BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7178
(154 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|F6Z5C0|UBP15_XENTR Ubiquitin carboxyl-terminal hydrolase 15 OS=Xenopus tropicalis
GN=usp15 PE=2 SV=2
Length = 982
Score = 83.2 bits (204), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 54/94 (57%), Gaps = 3/94 (3%)
Query: 63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFAL 119
Q G+CGL NLGNTCFM++ IQ L L EYF N +D L + + +A
Sbjct: 284 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAE 343
Query: 120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+++MWSG+YS V P FK +G PQF Y+Q
Sbjct: 344 LIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 377
>sp|Q9Y4E8|UBP15_HUMAN Ubiquitin carboxyl-terminal hydrolase 15 OS=Homo sapiens GN=USP15
PE=1 SV=3
Length = 981
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDE 116
N Q G+CGL NLGNTCFM++ IQ L L EYF N ++ L + +
Sbjct: 282 NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 341
Query: 117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+A L+++MWSG++S V P FK +G PQF Y+Q
Sbjct: 342 YAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 378
>sp|Q9R085|UBP15_RAT Ubiquitin carboxyl-terminal hydrolase 15 OS=Rattus norvegicus
GN=Usp15 PE=1 SV=1
Length = 952
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDE 116
N Q G+CGL NLGNTCFM++ IQ L L EYF N ++ L + +
Sbjct: 253 NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 312
Query: 117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+A L+++MWSG++S V P FK +G PQF Y+Q
Sbjct: 313 YAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 349
>sp|Q8R5H1|UBP15_MOUSE Ubiquitin carboxyl-terminal hydrolase 15 OS=Mus musculus GN=Usp15
PE=2 SV=1
Length = 981
Score = 80.5 bits (197), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDE 116
N Q G+CGL NLGNTCFM++ IQ L L EYF N ++ L + +
Sbjct: 282 NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 341
Query: 117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+A L+++MWSG++S V P FK +G PQF Y+Q
Sbjct: 342 YAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 378
>sp|Q2HJE4|UBP15_BOVIN Ubiquitin carboxyl-terminal hydrolase 15 OS=Bos taurus GN=USP15
PE=2 SV=1
Length = 952
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 54/97 (55%), Gaps = 3/97 (3%)
Query: 60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDE 116
N Q G+CGL NLGNTCFM++ Q L L EYF N ++ L + +
Sbjct: 253 NNEQPGLCGLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 312
Query: 117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+A L+++MWSG+YS V P FK +G PQF Y+Q
Sbjct: 313 YAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 349
>sp|Q4R6D3|UBP50_MACFA Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Macaca
fascicularis GN=USP50 PE=2 SV=1
Length = 373
Score = 73.9 bits (180), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/101 (42%), Positives = 57/101 (56%), Gaps = 3/101 (2%)
Query: 53 EDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSS 112
++ D S C+Q GV GLRNLGNTC+M+A +Q L + S LVEYF + +L++ CS
Sbjct: 31 KEADGSQPCSQ-GVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQND--CSE 87
Query: 113 LVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ FA L+ MW G V P F+ LG YP F Q
Sbjct: 88 VATAFAYLMTDMWLGDSDCVSPEIFRSALGNLYPAFTKKTQ 128
>sp|P35123|UBP4_MOUSE Ubiquitin carboxyl-terminal hydrolase 4 OS=Mus musculus GN=Usp4
PE=1 SV=3
Length = 962
Score = 72.4 bits (176), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFAL 119
Q G+CGL NLGNTCFM++ +Q L + L EYF E + + + + +A
Sbjct: 298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357
Query: 120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+++MWSG+ + V P FK +G PQF Y+Q
Sbjct: 358 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQ 391
>sp|B2GUZ1|UBP4_RAT Ubiquitin carboxyl-terminal hydrolase 4 OS=Rattus norvegicus
GN=Usp4 PE=1 SV=1
Length = 961
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 3/94 (3%)
Query: 63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFAL 119
Q G+CGL NLGNTCFM++ +Q L L EYF E + + + + +A
Sbjct: 298 QPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357
Query: 120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+++MWSG+ + V P FK +G PQF Y+Q
Sbjct: 358 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQ 391
>sp|A6QR55|UBP4_BOVIN Ubiquitin carboxyl-terminal hydrolase 4 OS=Bos taurus GN=USP4 PE=2
SV=1
Length = 963
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 53/95 (55%), Gaps = 3/95 (3%)
Query: 62 AQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFA 118
Q G+CGL NLGNTCFM++ +Q L + L +YF E + + + + +A
Sbjct: 297 VQPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYA 356
Query: 119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+++MWSG+ + V P FK +G PQF Y+Q
Sbjct: 357 ELIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391
>sp|Q13107|UBP4_HUMAN Ubiquitin carboxyl-terminal hydrolase 4 OS=Homo sapiens GN=USP4
PE=1 SV=3
Length = 963
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFAL 119
Q G+CGL NLGNTCFM++ +Q L + L +YF E + + + + +A
Sbjct: 298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357
Query: 120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+++MWSG+ + V P FK +G PQF Y+Q
Sbjct: 358 LIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391
>sp|Q5RCD3|UBP4_PONAB Ubiquitin carboxyl-terminal hydrolase 4 OS=Pongo abelii GN=USP4
PE=2 SV=1
Length = 963
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 53/94 (56%), Gaps = 3/94 (3%)
Query: 63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFAL 119
Q G+CGL NLGNTCFM++ +Q L + L +YF E + + + + +A
Sbjct: 298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357
Query: 120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+++MWSG+ + V P FK +G PQF Y+Q
Sbjct: 358 LIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391
>sp|Q6P8X6|UBP50_MOUSE Putative ubiquitin carboxyl-terminal hydrolase 50 OS=Mus musculus
GN=Usp50 PE=2 SV=1
Length = 390
Score = 70.9 bits (172), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 2/85 (2%)
Query: 64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRK 123
+GV GLRNLGNTC+M+A +Q L + S LVEYF + +LK CS + FA L+
Sbjct: 42 QGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFLSGKYITALKKD--CSEVTTAFAYLMTD 99
Query: 124 MWSGQYSIVHPSDFKQILGVHYPQF 148
MW G V P F +G YP F
Sbjct: 100 MWLGDSDCVSPEIFLSAVGSLYPAF 124
>sp|P40818|UBP8_HUMAN Ubiquitin carboxyl-terminal hydrolase 8 OS=Homo sapiens GN=USP8
PE=1 SV=1
Length = 1118
Score = 70.1 bits (170), Expect = 5e-12, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 3/92 (3%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFALLV 121
+ GLRNLGNTC+M++ +Q L A L +YF +D + S+ + +EF +++
Sbjct: 775 ALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIM 834
Query: 122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ +W+GQY + P DFK +G QF Y Q
Sbjct: 835 KALWTGQYRYISPKDFKITIGKINDQFAGYSQ 866
>sp|Q2KHV7|UBP2_BOVIN Ubiquitin carboxyl-terminal hydrolase 2 OS=Bos taurus GN=USP2 PE=2
SV=1
Length = 606
Score = 69.3 bits (168), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 78/157 (49%), Gaps = 15/157 (9%)
Query: 11 ECFSTASAASSFPIPLPPPTSSDVCEGPENFTGELSSLFEI------------SEDNDVS 58
E + ++A P P PP + +V +G S L+E S D
Sbjct: 201 ENYGRKASAPQVPTPTPPSRAPEVLSPTYRPSGRYS-LWEKGKGQALVSSRSSSPGRDTM 259
Query: 59 DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSE-EDSLKSSSACSSLVDEF 117
++ + +G+ GLRNLGNTCFM++ +Q L L +Y + D SS A ++L++EF
Sbjct: 260 NSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEF 319
Query: 118 ALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
A L++ +W S +V PS+FK + + P+F Y Q
Sbjct: 320 AKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 356
>sp|Q93Y01|UBP9_ARATH Ubiquitin carboxyl-terminal hydrolase 9 OS=Arabidopsis thaliana
GN=UBP9 PE=2 SV=1
Length = 910
Score = 68.9 bits (167), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 71/144 (49%), Gaps = 14/144 (9%)
Query: 24 IPLPPPTSS-DVCEGPENFTGELS----SLF-EISEDNDVSDNCA------QRGVCGLRN 71
+PL P SS + GP G + SLF I+ ++D S++ + + G+ GL N
Sbjct: 248 VPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFPRITSEDDGSNSLSILGKGEKGGLAGLSN 307
Query: 72 LGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSS--SACSSLVDEFALLVRKMWSGQY 129
LGNTCFM++ +Q L +VEYF +D + + C L F L++K+WS
Sbjct: 308 LGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGR 367
Query: 130 SIVHPSDFKQILGVHYPQFKDYRQ 153
+ V P FK L PQF Y Q
Sbjct: 368 NSVAPRAFKTKLARFAPQFSGYNQ 391
>sp|Q99K46|UBP11_MOUSE Ubiquitin carboxyl-terminal hydrolase 11 OS=Mus musculus GN=Usp11
PE=2 SV=4
Length = 921
Score = 68.6 bits (166), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 53 EDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC-- 110
ED D Q G+CGL NLGNTCFM++ +Q L L EYF N + L +
Sbjct: 246 EDEDFQ---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGM 302
Query: 111 -SSLVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L + +A LV++ WSG + + P+ FK +G QF Y+Q
Sbjct: 303 KGELAEAYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQ 346
>sp|Q9ZSB5|UBP10_ARATH Ubiquitin carboxyl-terminal hydrolase 10 OS=Arabidopsis thaliana
GN=UBP10 PE=2 SV=2
Length = 923
Score = 68.2 bits (165), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 69/144 (47%), Gaps = 14/144 (9%)
Query: 24 IPLPPPTS-SDVCEGPENFTGELS----SLF-EISEDNDVSDNCA------QRGVCGLRN 71
+PL P S + GP G + SLF I+ ++D D+ + + G+ GL N
Sbjct: 249 VPLEPSRSIVTIAGGPTLSNGHSTTSNFSLFPRITSEDDGRDSLSILGKGEKGGLAGLSN 308
Query: 72 LGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSS--SACSSLVDEFALLVRKMWSGQY 129
LGNTCFM++ +Q L +VEYF +D + + C L F L++K+WS
Sbjct: 309 LGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGELAIAFGDLLKKLWSSGR 368
Query: 130 SIVHPSDFKQILGVHYPQFKDYRQ 153
+ V P FK L PQF Y Q
Sbjct: 369 NAVAPRAFKTKLARFAPQFSGYNQ 392
>sp|Q9MAQ3|UBP11_ARATH Putative ubiquitin carboxyl-terminal hydrolase 11 OS=Arabidopsis
thaliana GN=UBP11 PE=3 SV=2
Length = 892
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 24 IPLPPPTSS--DVCEGPENFTGELSSLFEISE------DNDVSDNC----AQRGVCGLRN 71
+PL P S D+ G + S+ F+ S +DVS +RG+ GL+N
Sbjct: 246 VPLEPMRSDAMDIVRGGGTLSNGHSNGFKFSFFGRNTFKDDVSSRTFGKGEKRGLGGLQN 305
Query: 72 LGNTCFMSAGIQSLVAASALVEYFTN--KSEEDSLKSSSACSSLVDEFALLVRKMWSGQY 129
LGNTCFM++ +Q L +VEYF +S+ ++ L F L+RK+WS
Sbjct: 306 LGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLWSSGQ 365
Query: 130 SIVHPSDFKQILGVHYPQFKDYRQ 153
+ V P FK L PQF Y Q
Sbjct: 366 NTVAPRAFKTKLARFAPQFSGYNQ 389
>sp|P51784|UBP11_HUMAN Ubiquitin carboxyl-terminal hydrolase 11 OS=Homo sapiens GN=USP11
PE=1 SV=3
Length = 963
Score = 67.4 bits (163), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/104 (38%), Positives = 55/104 (52%), Gaps = 6/104 (5%)
Query: 53 EDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKS--EEDSLKSSSAC 110
ED D Q G+CGL NLGNTCFM++ +Q L L EYF N EE + ++
Sbjct: 298 EDEDFK---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPLGM 354
Query: 111 SSLVDE-FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ E +A LV++ WSG + + P FK +G QF Y+Q
Sbjct: 355 KGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQ 398
>sp|Q80U87|UBP8_MOUSE Ubiquitin carboxyl-terminal hydrolase 8 OS=Mus musculus GN=Usp8
PE=1 SV=2
Length = 1080
Score = 66.6 bits (161), Expect = 5e-11, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 3/92 (3%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFALLV 121
+ GLRNLGNTC+M++ +Q L A L +YF +D + S+ + +EF +++
Sbjct: 737 ALTGLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIM 796
Query: 122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ +W+GQY + P DFK +G QF Q
Sbjct: 797 KALWTGQYRYISPKDFKVTIGKINDQFAGSSQ 828
>sp|O88623|UBP2_MOUSE Ubiquitin carboxyl-terminal hydrolase 2 OS=Mus musculus GN=Usp2
PE=1 SV=2
Length = 613
Score = 66.2 bits (160), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 60/100 (60%), Gaps = 2/100 (2%)
Query: 56 DVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNK-SEEDSLKSSSACSSLV 114
D ++ + +G+ GLRNLGNTCFM++ +Q L L +Y + D +SSA ++L+
Sbjct: 264 DTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAHTALM 323
Query: 115 DEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+EFA L++ +W S +V PS+FK + + P+F Y Q
Sbjct: 324 EEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQ 363
>sp|Q5U349|UBP2_RAT Ubiquitin carboxyl-terminal hydrolase 2 OS=Rattus norvegicus
GN=Usp2 PE=1 SV=1
Length = 618
Score = 66.2 bits (160), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 61/104 (58%), Gaps = 2/104 (1%)
Query: 52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNK-SEEDSLKSSSAC 110
S D ++ + +G+ GLRNLGNTCFM++ +Q L L +Y + D +SSA
Sbjct: 265 SPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAH 324
Query: 111 SSLVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
++L++EFA L++ +W S +V PS+FK + + P+F Y Q
Sbjct: 325 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 368
>sp|O75604|UBP2_HUMAN Ubiquitin carboxyl-terminal hydrolase 2 OS=Homo sapiens GN=USP2
PE=1 SV=2
Length = 605
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNK-SEEDSLKSSSAC 110
S D ++ + +G+ GLRNLGNTCFM++ +Q L L +Y + D S+A
Sbjct: 252 SPGRDGMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAH 311
Query: 111 SSLVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
++LV+EFA L++ +W S +V PS+FK + + P+F Y Q
Sbjct: 312 TALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 355
>sp|O94966|UBP19_HUMAN Ubiquitin carboxyl-terminal hydrolase 19 OS=Homo sapiens GN=USP19
PE=1 SV=2
Length = 1318
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSS---LVDEFALLV 121
G GL NLGNTCFM++ IQSL L ++F ++S E + ++ + L FA+L+
Sbjct: 495 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 554
Query: 122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
R +W G + PS K I+ QF Y Q
Sbjct: 555 RALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 586
>sp|Q6J1Y9|UBP19_RAT Ubiquitin carboxyl-terminal hydrolase 19 OS=Rattus norvegicus
GN=Usp19 PE=1 SV=1
Length = 1357
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSS---LVDEFALLV 121
G GL NLGNTCFM++ IQSL L ++F ++S E + ++ + L FA+L+
Sbjct: 534 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 593
Query: 122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
R +W G + PS K I+ QF Y Q
Sbjct: 594 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQ 625
>sp|Q3UJD6|UBP19_MOUSE Ubiquitin carboxyl-terminal hydrolase 19 OS=Mus musculus GN=Usp19
PE=2 SV=1
Length = 1360
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 49/92 (53%), Gaps = 3/92 (3%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSS---LVDEFALLV 121
G GL NLGNTCFM++ IQSL L ++F ++S E + ++ + L FA+L+
Sbjct: 537 GFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPLGTGGRLAIGFAVLL 596
Query: 122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
R +W G + PS K I+ QF Y Q
Sbjct: 597 RALWKGTHQAFQPSKLKAIVASKASQFTGYAQ 628
>sp|O57429|UBP2_CHICK Ubiquitin carboxyl-terminal hydrolase 2 OS=Gallus gallus GN=USP2
PE=2 SV=1
Length = 357
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 53/92 (57%), Gaps = 2/92 (2%)
Query: 64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNKSEEDSLKSSSACSSLVDEFALLVR 122
+G+ GLRNLGNTCFM++ +Q L L +Y N+ D +S ++L+ EFA L++
Sbjct: 16 QGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQ 75
Query: 123 KMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+W S V PS+FK + + P+F Y Q
Sbjct: 76 LLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQ 107
>sp|O22207|UBP5_ARATH Ubiquitin carboxyl-terminal hydrolase 5 OS=Arabidopsis thaliana
GN=UBP5 PE=1 SV=2
Length = 924
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 49/95 (51%), Gaps = 10/95 (10%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSL--VDEFAL--- 119
G+ GL NLGNTCFM++ IQ LV YF +ED + + + L V E AL
Sbjct: 315 GLTGLLNLGNTCFMNSAIQCLVHTPEFASYF----QEDYHQEINWQNPLGMVGELALAFG 370
Query: 120 -LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L+RK+W+ + + P FK L PQF Y Q
Sbjct: 371 DLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQ 405
>sp|Q70EL3|UBP50_HUMAN Inactive ubiquitin carboxyl-terminal hydrolase 50 OS=Homo sapiens
GN=USP50 PE=2 SV=1
Length = 339
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 45/93 (48%), Gaps = 3/93 (3%)
Query: 64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKS---SSACSSLVDEFALL 120
+GV GL NLGNTC ++A Q L + LVEYF +L+ S CS + FA L
Sbjct: 41 QGVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQKFLLPSDCSEVATAFAYL 100
Query: 121 VRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ MW G V P F LG YP F Q
Sbjct: 101 MTDMWLGDSDCVSPEIFWSALGNLYPAFTKKMQ 133
>sp|Q70CQ4|UBP31_HUMAN Ubiquitin carboxyl-terminal hydrolase 31 OS=Homo sapiens GN=USP31
PE=2 SV=2
Length = 1352
Score = 57.8 bits (138), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYF------------TNKSEEDSLKSSSACSS 112
GV GLRN GNTCFM+A +Q L EY + E+ + + +
Sbjct: 126 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 185
Query: 113 LVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ ++ A LVR +W+ +Y+ H DFK I+ + Q++ Q
Sbjct: 186 VTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQ 226
>sp|O60079|UBP12_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 12
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp12 PE=1 SV=1
Length = 979
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 57/114 (50%), Gaps = 9/114 (7%)
Query: 49 FEISEDNDVSDNCAQR------GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEED 102
F I + N+ S N Q+ G CGL NLGNTC+M++ +Q L L ++FT+ ++
Sbjct: 287 FLIQQRNNQSSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKN 346
Query: 103 SLKSSSAC---SSLVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ S+ + FA L++ ++S ++S P FK +G F Y Q
Sbjct: 347 QVNESNPLGMGGQVASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQ 400
>sp|Q9C585|UBP8_ARATH Ubiquitin carboxyl-terminal hydrolase 8 OS=Arabidopsis thaliana
GN=UBP8 PE=1 SV=2
Length = 871
Score = 57.4 bits (137), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/91 (36%), Positives = 49/91 (53%), Gaps = 2/91 (2%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNK-SEEDSLKSSSACSS-LVDEFALLVR 122
G+ GL+NLGNTCFM++ +Q L LV++F + S+E +L + + F L+R
Sbjct: 277 GLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLR 336
Query: 123 KMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+W+ S V P FK L PQF + Q
Sbjct: 337 SLWAPGASTVAPRTFKAKLARFAPQFSGFNQ 367
>sp|P35125|UBP6_HUMAN Ubiquitin carboxyl-terminal hydrolase 6 OS=Homo sapiens GN=USP6
PE=1 SV=2
Length = 1406
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 48/95 (50%), Gaps = 3/95 (3%)
Query: 62 AQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFA 118
++G GL NLGNTCFM++ IQ + L +YF + L ++ + +
Sbjct: 527 TEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYG 586
Query: 119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
LV+++WSG V P ++ + + P+F ++Q
Sbjct: 587 DLVQELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQ 621
>sp|Q8NFA0|UBP32_HUMAN Ubiquitin carboxyl-terminal hydrolase 32 OS=Homo sapiens GN=USP32
PE=1 SV=1
Length = 1604
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 3/95 (3%)
Query: 62 AQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFA 118
++G GL NLGNTCFM++ IQ + L +YF + L ++ + +
Sbjct: 729 TEKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYG 788
Query: 119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
LV+++WSG V P + + + P+F ++Q
Sbjct: 789 DLVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 823
>sp|Q8CEG8|UBP27_MOUSE Ubiquitin carboxyl-terminal hydrolase 27 OS=Mus musculus GN=Usp27
PE=2 SV=2
Length = 438
Score = 53.5 bits (127), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G+ GL NLGNTCFM+ +Q+L L ++F + + S C LV E + L R++
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC--LVCEMSSLFREL 133
Query: 125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+SG S P ++ +H YRQ
Sbjct: 134 YSGNPSPHVPYKLLHLVWIHARHLAGYRQ 162
>sp|A6NNY8|UBP27_HUMAN Ubiquitin carboxyl-terminal hydrolase 27 OS=Homo sapiens GN=USP27X
PE=2 SV=3
Length = 438
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G+ GL NLGNTCFM+ +Q+L L ++F + + S C LV E + L R++
Sbjct: 76 GLRGLINLGNTCFMNCIVQALTHTPILRDFFLSDRHRCEMPSPELC--LVCEMSSLFREL 133
Query: 125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+SG S P ++ +H YRQ
Sbjct: 134 YSGNPSPHVPYKLLHLVWIHARHLAGYRQ 162
>sp|Q5DU02|UBP22_MOUSE Ubiquitin carboxyl-terminal hydrolase 22 OS=Mus musculus GN=Usp22
PE=2 SV=2
Length = 525
Score = 53.1 bits (126), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 44 ELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDS 103
EL L + ++ NC G+ GL NLGNTCFM+ +Q+L L ++F +
Sbjct: 154 ELELLKHNPKRRKITSNCTI-GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCE 212
Query: 104 LKSSSACSSLVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
++S S+C LV E + L ++ +SG S P ++ H Y Q
Sbjct: 213 MQSPSSC--LVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQ 260
>sp|Q9UPT9|UBP22_HUMAN Ubiquitin carboxyl-terminal hydrolase 22 OS=Homo sapiens GN=USP22
PE=1 SV=2
Length = 525
Score = 53.1 bits (126), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 44 ELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDS 103
EL L + ++ NC G+ GL NLGNTCFM+ +Q+L L ++F +
Sbjct: 154 ELELLKHNPKRRKITSNCTI-GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCE 212
Query: 104 LKSSSACSSLVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
++S S+C LV E + L ++ +SG S P ++ H Y Q
Sbjct: 213 MQSPSSC--LVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQ 260
>sp|P0C8Z3|UBP22_BOVIN Ubiquitin carboxyl-terminal hydrolase 22 OS=Bos taurus GN=USP22
PE=2 SV=1
Length = 514
Score = 52.8 bits (125), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 53/110 (48%), Gaps = 3/110 (2%)
Query: 44 ELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDS 103
EL L + ++ NC G+ GL NLGNTCFM+ +Q+L L ++F +
Sbjct: 143 ELELLKHNPKRRKITSNCTI-GLRGLINLGNTCFMNCIVQALTHTPLLRDFFLSDRHRCE 201
Query: 104 LKSSSACSSLVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
++S S+C LV E + L ++ +SG S P ++ H Y Q
Sbjct: 202 MQSPSSC--LVCEMSSLFQEFYSGHRSPHIPYKLLHLVWTHARHLAGYEQ 249
>sp|Q70EK9|UBP51_HUMAN Ubiquitin carboxyl-terminal hydrolase 51 OS=Homo sapiens GN=USP51
PE=2 SV=1
Length = 711
Score = 52.8 bits (125), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 45/89 (50%), Gaps = 2/89 (2%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G+ GL NLGNTCFM+ +Q+L L ++F + + + S S C LV E + L M
Sbjct: 361 GLRGLINLGNTCFMNCIVQALTHIPLLKDFFLSDKHKCIMTSPSLC--LVCEMSSLFHAM 418
Query: 125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+SG + P ++ +H YRQ
Sbjct: 419 YSGSRTPHIPYKLLHLIWIHAEHLAGYRQ 447
>sp|Q9USM5|UBP1_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 1
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp1 PE=3 SV=1
Length = 849
Score = 52.4 bits (124), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC 110
I+++ +++ N + G+CGL NLGN+C+M++ +Q ++ L +YF + S E + ++
Sbjct: 264 ITKEQNLTIN-KEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPL 322
Query: 111 SSL----VDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+ + +LL + V PS FK I+G F YRQ
Sbjct: 323 GMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQ 369
>sp|P39538|UBP12_YEAST Ubiquitin carboxyl-terminal hydrolase 12 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=UBP12 PE=1
SV=1
Length = 1254
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 47/98 (47%), Gaps = 9/98 (9%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSAC---SSLVDEFALLV 121
G GL NLGNTC+M++ +Q LV L +YF ED + + + F+ LV
Sbjct: 362 GTTGLVNLGNTCYMNSALQCLVHIPQLRDYFLYDGYEDEINEENPLGYHGYVARAFSDLV 421
Query: 122 RKMWSGQYSIVH------PSDFKQILGVHYPQFKDYRQ 153
+K++ + SI+ PS FK +G F Y Q
Sbjct: 422 QKLFQNRMSIMQRNAAFPPSMFKSTIGHFNSMFSGYMQ 459
>sp|A7Z056|UBP20_BOVIN Ubiquitin carboxyl-terminal hydrolase 20 OS=Bos taurus GN=USP20
PE=2 SV=1
Length = 912
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 68/153 (44%), Gaps = 18/153 (11%)
Query: 9 QDECFSTASAASSFPIPLP-------PPTSSDVCEGPENFTGELSSLFEISEDNDVSDNC 61
+ E F A+ P P P PP S + P E S SED+D+
Sbjct: 87 EKEVFLEPRLAAHPPGPAPKFSEQDSPPPSHPLKAVPIAVADEGESE---SEDDDLKP-- 141
Query: 62 AQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLV 121
RG+ G++NLGN+C+M+A +Q+L L ++F E L + +L + LV
Sbjct: 142 --RGLTGMKNLGNSCYMNAALQALSNCPPLTQFFL---ECGGLVRTDKKPALCKSYQKLV 196
Query: 122 RKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
++W + S V P+ + + P F+ Y Q
Sbjct: 197 SEVWHRKRPSYVVPTSLSHGIKLVNPMFRGYAQ 229
>sp|B1WBD7|UBP20_XENLA Ubiquitin carboxyl-terminal hydrolase 20 OS=Xenopus laevis GN=usp20
PE=2 SV=1
Length = 840
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/166 (25%), Positives = 68/166 (40%), Gaps = 28/166 (16%)
Query: 1 MGIENTWS--QDECFSTASA----------ASSFPIPLPPPTSSDVCEGPENFTGELSSL 48
+G N W+ QD C S A FP P P S + G +
Sbjct: 35 VGGPNLWACLQDGCQSVGCGESYADHSTLHAQDFPSPAHPLKSVPIAVGDDG-------- 86
Query: 49 FEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSS 108
E D+ RG+ G++N+GN+C+M+A +Q+L L ++F E L +
Sbjct: 87 ----ESESDEDDIKPRGLTGMKNIGNSCYMNAALQALSNCPPLTQFFL---ECGGLVRTD 139
Query: 109 ACSSLVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
+L + LV ++W + S V PS + + P F+ Y Q
Sbjct: 140 KKPALCKSYQKLVSELWHKKRPSYVVPSSLYHGIKLINPLFRGYSQ 185
>sp|A5PMR2|UBP33_DANRE Ubiquitin carboxyl-terminal hydrolase 33 OS=Danio rerio GN=usp33
PE=2 SV=1
Length = 897
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 52/105 (49%), Gaps = 4/105 (3%)
Query: 50 EISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSA 109
++ + + D RG+ GL+N+GNTC+M+A +Q+L L ++F E L +
Sbjct: 139 DLDMETEEEDELRTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFL---ECGGLVKTDK 195
Query: 110 CSSLVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
+L + L+ +W + + V P++ Q + P F+ Y Q
Sbjct: 196 KPALCKSYQKLITDLWHKNRNAYVVPTNLFQGIKAVNPMFRGYSQ 240
>sp|B2GUX4|UBP21_RAT Ubiquitin carboxyl-terminal hydrolase 21 OS=Rattus norvegicus
GN=Usp21 PE=2 SV=1
Length = 565
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G GLRNLGNTCF++A +Q L + L ++ + + L + FA ++ +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 125 WSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
W V+P+ F+ + + P F Y Q
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299
>sp|Q2KJ72|UBP21_BOVIN Ubiquitin carboxyl-terminal hydrolase 21 OS=Bos taurus GN=USP21
PE=2 SV=1
Length = 565
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G GLRNLGNTCF++A +Q L + L ++ + + L + FA ++ +
Sbjct: 210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 125 WSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
W V+P+ F+ + + P F Y Q
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299
>sp|Q9UK80|UBP21_HUMAN Ubiquitin carboxyl-terminal hydrolase 21 OS=Homo sapiens GN=USP21
PE=1 SV=1
Length = 565
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G GLRNLGNTCF++A +Q L + L ++ + + L + FA ++ +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 125 WSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
W V+P+ F+ + + P F Y Q
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299
>sp|Q9QZL6|UBP21_MOUSE Ubiquitin carboxyl-terminal hydrolase 21 OS=Mus musculus GN=Usp21
PE=1 SV=1
Length = 566
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 43/90 (47%), Gaps = 1/90 (1%)
Query: 65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALLVRKM 124
G GLRNLGNTCF++A +Q L + L ++ + + L + FA ++ +
Sbjct: 210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269
Query: 125 WSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
W V+P+ F+ + + P F Y Q
Sbjct: 270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299
>sp|Q8R5K2|UBP33_MOUSE Ubiquitin carboxyl-terminal hydrolase 33 OS=Mus musculus GN=Usp33
PE=1 SV=2
Length = 909
Score = 50.8 bits (120), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 56/113 (49%), Gaps = 8/113 (7%)
Query: 46 SSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEE 101
+ + +SED D+ D RG+ GL+N+GNTC+M+A +Q+L L ++F +
Sbjct: 129 TPMVAVSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCG-- 186
Query: 102 DSLKSSSACSSLVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
L + ++ + L+ ++W + V P++ Q + P F+ Y Q
Sbjct: 187 -GLARTDKKPAICKSYLKLMTELWHKSRPGSVVPANLFQGIKTVNPTFRGYSQ 238
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.130 0.388
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 56,127,254
Number of Sequences: 539616
Number of extensions: 1997780
Number of successful extensions: 6488
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 37
Number of HSP's that attempted gapping in prelim test: 6211
Number of HSP's gapped (non-prelim): 251
length of query: 154
length of database: 191,569,459
effective HSP length: 107
effective length of query: 47
effective length of database: 133,830,547
effective search space: 6290035709
effective search space used: 6290035709
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 56 (26.2 bits)