BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy719
(45 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P16905|KAPR1_DROME cAMP-dependent protein kinase type I regulatory subunit
OS=Drosophila melanogaster GN=Pka-R1 PE=2 SV=2
Length = 376
Score = 44.3 bits (103), Expect = 2e-04, Method: Composition-based stats.
Identities = 24/45 (53%), Positives = 28/45 (62%)
Query: 1 MGSTIRKRKLYEEFLSRVSILVQCGSKKMGIVAKHVTCAMVEKGE 45
MGSTIRKRK+YEEFLSRVSIL + VA + + GE
Sbjct: 231 MGSTIRKRKMYEEFLSRVSILESLDKWERLTVADSLETCSFDDGE 275
>sp|P31321|KAP1_HUMAN cAMP-dependent protein kinase type I-beta regulatory subunit
OS=Homo sapiens GN=PRKAR1B PE=1 SV=4
Length = 381
Score = 42.4 bits (98), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 1 MGSTIRKRKLYEEFLSRVSILVQCGSKKMGIVAKHVTCAMVEKGE 45
MGST+RKRK+YEEFLS+VSIL + VA + E GE
Sbjct: 236 MGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGE 280
>sp|P81377|KAP1_RAT cAMP-dependent protein kinase type I-beta regulatory subunit
OS=Rattus norvegicus GN=Prkar1b PE=2 SV=2
Length = 381
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 1 MGSTIRKRKLYEEFLSRVSILVQCGSKKMGIVAKHVTCAMVEKGE 45
MGST+RKRK+YEEFLS+VSIL + VA + E GE
Sbjct: 236 MGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGE 280
>sp|P12849|KAP1_MOUSE cAMP-dependent protein kinase type I-beta regulatory subunit OS=Mus
musculus GN=Prkar1b PE=2 SV=2
Length = 381
Score = 42.4 bits (98), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/45 (51%), Positives = 28/45 (62%)
Query: 1 MGSTIRKRKLYEEFLSRVSILVQCGSKKMGIVAKHVTCAMVEKGE 45
MGST+RKRK+YEEFLS+VSIL + VA + E GE
Sbjct: 236 MGSTLRKRKMYEEFLSKVSILESLEKWERLTVADALEPVQFEDGE 280
>sp|Q5ZM91|KAP0_CHICK cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Gallus gallus GN=PRKAR1A PE=2 SV=1
Length = 382
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 237 MGSTLRKRKMYEEFLSKVSIL 257
>sp|P07802|KAP0_PIG cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Sus scrofa GN=PRKAR1A PE=1 SV=2
Length = 380
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 235 MGSTLRKRKMYEEFLSKVSIL 255
>sp|P00514|KAP0_BOVIN cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Bos taurus GN=PRKAR1A PE=1 SV=2
Length = 380
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 235 MGSTLRKRKMYEEFLSKVSIL 255
>sp|Q5REL1|KAP0_PONAB cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Pongo abelii GN=PRKAR1A PE=2 SV=2
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 236 MGSTLRKRKMYEEFLSKVSIL 256
>sp|P10644|KAP0_HUMAN cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Homo sapiens GN=PRKAR1A PE=1 SV=1
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 236 MGSTLRKRKMYEEFLSKVSIL 256
>sp|P09456|KAP0_RAT cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Rattus norvegicus GN=Prkar1a PE=2 SV=2
Length = 381
Score = 41.6 bits (96), Expect = 0.001, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 236 MGSTLRKRKMYEEFLSKVSIL 256
>sp|Q9DBC7|KAP0_MOUSE cAMP-dependent protein kinase type I-alpha regulatory subunit
OS=Mus musculus GN=Prkar1a PE=1 SV=3
Length = 381
Score = 41.6 bits (96), Expect = 0.002, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+RKRK+YEEFLS+VSIL
Sbjct: 236 MGSTLRKRKMYEEFLSKVSIL 256
>sp|P31319|KAPR_APLCA cAMP-dependent protein kinase regulatory subunit OS=Aplysia
californica PE=2 SV=2
Length = 378
Score = 41.2 bits (95), Expect = 0.002, Method: Composition-based stats.
Identities = 18/21 (85%), Positives = 21/21 (100%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGSTIRKRK+YE+FLS+VSIL
Sbjct: 233 MGSTIRKRKIYEDFLSKVSIL 253
>sp|P05987|KAPR_DICDI cAMP-dependent protein kinase regulatory subunit OS=Dictyostelium
discoideum GN=pkaR PE=1 SV=1
Length = 327
Score = 37.0 bits (84), Expect = 0.038, Method: Composition-based stats.
Identities = 16/21 (76%), Positives = 18/21 (85%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
M TI+KRKLYEEFL +VSIL
Sbjct: 170 MDQTIKKRKLYEEFLEKVSIL 190
>sp|P30625|KAPR_CAEEL cAMP-dependent protein kinase regulatory subunit OS=Caenorhabditis
elegans GN=kin-2 PE=2 SV=3
Length = 366
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 14/21 (66%), Positives = 18/21 (85%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGS +KRK+Y+EFLS+V IL
Sbjct: 221 MGSVTKKRKMYDEFLSKVQIL 241
>sp|P86244|KAP0_MESAU cAMP-dependent protein kinase type I-alpha regulatory subunit
(Fragments) OS=Mesocricetus auratus GN=PRKAR1A PE=1
SV=1
Length = 167
Score = 31.2 bits (69), Expect = 2.1, Method: Composition-based stats.
Identities = 15/21 (71%), Positives = 18/21 (85%), Gaps = 3/21 (14%)
Query: 1 MGSTIRKRKLYEEFLSRVSIL 21
MGST+R +YEEFLS+VSIL
Sbjct: 63 MGSTLR---MYEEFLSKVSIL 80
>sp|Q8TF77|KAPR_MUCCL cAMP-dependent protein kinase regulatory subunit OS=Mucor
circinelloides f. lusitanicus GN=pkar PE=3 SV=1
Length = 427
Score = 30.0 bits (66), Expect = 3.8, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 24/45 (53%)
Query: 1 MGSTIRKRKLYEEFLSRVSILVQCGSKKMGIVAKHVTCAMVEKGE 45
M +T RKR++YE FLS V +L S + +A + E G+
Sbjct: 284 MENTSRKRRMYEYFLSEVVLLKSLESYEQHKIADALESVYFEDGQ 328
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.133 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,708,411
Number of Sequences: 539616
Number of extensions: 278828
Number of successful extensions: 528
Number of sequences better than 100.0: 16
Number of HSP's better than 100.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 1
Number of HSP's that attempted gapping in prelim test: 513
Number of HSP's gapped (non-prelim): 16
length of query: 45
length of database: 191,569,459
effective HSP length: 19
effective length of query: 26
effective length of database: 181,316,755
effective search space: 4714235630
effective search space used: 4714235630
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 55 (25.8 bits)