BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7197
(488 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|4AQ5|A Chain A, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ5|D Chain D, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|A Chain A, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
pdb|4AQ9|D Chain D, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 461
Score = 272 bits (696), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 164/458 (35%), Positives = 230/458 (50%), Gaps = 103/458 (22%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W D +L W+P +YGG++ + +PSD +W PD+VLYNNADG+F + TK L+YTG++
Sbjct: 82 QQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADGDFAIVHMTKLLLDYTGKIM 141
Query: 70 WKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLT 129
W PPAI+KS CEI V +FPFD+Q C MK G WTYDG +V + + DL+
Sbjct: 142 WTPPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGTKVSISPESDRP---------DLS 192
Query: 130 AFYTSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNLIIPCMGISFL 188
F S EW + + ++ +YTCC D PYLDIT++ M+R L++ VN+IIPC+ SFL
Sbjct: 193 TFMESGEWVMKDYRGWKHWVYYTCCPDTPYLDITYHFIMQRIPLYFVVNVIIPCLLFSFL 252
Query: 189 TILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXXXX 248
T+LVFYLP+DSGEK
Sbjct: 253 TVLVFYLPTDSGEK----------------------------MTLSISVLLSLTVFLLVI 284
Query: 249 AEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLL 308
E+IP TS VPL+GK++LFTMI SI VTVVV+N H RSP TH M WV+K+FI+ +
Sbjct: 285 VELIPSTSSAVPLIGKYMLFTMIFVISSIIVTVVVINTHHRSPSTHTMPQWVRKIFINTI 344
Query: 309 PKLL---VMRRPQYDRNKRDM--------DPSQHQSTCKV-HGTPTRPPGXXXXXXXXXX 356
P ++ M+R ++ + + D S Q T +V TP
Sbjct: 345 PNVMFFSTMKRASKEKQENKIFADDIDISDISGKQVTGEVIFQTP--------------- 389
Query: 357 XXXXXXXXXXXXXXMKKVSHHWHLCPELHKAIAGVRFIADHTKTAVNDTKVKPLEVERSL 416
+K P++ AI GV++IA+H K+ E +
Sbjct: 390 -------------LIKN--------PDVKSAIEGVKYIAEHMKSD---------EESSNA 419
Query: 417 CHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGI 454
W Y AMV+D + L +F L +IG+ +
Sbjct: 420 AEEWKY--------VAMVIDHILLCVFMLICIIGTVSV 449
>pdb|2BG9|A Chain A, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution.
pdb|2BG9|D Chain D, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 370
Score = 245 bits (626), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 129/299 (43%), Positives = 171/299 (57%), Gaps = 38/299 (12%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W D +L W+P +YGG++ + +PSD +W PD+VLYNNADG+F + TK L+YTG++
Sbjct: 58 QQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADGDFAIVHMTKLLLDYTGKIM 117
Query: 70 WKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLT 129
W PPAI+KS CEI V +FPFD+Q C MK G WTYDG +V + + DL+
Sbjct: 118 WTPPAIFKSYCEIIVTHFPFDQQNCTMKLGIWTYDGTKVSISPESDRP---------DLS 168
Query: 130 AFYTSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRRKTLFYTVNLIIPCMGISFL 188
F S EW + + ++ +YTCC D PYLDIT++ M+R L++ VN+IIPC+ SFL
Sbjct: 169 TFMESGEWVMKDYRGWKHWVYYTCCPDTPYLDITYHFIMQRIPLYFVVNVIIPCLLFSFL 228
Query: 189 TILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXXXX 248
T+LVFYLP+DSGEK
Sbjct: 229 TVLVFYLPTDSGEK----------------------------MTLSISVLLSLTVFLLVI 260
Query: 249 AEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHL 307
E+IP TS VPL+GK++LFTMI SI VTVVV+N H RSP TH VK + H+
Sbjct: 261 VELIPSTSSAVPLIGKYMLFTMIFVISSIIVTVVVINTHHRSPSTHSAIEGVKYIAEHM 319
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/76 (30%), Positives = 34/76 (44%), Gaps = 17/76 (22%)
Query: 379 HLCPELHKAIAGVRFIADHTKTAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRL 438
H P H AI GV++IA+H K+ E + W Y AMV+D +
Sbjct: 300 HRSPSTHSAIEGVKYIAEHMKSD---------EESSNAAEEWKY--------VAMVIDHI 342
Query: 439 FLWIFTLAVLIGSAGI 454
L +F L +IG+ +
Sbjct: 343 LLCVFMLICIIGTVSV 358
>pdb|4AQ5|B Chain B, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|B Chain B, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 493
Score = 244 bits (622), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 155/450 (34%), Positives = 222/450 (49%), Gaps = 52/450 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W DY+L WDP Y G++ L +PSD +W+PDIVL NN DG+FE+TL + +TG V W
Sbjct: 83 AWTDYRLQWDPAAYEGIKDLSIPSDDVWQPDIVLMNNNDGSFEITLHVNVLVQHTGAVSW 142
Query: 71 KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRH-LDEEKGTNVVDIGVDLT 129
P AIY+SSC I V YFPFD Q C M F S+TYD +V L+H LD + V +I ++
Sbjct: 143 HPSAIYRSSCTIKVMYFPFDWQNCTMVFKSYTYDTSEVILQHALDAKGEREVKEIMINQD 202
Query: 130 AFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLT 189
AF + +W I P+ +N + D Y D+TF + ++RK LFY V I+PC+ IS L
Sbjct: 203 AFTENGQWSIEHKPSRKN---WRSDDPSYEDVTFYLIIQRKPLFYIVYTIVPCILISILA 259
Query: 190 ILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXXXXA 249
ILVFYLP D+GEK A
Sbjct: 260 ILVFYLPPDAGEK----------------------------MSLSISALLALTVFLLLLA 291
Query: 250 EIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLP 309
+ +P TSL VP++ +++F MIL FS+ ++VVVLN+H RSP TH M W++++FI LP
Sbjct: 292 DKVPETSLSVPIIISYLMFIMILVAFSVILSVVVLNLHHRSPNTHTMPNWIRQIFIETLP 351
Query: 310 KLLVMRRPQYDRNKRDMDPSQHQSTCKVHGTPTRPPGXXXXXXXXXXXXXXXXXXXXXXX 369
L ++RP + D P+ + +P G
Sbjct: 352 PFLWIQRPVTTPSP-DSKPTIISRANDEYFI-RKPAGDFVCPVDNARVAVQPERLFSEMK 409
Query: 370 -XMKKVSHHWHLCPELHKAIAGVRFIADHTKTAVNDTKVKPLEVERSLCHGWDYNSPLII 428
+ ++ L +L +A+ +++IA+ ++A +K W Y
Sbjct: 410 WHLNGLTQPVTLPQDLKEAVEAIKYIAEQLESASEFDDLK---------KDWQY------ 454
Query: 429 PSPAMVLDRLFLWIFTLAVLIGSAGIILQA 458
AMV DRLFL+IF IG+ I L A
Sbjct: 455 --VAMVADRLFLYIFITMCSIGTFSIFLDA 482
>pdb|2BG9|B Chain B, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 370
Score = 209 bits (532), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 115/284 (40%), Positives = 156/284 (54%), Gaps = 39/284 (13%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W DY+L WDP Y G++ L +PSD +W+PDIVL NN DG+FE+TL + +TG V W
Sbjct: 59 AWTDYRLQWDPAAYEGIKDLSIPSDDVWQPDIVLMNNNDGSFEITLHVNVLVQHTGAVSW 118
Query: 71 KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTA 130
P AIY+SSC I V YFPFD Q C M F S+TYD +V L+H +D ++ A
Sbjct: 119 HPSAIYRSSCTIKVMYFPFDWQNCTMVFKSYTYDTSEVILQH--------ALDAMINQDA 170
Query: 131 FYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTI 190
F + +W I P+ +N + D Y D+TF + ++RK LFY V I+PC+ IS L I
Sbjct: 171 FTENGQWSIEHKPSRKN---WRSDDPSYEDVTFYLIIQRKPLFYIVYTIVPCILISILAI 227
Query: 191 LVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXXXXAE 250
LVFYLP D+GEK A+
Sbjct: 228 LVFYLPPDAGEK----------------------------MSLSISALLALTVFLLLLAD 259
Query: 251 IIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTH 294
+P TSL VP++ +++F MIL FS+ ++VVVLN+H RSP TH
Sbjct: 260 KVPETSLSVPIIISYLMFIMILVAFSVILSVVVLNLHHRSPNTH 303
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 36/80 (45%), Gaps = 17/80 (21%)
Query: 379 HLCPELHKAIAGVRFIADHTKTAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRL 438
H P H+A+ +++IA+ ++A +K W Y AMV DRL
Sbjct: 297 HRSPNTHEAVEAIKYIAEQLESASEFDDLK---------KDWQY--------VAMVADRL 339
Query: 439 FLWIFTLAVLIGSAGIILQA 458
FL+IF IG+ I L A
Sbjct: 340 FLYIFITMCSIGTFSIFLDA 359
>pdb|4AQ5|C Chain C, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|C Chain C, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 522
Score = 203 bits (516), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 167/313 (53%), Gaps = 36/313 (11%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
+WYD++LTW+ EY + +L + + IW PDIVL NN DG + V + G V
Sbjct: 81 HAWYDHRLTWNASEYSDISILRLRPELIWIPDIVLQNNNDGQYNVAYFCNVLVRPNGYVT 140
Query: 70 WKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEE---KGTNVVDIGV 126
W PPAI++SSC I+V YFPFD Q C +KF + Y+ ++ + + + K + I +
Sbjct: 141 WLPPAIFRSSCPINVLYFPFDWQNCSLKFTALNYNANEISMDLMTDTIDGKDYPIEWIII 200
Query: 127 DLTAFYTSVEWDILEVPAVRN---EKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCM 183
D AF + EW+I+ PA +N +KF + Y D+TF + +RRK LFY +N I PC+
Sbjct: 201 DPEAFTENGEWEIIHKPAKKNIYGDKFPNGTN--YQDVTFYLIIRRKPLFYVINFITPCV 258
Query: 184 GISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXX 243
ISFL L FYLP++SGEK
Sbjct: 259 LISFLAALAFYLPAESGEK----------------------------MSTAICVLLAQAV 290
Query: 244 XXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKV 303
++ +P T+L VPL+GK+++F M L T + +VLN HFR+P THV+S VK++
Sbjct: 291 FLLLTSQRLPETALAVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHVLSTRVKQI 350
Query: 304 FIHLLPKLLVMRR 316
F+ LP++L M R
Sbjct: 351 FLEKLPRILHMSR 363
>pdb|4AQ5|E Chain E, Gating Movement In Acetylcholine Receptor Analysed By
Time- Resolved Electron Cryo-Microscopy (Closed Class)
pdb|4AQ9|E Chain E, Gating Movement In Acetylcholine Receptor Analysed By
Time-Resolved Electron Cryo-Microscopy (Open Class)
Length = 488
Score = 195 bits (495), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 111/324 (34%), Positives = 169/324 (52%), Gaps = 29/324 (8%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
W DY+L+W+ EY G++++ +PS+ +W PD+VL NN DG FEV + G + W
Sbjct: 58 QWNDYRLSWNTSEYEGIDLVRIPSELLWLPDVVLENNVDGQFEVAYYANVLVYNDGSMYW 117
Query: 71 KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTA 130
PPAIY+S+C I V YFPFD Q C + F S TY+ +V+L+ L E+G V I +D
Sbjct: 118 LPPAIYRSTCPIAVTYFPFDWQNCSLVFRSQTYNAHEVNLQ-LSAEEGEVVEWIHIDPED 176
Query: 131 FYTSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNLIIPCMGISFLT 189
F + EW I PA +N + D+ + +I F + ++RK LFY +N+I PC+ IS L
Sbjct: 177 FTENGEWTIRHRPAKKNYNWQLTKDDIDFQEIIFFLIIQRKPLFYIINIIAPCVLISSLV 236
Query: 190 ILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXXXXA 249
+LV++LP+ +G + A+ I A
Sbjct: 237 VLVYFLPAQAGGQ--------KCTLSISVLLAQTI-------------------FLFLIA 269
Query: 250 EIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLP 309
+ +P TSL VPL+GK+++F M + + V+VLN+ R+P TH +S +K +F+ LP
Sbjct: 270 QKVPETSLNVPLIGKYLIFVMFVSLVIVTNCVIVLNVSLRTPNTHSLSEKIKHLFLEFLP 329
Query: 310 KLLVMRRPQYDRNKRDMDPSQHQS 333
K L M + P + S
Sbjct: 330 KYLGMHLEPSEETPEKPQPRRRSS 353
>pdb|2BG9|C Chain C, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 369
Score = 184 bits (468), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 103/288 (35%), Positives = 148/288 (51%), Gaps = 45/288 (15%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
+WYD++LTW+ EY + +L + + IW PDIVL NN DG + V + G V
Sbjct: 60 HAWYDHRLTWNASEYSDISILRLRPELIWIPDIVLQNNNDGQYNVAYFCNVLVRPNGYVT 119
Query: 70 WKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLT 129
W PPAI++SSC I+V YFPFD Q C +KF + Y+ ++ + D+ +D
Sbjct: 120 WLPPAIFRSSCPINVLYFPFDWQNCSLKFTALNYNANEISM------------DLIIDPE 167
Query: 130 AFYTSVEWDILEVPAVRN---EKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGIS 186
AF + EW+I+ PA +N +KF + Y D+TF + +RRK LFY +N I PC+ IS
Sbjct: 168 AFTENGEWEIIHKPAKKNIYGDKFPNGTN--YQDVTFYLIIRRKPLFYVINFITPCVLIS 225
Query: 187 FLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXX 246
FL L FYLP++SGEK
Sbjct: 226 FLAALAFYLPAESGEK----------------------------MSTAICVLLAQAVFLL 257
Query: 247 XXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTH 294
++ +P T+L VPL+GK+++F M L T + +VLN HFR+P TH
Sbjct: 258 LTSQRLPETALAVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTH 305
>pdb|2BG9|E Chain E, Refined Structure Of The Nicotinic Acetylcholine Receptor
At 4a Resolution
Length = 370
Score = 177 bits (449), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/285 (34%), Positives = 150/285 (52%), Gaps = 36/285 (12%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
W DY+L+W+ EY G++++ +PS+ +W PD+VL NN DG FEV + G + W
Sbjct: 58 QWNDYRLSWNTSEYEGIDLVRIPSELLWLPDVVLENNVDGQFEVAYYANVLVYNDGSMYW 117
Query: 71 KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTA 130
PPAIY+S+C I V YFPFD Q C + F S TY+ +V+L+ EE G+D
Sbjct: 118 LPPAIYRSTCPIAVTYFPFDWQNCSLVFRSQTYNAHEVNLQLSAEE--------GIDPED 169
Query: 131 FYTSVEWDILEVPAVRNEKFYTCCDE-PYLDITFNITMRRKTLFYTVNLIIPCMGISFLT 189
F + EW I PA +N + D+ + +I F + ++RK LFY +N+I PC+ IS L
Sbjct: 170 FTENGEWTIRHRPAKKNYNWQLTKDDIDFQEIIFFLIIQRKPLFYIINIIAPCVLISSLV 229
Query: 190 ILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXXXXXXXXXXXXXXXXXXXA 249
+LV++LP+ +G + A+ I A
Sbjct: 230 VLVYFLPAQAGGQ--------KCTLSISVLLAQTI-------------------FLFLIA 262
Query: 250 EIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTH 294
+ +P TSL VPL+GK+++F M + + V+VLN+ R+P TH
Sbjct: 263 QKVPETSLNVPLIGKYLIFVMFVSLVIVTNCVIVLNVSLRTPNTH 307
>pdb|2QC1|B Chain B, Crystal Structure Of The Extracellular Domain Of The
Nicotinic Acetylcholine Receptor 1 Subunit Bound To
Alpha-Bungarotoxin At 1.9 A Resolution
Length = 212
Score = 166 bits (420), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/162 (49%), Positives = 104/162 (64%), Gaps = 10/162 (6%)
Query: 9 SQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRV 68
Q W DY L W+P +YGGV+ +H+PS+ IWRPD+VLYNNADG+F + TK L+YTG +
Sbjct: 58 KQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYNNADGDFAIVKFTKVLLDYTGHI 117
Query: 69 EWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDL 128
W PPAI+KS CEI V +FPFDEQ C MK G+ TYDG V + ++ DL
Sbjct: 118 TWTPPAIFKSYCEIIVTHFPFDEQNCSMKLGTRTYDGSAVAINPESDQP---------DL 168
Query: 129 TAFYTSVEWDILEVPAVRNEKFYTCC-DEPYLDITFNITMRR 169
+ F S EW I E ++ FY+CC PYLDIT++ M+R
Sbjct: 169 SNFMESGEWVIKEARGWKHWVFYSCCPTTPYLDITYHFVMQR 210
>pdb|1OED|A Chain A, Structure Of Acetylcholine Receptor Pore From Electron
Images
pdb|1OED|D Chain D, Structure Of Acetylcholine Receptor Pore From Electron
Images
Length = 227
Score = 111 bits (278), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 88/295 (29%), Positives = 124/295 (42%), Gaps = 93/295 (31%)
Query: 172 LFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXX 231
L++ VN+IIPC+ SFLT LVFYLP+DSGEK E+IP
Sbjct: 2 LYFVVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVFLLVIVELIPS----- 56
Query: 232 XXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSP 291
TS VPL+GK++LFTMI SI +TVVV+N H RSP
Sbjct: 57 -----------------------TSSAVPLIGKYMLFTMIFVISSIIITVVVINTHHRSP 93
Query: 292 QTHVMSPWVKKVFIHLLPKLL---VMRRPQYDRNKRDM--------DPSQHQSTCKV-HG 339
TH M WV+K+FI +P ++ M+R ++ + + D S Q T +V
Sbjct: 94 STHTMPQWVRKIFIDTIPNVMFFSTMKRASKEKQENKIFADDIDISDISGKQVTGEVIFQ 153
Query: 340 TPTRPPGXXXXXXXXXXXXXXXXXXXXXXXXMKKVSHHWHLCPELHKAIAGVRFIADHTK 399
TP +K P++ AI GV++IA+H K
Sbjct: 154 TP----------------------------LIKN--------PDVKSAIEGVKYIAEHMK 177
Query: 400 TAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGI 454
+ E + W Y AMV+D + L +F L +IG+ +
Sbjct: 178 SD---------EESSNAAEEWKY--------VAMVIDHILLCVFMLICIIGTVSV 215
>pdb|1OED|B Chain B, Structure Of Acetylcholine Receptor Pore From Electron
Images
Length = 250
Score = 102 bits (254), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 123/288 (42%), Gaps = 48/288 (16%)
Query: 172 LFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXX 231
LFY V IIPC+ IS L ILVFYLP D+GEK A+ +P
Sbjct: 2 LFYIVYTIIPCILISILAILVFYLPPDAGEKMSLSISALLAVTVFLLLLADKVPE----- 56
Query: 232 XXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSP 291
TSL VP++ ++++F MIL FS+ ++VVVLN+H RSP
Sbjct: 57 -----------------------TSLSVPIIIRYLMFIMILVAFSVILSVVVLNLHHRSP 93
Query: 292 QTHVMSPWVKKVFIHLLPKLLVMRRPQYDRNKRDMDPSQHQSTCKVHGTPTRPPGXXXXX 351
TH M W++++FI LP L ++RP + D P+ + +P G
Sbjct: 94 NTHTMPNWIRQIFIETLPPFLWIQRPVTTPSP-DSKPTIISRANDEYFI-RKPAGDFVCP 151
Query: 352 XXXXXXXXXXXXXXXXXX-XMKKVSHHWHLCPELHKAIAGVRFIADHTKTAVNDTKVKPL 410
+ ++ L +L +A+ +++IA+ ++A +K
Sbjct: 152 VDNARVAVQPERLFSEMKWHLNGLTQPVTLPQDLKEAVEAIKYIAEQLESASEFDDLK-- 209
Query: 411 EVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQA 458
W Y AMV DRLFL++F + IG+ I L A
Sbjct: 210 -------KDWQYV--------AMVADRLFLYVFFVICSIGTFSIFLDA 242
>pdb|3SH1|A Chain A, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|B Chain B, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|C Chain C, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|D Chain D, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|E Chain E, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|F Chain F, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|G Chain G, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|H Chain H, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|I Chain I, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
pdb|3SH1|J Chain J, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr
Length = 230
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 54/164 (32%), Positives = 85/164 (51%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
QSW L WDP EYG + + IW PDI Y++ +V A +N +G V+
Sbjct: 67 QSWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQNALVNSSGHVQ 125
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW+Y G+++DL+ ++ V
Sbjct: 126 YLPAQRLSFMCDPTGVDSE----EGATCAVKFGSWSYGGWEIDLKTDTDQ---------V 172
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R+E+FY CC EPY D+ + R +
Sbjct: 173 DLSSYYASSKYEILSATQTRSERFYECCKEPYPDVNLVVKFRER 216
>pdb|3SQ6|A Chain A, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|B Chain B, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|C Chain C, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|D Chain D, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|E Chain E, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|F Chain F, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|G Chain G, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|H Chain H, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|I Chain I, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ6|J Chain J, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera With Its
Agonist Epibatidine
pdb|3SQ9|A Chain A, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|B Chain B, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|C Chain C, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|D Chain D, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|E Chain E, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|F Chain F, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|G Chain G, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|H Chain H, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|I Chain I, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
pdb|3SQ9|J Chain J, Crystal Structures Of The Ligand Binding Domain Of A
Pentameric Alpha7 Nicotinic Receptor Chimera
Length = 204
Score = 97.8 bits (242), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 86/163 (52%), Gaps = 19/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
SW D+ L W+ EY GV+ + VP +W PD+ YN A EV A +N +G V++
Sbjct: 57 SWTDHYLQWNVSEYPGVKQVSVPISSLWVPDLAAYN-AISKPEVLTPQLALVNSSGHVQY 115
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +KFGSWT+ ++DL+ + D
Sbjct: 116 LPSIRQRFSCDVSGVDTE----SGATCKLKFGSWTHHSRELDLQMQE-----------AD 160
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
++ + ++++ V R+E+FY CC EPY D+TF +T R+K
Sbjct: 161 ISGYIPYSRFELVGVTQKRSERFYECCKEPYPDVTFTVTFRKK 203
>pdb|3SIO|A Chain A, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|B Chain B, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|C Chain C, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|D Chain D, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|E Chain E, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|F Chain F, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|G Chain G, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|H Chain H, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|I Chain I, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
pdb|3SIO|J Chain J, Ac-Achbp Ligand Binding Domain (Not Including Beta 9-10
Linker) Mutated To Human Alpha-7 Nachr
Length = 230
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 84/164 (51%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
QSW L WDP EYG + + IW PDI Y++ +V A +N +G V+
Sbjct: 67 QSWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQNALVNSSGHVQ 125
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW+Y G+++DL+ ++ V
Sbjct: 126 YLPAQRLSFMCDPTGVDSE----EGATCAVKFGSWSYGGWEIDLKTDTDQ---------V 172
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 173 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 216
>pdb|3T4M|A Chain A, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|B Chain B, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|C Chain C, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|D Chain D, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|E Chain E, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|F Chain F, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|G Chain G, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|H Chain H, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|I Chain I, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
pdb|3T4M|J Chain J, Ac-Achbp Ligand Binding Domain Mutated To Human Alpha-7
Nachr (Intermediate)
Length = 230
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V+
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQNALVTHDGSVQ 125
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW+Y GF++DL+ ++ V
Sbjct: 126 YLPAQRLSFMCDPTGVDSE----EGATCAVKFGSWSYSGFEIDLKTDTDQ---------V 172
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R +FY CC EPY D+ + R +
Sbjct: 173 DLSSYYASSKYEILSATQTRQVRFYECCKEPYPDVNLVVKFRER 216
>pdb|2KSR|A Chain A, Nmr Structures Of Tm Domain Of The N-Acetylcholine
Receptor B2 Subunit
Length = 164
Score = 95.1 bits (235), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 57/135 (42%), Positives = 72/135 (53%), Gaps = 28/135 (20%)
Query: 160 DITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXX 219
++ F RRK LFYT+NLIIPC+ I+ L ILVFYLPSD GEK
Sbjct: 17 NLYFQSNARRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLL 76
Query: 220 XAEIIPPXXXXXXXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICV 279
++I+PP TSL VPL+GK+++FTM+L TFSI
Sbjct: 77 ISKIVPP----------------------------TSLDVPLVGKYLMFTMVLVTFSIVT 108
Query: 280 TVVVLNIHFRSPQTH 294
+V VLN+H RSP TH
Sbjct: 109 SVCVLNVHHRSPTTH 123
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 15/26 (57%), Positives = 19/26 (73%)
Query: 432 AMVLDRLFLWIFTLAVLIGSAGIILQ 457
AMV+DRLFLWIF + G+ G+ LQ
Sbjct: 133 AMVIDRLFLWIFVFVCVFGTIGMFLQ 158
>pdb|2XNT|A Chain A, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|B Chain B, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|C Chain C, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|D Chain D, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|E Chain E, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|F Chain F, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|G Chain G, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|H Chain H, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|I Chain I, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNT|J Chain J, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|A Chain A, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|B Chain B, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|C Chain C, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|D Chain D, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNU|E Chain E, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|A Chain A, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|B Chain B, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|C Chain C, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|D Chain D, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|E Chain E, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|F Chain F, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|G Chain G, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|H Chain H, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|I Chain I, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
pdb|2XNV|J Chain J, Acetylcholine Binding Protein (Achbp) As Template For
Hierarchical In Silico Screening Procedures To Identify
Structurally Novel Ligands For The Nicotinic Receptors
Length = 236
Score = 92.0 bits (227), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 75 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQIAVVTHDGSVM 133
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 134 FIPAQRLSFMCDPTGVDSE----EGVTCAVKFGSWVYSGFEIDLKTDTDQ---------V 180
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 181 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 224
>pdb|2BYP|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
pdb|2BYP|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With Alpha-Conotoxin Imi
Length = 214
Score = 91.7 bits (226), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 64 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 122
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 123 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 169
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 170 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 213
>pdb|2XZ6|A Chain A, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|B Chain B, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|C Chain C, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|D Chain D, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|E Chain E, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|F Chain F, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|G Chain G, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|H Chain H, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|I Chain I, Mtset-Modified Y53c Mutant Of Aplysia Achbp
pdb|2XZ6|J Chain J, Mtset-Modified Y53c Mutant Of Aplysia Achbp
Length = 217
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQIAVVTHDGSVM 114
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 115 FIPAQRLSFMCDPTGVDSE----EGVTCAVKFGSWVYSGFEIDLKTDTDQ---------V 161
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 162 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 205
>pdb|2XZ5|A Chain A, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|B Chain B, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|C Chain C, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|D Chain D, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
pdb|2XZ5|E Chain E, Mmts-Modified Y53c Mutant Of Aplysia Achbp In Complex With
Acetylcholine
Length = 217
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQIAVVTHDGSVM 114
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 115 FIPAQRLSFMCDPTGVDSE----EGVTCAVKFGSWVYSGFEIDLKTDTDQ---------V 161
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 162 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 205
>pdb|2BYN|A Chain A, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|B Chain B, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|C Chain C, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|D Chain D, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYN|E Chain E, Crystal Structure Of Apo Achbp From Aplysia Californica
pdb|2BYQ|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYQ|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With Epibatidine
pdb|2BYR|A Chain A, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|B Chain B, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|C Chain C, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|D Chain D, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|E Chain E, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|F Chain F, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|G Chain G, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|H Chain H, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|I Chain I, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYR|J Chain J, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Methyllycaconitine
pdb|2BYS|A Chain A, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|B Chain B, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|C Chain C, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|D Chain D, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|E Chain E, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|F Chain F, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|G Chain G, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|H Chain H, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|I Chain I, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|2BYS|J Chain J, Crystal Structure Of Achbp From Aplysia Californica In
Complex With Lobeline
pdb|3C79|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C79|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With The Neonicotinoid Imidacloprid
pdb|3C84|A Chain A, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|B Chain B, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|C Chain C, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|D Chain D, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|3C84|E Chain E, Crystal Structure Of A Complex Of Achbp From Aplysia
Californica And The Neonicotinoid Thiacloprid
pdb|2WNC|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNC|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With
Tropisetron
pdb|2WNL|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|F Chain F, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|G Chain G, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|H Chain H, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|I Chain I, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
pdb|2WNL|J Chain J, Crystal Structure Of Aplysia Achbp In Complex With
Anabaseine
Length = 227
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 66 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 124
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 125 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 171
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 172 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 215
>pdb|3PMZ|A Chain A, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|B Chain B, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|C Chain C, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|D Chain D, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|E Chain E, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|F Chain F, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|G Chain G, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|H Chain H, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|I Chain I, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
pdb|3PMZ|J Chain J, Crystal Structure Of The Complex Of Acetylcholine Binding
Protein And D-Tubocurarine
Length = 227
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 66 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 124
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 125 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 171
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 172 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 215
>pdb|3GUA|A Chain A, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|B Chain B, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|C Chain C, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|D Chain D, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|E Chain E, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|F Chain F, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|G Chain G, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|H Chain H, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|I Chain I, Sulfates Bound In The Vestibule Of Achbp
pdb|3GUA|J Chain J, Sulfates Bound In The Vestibule Of Achbp
Length = 217
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 125
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 126 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 172
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 173 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 216
>pdb|2BR7|A Chain A, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|B Chain B, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|C Chain C, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|D Chain D, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR7|E Chain E, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With Hepes
pdb|2BR8|A Chain A, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|B Chain B, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|C Chain C, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|D Chain D, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2BR8|E Chain E, Crystal Structure Of Acetylcholine-Binding Protein (Achbp)
From Aplysia Californica In Complex With An Alpha-
Conotoxin Pnia Variant
pdb|2C9T|A Chain A, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|B Chain B, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|C Chain C, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|D Chain D, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|E Chain E, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|F Chain F, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|G Chain G, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|H Chain H, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|I Chain I, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2C9T|J Chain J, Crystal Structure Of Acetylcholine Binding Protein (Achbp)
From Aplysia Californica In Complex With Alpha-Conotoxin
Imi
pdb|2UZ6|A Chain A, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|B Chain B, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|C Chain C, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|D Chain D, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|E Chain E, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|F Chain F, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|G Chain G, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|H Chain H, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|I Chain I, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2UZ6|J Chain J, Achbp-targeted A-conotoxin Correlates Distinct Binding
Orientations With Nachr Subtype Selectivity.
pdb|2W8F|A Chain A, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|B Chain B, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|C Chain C, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|D Chain D, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|E Chain E, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|F Chain F, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|G Chain G, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|H Chain H, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|I Chain I, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8F|J Chain J, Aplysia Californica Achbp Bound To In Silico Compound 31
pdb|2W8G|A Chain A, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|B Chain B, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|C Chain C, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|D Chain D, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2W8G|E Chain E, Aplysia Californica Achbp Bound To In Silico Compound 35
pdb|2XYS|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYS|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With Strychnine
pdb|2XYT|A Chain A, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|B Chain B, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|C Chain C, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|D Chain D, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|E Chain E, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|F Chain F, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|G Chain G, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|H Chain H, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|I Chain I, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2XYT|J Chain J, Crystal Structure Of Aplysia Californica Achbp In Complex
With D-Tubocurarine
pdb|2Y7Y|A Chain A, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|B Chain B, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|C Chain C, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|D Chain D, Aplysia Californica Achbp In Apo State
pdb|2Y7Y|E Chain E, Aplysia Californica Achbp In Apo State
pdb|2Y54|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y54|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine- Binding Protein: A Structural And
Thermodynamic Analysis - (Fragment 1)
pdb|2Y56|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y56|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 3)
pdb|2Y57|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y57|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 4)
pdb|2Y58|A Chain A, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|B Chain B, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|C Chain C, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|D Chain D, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|2Y58|E Chain E, Fragment Growing Induces Conformational Changes In
Acetylcholine-Binding Protein: A Structural And
Thermodynamic Analysis - (Compound 6)
pdb|4AFO|A Chain A, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|B Chain B, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|C Chain C, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|D Chain D, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFO|E Chain E, Aplysia Californica Achbp In Complex With Cytisine
pdb|4AFT|A Chain A, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|B Chain B, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|C Chain C, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|D Chain D, Aplysia Californica Achbp In Complex With Varenicline
pdb|4AFT|E Chain E, Aplysia Californica Achbp In Complex With Varenicline
Length = 217
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQIAVVTHDGSVM 114
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 115 FIPAQRLSFMCDPTGVDSE----EGVTCAVKFGSWVYSGFEIDLKTDTDQ---------V 161
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 162 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 205
>pdb|2PGZ|A Chain A, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|B Chain B, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|C Chain C, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|D Chain D, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PGZ|E Chain E, Crystal Structure Of Cocaine Bound To An Ach-binding
Protein
pdb|2PH9|A Chain A, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|B Chain B, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|C Chain C, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|D Chain D, Galanthamine Bound To An Ach-Binding Protein
pdb|2PH9|E Chain E, Galanthamine Bound To An Ach-Binding Protein
pdb|4DBM|A Chain A, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|B Chain B, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|C Chain C, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|D Chain D, Aplysia Californica-Achbp In Complex With Triazole 18
pdb|4DBM|E Chain E, Aplysia Californica-Achbp In Complex With Triazole 18
Length = 230
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 125
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 126 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 172
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 173 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 216
>pdb|2YME|A Chain A, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|B Chain B, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|C Chain C, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|D Chain D, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|E Chain E, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|F Chain F, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|G Chain G, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|H Chain H, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|I Chain I, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
pdb|2YME|J Chain J, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Granisetron
Length = 205
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRP-VQVLSPQIAVVTHDGSVM 114
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 115 FIPAQRLSFMCDPTGVDSE----EGVTCAVKFGSWVYSGFEIDLKTDTDQ---------V 161
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 162 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 205
>pdb|2X00|D Chain D, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
Length = 227
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 66 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 124
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 125 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 171
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 172 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 215
>pdb|2WN9|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WN9|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With 4-0h-
Dmxba
pdb|2WNJ|A Chain A, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|B Chain B, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|C Chain C, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|D Chain D, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WNJ|E Chain E, Crystal Structure Of Aplysia Achbp In Complex With Dmxba
pdb|2WZY|A Chain A, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|B Chain B, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|C Chain C, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|D Chain D, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|E Chain E, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|F Chain F, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|G Chain G, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|H Chain H, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|I Chain I, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2WZY|J Chain J, Crystal Structure Of A-Achbp In Complex With 13-Desmethyl
Spirolide C
pdb|2X00|A Chain A, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|2X00|B Chain B, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|2X00|C Chain C, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|2X00|E Chain E, Crystal Structure Of A-Achbp In Complex With Gymnodimine A
pdb|3PEO|A Chain A, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|B Chain B, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|C Chain C, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|D Chain D, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|E Chain E, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|F Chain F, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|G Chain G, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|H Chain H, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|I Chain I, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
pdb|3PEO|J Chain J, Crystal Structure Of Acetylcholine Binding Protein
Complexed With Metocurine
Length = 228
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 80/164 (48%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y++ +V A + + G V
Sbjct: 67 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSST-RPVQVLSPQIAVVTHDGSVM 125
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC +KFGSW Y GF++DL+ ++ V
Sbjct: 126 FIPAQRLSFMCDPTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTDQ---------V 172
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 173 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 216
>pdb|1OED|C Chain C, Structure Of Acetylcholine Receptor Pore From Electron
Images
Length = 260
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/145 (35%), Positives = 72/145 (49%), Gaps = 28/145 (19%)
Query: 172 LFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXX 231
LFY +N I PC+ ISFL L FYLP++SGEK ++ +P
Sbjct: 2 LFYVINFITPCVLISFLASLAFYLPAESGEKMSTAISVLLAQAVFLLLTSQRLPE----- 56
Query: 232 XXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSP 291
T+L VPL+GK+++F M L T I +VLN HFR+P
Sbjct: 57 -----------------------TALAVPLIGKYLMFIMSLVTGVIVNCGIVLNFHFRTP 93
Query: 292 QTHVMSPWVKKVFIHLLPKLLVMRR 316
THV+S VK++F+ LP++L M R
Sbjct: 94 STHVLSTRVKQIFLEKLPRILHMSR 118
>pdb|2YMD|A Chain A, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|B Chain B, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|C Chain C, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|D Chain D, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|E Chain E, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|F Chain F, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|G Chain G, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|H Chain H, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|I Chain I, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
pdb|2YMD|J Chain J, Crystal Structure Of A Mutant Binding Protein
(5htbp-achbp) In Complex With Serotonin
(5-hydroxytryptamine)
Length = 212
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 78/164 (47%), Gaps = 17/164 (10%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVE 69
Q W L WDP EYG + + IW PDI Y + +V A + + G V
Sbjct: 56 QRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYESTRP-VQVLSPQIAVVTHDGSVM 114
Query: 70 WKPPAIYKSSCE---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGV 126
+ P C+ +D E + TC + FGSW Y GF++DL+ ++ V
Sbjct: 115 FIPAQRLSFMCDPTGVDSE----EGVTCALTFGSWVYSGFEIDLKTDTDQ---------V 161
Query: 127 DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
DL+++Y S +++IL R + Y+CC EPY+D+ + R +
Sbjct: 162 DLSSYYASSKYEILSATQTRQVQHYSCCPEPYIDVNLVVKFRER 205
>pdb|4AFG|A Chain A, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|B Chain B, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|C Chain C, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|D Chain D, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFG|E Chain E, Capitella Teleta Achbp In Complex With Varenicline
pdb|4AFH|A Chain A, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|B Chain B, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|C Chain C, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|D Chain D, Capitella Teleta Achbp In Complex With Lobeline
pdb|4AFH|E Chain E, Capitella Teleta Achbp In Complex With Lobeline
pdb|4B5D|A Chain A, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|B Chain B, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|C Chain C, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|D Chain D, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
pdb|4B5D|E Chain E, Capitella Teleta Achbp In Complex With Psychonicline
(3-((2(S)-
Azetidinyl)methoxy)-5-((1s,
2r)-2-(2-Hydroxyethyl)cyclopropyl) Pyridine)
Length = 230
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
SW D L WDP+ + + + D IW PDI L+N+ D + + T+A + G V W
Sbjct: 68 SWVDTILRWDPEPPFDFQKIEISPDEIWTPDIKLFNSVDLDMTLDRTTQAIVFSNGTVLW 127
Query: 71 KPPAIYKSSC--EIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDL 128
PPA+ K C + DV+ +C +FGSW Y +VD+ +D++ L
Sbjct: 128 IPPAVLKVLCVSQDDVD-------SCHFQFGSWVYSVDEVDIHFMDDKAEV--------L 172
Query: 129 TAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKT 171
FY +ILE A R E Y CC+ Y+++ + + +R +
Sbjct: 173 LDFYQD-SLEILENSAQRQEVVYPCCESAYVEMKYLLALRSEN 214
>pdb|2LLY|A Chain A, Nmr Structures Of The Transmembrane Domains Of The Nachr
A4 Subunit
Length = 137
Score = 82.4 bits (202), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 52/123 (42%), Positives = 63/123 (51%), Gaps = 28/123 (22%)
Query: 172 LFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXX 231
LFYT+NLIIPC+ IS LT+LVFYLPS+ GEK EIIP
Sbjct: 8 LFYTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVFLLLITEIIPS----- 62
Query: 232 XXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSP 291
TS V P +G+++LFTMI T SI +TV VLN+H RSP
Sbjct: 63 -----------------------TSSVSPSIGEYLLFTMIFVTLSIVITVFVLNVHHRSP 99
Query: 292 QTH 294
+TH
Sbjct: 100 ETH 102
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 10/22 (45%), Positives = 17/22 (77%)
Query: 435 LDRLFLWIFTLAVLIGSAGIIL 456
+DR+FLW+F + L+G+ G+ L
Sbjct: 109 IDRIFLWMFIIVCLLGTVGLFL 130
>pdb|2LM2|A Chain A, Nmr Structures Of The Transmembrane Domains Of The Achr B2
Subunit
Length = 137
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 65/127 (51%), Gaps = 28/127 (22%)
Query: 168 RRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPX 227
+ LFYT+NLIIPC+ I+ L ILVFYLPSD GEK ++I+PP
Sbjct: 4 EEEPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVFLLLISKIVPP- 62
Query: 228 XXXXXXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIH 287
TS P +G++++FTM+L TFSI +V VLN+H
Sbjct: 63 ---------------------------TSSDSPSVGEYLMFTMVLVTFSIVTSVCVLNVH 95
Query: 288 FRSPQTH 294
RSP+TH
Sbjct: 96 HRSPETH 102
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 12/23 (52%), Positives = 16/23 (69%)
Query: 435 LDRLFLWIFTLAVLIGSAGIILQ 457
+DRLFLWIF + G+ G+ LQ
Sbjct: 109 IDRLFLWIFVFVCVFGTIGMFLQ 131
>pdb|1OED|E Chain E, Structure Of Acetylcholine Receptor Pore From Electron
Images
Length = 260
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 75/162 (46%), Gaps = 27/162 (16%)
Query: 172 LFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXX 231
LFY +N+I PC+ IS L +LV++LP+ +G + A+ I
Sbjct: 2 LFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLL--------AQTI------- 46
Query: 232 XXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSP 291
A+ +P TSL VPL+GK+++F M + + V+VLN+ R+P
Sbjct: 47 ------------FLFLIAQKVPETSLNVPLIGKYLIFVMFVSMLIVMNCVIVLNVSLRTP 94
Query: 292 QTHVMSPWVKKVFIHLLPKLLVMRRPQYDRNKRDMDPSQHQS 333
TH +S +K +F+ LPK L M+ + P + S
Sbjct: 95 NTHSLSEKIKHLFLGFLPKYLGMQLEPSEETPEKPQPRRRSS 136
>pdb|2BJ0|A Chain A, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|B Chain B, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|C Chain C, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|D Chain D, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
pdb|2BJ0|E Chain E, Crystal Structure Of Achbp From Bulinus Truncatus Revals
The Conserved Structural Scaffold And Sites Of Variation
In Nicotinic Acetylcholine Receptors
Length = 203
Score = 61.6 bits (148), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 71/144 (49%), Gaps = 12/144 (8%)
Query: 28 EMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE-IDVEY 86
+ + +P +W PD+ YN A E+ A + ++ G V + P + +C+ I+V+
Sbjct: 71 DQVSLPVSKMWTPDLSFYN-AIAAPELLSADRVVVSKDGSVIYVPSQRVRFTCDLINVDT 129
Query: 87 FPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVR 146
P TC +K GSWT+D Q L + E+G V++ ++ S ++D+L
Sbjct: 130 EP--GATCRIKVGSWTHDNKQFAL--ITGEEGV------VNIAEYFDSPKFDLLSATQSL 179
Query: 147 NEKFYTCCDEPYLDITFNITMRRK 170
N K Y+CC+ Y DI R+K
Sbjct: 180 NRKKYSCCENMYDDIEITFAFRKK 203
>pdb|2ZJU|A Chain A, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|B Chain B, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|C Chain C, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|D Chain D, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJU|E Chain E, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Imidacloprid
pdb|2ZJV|A Chain A, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|B Chain B, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|C Chain C, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|D Chain D, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
pdb|2ZJV|E Chain E, Crystal Structure Of Lymnaea Stagnalis Acetylcholine
Binding Protein (Ls-Achbp) Complexed With Clothianidin
Length = 214
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W D L WD + + VP +W PD+ YN A EV A + G V +
Sbjct: 61 TWSDRTLAWDSSH--SPDQVSVPISSLWVPDLAAYN-AISKPEVLTPQLARVVSDGEVLY 117
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +K GSWT+ ++ + E D
Sbjct: 118 MPSIRQRFSCDVSGVDTESGA----TCRIKIGSWTHHSREISVDPTTENSD--------D 165
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
F ++IL+V +N Y+CC E Y D+ ++ R+K
Sbjct: 166 SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 208
>pdb|4AOE|A Chain A, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|B Chain B, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|C Chain C, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|D Chain D, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
pdb|4AOE|E Chain E, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 2
(Bgachbp2)
Length = 205
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 69/159 (43%), Gaps = 13/159 (8%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
SW D L+W E L +PS +IW P I +YN+ G + + G V +
Sbjct: 59 SWKDRSLSWS-NECTTFNELTLPSKYIWLPHIEVYNSI-GKPGIHSDQLVRVYKDGTVTF 116
Query: 71 KPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTA 130
P + SC ++ C +KFG WTYD V LDE + VDLT
Sbjct: 117 VPQYTIRFSCALE-NVTTEQGAACTLKFGPWTYD---VRDLVLDESQQ-------VDLTT 165
Query: 131 FYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRR 169
+ + ++E N+K Y CC + + DI +T ++
Sbjct: 166 YAGGERFQLIEAKQKVNKKTYPCCPQSFEDIELRVTFKK 204
>pdb|4AOD|A Chain A, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|B Chain B, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|C Chain C, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|D Chain D, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
pdb|4AOD|E Chain E, Biomphalaria Glabrata Acetylcholine-Binding Protein Type 1
(Bgachbp1)
Length = 205
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 71/161 (44%), Gaps = 19/161 (11%)
Query: 12 WYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWK 71
W D L W E+ + L VP IW PDI ++++ G E+ A ++ G V +
Sbjct: 60 WKDRCLNW-FNEFTSFKELTVPIAEIWTPDIFIFDSV-GAPEIFSDKLARVSQDGTVTYV 117
Query: 72 PPAIYKSSC---EIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDL 128
P + SC ++ +E TC +K GSWT+ ++ L V+ VDL
Sbjct: 118 PQLKVRLSCPLADLKLET----GVTCSLKSGSWTHSTQELTLE----------VNAKVDL 163
Query: 129 TAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRR 169
+ + + +L N K Y CC E Y D T + T R+
Sbjct: 164 GDYASDTRFQLLNATQQVNRKQYPCCPETYEDTTLSFTFRK 204
>pdb|2LKG|A Chain A, Wsa Major Conformation
pdb|2LKH|A Chain A, Wsa Minor Conformation
Length = 140
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 51/119 (42%), Gaps = 28/119 (23%)
Query: 172 LFYTVNLIIPCMGISFLTILVFYLPSDSGEKXXXXXXXXXXXXXXXXXXAEIIPPXXXXX 231
L++ VN+I PC S LT LVFYLP+DSGEK
Sbjct: 50 LYFVVNVIEPCKKFSELTGLVFYLPTDSGEK----------------------------M 81
Query: 232 XXXXXXXXXXXXXXXXXAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRS 290
E+IP TS VPL+GK++LFT SI +T V+N H RS
Sbjct: 82 TESKSVLKSLTEKLKKIVELIPSTSSAVPLIGKYMLFTKEFVESSIKITEEVINTHHRS 140
>pdb|4ALX|A Chain A, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|B Chain B, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|C Chain C, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|D Chain D, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|E Chain E, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|F Chain F, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|G Chain G, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|H Chain H, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|I Chain I, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
pdb|4ALX|J Chain J, Crystal Structure Of Ls-Achbp Complexed With The Potent
Nachr Antagonist Dhbe
Length = 229
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W D L W+ + + VP +W PD+ YN A EV A + G V +
Sbjct: 76 TWSDRTLAWNSSH--SPDQVSVPISSLWVPDLAAYN-AISKPEVLTPQLARVVSDGEVLY 132
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +K GSWT+ ++ + E D
Sbjct: 133 MPSIRQRFSCDVSGVDTE----SGATCRIKIGSWTHHSREISVDPTTENSD--------D 180
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
F ++IL+V +N Y+CC E Y D+ ++ R+K
Sbjct: 181 SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 223
>pdb|1UV6|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|F Chain F, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|G Chain G, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|H Chain H, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|I Chain I, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1UV6|J Chain J, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Carbamylcholine
pdb|1YI5|A Chain A, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|B Chain B, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|C Chain C, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|D Chain D, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|1YI5|E Chain E, Crystal Structure Of The A-Cobratoxin-Achbp Complex
pdb|3U8J|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8J|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3531
(1-(Pyridin-3-Yl)-1,4- Diazepane)
pdb|3U8K|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|K Chain K, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|L Chain L, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|M Chain M, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|N Chain N, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|O Chain O, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|P Chain P, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|Q Chain Q, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|R Chain R, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|S Chain S, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8K|T Chain T, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3573
(1-(5-Ethoxypyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8L|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3570
(1-(5-Phenylpyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|K Chain K, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|L Chain L, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|M Chain M, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|N Chain N, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|O Chain O, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|P Chain P, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|Q Chain Q, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|R Chain R, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|S Chain S, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8M|T Chain T, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3920
(1-(6-Bromopyridin-3-Yl)-1, 4-Diazepane)
pdb|3U8N|A Chain A, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|B Chain B, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|C Chain C, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|D Chain D, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|E Chain E, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|F Chain F, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|G Chain G, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|H Chain H, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|I Chain I, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|J Chain J, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|K Chain K, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|L Chain L, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|M Chain M, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|N Chain N, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|O Chain O, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|P Chain P, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|Q Chain Q, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|R Chain R, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|S Chain S, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3U8N|T Chain T, Crystal Structure Of The Acetylcholine Binding Protein
(Achbp) From Lymnaea Stagnalis In Complex With Ns3950
(1-(6-Bromo-5-Ethoxypyridin- 3-Yl)-1,4-Diazepane)
pdb|3ZDG|A Chain A, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|B Chain B, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|C Chain C, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|D Chain D, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|E Chain E, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|F Chain F, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|G Chain G, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|H Chain H, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|I Chain I, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|J Chain J, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|K Chain K, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|L Chain L, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|M Chain M, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|N Chain N, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|O Chain O, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|P Chain P, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|Q Chain Q, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|R Chain R, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|S Chain S, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDG|T Chain T, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue 3-(dimethylamino)butyl
Dimethylcarbamate (dmabc)
pdb|3ZDH|A Chain A, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|B Chain B, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|C Chain C, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|D Chain D, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|E Chain E, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|F Chain F, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|G Chain G, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|H Chain H, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|I Chain I, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
pdb|3ZDH|J Chain J, Crystal Structure Of Ls-achbp Complexed With
Carbamoylcholine Analogue N,n-dimethyl-4-(1-methyl-1h-
Imidazol-2-yloxy)butan-2-amine
Length = 210
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W D L W+ + + VP +W PD+ YN A EV A + G V +
Sbjct: 57 TWSDRTLAWNSSH--SPDQVSVPISSLWVPDLAAYN-AISKPEVLTPQLARVVSDGEVLY 113
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +K GSWT+ ++ + E D
Sbjct: 114 MPSIRQRFSCDVSGVDTESGA----TCRIKIGSWTHHSREISVDPTTENSD--------D 161
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
F ++IL+V +N Y+CC E Y D+ ++ R+K
Sbjct: 162 SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 204
>pdb|1UX2|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|F Chain F, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|G Chain G, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|H Chain H, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|I Chain I, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1UX2|J Chain J, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
Length = 212
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W D L W+ + + VP +W PD+ YN A EV A + G V +
Sbjct: 59 TWSDRTLAWNSSH--SPDQVSVPISSLWVPDLAAYN-AISKPEVLTPQLARVVSDGEVLY 115
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +K GSWT+ ++ + E D
Sbjct: 116 MPSIRQRFSCDVSGVDTESGA----TCRIKIGSWTHHSREISVDPTTENSD--------D 163
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
F ++IL+V +N Y+CC E Y D+ ++ R+K
Sbjct: 164 SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 206
>pdb|1UW6|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|F Chain F, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|G Chain G, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|H Chain H, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|I Chain I, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|J Chain J, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|K Chain K, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|L Chain L, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|M Chain M, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|N Chain N, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|O Chain O, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|P Chain P, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|Q Chain Q, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|R Chain R, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|S Chain S, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
pdb|1UW6|T Chain T, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
In Complex With Nicotine
Length = 211
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W D L W+ + + VP +W PD+ YN A EV A + G V +
Sbjct: 58 TWSDRTLAWNSSH--SPDQVSVPISSLWVPDLAAYN-AISKPEVLTPQLARVVSDGEVLY 114
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +K GSWT+ ++ + E D
Sbjct: 115 MPSIRQRFSCDVSGVDTE----SGATCRIKIGSWTHHSREISVDPTTENSD--------D 162
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
F ++IL+V +N Y+CC E Y D+ ++ R+K
Sbjct: 163 SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 205
>pdb|1I9B|A Chain A, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|B Chain B, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|C Chain C, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|D Chain D, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
pdb|1I9B|E Chain E, X-Ray Structure Of Acetylcholine Binding Protein (Achbp)
Length = 217
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 69/163 (42%), Gaps = 18/163 (11%)
Query: 11 SWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEW 70
+W D L W+ + + VP +W PD+ YN A EV A + G V +
Sbjct: 64 TWSDRTLAWNSSH--SPDQVSVPISSLWVPDLAAYN-AISKPEVLTPQLARVVSDGEVLY 120
Query: 71 KPPAIYKSSCEI---DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVD 127
P + SC++ D E TC +K GSWT+ ++ + E D
Sbjct: 121 MPSIRQRFSCDVSGVDTESGA----TCRIKIGSWTHHSREISVDPTTENSD--------D 168
Query: 128 LTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRK 170
F ++IL+V +N Y+CC E Y D+ ++ R+K
Sbjct: 169 SEYFSQYSRFEILDVTQKKNSVTYSCCPEAYEDVEVSLNFRKK 211
>pdb|2K58|B Chain B, Nmr Structures Of The First Transmembrane Domain Of The
Neuronal Acetylcholine Receptor Beta 2 Subunit
Length = 35
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 27/35 (77%), Positives = 30/35 (85%)
Query: 168 RRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEK 202
RRK LFYT+NLIIPC+ I+ L ILVFYLPSD GEK
Sbjct: 1 RRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEK 35
>pdb|4ILC|A Chain A, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|B Chain B, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|C Chain C, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|D Chain D, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
pdb|4ILC|E Chain E, The Glic Pentameric Ligand-gated Ion Channel In Complex
With Sulfates
Length = 320
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|3TLS|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
pdb|3TLS|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel E19'p Mutant
In A Locally-Closed Conformation (Lc2 Subtype)
Length = 321
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|3EAM|A Chain A, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|B Chain B, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|C Chain C, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|D Chain D, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|3EAM|E Chain E, An Open-Pore Structure Of A Bacterial Pentameric Ligand-
Gated Ion Channel
pdb|4HFI|A Chain A, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|B Chain B, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|C Chain C, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|D Chain D, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4HFI|E Chain E, The Glic Pentameric Ligand-gated Ion Channel At 2.4 A
Resolution
pdb|4IL4|A Chain A, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|B Chain B, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|C Chain C, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|D Chain D, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
pdb|4IL4|E Chain E, The Pentameric Ligand-gated Ion Channel Glic In Complex
With Se-ddm
Length = 317
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 42 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 100
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 101 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 148
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 149 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 205
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 206 LFILFISWTAFW 217
>pdb|4IL9|A Chain A, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|B Chain B, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|C Chain C, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|D Chain D, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4IL9|E Chain E, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Bromide
pdb|4ILA|A Chain A, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|B Chain B, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|C Chain C, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|D Chain D, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILA|E Chain E, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Cesium
pdb|4ILB|A Chain A, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|B Chain B, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|C Chain C, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|D Chain D, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
pdb|4ILB|E Chain E, The Pentameric Ligand-gated Ion Channel Glic A237f In
Complex With Rubidium
Length = 320
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|3EI0|A Chain A, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|B Chain B, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|C Chain C, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|D Chain D, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
pdb|3EI0|E Chain E, Structure Of The E221a Mutant Of The Gloebacter Violaceus
Pentameric Ligand Gated Ion Channnel (Glic)
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 42 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 100
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 101 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 148
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 149 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 205
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 206 LFILFISWTAFW 217
>pdb|3TLU|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3TLU|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU8|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
pdb|3UU8|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-24'
Mutant Reduced In Solution
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|2XQ9|A Chain A, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|B Chain B, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|C Chain C, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|D Chain D, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
pdb|2XQ9|E Chain E, Pentameric Ligand Gated Ion Channel Glic Mutant E221a In
Complex With Tetraethylarsonium (Teas)
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 42 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 100
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 101 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 148
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 149 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 205
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 206 LFILFISWTAFW 217
>pdb|3EHZ|A Chain A, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|B Chain B, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|C Chain C, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|D Chain D, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|3EHZ|E Chain E, X-Ray Structure Of The Pentameric Ligand Gated Ion Channel
Of Gloebacter Violaceus (Glic) In A Presumptive Open
Conformation
pdb|2XQ3|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ3|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Br-Lidocaine
pdb|2XQ4|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ4|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetramethylarsonium (Tmas)
pdb|2XQ5|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ5|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetraethylarsonium (Teas)
pdb|2XQ6|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ6|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cesium Ion (Cs+)
pdb|2XQ7|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ7|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Cadmium Ion (Cd2+)
pdb|2XQ8|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQ8|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Zinc Ion (Zn2+)
pdb|2XQA|A Chain A, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|B Chain B, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|C Chain C, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|D Chain D, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|2XQA|E Chain E, Pentameric Ligand Gated Ion Channel Glic In Complex With
Tetrabutylantimony (Tbsb)
pdb|4F8H|A Chain A, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|B Chain B, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|C Chain C, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|D Chain D, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
pdb|4F8H|E Chain E, X-Ray Structure Of The Anesthetic Ketamine Bound To The
Glic Pentameric Ligand-Gated Ion Channel
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 42 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 100
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 101 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 148
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 149 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 205
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 206 LFILFISWTAFW 217
>pdb|3TLW|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3TLW|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Oxidized Mutant In A Locally-Closed Conformation (Lc2
Subtype)
pdb|3UU4|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UU4|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In The Crystal In A Locally-Closed
Conformation (Lc1 Subtype)
pdb|3UUB|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|F Chain F, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|G Chain G, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|H Chain H, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|I Chain I, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
pdb|3UUB|J Chain J, The Glic Pentameric Ligand-Gated Ion Channel Loop2-21'
Mutant Reduced In Solution
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|3P4W|A Chain A, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|B Chain B, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|C Chain C, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|D Chain D, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P4W|E Chain E, Structure Of Desflurane Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|A Chain A, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|B Chain B, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|C Chain C, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|D Chain D, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
pdb|3P50|E Chain E, Structure Of Propofol Bound To A Pentameric Ligand-Gated
Ion Channel, Glic
Length = 318
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 42 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 100
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 101 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 148
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 149 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 205
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 206 LFILFISWTAFW 217
>pdb|3LSV|A Chain A, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|B Chain B, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|C Chain C, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|D Chain D, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
pdb|3LSV|E Chain E, Structure Of The A237f Mutant Of The Pentameric Ligand
Gated Channel From Gloeobacter Violaceus
Length = 317
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 42 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 100
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 101 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 148
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 149 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 205
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 206 LFILFISWTAFW 217
>pdb|3TLV|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3TLV|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Oxidized Mutant In A Locally-Closed Conformation (Lc3
Subtype)
pdb|3UU6|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
pdb|3UU6|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-22'
Mutant Reduced In Solution
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 79/195 (40%), Gaps = 20/195 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFYLPS 197
+ I F++ F+ S
Sbjct: 210 LFILFISWTAFWSTS 224
>pdb|3UU3|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU3|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Oxidized Mutant In A Locally-Closed Conformation (Lc1
Subtype)
pdb|3UU5|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
pdb|3UU5|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel Loop2-20'
Mutant Reduced In Solution
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|3TLT|A Chain A, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|B Chain B, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|C Chain C, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|D Chain D, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
pdb|3TLT|E Chain E, The Glic Pentameric Ligand-Gated Ion Channel H11'f Mutant
In A Locally-Closed Conformation (Lc1 Subtype)
Length = 321
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/192 (23%), Positives = 78/192 (40%), Gaps = 20/192 (10%)
Query: 7 LCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGN----FEVTLATKATL 62
S SW D +L +DP GV + + IW P+I N + +++++ T+
Sbjct: 46 FLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARDADVVDISVSPDGTV 104
Query: 63 NYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVV 122
Y R + +D +PFD QT + + D + L +D EK
Sbjct: 105 QYLERFS------ARVLSPLDFRRYPFDSQTLHIYLIVRSVDTRNIVL-AVDLEK----- 152
Query: 123 DIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPC 182
+G + F T WDI AV + D + + + + R+ Y N+I+P
Sbjct: 153 -VGKNDDVFLTG--WDIESFTAVVKPANFALEDRLESKLDYQLRISRQYFSYIPNIILPM 209
Query: 183 MGISFLTILVFY 194
+ I F++ F+
Sbjct: 210 LFILFISWTAFW 221
>pdb|3RHW|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RHW|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab And Ivermectin
pdb|3RI5|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RI5|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Picrotoxin
pdb|3RIA|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIA|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Iodide.
pdb|3RIF|A Chain A, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|B Chain B, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|C Chain C, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|D Chain D, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate.
pdb|3RIF|E Chain E, C. Elegans Glutamate-Gated Chloride Channel (Glucl) In
Complex With Fab, Ivermectin And Glutamate
Length = 347
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/186 (23%), Positives = 77/186 (41%), Gaps = 28/186 (15%)
Query: 10 QSWYDYKLTWDPKEYGGVEMLHVPSDH-IWRPDIVLYNNADG--------NFEVTLATKA 60
+SW D +L++ K G + + + H IW PD N N + +
Sbjct: 57 ESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDG 116
Query: 61 TLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTN 120
T+ Y+ R+ SC + ++Y+P D Q C + S+ Y D+ +L +E
Sbjct: 117 TVLYSVRIS------LVLSCPMYLQYYPMDVQQCSIDLASYAYT--TKDIEYLWKEHSPL 168
Query: 121 VVDIGV--DLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDITFNITMRRKTLFYTVNL 178
+ +G+ L +F + +V N Y+C + I ++R+ FY + L
Sbjct: 169 QLKVGLSSSLPSFQLT-NTSTTYCTSVTNTGIYSC-------LRTTIQLKREFSFYLLQL 220
Query: 179 IIP-CM 183
IP CM
Sbjct: 221 YIPSCM 226
>pdb|1KC4|B Chain B, Nmr Structural Analysis Of The Complex Formed Between
Alpha- Bungarotoxin And The Principal Alpha-Neurotoxin
Binding Sequence On The Alpha7 Subunit Of A Neuronal
Nicotinic Acetylcholine Receptor
pdb|1KL8|B Chain B, Nmr Structural Analysis Of The Complex Formed Between
Alpha- Bungarotoxin And The Principal Alpha-Neurotoxin
Binding Sequence On The Alpha7 Subunit Of A Neuronal
Nicotinic Acetylcholine Receptor
Length = 20
Score = 30.8 bits (68), Expect = 1.8, Method: Composition-based stats.
Identities = 11/19 (57%), Positives = 12/19 (63%)
Query: 142 VPAVRNEKFYTCCDEPYLD 160
+P R E FY CC EPY D
Sbjct: 1 IPGKRTESFYECCKEPYPD 19
>pdb|2VL0|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
pdb|2VL0|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic)
Length = 321
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 98 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 153
>pdb|2YKS|A Chain A, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|B Chain B, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|C Chain C, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|D Chain D, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|E Chain E, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|F Chain F, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|G Chain G, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|H Chain H, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|I Chain I, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
pdb|2YKS|J Chain J, Pentameric Ligand Gated Ion Channel Elic Mutant F246a
Length = 321
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 98 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 153
>pdb|3RQU|A Chain A, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|B Chain B, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|C Chain C, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|D Chain D, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|E Chain E, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|F Chain F, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|G Chain G, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|H Chain H, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|I Chain I, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQU|J Chain J, Crystal Structure Of A Prokaryotic Pentameric Ligand-Gated
Ion Channel, Elic
pdb|3RQW|A Chain A, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|B Chain B, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|C Chain C, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|D Chain D, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|E Chain E, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|F Chain F, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|G Chain G, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|H Chain H, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|I Chain I, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|3RQW|J Chain J, Crystal Structure Of Acetylcholine Bound To A Prokaryotic
Pentameric Ligand-Gated Ion Channel, Elic
pdb|2YN6|A Chain A, Pentameric Ligand-Gated Ion Channel Elic In Complex With
Barium
pdb|2YN6|B Chain B, Pentameric Ligand-Gated Ion Channel Elic In Complex With
Barium
pdb|2YN6|C Chain C, Pentameric Ligand-Gated Ion Channel Elic In Complex With
Barium
pdb|2YN6|D Chain D, Pentameric Ligand-Gated Ion Channel Elic In Complex With
Barium
pdb|2YN6|E Chain E, Pentameric Ligand-Gated Ion Channel Elic In Complex With
Barium
Length = 322
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 98 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 153
>pdb|4A97|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A97|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Zopiclone
pdb|4A98|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|4A98|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With
Bromoflurazepam
pdb|2YOE|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|2YOE|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) In Complex With Gaba
And Flurazepam
pdb|3ZKR|A Chain A, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|B Chain B, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|C Chain C, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|D Chain D, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|E Chain E, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|F Chain F, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|G Chain G, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|H Chain H, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|I Chain I, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
pdb|3ZKR|J Chain J, X-ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (elic) In Complex With
Bromoform
Length = 307
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 88 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 143
>pdb|3UQ4|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
pdb|3UQ4|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant F247l (F16l)
Length = 324
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 100 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 155
>pdb|3UQ5|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
pdb|3UQ5|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240a F247l (L9a
F16l) In The Presence Of 10 Mm Cysteamine
Length = 324
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 100 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 155
>pdb|3UQ7|A Chain A, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|B Chain B, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|C Chain C, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|D Chain D, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|E Chain E, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|F Chain F, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|G Chain G, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|H Chain H, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|I Chain I, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
pdb|3UQ7|J Chain J, X-Ray Structure Of A Pentameric Ligand Gated Ion Channel
From Erwinia Chrysanthemi (Elic) Mutant L240s F247l (L9s
F16l) In Presence Of 10 Mm Cysteamine
Length = 324
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 2/58 (3%)
Query: 66 GRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVD 123
GRV + + S ++D FPFD Q V++ ++Y+ Q LR D + T +D
Sbjct: 100 GRVIYNARFLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQ--LRFSDIQVYTENID 155
>pdb|4F5C|A Chain A, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
pdb|4F5C|B Chain B, Crystal Structure Of The Spike Receptor Binding Domain Of
A Porcine Respiratory Coronavirus In Complex With The
Pig Aminopeptidase N Ectodomain
Length = 959
Score = 30.0 bits (66), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 112 HLDEEKGTNVVDIGVDLTAFYTS--VEWDILEVPAVRN------EKFYTCCDEPYLDITF 163
H+ E + ++ DL FY S +E ++ +V A K + C DEP + TF
Sbjct: 151 HMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATF 210
Query: 164 NITM 167
NIT+
Sbjct: 211 NITL 214
>pdb|4HOL|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Poly- Alanine
Length = 908
Score = 30.0 bits (66), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 112 HLDEEKGTNVVDIGVDLTAFYTS--VEWDILEVPAVRN------EKFYTCCDEPYLDITF 163
H+ E + ++ DL FY S +E ++ +V A K + C DEP + TF
Sbjct: 107 HMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATF 166
Query: 164 NITM 167
NIT+
Sbjct: 167 NITL 170
>pdb|4H5H|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Cleaved Poly-Alanine
pdb|4HOM|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Substance P
Length = 908
Score = 30.0 bits (66), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 112 HLDEEKGTNVVDIGVDLTAFYTS--VEWDILEVPAVRN------EKFYTCCDEPYLDITF 163
H+ E + ++ DL FY S +E ++ +V A K + C DEP + TF
Sbjct: 107 HMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATF 166
Query: 164 NITM 167
NIT+
Sbjct: 167 NITL 170
>pdb|4FKE|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N
pdb|4FKH|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Alanine
pdb|4FKK|A Chain A, Crystal Structure Of Porcine Aminopeptidase-N Complexed
With Bestatin
Length = 909
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 31/64 (48%), Gaps = 8/64 (12%)
Query: 112 HLDEEKGTNVVDIGVDLTAFYTS--VEWDILEVPAVRN------EKFYTCCDEPYLDITF 163
H+ E + ++ DL FY S +E ++ +V A K + C DEP + TF
Sbjct: 108 HMYEMESEFQGELADDLAGFYRSEYMEGNVKKVLATTQMQSTDARKSFPCFDEPAMKATF 167
Query: 164 NITM 167
NIT+
Sbjct: 168 NITL 171
>pdb|4FYQ|A Chain A, Human Aminopeptidase N (Cd13)
pdb|4FYR|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Bestatin
pdb|4FYS|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Angiotensin
Iv
pdb|4FYT|A Chain A, Human Aminopeptidase N (Cd13) In Complex With Amastatin
Length = 903
Score = 28.9 bits (63), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 31/135 (22%), Positives = 56/135 (41%), Gaps = 23/135 (17%)
Query: 41 DIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCEIDVEYFPFDEQTCVMKFGS 100
D+++ ++ N+ ++ + L G + PP I K+ EY + ++K
Sbjct: 54 DVIIIHSKKLNYTLSQGHRVVLRGVGGSQ--PPDIDKTELVEPTEYLVVHLKGSLVKDSQ 111
Query: 101 WTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTS--VEWDILEV------PAVRNEKFYT 152
+ D E +G ++ DL FY S +E ++ +V A K +
Sbjct: 112 YEMDS---------EFEG----ELADDLAGFYRSEYMEGNVRKVVATTQMQAADARKSFP 158
Query: 153 CCDEPYLDITFNITM 167
C DEP + FNIT+
Sbjct: 159 CFDEPAMKAEFNITL 173
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.324 0.139 0.447
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 13,540,638
Number of Sequences: 62578
Number of extensions: 528884
Number of successful extensions: 1161
Number of sequences better than 100.0: 74
Number of HSP's better than 100.0 without gapping: 47
Number of HSP's successfully gapped in prelim test: 27
Number of HSP's that attempted gapping in prelim test: 1016
Number of HSP's gapped (non-prelim): 100
length of query: 488
length of database: 14,973,337
effective HSP length: 103
effective length of query: 385
effective length of database: 8,527,803
effective search space: 3283204155
effective search space used: 3283204155
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 53 (25.0 bits)