BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy7177
MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD
VEVSGP

High Scoring Gene Products

Symbol, full name Information P value
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Gallus gallus 4.3e-07
UBP12
Ubiquitin-specific protease
gene from Saccharomyces cerevisiae 2.8e-06
LOC100737416
Uncharacterized protein
protein from Sus scrofa 4.3e-06
USP2
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 8.1e-06
orf19.6260 gene_product from Candida albicans 8.4e-06
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Gallus gallus 9.0e-06
LOC100624494
Uncharacterized protein
protein from Sus scrofa 1.1e-05
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Homo sapiens 1.7e-05
Usp3
ubiquitin specific peptidase 3
protein from Mus musculus 1.8e-05
USP6
Ubiquitin carboxyl-terminal hydrolase 6
protein from Homo sapiens 2.3e-05
USP3
Ubiquitin carboxyl-terminal hydrolase 3
protein from Homo sapiens 2.4e-05
LOC100520041
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 2.5e-05
F1N3S5
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 2.6e-05
USP32
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 2.7e-05
USP32
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 2.7e-05
Usp3
ubiquitin specific peptidase 3
gene from Rattus norvegicus 3.0e-05
USP32
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 3.4e-05
USP2
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.6e-05
Usp2
ubiquitin specific peptidase 2
protein from Mus musculus 3.7e-05
Usp2
ubiquitin specific peptidase 2
gene from Rattus norvegicus 3.7e-05
Usp32
ubiquitin specific peptidase 32
gene from Rattus norvegicus 3.8e-05
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 4.0e-05
usp4
ubiquitin specific protease 4 (proto-oncogene)
gene_product from Danio rerio 4.2e-05
USP32
Ubiquitin carboxyl-terminal hydrolase 32
protein from Homo sapiens 4.3e-05
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Bos taurus 4.7e-05
LOC100520041
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 4.7e-05
usp11
ubiquitin specific peptidase 11
gene_product from Danio rerio 5.2e-05
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Gallus gallus 5.8e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 6.1e-05
Usp11
ubiquitin specific peptidase 11
protein from Mus musculus 6.2e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 6.2e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 6.2e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 6.2e-05
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 6.2e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 6.3e-05
USP11
Ubiquitin carboxyl-terminal hydrolase 11
protein from Homo sapiens 6.5e-05
USP43
Uncharacterized protein
protein from Canis lupus familiaris 6.9e-05
CG30421 protein from Drosophila melanogaster 7.0e-05
USP43
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 7.7e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 7.8e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 7.9e-05
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 8.2e-05
USP3
cDNA FLJ60359, highly similar to Ubiquitin carboxyl-terminal hydrolase 3 (EC 3.1.2.15)
protein from Homo sapiens 9.7e-05
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 0.00013
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 0.00013
usp2a
ubiquitin specific peptidase 2a
gene_product from Danio rerio 0.00020
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 0.00021
Usp15
ubiquitin specific peptidase 15
gene from Rattus norvegicus 0.00022
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 0.00022
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 0.00026
USP3
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 0.00026
USP3
Ubiquitin carboxyl-terminal hydrolase 3
protein from Homo sapiens 0.00028
USP15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Bos taurus 0.00028
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 0.00028
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 0.00028
Usp4
ubiquitin specific peptidase 4 (proto-oncogene)
gene from Rattus norvegicus 0.00028
Usp4
ubiquitin specific peptidase 4 (proto-oncogene)
protein from Mus musculus 0.00028
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Homo sapiens 0.00028
LOC100512072
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 0.00028
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Pongo abelii 0.00028
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 0.00028
USP15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Homo sapiens 0.00029
Usp15
ubiquitin specific peptidase 15
protein from Mus musculus 0.00029
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 0.00029
LOC100737425
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 0.00029
usp15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Xenopus (Silurana) tropicalis 0.00029
Usp43
ubiquitin specific peptidase 43
gene from Rattus norvegicus 0.00033
USP43
Ubiquitin carboxyl-terminal hydrolase 43
protein from Homo sapiens 0.00034
Usp43
ubiquitin specific peptidase 43
protein from Mus musculus 0.00034
USP33
Ubiquitin carboxyl-terminal hydrolase 33
protein from Homo sapiens 0.00038
Usp11
ubiquitin specific peptidase 11
gene from Rattus norvegicus 0.00040
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Bos taurus 0.00046
usp33
ubiquitin specific peptidase 33
gene_product from Danio rerio 0.00070
UBP10
AT4G10590
protein from Arabidopsis thaliana 0.00071
CG14619 protein from Drosophila melanogaster 0.00073
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 0.00077
I3L7M6
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 0.00089
USP43
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 0.00090
Usp33
ubiquitin specific peptidase 33
protein from Mus musculus 0.00090
USP33
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 0.00091
USP33
Ubiquitin carboxyl-terminal hydrolase 33
protein from Bos taurus 0.00091
USP33
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 0.00091
USP33
Ubiquitin carboxyl-terminal hydrolase 33
protein from Pongo abelii 0.00091
USP33
Ubiquitin carboxyl-terminal hydrolase 33
protein from Homo sapiens 0.00094
USP33
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 0.00095
F1SU01
Uncharacterized protein
protein from Sus scrofa 0.00097
USP48
Ubiquitin carboxyl-terminal hydrolase 48
protein from Gallus gallus 0.0010

The BLAST search returned 10 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy7177
        (66 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|F1NUS3 - symbol:F1NUS3 "Uncharacterized protein...   103  4.3e-07   2
SGD|S000003733 - symbol:UBP12 "Ubiquitin-specific proteas...   122  2.8e-06   1
UNIPROTKB|F1S200 - symbol:LOC100737416 "Uncharacterized p...   114  4.3e-06   1
UNIPROTKB|E9PPM2 - symbol:USP2 "Ubiquitin carboxyl-termin...   111  8.1e-06   1
CGD|CAL0000531 - symbol:orf19.6260 species:5476 "Candida ...   118  8.4e-06   1
UNIPROTKB|F1NUS4 - symbol:F1NUS4 "Uncharacterized protein...   103  9.0e-06   1
UNIPROTKB|I3LJX6 - symbol:LOC100624494 "Uncharacterized p...   102  1.1e-05   1
UNIPROTKB|O75604 - symbol:USP2 "Ubiquitin carboxyl-termin...   111  1.7e-05   1
MGI|MGI:2152450 - symbol:Usp3 "ubiquitin specific peptida...   110  1.8e-05   1
UNIPROTKB|P35125 - symbol:USP6 "Ubiquitin carboxyl-termin...   114  2.3e-05   1
UNIPROTKB|H0YM72 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  2.4e-05   1
UNIPROTKB|F1SAF6 - symbol:USP2 "Ubiquitin carboxyl-termin...   107  2.5e-05   1
UNIPROTKB|F1N3S5 - symbol:Bt.110642 "Ubiquitin carboxyl-t...   114  2.6e-05   1
UNIPROTKB|F1NZV6 - symbol:USP32 "Ubiquitin carboxyl-termi...   114  2.7e-05   1
UNIPROTKB|D4A4F6 - symbol:D4A4F6 "Ubiquitin carboxyl-term...   108  2.7e-05   1
UNIPROTKB|F1PDR8 - symbol:USP32 "Ubiquitin carboxyl-termi...   114  2.7e-05   1
RGD|1308852 - symbol:Usp3 "ubiquitin specific peptidase 3...   108  3.0e-05   1
UNIPROTKB|D4A4F5 - symbol:D4A4F5 "Ubiquitin carboxyl-term...   108  3.0e-05   1
UNIPROTKB|K7EQL6 - symbol:USP32 "Ubiquitin carboxyl-termi...   112  3.4e-05   1
UNIPROTKB|E2RSX3 - symbol:USP2 "Ubiquitin carboxyl-termin...   108  3.6e-05   1
MGI|MGI:1858178 - symbol:Usp2 "ubiquitin specific peptida...   108  3.7e-05   1
RGD|621073 - symbol:Usp2 "ubiquitin specific peptidase 2"...   108  3.7e-05   1
UNIPROTKB|Q5U349 - symbol:Usp2 "Ubiquitin carboxyl-termin...   108  3.7e-05   1
RGD|1306657 - symbol:Usp32 "ubiquitin specific peptidase ...   112  3.8e-05   1
UNIPROTKB|F1NE88 - symbol:USP4 "Ubiquitin carboxyl-termin...   110  4.0e-05   1
UNIPROTKB|F1NE89 - symbol:USP4 "Ubiquitin carboxyl-termin...   110  4.0e-05   1
ZFIN|ZDB-GENE-041008-187 - symbol:usp4 "ubiquitin specifi...   110  4.2e-05   1
UNIPROTKB|Q8NFA0 - symbol:USP32 "Ubiquitin carboxyl-termi...   112  4.3e-05   1
UNIPROTKB|Q2KHV7 - symbol:USP2 "Ubiquitin carboxyl-termin...   107  4.7e-05   1
UNIPROTKB|I3LI16 - symbol:USP2 "Ubiquitin carboxyl-termin...   107  4.7e-05   1
ZFIN|ZDB-GENE-081104-421 - symbol:usp11 "ubiquitin specif...   109  5.2e-05   1
UNIPROTKB|O57429 - symbol:USP2 "Ubiquitin carboxyl-termin...   103  5.8e-05   1
UNIPROTKB|G5E9A6 - symbol:USP11 "Ubiquitin carboxyl-termi...   108  6.1e-05   1
MGI|MGI:2384312 - symbol:Usp11 "ubiquitin specific peptid...   108  6.2e-05   1
UNIPROTKB|Q5D006 - symbol:Usp11 "Ubiquitin carboxyl-termi...   108  6.2e-05   1
UNIPROTKB|A1L506 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  6.2e-05   1
UNIPROTKB|K7GLG2 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  6.2e-05   1
UNIPROTKB|J9PB02 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  6.2e-05   1
UNIPROTKB|F1NQJ6 - symbol:USP3 "Ubiquitin carboxyl-termin...   105  6.2e-05   1
UNIPROTKB|J9P3M3 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  6.3e-05   1
UNIPROTKB|E1C6K3 - symbol:E1C6K3 "Uncharacterized protein...   103  6.4e-05   1
UNIPROTKB|P51784 - symbol:USP11 "Ubiquitin carboxyl-termi...   108  6.5e-05   1
UNIPROTKB|J9NYC4 - symbol:USP43 "Uncharacterized protein"...   108  6.9e-05   1
FB|FBgn0050421 - symbol:CG30421 species:7227 "Drosophila ...   109  7.0e-05   1
UNIPROTKB|E2RFR2 - symbol:USP43 "Ubiquitin carboxyl-termi...   108  7.7e-05   1
UNIPROTKB|A5PKF9 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  7.8e-05   1
UNIPROTKB|F1RWV6 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  7.9e-05   1
UNIPROTKB|F1PWM6 - symbol:USP11 "Ubiquitin carboxyl-termi...   107  8.2e-05   1
UNIPROTKB|B4DWJ6 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  9.7e-05   1
ASPGD|ASPL0000007671 - symbol:AN6354 species:162425 "Emer...   108  0.00010   1
UNIPROTKB|E1C8T4 - symbol:E1C8T4 "Uncharacterized protein...   103  0.00012   1
UNIPROTKB|E2QZQ0 - symbol:USP3 "Ubiquitin carboxyl-termin...   102  0.00013   1
UNIPROTKB|F1N0I6 - symbol:USP3 "Ubiquitin carboxyl-termin...   102  0.00013   1
ZFIN|ZDB-GENE-041212-59 - symbol:usp2a "ubiquitin specifi...   101  0.00020   1
UNIPROTKB|H0YLB7 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  0.00021   1
RGD|628795 - symbol:Usp15 "ubiquitin specific peptidase 1...   103  0.00022   1
UNIPROTKB|H0YKU8 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  0.00022   1
UNIPROTKB|Q6JHV3 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  0.00026   1
UNIPROTKB|H0YMI4 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  0.00026   1
UNIPROTKB|Q9Y6I4 - symbol:USP3 "Ubiquitin carboxyl-termin...    99  0.00028   1
UNIPROTKB|Q2HJE4 - symbol:USP15 "Ubiquitin carboxyl-termi...   102  0.00028   1
UNIPROTKB|J9PBI4 - symbol:USP15 "Ubiquitin carboxyl-termi...   102  0.00028   1
UNIPROTKB|E9PCQ3 - symbol:USP15 "Ubiquitin carboxyl-termi...   102  0.00028   1
RGD|1587387 - symbol:Usp4 "ubiquitin specific peptidase 4...   102  0.00028   1
MGI|MGI:98905 - symbol:Usp4 "ubiquitin specific peptidase...   102  0.00028   1
UNIPROTKB|Q13107 - symbol:USP4 "Ubiquitin carboxyl-termin...   102  0.00028   1
UNIPROTKB|F1SPT0 - symbol:USP4 "Ubiquitin carboxyl-termin...   102  0.00028   1
UNIPROTKB|Q5RCD3 - symbol:USP4 "Ubiquitin carboxyl-termin...   102  0.00028   1
UNIPROTKB|E2R6J5 - symbol:USP4 "Ubiquitin carboxyl-termin...   102  0.00028   1
UNIPROTKB|Q9Y4E8 - symbol:USP15 "Ubiquitin carboxyl-termi...   102  0.00029   1
MGI|MGI:101857 - symbol:Usp15 "ubiquitin specific peptida...   102  0.00029   1
UNIPROTKB|E2R988 - symbol:USP15 "Ubiquitin carboxyl-termi...   102  0.00029   1
UNIPROTKB|F1SKD5 - symbol:LOC100737425 "Ubiquitin carboxy...   102  0.00029   1
UNIPROTKB|F6Z5C0 - symbol:usp15 "Ubiquitin carboxyl-termi...   102  0.00029   1
RGD|2303824 - symbol:Usp43 "ubiquitin specific peptidase ...   102  0.00033   1
UNIPROTKB|F1LZN0 - symbol:Usp43_predicted "Ubiquitin carb...   102  0.00034   1
UNIPROTKB|Q70EL4 - symbol:USP43 "Ubiquitin carboxyl-termi...   102  0.00034   1
MGI|MGI:2444541 - symbol:Usp43 "ubiquitin specific peptid...   102  0.00034   1
UNIPROTKB|H0YCV3 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00038   1
RGD|1303052 - symbol:Usp11 "ubiquitin specific peptidase ...    99  0.00040   1
UNIPROTKB|A6QR55 - symbol:USP4 "Ubiquitin carboxyl-termin...   100  0.00046   1
ZFIN|ZDB-GENE-040426-2323 - symbol:usp33 "ubiquitin speci...    98  0.00070   1
TAIR|locus:2139222 - symbol:UBP10 "AT4G10590" species:370...    98  0.00071   1
FB|FBgn0031187 - symbol:CG14619 species:7227 "Drosophila ...    98  0.00073   1
UNIPROTKB|E1C719 - symbol:USP15 "Ubiquitin carboxyl-termi...    98  0.00075   1
UNIPROTKB|F1NFR2 - symbol:USP15 "Ubiquitin carboxyl-termi...    98  0.00075   1
UNIPROTKB|E1C718 - symbol:USP15 "Ubiquitin carboxyl-termi...    98  0.00077   1
UNIPROTKB|I3L7M6 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00089   1
UNIPROTKB|F1SS87 - symbol:USP43 "Ubiquitin carboxyl-termi...    98  0.00090   1
MGI|MGI:2159711 - symbol:Usp33 "ubiquitin specific peptid...    97  0.00090   1
UNIPROTKB|E1BWB2 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00091   1
UNIPROTKB|A6QNM7 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00091   1
UNIPROTKB|J9NW59 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00091   1
UNIPROTKB|Q5REG5 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00091   1
UNIPROTKB|Q8TEY7 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00094   1
UNIPROTKB|F1P6Y2 - symbol:USP33 "Ubiquitin carboxyl-termi...    97  0.00095   1
UNIPROTKB|F1SU01 - symbol:F1SU01 "Uncharacterized protein...    79  0.00097   2
POMBASE|SPCC1494.05c - symbol:ubp12 "CSN-associated deubi...    97  0.00099   1
POMBASE|SPAC13A11.04c - symbol:ubp8 "SAGA complex ubiquit...    93  0.00099   1
UNIPROTKB|Q5ZM45 - symbol:USP48 "Ubiquitin carboxyl-termi...    83  0.0010    2


>UNIPROTKB|F1NUS3 [details] [associations]
            symbol:F1NUS3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00819480 Ensembl:ENSGALT00000040829
            Uniprot:F1NUS3
        Length = 447

 Score = 103 (41.3 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P + EWH FND  V          ++AY+LFY+
Sbjct:   398 GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 439

 Score = 42 (19.8 bits), Expect = 4.3e-07, Sum P(2) = 4.3e-07
 Identities = 9/15 (60%), Positives = 11/15 (73%)

Query:     2 CVRPSKGV--SAGHY 14
             C RPS GV  SAG++
Sbjct:   205 CTRPSSGVHSSAGNF 219


>SGD|S000003733 [details] [associations]
            symbol:UBP12 "Ubiquitin-specific protease" species:4932
            "Saccharomyces cerevisiae" [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0008150 "biological_process" evidence=ND]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 SGD:S000003733 GO:GO:0005634
            GO:GO:0005737 EMBL:BK006943 EMBL:X77688 GO:GO:0006511 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5560 KO:K11835 GeneTree:ENSGT00670000097750
            OrthoDB:EOG4FR40X EMBL:Z49472 PIR:S46636 RefSeq:NP_012338.1
            ProteinModelPortal:P39538 SMR:P39538 DIP:DIP-6312N IntAct:P39538
            MINT:MINT-704453 STRING:P39538 MEROPS:C19.103 PaxDb:P39538
            PeptideAtlas:P39538 PRIDE:P39538 EnsemblFungi:YJL197W GeneID:853242
            KEGG:sce:YJL197W CYGD:YJL197w HOGENOM:HOG000057142 OMA:WYHTFTI
            NextBio:973472 Genevestigator:P39538 GermOnline:YJL197W
            Uniprot:P39538
        Length = 1254

 Score = 122 (48.0 bits), Expect = 2.8e-06, P = 2.8e-06
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSD 60
             G+  GHYTAY  +    +W+YF+D  V E  P++    +AY+LFY +R +D +
Sbjct:  1063 GLGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIRRHKDGN 1115


>UNIPROTKB|F1S200 [details] [associations]
            symbol:LOC100737416 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00680000099843 EMBL:CU928931
            Ensembl:ENSSSCT00000019249 OMA:ICEELHP Uniprot:F1S200
        Length = 389

 Score = 114 (45.2 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN+K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:   307 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 355


>UNIPROTKB|E9PPM2 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
            DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
            GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
            ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
            UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
        Length = 362

 Score = 111 (44.1 bits), Expect = 8.1e-06, P = 8.1e-06
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   313 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 354


>CGD|CAL0000531 [details] [associations]
            symbol:orf19.6260 species:5476 "Candida albicans" [GO:0005634
            "nucleus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS51283 CGD:CAL0000531 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AACQ01000037 KO:K11835 MEROPS:C19.103
            RefSeq:XP_718847.1 ProteinModelPortal:Q5AAY9 STRING:Q5AAY9
            GeneID:3639521 KEGG:cal:CaO19.6260 Uniprot:Q5AAY9
        Length = 1372

 Score = 118 (46.6 bits), Expect = 8.4e-06, P = 8.4e-06
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLE-QRPQDEDFNNAYILFYKKR 55
             G+  GHYTA   +    +W+YFND  V E   PQ+   N+AY+LFY++R
Sbjct:  1114 GLGGGHYTASVKNFRDDKWYYFNDSRVTEINNPQEVVANSAYLLFYRRR 1162


>UNIPROTKB|F1NUS4 [details] [associations]
            symbol:F1NUS4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00821325 Ensembl:ENSGALT00000040826
            Uniprot:F1NUS4
        Length = 161

 Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P + EWH FND  V          ++AY+LFY+
Sbjct:   112 GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 153


>UNIPROTKB|I3LJX6 [details] [associations]
            symbol:LOC100624494 "Uncharacterized protein" species:9823
            "Sus scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000102047 EMBL:CU550694
            Ensembl:ENSSSCT00000029412 Ensembl:ENSSSCT00000031114 OMA:ANAGHYT
            Uniprot:I3LJX6
        Length = 137

 Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
 Identities = 26/56 (46%), Positives = 29/56 (51%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
             V    GV +GHYTAY  H     W +FND TV      DED      AYILFY +R
Sbjct:    78 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLT---DEDTVVKAKAYILFYVER 128


>UNIPROTKB|O75604 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA] [GO:0048642
            "negative regulation of skeletal muscle tissue development"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0050821 "protein stabilization" evidence=IMP;IDA] [GO:0045931
            "positive regulation of mitotic cell cycle" evidence=IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IMP;IDA] [GO:0030332 "cyclin
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 EMBL:CH471065
            GO:GO:0046872 GO:GO:0045931 GO:GO:0000122 GO:GO:0007049
            GO:GO:0007517 GO:GO:0006511 GO:GO:0004197 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642 PDB:3NHE
            PDBsum:3NHE PDB:2HD5 PDBsum:2HD5 PDB:2IBI PDB:3V6C PDB:3V6E
            PDBsum:2IBI PDBsum:3V6C PDBsum:3V6E HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH EMBL:AF079564 EMBL:AF440755 EMBL:AK057225
            EMBL:AK292255 EMBL:EF445044 EMBL:AP003396 EMBL:BC002854
            EMBL:BC002955 EMBL:BC041366 IPI:IPI00216783 IPI:IPI00298910
            IPI:IPI00969446 IPI:IPI00969474 RefSeq:NP_001230688.1
            RefSeq:NP_004196.4 RefSeq:NP_741994.1 UniGene:Hs.524085
            ProteinModelPortal:O75604 SMR:O75604 DIP:DIP-29134N IntAct:O75604
            MINT:MINT-4304073 STRING:O75604 PhosphoSite:O75604 PaxDb:O75604
            PRIDE:O75604 DNASU:9099 Ensembl:ENST00000260187
            Ensembl:ENST00000525735 GeneID:9099 KEGG:hsa:9099 UCSC:uc001pwl.4
            UCSC:uc001pwm.4 GeneCards:GC11M119259 HGNC:HGNC:12618 HPA:HPA006777
            HPA:HPA007222 MIM:604725 neXtProt:NX_O75604 PharmGKB:PA37244
            InParanoid:O75604 OMA:SASHRSY PhylomeDB:O75604 ChEMBL:CHEMBL1293227
            ChiTaRS:USP2 EvolutionaryTrace:O75604 GenomeRNAi:9099 NextBio:34107
            ArrayExpress:O75604 Bgee:O75604 CleanEx:HS_USP2
            Genevestigator:O75604 GermOnline:ENSG00000036672 Uniprot:O75604
        Length = 605

 Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   556 GHYTAYCRSPGTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 597


>MGI|MGI:2152450 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10090
            "Mus musculus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006281 "DNA repair" evidence=ISO]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
            [GO:0016578 "histone deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0031647 "regulation of
            protein stability" evidence=ISO] [GO:0042393 "histone binding"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 MGI:MGI:2152450 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5560
            HOGENOM:HOG000231498 GeneTree:ENSGT00690000102047 MEROPS:C19.026
            CTD:9960 HOVERGEN:HBG103589 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            EMBL:AK031141 EMBL:BC017156 IPI:IPI00127231 RefSeq:NP_659186.1
            UniGene:Mm.38976 ProteinModelPortal:Q91W36 SMR:Q91W36
            PhosphoSite:Q91W36 PaxDb:Q91W36 PRIDE:Q91W36
            Ensembl:ENSMUST00000127569 GeneID:235441 KEGG:mmu:235441
            UCSC:uc009qey.1 InParanoid:Q91W36 NextBio:382674 Bgee:Q91W36
            CleanEx:MM_USP3 Genevestigator:Q91W36 GermOnline:ENSMUSG00000032376
            Uniprot:Q91W36
        Length = 520

 Score = 110 (43.8 bits), Expect = 1.8e-05, P = 1.8e-05
 Identities = 24/60 (40%), Positives = 30/60 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             V    GV +GHYTAY +H     W +FND TV     +      AYILFY +R   +  E
Sbjct:   461 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVERQARAGAE 518


>UNIPROTKB|P35125 [details] [associations]
            symbol:USP6 "Ubiquitin carboxyl-terminal hydrolase 6"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006464 "cellular protein modification
            process" evidence=NAS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=TAS] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0060627 "regulation of vesicle-mediated
            transport" evidence=IDA] [GO:0055037 "recycling endosome"
            evidence=IDA] [GO:0005516 "calmodulin binding" evidence=IPI]
            [GO:0003676 "nucleic acid binding" evidence=TAS] [GO:0005764
            "lysosome" evidence=TAS] InterPro:IPR000195 InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF00566 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50086 PROSITE:PS50235 SMART:SM00164
            GO:GO:0005886 GO:GO:0060627 GO:GO:0003676 GO:GO:0005764
            GO:GO:0055037 Pathway_Interaction_DB:arf6cyclingpathway
            GO:GO:0006511 eggNOG:COG5210 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0005097 GO:GO:0032851
            SUPFAM:SSF47923 KO:K11837 EMBL:X63546 EMBL:X63547 EMBL:AY143550
            EMBL:AY163314 IPI:IPI00423562 IPI:IPI00423563 IPI:IPI00423565
            PIR:S57867 PIR:S57868 PIR:S57874 RefSeq:NP_004496.2
            UniGene:Hs.448851 ProteinModelPortal:P35125 SMR:P35125
            IntAct:P35125 MINT:MINT-2865848 STRING:P35125 MEROPS:C19.009
            PhosphoSite:P35125 DMDM:50403738 PaxDb:P35125 PRIDE:P35125
            DNASU:9098 Ensembl:ENST00000250066 Ensembl:ENST00000304328
            Ensembl:ENST00000332776 Ensembl:ENST00000572949
            Ensembl:ENST00000574788 GeneID:9098 KEGG:hsa:9098 UCSC:uc002gau.1
            UCSC:uc010ckz.1 CTD:9098 GeneCards:GC17P005019 H-InvDB:HIX0202554
            HGNC:HGNC:12629 HPA:HPA011742 MIM:604334 neXtProt:NX_P35125
            PharmGKB:PA37254 HOGENOM:HOG000154762 InParanoid:P35125 OMA:LAEVHDS
            OrthoDB:EOG469QSX PhylomeDB:P35125 ChiTaRS:USP6 GenomeRNAi:9098
            NextBio:34099 ArrayExpress:P35125 Bgee:P35125 CleanEx:HS_USP6
            Genevestigator:P35125 GermOnline:ENSG00000129204 Uniprot:P35125
        Length = 1406

 Score = 114 (45.2 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 21/50 (42%), Positives = 32/50 (64%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +S GHY  Y  +PN K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1324 LSGGHYITYAKNPNCK-WYCYNDSSCEELHPDEIDTDSAYILFYEQQGID 1372


>UNIPROTKB|H0YM72 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            HGNC:HGNC:12626 ChiTaRS:USP3 Ensembl:ENST00000560202 Bgee:H0YM72
            Uniprot:H0YM72
        Length = 106

 Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:    47 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 94


>UNIPROTKB|F1SAF6 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
            RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
            KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
        Length = 396

 Score = 107 (42.7 bits), Expect = 2.5e-05, P = 2.5e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   347 GHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 388


>UNIPROTKB|F1N3S5 [details] [associations]
            symbol:Bt.110642 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0005509 "calcium ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00018 GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 OMA:SDNNNQC
            GeneTree:ENSGT00680000099843 EMBL:DAAA02048411 EMBL:DAAA02048412
            EMBL:DAAA02048413 EMBL:DAAA02048414 IPI:IPI00705388
            Ensembl:ENSBTAT00000026766 Uniprot:F1N3S5
        Length = 1542

 Score = 114 (45.2 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN+K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1460 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1508


>UNIPROTKB|F1NZV6 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            InterPro:IPR001125 InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13202 PRINTS:PR00450
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 GO:GO:0004221 OMA:SDNNNQC
            GeneTree:ENSGT00680000099843 EMBL:AADN02025765 IPI:IPI00580446
            Ensembl:ENSGALT00000008580 Uniprot:F1NZV6
        Length = 1601

 Score = 114 (45.2 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1519 MGGGHYVTYAKNPNNK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGVD 1567


>UNIPROTKB|D4A4F6 [details] [associations]
            symbol:D4A4F6 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0042393 "histone binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000102047
            IPI:IPI00366664 Ensembl:ENSRNOT00000057739 ArrayExpress:D4A4F6
            Uniprot:D4A4F6
        Length = 483

 Score = 108 (43.1 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 23/53 (43%), Positives = 28/53 (52%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
             V    GV +GHYTAY +H     W +FND TV     +      AYILFY +R
Sbjct:   424 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 474


>UNIPROTKB|F1PDR8 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0005509 "calcium ion
            binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13202 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00054 SMART:SM00695 Prosite:PS00018 GO:GO:0008234
            GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0006511
            GO:GO:0004221 OMA:SDNNNQC GeneTree:ENSGT00680000099843
            EMBL:AAEX03006607 EMBL:AAEX03006603 EMBL:AAEX03006604
            EMBL:AAEX03006605 EMBL:AAEX03006606 Ensembl:ENSCAFT00000028225
            Uniprot:F1PDR8
        Length = 1633

 Score = 114 (45.2 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN+K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1551 LGGGHYVTYAKNPNSK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1599


>RGD|1308852 [details] [associations]
            symbol:Usp3 "ubiquitin specific peptidase 3" species:10116
            "Rattus norvegicus" [GO:0000278 "mitotic cell cycle" evidence=ISO]
            [GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0006281 "DNA
            repair" evidence=ISO] [GO:0016578 "histone deubiquitination"
            evidence=ISO] [GO:0031647 "regulation of protein stability"
            evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 RGD:1308852 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 MEROPS:C19.026 CTD:9960
            HOVERGEN:HBG103589 KO:K11986 IPI:IPI00366664 EMBL:DQ076481
            RefSeq:NP_001020595.1 UniGene:Rn.164920 ProteinModelPortal:Q4JL29
            GeneID:363084 KEGG:rno:363084 UCSC:RGD:1308852 NextBio:682386
            Genevestigator:Q4JL29 Uniprot:Q4JL29
        Length = 520

 Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 23/53 (43%), Positives = 28/53 (52%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
             V    GV +GHYTAY +H     W +FND TV     +      AYILFY +R
Sbjct:   461 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 511


>UNIPROTKB|D4A4F5 [details] [associations]
            symbol:D4A4F5 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0016578 "histone
            deubiquitination" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0042393 "histone binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278 OMA:DCLRSFT
            OrthoDB:EOG4G4GQC IPI:IPI00776807 Ensembl:ENSRNOT00000057742
            ArrayExpress:D4A4F5 Uniprot:D4A4F5
        Length = 521

 Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
 Identities = 23/53 (43%), Positives = 28/53 (52%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
             V    GV +GHYTAY +H     W +FND TV     +      AYILFY +R
Sbjct:   462 VHHGSGVGSGHYTAYAVHEG--RWFHFNDSTVTVTDEETVGKAKAYILFYVER 512


>UNIPROTKB|K7EQL6 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 HGNC:HGNC:19143 EMBL:AC025048 EMBL:AC003962
            EMBL:AC037475 EMBL:AC104763 Ensembl:ENST00000592339 Uniprot:K7EQL6
        Length = 1274

 Score = 112 (44.5 bits), Expect = 3.4e-05, P = 3.4e-05
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1192 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1240


>UNIPROTKB|E2RSX3 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0050821 "protein
            stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
            EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
            Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
            NextBio:20893859 Uniprot:E2RSX3
        Length = 606

 Score = 108 (43.1 bits), Expect = 3.6e-05, P = 3.6e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   557 GHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 598


>MGI|MGI:1858178 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005813 "centrosome" evidence=ISO] [GO:0005938 "cell cortex"
            evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030332 "cyclin
            binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=ISO] [GO:0042802 "identical protein binding"
            evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISO] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=ISO] [GO:0050821
            "protein stabilization" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1858178 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 GO:GO:0046872
            GO:GO:0045931 GO:GO:0008234 GO:GO:0000122 GO:GO:0007049
            GO:GO:0042802 GO:GO:0007517 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642
            HOGENOM:HOG000231498 HOVERGEN:HBG011164 KO:K11833
            GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AY255637 EMBL:AY255638
            EMBL:AY255639 EMBL:AY255640 EMBL:AB041799 EMBL:AK138799
            EMBL:BC017517 EMBL:AF079565 IPI:IPI00377286 IPI:IPI00409197
            IPI:IPI00785316 IPI:IPI00785464 RefSeq:NP_058088.2
            RefSeq:NP_932759.1 RefSeq:NP_932760.2 UniGene:Mm.272770
            ProteinModelPortal:O88623 SMR:O88623 STRING:O88623
            PhosphoSite:O88623 PRIDE:O88623 Ensembl:ENSMUST00000034508
            Ensembl:ENSMUST00000065461 Ensembl:ENSMUST00000114830
            Ensembl:ENSMUST00000176416 Ensembl:ENSMUST00000177054 GeneID:53376
            KEGG:mmu:53376 UCSC:uc009pbn.1 UCSC:uc009pbp.1 UCSC:uc012grp.1
            InParanoid:O88623 NextBio:310185 Bgee:O88623 CleanEx:MM_USP2
            Genevestigator:O88623 GermOnline:ENSMUSG00000032010 Uniprot:O88623
        Length = 613

 Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   564 GHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 605


>RGD|621073 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IEA;ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;ISS;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
            "centrosome" evidence=IDA] [GO:0005938 "cell cortex"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA;ISO;ISS;IDA]
            [GO:0030332 "cyclin binding" evidence=IEA;ISO] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA;ISO] [GO:0042802
            "identical protein binding" evidence=IEA;ISO] [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
            of cytoplasm" evidence=IEA;ISO;IDA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IDA]
            [GO:0048643 "positive regulation of skeletal muscle tissue
            development" evidence=IDA] [GO:0050821 "protein stabilization"
            evidence=IEA;ISO;ISS] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:621073 GO:GO:0005938 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
            GO:GO:0050821 GO:GO:0046872 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0007049 GO:GO:0007517 GO:GO:0006511
            EMBL:CH473975 GO:GO:0016579 GO:GO:0004221 GO:GO:0048643
            eggNOG:COG5533 HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            MEROPS:C19.013 CTD:9099 OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453
            EMBL:AF202454 EMBL:AF106658 EMBL:AF106659 EMBL:BC085719
            IPI:IPI00213304 IPI:IPI00213307 RefSeq:NP_446226.2
            UniGene:Rn.203590 ProteinModelPortal:Q5U349 SMR:Q5U349
            DIP:DIP-48683N STRING:Q5U349 Ensembl:ENSRNOT00000009975
            Ensembl:ENSRNOT00000036051 GeneID:115771 KEGG:rno:115771
            UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   569 GHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 610


>UNIPROTKB|Q5U349 [details] [associations]
            symbol:Usp2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:10116 "Rattus norvegicus" [GO:0005938 "cell cortex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:621073 GO:GO:0005938
            GO:GO:0005634 GO:GO:0005813 GO:GO:0048471 GO:GO:0050821
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008234 GO:GO:0000122
            GO:GO:0007049 GO:GO:0007517 GO:GO:0006511 EMBL:CH473975
            GO:GO:0016579 GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533
            HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498 HOVERGEN:HBG011164
            KO:K11833 GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453 EMBL:AF202454
            EMBL:AF106658 EMBL:AF106659 EMBL:BC085719 IPI:IPI00213304
            IPI:IPI00213307 RefSeq:NP_446226.2 UniGene:Rn.203590
            ProteinModelPortal:Q5U349 SMR:Q5U349 DIP:DIP-48683N STRING:Q5U349
            Ensembl:ENSRNOT00000009975 Ensembl:ENSRNOT00000036051 GeneID:115771
            KEGG:rno:115771 UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 108 (43.1 bits), Expect = 3.7e-05, P = 3.7e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   569 GHYTAYCRSPVTGEWHTFNDSSVTPMSSSQVRTSDAYLLFYE 610


>RGD|1306657 [details] [associations]
            symbol:Usp32 "ubiquitin specific peptidase 32" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 Prosite:PS00018 RGD:1306657
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 EMBL:CH473948 GO:GO:0004221 CTD:84669 KO:K11837
            OrthoDB:EOG49S65F GeneTree:ENSGT00680000099843 IPI:IPI00870119
            RefSeq:NP_001100502.1 UniGene:Rn.16359 Ensembl:ENSRNOT00000036814
            GeneID:303394 KEGG:rno:303394 NextBio:651274 Uniprot:D3ZBB7
        Length = 1431

 Score = 112 (44.5 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1349 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1397


>UNIPROTKB|F1NE88 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02056463 EMBL:AADN02056462
            IPI:IPI00586703 Ensembl:ENSGALT00000006026 Uniprot:F1NE88
        Length = 963

 Score = 110 (43.8 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDEDSDVEVSGP 66
             +  GHYTAY  +    +W+YF+D +V     +D+    A Y+LFY++RD +  V  S P
Sbjct:   896 MGVGHYTAYAKNKVNGKWYYFDDSSV-SLASEDQIVTKAAYVLFYQRRDNEEHVAPSPP 953


>UNIPROTKB|F1NE89 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:AADN02056463
            EMBL:AADN02056462 IPI:IPI00596700 Ensembl:ENSGALT00000006024
            Uniprot:F1NE89
        Length = 966

 Score = 110 (43.8 bits), Expect = 4.0e-05, P = 4.0e-05
 Identities = 22/59 (37%), Positives = 34/59 (57%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDEDSDVEVSGP 66
             +  GHYTAY  +    +W+YF+D +V     +D+    A Y+LFY++RD +  V  S P
Sbjct:   899 MGVGHYTAYAKNKVNGKWYYFDDSSV-SLASEDQIVTKAAYVLFYQRRDNEEHVAPSPP 956


>ZFIN|ZDB-GENE-041008-187 [details] [associations]
            symbol:usp4 "ubiquitin specific protease 4
            (proto-oncogene)" species:7955 "Danio rerio" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-041008-187 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            KO:K11835 GeneTree:ENSGT00670000097750 CTD:7375 EMBL:BX957236
            IPI:IPI00492306 RefSeq:XP_002662556.2 UniGene:Dr.125623
            UniGene:Dr.161797 UniGene:Dr.37682 Ensembl:ENSDART00000039868
            GeneID:449927 KEGG:dre:449927 NextBio:20832950 Uniprot:E7EZD6
        Length = 1009

 Score = 110 (43.8 bits), Expect = 4.2e-05, P = 4.2e-05
 Identities = 21/53 (39%), Positives = 33/53 (62%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDEDS 59
             G+  GHYTAY  +    +W+YF+D +V     +D+    A Y+LFY++RD D+
Sbjct:   934 GMGGGHYTAYGKNKADGKWYYFDDSSV-SAATEDQIVTKAAYVLFYQRRDADT 985


>UNIPROTKB|Q8NFA0 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase 32"
            species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016579 "protein
            deubiquitination" evidence=TAS] InterPro:IPR001125
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            Pfam:PF13202 PRINTS:PR00450 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00054
            SMART:SM00695 Prosite:PS00018 GO:GO:0005794 GO:GO:0016020
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 eggNOG:COG5210 GO:GO:0016579 GO:GO:0004221
            CleanEx:HS_USP10 EMBL:AF533230 EMBL:AF350251 EMBL:AF155116
            IPI:IPI00185661 RefSeq:NP_115971.2 UniGene:Hs.132868
            ProteinModelPortal:Q8NFA0 SMR:Q8NFA0 IntAct:Q8NFA0 STRING:Q8NFA0
            MEROPS:C19.044 PhosphoSite:Q8NFA0 DMDM:47606649 PaxDb:Q8NFA0
            PRIDE:Q8NFA0 DNASU:84669 Ensembl:ENST00000300896 GeneID:84669
            KEGG:hsa:84669 UCSC:uc002iyn.1 CTD:84669 GeneCards:GC17M058254
            HGNC:HGNC:19143 HPA:HPA044365 MIM:607740 neXtProt:NX_Q8NFA0
            PharmGKB:PA134982542 HOGENOM:HOG000007511 HOVERGEN:HBG057958
            InParanoid:Q8NFA0 KO:K11837 OMA:SDNNNQC OrthoDB:EOG49S65F
            PhylomeDB:Q8NFA0 ChiTaRS:USP32 GenomeRNAi:84669 NextBio:74669
            ArrayExpress:Q8NFA0 Bgee:Q8NFA0 CleanEx:HS_USP32
            Genevestigator:Q8NFA0 GermOnline:ENSG00000170832 Uniprot:Q8NFA0
        Length = 1604

 Score = 112 (44.5 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 20/50 (40%), Positives = 31/50 (62%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDED 58
             +  GHY  Y  +PN K W+ +ND +  E  P + D ++AYILFY+++  D
Sbjct:  1522 LGGGHYVTYAKNPNCK-WYCYNDSSCKELHPDEIDTDSAYILFYEQQGID 1570


>UNIPROTKB|Q2KHV7 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0050821 "protein stabilization"
            evidence=ISS] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0031625 "ubiquitin
            protein ligase binding" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0046872 GO:GO:0045931
            GO:GO:0008234 GO:GO:0000122 GO:GO:0007049 GO:GO:0007517
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            EMBL:BC112866 IPI:IPI00694687 RefSeq:NP_001039728.1
            UniGene:Bt.21721 ProteinModelPortal:Q2KHV7 SMR:Q2KHV7
            MEROPS:C19.013 PRIDE:Q2KHV7 Ensembl:ENSBTAT00000012857
            GeneID:522980 KEGG:bta:522980 CTD:9099 HOGENOM:HOG000048720
            InParanoid:Q2KHV7 OMA:GFKPGPP OrthoDB:EOG47M1XH NextBio:20873641
            Uniprot:Q2KHV7
        Length = 606

 Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   557 GHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 598


>UNIPROTKB|I3LI16 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
            KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
            Uniprot:I3LI16
        Length = 606

 Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
 Identities = 20/42 (47%), Positives = 25/42 (59%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P T EWH FND +V          ++AY+LFY+
Sbjct:   557 GHYTAYCRSPVTGEWHTFNDSSVSPMSSSQVRTSDAYLLFYE 598


>ZFIN|ZDB-GENE-081104-421 [details] [associations]
            symbol:usp11 "ubiquitin specific peptidase 11"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 ZFIN:ZDB-GENE-081104-421 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097750 EMBL:CR457452
            EMBL:CR847787 IPI:IPI00890594 Ensembl:ENSDART00000075624
            ArrayExpress:F1QPF4 Bgee:F1QPF4 Uniprot:F1QPF4
        Length = 990

 Score = 109 (43.4 bits), Expect = 5.2e-05, P = 5.2e-05
 Identities = 20/59 (33%), Positives = 34/59 (57%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVEVSGP 66
             G+  GHYT+Y  + +  +W+YF+D  V   R +    + AY+LFY+++D+     V  P
Sbjct:   901 GLRDGHYTSYARNKDNGQWYYFDDSKVTYAREEQIVTSAAYLLFYQRQDKIRQPSVPPP 959


>UNIPROTKB|O57429 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
            IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
            SMR:O57429 Uniprot:O57429
        Length = 357

 Score = 103 (41.3 bits), Expect = 5.8e-05, P = 5.8e-05
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P + EWH FND  V          ++AY+LFY+
Sbjct:   308 GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 349


>UNIPROTKB|G5E9A6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005737 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL096791 EMBL:CH471164 UniGene:Hs.171501 HGNC:HGNC:12609
            ChiTaRS:USP11 ProteinModelPortal:G5E9A6 SMR:G5E9A6 PRIDE:G5E9A6
            Ensembl:ENST00000377107 ArrayExpress:G5E9A6 Bgee:G5E9A6
            Uniprot:G5E9A6
        Length = 920

 Score = 108 (43.1 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   840 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 888


>MGI|MGI:2384312 [details] [associations]
            symbol:Usp11 "ubiquitin specific peptidase 11" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] Reactome:REACT_93132
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:2384312
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:CH466625 EMBL:AL807240
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 MEROPS:C19.014
            HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237 EMBL:AK166523
            EMBL:BC005470 IPI:IPI00378163 RefSeq:NP_663603.3 UniGene:Mm.34489
            ProteinModelPortal:Q99K46 SMR:Q99K46 STRING:Q99K46
            PhosphoSite:Q99K46 PaxDb:Q99K46 PRIDE:Q99K46
            Ensembl:ENSMUST00000033383 GeneID:236733 KEGG:mmu:236733
            GeneTree:ENSGT00670000097750 InParanoid:B1AXB2 NextBio:383051
            Bgee:Q99K46 CleanEx:MM_USP11 Genevestigator:Q99K46
            GermOnline:ENSMUSG00000031066 Uniprot:Q99K46
        Length = 921

 Score = 108 (43.1 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   842 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 890


>UNIPROTKB|Q5D006 [details] [associations]
            symbol:Usp11 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:1303052
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:CH474009 HOGENOM:HOG000264375
            KO:K11835 MEROPS:C19.014 HOVERGEN:HBG000864 CTD:8237 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:BC090333 IPI:IPI00421768
            RefSeq:NP_001008861.2 UniGene:Rn.2492 Ensembl:ENSRNOT00000051956
            GeneID:408217 KEGG:rno:408217 InParanoid:Q5D006 NextBio:696448
            Genevestigator:Q5D006 Uniprot:Q5D006
        Length = 921

 Score = 108 (43.1 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   842 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 890


>UNIPROTKB|A1L506 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            MEROPS:C19.014 HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237
            GeneTree:ENSGT00670000097750 EMBL:DAAA02073014 EMBL:DAAA02073015
            EMBL:BT029793 IPI:IPI00824936 IPI:IPI00905233 RefSeq:NP_001073777.1
            UniGene:Bt.43412 Ensembl:ENSBTAT00000055593 GeneID:538948
            KEGG:bta:538948 InParanoid:A1L506 NextBio:20877682 Uniprot:A1L506
        Length = 756

 Score = 107 (42.7 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   676 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 724


>UNIPROTKB|K7GLG2 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GeneTree:ENSGT00670000097750 EMBL:FP710256
            Ensembl:ENSSSCT00000034750 Uniprot:K7GLG2
        Length = 756

 Score = 107 (42.7 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   676 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 724


>UNIPROTKB|J9PB02 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            Ensembl:ENSCAFT00000044288 Uniprot:J9PB02
        Length = 757

 Score = 107 (42.7 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   677 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 725


>UNIPROTKB|F1NQJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0000278 "mitotic cell cycle" evidence=IEA]
            [GO:0000790 "nuclear chromatin" evidence=IEA] [GO:0006281 "DNA
            repair" evidence=IEA] [GO:0016578 "histone deubiquitination"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0008234 GO:GO:0031647 GO:GO:0000790
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0016578
            GO:GO:0004221 GO:GO:0000278 GeneTree:ENSGT00690000102047
            OMA:DCLRSFT EMBL:AADN02040443 IPI:IPI00579359
            Ensembl:ENSGALT00000005420 Uniprot:F1NQJ6
        Length = 521

 Score = 105 (42.0 bits), Expect = 6.2e-05, P = 6.2e-05
 Identities = 24/57 (42%), Positives = 28/57 (49%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDS 59
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY +R   S
Sbjct:   462 VHHGSGVGSGHYTAYAAHEG--RWFHFNDSTVTLTDEETVVKAKAYILFYVERQAKS 516


>UNIPROTKB|J9P3M3 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11835
            CTD:8237 GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            RefSeq:NP_001183969.1 Ensembl:ENSCAFT00000047257 GeneID:404014
            KEGG:cfa:404014 Uniprot:J9P3M3
        Length = 770

 Score = 107 (42.7 bits), Expect = 6.3e-05, P = 6.3e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   690 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 738


>UNIPROTKB|E1C6K3 [details] [associations]
            symbol:E1C6K3 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00818801 Ensembl:ENSGALT00000040828
            Uniprot:E1C6K3
        Length = 376

 Score = 103 (41.3 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P + EWH FND  V          ++AY+LFY+
Sbjct:   327 GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 368


>UNIPROTKB|P51784 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase 11"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IDA] Reactome:REACT_17015 InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            EMBL:AL096791 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            MEROPS:C19.014 HOVERGEN:HBG000864 EMBL:BC140849 EMBL:BC000350
            EMBL:AB073597 EMBL:U44839 IPI:IPI00184533 RefSeq:NP_004642.2
            UniGene:Hs.171501 ProteinModelPortal:P51784 SMR:P51784
            DIP:DIP-27567N IntAct:P51784 MINT:MINT-1147600 STRING:P51784
            PhosphoSite:P51784 DMDM:251757432 PaxDb:P51784 PRIDE:P51784
            Ensembl:ENST00000218348 GeneID:8237 KEGG:hsa:8237 UCSC:uc004dhp.3
            CTD:8237 GeneCards:GC0XP047093 HGNC:HGNC:12609 HPA:HPA003103
            HPA:HPA037536 MIM:300050 neXtProt:NX_P51784 PharmGKB:PA37235
            InParanoid:P51784 OMA:GICGLTN PhylomeDB:P51784 ChiTaRS:USP11
            GenomeRNAi:8237 NextBio:30985 ArrayExpress:P51784 Bgee:P51784
            CleanEx:HS_USP11 Genevestigator:P51784 GermOnline:ENSG00000102226
            Uniprot:P51784
        Length = 963

 Score = 108 (43.1 bits), Expect = 6.5e-05, P = 6.5e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   883 GMRDGHYTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 931


>UNIPROTKB|J9NYC4 [details] [associations]
            symbol:USP43 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00680000099843
            EMBL:AAEX03003657 EMBL:AAEX03003658 EMBL:AAEX03003659
            Ensembl:ENSCAFT00000048667 Uniprot:J9NYC4
        Length = 1020

 Score = 108 (43.1 bits), Expect = 6.9e-05, P = 6.9e-05
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV E  P+DE +   AYILFY+KR+
Sbjct:   553 LQGGHYTAYCRNSLDGQWYSYDDSTV-EPLPEDEVNTRGAYILFYQKRN 600


>FB|FBgn0050421 [details] [associations]
            symbol:CG30421 species:7227 "Drosophila melanogaster"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 UCSC:CG30421-RA
            FlyBase:FBgn0050421 EMBL:AY060809 ProteinModelPortal:Q95SG4
            MEROPS:C19.A45 PRIDE:Q95SG4 InParanoid:Q95SG4 Bgee:Q95SG4
            Uniprot:Q95SG4
        Length = 1272

 Score = 109 (43.4 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/70 (35%), Positives = 40/70 (57%)

Query:     1 MCVRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE---DF--NNAYILFYKKR 55
             +C      +  GHYTA   +P  ++W+ F+D+ V  + P+D+   D   N AY+LFY++R
Sbjct:   862 VCYHQGDTLETGHYTAACKNPYDRQWYKFDDQRV-SKVPEDDIEQDIINNEAYMLFYQRR 920

Query:    56 DEDSDVEVSG 65
               D+  E SG
Sbjct:   921 SVDAG-ECSG 929


>UNIPROTKB|E2RFR2 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:AAEX03003657
            EMBL:AAEX03003658 EMBL:AAEX03003659 Ensembl:ENSCAFT00000027639
            Uniprot:E2RFR2
        Length = 1121

 Score = 108 (43.1 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 22/49 (44%), Positives = 32/49 (65%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV E  P+DE +   AYILFY+KR+
Sbjct:   654 LQGGHYTAYCRNSLDGQWYSYDDSTV-EPLPEDEVNTRGAYILFYQKRN 701


>UNIPROTKB|A5PKF9 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HOGENOM:HOG000264375
            MEROPS:C19.014 HOVERGEN:HBG000864 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:DAAA02073014 EMBL:DAAA02073015
            IPI:IPI00824936 UniGene:Bt.43412 EMBL:BC142473
            Ensembl:ENSBTAT00000022310 InParanoid:A5PKF9 Uniprot:A5PKF9
        Length = 910

 Score = 107 (42.7 bits), Expect = 7.8e-05, P = 7.8e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   830 GLRDGHYTTFACNKDSGQWHYFDDSSVSPVTENQIESKAAYVLFYQRQD 878


>UNIPROTKB|F1RWV6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:GICGLTN
            EMBL:FP710256 Ensembl:ENSSSCT00000013421 Uniprot:F1RWV6
        Length = 921

 Score = 107 (42.7 bits), Expect = 7.9e-05, P = 7.9e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   841 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 889


>UNIPROTKB|F1PWM6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            Ensembl:ENSCAFT00000023833 Uniprot:F1PWM6
        Length = 955

 Score = 107 (42.7 bits), Expect = 8.2e-05, P = 8.2e-05
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYT +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   875 GLRDGHYTTFACNKDSGQWHYFDDNSVSPVTENQIESKAAYVLFYQRQD 923


>UNIPROTKB|B4DWJ6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
            EMBL:AK301563 IPI:IPI01010279 SMR:B4DWJ6 STRING:B4DWJ6
            Ensembl:ENST00000539772 Uniprot:B4DWJ6
        Length = 271

 Score = 99 (39.9 bits), Expect = 9.7e-05, P = 9.7e-05
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:   212 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 259


>ASPGD|ASPL0000007671 [details] [associations]
            symbol:AN6354 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5560 KO:K11835 OrthoDB:EOG4FR40X
            RefSeq:XP_663958.1 ProteinModelPortal:Q5AZC6
            EnsemblFungi:CADANIAT00006630 GeneID:2871251 KEGG:ani:AN6354.2
            HOGENOM:HOG000166458 OMA:CVRSVEE Uniprot:Q5AZC6
        Length = 1418

 Score = 108 (43.1 bits), Expect = 0.00010, P = 0.00010
 Identities = 20/51 (39%), Positives = 33/51 (64%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQ-RPQDEDFNNAYILFYKKRDE 57
             G+  GHYTAY  +  T +W+ +ND +V     PQ+   ++AY+LFY++R +
Sbjct:  1141 GLGGGHYTAYAKNFMTGQWNEYNDSSVSRPIDPQNAVTSSAYLLFYRRRSD 1191


>UNIPROTKB|E1C8T4 [details] [associations]
            symbol:E1C8T4 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0005938 "cell cortex" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0042802 "identical protein binding" evidence=IEA]
            [GO:0045931 "positive regulation of mitotic cell cycle"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0050821 "protein stabilization" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005938 GO:GO:0048471 GO:GO:0050821
            GO:GO:0045931 GO:GO:0000122 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00670000098024 EMBL:AADN02041838
            EMBL:AADN02041840 IPI:IPI00971466 Ensembl:ENSGALT00000010915
            Uniprot:E1C8T4
        Length = 573

 Score = 103 (41.3 bits), Expect = 0.00012, P = 0.00012
 Identities = 19/42 (45%), Positives = 24/42 (57%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYK 53
             GHYTAY   P + EWH FND  V          ++AY+LFY+
Sbjct:   524 GHYTAYCKSPISSEWHSFNDSRVTPMSSSHVRSSDAYLLFYE 565


>UNIPROTKB|E2QZQ0 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 CTD:9960 KO:K11986 OMA:DCLRSFT
            EMBL:AAEX03016202 EMBL:AAEX03016201 RefSeq:XP_544715.3
            Ensembl:ENSCAFT00000026918 GeneID:487590 KEGG:cfa:487590
            NextBio:20861160 Uniprot:E2QZQ0
        Length = 520

 Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
 Identities = 26/56 (46%), Positives = 29/56 (51%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
             V    GV +GHYTAY  H     W +FND TV      DED      AYILFY +R
Sbjct:   461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLT---DEDTVVKAKAYILFYVER 511


>UNIPROTKB|F1N0I6 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0042393 "histone binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IEA]
            [GO:0006281 "DNA repair" evidence=IEA] [GO:0000790 "nuclear
            chromatin" evidence=IEA] [GO:0000278 "mitotic cell cycle"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006281 GO:GO:0008234 GO:GO:0031647
            GO:GO:0000790 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004221 GO:GO:0000278
            GeneTree:ENSGT00690000102047 OMA:DCLRSFT EMBL:DAAA02028746
            IPI:IPI00715279 Ensembl:ENSBTAT00000011598 Uniprot:F1N0I6
        Length = 521

 Score = 102 (41.0 bits), Expect = 0.00013, P = 0.00013
 Identities = 26/56 (46%), Positives = 29/56 (51%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDF---NNAYILFYKKR 55
             V    GV +GHYTAY  H     W +FND TV      DED      AYILFY +R
Sbjct:   462 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLT---DEDTVLKAKAYILFYVER 512


>ZFIN|ZDB-GENE-041212-59 [details] [associations]
            symbol:usp2a "ubiquitin specific peptidase 2a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
            Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
            Uniprot:E7FEC1
        Length = 600

 Score = 101 (40.6 bits), Expect = 0.00020, P = 0.00020
 Identities = 17/43 (39%), Positives = 25/43 (58%)

Query:    12 GHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK 54
             GHYTAY  +P   EW+ +ND  V          ++AY+LFY++
Sbjct:   557 GHYTAYCCNPENGEWYTYNDSRVTPMSASQVRSSDAYVLFYER 599


>UNIPROTKB|H0YLB7 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            ProteinModelPortal:H0YLB7 SMR:H0YLB7 Ensembl:ENST00000559711
            Bgee:H0YLB7 Uniprot:H0YLB7
        Length = 431

 Score = 99 (39.9 bits), Expect = 0.00021, P = 0.00021
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:   372 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 419


>RGD|628795 [details] [associations]
            symbol:Usp15 "ubiquitin specific peptidase 15" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;IDA] [GO:0005160 "transforming
            growth factor beta receptor binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007179 "transforming growth
            factor beta receptor signaling pathway" evidence=ISO;ISS]
            [GO:0008152 "metabolic process" evidence=ISO] [GO:0016579 "protein
            deubiquitination" evidence=ISO;IDA] [GO:0030509 "BMP signaling
            pathway" evidence=ISO;ISS] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=ISO;ISS] [GO:0046332 "SMAD binding"
            evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISO;ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:628795
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
            GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 HSSP:Q93009
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            MEROPS:C19.022 OrthoDB:EOG4DNF3R EMBL:AF106657 IPI:IPI00205801
            RefSeq:NP_660185.1 UniGene:Rn.161933 ProteinModelPortal:Q9R085
            SMR:Q9R085 STRING:Q9R085 PhosphoSite:Q9R085 PRIDE:Q9R085
            GeneID:171329 KEGG:rno:171329 NextBio:622082 Genevestigator:Q9R085
            Uniprot:Q9R085
        Length = 952

 Score = 103 (41.3 bits), Expect = 0.00022, P = 0.00022
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   857 GMGGGHYTAFAKNKDDGKWYYFDDSSV-SSASEDQIVSKAAYVLFYQRQD 905


>UNIPROTKB|H0YKU8 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            EMBL:AC118274 EMBL:AC007950 HGNC:HGNC:12626 ChiTaRS:USP3
            Ensembl:ENST00000559257 Uniprot:H0YKU8
        Length = 443

 Score = 99 (39.9 bits), Expect = 0.00022, P = 0.00022
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:   384 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 431


>UNIPROTKB|Q6JHV3 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            UniGene:Hs.458499 HGNC:HGNC:12626 HOVERGEN:HBG103589 ChiTaRS:USP3
            EMBL:AY461579 IPI:IPI01015614 SMR:Q6JHV3 STRING:Q6JHV3
            Ensembl:ENST00000268049 UCSC:uc002amh.3 Uniprot:Q6JHV3
        Length = 498

 Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:   439 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 486


>UNIPROTKB|H0YMI4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 EMBL:AC118274 EMBL:AC007950
            HGNC:HGNC:12626 ChiTaRS:USP3 ProteinModelPortal:H0YMI4 SMR:H0YMI4
            Ensembl:ENST00000558285 Bgee:H0YMI4 Uniprot:H0YMI4
        Length = 503

 Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:   444 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 491


>UNIPROTKB|Q9Y6I4 [details] [associations]
            symbol:USP3 "Ubiquitin carboxyl-terminal hydrolase 3"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0042393 "histone binding" evidence=IPI]
            [GO:0016578 "histone deubiquitination" evidence=IDA] [GO:0031647
            "regulation of protein stability" evidence=IDA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IMP] [GO:0000790
            "nuclear chromatin" evidence=IDA] [GO:0000278 "mitotic cell cycle"
            evidence=IMP] [GO:0006281 "DNA repair" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006281 GO:GO:0031647 GO:GO:0000790 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 EMBL:CH471082 GO:GO:0016578
            GO:GO:0004843 GO:GO:0004221 GO:GO:0000278 eggNOG:COG5533
            EMBL:AC118274 HOGENOM:HOG000231498 EMBL:AF073344 EMBL:BT007269
            EMBL:AK301236 EMBL:AC007950 EMBL:BC018113 EMBL:BC065300
            EMBL:BC107137 EMBL:BC107138 IPI:IPI00002330 IPI:IPI01008797
            RefSeq:NP_001243631.1 RefSeq:NP_006528.2 UniGene:Hs.458499
            ProteinModelPortal:Q9Y6I4 SMR:Q9Y6I4 IntAct:Q9Y6I4 STRING:Q9Y6I4
            MEROPS:C19.026 PhosphoSite:Q9Y6I4 PaxDb:Q9Y6I4 PRIDE:Q9Y6I4
            DNASU:9960 Ensembl:ENST00000380324 Ensembl:ENST00000540797
            GeneID:9960 KEGG:hsa:9960 UCSC:uc002amf.3 CTD:9960
            GeneCards:GC15P063796 H-InvDB:HIX0012328 HGNC:HGNC:12626 MIM:604728
            neXtProt:NX_Q9Y6I4 PharmGKB:PA37251 HOVERGEN:HBG103589
            InParanoid:Q9Y6I4 KO:K11986 OMA:DCLRSFT OrthoDB:EOG4G4GQC
            ChiTaRS:USP3 GenomeRNAi:9960 NextBio:37582 ArrayExpress:Q9Y6I4
            Bgee:Q9Y6I4 CleanEx:HS_USP3 Genevestigator:Q9Y6I4
            GermOnline:ENSG00000140455 Uniprot:Q9Y6I4
        Length = 520

 Score = 99 (39.9 bits), Expect = 0.00028, P = 0.00028
 Identities = 22/50 (44%), Positives = 25/50 (50%)

Query:     3 VRPSKGVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFY 52
             V    GV +GHYTAY  H     W +FND TV     +      AYILFY
Sbjct:   461 VHHGSGVGSGHYTAYATHEG--RWFHFNDSTVTLTDEETVVKAKAYILFY 508


>UNIPROTKB|Q2HJE4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=ISS] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR013792 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205
            GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:DAAA02013374 EMBL:DAAA02013375
            EMBL:DAAA02013376 EMBL:DAAA02013377 EMBL:DAAA02013378 EMBL:BC105521
            IPI:IPI00697254 RefSeq:NP_001039895.1 RefSeq:XP_003586138.1
            UniGene:Bt.29017 ProteinModelPortal:Q2HJE4 SMR:Q2HJE4
            MEROPS:C19.022 PRIDE:Q2HJE4 Ensembl:ENSBTAT00000037574
            GeneID:538284 KEGG:bta:538284 InParanoid:Q2HJE4 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R NextBio:20877322 Uniprot:Q2HJE4
        Length = 952

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   857 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 905


>UNIPROTKB|J9PBI4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03006985
            Ensembl:ENSCAFT00000048170 Uniprot:J9PBI4
        Length = 953

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   858 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 906


>UNIPROTKB|E9PCQ3 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 HGNC:HGNC:12613 ChiTaRS:USP15
            IPI:IPI00219505 ProteinModelPortal:E9PCQ3 SMR:E9PCQ3 PRIDE:E9PCQ3
            Ensembl:ENST00000393654 ArrayExpress:E9PCQ3 Bgee:E9PCQ3
            Uniprot:E9PCQ3
        Length = 956

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   861 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 909


>RGD|1587387 [details] [associations]
            symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISO;ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;ISS]
            [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
            evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=ISO;ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=ISO;ISS] [GO:0031647
            "regulation of protein stability" evidence=ISO;ISS] [GO:0031685
            "adenosine receptor binding" evidence=IEA;ISO] [GO:0034394 "protein
            localization to cell surface" evidence=ISO;ISS] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            RGD:1587387 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0031647 EMBL:CH473954 GO:GO:0006511
            PROSITE:PS50053 GO:GO:0034394 GO:GO:0031397 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375
            EMBL:BC166460 IPI:IPI00914176 RefSeq:NP_001128484.1
            UniGene:Rn.92126 ProteinModelPortal:B2GUZ1 SMR:B2GUZ1
            PhosphoSite:B2GUZ1 PRIDE:B2GUZ1 GeneID:290864 KEGG:rno:290864
            NextBio:631779 Genevestigator:B2GUZ1 Uniprot:B2GUZ1
        Length = 961

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D +V     +D+    A Y+LFY++RD++
Sbjct:   875 MGVGHYTAYAKNRLNGKWYYFDDSSV-SLASEDQIVTKAAYVLFYQRRDDE 924


>MGI|MGI:98905 [details] [associations]
            symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
            species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=ISO] [GO:0031647 "regulation of protein
            stability" evidence=ISO] [GO:0031685 "adenosine receptor binding"
            evidence=ISO] [GO:0034394 "protein localization to cell surface"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:98905
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 EMBL:CH466560
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            HOVERGEN:HBG000864 GeneTree:ENSGT00670000097750 CTD:7375
            OMA:CERISRY OrthoDB:EOG4C5CHR MEROPS:C19.010 EMBL:L00681
            EMBL:AF026469 EMBL:AK089425 EMBL:AK143582 EMBL:AK149964
            EMBL:AK169933 EMBL:AK171271 IPI:IPI00115701 PIR:I58376
            RefSeq:NP_035808.2 UniGene:Mm.3974 PDB:3JYU PDBsum:3JYU
            ProteinModelPortal:P35123 SMR:P35123 STRING:P35123
            PhosphoSite:P35123 PaxDb:P35123 PRIDE:P35123
            Ensembl:ENSMUST00000035237 GeneID:22258 KEGG:mmu:22258
            InParanoid:Q8BTL9 EvolutionaryTrace:P35123 NextBio:302345
            Bgee:P35123 CleanEx:MM_USP4 Genevestigator:P35123
            GermOnline:ENSMUSG00000032612 Uniprot:P35123
        Length = 962

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/51 (37%), Positives = 32/51 (62%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D +V     +D+    A Y+LFY++RD++
Sbjct:   876 MGVGHYTAYAKNRLNGKWYYFDDSSV-SLASEDQIVTKAAYVLFYQRRDDE 925


>UNIPROTKB|Q13107 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IMP] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031685
            "adenosine receptor binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0034394 "protein localization to cell surface"
            evidence=IDA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=IMP] [GO:0031647 "regulation of protein
            stability" evidence=IDA] [GO:0005764 "lysosome" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0046872
            GO:GO:0005764 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 EMBL:AC121247 eggNOG:COG5560 HOGENOM:HOG000264375
            KO:K11835 HOVERGEN:HBG000864 CTD:7375 OMA:CERISRY EMBL:U20657
            EMBL:AF017305 EMBL:AF017306 EMBL:AK291795 EMBL:BC068017
            EMBL:BC125130 IPI:IPI00011836 IPI:IPI00216257 IPI:IPI00927927
            PIR:T09478 RefSeq:NP_001238806.1 RefSeq:NP_003354.2
            RefSeq:NP_955475.1 UniGene:Hs.403828 UniGene:Hs.77500 PDB:2Y6E
            PDBsum:2Y6E ProteinModelPortal:Q13107 SMR:Q13107 IntAct:Q13107
            STRING:Q13107 MEROPS:C19.010 PhosphoSite:Q13107 DMDM:116242839
            PaxDb:Q13107 PRIDE:Q13107 Ensembl:ENST00000265560
            Ensembl:ENST00000351842 Ensembl:ENST00000416417 GeneID:7375
            KEGG:hsa:7375 UCSC:uc003cwp.2 UCSC:uc003cwr.2 GeneCards:GC03M049290
            HGNC:HGNC:12627 HPA:HPA018499 MIM:603486 neXtProt:NX_Q13107
            PharmGKB:PA37252 InParanoid:Q13107 PhylomeDB:Q13107 ChiTaRS:USP4
            EvolutionaryTrace:Q13107 GenomeRNAi:7375 NextBio:28880
            ArrayExpress:Q13107 Bgee:Q13107 CleanEx:HS_USP4
            Genevestigator:Q13107 GermOnline:ENSG00000114316 Uniprot:Q13107
        Length = 963

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D  V     +D+    A Y+LFY++RD++
Sbjct:   877 MGVGHYTAYAKNKLNGKWYYFDDSNV-SLASEDQIVTKAAYVLFYQRRDDE 926


>UNIPROTKB|F1SPT0 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0034394 "protein localization to cell
            surface" evidence=IEA] [GO:0031685 "adenosine receptor binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11835
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:FP326740
            RefSeq:NP_001230117.1 UniGene:Ssc.23825 UniGene:Ssc.2787
            Ensembl:ENSSSCT00000012460 GeneID:100512072 KEGG:ssc:100512072
            Uniprot:F1SPT0
        Length = 963

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D  V     +D+    A Y+LFY++RD++
Sbjct:   877 MGVGHYTAYAKNKLNGKWYYFDDSNV-SLASEDQIVTKAAYVLFYQRRDDE 926


>UNIPROTKB|Q5RCD3 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=ISS] [GO:0031647 "regulation of
            protein stability" evidence=ISS] [GO:0034394 "protein localization
            to cell surface" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375 EMBL:CR858339
            RefSeq:NP_001125307.1 UniGene:Pab.8716 HSSP:Q9Y4E8
            ProteinModelPortal:Q5RCD3 SMR:Q5RCD3 PRIDE:Q5RCD3 GeneID:100172206
            KEGG:pon:100172206 InParanoid:Q5RCD3 Uniprot:Q5RCD3
        Length = 963

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D  V     +D+    A Y+LFY++RD++
Sbjct:   877 MGVGHYTAYAKNKLNGKWYYFDDSNV-SLASEDQIVTKAAYVLFYQRRDDE 926


>UNIPROTKB|E2R6J5 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0034394 "protein
            localization to cell surface" evidence=IEA] [GO:0031685 "adenosine
            receptor binding" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11835
            GeneTree:ENSGT00670000097750 CTD:7375 OMA:CERISRY EMBL:AAEX03012231
            RefSeq:XP_533829.3 Ensembl:ENSCAFT00000018443 GeneID:476624
            KEGG:cfa:476624 NextBio:20852247 Uniprot:E2R6J5
        Length = 964

 Score = 102 (41.0 bits), Expect = 0.00028, P = 0.00028
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D  V     +D+    A Y+LFY++RD++
Sbjct:   877 MGVGHYTAYAKNKLNGKWYYFDDSNV-SLASEDQIVTKAAYVLFYQRRDDE 926


>UNIPROTKB|Q9Y4E8 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0016579
            "protein deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IDA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=IMP;IDA;TAS] [GO:0030509 "BMP signaling pathway"
            evidence=IDA] [GO:0046332 "SMAD binding" evidence=IPI] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IMP]
            [GO:0005160 "transforming growth factor beta receptor binding"
            evidence=IPI] [GO:0030512 "negative regulation of transforming
            growth factor beta receptor signaling pathway" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111102 GO:GO:0006508
            GO:GO:0030509 GO:GO:0007179 GO:GO:0060389 GO:GO:0006511
            GO:GO:0008233 SUPFAM:SSF55205 GO:GO:0004197 GO:GO:0030512
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5560
            HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864 MEROPS:C19.022
            OMA:RMDPLAK OrthoDB:EOG4DNF3R EMBL:AF106069 EMBL:AB011101
            EMBL:AF153604 EMBL:AK023703 EMBL:AK292337 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 EMBL:BC020688 EMBL:BC063454
            EMBL:BC125123 EMBL:AF013990 IPI:IPI00000728 IPI:IPI00219504
            IPI:IPI01015293 RefSeq:NP_001239007.1 RefSeq:NP_001239008.1
            RefSeq:NP_006304.1 UniGene:Hs.434951 PDB:1W6V PDB:3LMN PDB:3PPA
            PDB:3PV1 PDB:3T9L PDB:4A3O PDB:4A3P PDBsum:1W6V PDBsum:3LMN
            PDBsum:3PPA PDBsum:3PV1 PDBsum:3T9L PDBsum:4A3O PDBsum:4A3P
            ProteinModelPortal:Q9Y4E8 SMR:Q9Y4E8 IntAct:Q9Y4E8 STRING:Q9Y4E8
            PhosphoSite:Q9Y4E8 DMDM:28381406 PaxDb:Q9Y4E8 PRIDE:Q9Y4E8
            DNASU:9958 Ensembl:ENST00000280377 Ensembl:ENST00000312635
            Ensembl:ENST00000353364 GeneID:9958 KEGG:hsa:9958 UCSC:uc001srb.2
            UCSC:uc001src.2 CTD:9958 GeneCards:GC12P062706 H-InvDB:HIX0010773
            HGNC:HGNC:12613 HPA:HPA006237 MIM:604731 neXtProt:NX_Q9Y4E8
            PharmGKB:PA37239 InParanoid:Q9Y4E8 PhylomeDB:Q9Y4E8 ChiTaRS:USP15
            EvolutionaryTrace:Q9Y4E8 GenomeRNAi:9958 NextBio:37576
            ArrayExpress:Q9Y4E8 Bgee:Q9Y4E8 CleanEx:HS_USP15
            Genevestigator:Q9Y4E8 GermOnline:ENSG00000135655 Uniprot:Q9Y4E8
        Length = 981

 Score = 102 (41.0 bits), Expect = 0.00029, P = 0.00029
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   886 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 934


>MGI|MGI:101857 [details] [associations]
            symbol:Usp15 "ubiquitin specific peptidase 15" species:10090
            "Mus musculus" [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISO]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005160 "transforming growth factor beta
            receptor binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007179 "transforming growth factor beta
            receptor signaling pathway" evidence=ISO] [GO:0008152 "metabolic
            process" evidence=IDA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030509 "BMP
            signaling pathway" evidence=ISO] [GO:0035520 "monoubiquitinated
            protein deubiquitination" evidence=ISO] [GO:0046332 "SMAD binding"
            evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISO] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:101857
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
            GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 EMBL:CH466578
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 MEROPS:C19.022 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R CTD:9958 ChiTaRS:USP15 EMBL:AF468037
            EMBL:AK046332 EMBL:AK083303 EMBL:AK133852 EMBL:AK145749
            EMBL:AK161469 EMBL:AK168755 EMBL:AK122301 EMBL:BC050042
            IPI:IPI00154012 IPI:IPI00222152 IPI:IPI00222154 IPI:IPI00403342
            RefSeq:NP_081880.2 UniGene:Mm.244209 UniGene:Mm.470032
            ProteinModelPortal:Q8R5H1 SMR:Q8R5H1 STRING:Q8R5H1
            PhosphoSite:Q8R5H1 PaxDb:Q8R5H1 PRIDE:Q8R5H1
            Ensembl:ENSMUST00000020334 GeneID:14479 KEGG:mmu:14479
            UCSC:uc007hgn.1 UCSC:uc007hgt.1 UCSC:uc011xpf.1 InParanoid:Q8R5H1
            NextBio:286150 Bgee:Q8R5H1 CleanEx:MM_USP15 Genevestigator:Q8R5H1
            GermOnline:ENSMUSG00000020124 Uniprot:Q8R5H1
        Length = 981

 Score = 102 (41.0 bits), Expect = 0.00029, P = 0.00029
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   886 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 934


>UNIPROTKB|E2R988 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IEA]
            [GO:0046332 "SMAD binding" evidence=IEA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IEA]
            [GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005160 "transforming growth factor
            beta receptor binding" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00670000097750 OMA:RMDPLAK
            EMBL:AAEX03006985 Ensembl:ENSCAFT00000000496 Uniprot:E2R988
        Length = 982

 Score = 102 (41.0 bits), Expect = 0.00029, P = 0.00029
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   887 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 935


>UNIPROTKB|F1SKD5 [details] [associations]
            symbol:LOC100737425 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AEMK01054830
            EMBL:AEMK01054840 EMBL:CU570842 EMBL:CU856603 EMBL:CU928889
            Ensembl:ENSSSCT00000000493 Uniprot:F1SKD5
        Length = 982

 Score = 102 (41.0 bits), Expect = 0.00029, P = 0.00029
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   887 GMGGGHYTAFAKNKDDGKWYYFDDSSV-STASEDQIVSKAAYVLFYQRQD 935


>UNIPROTKB|F6Z5C0 [details] [associations]
            symbol:usp15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 KO:K11835 MEROPS:C19.022
            EMBL:AAMC01103598 EMBL:AAMC01103599 EMBL:AAMC01103600
            EMBL:AAMC01103601 EMBL:BC166318 RefSeq:NP_001121498.1
            GeneID:100158604 KEGG:xtr:100158604 Xenbase:XB-GENE-1008519
            Uniprot:F6Z5C0
        Length = 982

 Score = 102 (41.0 bits), Expect = 0.00029, P = 0.00029
 Identities = 17/49 (34%), Positives = 30/49 (61%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +      AY+LFY+++D
Sbjct:   886 GMGGGHYTAFAKNKDDGKWYYFDDSSVSTASEEQIVSKAAYVLFYQRQD 934


>RGD|2303824 [details] [associations]
            symbol:Usp43 "ubiquitin specific peptidase 43" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:2303824 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            IPI:IPI00951601 Ensembl:ENSRNOT00000065911 UCSC:RGD:2303824
            ArrayExpress:F1M3F6 Uniprot:F1M3F6
        Length = 1113

 Score = 102 (41.0 bits), Expect = 0.00033, P = 0.00033
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV   R  + +   AYILFY+KR+
Sbjct:   645 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 692


>UNIPROTKB|F1LZN0 [details] [associations]
            symbol:Usp43_predicted "Ubiquitin carboxyl-terminal
            hydrolase" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00952243 Ensembl:ENSRNOT00000066429
            ArrayExpress:F1LZN0 Uniprot:F1LZN0
        Length = 1118

 Score = 102 (41.0 bits), Expect = 0.00034, P = 0.00034
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV   R  + +   AYILFY+KR+
Sbjct:   645 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 692


>UNIPROTKB|Q70EL4 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CH471108 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AC027045 HSSP:P54578 eggNOG:COG5560
            EMBL:AJ583817 EMBL:AK055188 EMBL:AK090821 EMBL:AC118755
            EMBL:BC144041 IPI:IPI00166377 IPI:IPI00176488 IPI:IPI00739286
            RefSeq:NP_001254505.1 RefSeq:NP_694942.3 UniGene:Hs.709621
            ProteinModelPortal:Q70EL4 IntAct:Q70EL4 MINT:MINT-3976419
            STRING:Q70EL4 MEROPS:C19.976 PhosphoSite:Q70EL4 DMDM:296452852
            PaxDb:Q70EL4 PRIDE:Q70EL4 Ensembl:ENST00000285199
            Ensembl:ENST00000570827 Ensembl:ENST00000573955
            Ensembl:ENST00000574408 GeneID:124739 KEGG:hsa:124739
            UCSC:uc002gma.4 UCSC:uc002gmc.4 CTD:124739 GeneCards:GC17P009489
            H-InvDB:HIX0013531 HGNC:HGNC:20072 HPA:HPA023389 HPA:HPA027762
            neXtProt:NX_Q70EL4 PharmGKB:PA134865304 HOGENOM:HOG000293426
            HOVERGEN:HBG094126 InParanoid:Q70EL4 KO:K11856 OMA:RSISMKA
            OrthoDB:EOG4DR9BH GenomeRNAi:124739 NextBio:81362
            ArrayExpress:Q70EL4 Bgee:Q70EL4 CleanEx:HS_USP43
            Genevestigator:Q70EL4 GermOnline:ENSG00000154914 Uniprot:Q70EL4
        Length = 1123

 Score = 102 (41.0 bits), Expect = 0.00034, P = 0.00034
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV   R  + +   AYILFY+KR+
Sbjct:   664 LQGGHYTAYCRNSLDGQWYSYDDSTVEPLREDEVNTRGAYILFYQKRN 711


>MGI|MGI:2444541 [details] [associations]
            symbol:Usp43 "ubiquitin specific peptidase 43" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:2444541 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 HSSP:P40818 eggNOG:COG5560 CTD:124739
            HOGENOM:HOG000293426 HOVERGEN:HBG094126 KO:K11856 OMA:RSISMKA
            OrthoDB:EOG4DR9BH EMBL:AL732570 EMBL:AK083271 EMBL:BC021474
            IPI:IPI00225521 IPI:IPI00788336 RefSeq:NP_776115.2
            UniGene:Mm.158885 ProteinModelPortal:Q8BUM9 MEROPS:C19.979
            PhosphoSite:Q8BUM9 PRIDE:Q8BUM9 Ensembl:ENSMUST00000021288
            GeneID:216835 KEGG:mmu:216835 UCSC:uc007jne.1
            GeneTree:ENSGT00680000099843 InParanoid:Q8BUM9 NextBio:375380
            Bgee:Q8BUM9 CleanEx:MM_USP43 Genevestigator:Q8BUM9
            GermOnline:ENSMUSG00000020905 Uniprot:Q8BUM9
        Length = 1132

 Score = 102 (41.0 bits), Expect = 0.00034, P = 0.00034
 Identities = 19/48 (39%), Positives = 29/48 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV   R  + +   AYILFY+KR+
Sbjct:   664 LQGGHYTAYCRNSLDGQWYSYDDSTVEALREDEVNTRGAYILFYQKRN 711


>UNIPROTKB|H0YCV3 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0006511
            GO:GO:0004221 HGNC:HGNC:20059 ChiTaRS:USP33 EMBL:AC114487
            Ensembl:ENST00000481579 Uniprot:H0YCV3
        Length = 456

 Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   275 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 327


>RGD|1303052 [details] [associations]
            symbol:Usp11 "ubiquitin specific peptidase 11" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=TAS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS50235 RGD:1303052 GO:GO:0005634 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004221 MEROPS:C19.014 HOVERGEN:HBG000864
            IPI:IPI00421768 UniGene:Rn.2492 EMBL:BN000322
            ProteinModelPortal:Q6IE71 PRIDE:Q6IE71 UCSC:RGD:1303052
            InParanoid:Q6IE71 ArrayExpress:Q6IE71 Genevestigator:Q6IE71
            Uniprot:Q6IE71
        Length = 700

 Score = 99 (39.9 bits), Expect = 0.00040, P = 0.00040
 Identities = 16/49 (32%), Positives = 29/49 (59%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GH T +  + ++ +WHYF+D +V        +   AY+LFY+++D
Sbjct:   621 GMRDGHCTTFACNKDSGQWHYFDDNSVSPVNENQIESKAAYVLFYQRQD 669


>UNIPROTKB|A6QR55 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0034394 "protein
            localization to cell surface" evidence=ISS] [GO:0031647 "regulation
            of protein stability" evidence=ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] [GO:0031685 "adenosine
            receptor binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:BC150120 IPI:IPI00697204
            RefSeq:NP_001093789.1 UniGene:Bt.52457 ProteinModelPortal:A6QR55
            SMR:A6QR55 PRIDE:A6QR55 Ensembl:ENSBTAT00000015787 GeneID:508042
            KEGG:bta:508042 CTD:7375 InParanoid:A6QR55 OMA:CERISRY
            OrthoDB:EOG4C5CHR NextBio:20868329 Uniprot:A6QR55
        Length = 963

 Score = 100 (40.3 bits), Expect = 0.00046, P = 0.00046
 Identities = 19/51 (37%), Positives = 31/51 (60%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRDED 58
             +  GHYTAY  +    +W+YF+D  V     +D+    A Y+LFY++RD++
Sbjct:   877 MGVGHYTAYAKNKLNGKWYYFDDSNV-SLACEDQIVTKAAYVLFYQRRDDE 926


>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
            symbol:usp33 "ubiquitin specific peptidase 33"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
            RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
            SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
            NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
        Length = 897

 Score = 98 (39.6 bits), Expect = 0.00070, P = 0.00070
 Identities = 19/53 (35%), Positives = 31/53 (58%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +   + W+ F+D++V E          AY+LFYKK ++++  E
Sbjct:   625 SSGHYIAYCRNELNQLWYEFDDQSVTEVSESCVQNAEAYVLFYKKSNDETQKE 677


>TAIR|locus:2139222 [details] [associations]
            symbol:UBP10 "AT4G10590" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 HSSP:P40818
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            ProtClustDB:CLSN2689389 EMBL:AY054463 EMBL:BT010363 IPI:IPI00534120
            PIR:T04194 RefSeq:NP_567363.1 RefSeq:NP_849356.1 UniGene:At.10964
            UniGene:At.67146 ProteinModelPortal:Q93Y01 SMR:Q93Y01
            MEROPS:C19.A03 PaxDb:Q93Y01 PRIDE:Q93Y01 EnsemblPlants:AT4G10590.1
            EnsemblPlants:AT4G10590.2 GeneID:826651 KEGG:ath:AT4G10590
            TAIR:At4g10590 InParanoid:Q93Y01 OMA:MDQDILL PhylomeDB:Q93Y01
            Genevestigator:Q93Y01 Uniprot:Q93Y01
        Length = 910

 Score = 98 (39.6 bits), Expect = 0.00071, P = 0.00071
 Identities = 21/60 (35%), Positives = 32/60 (53%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKK---RDEDSDVEVS 64
             G+  GHYTAY    +  EW++F+D  V      +   + AY+LFY++     E   VE+S
Sbjct:   847 GLGGGHYTAYAKLIDDNEWYHFDDSHVSSVNESEIKNSAAYVLFYRRVRSETETQTVEMS 906


>FB|FBgn0031187 [details] [associations]
            symbol:CG14619 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
            GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
            GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
            FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
            EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
            RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
            EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
            InParanoid:Q8IQ27 Uniprot:Q8IQ27
        Length = 938

 Score = 98 (39.6 bits), Expect = 0.00073, P = 0.00073
 Identities = 18/46 (39%), Positives = 29/46 (63%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNN-AYILFYKK 54
             + GHY A   HP +++WH FND  V +   ++   ++ AYILFY++
Sbjct:   892 AGGHYVALCKHPVSRKWHEFNDNIVSDALSENHLVSSSAYILFYER 937


>UNIPROTKB|E1C719 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00822334 Ensembl:ENSGALT00000015893 Uniprot:E1C719
        Length = 953

 Score = 98 (39.6 bits), Expect = 0.00075, P = 0.00075
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V            AY+LFY+++D
Sbjct:   857 GMGGGHYTAFAKNKDDGKWYYFDDSSVSIACEDQITSKAAYVLFYQRQD 905


>UNIPROTKB|F1NFR2 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00575554 Ensembl:ENSGALT00000030681 Uniprot:F1NFR2
        Length = 955

 Score = 98 (39.6 bits), Expect = 0.00075, P = 0.00075
 Identities = 18/50 (36%), Positives = 33/50 (66%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNA-YILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V     +D+  + A Y+LFY+++D
Sbjct:   859 GMGGGHYTAFAKNKDDGKWYYFDDSSV-SIACEDQIVSKAAYVLFYQRQD 907


>UNIPROTKB|E1C718 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007179 "transforming growth factor beta receptor
            signaling pathway" evidence=IEA] [GO:0030509 "BMP signaling
            pathway" evidence=IEA] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IEA] [GO:0046332 "SMAD binding"
            evidence=IEA] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AADN02009940
            EMBL:AADN02009941 IPI:IPI00580087 Ensembl:ENSGALT00000015894
            Uniprot:E1C718
        Length = 981

 Score = 98 (39.6 bits), Expect = 0.00077, P = 0.00077
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRD 56
             G+  GHYTA+  + +  +W+YF+D +V            AY+LFY+++D
Sbjct:   885 GMGGGHYTAFAKNKDDGKWYYFDDSSVSIACEDQITSKAAYVLFYQRQD 933


>UNIPROTKB|I3L7M6 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
            Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
        Length = 901

 Score = 97 (39.2 bits), Expect = 0.00090, P = 0.00089
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   631 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 683


>UNIPROTKB|F1SS87 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            CTD:124739 KO:K11856 OMA:RSISMKA GeneTree:ENSGT00680000099843
            EMBL:CU929537 RefSeq:XP_003132035.1 UniGene:Ssc.22285
            Ensembl:ENSSSCT00000019584 GeneID:100515447 KEGG:ssc:100515447
            Uniprot:F1SS87
        Length = 1123

 Score = 98 (39.6 bits), Expect = 0.00090, P = 0.00090
 Identities = 21/49 (42%), Positives = 31/49 (63%)

Query:     9 VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDE-DFNNAYILFYKKRD 56
             +  GHYTAY  +    +W+ ++D TV E   +DE +   AYILFY+KR+
Sbjct:   666 LQGGHYTAYCRNSLDGQWYSYDDSTV-EPLLEDEVNTRGAYILFYQKRN 713


>MGI|MGI:2159711 [details] [associations]
            symbol:Usp33 "ubiquitin specific peptidase 33" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IMP] [GO:0008152 "metabolic
            process" evidence=ISA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISO] [GO:0016477 "cell migration"
            evidence=IMP] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0044297 "cell
            body" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 MGI:MGI:2159711 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 HSSP:Q93009
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:AF383174 EMBL:BC005506 EMBL:BC031366
            EMBL:BC089315 EMBL:AK143844 IPI:IPI00319995 IPI:IPI00798461
            RefSeq:NP_001239415.1 RefSeq:NP_573510.2 UniGene:Mm.258320
            ProteinModelPortal:Q8R5K2 SMR:Q8R5K2 STRING:Q8R5K2
            PhosphoSite:Q8R5K2 PaxDb:Q8R5K2 PRIDE:Q8R5K2 DNASU:170822
            Ensembl:ENSMUST00000026507 Ensembl:ENSMUST00000117492 GeneID:170822
            KEGG:mmu:170822 UCSC:uc008rti.1 UCSC:uc008rtj.1 InParanoid:Q8R5K2
            NextBio:370477 Bgee:Q8R5K2 Genevestigator:Q8R5K2 Uniprot:Q8R5K2
        Length = 909

 Score = 97 (39.2 bits), Expect = 0.00090, P = 0.00090
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   637 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 689


>UNIPROTKB|E1BWB2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
            EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
            UniGene:Gga.26668 ProteinModelPortal:E1BWB2
            Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
            NextBio:20826873 Uniprot:E1BWB2
        Length = 910

 Score = 97 (39.2 bits), Expect = 0.00091, P = 0.00091
 Identities = 19/53 (35%), Positives = 30/53 (56%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K +E++  E
Sbjct:   638 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSNEEAQRE 690


>UNIPROTKB|A6QNM7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9913 "Bos taurus" [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0001664
            "G-protein coupled receptor binding" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:BC148905 IPI:IPI00708909
            RefSeq:NP_001094609.1 UniGene:Bt.46098 ProteinModelPortal:A6QNM7
            SMR:A6QNM7 STRING:A6QNM7 MEROPS:C19.037 Ensembl:ENSBTAT00000027667
            GeneID:531706 KEGG:bta:531706 CTD:23032 InParanoid:A6QNM7
            OMA:TMEEDKS OrthoDB:EOG4B8JC9 NextBio:20875513 Uniprot:A6QNM7
        Length = 912

 Score = 97 (39.2 bits), Expect = 0.00091, P = 0.00091
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   640 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 692


>UNIPROTKB|J9NW59 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
        Length = 912

 Score = 97 (39.2 bits), Expect = 0.00091, P = 0.00091
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   640 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 692


>UNIPROTKB|Q5REG5 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037
            CTD:23032 EMBL:CR857564 EMBL:CR860104 RefSeq:NP_001124855.1
            UniGene:Pab.19411 ProteinModelPortal:Q5REG5 SMR:Q5REG5
            GeneID:100171716 KEGG:pon:100171716 InParanoid:Q5REG5
            Uniprot:Q5REG5
        Length = 914

 Score = 97 (39.2 bits), Expect = 0.00091, P = 0.00091
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   638 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 690


>UNIPROTKB|Q8TEY7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9606 "Homo sapiens" [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0030891 "VCB complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=TAS] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=IMP] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IMP] [GO:0008270 "zinc ion
            binding" evidence=IDA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IDA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0007411 "axon guidance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 EMBL:AF383172 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 GO:GO:0030891
            eggNOG:COG5560 HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848
            MEROPS:C19.037 CTD:23032 OMA:TMEEDKS EMBL:AF383173 EMBL:AB029020
            EMBL:AK022864 EMBL:BC016663 IPI:IPI00236901 IPI:IPI00377264
            IPI:IPI00402757 RefSeq:NP_055832.3 RefSeq:NP_963918.1
            RefSeq:NP_963920.1 UniGene:Hs.480597 PDB:2UZG PDBsum:2UZG
            ProteinModelPortal:Q8TEY7 SMR:Q8TEY7 DIP:DIP-48942N IntAct:Q8TEY7
            MINT:MINT-1370210 STRING:Q8TEY7 PhosphoSite:Q8TEY7 DMDM:116242838
            PaxDb:Q8TEY7 PRIDE:Q8TEY7 DNASU:23032 Ensembl:ENST00000357428
            Ensembl:ENST00000370792 Ensembl:ENST00000370793
            Ensembl:ENST00000370794 GeneID:23032 KEGG:hsa:23032 UCSC:uc001dhs.3
            UCSC:uc001dhw.3 GeneCards:GC01M078161 H-InvDB:HIX0159957
            HGNC:HGNC:20059 HPA:HPA005719 neXtProt:NX_Q8TEY7
            PharmGKB:PA134955343 InParanoid:Q8TEY7 PhylomeDB:Q8TEY7
            ChiTaRS:USP33 EvolutionaryTrace:Q8TEY7 GenomeRNAi:23032
            NextBio:44018 ArrayExpress:Q8TEY7 Bgee:Q8TEY7 CleanEx:HS_USP33
            Genevestigator:Q8TEY7 GermOnline:ENSG00000077254 Uniprot:Q8TEY7
        Length = 942

 Score = 97 (39.2 bits), Expect = 0.00094, P = 0.00094
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   670 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 722


>UNIPROTKB|F1P6Y2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
            Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
        Length = 947

 Score = 97 (39.2 bits), Expect = 0.00095, P = 0.00095
 Identities = 19/53 (35%), Positives = 29/53 (54%)

Query:    10 SAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKRDEDSDVE 62
             S+GHY AY  +     W+ F+D++V E          AY+LFY+K  E++  E
Sbjct:   673 SSGHYIAYCRNNLNNLWYEFDDQSVTEVSESTVQNAEAYVLFYRKSSEEAQKE 725


>UNIPROTKB|F1SU01 [details] [associations]
            symbol:F1SU01 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00630000089581 EMBL:CU915824
            Ensembl:ENSSSCT00000003906 Uniprot:F1SU01
        Length = 375

 Score = 79 (32.9 bits), Expect = 0.00097, Sum P(2) = 0.00097
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query:     7 KGVSA--GHYTAYTLHPNTKEWHYFNDETV 34
             +GVSA  GHY A+   P + EW+ FNDE +
Sbjct:    23 RGVSAYSGHYIAHVKDPQSGEWYKFNDEDI 52

 Score = 32 (16.3 bits), Expect = 0.00097, Sum P(2) = 0.00097
 Identities = 5/13 (38%), Positives = 10/13 (76%)

Query:    46 NAYILFYKKRDED 58
             NAY+L Y+ + ++
Sbjct:    90 NAYMLVYRLQTQE 102


>POMBASE|SPCC1494.05c [details] [associations]
            symbol:ubp12 "CSN-associated deubiquitinating enzyme
            Ubp12" species:4896 "Schizosaccharomyces pombe" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISM] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 PomBase:SPCC1494.05c
            GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 KO:K11835 PIR:T41006 RefSeq:NP_588530.1
            ProteinModelPortal:O60079 STRING:O60079 MEROPS:C19.A64
            EnsemblFungi:SPCC1494.05c.1 GeneID:2538990 KEGG:spo:SPCC1494.05c
            OMA:HERVENK OrthoDB:EOG4FR40X NextBio:20800165 Uniprot:O60079
        Length = 979

 Score = 97 (39.2 bits), Expect = 0.00099, P = 0.00099
 Identities = 16/48 (33%), Positives = 31/48 (64%)

Query:     8 GVSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
             G+  GHYTA+  +P+  +++ F+D  V    P++   + AY+LFY+++
Sbjct:   930 GLGGGHYTAFAKNPDNGQFYCFDDSRVTPVCPEETVTSAAYLLFYRRK 977


>POMBASE|SPAC13A11.04c [details] [associations]
            symbol:ubp8 "SAGA complex ubiquitin C-terminal
            hydrolase Ubp8" species:4896 "Schizosaccharomyces pombe"
            [GO:0000124 "SAGA complex" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISM] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005654 "nucleoplasm" evidence=IDA]
            [GO:0006338 "chromatin remodeling" evidence=IC] [GO:0006357
            "regulation of transcription from RNA polymerase II promoter"
            evidence=EXP;IC] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016573 "histone acetylation" evidence=IC] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0035616 "histone H2B conserved
            C-terminal lysine deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 PomBase:SPAC13A11.04c
            EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0046872 GO:GO:0008270
            GO:GO:0016573 GO:GO:0006357 GO:GO:0006338 GO:GO:0000124
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5077 KO:K11366 OMA:IHEHAKA PIR:T37611
            RefSeq:NP_592992.1 ProteinModelPortal:Q09738 STRING:Q09738
            MEROPS:C19.A61 EnsemblFungi:SPAC13A11.04c.1 GeneID:2542135
            KEGG:spo:SPAC13A11.04c OrthoDB:EOG4X3M8J NextBio:20803207
            GO:GO:0035616 Uniprot:Q09738
        Length = 449

 Score = 93 (37.8 bits), Expect = 0.00099, P = 0.00099
 Identities = 19/50 (38%), Positives = 30/50 (60%)

Query:     7 KG-VSAGHYTAYTLHPNTKEWHYFNDETVLEQRPQDEDFNNAYILFYKKR 55
             KG +  GHY AYT + N  +W   +D T++E +  +   + AY+LFY +R
Sbjct:   388 KGTLDTGHYIAYTYYQN--QWFLLDDTTIVEVKESEVLNSQAYLLFYHER 435


>UNIPROTKB|Q5ZM45 [details] [associations]
            symbol:USP48 "Ubiquitin carboxyl-terminal hydrolase 48"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            InterPro:IPR000626 InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00240 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00213
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0008234 GO:GO:0006511 InterPro:IPR019955 PROSITE:PS50053
            GO:GO:0004221 eggNOG:COG5077 HSSP:P54578 MEROPS:C19.068 KO:K11858
            EMBL:AJ719539 IPI:IPI00571210 RefSeq:NP_001073211.1
            UniGene:Gga.20232 ProteinModelPortal:Q5ZM45 GeneID:769457
            KEGG:gga:769457 CTD:84196 HOGENOM:HOG000231639 HOVERGEN:HBG080368
            InParanoid:Q5ZM45 OrthoDB:EOG4GF3DC NextBio:20919686 Uniprot:Q5ZM45
        Length = 1033

 Score = 83 (34.3 bits), Expect = 0.0010, Sum P(2) = 0.0010
 Identities = 16/30 (53%), Positives = 20/30 (66%)

Query:     7 KGVSA--GHYTAYTLHPNTKEWHYFNDETV 34
             +GVSA  GHY A+   P T EW+ FNDE +
Sbjct:   343 RGVSAYSGHYIAHVKDPQTGEWYKFNDEDI 372

 Score = 38 (18.4 bits), Expect = 0.0010, Sum P(2) = 0.0010
 Identities = 7/21 (33%), Positives = 12/21 (57%)

Query:    46 NAYILFYKKRDEDSDVEVSGP 66
             NAY+L Y+ +  +  + V  P
Sbjct:   410 NAYMLVYRLQTREKSLTVEVP 430


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.315   0.133   0.415    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0       66        66   0.00091  102 3  11 23  0.50    28
                                                     29  0.48    28


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  100
  No. of states in DFA:  547 (58 KB)
  Total size of DFA:  110 KB (2074 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  9.60u 0.07s 9.67t   Elapsed:  00:00:01
  Total cpu time:  9.61u 0.07s 9.68t   Elapsed:  00:00:01
  Start:  Thu Aug 15 17:03:52 2013   End:  Thu Aug 15 17:03:53 2013

Back to top