb|AAH17517.1| Ubiquitin specific peptidase 2 [Mus musculus]
gi|34874899|gb|AAQ83302.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|34874937|gb|AAQ83304.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
gi|74218334|dbj|BAE23782.1| unnamed protein product [Mus musculus]
Length = 619
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 569 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 611
>gi|114152901|sp|O88623.2|UBP2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|34874927|gb|AAQ83303.1| deubiquitinating enzyme Usp2-69 [Mus musculus]
Length = 613
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 563 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 605
>gi|118364914|ref|XP_001015678.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89297445|gb|EAR95433.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1196
Score = 45.8 bits (107), Expect = 0.003, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
+S GHYTAY +P +W FND +V E ++ AY+LFYK+R++
Sbjct: 1143 MSGGHYTAYAKNPIYNKWFDFNDSSVSESSTKEIVSKAAYVLFYKRREK 1191
>gi|119610763|gb|EAW90357.1| hCG1991532, isoform CRA_d [Homo sapiens]
Length = 409
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 327 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 375
>gi|255716176|ref|XP_002554369.1| KLTH0F03674p [Lachancea thermotolerans]
gi|238935752|emb|CAR23932.1| KLTH0F03674p [Lachancea thermotolerans CBS 6340]
Length = 1198
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 30/49 (61%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
HYTA+ +P +W+YF+D V E P+ AY+LFY++R E DV
Sbjct: 1009 HYTAFAKNPVDGKWYYFDDSRVSETDPETSVSGAAYLLFYRRRVEGPDV 1057
>gi|395848444|ref|XP_003796860.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Otolemur
garnettii]
Length = 606
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598
>gi|442748253|gb|JAA66286.1| Putative ubiquitin specific peptidase 2 [Ixodes ricinus]
Length = 373
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
+GHYTA LHP + EWH ND V E + AY+LFY+ + S +
Sbjct: 323 SGHYTATCLHPKSGEWHECNDTKVTEVSSSRVASSEAYVLFYEAATQSSRL 373
>gi|260836461|ref|XP_002613224.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
gi|229298609|gb|EEN69233.1| hypothetical protein BRAFLDRAFT_210578 [Branchiostoma floridae]
Length = 346
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
GHYTAY +P T +WH FND V + AY+LFY+ RD+
Sbjct: 297 GGHYTAYCKYPTTGDWHCFNDSRVSSISASSVISSEAYVLFYELRDK 343
>gi|395520122|ref|XP_003764186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Sarcophilus
harrisii]
Length = 599
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 549 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYE 591
>gi|73954632|ref|XP_859639.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Canis
lupus familiaris]
Length = 606
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598
>gi|410972085|ref|XP_003992491.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Felis catus]
Length = 606
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598
>gi|348574067|ref|XP_003472812.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Cavia porcellus]
Length = 611
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 561 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 603
>gi|218675768|gb|AAI69209.2| ubiquitin specific protease 6 [synthetic construct]
Length = 610
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 528 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 576
>gi|37331|emb|CAA45109.1| oncogene [Homo sapiens]
Length = 586
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 504 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 552
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP + EWH +ND V + N AY+LFY+++ S
Sbjct: 929 SGHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYEQQPHSS 977
>gi|301756532|ref|XP_002914115.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Ailuropoda
melanoleuca]
gi|281347816|gb|EFB23400.1| hypothetical protein PANDA_001954 [Ailuropoda melanoleuca]
Length = 606
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598
>gi|195120177|ref|XP_002004605.1| GI20022 [Drosophila mojavensis]
gi|193909673|gb|EDW08540.1| GI20022 [Drosophila mojavensis]
Length = 1348
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRP-----QDEDFNNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P QD N AY+LFY++R
Sbjct: 898 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPENDIEQDIINNEAYMLFYQRR 956
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 957 SADAAAECSG 966
>gi|345799830|ref|XP_003434615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Canis lupus
familiaris]
Length = 395
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 340 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 387
>gi|126326536|ref|XP_001370349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1
[Monodelphis domestica]
Length = 600
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 550 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRSSDAYLLFYE 592
>gi|426349259|ref|XP_004042229.1| PREDICTED: coiled-coil domain-containing protein 144A-like [Gorilla
gorilla gorilla]
Length = 492
Score = 45.4 bits (106), Expect = 0.004, Method: Composition-based stats.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND E+ P + D ++AYILFY+++ D
Sbjct: 410 LSGGHYVTYAKNPNCK-WYCYNDSICEERHPDEIDTDSAYILFYEQQRID 458
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 29/49 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP + EWH +ND V + N AY+LFY+++ S
Sbjct: 927 SGHYTAYCKHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYEQQPHSS 975
>gi|194212776|ref|XP_001501250.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Equus
caballus]
Length = 606
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598
>gi|351705889|gb|EHB08808.1| Ubiquitin carboxyl-terminal hydrolase 2 [Heterocephalus glaber]
Length = 612
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 562 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 604
>gi|195027778|ref|XP_001986759.1| GH20353 [Drosophila grimshawi]
gi|193902759|gb|EDW01626.1| GH20353 [Drosophila grimshawi]
Length = 1273
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 38/70 (54%), Gaps = 6/70 (8%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRP-----QDEDFNNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P QD N AY+LFY++R
Sbjct: 826 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPELDIEQDIINNEAYMLFYQRR 884
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 885 SVDASAECSG 894
>gi|347965032|ref|XP_003437188.1| AGAP001052-PC [Anopheles gambiae str. PEST]
gi|333469368|gb|EGK97274.1| AGAP001052-PC [Anopheles gambiae str. PEST]
Length = 724
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY A HP T++W+ FND V E ++ +NAY+LFY++
Sbjct: 677 STAGGHYVAVCKHPQTQQWNEFNDNYVTEAFERNLVTSNAYVLFYER 723
>gi|37334|emb|CAA45111.1| oncogene [Homo sapiens]
Length = 1089
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1007 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1055
>gi|427795287|gb|JAA63095.1| Putative ubiquitin c-terminal hydrolase posttranslational
modification, partial [Rhipicephalus pulchellus]
Length = 929
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ AGHYTAY + T +W++F+D +V + AY+LFY +RD
Sbjct: 847 GMGAGHYTAYAKNKETHKWYHFDDSSVSSATEDNVVSKAAYVLFYMRRD 895
>gi|340376728|ref|XP_003386884.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Amphimedon
queenslandica]
Length = 1191
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKKRD 56
++ GHYTA+ L+P +W+ F+D VL + +D+ + NAYILFY +R+
Sbjct: 959 MNRGHYTAHCLNPVNNQWYIFDDHRVLPVQSEDQLVSQNAYILFYVRRN 1007
>gi|119610762|gb|EAW90356.1| hCG1991532, isoform CRA_c [Homo sapiens]
Length = 1089
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1007 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1055
>gi|449675268|ref|XP_004208370.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like, partial
[Hydra magnipapillata]
Length = 284
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
V S G GHYT++ HP+T WH +ND V E +AY+LFY+
Sbjct: 230 VNHSGGTLGGHYTSFVKHPDTGSWHIYNDSIVGETSVSRLISASAYLLFYE 280
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY +PN+ EW+ FND V ++AY+LFY+
Sbjct: 618 GGHYTAYCRNPNSGEWYTFNDSRVTPMSSSQVRSSDAYVLFYE 660
>gi|53987037|gb|AAV27298.1| poly-histidine-tagged Usp2-cc [Ubiquitin protease vector pHUsp2-cc]
Length = 378
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 323 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 370
>gi|410050929|ref|XP_003952996.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
6 [Pan troglodytes]
Length = 1406
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1324 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1372
>gi|354504737|ref|XP_003514430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 4
[Cricetulus griseus]
Length = 396
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 341 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 388
>gi|348574069|ref|XP_003472813.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Cavia porcellus]
Length = 396
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 341 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 388
>gi|348668895|gb|EGZ08718.1| hypothetical protein PHYSODRAFT_564649 [Phytophthora sojae]
Length = 583
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 34/51 (66%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
++ GHYTA L+ + +EW FND +V + + ++AY+LFY++R+E S
Sbjct: 530 LNGGHYTAECLNADMQEWFDFNDSSVTAIKKPELYSSSAYMLFYQRREEKS 580
>gi|119610761|gb|EAW90355.1| hCG1991532, isoform CRA_b [Homo sapiens]
Length = 1406
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1324 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1372
>gi|157123971|ref|XP_001653999.1| hypothetical protein AaeL_AAEL009702 [Aedes aegypti]
gi|108874166|gb|EAT38391.1| AAEL009702-PA [Aedes aegypti]
Length = 1214
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V GHYT++ H T +W F+D+ V + P+D AY+LFY+K +
Sbjct: 613 VGGGHYTSFAKHEPTGKWFEFDDQLVTQVSPEDVQNCEAYVLFYRKNN 660
>gi|417403199|gb|JAA48417.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 602
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 552 GGHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFYE 594
>gi|344240807|gb|EGV96910.1| Ubiquitin carboxyl-terminal hydrolase 2 [Cricetulus griseus]
Length = 379
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 324 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 371
>gi|301103855|ref|XP_002901013.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
gi|262101351|gb|EEY59403.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
Length = 1100
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 26/50 (52%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTA +P + W FND QD AY+LFY +RDE
Sbjct: 1050 GLGGGHYTAVAKNPVNRRWFDFNDSHTSATTAQDAVSAKAYVLFYIRRDE 1099
>gi|109638751|ref|NP_004496.2| ubiquitin carboxyl-terminal hydrolase 6 [Homo sapiens]
gi|50403738|sp|P35125.2|UBP6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 6; AltName:
Full=Deubiquitinating enzyme 6; AltName:
Full=Proto-oncogene TRE-2; AltName: Full=Ubiquitin
thioesterase 6; AltName:
Full=Ubiquitin-specific-processing protease 6
gi|24474450|gb|AAN38838.1| ubiquitin-specific protease USP6 [Homo sapiens]
Length = 1406
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1324 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1372
>gi|3386552|gb|AAC28393.1| ubiquitin-specific protease UBP41 [Mus musculus]
Length = 353
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 298 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 345
>gi|6573165|gb|AAF17575.1| testis ubiquitin specific processing protease [Rattus norvegicus]
gi|149041436|gb|EDL95277.1| ubiquitin specific peptidase 2, isoform CRA_c [Rattus norvegicus]
Length = 396
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 341 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 388
>gi|57524946|ref|NP_001006134.1| ubiquitin carboxyl-terminal hydrolase 4 [Gallus gallus]
gi|53131277|emb|CAG31805.1| hypothetical protein RCJMB04_11i7 [Gallus gallus]
Length = 964
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 31/59 (52%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
+ GHYTAY + EW+YF+D +V AY+LFY++RD + V S P
Sbjct: 896 AMGVGHYTAYAKNKVNGEWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDNEEHVAPSPP 954
>gi|91084663|ref|XP_967750.1| PREDICTED: similar to ubiquitin specific protease 41 [Tribolium
castaneum]
gi|270008628|gb|EFA05076.1| hypothetical protein TcasGA2_TC015173 [Tribolium castaneum]
Length = 764
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP TK WH +ND V + AY+LFY++ + S
Sbjct: 714 SGHYTAYCRHPYTKAWHEYNDSRVSSISSKAIVSGEAYVLFYEQEGQKS 762
>gi|148693613|gb|EDL25560.1| ubiquitin specific peptidase 2, isoform CRA_a [Mus musculus]
Length = 411
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 356 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 403
>gi|7670525|dbj|BAA95110.1| unnamed protein product [Mus musculus]
Length = 393
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 338 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 385
>gi|397477926|ref|XP_003810314.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
6 [Pan paniscus]
Length = 1328
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1246 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1294
>gi|347965034|ref|XP_003437189.1| AGAP001052-PB [Anopheles gambiae str. PEST]
gi|333469367|gb|EGK97273.1| AGAP001052-PB [Anopheles gambiae str. PEST]
Length = 533
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY A HP T++W+ FND V E ++ +NAY+LFY++
Sbjct: 486 STAGGHYVAVCKHPQTQQWNEFNDNYVTEAFERNLVTSNAYVLFYER 532
>gi|355727928|gb|AES09357.1| ubiquitin specific peptidase 2 [Mustela putorius furo]
Length = 217
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 163 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 210
>gi|37674279|ref|NP_932759.1| ubiquitin carboxyl-terminal hydrolase 2 isoform Usp2-45 [Mus
musculus]
gi|34874871|gb|AAQ83301.1| deubiquitinating enzyme Usp2-45 [Mus musculus]
gi|148693614|gb|EDL25561.1| ubiquitin specific peptidase 2, isoform CRA_b [Mus musculus]
Length = 396
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 341 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 388
>gi|432113608|gb|ELK35890.1| Ubiquitin carboxyl-terminal hydrolase 32 [Myotis davidii]
Length = 1647
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1565 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQKGID 1613
>gi|350590595|ref|XP_003483101.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like, partial
[Sus scrofa]
Length = 390
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 308 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 356
>gi|297715859|ref|XP_002834270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Pongo
abelii]
Length = 491
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +ND E P + D ++AYILFY+++ D
Sbjct: 409 LSGGHYVTYAKNPNCK-WYCYNDSICEECHPDEIDTDSAYILFYEQQGID 457
>gi|395531968|ref|XP_003768045.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like, partial
[Sarcophilus harrisii]
Length = 391
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1 MCVRP----------SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYIL 50
+C++P S + GHY Y +PN K W+ +ND + E P + D ++AYIL
Sbjct: 291 VCIKPIYNLYAISCHSGIMGGGHYVTYAKNPNNK-WYCYNDSSCKELHPDEIDTDSAYIL 349
Query: 51 FYKKRDED 58
FY+++ D
Sbjct: 350 FYEQQGMD 357
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP + EWH +ND V + + AY+LFY+++ S
Sbjct: 699 SGHYTAYCKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQPHSS 747
>gi|390345682|ref|XP_003726385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32
[Strongylocentrotus purpuratus]
Length = 1718
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 35/47 (74%), Gaps = 2/47 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY +Y+++PN K+W+ +ND +V E + ++ D +NAY+LFY+ R
Sbjct: 1638 LGGGHYVSYSVNPN-KKWYCYNDSSVKEVK-EEIDMDNAYMLFYECR 1682
>gi|417400194|gb|JAA47059.1| Putative ubiquitin carboxyl-terminal hydrolase 2 [Desmodus
rotundus]
Length = 396
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 346 GGHYTAYCRSPVTGEWHTFNDSSVTSMFSSQVRTSDAYLLFYE 388
>gi|432118440|gb|ELK38094.1| Ubiquitin carboxyl-terminal hydrolase 11 [Myotis davidii]
Length = 379
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 34/59 (57%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D S ++ P
Sbjct: 300 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVAENQIESKAAYVLFYQRQDVASRLKTKTP 358
>gi|449663025|ref|XP_002154564.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like, partial
[Hydra magnipapillata]
Length = 490
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
C+ S ++ GHYT++ H + +W+YFND+ + P + + + Y+LFYKK
Sbjct: 436 CICHSGTLNEGHYTSFAKHED--KWYYFNDDIYTQLEPSESNRDGVYVLFYKK 486
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY +H W +FND TV + AYILFY +R + E
Sbjct: 423 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVERQARAGAE 480
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
+GHYTAY HP + EWH +ND V + + AY+LFY+++ S +
Sbjct: 773 SGHYTAYCKHPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFYEQQPHSSHL 823
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 30/60 (50%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY +H W +FND TV + AYILFY +R + E
Sbjct: 461 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVERQARAGAE 518
>gi|323450041|gb|EGB05925.1| hypothetical protein AURANDRAFT_38275 [Aureococcus anophagefferens]
Length = 581
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
S G+ GHYTA + T+ W+++ND V P + AY+LFYK++
Sbjct: 527 SGGLGGGHYTATAIDDATQVWYHYNDSLVSRADPSTVVSSQAYVLFYKRK 576
>gi|157127579|ref|XP_001661099.1| ubiquitin specific protease 2, putative [Aedes aegypti]
gi|108872885|gb|EAT37110.1| AAEL010854-PA [Aedes aegypti]
Length = 934
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY A HP TKEW+ FND V E + ++AY+LFY++
Sbjct: 888 TAGGHYVAVCKHPVTKEWNEFNDNFVSETSERSLVTSSAYVLFYER 933
>gi|427778559|gb|JAA54731.1| Putative ubiquitin specific peptidase 2 [Rhipicephalus pulchellus]
Length = 494
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 28/51 (54%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
+GHYTA LHP + EWH ND V E + AY+LFY+ + S +
Sbjct: 444 SGHYTATCLHPKSGEWHECNDTKVSEVSASRVVSSEAYVLFYEAATQSSRL 494
>gi|301776002|ref|XP_002923425.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Ailuropoda
melanoleuca]
Length = 1653
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1571 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1619
>gi|358417223|ref|XP_869385.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 isoform 3 [Bos
taurus]
Length = 1597
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1515 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1563
>gi|3800764|gb|AAC68865.1| ubiquitin specific protease 66 [Gallus gallus]
Length = 587
Score = 45.1 bits (105), Expect = 0.006, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P+ +EWH FND V ++AY+LFY+
Sbjct: 334 GGHYTAYCKEPHLQEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 376
>gi|410980578|ref|XP_003996654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Felis catus]
Length = 1275
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1193 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1241
>gi|440908871|gb|ELR58849.1| Ubiquitin carboxyl-terminal hydrolase 32, partial [Bos grunniens
mutus]
Length = 1586
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1504 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1552
>gi|297486436|ref|XP_002695689.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Bos taurus]
gi|296476967|tpg|DAA19082.1| TPA: ubiquitin specific peptidase 32 [Bos taurus]
Length = 1543
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1461 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1509
>gi|426237054|ref|XP_004012476.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Ovis aries]
Length = 1275
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1193 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1241
>gi|417406639|gb|JAA49969.1| Putative ubiquitin carboxyl-terminal hydrolase 32 [Desmodus rotundus]
Length = 1619
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1537 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1585
>gi|47682349|gb|AAH70497.1| USP32 protein, partial [Homo sapiens]
Length = 367
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 285 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 333
>gi|345805692|ref|XP_537710.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 isoform 1 [Canis
lupus familiaris]
Length = 1275
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1193 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1241
>gi|30802104|gb|AAH51399.1| Usp32 protein, partial [Mus musculus]
Length = 679
Score = 44.7 bits (104), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 597 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 645
>gi|345330137|ref|XP_001510553.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Ornithorhynchus
anatinus]
Length = 1718
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 37/68 (54%), Gaps = 11/68 (16%)
Query: 1 MCVRP----------SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYIL 50
+C++P S + GHY Y +PN K W+ +ND + E P + D ++AYIL
Sbjct: 1618 VCIKPIYNLYAISCHSGILGGGHYVTYAKNPNNK-WYCYNDSSCKELHPDEIDTDSAYIL 1676
Query: 51 FYKKRDED 58
FY+++ D
Sbjct: 1677 FYEQQGID 1684
>gi|119614763|gb|EAW94357.1| ubiquitin specific peptidase 32, isoform CRA_b [Homo sapiens]
Length = 690
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 608 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 656
>gi|346971145|gb|EGY14597.1| ubiquitin carboxyl-terminal hydrolase [Verticillium dahliae VdLs.17]
Length = 1451
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + +W++FND +V + + AY+LFY++R S V + GP
Sbjct: 1174 GLGGGHYTAWAKNFVDNQWYHFNDTSVSAGKAESSVTKAAYLLFYRRR---STVPLGGP 1229
>gi|66267172|gb|AAH94680.1| USP32 protein, partial [Homo sapiens]
Length = 389
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 307 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 355
>gi|405967141|gb|EKC32341.1| Ubiquitin carboxyl-terminal hydrolase 32 [Crassostrea gigas]
Length = 1526
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E + D N+AYILFY++++ D
Sbjct: 1445 LGGGHYVCYAKNPNQK-WYCYNDSSCKECSVEQMDCNSAYILFYERQNID 1493
>gi|397466725|ref|XP_003805096.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Pan
paniscus]
Length = 521
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 439 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 487
>gi|395749283|ref|XP_002827724.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Pongo
abelii]
Length = 469
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 387 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 435
>gi|338710993|ref|XP_001503831.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Equus caballus]
Length = 1605
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1523 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1571
>gi|119614764|gb|EAW94358.1| ubiquitin specific peptidase 32, isoform CRA_c [Homo sapiens]
Length = 582
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 500 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 548
>gi|431890876|gb|ELK01755.1| Ubiquitin carboxyl-terminal hydrolase 32 [Pteropus alecto]
Length = 1251
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1169 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1217
>gi|412988619|emb|CCO17955.1| unnamed protein product [Bathycoccus prasinos]
Length = 1264
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD----EDFNNAYILFYKKRD 56
+ GHYTAY H + WH ++D T RP D ++ N Y+LFYK++D
Sbjct: 1147 SMGGGHYTAYAKHAESGSWHSYDDSTC---RPIDVNSVQESNAGYVLFYKRKD 1196
>gi|344238828|gb|EGV94931.1| Ubiquitin carboxyl-terminal hydrolase 32 [Cricetulus griseus]
Length = 985
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 903 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 951
>gi|429863441|gb|ELA37892.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum gloeosporioides
Nara gc5]
Length = 1628
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTAY + +W+ +ND +V + P+ AY+LFY++R SD + GP
Sbjct: 1344 GLGGGHYTAYGRNFVDGQWYNYNDTSVSKTSPESVITKAAYLLFYRRR---SDGPLGGP 1399
>gi|302410611|ref|XP_003003139.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
gi|261358163|gb|EEY20591.1| ubiquitin carboxyl-terminal hydrolase [Verticillium albo-atrum
VaMs.102]
Length = 1870
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + +W++FND +V + + AY+LFY++R S V + GP
Sbjct: 1593 GLGGGHYTAWAKNFVDNQWYHFNDTSVSAGKAESSVTKAAYLLFYRRR---SAVPLGGP 1648
>gi|301608620|ref|XP_002933869.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Xenopus
(Silurana) tropicalis]
Length = 1597
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1515 LGGGHYVTYAKNPNAK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGVD 1563
>gi|26328191|dbj|BAC27836.1| unnamed protein product [Mus musculus]
Length = 98
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 16 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGIDC 65
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 44.7 bits (104), Expect = 0.008, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V G +GHYT+Y H +W +FND TV P+ AYILFY +R
Sbjct: 415 VHHGSGAGSGHYTSYARHEG--QWFHFNDSTVTPCEPETVAKCKAYILFYIRR 465
>gi|327265717|ref|XP_003217654.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Anolis
carolinensis]
Length = 908
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTAY + +W+YF+D +V + AY+LFY++RD+
Sbjct: 834 GMGVGHYTAYAKNKINGKWYYFDDSSVSPASEEQIVTKAAYVLFYQRRDD 883
>gi|37747599|gb|AAH58994.1| Usp32 protein, partial [Mus musculus]
Length = 846
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 764 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 812
>gi|351699503|gb|EHB02422.1| Ubiquitin carboxyl-terminal hydrolase 11, partial [Heterocephalus
glaber]
Length = 911
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 832 GIRDGHYTTFACNKDSGQWHYFDDSSVSPVNENQIESKAAYVLFYQRQD 880
>gi|291405658|ref|XP_002719128.1| PREDICTED: ubiquitin specific protease 32 [Oryctolagus cuniculus]
Length = 1607
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1525 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGLD 1573
>gi|310798441|gb|EFQ33334.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola M1.001]
Length = 1490
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 3/59 (5%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTAY + +W+ +ND +V + P+ AY+LFY++R SD + GP
Sbjct: 1200 GLGGGHYTAYGRNFVDGQWYNYNDTSVSKTSPESVVTRAAYLLFYRRR---SDGPLGGP 1255
>gi|260801088|ref|XP_002595428.1| hypothetical protein BRAFLDRAFT_119038 [Branchiostoma floridae]
gi|229280674|gb|EEN51440.1| hypothetical protein BRAFLDRAFT_119038 [Branchiostoma floridae]
Length = 922
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 31/51 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
++ GHYTA++ +P W+ F+D VL +D ++AYILFY+ R +
Sbjct: 723 MTGGHYTAFSKNPVDGRWYKFDDTKVLPVSDEDVQTSDAYILFYQSRSSSA 773
>gi|344285327|ref|XP_003414413.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Loxodonta
africana]
Length = 1617
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 32/50 (64%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN+K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1535 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQRID 1583
>gi|119614762|gb|EAW94356.1| ubiquitin specific peptidase 32, isoform CRA_a [Homo sapiens]
Length = 982
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 900 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 948
>gi|354477156|ref|XP_003500788.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Cricetulus
griseus]
Length = 1771
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1689 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1737
>gi|393222219|gb|EJD07703.1| UCH-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 1210
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY + T +W++F+D V P D +AY+LFYK+R
Sbjct: 984 GLGGGHYRAYAKNHETDKWYHFDDTHVSVADPADAVNRSAYLLFYKRR 1031
>gi|348581460|ref|XP_003476495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cavia
porcellus]
Length = 932
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + + +W+YF+D V AY+LFY++RDED
Sbjct: 844 AMGVGHYTAYAKNKFSGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDED 894
>gi|402086482|gb|EJT81380.1| ubiquitin specific peptidase 11 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 1532
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + EW+ +ND +V +Q+ ++AY+LFY++R SD+ + GP
Sbjct: 1245 GLGGGHYTAFAKNFIDNEWYDYNDSSVTKQKDLSRMVTSSAYLLFYRRR---SDIPLGGP 1301
>gi|351698664|gb|EHB01583.1| Ubiquitin carboxyl-terminal hydrolase 32 [Heterocephalus glaber]
Length = 1565
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1483 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1531
>gi|348678876|gb|EGZ18693.1| hypothetical protein PHYSODRAFT_503684 [Phytophthora sojae]
Length = 1124
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTA +P + W FND E +D + AY+LFY +RD+
Sbjct: 1074 GLGGGHYTAVAKNPVNECWFNFNDSHTSEASAEDAVSSRAYVLFYIRRDQ 1123
>gi|320582331|gb|EFW96548.1| Ubiquitin carboxyl-terminal hydrolase [Ogataea parapolymorpha DL-1]
Length = 1127
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYTAY + +W+YF+D V P + +AY+LFY+KR
Sbjct: 935 GLGGGHYTAYAKNFVDGKWYYFDDSRVSVVDPTESIRGSAYLLFYRKR 982
>gi|51592088|ref|NP_446226.2| ubiquitin carboxyl-terminal hydrolase 2 [Rattus norvegicus]
gi|6492126|gb|AAF14190.1|AF106659_1 deubiquitinating enzyme Ubp69 [Rattus norvegicus]
Length = 618
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+ FY+
Sbjct: 568 GGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFYE 610
>gi|449437492|ref|XP_004136526.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 8-like [Cucumis sativus]
Length = 602
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 35/56 (62%), Gaps = 8/56 (14%)
Query: 5 PSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDE 57
P +G+ AGHYTAY LH +W+ F+D+ V+ P ED + AY+LFYK+ E
Sbjct: 551 PLEGMGAGHYTAYVLHGG--KWYDFDDDRVI---PVSEDVVKSSAAYVLFYKRIAE 601
>gi|449479877|ref|XP_002196656.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Taeniopygia
guttata]
Length = 1557
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1475 MGGGHYVTYAKNPNNK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGVD 1523
>gi|348553561|ref|XP_003462595.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 1
[Cavia porcellus]
Length = 956
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 877 GIRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 925
>gi|194217681|ref|XP_001918201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like [Equus
caballus]
Length = 1230
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV E P+DE + AYILFY+KR+
Sbjct: 759 LQGGHYTAYCRNSLDGQWYSYDDSTV-EPLPEDEVNTRGAYILFYQKRN 806
>gi|348567432|ref|XP_003469503.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Cavia
porcellus]
Length = 1562
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1480 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1528
>gi|348553563|ref|XP_003462596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like isoform 2
[Cavia porcellus]
Length = 929
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 850 GIRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 898
>gi|344290216|ref|XP_003416834.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Loxodonta
africana]
Length = 1134
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 28/48 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + W+ ++D TV R + + AYILFY+KRD
Sbjct: 657 LQGGHYTAYCRNSLDGRWYSYDDSTVEPLREDEVNTRGAYILFYQKRD 704
>gi|332258921|ref|XP_003278539.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
32 [Nomascus leucogenys]
Length = 1568
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1486 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1534
>gi|296201917|ref|XP_002748235.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Callithrix
jacchus]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|126032299|ref|NP_001025105.1| ubiquitin specific protease 32 [Mus musculus]
gi|162317806|gb|AAI56266.1| Ubiquitin specific peptidase 32 [synthetic construct]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|403275332|ref|XP_003929404.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Saimiri
boliviensis boliviensis]
Length = 1536
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1454 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1502
>gi|291220896|ref|XP_002730462.1| PREDICTED: ubiquitin specific peptidase 15-like [Saccoglossus
kowalevskii]
Length = 1624
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY AY ++PN W+ +ND T E + + D +NAY+LFY+++
Sbjct: 1543 LGGGHYVAYAINPN-DNWYIYNDSTCKEIKEELIDTDNAYMLFYERQ 1588
>gi|118100328|ref|XP_415892.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Gallus gallus]
Length = 1660
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1578 MGGGHYVTYAKNPNNK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGVD 1626
>gi|13560797|gb|AAK30207.1|AF350251_1 ubiquitin specific protease [Homo sapiens]
Length = 1274
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1192 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1240
>gi|348678861|gb|EGZ18678.1| hypothetical protein PHYSODRAFT_346365 [Phytophthora sojae]
Length = 1168
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 28/50 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTA +P + W FND E +D + AY+LFY +RD+
Sbjct: 1118 GLGGGHYTAVAKNPVNECWFNFNDSHTSEASAEDAVSSRAYVLFYIRRDQ 1167
>gi|444721005|gb|ELW61765.1| Ubiquitin carboxyl-terminal hydrolase 32 [Tupaia chinensis]
Length = 1622
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1540 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1588
>gi|355568599|gb|EHH24880.1| hypothetical protein EGK_08611 [Macaca mulatta]
gi|380817282|gb|AFE80515.1| ubiquitin carboxyl-terminal hydrolase 32 [Macaca mulatta]
gi|383408239|gb|AFH27333.1| ubiquitin carboxyl-terminal hydrolase 32 [Macaca mulatta]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|328711432|ref|XP_003244535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Acyrthosiphon pisum]
Length = 571
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V +GV +GHYT+Y + +W+ +NDE V E + AY+LFY KRD
Sbjct: 512 VHDGEGVGSGHYTSYAVDSTEGQWYEYNDEKVHEVDASFVENVQAYLLFYIKRD 565
>gi|114669727|ref|XP_001142267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 isoform 2 [Pan
troglodytes]
gi|410262322|gb|JAA19127.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410262324|gb|JAA19128.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410294718|gb|JAA25959.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410294720|gb|JAA25960.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410294722|gb|JAA25961.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342839|gb|JAA40366.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342841|gb|JAA40367.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342843|gb|JAA40368.1| ubiquitin specific peptidase 32 [Pan troglodytes]
gi|410342845|gb|JAA40369.1| ubiquitin specific peptidase 32 [Pan troglodytes]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|387539806|gb|AFJ70530.1| ubiquitin carboxyl-terminal hydrolase 32 [Macaca mulatta]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|148683809|gb|EDL15756.1| mCG11277 [Mus musculus]
Length = 1472
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1390 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1438
>gi|157820169|ref|NP_001100502.1| ubiquitin carboxyl-terminal hydrolase 32 [Rattus norvegicus]
gi|149053721|gb|EDM05538.1| ubiquitin specific protease 32 (predicted) [Rattus norvegicus]
Length = 1431
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1349 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1397
>gi|22550104|ref|NP_115971.2| ubiquitin carboxyl-terminal hydrolase 32 [Homo sapiens]
gi|47606649|sp|Q8NFA0.1|UBP32_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 32; AltName:
Full=Deubiquitinating enzyme 32; AltName: Full=Renal
carcinoma antigen NY-REN-60; AltName: Full=Ubiquitin
thioesterase 32; AltName:
Full=Ubiquitin-specific-processing protease 32; Flags:
Precursor
gi|22532405|gb|AAM97922.1| ubiquitin-specific protease USP32 [Homo sapiens]
gi|162317642|gb|AAI56265.1| Ubiquitin specific peptidase 32 [synthetic construct]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|402899881|ref|XP_003912913.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Papio anubis]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|395845888|ref|XP_003795651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Otolemur
garnettii]
Length = 1604
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570
>gi|74183679|dbj|BAE24461.1| unnamed protein product [Mus musculus]
Length = 124
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 42 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 90
>gi|401625179|gb|EJS43200.1| ubp12p [Saccharomyces arboricola H-6]
Length = 1259
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 31/48 (64%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +DS+
Sbjct: 1073 HYTAYVKNFVDNKWYYFDDSRVTETVPENSVAGSAYLLFYIRRSKDSN 1120
>gi|326931555|ref|XP_003211894.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Meleagris
gallopavo]
Length = 1561
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 11/68 (16%)
Query: 1 MCVRP----------SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYIL 50
+CV P S + GHY Y +PN K W+ +ND + E P + D ++AYIL
Sbjct: 1461 VCVNPIYNLYAISCHSGIMGGGHYVTYAKNPNNK-WYCYNDSSCKELHPDEIDTDSAYIL 1519
Query: 51 FYKKRDED 58
FY+++ D
Sbjct: 1520 FYEQQGVD 1527
>gi|297272741|ref|XP_002808172.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
32-like [Macaca mulatta]
Length = 1535
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1453 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1501
>gi|321478620|gb|EFX89577.1| hypothetical protein DAPPUDRAFT_303219 [Daphnia pulex]
Length = 945
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C G+ GHYTAY +P W+ F+D V + + +AYILFY++R
Sbjct: 782 VCNHHGTGLVGGHYTAYCRNPTDGMWYLFDDAHVSRVKESEIVTTSAYILFYQRR 836
>gi|308799161|ref|XP_003074361.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
gi|116000532|emb|CAL50212.1| putative queuine tRNA-ribosyltransferase (ISS) [Ostreococcus tauri]
Length = 2214
Score = 43.9 bits (102), Expect = 0.011, Method: Composition-based stats.
Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 7/53 (13%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDE--TVLEQRPQDEDFNN--AYILFYKKRD 56
G+ GHYTAYT H WH ++D T +E NN AY++FYK+RD
Sbjct: 1249 GMGGGHYTAYTRHAEEGTWHLYDDSRCTPVESTAA---LNNKAAYVVFYKRRD 1298
>gi|157120281|ref|XP_001653586.1| ubiquitin specific protease [Aedes aegypti]
gi|108883099|gb|EAT47324.1| AAEL001540-PA [Aedes aegypti]
Length = 904
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 4/62 (6%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLE---QRPQDEDFNN-AYILFYKKRD 56
+C + GHYTA +P +W+ F+D+ V + +R Q+E NN AYILFY++R
Sbjct: 551 VCYHQGDTLETGHYTAACKNPYDHQWYKFDDQRVAQVPNERIQEEIVNNEAYILFYQRRK 610
Query: 57 ED 58
D
Sbjct: 611 ID 612
>gi|410915022|ref|XP_003970986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 395
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 27/48 (56%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY HP+ EW+ +ND V + +NAY+LFY+
Sbjct: 334 SGNAMGGHYTAYCRHPSLGEWYSYNDSRVSPVSTANIRSSNAYLLFYE 381
>gi|391331221|ref|XP_003740048.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Metaseiulus occidentalis]
Length = 908
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 31/49 (63%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
+ AGHYTAY + TK+W++F+D V D AY+LFY++R++
Sbjct: 806 LGAGHYTAYAKNKITKKWNHFDDLNVSSISENDIVSKQAYVLFYQRRED 854
>gi|351711884|gb|EHB14803.1| Ubiquitin carboxyl-terminal hydrolase 4 [Heterocephalus glaber]
Length = 964
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + + +W+YF+D V AY+LFY++RDED
Sbjct: 876 AMGVGHYTAYAKNRFSGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDED 926
>gi|322801296|gb|EFZ21983.1| hypothetical protein SINV_10772 [Solenopsis invicta]
Length = 886
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHYTAY HP + EWH +ND V + + AY+LFY+++ S
Sbjct: 836 SGHYTAYCKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQSHSS 884
>gi|403358774|gb|EJY79042.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 847
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN-AYILFYKKRDED 58
++ GHY +Y+ H N ++W+YF+DE V + + +++ + AYILFY K D
Sbjct: 536 LTGGHYYSYSKHRNNQQWYYFDDEVVKKIKNEEKVVSKEAYILFYSKMTVD 586
>gi|326430318|gb|EGD75888.1| hypothetical protein PTSG_11617 [Salpingoeca sp. ATCC 50818]
Length = 1046
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTAY L N + W+ F+D V E P++ ++Y LFY++R E
Sbjct: 932 GLGGGHYTAYCLDTNGR-WYEFDDSYVGEIAPKNIVSTSSYFLFYQRRSE 980
>gi|193700037|ref|XP_001944500.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Acyrthosiphon pisum]
Length = 565
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN-AYILFYK 53
AGHYTA HP T +W++FND +V + +N AYILFY+
Sbjct: 518 AGHYTAMCKHPVTGDWNFFNDSSVSRITSSAKLISNEAYILFYE 561
>gi|213983223|ref|NP_001135522.1| ubiquitin specific peptidase 2 [Xenopus (Silurana) tropicalis]
gi|195540057|gb|AAI67952.1| Unknown (protein for MGC:147993) [Xenopus (Silurana) tropicalis]
Length = 383
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
GHYTAY +P+ EW+ FND V ++AY+LFY E+SGP
Sbjct: 333 GGHYTAYCKNPSNGEWYTFNDSRVTAMSSNQVRSSDAYVLFY---------ELSGP 379
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V G +GHYT+Y +H W++FND +V + + AYILFY +RD
Sbjct: 450 VHHGSGAGSGHYTSYAVHEGG--WYHFNDSSVTQCDEETVAKCKAYILFYVRRD 501
>gi|405962262|gb|EKC27956.1| Ubiquitin carboxyl-terminal hydrolase 2 [Crassostrea gigas]
Length = 368
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 28/49 (57%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S GV +GHYTA HP + EW+ FND V + AY+LFY++
Sbjct: 313 SGGVHSGHYTANCKHPYSGEWNVFNDTRVSPTSASRAVSSEAYLLFYER 361
>gi|380471969|emb|CCF47017.1| ubiquitin carboxyl-terminal hydrolase, partial [Colletotrichum
higginsianum]
Length = 1676
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTAY + +W+ +ND +V + P+ AY+LFY++R E
Sbjct: 1383 GLGGGHYTAYGRNFVDGQWYNYNDTSVSKTSPESVVTRAAYLLFYRRRSE 1432
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 43.9 bits (102), Expect = 0.012, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
S GHYTAY P+T+ W+ FND V + + AY+LFY+++
Sbjct: 287 SGSTVGGHYTAYCKSPHTQTWYMFNDTRVQPVSSNEVKSSQAYVLFYEQQ 336
>gi|427785435|gb|JAA58169.1| Putative ubiquitin carboxyl-terminal hydrolase 20 [Rhipicephalus
pulchellus]
Length = 834
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
GHYT Y L+ +W+ F+D+ V PQ AY+LFY+K E+
Sbjct: 552 GHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNCEAYVLFYRKSSEE 598
>gi|345800049|ref|XP_546616.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Canis lupus
familiaris]
Length = 1076
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV E P+DE + AYILFY+KR+
Sbjct: 624 LQGGHYTAYCRNSLDGQWYSYDDSTV-EPLPEDEVNTRGAYILFYQKRN 671
>gi|327283828|ref|XP_003226642.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Anolis
carolinensis]
Length = 1599
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E P + D ++AYILFY+++ D
Sbjct: 1517 MGGGHYVTYAKNPNDK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGVD 1565
>gi|334350493|ref|XP_001371319.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Monodelphis domestica]
Length = 993
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D+
Sbjct: 910 GLRDGHYTTFARNKDSGQWHYFDDSSVSPVSESQIESKAAYVLFYQRQDK 959
>gi|146169399|ref|XP_001017141.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|146145112|gb|EAR96896.2| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1086
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 24/64 (37%), Positives = 32/64 (50%), Gaps = 8/64 (12%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD--------EDFNNAYILFYKKRDE 57
S G GHY A+ K W+ FND +V +D DFNNAY+LFY+K
Sbjct: 502 SGGAYGGHYYAFIKSFEDKYWYKFNDSSVTYMELEDVIKKAYGGSDFNNAYMLFYRKYSP 561
Query: 58 DSDV 61
+S +
Sbjct: 562 NSSI 565
>gi|355753758|gb|EHH57723.1| Ubiquitin carboxyl-terminal hydrolase 43 [Macaca fascicularis]
Length = 1062
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 603 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 650
>gi|426257123|ref|XP_004022184.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 2 [Ovis
aries]
Length = 802
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 722 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 770
>gi|89269005|emb|CAJ81533.1| ubiquitin specific protease 3 [Xenopus (Silurana) tropicalis]
Length = 522
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY H W +FND TV + AYILFY +R + E
Sbjct: 463 VHHGSGVGSGHYTAYATHKG--RWFHFNDSTVTLTEEETVAKAKAYILFYVERQVPATTE 520
>gi|355568242|gb|EHH24523.1| Ubiquitin carboxyl-terminal hydrolase 43 [Macaca mulatta]
Length = 1140
Score = 43.9 bits (102), Expect = 0.014, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 681 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 728
>gi|119936054|gb|ABM06064.1| ubiquitin specific protease 11 [Bos taurus]
Length = 802
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 722 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 770
>gi|6492124|gb|AAF14189.1|AF106658_1 deubiquitinating enzyme Ubp45 [Rattus norvegicus]
Length = 396
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+ FY+
Sbjct: 341 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLFFYE 388
>gi|74186201|dbj|BAE42896.1| unnamed protein product [Mus musculus]
Length = 296
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 217 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 265
>gi|74139517|dbj|BAE40896.1| unnamed protein product [Mus musculus]
Length = 548
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 469 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 517
>gi|417412856|gb|JAA52787.1| Putative ubiquitin carboxyl-terminal hydrolase 11, partial
[Desmodus rotundus]
Length = 833
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 751 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVSENQIESKAAYVLFYQRQD 799
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY H W +FND TV + AYILFY +R S E
Sbjct: 652 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQARSGSE 709
>gi|426257121|ref|XP_004022183.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 1 [Ovis
aries]
Length = 756
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 676 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 724
>gi|326669890|ref|XP_002663119.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Danio rerio]
Length = 990
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 32/50 (64%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYT+Y + + +W+YF+D V R + + AY+LFY+++D+
Sbjct: 901 GLRDGHYTSYARNKDNGQWYYFDDSKVTYAREEQIVTSAAYLLFYQRQDK 950
>gi|26350395|dbj|BAC38837.1| unnamed protein product [Mus musculus]
Length = 1021
Score = 43.5 bits (101), Expect = 0.014, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 553 LQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRN 600
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY +H W +FND TV + AYILFY +R
Sbjct: 461 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 511
>gi|122692453|ref|NP_001073777.1| ubiquitin carboxyl-terminal hydrolase 11 [Bos taurus]
gi|119936039|gb|ABM06061.1| ubiquitin specific protease 11 [Bos taurus]
gi|296470784|tpg|DAA12899.1| TPA: ubiquitin specific peptidase 11 [Bos taurus]
Length = 756
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 676 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 724
>gi|242003056|ref|XP_002422594.1| DNA double-strand break repair Rad50 ATPase, putative [Pediculus
humanus corporis]
gi|212505395|gb|EEB09856.1| DNA double-strand break repair Rad50 ATPase, putative [Pediculus
humanus corporis]
Length = 870
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 24/44 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
+ GHYTAY P K W+ F+D V E D N AYILFY
Sbjct: 815 MEGGHYTAYCKSPLYKRWYKFDDHEVFEISSNDVKSNAAYILFY 858
>gi|397494598|ref|XP_003818161.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Pan paniscus]
Length = 1115
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 656 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 703
>gi|340503880|gb|EGR30389.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 1095
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 22/48 (45%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ L N EW+ F+D++V + +D ++YILFYKKR
Sbjct: 1050 GLGGGHYTAFAL--NNGEWYCFDDQSVQKIDQKDVCSESSYILFYKKR 1095
>gi|114205510|gb|AAI05614.1| Usp11 protein [Rattus norvegicus]
Length = 728
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 649 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 697
>gi|26327595|dbj|BAC27541.1| unnamed protein product [Mus musculus]
Length = 699
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 620 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 668
>gi|338729116|ref|XP_001917109.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Equus caballus]
Length = 960
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 880 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 928
>gi|123314452|ref|NP_776115.2| ubiquitin carboxyl-terminal hydrolase 43 [Mus musculus]
gi|115311887|sp|Q8BUM9.2|UBP43_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 43; AltName:
Full=Deubiquitinating enzyme 43; AltName: Full=Ubiquitin
thioesterase 43; AltName:
Full=Ubiquitin-specific-processing protease 43
Length = 1132
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRN 711
>gi|195169026|ref|XP_002025329.1| GL13296 [Drosophila persimilis]
gi|194108785|gb|EDW30828.1| GL13296 [Drosophila persimilis]
Length = 820
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKK 54
+ GHYTA HP +++WH FND V + E+F ++AYILFY++
Sbjct: 773 TAGGHYTALCKHPVSRKWHEFNDNIVSDS--VSENFLVSSSAYILFYER 819
>gi|392565614|gb|EIW58791.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 1313
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 28/42 (66%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY L+ T +W++F+D V E RP+ NAY+LFY++R
Sbjct: 1057 YRAYALNHLTGKWYHFDDSYVTESRPEAAVNGNAYLLFYRRR 1098
>gi|332848727|ref|XP_511843.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Pan
troglodytes]
Length = 1123
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711
>gi|198470304|ref|XP_001355290.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
gi|198145386|gb|EAL32347.2| GA13118 [Drosophila pseudoobscura pseudoobscura]
Length = 872
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 5/49 (10%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKK 54
+ GHYTA HP +++WH FND V + E+F ++AYILFY++
Sbjct: 825 TAGGHYTALCKHPVSRKWHEFNDNIVSDS--VSENFLVSSSAYILFYER 871
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY H W +FND TV + AYILFY +R S E
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQARSGSE 518
>gi|402898759|ref|XP_003912384.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Papio anubis]
Length = 1123
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711
>gi|332251166|ref|XP_003274719.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 isoform 1
[Nomascus leucogenys]
Length = 1123
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711
>gi|187282394|ref|NP_001119775.1| ubiquitin carboxyl-terminal hydrolase 43 [Rattus norvegicus]
gi|149052981|gb|EDM04798.1| ubiquitin specific protease 43 (predicted) [Rattus norvegicus]
Length = 1039
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 567 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 614
>gi|119610427|gb|EAW90021.1| hCG57025, isoform CRA_a [Homo sapiens]
Length = 891
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 432 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 479
>gi|395546304|ref|XP_003775029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Sarcophilus harrisii]
Length = 935
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 31/50 (62%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D+
Sbjct: 852 GLRDGHYTTFARNKDSGQWHYFDDSSVSPVSESQIESKAAYVLFYQRQDK 901
>gi|380015099|ref|XP_003691548.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Apis
florea]
Length = 915
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W F+D+ V E + AY+LFYKK
Sbjct: 597 GGHYTCYALNPIVNKWFEFDDQCVTEVSSETVKHCEAYVLFYKK 640
>gi|164663834|ref|NP_663603.3| ubiquitin carboxyl-terminal hydrolase 11 [Mus musculus]
gi|342187159|sp|Q99K46.4|UBP11_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|148668416|gb|EDL00740.1| ubiquitin specific peptidase 11, isoform CRA_a [Mus musculus]
Length = 921
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 842 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 890
>gi|449267415|gb|EMC78360.1| Ubiquitin carboxyl-terminal hydrolase 2, partial [Columba livia]
Length = 450
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY +P + EWH FND V ++AY+LFY+
Sbjct: 400 GGHYTAYCKNPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 442
>gi|3800762|gb|AAC68864.1| ubiquitin specific protease 52 [Gallus gallus]
Length = 465
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
S GHYTAY P + EWH FND V ++AY+LFY
Sbjct: 410 SGATMGGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVPTSDAYLLFY 456
Score = 35.4 bits (80), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETV 34
GHYTAY P + EWH FND V
Sbjct: 2 GGHYTAYCKSPISSEWHSFNDSRV 25
>gi|328778708|ref|XP_001122214.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like, partial
[Apis mellifera]
Length = 867
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 25/44 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYT Y L+P +W F+D+ V E + AY+LFYKK
Sbjct: 549 GGHYTCYALNPIVNKWFEFDDQCVTEVSSETVKHCEAYVLFYKK 592
>gi|431917785|gb|ELK17027.1| Ubiquitin carboxyl-terminal hydrolase 11 [Pteropus alecto]
Length = 881
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 801 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 849
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
+GHYTAY HP + EWH +ND V + + AY+LFY+++ S +
Sbjct: 712 SGHYTAYCKHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQPHSSHL 762
>gi|148745324|gb|AAI42474.1| USP11 protein [Bos taurus]
Length = 910
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 830 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 878
>gi|449489446|ref|XP_002194208.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Taeniopygia
guttata]
Length = 625
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P + EWH FND V ++AY+LFY+
Sbjct: 575 GGHYTAYCKSPVSSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 617
>gi|40788175|emb|CAE47744.2| ubiquitin specific proteinase 43 [Homo sapiens]
Length = 1124
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 665 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 712
>gi|395748559|ref|XP_002827070.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Pongo abelii]
Length = 1106
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 647 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 694
>gi|149042015|gb|EDL95856.1| rCG58374 [Rattus norvegicus]
Length = 471
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY +H W +FND TV + AYILFY +R
Sbjct: 412 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 462
>gi|148612811|ref|NP_694942.3| ubiquitin carboxyl-terminal hydrolase 43 isoform 1 [Homo sapiens]
gi|296452852|sp|Q70EL4.2|UBP43_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 43; AltName:
Full=Deubiquitinating enzyme 43; AltName: Full=Ubiquitin
thioesterase 43; AltName:
Full=Ubiquitin-specific-processing protease 43
gi|219518109|gb|AAI44042.1| Ubiquitin specific peptidase 43 [Homo sapiens]
Length = 1123
Score = 43.5 bits (101), Expect = 0.016, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711
>gi|301764841|ref|XP_002917823.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11-like [Ailuropoda melanoleuca]
Length = 952
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 872 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 920
>gi|348561147|ref|XP_003466374.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 43-like, partial [Cavia porcellus]
Length = 1043
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 584 LQGGHYTAYCRNSLDGQWYSYDDSTVEPIREDEVNTRGAYILFYQKRN 631
>gi|55742515|ref|NP_001006783.1| ubiquitin thiolesterase 3 [Xenopus (Silurana) tropicalis]
gi|49523089|gb|AAH75590.1| ubiquitin specific peptidase 3 [Xenopus (Silurana) tropicalis]
Length = 467
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY H W +FND TV + AYILFY +R + E
Sbjct: 408 VHHGSGVGSGHYTAYATHKG--RWFHFNDSTVTLTEEETVAKAKAYILFYVERQVPATTE 465
>gi|410988427|ref|XP_004000487.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Felis catus]
Length = 951
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 871 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 919
>gi|148238088|ref|NP_001090549.1| ubiquitin thiolesterase 3 [Xenopus laevis]
gi|117558253|gb|AAI26024.1| LOC100036785 protein [Xenopus laevis]
Length = 522
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 29/60 (48%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY H W +FND TV + AYILFY +R + E
Sbjct: 463 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTEEETVAKAKAYILFYVERQVPATTE 520
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 29/57 (50%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W++FND TV AYILFY +R E +
Sbjct: 463 VHHGSGVGSGHYTAYGSHEGC--WYHFNDSTVTLTNEDAVRKAKAYILFYVERAEQA 517
>gi|308081762|ref|NP_001183969.1| ubiquitin carboxyl-terminal hydrolase 11 [Canis lupus familiaris]
Length = 770
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 690 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 738
>gi|363540318|ref|YP_004894636.1| mg585 gene product [Megavirus chiliensis]
gi|350611483|gb|AEQ32927.1| putative ubiquitin carboxyl-terminal hydrolase [Megavirus
chiliensis]
Length = 445
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHY Y L NT +W+ FND+ V + P + AY+LFY ++D
Sbjct: 393 GLDHGHYYTYNLDINTNKWYSFNDKDVNQISPDRVISSTAYLLFYIRQD 441
>gi|345492284|ref|XP_001603431.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Nasonia
vitripennis]
Length = 864
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
GHY Y L+P T +W F+D+ V + AY+LFY+KR ++
Sbjct: 540 GGHYVCYALNPITNQWFEFDDQCVTPVSRETVQNCGAYVLFYRKRSQE 587
>gi|444525919|gb|ELV14207.1| Ubiquitin carboxyl-terminal hydrolase 11 [Tupaia chinensis]
Length = 937
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 857 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 905
>gi|426384146|ref|XP_004058636.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Gorilla
gorilla gorilla]
Length = 1195
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 736 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 783
>gi|354500406|ref|XP_003512291.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus
griseus]
Length = 1060
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 855 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 903
>gi|328353160|emb|CCA39558.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Komagataella pastoris
CBS 7435]
Length = 1202
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYT+Y + +W+YF+D V P+ +AY+LFY++R
Sbjct: 969 GLGGGHYTSYVKNHIDHKWYYFDDARVSAAEPEQAIKGSAYLLFYRRR 1016
>gi|76443681|ref|NP_001008861.2| ubiquitin carboxyl-terminal hydrolase 11 [Rattus norvegicus]
gi|60422774|gb|AAH90333.1| Ubiquitin specific peptidase 11 [Rattus norvegicus]
gi|149044387|gb|EDL97708.1| ubiquitin specific protease 11 [Rattus norvegicus]
Length = 921
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 842 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 890
>gi|355757316|gb|EHH60841.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca fascicularis]
Length = 933
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 853 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 901
>gi|355704756|gb|EHH30681.1| Ubiquitin carboxyl-terminal hydrolase 11 [Macaca mulatta]
Length = 929
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 849 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 897
>gi|354507974|ref|XP_003516029.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like, partial
[Cricetulus griseus]
Length = 340
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 261 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 309
>gi|301771536|ref|XP_002921206.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like
[Ailuropoda melanoleuca]
Length = 1056
Score = 43.5 bits (101), Expect = 0.017, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV E P+DE + AYILFY+KR+
Sbjct: 585 LQGGHYTAYCRNSLDGQWYSYDDSTV-ELLPEDEVNSRGAYILFYQKRN 632
>gi|123455010|ref|XP_001315253.1| hypothetical protein [Trichomonas vaginalis G3]
gi|121897924|gb|EAY03030.1| hypothetical protein TVAG_143300 [Trichomonas vaginalis G3]
Length = 71
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 27/53 (50%)
Query: 2 CVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
V S G+ GHYTA L +T W+ FND + +AYILFY+K
Sbjct: 18 AVFHSGGLGGGHYTAAALDQSTNSWYNFNDSSATPISESSAHSRSAYILFYQK 70
>gi|409040949|gb|EKM50435.1| hypothetical protein PHACADRAFT_129620 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1312
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 27/42 (64%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY L+ ++WH+F+D V RP+ NAY+LFY++R
Sbjct: 1064 YRAYALNSADQQWHHFDDSYVSPARPEAAVNQNAYLLFYRRR 1105
>gi|281343193|gb|EFB18777.1| hypothetical protein PANDA_010043 [Ailuropoda melanoleuca]
Length = 1036
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 32/49 (65%), Gaps = 2/49 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV E P+DE + AYILFY+KR+
Sbjct: 565 LQGGHYTAYCRNSLDGQWYSYDDSTV-ELLPEDEVNSRGAYILFYQKRN 612
>gi|18204471|gb|AAH21474.1| Usp43 protein [Mus musculus]
Length = 826
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 353 LQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRN 400
>gi|350595653|ref|XP_003484153.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Sus scrofa]
Length = 951
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 871 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 919
>gi|332243835|ref|XP_003271077.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Nomascus
leucogenys]
Length = 963
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 883 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 931
>gi|344275820|ref|XP_003409709.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Loxodonta africana]
Length = 961
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD+D
Sbjct: 873 AMGVGHYTAYAKNKLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDD 923
>gi|55846814|gb|AAV67411.1| ubiquitin-specific protease 11 [Macaca fascicularis]
Length = 679
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 607 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 655
>gi|402909992|ref|XP_003917678.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Papio anubis]
Length = 963
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 883 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 931
>gi|109130539|ref|XP_001093504.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 isoform 4
[Macaca mulatta]
Length = 963
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 883 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 931
>gi|260820838|ref|XP_002605741.1| hypothetical protein BRAFLDRAFT_121867 [Branchiostoma floridae]
gi|229291076|gb|EEN61751.1| hypothetical protein BRAFLDRAFT_121867 [Branchiostoma floridae]
Length = 1785
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY +Y +PN K W+ +ND + E P D ++AY+LFY+++ D
Sbjct: 1704 LGGGHYVSYAKNPNGK-WYCYNDSSCKEVHPDQIDTDSAYMLFYERQGMD 1752
>gi|1276912|gb|AAC50450.1| UHX1 protein [Homo sapiens]
gi|119579692|gb|EAW59288.1| ubiquitin specific peptidase 11, isoform CRA_a [Homo sapiens]
gi|194378128|dbj|BAG57814.1| unnamed protein product [Homo sapiens]
gi|1588732|prf||2209322A UHX1 gene
Length = 690
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 610 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 658
>gi|344235361|gb|EGV91464.1| Ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus griseus]
Length = 342
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 263 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 311
>gi|296235360|ref|XP_002807922.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Callithrix jacchus]
Length = 927
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 847 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 895
>gi|254571443|ref|XP_002492831.1| Ubiquitin carboxyl-terminal hydrolase [Komagataella pastoris GS115]
gi|238032629|emb|CAY70652.1| Ubiquitin carboxyl-terminal hydrolase [Komagataella pastoris GS115]
Length = 1146
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYT+Y + +W+YF+D V P+ +AY+LFY++R
Sbjct: 969 GLGGGHYTSYVKNHIDHKWYYFDDARVSAAEPEQAIKGSAYLLFYRRR 1016
>gi|193786257|dbj|BAG51540.1| unnamed protein product [Homo sapiens]
Length = 689
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 609 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 657
>gi|193605897|ref|XP_001946935.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like
[Acyrthosiphon pisum]
Length = 883
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 29/45 (64%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S GHYT Y+L+P ++W+ F+D+ V + + AY+LFYKK
Sbjct: 560 SGGHYTCYSLNPINEQWYEFDDQCVTLVSAEIVRNSEAYVLFYKK 604
>gi|119610428|gb|EAW90022.1| hCG57025, isoform CRA_b [Homo sapiens]
Length = 812
Score = 43.5 bits (101), Expect = 0.018, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 353 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 400
>gi|24234683|ref|NP_004642.2| ubiquitin carboxyl-terminal hydrolase 11 [Homo sapiens]
gi|251757432|sp|P51784.3|UBP11_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 11; AltName:
Full=Deubiquitinating enzyme 11; AltName: Full=Ubiquitin
thioesterase 11; AltName:
Full=Ubiquitin-specific-processing protease 11
gi|187954551|gb|AAI40850.1| Ubiquitin specific peptidase 11 [Homo sapiens]
Length = 963
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 883 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 931
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 2/60 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V GV +GHYTAY H W +FND TV + AYILFY +R E
Sbjct: 581 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTVTLTDEETVGKAKAYILFYVERQAKPGAE 638
>gi|55727816|emb|CAH90661.1| hypothetical protein [Pongo abelii]
Length = 931
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 851 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 899
>gi|380798193|gb|AFE70972.1| ubiquitin carboxyl-terminal hydrolase 11, partial [Macaca mulatta]
Length = 904
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 824 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 872
>gi|148678491|gb|EDL10438.1| ubiquitin specific peptidase 43, isoform CRA_a [Mus musculus]
Length = 1018
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 553 LQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRN 600
>gi|55728896|emb|CAH91186.1| hypothetical protein [Pongo abelii]
Length = 920
Score = 43.1 bits (100), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 840 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 888
>gi|393240437|gb|EJD47963.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 1229
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY +P W++F+D V ++ +NAY+LFY++R
Sbjct: 1002 GLGGGHYRAYAKNPEDDLWYHFDDSHVSRCEAKESVNSNAYLLFYRRR 1049
>gi|326933314|ref|XP_003212751.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Meleagris
gallopavo]
Length = 549
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P + EWH FND V ++AY+LFY+
Sbjct: 499 GGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 541
>gi|444730945|gb|ELW71314.1| Ubiquitin carboxyl-terminal hydrolase 3 [Tupaia chinensis]
Length = 382
Score = 43.1 bits (100), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 30/56 (53%), Gaps = 8/56 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
V GV +GHYTAY H W +FND TV P DE+ AYILFY +R
Sbjct: 323 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TPTDEETVVKAKAYILFYVER 373
>gi|403297385|ref|XP_003939546.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Saimiri
boliviensis boliviensis]
Length = 923
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 843 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 891
>gi|330822529|ref|XP_003291703.1| hypothetical protein DICPUDRAFT_156322 [Dictyostelium purpureum]
gi|325078110|gb|EGC31780.1| hypothetical protein DICPUDRAFT_156322 [Dictyostelium purpureum]
Length = 1463
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 35/57 (61%), Gaps = 3/57 (5%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDFNNAYILFYKKRDEDSDV 61
G+ +GHYTAY + + W ++ND +P + E +NAYILFY+K++ D+D
Sbjct: 1398 GLFSGHYTAYCFNDLQEIWVHYNDSRARIVQPDEVIEESQSNAYILFYQKKEMDNDT 1454
>gi|39795322|gb|AAH63668.1| USP11 protein, partial [Homo sapiens]
Length = 923
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 843 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 891
>gi|119579693|gb|EAW59289.1| ubiquitin specific peptidase 11, isoform CRA_b [Homo sapiens]
gi|168277940|dbj|BAG10948.1| ubiquitin carboxyl-terminal hydrolase 11 [synthetic construct]
Length = 920
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 840 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 888
>gi|38197496|gb|AAH00350.4| USP11 protein, partial [Homo sapiens]
Length = 921
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 841 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 889
>gi|395854375|ref|XP_003799671.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11 [Otolemur
garnettii]
Length = 915
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 835 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 883
>gi|344258660|gb|EGW14764.1| Ubiquitin carboxyl-terminal hydrolase 11 [Cricetulus griseus]
Length = 447
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 368 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 416
>gi|145340853|ref|XP_001415532.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144575755|gb|ABO93824.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 688
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 28/51 (54%), Gaps = 3/51 (5%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN--AYILFYKKRD 56
G+ GHYTAYT H WH + D++ NN AY+LFYK+RD
Sbjct: 597 GMGGGHYTAYTRHAEEGTWHLY-DDSRCTAVDVGAALNNSAAYVLFYKRRD 646
>gi|23503563|dbj|BAC20463.1| deubiquitinating enzyme [Homo sapiens]
Length = 921
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 841 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 889
>gi|344275822|ref|XP_003409710.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Loxodonta africana]
Length = 914
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD+D
Sbjct: 826 AMGVGHYTAYAKNKLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDD 876
>gi|397476700|ref|XP_003809730.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pan paniscus]
Length = 973
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 876 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 924
>gi|297709837|ref|XP_002831614.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 11 [Pongo abelii]
Length = 934
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + +WHYF+D +V Q E AY+LFY+++D
Sbjct: 853 GMRDGHYTTFACFKGSGQWHYFDDNSVTAVNENQIEVLKAAYVLFYQRQD 902
>gi|27374327|gb|AAO01072.1| CG30421-PA [Drosophila virilis]
Length = 1336
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRP-----QDEDFNNAYILFYKKR 55
+C + GHYTA +P + W+ F+D+ V + P QD N AY+LFY++R
Sbjct: 898 VCYHQGDTLETGHYTAACKNPYDRRWYKFDDQRV-SKVPEVDIEQDIINNEAYMLFYQRR 956
Query: 56 DEDSDVEVSG 65
D E SG
Sbjct: 957 SVDPAAECSG 966
>gi|195380195|ref|XP_002048856.1| GJ21270 [Drosophila virilis]
gi|194143653|gb|EDW60049.1| GJ21270 [Drosophila virilis]
Length = 1330
Score = 43.1 bits (100), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRP-----QDEDFNNAYILFYKKR 55
+C + GHYTA +P + W+ F+D+ V + P QD N AY+LFY++R
Sbjct: 892 VCYHQGDTLETGHYTAACKNPYDRRWYKFDDQRV-SKVPEVDIEQDIINNEAYMLFYQRR 950
Query: 56 DEDSDVEVSG 65
D E SG
Sbjct: 951 SVDPAAECSG 960
>gi|148678492|gb|EDL10439.1| ubiquitin specific peptidase 43, isoform CRA_b [Mus musculus]
Length = 1032
Score = 43.1 bits (100), Expect = 0.021, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 567 LQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRN 614
>gi|340368234|ref|XP_003382657.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Amphimedon
queenslandica]
Length = 884
Score = 43.1 bits (100), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTAY + + +W+ F+D V E P+ + +Y+LFY+++ E
Sbjct: 775 GLGGGHYTAYAKNKDNGKWYSFDDSHVSEASPESICSSASYLLFYQRKTE 824
>gi|307211269|gb|EFN87455.1| Ubiquitin carboxyl-terminal hydrolase 2 [Harpegnathos saltator]
Length = 342
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 30/51 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
+GHYTAY HP + EWH +ND V + + AY+LFY+++ S +
Sbjct: 292 SGHYTAYCKHPYSGEWHEYNDSRVSVVSARSVVSSEAYVLFYEQQPHSSHL 342
>gi|194897797|ref|XP_001978724.1| GG19743 [Drosophila erecta]
gi|190650373|gb|EDV47651.1| GG19743 [Drosophila erecta]
Length = 1414
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V E ++ ++AYILFY++
Sbjct: 1367 TAGGHYVALCKHPVSRKWHEFNDNIVSEALSENHLVSSSAYILFYER 1413
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 43.1 bits (100), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R S
Sbjct: 435 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKS 489
>gi|325187626|emb|CCA22162.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 447
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
GHYTA LH K W+ FND V + + YILFY++R E S
Sbjct: 397 GHYTAECLHGVKKAWYSFNDACVSSIAKPSNNSASPYILFYQRRPEQS 444
>gi|170058007|ref|XP_001864733.1| ubiquitin specific protease 2 [Culex quinquefasciatus]
gi|167877243|gb|EDS40626.1| ubiquitin specific protease 2 [Culex quinquefasciatus]
Length = 142
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY A HP +KEW+ FND V E + ++AY+LFY++
Sbjct: 97 AGGHYIAVCKHPISKEWNEFNDNFVSETSERSLVTSSAYVLFYER 141
>gi|10720326|sp|O57429.1|UBP2_CHICK RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|2736064|gb|AAC13729.1| ubiquitin specific protease 41 [Gallus gallus]
Length = 357
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P + EWH FND V ++AY+LFY+
Sbjct: 307 GGHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 349
>gi|325187625|emb|CCA22161.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
gi|325189754|emb|CCA24235.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 451
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
GHYTA LH K W+ FND V + + YILFY++R E S
Sbjct: 401 GHYTAECLHGVKKAWYSFNDACVSSIAKPSNNSASPYILFYQRRPEQS 448
>gi|119610429|gb|EAW90023.1| hCG57025, isoform CRA_c [Homo sapiens]
Length = 551
Score = 43.1 bits (100), Expect = 0.023, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 92 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 139
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 43.1 bits (100), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R S
Sbjct: 431 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKS 485
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 43.1 bits (100), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R S
Sbjct: 461 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKS 515
>gi|395836398|ref|XP_003791143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Otolemur
garnettii]
Length = 1135
Score = 43.1 bits (100), Expect = 0.024, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVSTRGAYILFYQKRN 711
>gi|371943933|gb|AEX61761.1| putative ubiquitin carboxyl-terminal hydrolase [Megavirus courdo7]
gi|425701496|gb|AFX92658.1| putative ubiquitin carboxyl-terminal hydrolase [Megavirus courdo11]
Length = 320
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
+ + G+ GHY Y L NT +W+ FND+ V + P + AY+LFY ++D S+
Sbjct: 263 INHTGGLDHGHYYTYNLDINTNKWYSFNDKDVNQISPDRVISSTAYLLFYIRQDLLSE 320
>gi|344242515|gb|EGV98618.1| Ubiquitin carboxyl-terminal hydrolase 43 [Cricetulus griseus]
Length = 562
Score = 42.7 bits (99), Expect = 0.024, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 217 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 264
>gi|327290078|ref|XP_003229751.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 2-like, partial [Anolis carolinensis]
Length = 666
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY +P + EWH FND V ++AY+LFY+
Sbjct: 616 GGHYTAYCKNPVSGEWHAFNDSRVTPLSASHVRSSDAYLLFYE 658
>gi|170046356|ref|XP_001850734.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167869155|gb|EDS32538.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 638
Score = 42.7 bits (99), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
G S GHYT++ + N W +FND TV E YILFY KRD + V G
Sbjct: 580 GSSCGHYTSFAI--NNGVWMHFNDHTVKEVSSAAVADCKPYILFYIKRDPTNASRVGG 635
>gi|348545019|ref|XP_003459978.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 394
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY +P++ EW+ FND V ++AY+LFY+
Sbjct: 345 GGHYTAYCRNPSSGEWYTFNDSRVTPMSSSQVRSSDAYVLFYE 387
>gi|3386550|gb|AAC28392.1| ubiquitin-specific protease UBP41 [Homo sapiens]
Length = 353
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 25/48 (52%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+ FY+
Sbjct: 298 SGTTMGGHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLHFYE 345
>gi|357155832|ref|XP_003577253.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like
[Brachypodium distachyon]
Length = 879
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDED---FNNAYILFYKKRDEDSDVEVS 64
+ GHYTAY H K W+ F+D +V +R ED + AY+LFY++ DS V+
Sbjct: 813 MGGGHYTAYVFHEGEKRWYDFDDRSV--ERVDKEDSIKTSAAYVLFYRRIQGDSSSLVT 869
>gi|448825561|ref|YP_007418492.1| putative ubiquitin carboxyl-terminal hydrolase [Megavirus lba]
gi|444236746|gb|AGD92516.1| putative ubiquitin carboxyl-terminal hydrolase [Megavirus lba]
Length = 282
Score = 42.7 bits (99), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 33/58 (56%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
+ + G+ GHY Y L NT +W+ FND+ V + P + AY+LFY ++D S+
Sbjct: 225 INHTGGLDHGHYYTYNLDINTNKWYSFNDKDVNQISPDRVISSTAYLLFYIRQDLLSE 282
>gi|308455726|ref|XP_003090371.1| hypothetical protein CRE_06198 [Caenorhabditis remanei]
gi|308264366|gb|EFP08319.1| hypothetical protein CRE_06198 [Caenorhabditis remanei]
Length = 365
Score = 42.7 bits (99), Expect = 0.025, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+++GHYTA H ++ WH ++DETV + + AYILFYK+
Sbjct: 319 LNSGHYTAVASHLKSERWHRYDDETVTPCEKYQVNQSLAYILFYKR 364
>gi|347970708|ref|XP_310382.7| AGAP003821-PA [Anopheles gambiae str. PEST]
gi|333466796|gb|EAA05977.6| AGAP003821-PA [Anopheles gambiae str. PEST]
Length = 1429
Score = 42.7 bits (99), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V GHYT++ H T +W F+D+ V + P+ AY+LFY+K +
Sbjct: 686 VGGGHYTSFAKHDPTGKWFEFDDQLVTQVTPEHVQSCEAYVLFYRKNN 733
>gi|428178162|gb|EKX47038.1| hypothetical protein GUITHDRAFT_106951 [Guillardia theta CCMP2712]
Length = 866
Score = 42.7 bits (99), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 26/45 (57%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
GHYTA+ L P +W+ F+D V + + AY+LFY+ R+
Sbjct: 816 GHYTAFALSPGNDQWYLFDDSRVTKAAKESVCSQAAYVLFYRLRE 860
>gi|116207694|ref|XP_001229656.1| hypothetical protein CHGG_03140 [Chaetomium globosum CBS 148.51]
gi|88183737|gb|EAQ91205.1| hypothetical protein CHGG_03140 [Chaetomium globosum CBS 148.51]
Length = 1550
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN-AYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + EW+ +ND TV +QR + AY+LFY++R S + GP
Sbjct: 1222 GLGGGHYTAFAKNFVDGEWYEYNDATVTKQRDTARVVTSAAYLLFYRRR---SAAPLGGP 1278
>gi|71020237|ref|XP_760349.1| hypothetical protein UM04202.1 [Ustilago maydis 521]
gi|46099973|gb|EAK85206.1| hypothetical protein UM04202.1 [Ustilago maydis 521]
Length = 1427
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ P +W+ F+D +V P+ ++AY+LFY++R
Sbjct: 1270 GLGGGHYTAFAKSPADGKWYEFDDSSVRPVANPEQVKSSSAYLLFYRRR 1318
>gi|348583870|ref|XP_003477695.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cavia
porcellus]
Length = 520
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY +H W +FND TV AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTLTDEDTVGKAKAYILFYVERQAKA 515
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W +FND TV + AYILFY +R
Sbjct: 376 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 426
>gi|4128039|emb|CAA10171.1| TL132 protein [Homo sapiens]
Length = 354
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S GHY Y +PN K W+ +N E P + D ++AYILFY+++ D
Sbjct: 272 LSGGHYVTYAKNPNCK-WYCYNGSICEEHHPDEIDTDSAYILFYEQQRID 320
>gi|299744855|ref|XP_001831310.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
gi|298406320|gb|EAU90473.2| ubiquitin-specific protease [Coprinopsis cinerea okayama7#130]
Length = 1315
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 31/48 (64%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY + T +W++F+D V + ++ +NAY+LFY++R
Sbjct: 1069 GLGGGHYRAYASNHLTGKWYHFDDGYVKQASAEESVNSNAYLLFYRRR 1116
>gi|6322264|ref|NP_012338.1| Ubp12p [Saccharomyces cerevisiae S288c]
gi|731045|sp|P39538.1|UBP12_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|547597|emb|CAA54762.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1008413|emb|CAA89492.1| UBP12 [Saccharomyces cerevisiae]
gi|285812713|tpg|DAA08611.1| TPA: Ubp12p [Saccharomyces cerevisiae S288c]
Length = 1254
Score = 42.7 bits (99), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115
>gi|290771039|emb|CAY80589.2| Ubp12p [Saccharomyces cerevisiae EC1118]
Length = 1254
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115
>gi|156371389|ref|XP_001628746.1| predicted protein [Nematostella vectensis]
gi|156215731|gb|EDO36683.1| predicted protein [Nematostella vectensis]
Length = 1739
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 26/49 (53%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AYT H +W+ F+D V ++ P Y+LFY KR S
Sbjct: 983 SGHYKAYTRHGRNADWYLFDDHLVSKEFPGSSTNKTVYLLFYNKRSGSS 1031
>gi|380803987|gb|AFE73869.1| ubiquitin carboxyl-terminal hydrolase 43, partial [Macaca mulatta]
Length = 228
Score = 42.7 bits (99), Expect = 0.029, Method: Composition-based stats.
Identities = 19/48 (39%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 127 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 174
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W +FND TV + AYILFY +R
Sbjct: 443 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 493
>gi|256271357|gb|EEU06422.1| Ubp12p [Saccharomyces cerevisiae JAY291]
Length = 1254
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115
>gi|392298462|gb|EIW09559.1| Ubp12p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1254
Score = 42.7 bits (99), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115
>gi|242000848|ref|XP_002435067.1| conserved hypothetical protein [Ixodes scapularis]
gi|215498397|gb|EEC07891.1| conserved hypothetical protein [Ixodes scapularis]
Length = 830
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+GHYT Y L+ +W+ F+D+ V PQ AY+LFY+K E+
Sbjct: 556 AGSGHYTTYALNHLNDQWYEFDDQYVTSVEPQVVQNCEAYVLFYRKSSEE 605
>gi|242015222|ref|XP_002428271.1| ubiquitin specific protease, putative [Pediculus humanus corporis]
gi|212512845|gb|EEB15533.1| ubiquitin specific protease, putative [Pediculus humanus corporis]
Length = 954
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 2/56 (3%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKKR 55
+C + + GHYTAY +P +W+ F D+T +E P+ N+AYILFY+KR
Sbjct: 722 ICNHHGQDLQGGHYTAYCRNPFDCQWYSF-DDTKVEPVPETNLITNSAYILFYQKR 776
>gi|151944937|gb|EDN63192.1| ubiquitin carboxyl-terminal hydrolase [Saccharomyces cerevisiae
YJM789]
gi|190409319|gb|EDV12584.1| ubiquitin carboxyl-terminal hydrolase 12 [Saccharomyces cerevisiae
RM11-1a]
Length = 1254
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115
>gi|323354353|gb|EGA86192.1| Ubp12p [Saccharomyces cerevisiae VL3]
Length = 1257
Score = 42.7 bits (99), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115
>gi|365760061|gb|EHN01808.1| Ubp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1104
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 919 HYTAYVKNFADSKWYYFDDSRVTETVPENSISGSAYLLFYIRRAKDGN 966
>gi|444510625|gb|ELV09647.1| Ubiquitin carboxyl-terminal hydrolase 4 [Tupaia chinensis]
Length = 898
Score = 42.7 bits (99), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+ GHYTAY + W+YF+D V AY+LFY++RDE++
Sbjct: 812 AMGVGHYTAYAKNKLNGRWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDEET 863
>gi|195130331|ref|XP_002009605.1| GI15450 [Drosophila mojavensis]
gi|193908055|gb|EDW06922.1| GI15450 [Drosophila mojavensis]
Length = 1158
Score = 42.4 bits (98), Expect = 0.033, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 31/46 (67%), Gaps = 1/46 (2%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND +V + P++ ++AYILFY++
Sbjct: 1112 AGGHYVAICKHPVSRKWHEFNDNSVSDAIPENCLVSSSAYILFYER 1157
>gi|296216400|ref|XP_002754520.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Callithrix
jacchus]
Length = 597
Score = 42.4 bits (98), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 26/45 (57%), Gaps = 2/45 (4%)
Query: 11 AGHYTAYT--LHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY+ P T EWH FND +V ++AY+LFY+
Sbjct: 545 GGHYTAYSNCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 589
>gi|410910732|ref|XP_003968844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Takifugu
rubripes]
Length = 114
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY +P++ EW+ FND V ++AY+LFY+
Sbjct: 65 GGHYTAYCRNPSSGEWYTFNDSRVTPMSSSQVRSSDAYVLFYE 107
>gi|426244688|ref|XP_004016152.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 1 [Ovis
aries]
gi|426244690|ref|XP_004016153.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 isoform 2 [Ovis
aries]
Length = 606
Score = 42.4 bits (98), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 598
>gi|254580861|ref|XP_002496416.1| ZYRO0C17908p [Zygosaccharomyces rouxii]
gi|186703867|emb|CAQ43553.1| Ubiquitin carboxyl-terminal hydrolase 12 [Zygosaccharomyces rouxii]
gi|238939307|emb|CAR27483.1| ZYRO0C17908p [Zygosaccharomyces rouxii]
Length = 1204
Score = 42.4 bits (98), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
HYTAY + + +W+YF+D V E P+ ++AY+LFY +R D
Sbjct: 986 HYTAYAKNVDDSKWYYFDDSRVTETTPERGIASSAYLLFYVRRTAD 1031
>gi|395517798|ref|XP_003763060.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like, partial
[Sarcophilus harrisii]
Length = 265
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYT + + ++ +WHYF+D +V + AY+LFY ++D+
Sbjct: 182 GLRDGHYTTFARNKDSGQWHYFDDSSVSPVSESQIESKAAYVLFYHRQDK 231
>gi|343425268|emb|CBQ68804.1| related to UBP12-ubiquitin C-terminal hydrolase [Sporisorium
reilianum SRZ2]
Length = 1405
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ P +W+ F+D +V P+ ++AY+LFY++R
Sbjct: 1253 GLGGGHYTAFAKSPADGKWYEFDDSSVRPVANPETVKSSSAYLLFYRRR 1301
>gi|311264080|ref|XP_003129987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 1
[Sus scrofa]
Length = 606
Score = 42.4 bits (98), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 598
>gi|366998069|ref|XP_003683771.1| hypothetical protein TPHA_0A02540 [Tetrapisispora phaffii CBS 4417]
gi|357522066|emb|CCE61337.1| hypothetical protein TPHA_0A02540 [Tetrapisispora phaffii CBS 4417]
Length = 1286
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
HYTAY + +W+YF+D V E P+ +AY+LFY +R D +V
Sbjct: 1068 HYTAYIKNLIDNKWYYFDDSRVSETVPERSVAGSAYLLFYMRRTSDGNV 1116
>gi|256072742|ref|XP_002572693.1| ubiquitin-specific peptidase 4 (C19 family) [Schistosoma mansoni]
Length = 945
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTA+ L+ +T W++F+D + E P + AY+L Y +R
Sbjct: 832 LGGGHYTAFALNAHTNRWYFFDDSSTRECDPSKIVTSAAYVLVYVRR 878
>gi|395331753|gb|EJF64133.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 1301
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 18/42 (42%), Positives = 28/42 (66%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY L+ T +W++F+D V RP+ +NAY+LFY++R
Sbjct: 1063 YRAYALNHATGKWYHFDDSYVTPARPEQAVNSNAYLLFYRRR 1104
>gi|365764875|gb|EHN06393.1| Ubp12p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1254
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETVPENSIAGSAYLLFYIRRHKDGN 1115
>gi|195429786|ref|XP_002062938.1| GK21665 [Drosophila willistoni]
gi|194159023|gb|EDW73924.1| GK21665 [Drosophila willistoni]
Length = 1309
Score = 42.4 bits (98), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D ED N AY+LFY++R
Sbjct: 876 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDAIEEDIINNEAYMLFYQRR 934
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 935 SVDAG-ECSG 943
>gi|114053169|ref|NP_001039728.1| ubiquitin carboxyl-terminal hydrolase 2 [Bos taurus]
gi|122135912|sp|Q2KHV7.1|UBP2_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 2; AltName:
Full=41 kDa ubiquitin-specific protease; AltName:
Full=Deubiquitinating enzyme 2; AltName: Full=Ubiquitin
thioesterase 2; AltName:
Full=Ubiquitin-specific-processing protease 2
gi|86438174|gb|AAI12867.1| Ubiquitin specific peptidase 2 [Bos taurus]
gi|296480118|tpg|DAA22233.1| TPA: ubiquitin specific peptidase 2 [Bos taurus]
gi|440904915|gb|ELR55367.1| Ubiquitin carboxyl-terminal hydrolase 2 [Bos grunniens mutus]
Length = 606
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 25/43 (58%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 556 GGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 598
>gi|195392830|ref|XP_002055057.1| GJ19166 [Drosophila virilis]
gi|194149567|gb|EDW65258.1| GJ19166 [Drosophila virilis]
Length = 938
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP + +WH FND +V + P++ ++AYILFY++
Sbjct: 891 TAGGHYVALCKHPVSHKWHEFNDNSVSDAIPENCLVSSSAYILFYER 937
>gi|195058982|ref|XP_001995537.1| GH17708 [Drosophila grimshawi]
gi|193896323|gb|EDV95189.1| GH17708 [Drosophila grimshawi]
Length = 847
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP + +WH FND +V + P++ ++AYILFY++
Sbjct: 800 TAGGHYVAICKHPVSHKWHEFNDNSVSDSIPENCLVSSSAYILFYER 846
>gi|156847043|ref|XP_001646407.1| hypothetical protein Kpol_2001p54 [Vanderwaltozyma polyspora DSM
70294]
gi|156117083|gb|EDO18549.1| hypothetical protein Kpol_2001p54 [Vanderwaltozyma polyspora DSM
70294]
Length = 1223
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
HYTAY + K+W+YF+D V E P+ +AY+LFY +R +++
Sbjct: 1015 HYTAYVKNFVDKKWYYFDDSRVTETVPERSIAGSAYLLFYMRRSDNT 1061
>gi|326927732|ref|XP_003210044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Meleagris
gallopavo]
Length = 917
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
+ GHYTAY + +W+YF+D +V AY+LFY++R+ + V S P
Sbjct: 849 AMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRNSEEHVAPSPP 907
>gi|194757191|ref|XP_001960848.1| GF13568 [Drosophila ananassae]
gi|190622146|gb|EDV37670.1| GF13568 [Drosophila ananassae]
Length = 1153
Score = 42.4 bits (98), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D ED N AY+LFY++R
Sbjct: 736 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDAIEEDIINNEAYMLFYQRR 794
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 795 SVDAG-ECSG 803
>gi|449501186|ref|XP_004161301.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Cucumis
sativus]
Length = 949
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%), Gaps = 8/53 (15%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDE 57
G+ AGHYTAY LH +W+ F+D+ V+ P ED + AY+LFYK+ E
Sbjct: 901 GMGAGHYTAYVLHGG--KWYDFDDDRVI---PVSEDVVKSSAAYVLFYKRIAE 948
>gi|340505013|gb|EGR31392.1| ubiquitin specific peptidase 8, putative [Ichthyophthirius
multifiliis]
Length = 399
Score = 42.4 bits (98), Expect = 0.040, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYT L+ ++W+ +ND+ VL Q+ E N AYILFYK++
Sbjct: 355 AGGHYTTMALNFLNQKWYEYNDQNVL-QKKNIEVKNQAYILFYKRK 399
>gi|123455008|ref|XP_001315252.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121897923|gb|EAY03029.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 614
Score = 42.4 bits (98), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S G+ GHYTA L +T W+ FND + +AYILFY+K
Sbjct: 565 SGGLGGGHYTAAALDQSTNSWYNFNDSSATPISESSAHSRSAYILFYQK 613
>gi|313237726|emb|CBY12865.1| unnamed protein product [Oikopleura dioica]
Length = 388
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 3/52 (5%)
Query: 8 GVSAGHYTAYTLHPNTKE---WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GHYTAY HP+ K+ W +D V + RP +N Y+LFYK ++
Sbjct: 282 SMSFGHYTAYVKHPDKKDESKWRLADDSHVRDVRPASVVSDNGYLLFYKLKE 333
>gi|444712140|gb|ELW53071.1| Ubiquitin carboxyl-terminal hydrolase 43 [Tupaia chinensis]
Length = 754
Score = 42.0 bits (97), Expect = 0.041, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTA+ + +W+ ++D TV R + + AYILFY+KR+
Sbjct: 358 LQGGHYTAFCRNSLDGQWYSYDDSTVESLREDEVNTRGAYILFYQKRN 405
>gi|226487492|emb|CAX74616.1| ubiquitin thiolesterase [Schistosoma japonicum]
gi|226487494|emb|CAX74617.1| ubiquitin thiolesterase [Schistosoma japonicum]
Length = 919
Score = 42.0 bits (97), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTA+ L+ T W++F+D + E P ++AY+L Y +R
Sbjct: 805 LGGGHYTAFALNAQTNLWYFFDDSSTRECDPSKIVTSSAYVLVYVRR 851
>gi|76157148|gb|AAX28163.2| SJCHGC05197 protein [Schistosoma japonicum]
Length = 202
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTA+ L+ T W++F+D + E P ++AY+L Y +R
Sbjct: 88 LGGGHYTAFALNAQTNLWYFFDDSSTRECDPSKIVTSSAYVLVYVRR 134
>gi|226487496|emb|CAX74618.1| ubiquitin thiolesterase [Schistosoma japonicum]
Length = 933
Score = 42.0 bits (97), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTA+ L+ T W++F+D + E P ++AY+L Y +R
Sbjct: 819 LGGGHYTAFALNAQTNLWYFFDDSSTRECDPSKIVTSSAYVLVYVRR 865
>gi|406868122|gb|EKD21159.1| ubiquitin carboxyl-terminal hydrolase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1506
Score = 42.0 bits (97), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + + ++W+ +ND +V + ++AY+LFY++R SDV + GP
Sbjct: 1215 GLGGGHYTAFAKNYDDQQWYEYNDSSVTKVTDLSRIVSSSAYLLFYRRR---SDVPLGGP 1271
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 42.0 bits (97), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W++FND TV AYILFY +R
Sbjct: 463 VHHGSGVGSGHYTAYGSHEG--RWYHFNDSTVTLTNEDTVRKAKAYILFYVER 513
>gi|195998045|ref|XP_002108891.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
gi|190589667|gb|EDV29689.1| hypothetical protein TRIADDRAFT_19410 [Trichoplax adhaerens]
Length = 333
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
+ GHYTA+ +P KEW+ F+D V D ++AYILFY
Sbjct: 275 LEGGHYTAFCQNPYAKEWYKFDDHIVSRISSNDVKTSSAYILFY 318
>gi|145532775|ref|XP_001452143.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419820|emb|CAK84746.1| unnamed protein product [Paramecium tetraurelia]
Length = 251
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 29/56 (51%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEV 63
G+ GHYTAY + +W+ F+D V E +AY+LFYK+R E +
Sbjct: 189 GMGGGHYTAYAKNHFNGQWYNFDDSQVSELEEDQVVSKSAYVLFYKRRSEQEQTQT 244
>gi|367027774|ref|XP_003663171.1| hypothetical protein MYCTH_2304715 [Myceliophthora thermophila ATCC
42464]
gi|347010440|gb|AEO57926.1| hypothetical protein MYCTH_2304715 [Myceliophthora thermophila ATCC
42464]
Length = 1536
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN-AYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + EW+ +ND +V +Q+ + AY+LFY++R S V + GP
Sbjct: 1198 GLGGGHYTAFAKNFIDGEWYEYNDSSVSKQKDTSRVVTSAAYLLFYRRR---SKVPLGGP 1254
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 42.0 bits (97), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W +FND TV + AYILFY +R
Sbjct: 376 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVER 426
>gi|443898438|dbj|GAC75773.1| ubiquitin C-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 1407
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ P +W+ F+D +V P+ +AY+LFY++R
Sbjct: 1257 GLGGGHYTAFAKSPADGKWYEFDDSSVRPVANPESVKSASAYLLFYRRR 1305
>gi|417405449|gb|JAA49435.1| Putative ubiquitin carboxyl-terminal hydrolase 4 [Desmodus
rotundus]
Length = 963
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + ++W+YF+D V AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNKLNRKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 925
>gi|345480921|ref|XP_001606702.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like isoform 1
[Nasonia vitripennis]
Length = 979
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AYILFY+KR
Sbjct: 744 ICNHHGQDLQGGHYTAFCRNPYDSQWYSFDDTRVEAVNDTNLVTNAAYILFYQKR 798
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 417 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 471
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 42.0 bits (97), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W +FND TV + AYILFY +R
Sbjct: 417 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVER 467
>gi|47230637|emb|CAF99830.1| unnamed protein product [Tetraodon nigroviridis]
Length = 157
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 30/53 (56%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V + ++ GHYTA L T WH+F+D V E + + ++AY+L Y ++
Sbjct: 93 VNHTGNLNMGHYTALCLSTVTGTWHHFDDAAVREVQDESVQSSSAYMLLYSRK 145
>gi|345480919|ref|XP_003424246.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like isoform 2
[Nasonia vitripennis]
Length = 963
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AYILFY+KR
Sbjct: 744 ICNHHGQDLQGGHYTAFCRNPYDSQWYSFDDTRVEAVNDTNLVTNAAYILFYQKR 798
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTVTVTDEETVVKAKAYILFYVERQAKA 515
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 372 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 426
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 439 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 493
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 42.0 bits (97), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 432 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 486
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 372 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 426
>gi|351698262|gb|EHB01181.1| Ubiquitin carboxyl-terminal hydrolase 3 [Heterocephalus glaber]
Length = 537
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY +H W +FND TV + AYILFY
Sbjct: 478 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTLTDEETVGKAKAYILFY 525
>gi|335295001|ref|XP_003357373.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like isoform 2
[Sus scrofa]
Length = 396
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 341 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 388
>gi|443918707|gb|ELU39101.1| ubiquitin-specific protease [Rhizoctonia solani AG-1 IA]
Length = 275
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%), Gaps = 5/52 (9%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
G+ GHY AY + + EW++F+D V + NAY+LFY++R DS
Sbjct: 98 GLGGGHYRAYAKNLSDGEWYHFDDSYVSKSSNA-----NAYLLFYRRRSSDS 144
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 431 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 485
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 439 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 493
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 515
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 515
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 515
>gi|38048719|gb|AAR10262.1| similar to Drosophila melanogaster CG14619, partial [Drosophila
yakuba]
Length = 110
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V E ++ ++AYILFY++
Sbjct: 64 AGGHYVALCKHPVSRKWHEFNDNIVSEALSENHLVSSSAYILFYER 109
>gi|405966260|gb|EKC31567.1| Ubiquitin carboxyl-terminal hydrolase 20 [Crassostrea gigas]
Length = 914
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
GHYTAY L+ +W+ F+D+ V E AY+LFY+KR++D
Sbjct: 560 AGGGHYTAYCLNYLNDQWYEFDDQYVTEVEVGQVINCEAYVLFYRKRNDD 609
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 42.0 bits (97), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 439 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 493
>gi|444722556|gb|ELW63246.1| Ubiquitin carboxyl-terminal hydrolase 2 [Tupaia chinensis]
Length = 395
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 26/48 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND +V ++AY+LFY+
Sbjct: 340 SGTTMGGHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 387
>gi|291393673|ref|XP_002713400.1| PREDICTED: ubiquitin specific protease 4 [Oryctolagus cuniculus]
Length = 859
Score = 42.0 bits (97), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V + AY+LFY++RD++
Sbjct: 771 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVLFYQRRDDE 821
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W +FND TV + AYILFY +R
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVER 511
>gi|432895001|ref|XP_004076037.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Oryzias
latipes]
Length = 1581
Score = 42.0 bits (97), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E ++ D ++AYILFY+++ D
Sbjct: 1499 MGGGHYVTYAKNPNRK-WYCYNDSSCKEVHSEEIDTDSAYILFYEQQGVD 1547
>gi|432092259|gb|ELK24883.1| Ubiquitin carboxyl-terminal hydrolase 3 [Myotis davidii]
Length = 449
Score = 42.0 bits (97), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 26/53 (49%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W +FND TV AYILFY +R
Sbjct: 390 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTEEDTVVKAKAYILFYAER 440
>gi|440794108|gb|ELR15279.1| hypothetical protein ACA1_220180 [Acanthamoeba castellanii str. Neff]
Length = 1296
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTA+ L+ W++FND + + AY+LFYK R+
Sbjct: 999 GLGGGHYTAFGLNARDNRWYHFNDGSTTAVSDDAVRTSAAYVLFYKLRE 1047
>gi|194221320|ref|XP_001498012.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Equus
caballus]
Length = 963
Score = 42.0 bits (97), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V + AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVLFYQRRDDE 925
>gi|145545853|ref|XP_001458610.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426431|emb|CAK91213.1| unnamed protein product [Paramecium tetraurelia]
Length = 503
Score = 41.6 bits (96), Expect = 0.054, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S +++GHYTAY + + W++FND V + Q E N+AY+LFY K
Sbjct: 357 SGTLTSGHYTAYGKNRDDLHWYHFNDSLVTPVQ-QPESLNDAYLLFYFK 404
>gi|349604082|gb|AEP99732.1| Ubiquitin carboxyl-terminal hydrolase 4-like protein, partial
[Equus caballus]
Length = 431
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V + AY+LFY++RD++
Sbjct: 343 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVLFYQRRDDE 393
>gi|296419248|ref|XP_002839229.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635239|emb|CAZ83420.1| unnamed protein product [Tuber melanosporum]
Length = 578
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
+ V G + GHY AYT H +EW +D+ + + + + AY+LFYK+RD++
Sbjct: 476 VVVHQGTGANFGHYVAYTKH--QEEWWLLDDDRITKVPSESVAKSKAYLLFYKRRDDEIS 533
Query: 61 VEVS 64
++
Sbjct: 534 CAIA 537
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV + AYILFY +R +
Sbjct: 292 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKA 346
>gi|338714892|ref|XP_003363165.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Equus caballus]
Length = 916
Score = 41.6 bits (96), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V + AY+LFY++RD++
Sbjct: 828 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEEQIVTKAAYVLFYQRRDDE 878
>gi|194763591|ref|XP_001963916.1| GF21001 [Drosophila ananassae]
gi|190618841|gb|EDV34365.1| GF21001 [Drosophila ananassae]
Length = 1296
Score = 41.6 bits (96), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 30/49 (61%), Gaps = 5/49 (10%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKK 54
+ GHY A HP +++WH FND V + E+F ++AYILFY++
Sbjct: 1249 TAGGHYVALCKHPVSRKWHEFNDNIVSDA--LSENFLVSSSAYILFYER 1295
>gi|298712288|emb|CBJ26739.1| similar to ubiquitin specific peptidase 15 [Ectocarpus siliculosus]
Length = 1360
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 27/50 (54%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
S + AGHYTA + K+W+ FND V P + Y+LFY++R
Sbjct: 1296 SGSLRAGHYTAIAQNSEDKKWYSFNDSHVSPTTPDKGPSSEPYVLFYRRR 1345
>gi|195356149|ref|XP_002044543.1| GM11729 [Drosophila sechellia]
gi|194132165|gb|EDW53792.1| GM11729 [Drosophila sechellia]
Length = 1022
Score = 41.6 bits (96), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V + ++ ++AYILFY++
Sbjct: 975 TAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 1021
>gi|297716038|ref|XP_002834356.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 6-like, partial
[Pongo abelii]
Length = 311
Score = 41.6 bits (96), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+S HY Y +PN K W+ +ND E P + D ++AYILFY+++ D
Sbjct: 229 LSGVHYVTYAKNPNCK-WYCYNDSICEELHPDEIDTDSAYILFYEQQGID 277
>gi|195482373|ref|XP_002102021.1| GE17938 [Drosophila yakuba]
gi|194189545|gb|EDX03129.1| GE17938 [Drosophila yakuba]
Length = 1409
Score = 41.6 bits (96), Expect = 0.058, Method: Composition-based stats.
Identities = 19/46 (41%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V E ++ ++AYILFY++
Sbjct: 1363 AGGHYVALCKHPVSRKWHEFNDNIVSEALSENHLVSSSAYILFYER 1408
>gi|341893270|gb|EGT49205.1| hypothetical protein CAEBREN_03371 [Caenorhabditis brenneri]
Length = 863
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 30/46 (65%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+++GHYTA H + +WH ++DETV + + + AYILFYK+
Sbjct: 817 LNSGHYTAVASHLKSDKWHRYDDETVRACEKYEINPSLAYILFYKR 862
>gi|13529494|gb|AAH05470.1| Ubiquitin specific peptidase 11 [Mus musculus]
Length = 699
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYT + + ++ +WHY +D +V + AY+LFY+++D
Sbjct: 620 GMRDGHYTTFACNKDSGQWHYLDDNSVSPVNENQIESKAAYVLFYQRQD 668
>gi|335309063|ref|XP_003361478.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Sus
scrofa]
Length = 84
Score = 41.6 bits (96), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 27/55 (49%), Gaps = 2/55 (3%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ V GV +GHYTAY H W +FND TV AYILFY +R
Sbjct: 23 VVVHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEDTVVKAKAYILFYVER 75
>gi|213624427|gb|AAI71081.1| hypothetical protein LOC548982 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 41.6 bits (96), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ +E
Sbjct: 619 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAEAYVLFYRKASEEAQIE 672
>gi|281338350|gb|EFB13934.1| hypothetical protein PANDA_009352 [Ailuropoda melanoleuca]
Length = 962
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 874 AMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 924
>gi|432959676|ref|XP_004086360.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like [Oryzias
latipes]
Length = 1014
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYT+Y + + +W+YF+D V N AY+LFY ++D+
Sbjct: 920 GLRDGHYTSYAKNKDNAQWYYFDDSKVTYASEDQIMTNAAYVLFYHRQDK 969
>gi|365982984|ref|XP_003668325.1| hypothetical protein NDAI_0B00480 [Naumovozyma dairenensis CBS 421]
gi|343767092|emb|CCD23082.1| hypothetical protein NDAI_0B00480 [Naumovozyma dairenensis CBS 421]
Length = 1253
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
HYTAY + N +W+YF+D V P+ +AY+LFY +R+ +V
Sbjct: 1045 HYTAYAKNANDNKWYYFDDSRVSVTAPEKSIAGSAYLLFYVRRNSHENV 1093
>gi|157108246|ref|XP_001650143.1| hypothetical protein AaeL_AAEL004980 [Aedes aegypti]
gi|108879378|gb|EAT43603.1| AAEL004980-PA [Aedes aegypti]
Length = 626
Score = 41.6 bits (96), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G S GHYT+Y + N W +FND +V E YILFY KRD
Sbjct: 556 GSSCGHYTSYAI--NNGVWMHFNDHSVKEVSSSAVAECKPYILFYIKRD 602
>gi|170086692|ref|XP_001874569.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164649769|gb|EDR14010.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1273
Score = 41.6 bits (96), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 28/48 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY AY + T +W++F+D V D NAY+LFY++R
Sbjct: 1055 GLGGGHYRAYASNHLTGKWYHFDDSYVSPASAIDAVNANAYLLFYRRR 1102
>gi|351701613|gb|EHB04532.1| Ubiquitin carboxyl-terminal hydrolase 43 [Heterocephalus glaber]
Length = 1130
Score = 41.6 bits (96), Expect = 0.063, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV + + + AYILFY+KR+
Sbjct: 679 LQGGHYTAYCRNSLDGQWYSYDDSTVEPIQEDEVNTRGAYILFYQKRN 726
>gi|301770377|ref|XP_002920614.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Ailuropoda
melanoleuca]
Length = 1000
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 912 AMGVGHYTAYAKNKVNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 962
>gi|432857080|ref|XP_004068528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Oryzias
latipes]
Length = 998
Score = 41.6 bits (96), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
HYTAY + +W+YF+D +V AY+LFY++RDED+
Sbjct: 928 HYTAYAKNKLDGKWYYFDDSSVSSATDDQIVTKAAYVLFYQRRDEDA 974
>gi|19920418|ref|NP_608462.1| CG14619, isoform A [Drosophila melanogaster]
gi|24643789|ref|NP_728453.1| CG14619, isoform D [Drosophila melanogaster]
gi|24643791|ref|NP_728454.1| CG14619, isoform E [Drosophila melanogaster]
gi|17862942|gb|AAL39948.1| SD04280p [Drosophila melanogaster]
gi|22832690|gb|AAF50952.2| CG14619, isoform A [Drosophila melanogaster]
gi|22832691|gb|AAN09564.1| CG14619, isoform D [Drosophila melanogaster]
gi|22832692|gb|AAN09565.1| CG14619, isoform E [Drosophila melanogaster]
Length = 856
Score = 41.6 bits (96), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V + ++ ++AYILFY++
Sbjct: 809 TAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 855
>gi|56693219|ref|NP_001008574.1| ubiquitin carboxyl-terminal hydrolase 2 [Danio rerio]
gi|56269271|gb|AAH86963.1| Zgc:92134 [Danio rerio]
Length = 391
Score = 41.6 bits (96), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 25/44 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYTAY +P EW+ +ND V ++AY+LFY++
Sbjct: 345 GGHYTAYCCNPENGEWYTYNDSRVTPMSASQVRSSDAYVLFYER 388
>gi|349579011|dbj|GAA24174.1| K7_Ubp12p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1254
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 30/48 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
HYTAY + +W+YF+D V E P++ +AY+LFY +R +D +
Sbjct: 1068 HYTAYVKNFADNKWYYFDDSRVTETAPENCIAGSAYLLFYIRRHKDGN 1115
>gi|170028244|ref|XP_001842006.1| ubiquitin carboxyl-terminal hydrolase 43 [Culex quinquefasciatus]
gi|167871831|gb|EDS35214.1| ubiquitin carboxyl-terminal hydrolase 43 [Culex quinquefasciatus]
Length = 1083
Score = 41.6 bits (96), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 34/62 (54%), Gaps = 4/62 (6%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLE---QRPQDEDFNN-AYILFYKKRD 56
+C + GHYTA +P W+ F+D+ V + R Q+E NN AYILFY++R
Sbjct: 718 VCYHQGDTLETGHYTAACKNPYDANWYKFDDQRVNQVSSDRIQEEIVNNEAYILFYQRRK 777
Query: 57 ED 58
D
Sbjct: 778 ID 779
>gi|123405801|ref|XP_001302681.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121883993|gb|EAX89751.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 521
Score = 41.6 bits (96), Expect = 0.069, Method: Composition-based stats.
Identities = 19/42 (45%), Positives = 23/42 (54%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHY + TL +W+ FND RP D NAYILFY+
Sbjct: 479 GHYISVTLDQEQNKWYLFNDMKASPARPGDAFGPNAYILFYQ 520
>gi|270012100|gb|EFA08548.1| hypothetical protein TcasGA2_TC006203 [Tribolium castaneum]
Length = 933
Score = 41.6 bits (96), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF------NNAYILFYKK 54
+C + GHYTA +P +W+ ++D V Q +D N+AYILFY++
Sbjct: 666 ICYHHGSDIETGHYTAACKNPYDNQWYLYDDAKVTNLSKQTDDISALLVNNSAYILFYQR 725
Query: 55 RD 56
R+
Sbjct: 726 RN 727
>gi|91088095|ref|XP_969130.1| PREDICTED: similar to ubiquitin carboxyl-terminal hydrolase 43
[Tribolium castaneum]
Length = 859
Score = 41.2 bits (95), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%), Gaps = 6/62 (9%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF------NNAYILFYKK 54
+C + GHYTA +P +W+ ++D V Q +D N+AYILFY++
Sbjct: 645 ICYHHGSDIETGHYTAACKNPYDNQWYLYDDAKVTNLSKQTDDISALLVNNSAYILFYQR 704
Query: 55 RD 56
R+
Sbjct: 705 RN 706
>gi|345559926|gb|EGX43057.1| hypothetical protein AOL_s00215g843 [Arthrobotrys oligospora ATCC
24927]
Length = 1829
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 30/51 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
G+ GHYTA + K+W+YF+D + + + + AY++FY++R D
Sbjct: 1183 GLGGGHYTANARNWVDKKWYYFDDSSARQTPASSINGSAAYLVFYRRRSSD 1233
>gi|320588013|gb|EFX00488.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
Length = 1698
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + +W+ +ND +V + P +AY+LFY++R SDV + GP
Sbjct: 1395 GLGGGHYTAFARNFIDGQWYEYNDSSVSKVSDPNRVVSASAYLLFYRRR---SDVPLGGP 1451
>gi|195568052|ref|XP_002107569.1| GD17542 [Drosophila simulans]
gi|194204979|gb|EDX18555.1| GD17542 [Drosophila simulans]
Length = 398
Score = 41.2 bits (95), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V + ++ ++AYILFY++
Sbjct: 350 STAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 397
>gi|403275388|ref|XP_003929431.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Saimiri
boliviensis boliviensis]
Length = 1147
Score = 41.2 bits (95), Expect = 0.073, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV + + + AYILFY+KR+
Sbjct: 688 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLQEDEINTRGAYILFYQKRN 735
>gi|158293588|ref|XP_314931.4| AGAP008805-PA [Anopheles gambiae str. PEST]
gi|157016781|gb|EAA10095.4| AGAP008805-PA [Anopheles gambiae str. PEST]
Length = 634
Score = 41.2 bits (95), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V G S GHYT++ + N W +FND TV E YILFY KRD
Sbjct: 552 VHHGNGSSCGHYTSFAI--NNGVWMHFNDHTVKEVSSTAVAECKPYILFYIKRD 603
>gi|254914123|gb|ACT83760.1| AT03982p [Drosophila melanogaster]
Length = 240
Score = 41.2 bits (95), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V + ++ ++AYILFY++
Sbjct: 192 STAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 239
>gi|426370762|ref|XP_004052330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2 [Gorilla gorilla
gorilla]
Length = 355
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 26/48 (54%), Gaps = 7/48 (14%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY P T EWH FND + + ++AY+LFY+
Sbjct: 307 SGTTMGGHYTAYCRSPGTGEWHTFNDSSQVRT-------SDAYLLFYE 347
>gi|27374272|gb|AAO01028.1| CG30421-PA [Drosophila pseudoobscura]
Length = 1298
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 858 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 916
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 917 SVDAG-ECSG 925
>gi|74211276|dbj|BAE37701.1| unnamed protein product [Mus musculus]
Length = 582
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 495 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 545
>gi|390462942|ref|XP_002806841.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 43 [Callithrix jacchus]
Length = 1123
Score = 41.2 bits (95), Expect = 0.076, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 29/48 (60%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV + + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLQEDEINTRGAYILFYQKRN 711
>gi|363756064|ref|XP_003648248.1| hypothetical protein Ecym_8140 [Eremothecium cymbalariae DBVPG#7215]
gi|356891448|gb|AET41431.1| Hypothetical protein Ecym_8140 [Eremothecium cymbalariae DBVPG#7215]
Length = 1264
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 28/45 (62%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
HYTAY + +W+YF+D V E P+ +AY+LFY++R E
Sbjct: 1043 HYTAYVKNFLDNKWYYFDDSRVNETVPERSIAGSAYLLFYRRRTE 1087
>gi|242084278|ref|XP_002442564.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
gi|241943257|gb|EES16402.1| hypothetical protein SORBIDRAFT_08g022020 [Sorghum bicolor]
Length = 890
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+ GHYTAY H K W+ F+D V + AY+LFY++ EDS
Sbjct: 827 LGGGHYTAYVYHEGKKGWYDFDDRHVGPITEDSIKTSAAYVLFYRRIQEDS 877
>gi|195383962|ref|XP_002050694.1| GJ20067 [Drosophila virilis]
gi|194145491|gb|EDW61887.1| GJ20067 [Drosophila virilis]
Length = 923
Score = 41.2 bits (95), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK--------RDEDSD 60
V GHYT Y + W+ F+D+ V+E P AY+LFY+K R+E +
Sbjct: 434 VGGGHYTCYARNALNGRWYEFDDQLVMEVTPDVVQNCQAYVLFYQKHNPQMKMVREEAIN 493
Query: 61 VEVSGP 66
+ S P
Sbjct: 494 LSTSNP 499
>gi|74190269|dbj|BAE37232.1| unnamed protein product [Mus musculus]
Length = 199
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 112 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 162
>gi|410919483|ref|XP_003973214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Takifugu
rubripes]
Length = 1001
Score = 41.2 bits (95), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
HYTAY + +W+YF+D +V AY+LFY++RDE+S
Sbjct: 931 HYTAYGKNKADGKWYYFDDSSVSSASEDQIVTKAAYVLFYQRRDEES 977
>gi|414877602|tpg|DAA54733.1| TPA: hypothetical protein ZEAMMB73_341521 [Zea mays]
Length = 888
Score = 41.2 bits (95), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+ GHYTAY H K W+ F+D V + AY+LFY++ EDS
Sbjct: 825 LGGGHYTAYVYHEGKKGWYDFDDRHVGPITEDSIKTSAAYVLFYRRIQEDS 875
>gi|195586519|ref|XP_002083021.1| GD11892 [Drosophila simulans]
gi|194195030|gb|EDX08606.1| GD11892 [Drosophila simulans]
Length = 1209
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 798 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 856
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 857 SVDAG-ECSG 865
>gi|349603576|gb|AEP99377.1| Ubiquitin carboxyl-terminal hydrolase-like protein, partial [Equus
caballus]
Length = 301
Score = 41.2 bits (95), Expect = 0.079, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 110 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 162
>gi|195353248|ref|XP_002043117.1| GM11894 [Drosophila sechellia]
gi|194127205|gb|EDW49248.1| GM11894 [Drosophila sechellia]
Length = 1179
Score = 41.2 bits (95), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 768 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 826
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 827 SVDAG-ECSG 835
>gi|2580459|gb|AAB82339.1| putative [Mus musculus]
Length = 962
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 925
>gi|74142121|dbj|BAE41120.1| unnamed protein product [Mus musculus]
Length = 962
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 925
>gi|198459017|ref|XP_001361226.2| GA15834 [Drosophila pseudoobscura pseudoobscura]
gi|198136542|gb|EAL25804.2| GA15834 [Drosophila pseudoobscura pseudoobscura]
Length = 1290
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 856 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 914
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 915 SVDAG-ECSG 923
>gi|156365847|ref|XP_001626854.1| predicted protein [Nematostella vectensis]
gi|156213745|gb|EDO34754.1| predicted protein [Nematostella vectensis]
Length = 632
Score = 41.2 bits (95), Expect = 0.080, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 31/49 (63%), Gaps = 2/49 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
+S GHYTA+ +P +W Y D+T +EQ P ++ AY+LFY +R+
Sbjct: 565 MSGGHYTAHCRNPTDGQW-YLYDDTRVEQVPVNQVTTQAAYLLFYARRN 612
>gi|164519045|ref|NP_035808.2| ubiquitin carboxyl-terminal hydrolase 4 [Mus musculus]
gi|342187118|sp|P35123.3|UBP4_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein
gi|26354498|dbj|BAC40877.1| unnamed protein product [Mus musculus]
gi|74140411|dbj|BAE42357.1| unnamed protein product [Mus musculus]
gi|74146936|dbj|BAE25450.1| unnamed protein product [Mus musculus]
gi|74199576|dbj|BAE41468.1| unnamed protein product [Mus musculus]
gi|74211684|dbj|BAE29198.1| unnamed protein product [Mus musculus]
gi|148689335|gb|EDL21282.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b [Mus
musculus]
Length = 962
Score = 41.2 bits (95), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 925
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 41.2 bits (95), Expect = 0.081, Method: Composition-based stats.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 665 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 712
>gi|195155071|ref|XP_002018430.1| GL16769 [Drosophila persimilis]
gi|194114226|gb|EDW36269.1| GL16769 [Drosophila persimilis]
Length = 1292
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 856 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 914
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 915 SVDAG-ECSG 923
>gi|2655204|gb|AAC53587.1| ubiquitin-specific protease [Mus musculus]
Length = 962
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 925
>gi|157125302|ref|XP_001654280.1| ubiquitin specific protease [Aedes aegypti]
gi|108873655|gb|EAT37880.1| AAEL010184-PA [Aedes aegypti]
Length = 1801
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLE--QRPQDEDFNNAYILFYKKRDEDSD 60
S ++ GHY +Y +PN W+ +ND + E RP+ D + AY+LFY++RD D D
Sbjct: 1714 SGMLNGGHYISYAANPN-GSWYCYNDSSCREIPTRPKI-DPSTAYLLFYERRDLDYD 1768
>gi|42542785|gb|AAH66180.1| Usp4 protein, partial [Mus musculus]
gi|45219741|gb|AAH66865.1| Usp4 protein, partial [Mus musculus]
Length = 961
Score = 41.2 bits (95), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 874 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 924
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 27/53 (50%), Gaps = 2/53 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
V GV +GHYTAY H W++FND TV AYILFY +R
Sbjct: 387 VHHGSGVGSGHYTAYGSHEAC--WYHFNDSTVTLTNEDTVRKAKAYILFYVER 437
>gi|24762724|ref|NP_611959.2| CG30421 [Drosophila melanogaster]
gi|21645075|gb|AAF47260.2| CG30421 [Drosophila melanogaster]
gi|221307667|gb|ACM16709.1| FI05488p [Drosophila melanogaster]
Length = 1272
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 862 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 920
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 921 SVDAG-ECSG 929
>gi|24643795|ref|NP_728456.1| CG14619, isoform B [Drosophila melanogaster]
gi|22832694|gb|AAN09567.1| CG14619, isoform B [Drosophila melanogaster]
Length = 337
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 1/48 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V + ++ ++AYILFY++
Sbjct: 289 STAGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 336
>gi|355728062|gb|AES09403.1| ubiquitin specific peptidase 4 [Mustela putorius furo]
Length = 684
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 597 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 647
>gi|16768276|gb|AAL28357.1| GH27809p [Drosophila melanogaster]
Length = 1272
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 862 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 920
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 921 SVDAG-ECSG 929
>gi|340503315|gb|EGR29915.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 752
Score = 41.2 bits (95), Expect = 0.083, Method: Composition-based stats.
Identities = 21/48 (43%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYTAY L N W+ F+D +V + +D +YILFYKK+
Sbjct: 707 GIGGGHYTAYCL--NEDNWYCFDDSSVNKVNKKDICTEASYILFYKKK 752
>gi|15030172|gb|AAH11341.1| Usp4 protein [Mus musculus]
Length = 915
Score = 41.2 bits (95), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 828 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 878
>gi|148689334|gb|EDL21281.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a [Mus
musculus]
Length = 915
Score = 41.2 bits (95), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 828 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 878
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 41.2 bits (95), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV DED AYILFY +R +
Sbjct: 433 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVLKAKAYILFYVERQAKA 487
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV DED AYILFY +R +
Sbjct: 444 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVERQAKA 498
>gi|195489778|ref|XP_002092881.1| GE14437 [Drosophila yakuba]
gi|194178982|gb|EDW92593.1| GE14437 [Drosophila yakuba]
Length = 1286
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 873 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 931
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 932 SVDAG-ECSG 940
>gi|194886675|ref|XP_001976660.1| GG23000 [Drosophila erecta]
gi|190659847|gb|EDV57060.1| GG23000 [Drosophila erecta]
Length = 1267
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 40/70 (57%), Gaps = 7/70 (10%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDF--NNAYILFYKKR 55
+C + GHYTA +P ++W+ F+D+ V + P+D +D N AY+LFY++R
Sbjct: 857 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 915
Query: 56 DEDSDVEVSG 65
D+ E SG
Sbjct: 916 SVDAG-ECSG 924
>gi|348532572|ref|XP_003453780.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Oreochromis niloticus]
Length = 403
Score = 41.2 bits (95), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
S GHYTAY +P EW+ +ND V +NAY+LFY+
Sbjct: 342 SGNALGGHYTAYCKNPALGEWYSYNDSRVSPMSSSQVRSSNAYVLFYE 389
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 41.2 bits (95), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVGKAKAYILFY 508
>gi|401881283|gb|EJT45585.1| ubiquitin carboxyl-terminal hydrolase 12 [Trichosporon asahii var.
asahii CBS 2479]
Length = 1328
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTA+ + + +W+ ++D V + + AY+LFYK+R E
Sbjct: 1119 GLGGGHYTAFCRNKDDHQWYNYDDSRVSKASAEGVQSRAAYLLFYKRRTE 1168
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 41.2 bits (95), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV DED AYILFY +R +
Sbjct: 417 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVERQAKA 471
>gi|406696920|gb|EKD00191.1| ubiquitin carboxyl-terminal hydrolase 12 [Trichosporon asahii var.
asahii CBS 8904]
Length = 1329
Score = 41.2 bits (95), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTA+ + + +W+ ++D V + + AY+LFYK+R E
Sbjct: 1120 GLGGGHYTAFCRNKDDHQWYNYDDSRVSKASAEGVQSRAAYLLFYKRRTE 1169
>gi|407929035|gb|EKG21874.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 1470
Score = 41.2 bits (95), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 31/51 (60%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
G+ GHYTA + +W+ +ND V ++ P ++AY+LFY++R E+
Sbjct: 1217 GLGGGHYTAVAKNFYDGQWYDYNDSMVSKKSPSSIVNSSAYLLFYRRRTEN 1267
>gi|403291354|ref|XP_003936760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Saimiri
boliviensis boliviensis]
Length = 941
Score = 40.8 bits (94), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 854 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 904
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 40.8 bits (94), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
V GV +GHYTAY H W +FND TV DED AYILFY +R
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVER 511
>gi|202070754|ref|NP_001128484.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Rattus
norvegicus]
gi|302595968|sp|B2GUZ1.1|UBP4_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|149018536|gb|EDL77177.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_a [Rattus norvegicus]
gi|183985839|gb|AAI66460.1| Usp4 protein [Rattus norvegicus]
Length = 961
Score = 40.8 bits (94), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 874 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 924
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 40.8 bits (94), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV DED AYILFY +R +
Sbjct: 417 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVERQAKA 471
>gi|324503928|gb|ADY41696.1| Ubiquitin carboxyl-terminal hydrolase 8 [Ascaris suum]
Length = 939
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 31/49 (63%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S +++GHYT+ + +TKEW +++DE+V NAYIL++KK
Sbjct: 888 SGRLNSGHYTSVMHNEDTKEWLFYDDESVTPINADSICSKNAYILYFKK 936
>gi|145528153|ref|XP_001449876.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124417465|emb|CAK82479.1| unnamed protein product [Paramecium tetraurelia]
Length = 113
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
G+ GHYTAY + +TK+W+ F+D V E AY+L Y+ R ++S
Sbjct: 43 GLGGGHYTAYAKNKHTKKWYNFDDSHVAETSESQVVTKAAYVLCYQLRTDES 94
>gi|348532251|ref|XP_003453620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32 [Oreochromis
niloticus]
Length = 1585
Score = 40.8 bits (94), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY Y +PN K W+ +ND + E ++ D ++AYILFY+++
Sbjct: 1503 LGGGHYVTYAKNPNGK-WYCYNDSSCKEVHSEEIDTDSAYILFYEQQ 1548
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 40.8 bits (94), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
V GV +GHYTAY H W +FND TV DED AYILFY +R
Sbjct: 413 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVER 463
>gi|431913420|gb|ELK15095.1| Ubiquitin carboxyl-terminal hydrolase 4 [Pteropus alecto]
Length = 964
Score = 40.8 bits (94), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|410951167|ref|XP_003982271.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Felis
catus]
Length = 917
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 879
>gi|312372464|gb|EFR20418.1| hypothetical protein AND_20136 [Anopheles darlingi]
Length = 1884
Score = 40.8 bits (94), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLE--QRPQDEDFNNAYILFYKKRDED 58
S ++ GHY +Y +PN W+ +ND + E RP+ D + AY+LFY++RD D
Sbjct: 1797 SGMLNGGHYISYAANPN-GSWYCYNDSSCCEIPTRPKI-DPSTAYLLFYERRDLD 1849
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV DED AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVERQAKA 515
>gi|157824037|ref|NP_001099563.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Rattus
norvegicus]
gi|149018537|gb|EDL77178.1| similar to Ubiquitin carboxyl-terminal hydrolase 4 (Ubiquitin
thiolesterase 4) (Ubiquitin-specific processing protease
4) (Deubiquitinating enzyme 4) (Ubiquitous nuclear
protein), isoform CRA_b [Rattus norvegicus]
Length = 914
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D +V AY+LFY++RD++
Sbjct: 827 AMGVGHYTAYAKNRLNGKWYYFDDSSVSLASEDQIVTKAAYVLFYQRRDDE 877
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 40.8 bits (94), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
V GV +GHYTAY H W +FND TV DED AYILFY +R
Sbjct: 461 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVER 511
>gi|410951165|ref|XP_003982270.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Felis
catus]
Length = 964
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|345787400|ref|XP_003432923.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Canis
lupus familiaris]
Length = 917
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 879
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
V GV +GHYTAY H W +FND TV DED AYILFY +R
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVER 511
>gi|195439036|ref|XP_002067437.1| GK16418 [Drosophila willistoni]
gi|194163522|gb|EDW78423.1| GK16418 [Drosophila willistoni]
Length = 1396
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/48 (41%), Positives = 30/48 (62%), Gaps = 5/48 (10%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKK 54
+ GHY A HP++++WH FND V + E+F +AYILFY++
Sbjct: 1350 AGGHYVALCKHPDSRKWHEFNDNIVSDT--LSENFLVSASAYILFYER 1395
>gi|123446292|ref|XP_001311898.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121893725|gb|EAX98968.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1201
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 4/62 (6%)
Query: 8 GVSAGHYTAYT----LHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEV 63
+ GHYTA+ L NT EW+ FND + E +AY+LFY++ DED V
Sbjct: 984 SLGGGHYTAHAVVSPLDKNTGEWYSFNDSSASESTAASAHNASAYVLFYQRMDEDCPVIE 1043
Query: 64 SG 65
G
Sbjct: 1044 GG 1045
>gi|348684164|gb|EGZ23979.1| hypothetical protein PHYSODRAFT_484586 [Phytophthora sojae]
Length = 423
Score = 40.8 bits (94), Expect = 0.10, Method: Composition-based stats.
Identities = 20/52 (38%), Positives = 33/52 (63%), Gaps = 3/52 (5%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE--DFNNAYILFYKKRD 56
+G+S+GHYTA+ P+ W + D+TV+ +DE + AY+LFY ++D
Sbjct: 358 RGISSGHYTAHIRRPDETCW-WLADDTVVTPLSEDEVSPSSTAYLLFYVRQD 408
>gi|224066024|ref|XP_002192515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Taeniopygia
guttata]
Length = 904
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 30/59 (50%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
+ GHYTAY + +W+YF+D +V AY+LFY++R+ + S P
Sbjct: 836 AMGVGHYTAYAKNKVNNKWYYFDDSSVSVASEDQIVTKAAYVLFYERRNSEEHSAPSAP 894
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 40.8 bits (94), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 29/56 (51%), Gaps = 8/56 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
V GV +GHYTAY H W +FND TV DED AYILFY +R
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTV---TLTDEDTVVKAKAYILFYVER 511
>gi|350578536|ref|XP_003121514.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Sus
scrofa]
Length = 182
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+ V GV +GHYTAY H W +FND TV AYILFY +R +
Sbjct: 121 VVVHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEDTVVKAKAYILFYVERQAKA 177
>gi|311268397|ref|XP_003132035.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Sus scrofa]
Length = 1123
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV + + AYILFY+KR+
Sbjct: 666 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLLEDEVNTRGAYILFYQKRN 713
>gi|197099624|ref|NP_001125307.1| ubiquitin carboxyl-terminal hydrolase 4 [Pongo abelii]
gi|75055118|sp|Q5RCD3.1|UBP4_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|55727639|emb|CAH90574.1| hypothetical protein [Pongo abelii]
Length = 963
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|345787398|ref|XP_533829.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Canis
lupus familiaris]
Length = 964
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|312372780|gb|EFR20666.1| hypothetical protein AND_19714 [Anopheles darlingi]
Length = 608
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V G S GHYT++ + N W +FND TV E YILFY KRD
Sbjct: 539 VHHGNGSSCGHYTSFAI--NNGVWMHFNDHTVKEVSSAAVAECKPYILFYIKRD 590
>gi|296225191|ref|XP_002758385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Callithrix jacchus]
Length = 963
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|402860133|ref|XP_003894489.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Papio anubis]
Length = 921
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 834 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 884
>gi|342187290|ref|NP_001230117.1| ubiquitin specific peptidase 4 (proto-oncogene) [Sus scrofa]
Length = 963
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|334323386|ref|XP_003340388.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Monodelphis
domestica]
Length = 1100
Score = 40.8 bits (94), Expect = 0.11, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV ++ AYILFY+KR+
Sbjct: 621 MQGGHYTAYCRNSLDGQWYSYDDSTVEPVSEEEVSTRGAYILFYQKRN 668
>gi|355746701|gb|EHH51315.1| hypothetical protein EGM_10667, partial [Macaca fascicularis]
Length = 889
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 802 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 852
>gi|332215938|ref|XP_003257098.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Nomascus leucogenys]
Length = 963
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|332215940|ref|XP_003257099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Nomascus leucogenys]
Length = 916
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 879
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 31/49 (63%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
GHYT+Y L+ +++W+ F+D+ V E Q + AY+LFY+ +++
Sbjct: 558 AGGGHYTSYALNHLSQQWYEFDDQYVTEVDLQQVENCEAYVLFYRSKND 606
>gi|50304791|ref|XP_452351.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641484|emb|CAH01202.1| KLLA0C03476p [Kluyveromyces lactis]
Length = 1252
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 28/43 (65%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY + +W+YF+D V E P++ +AY+LFY++R
Sbjct: 1008 HYTAYCRNFIDGKWYYFDDSRVNEVSPENSIAGSAYLLFYRRR 1050
>gi|354476435|ref|XP_003500430.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Cricetulus
griseus]
Length = 967
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 879 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 929
>gi|344252839|gb|EGW08943.1| Ubiquitin carboxyl-terminal hydrolase 4 [Cricetulus griseus]
Length = 940
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 852 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 902
>gi|62898145|dbj|BAD97012.1| ubiquitin specific protease, proto-oncogene isoform a variant [Homo
sapiens]
Length = 963
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|302308992|ref|NP_986174.2| AFR627Cp [Ashbya gossypii ATCC 10895]
gi|299790892|gb|AAS53998.2| AFR627Cp [Ashbya gossypii ATCC 10895]
gi|374109406|gb|AEY98312.1| FAFR627Cp [Ashbya gossypii FDAG1]
Length = 1287
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 29/45 (64%), Gaps = 1/45 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
HYTAY + + K W+YF+D V E P+ +AY+LFY++R E
Sbjct: 1068 HYTAYVKNIDGK-WYYFDDSRVSETLPERSIAGSAYLLFYRRRVE 1111
>gi|410036953|ref|XP_003950154.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Pan
troglodytes]
Length = 907
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 820 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 870
>gi|114586840|ref|XP_001163407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 7 [Pan
troglodytes]
gi|397495143|ref|XP_003818420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Pan
paniscus]
gi|410227906|gb|JAA11172.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259862|gb|JAA17897.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289714|gb|JAA23457.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353789|gb|JAA43498.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 915
Score = 40.8 bits (94), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 828 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 878
>gi|40795665|ref|NP_003354.2| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Homo sapiens]
gi|116242839|sp|Q13107.3|UBP4_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4; AltName:
Full=Ubiquitous nuclear protein homolog
gi|2656141|gb|AAC27355.1| UnpEL [Homo sapiens]
gi|115527981|gb|AAI25131.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
gi|119585375|gb|EAW64971.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|119585376|gb|EAW64972.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_d
[Homo sapiens]
gi|158257022|dbj|BAF84484.1| unnamed protein product [Homo sapiens]
Length = 963
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|2459395|gb|AAB72237.1| ubiquitin protease [Homo sapiens]
Length = 963
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|114586836|ref|XP_001163445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 8 [Pan
troglodytes]
gi|397495141|ref|XP_003818419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Pan
paniscus]
gi|410227908|gb|JAA11173.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410259864|gb|JAA17898.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410289716|gb|JAA23458.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
gi|410353791|gb|JAA43499.1| ubiquitin specific peptidase 4 (proto-oncogene) [Pan troglodytes]
Length = 962
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 875 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 925
>gi|355559641|gb|EHH16369.1| hypothetical protein EGK_11640 [Macaca mulatta]
gi|380788769|gb|AFE66260.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|383409701|gb|AFH28064.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
gi|384942170|gb|AFI34690.1| ubiquitin carboxyl-terminal hydrolase 4 isoform a [Macaca mulatta]
Length = 963
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|297285790|ref|XP_002802844.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Macaca
mulatta]
Length = 935
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 848 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 898
>gi|40795667|ref|NP_955475.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Homo sapiens]
gi|2656143|gb|AAC27356.1| UnpES [Homo sapiens]
gi|119585373|gb|EAW64969.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
gi|119585377|gb|EAW64973.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_b
[Homo sapiens]
Length = 916
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 879
>gi|383409703|gb|AFH28065.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
gi|384942172|gb|AFI34691.1| ubiquitin carboxyl-terminal hydrolase 4 isoform b [Macaca mulatta]
Length = 916
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 879
>gi|343961659|dbj|BAK62419.1| ubiquitin carboxyl-terminal hydrolase 4 [Pan troglodytes]
Length = 907
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 820 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 870
>gi|126335813|ref|XP_001367947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1
[Monodelphis domestica]
Length = 965
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 877 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 927
>gi|119585372|gb|EAW64968.1| ubiquitin specific peptidase 4 (proto-oncogene), isoform CRA_a
[Homo sapiens]
Length = 819
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 732 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 782
>gi|47210494|emb|CAF91634.1| unnamed protein product [Tetraodon nigroviridis]
Length = 842
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
S+GHY AY + W+ F+D V E AY+LFYKK +ED+
Sbjct: 620 ASSGHYIAYCRNDGNNLWYEFDDHRVTEVSESCVQNAEAYVLFYKKSNEDA 670
>gi|339247041|ref|XP_003375154.1| ubiquitin carboxyl- hydrolase 33 [Trichinella spiralis]
gi|316971533|gb|EFV55291.1| ubiquitin carboxyl- hydrolase 33 [Trichinella spiralis]
Length = 483
Score = 40.8 bits (94), Expect = 0.12, Method: Composition-based stats.
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHY +Y ++ + W+ F+DETV P + AY+LFY+K
Sbjct: 183 GGHYVSYCMNHSNYRWYLFDDETVTAVDPCTVENVEAYVLFYEK 226
>gi|62897009|dbj|BAD96445.1| ubiquitin specific protease, proto-oncogene isoform b variant [Homo
sapiens]
Length = 916
Score = 40.8 bits (94), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 879
>gi|115529049|gb|AAI25132.1| Ubiquitin specific peptidase 4 (proto-oncogene) [Homo sapiens]
Length = 963
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 926
>gi|126335815|ref|XP_001367983.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2
[Monodelphis domestica]
Length = 920
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 832 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 882
>gi|47169480|tpe|CAE48377.1| TPA: ubiquitin specific protease 11 [Rattus norvegicus]
Length = 700
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 29/49 (59%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GH T + + ++ +WHYF+D +V + AY+LFY+++D
Sbjct: 621 GMRDGHCTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 669
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 35/55 (63%), Gaps = 4/55 (7%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETV-LEQRPQDEDFNNAYILFYKKRDEDSDV 61
G ++GHY A+T PN + W+ ND+ V L+ RP D +AY+LFY RDE S +
Sbjct: 364 GPNSGHYYAFTKGPNGR-WYEMNDDAVSLQTRPP-LDLKSAYMLFY-LRDEASAL 415
>gi|327533544|pdb|2Y6E|A Chain A, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533545|pdb|2Y6E|B Chain B, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533546|pdb|2Y6E|C Chain C, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533547|pdb|2Y6E|D Chain D, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533548|pdb|2Y6E|E Chain E, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
gi|327533549|pdb|2Y6E|F Chain F, Ubiquitin Specific Protease 4 Is Inhibited By Its
Ubiquitin- Like Domain
Length = 367
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 311 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 361
>gi|195435249|ref|XP_002065614.1| GK14576 [Drosophila willistoni]
gi|194161699|gb|EDW76600.1| GK14576 [Drosophila willistoni]
Length = 318
Score = 40.4 bits (93), Expect = 0.12, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
GHY A HP + +WH FND V + P+ + +AYILFY++
Sbjct: 272 GGHYVALCKHPISHKWHEFNDNIVSDALPESFLVSPSAYILFYER 316
>gi|154415957|ref|XP_001581002.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121915225|gb|EAY20016.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 877
Score = 40.4 bits (93), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 12 GHYTAYTLHPNTK--EWHYFNDETVLEQRPQDEDFNNAYILFYKKRD---EDSDVEVSGP 66
GH TA+ + PN K +W FND +V + + N AY+LFY++ D ED+ V V+ P
Sbjct: 720 GHCTAHAIVPNGKGRDWFSFNDSSVKKVIQSNAHTNAAYVLFYERIDNEAEDNAVLVAKP 779
>gi|24643793|ref|NP_728455.1| CG14619, isoform C [Drosophila melanogaster]
gi|386764876|ref|NP_001245799.1| CG14619, isoform F [Drosophila melanogaster]
gi|386764878|ref|NP_001245800.1| CG14619, isoform G [Drosophila melanogaster]
gi|22832693|gb|AAN09566.1| CG14619, isoform C [Drosophila melanogaster]
gi|28317311|gb|AAO39652.1| AT11044p [Drosophila melanogaster]
gi|262331596|gb|ACY46087.1| MIP13335p [Drosophila melanogaster]
gi|383293538|gb|AFH07511.1| CG14619, isoform F [Drosophila melanogaster]
gi|383293539|gb|AFH07512.1| CG14619, isoform G [Drosophila melanogaster]
Length = 938
Score = 40.4 bits (93), Expect = 0.13, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKK 54
+ GHY A HP +++WH FND V + ++ ++AYILFY++
Sbjct: 892 AGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 937
>gi|348507904|ref|XP_003441495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Oreochromis niloticus]
Length = 997
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 28/47 (59%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
HYTAY + +W+YF+D +V AY+LFY++RDE+S
Sbjct: 927 HYTAYGKNKVDGKWYYFDDSSVSSATEDQIVTKAAYVLFYQRRDEES 973
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 2/57 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V GV +GHYTA+ H W +FND TV + AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAFATHEG--RWFHFNDSTVTLTDEETVLKAKAYILFYVERQAKA 515
>gi|326674232|ref|XP_686236.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Danio
rerio]
Length = 1572
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY Y +PN K W+ +ND + E + D ++AYILFY+++ D
Sbjct: 1490 MGGGHYVTYAKNPNEK-WYCYNDSSCKEVHSDEIDTDSAYILFYEQQGVD 1538
>gi|395516315|ref|XP_003762336.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 4 [Sarcophilus harrisii]
Length = 989
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 901 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 951
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY P T EW+ +ND V ++AY+LFY+
Sbjct: 349 GGHYTAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYE 391
>gi|327286811|ref|XP_003228123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Anolis
carolinensis]
Length = 533
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 463 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTVTLTDEETVLRAKAYILFY 510
>gi|443699630|gb|ELT99007.1| hypothetical protein CAPTEDRAFT_129894 [Capitella teleta]
Length = 1508
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY Y H N K W+ +ND + E D NNAYI+F++ R
Sbjct: 1427 MGGGHYVTYAKHHNEK-WYLYNDSSCKEIPETQVDTNNAYIMFFESR 1472
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 40.4 bits (93), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 30/60 (50%), Gaps = 8/60 (13%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDS 59
V GV +GHYTAY H W +FND TV DED AYILFY +R +
Sbjct: 461 VHHGSGVGSGHYTAYAKHEG--RWFHFNDSTV---TLADEDTVVKAKAYILFYVERQAKA 515
>gi|312373083|gb|EFR20906.1| hypothetical protein AND_18322 [Anopheles darlingi]
Length = 1429
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDET---VLEQRPQDEDFNN-AYILFYKKR 55
+C + GHYTA +P +W+ F+D+ V E R +E NN AY+LFY++R
Sbjct: 670 VCYHQGDTLETGHYTAACKNPYDGQWYRFDDQRVTHVAEDRVDEEIINNEAYLLFYQRR 728
>gi|426238849|ref|XP_004023437.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 43-like [Ovis aries]
Length = 1073
Score = 40.4 bits (93), Expect = 0.14, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV + + AYILFY+KR+
Sbjct: 599 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLLEDEVNTRGAYILFYQKRN 646
>gi|326430459|gb|EGD76029.1| hypothetical protein PTSG_00738 [Salpingoeca sp. ATCC 50818]
Length = 1663
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 32/58 (55%), Gaps = 3/58 (5%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQD---EDFNNAYILFYKKRDEDSDVEVSG 65
AGHYTA H ++ +W+ F+DE V D +D + A ILF+ ++D D E G
Sbjct: 1603 AGHYTASVRHASSGKWYRFDDEHVTPLPSVDAAVKDRSAASILFFVRKDGDGHGEADG 1660
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 439 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|432911380|ref|XP_004078651.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Oryzias
latipes]
Length = 911
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
S+GHY AY + + W+ F+D++V E AY+LFYKK + D+
Sbjct: 638 ASSGHYIAYCRNDSNNLWYEFDDQSVTEVSESCVQNAEAYVLFYKKSNGDT 688
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 31/60 (51%), Gaps = 5/60 (8%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
V G+ +GHYTAY H +W++FND TV + AYILFY E SD E
Sbjct: 465 VHHGSGIGSGHYTAYGRHEG--QWYHFNDSTVTLVSEEAVLKAKAYILFY---TEHSDRE 519
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 417 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%), Gaps = 2/54 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V G +GHYTA+ + N ++W +FND+TV YILFY +R+
Sbjct: 509 VHHGSGAGSGHYTAFAI--NEEQWFHFNDQTVRATDSAAVASCKPYILFYIRRE 560
>gi|307168913|gb|EFN61813.1| Ubiquitin carboxyl-terminal hydrolase 31 [Camponotus floridanus]
Length = 571
Score = 40.4 bits (93), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N+AY+LFY++R
Sbjct: 369 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNSAYMLFYQRR 423
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|238878907|gb|EEQ42545.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1362
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
HYTA + +W+YFND V E PQ+ N+AY+LFY++R
Sbjct: 1119 HYTASVKNFRDDKWYYFNDSRVTEINNPQEVVANSAYLLFYRRR 1162
>gi|332022027|gb|EGI62353.1| Ubiquitin carboxyl-terminal hydrolase 31 [Acromyrmex echinatior]
Length = 571
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N+AY+LFY++R
Sbjct: 369 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNSAYMLFYQRR 423
>gi|68474276|ref|XP_718847.1| potential ubiquitin-specific protease [Candida albicans SC5314]
gi|46440639|gb|EAK99943.1| potential ubiquitin-specific protease [Candida albicans SC5314]
Length = 1372
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
HYTA + +W+YFND V E PQ+ N+AY+LFY++R
Sbjct: 1119 HYTASVKNFRDDKWYYFNDSRVTEINNPQEVVANSAYLLFYRRR 1162
>gi|440480617|gb|ELQ61272.1| ubiquitin carboxyl-terminal hydrolase 15 [Magnaporthe oryzae P131]
Length = 2841
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + EW+ +ND +V +Q ++AY+LFY++R S++ + GP
Sbjct: 2548 GLGGGHYTAFAKNFIDGEWYEYNDSSVSKQTNLARMVTSSAYLLFYRRR---SEIPLGGP 2604
>gi|224613346|gb|ACN60252.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 647
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
HYTAY + +WHYF+D +V AY+LFY++RD
Sbjct: 575 HYTAYGKNKADGKWHYFDDSSVSAASEDQIVTKAAYVLFYQRRD 618
>gi|145546913|ref|XP_001459139.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124426962|emb|CAK91742.1| unnamed protein product [Paramecium tetraurelia]
Length = 1025
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 29/55 (52%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
G+ GHYTAY + +W+ F+D E +AY+LFYK+R E+ +
Sbjct: 962 GMGGGHYTAYAKNHENGKWYDFDDSQASEINEDQIVSQSAYVLFYKRRTEEEQTQ 1016
>gi|68474445|ref|XP_718762.1| potential ubiquitin-specific protease [Candida albicans SC5314]
gi|46440549|gb|EAK99854.1| potential ubiquitin-specific protease [Candida albicans SC5314]
Length = 1354
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
HYTA + +W+YFND V E PQ+ N+AY+LFY++R
Sbjct: 1119 HYTASVKNFRDDKWYYFNDSRVTEINNPQEVVANSAYLLFYRRR 1162
>gi|440467717|gb|ELQ36916.1| ubiquitin carboxyl-terminal hydrolase 15 [Magnaporthe oryzae Y34]
Length = 2855
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + EW+ +ND +V +Q ++AY+LFY++R S++ + GP
Sbjct: 2562 GLGGGHYTAFAKNFIDGEWYEYNDSSVSKQTNLARMVTSSAYLLFYRRR---SEIPLGGP 2618
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 439 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|170050063|ref|XP_001870989.1| ubiquitin specific protease [Culex quinquefasciatus]
gi|167871652|gb|EDS35035.1| ubiquitin specific protease [Culex quinquefasciatus]
Length = 1755
Score = 40.4 bits (93), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLE--QRPQDEDFNNAYILFYKKRDED 58
S ++ GHY +Y +PN W+ +ND + E RP+ D + AY+LFY++RD D
Sbjct: 1668 SGMLNGGHYISYAANPN-GSWYCYNDSSCREIPTRPKI-DPSTAYLLFYERRDLD 1720
>gi|403166985|ref|XP_003326813.2| S-formylglutathione hydrolase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375166808|gb|EFP82394.2| S-formylglutathione hydrolase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1410
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ + +WH ++D V E P+ + AY+LFY++R
Sbjct: 1136 GLGGGHYTAFAKNEEDGKWHNYDDSHVTEVNSPERVKSSAAYLLFYRRR 1184
>gi|347965501|ref|XP_321947.5| AGAP001209-PA [Anopheles gambiae str. PEST]
gi|333470482|gb|EAA01803.6| AGAP001209-PA [Anopheles gambiae str. PEST]
Length = 1958
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%), Gaps = 4/55 (7%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLE--QRPQDEDFNNAYILFYKKRDED 58
S ++ GHY +Y +PN W+ +ND + E RP+ D + AY+LFY++RD D
Sbjct: 1871 SGMLNGGHYISYAANPN-GSWYCYNDSSCREIPTRPKI-DPSTAYLLFYERRDLD 1923
>gi|405970705|gb|EKC35586.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 788
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 30/49 (61%), Gaps = 6/49 (12%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLE-----QRPQDEDFNNAYILFYKKR 55
GHY +Y LH + K W+ F+DE V+E + E NAY+LFYKK+
Sbjct: 737 GHYISYCLHGDNK-WYRFDDERVIEVDMEYELTTHEIRQNAYLLFYKKQ 784
>gi|354548287|emb|CCE45023.1| hypothetical protein CPAR2_700270 [Candida parapsilosis]
Length = 793
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
+S GHYT+Y K W YF+D + Q E N NA+ LF+++
Sbjct: 746 LSTGHYTSYVYKSGKKRWCYFDDSKITTNVAQTEVMNKNAFCLFFQR 792
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 442 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 489
>gi|223647442|gb|ACN10479.1| Ubiquitin carboxyl-terminal hydrolase 4 [Salmo salar]
Length = 1005
Score = 40.0 bits (92), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/44 (40%), Positives = 25/44 (56%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
HYTAY + +WHYF+D +V AY+LFY++RD
Sbjct: 933 HYTAYGKNKADGKWHYFDDSSVSAASEDQIVTKAAYVLFYQRRD 976
>gi|348521962|ref|XP_003448495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Oreochromis niloticus]
Length = 911
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
S GHY AY + W+ F+D++V E AY+LFYKK +ED+
Sbjct: 638 ASNGHYIAYCRNDVNNLWYEFDDQSVTEVSEACVQNAEAYVLFYKKSNEDA 688
>gi|427788383|gb|JAA59643.1| Putative ubiquitin c-terminal hydrolase [Rhipicephalus pulchellus]
Length = 1611
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY +Y +PN K W+ +ND + E + D ++AY+LFY++
Sbjct: 1530 LGGGHYVSYACNPNNK-WYCYNDSSCKEVQLDQIDSDSAYMLFYER 1574
>gi|194376994|dbj|BAG63058.1| unnamed protein product [Homo sapiens]
Length = 271
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 212 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 259
>gi|196009203|ref|XP_002114467.1| hypothetical protein TRIADDRAFT_58322 [Trichoplax adhaerens]
gi|190583486|gb|EDV23557.1| hypothetical protein TRIADDRAFT_58322 [Trichoplax adhaerens]
Length = 1517
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHY ++ +PN K W+ FND + E P+ + Y+LFY++ D
Sbjct: 1435 LGGGHYVSFAKNPNNK-WYIFNDSSCKETTPERVSEESPYLLFYERED 1481
>gi|440893726|gb|ELR46396.1| Ubiquitin carboxyl-terminal hydrolase 4 [Bos grunniens mutus]
Length = 963
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVLFYQRRDDE 926
>gi|5410230|gb|AAD42992.1|AF073344_1 ubiquitin-specific protease 3 [Homo sapiens]
Length = 521
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHYTAY H W +FND TV + AYILFY
Sbjct: 462 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 509
>gi|50546843|ref|XP_500891.1| YALI0B14597p [Yarrowia lipolytica]
gi|49646757|emb|CAG83142.1| YALI0B14597p [Yarrowia lipolytica CLIB122]
Length = 1449
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHYTA+ + +W+++ND +V NAY+LFYK+R
Sbjct: 1207 GLGGGHYTAFAKNFVDGKWYHYNDSSVSPISENQLVTANAYLLFYKRR 1254
>gi|47224929|emb|CAG06499.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1669
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 31/47 (65%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY Y +P K+W+ +ND + E + ++ D ++AYILFY+++
Sbjct: 1587 MGGGHYVTYAKNPK-KKWYCYNDSSCKEVQSEEIDADSAYILFYEQQ 1632
>gi|118094484|ref|XP_422389.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Gallus gallus]
Length = 910
Score = 40.0 bits (92), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K +E++ E
Sbjct: 637 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSNEEAQRE 690
>gi|403214829|emb|CCK69329.1| hypothetical protein KNAG_0C02180 [Kazachstania naganishii CBS 8797]
Length = 1231
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 26/43 (60%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY + + W+YF+D V + P+ +AY+LFY +R
Sbjct: 999 HYTAYVKNLTDQNWYYFDDSRVSKTSPEKSIAGSAYLLFYLRR 1041
>gi|431897014|gb|ELK06278.1| Ubiquitin carboxyl-terminal hydrolase 33 [Pteropus alecto]
Length = 931
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 658 ASSGHYIAYCRNNLNNHWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 711
>gi|242024423|ref|XP_002432627.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212518097|gb|EEB19889.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 462
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
GHYTAY HP + WH +ND V + AY+LFY+ + S
Sbjct: 412 GGHYTAYCKHPYSGNWHEYNDSRVSSLSSRSVVSGEAYVLFYELATQTS 460
>gi|426249551|ref|XP_004018513.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Ovis
aries]
Length = 916
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 829 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVLFYQRRDDE 879
>gi|426249549|ref|XP_004018512.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Ovis
aries]
Length = 963
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVLFYQRRDDE 926
>gi|242011010|ref|XP_002426250.1| Ubl carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212510313|gb|EEB13512.1| Ubl carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 511
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
GV GHYTA+ + N EW +FND TV YILFY +R+
Sbjct: 456 GVGCGHYTAFAI--NDGEWFHFNDSTVRPTGQATVAKCKPYILFYIRRE 502
>gi|154152175|ref|NP_001093789.1| ubiquitin carboxyl-terminal hydrolase 4 [Bos taurus]
gi|158513811|sp|A6QR55.1|UBP4_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|151554732|gb|AAI50121.1| USP4 protein [Bos taurus]
gi|296474786|tpg|DAA16901.1| TPA: ubiquitin specific protease 4 [Bos taurus]
Length = 963
Score = 40.0 bits (92), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY + +W+YF+D V AY+LFY++RD++
Sbjct: 876 AMGVGHYTAYAKNKLNGKWYYFDDSNVSLACEDQIVTKAAYVLFYQRRDDE 926
>gi|397621192|gb|EJK66165.1| hypothetical protein THAOC_12931 [Thalassiosira oceanica]
Length = 471
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 25/48 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GHY A +W FND + E +D +AYILFY +RD
Sbjct: 385 LSGGHYVASLKSEEDGKWRLFNDAQIYELSSKDVVDPSAYILFYVRRD 432
>gi|156373862|ref|XP_001629529.1| predicted protein [Nematostella vectensis]
gi|156216531|gb|EDO37466.1| predicted protein [Nematostella vectensis]
Length = 452
Score = 40.0 bits (92), Expect = 0.19, Method: Composition-based stats.
Identities = 21/56 (37%), Positives = 26/56 (46%), Gaps = 2/56 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
V GVSAGHYT + H W+ FND +V + YI FY +R D
Sbjct: 390 VHHGSGVSAGHYTTFAFHDGA--WYNFNDSSVSRIDEEMVAKCKGYIFFYTRRHPD 443
>gi|389625819|ref|XP_003710563.1| ubiquitin specific peptidase 11 [Magnaporthe oryzae 70-15]
gi|351650092|gb|EHA57951.1| ubiquitin specific peptidase 11 [Magnaporthe oryzae 70-15]
Length = 1515
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF-NNAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + EW+ +ND +V +Q ++AY+LFY++R S++ + GP
Sbjct: 1222 GLGGGHYTAFAKNFIDGEWYEYNDSSVSKQTHLARMVTSSAYLLFYRRR---SEIPLGGP 1278
>gi|449547942|gb|EMD38909.1| hypothetical protein CERSUDRAFT_104201 [Ceriporiopsis subvermispora
B]
Length = 1264
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY L+ K+W++F+D V R + +NAY+LFY++R
Sbjct: 1078 YRAYALNDTDKQWYHFDDSYVTPTRAEAAVNSNAYLLFYRRR 1119
>gi|443702950|gb|ELU00773.1| hypothetical protein CAPTEDRAFT_224225 [Capitella teleta]
Length = 1175
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 31/66 (46%), Gaps = 7/66 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G+ GHYTAY P+ ++ W F+D V AY+LFY++RD +
Sbjct: 1014 GIMGGHYTAYARCPDPQDAKRSLIDWRLFDDSIVSSSAESQVVTRAAYVLFYRRRDVNVS 1073
Query: 61 VEVSGP 66
+ S P
Sbjct: 1074 LPESLP 1079
>gi|195999830|ref|XP_002109783.1| hypothetical protein TRIADDRAFT_53019 [Trichoplax adhaerens]
gi|190587907|gb|EDV27949.1| hypothetical protein TRIADDRAFT_53019 [Trichoplax adhaerens]
Length = 921
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ +GHYTA +P+ W+ F+D V E N+AYILFY +R
Sbjct: 746 MGSGHYTACCRNPSNGRWYSFDDARVEEVSSDFIVTNDAYILFYAQR 792
>gi|145547132|ref|XP_001459248.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427072|emb|CAK91851.1| unnamed protein product [Paramecium tetraurelia]
Length = 1050
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 31/55 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
G+ GHYTA+ + +W+ F+D V E +AY+LFYK+R +D + +
Sbjct: 990 GMGGGHYTAFGKNHLNGKWYNFDDAQVGEVDEDQVVTKSAYVLFYKRRSKDENTQ 1044
>gi|427793919|gb|JAA62411.1| Putative ubiquitin c-terminal hydrolase, partial [Rhipicephalus
pulchellus]
Length = 1519
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY +Y +PN K W+ +ND + E + D ++AY+LFY++
Sbjct: 1438 LGGGHYVSYACNPNNK-WYCYNDSSCKEVQLDQIDSDSAYMLFYER 1482
>gi|328716317|ref|XP_001952124.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like
[Acyrthosiphon pisum]
Length = 827
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 28/46 (60%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+GHYTA+ +P K+W+ F+D V +AY+LFY++RD
Sbjct: 684 SGHYTAFCKNPYDKQWYSFDDTKVTPIPDTSLVTTSAYMLFYQRRD 729
>gi|149237286|ref|XP_001524520.1| hypothetical protein LELG_04492 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146452055|gb|EDK46311.1| hypothetical protein LELG_04492 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 875
Score = 40.0 bits (92), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETV--LEQRPQDEDFNNAYILFYKK 54
+ V + +S+GHY + L PN + W ++DE + +E+R D NAY+L Y K
Sbjct: 816 VIVHEGRLISSGHYITHVLQPNGQSWATYDDEYINPIEERKALND-PNAYVLVYTK 870
>gi|403361735|gb|EJY80573.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1076
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G GHYTAY L+ +W+ +D + + P ++AY LFY++R++
Sbjct: 998 GCGGGHYTAYALNWMENQWYSLDDSSCQKTNPNRVVSDSAYNLFYRRREK 1047
>gi|164656707|ref|XP_001729481.1| hypothetical protein MGL_3516 [Malassezia globosa CBS 7966]
gi|159103372|gb|EDP42267.1| hypothetical protein MGL_3516 [Malassezia globosa CBS 7966]
Length = 1232
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%), Gaps = 7/52 (13%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRP-QDEDF---NNAYILFYKKR 55
G+ GHYTA+ +P W+ F+D V RP D D + AY+LFY++R
Sbjct: 1067 GLGGGHYTAFAKNPADGHWYNFDDSCV---RPVSDPDMVKSSAAYLLFYRRR 1115
>gi|47086035|ref|NP_998392.1| ubiquitin carboxyl-terminal hydrolase 33 [Danio rerio]
gi|46362501|gb|AAH66557.1| Ubiquitin specific peptidase 33 [Danio rerio]
Length = 897
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + + W+ F+D++V E AY+LFYKK ++++ E
Sbjct: 624 ASSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQNAEAYVLFYKKSNDETQKE 677
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 835 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 888
>gi|281312481|sp|A5PMR2.1|UBP33_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
Length = 897
Score = 40.0 bits (92), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 31/54 (57%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + + W+ F+D++V E AY+LFYKK ++++ E
Sbjct: 624 ASSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQNAEAYVLFYKKSNDETQKE 677
>gi|403345455|gb|EJY72093.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1076
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G GHYTAY L+ +W+ +D + + P ++AY LFY++R++
Sbjct: 998 GCGGGHYTAYALNWMENQWYSLDDSSCQKTNPNRVVSDSAYNLFYRRREK 1047
>gi|363738688|ref|XP_003642052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Gallus
gallus]
Length = 1367
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G+ GHYTAY PN K W F+D TV AY+LFY++R+ +
Sbjct: 1274 GMIGGHYTAYARLPNDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVE 1333
Query: 61 VEVSG 65
+ G
Sbjct: 1334 RPLPG 1338
>gi|405968000|gb|EKC33109.1| Ubiquitin carboxyl-terminal hydrolase 8 [Crassostrea gigas]
Length = 1129
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 29/47 (61%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
S + GHYTAY +P T++W ++D+ V E + D + AY+L+Y
Sbjct: 1069 SGTLDGGHYTAYCRNPCTEKWFKYDDDHVSEMKESDVRSSLAYVLYY 1115
>gi|357289787|gb|AET73100.1| ubiquitin protease [Phaeocystis globosa virus 12T]
gi|357292586|gb|AET73922.1| ubiquitin-specific protease [Phaeocystis globosa virus 14T]
Length = 345
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
G GHYT++ + N K W++FND V E P N+ Y FYKK
Sbjct: 297 GCHGGHYTSFVKNANNK-WYHFNDTNVNEVNPAKIITNSGYCYFYKK 342
>gi|449276706|gb|EMC85138.1| Ubiquitin carboxyl-terminal hydrolase 19 [Columba livia]
Length = 1425
Score = 39.7 bits (91), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G+ GHYTAY PN K W F+D TV AY+LFY++R+ +
Sbjct: 1265 GMIGGHYTAYARLPNDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVE 1324
Query: 61 VEVSG 65
+ G
Sbjct: 1325 RPLPG 1329
>gi|451927349|gb|AGF85227.1| C19 subfamily protein [Moumouvirus goulette]
Length = 343
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V + G++ GHY Y L N +W+ FNDE V ++AY+LFY ++D
Sbjct: 286 VNHTGGLNHGHYYTYNLDINMDKWYMFNDEDVSSIYHNRVITSSAYLLFYVRQD 339
>gi|350424599|ref|XP_003493849.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Bombus
impatiens]
Length = 928
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 729 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNAAYMLFYQRR 783
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 39.7 bits (91), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
GHYTAY +P EW+ +ND V +NAY+LFY+
Sbjct: 345 GGHYTAYCRNPALGEWYSYNDSRVSPISSGQVRTSNAYVLFYE 387
>gi|195121782|ref|XP_002005398.1| GI19092 [Drosophila mojavensis]
gi|193910466|gb|EDW09333.1| GI19092 [Drosophila mojavensis]
Length = 940
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 32/66 (48%), Gaps = 8/66 (12%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK--------RDEDSD 60
V GHYT Y + W+ ++D+ V+E P AY+LFY+K R+E +
Sbjct: 482 VGGGHYTCYARNALNGRWYEYDDQLVMEVTPDVVQNCQAYVLFYQKHNPQMKLVREEAIN 541
Query: 61 VEVSGP 66
+ S P
Sbjct: 542 LSTSNP 547
>gi|380027759|ref|XP_003697586.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Apis
florea]
Length = 567
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 368 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNAAYMLFYQRR 422
>gi|194756894|ref|XP_001960705.1| GF13485 [Drosophila ananassae]
gi|190622003|gb|EDV37527.1| GF13485 [Drosophila ananassae]
Length = 981
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V GHYT Y + W+ F+D+ V E P+ AY+LFY+K +
Sbjct: 487 VGGGHYTCYARNVLNGRWYEFDDQFVTEVSPETVATCQAYVLFYQKHN 534
>gi|326668740|ref|XP_002662556.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 1 [Danio
rerio]
Length = 1009
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
HYTAY + +W+YF+D +V AY+LFY++RD D+
Sbjct: 939 HYTAYGKNKADGKWYYFDDSSVSAATEDQIVTKAAYVLFYQRRDADT 985
>gi|383866029|ref|XP_003708474.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Megachile
rotundata]
Length = 935
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 732 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNAAYMLFYQRR 786
>gi|340716424|ref|XP_003396698.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Bombus
terrestris]
Length = 928
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 729 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNAAYMLFYQRR 783
>gi|241594842|ref|XP_002404393.1| ubiquitin specific protease, putative [Ixodes scapularis]
gi|215500387|gb|EEC09881.1| ubiquitin specific protease, putative [Ixodes scapularis]
Length = 1583
Score = 39.7 bits (91), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 30/50 (60%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHY +Y +PN + W+ +ND + E + D ++AY+LFY++ D
Sbjct: 1502 LGGGHYVSYACNPNNR-WYCYNDSSCKEVQLDQIDSDSAYMLFYEREGID 1550
>gi|326925187|ref|XP_003208801.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Meleagris
gallopavo]
Length = 910
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K +E++ E
Sbjct: 637 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKCNEEAQRE 690
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 728 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 781
>gi|390343728|ref|XP_003725951.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like
[Strongylocentrotus purpuratus]
Length = 979
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 27/44 (61%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
HYTAY + T+ W+YF+D +V + + AY+LFY ++D
Sbjct: 870 HYTAYAQNACTQNWYYFDDSSVSDASKEQVVSKAAYVLFYLRKD 913
>gi|345328594|ref|XP_001505377.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 [Ornithorhynchus
anatinus]
Length = 974
Score = 39.7 bits (91), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 26/49 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+YF+D V AY+LFY++RD
Sbjct: 888 AMGVGHYTAYAKNRLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRD 936
>gi|19075499|ref|NP_587999.1| ubiquitin C-terminal hydrolase Ubp1 [Schizosaccharomyces pombe
972h-]
gi|24638334|sp|Q9USM5.1|UBP1_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 1;
AltName: Full=Deubiquitinating enzyme 1; AltName:
Full=Ubiquitin thioesterase 1; AltName:
Full=Ubiquitin-specific-processing protease 1
gi|5748692|emb|CAB53084.1| ubiquitin C-terminal hydrolase Ubp1 [Schizosaccharomyces pombe]
Length = 849
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 31/48 (64%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GHYTAY +++ + F+D + E P+D ++AY+LFY+ ++
Sbjct: 802 MSNGHYTAYARDASSQTFFKFDDTAICEIDPEDIVTSSAYVLFYRAKN 849
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 769 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 822
>gi|322801911|gb|EFZ22464.1| hypothetical protein SINV_03289 [Solenopsis invicta]
Length = 690
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 488 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNAAYMLFYQRR 542
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 762 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 815
>gi|292615153|ref|XP_002662557.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4 isoform 2 [Danio
rerio]
Length = 958
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 27/47 (57%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
HYTAY + +W+YF+D +V AY+LFY++RD D+
Sbjct: 888 HYTAYGKNKADGKWYYFDDSSVSAATEDQIVTKAAYVLFYQRRDADT 934
>gi|409049827|gb|EKM59304.1| hypothetical protein PHACADRAFT_88204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 667
Score = 39.7 bits (91), Expect = 0.25, Method: Composition-based stats.
Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 2/60 (3%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY-KKRDEDSDVEVSGP 66
G S+GHY A+ + +WH ND+TV Q NAYILFY +++ + + VS P
Sbjct: 385 GPSSGHYYAH-VKDAAGQWHEMNDDTVSRQSGAPLGMKNAYILFYIREKGQALEAVVSQP 443
>gi|328788793|ref|XP_396802.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like isoform 1
[Apis mellifera]
Length = 935
Score = 39.7 bits (91), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 736 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVEAVNDTNLITNAAYMLFYQRR 790
>gi|348586746|ref|XP_003479129.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Cavia
porcellus]
Length = 857
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 28/52 (53%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
GHY AY + K W+ F+D++V E AY+LFY+K E++ E
Sbjct: 590 GGHYIAYCRNNLNKLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 641
>gi|281349070|gb|EFB24654.1| hypothetical protein PANDA_011320 [Ailuropoda melanoleuca]
Length = 929
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 656 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 709
>gi|431894059|gb|ELK03865.1| Ubiquitin carboxyl-terminal hydrolase 43 [Pteropus alecto]
Length = 1417
Score = 39.7 bits (91), Expect = 0.26, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 30/49 (61%), Gaps = 2/49 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV E +DE AYILFY+KR+
Sbjct: 662 LQGGHYTAYCRNSLDGQWYSYDDSTV-ESLLEDEVITRGAYILFYQKRN 709
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 636 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 689
>gi|226480822|emb|CAX73508.1| Ubiquitin carboxyl-terminal hydrolase 2 [Schistosoma japonicum]
Length = 496
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 24/47 (51%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
S V GHYTA L+P T +WH FND V + Y+LFY
Sbjct: 446 SGSVYTGHYTASCLNPYTGDWHSFNDSHVHLISENSAISSEGYVLFY 492
>gi|194211186|ref|XP_001498483.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Equus
caballus]
Length = 961
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 688 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 741
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 683 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 736
>gi|55731067|emb|CAH92249.1| hypothetical protein [Pongo abelii]
Length = 789
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 637 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 690
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 669 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722
>gi|449508398|ref|XP_002189650.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Taeniopygia guttata]
Length = 911
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQRE 691
>gi|426215772|ref|XP_004002143.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Ovis aries]
Length = 912
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 639 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 692
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 681 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 734
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 636 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 689
>gi|5689531|dbj|BAA83049.1| KIAA1097 protein [Homo sapiens]
Length = 980
Score = 39.7 bits (91), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 707 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 760
>gi|403258399|ref|XP_003921756.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Saimiri boliviensis boliviensis]
Length = 1020
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 770 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 823
>gi|345801778|ref|XP_537108.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1
[Canis lupus familiaris]
Length = 907
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 634 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 687
>gi|75055226|sp|Q5REG5.1|UBP33_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|55726137|emb|CAH89842.1| hypothetical protein [Pongo abelii]
Length = 914
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 637 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 690
>gi|348517076|ref|XP_003446061.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 11-like
[Oreochromis niloticus]
Length = 1009
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 29/50 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYT Y + + +W+YF+D V + AY+LFY+++D+
Sbjct: 911 GLRDGHYTTYAKNKDNGQWYYFDDSKVTYATEDQIVTSAAYVLFYQRQDK 960
>gi|291398653|ref|XP_002715595.1| PREDICTED: ubiquitin specific protease 33 [Oryctolagus cuniculus]
Length = 873
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 604 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 657
>gi|449508402|ref|XP_004176928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2
[Taeniopygia guttata]
Length = 903
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 630 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQRE 683
>gi|426330112|ref|XP_004026068.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Gorilla gorilla gorilla]
Length = 1058
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 780 SGGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 832
>gi|33438289|dbj|BAC65724.2| mKIAA1097 protein [Mus musculus]
Length = 837
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 564 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 617
>gi|410301274|gb|JAA29237.1| ubiquitin specific peptidase 33 [Pan troglodytes]
Length = 942
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 669 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722
>gi|301773886|ref|XP_002922367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ailuropoda melanoleuca]
Length = 932
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 659 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 712
>gi|18698433|gb|AAL78314.1|AF383172_1 pVHL-interacting deubiquitinating enzyme 1 type I [Homo sapiens]
Length = 942
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 669 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722
>gi|42516561|ref|NP_963920.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Homo sapiens]
gi|16741735|gb|AAH16663.1| Ubiquitin specific peptidase 33 [Homo sapiens]
gi|119626773|gb|EAX06368.1| ubiquitin specific peptidase 33, isoform CRA_b [Homo sapiens]
gi|123981168|gb|ABM82413.1| ubiquitin specific peptidase 33 [synthetic construct]
gi|123995993|gb|ABM85598.1| ubiquitin specific peptidase 33 [synthetic construct]
Length = 828
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 661 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 714
>gi|417413175|gb|JAA52933.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 935
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 662 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 715
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 39.3 bits (90), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 636 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 689
>gi|440905214|gb|ELR55625.1| Ubiquitin carboxyl-terminal hydrolase 33, partial [Bos grunniens
mutus]
Length = 929
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 656 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 709
>gi|42516565|ref|NP_963918.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Homo sapiens]
gi|119626772|gb|EAX06367.1| ubiquitin specific peptidase 33, isoform CRA_a [Homo sapiens]
Length = 911
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 691
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 636 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 689
>gi|417413151|gb|JAA52921.1| Putative ubiquitin carboxyl-terminal hydrolase 33, partial
[Desmodus rotundus]
Length = 927
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 654 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 707
>gi|402855020|ref|XP_003892146.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Papio anubis]
gi|380786519|gb|AFE65135.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Macaca mulatta]
Length = 911
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 691
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 636 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 689
>gi|118404614|ref|NP_001072879.1| ubiquitin specific peptidase 19 [Xenopus (Silurana) tropicalis]
gi|116487747|gb|AAI25669.1| hypothetical protein MGC145127 [Xenopus (Silurana) tropicalis]
Length = 1435
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY PN K W F+D TV AY+LFY++R+
Sbjct: 1306 GMIGGHYTAYARLPNEKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRN 1361
>gi|155372005|ref|NP_001094609.1| ubiquitin carboxyl-terminal hydrolase 33 [Bos taurus]
gi|281312480|sp|A6QNM7.1|UBP33_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|151556801|gb|AAI48906.1| USP33 protein [Bos taurus]
gi|296489213|tpg|DAA31326.1| TPA: ubiquitin specific protease 33 [Bos taurus]
Length = 912
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 639 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 692
>gi|42516567|ref|NP_055832.3| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Homo sapiens]
gi|116242838|sp|Q8TEY7.2|UBP33_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1;
Short=hVDU1
gi|119626774|gb|EAX06369.1| ubiquitin specific peptidase 33, isoform CRA_c [Homo sapiens]
Length = 942
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 669 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722
>gi|332809270|ref|XP_003308214.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
troglodytes]
Length = 828
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 661 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 714
>gi|119626776|gb|EAX06371.1| ubiquitin specific peptidase 33, isoform CRA_e [Homo sapiens]
Length = 942
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 669 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722
>gi|119626775|gb|EAX06370.1| ubiquitin specific peptidase 33, isoform CRA_d [Homo sapiens]
Length = 911
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 691
>gi|10434504|dbj|BAB14279.1| unnamed protein product [Homo sapiens]
Length = 828
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 661 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 714
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 628 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 681
>gi|209413794|ref|NP_001124855.1| ubiquitin carboxyl-terminal hydrolase 33 [Pongo abelii]
Length = 910
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 637 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 690
>gi|29612641|gb|AAH49870.1| Usp33 protein, partial [Mus musculus]
Length = 393
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 121 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 173
>gi|18698435|gb|AAL78315.1|AF383173_1 pVHL-interacting deubiquitinating enzyme 1 type II [Homo sapiens]
gi|168278803|dbj|BAG11281.1| ubiquitin carboxyl-terminal hydrolase 33 [synthetic construct]
Length = 911
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 691
>gi|332809266|ref|XP_513509.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Pan
troglodytes]
gi|397472606|ref|XP_003807831.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
paniscus]
Length = 911
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 691
>gi|167525557|ref|XP_001747113.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774408|gb|EDQ88037.1| predicted protein [Monosiga brevicollis MX1]
Length = 344
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 32/54 (59%), Gaps = 8/54 (14%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRDEDSDVE 62
GHY AY H T +W+Y++D+T +R D+ + AY+LFY +ED V+
Sbjct: 295 GHYVAYARHAVTGDWYYYDDDTC--RRVSDDSYLGHRGAYLLFY---EEDCSVQ 343
>gi|62859025|ref|NP_001016228.1| ubiquitin carboxyl-terminal hydrolase 33 [Xenopus (Silurana)
tropicalis]
gi|123892401|sp|Q28CN3.1|UBP33_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33
gi|89268163|emb|CAJ82183.1| ubiquitin specific protease 33 [Xenopus (Silurana) tropicalis]
Length = 892
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 619 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEATVQNAEAYVLFYRKASEEAQKE 672
>gi|307201065|gb|EFN80997.1| Ubiquitin carboxyl-terminal hydrolase 31 [Harpegnathos saltator]
Length = 525
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+C + + GHYTA+ +P +W+ F+D V + N AY+LFY++R
Sbjct: 323 ICNHHGQDLQGGHYTAFCRNPYDTQWYCFDDTRVETVNDTNLITNAAYMLFYQRR 377
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 39.3 bits (90), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 628 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 681
>gi|332809268|ref|XP_003308213.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Pan
troglodytes]
gi|397472608|ref|XP_003807832.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Pan
paniscus]
Length = 942
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 669 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 628 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 681
>gi|449474137|ref|XP_004176996.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 19 [Taeniopygia guttata]
Length = 855
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G+ GHYTAY PN K W F+D TV AY+LFY++R+ +
Sbjct: 726 GMIGGHYTAYARLPNDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVE 785
Query: 61 VEVSG 65
+ G
Sbjct: 786 RPLPG 790
>gi|340508861|gb|EGR34476.1| hypothetical protein IMG5_010250 [Ichthyophthirius multifiliis]
Length = 347
Score = 39.3 bits (90), Expect = 0.29, Method: Composition-based stats.
Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
GHY YT PN K+W+ ND +V + Q+ A++LFY KR
Sbjct: 276 GHYYCYTKSPN-KQWYCMNDSSVNQVSFQEVQNEKAFLLFYSKR 318
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 39.3 bits (90), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 628 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 681
>gi|427797533|gb|JAA64218.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1080
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
++ GHY AY +W+ ++D +V E + D NAYILFY D
Sbjct: 1024 LATGHYIAYCRAGLGGQWYMYDDASVTEVTLSESDKRNAYILFYTSVD 1071
>gi|393907263|gb|EFO20645.2| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 1143
Score = 39.3 bits (90), Expect = 0.30, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+++GHY AY N+ +W FND + D +AY+LFY++ D
Sbjct: 1097 AMASGHYVAYA--KNSNQWFSFNDSRCQAVKESQVDKKSAYLLFYERMD 1143
>gi|449275838|gb|EMC84595.1| Ubiquitin carboxyl-terminal hydrolase 33 [Columba livia]
Length = 911
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 638 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSETTVQNAEAYVLFYRKSSEEAQRE 691
>gi|21619540|gb|AAH31366.1| Usp33 protein, partial [Mus musculus]
Length = 685
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 412 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 465
>gi|281211003|gb|EFA85169.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 1138
Score = 39.3 bits (90), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY L+ +W F+D + P + AY+LFY++RD
Sbjct: 950 SLGGGHYTAYGLNDLENQWIKFDDSSTHNVDPSHIVSDAAYVLFYRRRD 998
>gi|395536958|ref|XP_003770475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Sarcophilus
harrisii]
Length = 1139
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D TV + AYILFY+KR+
Sbjct: 664 MQGGHYTAYCRNSLDGQWYSYDDSTVEPVLEDEISTQGAYILFYQKRN 711
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 628 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQRE 681
>gi|365761007|gb|EHN02684.1| Ubp5p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 869
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
S + GHYT+Y K W++F+D R DE NAY+LFY++
Sbjct: 818 SGSLYGGHYTSYVYKGPQKGWYFFDDSVYCPIRFNDEFITPNAYVLFYER 867
>gi|145551979|ref|XP_001461666.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429501|emb|CAK94293.1| unnamed protein product [Paramecium tetraurelia]
Length = 484
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S +++GHYTAY + + +W+++ND +++ Q E+ ++AY+LFY K
Sbjct: 338 SGTLTSGHYTAYAKNRDDLQWYHYND-SLVSPVSQPENQSDAYLLFYFK 385
>gi|4884351|emb|CAB43288.1| hypothetical protein [Homo sapiens]
Length = 276
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 3 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 56
>gi|312082391|ref|XP_003143425.1| ubiquitin carboxyl-terminal hydrolase [Loa loa]
Length = 1131
Score = 39.3 bits (90), Expect = 0.31, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+++GHY AY N+ +W FND + D +AY+LFY++ D
Sbjct: 1085 AMASGHYVAYA--KNSNQWFSFNDSRCQAVKESQVDKKSAYLLFYERMD 1131
>gi|241714784|ref|XP_002413525.1| ubiquitin carboxy-terminal hydrolase, putative [Ixodes scapularis]
gi|215507339|gb|EEC16833.1| ubiquitin carboxy-terminal hydrolase, putative [Ixodes scapularis]
Length = 913
Score = 39.3 bits (90), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY + T++W+YF+D +V + AY+LFY KR
Sbjct: 871 HYTAYAKNKETEQWYYFDDNSVSPATEDNVVSKAAYVLFYAKR 913
>gi|255730030|ref|XP_002549940.1| hypothetical protein CTRG_04237 [Candida tropicalis MYA-3404]
gi|240133009|gb|EER32566.1| hypothetical protein CTRG_04237 [Candida tropicalis MYA-3404]
Length = 1324
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/44 (45%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
HYTA + +W+YFND V E P++ N+AY+LFY+KR
Sbjct: 1094 HYTASVKNFRDHKWYYFNDSRVTEIPNPEEVVANSAYLLFYRKR 1137
>gi|410080616|ref|XP_003957888.1| hypothetical protein KAFR_0F01560 [Kazachstania africana CBS 2517]
gi|372464475|emb|CCF58753.1| hypothetical protein KAFR_0F01560 [Kazachstania africana CBS 2517]
Length = 1171
Score = 39.3 bits (90), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 18/43 (41%), Positives = 26/43 (60%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY + +W+YF+D V E P+ +AY+LFY +R
Sbjct: 978 HYTAYVKNFIDNKWYYFDDSRVYETDPEKSVSGSAYLLFYLRR 1020
>gi|348681733|gb|EGZ21549.1| hypothetical protein PHYSODRAFT_299232 [Phytophthora sojae]
Length = 1696
Score = 39.3 bits (90), Expect = 0.32, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHY AY L + +W FND + ++ + AYILFY++RD
Sbjct: 1592 ALGGGHYFAYILSDHDGKWKCFNDHQCKDIDEKEVVSSMAYILFYRRRD 1640
>gi|410928885|ref|XP_003977830.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Takifugu
rubripes]
Length = 1556
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY Y +P K+W+ +ND + E ++ D ++AYILFY+++
Sbjct: 1474 MGGGHYVTYAKNPK-KKWYCYNDSSCKEVHSEEIDTDSAYILFYEQQ 1519
>gi|403364554|gb|EJY82041.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1072
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 21/47 (44%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFND-ETVLEQRPQDEDFNNAYILFYKK 54
++ GHY AYT + ++ W+YFND E L + Q AYILFY K
Sbjct: 588 MTQGHYYAYTWNHASRNWYYFNDHEIKLIKNLQKIQSPEAYILFYSK 634
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 39.3 bits (90), Expect = 0.33, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%), Gaps = 2/59 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
V G +GHYT Y H + W+ FND +V + AYILFY ++ D +
Sbjct: 438 VHHGSGAGSGHYTTYARHEGS--WYNFNDSSVSLTNEESIQHCKAYILFYTRQYPDVSI 494
>gi|327288430|ref|XP_003228929.1| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Anolis carolinensis]
Length = 297
Score = 39.3 bits (90), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTA+ H T+ W+ F+D + E D + AY+LFY +
Sbjct: 240 LDGGHYTAFCKHTLTQSWYSFDDSQISEISECDVHTSAAYLLFYSSQ 286
>gi|327288428|ref|XP_003228928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Anolis
carolinensis]
Length = 1066
Score = 39.3 bits (90), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
G+ GHYTAY + + W+ F+D V E + AYILFY
Sbjct: 1010 GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1054
>gi|388855753|emb|CCF50741.1| related to UBP12-ubiquitin C-terminal hydrolase [Ustilago hordei]
Length = 1422
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%), Gaps = 7/52 (13%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRP----QDEDFNNAYILFYKKR 55
G+ GHYTA+ P +W+ F+D +V RP + ++AY+LFY++R
Sbjct: 1262 GLGGGHYTAFAKSPADGKWYEFDDLSV---RPVANAETVKSSSAYLLFYRRR 1310
>gi|330822614|ref|XP_003291744.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
gi|325078064|gb|EGC31737.1| hypothetical protein DICPUDRAFT_50006 [Dictyostelium purpureum]
Length = 984
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 33/62 (53%), Gaps = 13/62 (20%)
Query: 8 GVSAGHYTAYTLH-PNTKE------------WHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHYTAY L+ P TKE W+ F+D V E ++ + AY+LFY++
Sbjct: 860 SLGGGHYTAYALNEPETKEAKANGNSNGNGKWYKFDDSHVSEANVENVESEAAYVLFYRR 919
Query: 55 RD 56
+D
Sbjct: 920 KD 921
>gi|321462098|gb|EFX73124.1| hypothetical protein DAPPUDRAFT_307972 [Daphnia pulex]
Length = 338
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 24/43 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
+GHYTA HP + WH +ND + Q + AY+LFY+
Sbjct: 288 SGHYTASCRHPFSANWHEYNDSRISNLTAQRVVSSEAYLLFYE 330
>gi|25150771|ref|NP_498311.2| Protein CYK-3, isoform a [Caenorhabditis elegans]
gi|18766553|gb|AAL79016.1|AF469173_1 ubiquitin c-terminal hydrolase [Caenorhabditis elegans]
gi|351062913|emb|CCD70947.1| Protein CYK-3, isoform a [Caenorhabditis elegans]
Length = 1175
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GH+ AY N +W ND +V E ++ D AY+LFY+++D
Sbjct: 1127 LSCGHFIAYA-KSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKD 1173
>gi|340371267|ref|XP_003384167.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Amphimedon
queenslandica]
Length = 1159
Score = 38.9 bits (89), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYT++ +PN+ W+Y+ND + E + Y+LFY+ RD
Sbjct: 1065 LGGGHYTSFAKNPNSN-WYYYNDSSCKETTEDKVSSESPYMLFYEVRD 1111
>gi|345327617|ref|XP_001506516.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like
[Ornithorhynchus anatinus]
Length = 292
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
GHY AY + W+ F+D++V E AY+LFY+K ED+ E
Sbjct: 22 GHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEDAQKE 72
>gi|321467443|gb|EFX78433.1| hypothetical protein DAPPUDRAFT_225412 [Daphnia pulex]
Length = 1555
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 26/46 (56%), Gaps = 1/46 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+ GHY +Y +PN K W Y+ND T E + AY+LF+++
Sbjct: 1461 MGGGHYISYAKNPNGK-WFYYNDSTCKESSANQIEGQTAYMLFFER 1505
>gi|7511085|pir||T29010 hypothetical protein ZK328.1 - Caenorhabditis elegans
Length = 1041
Score = 38.9 bits (89), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GH+ AY N +W ND +V E ++ D AY+LFY+++D
Sbjct: 993 LSCGHFIAYA-KSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKD 1039
>gi|401842652|gb|EJT44770.1| UBP5-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 823
Score = 38.9 bits (89), Expect = 0.36, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
S + GHYT+Y K W++F+D R DE NAY+LFY++
Sbjct: 772 SGSLYGGHYTSYVYKGPQKGWYFFDDSVYCPIRFNDEFITPNAYVLFYER 821
>gi|71997161|ref|NP_001022992.1| Protein CYK-3, isoform b [Caenorhabditis elegans]
gi|351062914|emb|CCD70948.1| Protein CYK-3, isoform b [Caenorhabditis elegans]
Length = 1178
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GH+ AY N +W ND +V E ++ D AY+LFY+++D
Sbjct: 1130 LSCGHFIAYA-KSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKD 1176
>gi|344228583|gb|EGV60469.1| cysteine proteinase [Candida tenuis ATCC 10573]
Length = 859
Score = 38.9 bits (89), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 5/51 (9%)
Query: 9 VSAGHYTAYTLHPN----TKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
++ GHYTAY + T+EW YF+D V + Q++ N NAY LFY++
Sbjct: 808 LTTGHYTAYVHKESDKKKTREWCYFDDSKVSFNQKQNQVLNKNAYCLFYQR 858
>gi|432851662|ref|XP_004067022.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8-like [Oryzias
latipes]
Length = 1074
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
G+ GHYTAY + + W+ F+D V E + AYILFY
Sbjct: 1027 GLDGGHYTAYCKNATKQRWYKFDDHEVSEISTSSVKSSAAYILFY 1071
>gi|358339019|dbj|GAA30778.2| ubiquitin carboxyl-terminal hydrolase 31 [Clonorchis sinensis]
Length = 827
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 29/50 (58%), Gaps = 7/50 (14%)
Query: 12 GHYTAYTLHPNT-------KEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYTA L K W+ F+DE V E +P+ + ++AY+LFY++
Sbjct: 747 GHYTAACLTATVGDDQSVEKRWYLFDDEIVKEIKPELVNRSSAYLLFYER 796
>gi|301107127|ref|XP_002902646.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
gi|262098520|gb|EEY56572.1| ubiquitin-specific protease, putative [Phytophthora infestans T30-4]
Length = 1492
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 27/49 (55%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHY AY L + +W FND + ++ + AYILFY++RD
Sbjct: 1388 ALGGGHYFAYVLSDHDGKWKCFNDHQCKDIDEKEVVSSMAYILFYRRRD 1436
>gi|327266242|ref|XP_003217915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Anolis
carolinensis]
Length = 1414
Score = 38.9 bits (89), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 30/66 (45%), Gaps = 7/66 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G+ GHYTAY P+ K W F+D TV AY+LFY++R+ +
Sbjct: 1257 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVE 1316
Query: 61 VEVSGP 66
GP
Sbjct: 1317 RPPRGP 1322
>gi|47216364|emb|CAG02422.1| unnamed protein product [Tetraodon nigroviridis]
Length = 333
Score = 38.9 bits (89), Expect = 0.39, Method: Composition-based stats.
Identities = 18/56 (32%), Positives = 30/56 (53%), Gaps = 7/56 (12%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD-------EDFNNAYILFYKKRDED 58
+ GHYTA+ HP+ + W++ ND V + + D + AY+L Y+K +D
Sbjct: 270 TCGHYTAFVCHPSDQRWYHANDSHVKQVSWEQVKSAYGGHDRDAAYMLMYRKGPKD 325
>gi|341879705|gb|EGT35640.1| hypothetical protein CAEBREN_07724 [Caenorhabditis brenneri]
Length = 1172
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GH+ AY N +W ND +V E ++ D AY+LFY+++D
Sbjct: 1122 LSCGHFIAYA-KSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKD 1168
>gi|308460004|ref|XP_003092311.1| CRE-CYK-3 protein [Caenorhabditis remanei]
gi|308253579|gb|EFO97531.1| CRE-CYK-3 protein [Caenorhabditis remanei]
Length = 1168
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GH+ AY N +W ND +V E ++ D AY+LFY+++D
Sbjct: 1120 LSCGHFIAYA-KSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKD 1166
>gi|145519321|ref|XP_001445527.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124412982|emb|CAK78130.1| unnamed protein product [Paramecium tetraurelia]
Length = 973
Score = 38.9 bits (89), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 30/52 (57%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
G+ GHYTA + TK+W+ F+D V E Q +AY+L Y+ R ++S
Sbjct: 911 GLGGGHYTACAKNKYTKKWYNFDDSHVGEISEQQVITKSAYVLCYQLRTDES 962
>gi|395536735|ref|XP_003770367.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Sarcophilus
harrisii]
Length = 892
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 632 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSEVTVQNAEAYVLFYRKSSEEAQKE 685
>gi|432092405|gb|ELK25020.1| Ubiquitin carboxyl-terminal hydrolase 4 [Myotis davidii]
Length = 901
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 28/51 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTA+ + +W+YF+D V AY+LFY++RD++
Sbjct: 813 AMGVGHYTAHAKNKLNGKWYYFDDSNVSLASEDQIVTKAAYVLFYQRRDDE 863
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 38.9 bits (89), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 637 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEARKE 690
>gi|268571845|ref|XP_002641164.1| C. briggsae CBR-CYK-3 protein [Caenorhabditis briggsae]
Length = 1168
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 28/48 (58%), Gaps = 1/48 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GH+ AY N +W ND +V E ++ D AY+LFY+++D
Sbjct: 1120 LSCGHFIAYA-KSNEDKWLLLNDCSVREVSEEEVDKQGAYLLFYERKD 1166
>gi|195029733|ref|XP_001987726.1| GH19806 [Drosophila grimshawi]
gi|193903726|gb|EDW02593.1| GH19806 [Drosophila grimshawi]
Length = 920
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 8/66 (12%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK--------RDEDSD 60
V GHYT Y + W+ F+D+ V E P AY+LFY+K R+E +
Sbjct: 441 VGGGHYTCYARNTLNGRWYEFDDQHVTEVTPDVVQNCQAYVLFYQKHNPQMKLVREEAIN 500
Query: 61 VEVSGP 66
+ S P
Sbjct: 501 LSTSNP 506
>gi|353231357|emb|CCD77775.1| ubiquitin-specific peptidase 2 (C19 family) [Schistosoma mansoni]
Length = 563
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 23/47 (48%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
S V GHYTA L+P T +WH FND V Y+LFY
Sbjct: 513 SGSVYTGHYTASCLNPYTGDWHSFNDSHVHAISENSVVSAEGYVLFY 559
>gi|195426425|ref|XP_002061335.1| GK20778 [Drosophila willistoni]
gi|194157420|gb|EDW72321.1| GK20778 [Drosophila willistoni]
Length = 917
Score = 38.9 bits (89), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 26/48 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V GHYT Y + W+ F+D+ V E P+ AY+LFY+K +
Sbjct: 465 VGGGHYTCYARNSLNGRWYEFDDQFVTEVLPEVVQNCQAYVLFYQKHN 512
>gi|449688025|ref|XP_004211619.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 32-like [Hydra
magnipapillata]
Length = 299
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 29/50 (58%), Gaps = 1/50 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
++ GHY Y +PN K W+Y+ND + E P Y+LFY++++ D
Sbjct: 217 LNGGHYVTYAKNPNGK-WYYYNDSSCKEVNPSVLSNEIPYMLFYERQNLD 265
>gi|406603343|emb|CCH45135.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 815
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
S + GHYT+Y K+W YF+D +++ + N NAY+LFY +
Sbjct: 764 SGTLVGGHYTSYVWKGTNKKWCYFDDTRIVQNFTKTNVINSNAYVLFYTR 813
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 629 ASSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEARKE 682
>gi|171686156|ref|XP_001908019.1| hypothetical protein [Podospora anserina S mat+]
gi|170943039|emb|CAP68692.1| unnamed protein product [Podospora anserina S mat+]
Length = 1516
Score = 38.9 bits (89), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 1/51 (1%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKRDE 57
G+ GHYTA + N W+ +ND V + PQ AY+LFY++R E
Sbjct: 1203 GLGGGHYTAKAKNFNDGSWYEYNDTGVSKCSDPQKVVSAAAYLLFYRRRSE 1253
>gi|358333828|dbj|GAA52307.1| ubiquitin carboxyl-terminal hydrolase 4/11/15 [Clonorchis sinensis]
Length = 883
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
+ GHYTAY L+ T+ W+ F+D + + + Y+L Y++RD + + P
Sbjct: 776 LGGGHYTAYALNEPTQTWYLFDDASTRKVDESHIVSSAGYVLVYRRRDNECHTSSTMP 833
>gi|241949097|ref|XP_002417271.1| deubiquitinating enzyme 12, putative; ubiquitin carboxyl-terminal
hydrolase 12, putative; ubiquitin thiolesterase 12,
putative; ubiquitin-specific processing protease 12,
putative; ubiquitin-specific protease, putative [Candida
dubliniensis CD36]
gi|223640609|emb|CAX44887.1| deubiquitinating enzyme 12, putative [Candida dubliniensis CD36]
Length = 1309
Score = 38.9 bits (89), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 19/44 (43%), Positives = 28/44 (63%), Gaps = 1/44 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
HYTA + +W+YFND V E P++ N+AY+LFY++R
Sbjct: 1100 HYTASVKNFRDDKWYYFNDSRVTEINNPEEVVANSAYLLFYRRR 1143
>gi|145496599|ref|XP_001434290.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401414|emb|CAK66893.1| unnamed protein product [Paramecium tetraurelia]
Length = 532
Score = 38.9 bits (89), Expect = 0.44, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
GHY ++ +W+YF+D V R QD AYILF+++ DE
Sbjct: 484 GHYVNFSKIQVQLKWYYFDDHRVQFAREQDVLRQQAYILFFERSDE 529
>gi|328857175|gb|EGG06293.1| ubiquitin C-terminal hydrolase [Melampsora larici-populina 98AG31]
Length = 1423
Score = 38.9 bits (89), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKR 55
G+ GHYTA+ + +WH F+D V E ++ + AY+LFY++R
Sbjct: 1209 GLGGGHYTAFAKNATDGKWHNFDDSHVSEVDSAEKVKSSAAYLLFYRRR 1257
>gi|403339921|gb|EJY69221.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1228
Score = 38.9 bits (89), Expect = 0.45, Method: Composition-based stats.
Identities = 20/46 (43%), Positives = 27/46 (58%), Gaps = 1/46 (2%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKR 55
GHYTA+ +P T +W+ F+D V E N A Y+LFYK+R
Sbjct: 1182 GGHYTAFAQNPITSKWYEFDDSHVTEIGDVRRLVNKAGYVLFYKRR 1227
>gi|410076176|ref|XP_003955670.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
gi|372462253|emb|CCF56535.1| hypothetical protein KAFR_0B02370 [Kazachstania africana CBS 2517]
Length = 829
Score = 38.9 bits (89), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 29/53 (54%), Gaps = 8/53 (15%)
Query: 11 AGHYTAYTLHPNTKEWHYFND--------ETVLEQRPQDEDFNNAYILFYKKR 55
GHYTA LH +K+W+ +D + VL+ +D D AYIL Y+K+
Sbjct: 777 GGHYTADVLHSESKKWYRIDDVNINELEEDDVLKGGEEDNDSRTAYILMYQKK 829
>gi|348521632|ref|XP_003448330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like
[Oreochromis niloticus]
Length = 404
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 2/53 (3%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDV 61
V+ GHYTA L N W ++ND +V N AY+LFY++ + + V
Sbjct: 352 VNMGHYTACCLDENG--WCFYNDSSVTPLTENQLQTNQAYVLFYQRSNSTATV 402
>gi|339259260|ref|XP_003368991.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
gi|316964324|gb|EFV49485.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
Length = 250
Score = 38.5 bits (88), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR-------DEDSD 60
G+ +GHYTA+ + +TK W+ F+D V +D AY+L Y ++ + D D
Sbjct: 183 GLGSGHYTAFAKNCDTKRWYNFDDMHVSVVSEEDIVTKEAYVLIYLRQSKKVSPAESDVD 242
Query: 61 VEV 63
+EV
Sbjct: 243 MEV 245
>gi|320167056|gb|EFW43955.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 843
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 25/53 (47%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
KG+ AGHYT Y + W FND V+ + Y+LFY ++ S
Sbjct: 726 KGIIAGHYTNYCYDFESASWQLFNDHRVISATFAEVQAAQPYMLFYLRKGSAS 778
>gi|339236929|ref|XP_003380019.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
gi|316977237|gb|EFV60365.1| ubiquitin carboxyl- hydrolase 4 [Trichinella spiralis]
Length = 802
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 34/63 (53%), Gaps = 7/63 (11%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR-------DEDSD 60
G+ +GHYTA+ + +TK W+ F+D V +D AY+L Y ++ + D D
Sbjct: 735 GLGSGHYTAFAKNCDTKRWYNFDDMHVSVVSEEDIVTKEAYVLIYLRQSKKVSPAESDVD 794
Query: 61 VEV 63
+EV
Sbjct: 795 MEV 797
>gi|145475787|ref|XP_001423916.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124390977|emb|CAK56518.1| unnamed protein product [Paramecium tetraurelia]
Length = 522
Score = 38.5 bits (88), Expect = 0.47, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 27/45 (60%), Gaps = 2/45 (4%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQ--DEDFNNAYILFYKK 54
GHY A HP T +W+ ND +V E +P+ E N+AY+L Y +
Sbjct: 477 GHYFAECKHPFTMKWYQLNDSSVQEIKPKVSYESDNSAYLLLYSR 521
>gi|327276737|ref|XP_003223124.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 2
[Anolis carolinensis]
Length = 890
Score = 38.5 bits (88), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
GHY AY + W+ F+D++V E AY+LFY+K +E++ E
Sbjct: 621 GHYIAYCWNNLNNRWYEFDDQSVTEVTESTVQNAEAYVLFYRKSNEEAKRE 671
>gi|311977702|ref|YP_003986822.1| probable ubiquitin carboxyl-terminal hydrolase [Acanthamoeba
polyphaga mimivirus]
gi|81175098|sp|Q5UQR3.1|UBPL1_MIMIV RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase R319;
AltName: Full=Deubiquitinating enzyme R319; AltName:
Full=Ubiquitin thioesterase R319; AltName:
Full=Ubiquitin-specific-processing protease R319
gi|55416938|gb|AAV50588.1| putative ubiquitin-specific protease [Acanthamoeba polyphaga
mimivirus]
gi|308204753|gb|ADO18554.1| probable ubiquitin carboxyl-terminal hydrolase [Acanthamoeba
polyphaga mimivirus]
gi|339061255|gb|AEJ34559.1| putative ubiquitin-specific protease [Acanthamoeba polyphaga
mimivirus]
Length = 468
Score = 38.5 bits (88), Expect = 0.48, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G++ GHY Y+ NT EW+ FND + NAYILFY + D
Sbjct: 415 GLNNGHYFTYSKIENTGEWYEFNDTYTGKVTDNHIVNQNAYILFYIRSD 463
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY AY + W+ F+D++V + AY+LFY+K E++ E
Sbjct: 852 ASSGHYIAYCRNNLNNLWYEFDDQSVTQVSESTVQNAEAYVLFYRKSSEEAQKE 905
>gi|410924033|ref|XP_003975486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Takifugu
rubripes]
Length = 909
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
S+GHY AY + W+ F+D V E AY+LFYKK +E++
Sbjct: 636 ASSGHYIAYCRNDENNLWYEFDDHRVTEVSESCVQNAEAYVLFYKKSNEEA 686
>gi|123446361|ref|XP_001311932.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121893760|gb|EAX99002.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 749
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 29/49 (59%), Gaps = 2/49 (4%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
S +S GHYTA + ++W+ FND +V+ P D +AY++FY K
Sbjct: 640 SGTLSFGHYTA--IGKRGEKWYSFNDSSVIPTTPPDGTSASAYVVFYAK 686
>gi|108862978|gb|ABA99902.2| Ubiquitin carboxyl-terminal hydrolase family protein, expressed
[Oryza sativa Japonica Group]
Length = 801
Score = 38.5 bits (88), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY H K W+ F+D V + + AY+LFY++ D
Sbjct: 734 MGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSAAYVLFYRRIQGD 783
>gi|327276735|ref|XP_003223123.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like isoform 1
[Anolis carolinensis]
Length = 897
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
GHY AY + W+ F+D++V E AY+LFY+K +E++ E
Sbjct: 628 GHYIAYCWNNLNNRWYEFDDQSVTEVTESTVQNAEAYVLFYRKSNEEAKRE 678
>gi|123509389|ref|XP_001329851.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121912900|gb|EAY17716.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 1975
Score = 38.5 bits (88), Expect = 0.49, Method: Composition-based stats.
Identities = 21/61 (34%), Positives = 33/61 (54%), Gaps = 9/61 (14%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQD-------EDFNNAYILFYKKR--DEDSDVE 62
GHY +Y T++W YFND+ V E D + +AY+LFY K + ++D+E
Sbjct: 1273 GHYVSYVRDRFTQKWTYFNDDQVSEISENDVLQTSYGSNTRSAYLLFYDKEGIEYENDIE 1332
Query: 63 V 63
+
Sbjct: 1333 I 1333
>gi|390597718|gb|EIN07117.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 980
Score = 38.5 bits (88), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 29/59 (49%), Gaps = 13/59 (22%)
Query: 9 VSAGHYTAYTLHPN-------TKEWHYFNDETVLEQRPQD------EDFNNAYILFYKK 54
S GHYT LHPN + W +DE V + RP+D D AY+LFY+K
Sbjct: 915 ASGGHYTLDVLHPNRDLSTKPREAWIRIDDELVSDIRPEDVFGGQERDDRCAYLLFYRK 973
>gi|351737473|gb|AEQ60508.1| putative ubiquitin-specific protease [Acanthamoeba castellanii
mamavirus]
gi|398257159|gb|EJN40767.1| putative ubiquitin-specific protease [Acanthamoeba polyphaga
lentillevirus]
Length = 468
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G++ GHY Y+ NT EW+ FND + NAYILFY + D
Sbjct: 415 GLNNGHYFTYSKIENTGEWYEFNDTYTGKVADNHIVNQNAYILFYIRSD 463
>gi|449471572|ref|XP_002196987.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 343
Score = 38.5 bits (88), Expect = 0.51, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
GHYTA+ H TK W+ F+D+ V + + AY+LFY
Sbjct: 298 GHYTAFCKHSITKHWYSFDDDQVTKIPDSAVQADTAYLLFY 338
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 38.5 bits (88), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRD 56
V G GHYTA+ +H +W +FND +V RP D YILFY +R+
Sbjct: 546 VHHGSGAGTGHYTAFAVHDG--QWFHFNDSSV---RPATTDAVAKCKPYILFYVRRE 597
>gi|294955878|ref|XP_002788725.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239904266|gb|EER20521.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 816
Score = 38.5 bits (88), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+R V +GHY AY H T EW ++D V + AY+LFY+K
Sbjct: 442 IRHIGSVGSGHYVAYCRHEETDEWLEYDDARVTKVDSAQVAGFEAYVLFYQK 493
>gi|219124126|ref|XP_002182362.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406323|gb|EEC46263.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 641
Score = 38.5 bits (88), Expect = 0.52, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 25/49 (51%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+S GHY A +W FND + E +D +AYILFY +RD
Sbjct: 556 ALSGGHYVASLKSEFDGQWRLFNDAQIYEIHDRDVVDASAYILFYIRRD 604
>gi|332022861|gb|EGI63134.1| Ubiquitin carboxyl-terminal hydrolase 3 [Acromyrmex echinatior]
Length = 92
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRD 56
+ V G GHYTA+ +H +W +FND +V RP D YILFY +R+
Sbjct: 32 VIVHHGSGAGTGHYTAFAVHDG--QWFHFNDSSV---RPATTDAVAKCKPYILFYVRRE 85
>gi|66820366|ref|XP_643807.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
gi|74893995|sp|O96612.1|UBPB_DICDI RecName: Full=Ubiquitin hydrolase B
gi|4028549|gb|AAC97115.1| ubiquitin hydrolase B [Dictyostelium discoideum]
gi|60471837|gb|EAL69791.1| ubiquitin hydrolase B [Dictyostelium discoideum AX4]
Length = 451
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
+G+S GHYT P +W ++D T E + QD AY+L Y+
Sbjct: 402 RGLSQGHYTCDIYQPQQAQWIRYDDSTFTEVKEQDVLNREAYLLLYQ 448
>gi|307168098|gb|EFN61396.1| Ubiquitin carboxyl-terminal hydrolase 3 [Camponotus floridanus]
Length = 92
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 30/59 (50%), Gaps = 8/59 (13%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRD 56
+ V G GHYTA+ +H +W +FND +V RP D YILFY +R+
Sbjct: 32 VIVHHGSGAGTGHYTAFAVHDG--QWFHFNDSSV---RPATTDAVAKCKPYILFYVRRE 85
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 38.5 bits (88), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 24/50 (48%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V GV +GHY AY H W +FND TV + AYILFY
Sbjct: 417 VHHGSGVGSGHYIAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|123456351|ref|XP_001315912.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121898603|gb|EAY03689.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 849
Score = 38.5 bits (88), Expect = 0.53, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%), Gaps = 1/49 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
+ AGHY+A+ + W FN++ P+ NNAYI+FY++ DE
Sbjct: 802 IGAGHYSAHA-KIDAVTWAEFNEKQAYRCTPEAAHQNNAYIIFYQRVDE 849
>gi|147899880|ref|NP_001082452.1| ubiquitin specific peptidase 4 (proto-oncogene) [Xenopus laevis]
gi|84570095|gb|AAI10726.1| LOC398480 protein [Xenopus laevis]
Length = 975
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDED---FNNAYILFYKKRDEDSDVEVSGP 66
HYTAY + + +W+YF+D +V P ED AY+LFY+++D + D + S P
Sbjct: 898 HYTAYAKNQDKDQWYYFDDSSV---SPASEDQIVTKAAYVLFYQRQD-NVDCKNSSP 950
>gi|219119288|ref|XP_002180407.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407880|gb|EEC47815.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 348
Score = 38.5 bits (88), Expect = 0.55, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETV--LEQRPQDEDFNNAYILFYKK 54
+ GHYTAY+L+ W+ FND T ++ R + ++AY+LFY +
Sbjct: 301 LGGGHYTAYSLNRFDDHWYEFNDTTCRKIDDRTLQGNSSSAYLLFYNR 348
>gi|119911941|ref|XP_583534.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Bos taurus]
gi|297486804|ref|XP_002695928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43 [Bos taurus]
gi|296476683|tpg|DAA18798.1| TPA: ubiquitin specific peptidase 43 [Bos taurus]
Length = 1121
Score = 38.5 bits (88), Expect = 0.55, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D V + + AYILFY+KR+
Sbjct: 664 LQGGHYTAYCRNSLDGQWYSYDDSMVEPLLEDEVNTRGAYILFYQKRN 711
>gi|27503316|gb|AAH42353.1| LOC398480 protein [Xenopus laevis]
Length = 973
Score = 38.5 bits (88), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%), Gaps = 7/57 (12%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDED---FNNAYILFYKKRDEDSDVEVSGP 66
HYTAY + + +W+YF+D +V P ED AY+LFY+++D + D + S P
Sbjct: 896 HYTAYAKNQDKDQWYYFDDSSV---SPASEDQIVTKAAYVLFYQRQD-NVDCKNSSP 948
>gi|440895595|gb|ELR47745.1| Ubiquitin carboxyl-terminal hydrolase 43, partial [Bos grunniens
mutus]
Length = 1047
Score = 38.5 bits (88), Expect = 0.57, Method: Composition-based stats.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTAY + +W+ ++D V + + AYILFY+KR+
Sbjct: 573 LQGGHYTAYCRNSLDGQWYSYDDSMVEPLLEDEVNTRGAYILFYQKRN 620
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
V G AGHY A+ + N +W+ FND TV + AYILFY
Sbjct: 434 VHQGSGAGAGHYIAFAV--NNGQWYCFNDSTVTPVEEKVITRCKAYILFY 481
>gi|294898802|ref|XP_002776382.1| hypothetical protein Pmar_PMAR013108 [Perkinsus marinus ATCC 50983]
gi|239883320|gb|EER08198.1| hypothetical protein Pmar_PMAR013108 [Perkinsus marinus ATCC 50983]
Length = 667
Score = 38.5 bits (88), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 26/52 (50%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+R V +GHY AY H T EW ++D V + AY+LFY+K
Sbjct: 460 IRHIGSVGSGHYVAYCRHEETDEWLEYDDARVTKVDSAQVAGFEAYVLFYQK 511
>gi|268562253|ref|XP_002638549.1| Hypothetical protein CBG05585 [Caenorhabditis briggsae]
Length = 357
Score = 38.5 bits (88), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 27/46 (58%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+++GHYT+ H +WH ++DETV + AYILFYK+
Sbjct: 311 LNSGHYTSVASHLRNDKWHRYDDETVTPCEKFQVNPQLAYILFYKR 356
>gi|340508790|gb|EGR34421.1| ubiquitin specific peptidase 31, putative [Ichthyophthirius
multifiliis]
Length = 550
Score = 38.5 bits (88), Expect = 0.59, Method: Composition-based stats.
Identities = 19/47 (40%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
++ GHYTA+ N +W FND V + +D + AYILFY+K+
Sbjct: 505 LNGGHYTAFAF--NQDKWWLFNDSEVKQVNEKDVCTDQAYILFYQKK 549
>gi|324501057|gb|ADY40477.1| Ubiquitin carboxyl-terminal hydrolase 32 [Ascaris suum]
Length = 1248
Score = 38.1 bits (87), Expect = 0.60, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 27/49 (55%), Gaps = 2/49 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+++GHY AY N +W+ FND + D +AY+LFY++ D
Sbjct: 1201 AMASGHYVAYA--RNRDQWYAFNDSRCQAVKESQIDKKSAYLLFYERAD 1247
>gi|321453276|gb|EFX64527.1| hypothetical protein DAPPUDRAFT_66136 [Daphnia pulex]
Length = 294
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 19/48 (39%), Positives = 26/48 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ AGHYTAY + +W F+D+ V+E + AYILFY D
Sbjct: 238 MDAGHYTAYCKNAEYNKWFKFDDQDVMEISGNEVRSAAAYILFYTAID 285
>gi|222617496|gb|EEE53628.1| hypothetical protein OsJ_36905 [Oryza sativa Japonica Group]
Length = 882
Score = 38.1 bits (87), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY H K W+ F+D V + + AY+LFY++ D
Sbjct: 815 MGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSAAYVLFYRRIQGD 864
>gi|297613547|ref|NP_001067298.2| Os12g0621000 [Oryza sativa Japonica Group]
gi|255670491|dbj|BAF30317.2| Os12g0621000 [Oryza sativa Japonica Group]
Length = 864
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY H K W+ F+D V + + AY+LFY++ D
Sbjct: 797 MGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSAAYVLFYRRIQGD 846
>gi|189217810|ref|NP_001121345.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus laevis]
gi|281312478|sp|B1WBD7.1|UBP20_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|171846441|gb|AAI61716.1| LOC100158436 protein [Xenopus laevis]
Length = 840
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY +Y + +W+ F+D+ V E AY+LFY+K E+++ E
Sbjct: 565 ASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEEAERE 618
>gi|440804466|gb|ELR25343.1| Ubiquitin carboxylterminal hydrolase 15, putative [Acanthamoeba
castellanii str. Neff]
Length = 1164
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 31/52 (59%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
+ GHYTAY + +W+ F+D +V + + + AY+LFY+ +++ S+
Sbjct: 1044 LGGGHYTAYAKNHRENKWYKFDDSSVSSVQAESVKTSAAYVLFYRLKEDASE 1095
>gi|218187268|gb|EEC69695.1| hypothetical protein OsI_39158 [Oryza sativa Indica Group]
Length = 868
Score = 38.1 bits (87), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTAY H K W+ F+D V + + AY+LFY++ D
Sbjct: 801 MGGGHYTAYVYHEGKKGWYDFDDRHVGPISEESIKTSAAYVLFYRRIQGD 850
>gi|147827031|emb|CAN59992.1| hypothetical protein VITISV_009778 [Vitis vinifera]
Length = 1670
Score = 38.1 bits (87), Expect = 0.62, Method: Composition-based stats.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVS 64
G+ +GHYTA+ + W+ F+D + +D AY+LFYK+ D D VS
Sbjct: 1556 GMGSGHYTAHIKLLDENRWYNFDDSHISAINEEDVKSAAAYVLFYKRVKID-DASVS 1611
>gi|114145459|ref|NP_001041464.1| zinc finger protein 3 [Ciona intestinalis]
gi|93003314|tpd|FAA00240.1| TPA: zinc finger protein [Ciona intestinalis]
Length = 993
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 28/60 (46%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
+G +GHYTAY + K W + ND + D AYILFY +R D S P
Sbjct: 912 RGFGSGHYTAYCWNDIGKFWVHCNDSNLELCSIDDVMAAQAYILFYSQRGLDPHPHFSAP 971
>gi|310831447|ref|YP_003970090.1| putative ubiquitin carboxyl-terminal hydrolase [Cafeteria
roenbergensis virus BV-PW1]
gi|309386631|gb|ADO67491.1| putative ubiquitin carboxyl-terminal hydrolase [Cafeteria
roenbergensis virus BV-PW1]
Length = 356
Score = 38.1 bits (87), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDE-TVLEQRPQDEDFNNAYILFYKKRD 56
G SAGHY +Y + W+ +ND+ T ++ P + ++AY+LFY ++D
Sbjct: 307 GFSAGHYVSYVKNRTDNNWYLYNDDHTPIKIEPTNIINSSAYLLFYARKD 356
>gi|358339105|dbj|GAA30975.2| ubiquitin carboxyl-terminal hydrolase 20/33 [Clonorchis sinensis]
Length = 967
Score = 38.1 bits (87), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 31/47 (65%), Gaps = 4/47 (8%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQ---DEDFNNAYILFYKKRD 56
HY Y+L+ T+ W+ F+D+ V Q P ++ ++AYILFY+KRD
Sbjct: 448 HYVTYSLNAYTQSWYEFDDDHV-TQVPAFHVEQLTSDAYILFYRKRD 493
>gi|67540368|ref|XP_663958.1| hypothetical protein AN6354.2 [Aspergillus nidulans FGSC A4]
gi|40739548|gb|EAA58738.1| hypothetical protein AN6354.2 [Aspergillus nidulans FGSC A4]
gi|259479427|tpe|CBF69639.1| TPA: ubiquitin C-terminal hydrolase, putative (AFU_orthologue;
AFUA_2G14130) [Aspergillus nidulans FGSC A4]
Length = 1418
Score = 38.1 bits (87), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQ-RPQDEDFNNAYILFYKKRDE 57
HYTAY + T +W+ +ND +V PQ+ ++AY+LFY++R +
Sbjct: 1146 HYTAYAKNFMTGQWNEYNDSSVSRPIDPQNAVTSSAYLLFYRRRSD 1191
>gi|326434363|gb|EGD79933.1| hypothetical protein PTSG_10215 [Salpingoeca sp. ATCC 50818]
Length = 1785
Score = 38.1 bits (87), Expect = 0.67, Method: Composition-based stats.
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKK 54
V GHYTA HP +K+W ND ++ P +AY+LFY +
Sbjct: 1735 VHGGHYTALCRHPVSKQWFNCNDASISTIDTPSPSRLQHAYLLFYHR 1781
>gi|148233102|ref|NP_001090641.1| ubiquitin carboxyl-terminal hydrolase 20 [Xenopus (Silurana)
tropicalis]
gi|281312479|sp|A0JM59.1|UBP20_XENTR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|117557978|gb|AAI25750.1| usp20 protein [Xenopus (Silurana) tropicalis]
Length = 884
Score = 38.1 bits (87), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
S+GHY +Y + +W+ F+D+ V E AY+LFY+K E+++ E
Sbjct: 609 ASSGHYISYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEEAERE 662
>gi|441432438|ref|YP_007354480.1| peptidase C19 subfamily protein [Acanthamoeba polyphaga
moumouvirus]
gi|440383518|gb|AGC02044.1| peptidase C19 subfamily protein [Acanthamoeba polyphaga
moumouvirus]
Length = 442
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G++ GHY Y L N +W+ FND+ V + +AY+LFY ++D
Sbjct: 391 GLNHGHYFTYNLDINMDKWYVFNDDMVSPISHERVITPSAYLLFYVRQD 439
>gi|407033660|gb|EKE36929.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 1298
Score = 38.1 bits (87), Expect = 0.69, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 15/64 (23%)
Query: 9 VSAGHYTAYTLHP-NTKEWHYFNDETV--------------LEQRPQDEDFNNAYILFYK 53
V+ GHY +Y L+P N +W YFND+ V ++ ++E + AYIL Y+
Sbjct: 878 VNIGHYISYVLNPENNIDWIYFNDDKVEKISWYNFNIQQKCFGKKDKNEYISTAYILIYQ 937
Query: 54 KRDE 57
K+ +
Sbjct: 938 KQSK 941
>gi|308487927|ref|XP_003106158.1| CRE-USP-33 protein [Caenorhabditis remanei]
gi|308254148|gb|EFO98100.1| CRE-USP-33 protein [Caenorhabditis remanei]
Length = 978
Score = 38.1 bits (87), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 29/55 (52%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
V + + GHY ++ L+ +W++++D TV + N YIL Y+KR +
Sbjct: 545 VHVGRNIDCGHYVSFCLNEQENQWYHYDDSTVTRYDDTEVAKNEPYILMYRKRQD 599
>gi|145537628|ref|XP_001454525.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422291|emb|CAK87128.1| unnamed protein product [Paramecium tetraurelia]
Length = 472
Score = 38.1 bits (87), Expect = 0.70, Method: Composition-based stats.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
S + +GHYT+ + +T++W+ F+D + E ++ ++AY+LFY K DS
Sbjct: 331 SGTLHSGHYTSNCKNKDTQKWYNFDDTRIKEIMEKEVLTSDAYLLFYYKNSVDS 384
>gi|298715315|emb|CBJ34030.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 316
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
V GHYTA + + +W+ FNDE V + +AY+LFY K
Sbjct: 36 VHGGHYTATAKNRVSGDWNLFNDERVEGLEANEVQAASAYVLFYTK 81
>gi|432865793|ref|XP_004070616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Oryzias
latipes]
Length = 1552
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY P+ K W F+D TV AY+LFY++R+
Sbjct: 1424 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVEESQVVTRYAYVLFYRRRN 1479
>gi|326679111|ref|XP_689922.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Danio rerio]
Length = 1526
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY P+ K W F+D TV AY+LFY++R+
Sbjct: 1349 GMIGGHYTAYARLPSDKNSQLSDVGWRLFDDSTVTTVEESQVVTRYAYVLFYRRRN 1404
>gi|222636464|gb|EEE66596.1| hypothetical protein OsJ_23160 [Oryza sativa Japonica Group]
Length = 885
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN---AYILFYKK 54
+ GHYTA H K W+ F+DE V RP ED AY+LFY++
Sbjct: 839 MGGGHYTASIYHEEGKGWYKFDDECV---RPITEDSIKTPAAYVLFYRR 884
>gi|218199123|gb|EEC81550.1| hypothetical protein OsI_24972 [Oryza sativa Indica Group]
Length = 885
Score = 38.1 bits (87), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 6/49 (12%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN---AYILFYKK 54
+ GHYTA H K W+ F+DE V RP ED AY+LFY++
Sbjct: 839 MGGGHYTASIYHEEGKGWYKFDDECV---RPITEDSIKTPAAYVLFYRR 884
>gi|444517773|gb|ELV11787.1| Ubiquitin carboxyl-terminal hydrolase 20 [Tupaia chinensis]
Length = 752
Score = 38.1 bits (87), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 29/55 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEV 63
+GHY AY + +W+ F+D+ V E AY+LFY+K E++ +V
Sbjct: 480 AGSGHYVAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEEAGQQV 534
>gi|123976172|ref|XP_001314464.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
gi|121896814|gb|EAY01954.1| Clan CA, family C19, ubiquitin hydrolase-like cysteine peptidase
[Trichomonas vaginalis G3]
Length = 736
Score = 38.1 bits (87), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDED-FNNAYILFYKK 54
S + GHYTA H T +W+ NDE + +E+ N +Y+LFY+K
Sbjct: 685 SSVATFGHYTAVVKHSQTGQWYIANDENISVYDSINENMINKSYVLFYQK 734
>gi|449512111|ref|XP_002200230.2| PREDICTED: putative ubiquitin carboxyl-terminal hydrolase 50-like
[Taeniopygia guttata]
Length = 262
Score = 38.1 bits (87), Expect = 0.75, Method: Composition-based stats.
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
GHYTA+ H TK W+ F+D+ V + + AY+LFY
Sbjct: 217 GHYTAFCKHSITKHWYSFDDDQVTKIPDSAVQADTAYLLFY 257
>gi|326928027|ref|XP_003210186.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Meleagris
gallopavo]
Length = 1426
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 30/65 (46%), Gaps = 7/65 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
G+ GHYTAY P+ K W F+D TV AY+LFY++R+ +
Sbjct: 1266 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRNSPVE 1325
Query: 61 VEVSG 65
+ G
Sbjct: 1326 RPLPG 1330
>gi|149247252|ref|XP_001528040.1| hypothetical protein LELG_00560 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447994|gb|EDK42382.1| hypothetical protein LELG_00560 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1442
Score = 38.1 bits (87), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKRDEDSDV 61
HYTA + +W+YFND V E P++ + AY+LFY+KR ++D+
Sbjct: 1226 HYTASVKNFCDDKWYYFNDSRVTEISDPEEVITSAAYLLFYRKRAPNADL 1275
>gi|371944853|gb|AEX62674.1| putative ubiquitin carboxyl-terminal hydrolase [Moumouvirus Monve]
Length = 442
Score = 38.1 bits (87), Expect = 0.76, Method: Composition-based stats.
Identities = 18/49 (36%), Positives = 28/49 (57%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G++ GHY Y L N +W+ FND+ V + +AY+LFY ++D
Sbjct: 391 GLNHGHYFTYNLDINMDKWYVFNDDMVSPISHERVITPSAYLLFYVRQD 439
>gi|164429141|ref|XP_956165.2| hypothetical protein NCU00480 [Neurospora crassa OR74A]
gi|157072425|gb|EAA26929.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1754
Score = 38.1 bits (87), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + +W+ FND +V + + + AY+LFY++R SD + GP
Sbjct: 1446 GLGGGHYTAFAKNFVDDQWYEFNDSSVSKVTDTSKVVSPAAYLLFYRRR---SDKPLGGP 1502
>gi|301614077|ref|XP_002936515.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 1
[Xenopus (Silurana) tropicalis]
Length = 975
Score = 37.7 bits (86), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDED---FNNAYILFYKKRD 56
HYTAY + + +W+YF+D +V P ED AY+LFY+++D
Sbjct: 898 HYTAYAKNQDKGQWYYFDDSSV---SPASEDQIVTKAAYVLFYQRQD 941
>gi|167527071|ref|XP_001747868.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773617|gb|EDQ87255.1| predicted protein [Monosiga brevicollis MX1]
Length = 900
Score = 37.7 bits (86), Expect = 0.79, Method: Composition-based stats.
Identities = 18/33 (54%), Positives = 20/33 (60%), Gaps = 2/33 (6%)
Query: 7 KGVSA--GHYTAYTLHPNTKEWHYFNDETVLEQ 37
+G SA GHY A HP T +W FNDE V EQ
Sbjct: 398 RGSSATCGHYMAQIRHPKTGKWFLFNDEEVTEQ 430
>gi|410902827|ref|XP_003964895.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like [Takifugu
rubripes]
Length = 1272
Score = 37.7 bits (86), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
GHYTAY + +W+ F+D V +D AYILFY++R
Sbjct: 685 GGHYTAYCRNSIDGQWYCFDDSEVSPVADEDVCQQTAYILFYQRR 729
>gi|260800015|ref|XP_002594932.1| hypothetical protein BRAFLDRAFT_277684 [Branchiostoma floridae]
gi|229280170|gb|EEN50943.1| hypothetical protein BRAFLDRAFT_277684 [Branchiostoma floridae]
Length = 697
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 28/53 (52%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+G +GHYTAY + W +FND + +D AYILFY ++ + +
Sbjct: 588 RGFGSGHYTAYCWNDEAGFWVHFNDSRLDLSSIEDVVAGQAYILFYVQKQKRA 640
>gi|403413657|emb|CCM00357.1| predicted protein [Fibroporia radiculosa]
Length = 1285
Score = 37.7 bits (86), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY + T +W++F+D V +P+ NAY+LFYK+R
Sbjct: 1036 YRAYAYNDTTDKWYHFDDSYVSPVQPEAAVNANAYLLFYKRR 1077
>gi|366997123|ref|XP_003678324.1| hypothetical protein NCAS_0I03140 [Naumovozyma castellii CBS 4309]
gi|342304195|emb|CCC71982.1| hypothetical protein NCAS_0I03140 [Naumovozyma castellii CBS 4309]
Length = 1201
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY + +W+YF+D V E ++ AY+LFY +R
Sbjct: 1002 HYTAYAKNSTDGKWYYFDDSRVTETVAENSITGAAYLLFYLRR 1044
>gi|126297738|ref|XP_001364410.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Monodelphis
domestica]
Length = 908
Score = 37.7 bits (86), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 29/54 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
+GHY AY + +W+ F+D+ V E AY+LFY+K E++ +E
Sbjct: 633 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEEAVME 686
>gi|405960113|gb|EKC26060.1| Ubiquitin carboxyl-terminal hydrolase 15 [Crassostrea gigas]
Length = 923
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 25/43 (58%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY + + EW+YF+D +V D AY+L Y+K+
Sbjct: 854 HYTAYAKNKDDGEWYYFDDSSVTSSSEDDVVSKAAYVLVYQKQ 896
>gi|336470026|gb|EGO58188.1| hypothetical protein NEUTE1DRAFT_122471 [Neurospora tetrasperma FGSC
2508]
Length = 1744
Score = 37.7 bits (86), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKKRDEDSDVEVSGP 66
G+ GHYTA+ + +W+ FND +V + + + AY+LFY++R SD + GP
Sbjct: 1436 GLGGGHYTAFAKNFVDDQWYEFNDSSVSKVTDTSKVVSPAAYLLFYRRR---SDKPLGGP 1492
>gi|224070126|ref|XP_002196148.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Taeniopygia
guttata]
Length = 1135
Score = 37.7 bits (86), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTAY + +W+ F+D V + + AYILFY++R
Sbjct: 512 MQGGHYTAYCKNSVDGQWYCFDDSEVQQLSESEVCKQTAYILFYQRR 558
>gi|156846814|ref|XP_001646293.1| hypothetical protein Kpol_1032p28 [Vanderwaltozyma polyspora DSM
70294]
gi|239977663|sp|A7TGY3.1|UBP4_VANPO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; AltName: Full=Ubiquitin
thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|156116968|gb|EDO18435.1| hypothetical protein Kpol_1032p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 882
Score = 37.7 bits (86), Expect = 0.84, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%), Gaps = 1/45 (2%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
GHYTAY + WHYF+D + + + E NAY+LFY +
Sbjct: 834 GGHYTAYVNKGINRGWHYFDDTSYRPIKNETECITPNAYVLFYHR 878
>gi|301614079|ref|XP_002936516.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like isoform 2
[Xenopus (Silurana) tropicalis]
Length = 933
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 6/47 (12%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDED---FNNAYILFYKKRD 56
HYTAY + + +W+YF+D +V P ED AY+LFY+++D
Sbjct: 856 HYTAYAKNQDKGQWYYFDDSSV---SPASEDQIVTKAAYVLFYQRQD 899
>gi|189517300|ref|XP_692912.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31 [Danio rerio]
Length = 1295
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 27/47 (57%), Gaps = 4/47 (8%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF--NNAYILFYKKR 55
GHYTAY + +W+ F+D V Q DED AYILFY++R
Sbjct: 692 GGHYTAYCKNSIDGQWYCFDDSEV--QPVADEDVCQQTAYILFYQRR 736
>gi|158285368|ref|XP_308272.4| AGAP007600-PA [Anopheles gambiae str. PEST]
gi|157019958|gb|EAA03924.4| AGAP007600-PA [Anopheles gambiae str. PEST]
Length = 1227
Score = 37.7 bits (86), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 32/59 (54%), Gaps = 4/59 (6%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVL---EQRPQDEDFNN-AYILFYKKR 55
+C + GHYTA +P +W+ F+D+ V R +E NN AY+LFY++R
Sbjct: 757 VCYHQGDTLETGHYTAACKNPYDGQWYRFDDQRVSHVPNDRIDEEIINNEAYLLFYQRR 815
>gi|50292819|ref|XP_448842.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528155|emb|CAG61812.1| unnamed protein product [Candida glabrata]
Length = 1147
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 27/46 (58%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
HYT+Y + W+YF+D V P+ +AY+LFY KR+++
Sbjct: 951 HYTSYVKNNIDNRWYYFDDSRVSSTDPKKSVAGSAYLLFYCKREQN 996
>gi|390594434|gb|EIN03845.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 218
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+S+GHYTA+ N +W Y +D V++ P++ AY+LFYK+
Sbjct: 172 LSSGHYTAFISSRN--QWLYCDDSRVVQADPKEVVGKPAYVLFYKR 215
>gi|390357033|ref|XP_003728913.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 44-like
[Strongylocentrotus purpuratus]
Length = 243
Score = 37.7 bits (86), Expect = 0.86, Method: Composition-based stats.
Identities = 19/55 (34%), Positives = 28/55 (50%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ + +G +GHYTAY+ + W + ND + +D AYILFY KR
Sbjct: 151 LVIHHGRGFGSGHYTAYSWNQEGGFWVHCNDARLELCSVEDVTACQAYILFYTKR 205
>gi|351709928|gb|EHB12847.1| U4/U6.U5 tri-snRNP-associated protein 2 [Heterocephalus glaber]
Length = 565
Score = 37.7 bits (86), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
S G Y + LH T +W+ D V + PQ + AYI +K+RD D DV G
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND-DVNQQG 564
>gi|291000604|ref|XP_002682869.1| ubiquitin-specific processing protease [Naegleria gruberi]
gi|284096497|gb|EFC50125.1| ubiquitin-specific processing protease [Naegleria gruberi]
Length = 1073
Score = 37.7 bits (86), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+ GHY +Y + W+ FND +V ++ +NAY+LFY+++
Sbjct: 1013 GLYGGHYYSYAKNCEDSRWYCFNDSSVSPLTEKELKTSNAYMLFYQRK 1060
>gi|449705514|gb|EMD45543.1| ubiquitin carboxylterminal hydrolase domain containing protein
[Entamoeba histolytica KU27]
Length = 1298
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 15/64 (23%)
Query: 9 VSAGHYTAYTLHP-NTKEWHYFNDETV--------------LEQRPQDEDFNNAYILFYK 53
V+ GHY +Y L+P N +W YFND+ V ++ ++E + AYIL Y+
Sbjct: 878 VNIGHYISYILNPENNIDWIYFNDDKVEKISWYNFNIQQKCFGKKDKNEYISTAYILIYQ 937
Query: 54 KRDE 57
K+ +
Sbjct: 938 KQSK 941
>gi|38259220|ref|NP_940813.1| ubiquitin carboxyl-terminal hydrolase 49 [Mus musculus]
gi|52000870|sp|Q6P9L4.1|UBP49_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 49; AltName:
Full=Deubiquitinating enzyme 49; AltName: Full=Ubiquitin
thioesterase 49; AltName:
Full=Ubiquitin-specific-processing protease 49
gi|38174228|gb|AAH60712.1| Ubiquitin specific peptidase 49 [Mus musculus]
Length = 685
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
KG +GHYTAY + W + ND + ++ AYILFY +R ++S P
Sbjct: 606 KGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAYILFYTRRTVQGSAKLSEP 665
>gi|348566421|ref|XP_003469000.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cavia
porcellus]
Length = 565
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
S G Y + LH T +W+ D V + PQ + AYI +K+RD D DV G
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND-DVNQQG 564
>gi|321473066|gb|EFX84034.1| hypothetical protein DAPPUDRAFT_187802 [Daphnia pulex]
Length = 495
Score = 37.7 bits (86), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 27/55 (49%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVS 64
+ G Y + LH T +W D V E PQ AYI +++ E SDVE+S
Sbjct: 440 TKGTYRVHILHKATGKWFEMQDLHVTEILPQMITLTEAYIQIWEQSTERSDVEMS 494
>gi|145520625|ref|XP_001446168.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124413645|emb|CAK78771.1| unnamed protein product [Paramecium tetraurelia]
Length = 1160
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 24/43 (55%), Gaps = 1/43 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY +P W FND V E R + AY+LFY++R
Sbjct: 1116 HYTAYAKNPMYNAWFDFNDSQVKELRSSPVT-DAAYVLFYRRR 1157
>gi|67467174|ref|XP_649707.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
gi|56466198|gb|EAL44321.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba histolytica HM-1:IMSS]
Length = 1298
Score = 37.7 bits (86), Expect = 0.88, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 15/64 (23%)
Query: 9 VSAGHYTAYTLHP-NTKEWHYFNDETV--------------LEQRPQDEDFNNAYILFYK 53
V+ GHY +Y L+P N +W YFND+ V ++ ++E + AYIL Y+
Sbjct: 878 VNIGHYISYILNPENNIDWIYFNDDKVEKISWYNFNIQQKCFGKKDKNEYISTAYILIYQ 937
Query: 54 KRDE 57
K+ +
Sbjct: 938 KQSK 941
>gi|444727561|gb|ELW68047.1| Ubiquitin carboxyl-terminal hydrolase 33 [Tupaia chinensis]
Length = 777
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
+ GHY AY + W+ F+D++V E AY+LFY+K E++ E
Sbjct: 504 LKGGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 557
>gi|5002571|emb|CAB44337.1| LSFR3 protein [Takifugu rubripes]
Length = 390
Score = 37.7 bits (86), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 27/50 (54%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E+S
Sbjct: 118 GSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEES 167
>gi|410903724|ref|XP_003965343.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Takifugu
rubripes]
Length = 937
Score = 37.7 bits (86), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E+S
Sbjct: 664 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEES 714
>gi|327264818|ref|XP_003217208.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 43-like [Anolis
carolinensis]
Length = 990
Score = 37.7 bits (86), Expect = 0.91, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 25/47 (53%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTAY + W+ ++D TV + AYILFY++R
Sbjct: 542 MQGGHYTAYCRNALDGHWYSYDDSTVEAVLEDEVSTRGAYILFYQRR 588
>gi|402592599|gb|EJW86527.1| ubiquitin carboxyl-terminal hydrolase, partial [Wuchereria
bancrofti]
Length = 524
Score = 37.7 bits (86), Expect = 0.92, Method: Composition-based stats.
Identities = 17/49 (34%), Positives = 26/49 (53%), Gaps = 2/49 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+++GHY AY N +W FND + D +AY+LFY++ D
Sbjct: 478 AMASGHYVAYA--KNNNQWFSFNDSRCQAVKEPHVDKKSAYLLFYERMD 524
>gi|281312477|sp|A5PN09.1|UBP20_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; AltName: Full=Ubiquitin
thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
Length = 911
Score = 37.7 bits (86), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E+S
Sbjct: 639 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEES 689
>gi|448530478|ref|XP_003870072.1| Dot4 protein [Candida orthopsilosis Co 90-125]
gi|380354426|emb|CCG23941.1| Dot4 protein [Candida orthopsilosis]
Length = 748
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETV--LEQRPQDEDFNNAYILFYKK 54
+ V + +S+GHY + L P+ W ++DE + +++R D NAY+L Y K
Sbjct: 690 VIVHEGRSISSGHYICHVLQPDGTSWSTYDDEYINRIDERKALSDA-NAYVLVYTK 744
>gi|158966727|ref|NP_957281.2| ubiquitin carboxyl-terminal hydrolase 20 [Danio rerio]
gi|148725228|emb|CAN88088.1| ubiquitin specific protease 20 [Danio rerio]
gi|148725501|emb|CAN88765.1| ubiquitin specific protease 20 [Danio rerio]
Length = 913
Score = 37.7 bits (86), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E+S
Sbjct: 639 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQNAEAYVLFYRKSSEES 689
>gi|403346439|gb|EJY72618.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1418
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
++ GHYTA+ +P K W+ F+D V +Y+LFY++R +
Sbjct: 1368 SLNGGHYTAFAQNPINKRWYEFDDSDVSRIDSSKIATKASYVLFYRRRQK 1417
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 37.7 bits (86), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
V G GHYTA+ +H +W +FND +V + YILFY +++
Sbjct: 492 VHHGSGAGTGHYTAFAVHDG--QWFHFNDSSVRPASTESVAKCKPYILFYVRKE 543
>gi|431899736|gb|ELK07687.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pteropus alecto]
Length = 646
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 591 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 639
>gi|255578843|ref|XP_002530276.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223530208|gb|EEF32116.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 942
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
G+ +GHYTA + W+ F+D + +D AY+LFY++ DS + G
Sbjct: 874 GMGSGHYTARIKLLDENRWYNFDDSHISLINEEDVKSAAAYVLFYRRVKADSAINNGG 931
>gi|150864435|ref|XP_001383247.2| hypothetical protein PICST_69820 [Scheffersomyces stipitis CBS 6054]
gi|149385691|gb|ABN65218.2| peptidase C19, ubiquitin C-terminal hydrolase 2 [Scheffersomyces
stipitis CBS 6054]
Length = 1340
Score = 37.7 bits (86), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 29/54 (53%), Gaps = 1/54 (1%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
HYTA + W+YFND V P++ + AY+LFY+KR D D + G
Sbjct: 1103 HYTASVKNFRDGNWYYFNDSRVTSINNPEEVITSAAYLLFYRKRTTDPDDYLGG 1156
>gi|210147497|ref|NP_001129942.1| ubiquitin carboxyl-terminal hydrolase 49 [Rattus norvegicus]
Length = 685
Score = 37.7 bits (86), Expect = 0.98, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 29/60 (48%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
KG +GHYTAY + W + ND + ++ AYILFY +R ++S P
Sbjct: 606 KGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAYILFYTRRTVQGSAKLSEP 665
>gi|301605952|ref|XP_002932588.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Xenopus
(Silurana) tropicalis]
Length = 501
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 28/54 (51%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
G Y + LH T +W+ D V + PQ + AYI +K+RD+D + + G
Sbjct: 447 GSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDDDDEKKQQG 500
>gi|189238741|ref|XP_972079.2| PREDICTED: similar to AGAP003821-PA [Tribolium castaneum]
Length = 928
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
GHY Y L N +W+ F+D+ V P+ AY+LFY+K +D
Sbjct: 575 GGHYICYAL--NGGQWYEFDDQYVTRVPPEKVQSCEAYVLFYRKVTNTAD 622
>gi|444323878|ref|XP_004182579.1| hypothetical protein TBLA_0J00600 [Tetrapisispora blattae CBS 6284]
gi|387515627|emb|CCH63060.1| hypothetical protein TBLA_0J00600 [Tetrapisispora blattae CBS 6284]
Length = 1462
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 30/50 (60%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
HYTAY + ++W+YF+D V PQ +AY+LFY +R ++ ++
Sbjct: 1176 HYTAYVKNFVDQKWYYFDDSRVSLADPQRSISGSAYLLFYVRRSSENPIK 1225
>gi|270011227|gb|EFA07675.1| hypothetical protein TcasGA2_TC030699 [Tribolium castaneum]
Length = 791
Score = 37.7 bits (86), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 2/50 (4%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
GHY Y L N +W+ F+D+ V P+ AY+LFY+K +D
Sbjct: 426 GGHYICYAL--NGGQWYEFDDQYVTRVPPEKVQSCEAYVLFYRKVTNTAD 473
>gi|167526465|ref|XP_001747566.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774012|gb|EDQ87646.1| predicted protein [Monosiga brevicollis MX1]
Length = 532
Score = 37.7 bits (86), Expect = 0.99, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 26/58 (44%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
M V ++AGHY A +P W ND V +D AYILFY +R +
Sbjct: 456 MVVHEGSSLTAGHYKALVYNPTIGAWVVKNDARVSVTTAEDVLERQAYILFYVQRQAN 513
>gi|336381122|gb|EGO22274.1| hypothetical protein SERLADRAFT_440291 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1348
Score = 37.7 bits (86), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY L+ T +W++F+D V R + NAY+LFY++R
Sbjct: 1089 YRAYALNHITDKWYHFDDSYVTPARSTEAVNANAYLLFYRRR 1130
>gi|397491429|ref|XP_003816666.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan paniscus]
Length = 545
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 490 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 538
>gi|392589983|gb|EIW79313.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 1272
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY H T +W++F+D V E + NAY+LFY++R
Sbjct: 1056 YRAYAHHYGTDKWYHFDDSYVTESTAEQSVNANAYLLFYQRR 1097
>gi|302309414|ref|NP_986805.2| AGR139Cp [Ashbya gossypii ATCC 10895]
gi|299788348|gb|AAS54629.2| AGR139Cp [Ashbya gossypii ATCC 10895]
gi|374110054|gb|AEY98959.1| FAGR139Cp [Ashbya gossypii FDAG1]
Length = 813
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQD--------EDFNNAYILFYKK 54
S GHYTA LH +W+ +D V E R +D D AYIL Y++
Sbjct: 761 SGGHYTADVLHQTQDKWYRIDDNNVTEIRQEDVFKRGDEASDSKTAYILIYQR 813
>gi|403365930|gb|EJY82756.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 828
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN--AYILFYKKRDED 58
+ GHY A+T H + W+ F+D+ V +R DE + AYILFY K D
Sbjct: 504 LGGGHYYAFTKHRQNQLWYSFDDDIV--KRISDEKVTSAGAYILFYSKMTVD 553
>gi|440803365|gb|ELR24271.1| ubiquitin interaction motif domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 826
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%), Gaps = 4/48 (8%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQ----DEDFNNAYILFY 52
S GHYT+Y +P + +W +ND+ V E + ++ N Y+LFY
Sbjct: 552 ASMGHYTSYVHNPTSGQWKEYNDDRVYELKESAALGEQAEKNGYLLFY 599
>gi|321250129|ref|XP_003191699.1| ubiquitin-specific protease [Cryptococcus gattii WM276]
gi|317458166|gb|ADV19912.1| Ubiquitin-specific protease, putative [Cryptococcus gattii WM276]
Length = 1310
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 9 VSAGHYTAYTLHPNTKE-WHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+S+GHYTA+ +KE W Y D V+ + +D AYILFYK+
Sbjct: 1264 LSSGHYTAFV---KSKEGWKYCEDSQVMPAQEKDVISRPAYILFYKR 1307
>gi|90075992|dbj|BAE87676.1| unnamed protein product [Macaca fascicularis]
Length = 485
Score = 37.4 bits (85), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 430 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 478
>gi|426336270|ref|XP_004029623.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Gorilla gorilla
gorilla]
Length = 516
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 461 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 509
>gi|348685710|gb|EGZ25525.1| hypothetical protein PHYSODRAFT_484843 [Phytophthora sojae]
Length = 1784
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 30/53 (56%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+ + GHYTAY + +W+Y++DE V Q +AY+LFY + D DS
Sbjct: 1696 RALGGGHYTAYAKNFVDDQWYYYDDERVRVVEEQQVVSPSAYLLFYLRSDMDS 1748
>gi|405118112|gb|AFR92887.1| ubiquitin-specific protease [Cryptococcus neoformans var. grubii H99]
Length = 1246
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 9 VSAGHYTAYTLHPNTKE-WHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+S+GHYTA+ +KE W Y D V+ + +D AYILFYK+
Sbjct: 1200 LSSGHYTAFV---KSKEGWKYCEDSQVMPAQEKDVISRPAYILFYKR 1243
>gi|395853581|ref|XP_003799283.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Otolemur
garnettii]
Length = 479
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 424 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDTD 472
>gi|390594435|gb|EIN03846.1| cysteine proteinase [Punctularia strigosozonata HHB-11173 SS5]
Length = 1186
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 2/46 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+S+GHYTA+ N +W Y +D V++ P++ AY+LFYK+
Sbjct: 1140 LSSGHYTAFISSRN--QWLYCDDSRVVQADPKEVVGKPAYVLFYKR 1183
>gi|301774987|ref|XP_002922905.1| PREDICTED: u4/U6.U5 tri-snRNP-associated protein 2-like [Ailuropoda
melanoleuca]
Length = 565
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|402891448|ref|XP_003908958.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Papio
anubis]
Length = 565
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|443694485|gb|ELT95606.1| hypothetical protein CAPTEDRAFT_180316 [Capitella teleta]
Length = 938
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 27/52 (51%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVS 64
HYTAY + +T EW++F+D +V AY+L Y +RD E S
Sbjct: 857 HYTAYGKNKDTGEWYHFDDSSVTATSEDSVVTKAAYVLVYLQRDLSQGAESS 908
>gi|355565860|gb|EHH22289.1| hypothetical protein EGK_05524 [Macaca mulatta]
Length = 565
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|336368311|gb|EGN96654.1| hypothetical protein SERLA73DRAFT_111301 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1271
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 14 YTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
Y AY L+ T +W++F+D V R + NAY+LFY++R
Sbjct: 1034 YRAYALNHITDKWYHFDDSYVTPARSTEAVNANAYLLFYRRR 1075
>gi|403345866|gb|EJY72314.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 1225
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
++ GHYTA+ +P K W+ F+D V +Y+LFY++R +
Sbjct: 1175 SLNGGHYTAFAQNPINKRWYEFDDSDVSRIDSSKIATKASYVLFYRRRQK 1224
>gi|145529976|ref|XP_001450771.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124418393|emb|CAK83374.1| unnamed protein product [Paramecium tetraurelia]
Length = 1153
Score = 37.4 bits (85), Expect = 1.1, Method: Composition-based stats.
Identities = 19/43 (44%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
HYTAY +P W FND V E R + + AY+LFY++R
Sbjct: 1109 HYTAYAKNPMYNAWFDFNDSQVKELR-SNPVTDAAYVLFYRRR 1150
>gi|395516301|ref|XP_003762329.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19 [Sarcophilus
harrisii]
Length = 1379
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY P+ K W F+D TV AY+LFY++R+
Sbjct: 1221 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRN 1276
>gi|194220522|ref|XP_001916281.1| PREDICTED: LOW QUALITY PROTEIN: u4/U6.U5 tri-snRNP-associated
protein 2-like [Equus caballus]
Length = 565
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|387762647|ref|NP_001248624.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|380808926|gb|AFE76338.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
gi|383415281|gb|AFH30854.1| U4/U6.U5 tri-snRNP-associated protein 2 [Macaca mulatta]
Length = 565
Score = 37.4 bits (85), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|432866297|ref|XP_004070782.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 21-like [Oryzias
latipes]
Length = 404
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 27/51 (52%), Gaps = 2/51 (3%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
V+ GHYTA L N W ++ND +V N AY+LFY++ + S
Sbjct: 352 VNMGHYTACCLDENG--WCFYNDCSVTALSENQLQTNQAYVLFYQRSKKTS 400
>gi|410955233|ref|XP_003984261.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Felis
catus]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|355751467|gb|EHH55722.1| hypothetical protein EGM_04981 [Macaca fascicularis]
Length = 563
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 508 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 556
>gi|62897263|dbj|BAD96572.1| ubiquitin specific protease 39 variant [Homo sapiens]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|449666470|ref|XP_002164031.2| PREDICTED: uncharacterized protein LOC100201504 [Hydra
magnipapillata]
Length = 995
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+GHYTA ++P ++W+ F+D V E N AY+LFY D
Sbjct: 943 SGHYTANCVNPYYEKWYNFDDSIVKEIDVNSIKTNTAYLLFYTAVD 988
>gi|57098329|ref|XP_532977.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Canis
lupus familiaris]
Length = 561
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 506 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 554
>gi|363739610|ref|XP_003642194.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31, partial
[Gallus gallus]
Length = 1292
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 26/47 (55%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHYTAY + +W+ F+D V + + AYILFY++R
Sbjct: 668 MQGGHYTAYCKNSVDGQWYCFDDSDVQQLSENEVCKQTAYILFYQRR 714
>gi|56550051|ref|NP_006581.2| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|376319199|ref|NP_001243654.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Homo sapiens]
gi|88909655|sp|Q53GS9.2|SNUT2_HUMAN RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39; AltName:
Full=SAD1 homolog; AltName: Full=U4/U6.U5
tri-snRNP-associated 65 kDa protein; Short=65K
gi|45595659|gb|AAH67273.1| USP39 protein [Homo sapiens]
gi|119619896|gb|EAW99490.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619898|gb|EAW99492.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|119619899|gb|EAW99493.1| ubiquitin specific peptidase 39, isoform CRA_a [Homo sapiens]
gi|158259925|dbj|BAF82140.1| unnamed protein product [Homo sapiens]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|19113904|ref|NP_592992.1| SAGA complex ubiquitin C-terminal hydrolase Ubp8
[Schizosaccharomyces pombe 972h-]
gi|1174862|sp|Q09738.1|UBP8_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 8;
AltName: Full=Deubiquitinating enzyme 8; AltName:
Full=Ubiquitin thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|984225|emb|CAA90805.1| SAGA complex ubiquitin C-terminal hydrolase Ubp8
[Schizosaccharomyces pombe]
Length = 449
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%), Gaps = 2/47 (4%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
+ GHY AYT + N +W +D T++E + + + AY+LFY +R
Sbjct: 391 LDTGHYIAYTYYQN--QWFLLDDTTIVEVKESEVLNSQAYLLFYHER 435
>gi|114578552|ref|XP_515591.2| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 4 [Pan
troglodytes]
gi|410217786|gb|JAA06112.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410292746|gb|JAA24973.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338569|gb|JAA38231.1| ubiquitin specific peptidase 39 [Pan troglodytes]
gi|410338571|gb|JAA38232.1| ubiquitin specific peptidase 39 [Pan troglodytes]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|58259279|ref|XP_567052.1| ubiquitin-specific protease [Cryptococcus neoformans var. neoformans
JEC21]
gi|134107425|ref|XP_777597.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260291|gb|EAL22950.1| hypothetical protein CNBA7180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223189|gb|AAW41233.1| ubiquitin-specific protease, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1312
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
Query: 9 VSAGHYTAYTLHPNTKE-WHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+S+GHYTA+ +KE W Y D V+ + +D AYILFYK+
Sbjct: 1266 LSSGHYTAFV---KSKEGWKYCEDSQVMPAQEKDVISRPAYILFYKR 1309
>gi|345320897|ref|XP_003430360.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal hydrolase
19-like [Ornithorhynchus anatinus]
Length = 1385
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY P+ K W F+D TV AY+LFY++R+
Sbjct: 1225 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTTVDESQVVTRYAYVLFYRRRN 1280
>gi|291386409|ref|XP_002709714.1| PREDICTED: ubiquitin specific protease 39 [Oryctolagus cuniculus]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|156348621|ref|XP_001621917.1| hypothetical protein NEMVEDRAFT_v1g221416 [Nematostella vectensis]
gi|156208263|gb|EDO29817.1| predicted protein [Nematostella vectensis]
Length = 234
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
GHYTA+ + + + W F+D+ V E D + AY+LFY
Sbjct: 182 GGHYTAFCKNAHNQRWFKFDDQVVTEMSANDIVSSAAYLLFY 223
>gi|197097880|ref|NP_001126415.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pongo abelii]
gi|75054842|sp|Q5R761.1|SNUT2_PONAB RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|55731370|emb|CAH92399.1| hypothetical protein [Pongo abelii]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|115384454|ref|XP_001208774.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114196466|gb|EAU38166.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 1407
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 29/46 (63%), Gaps = 1/46 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQ-RPQDEDFNNAYILFYKKRDE 57
HYTAY + T +W+ +ND +V PQ ++AY+LFY++R +
Sbjct: 1136 HYTAYAKNFMTGQWNEYNDSSVSRPIDPQSVVTSSAYLLFYRRRSD 1181
>gi|13926071|gb|AAK49524.1|AF353989_1 U4/U6.U5 tri-snRNP-associated 65 kDa protein [Homo sapiens]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|444518815|gb|ELV12403.1| U4/U6.U5 tri-snRNP-associated protein 2 [Tupaia chinensis]
Length = 544
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 489 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 537
>gi|50288319|ref|XP_446588.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525896|emb|CAG59515.1| unnamed protein product [Candida glabrata]
Length = 947
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
GHYT+Y ++ W+YF+D+ + E N NAY+LFY++
Sbjct: 899 GGHYTSYVNKGLSRGWYYFDDQNYRLVKKTSEVVNSNAYVLFYRR 943
>gi|66800105|ref|XP_628978.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60462340|gb|EAL60562.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1085
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTA+ L+ W F+D E + + AY+LFY+++D
Sbjct: 933 SLGGGHYTAFALNEPEDTWFKFDDSHASEANINSIESDAAYVLFYRRKD 981
>gi|47220072|emb|CAG12220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 890
Score = 37.4 bits (85), Expect = 1.2, Method: Composition-based stats.
Identities = 18/45 (40%), Positives = 25/45 (55%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
GHYTAY + +W+ F+D V +D AYILFY++R
Sbjct: 276 GGHYTAYCKNSIDGQWYCFDDSEVSPVADEDVCQQTAYILFYQRR 320
>gi|354547810|emb|CCE44545.1| hypothetical protein CPAR2_403480 [Candida parapsilosis]
Length = 797
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETV--LEQRPQDEDFNNAYILFYKK 54
+ V + +S+GHY + L P+ W ++DE + +++R D NAY+L Y K
Sbjct: 730 VIVHEGRSISSGHYICHVLQPDGVSWSTYDDEYINRIDERKALSDA-NAYVLVYTK 784
>gi|426223527|ref|XP_004005926.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1 [Ovis
aries]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|403303108|ref|XP_003942186.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Saimiri boliviensis boliviensis]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|296223374|ref|XP_002757592.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Callithrix jacchus]
Length = 565
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|37231483|gb|AAH01384.2| USP39 protein, partial [Homo sapiens]
Length = 562
Score = 37.4 bits (85), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 507 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 555
>gi|348509398|ref|XP_003442236.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 31-like
[Oreochromis niloticus]
Length = 1384
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 24/45 (53%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
GHYTAY + +W+ F+D V D AYILFY++R
Sbjct: 780 GGHYTAYCKNSIDGQWYCFDDSEVTAIADDDVCQQTAYILFYQRR 824
>gi|390179554|ref|XP_003736924.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
gi|388859895|gb|EIM52997.1| GA19137, isoform B [Drosophila pseudoobscura pseudoobscura]
Length = 328
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
+ GHYTA+ PN W+ F+D+ V + + AYILFY
Sbjct: 270 MEGGHYTAFCKSPNYGRWYKFDDQVVSTLDTSNVISSAAYILFY 313
>gi|313223609|emb|CBY41987.1| unnamed protein product [Oikopleura dioica]
Length = 432
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTA LH T W FND V ++AY+L Y + ED
Sbjct: 370 LGGGHYTANVLHTPTNNWLNFNDSFVSNATEDQSVSSSAYVLVYVRDTED 419
>gi|299117165|emb|CBN75129.1| ubiquitin carboxyl-terminal hydrolase [Ectocarpus siliculosus]
Length = 977
Score = 37.4 bits (85), Expect = 1.3, Method: Composition-based stats.
Identities = 20/58 (34%), Positives = 32/58 (55%), Gaps = 2/58 (3%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRDEDS 59
V + G+ GHYT+YT + W++FND T+ + QD + YIL Y+++ S
Sbjct: 653 VEHTGGLEHGHYTSYTRDDGSATWYHFND-TITTKVSQDTVSSASPYILVYRRKRPSS 709
>gi|149036403|gb|EDL91021.1| ubiquitin specific protease 39 (predicted), isoform CRA_b [Rattus
norvegicus]
gi|183986109|gb|AAI66516.1| Usp39 protein [Rattus norvegicus]
Length = 564
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 509 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 557
>gi|155372015|ref|NP_001094615.1| U4/U6.U5 tri-snRNP-associated protein 2 [Bos taurus]
gi|151556079|gb|AAI50036.1| USP39 protein [Bos taurus]
gi|296482482|tpg|DAA24597.1| TPA: ubiquitin specific protease 39 [Bos taurus]
Length = 565
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 510 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 558
>gi|26328829|dbj|BAC28153.1| unnamed protein product [Mus musculus]
Length = 564
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 509 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 557
>gi|348539075|ref|XP_003457015.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Oreochromis
niloticus]
Length = 1629
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY P+ K W F+D TV AY+LFY++R+
Sbjct: 1439 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVDESQVVTRYAYVLFYRRRN 1494
>gi|302760583|ref|XP_002963714.1| hypothetical protein SELMODRAFT_80757 [Selaginella moellendorffii]
gi|300168982|gb|EFJ35585.1| hypothetical protein SELMODRAFT_80757 [Selaginella moellendorffii]
Length = 289
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/43 (48%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
GHYTA PN K W+ F+DE V E ++AYILFY K
Sbjct: 245 GHYTATIKLPNGK-WYSFDDEVVEEIFELSRCSSDAYILFYHK 286
>gi|20070404|ref|NP_613058.1| U4/U6.U5 tri-snRNP-associated protein 2 [Mus musculus]
gi|88909656|sp|Q3TIX9.2|SNUT2_MOUSE RecName: Full=U4/U6.U5 tri-snRNP-associated protein 2; AltName:
Full=Inactive ubiquitin-specific peptidase 39
gi|12845893|dbj|BAB26944.1| unnamed protein product [Mus musculus]
gi|12858383|dbj|BAB31299.1| unnamed protein product [Mus musculus]
gi|20071704|gb|AAH26983.1| Ubiquitin specific peptidase 39 [Mus musculus]
gi|26353338|dbj|BAC40299.1| unnamed protein product [Mus musculus]
gi|74226993|dbj|BAE38302.1| unnamed protein product [Mus musculus]
gi|148666549|gb|EDK98965.1| ubiquitin specific peptidase 39, isoform CRA_a [Mus musculus]
Length = 564
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 509 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 557
>gi|74198469|dbj|BAE39717.1| unnamed protein product [Mus musculus]
Length = 564
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 509 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 557
>gi|354487022|ref|XP_003505674.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus
griseus]
gi|344237085|gb|EGV93188.1| U4/U6.U5 tri-snRNP-associated protein 2 [Cricetulus griseus]
Length = 564
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 509 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 557
>gi|313247032|emb|CBY35868.1| unnamed protein product [Oikopleura dioica]
Length = 816
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTA LH T W FND V ++AY+L Y + ED
Sbjct: 754 LGGGHYTANVLHTPTNNWLNFNDSFVSNATEDQSVSSSAYVLVYVRDTED 803
>gi|26337039|dbj|BAC32203.1| unnamed protein product [Mus musculus]
Length = 564
Score = 37.4 bits (85), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 509 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 557
>gi|313228437|emb|CBY23588.1| unnamed protein product [Oikopleura dioica]
Length = 820
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 24/50 (48%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ GHYTA LH T W FND V ++AY+L Y + ED
Sbjct: 758 LGGGHYTANVLHTPTNNWLNFNDSFVSNATEDQSVSSSAYVLVYVRDTED 807
>gi|118359579|ref|XP_001013029.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89294796|gb|EAR92784.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 528
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/45 (44%), Positives = 28/45 (62%), Gaps = 2/45 (4%)
Query: 12 GHYTAYTLHPNTKEWHYFND-ETVLEQRPQDE-DFNNAYILFYKK 54
GHY AY + K+W+ FND +T L Q P++ AY+LFY+K
Sbjct: 463 GHYVAYCKNQEDKQWYLFNDSKTSLIQDPEENIPKKEAYVLFYQK 507
>gi|348570388|ref|XP_003470979.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20-like [Cavia
porcellus]
Length = 901
Score = 37.0 bits (84), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E++
Sbjct: 624 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQHAEAYVLFYRKSSEEA 674
>gi|196001277|ref|XP_002110506.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
gi|190586457|gb|EDV26510.1| hypothetical protein TRIADDRAFT_22897 [Trichoplax adhaerens]
Length = 477
Score = 37.0 bits (84), Expect = 1.3, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 26/49 (53%), Gaps = 3/49 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G +GHYTAY W++FND TV + AYILFY +R+
Sbjct: 432 GYGSGHYTAYAYKDG---WYHFNDSTVSVAMEEHVIKCKAYILFYVQRE 477
>gi|145482423|ref|XP_001427234.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124394314|emb|CAK59836.1| unnamed protein product [Paramecium tetraurelia]
Length = 1041
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 29/51 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
G+ GHYTA+ + +W+ F+D V E +AY+LFYK+R ++
Sbjct: 981 GMGGGHYTAFGKNHLNGKWYNFDDAQVNEVDEDQIITKSAYVLFYKRRSKE 1031
>gi|410898910|ref|XP_003962940.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Takifugu
rubripes]
Length = 1589
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 27/56 (48%), Gaps = 7/56 (12%)
Query: 8 GVSAGHYTAYTLHPNTKE-------WHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
G+ GHYTAY P+ K W F+D TV AY+LFY++R+
Sbjct: 1461 GMIGGHYTAYARLPSDKNSQRSDVGWRLFDDSTVTMVDESQVVTRYAYVLFYRRRN 1516
>gi|324502429|gb|ADY41070.1| Ubiquitin carboxyl-terminal hydrolase 33 [Ascaris suum]
Length = 1035
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 24/48 (50%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+GHY AY + W+ F+D V D AY+LFY++R D
Sbjct: 719 SGHYLAYCRNEVDNNWYEFDDTIVTRLEVADVMGKEAYVLFYQRRGSD 766
>gi|384247322|gb|EIE20809.1| peptidase C19, ubiquitin carboxyl-terminal hydrolase 2, partial
[Coccomyxa subellipsoidea C-169]
Length = 380
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 1/50 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDE 57
G+ GHYTAY + WH F+D V AY+LFY++R E
Sbjct: 289 GLGGGHYTAYC-RMDDDGWHCFDDSHVSPADESSVQSKAAYLLFYRRRHE 337
>gi|359495412|ref|XP_003634986.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 5-like [Vitis
vinifera]
Length = 1056
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVS 64
G+ +GHYTA+ + W+ F+D + +D AY+LFYK+ D D VS
Sbjct: 884 GMGSGHYTAHIKLLDENRWYNFDDSHISAINEEDVKSAAAYVLFYKRVKID-DASVS 939
>gi|172730|gb|AAA35105.1| putative [Saccharomyces cerevisiae]
gi|738773|prf||2001427A deubiquitinating enzyme
Length = 927
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 24/45 (53%), Gaps = 1/45 (2%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
GHYTAY K W YFND + + + N NAY+LFY +
Sbjct: 879 GGHYTAYVKKGLKKGWLYFNDTKYKPVKNKADAINSNAYVLFYHR 923
>gi|256070822|ref|XP_002571741.1| ubiquitin-specific peptidase 44 (C19 family) [Schistosoma mansoni]
gi|360043136|emb|CCD78548.1| ubiquitin-specific peptidase 44 (C19 family) [Schistosoma mansoni]
Length = 823
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/48 (37%), Positives = 27/48 (56%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
+G+ +GHYT+Y L+ N + W + ND V + AYILFY +
Sbjct: 704 RGLQSGHYTSYCLNDNPECWLHCNDANVSLCDFSEVASAQAYILFYSE 751
>gi|260799513|ref|XP_002594740.1| hypothetical protein BRAFLDRAFT_224157 [Branchiostoma floridae]
gi|229279976|gb|EEN50751.1| hypothetical protein BRAFLDRAFT_224157 [Branchiostoma floridae]
Length = 915
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 28/57 (49%), Gaps = 6/57 (10%)
Query: 8 GVSAGHYTAYTLHPNTKE------WHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
G+ GHYTAY P+T W F+D V + +AY+LFY++R D
Sbjct: 858 GLLGGHYTAYAQLPDTSGSSNAIGWRLFDDSHVRAVHETEVMRPSAYLLFYRRRGAD 914
>gi|166240137|ref|XP_001733062.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|165988448|gb|EDR41009.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 1021
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 26/49 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
+ GHYTA+ L+ W F+D E + + AY+LFY+++D
Sbjct: 869 SLGGGHYTAFALNEPEDTWFKFDDSHASEANINSIESDAAYVLFYRRKD 917
>gi|348541545|ref|XP_003458247.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Oreochromis
niloticus]
Length = 1082
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 24/45 (53%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
G+ GHYTAY + + W+ F+D V + + AYILFY
Sbjct: 1035 GLDGGHYTAYCKNAAKQRWYKFDDHEVSDISTSSVKSSAAYILFY 1079
>gi|344238308|gb|EGV94411.1| Ubiquitin carboxyl-terminal hydrolase 49 [Cricetulus griseus]
Length = 617
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 28/60 (46%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
KG +GHYTAY + W + ND + ++ AYILFY +R +S P
Sbjct: 538 KGFGSGHYTAYCYNTEGGFWVHCNDSKLDVCSVEEVCKTQAYILFYTRRTVQGSARLSEP 597
>gi|167390679|ref|XP_001739450.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896829|gb|EDR24151.1| hypothetical protein EDI_036650 [Entamoeba dispar SAW760]
Length = 1298
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 15/64 (23%)
Query: 9 VSAGHYTAYTLHP-NTKEWHYFNDETV--------------LEQRPQDEDFNNAYILFYK 53
V+ GHY +Y L+P N +W YFND+ V ++ + E + AYIL Y+
Sbjct: 878 VNIGHYISYILNPENNIDWIYFNDDKVEKISWYNFNIQQKCFGKKDKKEYISTAYILIYQ 937
Query: 54 KRDE 57
K+ +
Sbjct: 938 KQSK 941
>gi|198455403|ref|XP_001359977.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
gi|198133229|gb|EAL29129.2| GA19137, isoform A [Drosophila pseudoobscura pseudoobscura]
Length = 901
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
+ GHYTA+ PN W+ F+D+ V + + AYILFY
Sbjct: 843 MEGGHYTAFCKSPNYGRWYKFDDQVVSTLDTSNVISSAAYILFY 886
>gi|195157880|ref|XP_002019822.1| GL12603 [Drosophila persimilis]
gi|194116413|gb|EDW38456.1| GL12603 [Drosophila persimilis]
Length = 901
Score = 37.0 bits (84), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/44 (38%), Positives = 24/44 (54%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
+ GHYTA+ PN W+ F+D+ V + + AYILFY
Sbjct: 843 MEGGHYTAFCKSPNYGRWYKFDDQVVSTLDTSNVISSAAYILFY 886
>gi|145532577|ref|XP_001452044.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419721|emb|CAK84647.1| unnamed protein product [Paramecium tetraurelia]
Length = 987
Score = 37.0 bits (84), Expect = 1.4, Method: Composition-based stats.
Identities = 22/49 (44%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKR 55
G+ GHYTAY N +W FND+ E + D + NAYILFY+K+
Sbjct: 941 GLDNGHYTAYGKRSN--KWIEFNDKQTKEVQVNDVINDKNAYILFYQKK 987
>gi|268536766|ref|XP_002633518.1| Hypothetical protein CBG05381 [Caenorhabditis briggsae]
Length = 899
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA--YILFYKKRDEDSDVEVSG 65
+S GHYTA + + ++W+ FND + P + + ++ YIL Y++R DS E
Sbjct: 796 SMSGGHYTAAAFNDHAQKWYDFNDSSASATYPPTDPYESSDPYILVYRRRPLDSRGEPLE 855
Query: 66 P 66
P
Sbjct: 856 P 856
>gi|332239225|ref|XP_003268807.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2
[Nomascus leucogenys]
Length = 449
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 394 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 442
>gi|332239223|ref|XP_003268806.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 1
[Nomascus leucogenys]
Length = 487
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 432 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 480
>gi|296088825|emb|CBI38283.3| unnamed protein product [Vitis vinifera]
Length = 955
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVS 64
G+ +GHYTA+ + W+ F+D + +D AY+LFYK+ D D VS
Sbjct: 884 GMGSGHYTAHIKLLDENRWYNFDDSHISAINEEDVKSAAAYVLFYKRVKID-DASVS 939
>gi|156044997|ref|XP_001589054.1| hypothetical protein SS1G_09687 [Sclerotinia sclerotiorum 1980]
gi|154694082|gb|EDN93820.1| hypothetical protein SS1G_09687 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1538
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 30/49 (61%), Gaps = 1/49 (2%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKKR 55
G+ GHYTA+ + +W+ +ND +V + + D+ AY+LFY++R
Sbjct: 1218 GMGGGHYTAFAKNFVDGKWYEYNDASVSQTQDLDKLVTRGAYLLFYRRR 1266
>gi|221043956|dbj|BAH13655.1| unnamed protein product [Homo sapiens]
Length = 487
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 432 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 480
>gi|156370210|ref|XP_001628364.1| predicted protein [Nematostella vectensis]
gi|156215339|gb|EDO36301.1| predicted protein [Nematostella vectensis]
Length = 409
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 11 AGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
GHYTA+ + + + W F+D+ V E D + AY+LFY
Sbjct: 357 GGHYTAFCKNAHNQRWFKFDDQVVTEMSANDIVSSAAYLLFY 398
>gi|440909376|gb|ELR59288.1| U4/U6.U5 tri-snRNP-associated protein 2, partial [Bos grunniens
mutus]
Length = 476
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 421 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 469
>gi|345486298|ref|XP_003425440.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 64E-like [Nasonia
vitripennis]
Length = 450
Score = 37.0 bits (84), Expect = 1.5, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 12/67 (17%)
Query: 12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN---------NAYILFYKK---RDEDS 59
GHY Y +T EW FND TV+ D + + NAY+L Y++ DE +
Sbjct: 220 GHYYTYIQDLDTNEWFCFNDSTVIRISKHDFEISFGNGNSGEGNAYLLIYRRCNEVDETA 279
Query: 60 DVEVSGP 66
VE S P
Sbjct: 280 LVEESSP 286
>gi|376319203|ref|NP_001243656.1| U4/U6.U5 tri-snRNP-associated protein 2 isoform 3 [Homo sapiens]
gi|114578548|ref|XP_001167639.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 2 [Pan
troglodytes]
Length = 487
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 432 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 480
>gi|193785997|dbj|BAG50973.1| unnamed protein product [Homo sapiens]
Length = 296
Score = 37.0 bits (84), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 241 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 289
>gi|118367493|ref|XP_001016960.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89298727|gb|EAR96715.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 1170
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6 SKGVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNN-AYILFYKKRDED 58
S + GHYTAY + +T++W+ F+D V + P E + AY+LFY K D
Sbjct: 426 SGNLGGGHYTAYAKNRDTQDWYLFDDSKVYYVKNPYKEIISQKAYVLFYSKTSVD 480
>gi|410035308|ref|XP_003949874.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Pan
troglodytes]
gi|11493496|gb|AAG35521.1|AF130117_55 PRO2855 [Homo sapiens]
gi|90085477|dbj|BAE91479.1| unnamed protein product [Macaca fascicularis]
gi|119619897|gb|EAW99491.1| ubiquitin specific peptidase 39, isoform CRA_b [Homo sapiens]
gi|193786396|dbj|BAG51679.1| unnamed protein product [Homo sapiens]
gi|343958404|dbj|BAK63057.1| U4/U6.U5 tri-snRNP-associated protein 2 [Pan troglodytes]
Length = 296
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 241 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 289
>gi|345309059|ref|XP_001518088.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 49
[Ornithorhynchus anatinus]
Length = 571
Score = 37.0 bits (84), Expect = 1.6, Method: Composition-based stats.
Identities = 20/59 (33%), Positives = 28/59 (47%)
Query: 7 KGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSG 65
KG +GHYTAY + W + ND + ++ AYILFY +R +VS
Sbjct: 310 KGFGSGHYTAYCYNTEGGFWVHCNDSKLNVCSVEEVCKTQAYILFYTQRTVQGSADVSA 368
>gi|432116599|gb|ELK37392.1| Ubiquitin carboxyl-terminal hydrolase 20 [Myotis davidii]
Length = 808
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E++
Sbjct: 533 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQSAEAYVLFYRKSSEEA 583
>gi|332239227|ref|XP_003268808.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 isoform 3
[Nomascus leucogenys]
Length = 462
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/49 (36%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
S G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 407 SEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDND 455
>gi|326675880|ref|XP_693811.5| PREDICTED: ubiquitin carboxyl-terminal hydrolase 8 [Danio rerio]
Length = 1067
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
G+ GHYTAY +P + W F+D V E AYI FY
Sbjct: 1020 GMDGGHYTAYCKNPMKQRWFKFDDHEVSEISSSTVRSPAAYIFFY 1064
>gi|387219077|gb|AFJ69247.1| ubiquitinspecific protease [Nannochloropsis gaditana CCMP526]
Length = 879
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 20/50 (40%), Positives = 29/50 (58%), Gaps = 2/50 (4%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKKRD 56
+ AGHY + +W+ FND V E+ P +E N +AYILFY ++D
Sbjct: 768 ALQAGHYVSTIRVNQGGKWYCFNDARV-EEVPAEELVNPSAYILFYIRKD 816
>gi|395508822|ref|XP_003758708.1| PREDICTED: U4/U6.U5 tri-snRNP-associated protein 2 [Sarcophilus
harrisii]
Length = 607
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/49 (34%), Positives = 25/49 (51%)
Query: 10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
+ G Y + LH T +W+ D V + PQ + AYI +K+RD D
Sbjct: 552 TEGSYRIHVLHHGTGKWYELQDLQVTDILPQMITLSEAYIQIWKRRDSD 600
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRD 56
V G GHYTA+ +H +W +FND +V RP D YILFY +++
Sbjct: 483 VHHGSGAGTGHYTAFAVHDG--QWFHFNDSSV---RPATTDAVAKCKPYILFYVRKE 534
>gi|345805954|ref|XP_537816.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 20 [Canis lupus
familiaris]
Length = 915
Score = 37.0 bits (84), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 27/51 (52%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
+GHY AY + +W+ F+D+ V E AY+LFY+K E++
Sbjct: 640 AGSGHYIAYCQNVINGQWYEFDDQYVTEVHETVVQSAEAYVLFYRKSSEEA 690
>gi|406606361|emb|CCH42352.1| putative ubiquitin carboxyl-terminal hydrolase 12 [Wickerhamomyces
ciferrii]
Length = 1327
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/48 (35%), Positives = 27/48 (56%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
G+S GHYT+ + +W+ +ND V +D AY+LFY++R
Sbjct: 1124 GISGGHYTSKVKNFVDNQWYNYNDSHVSPTSVEDLISAEAYLLFYRRR 1171
>gi|448534895|ref|XP_003870857.1| Doa4 protein [Candida orthopsilosis Co 90-125]
gi|380355213|emb|CCG24729.1| Doa4 protein [Candida orthopsilosis]
Length = 799
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 1/47 (2%)
Query: 9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFN-NAYILFYKK 54
+S GHYT+Y K W YF+D + +E N NA+ LF+++
Sbjct: 752 LSTGHYTSYVYKRGKKRWCYFDDSKITFNVSPNEVMNKNAFCLFFQR 798
>gi|448105860|ref|XP_004200605.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|448109008|ref|XP_004201236.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|359382027|emb|CCE80864.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
gi|359382792|emb|CCE80099.1| Piso0_003197 [Millerozyma farinosa CBS 7064]
Length = 1309
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Query: 13 HYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN-AYILFYKKRDED 58
HYTA + +W+YFND V E + E AY+LFY+KR ++
Sbjct: 1035 HYTASVKNFRDGKWYYFNDSRVTEIKDSQECVTGAAYLLFYRKRSQN 1081
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 37.0 bits (84), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 29/57 (50%), Gaps = 8/57 (14%)
Query: 3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKRD 56
V G GHYTA+ +H +W +FND +V RP D YILFY +++
Sbjct: 483 VHHGSGAGTGHYTAFAVHDG--QWFHFNDSSV---RPATTDAVAKCKPYILFYVRKE 534
>gi|145531593|ref|XP_001451563.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419218|emb|CAK84166.1| unnamed protein product [Paramecium tetraurelia]
Length = 989
Score = 37.0 bits (84), Expect = 1.7, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 29/49 (59%), Gaps = 3/49 (6%)
Query: 8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKR 55
G+ GHY AY K+W FND+T E + D + NAYILFY+++
Sbjct: 943 GLDNGHYIAYGRR--QKKWIEFNDDTTKEVKQNDVINDKNAYILFYQQK 989
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.133 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,217,971,876
Number of Sequences: 23463169
Number of extensions: 44158748
Number of successful extensions: 68796
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1052
Number of HSP's successfully gapped in prelim test: 978
Number of HSP's that attempted gapping in prelim test: 67338
Number of HSP's gapped (non-prelim): 2044
length of query: 66
length of database: 8,064,228,071
effective HSP length: 38
effective length of query: 28
effective length of database: 7,172,627,649
effective search space: 200833574172
effective search space used: 200833574172
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 69 (31.2 bits)