BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>psy7178
MGIENTWSQDECFSTASAASSFPIPLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDN
CAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNKSEEDSLKSSSACSSLVDEFALL
VRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQV

High Scoring Gene Products

Symbol, full name Information P value
I3LRX7
Uncharacterized protein
protein from Sus scrofa 1.2e-12
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 1.4e-12
usp4
ubiquitin specific protease 4 (proto-oncogene)
gene_product from Danio rerio 1.7e-12
USP15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Homo sapiens 2.9e-12
Usp15
ubiquitin specific peptidase 15
protein from Mus musculus 3.7e-12
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.7e-12
LOC100737425
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 3.7e-12
usp15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Xenopus (Silurana) tropicalis 4.7e-12
USP15
Ubiquitin carboxyl-terminal hydrolase 15
protein from Bos taurus 7.4e-12
Usp15
ubiquitin specific peptidase 15
gene from Rattus norvegicus 7.4e-12
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 7.4e-12
USP15
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 7.4e-12
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.5e-11
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 4.4e-11
USP11
Ubiquitin carboxyl-terminal hydrolase 11
protein from Homo sapiens 9.4e-11
USP50
Uncharacterized protein
protein from Canis lupus familiaris 2.8e-10
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 3.5e-10
USP8
Ubiquitin carboxyl-terminal hydrolase 8
protein from Homo sapiens 4.4e-10
Usp50
ubiquitin specific peptidase 50
protein from Mus musculus 5.2e-10
Ubpy
UBPY ortholog
protein from Drosophila melanogaster 5.4e-10
USP50
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 6.2e-10
Usp4
ubiquitin specific peptidase 4 (proto-oncogene)
protein from Mus musculus 6.2e-10
USP4
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 7.2e-10
Usp4
ubiquitin specific peptidase 4 (proto-oncogene)
gene from Rattus norvegicus 8.0e-10
Usp8
ubiquitin specific peptidase 8
gene from Rattus norvegicus 9.9e-10
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Bos taurus 1.0e-09
LOC100512072
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.0e-09
Usp11
ubiquitin specific peptidase 11
protein from Mus musculus 1.2e-09
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Homo sapiens 1.3e-09
USP4
Ubiquitin carboxyl-terminal hydrolase 4
protein from Pongo abelii 1.3e-09
LOC100156336
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.3e-09
DDB_G0284381
putative ubiquitin carboxyl-terminal hydrolase (UCH)
gene from Dictyostelium discoideum 1.5e-09
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 2.0e-09
USP11
Ubiquitin carboxyl-terminal hydrolase 11
protein from Homo sapiens 2.1e-09
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Bos taurus 2.4e-09
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 2.5e-09
H34C03.2 gene from Caenorhabditis elegans 2.5e-09
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 2.7e-09
usp2a
ubiquitin specific peptidase 2a
gene_product from Danio rerio 4.9e-09
F1RYL9
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 5.2e-09
UBP10
AT4G10590
protein from Arabidopsis thaliana 5.3e-09
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 5.4e-09
Usp11
ubiquitin specific peptidase 11
gene from Rattus norvegicus 6.1e-09
Gga.30068
Uncharacterized protein
protein from Gallus gallus 6.5e-09
LOC100520041
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 6.7e-09
LOC100520041
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 8.2e-09
Usp2
ubiquitin specific peptidase 2
protein from Mus musculus 8.3e-09
USP2
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.0e-08
Usp2
ubiquitin specific peptidase 2
gene from Rattus norvegicus 1.1e-08
UBP11
AT1G32850
protein from Arabidopsis thaliana 1.1e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.1e-08
usp11
ubiquitin specific peptidase 11
gene_product from Danio rerio 1.2e-08
USP8
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 1.4e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.4e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 1.4e-08
UBP9
AT4G10570
protein from Arabidopsis thaliana 1.4e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.5e-08
USP2
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 1.5e-08
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Homo sapiens 1.7e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 1.8e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 1.9e-08
USP11
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 2.3e-08
CG14619 protein from Drosophila melanogaster 3.1e-08
Usp8
ubiquitin specific peptidase 8
protein from Mus musculus 3.7e-08
usp8
ubiquitin specific peptidase 8
gene_product from Danio rerio 4.0e-08
USP2
Ubiquitin carboxyl-terminal hydrolase 2
protein from Gallus gallus 5.2e-08
DDB_G0293770
putative ubiquitin carboxyl-terminal hydrolase (UCH)
gene from Dictyostelium discoideum 6.0e-08
F07A11.4 gene from Caenorhabditis elegans 2.1e-07
USP19
Ubiquitin carboxyl-terminal hydrolase 19
protein from Homo sapiens 3.2e-07
USP31
Ubiquitin carboxyl-terminal hydrolase 31
protein from Homo sapiens 5.7e-07
UBP5
AT2G40930
protein from Arabidopsis thaliana 7.4e-07
cyk-3 gene from Caenorhabditis elegans 7.7e-07
Usp19
ubiquitin specific peptidase 19
gene from Rattus norvegicus 9.1e-07
Usp19
ubiquitin specific peptidase 19
protein from Mus musculus 9.1e-07
USP50
Inactive ubiquitin carboxyl-terminal hydrolase 50
protein from Homo sapiens 1.2e-06
usp19
ubiquitin specific peptidase 19
gene_product from Danio rerio 2.1e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 2.4e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.0e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 3.0e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.0e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Homo sapiens 3.1e-06
LAMC1
Ubiquitin carboxyl-terminal hydrolase
protein from Sus scrofa 3.3e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Bos taurus 3.3e-06
USP19
Ubiquitin carboxyl-terminal hydrolase
protein from Canis lupus familiaris 3.3e-06
USP11
Uncharacterized protein
protein from Sus scrofa 3.4e-06
UBP8
AT5G22030
protein from Arabidopsis thaliana 3.8e-06
USP50
Inactive ubiquitin carboxyl-terminal hydrolase 50
protein from Homo sapiens 4.3e-06
E01B7.1 gene from Caenorhabditis elegans 5.8e-06
USP32
Ubiquitin carboxyl-terminal hydrolase
protein from Gallus gallus 1.1e-05
Usp43
ubiquitin specific peptidase 43
gene from Rattus norvegicus 1.4e-05

The BLAST search returned 9 gene products which did not match your query constraints. Please see the full BLAST report below for the details.

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  psy7178
        (154 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|I3LRX7 - symbol:I3LRX7 "Uncharacterized protein...   176  1.2e-12   1
UNIPROTKB|E1C718 - symbol:USP15 "Ubiquitin carboxyl-termi...   180  1.4e-12   1
ZFIN|ZDB-GENE-041008-187 - symbol:usp4 "ubiquitin specifi...   160  1.7e-12   2
UNIPROTKB|Q9Y4E8 - symbol:USP15 "Ubiquitin carboxyl-termi...   177  2.9e-12   1
MGI|MGI:101857 - symbol:Usp15 "ubiquitin specific peptida...   176  3.7e-12   1
UNIPROTKB|E2R988 - symbol:USP15 "Ubiquitin carboxyl-termi...   176  3.7e-12   1
UNIPROTKB|F1SKD5 - symbol:LOC100737425 "Ubiquitin carboxy...   176  3.7e-12   1
UNIPROTKB|E1C719 - symbol:USP15 "Ubiquitin carboxyl-termi...   175  4.5e-12   1
UNIPROTKB|F1NFR2 - symbol:USP15 "Ubiquitin carboxyl-termi...   175  4.5e-12   1
UNIPROTKB|F6Z5C0 - symbol:usp15 "Ubiquitin carboxyl-termi...   175  4.7e-12   1
UNIPROTKB|Q2HJE4 - symbol:USP15 "Ubiquitin carboxyl-termi...   173  7.4e-12   1
RGD|628795 - symbol:Usp15 "ubiquitin specific peptidase 1...   173  7.4e-12   1
UNIPROTKB|J9PBI4 - symbol:USP15 "Ubiquitin carboxyl-termi...   173  7.4e-12   1
UNIPROTKB|E9PCQ3 - symbol:USP15 "Ubiquitin carboxyl-termi...   173  7.4e-12   1
UNIPROTKB|E2R6J5 - symbol:USP4 "Ubiquitin carboxyl-termin...   152  3.5e-11   2
UNIPROTKB|F1NE88 - symbol:USP4 "Ubiquitin carboxyl-termin...   156  4.4e-11   2
UNIPROTKB|F1NE89 - symbol:USP4 "Ubiquitin carboxyl-termin...   156  4.5e-11   2
UNIPROTKB|Q5JXD3 - symbol:USP11 "Ubiquitin carboxyl-termi...   150  9.4e-11   1
UNIPROTKB|F1PQR0 - symbol:USP50 "Uncharacterized protein"...   151  2.8e-10   1
UNIPROTKB|B4DKA8 - symbol:USP8 "Ubiquitin carboxyl-termin...   147  3.5e-10   2
UNIPROTKB|P40818 - symbol:USP8 "Ubiquitin carboxyl-termin...   147  4.4e-10   2
MGI|MGI:1922333 - symbol:Usp50 "ubiquitin specific peptid...   150  5.2e-10   1
FB|FBgn0038862 - symbol:Ubpy "UBPY ortholog" species:7227...   139  5.4e-10   2
UNIPROTKB|E1BF60 - symbol:USP50 "Ubiquitin carboxyl-termi...   149  6.2e-10   1
MGI|MGI:98905 - symbol:Usp4 "ubiquitin specific peptidase...   155  6.2e-10   1
UNIPROTKB|H7C189 - symbol:USP4 "Ubiquitin carboxyl-termin...   152  7.2e-10   1
RGD|1587387 - symbol:Usp4 "ubiquitin specific peptidase 4...   154  8.0e-10   1
RGD|1304979 - symbol:Usp8 "ubiquitin specific peptidase 8...   148  9.9e-10   1
UNIPROTKB|A6QR55 - symbol:USP4 "Ubiquitin carboxyl-termin...   153  1.0e-09   1
UNIPROTKB|F1SPT0 - symbol:USP4 "Ubiquitin carboxyl-termin...   153  1.0e-09   1
MGI|MGI:2384312 - symbol:Usp11 "ubiquitin specific peptid...   152  1.2e-09   1
UNIPROTKB|Q13107 - symbol:USP4 "Ubiquitin carboxyl-termin...   152  1.3e-09   1
UNIPROTKB|Q5RCD3 - symbol:USP4 "Ubiquitin carboxyl-termin...   152  1.3e-09   1
UNIPROTKB|F1RYM1 - symbol:USP50 "Ubiquitin carboxyl-termi...   146  1.3e-09   1
UNIPROTKB|F1LYZ4 - symbol:F1LYZ4 "Uncharacterized protein...   146  1.4e-09   1
DICTYBASE|DDB_G0284381 - symbol:DDB_G0284381 "putative ub...   152  1.5e-09   1
UNIPROTKB|Q5D006 - symbol:Usp11 "Ubiquitin carboxyl-termi...   151  1.6e-09   1
UNIPROTKB|G5E9A6 - symbol:USP11 "Ubiquitin carboxyl-termi...   150  2.0e-09   1
UNIPROTKB|P51784 - symbol:USP11 "Ubiquitin carboxyl-termi...   150  2.1e-09   1
UNIPROTKB|Q2KHV7 - symbol:USP2 "Ubiquitin carboxyl-termin...   147  2.4e-09   1
UNIPROTKB|E1C0G5 - symbol:E1C0G5 "Ubiquitin carboxyl-term...   150  2.5e-09   1
WB|WBGene00019259 - symbol:H34C03.2 species:6239 "Caenorh...   149  2.5e-09   1
UNIPROTKB|E1BF70 - symbol:USP8 "Ubiquitin carboxyl-termin...   144  2.7e-09   1
ZFIN|ZDB-GENE-041212-59 - symbol:usp2a "ubiquitin specifi...   144  4.9e-09   1
UNIPROTKB|F1RYL9 - symbol:USP8 "Ubiquitin carboxyl-termin...   147  5.2e-09   1
TAIR|locus:2139222 - symbol:UBP10 "AT4G10590" species:370...   146  5.3e-09   1
UNIPROTKB|E2RH35 - symbol:USP8 "Ubiquitin carboxyl-termin...   147  5.4e-09   1
RGD|1303052 - symbol:Usp11 "ubiquitin specific peptidase ...   144  6.1e-09   1
UNIPROTKB|F1NES4 - symbol:LOC100858727 "Uncharacterized p...   143  6.5e-09   1
UNIPROTKB|F1SAF6 - symbol:USP2 "Ubiquitin carboxyl-termin...   140  6.7e-09   1
UNIPROTKB|I3LI16 - symbol:USP2 "Ubiquitin carboxyl-termin...   142  8.2e-09   1
MGI|MGI:1858178 - symbol:Usp2 "ubiquitin specific peptida...   142  8.3e-09   1
UNIPROTKB|E2RSX3 - symbol:USP2 "Ubiquitin carboxyl-termin...   141  1.0e-08   1
RGD|621073 - symbol:Usp2 "ubiquitin specific peptidase 2"...   141  1.1e-08   1
UNIPROTKB|Q5U349 - symbol:Usp2 "Ubiquitin carboxyl-termin...   141  1.1e-08   1
TAIR|locus:2037985 - symbol:UBP11 "AT1G32850" species:370...   143  1.1e-08   1
UNIPROTKB|K7GLG2 - symbol:USP11 "Ubiquitin carboxyl-termi...   142  1.1e-08   1
ZFIN|ZDB-GENE-081104-421 - symbol:usp11 "ubiquitin specif...   143  1.2e-08   1
UNIPROTKB|Q0IIM6 - symbol:USP8 "Ubiquitin carboxyl-termin...   143  1.4e-08   1
UNIPROTKB|J9PB02 - symbol:USP11 "Ubiquitin carboxyl-termi...   141  1.4e-08   1
UNIPROTKB|F1RWV6 - symbol:USP11 "Ubiquitin carboxyl-termi...   142  1.4e-08   1
TAIR|locus:2139202 - symbol:UBP9 "AT4G10570" species:3702...   142  1.4e-08   1
UNIPROTKB|J9P3M3 - symbol:USP11 "Ubiquitin carboxyl-termi...   141  1.5e-08   1
UNIPROTKB|E9PPM2 - symbol:USP2 "Ubiquitin carboxyl-termin...   136  1.5e-08   1
UNIPROTKB|O75604 - symbol:USP2 "Ubiquitin carboxyl-termin...   139  1.7e-08   1
UNIPROTKB|A1L506 - symbol:USP11 "Ubiquitin carboxyl-termi...   140  1.8e-08   1
UNIPROTKB|F1PWM6 - symbol:USP11 "Ubiquitin carboxyl-termi...   141  1.9e-08   1
UNIPROTKB|A5PKF9 - symbol:USP11 "Ubiquitin carboxyl-termi...   140  2.3e-08   1
FB|FBgn0031187 - symbol:CG14619 species:7227 "Drosophila ...   139  3.1e-08   1
MGI|MGI:1934029 - symbol:Usp8 "ubiquitin specific peptida...   139  3.7e-08   1
ZFIN|ZDB-GENE-030131-1949 - symbol:usp8 "ubiquitin specif...   129  4.0e-08   2
UNIPROTKB|O57429 - symbol:USP2 "Ubiquitin carboxyl-termin...   131  5.2e-08   1
DICTYBASE|DDB_G0293770 - symbol:DDB_G0293770 "putative ub...   137  6.0e-08   1
WB|WBGene00008547 - symbol:F07A11.4 species:6239 "Caenorh...   132  2.1e-07   1
UNIPROTKB|O94966 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.2e-07   2
UNIPROTKB|E7EN22 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.5e-07   2
UNIPROTKB|Q70CQ4 - symbol:USP31 "Ubiquitin carboxyl-termi...   102  5.7e-07   2
TAIR|locus:2058490 - symbol:UBP5 "ubiquitin-specific prot...   126  7.4e-07   1
WB|WBGene00000874 - symbol:cyk-3 species:6239 "Caenorhabd...   127  7.7e-07   1
RGD|1303276 - symbol:Usp19 "ubiquitin specific peptidase ...   127  9.1e-07   1
MGI|MGI:1918722 - symbol:Usp19 "ubiquitin specific peptid...   127  9.1e-07   1
UNIPROTKB|E9PP86 - symbol:USP50 "Inactive ubiquitin carbo...   118  1.2e-06   1
ZFIN|ZDB-GENE-030131-3055 - symbol:usp19 "ubiquitin speci...   124  2.1e-06   1
POMBASE|SPCC1494.05c - symbol:ubp12 "CSN-associated deubi...   122  2.1e-06   1
UNIPROTKB|E7ESU0 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  2.4e-06   1
UNIPROTKB|E2R1W4 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.0e-06   1
UNIPROTKB|E7EST9 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.0e-06   1
UNIPROTKB|J9NU38 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.0e-06   1
UNIPROTKB|B5MEG5 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.1e-06   1
UNIPROTKB|F1SKI2 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.3e-06   1
UNIPROTKB|F1MUD4 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.3e-06   1
UNIPROTKB|F1PF24 - symbol:USP19 "Ubiquitin carboxyl-termi...   122  3.3e-06   1
UNIPROTKB|K7GQH3 - symbol:USP11 "Uncharacterized protein"...   107  3.4e-06   1
TAIR|locus:505006627 - symbol:UBP8 "ubiquitin-specific pr...   119  3.8e-06   1
UNIPROTKB|Q70EL3 - symbol:USP50 "Inactive ubiquitin carbo...   113  4.3e-06   1
WB|WBGene00008441 - symbol:E01B7.1 species:6239 "Caenorha...   117  5.8e-06   1
UNIPROTKB|F1NZV6 - symbol:USP32 "Ubiquitin carboxyl-termi...   108  1.1e-05   2
RGD|2303824 - symbol:Usp43 "ubiquitin specific peptidase ...   115  1.4e-05   1
UNIPROTKB|F1M2M9 - symbol:Usp43_predicted "Protein Usp43_...   115  1.4e-05   1
UNIPROTKB|F1LZN0 - symbol:Usp43_predicted "Ubiquitin carb...   115  1.4e-05   1

WARNING:  Descriptions of 55 database sequences were not reported due to the
          limiting value of parameter V = 100.


>UNIPROTKB|I3LRX7 [details] [associations]
            symbol:I3LRX7 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 Ensembl:ENSSSCT00000030942 OMA:NINNRNP
            Uniprot:I3LRX7
        Length = 489

 Score = 176 (67.0 bits), Expect = 1.2e-12, P = 1.2e-12
 Identities = 52/162 (32%), Positives = 76/162 (46%)

Query:     4 ENTWSQDECFSTASAASSFP-IPLPPPTS-SDVCEGPENFTGELSSL----FEISEDNDV 57
             + TW +      +  AS+F  +P   P+S S+      N   + S+     +   ++ D 
Sbjct:    34 DGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDY 93

Query:    58 SD---NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXX 111
             S+   N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                 
Sbjct:    94 SEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRG 153

Query:   112 XXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                  +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   154 EIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 195


>UNIPROTKB|E1C718 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0007179 "transforming growth factor beta receptor
            signaling pathway" evidence=IEA] [GO:0030509 "BMP signaling
            pathway" evidence=IEA] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=IEA] [GO:0046332 "SMAD binding"
            evidence=IEA] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AADN02009940
            EMBL:AADN02009941 IPI:IPI00580087 Ensembl:ENSGALT00000015894
            Uniprot:E1C718
        Length = 981

 Score = 180 (68.4 bits), Expect = 1.4e-12, P = 1.4e-12
 Identities = 51/161 (31%), Positives = 75/161 (46%)

Query:     4 ENTWSQDECFSTASAASSFP-IPLPPPTSSDVCEGPENFTGELSSL----FEISEDNDVS 58
             + TW +      +  AS+F  +P   P+ S+      N   + S+     +   ++ D S
Sbjct:   217 DGTWPRGSSTPKSPGASNFSTLPKISPSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDYS 276

Query:    59 D---NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXX 112
             +   +  Q G+CGL NLGNTCFM++ IQ L     L EYF N                  
Sbjct:   277 EPGRHNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGE 336

Query:   113 XVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                 +A L+++MWSG+YS V P  FK  +G   PQF  Y+Q
Sbjct:   337 IAKSYAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 377


>ZFIN|ZDB-GENE-041008-187 [details] [associations]
            symbol:usp4 "ubiquitin specific protease 4
            (proto-oncogene)" species:7955 "Danio rerio" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-041008-187 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            KO:K11835 GeneTree:ENSGT00670000097750 CTD:7375 EMBL:BX957236
            IPI:IPI00492306 RefSeq:XP_002662556.2 UniGene:Dr.125623
            UniGene:Dr.161797 UniGene:Dr.37682 Ensembl:ENSDART00000039868
            GeneID:449927 KEGG:dre:449927 NextBio:20832950 Uniprot:E7EZD6
        Length = 1009

 Score = 160 (61.4 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 39/112 (34%), Positives = 52/112 (46%)

Query:    45 LSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXX 104
             L S    S      ++ AQ G+CGL NLGNTCFM++ +Q L     L EYF         
Sbjct:   297 LGSYNSYSSSYSYRESAAQPGLCGLSNLGNTCFMNSALQCLSNTPPLTEYFLEDRYEAEI 356

Query:   105 XXXX---XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                          + +A LV++MW  + S V P  FK  +G   PQF  Y+Q
Sbjct:   357 NRENPLGMRGEIAEAYADLVKQMWLSRSSYVAPRTFKTQVGRFAPQFSGYQQ 408

 Score = 45 (20.9 bits), Expect = 1.7e-12, Sum P(2) = 1.7e-12
 Identities = 9/30 (30%), Positives = 15/30 (50%)

Query:     4 ENTWSQDECFSTASAASSFPIPLPPPTSSD 33
             + TW +  C S +S ++S      P  SS+
Sbjct:   237 DGTWPRQSCHSKSSTSTSRNYTTSPKPSSN 266


>UNIPROTKB|Q9Y4E8 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0016579
            "protein deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IDA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IMP]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=IMP;IDA;TAS] [GO:0030509 "BMP signaling pathway"
            evidence=IDA] [GO:0046332 "SMAD binding" evidence=IPI] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IMP]
            [GO:0005160 "transforming growth factor beta receptor binding"
            evidence=IPI] [GO:0030512 "negative regulation of transforming
            growth factor beta receptor signaling pathway" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005634 GO:GO:0005737 Reactome:REACT_111102 GO:GO:0006508
            GO:GO:0030509 GO:GO:0007179 GO:GO:0060389 GO:GO:0006511
            GO:GO:0008233 SUPFAM:SSF55205 GO:GO:0004197 GO:GO:0030512
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 eggNOG:COG5560
            HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864 MEROPS:C19.022
            OMA:RMDPLAK OrthoDB:EOG4DNF3R EMBL:AF106069 EMBL:AB011101
            EMBL:AF153604 EMBL:AK023703 EMBL:AK292337 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 EMBL:BC020688 EMBL:BC063454
            EMBL:BC125123 EMBL:AF013990 IPI:IPI00000728 IPI:IPI00219504
            IPI:IPI01015293 RefSeq:NP_001239007.1 RefSeq:NP_001239008.1
            RefSeq:NP_006304.1 UniGene:Hs.434951 PDB:1W6V PDB:3LMN PDB:3PPA
            PDB:3PV1 PDB:3T9L PDB:4A3O PDB:4A3P PDBsum:1W6V PDBsum:3LMN
            PDBsum:3PPA PDBsum:3PV1 PDBsum:3T9L PDBsum:4A3O PDBsum:4A3P
            ProteinModelPortal:Q9Y4E8 SMR:Q9Y4E8 IntAct:Q9Y4E8 STRING:Q9Y4E8
            PhosphoSite:Q9Y4E8 DMDM:28381406 PaxDb:Q9Y4E8 PRIDE:Q9Y4E8
            DNASU:9958 Ensembl:ENST00000280377 Ensembl:ENST00000312635
            Ensembl:ENST00000353364 GeneID:9958 KEGG:hsa:9958 UCSC:uc001srb.2
            UCSC:uc001src.2 CTD:9958 GeneCards:GC12P062706 H-InvDB:HIX0010773
            HGNC:HGNC:12613 HPA:HPA006237 MIM:604731 neXtProt:NX_Q9Y4E8
            PharmGKB:PA37239 InParanoid:Q9Y4E8 PhylomeDB:Q9Y4E8 ChiTaRS:USP15
            EvolutionaryTrace:Q9Y4E8 GenomeRNAi:9958 NextBio:37576
            ArrayExpress:Q9Y4E8 Bgee:Q9Y4E8 CleanEx:HS_USP15
            Genevestigator:Q9Y4E8 GermOnline:ENSG00000135655 Uniprot:Q9Y4E8
        Length = 981

 Score = 177 (67.4 bits), Expect = 2.9e-12, P = 2.9e-12
 Identities = 52/162 (32%), Positives = 76/162 (46%)

Query:     4 ENTWSQDECFSTASAASSFP-IPLPPPTS-SDVCEGPENFTGELSSL----FEISEDNDV 57
             + TW +      +  AS+F  +P   P+S S+      N   + S+     +   ++ D 
Sbjct:   217 DGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNMNNRNVKNSNYCLPSYTAYKNYDY 276

Query:    58 SD---NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXX 111
             S+   N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                 
Sbjct:   277 SEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRG 336

Query:   112 XXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                  +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   337 EIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 378


>MGI|MGI:101857 [details] [associations]
            symbol:Usp15 "ubiquitin specific peptidase 15" species:10090
            "Mus musculus" [GO:0003824 "catalytic activity" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISO]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=ISO]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005160 "transforming growth factor beta
            receptor binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0007179 "transforming growth factor beta
            receptor signaling pathway" evidence=ISO] [GO:0008152 "metabolic
            process" evidence=IDA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030509 "BMP
            signaling pathway" evidence=ISO] [GO:0035520 "monoubiquitinated
            protein deubiquitination" evidence=ISO] [GO:0046332 "SMAD binding"
            evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISO] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:101857
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
            GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 EMBL:CH466578
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 MEROPS:C19.022 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R CTD:9958 ChiTaRS:USP15 EMBL:AF468037
            EMBL:AK046332 EMBL:AK083303 EMBL:AK133852 EMBL:AK145749
            EMBL:AK161469 EMBL:AK168755 EMBL:AK122301 EMBL:BC050042
            IPI:IPI00154012 IPI:IPI00222152 IPI:IPI00222154 IPI:IPI00403342
            RefSeq:NP_081880.2 UniGene:Mm.244209 UniGene:Mm.470032
            ProteinModelPortal:Q8R5H1 SMR:Q8R5H1 STRING:Q8R5H1
            PhosphoSite:Q8R5H1 PaxDb:Q8R5H1 PRIDE:Q8R5H1
            Ensembl:ENSMUST00000020334 GeneID:14479 KEGG:mmu:14479
            UCSC:uc007hgn.1 UCSC:uc007hgt.1 UCSC:uc011xpf.1 InParanoid:Q8R5H1
            NextBio:286150 Bgee:Q8R5H1 CleanEx:MM_USP15 Genevestigator:Q8R5H1
            GermOnline:ENSMUSG00000020124 Uniprot:Q8R5H1
        Length = 981

 Score = 176 (67.0 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 52/162 (32%), Positives = 76/162 (46%)

Query:     4 ENTWSQDECFSTASAASSFP-IPLPPPTS-SDVCEGPENFTGELSSL----FEISEDNDV 57
             + TW +      +  AS+F  +P   P+S S+      N   + S+     +   ++ D 
Sbjct:   217 DGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDY 276

Query:    58 SD---NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXX 111
             S+   N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                 
Sbjct:   277 SEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRG 336

Query:   112 XXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                  +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   337 EIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 378


>UNIPROTKB|E2R988 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=IEA]
            [GO:0046332 "SMAD binding" evidence=IEA] [GO:0035520
            "monoubiquitinated protein deubiquitination" evidence=IEA]
            [GO:0030509 "BMP signaling pathway" evidence=IEA] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005160 "transforming growth factor
            beta receptor binding" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR013792
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0016579
            GO:GO:0004221 GeneTree:ENSGT00670000097750 OMA:RMDPLAK
            EMBL:AAEX03006985 Ensembl:ENSCAFT00000000496 Uniprot:E2R988
        Length = 982

 Score = 176 (67.0 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 52/162 (32%), Positives = 76/162 (46%)

Query:     4 ENTWSQDECFSTASAASSFP-IPLPPPTS-SDVCEGPENFTGELSSL----FEISEDNDV 57
             + TW +      +  AS+F  +P   P+S S+      N   + S+     +   ++ D 
Sbjct:   218 DGTWPRGPSAPKSPGASNFSALPKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDY 277

Query:    58 SD---NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXX 111
             S+   N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                 
Sbjct:   278 SEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRG 337

Query:   112 XXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                  +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   338 EIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 379


>UNIPROTKB|F1SKD5 [details] [associations]
            symbol:LOC100737425 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:RMDPLAK EMBL:AEMK01054830
            EMBL:AEMK01054840 EMBL:CU570842 EMBL:CU856603 EMBL:CU928889
            Ensembl:ENSSSCT00000000493 Uniprot:F1SKD5
        Length = 982

 Score = 176 (67.0 bits), Expect = 3.7e-12, P = 3.7e-12
 Identities = 52/162 (32%), Positives = 76/162 (46%)

Query:     4 ENTWSQDECFSTASAASSFP-IPLPPPTS-SDVCEGPENFTGELSSL----FEISEDNDV 57
             + TW +      +  AS+F  +P   P+S S+      N   + S+     +   ++ D 
Sbjct:   218 DGTWPRGPSTPKSPGASNFSTLPKISPSSLSNNYNNINNRNVKNSNYCLPSYTAYKNYDY 277

Query:    58 SD---NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXX 111
             S+   N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                 
Sbjct:   278 SEPGRNNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRG 337

Query:   112 XXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                  +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   338 EIAKSYAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 379


>UNIPROTKB|E1C719 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00822334 Ensembl:ENSGALT00000015893 Uniprot:E1C719
        Length = 953

 Score = 175 (66.7 bits), Expect = 4.5e-12, P = 4.5e-12
 Identities = 39/94 (41%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ IQ L     L EYF N                      +A 
Sbjct:   256 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAE 315

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+YS V P  FK  +G   PQF  Y+Q
Sbjct:   316 LIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 349


>UNIPROTKB|F1NFR2 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02009940 EMBL:AADN02009941
            IPI:IPI00575554 Ensembl:ENSGALT00000030681 Uniprot:F1NFR2
        Length = 955

 Score = 175 (66.7 bits), Expect = 4.5e-12, P = 4.5e-12
 Identities = 39/94 (41%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ IQ L     L EYF N                      +A 
Sbjct:   258 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKSYAE 317

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+YS V P  FK  +G   PQF  Y+Q
Sbjct:   318 LIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 351


>UNIPROTKB|F6Z5C0 [details] [associations]
            symbol:usp15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISS] [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0007179 "transforming growth factor beta receptor signaling
            pathway" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 KO:K11835 MEROPS:C19.022
            EMBL:AAMC01103598 EMBL:AAMC01103599 EMBL:AAMC01103600
            EMBL:AAMC01103601 EMBL:BC166318 RefSeq:NP_001121498.1
            GeneID:100158604 KEGG:xtr:100158604 Xenbase:XB-GENE-1008519
            Uniprot:F6Z5C0
        Length = 982

 Score = 175 (66.7 bits), Expect = 4.7e-12, P = 4.7e-12
 Identities = 39/94 (41%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ IQ L     L EYF N                      +A 
Sbjct:   284 QPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQDELNMDNPLGMRGEIAKSYAE 343

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+YS V P  FK  +G   PQF  Y+Q
Sbjct:   344 LIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 377


>UNIPROTKB|Q2HJE4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase 15"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0060389
            "pathway-restricted SMAD protein phosphorylation" evidence=ISS]
            [GO:0035520 "monoubiquitinated protein deubiquitination"
            evidence=ISS] [GO:0030509 "BMP signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0007179
            "transforming growth factor beta receptor signaling pathway"
            evidence=ISS] [GO:0046332 "SMAD binding" evidence=IEA] [GO:0005160
            "transforming growth factor beta receptor binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR013792 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0030509
            GO:GO:0007179 GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205
            GO:GO:0004197 GO:GO:0004843 GO:GO:0004221 GO:GO:0035520
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:DAAA02013374 EMBL:DAAA02013375
            EMBL:DAAA02013376 EMBL:DAAA02013377 EMBL:DAAA02013378 EMBL:BC105521
            IPI:IPI00697254 RefSeq:NP_001039895.1 RefSeq:XP_003586138.1
            UniGene:Bt.29017 ProteinModelPortal:Q2HJE4 SMR:Q2HJE4
            MEROPS:C19.022 PRIDE:Q2HJE4 Ensembl:ENSBTAT00000037574
            GeneID:538284 KEGG:bta:538284 InParanoid:Q2HJE4 OMA:RMDPLAK
            OrthoDB:EOG4DNF3R NextBio:20877322 Uniprot:Q2HJE4
        Length = 952

 Score = 173 (66.0 bits), Expect = 7.4e-12, P = 7.4e-12
 Identities = 39/97 (40%), Positives = 49/97 (50%)

Query:    60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDE 116
             N  Q G+CGL NLGNTCFM++  Q L     L EYF N                      
Sbjct:   253 NNEQPGLCGLSNLGNTCFMNSAFQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 312

Query:   117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +A L+++MWSG+YS V P  FK  +G   PQF  Y+Q
Sbjct:   313 YAELIKQMWSGKYSYVTPRAFKTQVGRFAPQFSGYQQ 349


>RGD|628795 [details] [associations]
            symbol:Usp15 "ubiquitin specific peptidase 15" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;IDA] [GO:0005160 "transforming
            growth factor beta receptor binding" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
            evidence=ISO;IDA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007179 "transforming growth
            factor beta receptor signaling pathway" evidence=ISO;ISS]
            [GO:0008152 "metabolic process" evidence=ISO] [GO:0016579 "protein
            deubiquitination" evidence=ISO;IDA] [GO:0030509 "BMP signaling
            pathway" evidence=ISO;ISS] [GO:0035520 "monoubiquitinated protein
            deubiquitination" evidence=ISO;ISS] [GO:0046332 "SMAD binding"
            evidence=ISO] [GO:0060389 "pathway-restricted SMAD protein
            phosphorylation" evidence=ISO;ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:628795
            GO:GO:0005634 GO:GO:0005737 GO:GO:0030509 GO:GO:0007179
            GO:GO:0060389 GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004197
            GO:GO:0004843 GO:GO:0004221 GO:GO:0035520 HSSP:Q93009
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            MEROPS:C19.022 OrthoDB:EOG4DNF3R EMBL:AF106657 IPI:IPI00205801
            RefSeq:NP_660185.1 UniGene:Rn.161933 ProteinModelPortal:Q9R085
            SMR:Q9R085 STRING:Q9R085 PhosphoSite:Q9R085 PRIDE:Q9R085
            GeneID:171329 KEGG:rno:171329 NextBio:622082 Genevestigator:Q9R085
            Uniprot:Q9R085
        Length = 952

 Score = 173 (66.0 bits), Expect = 7.4e-12, P = 7.4e-12
 Identities = 39/97 (40%), Positives = 50/97 (51%)

Query:    60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDE 116
             N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                      
Sbjct:   253 NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 312

Query:   117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   313 YAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 349


>UNIPROTKB|J9PBI4 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03006985
            Ensembl:ENSCAFT00000048170 Uniprot:J9PBI4
        Length = 953

 Score = 173 (66.0 bits), Expect = 7.4e-12, P = 7.4e-12
 Identities = 39/97 (40%), Positives = 50/97 (51%)

Query:    60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDE 116
             N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                      
Sbjct:   254 NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 313

Query:   117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   314 YAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 350


>UNIPROTKB|E9PCQ3 [details] [associations]
            symbol:USP15 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR013792 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0008234
            GO:GO:0006511 SUPFAM:SSF55205 GO:GO:0004221 EMBL:AC048342
            EMBL:AC079035 EMBL:AC117370 HGNC:HGNC:12613 ChiTaRS:USP15
            IPI:IPI00219505 ProteinModelPortal:E9PCQ3 SMR:E9PCQ3 PRIDE:E9PCQ3
            Ensembl:ENST00000393654 ArrayExpress:E9PCQ3 Bgee:E9PCQ3
            Uniprot:E9PCQ3
        Length = 956

 Score = 173 (66.0 bits), Expect = 7.4e-12, P = 7.4e-12
 Identities = 39/97 (40%), Positives = 50/97 (51%)

Query:    60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDE 116
             N  Q G+CGL NLGNTCFM++ IQ L     L EYF N                      
Sbjct:   257 NNEQPGLCGLSNLGNTCFMNSAIQCLSNTPPLTEYFLNDKYQEELNFDNPLGMRGEIAKS 316

Query:   117 FALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +A L+++MWSG++S V P  FK  +G   PQF  Y+Q
Sbjct:   317 YAELIKQMWSGKFSYVTPRAFKTQVGRFAPQFSGYQQ 353


>UNIPROTKB|E2R6J5 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0034394 "protein
            localization to cell surface" evidence=IEA] [GO:0031685 "adenosine
            receptor binding" evidence=IEA] [GO:0031647 "regulation of protein
            stability" evidence=IEA] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11835
            GeneTree:ENSGT00670000097750 CTD:7375 OMA:CERISRY EMBL:AAEX03012231
            RefSeq:XP_533829.3 Ensembl:ENSCAFT00000018443 GeneID:476624
            KEGG:cfa:476624 NextBio:20852247 Uniprot:E2R6J5
        Length = 964

 Score = 152 (58.6 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ +Q L   + L +YF                      + +A 
Sbjct:   298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDKYEAEINRDNPLGMKGEIAEAYAE 357

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   358 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQ 391

 Score = 40 (19.1 bits), Expect = 3.5e-11, Sum P(2) = 3.5e-11
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query:     4 ENTWSQDECFSTASAASSFPIPLPPPTSS 32
             + TW +    S +S A S   P  P +S+
Sbjct:   221 DGTWPRQTLQSKSSTAPSRNFPTSPTSSA 249


>UNIPROTKB|F1NE88 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AADN02056463 EMBL:AADN02056462
            IPI:IPI00586703 Ensembl:ENSGALT00000006026 Uniprot:F1NE88
        Length = 963

 Score = 156 (60.0 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
 Identities = 35/99 (35%), Positives = 51/99 (51%)

Query:    58 SDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXV 114
             S + +Q G+CGL NLGNTCFM++ +Q L     L +YF                      
Sbjct:   317 SASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIA 376

Query:   115 DEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             + +A L++++WSG+ S V P  FK  +G   PQF  Y+Q
Sbjct:   377 EAYAELIKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQ 415

 Score = 35 (17.4 bits), Expect = 4.4e-11, Sum P(2) = 4.4e-11
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query:     4 ENTWSQDECFSTASAASS--FPIPLPPPTSS 32
             + TW Q    + +S A+S  F     P  SS
Sbjct:   244 DGTWPQHPFLAKSSTATSRNFTTSSKPSASS 274


>UNIPROTKB|F1NE89 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0031397
            "negative regulation of protein ubiquitination" evidence=IEA]
            [GO:0031647 "regulation of protein stability" evidence=IEA]
            [GO:0031685 "adenosine receptor binding" evidence=IEA] [GO:0034394
            "protein localization to cell surface" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:AADN02056463
            EMBL:AADN02056462 IPI:IPI00596700 Ensembl:ENSGALT00000006024
            Uniprot:F1NE89
        Length = 966

 Score = 156 (60.0 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
 Identities = 35/99 (35%), Positives = 51/99 (51%)

Query:    58 SDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXV 114
             S + +Q G+CGL NLGNTCFM++ +Q L     L +YF                      
Sbjct:   320 SASLSQPGLCGLSNLGNTCFMNSALQCLSNTPPLTDYFLEDKYEAEINHSNPLGMRGEIA 379

Query:   115 DEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             + +A L++++WSG+ S V P  FK  +G   PQF  Y+Q
Sbjct:   380 EAYAELIKQIWSGRQSHVAPRMFKTQVGRFAPQFSGYQQ 418

 Score = 35 (17.4 bits), Expect = 4.5e-11, Sum P(2) = 4.5e-11
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query:     4 ENTWSQDECFSTASAASS--FPIPLPPPTSS 32
             + TW Q    + +S A+S  F     P  SS
Sbjct:   247 DGTWPQHPFLAKSSTATSRNFTTSSKPSASS 277


>UNIPROTKB|Q5JXD3 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase 11"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AL096791 UniGene:Hs.171501
            HGNC:HGNC:12609 ChiTaRS:USP11 IPI:IPI01015533 SMR:Q5JXD3
            MINT:MINT-1384809 Ensembl:ENST00000377078 Uniprot:Q5JXD3
        Length = 140

 Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
 Identities = 37/106 (34%), Positives = 53/106 (50%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             +SE+++  D   Q G+CGL NLGNTCFM++ +Q L     L EYF N             
Sbjct:    22 MSEEDE--DFKGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPL 79

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                    + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:    80 GMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQ 125


>UNIPROTKB|F1PQR0 [details] [associations]
            symbol:USP50 "Uncharacterized protein" species:9615 "Canis
            lupus familiaris" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:AAEX03016119
            EMBL:AAEX03016120 Ensembl:ENSCAFT00000024071 Uniprot:F1PQR0
        Length = 334

 Score = 151 (58.2 bits), Expect = 2.8e-10, P = 2.8e-10
 Identities = 34/86 (39%), Positives = 44/86 (51%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVR 122
             ++GV GLRNLGNTC+M+A +Q L + S LVEYF +                   FA ++ 
Sbjct:    40 RQGVTGLRNLGNTCYMNAILQCLCSVSPLVEYFVSGKYITALQRDCREVATA--FAYVMT 97

Query:   123 KMWSGQYSIVHPSDFKQILGVHYPQF 148
              MW G    V P  F+  LG  YP F
Sbjct:    98 DMWLGDSECVSPEVFRSALGSLYPAF 123


>UNIPROTKB|B4DKA8 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 UniGene:Hs.443731 HGNC:HGNC:12631
            HOGENOM:HOG000231497 HOVERGEN:HBG012631 ChiTaRS:USP8
            InterPro:IPR015063 Pfam:PF08969 EMBL:AC012170 EMBL:AK296480
            IPI:IPI00941811 SMR:B4DKA8 STRING:B4DKA8 Ensembl:ENST00000425032
            UCSC:uc010ufh.2 Uniprot:B4DKA8
        Length = 1012

 Score = 147 (56.8 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
 Identities = 31/89 (34%), Positives = 45/89 (50%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNX---XXXXXXXXXXXXXXXVDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L  A  L +YF                      +EF ++++ +
Sbjct:   672 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 731

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+GQY  + P DFK  +G    QF  Y Q
Sbjct:   732 WTGQYRYISPKDFKITIGKINDQFAGYSQ 760

 Score = 36 (17.7 bits), Expect = 3.5e-10, Sum P(2) = 3.5e-10
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query:    14 STASAASSFPIPLPPPTSSDVCEGPENFTGE 44
             S   +  S P    PP S +V E  E  +G+
Sbjct:   261 SLEESIPSKPAAQTPPASIEVDENIELISGQ 291


>UNIPROTKB|P40818 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase 8"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0007265 "Ras protein signal transduction"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0010008
            "endosome membrane" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IDA] [GO:0005769 "early endosome"
            evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IDA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA;TAS] [GO:0019897 "extrinsic to
            plasma membrane" evidence=IDA] [GO:0005515 "protein binding"
            evidence=IPI] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=TAS] [GO:0008283 "cell proliferation" evidence=TAS]
            [GO:0000281 "cytokinesis after mitosis" evidence=IMP] [GO:0005737
            "cytoplasm" evidence=IDA] [GO:0016579 "protein deubiquitination"
            evidence=IMP] [GO:0030496 "midbody" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005829
            GO:GO:0005634 Reactome:REACT_111102 GO:GO:0007265 GO:GO:0008283
            GO:GO:0019897 GO:GO:0010008 Gene3D:3.40.250.10 InterPro:IPR001763
            SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0000281
            GO:GO:0006511 GO:GO:0030496 GO:GO:0007032 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004843
            GO:GO:0004221 eggNOG:COG5533 PDB:2GWF PDBsum:2GWF KO:K11839
            PDB:3N3K PDBsum:3N3K BRENDA:3.1.2.15 EMBL:D29956 EMBL:BX537420
            EMBL:BC038801 EMBL:BC051345 EMBL:BC110590 IPI:IPI00030915
            RefSeq:NP_001122082.1 RefSeq:NP_001122083.1 RefSeq:NP_005145.3
            UniGene:Hs.443731 PDB:1WHB PDB:2A9U PDB:2GFO PDBsum:1WHB
            PDBsum:2A9U PDBsum:2GFO ProteinModelPortal:P40818 SMR:P40818
            DIP:DIP-40365N IntAct:P40818 MINT:MINT-244406 STRING:P40818
            MEROPS:C19.011 PhosphoSite:P40818 DMDM:731046 PaxDb:P40818
            PeptideAtlas:P40818 PRIDE:P40818 Ensembl:ENST00000307179
            Ensembl:ENST00000396444 Ensembl:ENST00000433963 GeneID:9101
            KEGG:hsa:9101 UCSC:uc001zyl.4 CTD:9101 GeneCards:GC15P050716
            H-InvDB:HIX0172812 HGNC:HGNC:12631 HPA:HPA004869 MIM:603158
            neXtProt:NX_P40818 PharmGKB:PA37256 HOGENOM:HOG000231497
            HOVERGEN:HBG012631 InParanoid:P40818 OMA:KINDQFA OrthoDB:EOG4XKV6B
            PhylomeDB:P40818 ChiTaRS:USP8 EvolutionaryTrace:P40818
            GenomeRNAi:9101 NextBio:34117 ArrayExpress:P40818 Bgee:P40818
            CleanEx:HS_USP8 Genevestigator:P40818 GermOnline:ENSG00000138592
            InterPro:IPR015063 Pfam:PF08969 Uniprot:P40818
        Length = 1118

 Score = 147 (56.8 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
 Identities = 31/89 (34%), Positives = 45/89 (50%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNX---XXXXXXXXXXXXXXXVDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L  A  L +YF                      +EF ++++ +
Sbjct:   778 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 837

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+GQY  + P DFK  +G    QF  Y Q
Sbjct:   838 WTGQYRYISPKDFKITIGKINDQFAGYSQ 866

 Score = 36 (17.7 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query:    14 STASAASSFPIPLPPPTSSDVCEGPENFTGE 44
             S   +  S P    PP S +V E  E  +G+
Sbjct:   338 SLEESIPSKPAAQTPPASIEVDENIELISGQ 368


>MGI|MGI:1922333 [details] [associations]
            symbol:Usp50 "ubiquitin specific peptidase 50" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1922333 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000231498
            GeneTree:ENSGT00670000097591 MEROPS:C19.058 HOVERGEN:HBG098592
            EMBL:AK007018 EMBL:AK015766 EMBL:BC061020 IPI:IPI00420445
            IPI:IPI00461643 RefSeq:NP_083439.2 UniGene:Mm.389373
            ProteinModelPortal:Q6P8X6 SMR:Q6P8X6 PhosphoSite:Q6P8X6
            PRIDE:Q6P8X6 Ensembl:ENSMUST00000028842 GeneID:75083 KEGG:mmu:75083
            CTD:373509 InParanoid:Q6P8X6 OMA:HFQGVTG NextBio:342171 Bgee:Q6P8X6
            CleanEx:MM_USP50 Genevestigator:Q6P8X6
            GermOnline:ENSMUSG00000027364 Uniprot:Q6P8X6
        Length = 390

 Score = 150 (57.9 bits), Expect = 5.2e-10, P = 5.2e-10
 Identities = 39/114 (34%), Positives = 55/114 (48%)

Query:    38 PENFTGELSSLFEISEDNDVSDNCAQ---RGVCGLRNLGNTCFMSAGIQSLVAASALVEY 94
             P +  G   +L E ++ + + ++  Q   +GV GLRNLGNTC+M+A +Q L + S LVEY
Sbjct:    13 PADDFGAYYNLAECADYDSLPESKTQPHFQGVTGLRNLGNTCYMNAILQCLCSVSPLVEY 72

Query:    95 FTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQF 148
             F +                   FA L+  MW G    V P  F   +G  YP F
Sbjct:    73 FLSGKYITALKKDCSEVTTA--FAYLMTDMWLGDSDCVSPEIFLSAVGSLYPAF 124


>FB|FBgn0038862 [details] [associations]
            symbol:Ubpy "UBPY ortholog" species:7227 "Drosophila
            melanogaster" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0090263 "positive regulation of
            canonical Wnt receptor signaling pathway" evidence=IMP] [GO:0008587
            "imaginal disc-derived wing margin morphogenesis" evidence=IMP]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0045880 "positive
            regulation of smoothened signaling pathway" evidence=IGI]
            [GO:0016579 "protein deubiquitination" evidence=IMP] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0005622
            Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0090263 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0008587 GO:GO:0045880 HSSP:Q93009
            InterPro:IPR015063 Pfam:PF08969 EMBL:AY122247
            ProteinModelPortal:Q8MQX4 SMR:Q8MQX4 MEROPS:C19.A47 PRIDE:Q8MQX4
            UCSC:CG5798-RA FlyBase:FBgn0038862 InParanoid:Q8MQX4
            OrthoDB:EOG470RZ7 ArrayExpress:Q8MQX4 Bgee:Q8MQX4 Uniprot:Q8MQX4
        Length = 896

 Score = 139 (54.0 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
 Identities = 28/91 (30%), Positives = 48/91 (52%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXXXXXVDEFALLVR 122
             RG+ GL+NLGNTC+M++ +Q L     L EY  ++                ++E A L++
Sbjct:   560 RGLTGLKNLGNTCYMNSILQCLSNTPQLTEYCISDKYKNYISRSNKTNGQVIEEVAALIK 619

Query:   123 KMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             ++W+GQY  V   D + ++G +   F+   Q
Sbjct:   620 ELWNGQYKCVASRDLRYVVGQYQKIFRGVDQ 650

 Score = 41 (19.5 bits), Expect = 5.4e-10, Sum P(2) = 5.4e-10
 Identities = 12/43 (27%), Positives = 20/43 (46%)

Query:    23 PIPLPPPTSSDVCEGPENFTGELSSLFEISEDND--VSDNCAQ 63
             P P  PP+     E     +  L SL +++ D D  ++ N A+
Sbjct:   483 PTPSGPPSPGRNLEDVHVVSDSLESLLQLTGDPDPTIAPNKAE 525


>UNIPROTKB|E1BF60 [details] [associations]
            symbol:USP50 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:DAAA02029067
            EMBL:DAAA02029068 EMBL:DAAA02029069 IPI:IPI00686382
            Ensembl:ENSBTAT00000015823 Uniprot:E1BF60
        Length = 374

 Score = 149 (57.5 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 36/95 (37%), Positives = 47/95 (49%)

Query:    55 NDVSDNCAQ-RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXX 113
             N+  +N    +GV GLRNLGNTC+M+A +Q L + S LVEYF +                
Sbjct:    36 NEAEENQPHLQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYINALQKDCSEVAT 95

Query:   114 VDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQF 148
                FA ++  MW G    V P  F+  LG  YP F
Sbjct:    96 A--FAYVMTDMWLGDSDCVSPEIFRSALGNLYPVF 128


>MGI|MGI:98905 [details] [associations]
            symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
            species:10090 "Mus musculus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
            evidence=ISO] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=ISO] [GO:0031647 "regulation of protein
            stability" evidence=ISO] [GO:0031685 "adenosine receptor binding"
            evidence=ISO] [GO:0034394 "protein localization to cell surface"
            evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:98905
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 EMBL:CH466560
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            HOVERGEN:HBG000864 GeneTree:ENSGT00670000097750 CTD:7375
            OMA:CERISRY OrthoDB:EOG4C5CHR MEROPS:C19.010 EMBL:L00681
            EMBL:AF026469 EMBL:AK089425 EMBL:AK143582 EMBL:AK149964
            EMBL:AK169933 EMBL:AK171271 IPI:IPI00115701 PIR:I58376
            RefSeq:NP_035808.2 UniGene:Mm.3974 PDB:3JYU PDBsum:3JYU
            ProteinModelPortal:P35123 SMR:P35123 STRING:P35123
            PhosphoSite:P35123 PaxDb:P35123 PRIDE:P35123
            Ensembl:ENSMUST00000035237 GeneID:22258 KEGG:mmu:22258
            InParanoid:Q8BTL9 EvolutionaryTrace:P35123 NextBio:302345
            Bgee:P35123 CleanEx:MM_USP4 Genevestigator:P35123
            GermOnline:ENSMUSG00000032612 Uniprot:P35123
        Length = 962

 Score = 155 (59.6 bits), Expect = 6.2e-10, P = 6.2e-10
 Identities = 35/94 (37%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ +Q L   + L EYF                      + +A 
Sbjct:   298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   358 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQ 391


>UNIPROTKB|H7C189 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC121247 HGNC:HGNC:12627 ChiTaRS:USP4
            ProteinModelPortal:H7C189 Ensembl:ENST00000431357 Uniprot:H7C189
        Length = 621

 Score = 152 (58.6 bits), Expect = 7.2e-10, P = 7.2e-10
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ +Q L   + L +YF                      + +A 
Sbjct:    55 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAE 114

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   115 LIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 148


>RGD|1587387 [details] [associations]
            symbol:Usp4 "ubiquitin specific peptidase 4 (proto-oncogene)"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISO;ISS] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISO;ISS]
            [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
            evidence=ISO;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=ISO;ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=ISO;ISS] [GO:0031647
            "regulation of protein stability" evidence=ISO;ISS] [GO:0031685
            "adenosine receptor binding" evidence=IEA;ISO] [GO:0034394 "protein
            localization to cell surface" evidence=ISO;ISS] [GO:0046872 "metal
            ion binding" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            RGD:1587387 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0031647 EMBL:CH473954 GO:GO:0006511
            PROSITE:PS50053 GO:GO:0034394 GO:GO:0031397 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375
            EMBL:BC166460 IPI:IPI00914176 RefSeq:NP_001128484.1
            UniGene:Rn.92126 ProteinModelPortal:B2GUZ1 SMR:B2GUZ1
            PhosphoSite:B2GUZ1 PRIDE:B2GUZ1 GeneID:290864 KEGG:rno:290864
            NextBio:631779 Genevestigator:B2GUZ1 Uniprot:B2GUZ1
        Length = 961

 Score = 154 (59.3 bits), Expect = 8.0e-10, P = 8.0e-10
 Identities = 35/94 (37%), Positives = 48/94 (51%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ +Q L     L EYF                      + +A 
Sbjct:   298 QPGLCGLGNLGNTCFMNSALQCLSNTGPLTEYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   358 LIKQMWSGRDTHVAPRMFKTQVGRFAPQFSGYQQ 391


>RGD|1304979 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10116
            "Rattus norvegicus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005622 "intracellular" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=ISO] [GO:0005769 "early endosome"
            evidence=ISO] [GO:0005829 "cytosol" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=ISO] [GO:0007265 "Ras
            protein signal transduction" evidence=ISO] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0019897 "extrinsic to
            plasma membrane" evidence=ISO] [GO:0030496 "midbody" evidence=ISO]
            [GO:0031313 "extrinsic to endosome membrane" evidence=ISO]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            [GO:0001669 "acrosomal vesicle" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 RGD:1304979 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00782723 Ensembl:ENSRNOT00000057174
            UCSC:RGD:1304979 ArrayExpress:D4A7S5 Uniprot:D4A7S5
        Length = 416

 Score = 148 (57.2 bits), Expect = 9.9e-10, P = 9.9e-10
 Identities = 30/81 (37%), Positives = 44/81 (54%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSG 127
             GLRNLGNTC+M++ +Q L  A  L +YF N                 +EF ++++ +W+G
Sbjct:    96 GLRNLGNTCYMNSILQCLCNAPHLADYF-NRNCYQDDINRDVFSEVAEEFGIIMKALWTG 154

Query:   128 QYSIVHPSDFKQILGVHYPQF 148
             QY  + P DFK  +G    QF
Sbjct:   155 QYRYISPKDFKVTIGKINDQF 175


>UNIPROTKB|A6QR55 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=ISS]
            [GO:0005634 "nucleus" evidence=ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0034394 "protein
            localization to cell surface" evidence=ISS] [GO:0031647 "regulation
            of protein stability" evidence=ISS] [GO:0031397 "negative
            regulation of protein ubiquitination" evidence=ISS] [GO:0016579
            "protein deubiquitination" evidence=ISS] [GO:0031685 "adenosine
            receptor binding" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00299 GO:GO:0005634 GO:GO:0005737 GO:GO:0046872
            GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 HOVERGEN:HBG000864
            GeneTree:ENSGT00670000097750 EMBL:BC150120 IPI:IPI00697204
            RefSeq:NP_001093789.1 UniGene:Bt.52457 ProteinModelPortal:A6QR55
            SMR:A6QR55 PRIDE:A6QR55 Ensembl:ENSBTAT00000015787 GeneID:508042
            KEGG:bta:508042 CTD:7375 InParanoid:A6QR55 OMA:CERISRY
            OrthoDB:EOG4C5CHR NextBio:20868329 Uniprot:A6QR55
        Length = 963

 Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 47/153 (30%), Positives = 71/153 (46%)

Query:    13 FSTASAASSFPIPLPPPTSSDVCEGPE-NFTGELSS-LFEISEDNDVSDNC-------AQ 63
             F+T+  +S+ P      ++S +  G   N +G  SS +         S NC        Q
Sbjct:   241 FTTSPKSSASPYS--SVSASPIANGDSTNTSGMHSSGVSRGGSGFSASYNCQESPLTHVQ 298

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFALL 120
              G+CGL NLGNTCFM++ +Q L   + L +YF                      + +A L
Sbjct:   299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAEL 358

Query:   121 VRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   359 IKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391


>UNIPROTKB|F1SPT0 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0034394 "protein localization to cell
            surface" evidence=IEA] [GO:0031685 "adenosine receptor binding"
            evidence=IEA] [GO:0031647 "regulation of protein stability"
            evidence=IEA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=IEA] [GO:0016579 "protein
            deubiquitination" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 GO:GO:0005634
            GO:GO:0005737 GO:GO:0031647 GO:GO:0006511 GO:GO:0034394
            GO:GO:0031397 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 KO:K11835
            GeneTree:ENSGT00670000097750 OMA:CERISRY EMBL:FP326740
            RefSeq:NP_001230117.1 UniGene:Ssc.23825 UniGene:Ssc.2787
            Ensembl:ENSSSCT00000012460 GeneID:100512072 KEGG:ssc:100512072
            Uniprot:F1SPT0
        Length = 963

 Score = 153 (58.9 bits), Expect = 1.0e-09, P = 1.0e-09
 Identities = 47/153 (30%), Positives = 71/153 (46%)

Query:    13 FSTASAASSFPIPLPPPTSSDVCEGPE-NFTGELSS-LFEISEDNDVSDNC-------AQ 63
             F+T+  +S+ P      ++S +  G   N +G  SS +         S NC        Q
Sbjct:   241 FTTSPKSSASPYS--SVSASPIANGDSTNTSGMHSSGVSRGGSGFSASYNCQESPSSHVQ 298

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFALL 120
              G+CGL NLGNTCFM++ +Q L   + L +YF                      + +A L
Sbjct:   299 PGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAEL 358

Query:   121 VRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   359 IKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391


>MGI|MGI:2384312 [details] [associations]
            symbol:Usp11 "ubiquitin specific peptidase 11" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
            "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] Reactome:REACT_93132
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 MGI:MGI:2384312
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:CH466625 EMBL:AL807240
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835 MEROPS:C19.014
            HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237 EMBL:AK166523
            EMBL:BC005470 IPI:IPI00378163 RefSeq:NP_663603.3 UniGene:Mm.34489
            ProteinModelPortal:Q99K46 SMR:Q99K46 STRING:Q99K46
            PhosphoSite:Q99K46 PaxDb:Q99K46 PRIDE:Q99K46
            Ensembl:ENSMUST00000033383 GeneID:236733 KEGG:mmu:236733
            GeneTree:ENSGT00670000097750 InParanoid:B1AXB2 NextBio:383051
            Bgee:Q99K46 CleanEx:MM_USP11 Genevestigator:Q99K46
            GermOnline:ENSMUSG00000031066 Uniprot:Q99K46
        Length = 921

 Score = 152 (58.6 bits), Expect = 1.2e-09, P = 1.2e-09
 Identities = 37/115 (32%), Positives = 57/115 (49%)

Query:    42 TGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXX 101
             + +L  +  I ++++  D   Q G+CGL NLGNTCFM++ +Q L     L EYF N    
Sbjct:   234 SAQLCGMNNIPDEDE--DFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYL 291

Query:   102 XXXXXXX---XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                             + +A LV++ WSG +  + P+ FK  +G    QF  Y+Q
Sbjct:   292 EELNFRNPLGMKGELAEAYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQ 346


>UNIPROTKB|Q13107 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IMP] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0031685
            "adenosine receptor binding" evidence=IPI] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0034394 "protein localization to cell surface"
            evidence=IDA] [GO:0031397 "negative regulation of protein
            ubiquitination" evidence=IMP] [GO:0031647 "regulation of protein
            stability" evidence=IDA] [GO:0005764 "lysosome" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0046872
            GO:GO:0005764 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 EMBL:AC121247 eggNOG:COG5560 HOGENOM:HOG000264375
            KO:K11835 HOVERGEN:HBG000864 CTD:7375 OMA:CERISRY EMBL:U20657
            EMBL:AF017305 EMBL:AF017306 EMBL:AK291795 EMBL:BC068017
            EMBL:BC125130 IPI:IPI00011836 IPI:IPI00216257 IPI:IPI00927927
            PIR:T09478 RefSeq:NP_001238806.1 RefSeq:NP_003354.2
            RefSeq:NP_955475.1 UniGene:Hs.403828 UniGene:Hs.77500 PDB:2Y6E
            PDBsum:2Y6E ProteinModelPortal:Q13107 SMR:Q13107 IntAct:Q13107
            STRING:Q13107 MEROPS:C19.010 PhosphoSite:Q13107 DMDM:116242839
            PaxDb:Q13107 PRIDE:Q13107 Ensembl:ENST00000265560
            Ensembl:ENST00000351842 Ensembl:ENST00000416417 GeneID:7375
            KEGG:hsa:7375 UCSC:uc003cwp.2 UCSC:uc003cwr.2 GeneCards:GC03M049290
            HGNC:HGNC:12627 HPA:HPA018499 MIM:603486 neXtProt:NX_Q13107
            PharmGKB:PA37252 InParanoid:Q13107 PhylomeDB:Q13107 ChiTaRS:USP4
            EvolutionaryTrace:Q13107 GenomeRNAi:7375 NextBio:28880
            ArrayExpress:Q13107 Bgee:Q13107 CleanEx:HS_USP4
            Genevestigator:Q13107 GermOnline:ENSG00000114316 Uniprot:Q13107
        Length = 963

 Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ +Q L   + L +YF                      + +A 
Sbjct:   298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   358 LIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391


>UNIPROTKB|Q5RCD3 [details] [associations]
            symbol:USP4 "Ubiquitin carboxyl-terminal hydrolase 4"
            species:9601 "Pongo abelii" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
            [GO:0005737 "cytoplasm" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0031397 "negative regulation of
            protein ubiquitination" evidence=ISS] [GO:0031647 "regulation of
            protein stability" evidence=ISS] [GO:0034394 "protein localization
            to cell surface" evidence=ISS] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 Prosite:PS00299 GO:GO:0005634 GO:GO:0005737
            GO:GO:0046872 GO:GO:0031647 GO:GO:0006511 PROSITE:PS50053
            GO:GO:0034394 GO:GO:0031397 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 KO:K11835 HOVERGEN:HBG000864 CTD:7375 EMBL:CR858339
            RefSeq:NP_001125307.1 UniGene:Pab.8716 HSSP:Q9Y4E8
            ProteinModelPortal:Q5RCD3 SMR:Q5RCD3 PRIDE:Q5RCD3 GeneID:100172206
            KEGG:pon:100172206 InParanoid:Q5RCD3 Uniprot:Q5RCD3
        Length = 963

 Score = 152 (58.6 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 34/94 (36%), Positives = 49/94 (52%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             Q G+CGL NLGNTCFM++ +Q L   + L +YF                      + +A 
Sbjct:   298 QPGLCGLGNLGNTCFMNSALQCLSNTAPLTDYFLKDEYEAEINRDNPLGMKGEIAEAYAE 357

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L+++MWSG+ + V P  FK  +G   PQF  Y+Q
Sbjct:   358 LIKQMWSGRDAHVAPRMFKTQVGRFAPQFSGYQQ 391


>UNIPROTKB|F1RYM1 [details] [associations]
            symbol:USP50 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:HFQGVTG EMBL:CU469118
            Ensembl:ENSSSCT00000005123 Uniprot:F1RYM1
        Length = 376

 Score = 146 (56.5 bits), Expect = 1.3e-09, P = 1.3e-09
 Identities = 35/93 (37%), Positives = 46/93 (49%)

Query:    55 NDVSDNCAQ-RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXX 113
             N+  +N    +GV GLRNLGNTC+M+A +Q L + S LVEYF +                
Sbjct:    34 NEADENQPHFQGVTGLRNLGNTCYMNAILQCLCSISPLVEYFLSGKYITALQKDCSEVAT 93

Query:   114 VDEFALLVRKMWSGQYSIVHPSDFKQILGVHYP 146
                FA ++  MW G    V P  F+  LG  YP
Sbjct:    94 A--FAYVMTDMWLGDSECVSPEIFRSALGNLYP 124


>UNIPROTKB|F1LYZ4 [details] [associations]
            symbol:F1LYZ4 "Uncharacterized protein" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097591 IPI:IPI00767267
            Ensembl:ENSRNOT00000015238 Uniprot:F1LYZ4
        Length = 390

 Score = 146 (56.5 bits), Expect = 1.4e-09, P = 1.4e-09
 Identities = 34/85 (40%), Positives = 42/85 (49%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRK 123
             +GV GLRNLGNTC+M+A +Q L + S LVEYF +                   FA L+  
Sbjct:    42 QGVTGLRNLGNTCYMNAILQCLCSTSPLVEYFLSGKYITALQKDCSEVTTA--FAYLMTD 99

Query:   124 MWSGQYSIVHPSDFKQILGVHYPQF 148
             MW G    V P  F   +G  YP F
Sbjct:   100 MWLGDSDCVSPEIFLSAVGSLYPAF 124


>DICTYBASE|DDB_G0284381 [details] [associations]
            symbol:DDB_G0284381 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0284381 GO:GO:0008234 GO:GO:0006511
            EMBL:AAFI02000064 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            RefSeq:XP_638597.1 ProteinModelPortal:Q54PQ7
            EnsemblProtists:DDB0237697 GeneID:8624568 KEGG:ddi:DDB_G0284381
            OMA:AYELPHA Uniprot:Q54PQ7
        Length = 1089

 Score = 152 (58.6 bits), Expect = 1.5e-09, P = 1.5e-09
 Identities = 39/105 (37%), Positives = 48/105 (45%)

Query:    53 EDNDVSDNCAQRG-VCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX--- 108
             E N  +      G VCGL NLGNTCFM++ IQ L     LVEYF +              
Sbjct:   388 EQNGSTKELISNGKVCGLSNLGNTCFMNSSIQCLAHTGPLVEYFLSGRYLGDINKTNPLG 447

Query:   109 XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                   D +  L++ MWSG  S V P   K I+G + PQF    Q
Sbjct:   448 MKGQIADIYGKLMKDMWSGS-SCVAPKHLKWIIGKYAPQFSGISQ 491


>UNIPROTKB|Q5D006 [details] [associations]
            symbol:Usp11 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 RGD:1303052
            GO:GO:0005634 GO:GO:0005737 GO:GO:0006511 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 EMBL:CH474009 HOGENOM:HOG000264375
            KO:K11835 MEROPS:C19.014 HOVERGEN:HBG000864 CTD:8237 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:BC090333 IPI:IPI00421768
            RefSeq:NP_001008861.2 UniGene:Rn.2492 Ensembl:ENSRNOT00000051956
            GeneID:408217 KEGG:rno:408217 InParanoid:Q5D006 NextBio:696448
            Genevestigator:Q5D006 Uniprot:Q5D006
        Length = 921

 Score = 151 (58.2 bits), Expect = 1.6e-09, P = 1.6e-09
 Identities = 37/103 (35%), Positives = 50/103 (48%)

Query:    54 DNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XX 110
             D D  D   Q G+CGL NLGNTCFM++ +Q L     L EYF N                
Sbjct:   245 DED-EDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNRYLEELNFRNPLGMK 303

Query:   111 XXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                 + +A LV++ WSG +  + P+ FK  +G    QF  Y+Q
Sbjct:   304 GELAEAYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQ 346


>UNIPROTKB|G5E9A6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005737 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL096791 EMBL:CH471164 UniGene:Hs.171501 HGNC:HGNC:12609
            ChiTaRS:USP11 ProteinModelPortal:G5E9A6 SMR:G5E9A6 PRIDE:G5E9A6
            Ensembl:ENST00000377107 ArrayExpress:G5E9A6 Bgee:G5E9A6
            Uniprot:G5E9A6
        Length = 920

 Score = 150 (57.9 bits), Expect = 2.0e-09, P = 2.0e-09
 Identities = 37/106 (34%), Positives = 53/106 (50%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             +SE+++  D   Q G+CGL NLGNTCFM++ +Q L     L EYF N             
Sbjct:   252 MSEEDE--DFKGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPL 309

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                    + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   310 GMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQ 355


>UNIPROTKB|P51784 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase 11"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0016579 "protein deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=TAS] [GO:0005737
            "cytoplasm" evidence=IDA] Reactome:REACT_17015 InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            EMBL:AL096791 eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            MEROPS:C19.014 HOVERGEN:HBG000864 EMBL:BC140849 EMBL:BC000350
            EMBL:AB073597 EMBL:U44839 IPI:IPI00184533 RefSeq:NP_004642.2
            UniGene:Hs.171501 ProteinModelPortal:P51784 SMR:P51784
            DIP:DIP-27567N IntAct:P51784 MINT:MINT-1147600 STRING:P51784
            PhosphoSite:P51784 DMDM:251757432 PaxDb:P51784 PRIDE:P51784
            Ensembl:ENST00000218348 GeneID:8237 KEGG:hsa:8237 UCSC:uc004dhp.3
            CTD:8237 GeneCards:GC0XP047093 HGNC:HGNC:12609 HPA:HPA003103
            HPA:HPA037536 MIM:300050 neXtProt:NX_P51784 PharmGKB:PA37235
            InParanoid:P51784 OMA:GICGLTN PhylomeDB:P51784 ChiTaRS:USP11
            GenomeRNAi:8237 NextBio:30985 ArrayExpress:P51784 Bgee:P51784
            CleanEx:HS_USP11 Genevestigator:P51784 GermOnline:ENSG00000102226
            Uniprot:P51784
        Length = 963

 Score = 150 (57.9 bits), Expect = 2.1e-09, P = 2.1e-09
 Identities = 37/106 (34%), Positives = 53/106 (50%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             +SE+++  D   Q G+CGL NLGNTCFM++ +Q L     L EYF N             
Sbjct:   295 MSEEDE--DFKGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLNNCYLEELNFRNPL 352

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                    + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   353 GMKGEIAEAYADLVKQAWSGHHRSIVPHVFKNKVGHFASQFLGYQQ 398


>UNIPROTKB|Q2KHV7 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0050821 "protein stabilization"
            evidence=ISS] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISS] [GO:0048471
            "perinuclear region of cytoplasm" evidence=IEA] [GO:0042802
            "identical protein binding" evidence=IEA] [GO:0031625 "ubiquitin
            protein ligase binding" evidence=IEA] [GO:0030332 "cyclin binding"
            evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0046872 GO:GO:0045931
            GO:GO:0008234 GO:GO:0000122 GO:GO:0007049 GO:GO:0007517
            GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            EMBL:BC112866 IPI:IPI00694687 RefSeq:NP_001039728.1
            UniGene:Bt.21721 ProteinModelPortal:Q2KHV7 SMR:Q2KHV7
            MEROPS:C19.013 PRIDE:Q2KHV7 Ensembl:ENSBTAT00000012857
            GeneID:522980 KEGG:bta:522980 CTD:9099 HOGENOM:HOG000048720
            InParanoid:Q2KHV7 OMA:GFKPGPP OrthoDB:EOG47M1XH NextBio:20873641
            Uniprot:Q2KHV7
        Length = 606

 Score = 147 (56.8 bits), Expect = 2.4e-09, P = 2.4e-09
 Identities = 45/156 (28%), Positives = 70/156 (44%)

Query:    11 ECFSTASAASSFPIPLPPPTSSDVCEG---P-------ENFTGE-LSSLFEISEDNDVSD 59
             E +   ++A   P P PP  + +V      P       E   G+ L S    S   D  +
Sbjct:   201 ENYGRKASAPQVPTPTPPSRAPEVLSPTYRPSGRYSLWEKGKGQALVSSRSSSPGRDTMN 260

Query:    60 NCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXXXXXVDEFA 118
             + + +G+ GLRNLGNTCFM++ +Q L     L +Y                    ++EFA
Sbjct:   261 SKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYLRDLSHSSRAHTALMEEFA 320

Query:   119 LLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   321 KLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 356


>UNIPROTKB|E1C0G5 [details] [associations]
            symbol:E1C0G5 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0000281 "cytokinesis after
            mitosis" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0007032 "endosome
            organization" evidence=IEA] [GO:0007265 "Ras protein signal
            transduction" evidence=IEA] [GO:0019897 "extrinsic to plasma
            membrane" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:AADN02041582 IPI:IPI00592203
            Ensembl:ENSGALT00000009484 Uniprot:E1C0G5
        Length = 1082

 Score = 150 (57.9 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 32/89 (35%), Positives = 45/89 (50%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXX---VDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L  A  L EYF                      +EF ++++ +
Sbjct:   742 GLRNLGNTCYMNSILQCLCNAPHLAEYFNKNLYQDDINRSNFLGHKGEVAEEFGVIMKAL 801

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+GQY  + P DFK  +G    QF  Y Q
Sbjct:   802 WTGQYKYISPKDFKITIGKINDQFAGYSQ 830


>WB|WBGene00019259 [details] [associations]
            symbol:H34C03.2 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            GeneTree:ENSGT00670000097750 EMBL:FO080598 PIR:T33734
            RefSeq:NP_501035.1 ProteinModelPortal:Q9TYY8 SMR:Q9TYY8
            PaxDb:Q9TYY8 EnsemblMetazoa:H34C03.2 GeneID:177437
            KEGG:cel:CELE_H34C03.2 UCSC:H34C03.2 CTD:177437 WormBase:H34C03.2
            HOGENOM:HOG000017757 InParanoid:Q9TYY8 OMA:WKAFGIP NextBio:896816
            Uniprot:Q9TYY8
        Length = 900

 Score = 149 (57.5 bits), Expect = 2.5e-09, P = 2.5e-09
 Identities = 35/92 (38%), Positives = 45/92 (48%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYF-TNXXXXXXXXXXXXXXXXVDEFAL--LV 121
             G CGL NLGNTCFM++  Q L     L EYF  N                    A+  L+
Sbjct:   273 GACGLSNLGNTCFMASAFQCLSNMPPLREYFLANTYQNDINEDNPLGTHGHLAMAVGELM 332

Query:   122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             + MWSG Y+ ++P  FK I+G   P+F  Y Q
Sbjct:   333 KGMWSGDYASINPRKFKSIIGQFAPRFNGYSQ 364


>UNIPROTKB|E1BF70 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 EMBL:DAAA02029069 EMBL:DAAA02029070
            IPI:IPI00825651 Ensembl:ENSBTAT00000015809 ArrayExpress:E1BF70
            Uniprot:E1BF70
        Length = 421

 Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
 Identities = 30/86 (34%), Positives = 44/86 (51%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSG 127
             GLRNLGNTC+M++ +Q L     L +YF                   +EF ++++ +W+G
Sbjct:    96 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRTCCEVA--EEFGIIMKALWTG 153

Query:   128 QYSIVHPSDFKQILGVHYPQFKDYRQ 153
             QY  + P DFK  +G    QF  Y Q
Sbjct:   154 QYRYISPKDFKITIGKINDQFAGYSQ 179


>ZFIN|ZDB-GENE-041212-59 [details] [associations]
            symbol:usp2a "ubiquitin specific peptidase 2a"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            ZFIN:ZDB-GENE-041212-59 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000098024 EMBL:BX548078 IPI:IPI00993616
            Ensembl:ENSDART00000123148 ArrayExpress:E7FEC1 Bgee:E7FEC1
            Uniprot:E7FEC1
        Length = 600

 Score = 144 (55.7 bits), Expect = 4.9e-09, P = 4.9e-09
 Identities = 36/101 (35%), Positives = 52/101 (51%)

Query:    55 NDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXXXXX 113
             N  +   AQ G+ GLRNLGNTCFM++ +Q L    +L +Y   N                
Sbjct:   257 NTKNSKSAQ-GLVGLRNLGNTCFMNSILQCLSNTQSLRDYCLHNSHRRDLNNNNRTHTAL 315

Query:   114 VDEFALLVRKMWSGQYS-IVHPSDFKQILGVHYPQFKDYRQ 153
             ++EFA L++ MW+   S  V PS+FK  +  + P+F  Y Q
Sbjct:   316 MEEFAKLIQTMWTSSSSEAVSPSEFKTQIQRYAPRFVGYNQ 356


>UNIPROTKB|F1RYL9 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            GeneTree:ENSGT00670000097591 OMA:KINDQFA InterPro:IPR015063
            Pfam:PF08969 EMBL:CU469118 EMBL:CU582768 Ensembl:ENSSSCT00000005124
            Uniprot:F1RYL9
        Length = 1089

 Score = 147 (56.8 bits), Expect = 5.2e-09, P = 5.2e-09
 Identities = 31/89 (34%), Positives = 45/89 (50%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNX---XXXXXXXXXXXXXXXVDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L  A  L +YF                      +EF ++++ +
Sbjct:   749 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQEDINRSNLLGHKGEVAEEFGIIMKAL 808

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+GQY  + P DFK  +G    QF  Y Q
Sbjct:   809 WTGQYRYISPKDFKITIGKINDQFAGYSQ 837


>TAIR|locus:2139222 [details] [associations]
            symbol:UBP10 "AT4G10590" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 HSSP:P40818
            eggNOG:COG5560 HOGENOM:HOG000264375 KO:K11835
            ProtClustDB:CLSN2689389 EMBL:AY054463 EMBL:BT010363 IPI:IPI00534120
            PIR:T04194 RefSeq:NP_567363.1 RefSeq:NP_849356.1 UniGene:At.10964
            UniGene:At.67146 ProteinModelPortal:Q93Y01 SMR:Q93Y01
            MEROPS:C19.A03 PaxDb:Q93Y01 PRIDE:Q93Y01 EnsemblPlants:AT4G10590.1
            EnsemblPlants:AT4G10590.2 GeneID:826651 KEGG:ath:AT4G10590
            TAIR:At4g10590 InParanoid:Q93Y01 OMA:MDQDILL PhylomeDB:Q93Y01
            Genevestigator:Q93Y01 Uniprot:Q93Y01
        Length = 910

 Score = 146 (56.5 bits), Expect = 5.3e-09, P = 5.3e-09
 Identities = 50/160 (31%), Positives = 71/160 (44%)

Query:     8 SQDECFSTASAASSFPIPLPPPTSS-DVCEGPENFTGELS----SLF-EISEDNDVSDNC 61
             SQ    ST +  +   +PL P  SS  +  GP    G  +    SLF  I+ ++D S++ 
Sbjct:   234 SQSAMSSTGNELAL--VPLEPSRSSVTIAGGPTLSNGHSTTSNFSLFPRITSEDDGSNSL 291

Query:    62 A------QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX--XX 113
             +      + G+ GL NLGNTCFM++ +Q L     +VEYF                    
Sbjct:   292 SILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPLGMCGEL 351

Query:   114 VDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                F  L++K+WS   + V P  FK  L    PQF  Y Q
Sbjct:   352 AIAFGDLLKKLWSSGRNSVAPRAFKTKLARFAPQFSGYNQ 391


>UNIPROTKB|E2RH35 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 GO:GO:0008234 Gene3D:3.40.250.10
            InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821 PROSITE:PS50206
            GO:GO:0006511 GO:GO:0004221 KO:K11839 GeneTree:ENSGT00670000097591
            CTD:9101 OMA:KINDQFA InterPro:IPR015063 Pfam:PF08969
            EMBL:AAEX03016119 RefSeq:XP_535474.1 Ensembl:ENSCAFT00000024054
            GeneID:478299 KEGG:cfa:478299 Uniprot:E2RH35
        Length = 1116

 Score = 147 (56.8 bits), Expect = 5.4e-09, P = 5.4e-09
 Identities = 31/89 (34%), Positives = 45/89 (50%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNX---XXXXXXXXXXXXXXXVDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L  A  L +YF                      +EF ++++ +
Sbjct:   776 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 835

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+GQY  + P DFK  +G    QF  Y Q
Sbjct:   836 WTGQYRYISPKDFKITIGKINDQFAGYSQ 864


>RGD|1303052 [details] [associations]
            symbol:Usp11 "ubiquitin specific peptidase 11" species:10116
            "Rattus norvegicus" [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=TAS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;TAS]
            [GO:0005737 "cytoplasm" evidence=ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS50235 RGD:1303052 GO:GO:0005634 GO:GO:0006511
            GO:GO:0004197 GO:GO:0004221 MEROPS:C19.014 HOVERGEN:HBG000864
            IPI:IPI00421768 UniGene:Rn.2492 EMBL:BN000322
            ProteinModelPortal:Q6IE71 PRIDE:Q6IE71 UCSC:RGD:1303052
            InParanoid:Q6IE71 ArrayExpress:Q6IE71 Genevestigator:Q6IE71
            Uniprot:Q6IE71
        Length = 700

 Score = 144 (55.7 bits), Expect = 6.1e-09, P = 6.1e-09
 Identities = 36/104 (34%), Positives = 51/104 (49%)

Query:    54 DNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVA-ASALVEYFTNXXXXXXXXXXX---X 109
             D D  D   Q G+CGL NLGNTCFM++ +Q  ++    L EYF N               
Sbjct:    23 DED-EDFQGQPGICGLTNLGNTCFMNSALQQCLSNVPQLTEYFLNNRYLEELNFRNPLGM 81

Query:   110 XXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                  + +A LV++ WSG +  + P+ FK  +G    QF  Y+Q
Sbjct:    82 KGELAEAYADLVKQTWSGYHRSIVPNVFKNKVGHFASQFLGYQQ 125


>UNIPROTKB|F1NES4 [details] [associations]
            symbol:LOC100858727 "Uncharacterized protein" species:9031
            "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0005829 "cytosol" evidence=IEA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS01360
            PROSITE:PS50235 PROSITE:PS50865 GO:GO:0005829 GO:GO:0046872
            GO:GO:0008270 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0006511
            GO:GO:0004843 GO:GO:0004221 InterPro:IPR007052 PROSITE:PS51203
            GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
            Pfam:PF08959 EMBL:AADN02014171 IPI:IPI00585404
            Ensembl:ENSGALT00000011032 Uniprot:F1NES4
        Length = 610

 Score = 143 (55.4 bits), Expect = 6.5e-09, P = 6.5e-09
 Identities = 44/134 (32%), Positives = 55/134 (41%)

Query:    24 IPLPPPTSSDVCEGPENFTGELSS-LFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGI 82
             IP P PT    C  P      +S+   E  ED D        G  GL NLGNTCFM++ I
Sbjct:   184 IPSPKPT----CMVPPMTHSPVSAESVEDDEDEDEKKKVCLPGFTGLVNLGNTCFMNSVI 239

Query:    83 QSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQ 139
             QSL     L +YF +                      FA+L+R +W G +    PS  K 
Sbjct:   240 QSLSNTRELRDYFHDRSFESEINYNNPLGTGGRLAIGFAMLLRALWKGTHHAFQPSKLKA 299

Query:   140 ILGVHYPQFKDYRQ 153
             I+     QF  Y Q
Sbjct:   300 IVASKASQFTGYAQ 313


>UNIPROTKB|F1SAF6 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 OMA:SASHRSY EMBL:CU915638
            RefSeq:XP_003357373.1 Ensembl:ENSSSCT00000016486 GeneID:100520041
            KEGG:ssc:100520041 ArrayExpress:F1SAF6 Uniprot:F1SAF6
        Length = 396

 Score = 140 (54.3 bits), Expect = 6.7e-09, P = 6.7e-09
 Identities = 32/101 (31%), Positives = 51/101 (50%)

Query:    55 NDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXXXXX 113
             N   ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y                    
Sbjct:    46 NKAKNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAHTAL 105

Query:   114 VDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             ++EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   106 MEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 146


>UNIPROTKB|I3LI16 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0050821 "protein stabilization"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=IEA] [GO:0042802 "identical protein binding"
            evidence=IEA] [GO:0031625 "ubiquitin protein ligase binding"
            evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 EMBL:CU915638 GeneID:100520041
            KEGG:ssc:100520041 RefSeq:XP_003129987.1 Ensembl:ENSSSCT00000024719
            Uniprot:I3LI16
        Length = 606

 Score = 142 (55.0 bits), Expect = 8.2e-09, P = 8.2e-09
 Identities = 33/104 (31%), Positives = 52/104 (50%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXX 110
             S   D  ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y                 
Sbjct:   253 SPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLSHSSSAH 312

Query:   111 XXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                ++EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   313 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 356


>MGI|MGI:1858178 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10090
            "Mus musculus" [GO:0000122 "negative regulation of transcription
            from RNA polymerase II promoter" evidence=ISO] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISO] [GO:0005634
            "nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005813 "centrosome" evidence=ISO] [GO:0005938 "cell cortex"
            evidence=IDA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007517 "muscle organ
            development" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0030332 "cyclin
            binding" evidence=ISO] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=ISO] [GO:0042802 "identical protein binding"
            evidence=IDA] [GO:0045931 "positive regulation of mitotic cell
            cycle" evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=ISO;IDA]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISO] [GO:0048643 "positive regulation of
            skeletal muscle tissue development" evidence=ISO] [GO:0050821
            "protein stabilization" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1858178 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 GO:GO:0046872
            GO:GO:0045931 GO:GO:0008234 GO:GO:0000122 GO:GO:0007049
            GO:GO:0042802 GO:GO:0007517 GO:GO:0006511 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642
            HOGENOM:HOG000231498 HOVERGEN:HBG011164 KO:K11833
            GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AY255637 EMBL:AY255638
            EMBL:AY255639 EMBL:AY255640 EMBL:AB041799 EMBL:AK138799
            EMBL:BC017517 EMBL:AF079565 IPI:IPI00377286 IPI:IPI00409197
            IPI:IPI00785316 IPI:IPI00785464 RefSeq:NP_058088.2
            RefSeq:NP_932759.1 RefSeq:NP_932760.2 UniGene:Mm.272770
            ProteinModelPortal:O88623 SMR:O88623 STRING:O88623
            PhosphoSite:O88623 PRIDE:O88623 Ensembl:ENSMUST00000034508
            Ensembl:ENSMUST00000065461 Ensembl:ENSMUST00000114830
            Ensembl:ENSMUST00000176416 Ensembl:ENSMUST00000177054 GeneID:53376
            KEGG:mmu:53376 UCSC:uc009pbn.1 UCSC:uc009pbp.1 UCSC:uc012grp.1
            InParanoid:O88623 NextBio:310185 Bgee:O88623 CleanEx:MM_USP2
            Genevestigator:O88623 GermOnline:ENSMUSG00000032010 Uniprot:O88623
        Length = 613

 Score = 142 (55.0 bits), Expect = 8.3e-09, P = 8.3e-09
 Identities = 33/104 (31%), Positives = 52/104 (50%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXX 110
             S   D  ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y                 
Sbjct:   260 SPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAH 319

Query:   111 XXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                ++EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   320 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFMGYNQ 363


>UNIPROTKB|E2RSX3 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0050821 "protein
            stabilization" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] [GO:0045931 "positive regulation of
            mitotic cell cycle" evidence=IEA] [GO:0042802 "identical protein
            binding" evidence=IEA] [GO:0031625 "ubiquitin protein ligase
            binding" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0005938
            "cell cortex" evidence=IEA] [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938
            GO:GO:0048471 GO:GO:0050821 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0006511 GO:GO:0016579 GO:GO:0004221 KO:K11833
            GeneTree:ENSGT00670000098024 CTD:9099 OMA:GFKPGPP EMBL:AAEX03003436
            EMBL:AAEX03003437 RefSeq:XP_859639.1 ProteinModelPortal:E2RSX3
            Ensembl:ENSCAFT00000019129 GeneID:608188 KEGG:cfa:608188
            NextBio:20893859 Uniprot:E2RSX3
        Length = 606

 Score = 141 (54.7 bits), Expect = 1.0e-08, P = 1.0e-08
 Identities = 36/110 (32%), Positives = 55/110 (50%)

Query:    46 SSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXX 104
             SSL   S   D  ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y           
Sbjct:   248 SSLSS-SPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLS 306

Query:   105 XXXXXXXXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      ++EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   307 HSSNVHTALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 356


>RGD|621073 [details] [associations]
            symbol:Usp2 "ubiquitin specific peptidase 2" species:10116
            "Rattus norvegicus" [GO:0000122 "negative regulation of
            transcription from RNA polymerase II promoter"
            evidence=IEA;ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO;ISS;IMP] [GO:0005634 "nucleus"
            evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005813
            "centrosome" evidence=IDA] [GO:0005938 "cell cortex"
            evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA;ISO;ISS;IDA]
            [GO:0030332 "cyclin binding" evidence=IEA;ISO] [GO:0031625
            "ubiquitin protein ligase binding" evidence=IEA;ISO] [GO:0042802
            "identical protein binding" evidence=IEA;ISO] [GO:0045931 "positive
            regulation of mitotic cell cycle" evidence=IEA;ISO;ISS] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0048471 "perinuclear region
            of cytoplasm" evidence=IEA;ISO;IDA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IDA]
            [GO:0048643 "positive regulation of skeletal muscle tissue
            development" evidence=IDA] [GO:0050821 "protein stabilization"
            evidence=IEA;ISO;ISS] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:621073 GO:GO:0005938 GO:GO:0005634 GO:GO:0005813 GO:GO:0048471
            GO:GO:0050821 GO:GO:0046872 GO:GO:0045931 GO:GO:0008234
            GO:GO:0000122 GO:GO:0007049 GO:GO:0007517 GO:GO:0006511
            EMBL:CH473975 GO:GO:0016579 GO:GO:0004221 GO:GO:0048643
            eggNOG:COG5533 HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 GeneTree:ENSGT00670000098024
            MEROPS:C19.013 CTD:9099 OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453
            EMBL:AF202454 EMBL:AF106658 EMBL:AF106659 EMBL:BC085719
            IPI:IPI00213304 IPI:IPI00213307 RefSeq:NP_446226.2
            UniGene:Rn.203590 ProteinModelPortal:Q5U349 SMR:Q5U349
            DIP:DIP-48683N STRING:Q5U349 Ensembl:ENSRNOT00000009975
            Ensembl:ENSRNOT00000036051 GeneID:115771 KEGG:rno:115771
            UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 33/104 (31%), Positives = 52/104 (50%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXX 110
             S   D  ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y                 
Sbjct:   265 SPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAH 324

Query:   111 XXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                ++EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   325 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 368


>UNIPROTKB|Q5U349 [details] [associations]
            symbol:Usp2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:10116 "Rattus norvegicus" [GO:0005938 "cell cortex"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0030332 "cyclin binding" evidence=IEA]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:621073 GO:GO:0005938
            GO:GO:0005634 GO:GO:0005813 GO:GO:0048471 GO:GO:0050821
            GO:GO:0046872 GO:GO:0045931 GO:GO:0008234 GO:GO:0000122
            GO:GO:0007049 GO:GO:0007517 GO:GO:0006511 EMBL:CH473975
            GO:GO:0016579 GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533
            HSSP:Q93009 GO:GO:0048642 HOGENOM:HOG000231498 HOVERGEN:HBG011164
            KO:K11833 GeneTree:ENSGT00670000098024 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH OMA:SASHRSY EMBL:AF202453 EMBL:AF202454
            EMBL:AF106658 EMBL:AF106659 EMBL:BC085719 IPI:IPI00213304
            IPI:IPI00213307 RefSeq:NP_446226.2 UniGene:Rn.203590
            ProteinModelPortal:Q5U349 SMR:Q5U349 DIP:DIP-48683N STRING:Q5U349
            Ensembl:ENSRNOT00000009975 Ensembl:ENSRNOT00000036051 GeneID:115771
            KEGG:rno:115771 UCSC:RGD:621073 InParanoid:Q9R083 NextBio:618951
            ArrayExpress:Q5U349 Genevestigator:Q5U349 Uniprot:Q5U349
        Length = 618

 Score = 141 (54.7 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 33/104 (31%), Positives = 52/104 (50%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXX 110
             S   D  ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y                 
Sbjct:   265 SPGRDTMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLGHTSSAH 324

Query:   111 XXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                ++EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   325 TALMEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 368


>TAIR|locus:2037985 [details] [associations]
            symbol:UBP11 "AT1G32850" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002684
            GenomeReviews:CT485782_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AC006424 HSSP:P40818 eggNOG:COG5560 HOGENOM:HOG000264375
            KO:K11835 ProtClustDB:CLSN2689389 IPI:IPI00534425 PIR:C86453
            RefSeq:NP_174562.2 UniGene:At.51891 ProteinModelPortal:Q9MAQ3
            SMR:Q9MAQ3 MEROPS:C19.A04 EnsemblPlants:AT1G32850.1 GeneID:840179
            KEGG:ath:AT1G32850 TAIR:At1g32850 InParanoid:Q9MAQ3 OMA:HCSASEC
            PhylomeDB:Q9MAQ3 Genevestigator:Q9MAQ3 Uniprot:Q9MAQ3
        Length = 892

 Score = 143 (55.4 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 46/144 (31%), Positives = 62/144 (43%)

Query:    24 IPLPPPTSS--DVCEGPENFTGELSSLFEISE------DNDVSDNC----AQRGVCGLRN 71
             +PL P  S   D+  G    +   S+ F+ S        +DVS        +RG+ GL+N
Sbjct:   246 VPLEPMRSDAMDIVRGGGTLSNGHSNGFKFSFFGRNTFKDDVSSRTFGKGEKRGLGGLQN 305

Query:    72 LGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXX--XXXXXXVDEFALLVRKMWSGQY 129
             LGNTCFM++ +Q L     +VEYF                       F  L+RK+WS   
Sbjct:   306 LGNTCFMNSTLQCLAHTPPIVEYFLQDYRSDINAKNPLGMRGELAIAFGELLRKLWSSGQ 365

Query:   130 SIVHPSDFKQILGVHYPQFKDYRQ 153
             + V P  FK  L    PQF  Y Q
Sbjct:   366 NTVAPRAFKTKLARFAPQFSGYNQ 389


>UNIPROTKB|K7GLG2 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GeneTree:ENSGT00670000097750 EMBL:FP710256
            Ensembl:ENSSSCT00000034750 Uniprot:K7GLG2
        Length = 756

 Score = 142 (55.0 bits), Expect = 1.1e-08, P = 1.1e-08
 Identities = 35/105 (33%), Positives = 48/105 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---XX 108
             S   +  D   Q G+CGL NLGNTCFM++ +Q L     L EYF                
Sbjct:    87 SATEEEEDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLG 146

Query:   109 XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                   + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   147 MKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQ 191


>ZFIN|ZDB-GENE-081104-421 [details] [associations]
            symbol:usp11 "ubiquitin specific peptidase 11"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 ZFIN:ZDB-GENE-081104-421 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00670000097750 EMBL:CR457452
            EMBL:CR847787 IPI:IPI00890594 Ensembl:ENSDART00000075624
            ArrayExpress:F1QPF4 Bgee:F1QPF4 Uniprot:F1QPF4
        Length = 990

 Score = 143 (55.4 bits), Expect = 1.2e-08, P = 1.2e-08
 Identities = 35/93 (37%), Positives = 48/93 (51%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFALLV 121
             GVCGL NLGNTCFM++ +Q L     L EYF                      + +A ++
Sbjct:   240 GVCGLTNLGNTCFMNSALQCLSNTPPLTEYFLKNLYLEELNFSNPLGMKGEIAEAYADVI 299

Query:   122 RKMWSGQ-YSIVHPSDFKQILGVHYPQFKDYRQ 153
             ++MWSG+ YS+V P  FK  +G    QF  Y+Q
Sbjct:   300 KQMWSGRHYSVV-PRVFKTKVGHFASQFLGYQQ 331


>UNIPROTKB|Q0IIM6 [details] [associations]
            symbol:USP8 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0030496 "midbody" evidence=IEA]
            [GO:0019897 "extrinsic to plasma membrane" evidence=IEA]
            [GO:0007265 "Ras protein signal transduction" evidence=IEA]
            [GO:0007032 "endosome organization" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0005769 "early endosome" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IEA]
            [GO:0000281 "cytokinesis after mitosis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 Pfam:PF00581 GO:GO:0007265
            GO:GO:0019897 Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450
            SUPFAM:SSF52821 PROSITE:PS50206 GO:GO:0006511 GO:GO:0005769
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004843 GO:GO:0004221
            eggNOG:COG5533 KO:K11839 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OMA:KINDQFA OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969
            EMBL:DAAA02029069 EMBL:DAAA02029070 EMBL:BC122571 IPI:IPI00697060
            RefSeq:NP_001069594.1 UniGene:Bt.9664 SMR:Q0IIM6 STRING:Q0IIM6
            Ensembl:ENSBTAT00000033814 GeneID:538743 KEGG:bta:538743
            InParanoid:Q0IIM6 NextBio:20877551 Uniprot:Q0IIM6
        Length = 1085

 Score = 143 (55.4 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 30/89 (33%), Positives = 44/89 (49%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNX---XXXXXXXXXXXXXXXVDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L     L +YF                      +EF ++++ +
Sbjct:   745 GLRNLGNTCYMNSILQCLCNTPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 804

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+GQY  + P DFK  +G    QF  Y Q
Sbjct:   805 WTGQYRYISPKDFKITIGKINDQFAGYSQ 833


>UNIPROTKB|J9PB02 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            Ensembl:ENSCAFT00000044288 Uniprot:J9PB02
        Length = 757

 Score = 141 (54.7 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 35/106 (33%), Positives = 49/106 (46%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---X 107
             + E+ D      Q G+CGL NLGNTCFM++ +Q L     L EYF               
Sbjct:    89 LEEEEDFQ---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPL 145

Query:   108 XXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                    + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   146 GMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQ 191


>UNIPROTKB|F1RWV6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:GICGLTN
            EMBL:FP710256 Ensembl:ENSSSCT00000013421 Uniprot:F1RWV6
        Length = 921

 Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 35/105 (33%), Positives = 48/105 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---XX 108
             S   +  D   Q G+CGL NLGNTCFM++ +Q L     L EYF                
Sbjct:   247 SATEEEEDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPLG 306

Query:   109 XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                   + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   307 MKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQ 351


>TAIR|locus:2139202 [details] [associations]
            symbol:UBP9 "AT4G10570" species:3702 "Arabidopsis
            thaliana" [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA;ISS]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 EMBL:CP002687
            GenomeReviews:CT486007_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL161517 EMBL:AL049523 EMBL:AF118222 EMBL:BT004132
            IPI:IPI00521385 PIR:T04192 RefSeq:NP_192795.3 UniGene:At.48842
            HSSP:P40818 ProteinModelPortal:Q9ZSB5 SMR:Q9ZSB5 MEROPS:C19.A02
            PaxDb:Q9ZSB5 PRIDE:Q9ZSB5 EnsemblPlants:AT4G10570.1 GeneID:826649
            KEGG:ath:AT4G10570 TAIR:At4g10570 eggNOG:COG5560
            HOGENOM:HOG000264375 InParanoid:Q9ZSB5 KO:K11835 OMA:ENSANEC
            PhylomeDB:Q9ZSB5 ProtClustDB:CLSN2689389 Genevestigator:Q9ZSB5
            Uniprot:Q9ZSB5
        Length = 923

 Score = 142 (55.0 bits), Expect = 1.4e-08, P = 1.4e-08
 Identities = 50/166 (30%), Positives = 73/166 (43%)

Query:     2 GIENTWSQDECFSTASAASSFPIPLPPPTSS-DVCEGPENFTGELS----SLF-EISEDN 55
             G+ ++ SQ    ST +  +   +PL P  S   +  GP    G  +    SLF  I+ ++
Sbjct:   230 GLSSS-SQSAMSSTGNELAL--VPLEPSRSIVTIAGGPTLSNGHSTTSNFSLFPRITSED 286

Query:    56 DVSDNCA------QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXX 109
             D  D+ +      + G+ GL NLGNTCFM++ +Q L     +VEYF              
Sbjct:   287 DGRDSLSILGKGEKGGLAGLSNLGNTCFMNSALQCLAHTPPIVEYFLQDYSDDINRDNPL 346

Query:   110 XX--XXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      F  L++K+WS   + V P  FK  L    PQF  Y Q
Sbjct:   347 GMCGELAIAFGDLLKKLWSSGRNAVAPRAFKTKLARFAPQFSGYNQ 392


>UNIPROTKB|J9P3M3 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11835
            CTD:8237 GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            RefSeq:NP_001183969.1 Ensembl:ENSCAFT00000047257 GeneID:404014
            KEGG:cfa:404014 Uniprot:J9P3M3
        Length = 770

 Score = 141 (54.7 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 35/106 (33%), Positives = 49/106 (46%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---X 107
             + E+ D      Q G+CGL NLGNTCFM++ +Q L     L EYF               
Sbjct:    89 LEEEEDFQ---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPL 145

Query:   108 XXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                    + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   146 GMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQ 191


>UNIPROTKB|E9PPM2 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 KO:K11833
            CTD:9099 EMBL:AP003396 RefSeq:NP_001230688.1 UniGene:Hs.524085
            DNASU:9099 GeneID:9099 KEGG:hsa:9099 HGNC:HGNC:12618 ChiTaRS:USP2
            GenomeRNAi:9099 NextBio:34107 IPI:IPI01009002
            ProteinModelPortal:E9PPM2 SMR:E9PPM2 Ensembl:ENST00000455332
            UCSC:uc001pwn.4 ArrayExpress:E9PPM2 Bgee:E9PPM2 Uniprot:E9PPM2
        Length = 362

 Score = 136 (52.9 bits), Expect = 1.5e-08, P = 1.5e-08
 Identities = 32/92 (34%), Positives = 47/92 (51%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXXXXXVDEFALLVR 122
             +G+ GLRNLGNTCFM++ +Q L     L +Y                    V+EFA L++
Sbjct:    21 QGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAHTALVEEFAKLIQ 80

Query:   123 KMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:    81 TIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 112


>UNIPROTKB|O75604 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007517 "muscle organ development" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0005813
            "centrosome" evidence=IEA] [GO:0005938 "cell cortex" evidence=IEA]
            [GO:0042802 "identical protein binding" evidence=IEA] [GO:0048642
            "negative regulation of skeletal muscle tissue development"
            evidence=IEA] [GO:0048643 "positive regulation of skeletal muscle
            tissue development" evidence=IEA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            [GO:0050821 "protein stabilization" evidence=IMP;IDA] [GO:0045931
            "positive regulation of mitotic cell cycle" evidence=IMP]
            [GO:0000122 "negative regulation of transcription from RNA
            polymerase II promoter" evidence=IMP] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IMP;IDA] [GO:0030332 "cyclin
            binding" evidence=IPI] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0031625 "ubiquitin protein ligase binding" evidence=IPI]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=TAS]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0005938 GO:GO:0005634
            GO:GO:0005813 GO:GO:0048471 GO:GO:0050821 EMBL:CH471065
            GO:GO:0046872 GO:GO:0045931 GO:GO:0000122 GO:GO:0007049
            GO:GO:0007517 GO:GO:0006511 GO:GO:0004197 GO:GO:0016579
            GO:GO:0004221 GO:GO:0048643 eggNOG:COG5533 GO:GO:0048642 PDB:3NHE
            PDBsum:3NHE PDB:2HD5 PDBsum:2HD5 PDB:2IBI PDB:3V6C PDB:3V6E
            PDBsum:2IBI PDBsum:3V6C PDBsum:3V6E HOGENOM:HOG000231498
            HOVERGEN:HBG011164 KO:K11833 MEROPS:C19.013 CTD:9099
            OrthoDB:EOG47M1XH EMBL:AF079564 EMBL:AF440755 EMBL:AK057225
            EMBL:AK292255 EMBL:EF445044 EMBL:AP003396 EMBL:BC002854
            EMBL:BC002955 EMBL:BC041366 IPI:IPI00216783 IPI:IPI00298910
            IPI:IPI00969446 IPI:IPI00969474 RefSeq:NP_001230688.1
            RefSeq:NP_004196.4 RefSeq:NP_741994.1 UniGene:Hs.524085
            ProteinModelPortal:O75604 SMR:O75604 DIP:DIP-29134N IntAct:O75604
            MINT:MINT-4304073 STRING:O75604 PhosphoSite:O75604 PaxDb:O75604
            PRIDE:O75604 DNASU:9099 Ensembl:ENST00000260187
            Ensembl:ENST00000525735 GeneID:9099 KEGG:hsa:9099 UCSC:uc001pwl.4
            UCSC:uc001pwm.4 GeneCards:GC11M119259 HGNC:HGNC:12618 HPA:HPA006777
            HPA:HPA007222 MIM:604725 neXtProt:NX_O75604 PharmGKB:PA37244
            InParanoid:O75604 OMA:SASHRSY PhylomeDB:O75604 ChEMBL:CHEMBL1293227
            ChiTaRS:USP2 EvolutionaryTrace:O75604 GenomeRNAi:9099 NextBio:34107
            ArrayExpress:O75604 Bgee:O75604 CleanEx:HS_USP2
            Genevestigator:O75604 GermOnline:ENSG00000036672 Uniprot:O75604
        Length = 605

 Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
 Identities = 34/104 (32%), Positives = 52/104 (50%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXX 110
             S   D  ++ + +G+ GLRNLGNTCFM++ +Q L     L +Y                 
Sbjct:   252 SPGRDGMNSKSAQGLAGLRNLGNTCFMNSILQCLSNTRELRDYCLQRLYMRDLHHGSNAH 311

Query:   111 XXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                V+EFA L++ +W S    +V PS+FK  +  + P+F  Y Q
Sbjct:   312 TALVEEFAKLIQTIWTSSPNDVVSPSEFKTQIQRYAPRFVGYNQ 355


>UNIPROTKB|A1L506 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5560 KO:K11835
            MEROPS:C19.014 HOVERGEN:HBG000864 OrthoDB:EOG4QRH3H CTD:8237
            GeneTree:ENSGT00670000097750 EMBL:DAAA02073014 EMBL:DAAA02073015
            EMBL:BT029793 IPI:IPI00824936 IPI:IPI00905233 RefSeq:NP_001073777.1
            UniGene:Bt.43412 Ensembl:ENSBTAT00000055593 GeneID:538948
            KEGG:bta:538948 InParanoid:A1L506 NextBio:20877682 Uniprot:A1L506
        Length = 756

 Score = 140 (54.3 bits), Expect = 1.8e-08, P = 1.8e-08
 Identities = 35/106 (33%), Positives = 48/106 (45%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---X 107
             + E+ D      Q G+CGL NLGNTCFM++ +Q L     L EYF               
Sbjct:    89 LEEEEDFQ---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPL 145

Query:   108 XXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   146 GMKGEIAQAYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQ 191


>UNIPROTKB|F1PWM6 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:AAEX03026319
            Ensembl:ENSCAFT00000023833 Uniprot:F1PWM6
        Length = 955

 Score = 141 (54.7 bits), Expect = 1.9e-08, P = 1.9e-08
 Identities = 35/106 (33%), Positives = 49/106 (46%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---X 107
             + E+ D      Q G+CGL NLGNTCFM++ +Q L     L EYF               
Sbjct:   283 LEEEEDFQ---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNHYLEELNFCNPL 339

Query:   108 XXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                    + +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   340 GMKGEIAEAYADLVKQAWSGHHRSIVPHVFKTKVGHFASQFLGYQQ 385


>UNIPROTKB|A5PKF9 [details] [associations]
            symbol:USP11 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
            "nucleus" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 GO:GO:0005634 GO:GO:0005737 GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 HOGENOM:HOG000264375
            MEROPS:C19.014 HOVERGEN:HBG000864 OMA:GICGLTN
            GeneTree:ENSGT00670000097750 EMBL:DAAA02073014 EMBL:DAAA02073015
            IPI:IPI00824936 UniGene:Bt.43412 EMBL:BC142473
            Ensembl:ENSBTAT00000022310 InParanoid:A5PKF9 Uniprot:A5PKF9
        Length = 910

 Score = 140 (54.3 bits), Expect = 2.3e-08, P = 2.3e-08
 Identities = 35/106 (33%), Positives = 48/106 (45%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX---X 107
             + E+ D      Q G+CGL NLGNTCFM++ +Q L     L EYF               
Sbjct:   243 LEEEEDFQ---GQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYFLKNRYLEELNFCNPL 299

Query:   108 XXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      +A LV++ WSG +  + P  FK  +G    QF  Y+Q
Sbjct:   300 GMKGEIAQAYADLVKQAWSGHHRSIVPQVFKTKVGHFASQFLGYQQ 345


>FB|FBgn0031187 [details] [associations]
            symbol:CG14619 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=TAS]
            [GO:0016579 "protein deubiquitination" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0016567 "protein ubiquitination" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 EMBL:AE014298 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 KO:K11833
            GeneTree:ENSGT00670000098024 UniGene:Dm.1945 MEROPS:C19.A24
            GeneID:33132 KEGG:dme:Dmel_CG14619 UCSC:CG14619-RA
            FlyBase:FBgn0031187 GenomeRNAi:33132 NextBio:782065 EMBL:BT003648
            EMBL:BT100212 RefSeq:NP_001245799.1 RefSeq:NP_001245800.1
            RefSeq:NP_728455.1 SMR:Q8IQ27 EnsemblMetazoa:FBtr0077349
            EnsemblMetazoa:FBtr0309238 EnsemblMetazoa:FBtr0309239
            InParanoid:Q8IQ27 Uniprot:Q8IQ27
        Length = 938

 Score = 139 (54.0 bits), Expect = 3.1e-08, P = 3.1e-08
 Identities = 28/89 (31%), Positives = 43/89 (48%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G+CGLRN+GNTCFM++ IQ L     L  +  +                + EFA L+++M
Sbjct:   611 GLCGLRNIGNTCFMNSVIQCLSHTQELTRFLRSHHGSRSLSTKDQQI--LHEFAKLIQEM 668

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+     V P + K+     +  + DY Q
Sbjct:   669 WTANVHTVTPMELKRAFSTKHRMYSDYNQ 697


>MGI|MGI:1934029 [details] [associations]
            symbol:Usp8 "ubiquitin specific peptidase 8" species:10090
            "Mus musculus" [GO:0000281 "cytokinesis after mitosis"
            evidence=ISO] [GO:0001669 "acrosomal vesicle" evidence=IDA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005622 "intracellular" evidence=IDA] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO] [GO:0005768
            "endosome" evidence=IEA] [GO:0005769 "early endosome" evidence=ISO]
            [GO:0005829 "cytosol" evidence=ISO;IDA] [GO:0005886 "plasma
            membrane" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0007032 "endosome organization" evidence=ISO;IMP]
            [GO:0007049 "cell cycle" evidence=IEA] [GO:0007265 "Ras protein
            signal transduction" evidence=IPI] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016579
            "protein deubiquitination" evidence=ISO;IDA;IMP] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0017124 "SH3 domain binding"
            evidence=IEA] [GO:0019897 "extrinsic to plasma membrane"
            evidence=ISO] [GO:0030496 "midbody" evidence=ISO;IDA] [GO:0031313
            "extrinsic to endosome membrane" evidence=IDA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISO] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 Pfam:PF00581 MGI:MGI:1934029 GO:GO:0005829
            GO:GO:0005886 GO:GO:0005634 GO:GO:0007265 GO:GO:0007049
            Gene3D:3.40.250.10 InterPro:IPR001763 SMART:SM00450 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0030496 GO:GO:0007032
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5533 KO:K11839
            GO:GO:0031313 EMBL:AL732330 GeneTree:ENSGT00670000097591
            MEROPS:C19.011 CTD:9101 HOGENOM:HOG000231497 HOVERGEN:HBG012631
            OrthoDB:EOG4XKV6B InterPro:IPR015063 Pfam:PF08969 EMBL:AB045709
            EMBL:AF057146 EMBL:AK122195 EMBL:BC027052 EMBL:BC050947
            EMBL:BC061465 EMBL:BC066126 IPI:IPI00171977 RefSeq:NP_062703.2
            UniGene:Mm.272629 UniGene:Mm.490069 ProteinModelPortal:Q80U87
            SMR:Q80U87 IntAct:Q80U87 MINT:MINT-144852 STRING:Q80U87
            PhosphoSite:Q80U87 PaxDb:Q80U87 PRIDE:Q80U87
            Ensembl:ENSMUST00000028841 GeneID:84092 KEGG:mmu:84092
            UCSC:uc008meb.1 NextBio:350878 Bgee:Q80U87 CleanEx:MM_USP8
            Genevestigator:Q80U87 GermOnline:ENSMUSG00000027363 Uniprot:Q80U87
        Length = 1080

 Score = 139 (54.0 bits), Expect = 3.7e-08, P = 3.7e-08
 Identities = 29/84 (34%), Positives = 43/84 (51%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNX---XXXXXXXXXXXXXXXVDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L  A  L +YF                      +EF ++++ +
Sbjct:   740 GLRNLGNTCYMNSILQCLCNAPHLADYFNRNCYQDDINRSNLLGHKGEVAEEFGIIMKAL 799

Query:   125 WSGQYSIVHPSDFKQILGVHYPQF 148
             W+GQY  + P DFK  +G    QF
Sbjct:   800 WTGQYRYISPKDFKVTIGKINDQF 823


>ZFIN|ZDB-GENE-030131-1949 [details] [associations]
            symbol:usp8 "ubiquitin specific peptidase 8"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 ZFIN:ZDB-GENE-030131-1949
            GO:GO:0008234 Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            PROSITE:PS50206 GO:GO:0006511 GO:GO:0004221
            GeneTree:ENSGT00670000097591 InterPro:IPR015063 Pfam:PF08969
            EMBL:CU928201 IPI:IPI00613650 Ensembl:ENSDART00000093376
            Uniprot:E7F1N3
        Length = 1099

 Score = 129 (50.5 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
 Identities = 27/87 (31%), Positives = 44/87 (50%)

Query:    68 GLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXX---VDEFALLVRKM 124
             GLRNLGNTC+M++ +Q L    A+ +YF                      +EF+++++ +
Sbjct:   766 GLRNLGNTCYMNSILQCLCNTVAMADYFNRNYYQDDINRANILGHKGEVAEEFSVVMKAL 825

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDY 151
             W GQY ++ P DFK  +     +F  Y
Sbjct:   826 WLGQYKMISPLDFKGTICKINSRFSSY 852

 Score = 35 (17.4 bits), Expect = 4.0e-08, Sum P(2) = 4.0e-08
 Identities = 9/38 (23%), Positives = 17/38 (44%)

Query:    28 PPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRG 65
             P   + V  G   F+  +    +   +ND +D C++ G
Sbjct:   529 PAQFNTVITGIAAFSSNMHDR-DAGHNNDGTDQCSRGG 565

 Score = 34 (17.0 bits), Expect = 5.1e-08, Sum P(2) = 5.1e-08
 Identities = 8/19 (42%), Positives = 10/19 (52%)

Query:    21 SFPIP-LPPPTSSDVCEGP 38
             +F  P L  P  + VCE P
Sbjct:   331 NFTYPSLEEPKPASVCEEP 349


>UNIPROTKB|O57429 [details] [associations]
            symbol:USP2 "Ubiquitin carboxyl-terminal hydrolase 2"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0048471 GO:GO:0046872
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 HOVERGEN:HBG011164 MEROPS:C19.013 EMBL:AF016107
            IPI:IPI00577228 UniGene:Gga.454 ProteinModelPortal:O57429
            SMR:O57429 Uniprot:O57429
        Length = 357

 Score = 131 (51.2 bits), Expect = 5.2e-08, P = 5.2e-08
 Identities = 32/92 (34%), Positives = 46/92 (50%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEY-FTNXXXXXXXXXXXXXXXXVDEFALLVR 122
             +G+ GLRNLGNTCFM++ +Q L     L +Y   N                + EFA L++
Sbjct:    16 QGLTGLRNLGNTCFMNSILQCLSNTKELRDYCLQNQYLRDLNNNSRMRTALMSEFAKLIQ 75

Query:   123 KMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              +W S     V PS+FK  +  + P+F  Y Q
Sbjct:    76 LLWTSSPNDSVSPSEFKTQIQRYAPRFVGYNQ 107


>DICTYBASE|DDB_G0293770 [details] [associations]
            symbol:DDB_G0293770 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005575 "cellular_component"
            evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            dictyBase:DDB_G0293770 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AAFI02000219 KO:K11835 RefSeq:XP_628978.1
            ProteinModelPortal:Q54BB6 EnsemblProtists:DDB0237691 GeneID:8629409
            KEGG:ddi:DDB_G0293770 OMA:YTAFALN ProtClustDB:CLSZ2497072
            Uniprot:Q54BB6
        Length = 1085

 Score = 137 (53.3 bits), Expect = 6.0e-08, P = 6.0e-08
 Identities = 32/92 (34%), Positives = 45/92 (48%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVD---EFALLV 121
             G+ GL NLGNTCFM++ +Q L     L +YF +                 D   ++A L+
Sbjct:   336 GITGLGNLGNTCFMNSALQCLSNTYPLTKYFLSKQYENDINKTNPLGCHGDLATDYAELI 395

Query:   122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              ++W G YS V+P  FK  +    PQF  Y Q
Sbjct:   396 TEIWEGTYSSVYPRKFKGQIERFAPQFAGYHQ 427


>WB|WBGene00008547 [details] [associations]
            symbol:F07A11.4 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002893 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS50865 GO:GO:0008270 GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 HSSP:Q93009 eggNOG:COG5560
            GeneTree:ENSGT00670000097750 KO:K11847 EMBL:Z66511 GeneID:174780
            KEGG:cel:CELE_F07A11.4 CTD:174780 PIR:T20528 RefSeq:NP_001254304.1
            ProteinModelPortal:Q19132 MEROPS:C19.A39 PaxDb:Q19132
            EnsemblMetazoa:F07A11.4 UCSC:F07A11.4 WormBase:F07A11.4a
            HOGENOM:HOG000016865 InParanoid:Q19132 OMA:RNDSIFV NextBio:885468
            Uniprot:Q19132
        Length = 1095

 Score = 132 (51.5 bits), Expect = 2.1e-07, P = 2.1e-07
 Identities = 37/132 (28%), Positives = 55/132 (41%)

Query:    26 LPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCA-QRGVCGLRNLGNTCFMSAGIQS 84
             LP   S+ V     + +    +   +  + D    C  ++G  GLRN+GNTCFM+A +Q 
Sbjct:   381 LPRSVSAAVISSASSSSVYKPTAMVLPYEEDREKVCVVEQGYTGLRNIGNTCFMNAVLQM 440

Query:    85 LVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQIL 141
             LV    L EYF                        FA  + +MWSG    + P+  K I+
Sbjct:   441 LVNNIELREYFLRNHYQPEINETNPLGSEGRLAKAFADFMHQMWSGHQKAIEPTQIKNIV 500

Query:   142 GVHYPQFKDYRQ 153
                  QF ++ Q
Sbjct:   501 AEKASQFANFAQ 512


>UNIPROTKB|O94966 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase 19"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016021 "integral to membrane" evidence=IEA]
            [GO:0090068 "positive regulation of cell cycle process"
            evidence=ISS] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=IEP] [GO:0014732 "skeletal muscle atrophy"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:1900037 "regulation of cellular response to hypoxia"
            evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0048642 "negative regulation of skeletal muscle tissue
            development" evidence=ISS] [GO:0030433 "ER-associated protein
            catabolic process" evidence=IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IDA] [GO:0031647 "regulation of protein
            stability" evidence=ISS] [GO:0005789 "endoplasmic reticulum
            membrane" evidence=IDA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
            GO:GO:0031647 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0030433
            GO:GO:1900037 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0034976 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
            PROSITE:PS51203 GO:GO:0048642 GO:GO:0014732 GO:GO:0090068
            eggNOG:COG5560 EMBL:AB020698 EMBL:AK294756 EMBL:AC135506
            EMBL:BC048269 EMBL:BC065909 EMBL:BC082241 EMBL:BC106029
            EMBL:BC142660 EMBL:BC146752 IPI:IPI00016589 IPI:IPI00654743
            IPI:IPI00797161 IPI:IPI00853489 IPI:IPI00927646
            RefSeq:NP_001186089.1 RefSeq:NP_001186090.1 RefSeq:NP_001186091.1
            RefSeq:NP_006668.1 UniGene:Hs.255596 UniGene:Hs.734003 PDB:1WH0
            PDBsum:1WH0 ProteinModelPortal:O94966 SMR:O94966 IntAct:O94966
            MINT:MINT-4658026 STRING:O94966 MEROPS:C19.024 PhosphoSite:O94966
            PaxDb:O94966 PRIDE:O94966 Ensembl:ENST00000398888
            Ensembl:ENST00000417901 Ensembl:ENST00000434032 GeneID:10869
            KEGG:hsa:10869 UCSC:uc003cwb.3 UCSC:uc003cwd.2 CTD:10869
            GeneCards:GC03M049120 HGNC:HGNC:12617 MIM:614471 neXtProt:NX_O94966
            PharmGKB:PA37243 HOGENOM:HOG000074206 HOVERGEN:HBG061889 KO:K11847
            ChiTaRS:USP19 EvolutionaryTrace:O94966 GenomeRNAi:10869
            NextBio:41271 ArrayExpress:O94966 Bgee:O94966 CleanEx:HS_USP19
            Genevestigator:O94966 GermOnline:ENSG00000172046 InterPro:IPR015054
            Pfam:PF08959 Uniprot:O94966
        Length = 1318

 Score = 122 (48.0 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   481 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 540

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   541 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 586

 Score = 35 (17.4 bits), Expect = 3.2e-07, Sum P(2) = 3.2e-07
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query:     2 GIENTWSQDECFSTASAASSFPIPLPPPTSSDVCEGPEN 40
             GI  +  +   F  +S+ S+   P    T    CE P +
Sbjct:    70 GITGSRHRTRLFFPSSSGSA-STPQEEQTKEGACEDPHD 107


>UNIPROTKB|E7EN22 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AC135506
            RefSeq:NP_001186091.1 UniGene:Hs.255596 UniGene:Hs.734003
            GeneID:10869 KEGG:hsa:10869 CTD:10869 HGNC:HGNC:12617 KO:K11847
            ChiTaRS:USP19 GenomeRNAi:10869 NextBio:41271 InterPro:IPR015054
            Pfam:PF08959 IPI:IPI00927399 ProteinModelPortal:E7EN22 SMR:E7EN22
            PRIDE:E7EN22 Ensembl:ENST00000453664 UCSC:uc011bcg.2
            ArrayExpress:E7EN22 Bgee:E7EN22 Uniprot:E7EN22
        Length = 1372

 Score = 122 (48.0 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   572 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 631

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   632 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 677

 Score = 35 (17.4 bits), Expect = 3.5e-07, Sum P(2) = 3.5e-07
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query:     2 GIENTWSQDECFSTASAASSFPIPLPPPTSSDVCEGPEN 40
             GI  +  +   F  +S+ S+   P    T    CE P +
Sbjct:    70 GITGSRHRTRLFFPSSSGSA-STPQEEQTKEGACEDPHD 107


>UNIPROTKB|Q70CQ4 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase 31"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            HSSP:P54578 eggNOG:COG5560 EMBL:AJ586135 EMBL:AK126447
            EMBL:AK126752 EMBL:AB033029 EMBL:BX648357 IPI:IPI00297289
            IPI:IPI00445176 RefSeq:NP_065769.3 UniGene:Hs.183817
            ProteinModelPortal:Q70CQ4 STRING:Q70CQ4 MEROPS:C19.071
            PhosphoSite:Q70CQ4 DMDM:134047944 PaxDb:Q70CQ4 PRIDE:Q70CQ4
            Ensembl:ENST00000219689 GeneID:57478 KEGG:hsa:57478 UCSC:uc002dll.3
            CTD:57478 GeneCards:GC16M022986 H-InvDB:HIX0012889 HGNC:HGNC:20060
            HPA:HPA006937 neXtProt:NX_Q70CQ4 PharmGKB:PA164742780
            HOGENOM:HOG000154758 HOVERGEN:HBG094125 InParanoid:Q70CQ4 KO:K11852
            OMA:SYQEPSD OrthoDB:EOG43TZTQ PhylomeDB:Q70CQ4 ChiTaRS:USP31
            GenomeRNAi:57478 NextBio:63727 Bgee:Q70CQ4 CleanEx:HS_USP31
            Genevestigator:Q70CQ4 GermOnline:ENSG00000103404 Uniprot:Q70CQ4
        Length = 1352

 Score = 102 (41.0 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
 Identities = 30/101 (29%), Positives = 42/101 (41%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXX------------XXXXXXXXXX 112
             GV GLRN GNTCFM+A +Q L       EY                              
Sbjct:   126 GVAGLRNHGNTCFMNATLQCLSNTELFAEYLALGQYRAGRPEPSPDPEQPAGRGAQGQGE 185

Query:   113 XVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
               ++ A LVR +W+ +Y+  H  DFK I+  +  Q++   Q
Sbjct:   186 VTEQLAHLVRALWTLEYTPQHSRDFKTIVSKNALQYRGNSQ 226

 Score = 53 (23.7 bits), Expect = 5.7e-07, Sum P(2) = 5.7e-07
 Identities = 10/21 (47%), Positives = 12/21 (57%)

Query:    12 CFSTASAASSFPIPLPPPTSS 32
             CF    AA+  P P PPP +S
Sbjct:    93 CFPPGPAAAPTPPPCPPPPAS 113


>TAIR|locus:2058490 [details] [associations]
            symbol:UBP5 "ubiquitin-specific protease 5" species:3702
            "Arabidopsis thaliana" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS;IDA] [GO:0005634 "nucleus" evidence=ISM;ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA;TAS] [GO:0000956 "nuclear-transcribed mRNA catabolic
            process" evidence=RCA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0005634 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008234
            GO:GO:0006511 GO:GO:0004221 EMBL:AC002409 eggNOG:COG5560
            HOGENOM:HOG000264375 KO:K11835 EMBL:AF048705 EMBL:AY099701
            EMBL:BT000300 IPI:IPI00536303 PIR:T00757 RefSeq:NP_565944.1
            UniGene:At.12368 ProteinModelPortal:O22207 SMR:O22207 IntAct:O22207
            MEROPS:C19.093 PaxDb:O22207 PRIDE:O22207 EnsemblPlants:AT2G40930.1
            GeneID:818691 KEGG:ath:AT2G40930 GeneFarm:4913 TAIR:At2g40930
            InParanoid:O22207 OMA:ADEYWAN PhylomeDB:O22207
            ProtClustDB:CLSN2688853 Genevestigator:O22207 GermOnline:AT2G40930
            Uniprot:O22207
        Length = 924

 Score = 126 (49.4 bits), Expect = 7.4e-07, P = 7.4e-07
 Identities = 38/115 (33%), Positives = 51/115 (44%)

Query:    44 ELSSLFEIS-EDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXX 102
             E+S  F+ +     V+   +  G+ GL NLGNTCFM++ IQ LV       YF       
Sbjct:   293 EVSQSFDNTYSSTGVTTRGSTAGLTGLLNLGNTCFMNSAIQCLVHTPEFASYFQEDYHQE 352

Query:   103 XXXXXXXXXXXVDEFAL----LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                        V E AL    L+RK+W+   + + P  FK  L    PQF  Y Q
Sbjct:   353 INWQNPLGM--VGELALAFGDLLRKLWAPGRTPIAPRPFKAKLARFAPQFSGYNQ 405


>WB|WBGene00000874 [details] [associations]
            symbol:cyk-3 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0009792 "embryo development ending in birth or egg hatching"
            evidence=IMP] [GO:0006915 "apoptotic process" evidence=IMP]
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 Pfam:PF00443 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            GO:GO:0009792 GO:GO:0006915 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 EMBL:FO081350
            KO:K11837 GeneTree:ENSGT00680000099843 UniGene:Cel.17005
            GeneID:175853 KEGG:cel:CELE_ZK328.1 CTD:175853 NextBio:889976
            RefSeq:NP_001022992.1 ProteinModelPortal:Q8WT44 SMR:Q8WT44
            IntAct:Q8WT44 MINT:MINT-6668483 STRING:Q8WT44 MEROPS:C19.A44
            PRIDE:Q8WT44 EnsemblMetazoa:ZK328.1b UCSC:ZK328.1b
            WormBase:ZK328.1b HOGENOM:HOG000018770 InParanoid:Q8WT44
            OMA:IALANHY ArrayExpress:Q8WT44 Uniprot:Q8WT44
        Length = 1178

 Score = 127 (49.8 bits), Expect = 7.7e-07, P = 7.7e-07
 Identities = 29/110 (26%), Positives = 52/110 (47%)

Query:    44 ELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXX 103
             ++++   +S +  +SD+  + G  GL N GN C+ +AGIQ L   S L +YF +      
Sbjct:   547 QITAASTLSSNAQLSDSSGRPGAVGLVNYGNFCYRNAGIQCLARVSPLTQYFLDEDNLDA 606

Query:   104 XXXXXX----XXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFK 149
                             E+A L+R+MW+ +   + P+DF   + +    F+
Sbjct:   607 IKRGNLRRGDAAETTIEYAKLLREMWAAKKKNIAPNDFNDAIRLSSDMFE 656


>RGD|1303276 [details] [associations]
            symbol:Usp19 "ubiquitin specific peptidase 19" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;ISS] [GO:0005789 "endoplasmic reticulum membrane"
            evidence=ISO;ISS] [GO:0005829 "cytosol" evidence=ISO] [GO:0008270
            "zinc ion binding" evidence=IEA] [GO:0014732 "skeletal muscle
            atrophy" evidence=IEP] [GO:0016021 "integral to membrane"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=IMP]
            [GO:0030433 "ER-associated protein catabolic process"
            evidence=ISO;ISS] [GO:0031647 "regulation of protein stability"
            evidence=IDA] [GO:0034976 "response to endoplasmic reticulum
            stress" evidence=ISO;ISS] [GO:0048642 "negative regulation of
            skeletal muscle tissue development" evidence=ISO;ISS] [GO:0090068
            "positive regulation of cell cycle process" evidence=IMP]
            [GO:1900037 "regulation of cellular response to hypoxia"
            evidence=ISO;ISS] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            RGD:1303276 GO:GO:0016021 GO:GO:0005789 GO:GO:0046872 GO:GO:0008270
            GO:GO:0031647 InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0030433
            GO:GO:1900037 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            GO:GO:0034976 InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969
            PROSITE:PS51203 GO:GO:0048642 GO:GO:0014732 GO:GO:0090068
            MEROPS:C19.024 CTD:10869 HOVERGEN:HBG061889 KO:K11847
            InterPro:IPR015054 Pfam:PF08959 EMBL:AY605065 IPI:IPI00421941
            RefSeq:NP_001001516.1 UniGene:Rn.13484 HSSP:O94966
            ProteinModelPortal:Q6J1Y9 SMR:Q6J1Y9 PhosphoSite:Q6J1Y9
            PRIDE:Q6J1Y9 GeneID:361190 KEGG:rno:361190 NextBio:675485
            Genevestigator:Q6J1Y9 Uniprot:Q6J1Y9
        Length = 1357

 Score = 127 (49.8 bits), Expect = 9.1e-07, P = 9.1e-07
 Identities = 33/106 (31%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + ED +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   520 VEEDEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 579

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   580 GTGGRLAIGFAVLLRALWKGTHQAFQPSKLKAIVASKASQFTGYAQ 625


>MGI|MGI:1918722 [details] [associations]
            symbol:Usp19 "ubiquitin specific peptidase 19" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO;IMP] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
            [GO:0005789 "endoplasmic reticulum membrane" evidence=ISO]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0016020 "membrane" evidence=IEA] [GO:0016021 "integral to
            membrane" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
            [GO:0030433 "ER-associated protein catabolic process" evidence=ISO]
            [GO:0031647 "regulation of protein stability" evidence=ISO]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0048642 "negative
            regulation of skeletal muscle tissue development" evidence=IMP]
            [GO:0090068 "positive regulation of cell cycle process"
            evidence=ISO] [GO:1900037 "regulation of cellular response to
            hypoxia" evidence=ISO] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            MGI:MGI:1918722 GO:GO:0016021 GO:GO:0005829 GO:GO:0005789
            GO:GO:0046872 GO:GO:0008270 GO:GO:0031647 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0030433 GO:GO:1900037 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0034976 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 GO:GO:0048642
            GO:GO:0014732 GO:GO:0090068 HSSP:P40818 eggNOG:COG5560
            GeneTree:ENSGT00670000097750 MEROPS:C19.024 CTD:10869
            HOGENOM:HOG000074206 HOVERGEN:HBG061889 KO:K11847 ChiTaRS:USP19
            InterPro:IPR015054 Pfam:PF08959 EMBL:AK122396 EMBL:AK146504
            EMBL:AK160807 EMBL:AK171942 EMBL:BC046824 EMBL:BC060613
            IPI:IPI00420483 IPI:IPI00457619 RefSeq:NP_001161843.1
            RefSeq:NP_001161844.1 RefSeq:NP_001161845.1 RefSeq:NP_082080.3
            RefSeq:NP_663382.2 UniGene:Mm.289706 ProteinModelPortal:Q3UJD6
            SMR:Q3UJD6 STRING:Q3UJD6 PhosphoSite:Q3UJD6 PaxDb:Q3UJD6
            PRIDE:Q3UJD6 Ensembl:ENSMUST00000006854 Ensembl:ENSMUST00000085044
            GeneID:71472 KEGG:mmu:71472 UCSC:uc009rpt.2 UCSC:uc009rpu.2
            OMA:PQCKQHR OrthoDB:EOG4NVZJG NextBio:333851 Bgee:Q3UJD6
            CleanEx:MM_USP19 Genevestigator:Q3UJD6 Uniprot:Q3UJD6
        Length = 1360

 Score = 127 (49.8 bits), Expect = 9.1e-07, P = 9.1e-07
 Identities = 33/106 (31%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + ED +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   523 VEEDEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 582

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   583 GTGGRLAIGFAVLLRALWKGTHQAFQPSKLKAIVASKASQFTGYAQ 628


>UNIPROTKB|E9PP86 [details] [associations]
            symbol:USP50 "Inactive ubiquitin carboxyl-terminal
            hydrolase 50" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            IPI:IPI00940487 UniGene:Hs.677758 HGNC:HGNC:20079 NextBio:100122
            CTD:373509 OMA:HFQGVTG EMBL:AC012170 RefSeq:NP_987090.2
            ProteinModelPortal:E9PP86 SMR:E9PP86 DNASU:373509
            Ensembl:ENST00000532404 GeneID:373509 KEGG:hsa:373509
            UCSC:uc021sky.1 GenomeRNAi:373509 ArrayExpress:E9PP86 Bgee:E9PP86
            Uniprot:E9PP86
        Length = 334

 Score = 118 (46.6 bits), Expect = 1.2e-06, P = 1.2e-06
 Identities = 32/85 (37%), Positives = 37/85 (43%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRK 123
             +GV GL NLGNTC ++A  Q L +   LVEYF                     FA L+  
Sbjct:    41 QGVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQNDCSEVATA--FAYLMTD 98

Query:   124 MWSGQYSIVHPSDFKQILGVHYPQF 148
             MW G    V P  F   LG  YP F
Sbjct:    99 MWLGDSDCVSPEIFWSALGNLYPAF 123


>ZFIN|ZDB-GENE-030131-3055 [details] [associations]
            symbol:usp19 "ubiquitin specific peptidase 19"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0021551 "central nervous system
            morphogenesis" evidence=IMP] [GO:0016787 "hydrolase activity"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            ZFIN:ZDB-GENE-030131-3055 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            InterPro:IPR008978 SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            eggNOG:COG5560 GeneTree:ENSGT00670000097750 HOGENOM:HOG000074206
            HOVERGEN:HBG061889 InterPro:IPR015054 Pfam:PF08959 OMA:PQCKQHR
            OrthoDB:EOG4NVZJG EMBL:AL953864 IPI:IPI00490903
            Ensembl:ENSDART00000147778 Uniprot:B7ZDA8
        Length = 1478

 Score = 124 (48.7 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 36/107 (33%), Positives = 47/107 (43%)

Query:    50 EISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX- 108
             E SE+ +    C   G  GL NLGNTCFM++ IQSL     L +YF +            
Sbjct:   622 ERSEEVEEKKVC-HPGFTGLVNLGNTCFMNSVIQSLSNTRELRDYFHDRGFESEINCNNP 680

Query:   109 --XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                       FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   681 LGTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 727


>POMBASE|SPCC1494.05c [details] [associations]
            symbol:ubp12 "CSN-associated deubiquitinating enzyme
            Ubp12" species:4896 "Schizosaccharomyces pombe" [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISM] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005634
            "nucleus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
            [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 PomBase:SPCC1494.05c
            GO:GO:0005829 GO:GO:0005634 EMBL:CU329672 GenomeReviews:CU329672_GR
            GO:GO:0006511 GO:GO:0004843 GO:GO:0016579 GO:GO:0004221
            eggNOG:COG5560 KO:K11835 PIR:T41006 RefSeq:NP_588530.1
            ProteinModelPortal:O60079 STRING:O60079 MEROPS:C19.A64
            EnsemblFungi:SPCC1494.05c.1 GeneID:2538990 KEGG:spo:SPCC1494.05c
            OMA:HERVENK OrthoDB:EOG4FR40X NextBio:20800165 Uniprot:O60079
        Length = 979

 Score = 122 (48.0 bits), Expect = 2.1e-06, P = 2.1e-06
 Identities = 34/114 (29%), Positives = 51/114 (44%)

Query:    49 FEISEDNDVSDNCAQR------GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXX 102
             F I + N+ S N  Q+      G CGL NLGNTC+M++ +Q L     L ++FT+     
Sbjct:   287 FLIQQRNNQSSNEEQKQEKRVPGTCGLSNLGNTCYMNSALQCLTHTRELRDFFTSDEWKN 346

Query:   103 XXXXXX---XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                              FA L++ ++S ++S   P  FK  +G     F  Y Q
Sbjct:   347 QVNESNPLGMGGQVASIFASLIKSLYSPEHSSFAPRQFKATIGKFNHSFLGYGQ 400


>UNIPROTKB|E7ESU0 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            PROSITE:PS51203 EMBL:AC135506 HGNC:HGNC:12617 ChiTaRS:USP19
            InterPro:IPR015054 Pfam:PF08959 IPI:IPI01010013
            ProteinModelPortal:E7ESU0 SMR:E7ESU0 Ensembl:ENST00000398896
            UCSC:uc003cwa.3 ArrayExpress:E7ESU0 Bgee:E7ESU0 Uniprot:E7ESU0
        Length = 1089

 Score = 122 (48.0 bits), Expect = 2.4e-06, P = 2.4e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   289 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 348

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   349 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 394


>UNIPROTKB|E2R1W4 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GeneTree:ENSGT00670000097750 InterPro:IPR015054 Pfam:PF08959
            EMBL:AAEX03012231 Ensembl:ENSCAFT00000018474 Uniprot:E2R1W4
        Length = 1315

 Score = 122 (48.0 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   478 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPL 537

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   538 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 583


>UNIPROTKB|E7EST9 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AC135506
            HGNC:HGNC:12617 ChiTaRS:USP19 InterPro:IPR015054 Pfam:PF08959
            IPI:IPI00796756 ProteinModelPortal:E7EST9 SMR:E7EST9
            Ensembl:ENST00000398898 ArrayExpress:E7EST9 Bgee:E7EST9
            Uniprot:E7EST9
        Length = 1321

 Score = 122 (48.0 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   521 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 580

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   581 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 626


>UNIPROTKB|J9NU38 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GeneTree:ENSGT00670000097750 InterPro:IPR015054 Pfam:PF08959
            EMBL:AAEX03012231 Ensembl:ENSCAFT00000043874 Uniprot:J9NU38
        Length = 1334

 Score = 122 (48.0 bits), Expect = 3.0e-06, P = 3.0e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   523 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPL 582

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   583 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 628


>UNIPROTKB|B5MEG5 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203 EMBL:AC135506
            HGNC:HGNC:12617 HOGENOM:HOG000074206 HOVERGEN:HBG061889
            ChiTaRS:USP19 InterPro:IPR015054 Pfam:PF08959 IPI:IPI00789672
            ProteinModelPortal:B5MEG5 SMR:B5MEG5 STRING:B5MEG5 PRIDE:B5MEG5
            Ensembl:ENST00000398892 UCSC:uc003cwc.2 ArrayExpress:B5MEG5
            Bgee:B5MEG5 Uniprot:B5MEG5
        Length = 1358

 Score = 122 (48.0 bits), Expect = 3.1e-06, P = 3.1e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   521 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 580

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   581 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 626


>UNIPROTKB|F1SKI2 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0048642 "negative regulation of
            skeletal muscle tissue development" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
            Pfam:PF08959 OMA:PQCKQHR EMBL:CU856115 Ensembl:ENSSSCT00000012453
            Uniprot:F1SKI2
        Length = 1424

 Score = 122 (48.0 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   624 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 683

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   684 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 729


>UNIPROTKB|F1MUD4 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0048642 "negative regulation of
            skeletal muscle tissue development" evidence=IEA] [GO:0005829
            "cytosol" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0005829 GO:GO:0046872 GO:GO:0008270 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            InterPro:IPR007052 InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GO:GO:0048642 GeneTree:ENSGT00670000097750 InterPro:IPR015054
            Pfam:PF08959 OMA:PQCKQHR EMBL:DAAA02054428 IPI:IPI00725491
            Ensembl:ENSBTAT00000025198 Uniprot:F1MUD4
        Length = 1436

 Score = 122 (48.0 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   636 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFEAEINYNNPL 695

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   696 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 741


>UNIPROTKB|F1PF24 [details] [associations]
            symbol:USP19 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002893
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF01753 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS01360 PROSITE:PS50235 PROSITE:PS50865
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 InterPro:IPR008978
            SUPFAM:SSF49764 GO:GO:0006511 GO:GO:0004221 InterPro:IPR007052
            InterPro:IPR017447 Pfam:PF04969 PROSITE:PS51203
            GeneTree:ENSGT00670000097750 InterPro:IPR015054 Pfam:PF08959
            OMA:PQCKQHR EMBL:AAEX03012231 Ensembl:ENSCAFT00000018484
            Uniprot:F1PF24
        Length = 1447

 Score = 122 (48.0 bits), Expect = 3.3e-06, P = 3.3e-06
 Identities = 32/106 (30%), Positives = 45/106 (42%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             + E+ +        G  GL NLGNTCFM++ IQSL     L ++F +             
Sbjct:   647 VEEEEEEEKKVCLPGFTGLVNLGNTCFMNSVIQSLSNTRELRDFFHDRSFETEINYNNPL 706

Query:   109 -XXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      FA+L+R +W G +    PS  K I+     QF  Y Q
Sbjct:   707 GTGGRLAIGFAVLLRALWKGTHHAFQPSKLKAIVASKASQFTGYAQ 752


>UNIPROTKB|K7GQH3 [details] [associations]
            symbol:USP11 "Uncharacterized protein" species:9823 "Sus
            scrofa" [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443
            PROSITE:PS00972 GeneTree:ENSGT00670000097750 EMBL:FP710256
            Ensembl:ENSSSCT00000033737 Uniprot:K7GQH3
        Length = 89

 Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
 Identities = 21/44 (47%), Positives = 26/44 (59%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYF 95
             S   +  D   Q G+CGL NLGNTCFM++ +Q L     L EYF
Sbjct:    20 SATEEEEDFQGQPGICGLTNLGNTCFMNSALQCLSNVPQLTEYF 63


>TAIR|locus:505006627 [details] [associations]
            symbol:UBP8 "ubiquitin-specific protease 8"
            species:3702 "Arabidopsis thaliana" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=ISS] [GO:0005634
            "nucleus" evidence=ISM] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 EMBL:CP002688
            GenomeReviews:BA000015_GR GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            EMBL:AL589883 HSSP:P54578 eggNOG:COG5560 KO:K11835 EMBL:AK226691
            EMBL:AF302662 IPI:IPI00547490 IPI:IPI01019477 RefSeq:NP_568411.4
            RefSeq:NP_851052.4 UniGene:At.23027 ProteinModelPortal:Q9C585
            SMR:Q9C585 MEROPS:C19.A01 PaxDb:Q9C585 PRIDE:Q9C585 GeneID:832263
            KEGG:ath:AT5G22030 TAIR:At5g22030 InParanoid:Q9C585
            PhylomeDB:Q9C585 Genevestigator:Q9C585 Uniprot:Q9C585
        Length = 871

 Score = 119 (46.9 bits), Expect = 3.8e-06, P = 3.8e-06
 Identities = 30/91 (32%), Positives = 41/91 (45%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFAL--LVR 122
             G+ GL+NLGNTCFM++ +Q L     LV++F                      A   L+R
Sbjct:   277 GLTGLQNLGNTCFMNSSLQCLAHTPKLVDFFLGEYSKEINLDNPLGMKGEIALAFGDLLR 336

Query:   123 KMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              +W+   S V P  FK  L    PQF  + Q
Sbjct:   337 SLWAPGASTVAPRTFKAKLARFAPQFSGFNQ 367


>UNIPROTKB|Q70EL3 [details] [associations]
            symbol:USP50 "Inactive ubiquitin carboxyl-terminal
            hydrolase 50" species:9606 "Homo sapiens" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221
            eggNOG:COG5533 HSSP:P54578 HOGENOM:HOG000231498 EMBL:AJ583818
            EMBL:BN000339 IPI:IPI00940487 UniGene:Hs.677758
            ProteinModelPortal:Q70EL3 SMR:Q70EL3 IntAct:Q70EL3 STRING:Q70EL3
            MEROPS:C19.058 PhosphoSite:Q70EL3 DMDM:74723115 PaxDb:Q70EL3
            PRIDE:Q70EL3 UCSC:uc021skx.1 GeneCards:GC15M050792
            H-InvDB:HIX0038100 HGNC:HGNC:20079 HPA:HPA039470 neXtProt:NX_Q70EL3
            HOVERGEN:HBG098592 InParanoid:Q70EL3 OrthoDB:EOG4JM7PX
            NextBio:100122 CleanEx:HS_USP50 Genevestigator:Q70EL3
            Uniprot:Q70EL3
        Length = 339

 Score = 113 (44.8 bits), Expect = 4.3e-06, P = 4.3e-06
 Identities = 32/88 (36%), Positives = 37/88 (42%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXX---XXXXXXVDEFALL 120
             +GV GL NLGNTC ++A  Q L +   LVEYF                        FA L
Sbjct:    41 QGVTGLWNLGNTCCVNAISQCLCSILPLVEYFLTGKYITALQKFLLPSDCSEVATAFAYL 100

Query:   121 VRKMWSGQYSIVHPSDFKQILGVHYPQF 148
             +  MW G    V P  F   LG  YP F
Sbjct:   101 MTDMWLGDSDCVSPEIFWSALGNLYPAF 128


>WB|WBGene00008441 [details] [associations]
            symbol:E01B7.1 species:6239 "Caenorhabditis elegans"
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0040010 "positive regulation of growth rate"
            evidence=IMP] [GO:0040018 "positive regulation of multicellular
            organism growth" evidence=IMP] [GO:0040011 "locomotion"
            evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
            "nematode larval development" evidence=IMP] [GO:0010171 "body
            morphogenesis" evidence=IMP] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235 GO:GO:0040007
            GO:GO:0040010 GO:GO:0002119 GO:GO:0010171 GO:GO:0040011
            GO:GO:0040018 Gene3D:3.40.250.10 InterPro:IPR001763 SUPFAM:SSF52821
            GO:GO:0006511 GO:GO:0004221 EMBL:AL132898 KO:K11839
            GeneTree:ENSGT00670000097591 EMBL:Z83222 RefSeq:NP_507513.2
            ProteinModelPortal:G5EBW2 SMR:G5EBW2 EnsemblMetazoa:E01B7.1
            GeneID:180175 KEGG:cel:CELE_E01B7.1 CTD:180175 WormBase:E01B7.1
            OMA:PSLAYIL NextBio:908320 Uniprot:G5EBW2
        Length = 811

 Score = 117 (46.2 bits), Expect = 5.8e-06, P = 5.8e-06
 Identities = 32/111 (28%), Positives = 47/111 (42%)

Query:    47 SLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX 106
             ++  + +D+  +      G  GL N+GNTCFMSA +Q L     L E FT          
Sbjct:   458 AIHRVVDDSTRNKGRGVPGAVGLFNMGNTCFMSATLQCLFQTPGLAEVFTKKVFVSKVNT 517

Query:   107 XXXXXXX--VDE-FALLVRKMWSGQYSIVHPSDFKQILG-VHYPQFKDYRQ 153
                      +   FA L   +W+G ++ + PS F Q+     Y    D RQ
Sbjct:   518 QSRLGSKGVISAGFASLSDMIWNGTFTAIRPSRFLQLFSDTVYQPLSDGRQ 568


>UNIPROTKB|F1NZV6 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
            InterPro:IPR001125 InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13202 PRINTS:PR00450
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 GO:GO:0004221 OMA:SDNNNQC
            GeneTree:ENSGT00680000099843 EMBL:AADN02025765 IPI:IPI00580446
            Ensembl:ENSGALT00000008580 Uniprot:F1NZV6
        Length = 1601

 Score = 108 (43.1 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 25/94 (26%), Positives = 42/94 (44%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L  YF +                      +  
Sbjct:   719 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTRYFISGRHLYELNRTNPIGMKGHMAKCYGD 778

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    + P   +  +  + P+F  ++Q
Sbjct:   779 LVQELWSGTQKNIAPLKLRWTIAKYAPRFNGFQQ 812

 Score = 36 (17.7 bits), Expect = 1.1e-05, Sum P(2) = 1.1e-05
 Identities = 9/31 (29%), Positives = 15/31 (48%)

Query:    14 STASAASSFPIPLPPPTSSDVCEGPENFTGE 44
             S AS  +S  +  P    +DVC   ++ T +
Sbjct:   453 SEASETTSSNVLYPSTPGTDVCFARQHNTSD 483


>RGD|2303824 [details] [associations]
            symbol:Usp43 "ubiquitin specific peptidase 43" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR018200
            Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            RGD:2303824 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            IPI:IPI00951601 Ensembl:ENSRNOT00000065911 UCSC:RGD:2303824
            ArrayExpress:F1M3F6 Uniprot:F1M3F6
        Length = 1113

 Score = 115 (45.5 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 38/129 (29%), Positives = 55/129 (42%)

Query:    25 PLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQS 84
             P P P SS    GP+     L S  +IS      D     G  GL+N GNTCFM+A +Q 
Sbjct:    48 PGPAPASSG-SPGPDR---PLGSQPQISS----GDGARPPGAQGLKNHGNTCFMNAVVQC 99

Query:    85 LVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVH 144
             L     L E+                    ++ A LVR +W+ +Y+    ++FK  +  +
Sbjct:   100 LSNTDLLAEFLA----LGRYRAVPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKY 155

Query:   145 YPQFKDYRQ 153
               QF+   Q
Sbjct:   156 GSQFQGNSQ 164


>UNIPROTKB|F1M2M9 [details] [associations]
            symbol:Usp43_predicted "Protein Usp43_predicted"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004221 IPI:IPI00845884
            Ensembl:ENSRNOT00000004963 ArrayExpress:F1M2M9 Uniprot:F1M2M9
        Length = 1113

 Score = 115 (45.5 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 38/129 (29%), Positives = 55/129 (42%)

Query:    25 PLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQS 84
             P P P SS    GP+     L S  +IS      D     G  GL+N GNTCFM+A +Q 
Sbjct:    48 PGPAPASSG-SPGPDR---PLGSQPQISS----GDGARPPGAQGLKNHGNTCFMNAVVQC 99

Query:    85 LVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVH 144
             L     L E+                    ++ A LVR +W+ +Y+    ++FK  +  +
Sbjct:   100 LSNTDLLAEFLA----LGRYRAVPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKY 155

Query:   145 YPQFKDYRQ 153
               QF+   Q
Sbjct:   156 GSQFQGNSQ 164


>UNIPROTKB|F1LZN0 [details] [associations]
            symbol:Usp43_predicted "Ubiquitin carboxyl-terminal
            hydrolase" species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 IPI:IPI00952243 Ensembl:ENSRNOT00000066429
            ArrayExpress:F1LZN0 Uniprot:F1LZN0
        Length = 1118

 Score = 115 (45.5 bits), Expect = 1.4e-05, P = 1.4e-05
 Identities = 38/129 (29%), Positives = 55/129 (42%)

Query:    25 PLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQS 84
             P P P SS    GP+     L S  +IS      D     G  GL+N GNTCFM+A +Q 
Sbjct:    48 PGPAPASSG-SPGPDR---PLGSQPQISS----GDGARPPGAQGLKNHGNTCFMNAVVQC 99

Query:    85 LVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVH 144
             L     L E+                    ++ A LVR +W+ +Y+    ++FK  +  +
Sbjct:   100 LSNTDLLAEFLA----LGRYRAVPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKY 155

Query:   145 YPQFKDYRQ 153
               QF+   Q
Sbjct:   156 GSQFQGNSQ 164


>DICTYBASE|DDB_G0268872 [details] [associations]
            symbol:DDB_G0268872 "putative ubiquitin
            carboxyl-terminal hydrolase (UCH)" species:44689 "Dictyostelium
            discoideum" [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0046872 "metal ion binding" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 dictyBase:DDB_G0268872 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 EMBL:AAFI02000004 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 eggNOG:COG5560
            RefSeq:XP_647029.1 ProteinModelPortal:Q55EJ1
            EnsemblProtists:DDB0237744 GeneID:8616724 KEGG:ddi:DDB_G0268872
            Uniprot:Q55EJ1
        Length = 2125

 Score = 88 (36.0 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
 Identities = 24/61 (39%), Positives = 33/61 (54%)

Query:    36 EGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYF 95
             +G  N++   S L      + +  N    GV GLRNLGNTCFM+  +QSL   S + E+ 
Sbjct:  1317 KGKRNYSS--SYLMSKVASSPIKKNKLIPGVTGLRNLGNTCFMNTILQSL---SNIAEFR 1371

Query:    96 T 96
             T
Sbjct:  1372 T 1372

 Score = 79 (32.9 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
 Identities = 14/34 (41%), Positives = 24/34 (70%)

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             L R +WSG++S+V PS   + +  + P+FK+Y+Q
Sbjct:  1513 LFRLLWSGKWSVVTPSSLLESVWRNIPKFKNYQQ 1546

 Score = 35 (17.4 bits), Expect = 1.9e-05, Sum P(3) = 1.9e-05
 Identities = 6/8 (75%), Positives = 7/8 (87%)

Query:    25 PLPPPTSS 32
             P+P PTSS
Sbjct:   778 PIPTPTSS 785


>UNIPROTKB|P35125 [details] [associations]
            symbol:USP6 "Ubiquitin carboxyl-terminal hydrolase 6"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005097 "Rab GTPase activator activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006464 "cellular protein modification
            process" evidence=NAS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=TAS] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005886 "plasma membrane" evidence=IDA] [GO:0005737 "cytoplasm"
            evidence=IDA] [GO:0060627 "regulation of vesicle-mediated
            transport" evidence=IDA] [GO:0055037 "recycling endosome"
            evidence=IDA] [GO:0005516 "calmodulin binding" evidence=IPI]
            [GO:0003676 "nucleic acid binding" evidence=TAS] [GO:0005764
            "lysosome" evidence=TAS] InterPro:IPR000195 InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF00566 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50086 PROSITE:PS50235 SMART:SM00164
            GO:GO:0005886 GO:GO:0060627 GO:GO:0003676 GO:GO:0005764
            GO:GO:0055037 Pathway_Interaction_DB:arf6cyclingpathway
            GO:GO:0006511 eggNOG:COG5210 GO:GO:0004197 GO:GO:0004843
            GO:GO:0016579 GO:GO:0004221 GO:GO:0005097 GO:GO:0032851
            SUPFAM:SSF47923 KO:K11837 EMBL:X63546 EMBL:X63547 EMBL:AY143550
            EMBL:AY163314 IPI:IPI00423562 IPI:IPI00423563 IPI:IPI00423565
            PIR:S57867 PIR:S57868 PIR:S57874 RefSeq:NP_004496.2
            UniGene:Hs.448851 ProteinModelPortal:P35125 SMR:P35125
            IntAct:P35125 MINT:MINT-2865848 STRING:P35125 MEROPS:C19.009
            PhosphoSite:P35125 DMDM:50403738 PaxDb:P35125 PRIDE:P35125
            DNASU:9098 Ensembl:ENST00000250066 Ensembl:ENST00000304328
            Ensembl:ENST00000332776 Ensembl:ENST00000572949
            Ensembl:ENST00000574788 GeneID:9098 KEGG:hsa:9098 UCSC:uc002gau.1
            UCSC:uc010ckz.1 CTD:9098 GeneCards:GC17P005019 H-InvDB:HIX0202554
            HGNC:HGNC:12629 HPA:HPA011742 MIM:604334 neXtProt:NX_P35125
            PharmGKB:PA37254 HOGENOM:HOG000154762 InParanoid:P35125 OMA:LAEVHDS
            OrthoDB:EOG469QSX PhylomeDB:P35125 ChiTaRS:USP6 GenomeRNAi:9098
            NextBio:34099 ArrayExpress:P35125 Bgee:P35125 CleanEx:HS_USP6
            Genevestigator:P35125 GermOnline:ENSG00000129204 Uniprot:P35125
        Length = 1406

 Score = 114 (45.2 bits), Expect = 2.3e-05, P = 2.3e-05
 Identities = 26/94 (27%), Positives = 44/94 (46%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   528 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 587

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   ++ +  + P+F  ++Q
Sbjct:   588 LVQELWSGTQKSVAPLKLRRTIAKYAPKFDGFQQ 621


>UNIPROTKB|F1LRS9 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0046872 GO:GO:0008270 GO:GO:0008234
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221
            IPI:IPI01016284 Ensembl:ENSRNOT00000016290 ArrayExpress:F1LRS9
            Uniprot:F1LRS9
        Length = 839

 Score = 111 (44.1 bits), Expect = 2.6e-05, P = 2.6e-05
 Identities = 35/122 (28%), Positives = 57/122 (46%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T   + L  + ED D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   134 PSN-TALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 192

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   193 FFLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPANLFQGIKTVN-PTFRGY 248

Query:   152 RQ 153
              Q
Sbjct:   249 SQ 250


>UNIPROTKB|K7EKZ1 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase 32"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] InterPro:IPR001125 InterPro:IPR001394
            InterPro:IPR002048 InterPro:IPR006615 InterPro:IPR011992
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 Pfam:PF13202
            PRINTS:PR00450 PROSITE:PS00972 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            Gene3D:1.10.238.10 InterPro:IPR018247 HGNC:HGNC:19143 EMBL:AC025048
            EMBL:AC003962 EMBL:AC037475 EMBL:AC104763 Ensembl:ENST00000590133
            Uniprot:K7EKZ1
        Length = 847

 Score = 111 (44.1 bits), Expect = 2.7e-05, P = 2.7e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   727 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 786

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   +  +  + P+F  ++Q
Sbjct:   787 LVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 820


>MGI|MGI:2159711 [details] [associations]
            symbol:Usp33 "ubiquitin specific peptidase 33" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISA] [GO:0005515 "protein binding" evidence=IPI]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IMP] [GO:0008152 "metabolic
            process" evidence=ISA] [GO:0008233 "peptidase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=ISO]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISO] [GO:0016477 "cell migration"
            evidence=IMP] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0044297 "cell
            body" evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISO]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISO]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 MGI:MGI:2159711 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 HSSP:Q93009
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:AF383174 EMBL:BC005506 EMBL:BC031366
            EMBL:BC089315 EMBL:AK143844 IPI:IPI00319995 IPI:IPI00798461
            RefSeq:NP_001239415.1 RefSeq:NP_573510.2 UniGene:Mm.258320
            ProteinModelPortal:Q8R5K2 SMR:Q8R5K2 STRING:Q8R5K2
            PhosphoSite:Q8R5K2 PaxDb:Q8R5K2 PRIDE:Q8R5K2 DNASU:170822
            Ensembl:ENSMUST00000026507 Ensembl:ENSMUST00000117492 GeneID:170822
            KEGG:mmu:170822 UCSC:uc008rti.1 UCSC:uc008rtj.1 InParanoid:Q8R5K2
            NextBio:370477 Bgee:Q8R5K2 Genevestigator:Q8R5K2 Uniprot:Q8R5K2
        Length = 909

 Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 32/109 (29%), Positives = 53/109 (48%)

Query:    51 ISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX 106
             +SED D+     D    RG+ GL+N+GNTC+M+A +Q+L     L ++F +         
Sbjct:   134 VSEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLDCGGLARTDK 193

Query:   107 XXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                       +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y Q
Sbjct:   194 KPAI---CKSYLKLMTELWHKSRPGSVVPANLFQGIKTVN-PTFRGYSQ 238


>UNIPROTKB|F1LPJ7 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00690000101718 OMA:TMEEDKS
            IPI:IPI00369811 Ensembl:ENSRNOT00000066125 ArrayExpress:F1LPJ7
            Uniprot:F1LPJ7
        Length = 909

 Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 35/122 (28%), Positives = 57/122 (46%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T   + L  + ED D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   121 PSN-TALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 179

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   180 FFLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPANLFQGIKTVN-PTFRGY 235

Query:   152 RQ 153
              Q
Sbjct:   236 SQ 237


>UNIPROTKB|F1LRN2 [details] [associations]
            symbol:Usp33 "Ubiquitin carboxyl-terminal hydrolase"
            species:10116 "Rattus norvegicus" [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA] [GO:0016477 "cell
            migration" evidence=IEA] [GO:0044297 "cell body" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0044297 GO:GO:0004221 IPI:IPI00949514
            Ensembl:ENSRNOT00000016022 ArrayExpress:F1LRN2 Uniprot:F1LRN2
        Length = 919

 Score = 111 (44.1 bits), Expect = 2.9e-05, P = 2.9e-05
 Identities = 35/122 (28%), Positives = 57/122 (46%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T   + L  + ED D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   139 PSN-TALKTPLVAVFEDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 197

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   198 FFLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPANLFQGIKTVN-PTFRGY 253

Query:   152 RQ 153
              Q
Sbjct:   254 SQ 255


>UNIPROTKB|F1NW53 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:SYQEPSD GeneTree:ENSGT00680000099843 EMBL:AADN02023614
            IPI:IPI00597852 Ensembl:ENSGALT00000010155 Uniprot:F1NW53
        Length = 1310

 Score = 112 (44.5 bits), Expect = 3.5e-05, P = 3.5e-05
 Identities = 29/92 (31%), Positives = 42/92 (45%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFALLV 121
             GV GLRN GNTCFM+A +Q L       E+                       ++ A LV
Sbjct:   101 GVAGLRNHGNTCFMNAILQCLSNTELFAEFLALEQFRGPAEPGPPPPAPGEVTEQLAQLV 160

Query:   122 RKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             R +W+ +Y+  H  DFK I+  +  Q++   Q
Sbjct:   161 RALWTLEYTPQHSRDFKNIVSKNAMQYRGNAQ 192


>MGI|MGI:2444541 [details] [associations]
            symbol:Usp43 "ubiquitin specific peptidase 43" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0006508 "proteolysis" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0016787
            "hydrolase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:2444541 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 HSSP:P40818 eggNOG:COG5560 CTD:124739
            HOGENOM:HOG000293426 HOVERGEN:HBG094126 KO:K11856 OMA:RSISMKA
            OrthoDB:EOG4DR9BH EMBL:AL732570 EMBL:AK083271 EMBL:BC021474
            IPI:IPI00225521 IPI:IPI00788336 RefSeq:NP_776115.2
            UniGene:Mm.158885 ProteinModelPortal:Q8BUM9 MEROPS:C19.979
            PhosphoSite:Q8BUM9 PRIDE:Q8BUM9 Ensembl:ENSMUST00000021288
            GeneID:216835 KEGG:mmu:216835 UCSC:uc007jne.1
            GeneTree:ENSGT00680000099843 InParanoid:Q8BUM9 NextBio:375380
            Bgee:Q8BUM9 CleanEx:MM_USP43 Genevestigator:Q8BUM9
            GermOnline:ENSMUSG00000020905 Uniprot:Q8BUM9
        Length = 1132

 Score = 111 (44.1 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 37/129 (28%), Positives = 55/129 (42%)

Query:    25 PLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQS 84
             P P P S+    GP+   G   S  +IS      D     G  GL+N GNTCFM+A +Q 
Sbjct:    67 PGPAPASAG-SPGPDRPPG---SQPQISS----GDGARPPGAQGLKNHGNTCFMNAVVQC 118

Query:    85 LVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQYSIVHPSDFKQILGVH 144
             L     L E+                    ++ A LVR +W+ +Y+    ++FK  +  +
Sbjct:   119 LSNTDLLAEFLA----LGRYRAAPGRAEVTEQLAALVRALWTREYTPQLSAEFKNAVSKY 174

Query:   145 YPQFKDYRQ 153
               QF+   Q
Sbjct:   175 GSQFQGNSQ 183


>ZFIN|ZDB-GENE-100211-1 [details] [associations]
            symbol:usp43a "ubiquitin specific peptidase 43a"
            species:7955 "Danio rerio" [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0016787 "hydrolase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 ZFIN:ZDB-GENE-100211-1 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 GeneTree:ENSGT00680000099843 EMBL:AL929281
            EMBL:CR933785 EMBL:CU929170 IPI:IPI00852216
            Ensembl:ENSDART00000085669 Uniprot:F1Q8C6
        Length = 1154

 Score = 111 (44.1 bits), Expect = 3.8e-05, P = 3.8e-05
 Identities = 33/98 (33%), Positives = 43/98 (43%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYF--------TNXXXXXXXXXXXXXXXXV-D 115
             GV GL+N GNTCFM+A +Q L     L EY          N                V D
Sbjct:   112 GVQGLKNHGNTCFMNAVVQCLSNTELLAEYLGLEQYKYELNERRINGMMKSEEVRGEVTD 171

Query:   116 EFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             + A LVR +W+  Y+     DFK ++  +  QFK   Q
Sbjct:   172 KLASLVRALWTNDYTPQLSVDFKSVVAKYGSQFKGNAQ 209


>UNIPROTKB|Q8TEY7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9606 "Homo sapiens" [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0030891 "VCB complex"
            evidence=TAS] [GO:0005737 "cytoplasm" evidence=TAS] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=TAS]
            [GO:0005515 "protein binding" evidence=IPI] [GO:0016579 "protein
            deubiquitination" evidence=IDA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=TAS] [GO:0043130 "ubiquitin binding"
            evidence=IDA] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=IMP] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IDA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IDA] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=IMP] [GO:0008270 "zinc ion
            binding" evidence=IDA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IDA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0007411 "axon guidance" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 EMBL:AF383172 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0044297 GO:GO:0004843 GO:GO:0004221 GO:GO:0030891
            eggNOG:COG5560 HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848
            MEROPS:C19.037 CTD:23032 OMA:TMEEDKS EMBL:AF383173 EMBL:AB029020
            EMBL:AK022864 EMBL:BC016663 IPI:IPI00236901 IPI:IPI00377264
            IPI:IPI00402757 RefSeq:NP_055832.3 RefSeq:NP_963918.1
            RefSeq:NP_963920.1 UniGene:Hs.480597 PDB:2UZG PDBsum:2UZG
            ProteinModelPortal:Q8TEY7 SMR:Q8TEY7 DIP:DIP-48942N IntAct:Q8TEY7
            MINT:MINT-1370210 STRING:Q8TEY7 PhosphoSite:Q8TEY7 DMDM:116242838
            PaxDb:Q8TEY7 PRIDE:Q8TEY7 DNASU:23032 Ensembl:ENST00000357428
            Ensembl:ENST00000370792 Ensembl:ENST00000370793
            Ensembl:ENST00000370794 GeneID:23032 KEGG:hsa:23032 UCSC:uc001dhs.3
            UCSC:uc001dhw.3 GeneCards:GC01M078161 H-InvDB:HIX0159957
            HGNC:HGNC:20059 HPA:HPA005719 neXtProt:NX_Q8TEY7
            PharmGKB:PA134955343 InParanoid:Q8TEY7 PhylomeDB:Q8TEY7
            ChiTaRS:USP33 EvolutionaryTrace:Q8TEY7 GenomeRNAi:23032
            NextBio:44018 ArrayExpress:Q8TEY7 Bgee:Q8TEY7 CleanEx:HS_USP33
            Genevestigator:Q8TEY7 GermOnline:ENSG00000077254 Uniprot:Q8TEY7
        Length = 942

 Score = 110 (43.8 bits), Expect = 3.9e-05, P = 3.9e-05
 Identities = 34/121 (28%), Positives = 59/121 (48%)

Query:    38 PENFTGE--LSSLFE-ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY 94
             P N T +  L ++F+ +  + D  D    RG+ GL+N+GNTC+M+A +Q+L     L ++
Sbjct:   153 PSNTTLKTPLVAVFDDLDIEADEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQF 212

Query:    95 FTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDYR 152
             F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y 
Sbjct:   213 FLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVN-PTFRGYS 268

Query:   153 Q 153
             Q
Sbjct:   269 Q 269


>UNIPROTKB|F1MF37 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:SYQEPSD GeneTree:ENSGT00680000099843 EMBL:DAAA02057720
            IPI:IPI00713142 Ensembl:ENSBTAT00000015592 Uniprot:F1MF37
        Length = 1269

 Score = 85 (35.0 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
 Identities = 17/30 (56%), Positives = 19/30 (63%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEY 94
             GV GLRN GNTCFM+A +Q L       EY
Sbjct:    43 GVAGLRNHGNTCFMNATLQCLSNTELFAEY 72

 Score = 65 (27.9 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query:   115 DEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             ++ A LVR +W+ +Y+  H  DFK I+  +  Q++   Q
Sbjct:   105 EQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQ 143

 Score = 44 (20.5 bits), Expect = 4.3e-05, Sum P(3) = 4.3e-05
 Identities = 10/22 (45%), Positives = 12/22 (54%)

Query:    12 CFSTASAASSFPIP-LPPPTSS 32
             CF    AA+  P P  PPP +S
Sbjct:     9 CFPPGPAAAPTPPPSCPPPPAS 30


>UNIPROTKB|K7EQL6 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00695 HGNC:HGNC:19143 EMBL:AC025048 EMBL:AC003962
            EMBL:AC037475 EMBL:AC104763 Ensembl:ENST00000592339 Uniprot:K7EQL6
        Length = 1274

 Score = 111 (44.1 bits), Expect = 4.3e-05, P = 4.3e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   400 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 459

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   +  +  + P+F  ++Q
Sbjct:   460 LVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 493


>POMBASE|SPCC16A11.12c [details] [associations]
            symbol:ubp1 "ubiquitin C-terminal hydrolase Ubp1"
            species:4896 "Schizosaccharomyces pombe" [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IDA] [GO:0005783
            "endoplasmic reticulum" evidence=IDA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IDA]
            InterPro:IPR001394 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695 PomBase:SPCC16A11.12c
            GO:GO:0005783 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0006511
            GO:GO:0004843 GO:GO:0016579 GO:GO:0004221 eggNOG:COG5560 PIR:T41085
            RefSeq:NP_587999.1 ProteinModelPortal:Q9USM5 MEROPS:C19.A55
            EnsemblFungi:SPCC16A11.12c.1 GeneID:2539228 KEGG:spo:SPCC16A11.12c
            KO:K11870 OMA:MESITLE OrthoDB:EOG4Q887G NextBio:20800398
            Uniprot:Q9USM5
        Length = 849

 Score = 109 (43.4 bits), Expect = 4.4e-05, P = 4.4e-05
 Identities = 29/107 (27%), Positives = 52/107 (48%)

Query:    51 ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX-- 108
             I+++ +++ N  + G+CGL NLGN+C+M++ +Q ++    L +YF +             
Sbjct:   264 ITKEQNLTIN-KEIGLCGLYNLGNSCYMNSALQCMIHTHELTKYFLSDSYEKDINYNNPL 322

Query:   109 -XXXXXVDEFALLVRKMW-SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
                      +A L++ +  +     V PS FK I+G     F  YRQ
Sbjct:   323 GMMGKVALSYASLLKMIHHTADMHSVSPSSFKFIIGEFNTYFSGYRQ 369


>UNIPROTKB|Q5REG5 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0016579 "protein deubiquitination" evidence=ISS]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=ISS]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037
            CTD:23032 EMBL:CR857564 EMBL:CR860104 RefSeq:NP_001124855.1
            UniGene:Pab.19411 ProteinModelPortal:Q5REG5 SMR:Q5REG5
            GeneID:100171716 KEGG:pon:100171716 InParanoid:Q5REG5
            Uniprot:Q5REG5
        Length = 914

 Score = 109 (43.4 bits), Expect = 4.8e-05, P = 4.8e-05
 Identities = 34/121 (28%), Positives = 59/121 (48%)

Query:    38 PENFTGE--LSSLFE-ISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEY 94
             P N T +  L ++F+ +  + D  D    RG+ GL+N+GNTC+M+A +Q+L     L ++
Sbjct:   122 PSNTTLKTPLVAVFDDLDIEVDEEDELRARGLTGLKNIGNTCYMNAALQALSNCPPLTQF 181

Query:    95 FTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDYR 152
             F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y 
Sbjct:   182 FLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPTNLFQGIKTVN-PTFRGYS 237

Query:   153 Q 153
             Q
Sbjct:   238 Q 238


>RGD|1306657 [details] [associations]
            symbol:Usp32 "ubiquitin specific peptidase 32" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA;ISO] [GO:0005509 "calcium ion binding" evidence=IEA]
            [GO:0005794 "Golgi apparatus" evidence=IEA;ISO] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00695 Prosite:PS00018 RGD:1306657
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 EMBL:CH473948 GO:GO:0004221 CTD:84669 KO:K11837
            OrthoDB:EOG49S65F GeneTree:ENSGT00680000099843 IPI:IPI00870119
            RefSeq:NP_001100502.1 UniGene:Rn.16359 Ensembl:ENSRNOT00000036814
            GeneID:303394 KEGG:rno:303394 NextBio:651274 Uniprot:D3ZBB7
        Length = 1431

 Score = 111 (44.1 bits), Expect = 4.9e-05, P = 4.9e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   557 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 616

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   +  +  + P+F  ++Q
Sbjct:   617 LVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 650


>UNIPROTKB|F1N3S5 [details] [associations]
            symbol:Bt.110642 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0008234 "cysteine-type peptidase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0005509 "calcium ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            Prosite:PS00018 GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 OMA:SDNNNQC
            GeneTree:ENSGT00680000099843 EMBL:DAAA02048411 EMBL:DAAA02048412
            EMBL:DAAA02048413 EMBL:DAAA02048414 IPI:IPI00705388
            Ensembl:ENSBTAT00000026766 Uniprot:F1N3S5
        Length = 1542

 Score = 111 (44.1 bits), Expect = 5.3e-05, P = 5.3e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   668 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 727

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   +  +  + P+F  ++Q
Sbjct:   728 LVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 761


>UNIPROTKB|Q8NFA0 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase 32"
            species:9606 "Homo sapiens" [GO:0005509 "calcium ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IDA]
            [GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016579 "protein
            deubiquitination" evidence=TAS] InterPro:IPR001125
            InterPro:IPR001394 InterPro:IPR002048 InterPro:IPR006615
            InterPro:IPR011992 InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337
            Pfam:PF13202 PRINTS:PR00450 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00054
            SMART:SM00695 Prosite:PS00018 GO:GO:0005794 GO:GO:0016020
            GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247
            GO:GO:0006511 eggNOG:COG5210 GO:GO:0016579 GO:GO:0004221
            CleanEx:HS_USP10 EMBL:AF533230 EMBL:AF350251 EMBL:AF155116
            IPI:IPI00185661 RefSeq:NP_115971.2 UniGene:Hs.132868
            ProteinModelPortal:Q8NFA0 SMR:Q8NFA0 IntAct:Q8NFA0 STRING:Q8NFA0
            MEROPS:C19.044 PhosphoSite:Q8NFA0 DMDM:47606649 PaxDb:Q8NFA0
            PRIDE:Q8NFA0 DNASU:84669 Ensembl:ENST00000300896 GeneID:84669
            KEGG:hsa:84669 UCSC:uc002iyn.1 CTD:84669 GeneCards:GC17M058254
            HGNC:HGNC:19143 HPA:HPA044365 MIM:607740 neXtProt:NX_Q8NFA0
            PharmGKB:PA134982542 HOGENOM:HOG000007511 HOVERGEN:HBG057958
            InParanoid:Q8NFA0 KO:K11837 OMA:SDNNNQC OrthoDB:EOG49S65F
            PhylomeDB:Q8NFA0 ChiTaRS:USP32 GenomeRNAi:84669 NextBio:74669
            ArrayExpress:Q8NFA0 Bgee:Q8NFA0 CleanEx:HS_USP32
            Genevestigator:Q8NFA0 GermOnline:ENSG00000170832 Uniprot:Q8NFA0
        Length = 1604

 Score = 111 (44.1 bits), Expect = 5.6e-05, P = 5.6e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   730 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 789

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   +  +  + P+F  ++Q
Sbjct:   790 LVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 823


>UNIPROTKB|F1PDR8 [details] [associations]
            symbol:USP32 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0005509 "calcium ion
            binding" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13202 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235 PROSITE:PS51283
            SMART:SM00054 SMART:SM00695 Prosite:PS00018 GO:GO:0008234
            GO:GO:0005509 Gene3D:1.10.238.10 InterPro:IPR018247 GO:GO:0006511
            GO:GO:0004221 OMA:SDNNNQC GeneTree:ENSGT00680000099843
            EMBL:AAEX03006607 EMBL:AAEX03006603 EMBL:AAEX03006604
            EMBL:AAEX03006605 EMBL:AAEX03006606 Ensembl:ENSCAFT00000028225
            Uniprot:F1PDR8
        Length = 1633

 Score = 111 (44.1 bits), Expect = 5.7e-05, P = 5.7e-05
 Identities = 26/94 (27%), Positives = 43/94 (45%)

Query:    63 QRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXX---XXXXXVDEFAL 119
             ++G  GL NLGNTCFM++ IQ +     L +YF +                      +  
Sbjct:   759 EKGATGLSNLGNTCFMNSSIQCVSNTQPLTQYFISGRHLYELNRTNPIGMKGHMAKCYGD 818

Query:   120 LVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             LV+++WSG    V P   +  +  + P+F  ++Q
Sbjct:   819 LVQELWSGTQKNVAPLKLRWTIAKYAPRFNGFQQ 852


>UNIPROTKB|A6QNM7 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:9913 "Bos taurus" [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008270 "zinc ion binding" evidence=ISS]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=ISS]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=ISS] [GO:0016579 "protein
            deubiquitination" evidence=ISS] [GO:0071108 "protein K48-linked
            deubiquitination" evidence=ISS] [GO:0007411 "axon guidance"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0048471 "perinuclear region of cytoplasm"
            evidence=IEA] [GO:0044297 "cell body" evidence=IEA] [GO:0001664
            "G-protein coupled receptor binding" evidence=IEA] [GO:0006897
            "endocytosis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            eggNOG:COG5560 GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:BC148905 IPI:IPI00708909
            RefSeq:NP_001094609.1 UniGene:Bt.46098 ProteinModelPortal:A6QNM7
            SMR:A6QNM7 STRING:A6QNM7 MEROPS:C19.037 Ensembl:ENSBTAT00000027667
            GeneID:531706 KEGG:bta:531706 CTD:23032 InParanoid:A6QNM7
            OMA:TMEEDKS OrthoDB:EOG4B8JC9 NextBio:20875513 Uniprot:A6QNM7
        Length = 912

 Score = 108 (43.1 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 34/122 (27%), Positives = 58/122 (47%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T + + L  + +D D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   122 PSNTTLK-TPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 180

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   181 FFLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVN-PTFRGY 236

Query:   152 RQ 153
              Q
Sbjct:   237 SQ 238


>UNIPROTKB|J9NW59 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0004221 GeneTree:ENSGT00690000101718
            EMBL:AAEX03004889 Ensembl:ENSCAFT00000045024 Uniprot:J9NW59
        Length = 912

 Score = 108 (43.1 bits), Expect = 6.1e-05, P = 6.1e-05
 Identities = 34/122 (27%), Positives = 58/122 (47%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T + + L  + +D D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   122 PSNTTLK-TPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 180

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   181 FFLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVN-PTFRGY 236

Query:   152 RQ 153
              Q
Sbjct:   237 SQ 238


>UNIPROTKB|F1P6Y2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:AAEX03004889
            Ensembl:ENSCAFT00000032445 Uniprot:F1P6Y2
        Length = 947

 Score = 108 (43.1 bits), Expect = 6.4e-05, P = 6.4e-05
 Identities = 34/122 (27%), Positives = 58/122 (47%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T + + L  + +D D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   153 PSNTTLK-TPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 211

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   212 FFLDCGGLARTDKKPAI---CKSYLKLMTELWHKSRPGSVVPTTLFQGIKTVN-PTFRGY 267

Query:   152 RQ 153
              Q
Sbjct:   268 SQ 269


>CGD|CAL0005412 [details] [associations]
            symbol:orf19.1516 species:5476 "Candida albicans" [GO:0005654
            "nucleoplasm" evidence=IEA] [GO:0043161 "proteasomal
            ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0016579 "protein deubiquitination" evidence=IEA] [GO:0045721
            "negative regulation of gluconeogenesis" evidence=IEA] [GO:0004843
            "ubiquitin-specific protease activity" evidence=IEA]
            InterPro:IPR000449 InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR009060 InterPro:IPR016652 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF00627 Pfam:PF02148 PIRSF:PIRSF016308
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            SMART:SM00290 CGD:CAL0005412 GO:GO:0046872 GO:GO:0008270
            GO:GO:0008234 InterPro:IPR015940 SMART:SM00165 PROSITE:PS50030
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            EMBL:AACQ01000007 SUPFAM:SSF46934 GO:GO:0008242 GO:GO:0004221
            KO:K11836 RefSeq:XP_722561.1 ProteinModelPortal:Q5AM59
            STRING:Q5AM59 GeneID:3635769 KEGG:cal:CaO19.1516 Uniprot:Q5AM59
        Length = 794

 Score = 107 (42.7 bits), Expect = 6.6e-05, P = 6.6e-05
 Identities = 28/102 (27%), Positives = 50/102 (49%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRK 123
             +G+ GL+NLGN+C++++ +Q+L   +   EYF +                  +   L   
Sbjct:   309 KGLTGLQNLGNSCYINSVLQALYTLNGYQEYFKDKKFPDINNPAIDLTS---QLIKLYDG 365

Query:   124 MWSGQYSI------------VHPSDFKQILGVHYPQFKDYRQ 153
             + SG+YS+            + PS FK ++G ++P+FK  RQ
Sbjct:   366 LQSGRYSVPGSLKGDDYQLGIKPSTFKNLIGENHPEFKTQRQ 407


>UNIPROTKB|F1MH36 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 IPI:IPI00715496 UniGene:Bt.24990 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:DAAA02006959
            Ensembl:ENSBTAT00000029184 Uniprot:F1MH36
        Length = 565

 Score = 105 (42.0 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>UNIPROTKB|E2RGE7 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0019784 "NEDD8-specific
            protease activity" evidence=IEA] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 CTD:27005 KO:K11833 OMA:NVQPRVG
            GeneTree:ENSGT00670000098024 EMBL:AAEX03018447 EMBL:AAEX03018448
            RefSeq:XP_536136.3 ProteinModelPortal:E2RGE7
            Ensembl:ENSCAFT00000020298 GeneID:478979 KEGG:cfa:478979
            NextBio:20854234 Uniprot:E2RGE7
        Length = 565

 Score = 105 (42.0 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>UNIPROTKB|Q9UK80 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0046872 "metal ion
            binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS;IDA;TAS] [GO:0006464 "cellular
            protein modification process" evidence=NAS] [GO:0008234
            "cysteine-type peptidase activity" evidence=ISS;IMP] [GO:0003713
            "transcription coactivator activity" evidence=ISS] [GO:0016578
            "histone deubiquitination" evidence=ISS] [GO:0045893 "positive
            regulation of transcription, DNA-dependent" evidence=ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=IDA]
            [GO:0004843 "ubiquitin-specific protease activity" evidence=IDA]
            [GO:0005575 "cellular_component" evidence=ND] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            EMBL:CH471121 EMBL:AL590714 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 PDB:2Y5B PDB:3I3T
            PDB:3MTN PDBsum:2Y5B PDBsum:3I3T PDBsum:3MTN MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD
            EMBL:AF177758 EMBL:AF233442 EMBL:AK292319 EMBL:AF217979
            EMBL:AB208899 EMBL:BC003130 EMBL:BC090946 EMBL:BC136291
            IPI:IPI00007262 IPI:IPI00376946 IPI:IPI00873033
            RefSeq:NP_001014443.1 RefSeq:NP_036607.3 UniGene:Hs.8015
            ProteinModelPortal:Q9UK80 SMR:Q9UK80 IntAct:Q9UK80 STRING:Q9UK80
            PhosphoSite:Q9UK80 DMDM:10720334 PRIDE:Q9UK80
            Ensembl:ENST00000289865 Ensembl:ENST00000368001
            Ensembl:ENST00000368002 GeneID:27005 KEGG:hsa:27005 UCSC:uc010pkc.2
            GeneCards:GC01P161129 HGNC:HGNC:12620 HPA:HPA028397 MIM:604729
            neXtProt:NX_Q9UK80 PharmGKB:PA37246 OMA:NVQPRVG BRENDA:3.1.2.15
            EvolutionaryTrace:Q9UK80 GenomeRNAi:27005 NextBio:49506
            PMAP-CutDB:Q9UK80 Bgee:Q9UK80 CleanEx:HS_USP21
            Genevestigator:Q9UK80 GermOnline:ENSG00000143258 Uniprot:Q9UK80
        Length = 565

 Score = 105 (42.0 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>UNIPROTKB|F1S196 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0019784 "NEDD8-specific protease
            activity" evidence=IEA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0006511 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 KO:K11833 OMA:NVQPRVG GeneTree:ENSGT00670000098024
            EMBL:CU463216 RefSeq:XP_001927817.1 UniGene:Ssc.6203
            Ensembl:ENSSSCT00000006971 GeneID:100152455 KEGG:ssc:100152455
            Uniprot:F1S196
        Length = 565

 Score = 105 (42.0 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>RGD|1588822 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10116
            "Rattus norvegicus" [GO:0003713 "transcription coactivator
            activity" evidence=ISO;ISS] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISO;ISS] [GO:0004843 "ubiquitin-specific
            protease activity" evidence=ISO;ISS] [GO:0005634 "nucleus"
            evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
            "transcription, DNA-dependent" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            [GO:0008234 "cysteine-type peptidase activity" evidence=ISO;ISS]
            [GO:0016578 "histone deubiquitination" evidence=ISO;ISS]
            [GO:0019784 "NEDD8-specific protease activity" evidence=ISO;ISS]
            [GO:0045893 "positive regulation of transcription, DNA-dependent"
            evidence=ISO;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 RGD:1588822 GO:GO:0005634
            GO:GO:0005737 GO:GO:0045893 GO:GO:0046872 GO:GO:0006351
            GO:GO:0003713 GO:GO:0006511 GO:GO:0016578 GO:GO:0004843
            GO:GO:0004221 GO:GO:0019784 eggNOG:COG5533 CTD:27005
            HOVERGEN:HBG011164 KO:K11833 OrthoDB:EOG4229JD EMBL:BC166443
            IPI:IPI00896130 RefSeq:NP_001121110.1 UniGene:Rn.136743
            ProteinModelPortal:B2GUX4 PRIDE:B2GUX4 GeneID:688466
            KEGG:rno:688466 UCSC:RGD:1588822 NextBio:736555 ArrayExpress:B2GUX4
            Genevestigator:B2GUX4 Uniprot:B2GUX4
        Length = 565

 Score = 105 (42.0 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>MGI|MGI:1353665 [details] [associations]
            symbol:Usp21 "ubiquitin specific peptidase 21" species:10090
            "Mus musculus" [GO:0003713 "transcription coactivator activity"
            evidence=IDA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO;IDA] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISO] [GO:0005634 "nucleus" evidence=IC]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
            transcription, DNA-dependent" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008233 "peptidase
            activity" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISO;IDA] [GO:0016568 "chromatin modification"
            evidence=IEA] [GO:0016578 "histone deubiquitination" evidence=IDA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0019784
            "NEDD8-specific protease activity" evidence=ISO] [GO:0045893
            "positive regulation of transcription, DNA-dependent" evidence=IDA]
            [GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 MGI:MGI:1353665 GO:GO:0005634 GO:GO:0005737
            GO:GO:0045893 GO:GO:0046872 GO:GO:0006351 GO:GO:0003713
            GO:GO:0006511 GO:GO:0016578 GO:GO:0004843 GO:GO:0004221
            GO:GO:0019784 eggNOG:COG5533 HOGENOM:HOG000231498 MEROPS:C19.034
            CTD:27005 HOVERGEN:HBG011164 KO:K11833 EMBL:AF177759 EMBL:AK011148
            EMBL:BC021903 IPI:IPI00830385 RefSeq:NP_038947.2 UniGene:Mm.27510
            ProteinModelPortal:Q9QZL6 SMR:Q9QZL6 STRING:Q9QZL6
            PhosphoSite:Q9QZL6 PRIDE:Q9QZL6 Ensembl:ENSMUST00000111306
            GeneID:30941 KEGG:mmu:30941 UCSC:uc011wwa.1
            GeneTree:ENSGT00670000098024 NextBio:307382 Bgee:Q9QZL6
            CleanEx:MM_USP21 Genevestigator:Q9QZL6
            GermOnline:ENSMUSG00000053483 Uniprot:Q9QZL6
        Length = 566

 Score = 105 (42.0 bits), Expect = 7.0e-05, P = 7.0e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNAVLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>UNIPROTKB|I3L7M6 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0044297 "cell body"
            evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0008277 "regulation of G-protein coupled receptor protein
            signaling pathway" evidence=IEA] [GO:0007411 "axon guidance"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0007411
            GO:GO:0016477 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0044297 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:TMEEDKS EMBL:CU915644
            Ensembl:ENSSSCT00000026836 Uniprot:I3L7M6
        Length = 901

 Score = 107 (42.7 bits), Expect = 7.7e-05, P = 7.7e-05
 Identities = 34/122 (27%), Positives = 58/122 (47%)

Query:    38 PENFTGELSSLFEISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVE 93
             P N T + + L  + +D D+     D    RG+ GL+N+GNTC+M+A +Q+L     L +
Sbjct:   122 PSNTTLK-TPLVAVFDDLDIEVEEEDELKARGLTGLKNIGNTCYMNAALQALSNCPPLTQ 180

Query:    94 YFTNXXXXXXXXXXXXXXXXVDEFALLVRKMW--SGQYSIVHPSDFKQILGVHYPQFKDY 151
             +F +                   +  L+ ++W  S   S+V  + F+ I  V+ P F+ Y
Sbjct:   181 FFLDCGGLARTDKKPA----CKSYLKLMTELWHKSRPGSVVPTNLFQGIKTVN-PTFRGY 235

Query:   152 RQ 153
              Q
Sbjct:   236 SQ 237


>UNIPROTKB|Q2KJ72 [details] [associations]
            symbol:USP21 "Ubiquitin carboxyl-terminal hydrolase 21"
            species:9913 "Bos taurus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=ISS] [GO:0004843 "ubiquitin-specific protease
            activity" evidence=ISS] [GO:0019784 "NEDD8-specific protease
            activity" evidence=ISS] [GO:0008234 "cysteine-type peptidase
            activity" evidence=ISS] [GO:0045893 "positive regulation of
            transcription, DNA-dependent" evidence=ISS] [GO:0016578 "histone
            deubiquitination" evidence=ISS] [GO:0003713 "transcription
            coactivator activity" evidence=ISS] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0046872
            "metal ion binding" evidence=IEA] [GO:0006351 "transcription,
            DNA-dependent" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0005634 GO:GO:0005737 GO:GO:0045893
            GO:GO:0046872 GO:GO:0006351 GO:GO:0003713 GO:GO:0006511
            GO:GO:0016578 GO:GO:0004843 GO:GO:0004221 GO:GO:0019784
            eggNOG:COG5533 HOGENOM:HOG000231498 HSSP:P43593 EMBL:BC105488
            IPI:IPI00715496 RefSeq:NP_001039841.1 UniGene:Bt.24990
            ProteinModelPortal:Q2KJ72 MEROPS:C19.034 GeneID:534273
            KEGG:bta:534273 CTD:27005 HOVERGEN:HBG011164 InParanoid:Q2KJ72
            KO:K11833 OrthoDB:EOG4229JD NextBio:20876334 Uniprot:Q2KJ72
        Length = 565

 Score = 104 (41.7 bits), Expect = 8.9e-05, P = 8.9e-05
 Identities = 25/90 (27%), Positives = 40/90 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GLRNLGNTCF++A +Q L +   L ++                    + FA ++  +
Sbjct:   210 GHVGLRNLGNTCFLNALLQCLSSTRPLRDFCLRRDFRQEVPGGGRAQELTEAFADVIGAL 269

Query:   125 WS-GQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W       V+P+ F+ +   + P F  Y Q
Sbjct:   270 WHPDSCEAVNPTRFRAVFQKYVPSFSGYSQ 299


>ZFIN|ZDB-GENE-040426-2323 [details] [associations]
            symbol:usp33 "ubiquitin specific peptidase 33"
            species:7955 "Danio rerio" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISS] [GO:0008270 "zinc ion binding"
            evidence=IEA;ISS] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0016477 "cell migration"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0006897 "endocytosis" evidence=IEA] [GO:0005737 "cytoplasm"
            evidence=IEA] [GO:0008233 "peptidase activity" evidence=IEA]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0048471 "perinuclear region of
            cytoplasm" evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695
            ZFIN:ZDB-GENE-040426-2323 GO:GO:0048471 GO:GO:0007411 GO:GO:0016477
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 OMA:TMEEDKS
            OrthoDB:EOG4B8JC9 EMBL:BX649634 EMBL:BC066557 IPI:IPI00512747
            RefSeq:NP_998392.1 UniGene:Dr.32515 ProteinModelPortal:A5PMR2
            SMR:A5PMR2 Ensembl:ENSDART00000018114 GeneID:406508 KEGG:dre:406508
            NextBio:20818084 ArrayExpress:A5PMR2 Bgee:A5PMR2 Uniprot:A5PMR2
        Length = 897

 Score = 106 (42.4 bits), Expect = 9.8e-05, P = 9.8e-05
 Identities = 27/106 (25%), Positives = 50/106 (47%)

Query:    50 EISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXX 109
             ++  + +  D    RG+ GL+N+GNTC+M+A +Q+L     L ++F              
Sbjct:   139 DLDMETEEEDELRTRGLTGLKNIGNTCYMNAALQALSNCPPLTQFFLECGGLVKTDKKPA 198

Query:   110 XXXXVDEFALLVRKMW-SGQYSIVHPSD-FKQILGVHYPQFKDYRQ 153
                    +  L+  +W   + + V P++ F+ I  V+ P F+ Y Q
Sbjct:   199 L---CKSYQKLITDLWHKNRNAYVVPTNLFQGIKAVN-PMFRGYSQ 240


>UNIPROTKB|B1WBD7 [details] [associations]
            symbol:usp20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:8355 "Xenopus laevis" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOVERGEN:HBG054196 KO:K11848
            EMBL:BC161716 RefSeq:NP_001121345.1 UniGene:Xl.16107
            ProteinModelPortal:B1WBD7 SMR:B1WBD7 GeneID:100158436
            KEGG:xla:100158436 Xenbase:XB-GENE-966533 Uniprot:B1WBD7
        Length = 840

 Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
 Identities = 36/136 (26%), Positives = 59/136 (43%)

Query:    19 ASSFPIPLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFM 78
             A  FP P  P  S  +  G +   GE       SE ++  D+   RG+ G++N+GN+C+M
Sbjct:    65 AQDFPSPAHPLKSVPIAVGDD---GE-------SESDE--DDIKPRGLTGMKNIGNSCYM 112

Query:    79 SAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQY-SIVHPSDF 137
             +A +Q+L     L ++F                     +  LV ++W  +  S V PS  
Sbjct:   113 NAALQALSNCPPLTQFFLECGGLVRTDKKPAL---CKSYQKLVSELWHKKRPSYVVPSSL 169

Query:   138 KQILGVHYPQFKDYRQ 153
                + +  P F+ Y Q
Sbjct:   170 YHGIKLINPLFRGYSQ 185


>UNIPROTKB|Q28CN3 [details] [associations]
            symbol:usp33 "Ubiquitin carboxyl-terminal hydrolase 33"
            species:8364 "Xenopus (Silurana) tropicalis" [GO:0004197
            "cysteine-type endopeptidase activity" evidence=ISS] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=ISS] [GO:0007411 "axon
            guidance" evidence=ISS] [GO:0008270 "zinc ion binding"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0016477 "cell
            migration" evidence=ISS] [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISS] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0007411 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 eggNOG:COG5560 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 MEROPS:C19.037 CTD:23032 EMBL:CR926290
            EMBL:BC171081 RefSeq:NP_001016228.1 UniGene:Str.42260
            ProteinModelPortal:Q28CN3 SMR:Q28CN3 GeneID:548982 KEGG:xtr:548982
            Xenbase:XB-GENE-1016674 Uniprot:Q28CN3
        Length = 892

 Score = 105 (42.0 bits), Expect = 0.00012, P = 0.00012
 Identities = 31/109 (28%), Positives = 51/109 (46%)

Query:    51 ISEDNDVS----DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXX 106
             +SE+ D+     D    RG+ GL+N+GNTC+M+A +Q+L     L  YF +         
Sbjct:   128 VSENLDIELEEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHYFLDCGGLARTDK 187

Query:   107 XXXXXXXVDEFALLVRKMW-SGQYSIVHPSD-FKQILGVHYPQFKDYRQ 153
                       +  L+  +W   +   V P++ F+ I  V+ P F+ Y Q
Sbjct:   188 KPAL---CKSYQKLMSDIWHKNRPGFVIPTNLFQGIKSVN-PTFRGYSQ 232


>UNIPROTKB|F1P4F0 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0070536 "protein K63-linked deubiquitination" evidence=IEA]
            [GO:0071108 "protein K48-linked deubiquitination" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:AADN02026599
            EMBL:AADN02026598 IPI:IPI00581772 Ensembl:ENSGALT00000006585
            Uniprot:F1P4F0
        Length = 903

 Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
 Identities = 29/103 (28%), Positives = 47/103 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX 111
             SE  D  D+   RG+ G++NLGN+C+M+A +Q+L     L ++F                
Sbjct:   127 SESED--DDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL- 183

Query:   112 XXVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
                  +  LV ++W  +  S V PS     + +  P F+ Y Q
Sbjct:   184 --CKSYQKLVSEVWHKKRPSYVVPSSLSHGIKLVNPMFRGYAQ 224


>UNIPROTKB|B7ZVX5 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS50235
            GO:GO:0006511 GO:GO:0004221 EMBL:AC027045 EMBL:AC118755
            IPI:IPI00166377 RefSeq:NP_001254505.1 UniGene:Hs.709621
            GeneID:124739 KEGG:hsa:124739 CTD:124739 HGNC:HGNC:20072
            HOVERGEN:HBG094126 KO:K11856 EMBL:BC136368 EMBL:BC171759
            STRING:B7ZVX5 Ensembl:ENST00000570475 UCSC:uc010vva.2
            Uniprot:B7ZVX5
        Length = 1118

 Score = 106 (42.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query:    59 DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFA 118
             D     G  GL+N GNTCFM+A +Q L     L E+                    ++ A
Sbjct:    93 DGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLA----LGRYRAAPGRAEVTEQLA 148

Query:   119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              LVR +W+ +Y+    ++FK  +  +  QF+   Q
Sbjct:   149 ALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQ 183


>UNIPROTKB|E2RFR2 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:AAEX03003657
            EMBL:AAEX03003658 EMBL:AAEX03003659 Ensembl:ENSCAFT00000027639
            Uniprot:E2RFR2
        Length = 1121

 Score = 106 (42.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query:    59 DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFA 118
             D     G  GL+N GNTCFM+A +Q L     L E+                    ++ A
Sbjct:    83 DGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLA----LGRYRAAPGRAEVTEQLA 138

Query:   119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              LVR +W+ +Y+    ++FK  +  +  QF+   Q
Sbjct:   139 ALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNAQ 173


>UNIPROTKB|E1BWB2 [details] [associations]
            symbol:USP33 "Ubiquitin carboxyl-terminal hydrolase"
            species:9031 "Gallus gallus" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IEA] [GO:0016477 "cell migration" evidence=IEA]
            [GO:0044297 "cell body" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 GO:GO:0016477 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0044297
            GO:GO:0004221 GeneTree:ENSGT00690000101718 KO:K11848 CTD:23032
            EMBL:AADN02012750 IPI:IPI00598742 RefSeq:XP_422389.2
            UniGene:Gga.26668 ProteinModelPortal:E1BWB2
            Ensembl:ENSGALT00000014598 GeneID:424553 KEGG:gga:424553
            NextBio:20826873 Uniprot:E1BWB2
        Length = 910

 Score = 105 (42.0 bits), Expect = 0.00013, P = 0.00013
 Identities = 30/111 (27%), Positives = 51/111 (45%)

Query:    45 LSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXX 104
             LS++F+  +     D    RG+ GL+N+GNTC+M+A +Q+L     L  +F +       
Sbjct:   130 LSAVFDDLDIEVEEDELKTRGLTGLKNIGNTCYMNAALQALSNCPPLTHFFLDCGGLART 189

Query:   105 XXXXXXXXXVDEFALLVRKMWSGQY--SIVHPSDFKQILGVHYPQFKDYRQ 153
                         +  L+ ++W      S+V    F+ I  V+ P F+ Y Q
Sbjct:   190 DKKPAI---CKSYLKLMTELWHKNRPGSVVPTGLFQGIKSVN-PTFRGYSQ 236


>UNIPROTKB|Q70EL4 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase 43"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 EMBL:CH471108 GO:GO:0008234 GO:GO:0006511
            GO:GO:0004221 EMBL:AC027045 HSSP:P54578 eggNOG:COG5560
            EMBL:AJ583817 EMBL:AK055188 EMBL:AK090821 EMBL:AC118755
            EMBL:BC144041 IPI:IPI00166377 IPI:IPI00176488 IPI:IPI00739286
            RefSeq:NP_001254505.1 RefSeq:NP_694942.3 UniGene:Hs.709621
            ProteinModelPortal:Q70EL4 IntAct:Q70EL4 MINT:MINT-3976419
            STRING:Q70EL4 MEROPS:C19.976 PhosphoSite:Q70EL4 DMDM:296452852
            PaxDb:Q70EL4 PRIDE:Q70EL4 Ensembl:ENST00000285199
            Ensembl:ENST00000570827 Ensembl:ENST00000573955
            Ensembl:ENST00000574408 GeneID:124739 KEGG:hsa:124739
            UCSC:uc002gma.4 UCSC:uc002gmc.4 CTD:124739 GeneCards:GC17P009489
            H-InvDB:HIX0013531 HGNC:HGNC:20072 HPA:HPA023389 HPA:HPA027762
            neXtProt:NX_Q70EL4 PharmGKB:PA134865304 HOGENOM:HOG000293426
            HOVERGEN:HBG094126 InParanoid:Q70EL4 KO:K11856 OMA:RSISMKA
            OrthoDB:EOG4DR9BH GenomeRNAi:124739 NextBio:81362
            ArrayExpress:Q70EL4 Bgee:Q70EL4 CleanEx:HS_USP43
            Genevestigator:Q70EL4 GermOnline:ENSG00000154914 Uniprot:Q70EL4
        Length = 1123

 Score = 106 (42.4 bits), Expect = 0.00013, P = 0.00013
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query:    59 DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFA 118
             D     G  GL+N GNTCFM+A +Q L     L E+                    ++ A
Sbjct:    93 DGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLA----LGRYRAAPGRAEVTEQLA 148

Query:   119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              LVR +W+ +Y+    ++FK  +  +  QF+   Q
Sbjct:   149 ALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQ 183


>UNIPROTKB|F1SS87 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            CTD:124739 KO:K11856 OMA:RSISMKA GeneTree:ENSGT00680000099843
            EMBL:CU929537 RefSeq:XP_003132035.1 UniGene:Ssc.22285
            Ensembl:ENSSSCT00000019584 GeneID:100515447 KEGG:ssc:100515447
            Uniprot:F1SS87
        Length = 1123

 Score = 105 (42.0 bits), Expect = 0.00016, P = 0.00016
 Identities = 27/95 (28%), Positives = 42/95 (44%)

Query:    59 DNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFA 118
             D     G  GL+N GNTCFM+A +Q L     L E+                    ++ A
Sbjct:    95 DGARPPGAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLA----LGRYRAVPGRAEVTEQLA 150

Query:   119 LLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
              LVR +W+ +Y+    ++FK  +  +  QF+   Q
Sbjct:   151 ALVRALWTREYTPQLSAEFKNAVSKYGSQFQGNSQ 185


>UNIPROTKB|A7Z056 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9913 "Bos taurus" [GO:0016579 "protein deubiquitination"
            evidence=ISS] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISS] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISS] [GO:0008277 "regulation of G-protein coupled receptor
            protein signaling pathway" evidence=ISS] [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=ISS] [GO:0048471 "perinuclear
            region of cytoplasm" evidence=IEA] [GO:0001664 "G-protein coupled
            receptor binding" evidence=IEA] [GO:0006897 "endocytosis"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277 GO:GO:0071108
            GO:GO:0070536 GO:GO:0004197 GO:GO:0004221 eggNOG:COG5560
            EMBL:BC153254 IPI:IPI00700030 RefSeq:NP_001098803.1
            UniGene:Bt.26746 ProteinModelPortal:A7Z056 SMR:A7Z056 STRING:A7Z056
            PRIDE:A7Z056 Ensembl:ENSBTAT00000027070 GeneID:505839
            KEGG:bta:505839 CTD:10868 GeneTree:ENSGT00690000101718
            HOGENOM:HOG000286031 HOVERGEN:HBG054196 InParanoid:A7Z056 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ NextBio:20867329 ArrayExpress:A7Z056
            Uniprot:A7Z056
        Length = 912

 Score = 104 (41.7 bits), Expect = 0.00016, P = 0.00016
 Identities = 33/146 (22%), Positives = 58/146 (39%)

Query:     9 QDECFSTASAASSFPIPLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCG 68
             + E F     A+  P P P  +  D             ++ +  E     D+   RG+ G
Sbjct:    87 EKEVFLEPRLAAHPPGPAPKFSEQDSPPPSHPLKAVPIAVADEGESESEDDDLKPRGLTG 146

Query:    69 LRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQ 128
             ++NLGN+C+M+A +Q+L     L ++F                     +  LV ++W  +
Sbjct:   147 MKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL---CKSYQKLVSEVWHRK 203

Query:   129 Y-SIVHPSDFKQILGVHYPQFKDYRQ 153
               S V P+     + +  P F+ Y Q
Sbjct:   204 RPSYVVPTSLSHGIKLVNPMFRGYAQ 229


>RGD|1308216 [details] [associations]
            symbol:Usp44 "ubiquitin specific peptidase 44" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0051322 "anaphase"
            evidence=IEA] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=IEA] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS50235 PROSITE:PS50271 SMART:SM00290 RGD:1308216
            GO:GO:0005634 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0090231 EMBL:CH473960 GO:GO:0051322
            GO:GO:0060564 GeneTree:ENSGT00690000101718 CTD:84101 KO:K11834
            OrthoDB:EOG4XGZZK IPI:IPI00870073 RefSeq:NP_001101553.1
            UniGene:Rn.64954 Ensembl:ENSRNOT00000007465 GeneID:314746
            KEGG:rno:314746 UCSC:RGD:1308216 NextBio:668165 Uniprot:D4A251
        Length = 481

 Score = 88 (36.0 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 29/81 (35%), Positives = 39/81 (48%)

Query:    14 STASAASSFPIPLPPPTSSDVCEGPENFTGELSSLFEISEDND---VSDNCAQR------ 64
             S A+     P+  PPP        P +   E +     SED     VSD+  +R      
Sbjct:   216 SEAATVEILPVQAPPPP-------PASPAKEKALALPPSEDGKLKRVSDSLIKRRPAVTP 268

Query:    65 GVCGLRNLGNTCFMSAGIQSL 85
             GV GLRNLGNTC+M++ +Q L
Sbjct:   269 GVTGLRNLGNTCYMNSVLQVL 289

 Score = 56 (24.8 bits), Expect = 0.00019, Sum P(2) = 0.00019
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query:   116 EFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             E   L + MWSG++++V P      +    P F+ Y Q
Sbjct:   385 ELHTLFQVMWSGEWALVSPFAMLHSVWKLIPAFRGYAQ 422


>UNIPROTKB|I3LBG3 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9823 "Sus scrofa" [GO:0071108 "protein K48-linked
            deubiquitination" evidence=IEA] [GO:0070536 "protein K63-linked
            deubiquitination" evidence=IEA] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=IEA]
            [GO:0004221 "ubiquitin thiolesterase activity" evidence=IEA]
            [GO:0004197 "cysteine-type endopeptidase activity" evidence=IEA]
            [GO:0001664 "G-protein coupled receptor binding" evidence=IEA]
            [GO:0008270 "zinc ion binding" evidence=IEA] [GO:0006511
            "ubiquitin-dependent protein catabolic process" evidence=IEA]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            GeneTree:ENSGT00690000101718 OMA:ADYGQIS EMBL:CU459043
            Ensembl:ENSSSCT00000023659 Uniprot:I3LBG3
        Length = 918

 Score = 103 (41.3 bits), Expect = 0.00021, P = 0.00021
 Identities = 39/142 (27%), Positives = 60/142 (42%)

Query:    13 FSTASAASSFPIPLPPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLRNL 72
             FS   A  S     PPP    +   P     E  S  E SED+D+      RG+ G++NL
Sbjct:   107 FSEQVALRSSCQDSPPPPCHPLKAVPIAVADEGES--E-SEDDDLKP----RGLTGMKNL 159

Query:    73 GNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKMWSGQY-SI 131
             GN+C+M+A +Q+L     L ++F                     +  LV ++W  +  S 
Sbjct:   160 GNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL---CKSYQKLVTEVWHRKRPSY 216

Query:   132 VHPSDFKQILGVHYPQFKDYRQ 153
             V P+     + +  P F+ Y Q
Sbjct:   217 VVPTSLSHGIKLVNPMFRGYAQ 238


>RGD|1562211 [details] [associations]
            symbol:Usp51 "ubiquitin specific peptidase 51" species:10116
            "Rattus norvegicus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 RGD:1562211
            GO:GO:0046872 GO:GO:0008270 GO:GO:0008234 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0006511 GO:GO:0004221 KO:K11366
            GeneTree:ENSGT00690000101718 OrthoDB:EOG48PMJS CTD:158880
            EMBL:CH474063 IPI:IPI00561109 RefSeq:NP_001101722.1
            UniGene:Rn.56303 Ensembl:ENSRNOT00000029397 GeneID:317398
            KEGG:rno:317398 UCSC:RGD:1562211 NextBio:671739 Uniprot:D3ZUR6
        Length = 696

 Score = 101 (40.6 bits), Expect = 0.00025, P = 0.00025
 Identities = 28/89 (31%), Positives = 40/89 (44%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G+ GL NLGNTCFM+  +Q+L     L E+F +                V E + L + M
Sbjct:   358 GLRGLINLGNTCFMNCIVQALTRIPLLKEFFLSDKHKCMMTSPSLCL--VCEMSSLFQAM 415

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +SG  S   P     ++ +H      YRQ
Sbjct:   416 YSGNQSPHIPYKLLHLIWIHAEHLAGYRQ 444


>UNIPROTKB|E1BKF4 [details] [associations]
            symbol:USP43 "Ubiquitin carboxyl-terminal hydrolase"
            species:9913 "Bos taurus" [GO:0008234 "cysteine-type peptidase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:RSISMKA GeneTree:ENSGT00680000099843 EMBL:DAAA02048838
            EMBL:DAAA02048839 IPI:IPI00904143 Ensembl:ENSBTAT00000000131
            Uniprot:E1BKF4
        Length = 1121

 Score = 103 (41.3 bits), Expect = 0.00026, P = 0.00026
 Identities = 26/89 (29%), Positives = 41/89 (46%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVDEFALLVRKM 124
             G  GL+N GNTCFM+A +Q L     L E+                    ++ A LVR +
Sbjct:    98 GAQGLKNHGNTCFMNAVVQCLSNTDLLAEFLA----LRRYRAEPGRAEVTEQLAALVRAL 153

Query:   125 WSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             W+ +Y+    ++FK  +  +  QF+   Q
Sbjct:   154 WTREYTPQLSAEFKNAVSKYGAQFQGNAQ 182


>UNIPROTKB|Q5R5Z6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9601 "Pongo abelii" [GO:0004197 "cysteine-type
            endopeptidase activity" evidence=ISS] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=ISS] [GO:0008277 "regulation of
            G-protein coupled receptor protein signaling pathway" evidence=ISS]
            [GO:0016579 "protein deubiquitination" evidence=ISS] [GO:0070536
            "protein K63-linked deubiquitination" evidence=ISS] [GO:0071108
            "protein K48-linked deubiquitination" evidence=ISS]
            InterPro:IPR001394 InterPro:IPR001607 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 Pfam:PF06337
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271
            PROSITE:PS51283 SMART:SM00695 GO:GO:0048471 GO:GO:0046872
            GO:GO:0008270 GO:GO:0006897 Gene3D:3.30.40.10 InterPro:IPR013083
            GO:GO:0006511 GO:GO:0008277 GO:GO:0071108 GO:GO:0070536
            GO:GO:0004197 GO:GO:0004221 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 EMBL:CR860704 RefSeq:NP_001126647.1
            UniGene:Pab.18678 ProteinModelPortal:Q5R5Z6 SMR:Q5R5Z6
            GeneID:100173645 KEGG:pon:100173645 InParanoid:Q5R5Z6
            Uniprot:Q5R5Z6
        Length = 913

 Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
 Identities = 28/103 (27%), Positives = 47/103 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX 111
             SE  D  D+   RG+ G++NLGN+C+M+A +Q+L     L ++F                
Sbjct:   131 SESED--DDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL- 187

Query:   112 XXVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
                  +  LV ++W  +  S V P+     + +  P F+ Y Q
Sbjct:   188 --CKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQ 228


>UNIPROTKB|Q9Y2K6 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase 20"
            species:9606 "Homo sapiens" [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
            [GO:0005575 "cellular_component" evidence=ND] [GO:0004221
            "ubiquitin thiolesterase activity" evidence=IDA] [GO:0070536
            "protein K63-linked deubiquitination" evidence=IDA] [GO:0004197
            "cysteine-type endopeptidase activity" evidence=IMP] [GO:0008277
            "regulation of G-protein coupled receptor protein signaling
            pathway" evidence=IMP] [GO:0001664 "G-protein coupled receptor
            binding" evidence=IPI] [GO:0016579 "protein deubiquitination"
            evidence=IDA] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0048471
            GO:GO:0046872 GO:GO:0008270 EMBL:CH471090 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:AL158207 eggNOG:COG5560 CTD:10868 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            EMBL:AY074877 EMBL:AB023220 EMBL:BC039593 EMBL:Y17457 EMBL:Y17459
            IPI:IPI00328285 RefSeq:NP_001008563.2 RefSeq:NP_001103773.2
            RefSeq:NP_006667.3 UniGene:Hs.5452 ProteinModelPortal:Q9Y2K6
            SMR:Q9Y2K6 IntAct:Q9Y2K6 STRING:Q9Y2K6 MEROPS:C19.025
            PhosphoSite:Q9Y2K6 DMDM:116242837 PRIDE:Q9Y2K6
            Ensembl:ENST00000315480 Ensembl:ENST00000358355
            Ensembl:ENST00000372429 GeneID:10868 KEGG:hsa:10868 UCSC:uc004byr.2
            GeneCards:GC09P132596 H-InvDB:HIX0008459 HGNC:HGNC:12619
            HPA:HPA006287 neXtProt:NX_Q9Y2K6 PharmGKB:PA37245 InParanoid:Q9Y2K6
            PhylomeDB:Q9Y2K6 ChiTaRS:USP20 GenomeRNAi:10868 NextBio:41265
            ArrayExpress:Q9Y2K6 Bgee:Q9Y2K6 CleanEx:HS_USP20
            Genevestigator:Q9Y2K6 GermOnline:ENSG00000136878 Uniprot:Q9Y2K6
        Length = 914

 Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
 Identities = 28/103 (27%), Positives = 47/103 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX 111
             SE  D  D+   RG+ G++NLGN+C+M+A +Q+L     L ++F                
Sbjct:   132 SESED--DDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL- 188

Query:   112 XXVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
                  +  LV ++W  +  S V P+     + +  P F+ Y Q
Sbjct:   189 --CKSYQKLVSEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQ 229


>UNIPROTKB|F1PD56 [details] [associations]
            symbol:USP20 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA] [GO:0008277 "regulation
            of G-protein coupled receptor protein signaling pathway"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=IEA] [GO:0001664 "G-protein coupled receptor binding"
            evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 GO:GO:0046872
            GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS EMBL:AAEX03006844 RefSeq:XP_537816.3
            Ensembl:ENSCAFT00000031793 GeneID:480696 KEGG:cfa:480696
            Uniprot:F1PD56
        Length = 915

 Score = 102 (41.0 bits), Expect = 0.00027, P = 0.00027
 Identities = 28/103 (27%), Positives = 47/103 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX 111
             SE  D  D+   RG+ G++NLGN+C+M+A +Q+L     L ++F                
Sbjct:   132 SESED--DDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL- 188

Query:   112 XXVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
                  +  LV ++W  +  S V P+     + +  P F+ Y Q
Sbjct:   189 --CKSYQKLVSEVWHRRRPSYVVPTSLSHGIKLVNPMFRGYAQ 229


>RGD|1305621 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10116
            "Rattus norvegicus" [GO:0001664 "G-protein coupled receptor
            binding" evidence=IEA;ISO] [GO:0004197 "cysteine-type endopeptidase
            activity" evidence=IEA;ISO] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA;ISO] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0008270 "zinc ion
            binding" evidence=IEA] [GO:0008277 "regulation of G-protein coupled
            receptor protein signaling pathway" evidence=IEA;ISO] [GO:0016579
            "protein deubiquitination" evidence=ISO] [GO:0070536 "protein
            K63-linked deubiquitination" evidence=IEA;ISO] [GO:0071108 "protein
            K48-linked deubiquitination" evidence=IEA;ISO] InterPro:IPR001394
            InterPro:IPR001607 InterPro:IPR006615 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF02148 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS50271 PROSITE:PS51283
            SMART:SM00695 RGD:1305621 GO:GO:0046872 GO:GO:0008270
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 GO:GO:0008277
            GO:GO:0071108 GO:GO:0070536 GO:GO:0004197 GO:GO:0004221
            EMBL:CH474001 CTD:10868 GeneTree:ENSGT00690000101718 KO:K11848
            OMA:ADYGQIS OrthoDB:EOG4D52WZ IPI:IPI00869542 RefSeq:NP_001101297.1
            Ensembl:ENSRNOT00000010786 GeneID:311856 KEGG:rno:311856
            UCSC:RGD:1305621 NextBio:664327 Uniprot:D3ZLQ8
        Length = 915

 Score = 101 (40.6 bits), Expect = 0.00034, P = 0.00034
 Identities = 27/103 (26%), Positives = 47/103 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX 111
             SE  D  D+   RG+ G++NLGN+C+M+A +Q+L     L ++F                
Sbjct:   132 SESED--DDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL- 188

Query:   112 XXVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
                  +  L+ ++W  +  S V P+     + +  P F+ Y Q
Sbjct:   189 --CKSYQKLISEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQ 229


>MGI|MGI:1921520 [details] [associations]
            symbol:Usp20 "ubiquitin specific peptidase 20" species:10090
            "Mus musculus" [GO:0001664 "G-protein coupled receptor binding"
            evidence=ISO] [GO:0004197 "cysteine-type endopeptidase activity"
            evidence=ISO] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0005575 "cellular_component" evidence=ND]
            [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006508 "proteolysis"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA]
            [GO:0008233 "peptidase activity" evidence=IEA] [GO:0008234
            "cysteine-type peptidase activity" evidence=IEA] [GO:0008270 "zinc
            ion binding" evidence=IEA] [GO:0008277 "regulation of G-protein
            coupled receptor protein signaling pathway" evidence=ISO]
            [GO:0016579 "protein deubiquitination" evidence=ISO] [GO:0016787
            "hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
            evidence=IEA] [GO:0070536 "protein K63-linked deubiquitination"
            evidence=ISO] [GO:0071108 "protein K48-linked deubiquitination"
            evidence=ISO] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR006615 InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148
            Pfam:PF06337 PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50235
            PROSITE:PS50271 PROSITE:PS51283 SMART:SM00695 MGI:MGI:1921520
            GO:GO:0048471 GO:GO:0046872 GO:GO:0008270 GO:GO:0006897
            Gene3D:3.30.40.10 InterPro:IPR013083 GO:GO:0006511 EMBL:CH466542
            GO:GO:0008277 GO:GO:0071108 GO:GO:0070536 GO:GO:0004197
            GO:GO:0004221 EMBL:AL844546 HSSP:Q93009 eggNOG:COG5560 CTD:10868
            GeneTree:ENSGT00690000101718 HOGENOM:HOG000286031
            HOVERGEN:HBG054196 KO:K11848 OMA:ADYGQIS OrthoDB:EOG4D52WZ
            MEROPS:C19.025 EMBL:AF449715 EMBL:AK173083 EMBL:AK054279
            EMBL:AK163663 EMBL:BC079674 IPI:IPI00469997 RefSeq:NP_083122.1
            UniGene:Mm.346654 ProteinModelPortal:Q8C6M1 SMR:Q8C6M1
            PhosphoSite:Q8C6M1 PRIDE:Q8C6M1 Ensembl:ENSMUST00000102849
            Ensembl:ENSMUST00000170476 GeneID:74270 KEGG:mmu:74270
            UCSC:uc008jde.2 InParanoid:Q8C6M1 NextBio:340299 Bgee:Q8C6M1
            Genevestigator:Q8C6M1 Uniprot:Q8C6M1
        Length = 916

 Score = 101 (40.6 bits), Expect = 0.00034, P = 0.00034
 Identities = 27/103 (26%), Positives = 47/103 (45%)

Query:    52 SEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXX 111
             SE  D  D+   RG+ G++NLGN+C+M+A +Q+L     L ++F                
Sbjct:   132 SESED--DDLKPRGLTGMKNLGNSCYMNAALQALSNCPPLTQFFLECGGLVRTDKKPAL- 188

Query:   112 XXVDEFALLVRKMWSGQY-SIVHPSDFKQILGVHYPQFKDYRQ 153
                  +  L+ ++W  +  S V P+     + +  P F+ Y Q
Sbjct:   189 --CKSYQKLISEVWHKKRPSYVVPTSLSHGIKLVNPMFRGYAQ 229


>MGI|MGI:3045318 [details] [associations]
            symbol:Usp44 "ubiquitin specific peptidase 44" species:10090
            "Mus musculus" [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=ISO] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006508
            "proteolysis" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0007049 "cell cycle"
            evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0008233
            "peptidase activity" evidence=IEA] [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0008270 "zinc ion binding"
            evidence=IEA] [GO:0016579 "protein deubiquitination" evidence=ISO]
            [GO:0016787 "hydrolase activity" evidence=IEA] [GO:0043161
            "proteasomal ubiquitin-dependent protein catabolic process"
            evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
            [GO:0051301 "cell division" evidence=IEA] [GO:0051322 "anaphase"
            evidence=ISO] [GO:0060564 "negative regulation of mitotic
            anaphase-promoting complex activity" evidence=ISO] [GO:0090231
            "regulation of spindle checkpoint" evidence=ISO] [GO:0090266
            "regulation of mitotic cell cycle spindle assembly checkpoint"
            evidence=IDA] InterPro:IPR001394 InterPro:IPR001607
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF02148 PROSITE:PS50271
            MGI:MGI:3045318 GO:GO:0005634 GO:GO:0043161 GO:GO:0051301
            GO:GO:0007067 GO:GO:0046872 GO:GO:0008270 Gene3D:3.30.40.10
            InterPro:IPR013083 GO:GO:0090266 GO:GO:0004843 GO:GO:0016579
            GO:GO:0004221 GO:GO:0051322 GO:GO:0060564 CTD:84101
            HOGENOM:HOG000015084 KO:K11834 HOVERGEN:HBG018027 OrthoDB:EOG4XGZZK
            EMBL:AK088109 EMBL:CJ236846 EMBL:AC124686 EMBL:BC111886
            IPI:IPI00224757 RefSeq:NP_001193780.1 UniGene:Mm.276331
            ProteinModelPortal:Q8C2S0 SMR:Q8C2S0 STRING:Q8C2S0
            PhosphoSite:Q8C2S0 GeneID:327799 KEGG:mmu:327799 UCSC:uc011xlw.1
            eggNOG:KOG1867 InParanoid:Q8C2S0 NextBio:397964 Bgee:Q8C2S0
            Genevestigator:Q8C2S0 Uniprot:Q8C2S0
        Length = 711

 Score = 87 (35.7 bits), Expect = 0.00049, Sum P(2) = 0.00049
 Identities = 25/75 (33%), Positives = 39/75 (52%)

Query:    14 STASAASSFPIPL---PPPTSSDVCEGPENFTGELSSLFEISEDNDVSDNCAQRGVCGLR 70
             S+  AA+   +P+   PPP +S   +     T E  +  ++S+           GV GLR
Sbjct:   216 SSEEAATIEIVPVRAPPPPPASPAKDKAALPTSEDRTFKKVSDSLIKRRPMVTPGVTGLR 275

Query:    71 NLGNTCFMSAGIQSL 85
             NLGNTC+M++ +Q L
Sbjct:   276 NLGNTCYMNSVLQVL 290

 Score = 58 (25.5 bits), Expect = 0.00049, Sum P(2) = 0.00049
 Identities = 12/38 (31%), Positives = 20/38 (52%)

Query:   116 EFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             E  +L + MWSG++++V P      +    P F+ Y Q
Sbjct:   383 ELHILFQVMWSGEWALVSPFAMLHSVWRLIPAFRGYAQ 420


>FB|FBgn0036913 [details] [associations]
            symbol:CG8334 species:7227 "Drosophila melanogaster"
            [GO:0004843 "ubiquitin-specific protease activity" evidence=ISS]
            [GO:0006511 "ubiquitin-dependent protein catabolic process"
            evidence=IEA] [GO:0004221 "ubiquitin thiolesterase activity"
            evidence=IEA] [GO:0005509 "calcium ion binding" evidence=IEA]
            InterPro:IPR001125 InterPro:IPR001394 InterPro:IPR002048
            InterPro:IPR006615 InterPro:IPR011992 InterPro:IPR018200
            Pfam:PF00443 Pfam:PF06337 Pfam:PF13499 PRINTS:PR00450
            PROSITE:PS00972 PROSITE:PS00973 PROSITE:PS50222 PROSITE:PS50235
            PROSITE:PS51283 SMART:SM00054 SMART:SM00695 Prosite:PS00018
            EMBL:AE014296 GO:GO:0008234 GO:GO:0005509 Gene3D:1.10.238.10
            InterPro:IPR018247 GO:GO:0006511 GO:GO:0004221 KO:K11837
            GeneTree:ENSGT00680000099843 RefSeq:NP_649153.1 UniGene:Dm.15133
            ProteinModelPortal:Q9VW49 SMR:Q9VW49 MEROPS:C19.A48
            EnsemblMetazoa:FBtr0074890 GeneID:40169 KEGG:dme:Dmel_CG8334
            UCSC:CG8334-RA FlyBase:FBgn0036913 InParanoid:Q9VW49 OMA:QFWYLIS
            OrthoDB:EOG43TX9J PhylomeDB:Q9VW49 GenomeRNAi:40169 NextBio:817379
            ArrayExpress:Q9VW49 Bgee:Q9VW49 Uniprot:Q9VW49
        Length = 1736

 Score = 102 (41.0 bits), Expect = 0.00055, P = 0.00055
 Identities = 25/87 (28%), Positives = 38/87 (43%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEYFT---NXXXXXXXXXXXXXXXXVDEFALLV 121
             G  GL NLGNTCFM+A +Q L     L +YF    +                   +A L+
Sbjct:   675 GATGLHNLGNTCFMNAALQVLFNTQPLAQYFQREMHRFEVNAANKLGTKGQLAMRYAELL 734

Query:   122 RKMWSGQYSIVHPSDFKQILGVHYPQF 148
             +++W+     V P   +  +  + PQF
Sbjct:   735 KEVWTATTRSVAPLKLRFCVNKYAPQF 761


>UNIPROTKB|F1PGC7 [details] [associations]
            symbol:USP31 "Ubiquitin carboxyl-terminal hydrolase"
            species:9615 "Canis lupus familiaris" [GO:0008234 "cysteine-type
            peptidase activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent
            protein catabolic process" evidence=IEA] [GO:0004221 "ubiquitin
            thiolesterase activity" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 PROSITE:PS00973
            PROSITE:PS50235 GO:GO:0008234 GO:GO:0006511 GO:GO:0004221
            OMA:SYQEPSD GeneTree:ENSGT00680000099843 EMBL:AAEX03004452
            EMBL:AAEX03004453 Ensembl:ENSCAFT00000028068 Uniprot:F1PGC7
        Length = 1270

 Score = 85 (35.0 bits), Expect = 0.00065, Sum P(2) = 0.00065
 Identities = 17/30 (56%), Positives = 19/30 (63%)

Query:    65 GVCGLRNLGNTCFMSAGIQSLVAASALVEY 94
             GV GLRN GNTCFM+A +Q L       EY
Sbjct:    43 GVAGLRNHGNTCFMNATLQCLSNTELFAEY 72

 Score = 65 (27.9 bits), Expect = 0.00065, Sum P(2) = 0.00065
 Identities = 13/39 (33%), Positives = 23/39 (58%)

Query:   115 DEFALLVRKMWSGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             ++ A LVR +W+ +Y+  H  DFK I+  +  Q++   Q
Sbjct:   105 EQLAHLVRALWTLEYTPQHSRDFKSIVSKNALQYRGNSQ 143


>UNIPROTKB|K7ESK0 [details] [associations]
            symbol:USP22 "Ubiquitin carboxyl-terminal hydrolase 22"
            species:9606 "Homo sapiens" [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0006511 "ubiquitin-dependent protein
            catabolic process" evidence=IEA] InterPro:IPR001394
            InterPro:IPR018200 Pfam:PF00443 PROSITE:PS00972 EMBL:AC087393
            HGNC:HGNC:12621 Ensembl:ENST00000584538 Uniprot:K7ESK0
        Length = 107

 Score = 85 (35.0 bits), Expect = 0.00073, P = 0.00072
 Identities = 20/52 (38%), Positives = 29/52 (55%)

Query:    44 ELSSLFEISEDNDVSDNCAQRGVCGLRNLGNTCFMSAGIQSLVAASALVEYF 95
             EL  L    +   ++ NC   G+ GL NLGNTCFM+  +Q+L     L ++F
Sbjct:    49 ELELLKHNPKRRKITSNCTI-GLRGLINLGNTCFMNCIVQALTHTPLLRDFF 99


>ASPGD|ASPL0000007671 [details] [associations]
            symbol:AN6354 species:162425 "Emericella nidulans"
            [GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
            evidence=IEA] [GO:0004843 "ubiquitin-specific protease activity"
            evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
            process" evidence=IEA] [GO:0004221 "ubiquitin thiolesterase
            activity" evidence=IEA] [GO:0016579 "protein deubiquitination"
            evidence=IEA] InterPro:IPR001394 InterPro:IPR006615
            InterPro:IPR018200 Pfam:PF00443 Pfam:PF06337 PROSITE:PS00972
            PROSITE:PS00973 PROSITE:PS50235 PROSITE:PS51283 SMART:SM00695
            GO:GO:0008234 EMBL:AACD01000107 EMBL:BN001301 GO:GO:0006511
            GO:GO:0004221 eggNOG:COG5560 KO:K11835 OrthoDB:EOG4FR40X
            RefSeq:XP_663958.1 ProteinModelPortal:Q5AZC6
            EnsemblFungi:CADANIAT00006630 GeneID:2871251 KEGG:ani:AN6354.2
            HOGENOM:HOG000166458 OMA:CVRSVEE Uniprot:Q5AZC6
        Length = 1418

 Score = 99 (39.9 bits), Expect = 0.00074, Sum P(2) = 0.00074
 Identities = 29/95 (30%), Positives = 42/95 (44%)

Query:    64 RGVCGLRNLGNTCFMSAGIQSLVAASALVEYFTNXXXXXXXXXXXXXXXXVD---EFALL 120
             RG  GL NLGNTC+M++ +Q + +   L  YF N                 D    +A L
Sbjct:   457 RGNTGLSNLGNTCYMNSALQCVRSVEELTYYFLNDVYKKDLNPSNPLAHNGDVAKAYANL 516

Query:   121 VRKMW--SGQYSIVHPSDFKQILGVHYPQFKDYRQ 153
             +R ++  +G  S   P   K  +G + P F  Y Q
Sbjct:   517 LRNIYDEAGHGSFA-PRQLKNTIGRYGPAFSGYGQ 550

 Score = 35 (17.4 bits), Expect = 0.00074, Sum P(2) = 0.00074
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query:    14 STASAASSFPIPLPPPTSSDVCEG-PENFTGELSSL 48
             S + A S    P+P P      +G P   TG LS+L
Sbjct:   431 SKSPATSGRSSPVPEPIRKTRKDGKPRGNTG-LSNL 465


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.318   0.133   0.408    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      154       138   0.00091  102 3  11 22  0.44    31
                                                     30  0.45    33


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  155
  No. of states in DFA:  589 (63 KB)
  Total size of DFA:  152 KB (2091 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  14.72u 0.07s 14.79t   Elapsed:  00:00:06
  Total cpu time:  14.74u 0.07s 14.81t   Elapsed:  00:00:06
  Start:  Thu Aug 15 17:04:07 2013   End:  Thu Aug 15 17:04:13 2013
WARNINGS ISSUED:  1

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