Query psy7193
Match_columns 136
No_of_seqs 101 out of 485
Neff 6.8
Searched_HMMs 13730
Date Fri Aug 16 20:33:35 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7193.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7193hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1r7ja_ a.4.5.49 (A:) Sso10a ( 65.7 6.9 0.0005 23.8 5.2 33 26-63 57-89 (90)
2 d2etda1 a.29.9.1 (A:35-183) Hy 56.5 22 0.0016 22.9 7.0 57 17-73 1-57 (149)
3 d1es6a2 b.31.1.1 (A:201-321) E 29.8 4.9 0.00036 25.2 -0.1 15 100-114 55-69 (121)
4 d2fupa1 a.47.5.1 (A:1-130) Hyp 27.6 62 0.0045 19.7 5.4 44 12-57 5-48 (130)
5 d1ez3a_ a.47.2.1 (A:) Syntaxin 23.2 52 0.0038 20.0 4.1 25 40-64 97-121 (124)
6 d1fxkc_ a.2.5.1 (C:) Prefoldin 14.1 1.3E+02 0.0096 18.1 7.6 35 31-65 90-124 (133)
7 d2f23a1 a.2.1.1 (A:3-77) GreA 13.2 1.2E+02 0.0088 17.1 4.5 27 28-54 7-33 (75)
8 d1xoub_ a.231.1.2 (B:) EspA ch 12.7 1.3E+02 0.0092 17.1 7.3 39 28-66 6-44 (84)
9 d1iqva_ a.75.1.1 (A:) Ribosoma 11.1 1.1E+02 0.0078 20.8 3.5 44 67-110 91-134 (201)
10 d1v9va1 a.29.10.1 (A:8-108) Mi 10.8 1.5E+02 0.011 18.0 3.7 37 28-69 40-76 (101)
No 1
>d1r7ja_ a.4.5.49 (A:) Sso10a (SSO10449) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=65.68 E-value=6.9 Score=23.77 Aligned_cols=33 Identities=15% Similarity=0.327 Sum_probs=26.1
Q ss_pred HHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7193 26 SAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIM 63 (136)
Q Consensus 26 ~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~ 63 (136)
+..+|+++|++ ..+|.++.++..+++.++.+.+
T Consensus 57 iT~kG~~~L~~-----~~~~~~~~~~l~~l~~~i~~~l 89 (90)
T d1r7ja_ 57 LTKKGEELLED-----IRKFNEMRKNMDQLKEKINSVL 89 (90)
T ss_dssp ECHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHH
T ss_pred ECccHHHHHHH-----HHHHHHHHHHHHHHHHHHHHHh
Confidence 34688888886 6788888888888888887754
No 2
>d2etda1 a.29.9.1 (A:35-183) Hypothetical protein TM0961 {Thermotoga maritima [TaxId: 2336]}
Probab=56.50 E-value=22 Score=22.93 Aligned_cols=57 Identities=9% Similarity=-0.055 Sum_probs=48.1
Q ss_pred HHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHc
Q psy7193 17 QSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIALSRA 73 (136)
Q Consensus 17 L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~l~~A 73 (136)
|++++.++.-|--+-+..-+||-.|+-.+.++++.+.....++-+.+.++-....-|
T Consensus 1 Lv~l~~~v~~a~s~Idv~L~rR~dli~nLv~~vk~y~~~Ek~~l~~v~~~R~~~~~a 57 (149)
T d2etda1 1 LVSLEQEVQEKYSQIQNQLQRRADLIPNLVETVKGYAAHEKEILEEIANARAKLIGA 57 (149)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHHHHC
T ss_pred CccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhccc
Confidence 678999999999999999999999999999999988888777777777765554443
No 3
>d1es6a2 b.31.1.1 (A:201-321) EV matrix protein {Ebola virus [TaxId: 205488]}
Probab=29.77 E-value=4.9 Score=25.24 Aligned_cols=15 Identities=27% Similarity=0.308 Sum_probs=12.5
Q ss_pred eeEEeeEEeceEEee
Q psy7193 100 RENIGGVFLTEYEAV 114 (136)
Q Consensus 100 ~~nvmGV~vP~~~~~ 114 (136)
.+||||++||++-..
T Consensus 55 tkni~gievpellv~ 69 (121)
T d1es6a2 55 TKNIMGIEVPETLVL 69 (121)
T ss_dssp GGTEEEEECCHHHHH
T ss_pred ccceeeeccHHHHHH
Confidence 579999999987654
No 4
>d2fupa1 a.47.5.1 (A:1-130) Hypothetical protein PA3352 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=27.62 E-value=62 Score=19.65 Aligned_cols=44 Identities=14% Similarity=0.131 Sum_probs=30.1
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhHHHhHHHHHHHHHHHHHHHHHHHH
Q psy7193 12 PSRGNQSAIEARLVSAKRGHGLLKRKADALQFRFRSIHCKIVETRY 57 (136)
Q Consensus 12 PTR~~L~~lK~rl~~A~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~ 57 (136)
||-.+ -++..+..++.=..||++++++|+..=.+-+..+...+.
T Consensus 5 ~~L~~--~L~~e~~~~~~L~~LL~~e~~aL~~~d~~~Le~l~~~k~ 48 (130)
T d2fupa1 5 PTLLD--LFAEDIGHANQLLQLVDEEFQALERRELPVLQQLLGAKQ 48 (130)
T ss_dssp SHHHH--HHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred HHHHH--HHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHH
Confidence 44454 467899999999999999999998643333333333333
No 5
>d1ez3a_ a.47.2.1 (A:) Syntaxin 1A N-terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=23.21 E-value=52 Score=20.00 Aligned_cols=25 Identities=12% Similarity=0.123 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7193 40 ALQFRFRSIHCKIVETRYLMADIMR 64 (136)
Q Consensus 40 aLi~~f~~l~~~~~~~~~~~~~~~~ 64 (136)
+|...|.+++.++.+.+....+.++
T Consensus 97 ~L~~kf~e~m~~yq~~q~~yr~~~k 121 (124)
T d1ez3a_ 97 TLSRKFVEVMSEYNATQSDYRERCK 121 (124)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 7777888888887777766666554
No 6
>d1fxkc_ a.2.5.1 (C:) Prefoldin alpha subunit {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}
Probab=14.07 E-value=1.3e+02 Score=18.06 Aligned_cols=35 Identities=9% Similarity=0.158 Sum_probs=17.7
Q ss_pred HHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7193 31 HGLLKRKADALQFRFRSIHCKIVETRYLMADIMRE 65 (136)
Q Consensus 31 ~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~ 65 (136)
.+.|++|.+.|-.....+.+++...+..+.+....
T Consensus 90 ~~~l~~ri~~l~~~~~~l~~~~~~~~~~i~~l~~~ 124 (133)
T d1fxkc_ 90 MESIKSQKNELESTLQKMGENLRAITDIMMKLSPQ 124 (133)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 44555555555555555555555555544444433
No 7
>d2f23a1 a.2.1.1 (A:3-77) GreA transcript cleavage protein, N-terminal domain {Thermus thermophilus [TaxId: 274]}
Probab=13.16 E-value=1.2e+02 Score=17.15 Aligned_cols=27 Identities=19% Similarity=0.158 Sum_probs=14.3
Q ss_pred HHHHHhHHHhHHHHHHHHHHHHHHHHH
Q psy7193 28 KRGHGLLKRKADALQFRFRSIHCKIVE 54 (136)
Q Consensus 28 ~rG~~LLk~KrdaLi~~f~~l~~~~~~ 54 (136)
+.||+-|++..+-|..+.-++.+.+.+
T Consensus 7 ~eg~~kL~~EL~~l~~~r~ei~~~I~e 33 (75)
T d2f23a1 7 KAGYERLMQQLERERERLQEATKILQE 33 (75)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhhHHHHHHHHHH
Confidence 456666666666554444444444333
No 8
>d1xoub_ a.231.1.2 (B:) EspA chaperone CesA {Escherichia coli [TaxId: 562]}
Probab=12.68 E-value=1.3e+02 Score=17.13 Aligned_cols=39 Identities=15% Similarity=0.181 Sum_probs=30.9
Q ss_pred HHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7193 28 KRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREA 66 (136)
Q Consensus 28 ~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A 66 (136)
.+-..||++|-..=+--+..++.++.-.++.++..-++|
T Consensus 6 tknkelldkkirseie~ikkiiaefdvvkenvn~lseka 44 (84)
T d1xoub_ 6 TRNKELLDKKIRSEIEAIKKIIAEFDVVKESVNELSEKA 44 (84)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 456789999988888778888888887888777777666
No 9
>d1iqva_ a.75.1.1 (A:) Ribosomal protein S7 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=11.06 E-value=1.1e+02 Score=20.81 Aligned_cols=44 Identities=18% Similarity=0.079 Sum_probs=25.7
Q ss_pred HHHHHHcchhcChhHHHHHHhcccccceeEEEEeeEEeeEEece
Q psy7193 67 AIALSRAKFETNAVFNQIVIQNIGKAQMKLRLTRENIGGVFLTE 110 (136)
Q Consensus 67 ~~~l~~A~~~~G~~~~~~~~~~v~~~~~~v~~~~~nvmGV~vP~ 110 (136)
|.++.......+.+-.+.+..++....+.++++...+-|+.+|+
T Consensus 91 ~~A~~iI~~kt~~nPl~Vl~~AI~N~~P~~Ev~~~r~GG~~yqv 134 (201)
T d1iqva_ 91 KEAFKIIEKRTGKNPIQVLVWAIENAAPREDTTSVMFGGIRYHV 134 (201)
T ss_dssp HHHHHHHHHHHSSCHHHHHHHHHHHHSCSCEEEEEEETTEEEEE
T ss_pred HHHHHHHHHhhCCChHHHHHHHHHhhcceEEEEEEecCCccccc
Confidence 33344443333434233333334555667888999999998887
No 10
>d1v9va1 a.29.10.1 (A:8-108) Microtubule-associated serine/threonine-protein kinase 3, MAST3 (KIAA0561) {Human (Homo sapiens) [TaxId: 9606]}
Probab=10.83 E-value=1.5e+02 Score=17.97 Aligned_cols=37 Identities=11% Similarity=0.148 Sum_probs=23.4
Q ss_pred HHHHHhHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q psy7193 28 KRGHGLLKRKADALQFRFRSIHCKIVETRYLMADIMREAAIA 69 (136)
Q Consensus 28 ~rG~~LLk~KrdaLi~~f~~l~~~~~~~~~~~~~~~~~A~~~ 69 (136)
+-.++-|++-++.||---. +.++.+.++..+.+|+.-
T Consensus 40 ElARDCL~KS~e~lITs~Y-----F~Else~LekLl~ea~er 76 (101)
T d1v9va1 40 ELARDCLAKSGENLVTSRY-----FLEMQEKLERLLQDAHER 76 (101)
T ss_dssp HHHHHHHHHHHHTCCCHHH-----HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHhhhhcChhHHH-----HHHHHHHHHHHHHHHHhc
Confidence 4445667777777664322 456677777777777654
Done!