RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy7185
(311 letters)
>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex;
1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*
Length = 190
Score = 178 bits (453), Expect = 1e-55
Identities = 76/166 (45%), Positives = 94/166 (56%), Gaps = 5/166 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C CGKSF R L H RTHTGEKP+ C C K FS L H+R H+GE+P+ CP C
Sbjct: 24 CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83
Query: 206 FKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGA 265
K+F+ +NL H+ TH +KP+ C CGKSF +LR H +H+G PYK
Sbjct: 84 GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP-----E 138
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
CGKSF NL TH +H+G PYKC C K F++ L H H
Sbjct: 139 CGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184
Score = 166 bits (423), Expect = 3e-51
Identities = 66/160 (41%), Positives = 84/160 (52%), Gaps = 5/160 (3%)
Query: 152 SFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTA 211
S S GEKP+ C C K FS S L H+R H+GE+P+ CP C K+F+
Sbjct: 2 SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 212 SSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFP 271
+L H+ TH +KP+KC CGKSF NLR H +H+G PY CGKSF
Sbjct: 62 KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACP-----ECGKSFS 116
Query: 272 TPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+LR H +H+G PYKC C K F++ NL H H
Sbjct: 117 QLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTH 156
Score = 153 bits (390), Expect = 3e-46
Identities = 65/140 (46%), Positives = 83/140 (59%), Gaps = 5/140 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C CGKSF L RH RTHTGEKP+ C C K FS ++L H+R H+GE+P+ CP C
Sbjct: 52 CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC 111
Query: 206 FKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGA 265
K+F+ ++L H+ TH +KP+KC CGKSF NL TH +H+G PYK
Sbjct: 112 GKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP-----E 166
Query: 266 CGKSFPTPGNLRTHSYSHSG 285
CGKSF L H +H+G
Sbjct: 167 CGKSFSRRDALNVHQRTHTG 186
Score = 110 bits (278), Expect = 1e-29
Identities = 39/82 (47%), Positives = 52/82 (63%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C CGKSF + + L+ H RTHTGEKP+ C C K FS +L+TH+R H+GE+P+ CP C
Sbjct: 108 CPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPEC 167
Query: 206 FKTFTASSNLYYHRITHVKDKP 227
K+F+ L H+ TH K
Sbjct: 168 GKSFSRRDALNVHQRTHTGKKT 189
>1tf6_A Protein (transcription factor IIIA); complex (transcription
regulation/DNA), RNA polymerase III, transcription
initiation, zinc finger protein; HET: DNA; 3.10A
{Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A
Length = 190
Score = 163 bits (414), Expect = 6e-50
Identities = 50/172 (29%), Positives = 72/172 (41%), Gaps = 12/172 (6%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCD--VCSKGFSTSSSLNTHRRIHSGERPHVC--PI 204
CG ++++ L+ H HTGEKP C C KGF++ L H H+GE+ C
Sbjct: 20 CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 205 CFKTFTASSNLYYHRITH--VKDKPHKCGA--CGKSFPTPGNLRTHSYSHSGSWPYKIHA 260
C FT +N+ H +K + C CGK+F L+ H +SH+ PY+
Sbjct: 80 CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC-- 137
Query: 261 PSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHM-TIH 311
C K F P L+ H H+G K C + H+ H
Sbjct: 138 -PHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECH 188
Score = 151 bits (385), Expect = 1e-45
Identities = 46/160 (28%), Positives = 66/160 (41%), Gaps = 13/160 (8%)
Query: 162 HTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVC--PICFKTFTASSNLYY 217
K ++C C ++ + L H H+GE+P C C K FT+ +L
Sbjct: 3 EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62
Query: 218 HRITHVKDKPHKC--GACGKSFPTPGNLRTHSYSHSG--SWPYKIHAPSVGACGKSFPTP 273
H +TH +K C C F T N++ H Y H CGK+F
Sbjct: 63 HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFE---NCGKAFKKH 119
Query: 274 GNLRTHSYSHSGSWPYKCT--VCIKGFAKSSNLKNHMTIH 311
L+ H +SH+ PY+C C K F+ S LK H +H
Sbjct: 120 NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159
>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA
complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 155
Score = 137 bits (348), Expect = 2e-40
Identities = 44/153 (28%), Positives = 60/153 (39%), Gaps = 16/153 (10%)
Query: 146 CTVCGKSFDRPSLLKRH---TRTHTGEKPHVCDVC-----SKGFSTSSSLNTHRRIHSGE 197
C + FD L H H K VC + F L H R H+GE
Sbjct: 6 WDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE 65
Query: 198 RPHVCPI--CFKTFTASSNLYYHRITHVKDKPHKC--GACGKSFPTPGNLRTHSY-SHSG 252
+PH C C K+++ NL H +H +KP+ C C K+F + H +HS
Sbjct: 66 KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125
Query: 253 SWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
PY P C K + P +LR H + G
Sbjct: 126 EKPYVCKLPG---CTKRYTDPSSLRKHVKTVHG 155
Score = 133 bits (336), Expect = 1e-38
Identities = 47/156 (30%), Positives = 63/156 (40%), Gaps = 16/156 (10%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTH---RRIHSGERPHVC-----PICFKTFTASSNLYYHRI 220
E D CS+ F + L H IH + VC + F A L H
Sbjct: 1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60
Query: 221 THVKDKPHKCGA--CGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRT 278
H +KPHKC C KS+ NL+TH SH+G PY C K+F +
Sbjct: 61 RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG---CSKAFSNASDRAK 117
Query: 279 HSY-SHSGSWPYKCTV--CIKGFAKSSNLKNHMTIH 311
H +HS PY C + C K + S+L+ H+
Sbjct: 118 HQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153
>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the
cerebellum 3, disease mutation, DNA-binding,
metal-binding, nucleus, polymorphism; NMR {Homo sapiens}
Length = 155
Score = 136 bits (345), Expect = 5e-40
Identities = 36/155 (23%), Positives = 51/155 (32%), Gaps = 14/155 (9%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHV------- 201
G S + C + FST L TH + P
Sbjct: 3 SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62
Query: 202 --CPICFKTFTASSNLYYHRITHVKDKPHKCGA--CGKSFPTPGNLRTHSYSHSGSWPYK 257
CP K+F A L H H +KP C CGK F NL+ H +H+G P+K
Sbjct: 63 EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122
Query: 258 IHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
C + F + + H + H+ +
Sbjct: 123 CEFEG---CDRRFANSSDRKKHMHVHTSDKSGPSS 154
Score = 125 bits (316), Expect = 1e-35
Identities = 35/126 (27%), Positives = 47/126 (37%), Gaps = 13/126 (10%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPHV---------CDVCSKGFSTSSSLNTHRRIHS 195
P C ++F L H P C K F L H R+H+
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 196 GERPHVCPI--CFKTFTASSNLYYHRITHVKDKPHKCGA--CGKSFPTPGNLRTHSYSHS 251
GE+P CP C K F S NL H+ TH +KP KC C + F + + H + H+
Sbjct: 87 GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146
Query: 252 GSWPYK 257
Sbjct: 147 SDKSGP 152
Score = 115 bits (289), Expect = 9e-32
Identities = 35/102 (34%), Positives = 45/102 (44%), Gaps = 4/102 (3%)
Query: 133 KAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDV--CSKGFSTSSSLNTH 190
++ + C GKSF L H R HTGEKP C C K F+ S +L H
Sbjct: 52 GPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIH 111
Query: 191 RRIHSGERPHVCPI--CFKTFTASSNLYYHRITHVKDKPHKC 230
+R H+GE+P C C + F SS+ H H DK
Sbjct: 112 KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153
Score = 56.9 bits (138), Expect = 3e-10
Identities = 17/90 (18%), Positives = 26/90 (28%), Gaps = 14/90 (15%)
Query: 231 GACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYK 290
G+ G S + + +C ++F T L TH P +
Sbjct: 1 GSSGSSGQPIKQELSCKWIDEAQLSRPKK-----SCDRTFSTMHELVTHVTMEHVGGPEQ 55
Query: 291 ---------CTVCIKGFAKSSNLKNHMTIH 311
C K F L NH+ +H
Sbjct: 56 NNHVCYWEECPREGKSFKAKYKLVNHIRVH 85
>1ubd_C Protein (YY1 zinc finger domain); transcription initiation,
initiator element, zinc finger protein, DNA- protein
recognition; HET: DNA; 2.50A {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*
Length = 124
Score = 133 bits (337), Expect = 3e-39
Identities = 41/117 (35%), Positives = 58/117 (49%), Gaps = 5/117 (4%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPI 204
P C K F S +++H TH G + HVC C K F SS L H+ +H+GE+P C
Sbjct: 9 PHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTF 67
Query: 205 --CFKTFTASSNLYYHRITHVKDKPHKCGA--CGKSFPTPGNLRTHSYSHSGSWPYK 257
C K F+ NL H H D+P+ C C K F NL++H +H+ + +
Sbjct: 68 EGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124
Score = 113 bits (285), Expect = 1e-31
Identities = 48/147 (32%), Positives = 62/147 (42%), Gaps = 36/147 (24%)
Query: 169 EKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDK 226
+ C C+K F +S++ H H G R HVC C K F SS L H++ H +K
Sbjct: 3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 227 PHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGS 286
P +C G CGK F NLRTH H+G
Sbjct: 62 PFQCTFEG-------------------------------CGKRFSLDFNLRTHVRIHTGD 90
Query: 287 WPYKCTV--CIKGFAKSSNLKNHMTIH 311
PY C C K FA+S+NLK+H+ H
Sbjct: 91 RPYVCPFDGCNKKFAQSTNLKSHILTH 117
>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET:
DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*
Length = 119
Score = 130 bits (329), Expect = 4e-38
Identities = 40/102 (39%), Positives = 53/102 (51%), Gaps = 4/102 (3%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVCPICF 206
C K + + S L+ H+R HTGEKP+ CD C + FS S L H+R H+G +P C C
Sbjct: 14 CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 207 KTFTASSNLYYHRITHVKDKPHKCGA--CGKSFPTPGNLRTH 246
+ F+ S +L H TH +KP C C K F L H
Sbjct: 74 RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115
Score = 118 bits (299), Expect = 1e-33
Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 7/117 (5%)
Query: 167 TGEKPHVCD--VCSKGFSTSSSLNTHRRIHSGERPHVCPI--CFKTFTASSNLYYHRITH 222
+ ++P +C C+K + S L H R H+GE+P+ C C + F+ S L H+ H
Sbjct: 2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 223 VKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTH 279
KP +C C + F +L+TH+ +H+G P+ PS C K F L H
Sbjct: 62 TGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS---CQKKFARSDELVRH 115
Score = 108 bits (273), Expect = 9e-30
Identities = 35/76 (46%), Positives = 39/76 (51%), Gaps = 2/76 (2%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC--PICF 206
C + F R LKRH R HTG KP C C + FS S L TH R H+GE+P C P C
Sbjct: 44 CERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQ 103
Query: 207 KTFTASSNLYYHRITH 222
K F S L H H
Sbjct: 104 KKFARSDELVRHHNMH 119
>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Mus musculus} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1
Length = 124
Score = 126 bits (318), Expect = 2e-36
Identities = 34/104 (32%), Positives = 50/104 (48%), Gaps = 3/104 (2%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRR---IHSGERPHVC 202
C C K F LK H R HTGEKP C C K + +L H ++ E+ C
Sbjct: 10 CPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69
Query: 203 PICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTH 246
+C +TF L H ++H + P+KC +C + F +L++H
Sbjct: 70 SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113
Score = 118 bits (298), Expect = 2e-33
Identities = 35/117 (29%), Positives = 51/117 (43%), Gaps = 8/117 (6%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYH---RITH 222
+G C C K F + L H R H+GE+P CP C K + NL H +
Sbjct: 2 SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMN 61
Query: 223 VKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTH 279
++ C C ++F LR H SH+G PYK +C + F +L++H
Sbjct: 62 RSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCS-----SCSQQFMQKKDLQSH 113
Score = 79.1 bits (196), Expect = 1e-18
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGER 198
C+VC ++F R L+ H +HTGE P+ C CS+ F L +H ++HSG
Sbjct: 69 CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122
>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein,
DNA- binding, transcription, C2H2-type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1 g.37.1.1
Length = 96
Score = 124 bits (314), Expect = 4e-36
Identities = 41/86 (47%), Positives = 44/86 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C VCGK F R LK H R HTG KP+ C C + SSSLN H RIHS ERP C IC
Sbjct: 11 CEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQIC 70
Query: 206 FKTFTASSNLYYHRITHVKDKPHKCG 231
SS L H +H D G
Sbjct: 71 PYASRNSSQLTVHLRSHTGDSGPSSG 96
Score = 119 bits (301), Expect = 3e-34
Identities = 31/93 (33%), Positives = 41/93 (44%)
Query: 165 THTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVK 224
+ PH C+VC K FS L TH R H+G +P+ C C SS+L H H
Sbjct: 2 SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSD 61
Query: 225 DKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
++P KC C + L H SH+G
Sbjct: 62 ERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS 94
Score = 58.6 bits (143), Expect = 2e-11
Identities = 25/63 (39%), Positives = 30/63 (47%), Gaps = 5/63 (7%)
Query: 249 SHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHM 308
S S P+K CGK F L+TH H+G PYKC C A SS+L H+
Sbjct: 2 SSGSSGPHKCEV-----CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHL 56
Query: 309 TIH 311
IH
Sbjct: 57 RIH 59
>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Mus musculus} SCOP:
k.12.1.1
Length = 106
Score = 124 bits (313), Expect = 7e-36
Identities = 34/101 (33%), Positives = 44/101 (43%)
Query: 157 SLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLY 216
S +K +C C + F+ S +L H R H+ ERP+ C IC K F +L
Sbjct: 3 SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62
Query: 217 YHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
HR H K+KP KC CGK F L H H +
Sbjct: 63 DHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPT 103
Score = 117 bits (297), Expect = 2e-33
Identities = 33/87 (37%), Positives = 43/87 (49%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C CG+ F + L H RTHT E+P+ CD+C K F L HR IHS E+P C C
Sbjct: 20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 206 FKTFTASSNLYYHRITHVKDKPHKCGA 232
K F S L H+ H++ +
Sbjct: 80 GKGFCQSRTLAVHKTLHMQTSSPTAAS 106
Score = 104 bits (262), Expect = 3e-28
Identities = 33/109 (30%), Positives = 45/109 (41%), Gaps = 5/109 (4%)
Query: 184 SSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNL 243
SS + R ++ +C C + FT S NL H TH ++P+ C C K+F +L
Sbjct: 2 SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61
Query: 244 RTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
R H Y HS P+K CGK F L H H +
Sbjct: 62 RDHRYIHSKEKPFKCQ-----ECGKGFCQSRTLAVHKTLHMQTSSPTAA 105
>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB
domain containing protein 22B, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 110
Score = 121 bits (306), Expect = 8e-35
Identities = 30/97 (30%), Positives = 42/97 (43%), Gaps = 2/97 (2%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKT 208
CGKSF S RH H G +P+ C VC K F L H +IH+G +P+ C IC K
Sbjct: 15 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 209 FTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRT 245
F + HR K ++ ++ +
Sbjct: 75 FMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPSS 109
Score = 114 bits (288), Expect = 5e-32
Identities = 28/115 (24%), Positives = 46/115 (40%), Gaps = 8/115 (6%)
Query: 164 RTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHV 223
+G+K + C C K F+ S + H +H G RP+ C +C K F +L H H
Sbjct: 3 SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHT 61
Query: 224 KDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRT 278
KP++C C K F + H + S + Y+ ++ +
Sbjct: 62 GIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAA-----KAEQNTTEASGPSS 109
Score = 97.5 bits (244), Expect = 1e-25
Identities = 23/70 (32%), Positives = 33/70 (47%), Gaps = 2/70 (2%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C VCGK F L H + HTG KP+ C++C+K F S HR + S + +
Sbjct: 40 CGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKA 97
Query: 206 FKTFTASSNL 215
+ T +S
Sbjct: 98 EQNTTEASGP 107
Score = 54.8 bits (133), Expect = 6e-10
Identities = 23/63 (36%), Positives = 24/63 (38%), Gaps = 6/63 (9%)
Query: 249 SHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHM 308
SG Y CGKSF H H G PY C VC K F +L HM
Sbjct: 4 GSSGDKLYPCQ------CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHM 57
Query: 309 TIH 311
IH
Sbjct: 58 KIH 60
>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding
protein, transcription/DNA complex; HET: DNA; 1.60A {Mus
musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A
1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A*
1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C
Length = 90
Score = 113 bits (285), Expect = 5e-32
Identities = 32/78 (41%), Positives = 42/78 (53%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKT 208
C + F + L RH R HTG+KP C +C + FS S L TH R H+GE+P C IC +
Sbjct: 12 CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 209 FTASSNLYYHRITHVKDK 226
F S H H++ K
Sbjct: 72 FARSDERKRHTKIHLRQK 89
Score = 101 bits (253), Expect = 3e-27
Identities = 33/86 (38%), Positives = 46/86 (53%), Gaps = 2/86 (2%)
Query: 169 EKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDK 226
E+P+ C V C + FS S SL H RIH+G++P C IC + F+ S +L H TH +K
Sbjct: 2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 227 PHKCGACGKSFPTPGNLRTHSYSHSG 252
P C CG+ F + H+ H
Sbjct: 62 PFACDICGRKFARSDERKRHTKIHLR 87
Score = 90.6 bits (226), Expect = 3e-23
Identities = 22/53 (41%), Positives = 31/53 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
C +C ++F R L H RTHTGEKP CD+C + F+ S H +IH ++
Sbjct: 37 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89
>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1 g.37.1.1
Length = 95
Score = 108 bits (272), Expect = 5e-30
Identities = 30/83 (36%), Positives = 42/83 (50%), Gaps = 2/83 (2%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHV-- 223
+G C++C K F LN H+ HSGE+P+ CP+C F + YH +H
Sbjct: 2 SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61
Query: 224 KDKPHKCGACGKSFPTPGNLRTH 246
KP+ C +CGK F P +L H
Sbjct: 62 VGKPYICQSCGKGFSRPDHLNGH 84
Score = 103 bits (259), Expect = 4e-28
Identities = 29/80 (36%), Positives = 41/80 (51%), Gaps = 3/80 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE--RPHVCP 203
C +CGK F L RH +H+GEKP+ C VC F ++ H R H G +P++C
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 204 ICFKTFTASSNLYYH-RITH 222
C K F+ +L H + H
Sbjct: 70 SCGKGFSRPDHLNGHIKQVH 89
Score = 78.7 bits (195), Expect = 9e-19
Identities = 24/56 (42%), Positives = 31/56 (55%), Gaps = 3/56 (5%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE--KPHVCDVCSKGFSTSSSLNTH-RRIHSGER 198
C VCG F R + H R+H G KP++C C KGFS LN H +++HSG
Sbjct: 38 CPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93
Score = 75.2 bits (186), Expect = 2e-17
Identities = 31/89 (34%), Positives = 38/89 (42%), Gaps = 8/89 (8%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
C CGK F +L H SHSG PY CG F + H SH G
Sbjct: 6 SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP-----VCGLRFKRKDRMSYHVRSHDG 60
Query: 286 SW--PYKCTVCIKGFAKSSNLKNHM-TIH 311
S PY C C KGF++ +L H+ +H
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGHIKQVH 89
Score = 58.7 bits (143), Expect = 2e-11
Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 5/62 (8%)
Query: 250 HSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMT 309
SGS CGK F +L H SHSG PY C VC F + + H+
Sbjct: 2 SSGSSGVACEI-----CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR 56
Query: 310 IH 311
H
Sbjct: 57 SH 58
>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain,
protein-DNA complex, DNA-B metal-binding, nucleus; HET:
DNA; NMR {Rattus norvegicus}
Length = 82
Score = 107 bits (271), Expect = 7e-30
Identities = 34/77 (44%), Positives = 43/77 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C +CGKSF R S L H H+ +P+ C C K F S + H IH+GE+PH C +C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 206 FKTFTASSNLYYHRITH 222
K F+ SSNL H H
Sbjct: 64 GKAFSQSSNLITHSRKH 80
Score = 93.3 bits (233), Expect = 2e-24
Identities = 37/79 (46%), Positives = 46/79 (58%)
Query: 174 CDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGAC 233
C +C K F SS+L+TH IHS RP+ C C K F S++ H H +KPHKC C
Sbjct: 4 CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 234 GKSFPTPGNLRTHSYSHSG 252
GK+F NL THS H+G
Sbjct: 64 GKAFSQSSNLITHSRKHTG 82
Score = 82.5 bits (205), Expect = 2e-20
Identities = 30/51 (58%), Positives = 35/51 (68%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSG 196
C CGK F + S +K+HT HTGEKPH C VC K FS SS+L TH R H+G
Sbjct: 32 CQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82
Score = 32.4 bits (75), Expect = 0.024
Identities = 10/23 (43%), Positives = 14/23 (60%)
Query: 289 YKCTVCIKGFAKSSNLKNHMTIH 311
+ C +C K F +SS L H+ IH
Sbjct: 2 FDCKICGKSFKRSSTLSTHLLIH 24
>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine
zipper, X-RAY crystallography, structure-based design,
zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1
g.37.1.1 PDB: 1xf7_A
Length = 88
Score = 106 bits (267), Expect = 2e-29
Identities = 24/80 (30%), Positives = 35/80 (43%), Gaps = 4/80 (5%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C +C ++F R L H RTHTGEKP CD+C + F+ S HR I P +
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ-HILPILEDKV 64
Query: 206 FKTFTASSNLYYHRI---TH 222
+ + + +L
Sbjct: 65 EELLSKNYHLENEVARLKKL 84
Score = 97.2 bits (243), Expect = 9e-26
Identities = 24/77 (31%), Positives = 31/77 (40%), Gaps = 1/77 (1%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHK 229
KP C +C + FS S L TH R H+GE+P C IC + F S HR P
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPIL 60
Query: 230 CGACGKSFPTPGNLRTH 246
+ +L
Sbjct: 61 EDKVEELLSKNYHLENE 77
Score = 76.8 bits (190), Expect = 3e-18
Identities = 15/56 (26%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHR---RIHSGER 198
C +CG+ F R KRH P + D + S + L + GER
Sbjct: 34 CDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88
Score = 70.6 bits (174), Expect = 6e-16
Identities = 19/84 (22%), Positives = 34/84 (40%), Gaps = 6/84 (7%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
KP +C C ++F +L TH +H+G P+ CG+ F + H
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD-----ICGRKFARSDERKRHRDIQHI 56
Query: 286 SWPYKCTVCIKGFAKSSNLKNHMT 309
P + +K+ +L+N +
Sbjct: 57 L-PILEDKVEELLSKNYHLENEVA 79
Score = 59.8 bits (146), Expect = 7e-12
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
C ++F +L TH +H+G P+ C +C + FA+S K H I
Sbjct: 9 CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54
Score = 40.6 bits (96), Expect = 4e-05
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
P++C +C++ F++S +L H+ H
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTH 26
>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding,
transcription, metal-binding, DNA, protein, nucleus,
activator; 1.70A {Mus musculus} PDB: 2wbu_A
Length = 89
Score = 104 bits (263), Expect = 9e-29
Identities = 34/80 (42%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVC 202
CGK++ + S LK H RTHTGEKP+ CD C F+ S L H R H+G RP C
Sbjct: 9 DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68
Query: 203 PICFKTFTASSNLYYHRITH 222
C + F+ S +L H H
Sbjct: 69 QKCDRAFSRSDHLALHMKRH 88
Score = 93.4 bits (233), Expect = 2e-24
Identities = 26/87 (29%), Positives = 36/87 (41%), Gaps = 2/87 (2%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC--PICFKTFTASSNLYYHRITHV 223
T C K ++ SS L H R H+GE+P+ C C F S L H H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61
Query: 224 KDKPHKCGACGKSFPTPGNLRTHSYSH 250
+P +C C ++F +L H H
Sbjct: 62 GHRPFQCQKCDRAFSRSDHLALHMKRH 88
Score = 76.4 bits (189), Expect = 5e-18
Identities = 25/90 (27%), Positives = 38/90 (42%), Gaps = 3/90 (3%)
Query: 222 HVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSY 281
CGK++ +L+ H +H+G PY CG F L H
Sbjct: 2 RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDG---CGWKFARSDELTRHYR 58
Query: 282 SHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
H+G P++C C + F++S +L HM H
Sbjct: 59 KHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88
>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 86
Score = 104 bits (262), Expect = 1e-28
Identities = 24/83 (28%), Positives = 31/83 (37%), Gaps = 4/83 (4%)
Query: 159 LKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE----RPHVCPICFKTFTASSN 214
RTHTGEKP+ C C K F L+ H + + VC C KTFT +
Sbjct: 3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62
Query: 215 LYYHRITHVKDKPHKCGACGKSF 237
+ H + G S
Sbjct: 63 MARHADNCAGPDGVEGENSGPSS 85
Score = 87.2 bits (217), Expect = 4e-22
Identities = 14/68 (20%), Positives = 25/68 (36%), Gaps = 4/68 (5%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE----KPHVCDVCSKGFSTSSSLNTHRRIHSGERPHV 201
C+ C K+F + LL H + + VC C K F+ +++ H +G
Sbjct: 18 CSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVE 77
Query: 202 CPICFKTF 209
+
Sbjct: 78 GENSGPSS 85
Score = 83.3 bits (207), Expect = 1e-20
Identities = 22/89 (24%), Positives = 33/89 (37%), Gaps = 9/89 (10%)
Query: 186 SLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITH----VKDKPHKCGACGKSFPTPG 241
S + R H+GE+P+ C C KTF L H + C CGK+F
Sbjct: 2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61
Query: 242 NLRTHSYSHSGSWPYKIHAPSVGACGKSF 270
+ H+ + +G + G S
Sbjct: 62 TMARHADNCAGPDGVEGE-----NSGPSS 85
Score = 56.8 bits (138), Expect = 7e-11
Identities = 15/75 (20%), Positives = 26/75 (34%), Gaps = 9/75 (12%)
Query: 241 GNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSW----PYKCTVCIK 296
G+ + +H+G PY C K+F L H + + C+ C K
Sbjct: 1 GSSGSSGRTHTGEKPYACSH-----CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGK 55
Query: 297 GFAKSSNLKNHMTIH 311
F + + + H
Sbjct: 56 TFTRRNTMARHADNC 70
>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND,
transcription factor, kruppel-like factor, GC-box
promoter elements, structural genomics; NMR {Homo
sapiens}
Length = 100
Score = 101 bits (255), Expect = 2e-27
Identities = 31/76 (40%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVC--DVCSKGFSTSSSLNTHRRIHSGERPHVCPICF 206
C K + + S LK H RTHTGEKP+ C + C F+ S L H R H+G +P C +C
Sbjct: 23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 207 KTFTASSNLYYHRITH 222
++F+ S +L H H
Sbjct: 83 RSFSRSDHLALHMKRH 98
Score = 100 bits (251), Expect = 7e-27
Identities = 32/101 (31%), Positives = 42/101 (41%), Gaps = 6/101 (5%)
Query: 152 SFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC--PICFKTF 209
S R H + P C+K ++ SS L H R H+GE+P+ C C F
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57
Query: 210 TASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSH 250
S L H H KP +CG C +SF +L H H
Sbjct: 58 ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98
Score = 81.9 bits (203), Expect = 6e-20
Identities = 36/131 (27%), Positives = 51/131 (38%), Gaps = 35/131 (26%)
Query: 181 FSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTP 240
+S RRIH + P C K +T SS+L H TH +KP+KC
Sbjct: 3 SGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKC---------- 48
Query: 241 GNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAK 300
+W C F L H H+G+ P++C VC + F++
Sbjct: 49 ------------TWEG---------CDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSR 87
Query: 301 SSNLKNHMTIH 311
S +L HM H
Sbjct: 88 SDHLALHMKRH 98
Score = 56.1 bits (136), Expect = 2e-10
Identities = 22/78 (28%), Positives = 30/78 (38%), Gaps = 11/78 (14%)
Query: 236 SFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTV-- 293
S + G H +P C K + +L+ H +H+G PYKCT
Sbjct: 2 SSGSSGPDLEKRRIHYCDYPG---------CTKVYTKSSHLKAHLRTHTGEKPYKCTWEG 52
Query: 294 CIKGFAKSSNLKNHMTIH 311
C FA+S L H H
Sbjct: 53 CDWRFARSDELTRHYRKH 70
Score = 36.5 bits (85), Expect = 0.002
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHT 167
C VC +SF R L H + H
Sbjct: 78 CGVCNRSFSRSDHLALHMKRHQ 99
>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 79
Score = 97.6 bits (244), Expect = 5e-26
Identities = 21/77 (27%), Positives = 31/77 (40%), Gaps = 5/77 (6%)
Query: 166 HTGEKPHVCDV--CSKGFSTSSSLNTHRRI-HSGERPHVCP--ICFKTFTASSNLYYHRI 220
+G CD C + FS LN H++ H ++ CP C K+F +L H
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61
Query: 221 THVKDKPHKCGACGKSF 237
H + + C G S
Sbjct: 62 LHSDTRDYICEFSGPSS 78
Score = 93.4 bits (233), Expect = 2e-24
Identities = 19/70 (27%), Positives = 28/70 (40%), Gaps = 5/70 (7%)
Query: 145 PCTV--CGKSFDRPSLLKRHTR-THTGEKPHVCD--VCSKGFSTSSSLNTHRRIHSGERP 199
PC CG+ F L H + H +K C C K F+ L H ++HS R
Sbjct: 9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68
Query: 200 HVCPICFKTF 209
++C +
Sbjct: 69 YICEFSGPSS 78
Score = 70.7 bits (174), Expect = 5e-16
Identities = 22/108 (20%), Positives = 30/108 (27%), Gaps = 34/108 (31%)
Query: 194 HSGERPHVCPI--CFKTFTASSNLYYH-RITHVKDKPHKCGACGKSFPTPGNLRTHSYSH 250
SG C C + F+ L +H + H+ K C
Sbjct: 2 SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSC-------------------- 41
Query: 251 SGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGF 298
ACGKSF +L+ H HS + Y C
Sbjct: 42 -----------PEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78
Score = 58.3 bits (142), Expect = 2e-11
Identities = 20/65 (30%), Positives = 24/65 (36%), Gaps = 6/65 (9%)
Query: 250 HSGSWPYKIHAPSVGACGKSFPTPGNLRTHS-YSHSGSWPYKCT--VCIKGFAKSSNLKN 306
SGS P CG+ F L H Y H + C C K F +LK
Sbjct: 2 SSGSSGMPCDFPG---CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKE 58
Query: 307 HMTIH 311
HM +H
Sbjct: 59 HMKLH 63
>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 77
Score = 97.2 bits (243), Expect = 5e-26
Identities = 22/73 (30%), Positives = 29/73 (39%), Gaps = 3/73 (4%)
Query: 159 LKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE--RPHVCPICFKTFTASSNLY 216
RTH+GEKP+ C +C F+ S ++ H E CP C S+L
Sbjct: 3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62
Query: 217 YH-RITHVKDKPH 228
H R H P
Sbjct: 63 VHLRKQHSYSGPS 75
Score = 82.6 bits (205), Expect = 2e-20
Identities = 22/74 (29%), Positives = 28/74 (37%), Gaps = 3/74 (4%)
Query: 186 SLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHV--KDKPHKCGACGKSFPTPGNL 243
S + R HSGE+P+ C IC FT S + H + C C +L
Sbjct: 2 SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61
Query: 244 RTHS-YSHSGSWPY 256
H HS S P
Sbjct: 62 GVHLRKQHSYSGPS 75
Score = 81.4 bits (202), Expect = 5e-20
Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 3/58 (5%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE--KPHVCDVCSKGFSTSSSLNTH-RRIHSGERPH 200
C +C F + +K H E C C + S L H R+ HS P
Sbjct: 18 CYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75
Score = 63.7 bits (156), Expect = 2e-13
Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 8/74 (10%)
Query: 241 GNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSW--PYKCTVCIKGF 298
G+ + +HSG PY+ + C F G ++ H + C C
Sbjct: 1 GSSGSSGRTHSGEKPYECYI-----CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVI 55
Query: 299 AKSSNLKNHM-TIH 311
A+ S+L H+ H
Sbjct: 56 ARKSDLGVHLRKQH 69
>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN
domain containing protein 16, structural genomics,
NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1
Length = 77
Score = 96.4 bits (241), Expect = 1e-25
Identities = 26/73 (35%), Positives = 33/73 (45%)
Query: 157 SLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLY 216
R + + CD C K FS SS L+ HRR H+GE+P+ C C K F S+L
Sbjct: 4 GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63
Query: 217 YHRITHVKDKPHK 229
H H P
Sbjct: 64 GHHRVHTGSGPSS 76
Score = 84.4 bits (210), Expect = 4e-21
Identities = 29/55 (52%), Positives = 33/55 (60%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
C CGKSF S L +H RTHTGEKP+ CD C K F S L H R+H+G P
Sbjct: 21 CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75
Score = 84.4 bits (210), Expect = 4e-21
Identities = 28/74 (37%), Positives = 37/74 (50%)
Query: 184 SSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNL 243
S S R + C C K+F+ SS+L HR TH +KP+KC CGK+F +L
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62
Query: 244 RTHSYSHSGSWPYK 257
H H+GS P
Sbjct: 63 IGHHRVHTGSGPSS 76
Score = 57.1 bits (139), Expect = 4e-11
Identities = 26/100 (26%), Positives = 36/100 (36%), Gaps = 33/100 (33%)
Query: 212 SSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFP 271
S + + + +KC CGKSF SHS
Sbjct: 3 SGSSGRSEWQQRERRRYKCDECGKSF-----------SHSS------------------- 32
Query: 272 TPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+L H +H+G PYKC C K F + S+L H +H
Sbjct: 33 ---DLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69
>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast
structural genomics consortiu PSI-biology, protein
structure initiative; NMR {Homo sapiens}
Length = 74
Score = 95.6 bits (239), Expect = 2e-25
Identities = 23/72 (31%), Positives = 36/72 (50%)
Query: 157 SLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLY 216
H+ +KP+ CD C F +L +H+ +H+GE+P+ C IC F +NL
Sbjct: 3 HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62
Query: 217 YHRITHVKDKPH 228
H H +KP+
Sbjct: 63 THTRIHSGEKPY 74
Score = 86.0 bits (214), Expect = 1e-21
Identities = 25/55 (45%), Positives = 33/55 (60%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
C C SF L H HTGEKP+ C++C F+ ++L TH RIHSGE+P+
Sbjct: 20 CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74
Score = 84.8 bits (211), Expect = 3e-21
Identities = 25/73 (34%), Positives = 37/73 (50%)
Query: 184 SSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNL 243
+ H + ++P+ C C +F NL H+ H +KP++C CG F P NL
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61
Query: 244 RTHSYSHSGSWPY 256
+TH+ HSG PY
Sbjct: 62 KTHTRIHSGEKPY 74
Score = 66.3 bits (163), Expect = 2e-14
Identities = 30/78 (38%), Positives = 40/78 (51%), Gaps = 5/78 (6%)
Query: 212 SSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFP 271
+ ++H DKP+KC C SF GNL +H H+G PY+ + CG F
Sbjct: 2 GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCN-----ICGAQFN 56
Query: 272 TPGNLRTHSYSHSGSWPY 289
P NL+TH+ HSG PY
Sbjct: 57 RPANLKTHTRIHSGEKPY 74
>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 72
Score = 93.3 bits (233), Expect = 2e-24
Identities = 27/70 (38%), Positives = 38/70 (54%)
Query: 159 LKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYH 218
+ H+GEKP+ C C K FS SS L H+R+H+GE+P+ C C K F+ +S L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 219 RITHVKDKPH 228
+ H
Sbjct: 62 QRIHTSGPSS 71
Score = 85.2 bits (212), Expect = 2e-21
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
C CGK+F R S+L +H R HTGEKP+ C C K FS +S L H+RIH+
Sbjct: 17 CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71
Score = 75.2 bits (186), Expect = 9e-18
Identities = 26/70 (37%), Positives = 35/70 (50%)
Query: 187 LNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTH 246
+ IHSGE+P+ C C K F+ SS L H+ H +KP+KC CGK+F L H
Sbjct: 2 SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61
Query: 247 SYSHSGSWPY 256
H+
Sbjct: 62 QRIHTSGPSS 71
Score = 52.5 bits (127), Expect = 2e-09
Identities = 27/69 (39%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 243 LRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSS 302
S HSG PY CGK+F L H H+G PYKC C K F+++S
Sbjct: 2 SSGSSGIHSGEKPYGCVE-----CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNS 56
Query: 303 NLKNHMTIH 311
L NH IH
Sbjct: 57 GLINHQRIH 65
>2j7j_A Transcription factor IIIA; zinc finger module, alternative
initiation, nuclear protein, phosphorylation,
hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus
laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B
2hgh_A
Length = 85
Score = 91.5 bits (228), Expect = 1e-23
Identities = 23/81 (28%), Positives = 33/81 (40%), Gaps = 3/81 (3%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVC 202
CGK+F + + LK H +HT + P+ C C K FS S L H ++H+G
Sbjct: 5 HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 64
Query: 203 PICFKTFTASSNLYYH-RITH 222
C + H H
Sbjct: 65 DSCSFVGKTWTLYLKHVAECH 85
Score = 66.1 bits (162), Expect = 3e-14
Identities = 22/83 (26%), Positives = 32/83 (38%), Gaps = 5/83 (6%)
Query: 228 HKCGA--CGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+ C CGK+F L+ H +SH+ PY+ C K F P L+ H H+G
Sbjct: 2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEG---CDKRFSLPSRLKRHEKVHAG 58
Query: 286 SWPYKCTVCIKGFAKSSNLKNHM 308
K C + H+
Sbjct: 59 YPCKKDDSCSFVGKTWTLYLKHV 81
>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double
helix, transcription/DNA complex; HET: DNA; 2.80A
{Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1
Length = 66
Score = 88.4 bits (220), Expect = 1e-22
Identities = 18/61 (29%), Positives = 26/61 (42%), Gaps = 2/61 (3%)
Query: 164 RTHTGEKPHVCDVCSKGFSTSSSLNTHRRI--HSGERPHVCPICFKTFTASSNLYYHRIT 221
T GE + C VCS+ ++ S+ H + + CP CFK FT N+ H
Sbjct: 3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62
Query: 222 H 222
Sbjct: 63 I 63
Score = 77.2 bits (191), Expect = 2e-18
Identities = 14/53 (26%), Positives = 21/53 (39%), Gaps = 2/53 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTRT--HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSG 196
C VC + + S RH T K + C C K F+ ++ H +I
Sbjct: 13 CKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65
Score = 59.1 bits (144), Expect = 7e-12
Identities = 14/91 (15%), Positives = 22/91 (24%), Gaps = 31/91 (34%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHS 280
T + ++C C + + N H T
Sbjct: 4 TKEGEHTYRCKVCSRVYTHISNFCRH-----------------------------YVTSH 34
Query: 281 YSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
Y C C K F + N+ H+ I
Sbjct: 35 --KRNVKVYPCPFCFKEFTRKDNMTAHVKII 63
Score = 37.9 bits (89), Expect = 2e-04
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTG 168
PC C K F R + H +
Sbjct: 42 PCPFCFKEFTRKDNMTAHVKIIHK 65
>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 78
Score = 87.8 bits (218), Expect = 2e-22
Identities = 17/76 (22%), Positives = 27/76 (35%), Gaps = 4/76 (5%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHS---GERPHVCPICFKTFTASSNLYYH-RIT 221
+G C++C +SLN H+R H+ C C K F ++ H +
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61
Query: 222 HVKDKPHKCGACGKSF 237
H + G S
Sbjct: 62 HPALLLAPQESSGPSS 77
Score = 77.8 bits (192), Expect = 1e-18
Identities = 14/61 (22%), Positives = 20/61 (32%), Gaps = 3/61 (4%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHT---GEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
C +CG + + + L H R H C+ C K F S+ HR
Sbjct: 10 CEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAP 69
Query: 203 P 203
Sbjct: 70 Q 70
Score = 60.1 bits (146), Expect = 4e-12
Identities = 13/86 (15%), Positives = 22/86 (25%), Gaps = 30/86 (34%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+C CG + +L H R H+
Sbjct: 6 SGLQCEICGFTCRQKASLNWH-----------------------------QRKHA-ETVA 35
Query: 286 SWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ + C C K F K ++ H +
Sbjct: 36 ALRFPCEFCGKRFEKPDSVAAHRSKS 61
Score = 43.2 bits (102), Expect = 5e-06
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
SGS +C +C + ++L H H
Sbjct: 2 SSGSSGLQCEICGFTCRQKASLNWHQRKH 30
Score = 40.5 bits (95), Expect = 3e-05
Identities = 9/35 (25%), Positives = 12/35 (34%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSK 179
PC CGK F++P + H S
Sbjct: 40 PCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSG 74
>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA
binding, transcription, C2H2 type zinc finger,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 70
Score = 85.6 bits (213), Expect = 1e-21
Identities = 19/67 (28%), Positives = 25/67 (37%)
Query: 164 RTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHV 223
+ + P C CS S+ ++L H RIH +RP C C SNL H
Sbjct: 2 SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61
Query: 224 KDKPHKC 230
D
Sbjct: 62 GDMSGPS 68
Score = 81.0 bits (201), Expect = 5e-20
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCP 203
C+ C S + L+ H R H ++P C+ CS S+L+ H + G+
Sbjct: 12 CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69
Score = 59.8 bits (146), Expect = 4e-12
Identities = 19/63 (30%), Positives = 22/63 (34%), Gaps = 5/63 (7%)
Query: 249 SHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHM 308
S S P K C S + LR H H P+KC C + SNL HM
Sbjct: 3 SGSSGHPEK-----CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM 57
Query: 309 TIH 311
Sbjct: 58 KKF 60
>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces
cerevisiae} SCOP: g.37.1.1 g.37.1.1
Length = 60
Score = 82.9 bits (206), Expect = 1e-20
Identities = 24/53 (45%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGE 197
C VC ++F R LKRH R+HT EKP+ C +C++ F+ L H ++IHSG
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57
Score = 71.4 bits (176), Expect = 2e-16
Identities = 17/49 (34%), Positives = 27/49 (55%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYH 218
+ VC+VC++ F+ L H R H+ E+P+ C +C + FT L H
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49
Score = 47.9 bits (115), Expect = 5e-08
Identities = 15/47 (31%), Positives = 23/47 (48%), Gaps = 1/47 (2%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHM-TIH 311
C ++F +L+ H SH+ PY C +C + F + L H IH
Sbjct: 8 CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54
Score = 41.3 bits (98), Expect = 1e-05
Identities = 10/26 (38%), Positives = 15/26 (57%), Gaps = 1/26 (3%)
Query: 146 CTVCGKSFDRPSLLKRHT-RTHTGEK 170
C +C ++F R LL RH + H+G
Sbjct: 33 CGLCNRAFTRRDLLIRHAQKIHSGNL 58
Score = 38.2 bits (90), Expect = 1e-04
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
+ C VC + FA+ +LK H H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 54
Score = 74.9 bits (185), Expect = 6e-18
Identities = 17/50 (34%), Positives = 27/50 (54%), Gaps = 1/50 (2%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGERPHVCPICFKTFT 210
+ + KP++C C KGFS LN H +++H+ ERPH C + +
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 63.8 bits (156), Expect = 9e-14
Identities = 18/39 (46%), Positives = 21/39 (53%), Gaps = 1/39 (2%)
Query: 146 CTVCGKSFDRPSLLKRHT-RTHTGEKPHVCDVCSKGFST 183
C CGK F RP L H + HT E+PH C V G S+
Sbjct: 15 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53
Score = 59.9 bits (146), Expect = 2e-12
Identities = 13/50 (26%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYH-RITHVKDKPHKCGACGKSF 237
+ S +P++C C K F+ +L H + H ++PHKC
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51
Score = 45.3 bits (108), Expect = 5e-07
Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 6/56 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYS-HSGSWPYKCTVCIKGFA 299
+ S S PY + CGK F P +L H H+ P+KC V + G +
Sbjct: 2 SSGSSGSVGKPYICQS-----CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52
Score = 44.5 bits (106), Expect = 9e-07
Identities = 13/54 (24%), Positives = 19/54 (35%), Gaps = 6/54 (11%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYS-HSGSWPYKIHAPSVGACGKSF 270
+ KP+ C +CGK F P +L H H+ P+K
Sbjct: 3 SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ-----VWVSGP 51
Score = 42.2 bits (100), Expect = 5e-06
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHM-TIH 311
+ S S PY C C KGF++ +L H+ +H
Sbjct: 2 SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVH 36
>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc
finger, dimer, protein-DNA complex, cooperativity,
transcription/DNA complex; 2.35A {Mus musculus} SCOP:
g.37.1.1 g.37.1.1
Length = 73
Score = 74.3 bits (183), Expect = 2e-17
Identities = 24/70 (34%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 155 RPSLLKRHTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTAS 212
+ L + +P+ C V C + FS S L H RIH+G++P C IC + F+ S
Sbjct: 5 PMNNLLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRS 62
Query: 213 SNLYYHRITH 222
+L H TH
Sbjct: 63 DHLTTHIRTH 72
Score = 72.3 bits (178), Expect = 1e-16
Identities = 24/52 (46%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 146 CTV--CGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHS 195
C V C + F R L RH R HTG+KP C +C + FS S L TH R H+
Sbjct: 22 CPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73
Score = 50.8 bits (122), Expect = 6e-09
Identities = 18/75 (24%), Positives = 34/75 (45%), Gaps = 9/75 (12%)
Query: 243 LRTHSYSHSGSW------PYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIK 296
+ H ++ ++ PY S C + F L H H+G P++C +C++
Sbjct: 1 MEPHPMNNLLNYVVPKMRPYACPVES---CDRRFSRSDELTRHIRIHTGQKPFQCRICMR 57
Query: 297 GFAKSSNLKNHMTIH 311
F++S +L H+ H
Sbjct: 58 NFSRSDHLTTHIRTH 72
>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 72.1 bits (178), Expect = 6e-17
Identities = 16/42 (38%), Positives = 21/42 (50%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG KP+VC+ C K F + S L H R H+GE
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 55.6 bits (135), Expect = 7e-11
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
+ +G +P+VC C K F + S L H TH + G
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG 44
Score = 50.6 bits (122), Expect = 4e-09
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L HTRTHTGE
Sbjct: 15 CNECGKAFRSKSYLIIHTRTHTGESGPSS 43
Score = 41.7 bits (99), Expect = 7e-06
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP+ C CGK+F + L H+ +H+G
Sbjct: 3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPS 42
Score = 38.2 bits (90), Expect = 9e-05
Identities = 12/34 (35%), Positives = 14/34 (41%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C C K F S L H H
Sbjct: 2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY + CGK+F + L H+ +H+G
Sbjct: 2 SSGSSGTGMKPYVCNE-----CGKAFRSKSYLIIHTRTHTGESGPSS 43
>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 72.2 bits (178), Expect = 6e-17
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+VCD C K F S+ L H+RIH+GE+P
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 4e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SGE+P+VC C K F S+ L H+ H +KP
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + L RH R HTGEKP
Sbjct: 15 CDYCGKAFGLSAELVRHQRIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 3e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGK+F L H H+G P
Sbjct: 3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSG 42
Score = 39.4 bits (93), Expect = 4e-05
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PY C C K F S+ L H IH
Sbjct: 2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIH 35
Score = 33.6 bits (78), Expect = 0.004
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG PY CGK+F L H H+G P +
Sbjct: 2 SSGSSGSGEKPYVCDY-----CGKAFGLSAELVRHQRIHTGEKPSGPS 44
>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.8 bits (177), Expect = 1e-16
Identities = 17/42 (40%), Positives = 27/42 (64%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE+P++C VC K F+ S+L H++IH+GE+P
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 55.2 bits (134), Expect = 1e-10
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GERP++C +C K FT SNL H+ H +KP
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
Score = 48.6 bits (117), Expect = 2e-08
Identities = 18/35 (51%), Positives = 21/35 (60%), Gaps = 3/35 (8%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKG 180
CTVCGK+F S L +H + HTGEKP S G
Sbjct: 15 CTVCGKAFTDRSNLIKHQKIHTGEKPS---GPSSG 46
Score = 42.1 bits (100), Expect = 4e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ ++P+ C CGK+F NL H H+G P
Sbjct: 3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSG 42
Score = 40.6 bits (96), Expect = 2e-05
Identities = 16/34 (47%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY CTVC K F SNL H IH
Sbjct: 2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY CGK+F NL H H+G P
Sbjct: 2 SSGSSGTGERPYI-----CTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43
>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 46
Score = 71.4 bits (176), Expect = 1e-16
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG++P+ C C K F T SSL HRR H+GE+P
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 3e-10
Identities = 14/42 (33%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +G+RP+ C C K F S+L HR +H +KP
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L H R+HTGEKP
Sbjct: 15 CIECGKAFKTKSSLICHRRSHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 5e-06
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +P++C CGK+F T +L H SH+G P
Sbjct: 3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSG 42
Score = 37.5 bits (88), Expect = 2e-04
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F S+L H H
Sbjct: 2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ CGK+F T +L H SH+G P +
Sbjct: 2 SSGSSGTGQRPYECIE-----CGKAFKTKSSLICHRRSHTGEKPSGPS 44
>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 44
Score = 71.4 bits (176), Expect = 1e-16
Identities = 14/42 (33%), Positives = 19/42 (45%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+ C+ C K F S L H R H+G
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 54.5 bits (132), Expect = 2e-10
Identities = 14/43 (32%), Positives = 17/43 (39%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
+ SGE+P+ C C K F S L H TH G
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG 44
Score = 49.8 bits (120), Expect = 7e-09
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F SLL H RTH G
Sbjct: 15 CNECGKAFIWKSLLIVHERTHAGVSGPSS 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGK+F L H +H+G
Sbjct: 3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS 42
Score = 37.5 bits (88), Expect = 2e-04
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PY+C C K F S L H H
Sbjct: 2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTH 35
Score = 33.3 bits (77), Expect = 0.006
Identities = 13/47 (27%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S SG PY+ + CGK+F L H +H+G
Sbjct: 2 SSGSSGSGEKPYECNE-----CGKAFIWKSLLIVHERTHAGVSGPSS 43
>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 71.0 bits (175), Expect = 2e-16
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F+ S L+ H++ H+GER
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 53.7 bits (130), Expect = 3e-10
Identities = 12/42 (28%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K FT S L+ H+ +H ++
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 13/29 (44%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK+F R S L H ++HTGE+
Sbjct: 15 CSDCGKAFTRKSGLHIHQQSHTGERHSGP 43
Score = 44.0 bits (105), Expect = 9e-07
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F L H SH+G
Sbjct: 3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC+ C K F + S L H H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSH 35
Score = 37.1 bits (87), Expect = 3e-04
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK CGK+F L H SH+G +
Sbjct: 2 SSGSSGTGEKPYK-----CSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44
>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible
early growth response protein 1, TGFB-inducible early
growth response protein 1; NMR {Homo sapiens}
Length = 72
Score = 71.6 bits (176), Expect = 2e-16
Identities = 22/68 (32%), Positives = 29/68 (42%), Gaps = 4/68 (5%)
Query: 159 LKRHTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVC--PICFKTFTASSN 214
+ + H+C C K + SS L H R H+GE+P C C + F S
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 215 LYYHRITH 222
L HR TH
Sbjct: 65 LSRHRRTH 72
Score = 70.1 bits (172), Expect = 7e-16
Identities = 28/68 (41%), Positives = 36/68 (52%), Gaps = 4/68 (5%)
Query: 131 SRKAKKKSPSKTMLPCTV--CGKSFDRPSLLKRHTRTHTGEKPHVCDV--CSKGFSTSSS 186
S + S C+ CGK++ + S LK HTRTHTGEKP C C + F+ S
Sbjct: 5 SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64
Query: 187 LNTHRRIH 194
L+ HRR H
Sbjct: 65 LSRHRRTH 72
Score = 60.5 bits (147), Expect = 3e-12
Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 4/71 (5%)
Query: 184 SSSLNTHRRIHSGERPHVCPI--CFKTFTASSNLYYHRITHVKDKPHKCG--ACGKSFPT 239
SS + + S R H+C C KT+ SS+L H TH +KP C C + F
Sbjct: 2 SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 240 PGNLRTHSYSH 250
L H +H
Sbjct: 62 SDELSRHRRTH 72
Score = 49.7 bits (119), Expect = 1e-08
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 5/71 (7%)
Query: 243 LRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTV--CIKGFAK 300
S + P CGK++ +L+ H+ +H+G P+ C+ C + FA+
Sbjct: 5 SSGPQIDSSRIRSHICSHPG---CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 301 SSNLKNHMTIH 311
S L H H
Sbjct: 62 SDELSRHRRTH 72
Score = 47.0 bits (112), Expect = 1e-07
Identities = 18/75 (24%), Positives = 31/75 (41%), Gaps = 5/75 (6%)
Query: 211 ASSNLYYHRITHVKDKPHKC--GACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGK 268
SS +I + + H C CGK++ +L+ H+ +H+G P+ C +
Sbjct: 1 GSSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKG---CER 57
Query: 269 SFPTPGNLRTHSYSH 283
F L H +H
Sbjct: 58 RFARSDELSRHRRTH 72
>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 42
Score = 70.6 bits (174), Expect = 2e-16
Identities = 14/39 (35%), Positives = 22/39 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
+ + GEKP+ C++C F +L +H RIH+G P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 49.8 bits (120), Expect = 6e-09
Identities = 13/28 (46%), Positives = 14/28 (50%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPH 172
PC +CG F LK H R HTG P
Sbjct: 13 PCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 47.9 bits (115), Expect = 3e-08
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S S G PY C +C F LK+H+ IH
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIH 34
Score = 44.4 bits (106), Expect = 7e-07
Identities = 11/39 (28%), Positives = 13/39 (33%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPH 228
GE+P+ C IC F L H H P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 44.0 bits (105), Expect = 1e-06
Identities = 12/39 (30%), Positives = 18/39 (46%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPY 256
+ +KP+ C CG F L++H H+GS P
Sbjct: 2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40
Score = 34.0 bits (79), Expect = 0.003
Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 5/44 (11%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPY 289
S S G PY CG F L++H H+GS P
Sbjct: 2 SSGSSGGEKPYP-----CEICGTRFRHLQTLKSHLRIHTGSGPS 40
>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A
Length = 46
Score = 70.7 bits (174), Expect = 3e-16
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F +S L H+R+HSGE+P
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 52.6 bits (127), Expect = 9e-10
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K+F +S L H+ H +KP
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 46.8 bits (112), Expect = 1e-07
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKSF S L +H R H+GEKP
Sbjct: 15 CKECGKSFRWASCLLKHQRVHSGEKPSGP 43
Score = 42.2 bits (100), Expect = 4e-06
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGKSF L H HSG P
Sbjct: 3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSG 42
Score = 38.7 bits (91), Expect = 7e-05
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C C K F +S L H +H
Sbjct: 2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVH 35
Score = 35.6 bits (83), Expect = 8e-04
Identities = 15/48 (31%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY CGKSF L H HSG P +
Sbjct: 2 SSGSSGTGEKPYNCKE-----CGKSFRWASCLLKHQRVHSGEKPSGPS 44
>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A
Length = 46
Score = 70.6 bits (174), Expect = 3e-16
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG KP+ C C+K FS S L H+R H+G +P
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 53.7 bits (130), Expect = 3e-10
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +G +P+ C C KTF+ S L H+ +H KP +
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS 45
Score = 47.9 bits (115), Expect = 3e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ C K+F S L H R+HTG KP
Sbjct: 15 CSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43
Score = 43.3 bits (103), Expect = 2e-06
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP+ C C K+F L H SH+G P
Sbjct: 3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSG 42
Score = 37.9 bits (89), Expect = 1e-04
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C+ C K F+ S L H H
Sbjct: 2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSH 35
Score = 36.7 bits (86), Expect = 3e-04
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY C K+F L H SH+G P +
Sbjct: 2 SSGSSGTGVKPYGCSQ-----CAKTFSLKSQLIVHQRSHTGVKPSGPS 44
>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 3e-16
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ GEK + CDVC K FS SS L TH+R+H+GE+P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 54.5 bits (132), Expect = 2e-10
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ GE+ + C +C K F+ SS+L H+ H +KP +
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS 45
Score = 48.3 bits (116), Expect = 3e-08
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C VCGK F + S L+ H R HTGEKP
Sbjct: 15 CDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 2e-06
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ + +K +KC CGK F +L+TH H+G P
Sbjct: 3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSG 42
Score = 40.6 bits (96), Expect = 1e-05
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S G YKC VC K F++SS+L+ H +H
Sbjct: 2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVH 35
Score = 36.0 bits (84), Expect = 6e-04
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S G YK CGK F +L+TH H+G P +
Sbjct: 2 SSGSSGMGEKCYKCDV-----CGKEFSQSSHLQTHQRVHTGEKPSGPS 44
>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 3e-16
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP CD+C K F S LN H +H+ E+P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 54.8 bits (133), Expect = 1e-10
Identities = 14/42 (33%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P C IC K+F S L H + H +KP
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43
Score = 51.0 bits (123), Expect = 3e-09
Identities = 15/30 (50%), Positives = 17/30 (56%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C +CGKSF S L RH+ HT EKP
Sbjct: 15 CDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44
Score = 43.6 bits (104), Expect = 1e-06
Identities = 14/40 (35%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP KC CGKSF L HS H+ P
Sbjct: 3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSG 42
Score = 41.7 bits (99), Expect = 7e-06
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+KC +C K F S L H +H
Sbjct: 2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVH 35
Score = 35.9 bits (84), Expect = 6e-04
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+K CGKSF L HS H+ P +
Sbjct: 2 SSGSSGTGEKPFKCDI-----CGKSFCGRSRLNRHSMVHTAEKPSGPS 44
>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.3 bits (173), Expect = 3e-16
Identities = 18/42 (42%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ GEKP+ C C K FS+ S L H R HSGE+P
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 52.9 bits (128), Expect = 7e-10
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P+ C C K F++ S L H TH +KP +
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSS 45
Score = 47.5 bits (114), Expect = 5e-08
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK+F S L H RTH+GEKP
Sbjct: 15 CSECGKAFSSKSYLIIHMRTHSGEKPSGP 43
Score = 42.5 bits (101), Expect = 3e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGK+F + L H +HSG P
Sbjct: 3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSG 42
Score = 38.7 bits (91), Expect = 8e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C+ C K F+ S L HM H
Sbjct: 2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTH 35
Score = 36.8 bits (86), Expect = 3e-04
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY CGK+F + L H +HSG P +
Sbjct: 2 SSGSSGAGEKPYGCSE-----CGKAFSSKSYLIIHMRTHSGEKPSGPS 44
>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 4e-16
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG KP++C+ C K FS SSL TH+ IH+GE+P
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 51.8 bits (125), Expect = 2e-09
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +G +P++C C K F+ S+L H++ H +KP
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 2e-07
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L H HTGEKP
Sbjct: 15 CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 2e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP+ C CGK+F +L TH H+G P
Sbjct: 3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSG 42
Score = 39.4 bits (93), Expect = 4e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C C K F+ S+L H IH
Sbjct: 2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY CGK+F +L TH H+G P
Sbjct: 2 SSGSSGTGVKPYM-----CNECGKAFSVYSSLTTHQVIHTGEKPSGP 43
>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 4e-16
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+ C C K F + LN HRRIH+G RP
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 52.9 bits (128), Expect = 7e-10
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SGE+P+ C C K F ++L HR H +P
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 47.9 bits (115), Expect = 3e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK+F R + L H R HTG +P
Sbjct: 15 CSECGKAFHRHTHLNEHRRIHTGYRPSGP 43
Score = 41.7 bits (99), Expect = 6e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F +L H H+G P
Sbjct: 3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSG 42
Score = 39.4 bits (93), Expect = 4e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PYKC+ C K F + ++L H IH
Sbjct: 2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG PYK CGK+F +L H H+G P +
Sbjct: 2 SSGSSGSGEKPYKCSE-----CGKAFHRHTHLNEHRRIHTGYRPSGPS 44
>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 4e-16
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+VC K F S+ LN H R+H+ E
Sbjct: 2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43
Score = 50.6 bits (122), Expect = 4e-09
Identities = 11/43 (25%), Positives = 20/43 (46%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+GE+P+ C +C K F S++L H H ++ +
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45
Score = 49.0 bits (118), Expect = 2e-08
Identities = 12/30 (40%), Positives = 15/30 (50%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C VCGK+F + L +H R HT E
Sbjct: 15 CNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44
Score = 40.6 bits (96), Expect = 2e-05
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGK+F +L H H+
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSG 42
Score = 40.6 bits (96), Expect = 2e-05
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S +G PY C VC K F S++L H+ +H
Sbjct: 3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35
Score = 32.9 bits (76), Expect = 0.009
Identities = 11/47 (23%), Positives = 17/47 (36%), Gaps = 5/47 (10%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
S +G PY + CGK+F +L H H+ +
Sbjct: 3 SGSSGTGEKPYSCNV-----CGKAFVLSAHLNQHLRVHTQETLSGPS 44
>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.2 bits (173), Expect = 4e-16
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C K F+T S+L H+R H+GE+P
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 53.3 bits (129), Expect = 4e-10
Identities = 15/44 (34%), Positives = 21/44 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P C C K F SNL H+ TH +KP +
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 7e-08
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ C K+F+ S L H RTHTGEKP
Sbjct: 15 CSECQKAFNTKSNLIVHQRTHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 3e-06
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP +C C K+F T NL H +H+G P
Sbjct: 3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSG 42
Score = 37.5 bits (88), Expect = 2e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P++C+ C K F SNL H H
Sbjct: 2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTH 35
Score = 36.3 bits (85), Expect = 5e-04
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P++ C K+F T NL H +H+G P +
Sbjct: 2 SSGSSGTGEKPFECSE-----CQKAFNTKSNLIVHQRTHTGEKPSGPS 44
>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 70.3 bits (173), Expect = 4e-16
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C +C K F+ S L+ H++IH+GE+P
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 3e-10
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C IC K+FT S L+ H+ H +KP
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 8e-08
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C++CGKSF + S L H + HTGEKP
Sbjct: 15 CSICGKSFTKKSQLHVHQQIHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 5e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGKSF L H H+G P
Sbjct: 3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSG 42
Score = 38.3 bits (90), Expect = 9e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C++C K F K S L H IH
Sbjct: 2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ CGKSF L H H+G P +
Sbjct: 2 SSGSSGTGEKPYECSI-----CGKSFTKKSQLHVHQQIHTGEKPSGPS 44
>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2eoi_A
Length = 46
Score = 69.8 bits (172), Expect = 4e-16
Identities = 21/42 (50%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C K FS SS L TH+RIH+GE+P
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 51.7 bits (125), Expect = 2e-09
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P C C K+F+ SS L H+ H +KP +
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 8e-08
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKSF S L H R HTGEKP
Sbjct: 15 CAECGKSFSISSQLATHQRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 6e-06
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP +C CGKSF L TH H+G P
Sbjct: 3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P++C C K F+ SS L H IH
Sbjct: 2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P++ CGKSF L TH H+G P +
Sbjct: 2 SSGSSGTGEKPFE-----CAECGKSFSISSQLATHQRIHTGEKPSGPS 44
>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.9 bits (172), Expect = 4e-16
Identities = 21/41 (51%), Positives = 26/41 (63%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ CDVC K F SSL H+RIH+GE+P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 4e-10
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C +C K+F S+L H+ H +KP
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 5e-08
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C VC KSF S L H R HTGEKP
Sbjct: 15 CDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 1e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC C KSF +L H H+G P
Sbjct: 3 SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSG 42
Score = 41.0 bits (97), Expect = 1e-05
Identities = 15/34 (44%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC VC K F S+L H IH
Sbjct: 2 SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIH 35
Score = 36.0 bits (84), Expect = 6e-04
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK C KSF +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCDV-----CHKSFRYGSSLTVHQRIHTGEKPSGPS 44
>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 115
Score = 72.1 bits (176), Expect = 4e-16
Identities = 21/111 (18%), Positives = 27/111 (24%), Gaps = 7/111 (6%)
Query: 154 DRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRI-----HSGERPHVCPICFKT 208
S K + TG C CS + T L H +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61
Query: 209 FTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTH--SYSHSGSWPYK 257
+L K KC CG SF + +L H H
Sbjct: 62 KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112
Score = 67.1 bits (163), Expect = 3e-14
Identities = 17/102 (16%), Positives = 29/102 (28%), Gaps = 4/102 (3%)
Query: 210 TASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTH--SYSHSGSWPYKIHAPSVGACG 267
++ S+ + +C C ++ T L H H ++ +
Sbjct: 2 SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETD--NNNPKR 59
Query: 268 KSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMT 309
S P +L KC C F +L HM
Sbjct: 60 WSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101
Score = 42.4 bits (99), Expect = 2e-05
Identities = 10/66 (15%), Positives = 17/66 (25%), Gaps = 2/66 (3%)
Query: 136 KKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTH--RRI 193
+ + S R L +K C C F + L+ H +
Sbjct: 45 YRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104
Query: 194 HSGERP 199
H +
Sbjct: 105 HYQKVS 110
Score = 35.5 bits (81), Expect = 0.005
Identities = 6/36 (16%), Positives = 14/36 (38%)
Query: 275 NLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTI 310
+ + + +G+ ++C C + L HM
Sbjct: 6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE 41
Score = 27.0 bits (59), Expect = 4.2
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 135 KKKSPSKTMLPCTVCGKSFDRPSLLKRH--TRTHTGEKP 171
+ K ++ +L C CG SF+ L H H +
Sbjct: 72 EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVS 110
>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.8 bits (172), Expect = 4e-16
Identities = 20/42 (47%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C VC K F SS L H +HSGERP
Sbjct: 2 SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 52.5 bits (127), Expect = 8e-10
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+GE+P+ C +C K F SS+L H H ++P +
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS 45
Score = 49.0 bits (118), Expect = 2e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C VCGK+F S L +H H+GE+P
Sbjct: 15 CQVCGKAFRVSSHLVQHHSVHSGERPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F +L H HSG P
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSG 42
Score = 39.4 bits (93), Expect = 4e-05
Identities = 15/33 (45%), Positives = 19/33 (57%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S +G PYKC VC K F SS+L H ++H
Sbjct: 3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVH 35
Score = 34.0 bits (79), Expect = 0.003
Identities = 15/47 (31%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
S +G PYK CGK+F +L H HSG P +
Sbjct: 3 SGSSGTGEKPYKCQV-----CGKAFRVSSHLVQHHSVHSGERPSGPS 44
>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.8 bits (172), Expect = 5e-16
Identities = 20/42 (47%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C VC K FS SL+ H+RIHSG++P
Sbjct: 2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 51.0 bits (123), Expect = 3e-09
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+GE+P+ C +C K F+ +L H+ H KP
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 46.7 bits (112), Expect = 1e-07
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+VCGK+F L H R H+G+KP
Sbjct: 15 CSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43
Score = 39.8 bits (94), Expect = 2e-05
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGK+F +L H HSG P
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSG 42
Score = 37.5 bits (88), Expect = 2e-04
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S +G PY+C+VC K F+ +L H IH
Sbjct: 3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIH 35
Score = 33.3 bits (77), Expect = 0.006
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 5/47 (10%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
S +G PY+ CGK+F +L H HSG P +
Sbjct: 3 SGSSGTGEKPYECSV-----CGKAFSHRQSLSVHQRIHSGKKPSGPS 44
>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C VCSK F+ + L H++ H+GE+P
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 8e-10
Identities = 14/42 (33%), Positives = 23/42 (54%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C +C K FT ++L H+ TH +KP
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C VC K+F + + L +H +THTGEKP
Sbjct: 15 CKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 9e-06
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C C K+F +L H +H+G P
Sbjct: 3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSG 42
Score = 37.9 bits (89), Expect = 2e-04
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C VC K F + ++L H H
Sbjct: 2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ C K+F +L H +H+G P +
Sbjct: 2 SSGSSGTGEKPYECKV-----CSKAFTQKAHLAQHQKTHTGEKPSGPS 44
>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 18/42 (42%), Positives = 24/42 (57%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F S L H+RIH+GE+P
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 13/44 (29%), Positives = 20/44 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P+ C C K F S L H+ H +KP +
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 7e-08
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L+ H R HTGEKP
Sbjct: 15 CEECGKAFIHDSQLQEHQRIHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 3e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGK+F L+ H H+G P
Sbjct: 3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSG 42
Score = 38.7 bits (91), Expect = 6e-05
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C C K F S L+ H IH
Sbjct: 2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY CGK+F L+ H H+G P +
Sbjct: 2 SSGSSGTGEKPYNCEE-----CGKAFIHDSQLQEHQRIHTGEKPSGPS 44
>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2ena_A 2en4_A
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 19/42 (45%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C KGFS S+LN H ++H+GE+P
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P C C K F+ S L H H +KP
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 4e-08
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F R S L H + HTGEKP
Sbjct: 15 CVECGKGFSRRSALNVHHKLHTGEKPSGP 43
Score = 43.7 bits (104), Expect = 1e-06
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP KC CGK F L H H+G P
Sbjct: 3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSG 42
Score = 39.0 bits (92), Expect = 5e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+KC C KGF++ S L H +H
Sbjct: 2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLH 35
Score = 37.1 bits (87), Expect = 3e-04
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+K CGK F L H H+G P +
Sbjct: 2 SSGSSGTGEKPFK-----CVECGKGFSRRSALNVHHKLHTGEKPSGPS 44
>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F+ ++L H+RIH+GE+P
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 51.0 bits (123), Expect = 3e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F +NL H+ H +KP
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 1e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + + L +H R HTGEKP
Sbjct: 15 CGECGKAFAQKANLTQHQRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 2e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++CG CGK+F NL H H+G P
Sbjct: 3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSG 42
Score = 39.0 bits (92), Expect = 6e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K FA+ +NL H IH
Sbjct: 2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIH 35
Score = 35.6 bits (83), Expect = 9e-04
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ G CGK+F NL H H+G P +
Sbjct: 2 SSGSSGTGEKPYR-----CGECGKAFAQKANLTQHQRIHTGEKPSGPS 44
>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP C+ C KGF T+S +H+R HSGE+P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43
Score = 54.1 bits (131), Expect = 2e-10
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 1/46 (2%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACG 234
+ SGE+P C C K F +S Y H+ +H +KP + G
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP-SSG 46
Score = 48.3 bits (116), Expect = 3e-08
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C CGK F S H R+H+GEKP
Sbjct: 15 CEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44
Score = 44.1 bits (105), Expect = 1e-06
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP KC CGK F T +H SHSG P
Sbjct: 3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG P+KC C KGF +S +H H
Sbjct: 2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSH 35
Score = 38.3 bits (90), Expect = 9e-05
Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG P+K CGK F T +H SHSG P +
Sbjct: 2 SSGSSGSGEKPFKCEE-----CGKGFYTNSQCYSHQRSHSGEKPSGPS 44
>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.4 bits (171), Expect = 6e-16
Identities = 16/42 (38%), Positives = 24/42 (57%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE+ + C C K F+ S+L H+RIH+GE+P
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 53.3 bits (129), Expect = 5e-10
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GER + C C K F S L H+ H +KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 5e-08
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK+F R S L H R HTGEKP
Sbjct: 15 CSECGKAFARKSTLIMHQRIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 10/40 (25%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ ++ ++C CGK+F L H H+G P
Sbjct: 3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSG 42
Score = 37.1 bits (87), Expect = 3e-04
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G Y+C+ C K FA+ S L H IH
Sbjct: 2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIH 35
Score = 32.9 bits (76), Expect = 0.010
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G Y+ CGK+F L H H+G P +
Sbjct: 2 SSGSSGTGERHYECSE-----CGKAFARKSTLIMHQRIHTGEKPSGPS 44
>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 16/41 (39%), Positives = 28/41 (68%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C KG+++ +L+ H+++H+GERP
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 54.1 bits (131), Expect = 2e-10
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K + + NL H+ H ++P
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 46.8 bits (112), Expect = 1e-07
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK ++ L H + HTGE+P
Sbjct: 15 CEKCGKGYNSKFNLDMHQKVHTGERPSGP 43
Score = 44.4 bits (106), Expect = 6e-07
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK + + NL H H+G P
Sbjct: 3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSG 42
Score = 40.6 bits (96), Expect = 2e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C KG+ NL H +H
Sbjct: 2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVH 35
Score = 37.5 bits (88), Expect = 2e-04
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK CGK + + NL H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCEK-----CGKGYNSKFNLDMHQKVHTGERPSGPS 44
>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 6e-16
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP C+ C K F+ +S L++H+R+H+GE+P
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 6e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SGE+P C C K FT +S L+ H+ H +KP
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 6e-08
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L H R HTGEKP
Sbjct: 15 CEECGKRFTQNSQLHSHQRVHTGEKPSGP 43
Score = 42.5 bits (101), Expect = 3e-06
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP KC CGK F L +H H+G P
Sbjct: 3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSG 42
Score = 40.6 bits (96), Expect = 2e-05
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG P+KC C K F ++S L +H +H
Sbjct: 2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVH 35
Score = 37.1 bits (87), Expect = 3e-04
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG P+K CGK F L +H H+G P +
Sbjct: 2 SSGSSGSGEKPFKCEE-----CGKRFTQNSQLHSHQRVHTGEKPSGPS 44
>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 7e-16
Identities = 18/42 (42%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F SSL H+ HSGE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 52.5 bits (127), Expect = 1e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F A S+L H+ TH +KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43
Score = 47.5 bits (114), Expect = 6e-08
Identities = 16/35 (45%), Positives = 18/35 (51%), Gaps = 3/35 (8%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKG 180
C CGK+F S L H TH+GEKP S G
Sbjct: 15 CNECGKAFRARSSLAIHQATHSGEKPS---GPSSG 46
Score = 42.1 bits (100), Expect = 5e-06
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F +L H +HSG P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSG 42
Score = 37.9 bits (89), Expect = 1e-04
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F S+L H H
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 15/48 (31%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK+F +L H +HSG P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKAFRARSSLAIHQATHSGEKPSGPS 44
>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 7e-16
Identities = 20/42 (47%), Positives = 24/42 (57%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKPH C C K FS +S L H+RIH+GE P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 51.0 bits (123), Expect = 3e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+PH C C K+F+ +S L H+ H + P
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 46.0 bits (110), Expect = 2e-07
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKSF S L H R HTGE P
Sbjct: 15 CRECGKSFSFNSQLIVHQRIHTGENPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KPH+C CGKSF L H H+G P
Sbjct: 3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSG 42
Score = 37.5 bits (88), Expect = 2e-04
Identities = 12/34 (35%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P++C C K F+ +S L H IH
Sbjct: 2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIH 35
Score = 34.0 bits (79), Expect = 0.003
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P++ CGKSF L H H+G P +
Sbjct: 2 SSGSSGTGEKPHECRE-----CGKSFSFNSQLIVHQRIHTGENPSGPS 44
>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.5 bits (171), Expect = 7e-16
Identities = 15/41 (36%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP++C C K F+ S+L H++IH+ ++P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 55.2 bits (134), Expect = 9e-11
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P++C C K FT SNL H+ H K KP
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 47.9 bits (115), Expect = 4e-08
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L +H + HT +KP
Sbjct: 15 CAECGKAFTIRSNLIKHQKIHTKQKPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGK+F NL H H+ P
Sbjct: 3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 14/34 (41%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C C K F SNL H IH
Sbjct: 2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY CGK+F NL H H+ P +
Sbjct: 2 SSGSSGTGEKPYI-----CAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44
>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.4 bits (171), Expect = 7e-16
Identities = 16/41 (39%), Positives = 24/41 (58%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE P +C C K F+ ++L H++IH+GERP
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 54.8 bits (133), Expect = 1e-10
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE P +C C K FT +NL H+ H ++P
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 46.3 bits (111), Expect = 1e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK F + L H + HTGE+P
Sbjct: 15 CSECGKVFTHKTNLIIHQKIHTGERPSGP 43
Score = 42.9 bits (102), Expect = 2e-06
Identities = 12/40 (30%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ + P C CGK F NL H H+G P
Sbjct: 3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+ C+ C K F +NL H IH
Sbjct: 2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIH 35
Score = 36.7 bits (86), Expect = 4e-04
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+ CGK F NL H H+G P +
Sbjct: 2 SSGSSGTGENPFICSE-----CGKVFTHKTNLIIHQKIHTGERPSGPS 44
>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 69.0 bits (170), Expect = 8e-16
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F+T S+L H+R H+GE
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 55.9 bits (136), Expect = 5e-11
Identities = 14/43 (32%), Positives = 20/43 (46%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
+ +GE+P+ C C K F SNL H+ TH + G
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG 44
Score = 47.9 bits (115), Expect = 3e-08
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C C K+F+ S L H RTHTGE
Sbjct: 15 CNECQKAFNTKSNLMVHQRTHTGESGPSS 43
Score = 42.1 bits (100), Expect = 4e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C C K+F T NL H +H+G
Sbjct: 3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPS 42
Score = 38.2 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F SNL H H
Sbjct: 2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTH 35
Score = 35.5 bits (83), Expect = 0.001
Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY+ + C K+F T NL H +H+G
Sbjct: 2 SSGSSGTGEKPYECNE-----CQKAFNTKSNLMVHQRTHTGESGPSS 43
>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 9e-16
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K FS +S L H+RIH+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 3e-09
Identities = 13/42 (30%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F+ +S L H+ H +KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 9e-08
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + S L RH R HTGEKP
Sbjct: 15 CNECGKAFSQTSKLARHQRIHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 9e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F L H H+G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG 42
Score = 38.3 bits (90), Expect = 9e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F+++S L H IH
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK+F L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKAFSQTSKLARHQRIHTGEKPSGPS 44
>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 9e-16
Identities = 21/41 (51%), Positives = 27/41 (65%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ CDVC K FS +SL H+R+HSGE+P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 51.0 bits (123), Expect = 3e-09
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C +C K F+ ++L H+ H +KP
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 47.9 bits (115), Expect = 4e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C VC K+F + L +H R H+GEKP
Sbjct: 15 CDVCRKAFSHHASLTQHQRVHSGEKPSGP 43
Score = 40.6 bits (96), Expect = 2e-05
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C C K+F +L H HSG P
Sbjct: 3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSG 42
Score = 38.6 bits (91), Expect = 8e-05
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C VC K F+ ++L H +H
Sbjct: 2 SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVH 35
Score = 33.2 bits (77), Expect = 0.005
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ C K+F +L H HSG P +
Sbjct: 2 SSGSSGTGEKPYECDV-----CRKAFSHHASLTQHQRVHSGEKPSGPS 44
>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 9e-16
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE+PH C+ C K F S+ L H+RIH+GE+P
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 52.9 bits (128), Expect = 6e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GERPH C C K+F S++L H+ H +KP
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 8e-08
Identities = 15/29 (51%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKSF + + L +H R HTGEKP
Sbjct: 15 CNECGKSFIQSAHLIQHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 7e-06
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ ++PHKC CGKSF +L H H+G P
Sbjct: 3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+KC C K F +S++L H IH
Sbjct: 2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+K + CGKSF +L H H+G P +
Sbjct: 2 SSGSSGTGERPHKCNE-----CGKSFIQSAHLIQHQRIHTGEKPSGPS 44
>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A
Length = 46
Score = 69.1 bits (170), Expect = 9e-16
Identities = 17/42 (40%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEK + C+ C K FS +S L+ H++IH+GE+P
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 4e-09
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+ + C C K F+ +S L H+ H +KP
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 1e-07
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F R S L +H + HTGEKP
Sbjct: 15 CNECGKVFSRNSQLSQHQKIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +K +KC CGK F L H H+G P
Sbjct: 3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSG 42
Score = 39.0 bits (92), Expect = 6e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G YKC C K F+++S L H IH
Sbjct: 2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIH 35
Score = 34.0 bits (79), Expect = 0.003
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G YK + CGK F L H H+G P +
Sbjct: 2 SSGSSGTGEKRYKCNE-----CGKVFSRNSQLSQHQKIHTGEKPSGPS 44
>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 69.1 bits (170), Expect = 1e-15
Identities = 17/41 (41%), Positives = 23/41 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C KGF L TH +H+GE+P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 3e-10
Identities = 13/44 (29%), Positives = 21/44 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P+ C C K F +LY H + H +KP +
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSS 45
Score = 47.5 bits (114), Expect = 5e-08
Identities = 13/29 (44%), Positives = 13/29 (44%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F L H HTGEKP
Sbjct: 15 CEECGKGFICRRDLYTHHMVHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 2e-06
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L TH H+G P
Sbjct: 3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSG 42
Score = 41.4 bits (98), Expect = 9e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C KGF +L H +H
Sbjct: 2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVH 35
Score = 37.5 bits (88), Expect = 2e-04
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK CGK F +L TH H+G P +
Sbjct: 2 SSGSSGTGEKPYKCEE-----CGKGFICRRDLYTHHMVHTGEKPSGPS 44
>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 69.1 bits (170), Expect = 1e-15
Identities = 20/41 (48%), Positives = 23/41 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C K FS LN HRRIH+GE+P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 50.6 bits (122), Expect = 4e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P C C K F+ L HR H +KP
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 7e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F L +H R HTGEKP
Sbjct: 15 CIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP C CGK+F L H H+G P
Sbjct: 3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSG 42
Score = 38.3 bits (90), Expect = 9e-05
Identities = 11/34 (32%), Positives = 15/34 (44%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+ C C K F+ L H IH
Sbjct: 2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 12/48 (25%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+ CGK+F L H H+G P +
Sbjct: 2 SSGSSGTGEKPFDCID-----CGKAFSDHIGLNQHRRIHTGEKPSGPS 44
>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 14/41 (34%), Positives = 23/41 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+ C C KG+ L+ H+R+H+GE+
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 52.1 bits (126), Expect = 1e-09
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SGE+P+ C C K + +L +H+ H +K
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43
Score = 49.5 bits (119), Expect = 1e-08
Identities = 13/30 (43%), Positives = 14/30 (46%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C CGK + R L H R HTGEK
Sbjct: 15 CVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44
Score = 43.7 bits (104), Expect = 1e-06
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK + +L H H+G
Sbjct: 3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSG 42
Score = 40.2 bits (95), Expect = 2e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PYKC C KG+ + +L H +H
Sbjct: 2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVH 35
Score = 37.1 bits (87), Expect = 3e-04
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG PYK CGK + +L H H+G +
Sbjct: 2 SSGSSGSGEKPYKCVE-----CGKGYKRRLDLDFHQRVHTGEKLSGPS 44
>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F +S L+ H+RIH+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F +S L H+ H +KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 7e-08
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F S L RH R HTGEKP
Sbjct: 15 CNECGKVFRHNSYLSRHQRIHTGEKPSGP 43
Score = 43.3 bits (103), Expect = 2e-06
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F L H H+G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F +S L H IH
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 14/48 (29%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK F L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKVFRHNSYLSRHQRIHTGEKPSGPS 44
>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+ C+ C K F+ +S L H RIH+GE+P
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 9e-10
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SGE+P+ C C K FT +S+L H H +KP
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 1e-07
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L H R HTGEKP
Sbjct: 15 CNECGKVFTQNSHLTNHWRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 9e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L H H+G P
Sbjct: 3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 16/34 (47%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PYKC C K F ++S+L NH IH
Sbjct: 2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIH 35
Score = 35.5 bits (83), Expect = 8e-04
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG PYK + CGK F +L H H+G P +
Sbjct: 2 SSGSSGSGEKPYKCNE-----CGKVFTQNSHLTNHWRIHTGEKPSGPS 44
>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ GE+ H C C K F +S+ HRRIH+GE+P
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 8e-10
Identities = 15/42 (35%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ GER H C C K F +SN HR H +KP
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 3e-07
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK F + S +H R HTGEKP
Sbjct: 15 CSDCGKFFLQASNFIQHRRIHTGEKPSGP 43
Score = 44.8 bits (107), Expect = 5e-07
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVG 264
+ ++ H+C CGK F N H H+G P PS G
Sbjct: 3 SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPS---GPSSG 46
Score = 41.8 bits (99), Expect = 6e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S G ++C+ C K F ++SN H IH
Sbjct: 2 SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIH 35
Score = 33.3 bits (77), Expect = 0.005
Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S G ++ CGK F N H H+G P +
Sbjct: 2 SSGSSGHGERGHR-----CSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44
>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 20/41 (48%), Positives = 26/41 (63%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP++C+ C K F S LN HRRIH+GE+P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 4e-10
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P++C C K+F S+L HR H +KP
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 49.4 bits (119), Expect = 1e-08
Identities = 17/29 (58%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKSF + S L RH R HTGEKP
Sbjct: 15 CNECGKSFIQKSHLNRHRRIHTGEKPSGP 43
Score = 41.7 bits (99), Expect = 7e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGKSF +L H H+G P
Sbjct: 3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSG 42
Score = 39.4 bits (93), Expect = 3e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY C C K F + S+L H IH
Sbjct: 2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY + CGKSF +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYICNE-----CGKSFIQKSHLNRHRRIHTGEKPSGPS 44
>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 18/41 (43%), Positives = 23/41 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F S L+ H+RIH+GE P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 53.3 bits (129), Expect = 5e-10
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K+F S L+ H+ H + P
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 47.2 bits (113), Expect = 7e-08
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGKSF + S L H R HTGE P
Sbjct: 15 CSDCGKSFIKKSQLHVHQRIHTGENPSGP 43
Score = 42.1 bits (100), Expect = 5e-06
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGKSF L H H+G P
Sbjct: 3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSG 42
Score = 37.9 bits (89), Expect = 1e-04
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C+ C K F K S L H IH
Sbjct: 2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 14/47 (29%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY+ CGKSF L H H+G P
Sbjct: 2 SSGSSGTGEKPYECSD-----CGKSFIKKSQLHVHQRIHTGENPSGP 43
>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 13/41 (31%), Positives = 24/41 (58%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ + EKP+ C+ C KG++ +L+ H+R+H GE+
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 54.8 bits (133), Expect = 1e-10
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ S E+P+ C C K + NL H+ H+ +K
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43
Score = 47.1 bits (113), Expect = 7e-08
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 3/35 (8%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKG 180
C CGK ++R L H R H GEK S G
Sbjct: 15 CEDCGKGYNRRLNLDMHQRVHMGEKTS---GPSSG 46
Score = 43.6 bits (104), Expect = 1e-06
Identities = 12/40 (30%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK + NL H H G
Sbjct: 3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSG 42
Score = 41.7 bits (99), Expect = 6e-06
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S S PYKC C KG+ + NL H +H
Sbjct: 2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVH 35
Score = 37.1 bits (87), Expect = 2e-04
Identities = 13/48 (27%), Positives = 16/48 (33%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S S PYK CGK + NL H H G +
Sbjct: 2 SSGSSGSVEKPYKCED-----CGKGYNRRLNLDMHQRVHMGEKTSGPS 44
>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 18/42 (42%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F+ +S L HR IH+GE+P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 52.1 bits (126), Expect = 1e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K FT +S+L HR H +KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 6e-08
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L RH HTGEKP
Sbjct: 15 CNECGKVFTQNSHLVRHRGIHTGEKPSGP 43
Score = 40.5 bits (96), Expect = 2e-05
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L H H+G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSG 42
Score = 37.8 bits (89), Expect = 1e-04
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F ++S+L H IH
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIH 35
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK F +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKVFTQNSHLVRHRGIHTGEKPSGPS 44
>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 18/42 (42%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F+ S+L TH++IH+GE+P
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 54.1 bits (131), Expect = 2e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K FT SNL+ H+ H +KP
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 46.3 bits (111), Expect = 2e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L H + HTGEKP
Sbjct: 15 CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 4e-07
Identities = 14/40 (35%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGK+F NL TH H+G P
Sbjct: 3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSG 42
Score = 40.6 bits (96), Expect = 2e-05
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F SNL H IH
Sbjct: 2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIH 35
Score = 36.7 bits (86), Expect = 3e-04
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY+ CGK+F NL TH H+G P
Sbjct: 2 SSGSSGTGEKPYR-----CAECGKAFTDRSNLFTHQKIHTGEKPSGP 43
>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.7 bits (169), Expect = 1e-15
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE P+ C C K FS L +H+R H+GE+P
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 52.1 bits (126), Expect = 1e-09
Identities = 13/42 (30%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE P+ C C K F+ L H+ TH +KP
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F R L H RTH GEKP
Sbjct: 15 CHECGKAFSRKYQLISHQRTHAGEKPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 11/40 (27%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ + P++C CGK+F L +H +H+G P
Sbjct: 3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSG 42
Score = 36.7 bits (86), Expect = 4e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F++ L +H H
Sbjct: 2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ H CGK+F L +H +H+G P +
Sbjct: 2 SSGSSGTGENPYECHE-----CGKAFSRKYQLISHQRTHAGEKPSGPS 44
>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.3 bits (168), Expect = 1e-15
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F+ S L H++ H+GER
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 54.9 bits (133), Expect = 1e-10
Identities = 12/42 (28%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K+FT S L H+ H ++
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 13/29 (44%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGKSF S L+ H + HTGE+
Sbjct: 15 CSDCGKSFTWKSRLRIHQKCHTGERHSGP 43
Score = 45.2 bits (108), Expect = 4e-07
Identities = 14/40 (35%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGKSF LR H H+G
Sbjct: 3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC+ C K F S L+ H H
Sbjct: 2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCH 35
Score = 39.1 bits (92), Expect = 5e-05
Identities = 15/48 (31%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK CGKSF LR H H+G +
Sbjct: 2 SSGSSGTGEKPYKCSD-----CGKSFTWKSRLRIHQKCHTGERHSGPS 44
>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.3 bits (168), Expect = 1e-15
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+ C+ C K FS S L+ H+R H+GE+P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 8e-10
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SGE+P+ C C KTF+ S L H+ TH +KP
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 16/29 (55%), Positives = 19/29 (65%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + S+L H RTHTGEKP
Sbjct: 15 CNECGKTFSQKSILSAHQRTHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 5e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+ C CGK+F L H +H+G P
Sbjct: 3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PY C C K F++ S L H H
Sbjct: 2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTH 35
Score = 35.6 bits (83), Expect = 9e-04
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG PY + CGK+F L H +H+G P +
Sbjct: 2 SSGSSGSGEKPYGCNE-----CGKTFSQKSILSAHQRTHTGEKPSGPS 44
>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.3 bits (168), Expect = 1e-15
Identities = 17/42 (40%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F +S L H+ IH+GE+P
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 51.7 bits (125), Expect = 1e-09
Identities = 13/42 (30%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F +S+L H++ H +KP
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 47.9 bits (115), Expect = 4e-08
Identities = 16/29 (55%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F R S L RH HTGEKP
Sbjct: 15 CHECGKVFRRNSHLARHQLIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L H H+G P
Sbjct: 3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSG 42
Score = 39.0 bits (92), Expect = 6e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F ++S+L H IH
Sbjct: 2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIH 35
Score = 33.6 bits (78), Expect = 0.004
Identities = 15/48 (31%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK H CGK F +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCHE-----CGKVFRRNSHLARHQLIHTGEKPSGPS 44
>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.3 bits (168), Expect = 2e-15
Identities = 19/42 (45%), Positives = 26/42 (61%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K FS SSL TH+ IH+G++P
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 50.6 bits (122), Expect = 4e-09
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F+ S+L H+ H KP
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 46.0 bits (110), Expect = 2e-07
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S L H HTG+KP
Sbjct: 15 CNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43
Score = 40.6 bits (96), Expect = 1e-05
Identities = 13/40 (32%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGK+F +L TH H+G P
Sbjct: 3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSG 42
Score = 37.9 bits (89), Expect = 1e-04
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F+ S+L H IH
Sbjct: 2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIH 35
Score = 34.0 bits (79), Expect = 0.003
Identities = 14/48 (29%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ + CGK+F +L TH H+G P +
Sbjct: 2 SSGSSGTGEKPYECNQ-----CGKAFSVRSSLTTHQAIHTGKKPSGPS 44
>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.3 bits (168), Expect = 2e-15
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +G+KP+ C C K F LN H+R+H+GER
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 49.1 bits (118), Expect = 2e-08
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ SG++P+ C C KTF +L H+ H ++
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C C K+F + L +H R HTGE+
Sbjct: 15 CKECRKTFIQIGHLNQHKRVHTGERSSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP++C C K+F G+L H H+G
Sbjct: 3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSG 42
Score = 38.7 bits (91), Expect = 7e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG PY+C C K F + +L H +H
Sbjct: 2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVH 35
Score = 33.7 bits (78), Expect = 0.005
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S SG PY+ C K+F G+L H H+G
Sbjct: 2 SSGSSGSGKKPYECKE-----CRKTFIQIGHLNQHKRVHTGERSSGP 43
>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 68.4 bits (168), Expect = 2e-15
Identities = 16/41 (39%), Positives = 17/41 (41%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C FS S SL H R H P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43
Score = 52.6 bits (127), Expect = 1e-09
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P C C F+ S +L+ H +H + P +
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45
Score = 48.7 bits (117), Expect = 2e-08
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C CG +F L +H R+H P
Sbjct: 15 CKECGMNFSWSCSLFKHLRSHERTDPSGPS 44
Score = 43.7 bits (104), Expect = 1e-06
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP +C CG +F +L H SH + P
Sbjct: 3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSG 42
Score = 41.0 bits (97), Expect = 9e-06
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P++C C F+ S +L H+ H
Sbjct: 2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSH 35
Score = 35.6 bits (83), Expect = 9e-04
Identities = 11/47 (23%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G P++ CG +F +L H SH + P
Sbjct: 2 SSGSSGTGEKPFQCKE-----CGMNFSWSCSLFKHLRSHERTDPSGP 43
>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 68.3 bits (168), Expect = 2e-15
Identities = 16/42 (38%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ + K H C C +GF+ S LN H+RIH+GE+P
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 47.2 bits (113), Expect = 7e-08
Identities = 12/42 (28%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ S + H C C + FT S+L H+ H +KP
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 45.2 bits (108), Expect = 3e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CG+ F S L +H R HTGEKP
Sbjct: 15 CHECGRGFTLKSHLNQHQRIHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 9e-06
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S S + ++C C +GF S+L H IH
Sbjct: 2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIH 35
Score = 39.1 bits (92), Expect = 5e-05
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVG 264
+ K H+C CG+ F +L H H+G P PS G
Sbjct: 3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPS---GPSSG 46
Score = 30.2 bits (69), Expect = 0.070
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S S + ++ H CG+ F +L H H+G P +
Sbjct: 2 SSGSSGSSTKSHQCHE-----CGRGFTLKSHLNQHQRIHTGEKPSGPS 44
>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 68.0 bits (167), Expect = 2e-15
Identities = 16/42 (38%), Positives = 27/42 (64%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP C+ C K F+ +S L++H+R+H+GE+P
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 51.8 bits (125), Expect = 2e-09
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ SGE+P C C K FT +S+L+ H+ H +KP +
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45
Score = 46.8 bits (112), Expect = 1e-07
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L H R HTGEKP
Sbjct: 15 CEECGKRFTQNSHLHSHQRVHTGEKPSGP 43
Score = 41.0 bits (97), Expect = 9e-06
Identities = 12/43 (27%), Positives = 19/43 (44%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHA 260
+ +KP +C CGK F +L +H H+G P +
Sbjct: 3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS 45
Score = 38.7 bits (91), Expect = 6e-05
Identities = 12/34 (35%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG P++C C K F ++S+L +H +H
Sbjct: 2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG P++ CGK F +L +H H+G P +
Sbjct: 2 SSGSSGSGEKPFQCEE-----CGKRFTQNSHLHSHQRVHTGEKPSGPS 44
>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.9 bits (167), Expect = 2e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F+ +S L H+RIH+G +P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 51.4 bits (124), Expect = 3e-09
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P+ C C K FT +S+L H+ H KP +
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSS 45
Score = 47.1 bits (113), Expect = 8e-08
Identities = 14/29 (48%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L H R HTG KP
Sbjct: 15 CNECGKVFTQNSHLANHQRIHTGVKPSGP 43
Score = 41.0 bits (97), Expect = 1e-05
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L H H+G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSG 42
Score = 39.0 bits (92), Expect = 6e-05
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F ++S+L NH IH
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK F +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKVFTQNSHLANHQRIHTGVKPSGPS 44
>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
PDB: 2ysv_A
Length = 46
Score = 67.9 bits (167), Expect = 2e-15
Identities = 17/42 (40%), Positives = 25/42 (59%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K FS ++ L H+R+H+GE+P
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 50.2 bits (121), Expect = 6e-09
Identities = 12/42 (28%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F+ +++L H+ H +KP
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 1e-07
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + + L +H R HTGEKP
Sbjct: 15 CKECGKAFSQTTHLIQHQRVHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGK+F +L H H+G P
Sbjct: 3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSG 42
Score = 37.1 bits (87), Expect = 3e-04
Identities = 11/34 (32%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F+++++L H +H
Sbjct: 2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVH 35
Score = 33.2 bits (77), Expect = 0.006
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ CGK+F +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYECKE-----CGKAFSQTTHLIQHQRVHTGEKPSGPS 44
>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.9 bits (167), Expect = 2e-15
Identities = 16/42 (38%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP C C K F + L +H RIH+GE+P
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 51.7 bits (125), Expect = 1e-09
Identities = 13/44 (29%), Positives = 19/44 (43%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ SGE+P C C K F + +L H H +KP +
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 8e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + L H R HTGEKP
Sbjct: 15 CKECGKAFRQNIHLASHLRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 8e-06
Identities = 13/43 (30%), Positives = 20/43 (46%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHA 260
+ +KP KC CGK+F +L +H H+G P +
Sbjct: 3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSS 45
Score = 38.6 bits (91), Expect = 7e-05
Identities = 13/34 (38%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG P+KC C K F ++ +L +H+ IH
Sbjct: 2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG P+K CGK+F +L +H H+G P +
Sbjct: 2 SSGSSGSGEKPFKCKE-----CGKAFRQNIHLASHLRIHTGEKPSGPS 44
>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.9 bits (167), Expect = 3e-15
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ G+K C+ C K F+ SSSL H+RIH+GE+P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 53.7 bits (130), Expect = 4e-10
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +G++ C C KTFT SS+L H+ H +KP +
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS 45
Score = 46.4 bits (111), Expect = 2e-07
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C C K+F + S L H R HTGEKP
Sbjct: 15 CNECKKTFTQSSSLTVHQRIHTGEKPSGP 43
Score = 41.3 bits (98), Expect = 7e-06
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ K KC C K+F +L H H+G P
Sbjct: 3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSG 42
Score = 40.2 bits (95), Expect = 2e-05
Identities = 13/34 (38%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G +KC C K F +SS+L H IH
Sbjct: 2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIH 35
Score = 35.6 bits (83), Expect = 9e-04
Identities = 11/48 (22%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G +K + C K+F +L H H+G P +
Sbjct: 2 SSGSSGAGKKLFKCNE-----CKKTFTQSSSLTVHQRIHTGEKPSGPS 44
>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 68.0 bits (167), Expect = 3e-15
Identities = 14/42 (33%), Positives = 18/42 (42%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C K F S L H+R H ++
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 49.9 bits (120), Expect = 8e-09
Identities = 15/44 (34%), Positives = 20/44 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+P C C K F S L H+ THV DK +
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS 45
Score = 48.7 bits (117), Expect = 2e-08
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
CT CGK+F S L H RTH +K
Sbjct: 15 CTECGKAFCWKSQLIMHQRTHVDDKHSGP 43
Score = 43.7 bits (104), Expect = 1e-06
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP KC CGK+F L H +H
Sbjct: 3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 15/34 (44%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P KCT C K F S L H H
Sbjct: 2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTH 35
Score = 35.6 bits (83), Expect = 0.001
Identities = 11/48 (22%), Positives = 16/48 (33%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P K CGK+F L H +H +
Sbjct: 2 SSGSSGTGEKPCKCTE-----CGKAFCWKSQLIMHQRTHVDDKHSGPS 44
>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 67.5 bits (166), Expect = 3e-15
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C K ++ L H+R+H+GE+P
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 52.1 bits (126), Expect = 1e-09
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P C C K++ +L H+ H +KP
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 7e-08
Identities = 14/29 (48%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKS+++ L +H R HTGEKP
Sbjct: 15 CGECGKSYNQRVHLTQHQRVHTGEKPSGP 43
Score = 42.1 bits (100), Expect = 5e-06
Identities = 14/40 (35%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP KCG CGKS+ +L H H+G P
Sbjct: 3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSG 42
Score = 38.3 bits (90), Expect = 9e-05
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+KC C K + + +L H +H
Sbjct: 2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVH 35
Score = 35.2 bits (82), Expect = 0.001
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+K CGKS+ +L H H+G P +
Sbjct: 2 SSGSSGTGEKPFKCGE-----CGKSYNQRVHLTQHQRVHTGEKPSGPS 44
>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.5 bits (166), Expect = 3e-15
Identities = 16/41 (39%), Positives = 23/41 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE+ + C C K F S+L+ H+RIH GE+P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 51.8 bits (125), Expect = 2e-09
Identities = 13/42 (30%), Positives = 18/42 (42%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GER + C C K F S L H+ H +KP
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 47.1 bits (113), Expect = 7e-08
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK+F + S L H R H GEKP
Sbjct: 15 CSECGKAFIQKSTLSMHQRIHRGEKPSGP 43
Score = 41.7 bits (99), Expect = 5e-06
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ ++ ++C CGK+F L H H G P
Sbjct: 3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G Y+C+ C K F + S L H IH
Sbjct: 2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 12/48 (25%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G Y+ CGK+F L H H G P +
Sbjct: 2 SSGSSGTGERHYECSE-----CGKAFIQKSTLSMHQRIHRGEKPSGPS 44
>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 67.6 bits (166), Expect = 3e-15
Identities = 17/41 (41%), Positives = 22/41 (53%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEK + C C K FS + L H R+HSGE+P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 52.1 bits (126), Expect = 1e-09
Identities = 11/44 (25%), Positives = 20/44 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +GE+ + C C K+F+ + L H H +KP +
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSS 45
Score = 47.1 bits (113), Expect = 6e-08
Identities = 15/29 (51%), Positives = 17/29 (58%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGKSF R L +H R H+GEKP
Sbjct: 15 CKECGKSFSRAPCLLKHERLHSGEKPSGP 43
Score = 41.4 bits (98), Expect = 9e-06
Identities = 13/40 (32%), Positives = 16/40 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +K + C CGKSF L H HSG P
Sbjct: 3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 10/34 (29%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G Y C C K F+++ L H +H
Sbjct: 2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLH 35
Score = 35.6 bits (83), Expect = 9e-04
Identities = 14/48 (29%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G Y CGKSF L H HSG P +
Sbjct: 2 SSGSSGTGEKLYNCKE-----CGKSFSRAPCLLKHERLHSGEKPSGPS 44
>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.6 bits (166), Expect = 3e-15
Identities = 17/41 (41%), Positives = 24/41 (58%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C C K F +SS H+R+H+G+RP
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F +S+ H+ H +P
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 46.4 bits (111), Expect = 1e-07
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F S +H R HTG++P
Sbjct: 15 CMECGKAFGDNSSCTQHQRLHTGQRPSGP 43
Score = 42.2 bits (100), Expect = 4e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F + H H+G P
Sbjct: 3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSG 42
Score = 39.5 bits (93), Expect = 3e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F +S+ H +H
Sbjct: 2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLH 35
Score = 35.6 bits (83), Expect = 8e-04
Identities = 13/48 (27%), Positives = 19/48 (39%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK CGK+F + H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCME-----CGKAFGDNSSCTQHQRLHTGQRPSGPS 44
>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 67.6 bits (166), Expect = 3e-15
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GE+P C+ C KGF S L H R+HS E+
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 48.3 bits (116), Expect = 3e-08
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ SGERP C C K F S+L H H ++K +
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS 45
Score = 47.9 bits (115), Expect = 4e-08
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F R S L H R H+ EK
Sbjct: 15 CNECGKGFGRRSHLAGHLRLHSREKSSGP 43
Score = 41.4 bits (98), Expect = 9e-06
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ ++P KC CGK F +L H HS
Sbjct: 3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSG 42
Score = 40.2 bits (95), Expect = 2e-05
Identities = 14/34 (41%), Positives = 20/34 (58%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S SG P+KC C KGF + S+L H+ +H
Sbjct: 2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLH 35
Score = 34.0 bits (79), Expect = 0.003
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S SG P+K + CGK F +L H HS +
Sbjct: 2 SSGSSGSGERPFKCNE-----CGKGFGRRSHLAGHLRLHSREKSSGPS 44
>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 67.5 bits (166), Expect = 3e-15
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
+ + GEKP+ C+ C F + L H IH+G P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 47.1 bits (113), Expect = 8e-08
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C CG F + + L+ H HTG P
Sbjct: 14 CETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 46.0 bits (110), Expect = 2e-07
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S S G PYKC C F + ++L+ H+ IH
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34
Score = 44.8 bits (107), Expect = 4e-07
Identities = 10/39 (25%), Positives = 15/39 (38%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPH 228
GE+P+ C C F ++L H + H P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 44.4 bits (106), Expect = 6e-07
Identities = 14/39 (35%), Positives = 19/39 (48%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPY 256
+ +KP+KC CG F +LR H H+GS P
Sbjct: 2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40
Score = 34.8 bits (81), Expect = 0.002
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 5/44 (11%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPY 289
S S G PYK CG F +LR H H+GS P
Sbjct: 2 SSGSSGGEKPYKCET-----CGARFVQVAHLRAHVLIHTGSGPS 40
>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.5 bits (166), Expect = 4e-15
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F S+L TH+ IH+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 8e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K F A SNL H++ H +KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43
Score = 46.4 bits (111), Expect = 1e-07
Identities = 16/35 (45%), Positives = 17/35 (48%), Gaps = 3/35 (8%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKG 180
C CGK+F S L H HTGEKP S G
Sbjct: 15 CNECGKAFRAHSNLTTHQVIHTGEKPS---GPSSG 46
Score = 44.4 bits (106), Expect = 6e-07
Identities = 15/40 (37%), Positives = 20/40 (50%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK+F NL TH H+G P
Sbjct: 3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSG 42
Score = 40.6 bits (96), Expect = 2e-05
Identities = 15/34 (44%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F SNL H IH
Sbjct: 2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIH 35
Score = 36.7 bits (86), Expect = 3e-04
Identities = 16/48 (33%), Positives = 22/48 (45%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK+F NL TH H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKAFRAHSNLTTHQVIHTGEKPSGPS 44
>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 67.2 bits (165), Expect = 5e-15
Identities = 15/41 (36%), Positives = 19/41 (46%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ GEKP+ C C K FS S L H H+ E+P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 50.2 bits (121), Expect = 5e-09
Identities = 15/44 (34%), Positives = 23/44 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ GE+P+ C C K+F+ S L H ITH ++KP +
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSS 45
Score = 47.5 bits (114), Expect = 5e-08
Identities = 14/29 (48%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGKSF L +H THT EKP
Sbjct: 15 CSECGKSFSGSYRLTQHWITHTREKPSGP 43
Score = 41.8 bits (99), Expect = 6e-06
Identities = 12/40 (30%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP++C CGKSF L H +H+ P
Sbjct: 3 SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSG 42
Score = 39.4 bits (93), Expect = 4e-05
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S G PY+C+ C K F+ S L H H
Sbjct: 2 SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITH 35
Score = 34.1 bits (79), Expect = 0.003
Identities = 13/48 (27%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S G PY+ CGKSF L H +H+ P +
Sbjct: 2 SSGSSGEGEKPYQ-----CSECGKSFSGSYRLTQHWITHTREKPSGPS 44
>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 66.8 bits (164), Expect = 6e-15
Identities = 15/42 (35%), Positives = 23/42 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG K C C K F+ S+L+ H++IH+GE+P
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 12/42 (28%), Positives = 17/42 (40%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +G + C C K FT S L H+ H +KP
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 47.5 bits (114), Expect = 5e-08
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
CT CGK+F R S L H + HTGEKP
Sbjct: 15 CTECGKAFTRKSTLSMHQKIHTGEKPSGP 43
Score = 40.6 bits (96), Expect = 1e-05
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ K +C CGK+F L H H+G P
Sbjct: 3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSG 42
Score = 38.7 bits (91), Expect = 6e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G ++CT C K F + S L H IH
Sbjct: 2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIH 35
Score = 34.4 bits (80), Expect = 0.002
Identities = 11/48 (22%), Positives = 18/48 (37%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G ++ CGK+F L H H+G P +
Sbjct: 2 SSGSSGTGGKHFECTE-----CGKAFTRKSTLSMHQKIHTGEKPSGPS 44
>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national
project on protein structural and functional analyses;
NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 66.8 bits (164), Expect = 6e-15
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG KP+ C+ C K FS +S L H+R+H+GE+P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 52.2 bits (126), Expect = 1e-09
Identities = 12/44 (27%), Positives = 21/44 (47%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +G +P+ C C K F+ +S L H+ H +KP +
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45
Score = 46.8 bits (112), Expect = 1e-07
Identities = 16/29 (55%), Positives = 18/29 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F + S L RH R HTGEKP
Sbjct: 15 CNECGKAFSQTSKLARHQRVHTGEKPSGP 43
Score = 41.4 bits (98), Expect = 9e-06
Identities = 12/40 (30%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP++C CGK+F L H H+G P
Sbjct: 3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F+++S L H +H
Sbjct: 2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVH 35
Score = 34.8 bits (81), Expect = 0.002
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PY+ + CGK+F L H H+G P +
Sbjct: 2 SSGSSGTGGKPYQCNE-----CGKAFSQTSKLARHQRVHTGEKPSGPS 44
>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear
protein, phosphorylation, polymorphism, repeat,
repressor, transcription; NMR {Homo sapiens}
Length = 46
Score = 66.8 bits (164), Expect = 6e-15
Identities = 15/41 (36%), Positives = 20/41 (48%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ GEK C C FS +SSL H+ +H GE+P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 49.5 bits (119), Expect = 1e-08
Identities = 12/42 (28%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ GE+ C C F+ +S+L H+ HV +KP
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 46.8 bits (112), Expect = 9e-08
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C C F + S L+ H H GEKP
Sbjct: 15 CRECDMCFSQASSLRLHQNVHVGEKPSGP 43
Score = 44.1 bits (105), Expect = 8e-07
Identities = 11/40 (27%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ + +K KC C F +LR H H G P
Sbjct: 3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSG 42
Score = 41.4 bits (98), Expect = 7e-06
Identities = 10/34 (29%), Positives = 18/34 (52%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S G +KC C F+++S+L+ H +H
Sbjct: 2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVH 35
Score = 37.9 bits (89), Expect = 1e-04
Identities = 11/48 (22%), Positives = 15/48 (31%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S G +K C F +LR H H G P +
Sbjct: 2 SSGSSGMGEKTWKCRE-----CDMCFSQASSLRLHQNVHVGEKPSGPS 44
>2ent_A Krueppel-like factor 15; zinc binding, transcription factor,
adipogenesis, CLCNKA, chloride channel Ka, rhodopsin,
IRBP; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 48
Score = 66.6 bits (163), Expect = 8e-15
Identities = 18/43 (41%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Query: 162 HTRTHTGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP C C FS S L+ HRR HSG +P
Sbjct: 3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 53.1 bits (128), Expect = 5e-10
Identities = 14/44 (31%), Positives = 19/44 (43%), Gaps = 2/44 (4%)
Query: 189 THRRIHSGERPHVC--PICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P C P C F+ S L HR +H KP
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45
Score = 48.5 bits (116), Expect = 3e-08
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCD 175
CG F R L RH R+H+G KP
Sbjct: 20 CGWRFSRSDELSRHRRSHSGVKPSGPS 46
Score = 37.3 bits (87), Expect = 3e-04
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 278 THSYSHSGSWPYKCTV--CIKGFAKSSNLKNHMTIH 311
+ S +G P+ CT C F++S L H H
Sbjct: 2 SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSH 37
Score = 35.7 bits (83), Expect = 9e-04
Identities = 14/48 (29%), Positives = 18/48 (37%), Gaps = 3/48 (6%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P+ P CG F L H SHSG P +
Sbjct: 2 SSGSSGTGEKPFACTWPG---CGWRFSRSDELSRHRRSHSGVKPSGPS 46
>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 45
Score = 66.4 bits (163), Expect = 8e-15
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG+KP C C K F +L TH+RIH+GE+
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 52.5 bits (127), Expect = 7e-10
Identities = 12/44 (27%), Positives = 19/44 (43%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
+ +G++P C C K+F A NL H+ H +K
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG 45
Score = 46.8 bits (112), Expect = 1e-07
Identities = 15/29 (51%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
CT CGKSF L H R HTGEK
Sbjct: 15 CTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43
Score = 42.9 bits (102), Expect = 2e-06
Identities = 15/40 (37%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP +C CGKSF GNL TH H+G
Sbjct: 3 SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGP 42
Score = 39.1 bits (92), Expect = 5e-05
Identities = 13/34 (38%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P++CT C K F NL H IH
Sbjct: 2 SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIH 35
Score = 37.5 bits (88), Expect = 2e-04
Identities = 15/48 (31%), Positives = 21/48 (43%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G P++ CGKSF GNL TH H+G +
Sbjct: 2 SSGSSGTGQKPFECTH-----CGKSFRAKGNLVTHQRIHTGEKSGPSS 44
>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 66.0 bits (162), Expect = 1e-14
Identities = 18/41 (43%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F+ +S L HR IH+GE+P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 52.1 bits (126), Expect = 1e-09
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K FT +S+L HR H +KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 47.1 bits (113), Expect = 7e-08
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L RH HTGEKP
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 39.8 bits (94), Expect = 3e-05
Identities = 13/40 (32%), Positives = 18/40 (45%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L H H+G P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42
Score = 38.6 bits (91), Expect = 8e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F ++S+L H IH
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 34.0 bits (79), Expect = 0.003
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK F +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 66.0 bits (162), Expect = 1e-14
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TG+KP+ C+ C K F+ +S L HR IH+GE+P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 52.5 bits (127), Expect = 9e-10
Identities = 14/42 (33%), Positives = 22/42 (52%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +G++P+ C C K FT +S+L HR H +KP
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 46.7 bits (112), Expect = 1e-07
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L RH HTGEKP
Sbjct: 15 CNECGKVFTQNSHLARHRGIHTGEKPSGP 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 13/40 (32%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ KP+KC CGK F +L H H+G P
Sbjct: 3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSG 42
Score = 38.6 bits (91), Expect = 7e-05
Identities = 14/34 (41%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F ++S+L H IH
Sbjct: 2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIH 35
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK F +L H H+G P +
Sbjct: 2 SSGSSGTGKKPYKCNE-----CGKVFTQNSHLARHRGIHTGEKPSGPS 44
>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 46
Score = 66.0 bits (162), Expect = 1e-14
Identities = 17/41 (41%), Positives = 25/41 (60%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGEKP+ C+ C K F+ +S L HRR+H+G +P
Sbjct: 3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 15/42 (35%), Positives = 21/42 (50%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +GE+P+ C C K FT +S+L HR H KP
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 47.1 bits (113), Expect = 6e-08
Identities = 15/29 (51%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F + S L RH R HTG KP
Sbjct: 15 CNECGKVFTQNSHLARHRRVHTGGKPSGP 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 13/41 (31%), Positives = 18/41 (43%)
Query: 217 YHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ +KP+KC CGK F +L H H+G P
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSG 42
Score = 38.3 bits (90), Expect = 1e-04
Identities = 13/34 (38%), Positives = 19/34 (55%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC C K F ++S+L H +H
Sbjct: 2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVH 35
Score = 34.0 bits (79), Expect = 0.004
Identities = 14/48 (29%), Positives = 20/48 (41%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK + CGK F +L H H+G P +
Sbjct: 2 SSGSSGTGEKPYKCNE-----CGKVFTQNSHLARHRRVHTGGKPSGPS 44
>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 42
Score = 65.7 bits (161), Expect = 1e-14
Identities = 17/39 (43%), Positives = 22/39 (56%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
+ + GEKP+ CD C K FS SL H R+H+G P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 47.2 bits (113), Expect = 7e-08
Identities = 11/39 (28%), Positives = 15/39 (38%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPH 228
GE+P+ C C K F+ +L H H P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 43.3 bits (103), Expect = 2e-06
Identities = 14/39 (35%), Positives = 21/39 (53%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPY 256
+ +KP++C CGK+F G+L H H+GS P
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 43.3 bits (103), Expect = 2e-06
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C CGK+F + L H R HTG P
Sbjct: 14 CDQCGKAFSQKGSLIVHIRVHTGSGPS 40
Score = 39.9 bits (94), Expect = 2e-05
Identities = 12/33 (36%), Positives = 18/33 (54%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S S G PY+C C K F++ +L H+ +H
Sbjct: 2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVH 34
Score = 32.9 bits (76), Expect = 0.006
Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPY 289
S S G PY+ CGK+F G+L H H+GS P
Sbjct: 2 SSGSSGGEKPYRCDQ-----CGKAFSQKGSLIVHIRVHTGSGPS 40
>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET:
ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB:
3znf_A 4znf_A
Length = 57
Score = 66.3 bits (161), Expect = 2e-14
Identities = 19/53 (35%), Positives = 29/53 (54%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
C CG +PS+LK+H RTHT +P+ C C+ F T +L H + + +
Sbjct: 4 CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 52.0 bits (124), Expect = 2e-09
Identities = 16/55 (29%), Positives = 23/55 (41%)
Query: 172 HVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDK 226
++C+ C S L H R H+ RP+ C C +F NL H + K
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56
Score = 48.9 bits (116), Expect = 2e-08
Identities = 16/46 (34%), Positives = 19/46 (41%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
CG P L+ H +H+ PY CT C F NL HM
Sbjct: 7 CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52
Score = 47.4 bits (112), Expect = 7e-08
Identities = 18/53 (33%), Positives = 23/53 (43%)
Query: 200 HVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
++C C S L H TH +P+ C C SF T GNL H S +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54
Score = 46.6 bits (110), Expect = 1e-07
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 5/58 (8%)
Query: 228 HKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+ C CG P L+ H +H+ PY C SF T GNL H S +
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTHTDVRPYH-----CTYCNFSFKTKGNLTKHMKSKAH 54
Score = 25.8 bits (56), Expect = 3.5
Identities = 9/23 (39%), Positives = 10/23 (43%)
Query: 289 YKCTVCIKGFAKSSNLKNHMTIH 311
Y C C K S LK H+ H
Sbjct: 2 YICEECGIRXKKPSMLKKHIRTH 24
>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 46
Score = 65.6 bits (161), Expect = 2e-14
Identities = 12/41 (29%), Positives = 19/41 (46%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GE+P+ C+ C K F S L H + H E+
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 51.4 bits (124), Expect = 2e-09
Identities = 14/43 (32%), Positives = 19/43 (44%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
SGERP+ C C K F S+L H H ++K +
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSS 45
Score = 50.6 bits (122), Expect = 5e-09
Identities = 12/29 (41%), Positives = 14/29 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F R S L H + H EK
Sbjct: 15 CNECGKNFGRHSHLIEHLKRHFREKSSGP 43
Score = 40.2 bits (95), Expect = 2e-05
Identities = 13/33 (39%), Positives = 16/33 (48%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S SG PY C C K F + S+L H+ H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRH 35
Score = 37.9 bits (89), Expect = 1e-04
Identities = 9/40 (22%), Positives = 15/40 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ ++P+ C CGK+F +L H H
Sbjct: 3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSG 42
Score = 32.9 bits (76), Expect = 0.007
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 5/47 (10%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
S SG PY CGK+F +L H H +
Sbjct: 3 SGSSGSGERPYG-----CNECGKNFGRHSHLIEHLKRHFREKSSGPS 44
>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens}
Length = 46
Score = 65.6 bits (161), Expect = 2e-14
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ G P+ C C K FS L H+R+H+ E+P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 48.7 bits (117), Expect = 2e-08
Identities = 11/42 (26%), Positives = 19/42 (45%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKC 230
+ +G P+ C C K+F+ L H+ H ++KP
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 46.0 bits (110), Expect = 2e-07
Identities = 13/29 (44%), Positives = 14/29 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ C KSF L H R HT EKP
Sbjct: 15 CSQCEKSFSGKLRLLVHQRMHTREKPSGP 43
Score = 42.9 bits (102), Expect = 2e-06
Identities = 11/40 (27%), Positives = 14/40 (35%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ P+KC C KSF L H H+ P
Sbjct: 3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSG 42
Score = 39.8 bits (94), Expect = 3e-05
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PYKC+ C K F+ L H +H
Sbjct: 2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMH 35
Score = 36.7 bits (86), Expect = 4e-04
Identities = 13/48 (27%), Positives = 17/48 (35%), Gaps = 5/48 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
+ S +G PYK C KSF L H H+ P +
Sbjct: 2 SSGSSGAGVNPYK-----CSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44
>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding,
metal-binding, nuclear protein, repeat, transcription,
transcription regulation; NMR {Homo sapiens} SCOP:
k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A
Length = 42
Score = 65.2 bits (160), Expect = 2e-14
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 164 RTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+GE P+ C C K F+ L +H+R H+GE
Sbjct: 3 SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 51.0 bits (123), Expect = 3e-09
Identities = 13/41 (31%), Positives = 16/41 (39%)
Query: 191 RRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
SGE P+ C C K F L H+ TH + G
Sbjct: 2 SSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG 42
Score = 49.0 bits (118), Expect = 1e-08
Identities = 13/29 (44%), Positives = 16/29 (55%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ CGK+F+R L H RTH GE
Sbjct: 13 CSECGKAFNRKDQLISHQRTHAGESGPSS 41
Score = 39.4 bits (93), Expect = 3e-05
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ P++C CGK+F L +H +H+G
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPS 40
Score = 36.0 bits (84), Expect = 6e-04
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 282 SHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
SG PY+C+ C K F + L +H H
Sbjct: 4 GSSGENPYECSECGKAFNRKDQLISHQRTH 33
Score = 32.9 bits (76), Expect = 0.007
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 5/43 (11%)
Query: 249 SHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
SG PY+ CGK+F L +H +H+G
Sbjct: 4 GSSGENPYECSE-----CGKAFNRKDQLISHQRTHAGESGPSS 41
>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 65.2 bits (160), Expect = 2e-14
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ TGE P+ C C K FS L +H++ HSG+
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 51.0 bits (123), Expect = 3e-09
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
+ +GE P+ C C K F+ L H+ TH G
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG 44
Score = 47.9 bits (115), Expect = 4e-08
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK F R L H +TH+G+
Sbjct: 15 CCECGKVFSRKDQLVSHQKTHSGQSGPSS 43
Score = 39.0 bits (92), Expect = 5e-05
Identities = 11/40 (27%), Positives = 17/40 (42%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ + P++C CGK F L +H +HSG
Sbjct: 3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPS 42
Score = 37.5 bits (88), Expect = 2e-04
Identities = 11/34 (32%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G PY+C C K F++ L +H H
Sbjct: 2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTH 35
Score = 30.5 bits (70), Expect = 0.054
Identities = 13/47 (27%), Positives = 18/47 (38%), Gaps = 5/47 (10%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
+ S +G PY+ CGK F L +H +HSG
Sbjct: 2 SSGSSGTGENPYECCE-----CGKVFSRKDQLVSHQKTHSGQSGPSS 43
>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 64.9 bits (159), Expect = 3e-14
Identities = 16/41 (39%), Positives = 22/41 (53%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEK H CD C K F S+L H+R+H GE+
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43
Score = 48.4 bits (116), Expect = 2e-08
Identities = 13/43 (30%), Positives = 18/43 (41%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
SGE+ H C C K F S L H+ H+ +K +
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS 45
Score = 43.7 bits (104), Expect = 1e-06
Identities = 13/30 (43%), Positives = 15/30 (50%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C CGK+F S L+ H R H GEK
Sbjct: 15 CDECGKNFCYISALRIHQRVHMGEKCSGPS 44
Score = 41.8 bits (99), Expect = 5e-06
Identities = 15/47 (31%), Positives = 18/47 (38%), Gaps = 3/47 (6%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVG 264
+ +K H C CGK+F LR H H G PS G
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSG---PSSG 46
Score = 38.7 bits (91), Expect = 6e-05
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S SG + C C K F S L+ H +H
Sbjct: 3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVH 35
Score = 31.4 bits (72), Expect = 0.027
Identities = 12/47 (25%), Positives = 15/47 (31%), Gaps = 5/47 (10%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
S SG + CGK+F LR H H G +
Sbjct: 3 SGSSGSGEKSHTCDE-----CGKNFCYISALRIHQRVHMGEKCSGPS 44
>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
k.12.1.1
Length = 47
Score = 63.7 bits (156), Expect = 7e-14
Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 1/43 (2%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGERPHVCP 203
+ TG+KP+ C C K F ++SL H R H+GE+P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
Score = 53.0 bits (128), Expect = 7e-10
Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYH-RITHVKDKPHKCGA 232
+ +G++P+ C C K F +++L H R H +KP +
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSS 46
Score = 43.3 bits (103), Expect = 1e-06
Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTR-THTGEKPHVC 174
C CGK+F + + L RH R HTGEKP
Sbjct: 15 CIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44
Score = 37.9 bits (89), Expect = 1e-04
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 1/41 (2%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHS-YSHSGSWPYK 257
+ KP++C CGK+F +L H Y H+G P
Sbjct: 3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSG 43
Score = 35.2 bits (82), Expect = 0.001
Identities = 11/35 (31%), Positives = 18/35 (51%), Gaps = 1/35 (2%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHM-TIH 311
+ S +G PY+C C K F ++++L H H
Sbjct: 2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYH 36
Score = 31.8 bits (73), Expect = 0.019
Identities = 14/49 (28%), Positives = 21/49 (42%), Gaps = 6/49 (12%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHS-YSHSGSWPYKCT 292
+ S +G PY+ CGK+F +L H Y H+G P +
Sbjct: 2 SSGSSGTGKKPYECIE-----CGKAFIQNTSLIRHWRYYHTGEKPSGPS 45
>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 62.9 bits (154), Expect = 2e-13
Identities = 15/40 (37%), Positives = 22/40 (55%)
Query: 163 TRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP C C K FS+ S L H++ H+ E+P
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 48.7 bits (117), Expect = 2e-08
Identities = 12/29 (41%), Positives = 15/29 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C+ C K+F S L H +TH EKP
Sbjct: 13 CSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41
Score = 46.0 bits (110), Expect = 2e-07
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGA 232
SGE+P C C K F++ S L H+ TH ++KP +
Sbjct: 3 SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSS 43
Score = 39.1 bits (92), Expect = 6e-05
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+KP C C K+F + L H +H+ P
Sbjct: 4 GSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSG 40
Score = 36.0 bits (84), Expect = 7e-04
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 280 SYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S SG P+ C+ C K F+ S L H H
Sbjct: 2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTH 33
Score = 33.7 bits (78), Expect = 0.004
Identities = 11/46 (23%), Positives = 17/46 (36%), Gaps = 5/46 (10%)
Query: 247 SYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCT 292
S SG P+ C K+F + L H +H+ P +
Sbjct: 2 SSGSSGEKPFGCSC-----CEKAFSSKSYLLVHQQTHAEEKPSGPS 42
>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens} PDB: 2yta_A
Length = 42
Score = 61.9 bits (151), Expect = 4e-13
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
+ + GE P++C C K F+ SL H+R S P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 45.0 bits (107), Expect = 4e-07
Identities = 11/40 (27%), Positives = 18/40 (45%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHK 229
GE P++C C K+FT +L H+ + + P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 43.8 bits (104), Expect = 1e-06
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C CGKSF + L H R+ + P
Sbjct: 14 CGQCGKSFTQRGSLAVHQRSCSQSGPS 40
Score = 41.1 bits (97), Expect = 8e-06
Identities = 15/40 (37%), Positives = 19/40 (47%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
+ + P+ CG CGKSF G+L H S S S P
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
Score = 40.3 bits (95), Expect = 2e-05
Identities = 11/33 (33%), Positives = 13/33 (39%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S S G PY C C K F + +L H
Sbjct: 2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSC 34
Score = 34.2 bits (79), Expect = 0.003
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYK 290
S S G PY G CGKSF G+L H S S S P
Sbjct: 2 SSGSSGGETPYL-----CGQCGKSFTQRGSLAVHQRSCSQSGPSS 41
>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural
genomics, NPPSFA; NMR {Homo sapiens}
Length = 95
Score = 60.8 bits (147), Expect = 3e-12
Identities = 18/67 (26%), Positives = 23/67 (34%), Gaps = 9/67 (13%)
Query: 145 PCTVCGKSFDRPSLLKRH-TRTHTGEKPHVCDVCS--------KGFSTSSSLNTHRRIHS 195
P C ++F L H T H G VC K F L H R+H+
Sbjct: 27 PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86
Query: 196 GERPHVC 202
GE+
Sbjct: 87 GEKSGPS 93
Score = 60.8 bits (147), Expect = 4e-12
Identities = 18/75 (24%), Positives = 22/75 (29%), Gaps = 9/75 (12%)
Query: 165 THTGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGERPHV--------CPICFKTFTASSNL 215
+ C + FST L TH H G CP K+F A L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 216 YYHRITHVKDKPHKC 230
H H +K
Sbjct: 79 VNHIRVHTGEKSGPS 93
Score = 46.5 bits (110), Expect = 4e-07
Identities = 17/76 (22%), Positives = 23/76 (30%), Gaps = 4/76 (5%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTH-SYSHSGSWPYKIHA---PSVGACGKSFPTPGNL 276
+C ++F T L TH + H G H GKSF L
Sbjct: 19 IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKL 78
Query: 277 RTHSYSHSGSWPYKCT 292
H H+G +
Sbjct: 79 VNHIRVHTGEKSGPSS 94
Score = 27.2 bits (60), Expect = 2.3
Identities = 5/27 (18%), Positives = 8/27 (29%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMT 309
C + F+ L H+T
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVT 46
>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 41
Score = 58.7 bits (143), Expect = 5e-12
Identities = 13/38 (34%), Positives = 19/38 (50%)
Query: 163 TRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
+ +G++ + C C K F SL H RIH+G P
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 44.1 bits (105), Expect = 7e-07
Identities = 13/27 (48%), Positives = 14/27 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C CGKSF + L H R HTG P
Sbjct: 13 CQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.8 bits (86), Expect = 3e-04
Identities = 13/36 (36%), Positives = 18/36 (50%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPY 256
+ ++C CGKSF G+L H H+GS P
Sbjct: 4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 36.8 bits (86), Expect = 3e-04
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPH 228
SG+R + C C K+F +L H H P
Sbjct: 3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39
Score = 35.6 bits (83), Expect = 9e-04
Identities = 12/32 (37%), Positives = 15/32 (46%)
Query: 280 SYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S SG Y+C C K F + +L H IH
Sbjct: 2 SSGSSGQRVYECQECGKSFRQKGSLTLHERIH 33
Score = 28.3 bits (64), Expect = 0.29
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 5/43 (11%)
Query: 247 SYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPY 289
S SG Y+ CGKSF G+L H H+GS P
Sbjct: 2 SSGSSGQRVYECQE-----CGKSFRQKGSLTLHERIHTGSGPS 39
>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 42
Score = 56.9 bits (138), Expect = 2e-11
Identities = 11/40 (27%), Positives = 22/40 (55%)
Query: 163 TRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ +GEKP+ C C + FS ++ L H+++H+ +
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 41.9 bits (99), Expect = 5e-06
Identities = 12/40 (30%), Positives = 19/40 (47%)
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
SGE+P+ C C +TF+ ++ L H+ H G
Sbjct: 3 SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG 42
Score = 39.6 bits (93), Expect = 3e-05
Identities = 7/29 (24%), Positives = 13/29 (44%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C C ++F + L +H + HT +
Sbjct: 13 CAECKETFSDNNRLVQHQKMHTVKSGPSS 41
Score = 36.5 bits (85), Expect = 3e-04
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 280 SYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S SG PY C C + F+ ++ L H +H
Sbjct: 2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMH 33
Score = 32.7 bits (75), Expect = 0.009
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
+KP+ C C ++F L H H+
Sbjct: 4 GSSGEKPYSCAECKETFSDNNRLVQHQKMHTV 35
Score = 24.6 bits (54), Expect = 7.9
Identities = 10/45 (22%), Positives = 13/45 (28%), Gaps = 5/45 (11%)
Query: 247 SYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
S SG PY C ++F L H H+
Sbjct: 2 SSGSSGEKPYS-----CAECKETFSDNNRLVQHQKMHTVKSGPSS 41
>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens} SCOP: k.12.1.1
Length = 44
Score = 56.4 bits (137), Expect = 3e-11
Identities = 10/41 (24%), Positives = 18/41 (43%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
+ T K + C+ C K F+ L H++IH+ +
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 45.3 bits (108), Expect = 3e-07
Identities = 9/42 (21%), Positives = 15/42 (35%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
+ + + C C K FT +L H+ H + G
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG 44
Score = 39.1 bits (92), Expect = 5e-05
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVC 174
C CGK+F R L RH + HT +
Sbjct: 15 CNECGKAFTRIFHLTRHQKIHTRKSGPSS 43
Score = 36.0 bits (84), Expect = 6e-04
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S + S Y C C K F + +L H IH
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35
Score = 34.5 bits (80), Expect = 0.002
Identities = 9/35 (25%), Positives = 14/35 (40%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
+ K + C CGK+F +L H H+
Sbjct: 3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37
Score = 24.8 bits (55), Expect = 6.5
Identities = 10/46 (21%), Positives = 15/46 (32%), Gaps = 5/46 (10%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKC 291
S + S Y + CGK+F +L H H+
Sbjct: 3 SGSSGTDSKSYNCNE-----CGKAFTRIFHLTRHQKIHTRKSGPSS 43
>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 48
Score = 55.3 bits (133), Expect = 1e-10
Identities = 13/43 (30%), Positives = 19/43 (44%)
Query: 163 TRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
+ K C++C K F LN H+ HSGE+P+
Sbjct: 4 GSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 51.5 bits (123), Expect = 2e-09
Identities = 14/45 (31%), Positives = 22/45 (48%)
Query: 134 AKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCS 178
+ ++ + C +CGK F L RH +H+GEKP+ S
Sbjct: 3 SGSSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47
Score = 45.7 bits (108), Expect = 3e-07
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGAC 233
+ C IC K F +L H+++H +KP+ G
Sbjct: 5 SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 38.4 bits (89), Expect = 1e-04
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPY 256
K C CGK F +L H SHSG PY
Sbjct: 11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 41
Score = 33.4 bits (76), Expect = 0.007
Identities = 12/29 (41%), Positives = 13/29 (44%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVC 294
CGK F +L H SHSG PY
Sbjct: 18 CGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46
Score = 31.8 bits (72), Expect = 0.022
Identities = 7/24 (29%), Positives = 9/24 (37%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
C +C K F +L H H
Sbjct: 12 QVACEICGKIFRDVYHLNRHKLSH 35
>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 73
Score = 55.4 bits (133), Expect = 2e-10
Identities = 18/74 (24%), Positives = 24/74 (32%), Gaps = 7/74 (9%)
Query: 183 TSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGN 242
+S S ++IH G+R C C F S T + K C C K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRS-------TLSRRKTPMCEKCRKDSCQEAA 54
Query: 243 LRTHSYSHSGSWPY 256
L + SG
Sbjct: 55 LNKDEGNESGKKTS 68
Score = 49.7 bits (118), Expect = 2e-08
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 7/55 (12%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
C+ CG F R S T + K +C+ C K ++LN SG++
Sbjct: 21 CSKCGIIFIRRS-------TLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68
Score = 41.6 bits (97), Expect = 1e-05
Identities = 14/79 (17%), Positives = 21/79 (26%), Gaps = 12/79 (15%)
Query: 211 ASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSF 270
+S + + H+ D+ KC CG F + S C K
Sbjct: 2 SSGSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEK-----CRKDS 49
Query: 271 PTPGNLRTHSYSHSGSWPY 289
L + SG
Sbjct: 50 CQEAALNKDEGNESGKKTS 68
Score = 41.2 bits (96), Expect = 2e-05
Identities = 12/73 (16%), Positives = 17/73 (23%), Gaps = 12/73 (16%)
Query: 239 TPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGF 298
+ G+ H G K CG F + S C C K
Sbjct: 2 SSGSSGKRQKIHLGDRSQK-----CSKCGIIF-------IRRSTLSRRKTPMCEKCRKDS 49
Query: 299 AKSSNLKNHMTIH 311
+ + L
Sbjct: 50 CQEAALNKDEGNE 62
>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger,
transcription factor, DNA binding protein; NMR {Mus
musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A
Length = 37
Score = 53.5 bits (129), Expect = 3e-10
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIH 194
TR TG KP C C + FS S L HR+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 43.1 bits (102), Expect = 2e-06
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHV 223
R +G +P CP C ++F+ S +L HR H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 38.5 bits (90), Expect = 8e-05
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ +G P++C C + F++S +L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.0 bits (68), Expect = 0.064
Identities = 8/21 (38%), Positives = 10/21 (47%)
Query: 146 CTVCGKSFDRPSLLKRHTRTH 166
C C +SF R L H + H
Sbjct: 14 CPDCDRSFSRSDHLALHRKRH 34
Score = 27.7 bits (62), Expect = 0.55
Identities = 9/30 (30%), Positives = 12/30 (40%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSH 250
KP +C C +SF +L H H
Sbjct: 5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid
binding, KIAA1227 protein, structural genomics; NMR
{Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1
Length = 107
Score = 54.1 bits (129), Expect = 1e-09
Identities = 17/90 (18%), Positives = 29/90 (32%), Gaps = 3/90 (3%)
Query: 132 RKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHR 191
+K + C +C H R VC CS F + H
Sbjct: 5 SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE 62
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRIT 221
+ C C +TF +S +++ H++
Sbjct: 63 S-KCEYKKLTCLECMRTFKSSFSIWRHQVE 91
Score = 48.4 bits (114), Expect = 1e-07
Identities = 16/79 (20%), Positives = 32/79 (40%), Gaps = 3/79 (3%)
Query: 168 GEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKP 227
++ + C +C+ S+ +H R+ VCP C F + H + + K
Sbjct: 13 NKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHE-SKCEYKK 69
Query: 228 HKCGACGKSFPTPGNLRTH 246
C C ++F + ++ H
Sbjct: 70 LTCLECMRTFKSSFSIWRH 88
Score = 36.4 bits (83), Expect = 0.002
Identities = 14/88 (15%), Positives = 28/88 (31%), Gaps = 9/88 (10%)
Query: 225 DKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHS 284
+ ++C C + +H +A C F +P + H
Sbjct: 14 KEVYQCRLCNAKLSSLLEQGSHERLCR-------NAAVCPYCSLRFFSPELKQEHESKCE 66
Query: 285 GSWPYKCTVCIKGFAKSSNLKNH-MTIH 311
C C++ F S ++ H + +H
Sbjct: 67 YK-KLTCLECMRTFKSSFSIWRHQVEVH 93
>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}
Length = 129
Score = 54.2 bits (129), Expect = 2e-09
Identities = 21/88 (23%), Positives = 33/88 (37%), Gaps = 2/88 (2%)
Query: 131 SRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTH 190
++K + ++ + S VC +C FS+S SL H
Sbjct: 34 QLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQH 93
Query: 191 RRIHSGERPHVCPICFKTFTASSNLYYH 218
R E VCP+C K FT++ + H
Sbjct: 94 IRYT--EHTKVCPVCKKEFTSTDSALDH 119
Score = 42.2 bits (98), Expect = 3e-05
Identities = 22/130 (16%), Positives = 33/130 (25%), Gaps = 19/130 (14%)
Query: 154 DRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVC----PICFKTF 209
D S K++ H G HV H+ +R I
Sbjct: 5 DVDSGSKKYLSNHKGIFIHVT--------LEELKRYHQLTPEQKRLIRAIVKTLIHNPQL 56
Query: 210 TASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKS 269
S+ Y + C C F + +L+ H H C K
Sbjct: 57 LDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE-------HTKVCPVCKKE 109
Query: 270 FPTPGNLRTH 279
F + + H
Sbjct: 110 FTSTDSALDH 119
Score = 41.8 bits (97), Expect = 3e-05
Identities = 18/126 (14%), Positives = 37/126 (29%), Gaps = 13/126 (10%)
Query: 189 THRRIHSGERPHVCP--ICFKTFTASSNLYYHRITHVKDKPHKC----GACGKSFPTPGN 242
T + SG + ++ F T YH++T + + + +
Sbjct: 2 TESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESS 61
Query: 243 LRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSS 302
+ + C F + +L+ H C VC K F +
Sbjct: 62 YLYRLLASKAISQF-----VCPLCLMPFSSSVSLKQHIRYTEH--TKVCPVCKKEFTSTD 114
Query: 303 NLKNHM 308
+ +H+
Sbjct: 115 SALDHV 120
Score = 34.5 bits (78), Expect = 0.011
Identities = 14/86 (16%), Positives = 26/86 (30%), Gaps = 3/86 (3%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
HK R H + + ++ + L S +
Sbjct: 15 SNHK--GIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAI 72
Query: 286 SWPYKCTVCIKGFAKSSNLKNHMTIH 311
S + C +C+ F+ S +LK H+
Sbjct: 73 S-QFVCPLCLMPFSSSVSLKQHIRYT 97
>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 44
Score = 51.0 bits (122), Expect = 3e-09
Identities = 10/40 (25%), Positives = 16/40 (40%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
+ GE P C C + F+ + L H R H+ +
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 38.7 bits (90), Expect = 6e-05
Identities = 10/34 (29%), Positives = 17/34 (50%)
Query: 278 THSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ S +G P+KC+ C + F + + L H H
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTH 35
Score = 37.1 bits (86), Expect = 3e-04
Identities = 12/43 (27%), Positives = 17/43 (39%)
Query: 189 THRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCG 231
+ +GE P C C + FT + L H TH + G
Sbjct: 2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG 44
Score = 36.8 bits (85), Expect = 3e-04
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C+ C + F + + L +H RTH +
Sbjct: 15 CSKCDRVFTQRNYLVQHERTHARKSGP 41
Score = 35.2 bits (81), Expect = 0.001
Identities = 8/35 (22%), Positives = 13/35 (37%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
+ + P KC C + F L H +H+
Sbjct: 3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHAR 37
Score = 27.5 bits (61), Expect = 0.76
Identities = 9/41 (21%), Positives = 15/41 (36%), Gaps = 5/41 (12%)
Query: 245 THSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+ S +G P+K C + F L H +H+
Sbjct: 2 SSGSSGAGENPFK-----CSKCDRVFTQRNYLVQHERTHAR 37
>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase,
methyltransferase, guanylyltransferase, zinc finger,
icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1
PDB: 2cse_V
Length = 1275
Score = 47.9 bits (113), Expect = 2e-06
Identities = 11/77 (14%), Positives = 20/77 (25%), Gaps = 1/77 (1%)
Query: 119 TKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCS 178
+ + N + + P T + T + + C VCS
Sbjct: 129 NANELSRSGNVDNEGGSNQKPMST-RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCS 187
Query: 179 KGFSTSSSLNTHRRIHS 195
+ L+ H H
Sbjct: 188 AVLFSPLDLDAHVASHG 204
Score = 37.1 bits (85), Expect = 0.007
Identities = 8/57 (14%), Positives = 16/57 (28%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDK 226
+ + S S + S + C +C + +L H +H
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHG 207
Score = 36.0 bits (82), Expect = 0.018
Identities = 21/145 (14%), Positives = 41/145 (28%), Gaps = 6/145 (4%)
Query: 113 ARPLDLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPH 172
A T+SA + +N KK ++ L + ++ + K
Sbjct: 60 ASVQRATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQ 119
Query: 173 VCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRI------THVKDK 226
V + + + + + G S+ + H T
Sbjct: 120 VTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGH 179
Query: 227 PHKCGACGKSFPTPGNLRTHSYSHS 251
++C C +P +L H SH
Sbjct: 180 GYQCHVCSAVLFSPLDLDAHVASHG 204
Score = 34.1 bits (77), Expect = 0.062
Identities = 22/196 (11%), Positives = 45/196 (22%), Gaps = 5/196 (2%)
Query: 117 DLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDV 176
K ++ + + P T + +R R +
Sbjct: 12 SSGKGNDSTERSDDGSSQLRDKQNNKAGPATTEPGTSNREQY---RARPGIASVQRATES 68
Query: 177 CSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKS 236
++ T + + V A K K +
Sbjct: 69 AELP-MKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQKQAKDTDKSKAQVTYSDTGI 127
Query: 237 FPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRT-HSYSHSGSWPYKCTVCI 295
R+ + + G K + + + + R + S Y+C VC
Sbjct: 128 NNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCS 187
Query: 296 KGFAKSSNLKNHMTIH 311
+L H+ H
Sbjct: 188 AVLFSPLDLDAHVASH 203
Score = 28.7 bits (63), Expect = 3.6
Identities = 17/157 (10%), Positives = 41/157 (26%), Gaps = 4/157 (2%)
Query: 131 SRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTH 190
+R+ + P + + + + + + S+ +
Sbjct: 49 NREQYRARPGIASVQRATESAELPMKNNDEGTPDKKGNTRGDLVNEHSEAKDEADEATQK 108
Query: 191 RRIHSGE-RPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYS 249
+ + + + V A+ + + K + + T + H +
Sbjct: 109 QAKDTDKSKAQVTYSDTGINNANELSRSGNVDNEGGSNQKPMSTRIAEATSAIVSKHP-A 167
Query: 250 HSGSWPY--KIHAPSVGACGKSFPTPGNLRTHSYSHS 284
G P H C +P +L H SH
Sbjct: 168 RVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHG 204
>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A
1are_A
Length = 29
Score = 42.3 bits (100), Expect = 3e-06
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C VC ++F R LKRH R+HT EK
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 38.5 bits (90), Expect = 7e-05
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
+ VC+VC++ F+ L H R H+ E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.7 bits (70), Expect = 0.033
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDK 226
R VC +C + F +L H +H +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 30.0 bits (68), Expect = 0.074
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
+ C VC + FA+ +LK H H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
Score = 29.6 bits (67), Expect = 0.097
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
+ C C ++F +L+ H SH+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens}
SCOP: g.37.1.1 PDB: 1va2_A
Length = 31
Score = 40.3 bits (95), Expect = 1e-05
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEK 170
CGK F R L+RH RTHTGEK
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 38.7 bits (91), Expect = 5e-05
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 170 KPHVCDV--CSKGFSTSSSLNTHRRIHSGER 198
+P +C C K F+ S L H+R H+GE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 29.5 bits (67), Expect = 0.10
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
P+ CT C K F +S L+ H H
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 27.6 bits (62), Expect = 0.42
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 198 RPHVC--PICFKTFTASSNLYYHRITHVKDK 226
RP +C C K FT S L H+ TH +K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.6 bits (57), Expect = 2.7
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 226 KPHKCG--ACGKSFPTPGNLRTHSYSHSG 252
+P C CGK F L+ H +H+G
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding
protein; NMR {Homo sapiens}
Length = 37
Score = 39.6 bits (93), Expect = 3e-05
Identities = 13/34 (38%), Positives = 19/34 (55%), Gaps = 2/34 (5%)
Query: 167 TGEKPHVCDV--CSKGFSTSSSLNTHRRIHSGER 198
+K H+C + C K + +S L H R H+GER
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 38.9 bits (91), Expect = 6e-05
Identities = 11/22 (50%), Positives = 15/22 (68%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEK 170
CGK + + S L+ H R HTGE+
Sbjct: 16 CGKVYGKTSHLRAHLRWHTGER 37
Score = 32.3 bits (74), Expect = 0.009
Identities = 9/34 (26%), Positives = 17/34 (50%), Gaps = 2/34 (5%)
Query: 195 SGERPHVCPI--CFKTFTASSNLYYHRITHVKDK 226
++ H+C I C K + +S+L H H ++
Sbjct: 4 GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37
Score = 30.0 bits (68), Expect = 0.082
Identities = 8/26 (30%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
+ C + C K + K+S+L+ H+ H
Sbjct: 8 QHICHIQGCGKVYGKTSHLRAHLRWH 33
Score = 29.2 bits (66), Expect = 0.14
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 224 KDKPHKC--GACGKSFPTPGNLRTHSYSHSG 252
K K H C CGK + +LR H H+G
Sbjct: 5 KKKQHICHIQGCGKVYGKTSHLRAHLRWHTG 35
Score = 26.2 bits (58), Expect = 2.0
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 257 KIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
K H + CGK + +LR H H+G
Sbjct: 7 KQHICHIQGCGKVYGKTSHLRAHLRWHTG 35
>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
classical zinc finger, transcription; NMR {Homo sapiens}
Length = 30
Score = 36.3 bits (83), Expect = 4e-04
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
KP+VC C + F+ +L H RIH+GE+
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
Score = 34.3 bits (78), Expect = 0.002
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C C + F P L+RH R HTGEK
Sbjct: 6 CIHCQRQFADPGALQRHVRIHTGEK 30
Score = 33.2 bits (75), Expect = 0.004
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
KP+ C C + F PG L+ H H+G
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTG 28
Score = 28.2 bits (62), Expect = 0.32
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
PY C C + FA L+ H+ IH
Sbjct: 3 PYVCIHCQRQFADPGALQRHVRIH 26
Score = 25.1 bits (54), Expect = 3.9
Identities = 8/20 (40%), Positives = 11/20 (55%)
Query: 266 CGKSFPTPGNLRTHSYSHSG 285
C + F PG L+ H H+G
Sbjct: 9 CQRQFADPGALQRHVRIHTG 28
Score = 25.1 bits (54), Expect = 4.5
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDK 226
+P+VC C + F L H H +K
Sbjct: 2 KPYVCIHCQRQFADPGALQRHVRIHTGEK 30
>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 29
Score = 33.6 bits (76), Expect = 0.004
Identities = 14/29 (48%), Positives = 19/29 (65%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
KP C +C K F+ +SSL H R H+GE+
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 32.4 bits (73), Expect = 0.008
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C +CGK+F + S L H R HTGEK
Sbjct: 5 CVMCGKAFTQASSLIAHVRQHTGEK 29
Score = 25.1 bits (54), Expect = 4.0
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
KP +C CGK+F +L H H+G
Sbjct: 1 KPCQCVMCGKAFTQASSLIAHVRQHTG 27
>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 46
Score = 33.3 bits (75), Expect = 0.007
Identities = 13/31 (41%), Positives = 16/31 (51%)
Query: 165 THTGEKPHVCDVCSKGFSTSSSLNTHRRIHS 195
+ EK C+ C K FS S L H RIH+
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 25.2 bits (54), Expect = 5.4
Identities = 9/29 (31%), Positives = 12/29 (41%)
Query: 139 PSKTMLPCTVCGKSFDRPSLLKRHTRTHT 167
+ C C K+F L +H R HT
Sbjct: 8 QKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 25.2 bits (54), Expect = 5.8
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHS 251
+ K+K KC C K+F L H H+
Sbjct: 6 SGQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36
Score = 24.4 bits (52), Expect = 9.0
Identities = 10/31 (32%), Positives = 13/31 (41%)
Query: 194 HSGERPHVCPICFKTFTASSNLYYHRITHVK 224
E+ C C KTF+ S L H H +
Sbjct: 7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTR 37
>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription;
NMR {Mus musculus} SCOP: g.37.1.1
Length = 35
Score = 32.8 bits (74), Expect = 0.007
Identities = 9/30 (30%), Positives = 19/30 (63%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHS 195
+G++P VC +C F+T ++ H ++H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHT 31
Score = 31.3 bits (70), Expect = 0.026
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 194 HSGERPHVCPICFKTFTASSNLYYHRITH 222
SG+RP VC IC FT +N H H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 29.7 bits (66), Expect = 0.11
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
SG P+ C +C+ F +N H+ +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 36.8 bits (84), Expect = 0.008
Identities = 42/284 (14%), Positives = 75/284 (26%), Gaps = 96/284 (33%)
Query: 2 DIVENDSSAVSSRQHHRQLNIVNNIPIKQGVVLYQSDCQ-LITYDLKGL-----PSSSTN 55
I + S+ + L ++ N+ + + C+ L+T K + +++T+
Sbjct: 229 SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTH 288
Query: 56 TDIIHWI------EVLSYLRK-------GLPSSSTNT--------------DIIHW---- 84
+ H EV S L K LP T + W
Sbjct: 289 ISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWK 348
Query: 85 --------------IEVLS-------Y--LRVFLVQEANVVISLDSLQRYWARPLDLTKS 121
+ VL + L VF + I L W D+ KS
Sbjct: 349 HVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF---PPSAHIPTILLSLIWF---DVIKS 402
Query: 122 ATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHV-CDVCSKG 180
+ N+ + SL+++ + T P + ++ K
Sbjct: 403 DVMVVVNKLHKY-----------------------SLVEKQPKESTISIPSIYLELKVK- 438
Query: 181 FSTSSSLNTHRRIHSGERPHVCPICFKTFTASS--NLYYHRITH 222
+ HR I +Y I H
Sbjct: 439 --LENEYALHRSIVDHYNIPKT-FDSDDLIPPYLDQYFYSHIGH 479
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 37.0 bits (85), Expect = 0.009
Identities = 51/365 (13%), Positives = 93/365 (25%), Gaps = 130/365 (35%)
Query: 9 SAVSSRQ---HHRQLNIVNNIPIKQGVVLYQSDCQLITYD--LKGLPSSSTN-------T 56
A S+R H L V +P + QL + K LP + T
Sbjct: 2 DAYSTRPLTLSHGSLEHVLLVPTA----SFFIASQL--QEQFNKILPEPTEGFAADDEPT 55
Query: 57 DIIH-WIEVLSYL-RKGLPSSSTNTDIIHWIEVLSYL-----RVFLVQEANV---VISLD 106
+ L Y+ PS D +VL+ +L + ++ L
Sbjct: 56 TPAELVGKFLGYVSSLVEPSKVGQFD-----QVLNLCLTEFENCYL-EGNDIHALAAKLL 109
Query: 107 SLQR-------------YWARPLDLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCG--- 150
AR + + + + R + + ++ + + G
Sbjct: 110 QENDTTLVKTKELIKNYITARIM-AKRPFDKKSNSALFRAVGEGN-AQLV---AIFGGQG 164
Query: 151 ---KSFD---------RP----------SLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLN 188
F+ L RT + ++G + L
Sbjct: 165 NTDDYFEELRDLYQTYHVLVGDLIKFSAETLSELIRTTLDAEKV----FTQGLNILEWLE 220
Query: 189 THRRIHSGERPHV-----CPICFK--TFTASSNLYYHRITHVKDKPHKCGACGKSFPTPG 241
+ P PI ++ Y +T G TPG
Sbjct: 221 -----NPSNTPDKDYLLSIPISCPLIGVIQLAH-YV--VT--------AKLLGF---TPG 261
Query: 242 NLRTHSY---------------SHSGSWP--YKIHAPSVGACGKSFPTPGNLRTH-SYSH 283
LR++ + + SW + A F G +R + +Y +
Sbjct: 262 ELRSYLKGATGHSQGLVTAVAIAETDSWESFFVS---VRKAITVLFFI-G-VRCYEAYPN 316
Query: 284 SGSWP 288
+ P
Sbjct: 317 TSLPP 321
>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA,
metal-binding, transcription; NMR {Mus musculus}
Length = 28
Score = 32.5 bits (73), Expect = 0.009
Identities = 12/27 (44%), Positives = 17/27 (62%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSG 196
+P+ C VC K FS + TH R+H+G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.7 bits (58), Expect = 0.92
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTG 168
C+VCGK F ++ H R HTG
Sbjct: 6 CSVCGKRFSLKHQMETHYRVHTG 28
Score = 26.7 bits (58), Expect = 0.96
Identities = 10/27 (37%), Positives = 14/27 (51%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
+P+ C CGK F + TH H+G
Sbjct: 2 RPYSCSVCGKRFSLKHQMETHYRVHTG 28
>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 45
Score = 32.2 bits (72), Expect = 0.016
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSG 196
+GEKP+ C VC F ++ H R H G
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 35
Score = 32.2 bits (72), Expect = 0.018
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 194 HSGERPHVCPICFKTFTASSNLYYHRITH 222
SGE+P+ CP+C F + YH +H
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 28.3 bits (62), Expect = 0.33
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 280 SYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S SG PY C VC F + + H+ H
Sbjct: 2 SSGSSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33
Score = 27.2 bits (59), Expect = 0.87
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 222 HVKDKPHKCGACGKSFPTPGNLRTHSYSHSGS 253
+KP+ C CG F + H SH GS
Sbjct: 5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 36
Score = 26.8 bits (58), Expect = 1.3
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTG 168
C VCG F R + H R+H G
Sbjct: 12 SCPVCGLRFKRKDRMSYHVRSHDG 35
>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 46
Score = 32.1 bits (72), Expect = 0.019
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 167 TGEKPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
+ EK H C C + F SL H+ +H G++
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQK 39
Score = 29.0 bits (64), Expect = 0.22
Identities = 10/29 (34%), Positives = 15/29 (51%)
Query: 224 KDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
++K H+C CG+ F +L H H G
Sbjct: 9 REKSHQCRECGEIFFQYVSLIEHQVLHMG 37
Score = 26.3 bits (57), Expect = 2.1
Identities = 10/35 (28%), Positives = 16/35 (45%)
Query: 195 SGERPHVCPICFKTFTASSNLYYHRITHVKDKPHK 229
S E+ H C C + F +L H++ H+ K
Sbjct: 8 SREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSG 42
>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 31.7 bits (71), Expect = 0.020
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
K H+CD+C K F + +L +H+ +H+ +
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 27.9 bits (61), Expect = 0.39
Identities = 11/27 (40%), Positives = 15/27 (55%)
Query: 225 DKPHKCGACGKSFPTPGNLRTHSYSHS 251
K H C CGK F + G L++H H+
Sbjct: 7 GKTHLCDMCGKKFKSKGTLKSHKLLHT 33
Score = 27.5 bits (60), Expect = 0.69
Identities = 10/31 (32%), Positives = 16/31 (51%)
Query: 195 SGERPHVCPICFKTFTASSNLYYHRITHVKD 225
S + H+C +C K F + L H++ H D
Sbjct: 5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD 35
Score = 24.4 bits (52), Expect = 7.9
Identities = 10/24 (41%), Positives = 12/24 (50%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE 169
C +CGK F LK H HT +
Sbjct: 12 CDMCGKKFKSKGTLKSHKLLHTAD 35
>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA
motif, metal binding protein; NMR {Synthetic} SCOP:
g.37.1.3 PDB: 2l1o_A
Length = 39
Score = 31.3 bits (71), Expect = 0.026
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
+ + C C + F ++ +L H +H +R
Sbjct: 5 RSYTCSFCKREFRSAQALGGHMNVHRRDR 33
Score = 29.7 bits (67), Expect = 0.091
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 287 WP---YKCTVCIKGFAKSSNLKNHMTIH 311
WP Y C+ C + F + L HM +H
Sbjct: 2 WPPRSYTCSFCKREFRSAQALGGHMNVH 29
>3ray_A PR domain-containing protein 11; structural genomics consortium,
SGC, histone methylation, Zn transcriptional regulation,
chromatin, transcription; 1.73A {Homo sapiens}
Length = 237
Score = 34.0 bits (77), Expect = 0.044
Identities = 7/49 (14%), Positives = 10/49 (20%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIH 194
K S H GEK + + L +
Sbjct: 183 SEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 30.6 bits (68), Expect = 0.54
Identities = 13/60 (21%), Positives = 18/60 (30%), Gaps = 2/60 (3%)
Query: 189 THRRIHSGERPHV--CPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTH 246
R I GE V K + S HR +K + + P +LR
Sbjct: 168 ACRDIRPGEWLRVWYSEDYMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGP 227
Score = 28.6 bits (63), Expect = 2.4
Identities = 4/46 (8%), Positives = 11/46 (23%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
K + H G + + +L+ + +
Sbjct: 186 YMKRLHSMSQETIHRNLARGEKRLQREKSEQVLDNPEDLRGPIHLS 231
Score = 27.9 bits (61), Expect = 4.4
Identities = 4/36 (11%), Positives = 10/36 (27%)
Query: 135 KKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEK 170
+ + + L + D P L+ +
Sbjct: 200 RNLARGEKRLQREKSEQVLDNPEDLRGPIHLSVLRQ 235
>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA,
national project on protein structural and functional
analyses; NMR {Homo sapiens}
Length = 44
Score = 31.0 bits (69), Expect = 0.046
Identities = 14/30 (46%), Positives = 15/30 (50%)
Query: 140 SKTMLPCTVCGKSFDRPSLLKRHTRTHTGE 169
+KT C CGK F SLL H H GE
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGE 38
Score = 26.8 bits (58), Expect = 1.1
Identities = 11/30 (36%), Positives = 15/30 (50%)
Query: 168 GEKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
+ C C K F SS L H+ +H+GE
Sbjct: 9 AKTTSECQECGKIFRHSSLLIEHQALHAGE 38
>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers,
4-stranded parallel/anti-parallel beta- sheet,
structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1
g.37.1.1
Length = 102
Score = 32.1 bits (72), Expect = 0.050
Identities = 12/79 (15%), Positives = 23/79 (29%), Gaps = 5/79 (6%)
Query: 184 SSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITH----VKDKPHKCGACGKSFPT 239
+ +++ E + C C + +H + V + + C C
Sbjct: 3 HHHHHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKR 62
Query: 240 PGNLRTH-SYSHSGSWPYK 257
L H H G +K
Sbjct: 63 YDALSEHNLKYHPGEENFK 81
Score = 29.4 bits (65), Expect = 0.53
Identities = 14/82 (17%), Positives = 24/82 (29%), Gaps = 6/82 (7%)
Query: 126 AENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRT-HTG---EKPHVCDVCSKGF 181
A + + K C C ++ H + H +VC C+
Sbjct: 2 AHHHHHHNQQNKKVEGG-YECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLT 60
Query: 182 STSSSLNTH-RRIHSGERPHVC 202
+L+ H + H GE
Sbjct: 61 KRYDALSEHNLKYHPGEENFKL 82
Score = 27.0 bits (59), Expect = 3.4
Identities = 8/32 (25%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 146 CTVCGKSFDRPSLLKRH-TRTHTGEKPHVCDV 176
C C R L H + H GE+ +
Sbjct: 53 CVECNFLTKRYDALSEHNLKYHPGEENFKLTM 84
>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif,
transcription regulation, zinc-finger; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 47
Score = 30.2 bits (68), Expect = 0.075
Identities = 8/28 (28%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 145 PCTV--CGKSFDRPSLLKRHTRTHTGEK 170
C C K+F R ++ H +TH ++
Sbjct: 20 ECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.7 bits (59), Expect = 1.5
Identities = 10/32 (31%), Positives = 16/32 (50%), Gaps = 2/32 (6%)
Query: 197 ERPHVCPI--CFKTFTASSNLYYHRITHVKDK 226
++ C C KTF N+ H TH++D+
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 26.0 bits (57), Expect = 2.7
Identities = 7/26 (26%), Positives = 14/26 (53%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
++C C K F + N+++H+ H
Sbjct: 18 TFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 25.2 bits (55), Expect = 5.6
Identities = 10/28 (35%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 225 DKPHKC--GACGKSFPTPGNLRTHSYSH 250
DK +C C K+F N+R+H +H
Sbjct: 16 DKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 24.8 bits (54), Expect = 6.9
Identities = 7/18 (38%), Positives = 11/18 (61%)
Query: 266 CGKSFPTPGNLRTHSYSH 283
C K+F N+R+H +H
Sbjct: 26 CTKTFKRRYNIRSHIQTH 43
>3k1f_M Transcription initiation factor IIB; RNA polymerase II, TFIIB,
transcription factor, DNA-binding, DNA-directed RNA
polymerase; 4.30A {Saccharomyces cerevisiae}
Length = 197
Score = 32.7 bits (74), Expect = 0.079
Identities = 11/51 (21%), Positives = 21/51 (41%), Gaps = 7/51 (13%)
Query: 127 ENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
E+ R ++ +L C C P +++R + G+ VC +C
Sbjct: 5 ESIDKRAGRRGPNLNIVLTCPECKV--YPPKIVERFSE---GD--VVCALC 48
>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.8 bits (66), Expect = 0.084
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 167 TGEKPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
+ KP+ C CS + ++LN H R H+GE+
Sbjct: 5 SSGKPYKCPQCSYASAIKANLNVHLRKHTGEK 36
Score = 25.9 bits (56), Expect = 2.5
Identities = 10/27 (37%), Positives = 13/27 (48%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
KP+KC C + NL H H+G
Sbjct: 8 KPYKCPQCSYASAIKANLNVHLRKHTG 34
Score = 24.4 bits (52), Expect = 9.1
Identities = 12/30 (40%), Positives = 14/30 (46%)
Query: 282 SHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S S PYKC C A +NL H+ H
Sbjct: 3 SGSSGKPYKCPQCSYASAIKANLNVHLRKH 32
>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc
finger domain, structural genomics, NPPSFA; NMR {Homo
sapiens} SCOP: g.37.1.1
Length = 66
Score = 30.2 bits (67), Expect = 0.14
Identities = 10/24 (41%), Positives = 11/24 (45%)
Query: 230 CGACGKSFPTPGNLRTHSYSHSGS 253
CG CGK F LR H H +
Sbjct: 16 CGLCGKVFTDANRLRQHEAQHGVT 39
Score = 29.8 bits (66), Expect = 0.19
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 143 MLPCTVCGKSFDRPSLLKRHTRTH 166
+LPC +CGK F + L++H H
Sbjct: 13 ILPCGLCGKVFTDANRLRQHEAQH 36
Score = 26.7 bits (58), Expect = 2.5
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 262 SVGACGKSFPTPGNLRTHSYSHSGS 286
G CGK F LR H H +
Sbjct: 15 PCGLCGKVFTDANRLRQHEAQHGVT 39
>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 29.0 bits (64), Expect = 0.16
Identities = 12/31 (38%), Positives = 14/31 (45%)
Query: 140 SKTMLPCTVCGKSFDRPSLLKRHTRTHTGEK 170
S + C C K F L+ H R HT EK
Sbjct: 6 SGKIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
Score = 27.5 bits (60), Expect = 0.64
Identities = 12/29 (41%), Positives = 16/29 (55%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
K C+ C+K F SL H RIH+ E+
Sbjct: 8 KIFTCEYCNKVFKFKHSLQAHLRIHTNEK 36
>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain,
structural genomics, NPPSFA; NMR {Homo sapiens} SCOP:
g.37.1.1 g.37.1.1
Length = 96
Score = 30.2 bits (67), Expect = 0.22
Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 2/56 (3%)
Query: 173 VCDVCSK-GFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKP 227
C C G T L H + C C K + + + YH + + P
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 26.0 bits (56), Expect = 6.7
Identities = 12/56 (21%), Positives = 19/56 (33%), Gaps = 2/56 (3%)
Query: 201 VCPIC-FKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWP 255
CP C L H ++ C CGK + ++ H ++ S P
Sbjct: 36 SCPTCQAVGRKTIEGLKKHMENCKQE-MFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
Score = 25.6 bits (55), Expect = 9.4
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 140 SKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKP 171
+ M C CGK + +K H + P
Sbjct: 59 KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLP 90
>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 32
Score = 28.4 bits (63), Expect = 0.24
Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 2/29 (6%)
Query: 169 EKPHVCDV--CSKGFSTSSSLNTHRRIHS 195
++P+ CD C K F + L H++ H
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29
Score = 26.5 bits (58), Expect = 1.4
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 149 CGKSFDRPSLLKRHTRTHT 167
C K+F R L RH ++H
Sbjct: 11 CDKAFVRNHDLIRHKKSHQ 29
Score = 25.7 bits (56), Expect = 2.2
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 197 ERPHVC--PICFKTFTASSNLYYHRITHVK 224
+RP+ C P C K F + +L H+ +H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 25.0 bits (54), Expect = 4.2
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
PY C C K F ++ +L H H
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28
>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger,
transcription; NMR {Homo sapiens}
Length = 26
Score = 28.5 bits (63), Expect = 0.25
Identities = 13/25 (52%), Positives = 15/25 (60%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIH 194
KP+VC+ C K F SS L H R H
Sbjct: 1 KPYVCERCGKRFVQSSQLANHIRHH 25
Score = 25.8 bits (56), Expect = 1.9
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
PY C C K F +SS L NH+ H
Sbjct: 2 PYVCERCGKRFVQSSQLANHIRHH 25
>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 75
Score = 29.2 bits (65), Expect = 0.38
Identities = 15/70 (21%), Positives = 21/70 (30%), Gaps = 3/70 (4%)
Query: 157 SLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLY 216
S H T + VC C S L H + G R +C C +L
Sbjct: 3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHED-YCGARTELCGNC-GRNVLVKDLK 59
Query: 217 YHRITHVKDK 226
H ++
Sbjct: 60 THPEVCGREG 69
Score = 25.3 bits (55), Expect = 7.7
Identities = 13/55 (23%), Positives = 19/55 (34%), Gaps = 2/55 (3%)
Query: 184 SSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFP 238
SS + H R VC C + L H + + CG CG++
Sbjct: 2 SSGSSGHEETECPLRLAVCQHCDLELSI-LKLKEH-EDYCGARTELCGNCGRNVL 54
>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A
Length = 29
Score = 27.9 bits (62), Expect = 0.41
Identities = 9/25 (36%), Positives = 10/25 (40%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C C K F R L H H +K
Sbjct: 5 CPECPKRFMRSDHLTLHILLHENKK 29
Score = 26.4 bits (58), Expect = 1.1
Identities = 10/26 (38%), Positives = 12/26 (46%)
Query: 201 VCPICFKTFTASSNLYYHRITHVKDK 226
CP C K F S +L H + H K
Sbjct: 4 ACPECPKRFMRSDHLTLHILLHENKK 29
Score = 25.6 bits (56), Expect = 2.8
Identities = 8/26 (30%), Positives = 11/26 (42%)
Query: 173 VCDVCSKGFSTSSSLNTHRRIHSGER 198
C C K F S L H +H ++
Sbjct: 4 ACPECPKRFMRSDHLTLHILLHENKK 29
Score = 24.1 bits (52), Expect = 9.1
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 289 YKCTVCIKGFAKSSNLKNHMTIH 311
+ C C K F +S +L H+ +H
Sbjct: 3 FACPECPKRFMRSDHLTLHILLH 25
>3pwf_A Rubrerythrin; non heme iron peroxidases, oxidative stress,
oxidoreductase; 1.64A {Pyrococcus furiosus} PDB: 3mps_A
3pza_A 3qvd_A 1nnq_A 2hr5_A
Length = 170
Score = 30.4 bits (68), Expect = 0.44
Identities = 8/34 (23%), Positives = 13/34 (38%), Gaps = 13/34 (38%)
Query: 172 HVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
++C +C G+ E P CP+C
Sbjct: 139 YICPIC--GY-----------TAVDEAPEYCPVC 159
>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron
transfer, DIIR center, oxidoreductase; 1.40A
{Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1
PDB: 1yv1_A 1yux_A
Length = 202
Score = 30.5 bits (68), Expect = 0.44
Identities = 14/56 (25%), Positives = 19/56 (33%), Gaps = 19/56 (33%)
Query: 160 KRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC------FKTF 209
+K H+C +C G+ IH GE CPIC F +
Sbjct: 160 YNDIDAPDDDKFHLCPIC--GY-----------IHKGEDFEKCPICFRPKDTFTAY 202
>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human
papillomavirus, HPV E6 protein, de novo protein; NMR
{Synthetic} SCOP: k.12.1.1
Length = 33
Score = 27.6 bits (61), Expect = 0.47
Identities = 8/26 (30%), Positives = 9/26 (34%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKP 171
C C K F R L +H H
Sbjct: 5 CPECPKRFMRSDHLSKHITLHELLGE 30
Score = 27.6 bits (61), Expect = 0.48
Identities = 9/29 (31%), Positives = 11/29 (37%)
Query: 201 VCPICFKTFTASSNLYYHRITHVKDKPHK 229
CP C K F S +L H H +
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGEER 32
Score = 25.6 bits (56), Expect = 2.5
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 173 VCDVCSKGFSTSSSLNTHRRIHSGERP 199
C C K F S L+ H +H
Sbjct: 4 ACPECPKRFMRSDHLSKHITLHELLGE 30
Score = 24.1 bits (52), Expect = 8.7
Identities = 9/23 (39%), Positives = 14/23 (60%)
Query: 289 YKCTVCIKGFAKSSNLKNHMTIH 311
+ C C K F +S +L H+T+H
Sbjct: 3 FACPECPKRFMRSDHLSKHITLH 25
>3mpx_A FYVE, rhogef and PH domain-containing protein 5; structural
genomics consortium, DH domain, SGC, L binding protein;
2.80A {Homo sapiens}
Length = 434
Score = 30.7 bits (69), Expect = 0.55
Identities = 21/99 (21%), Positives = 34/99 (34%), Gaps = 13/99 (13%)
Query: 136 KKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHS 195
K+ + +V + SL +R +C C FS T RR
Sbjct: 340 YKAQALAAFHHSVEIRERLGVSLGERPPTLVPVTHVMMCMNCGCDFSL-----TLRR--- 391
Query: 196 GERPHVCPICFKTFTASSNLYYHRITHVKDKPHK-CGAC 233
H C C K + + + + ++KD+ K C C
Sbjct: 392 ----HHCHACGKIVCRNCSRNKYPLKYLKDRMAKVCDGC 426
>1g2r_A Hypothetical cytosolic protein; NUSA-INFB operon, structural
genomics, PSI, protein structure initiative; 1.35A
{Streptococcus pneumoniae} SCOP: d.192.1.1
Length = 100
Score = 28.9 bits (65), Expect = 0.59
Identities = 8/35 (22%), Positives = 14/35 (40%), Gaps = 4/35 (11%)
Query: 135 KKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGE 169
+K P + V + D+ LL R + G+
Sbjct: 6 TRKIPLRK---SVVSNEVIDKRDLL-RIVKNKEGQ 36
>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc
finger, gene regulation; NMR {Agrobacterium tumefaciens}
Length = 87
Score = 28.7 bits (64), Expect = 0.60
Identities = 14/36 (38%), Positives = 16/36 (44%), Gaps = 3/36 (8%)
Query: 136 KKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKP 171
+KS + C CG SF LKRH TH P
Sbjct: 14 RKSVQDDHIVCLECGGSF---KSLKRHLTTHHSMTP 46
>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR
{Saccharomyces cerevisiae} SCOP: g.37.1.1
Length = 30
Score = 27.1 bits (60), Expect = 0.61
Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)
Query: 146 CTVCGKSFDRPSLLKRHTRT-HTG 168
C +C ++F R LL RH + H+G
Sbjct: 5 CGLCNRAFTRRDLLIRHAQKIHSG 28
Score = 25.6 bits (56), Expect = 2.4
Identities = 10/28 (35%), Positives = 17/28 (60%), Gaps = 1/28 (3%)
Query: 170 KPHVCDVCSKGFSTSSSLNTH-RRIHSG 196
K + C +C++ F+ L H ++IHSG
Sbjct: 1 KAYACGLCNRAFTRRDLLIRHAQKIHSG 28
>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC),
C2H2, APO metal-binding, nucleus, phosphoprotein,
transcription, TRAN regulation; 1.80A {Homo sapiens}
Length = 48
Score = 27.4 bits (60), Expect = 0.79
Identities = 12/28 (42%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Query: 224 KDKPHKCGACGKSFPTPGNLRTHSYSHS 251
+DKP+ C CGK + L H Y+HS
Sbjct: 4 RDKPYACDICGKRYKNRPGLSYH-YAHS 30
Score = 27.1 bits (59), Expect = 0.99
Identities = 8/24 (33%), Positives = 13/24 (54%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRR 192
+KP+ CD+C K + L+ H
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYA 28
Score = 27.1 bits (59), Expect = 1.1
Identities = 11/44 (25%), Positives = 16/44 (36%)
Query: 197 ERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTP 240
++P+ C IC K + L YH + PTP
Sbjct: 5 DKPYACDICGKRYKNRPGLSYHYAHSHLAEEEGEDKEDSQPPTP 48
>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural
genomics, NPPSFA, national project on protein structural
and functional analyses; NMR {Homo sapiens}
Length = 98
Score = 28.8 bits (63), Expect = 0.84
Identities = 17/71 (23%), Positives = 23/71 (32%), Gaps = 2/71 (2%)
Query: 201 VCPIC--FKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKI 258
VCP C T + + KC C K F + L H+ + + P
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA 85
Query: 259 HAPSVGACGKS 269
A G G S
Sbjct: 86 EASEGGESGPS 96
Score = 27.6 bits (60), Expect = 2.0
Identities = 15/57 (26%), Positives = 20/57 (35%), Gaps = 2/57 (3%)
Query: 173 VCDVCSK-GFSTSSSLNTH-RRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKP 227
VC C+ T L H + C C K F + + L YH + KP
Sbjct: 26 VCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP 82
>1x4u_A Zinc finger, FYVE domain containing 27 isoform B; phosphoinositide
binding, zinc binding, structural genomics, NPPSFA; NMR
{Homo sapiens}
Length = 84
Score = 28.3 bits (63), Expect = 0.88
Identities = 18/71 (25%), Positives = 25/71 (35%), Gaps = 8/71 (11%)
Query: 146 CTVCGKSFDRPSLLKR--HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCP 203
CT C +F S+LK+ + G C C SS+ E VC
Sbjct: 17 CTGCSATF---SVLKKRRSCS-NCGNS--FCSRCCSFKVPKSSMGATAPEAQRETVFVCA 70
Query: 204 ICFKTFTASSN 214
C +T + S
Sbjct: 71 SCNQTLSKSGP 81
>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein,
helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis}
SCOP: g.37.1.4 g.37.1.4
Length = 127
Score = 28.8 bits (63), Expect = 1.2
Identities = 10/84 (11%), Positives = 18/84 (21%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+C C + H S + + + S
Sbjct: 31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGE 90
Query: 286 SWPYKCTVCIKGFAKSSNLKNHMT 309
C VC F+ ++H
Sbjct: 91 DRSKCCPVCNMTFSSPVVAESHYI 114
Score = 27.2 bits (59), Expect = 3.6
Identities = 12/84 (14%), Positives = 22/84 (26%), Gaps = 9/84 (10%)
Query: 170 KPHVCDVCSKGFSTSSSLNTH-------RRIHSGERPHVCPICFKTFTASSNLYYHRITH 222
C VCS + S H ++ + +
Sbjct: 31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDG- 89
Query: 223 VKDKPHKCGACGKSFPTPGNLRTH 246
+D+ C C +F +P +H
Sbjct: 90 -EDRSKCCPVCNMTFSSPVVAESH 112
>3iyl_X VP3; non-enveloped virus, membrane penetration protein, autocleav
myristol group, icosahedral virus; HET: MYR; 3.30A
{Grass carp reovirus} PDB: 3k1q_C 3k1q_B
Length = 1214
Score = 29.4 bits (65), Expect = 1.8
Identities = 8/35 (22%), Positives = 11/35 (31%)
Query: 131 SRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRT 165
+ + C VC F S L H R+
Sbjct: 104 QSMKVTPIVNPSSYVCNVCNARFSTMSALSEHLRS 138
Score = 29.4 bits (65), Expect = 1.9
Identities = 18/76 (23%), Positives = 31/76 (40%), Gaps = 3/76 (3%)
Query: 117 DLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDV 176
D S++V + + + S + T P +K + +VC+V
Sbjct: 65 DSAPSSSVNNDGDIITRPTSDSIAAVANA-TKPAAVVSDPQSMKVTPIVNP--SSYVCNV 121
Query: 177 CSKGFSTSSSLNTHRR 192
C+ FST S+L+ H R
Sbjct: 122 CNARFSTMSALSEHLR 137
>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Mus musculus}
Length = 35
Score = 26.3 bits (57), Expect = 1.8
Identities = 11/25 (44%), Positives = 16/25 (64%)
Query: 284 SGSWPYKCTVCIKGFAKSSNLKNHM 308
SGS Y C +C+K F S L++H+
Sbjct: 3 SGSSGYVCALCLKKFVSSIRLRSHI 27
>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI,
protein structure initiative, center for eukaryotic
structural genomics, CESG; NMR {Homo sapiens} SCOP:
g.37.1.4
Length = 124
Score = 28.1 bits (62), Expect = 1.8
Identities = 11/56 (19%), Positives = 21/56 (37%), Gaps = 4/56 (7%)
Query: 117 DLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPH 172
+L + + + + + P + C C + F + LK H R+ K H
Sbjct: 24 ELRPQGSARPQPDPNAEFDPDLPGGGLHRCLACARYFIDSTNLKTHFRS----KDH 75
Score = 27.0 bits (59), Expect = 4.3
Identities = 9/21 (42%), Positives = 13/21 (61%)
Query: 172 HVCDVCSKGFSTSSSLNTHRR 192
H C C++ F S++L TH R
Sbjct: 51 HRCLACARYFIDSTNLKTHFR 71
Score = 26.6 bits (58), Expect = 6.3
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 200 HVCPICFKTFTASSNLYYHRITHVKDKPHK 229
H C C + F S+NL TH + K HK
Sbjct: 51 HRCLACARYFIDSTNL----KTHFRSKDHK 76
>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics,
NPPSFA, national project on protein structural and
functional analyses; NMR {Homo sapiens}
Length = 36
Score = 26.0 bits (56), Expect = 1.9
Identities = 13/30 (43%), Positives = 16/30 (53%)
Query: 282 SHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
S S P+KC++C SNLK HM H
Sbjct: 3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRH 32
>3u31_A SIR2A, transcriptional regulatory protein SIR2 homologue;
Zn-binding domain, rossmann fold domain; HET: MYK NAD;
2.20A {Plasmodium falciparum} PDB: 3u3d_A* 3jwp_A*
Length = 290
Score = 28.4 bits (64), Expect = 3.0
Identities = 6/30 (20%), Positives = 10/30 (33%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
C C K ++ + T + P C
Sbjct: 157 CCTCNKIVKLNKIMLQKTSHFMHQLPPECP 186
>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding
protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB:
2ab7_A
Length = 29
Score = 25.0 bits (54), Expect = 3.7
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 149 CGKSFDRPSLLKRHTRTHTG 168
CG+SF+ L RH + HTG
Sbjct: 10 CGRSFNDRRKLNRHKKIHTG 29
Score = 23.8 bits (51), Expect = 9.4
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 177 CSKGFSTSSSLNTHRRIHSG 196
C + F+ LN H++IH+G
Sbjct: 10 CGRSFNDRRKLNRHKKIHTG 29
>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR
{Xenopus laevis} SCOP: g.37.1.1
Length = 27
Score = 25.1 bits (54), Expect = 3.8
Identities = 8/22 (36%), Positives = 14/22 (63%)
Query: 174 CDVCSKGFSTSSSLNTHRRIHS 195
C +C + F S+L+ H+R+H
Sbjct: 4 CGLCERSFVEKSALSRHQRVHK 25
Score = 24.7 bits (53), Expect = 4.9
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 146 CTVCGKSFDRPSLLKRHTRTH 166
C +C +SF S L RH R H
Sbjct: 4 CGLCERSFVEKSALSRHQRVH 24
>2vrw_B P95VAV, VAV1, proto-oncogene VAV; lipoprotein, GTP-binding,
metal-binding, phosphoprotein, exchange factor, RAC,
GTPase, membrane domain; 1.85A {Mus musculus} PDB:
3bji_A 1f5x_A
Length = 406
Score = 27.9 bits (62), Expect = 4.4
Identities = 9/56 (16%), Positives = 16/56 (28%), Gaps = 12/56 (21%)
Query: 183 TSSSLNTHRR-IHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSF 237
+++ N H + S E C C +Y ++C C
Sbjct: 340 ENATANGHDFQMFSFEETTSCKACQMLLRG---TFYQG--------YRCYRCRAPA 384
>1q14_A HST2 protein; histone deacetylase, hydrolase; 2.50A {Saccharomyces
cerevisiae} SCOP: c.31.1.5
Length = 361
Score = 27.7 bits (61), Expect = 4.7
Identities = 8/32 (25%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
C CGK + + + CDVC
Sbjct: 147 CIGCGKVYPPQVFKSKLAEHPIKDFVK-CDVC 177
>4dgw_A PRE-mRNA-splicing factor PRP9; zinc finger; 3.11A {Saccharomyces
cerevisiae}
Length = 402
Score = 27.9 bits (61), Expect = 5.2
Identities = 9/22 (40%), Positives = 11/22 (50%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTH 190
K C CS+ F TSS +H
Sbjct: 290 AKGIYCPFCSRWFKTSSVFESH 311
>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation
domain, Zn finger, DNA-binding regulatory protein; NMR
{Homo sapiens} SCOP: g.37.1.1
Length = 38
Score = 25.0 bits (54), Expect = 5.2
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 169 EKPHVCDV--CSKGFSTSSSLNTHRRIH 194
+KP +C C + F+ L H+ H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>1lko_A Rubrerythrin all-iron(II) form; reduced form, DIIRON, four-helix
bundle, rubre like, electron transport; 1.63A
{Desulfovibrio vulgaris} SCOP: a.25.1.1 g.41.5.1 PDB:
1dvb_A 1jyb_A 1b71_A 1lkm_A 1lkp_A 1qyb_A 1s2z_A 1s30_A
1ryt_A
Length = 191
Score = 27.4 bits (60), Expect = 5.5
Identities = 9/45 (20%), Positives = 12/45 (26%), Gaps = 14/45 (31%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGER-PHVCPIC 205
C C G+ +H G P +CP C
Sbjct: 146 RVFLREQATKWRCRNC--GY-----------VHEGTGAPELCPAC 177
>3ax1_A Serrate RNA effector molecule; miRNA processing, protein binding;
2.74A {Arabidopsis thaliana}
Length = 358
Score = 27.7 bits (60), Expect = 6.1
Identities = 9/54 (16%), Positives = 17/54 (31%)
Query: 117 DLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEK 170
+ +AT + + +K K C K F + +H + E
Sbjct: 280 KIDAAATEALDPHVRKIRDEKYGWKYGCGAKGCTKLFHAAEFVYKHLKLKHTEL 333
>1q1a_A HST2 protein; ternary complex, histone deacetylase, 2'-O-ADP
ribose,, gene regulation; HET: ALY OAD; 1.50A
{Saccharomyces cerevisiae} SCOP: c.31.1.5 PDB: 1szd_A*
1szc_A* 2od7_A* 2od9_A* 2qqf_A* 2qqg_A* 1q17_A* 2od2_A*
Length = 289
Score = 27.4 bits (61), Expect = 6.7
Identities = 8/32 (25%), Positives = 11/32 (34%), Gaps = 1/32 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
C CGK + + + CDVC
Sbjct: 139 CIGCGKVYPPQVFKSKLAEHPIKDFVK-CDVC 169
>3gzu_A Inner capsid protein VP2; 7RP, DLP, metal- binding, virion, zinc,
core protein, RNA-binding, icosaderal virus; 3.80A
{Rotavirus A} PDB: 3kz4_A 3n09_A
Length = 800
Score = 27.4 bits (60), Expect = 6.9
Identities = 15/51 (29%), Positives = 24/51 (47%)
Query: 28 IKQGVVLYQSDCQLITYDLKGLPSSSTNTDIIHWIEVLSYLRKGLPSSSTN 78
I QGV++ D QL ++ G + + N D I + +R G + TN
Sbjct: 619 IAQGVIIAYRDMQLERDEMYGYVNIARNLDGFQQINLEELMRTGDYAQITN 669
>3ov0_A Cytochrome C family protein; multiheme cytochrome C, electron
transfer, Fe reduction, GEO sulfurreducens; HET: HEM;
3.20A {Geobacter sulfurreducens}
Length = 318
Score = 27.3 bits (58), Expect = 7.6
Identities = 17/113 (15%), Positives = 24/113 (21%), Gaps = 6/113 (5%)
Query: 138 SPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
M C C + +K C C G SS + + H G
Sbjct: 182 EFHLGMYKCNECHTKLFAYKAGAKRFTMADMDKGKSCGACHNGKDAFSSASDCGKCHPGL 241
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSH 250
+P A + H KC C +
Sbjct: 242 KPAKLTYKTSVGEAYFDHDIHL------SMFKCADCHTKVFKYRKGSAPATMA 288
>1yc5_A NAD-dependent deacetylase; SIR2, sirtuin, SIR2TM, SIRT1,
nicotinamide, hydrolase; HET: ALY; 1.40A {Thermotoga
maritima} SCOP: c.31.1.5 PDB: 2h2d_A* 2h2f_A 2h2g_A*
2h2h_A* 2h2i_A* 2h4f_A* 2h4j_A* 3d4b_A* 3d81_A* 3pdh_A*
2h4h_A* 3jr3_A* 2h59_A*
Length = 246
Score = 26.7 bits (60), Expect = 9.0
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
C C K + ++K + + + P CD C
Sbjct: 124 CVRCEKKYTVEDVIK---KLESSDVPL-CDDC 151
>3pki_A NAD-dependent deacetylase sirtuin-6; ADP ribose, structural
genomics, structural genomics consortium, SGC,
hydrolase; HET: AR6; 2.04A {Homo sapiens} PDB: 3pkj_A*
Length = 355
Score = 27.0 bits (60), Expect = 9.6
Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 5/37 (13%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHV-----CDVC 177
C C + R +++ TG V C
Sbjct: 141 CAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRAC 177
>3k35_A NAD-dependent deacetylase sirtuin-6; rossmann fold, Zn-binding
domain, structural genomics, struc genomics consortium,
SGC, ADP-ribosylation; HET: APR; 2.00A {Homo sapiens}
Length = 318
Score = 26.9 bits (60), Expect = 9.7
Identities = 7/37 (18%), Positives = 11/37 (29%), Gaps = 5/37 (13%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHV-----CDVC 177
C C + R +++ TG V C
Sbjct: 141 CAKCKTQYVRDTVVGTMGLKATGRLCTVAKARGLRAC 177
>1ma3_A SIR2-AF2, transcriptional regulatory protein, SIR2 family;
enzyme-substrate complex, protein binding,
transcription; HET: ALY MES; 2.00A {Archaeoglobus
fulgidus} SCOP: c.31.1.5 PDB: 1s7g_A* 1yc2_A*
Length = 253
Score = 26.8 bits (60), Expect = 9.8
Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 4/32 (12%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
C C +++D ++ + GE P C C
Sbjct: 126 CLDCHETYDWSEFVE---DFNKGEIPR-CRKC 153
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.318 0.132 0.417
Gapped
Lambda K H
0.267 0.0472 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 4,557,581
Number of extensions: 250994
Number of successful extensions: 1962
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1566
Number of HSP's successfully gapped: 940
Length of query: 311
Length of database: 6,701,793
Length adjustment: 93
Effective length of query: 218
Effective length of database: 4,105,140
Effective search space: 894920520
Effective search space used: 894920520
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.4 bits)