RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7185
(311 letters)
>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 33
Score = 57.2 bits (139), Expect = 5e-12
Identities = 18/32 (56%), Positives = 23/32 (71%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
H+GEKP+ C C K FS SS L H+R+H+GE
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33
Score = 44.1 bits (105), Expect = 2e-07
Identities = 15/30 (50%), Positives = 19/30 (63%)
Query: 193 IHSGERPHVCPICFKTFTASSNLYYHRITH 222
IHSGE+P+ C C K F+ SS L H+ H
Sbjct: 1 IHSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 43.8 bits (104), Expect = 3e-07
Identities = 14/29 (48%), Positives = 17/29 (58%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
HSG PY C C K F++SS L H +H
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVH 30
Score = 41.8 bits (99), Expect = 2e-06
Identities = 14/24 (58%), Positives = 17/24 (70%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE 169
C CGK+F R S+L +H R HTGE
Sbjct: 10 CVECGKAFSRSSILVQHQRVHTGE 33
Score = 38.8 bits (91), Expect = 2e-05
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 222 HVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
H +KP+ C CGK+F L H H+G
Sbjct: 2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32
Score = 29.1 bits (66), Expect = 0.048
Identities = 13/36 (36%), Positives = 15/36 (41%), Gaps = 5/36 (13%)
Query: 250 HSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
HSG PY CGK+F L H H+G
Sbjct: 2 HSGEKPYG-----CVECGKAFSRSSILVQHQRVHTG 32
>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing
protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 56.3 bits (136), Expect = 1e-11
Identities = 16/37 (43%), Positives = 20/37 (54%)
Query: 161 RHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
R + + CD C K FS SS L+ HRR H+GE
Sbjct: 2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38
Score = 42.5 bits (100), Expect = 9e-07
Identities = 12/33 (36%), Positives = 16/33 (48%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITH 222
R + C C K+F+ SS+L HR TH
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 40.1 bits (94), Expect = 8e-06
Identities = 11/33 (33%), Positives = 14/33 (42%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ YKC C K F+ SS+L H H
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTH 35
Score = 36.7 bits (85), Expect = 1e-04
Identities = 11/35 (31%), Positives = 17/35 (48%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
+ + +KC CGKSF +L H +H+G
Sbjct: 3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37
Score = 34.4 bits (79), Expect = 8e-04
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE 169
C CGKSF S L +H RTHTGE
Sbjct: 15 CDECGKSFSHSSDLSKHRRTHTGE 38
Score = 25.1 bits (55), Expect = 1.3
Identities = 11/40 (27%), Positives = 15/40 (37%), Gaps = 5/40 (12%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+ YK CGKSF +L H +H+G
Sbjct: 3 SEWQQRERRRYK-----CDECGKSFSHSSDLSKHRRTHTG 37
>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 55.4 bits (134), Expect = 2e-11
Identities = 14/34 (41%), Positives = 18/34 (52%)
Query: 164 RTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
RTHTGEKP+ C C K F L+ H + +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34
Score = 44.3 bits (105), Expect = 2e-07
Identities = 12/31 (38%), Positives = 16/31 (51%)
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRITH 222
R H+GE+P+ C C KTF L H +
Sbjct: 1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 42.4 bits (100), Expect = 9e-07
Identities = 10/29 (34%), Positives = 14/29 (48%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
H+G PY C+ C K F + L H +
Sbjct: 3 HTGEKPYACSHCDKTFRQKQLLDMHFKRY 31
Score = 37.0 bits (86), Expect = 8e-05
Identities = 10/32 (31%), Positives = 14/32 (43%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
TH +KP+ C C K+F L H +
Sbjct: 2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33
Score = 37.0 bits (86), Expect = 9e-05
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C+ C K+F + LL H + +
Sbjct: 11 CSHCDKTFRQKQLLDMHFKRYHDPN 35
Score = 27.3 bits (61), Expect = 0.21
Identities = 9/36 (25%), Positives = 12/36 (33%), Gaps = 5/36 (13%)
Query: 250 HSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
H+G PY C K+F L H +
Sbjct: 3 HTGEKPYA-----CSHCDKTFRQKQLLDMHFKRYHD 33
>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 39
Score = 54.6 bits (132), Expect = 5e-11
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 167 TGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGERPHVCPI 204
+ KP++C C KGFS LN H +++H+ ERPH C +
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 50.8 bits (122), Expect = 1e-09
Identities = 16/32 (50%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 146 CTVCGKSFDRPSLLKRHTR-THTGEKPHVCDV 176
C CGK F RP L H + HT E+PH C V
Sbjct: 8 CQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
Score = 43.8 bits (104), Expect = 3e-07
Identities = 13/37 (35%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Query: 195 SGERPHVCPICFKTFTASSNLYYH-RITHVKDKPHKC 230
S +P++C C K F+ +L H + H ++PHKC
Sbjct: 1 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37
Score = 38.8 bits (91), Expect = 2e-05
Identities = 13/34 (38%), Positives = 18/34 (52%), Gaps = 1/34 (2%)
Query: 225 DKPHKCGACGKSFPTPGNLRTHSYS-HSGSWPYK 257
KP+ C +CGK F P +L H H+ P+K
Sbjct: 3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHK 36
Score = 35.0 bits (81), Expect = 4e-04
Identities = 10/25 (40%), Positives = 15/25 (60%), Gaps = 1/25 (4%)
Query: 288 PYKCTVCIKGFAKSSNLKNHM-TIH 311
PY C C KGF++ +L H+ +H
Sbjct: 5 PYICQSCGKGFSRPDHLNGHIKQVH 29
Score = 32.7 bits (75), Expect = 0.004
Identities = 12/29 (41%), Positives = 15/29 (51%), Gaps = 1/29 (3%)
Query: 266 CGKSFPTPGNLRTHSYS-HSGSWPYKCTV 293
CGK F P +L H H+ P+KC V
Sbjct: 11 CGKGFSRPDHLNGHIKQVHTSERPHKCQV 39
>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 37
Score = 54.4 bits (131), Expect = 7e-11
Identities = 15/33 (45%), Positives = 17/33 (51%)
Query: 162 HTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIH 194
TR TG KP C C + FS S L HR+ H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 44.7 bits (106), Expect = 1e-07
Identities = 12/34 (35%), Positives = 19/34 (55%)
Query: 190 HRRIHSGERPHVCPICFKTFTASSNLYYHRITHV 223
R +G +P CP C ++F+ S +L HR H+
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35
Score = 42.4 bits (100), Expect = 9e-07
Identities = 9/33 (27%), Positives = 17/33 (51%)
Query: 279 HSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
+ +G P++C C + F++S +L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 33.2 bits (76), Expect = 0.002
Identities = 9/33 (27%), Positives = 12/33 (36%)
Query: 218 HRITHVKDKPHKCGACGKSFPTPGNLRTHSYSH 250
KP +C C +SF +L H H
Sbjct: 2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34
Score = 30.5 bits (69), Expect = 0.019
Identities = 8/23 (34%), Positives = 10/23 (43%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTG 168
C C +SF R L H + H
Sbjct: 14 CPDCDRSFSRSDHLALHRKRHML 36
Score = 25.8 bits (57), Expect = 0.85
Identities = 8/38 (21%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 246 HSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSH 283
+ +G P++ C +SF +L H H
Sbjct: 2 STRGSTGIKPFQCPD-----CDRSFSRSDHLALHRKRH 34
>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 53.4 bits (129), Expect = 1e-10
Identities = 13/35 (37%), Positives = 21/35 (60%), Gaps = 1/35 (2%)
Query: 164 RTHTGEKPHVCDVCSKGFSTSSSLNTH-RRIHSGE 197
RTH+GEKP+ C +C F+ S ++ H + H+
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35
Score = 43.8 bits (104), Expect = 4e-07
Identities = 13/31 (41%), Positives = 17/31 (54%)
Query: 192 RIHSGERPHVCPICFKTFTASSNLYYHRITH 222
R HSGE+P+ C IC FT S + H +
Sbjct: 1 RTHSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 39.6 bits (93), Expect = 1e-05
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
HSG PY+C +C F +S +K H+
Sbjct: 3 HSGEKPYECYICHARFTQSGTMKMHILQK 31
Score = 36.1 bits (84), Expect = 2e-04
Identities = 9/32 (28%), Positives = 14/32 (43%)
Query: 221 THVKDKPHKCGACGKSFPTPGNLRTHSYSHSG 252
TH +KP++C C F G ++ H
Sbjct: 2 THSGEKPYECYICHARFTQSGTMKMHILQKHT 33
Score = 33.4 bits (77), Expect = 0.002
Identities = 7/25 (28%), Positives = 11/25 (44%), Gaps = 1/25 (4%)
Query: 146 CTVCGKSFDRPSLLKRHT-RTHTGE 169
C +C F + +K H + HT
Sbjct: 11 CYICHARFTQSGTMKMHILQKHTEN 35
Score = 25.7 bits (57), Expect = 0.98
Identities = 9/36 (25%), Positives = 13/36 (36%), Gaps = 5/36 (13%)
Query: 250 HSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
HSG PY+ + C F G ++ H
Sbjct: 3 HSGEKPYECYI-----CHARFTQSGTMKMHILQKHT 33
>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 53
Score = 53.1 bits (127), Expect = 2e-10
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKTFTASSNLYYHRITH 222
+K + C C K F+ S + H +H G RP+ C +C K F +L H H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 52.8 bits (126), Expect = 4e-10
Identities = 20/46 (43%), Positives = 23/46 (50%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIH 194
CGKSF S RH H G +P+ C VC K F L H +IH
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 48.5 bits (115), Expect = 1e-08
Identities = 20/46 (43%), Positives = 21/46 (45%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
CGKSF H H G PY C VC K F +L HM IH
Sbjct: 8 CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 45.1 bits (106), Expect = 2e-07
Identities = 18/54 (33%), Positives = 26/54 (48%), Gaps = 1/54 (1%)
Query: 197 ERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSFPTPGNLRTHSYSH 250
++ + C C K+FT S H H+ +P+ CG CGK F +L H H
Sbjct: 1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53
Score = 38.5 bits (89), Expect = 4e-05
Identities = 21/59 (35%), Positives = 23/59 (38%), Gaps = 6/59 (10%)
Query: 225 DKPHKCGACGKSFPTPGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSH 283
DK + C CGKSF H H G PY G CGK F +L H H
Sbjct: 1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYG-----CGVCGKKFKMKHHLVGHMKIH 53
Score = 32.3 bits (73), Expect = 0.005
Identities = 9/21 (42%), Positives = 10/21 (47%)
Query: 146 CTVCGKSFDRPSLLKRHTRTH 166
C VCGK F L H + H
Sbjct: 33 CGVCGKKFKMKHHLVGHMKIH 53
>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 36
Score = 49.0 bits (117), Expect = 5e-09
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 145 PCTVCGKSFDRPSLLKRHTRTHTGEKPHVCD 175
P CGKSF+ LK H + H+ + ++C+
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35
Score = 43.2 bits (102), Expect = 5e-07
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 174 CDVCSKGFSTSSSLNTHRRIHSGERPHVC 202
C K F+ L H ++HS R ++C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 35.5 bits (82), Expect = 3e-04
Identities = 8/29 (27%), Positives = 12/29 (41%)
Query: 202 CPICFKTFTASSNLYYHRITHVKDKPHKC 230
P C K+F +L H H + + C
Sbjct: 6 EPACGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 34.3 bits (79), Expect = 9e-04
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPYKC 291
CGKSF +L+ H HS + Y C
Sbjct: 9 CGKSFNFKKHLKEHMKLHSDTRDYIC 34
Score = 31.6 bits (72), Expect = 0.008
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 229 KCGACGKSFPTPGNLRTHSYSHSGSWPYK 257
ACGKSF +L+ H HS + Y
Sbjct: 5 PEPACGKSFNFKKHLKEHMKLHSDTRDYI 33
Score = 29.3 bits (66), Expect = 0.048
Identities = 9/25 (36%), Positives = 12/25 (48%), Gaps = 2/25 (8%)
Query: 289 YKCT--VCIKGFAKSSNLKNHMTIH 311
+ C C K F +LK HM +H
Sbjct: 2 FSCPEPACGKSFNFKKHLKEHMKLH 26
>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 29
Score = 46.8 bits (112), Expect = 2e-08
Identities = 10/29 (34%), Positives = 17/29 (58%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
+ VC+VC++ F+ L H R H+ E+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 45.3 bits (108), Expect = 9e-08
Identities = 14/25 (56%), Positives = 17/25 (68%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C VC ++F R LKRH R+HT EK
Sbjct: 5 CEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 39.1 bits (92), Expect = 1e-05
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
+ C VC + FA+ +LK H H
Sbjct: 2 SFVCEVCTRAFARQEHLKRHYRSH 25
Score = 35.7 bits (83), Expect = 2e-04
Identities = 7/27 (25%), Positives = 13/27 (48%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
+ C C ++F +L+ H SH+
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTN 27
Score = 34.5 bits (80), Expect = 6e-04
Identities = 9/29 (31%), Positives = 14/29 (48%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDK 226
R VC +C + F +L H +H +K
Sbjct: 1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29
Score = 25.3 bits (56), Expect = 1.0
Identities = 6/20 (30%), Positives = 11/20 (55%)
Query: 266 CGKSFPTPGNLRTHSYSHSG 285
C ++F +L+ H SH+
Sbjct: 8 CTRAFARQEHLKRHYRSHTN 27
>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 47
Score = 46.9 bits (111), Expect = 3e-08
Identities = 6/46 (13%), Positives = 16/46 (34%), Gaps = 3/46 (6%)
Query: 155 RPSLLKRHTRTHTGEKPHVCDVCSKG--FSTSSSLNTHRRIHSGER 198
+ ++ + +K C F ++ +H + H +R
Sbjct: 3 PRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 34.1 bits (78), Expect = 0.001
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEK 170
C K+F R ++ H +TH ++
Sbjct: 26 CTKTFKRRYNIRSHIQTHLEDR 47
Score = 33.0 bits (75), Expect = 0.003
Identities = 6/41 (14%), Positives = 16/41 (39%), Gaps = 3/41 (7%)
Query: 273 PGNLRTHSYSHSGSWPYKCTVCIKG--FAKSSNLKNHMTIH 311
G++ + ++C F + N+++H+ H
Sbjct: 4 RGSIDKY-VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTH 43
Score = 31.8 bits (72), Expect = 0.008
Identities = 10/44 (22%), Positives = 20/44 (45%), Gaps = 3/44 (6%)
Query: 185 SSLNTHRRIHSGERPHVCPICF--KTFTASSNLYYHRITHVKDK 226
S++ + + ++ C KTF N+ H TH++D+
Sbjct: 5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47
Score = 28.7 bits (64), Expect = 0.090
Identities = 10/45 (22%), Positives = 17/45 (37%), Gaps = 2/45 (4%)
Query: 210 TASSNLYYHRITHVKDKPHKCGAC--GKSFPTPGNLRTHSYSHSG 252
T + + DK +C K+F N+R+H +H
Sbjct: 1 TLPRGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45
Score = 26.8 bits (59), Expect = 0.43
Identities = 9/46 (19%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Query: 240 PGNLRTHSYSHSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
G++ + ++ P C K+F N+R+H +H
Sbjct: 4 RGSIDKY-VKEMPDKTFECLFPG---CTKTFKRRYNIRSHIQTHLE 45
>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 46.5 bits (111), Expect = 3e-08
Identities = 13/28 (46%), Positives = 17/28 (60%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSG 196
+KP C +C + FS S L TH R H+G
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 39.1 bits (92), Expect = 1e-05
Identities = 11/23 (47%), Positives = 14/23 (60%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTG 168
C +C ++F R L H RTHTG
Sbjct: 6 CRICMRNFSRSDHLTTHIRTHTG 28
Score = 38.7 bits (91), Expect = 2e-05
Identities = 8/24 (33%), Positives = 17/24 (70%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
P++C +C++ F++S +L H+ H
Sbjct: 3 PFQCRICMRNFSRSDHLTTHIRTH 26
Score = 35.7 bits (83), Expect = 2e-04
Identities = 10/26 (38%), Positives = 15/26 (57%)
Query: 197 ERPHVCPICFKTFTASSNLYYHRITH 222
++P C IC + F+ S +L H TH
Sbjct: 1 QKPFQCRICMRNFSRSDHLTTHIRTH 26
Score = 35.3 bits (82), Expect = 3e-04
Identities = 10/27 (37%), Positives = 16/27 (59%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
KP +C C ++F +L TH +H+G
Sbjct: 2 KPFQCRICMRNFSRSDHLTTHIRTHTG 28
Score = 24.9 bits (55), Expect = 1.3
Identities = 7/20 (35%), Positives = 12/20 (60%)
Query: 266 CGKSFPTPGNLRTHSYSHSG 285
C ++F +L TH +H+G
Sbjct: 9 CMRNFSRSDHLTTHIRTHTG 28
>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 35
Score = 45.1 bits (107), Expect = 1e-07
Identities = 9/32 (28%), Positives = 19/32 (59%)
Query: 166 HTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
+G++P VC +C F+T ++ H ++H+
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 37.8 bits (88), Expect = 5e-05
Identities = 9/29 (31%), Positives = 15/29 (51%)
Query: 283 HSGSWPYKCTVCIKGFAKSSNLKNHMTIH 311
SG P+ C +C+ F +N H+ +H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 36.7 bits (85), Expect = 1e-04
Identities = 13/29 (44%), Positives = 15/29 (51%)
Query: 194 HSGERPHVCPICFKTFTASSNLYYHRITH 222
SG+RP VC IC FT +N H H
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVH 30
Score = 32.4 bits (74), Expect = 0.003
Identities = 7/24 (29%), Positives = 11/24 (45%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE 169
C +C +F + RH + HT
Sbjct: 10 CRICLSAFTTKANCARHLKVHTDT 33
Score = 32.0 bits (73), Expect = 0.005
Identities = 8/32 (25%), Positives = 12/32 (37%)
Query: 222 HVKDKPHKCGACGKSFPTPGNLRTHSYSHSGS 253
+P C C +F T N H H+ +
Sbjct: 2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33
Score = 26.6 bits (59), Expect = 0.35
Identities = 9/37 (24%), Positives = 13/37 (35%), Gaps = 5/37 (13%)
Query: 250 HSGSWPYKIHAPSVGACGKSFPTPGNLRTHSYSHSGS 286
SG P+ C +F T N H H+ +
Sbjct: 2 SSGKRPFV-----CRICLSAFTTKANCARHLKVHTDT 33
>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 44.6 bits (106), Expect = 1e-07
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
K C C K F S L+ H + H ++
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 42.7 bits (101), Expect = 7e-07
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C C K F R L +H +TH +K
Sbjct: 5 CPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 37.7 bits (88), Expect = 5e-05
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
+ C C K F +S +L H+ H
Sbjct: 2 KFACPECPKRFMRSDHLSKHIKTH 25
Score = 33.5 bits (77), Expect = 0.001
Identities = 8/27 (29%), Positives = 10/27 (37%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSG 252
K C C K F +L H +H
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQN 27
Score = 30.8 bits (70), Expect = 0.011
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDK 226
+ CP C K F S +L H TH K
Sbjct: 1 KKFACPECPKRFMRSDHLSKHIKTHQNKK 29
Score = 23.1 bits (50), Expect = 5.8
Identities = 6/20 (30%), Positives = 8/20 (40%)
Query: 266 CGKSFPTPGNLRTHSYSHSG 285
C K F +L H +H
Sbjct: 8 CPKRFMRSDHLSKHIKTHQN 27
>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 31
Score = 42.7 bits (101), Expect = 8e-07
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 170 KPHVCDV--CSKGFSTSSSLNTHRRIHSGER 198
+P +C C K F+ S L H+R H+GE+
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 40.8 bits (96), Expect = 3e-06
Identities = 15/22 (68%), Positives = 16/22 (72%)
Query: 149 CGKSFDRPSLLKRHTRTHTGEK 170
CGK F R L+RH RTHTGEK
Sbjct: 10 CGKRFTRSDELQRHKRTHTGEK 31
Score = 34.6 bits (80), Expect = 6e-04
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
P+ CT C K F +S L+ H H
Sbjct: 2 PFMCTWSYCGKRFTRSDELQRHKRTH 27
Score = 31.1 bits (71), Expect = 0.010
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 226 KPHKCGA--CGKSFPTPGNLRTHSYSHSG 252
+P C CGK F L+ H +H+G
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29
Score = 29.2 bits (66), Expect = 0.048
Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 198 RPHVC--PICFKTFTASSNLYYHRITHVKDK 226
RP +C C K FT S L H+ TH +K
Sbjct: 1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31
Score = 25.4 bits (56), Expect = 1.1
Identities = 9/31 (29%), Positives = 13/31 (41%), Gaps = 3/31 (9%)
Query: 255 PYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
P+ CGK F L+ H +H+G
Sbjct: 2 PFMCTWSY---CGKRFTRSDELQRHKRTHTG 29
>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 30
Score = 41.9 bits (99), Expect = 1e-06
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 170 KPHVCDV--CSKGFSTSSSLNTHRRIHSGE 197
KPH C C K +S +L TH R H+GE
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30
Score = 38.5 bits (90), Expect = 2e-05
Identities = 12/21 (57%), Positives = 14/21 (66%)
Query: 149 CGKSFDRPSLLKRHTRTHTGE 169
C KS+ R LK H R+HTGE
Sbjct: 10 CRKSYSRLENLKTHLRSHTGE 30
Score = 34.2 bits (79), Expect = 7e-04
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
P+KCT C K +++ NLK H+ H
Sbjct: 2 PHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 31.9 bits (73), Expect = 0.004
Identities = 15/29 (51%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 226 KPHKC--GACGKSFPTPGNLRTHSYSHSG 252
KPHKC C KS+ NL+TH SH+G
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29
Score = 29.6 bits (67), Expect = 0.031
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 198 RPHVC--PICFKTFTASSNLYYHRITH 222
+PH C C K+++ NL H +H
Sbjct: 1 KPHKCTFEGCRKSYSRLENLKTHLRSH 27
Score = 25.8 bits (57), Expect = 0.76
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 255 PYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
P+K C KS+ NL+TH SH+G
Sbjct: 2 PHKCTFEG---CRKSYSRLENLKTHLRSHTG 29
>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 32
Score = 41.9 bits (99), Expect = 2e-06
Identities = 9/31 (29%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 169 EKPHVCDV--CSKGFSTSSSLNTHRRIHSGE 197
++P+ CD C K F + L H++ H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31
Score = 35.0 bits (81), Expect = 4e-04
Identities = 8/21 (38%), Positives = 12/21 (57%)
Query: 149 CGKSFDRPSLLKRHTRTHTGE 169
C K+F R L RH ++H +
Sbjct: 11 CDKAFVRNHDLIRHKKSHQEK 31
Score = 33.5 bits (77), Expect = 0.001
Identities = 9/26 (34%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
PY C C K F ++ +L H H
Sbjct: 3 PYSCDHPGCDKAFVRNHDLIRHKKSH 28
Score = 32.7 bits (75), Expect = 0.003
Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 197 ERPHVC--PICFKTFTASSNLYYHRITHVK 224
+RP+ C P C K F + +L H+ +H +
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 30.4 bits (69), Expect = 0.019
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 225 DKPHKC--GACGKSFPTPGNLRTHSYSHSG 252
D+P+ C C K+F +L H SH
Sbjct: 1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
Score = 24.2 bits (53), Expect = 2.8
Identities = 7/29 (24%), Positives = 12/29 (41%)
Query: 257 KIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
+ ++ C K+F +L H SH
Sbjct: 2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE 30
>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 26
Score = 39.5 bits (93), Expect = 1e-05
Identities = 13/26 (50%), Positives = 17/26 (65%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHS 195
KP+ C C K FS +S L H+RIH+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
Score = 34.9 bits (81), Expect = 4e-04
Identities = 13/24 (54%), Positives = 16/24 (66%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
PYKC C K F+++S L NH IH
Sbjct: 2 PYKCLECGKAFSQNSGLINHQRIH 25
Score = 34.1 bits (79), Expect = 7e-04
Identities = 11/22 (50%), Positives = 13/22 (59%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHT 167
C CGK+F + S L H R HT
Sbjct: 5 CLECGKAFSQNSGLINHQRIHT 26
Score = 30.6 bits (70), Expect = 0.012
Identities = 9/25 (36%), Positives = 14/25 (56%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITH 222
+P+ C C K F+ +S L H+ H
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIH 25
Score = 30.3 bits (69), Expect = 0.020
Identities = 11/26 (42%), Positives = 14/26 (53%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHS 251
KP+KC CGK+F L H H+
Sbjct: 1 KPYKCLECGKAFSQNSGLINHQRIHT 26
>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 39.3 bits (92), Expect = 1e-05
Identities = 14/30 (46%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 170 KPHVCDV--CSKGFSTSSSLNTHRRIHSGE 197
KP C C K FS +L TH RIH+G+
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30
Score = 36.2 bits (84), Expect = 2e-04
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 149 CGKSFDRPSLLKRHTRTHTGE 169
CGK F L+ H R HTG+
Sbjct: 10 CGKRFSLDFNLRTHVRIHTGD 30
Score = 32.0 bits (73), Expect = 0.005
Identities = 11/26 (42%), Positives = 16/26 (61%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
P++CT C K F+ NL+ H+ IH
Sbjct: 2 PFQCTFEGCGKRFSLDFNLRTHVRIH 27
Score = 30.8 bits (70), Expect = 0.011
Identities = 14/29 (48%), Positives = 16/29 (55%), Gaps = 2/29 (6%)
Query: 226 KPHKC--GACGKSFPTPGNLRTHSYSHSG 252
KP +C CGK F NLRTH H+G
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29
Score = 28.1 bits (63), Expect = 0.096
Identities = 9/27 (33%), Positives = 11/27 (40%), Gaps = 2/27 (7%)
Query: 198 RPHVC--PICFKTFTASSNLYYHRITH 222
+P C C K F+ NL H H
Sbjct: 1 KPFQCTFEGCGKRFSLDFNLRTHVRIH 27
Score = 24.6 bits (54), Expect = 1.7
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)
Query: 255 PYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
P++ + CGK F NLRTH H+G
Sbjct: 2 PFQC---TFEGCGKRFSLDFNLRTHVRIHTG 29
>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 29
Score = 38.5 bits (90), Expect = 2e-05
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 2/29 (6%)
Query: 170 KPHVCDV--CSKGFSTSSSLNTHRRIHSG 196
+P+ C V C + FS S+ L H RIH+G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 35.0 bits (81), Expect = 3e-04
Identities = 10/20 (50%), Positives = 12/20 (60%)
Query: 149 CGKSFDRPSLLKRHTRTHTG 168
C + F R + L RH R HTG
Sbjct: 10 CDRRFSRSADLTRHIRIHTG 29
Score = 33.1 bits (76), Expect = 0.002
Identities = 11/26 (42%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
PY C V C + F++S++L H+ IH
Sbjct: 2 PYACPVESCDRRFSRSADLTRHIRIH 27
Score = 30.4 bits (69), Expect = 0.018
Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 226 KPHKC--GACGKSFPTPGNLRTHSYSHSG 252
+P+ C +C + F +L H H+G
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIHTG 29
Score = 29.2 bits (66), Expect = 0.050
Identities = 9/27 (33%), Positives = 14/27 (51%), Gaps = 2/27 (7%)
Query: 198 RPHVC--PICFKTFTASSNLYYHRITH 222
RP+ C C + F+ S++L H H
Sbjct: 1 RPYACPVESCDRRFSRSADLTRHIRIH 27
Score = 24.6 bits (54), Expect = 2.2
Identities = 9/31 (29%), Positives = 12/31 (38%), Gaps = 3/31 (9%)
Query: 255 PYKIHAPSVGACGKSFPTPGNLRTHSYSHSG 285
PY S C + F +L H H+G
Sbjct: 2 PYACPVES---CDRRFSRSADLTRHIRIHTG 29
>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 35.0 bits (81), Expect = 3e-04
Identities = 10/28 (35%), Positives = 18/28 (64%), Gaps = 2/28 (7%)
Query: 170 KPHVCDV--CSKGFSTSSSLNTHRRIHS 195
+P+VC C+K F+ S++L +H H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 32.7 bits (75), Expect = 0.002
Identities = 8/19 (42%), Positives = 10/19 (52%)
Query: 149 CGKSFDRPSLLKRHTRTHT 167
C K F + + LK H TH
Sbjct: 10 CNKKFAQSTNLKSHILTHA 28
Score = 31.9 bits (73), Expect = 0.005
Identities = 13/26 (50%), Positives = 17/26 (65%), Gaps = 2/26 (7%)
Query: 288 PYKCTV--CIKGFAKSSNLKNHMTIH 311
PY C C K FA+S+NLK+H+ H
Sbjct: 2 PYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 30.8 bits (70), Expect = 0.011
Identities = 14/27 (51%), Positives = 17/27 (62%), Gaps = 2/27 (7%)
Query: 198 RPHVCPI--CFKTFTASSNLYYHRITH 222
RP+VCP C K F S+NL H +TH
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTH 27
Score = 28.1 bits (63), Expect = 0.10
Identities = 9/28 (32%), Positives = 15/28 (53%), Gaps = 2/28 (7%)
Query: 226 KPHKC--GACGKSFPTPGNLRTHSYSHS 251
+P+ C C K F NL++H +H+
Sbjct: 1 RPYVCPFDGCNKKFAQSTNLKSHILTHA 28
Score = 23.5 bits (51), Expect = 4.2
Identities = 9/30 (30%), Positives = 13/30 (43%), Gaps = 3/30 (10%)
Query: 255 PYKIHAPSVGACGKSFPTPGNLRTHSYSHS 284
PY C K F NL++H +H+
Sbjct: 2 PYVCPFDG---CNKKFAQSTNLKSHILTHA 28
>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress
(Arabidopsis thaliana) [TaxId: 3702]}
Length = 37
Score = 33.9 bits (78), Expect = 0.001
Identities = 7/29 (24%), Positives = 15/29 (51%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGER 198
+ + C C + F ++ +L H +H +R
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 28.5 bits (64), Expect = 0.080
Identities = 10/28 (35%), Positives = 14/28 (50%), Gaps = 3/28 (10%)
Query: 287 WP---YKCTVCIKGFAKSSNLKNHMTIH 311
WP Y C+ C + F + L HM +H
Sbjct: 1 WPPRSYTCSFCKREFRSAQALGGHMNVH 28
Score = 27.4 bits (61), Expect = 0.21
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDK 226
R + C C + F ++ L H H +D+
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 25.8 bits (57), Expect = 0.78
Identities = 6/25 (24%), Positives = 10/25 (40%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSH 250
+ + C C + F + L H H
Sbjct: 4 RSYTCSFCKREFRSAQALGGHMNVH 28
Score = 23.9 bits (52), Expect = 4.1
Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 1/32 (3%)
Query: 139 PSKTMLPCTVCGKSFDRPSLLKRHTRTHTGEK 170
P ++ C+ C + F L H H ++
Sbjct: 2 PPRS-YTCSFCKREFRSAQALGGHMNVHRRDR 32
Score = 23.1 bits (50), Expect = 7.1
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 254 WPYKIHAPSVGACGKSFPTPGNLRTHSYSH 283
WP + + S C + F + L H H
Sbjct: 1 WPPRSYTCSF--CKREFRSAQALGGHMNVH 28
>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId:
10090]}
Length = 28
Score = 33.6 bits (77), Expect = 0.001
Identities = 11/26 (42%), Positives = 15/26 (57%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIH 194
EKP CD+C + F+ S H +IH
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIH 26
Score = 30.2 bits (68), Expect = 0.022
Identities = 10/21 (47%), Positives = 13/21 (61%)
Query: 146 CTVCGKSFDRPSLLKRHTRTH 166
C +CG+ F R KRHT+ H
Sbjct: 6 CDICGRKFARSDERKRHTKIH 26
Score = 29.8 bits (67), Expect = 0.024
Identities = 10/24 (41%), Positives = 14/24 (58%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
P+ C +C + FA+S K H IH
Sbjct: 3 PFACDICGRKFARSDERKRHTKIH 26
Score = 24.0 bits (52), Expect = 3.3
Identities = 9/28 (32%), Positives = 13/28 (46%)
Query: 197 ERPHVCPICFKTFTASSNLYYHRITHVK 224
E+P C IC + F S H H++
Sbjct: 1 EKPFACDICGRKFARSDERKRHTKIHLR 28
>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 35
Score = 33.5 bits (76), Expect = 0.001
Identities = 13/31 (41%), Positives = 18/31 (58%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHSGERPH 200
K C++C K F LN H+ HSGE+P+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 31.2 bits (70), Expect = 0.010
Identities = 13/27 (48%), Positives = 17/27 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C +CGK F L RH +H+GEKP+
Sbjct: 8 CEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 29.6 bits (66), Expect = 0.039
Identities = 14/31 (45%), Positives = 15/31 (48%)
Query: 226 KPHKCGACGKSFPTPGNLRTHSYSHSGSWPY 256
K C CGK F +L H SHSG PY
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 26.2 bits (57), Expect = 0.54
Identities = 10/31 (32%), Positives = 17/31 (54%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITHVKDKPH 228
+ C IC K F +L H+++H +KP+
Sbjct: 4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY 34
Score = 25.0 bits (54), Expect = 1.5
Identities = 12/24 (50%), Positives = 13/24 (54%)
Query: 266 CGKSFPTPGNLRTHSYSHSGSWPY 289
CGK F +L H SHSG PY
Sbjct: 11 CGKIFRDVYHLNRHKLSHSGEKPY 34
>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 33.1 bits (75), Expect = 0.002
Identities = 14/24 (58%), Positives = 15/24 (62%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE 169
C CGK+F S LKRH HTGE
Sbjct: 5 CAECGKAFVESSKLKRHQLVHTGE 28
Score = 32.3 bits (73), Expect = 0.004
Identities = 13/26 (50%), Positives = 16/26 (61%)
Query: 172 HVCDVCSKGFSTSSSLNTHRRIHSGE 197
HVC C K F SS L H+ +H+GE
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTGE 28
Score = 27.7 bits (61), Expect = 0.14
Identities = 12/25 (48%), Positives = 14/25 (56%)
Query: 198 RPHVCPICFKTFTASSNLYYHRITH 222
R HVC C K F SS L H++ H
Sbjct: 1 RVHVCAECGKAFVESSKLKRHQLVH 25
Score = 26.5 bits (58), Expect = 0.46
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 291 CTVCIKGFAKSSNLKNHMTIH 311
C C K F +SS LK H +H
Sbjct: 5 CAECGKAFVESSKLKRHQLVH 25
Score = 26.1 bits (57), Expect = 0.57
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 228 HKCGACGKSFPTPGNLRTHSYSHSG 252
H C CGK+F L+ H H+G
Sbjct: 3 HVCAECGKAFVESSKLKRHQLVHTG 27
>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 28
Score = 32.5 bits (74), Expect = 0.003
Identities = 12/25 (48%), Positives = 16/25 (64%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C CG +PS+LK+H RTHT +
Sbjct: 4 CEECGIRAKKPSMLKKHIRTHTDVR 28
Score = 25.2 bits (55), Expect = 1.3
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 172 HVCDVCSKGFSTSSSLNTHRRIHSGER 198
++C+ C S L H R H+ R
Sbjct: 2 YICEECGIRAKKPSMLKKHIRTHTDVR 28
>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 26
Score = 31.6 bits (71), Expect = 0.006
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 171 PHVCDVCSKGFSTSSSLNTHRRIHSG 196
PH C+VC K FS L TH R H+G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 31.2 bits (70), Expect = 0.008
Identities = 13/26 (50%), Positives = 15/26 (57%)
Query: 227 PHKCGACGKSFPTPGNLRTHSYSHSG 252
PHKC CGK F L+TH H+G
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCHTG 26
Score = 30.4 bits (68), Expect = 0.015
Identities = 14/23 (60%), Positives = 14/23 (60%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTG 168
C VCGK F R LK H R HTG
Sbjct: 4 CEVCGKCFSRKDKLKTHMRCHTG 26
Score = 27.7 bits (61), Expect = 0.13
Identities = 12/24 (50%), Positives = 15/24 (62%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
P+KC VC K F++ LK HM H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
Score = 23.5 bits (50), Expect = 4.6
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 199 PHVCPICFKTFTASSNLYYHRITH 222
PH C +C K F+ L H H
Sbjct: 1 PHKCEVCGKCFSRKDKLKTHMRCH 24
>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 28
Score = 30.9 bits (69), Expect = 0.012
Identities = 14/26 (53%), Positives = 16/26 (61%)
Query: 170 KPHVCDVCSKGFSTSSSLNTHRRIHS 195
KP+ C C + SSSLN H RIHS
Sbjct: 2 KPYKCKTCDYAAADSSSLNKHLRIHS 27
Score = 26.3 bits (57), Expect = 0.51
Identities = 12/24 (50%), Positives = 14/24 (58%)
Query: 288 PYKCTVCIKGFAKSSNLKNHMTIH 311
PYKC C A SS+L H+ IH
Sbjct: 3 PYKCKTCDYAAADSSSLNKHLRIH 26
>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain
{Desulfovibrio vulgaris [TaxId: 881]}
Length = 36
Score = 30.8 bits (70), Expect = 0.012
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 19/47 (40%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC------FKTF 209
+K H+C +C G+ IH GE CPIC F +
Sbjct: 3 DKFHLCPIC--GY-----------IHKGEDFEKCPICFRPKDTFTAY 36
Score = 25.4 bits (56), Expect = 1.3
Identities = 8/32 (25%), Positives = 10/32 (31%), Gaps = 13/32 (40%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
C +CG H GE C +C
Sbjct: 8 CPICG-------------YIHKGEDFEKCPIC 26
>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 53
Score = 31.5 bits (71), Expect = 0.013
Identities = 10/21 (47%), Positives = 10/21 (47%)
Query: 230 CGACGKSFPTPGNLRTHSYSH 250
CG CGK F LR H H
Sbjct: 9 CGLCGKVFTDANRLRQHEAQH 29
Score = 30.7 bits (69), Expect = 0.023
Identities = 10/24 (41%), Positives = 15/24 (62%)
Query: 143 MLPCTVCGKSFDRPSLLKRHTRTH 166
+LPC +CGK F + L++H H
Sbjct: 6 ILPCGLCGKVFTDANRLRQHEAQH 29
Score = 28.0 bits (62), Expect = 0.24
Identities = 9/22 (40%), Positives = 9/22 (40%)
Query: 262 SVGACGKSFPTPGNLRTHSYSH 283
G CGK F LR H H
Sbjct: 8 PCGLCGKVFTDANRLRQHEAQH 29
>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain
{Archaeon Pyrococcus furiosus [TaxId: 2261]}
Length = 37
Score = 28.9 bits (65), Expect = 0.062
Identities = 9/37 (24%), Positives = 15/37 (40%), Gaps = 13/37 (35%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
+K ++C +C G+ E P CP+C
Sbjct: 3 KKVYICPIC--GY-----------TAVDEAPEYCPVC 26
Score = 25.4 bits (56), Expect = 1.3
Identities = 9/32 (28%), Positives = 10/32 (31%), Gaps = 13/32 (40%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVC 177
C +CG T E P C VC
Sbjct: 8 CPICG-------------YTAVDEAPEYCPVC 26
>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 30
Score = 28.2 bits (62), Expect = 0.11
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 140 SKTMLPCTVCGKSFDRPSLLKRHTRTHTGE 169
S+ + C+VC ++F R L+ H +HTGE
Sbjct: 1 SEQVFTCSVCQETFRRRMELRLHMVSHTGE 30
>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 27
Score = 28.1 bits (62), Expect = 0.12
Identities = 13/25 (52%), Positives = 13/25 (52%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEK 170
C C K F LK H R HTGEK
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
Score = 24.7 bits (53), Expect = 1.7
Identities = 10/25 (40%), Positives = 13/25 (52%)
Query: 174 CDVCSKGFSTSSSLNTHRRIHSGER 198
C C K F + L H R H+GE+
Sbjct: 3 CPTCHKKFLSKYYLKVHNRKHTGEK 27
>d1zbdb_ g.50.1.1 (B:) Effector domain of rabphilin-3a {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 124
Score = 30.1 bits (67), Expect = 0.15
Identities = 17/104 (16%), Positives = 32/104 (30%), Gaps = 15/104 (14%)
Query: 105 LDSLQRYWARPLDLTKSATVGAENEFSRKAKKKSPSKTMLPCTVCGKSFDRPSLLKRHTR 164
+ R A ++ + +G + +K + C +CG+ +L
Sbjct: 12 NRVIAR--AEKMETMEQERIGRLVDRLETMRKNVAGDGVNRCILCGEQL---GMLGS--- 63
Query: 165 THTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPICFKT 208
VC+ C K T + T +C IC +
Sbjct: 64 -----ASVVCEDCKKNVCTKCGVETSNNRPHPVW--LCKICLEQ 100
Score = 25.1 bits (54), Expect = 7.0
Identities = 7/47 (14%), Positives = 15/47 (31%), Gaps = 11/47 (23%)
Query: 191 RRIHSGERPHVCPICFKTFTASSNLYYHRITHVKDKPHKCGACGKSF 237
R+ +G+ + C +C + + C C K+
Sbjct: 40 RKNVAGDGVNRCILCGEQLGM-----------LGSASVVCEDCKKNV 75
>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 29
Score = 27.3 bits (60), Expect = 0.25
Identities = 11/29 (37%), Positives = 15/29 (51%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSGE 197
E+P C +C SS L H R H+G+
Sbjct: 1 ERPFKCQICPYASRNSSQLTVHLRSHTGD 29
>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 29
Score = 26.6 bits (58), Expect = 0.36
Identities = 10/18 (55%), Positives = 11/18 (61%)
Query: 149 CGKSFDRPSLLKRHTRTH 166
C K F PS LKRH + H
Sbjct: 11 CDKRFSLPSRLKRHEKVH 28
>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 33
Score = 26.6 bits (59), Expect = 0.45
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGE 169
C+ + F +L H R HTGE
Sbjct: 10 CSRELRPFKAQYMLVVHMRRHTGE 33
>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger
peptide) {Drosophila melanogaster [TaxId: 7227]}
Length = 26
Score = 26.2 bits (57), Expect = 0.52
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Query: 202 CPICFKTFTASSNLYYH-RITH 222
CP CFK FT N+ H +I H
Sbjct: 4 CPFCFKEFTRKDNMTAHVKIIH 25
Score = 23.5 bits (50), Expect = 5.1
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 289 YKCTVCIKGFAKSSNLKNHMTI 310
Y C C K F + N+ H+ I
Sbjct: 2 YPCPFCFKEFTRKDNMTAHVKI 23
>d1g2ra_ d.192.1.1 (A:) Hypothetical cytosolic protein SP0554
{Streptococcus pneumoniae [TaxId: 1313]}
Length = 94
Score = 27.8 bits (62), Expect = 0.59
Identities = 8/34 (23%), Positives = 14/34 (41%), Gaps = 4/34 (11%)
Query: 136 KKSPSKTMLPCTVCGKSFDRPSLLKRHTRTHTGE 169
+K P + V + D+ LL R + G+
Sbjct: 1 RKIPLRK---SVVSNEVIDKRDLL-RIVKNKEGQ 30
>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo
sapiens) [TaxId: 9606]}
Length = 44
Score = 26.2 bits (57), Expect = 0.69
Identities = 10/25 (40%), Positives = 15/25 (60%)
Query: 167 TGEKPHVCDVCSKGFSTSSSLNTHR 191
TG KP+ C++C+K F S + H
Sbjct: 1 TGIKPYECNICAKRFMWRDSFHRHV 25
>d1joca1 g.50.1.1 (A:1348-1411) Eea1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 64
Score = 26.9 bits (59), Expect = 0.71
Identities = 17/62 (27%), Positives = 19/62 (30%), Gaps = 12/62 (19%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPHVCDVCSKGFSTSSSLNTHRRIHSGERPHVCPIC 205
C CGK F S+ R H C C F S S + VC C
Sbjct: 11 CMACGKGF---SVTVRR---------HHCRQCGNIFCAECSAKNALTPSSKKPVRVCDAC 58
Query: 206 FK 207
F
Sbjct: 59 FN 60
>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 67
Score = 27.0 bits (60), Expect = 0.71
Identities = 10/25 (40%), Positives = 14/25 (56%)
Query: 168 GEKPHVCDVCSKGFSTSSSLNTHRR 192
G H C C++ F S++L TH R
Sbjct: 12 GGGLHRCLACARYFIDSTNLKTHFR 36
Score = 25.8 bits (57), Expect = 1.5
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 4/30 (13%)
Query: 200 HVCPICFKTFTASSNLYYHRITHVKDKPHK 229
H C C + F S+NL TH + K HK
Sbjct: 16 HRCLACARYFIDSTNL----KTHFRSKDHK 41
Score = 25.8 bits (57), Expect = 1.6
Identities = 11/26 (42%), Positives = 14/26 (53%), Gaps = 4/26 (15%)
Query: 225 DKP----HKCGACGKSFPTPGNLRTH 246
D P H+C AC + F NL+TH
Sbjct: 9 DLPGGGLHRCLACARYFIDSTNLKTH 34
Score = 25.0 bits (55), Expect = 2.8
Identities = 9/27 (33%), Positives = 12/27 (44%), Gaps = 4/27 (14%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH 172
C C + F + LK H R+ K H
Sbjct: 18 CLACARYFIDSTNLKTHFRS----KDH 40
Score = 25.0 bits (55), Expect = 2.9
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 289 YKCTVCIKGFAKSSNLKNHM 308
++C C + F S+NLK H
Sbjct: 16 HRCLACARYFIDSTNLKTHF 35
>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human
(Homo sapiens) [TaxId: 9606]}
Length = 37
Score = 25.8 bits (56), Expect = 0.80
Identities = 9/23 (39%), Positives = 13/23 (56%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTG 168
C+ CGK+F R + + RH G
Sbjct: 7 CSKCGKTFTRRNTMARHADNCAG 29
>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2
{Human (Homo sapiens) [TaxId: 9606]}
Length = 38
Score = 26.0 bits (57), Expect = 0.81
Identities = 8/28 (28%), Positives = 13/28 (46%), Gaps = 2/28 (7%)
Query: 169 EKPHVCDV--CSKGFSTSSSLNTHRRIH 194
+KP +C C + F+ L H+ H
Sbjct: 4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH 31
>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse
(Mus musculus) [TaxId: 10090]}
Length = 26
Score = 25.5 bits (55), Expect = 0.84
Identities = 9/21 (42%), Positives = 15/21 (71%)
Query: 288 PYKCTVCIKGFAKSSNLKNHM 308
PYKC+ C + F + +L++HM
Sbjct: 2 PYKCSSCSQQFMQKKDLQSHM 22
>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 32
Score = 25.4 bits (55), Expect = 1.1
Identities = 11/28 (39%), Positives = 14/28 (50%)
Query: 169 EKPHVCDVCSKGFSTSSSLNTHRRIHSG 196
EKP+ C VC F ++ H R H G
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG 28
Score = 25.4 bits (55), Expect = 1.2
Identities = 9/26 (34%), Positives = 14/26 (53%)
Query: 197 ERPHVCPICFKTFTASSNLYYHRITH 222
E+P+ CP+C F + YH +H
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSH 26
Score = 24.2 bits (52), Expect = 2.6
Identities = 10/23 (43%), Positives = 12/23 (52%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTG 168
C VCG F R + H R+H G
Sbjct: 6 CPVCGLRFKRKDRMSYHVRSHDG 28
Score = 23.5 bits (50), Expect = 5.4
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 225 DKPHKCGACGKSFPTPGNLRTHSYSHSGS 253
+KP+ C CG F + H SH GS
Sbjct: 1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS 29
>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on
Saccharomyces cerevisiae sequence}
Length = 31
Score = 24.8 bits (54), Expect = 1.7
Identities = 9/18 (50%), Positives = 12/18 (66%)
Query: 145 PCTVCGKSFDRPSLLKRH 162
PC +C ++F R LL RH
Sbjct: 3 PCGLCNRAFTRRDLLIRH 20
>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId:
8355]}
Length = 26
Score = 24.7 bits (53), Expect = 2.0
Identities = 8/21 (38%), Positives = 14/21 (66%)
Query: 174 CDVCSKGFSTSSSLNTHRRIH 194
C +C + F S+L+ H+R+H
Sbjct: 3 CGLCERSFVEKSALSRHQRVH 23
Score = 24.3 bits (52), Expect = 2.4
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 146 CTVCGKSFDRPSLLKRHTRTH 166
C +C +SF S L RH R H
Sbjct: 3 CGLCERSFVEKSALSRHQRVH 23
>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 29
Score = 24.4 bits (53), Expect = 2.1
Identities = 8/20 (40%), Positives = 12/20 (60%)
Query: 149 CGKSFDRPSLLKRHTRTHTG 168
C K + PS L++H +T G
Sbjct: 10 CTKRYTDPSSLRKHVKTVHG 29
Score = 24.4 bits (53), Expect = 2.6
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 226 KPHKC--GACGKSFPTPGNLRTHSYSHSG 252
KP+ C C K + P +LR H + G
Sbjct: 1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 29
>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId:
7227]}
Length = 54
Score = 25.1 bits (54), Expect = 2.7
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 197 ERPHVCPICFKTFTASSNLYYH 218
E+P CPIC+ S NL H
Sbjct: 22 EQPATCPICYAVIRQSRNLRRH 43
>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA
{Xenopus laevis [TaxId: 8355]}
Length = 30
Score = 23.9 bits (51), Expect = 3.5
Identities = 13/28 (46%), Positives = 14/28 (50%), Gaps = 2/28 (7%)
Query: 144 LPCTV--CGKSFDRPSLLKRHTRTHTGE 169
PC C K F L RH+ THTGE
Sbjct: 3 FPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
Score = 23.9 bits (51), Expect = 3.6
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 170 KPHVC--DVCSKGFSTSSSLNTHRRIHSGE 197
KP C + C KGF++ L H H+GE
Sbjct: 1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 30
>d1zq1a2 c.88.1.1 (A:76-438) Glutamyl-tRNA(Gln) amidotransferase
subunit D, GatD {Pyrococcus abyssi [TaxId: 29292]}
Length = 363
Score = 27.0 bits (59), Expect = 3.6
Identities = 14/66 (21%), Positives = 25/66 (37%), Gaps = 3/66 (4%)
Query: 53 STNTDIIHWIEVLSYLRKGLPSSSTNTDIIHWIEVLSYLRVFL---VQEANVVISLDSLQ 109
S + HW+++ + K L S + H + + Y L ++ + L Q
Sbjct: 71 SEDMKPKHWVKIAHEVAKALNSGDYGVVVAHGTDTMGYTAAALSFMLRNLGKPVVLVGAQ 130
Query: 110 RYWARP 115
R RP
Sbjct: 131 RSSDRP 136
>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}
Length = 30
Score = 23.6 bits (50), Expect = 4.3
Identities = 10/21 (47%), Positives = 12/21 (57%)
Query: 288 PYKCTVCIKGFAKSSNLKNHM 308
Y+C C A SSNLK H+
Sbjct: 2 TYQCQYCEFRSADSSNLKTHI 22
>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo
sapiens) [TaxId: 9606]}
Length = 29
Score = 22.6 bits (48), Expect = 9.6
Identities = 11/25 (44%), Positives = 13/25 (52%)
Query: 227 PHKCGACGKSFPTPGNLRTHSYSHS 251
P+ C C SF T GNL H S +
Sbjct: 1 PYHCTYCNFSFKTKGNLTKHMKSKA 25
>d1wfka_ g.50.1.1 (A:) Zinc finger FYVE domain containing protein 19
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 88
Score = 24.3 bits (52), Expect = 9.7
Identities = 12/47 (25%), Positives = 16/47 (34%), Gaps = 1/47 (2%)
Query: 146 CTVCGKSFDRPSLLKRHTRTHTGEKPH-VCDVCSKGFSTSSSLNTHR 191
C CG++F L G VC C + SS N +
Sbjct: 28 CKNCGRAFCNGCLSFSALVPRAGNTQQKVCKQCHTILTRGSSDNASK 74
>d1vqo31 g.41.8.3 (3:1-92) Ribosomal protein L44e {Archaeon
Haloarcula marismortui [TaxId: 2238]}
Length = 92
Score = 24.3 bits (53), Expect = 9.9
Identities = 11/38 (28%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 130 FSRKAKKKSPSKT---MLPCTVCGKSFDRPSLLKRHTR 164
FS+ P+K C CGK+ R R R
Sbjct: 52 FSKVPGGDKPTKKTDLKYRCGECGKAHLRE--GWRAGR 87
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.318 0.132 0.417
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,149,709
Number of extensions: 52584
Number of successful extensions: 440
Number of sequences better than 10.0: 1
Number of HSP's gapped: 424
Number of HSP's successfully gapped: 232
Length of query: 311
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 226
Effective length of database: 1,240,546
Effective search space: 280363396
Effective search space used: 280363396
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 53 (24.4 bits)