Query psy7197
Match_columns 488
No_of_seqs 294 out of 1774
Neff 7.5
Searched_HMMs 29240
Date Fri Aug 16 20:38:38 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7197.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7197hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4aq5_C Acetylcholine receptor 100.0 2.7E-84 9.1E-89 694.5 -20.2 422 2-468 73-507 (522)
2 4aq5_E Acetylcholine receptor 100.0 1.4E-84 4.7E-89 692.0 -24.5 417 2-468 49-479 (488)
3 4aq5_A Acetylcholine receptor 100.0 1.4E-83 4.8E-88 679.3 -25.2 380 2-462 74-457 (461)
4 4aq5_B Acetylcholine receptor 100.0 3.9E-83 1.3E-87 681.6 -22.4 412 2-467 74-491 (493)
5 2bg9_B Acetylcholine receptor 100.0 6.6E-72 2.3E-76 576.7 -20.9 319 2-468 50-369 (370)
6 2bg9_C Acetylcholine receptor 100.0 3.1E-71 1.1E-75 571.5 -22.6 316 2-465 52-368 (369)
7 2bg9_E Acetylcholine receptor 100.0 6.5E-71 2.2E-75 569.4 -24.4 319 2-464 49-369 (370)
8 2bg9_A Acetylcholine receptor 100.0 1.5E-69 5E-74 559.4 -23.9 311 2-457 50-361 (370)
9 3tlw_A GLR4197 protein, GLIC; 100.0 4.3E-59 1.5E-63 472.6 -10.5 263 2-306 41-305 (321)
10 3rqw_A ELIC pentameric ligand 100.0 1.4E-57 5E-62 461.6 -14.2 265 2-312 33-312 (322)
11 3rhw_A Avermectin-sensitive gl 100.0 2E-57 6.8E-62 465.1 -16.0 276 2-316 49-331 (347)
12 1oed_B Acetylcholine receptor 100.0 4.1E-48 1.4E-52 375.2 -25.6 242 171-465 1-249 (250)
13 1oed_C Acetylcholine receptor 100.0 9.1E-48 3.1E-52 374.9 -26.7 248 171-465 1-259 (260)
14 1oed_E Acetylcholine receptor 100.0 1.5E-47 5.1E-52 373.4 -26.0 248 171-464 1-258 (260)
15 1oed_A Acetylcholine receptor 100.0 9.6E-46 3.3E-50 353.8 -25.2 216 171-458 1-219 (227)
16 2qc1_B Acetylcholine receptor 100.0 3E-39 1E-43 308.2 10.3 161 2-171 51-212 (212)
17 4aoe_A Acetylcholine-binding p 100.0 1.7E-39 5.9E-44 307.3 7.8 155 2-169 50-204 (205)
18 4aod_A Acetylcholine-binding p 100.0 4.6E-39 1.6E-43 304.7 7.5 155 2-169 50-204 (205)
19 4afh_A ACHBP; acetylcholine-bi 100.0 4.5E-38 1.5E-42 303.1 9.4 163 2-178 59-221 (230)
20 2wn9_A Soluble acetylcholine r 100.0 6.6E-38 2.3E-42 302.0 10.0 165 2-180 59-226 (228)
21 3sq6_A ACHBP, neuronal acetylc 100.0 4.4E-38 1.5E-42 298.2 8.5 154 2-170 48-203 (204)
22 3igq_A GLR4197 protein; plgic 100.0 9.1E-38 3.1E-42 295.2 8.3 161 2-174 37-197 (201)
23 1uw6_A Acetylcholine-binding p 100.0 3.9E-36 1.3E-40 286.4 9.5 159 2-176 49-211 (211)
24 2bj0_A Acetylcholine-binding p 100.0 6.5E-35 2.2E-39 276.4 8.5 155 2-170 46-203 (203)
25 2ksr_A Neuronal acetylcholine 100.0 3.6E-34 1.2E-38 259.8 -20.5 118 150-295 7-124 (164)
26 2lkg_A Acetylcholine receptor; 99.9 8.2E-28 2.8E-32 212.5 -27.5 117 146-290 16-140 (140)
27 2lly_A Neuronal acetylcholine 99.9 2.4E-26 8.2E-31 203.0 -18.7 117 166-310 2-119 (137)
28 1vry_A Glycine receptor alpha- 98.8 8.9E-12 3E-16 97.2 -8.6 52 200-251 2-53 (76)
29 2lly_A Neuronal acetylcholine 97.1 0.00013 4.6E-09 63.7 1.8 33 431-464 105-137 (137)
30 3rqw_A ELIC pentameric ligand 89.9 0.027 9.2E-07 55.9 -2.5 57 221-278 250-316 (322)
31 3rhw_A Avermectin-sensitive gl 89.3 0.036 1.2E-06 55.6 -2.2 32 221-252 264-295 (347)
32 3tlw_A GLR4197 protein, GLIC; 85.4 0.088 3E-06 52.1 -1.9 32 221-252 247-278 (321)
33 2lkg_A Acetylcholine receptor; 77.4 0.26 8.9E-06 42.8 -1.7 31 221-251 99-130 (140)
34 1mot_A Glycine receptor alpha- 76.1 0.047 1.6E-06 33.8 -4.9 27 200-226 2-28 (28)
35 2ksr_A Neuronal acetylcholine 72.6 0.35 1.2E-05 43.2 -2.2 32 431-463 132-163 (164)
36 2bg9_A Acetylcholine receptor 71.1 0.15 5.2E-06 51.5 -5.5 31 221-251 261-292 (370)
37 2bg9_C Acetylcholine receptor 63.4 0.26 8.9E-06 49.8 -5.6 31 221-251 260-291 (369)
38 2bg9_E Acetylcholine receptor 60.7 0.3 1E-05 49.4 -5.8 31 221-251 262-293 (370)
39 2bg9_B Acetylcholine receptor 59.4 0.34 1.2E-05 48.9 -5.6 31 221-251 258-289 (370)
40 4aq5_B Acetylcholine receptor 54.6 1.1 3.6E-05 47.2 -3.0 32 221-252 291-323 (493)
41 4aq5_A Acetylcholine receptor 44.0 0.9 3.1E-05 47.3 -5.5 32 221-252 285-317 (461)
42 1vry_A Glycine receptor alpha- 37.9 0.19 6.4E-06 38.9 -8.8 41 246-287 20-60 (76)
43 4aq5_E Acetylcholine receptor 32.9 1.7 5.8E-05 45.5 -5.6 32 221-252 269-301 (488)
44 4aq5_C Acetylcholine receptor 29.4 2.5 8.6E-05 44.6 -5.1 31 221-251 296-327 (522)
45 1oed_A Acetylcholine receptor 28.2 1.8 6.3E-05 40.5 -5.7 31 221-251 51-82 (227)
46 1oed_B Acetylcholine receptor 23.0 2.4 8.3E-05 40.3 -6.0 31 221-251 51-82 (250)
47 1oed_E Acetylcholine receptor 22.2 2.6 8.9E-05 40.3 -6.0 31 221-251 52-83 (260)
No 1
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=100.00 E-value=2.7e-84 Score=694.50 Aligned_cols=422 Identities=33% Similarity=0.574 Sum_probs=299.9
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....+++.|++||+|.|.+|++++++|+
T Consensus 73 ~t~~vwl~q~W~D~RL~Wnp~~y~gi~~l~vp~~~IW~PDi~l~N~~d~~~~~~~~~nv~V~~dG~V~~~~~~~~~ssC~ 152 (522)
T 4aq5_C 73 LTTNVWMDHAWYDHRLTWNASEYSDISILRLRPELIWIPDIVLQNNNDGQYNVAYFCNVLVRPNGYVTWLPPAIFRSSCP 152 (522)
T ss_dssp EEEEEEEEEEEECTTCCCCCCCCCTCSCEEECGGGSCCCCEEETTTCSSCCBSCSSCCEEECSSSEEEECCEEEEEECCC
T ss_pred EEEEEEEeeeEeCcccCCCchhcCCceEEeeccCCEECCcEeccccccCCccccccceEEEeCCccEEEEcccccccccc
Confidence 46789999999999999999999999999999999999999999999998876555788999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeecccc---CceeEeeeeeccccccceeeeeEeeceeeccccccc-CCCC
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEK---GTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTC-CDEP 157 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~---~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~-~~~~ 157 (488)
||+++||||+|+|+|+|+||+|+++++++.|..+.. +.......++.++|..+|||++.+.+..++...+.| +++.
T Consensus 153 mdl~~FPfD~Q~C~L~f~S~~Y~~~~v~l~~~~~~~~~~~~~~~~~~~d~~~f~~~gEW~l~~~~~~~~~~~~~~~~~~~ 232 (522)
T 4aq5_C 153 INVLYFPFDWQNCSLKFTALNYNANEISMDLMTDTIDGKDYPIEWIIIDPEAFTENGEWEIIHKPAKKNIYGDKFPNGTN 232 (522)
T ss_dssp CTTTSCSTTCCEEEEEEEETTCCTTTCCEEC---------------CCSTTSCCTTCSEEEEECCEEEEECCCSSCSSCC
T ss_pred cccCcCCCcCceEeEEEecccccCceeEEEeccCcccccCccceeeeccHHHceecceEEEeeeEEEEEeeeccccCCCC
Confidence 999999999999999999999999999999876531 111222346788999999999999887766554444 4456
Q ss_pred eeeeEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhh
Q psy7197 158 YLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISI 237 (488)
Q Consensus 158 ys~i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~ 237 (488)
|++++|+|++||+++||++++++||+++++++|++||+|++++||+++++|+||++++|
T Consensus 233 y~~l~~~~~lrR~~~~Yii~l~iP~~liv~Ls~lsF~Lp~d~~eRisLgIT~LLt~tvf--------------------- 291 (522)
T 4aq5_C 233 YQDVTFYLIIRRKPLFYVINFITPCVLISFLAALAFYLPAESGEKMSTAICVLLAQAVF--------------------- 291 (522)
T ss_dssp CEEEEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHTTHHHHHTTCHHHHHHHHHHHHHH---------------------
T ss_pred cceEEEEEEEecccceeeeehhhHHHHHHHHHHheeecCCCcCceEEehHHHHHHHHHH---------------------
Confidence 99999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceeccc-C
Q psy7197 238 LLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMR-R 316 (488)
Q Consensus 238 ~~~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~-~ 316 (488)
++.+++.+|++|.++|+||+|+++||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|||+ |
T Consensus 292 -------l~~v~~~LP~tS~~vPlI~~y~~~~m~lv~lSll~tviVlnl~~r~~~~~~mp~wvr~~fl~~l~~~l~m~~~ 364 (522)
T 4aq5_C 292 -------LLLTSQRLPETALAVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHVLSTRVKQIFLEKLPRILHMSRV 364 (522)
T ss_dssp -------HHHHHHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHHHHHHHHHSCCSSCC-----------------------
T ss_pred -------HHHHHhcCCcccCCccHHHHHHHHHHHHHHHHHHHHheEEEEEccCCCCCCCChHHHHHHHHhCchheEEecC
Confidence 88889999999888999999999999999999999999999999999999999999999999999999999 9
Q ss_pred CCccCCCCCCCccccccccccCCCCCCC-CCCCCCCC--CCC--CCCCCCCCCCCC---CCCCCccCCCCCCChhhhhhc
Q psy7197 317 PQYDRNKRDMDPSQHQSTCKVHGTPTRP-PGDLPLDD--IES--EPLDPLPPPIPP---LPPMKKVSHHWHLCPELHKAI 388 (488)
Q Consensus 317 p~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~~~--~~~~~~~~~~~~---~~~~~~~~~~~~~~~~l~~~~ 388 (488)
|+++...........+..+......... ....+.++ +.+ ++.+........ ..+.+.......+.+++++++
T Consensus 365 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 444 (522)
T 4aq5_C 365 DEIEQPDWQNDLKLRRSSSVGYISKAQEYFNIKSRSELMFEKQSERHGLVPRVTPRIGFGNNNENIAASDQLHDEIKSGI 444 (522)
T ss_dssp -----------------------------------------------------------------------------CCT
T ss_pred CCccccccccccccccccccccccccccccccCCccccccccccccCcccccccCccccCCcccccccccccCHHHHHHH
Confidence 8654211110000000000000000000 00001111 000 000100000000 000000111223568999999
Q ss_pred cceeeecccccccccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCCccc
Q psy7197 389 AGVRFIADHTKTAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDRVPI 468 (488)
Q Consensus 389 ~~v~~I~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~~~~ 468 (488)
++++||++|+|++++++++++ |||| ||||+||+|||+|++++++||++||++|+..+.++.|.
T Consensus 445 ~~v~~ia~~~~~~~~~~~~~~---------dWk~--------va~V~DRl~l~~f~~~~~~gt~~i~~~~~~~~~~~~p~ 507 (522)
T 4aq5_C 445 DSTNYIVKQIKEKNAYDEEVG---------NWNL--------VGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPAKPF 507 (522)
T ss_dssp TTTTHHHHHHHHHHHHHHHHH---------HTTC--------CCSSHHHHHHHHHHHHHHHHHHHHHHHHTTTSSSCC--
T ss_pred HHHHHHHHHHhhhhhhhhhcc---------ceeE--------eeeeHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCCC
Confidence 999999999999999999999 9999 99999999999999999999999999999988877765
No 2
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=100.00 E-value=1.4e-84 Score=691.95 Aligned_cols=417 Identities=33% Similarity=0.620 Sum_probs=300.8
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....+++.|++||+|.|.+|++++++|+
T Consensus 49 ~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v~~~~IW~PDi~l~N~~d~~~~~~~~~nv~v~~~G~V~~~~~~~~~s~C~ 128 (488)
T 4aq5_E 49 LTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIPSELLWLPDVVLENNVDGQFEVAYYANVLVYNDGSMYWLPPAIYRSTCP 128 (488)
T ss_dssp EEEEEEEEEEEECCTTCCCTTTTTTCSCCCCCTTSSCCCCEECSSSCCSCCBSCSSSCCCBCTTSEEEECCEEBCEECCC
T ss_pred eeeeeeeeeEEECcccCcCchhcCCceEEecCccCEECCceehhccccccccccccccEEEeCCceEEEecceeEEeecc
Confidence 56789999999999999999999999999999999999999999999998876555789999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeeccccccc-CCCCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTC-CDEPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~-~~~~ys~ 160 (488)
||+++||||+|+|+|+|+||+|+++++++.|..+. +.......++.++|..+|||++.+.+..++...+.| +++.|++
T Consensus 129 mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~~-~~~~~~~~~d~~~~~~~~eW~l~~~~~~~~~~~~~~~~~~~y~~ 207 (488)
T 4aq5_E 129 IAVTYFPFDWQNCSLVFRSQTYNAHEVNLQLSAEE-GEVVEWIHIDPEDFTENGEWTIRHRPAKKNYNWQLTKDDIDFQE 207 (488)
T ss_dssp CSSSSSSSSCCCCCEEEEESSSCSSSCCEECCCSC-C-------CGGGSCCTTCSEEEEECCCEEECCCCTTCCCSCCCE
T ss_pred cccccCCCcCceeeEEeeeeccccceEEEEeccCC-CcceeeeeccHHHccccceEEEEeeEEEEEEeeeccCCCCCcce
Confidence 99999999999999999999999999999987653 222222346788999999999999887776654444 4456999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCC-CCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSD-SGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILL 239 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~-s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~ 239 (488)
++|+|++||+++||++++++||+++++++|++||+|++ +|||+++++|+||++++|
T Consensus 208 l~~~~~lrR~~~~Y~i~l~iP~~liv~Ls~lsF~Lp~~a~~eRvsLgIt~LLt~tvf----------------------- 264 (488)
T 4aq5_E 208 IIFFLIIQRKPLFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIF----------------------- 264 (488)
T ss_dssp EEECCEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHSCSTHHHHHHHHHHHHHHH-----------------------
T ss_pred EEEEEEEccchhheehhHhHHHHHHHHHHHHHhcCCccccCceEEEehHHHHHHHHH-----------------------
Confidence 99999999999999999999999999999999999999 699999999999999999
Q ss_pred hhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCc
Q psy7197 240 SLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQY 319 (488)
Q Consensus 240 ~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~ 319 (488)
++.+++.+|++|.++|+||+|+++||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|||++|.+
T Consensus 265 -----l~~v~~~LP~tS~~vPlI~~y~~~~m~lv~~Sll~tv~Vlnl~~r~~~~~~mp~w~r~~~l~~l~~~l~m~~p~~ 339 (488)
T 4aq5_E 265 -----LFLIAQKVPETSLNVPLIGKYLIFVMFVSLVIVTNCVIVLNVSLRTPNTHSLSEKIKHLFLEFLPKYLGMHLEPS 339 (488)
T ss_dssp -----HHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHHHHTTCSTTTCC------------------------
T ss_pred -----HHHHHhhCCccccCccHHHHHHHHHHHHHHHHHHHHhhEEEEEccCCCCCcCChhHhhhhHhhCcceeEecCCcc
Confidence 888899999999889999999999999999999999999999999999999999999999999999999999965
Q ss_pred cCCCCCCCccccccccccCCCCCCC---CCCCCCCC--CCC--CCCCCCCCC--CCCC---CCCCccCCCCCCChhhhhh
Q psy7197 320 DRNKRDMDPSQHQSTCKVHGTPTRP---PGDLPLDD--IES--EPLDPLPPP--IPPL---PPMKKVSHHWHLCPELHKA 387 (488)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~--~~~--~~~~~~~~~--~~~~---~~~~~~~~~~~~~~~l~~~ 387 (488)
+.......+ ++..+ .+...+. ....+.++ +.+ ++.+..... .... .+.........+.++++++
T Consensus 340 ~~~~~~~~~--~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 415 (488)
T 4aq5_E 340 EETPEKPQP--RRRSS--FGIMIKAEEYILKKPRSELMFEEQKDRHGLKRVNKMTSDIDIGTTVDLYKDLANFAPEIKSC 415 (488)
T ss_dssp -------------------------------------------------------------------------------H
T ss_pred ccccccccc--ccccc--cccccccccccccCCccccccccccccCcccccccccCccccCCCccccccccccCHHHHHH
Confidence 422111000 00000 0000000 00001000 000 000100000 0000 0000001112356899999
Q ss_pred ccceeeecccccccccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCCcc
Q psy7197 388 IAGVRFIADHTKTAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDRVP 467 (488)
Q Consensus 388 ~~~v~~I~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~~~ 467 (488)
+++++|||+|+|++++++++++ |||| ||||+||+|||+|++++++||++||++|+..+..+.|
T Consensus 416 ~~~v~~ia~~~~~~~~~~~~~~---------dWk~--------va~V~DR~~l~~f~~~~~~gt~~i~~~~~~~~~~~~p 478 (488)
T 4aq5_E 416 VEACNFIAKSTKEQNDSGSENE---------NWVL--------IGKVIDKACFWIALLLFSLGTLAIFLTGHLNQVPEFP 478 (488)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH---------HHHT--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCC--
T ss_pred HHHHHHHHHHHhhhhHHhhhhh---------cceE--------EEeeHHHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Confidence 9999999999999999999999 9999 9999999999999999999999999999988877665
Q ss_pred c
Q psy7197 468 I 468 (488)
Q Consensus 468 ~ 468 (488)
.
T Consensus 479 ~ 479 (488)
T 4aq5_E 479 F 479 (488)
T ss_dssp -
T ss_pred C
Confidence 4
No 3
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=100.00 E-value=1.4e-83 Score=679.35 Aligned_cols=380 Identities=44% Similarity=0.850 Sum_probs=301.1
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....++++|++||+|.|.+|++++++|+
T Consensus 74 ~t~~~~l~~~W~D~rL~Wnp~~y~gi~~l~vp~~~IW~PDi~l~N~~d~~~~~~~~~~v~v~~dG~V~~~~~~~~~s~C~ 153 (461)
T 4aq5_A 74 VETNVRLRQQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADGDFAIVHMTKLLLDYTGKIMWTPPAIFKSYCE 153 (461)
T ss_dssp EEEEEEEEEEECCTTCBCCTTTHHHHSSEEEEGGGSCCCCEEESSCCCSCCTTCSSCEEEECSBCCEEECCEEEEEEECC
T ss_pred EEEEEEEeeeeECcccCCChhhcCCccEEEecCCCEECCceeeecccccccccccccceEEcCCccEEEecccccccccc
Confidence 56889999999999999999999999999999999999999999999998875555689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCC-Ceee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDE-PYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~-~ys~ 160 (488)
||+++||||+|+|+++|+||+|+++++++.+..+ ++++++|..+|||++.+.+..++...|.||++ +|++
T Consensus 154 mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~---------~~~l~~~~~~~eW~l~~~~~~~~~~~y~~~~~~~y~~ 224 (461)
T 4aq5_A 154 IIVTHFPFDQQNCTMKLGIWTYDGTKVSISPESD---------RPDLSTFMESGEWVMKDYRGWKHWVYYTCCPDTPYLD 224 (461)
T ss_dssp CCGGGSSSSCEEEEEEEEESSCCTTTEEEECCCC---------CCSGGGCCTTCSSEEEEEEEEEEECCCSSSSSCCCEE
T ss_pred ccccCCCCccCccCeEEeccccCCceEEEEeccc---------cccHHhhhccCceEEeeeeeEEEEEeecCcCCCCcce
Confidence 9999999999999999999999999999987543 57888999999999999998888888999988 9999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLS 240 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~ 240 (488)
+++++++||+++||++++++||+++++++|++||+|++++||+++++|++|++++|
T Consensus 225 l~~~~~l~R~~~~Y~i~l~iP~~liv~ls~lsF~Lp~~s~eRv~LgiT~LLt~tvf------------------------ 280 (461)
T 4aq5_A 225 ITYHFIMQRIPLYFVVNVIIPCLLFSFLTVLVFYLPTDSGEKMTLSISVLLSLTVF------------------------ 280 (461)
T ss_dssp EEEEEEEECCCTHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGTTHHHHHHHHHHHH------------------------
T ss_pred EEEEEEEEecccceeeehhhhHHHHHHHHHheEeccccccceeehhHHHHHHHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred hceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceec---ccCC
Q psy7197 241 LTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLV---MRRP 317 (488)
Q Consensus 241 ~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~---~~~p 317 (488)
++.+.+.+|++|..+|+|++|+.+||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|| |++|
T Consensus 281 ----l~~v~~~LP~tS~~vplI~~y~~~~m~~v~~sll~tv~Vl~l~~r~~~~~~mp~w~r~~~l~~l~~~l~~~~~~~p 356 (461)
T 4aq5_A 281 ----LLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIVTVVVINTHHRSPSTHTMPQWVRKIFINTIPNVMFFSTMKRA 356 (461)
T ss_dssp ----HHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHCCTTTC--------------------------
T ss_pred ----HHHHHhhcCcccCCcCHHHHHHHHHHHHHHHHHHHHhhheeeeccCCCCCCCCHHHHHHHHHhhHHHhhhhhcCCC
Confidence 888899999998899999999999999999999999999999999999999999999999999999999 9998
Q ss_pred CccCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeeccc
Q psy7197 318 QYDRNKRDMDPSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIADH 397 (488)
Q Consensus 318 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~ 397 (488)
+.+.+..+ ..+ ... ..++..+ ...+ ..... .......++++++++++++|++|
T Consensus 357 ~~~~~~~~----~~~-----~~~--------~~~~~~~----~~~~--~~~~~----~~~~~~~~~~~~~~~~~~~i~~~ 409 (461)
T 4aq5_A 357 SKEKQENK----IFA-----DDI--------DISDISG----KQVT--GEVIF----QTPLIKNPDVKSAIEGVKYIAEH 409 (461)
T ss_dssp --------------------------------------------------------------------CCHHHHHHHHHH
T ss_pred Cccccccc----CCc-----ccc--------CcccccC----CCCC--Ccccc----ccccccCHHHHHHHHHHHHHHHH
Confidence 64321100 000 000 0000000 0000 00000 01112457899999999999999
Q ss_pred ccccccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccc
Q psy7197 398 TKTAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLY 462 (488)
Q Consensus 398 ~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~ 462 (488)
++++++++++++ |||| ||||+||+|||+|++++++||++||++|+..+
T Consensus 410 ~~~~~~~~~~~~---------dWk~--------va~v~Dr~~l~~f~~~~~~gt~~i~~~~~~~~ 457 (461)
T 4aq5_A 410 MKSDEESSNAAE---------EWKY--------VAMVIDHILLCVFMLICIIGTVSVFAGRLIEL 457 (461)
T ss_dssp HHHHHHHHHHHH---------HTTS--------CSSSHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHHhhhh---------hhee--------eeeeHHHHHHHHHHHHHHHHHHHHHHHHHhhh
Confidence 999999999999 9999 99999999999999999999999999876543
No 4
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=100.00 E-value=3.9e-83 Score=681.60 Aligned_cols=412 Identities=41% Similarity=0.717 Sum_probs=301.6
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....+++.|++||+|.|.+|++++++|+
T Consensus 74 ~t~~v~l~~~W~D~rL~Wnp~~y~gi~~l~v~~~~IW~PDi~l~N~~d~~~~~~~~~nv~v~~~G~V~~~~~~~~~s~C~ 153 (493)
T 4aq5_B 74 MTTSVFLNLAWTDYRLQWDPAAYEGIKDLSIPSDDVWQPDIVLMNNNDGSFEITLHVNVLVQHTGAVSWHPSAIYRSSCT 153 (493)
T ss_dssp EEEEEECEEEEECTTCCCCHHHHSSCSCEEECSCSSCCCCCEESSCCCSCEESSSSSCEEECTTSEEEECCEEEEEECCS
T ss_pred EEEEEEeecceECcccCCChhhcCCeeEEecccccCccCcEEEecccccccccccccceEEecCCCEEEeeeeeeeeccc
Confidence 56789999999999999999999999999999999999999999999998876555689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccC-ceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKG-TNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~-~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~ 160 (488)
||+++||||+|+|+++|+||+|+++++++.|..+..+ ....+..+++++|..+|||++.+.+..+....|.| +|++
T Consensus 154 mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~l~~f~~~~eW~l~~~~~~~~~~~~~~---~y~~ 230 (493)
T 4aq5_B 154 IKVMYFPFDWQNCTMVFKSYTYDTSEVILQHALDAKGEREVKEIMINQDAFTENGQWSIEHKPSRKNWRSDDP---SYED 230 (493)
T ss_dssp CTTCSSSTTCCCCEEEEECSSCCBTSCEEECCCCC---------CCSGGGCCTTCSSBCCCCCCEECCCTTSS---SBCC
T ss_pred ccccCCCccceeEEEEEeeecCccccEEEEeccCCCCccceecccccHHHhccccceeeeeeeEEEEeecCCC---CccE
Confidence 9999999999999999999999999999998654322 11123457889999999999999988877766654 8999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLS 240 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~ 240 (488)
++++|++||+++||++++++||+++++++|++||+|++++||+++++|++|++++|
T Consensus 231 l~~~~~lrR~~~~Y~i~l~iP~~liv~Ls~lsF~Lp~~s~eRvsLgiT~LLt~tvf------------------------ 286 (493)
T 4aq5_B 231 VTFYLIIQRKPLFYIVYTIVPCILISILAILVFYLPPDAGEKMSLSISALLALTVF------------------------ 286 (493)
T ss_dssp EEEECCCBCCCCSSTTTTHHHHHHHHHHHHHHHHSTTTCGGGGTHHHHHHHHHHHH------------------------
T ss_pred EEEEEEEEeccceeeehhhhhHHHHHHHHHhEEecCCCCCceEEehHHHHHHHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred hceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCcc
Q psy7197 241 LTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQYD 320 (488)
Q Consensus 241 ~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~~ 320 (488)
++.+++.+|++|.++|+|++|+.+||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|||++|+.+
T Consensus 287 ----l~~v~~~LP~tS~~vPlI~~y~~~~m~~v~lsll~tv~Vl~l~~r~~~~~~mp~w~r~~~l~~l~~~l~m~~~~~~ 362 (493)
T 4aq5_B 287 ----LLLLADKVPETSLSVPIIISYLMFIMILVAFSVILSVVVLNLHHRSPNTHTMPNWIRQIFIETLPPFLWIQRPVTT 362 (493)
T ss_dssp ----HHHHHHHTTTTTTSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTC--------------------------
T ss_pred ----HHHHHhcCCccccCCCchHhHHHHHHHHHHHHHHHHHhheeeeccCCCCCcCCHHHHHHHHHhCcceEEecCCccc
Confidence 8888888999988899999999999999999999999999999999999999999999999999999999999654
Q ss_pred CCCCCCCccccccccccCCC-CCCCCCCCCCCCCC----CCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeec
Q psy7197 321 RNKRDMDPSQHQSTCKVHGT-PTRPPGDLPLDDIE----SEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIA 395 (488)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~ 395 (488)
..+.....+... .. ... ..++.+..-..... .+..+. .+ .......+........++++++++++++|+
T Consensus 363 ~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 436 (493)
T 4aq5_B 363 PSPDSKPTIISR-AN--DEYFIRKPAGDFVCPVDNARVAVQPERL-FS--EMKWHLNGLTQPVTLPQDLKEAVEAIKYIA 436 (493)
T ss_dssp ----------------------------------------------------------------------CCHHHHHHHH
T ss_pred cccccccccccc-cc--ccccccCCCccccccccccccccccccc-cc--cccccccCcccccccCHHHHHHHHHHHHHH
Confidence 321110000000 00 000 00000000000000 000000 00 000000000011145689999999999999
Q ss_pred ccccccccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCCcc
Q psy7197 396 DHTKTAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDRVP 467 (488)
Q Consensus 396 ~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~~~ 467 (488)
+|++++++++++++ |||| ||||+||+|||+|++++++||++||+++|..++.+.|
T Consensus 437 ~~~~~~~~~~~~~~---------dWk~--------va~V~DR~~l~~f~~~~~~gt~~i~~~~~~~~~~~~p 491 (493)
T 4aq5_B 437 EQLESASEFDDLKK---------DWQY--------VAMVADRLFLYIFITMCSIGTFSIFLDASHNVPPDNP 491 (493)
T ss_dssp HHHHHHHHHHHHHH---------HHHS--------CSHHHHHHHHHHHHHHTTHHHHHHHHHHHHHSSSSTT
T ss_pred HHHHhhhHhhhhhc---------ceEE--------EEEehhHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCC
Confidence 99999999999999 9999 9999999999999999999999999999887665554
No 5
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=6.6e-72 Score=576.69 Aligned_cols=319 Identities=48% Similarity=0.860 Sum_probs=291.9
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....+++.|++||+|.|.+|++++++|+
T Consensus 50 ~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~~~~IW~PDi~~~N~~~~~~~~~~~~~~~v~~~G~V~~~~~~~~~~~C~ 129 (370)
T 2bg9_B 50 MTTSVFLNLAWTDYRLQWDPAAYEGIKDLSIPSDDVWQPDIVLMNNNDGSFEITLHVNVLVQHTGAVSWHPSAIYRSSCT 129 (370)
T ss_dssp EEEEEECEEEEECTTSCCCTTTTSSCSEEEEESSSSCCCCEEESSCCCSCEESSSSCEEEEETTSEEEECCEEEEEECCC
T ss_pred eEEEEEEeeeeECcccCcCccccCCeeEEEechhhccCCCccccccccccccccccceEEEeCCceEEEEecceEEEEcc
Confidence 46789999999999999999999999999999999999999999999998875545689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeee-eccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRH-LDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~-~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~ 160 (488)
||+++||||+|+|+++|+||+|+++++++.| .++ ++++++|..+|||++.+.+..++ |.||+++|++
T Consensus 130 mdl~~FPfD~Q~C~l~f~S~~y~~~~i~l~~~~~~---------~~~~~~~~~~~eW~l~~~~~~~~---y~~~~~~y~~ 197 (370)
T 2bg9_B 130 IKVMYFPFDWQNCTMVFKSYTYDTSEVILQHALDA---------MINQDAFTENGQWSIEHKPSRKN---WRSDDPSYED 197 (370)
T ss_dssp CTTCSSSTTCCCCEEEEEESSCCBTSCEEECSCCC---------CCSTTSCCTTCSSEECCCCEEEC---CCTTSSSBCC
T ss_pred CcccCCCCCceeeeEEEEeccccccEEEEEeccCC---------ccccccccccceEEEeccceEEe---ecCCCCCccE
Confidence 9999999999999999999999999999998 332 46788999999999999887665 8889999999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLS 240 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~ 240 (488)
+++++++||+++||++++++||+++++++|++||+|++++||+++++|++|++++|
T Consensus 198 l~~~~~l~R~~~~y~~~~~iP~~liv~ls~~sFwlp~~~~~Rv~lgit~lLt~t~~------------------------ 253 (370)
T 2bg9_B 198 VTFYLIIQRKPLFYIVYTIVPCILISILAILVFYLPPDAGEKMSLSISALLALTVF------------------------ 253 (370)
T ss_dssp EEEECCEECCCCSSHHHHHHHHHHHHHHHHHHHHSTTTCTTHHHHHHHHHHHHHHH------------------------
T ss_pred EEEEEEEEEcccceeeeecchHHHHHHHHhheEEccCCCCceEEEEehHHHHHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred hceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCcc
Q psy7197 241 LTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQYD 320 (488)
Q Consensus 241 ~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~~ 320 (488)
+..+.+.+|++|.++|+|++|+.+||+++++|++++++++|+|+|++.+|+
T Consensus 254 ----~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~~v~v~~~~~r~~~~~~------------------------- 304 (370)
T 2bg9_B 254 ----LLLLADKVPETSLSVPIIISYLMFIMILVAFSVILSVVVLNLHHRSPNTHE------------------------- 304 (370)
T ss_dssp ----HHHHHHHHHHHHTTSCCCSHHHHHHHHHHHHHHHHHHHHHHHHHTCTTTCC-------------------------
T ss_pred ----HHHHHhhCCCccccccHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCc-------------------------
Confidence 777888888888789999999999999999999999999999998877764
Q ss_pred CCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeecccccc
Q psy7197 321 RNKRDMDPSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIADHTKT 400 (488)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~~~~ 400 (488)
+++++++|++++++
T Consensus 305 ------------------------------------------------------------------~~~~~~~i~~~~~~ 318 (370)
T 2bg9_B 305 ------------------------------------------------------------------AVEAIKYIAEQLES 318 (370)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------chhhHHHHHHHHHh
Confidence 11224456777777
Q ss_pred cccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCCccc
Q psy7197 401 AVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDRVPI 468 (488)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~~~~ 468 (488)
++++++.++ ||++ +|+|+||+|||+|++++++||++||++||+.++++.|+
T Consensus 319 ~~~~~~~~~---------~W~~--------~a~v~Dr~~~~~f~~~~~~~t~~i~~~~~~~~~~~~~~ 369 (370)
T 2bg9_B 319 ASEFDDLKK---------DWQY--------VAMVADRLFLYIFITMCSIGTFSIFLDASHNVPPDNPF 369 (370)
T ss_dssp HHHHHHHHH---------HHHS--------CSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSGGGCCC
T ss_pred hhHHhhhHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCC
Confidence 777777888 9999 99999999999999999999999999999999988875
No 6
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=3.1e-71 Score=571.49 Aligned_cols=316 Identities=38% Similarity=0.693 Sum_probs=290.0
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|||++.++++.++||+||++++|+++++++....+++.|++||+|.|.+|++++++|+
T Consensus 52 ~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~~~~IW~PDi~~~N~~~~~~~~~~~~~~~i~~~G~V~~~~~~~~~~~C~ 131 (369)
T 2bg9_C 52 LTTNVWMDHAWYDHRLTWNASEYSDISILRLRPELIWIPDIVLQNNNDGQYNVAYFCNVLVRPNGYVTWLPPAIFRSSCP 131 (369)
T ss_dssp EEEEEEEEEEEECTTTCCCCCCCCTCSCEEECGGGSCCCCEEETTTCSSCCBSSSSCCEEECSSSEEEECCEEEEEECCS
T ss_pred eEEEEEEeeeeECCCcccCccccCCeeEEEecHHhccCCcEeccccccccccccccccEEEECCccEEEecCEEEEEECc
Confidence 46789999999999999999999999999999999999999999999988775545689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccc-cccCCCCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKF-YTCCDEPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~-y~~~~~~ys~ 160 (488)
||+++||||+|+|+++|+||+|+++++++.| +.+.++|..++||++.+.+..++... |.||+++|++
T Consensus 132 mdl~~FPfD~Q~C~l~f~S~~y~~~~i~l~~------------~~~~~~~~~~~ew~l~~~~~~~~~~~~y~~~~~~y~~ 199 (369)
T 2bg9_C 132 INVLYFPFDWQNCSLKFTALNYNANEISMDL------------IIDPEAFTENGEWEIIHKPAKKNIYGDKFPNGTNYQD 199 (369)
T ss_dssp CGGGSSSTTCCEEEEEEEESSCCTTTCEEEC------------CCGGGSCCTTSSEEEEECCEEEEECCCSSCSSCCCEE
T ss_pred CcccCCCCCceEeeEEEEEecccCceEEEEE------------ecccccceeCCEEEEeeeeEEEEEEecCCCCCCCccE
Confidence 9999999999999999999999999999987 14567888999999999988888777 8999999999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLS 240 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~ 240 (488)
+++++++||+++||++++++||+++++++|++||+|++++||+++|+|++|++++|
T Consensus 200 l~~~~~l~R~~~~y~~~~~iP~~liv~ls~~sF~lp~~~~~Rv~lgit~lLt~t~~------------------------ 255 (369)
T 2bg9_C 200 VTFYLIIRRKPLFYVINFITPCVLISFLAALAFYLPAESGEKMSTAICVLLAQAVF------------------------ 255 (369)
T ss_dssp EEEEEEEEECCSSHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHH------------------------
T ss_pred EEEEEEEEEccceeEEEEcchHHHHHHHHhheEEecCCCCCeEEEEhHHHHHHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred hceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCcc
Q psy7197 241 LTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQYD 320 (488)
Q Consensus 241 ~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~~ 320 (488)
++.+.+.+|++|.++|+|++|+.+||+++++|++++++++|+|||++.+|+
T Consensus 256 ----~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~~v~v~~~~~r~~~~~~------------------------- 306 (369)
T 2bg9_C 256 ----LLLTSQRLPETALAVPLIGKYLMFIMSLVTGVVVNCGIVLNFHFRTPSTHS------------------------- 306 (369)
T ss_dssp ----HHHHHHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTTCC-------------------------
T ss_pred ----HHHHHHhCCCCccCccHHHHHHHHHHHHHHHHHHHHhheeeeeccCCCCCc-------------------------
Confidence 777888888888779999999999999999999999999999999887764
Q ss_pred CCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeecccccc
Q psy7197 321 RNKRDMDPSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIADHTKT 400 (488)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~~~~ 400 (488)
+++++++|++++++
T Consensus 307 ------------------------------------------------------------------~~~~~~~i~~~~~~ 320 (369)
T 2bg9_C 307 ------------------------------------------------------------------GIDSTNYIVKQIKE 320 (369)
T ss_dssp ------------------------------------------------------------------HHHHHHHHHHHHHH
T ss_pred ------------------------------------------------------------------cccchhHHHHHHHH
Confidence 01123456677777
Q ss_pred cccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCC
Q psy7197 401 AVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDR 465 (488)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~ 465 (488)
++++++.++ ||++ +|+|+||+|||+|++++++||++||++||+.++++
T Consensus 321 ~~~~~~~~~---------~W~~--------~a~vlDr~~~~~f~~~~~~~~~~i~~~~~~~~~~~ 368 (369)
T 2bg9_C 321 KNAYDEEVG---------NWNL--------VGQTIDRLSMFIITPVMVLGTIFIFVMGNFNRPPA 368 (369)
T ss_dssp HHHHHHHHH---------HHHH--------CCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred HHHHHhhHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 777777888 9999 99999999999999999999999999999998765
No 7
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=6.5e-71 Score=569.43 Aligned_cols=319 Identities=38% Similarity=0.736 Sum_probs=289.9
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....+++.|++||+|.|.+|++++++|+
T Consensus 49 ~~~~~~l~~~W~D~rL~w~~~~~~~i~~l~v~~~~IW~PDi~~~N~~~~~~~~~~~~~~~v~~~G~V~~~~~~~~~~~C~ 128 (370)
T 2bg9_E 49 LTTNVWIEIQWNDYRLSWNTSEYEGIDLVRIPSELLWLPDVVLENNVDGQFEVAYYANVLVYNDGSMYWLPPAIYRSTCP 128 (370)
T ss_dssp EEEEEEEEEEEECGGGCCCTTTTTTCSCBCCCGGGSCCCCEEESSSCCSCCBSSSSCCCEECSSSEEEECCEEEEEECCC
T ss_pred eeEeEEEeeEEECCCcCCChhhcCCeeEEeechhccCCCCEeeccccCCcccccccccEEEECCccEEEecCEEEEEECc
Confidence 46789999999999999999999999999999999999999999999988875555688999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccc-cccCCCCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKF-YTCCDEPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~-y~~~~~~ys~ 160 (488)
||+++||||+|+|+++|+||+|+++++++.|..+. ++++++|..++||++.+.+..++... |.||+++|++
T Consensus 129 mdl~~FPfD~Q~C~l~f~S~~y~~~~i~l~~~~~~--------~~~~~~~~~~~eW~l~~~~~~~~~~~~y~~~~~~y~~ 200 (370)
T 2bg9_E 129 IAVTYFPFDWQNCSLVFRSQTYNAHEVNLQLSAEE--------GIDPEDFTENGEWTIRHRPAKKNYNWQLTKDDIDFQE 200 (370)
T ss_dssp CSSCSSSSSCCBCCEEEEESSSCTTSCCEECCCSC--------CCGGGSCCTTSSEEEEECCCCEECCCCTTCCCSCCCE
T ss_pred ccccCCCCCeEEEEEEEEeeccccceeEEEecCCC--------cccHhhcccccEEEEecceeEEEEEecccCCCCCCcE
Confidence 99999999999999999999999999999986541 46788899999999999988887776 8999999999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCC-CCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSD-SGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILL 239 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~-s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~ 239 (488)
+++++++||+++||++++++||+++++++|++||+|++ ++||+++|+|++|++++|
T Consensus 201 l~~~~~l~R~~~~y~~~~~iP~~liv~ls~~sFwlp~~a~~~Rv~lgit~lLt~t~~----------------------- 257 (370)
T 2bg9_E 201 IIFFLIIQRKPLFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIF----------------------- 257 (370)
T ss_dssp EEECCEEEECCCSSHHHHHHHHHHHHHHHHHHHHHHHHSCGGGHHHHHHHHHHHHHH-----------------------
T ss_pred EEEEEEEEEccCceeEEEehhHHHHHHHHHHeEEeccccCcceeEEeeeHHHHHHHH-----------------------
Confidence 99999999999999999999999999999999999999 699999999999999999
Q ss_pred hhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCc
Q psy7197 240 SLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQY 319 (488)
Q Consensus 240 ~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~ 319 (488)
+..+.+.+|++|.++|+|++|+.+||+++++|++++++|+|+|||++.+|+
T Consensus 258 -----~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~~v~v~~~~~r~~~~~~------------------------ 308 (370)
T 2bg9_E 258 -----LFLIAQKVPETSLNVPLIGKYLIFVMFVSLVIVTNCVIVLNVSLRTPNTHS------------------------ 308 (370)
T ss_dssp -----HHHHHHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHHHHHHHHTTCSTTTCC------------------------
T ss_pred -----HHHHHHhCCCccCCCChHHHHHHHHHHHHHHHHHHHhhheeeeccCCCCCc------------------------
Confidence 777888888888779999999999999999999999999999998877764
Q ss_pred cCCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeeccccc
Q psy7197 320 DRNKRDMDPSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIADHTK 399 (488)
Q Consensus 320 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~~~ 399 (488)
+++++++|+++++
T Consensus 309 -------------------------------------------------------------------~~~~~~~i~~~~~ 321 (370)
T 2bg9_E 309 -------------------------------------------------------------------CVEACNFIAKSTK 321 (370)
T ss_dssp -------------------------------------------------------------------HHHHHHHHHHHHH
T ss_pred -------------------------------------------------------------------chhhhhhhHHHHH
Confidence 1112345666677
Q ss_pred ccccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccC
Q psy7197 400 TAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDD 464 (488)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~ 464 (488)
++++.++.++ ||++ +|+|+||+|||+|.+++++||++||++||+.+++
T Consensus 322 ~~~~~~~~~~---------~W~~--------~a~vlDr~~~~~f~~~~~~~t~~i~~~~~~~~~~ 369 (370)
T 2bg9_E 322 EQNDSGSENE---------NWVL--------IGKVIDKACFWIALLLFSLGTLAIFLTGHLNQVP 369 (370)
T ss_dssp HHHHHHHHHH---------HHHH--------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred hhhHHHHHHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCC
Confidence 7766777778 9999 9999999999999999999999999999988763
No 8
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=100.00 E-value=1.5e-69 Score=559.37 Aligned_cols=311 Identities=50% Similarity=0.956 Sum_probs=284.8
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|+++++++....++++|++||+|.|.+|++++++|+
T Consensus 50 ~~~~~~l~~~W~D~rL~w~p~~~~~i~~l~v~~~~IW~PDi~~~N~~~~~~~~~~~~~~~i~~~G~V~~~~~~~~~~~C~ 129 (370)
T 2bg9_A 50 VETNVRLRQQWIDVRLRWNPADYGGIKKIRLPSDDVWLPDLVLYNNADGDFAIVHMTKLLLDYTGKIMWTPPAIFKSYCE 129 (370)
T ss_dssp EEEEEEEEEEECCTTSCCCTTTHHHHSSEEEEGGGSCCCCEEETTCCCSCEESCSSCEEEECSSCCEEECCEEEEEEECC
T ss_pred eEEEEEEeeeeECCCccCChhhcCCccEEEechhhccCCcEeccccccccccccccceEEEECCeeEEEecceEEEEECC
Confidence 46789999999999999999999999999999999999999999999998875545689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCC-CCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCD-EPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~-~~ys~ 160 (488)
||+++||||+|+|+++|+||+|+++++++.+..+ +.++++|..++||++.+.+..++...|.||+ ++|++
T Consensus 130 mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~---------~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~~y~~ 200 (370)
T 2bg9_A 130 IIVTHFPFDQQNCTMKLGIWTYDGTKVSISPESD---------RPDLSTFMESGEWVMKDYRGWKHWVYYTCCPDTPYLD 200 (370)
T ss_dssp CCTTSSSSSCEEEEEEEEESSCCTTTEEEECCCC---------CCSTTSCCTTCSSEEEEEEEEEEECCCSSSSSCCCEE
T ss_pred CCcCCCCCCcceeeEEEEEecccCcEEEEEecCC---------CcccccccccceEEEEcceEEEEEEecCCCCCCCeeE
Confidence 9999999999999999999999999999988654 4678889999999999998888888899887 68999
Q ss_pred eEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhh
Q psy7197 161 ITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLS 240 (488)
Q Consensus 161 i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~ 240 (488)
+++++++||+++||++++++||+++++++|++||+|++++||+++++|++|++++|
T Consensus 201 l~~~~~l~R~~~~y~~~~~iP~~liv~ls~~sF~lp~~~~~Rv~lgit~lLt~t~~------------------------ 256 (370)
T 2bg9_A 201 ITYHFIMQRIPLYFVVNVIIPCLLFSFLTVLVFYLPTDSGEKMTLSISVLLSLTVF------------------------ 256 (370)
T ss_dssp EEEEEEEECCCTHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH------------------------
T ss_pred EEEEEEEEEccchhhhhhhhHHHHHHHHHHHheecCCCCCCeEEEeHHHHHHHHHH------------------------
Confidence 99999999999999999999999999999999999999999999999999999999
Q ss_pred hceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCcc
Q psy7197 241 LTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQYD 320 (488)
Q Consensus 241 ~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~~ 320 (488)
+..+.+.+|++|..+|+|++|+.+||+++++|++++++|+|+|+|++.+|
T Consensus 257 ----~~~~~~~lP~~S~~vp~i~~~~~~~~~~v~~sl~~~~~v~~~~~r~~~~~-------------------------- 306 (370)
T 2bg9_A 257 ----LLVIVELIPSTSSAVPLIGKYMLFTMIFVISSIIVTVVVINTHHRSPSTH-------------------------- 306 (370)
T ss_dssp ----HHHHHHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHHHHHHHHHCSTTTC--------------------------
T ss_pred ----HHHHHhhCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhccCcccc--------------------------
Confidence 77788888888877999999999999999999999999999999877665
Q ss_pred CCCCCCCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeecccccc
Q psy7197 321 RNKRDMDPSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIADHTKT 400 (488)
Q Consensus 321 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~~~~ 400 (488)
++++++++|++++++
T Consensus 307 -----------------------------------------------------------------~~~~~~~~i~~~~~~ 321 (370)
T 2bg9_A 307 -----------------------------------------------------------------SAIEGVKYIAEHMKS 321 (370)
T ss_dssp -----------------------------------------------------------------CHHHHHHHHHHHHHH
T ss_pred -----------------------------------------------------------------hHHHHHHHHHHHHHH
Confidence 011234667777888
Q ss_pred cccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEe
Q psy7197 401 AVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQ 457 (488)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~ 457 (488)
+++.++.++ ||++ +|+|+||+|||+|.+++++||++||++
T Consensus 322 ~~~~~~~~~---------~W~~--------~a~vlDr~~~~~f~~~~~~~t~~i~~~ 361 (370)
T 2bg9_A 322 DEESSNAAE---------EWKY--------VAMVIDHILLCVFMLICIIGTVSVFAG 361 (370)
T ss_dssp HHHHHHHHH---------HTTS--------CSSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 777788888 9999 999999999999999999999999975
No 9
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=100.00 E-value=4.3e-59 Score=472.59 Aligned_cols=263 Identities=20% Similarity=0.313 Sum_probs=244.3
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
+++++|++|+|+|+||+|||++|+ ++.+.++.++||+||++++|+++++ .....+++|++||+|.|.+|++++++|+
T Consensus 41 ~t~~~~l~~~W~D~rL~w~~~~~~-i~~~~~~~~~IW~PDi~l~N~~~~~--~~~~~~~~v~~~G~V~~~~~~~~~~~C~ 117 (321)
T 3tlw_A 41 FKVNAFLSLSWKDRRLAFDPVRSG-VRVKTYEPEAIWIPEIRFVNVENAR--DADVVDISVSPDGTVQYLERFSARVLSP 117 (321)
T ss_dssp EEEEEEEEEEEECGGGCCCSTTTC-CSSEECCGGGSCCCCEEESSBSSCC--EEEEEEEEECTTCEEEEEEEEEEEEECC
T ss_pred EEEEEEEeeEEECcccCCCCccCC-eeeecccccCeEcCcEEeecccccc--cccceeEEEeCCccEEEecceEEEEEEE
Confidence 568899999999999999999998 9999999999999999999999987 4445689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDI 161 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~i 161 (488)
||+++||||+|+|+++|+||+|+++++++.|..+ ..+.+++..++||++.+....++...|.|++++|+++
T Consensus 118 ~dl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~---------~~~~~~~~~~~ew~l~~~~~~~~~~~~~~~~~~y~~l 188 (321)
T 3tlw_A 118 LDFRRYPFDSQTLHIYLIVRSVDTRNIVLAVDLE---------KVGKNDDVFLTGWDIESFTAVVKPANFALEDRLESKL 188 (321)
T ss_dssp CCCTTTTSCEEEEEEEEEEECCSSCCEEEEECGG---------GCEECTTCCBTTEEEEEEEEEEEEEEEEETTEEEEEE
T ss_pred eecccCCCCceeEeEEEecccCChhhEEEEEcCC---------cccccccccccceEEEeeEeEEeeEEecCCCCceeEE
Confidence 9999999999999999999999999999998754 2455678899999999998888777888899999999
Q ss_pred EEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhh
Q psy7197 162 TFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSL 241 (488)
Q Consensus 162 ~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~ 241 (488)
++++++||+++||++++++||+++++++|++|| |++++||+++++|++|++++|
T Consensus 189 ~~~~~l~R~~~~y~~~~~iP~~li~~ls~~sF~-p~~~~~Rv~l~it~lL~~t~~------------------------- 242 (321)
T 3tlw_A 189 DYQLRISRQYFSYIPNIILPMLFILFISWTAFW-STSYEANVTLVVSTLIAHIAF------------------------- 242 (321)
T ss_dssp EEEEEEEECCTTHHHHTHHHHHHHHHHHGGGGG-CCCHHHHHHHHHHHHHHHHHH-------------------------
T ss_pred EEEEEEEEeeceeehhHHHHHHHHHHHhheeec-cCCCCCcEEEEhhHHHHHHHH-------------------------
Confidence 999999999999999999999999999999999 888899999999999999999
Q ss_pred ceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCccc--ccchhhhhHHhh
Q psy7197 242 TVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTH--VMSPWVKKVFIH 306 (488)
Q Consensus 242 ~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~--~~p~w~r~~~l~ 306 (488)
++.+.+.+|++|. +|+|++|+.+||+++++|++++++|.++|+|+++.+ ++|+|+|++|--
T Consensus 243 ---~~~~~~~lP~~s~-vp~i~~~~~~~~~~v~~sll~~v~v~~l~~~~~~~~a~~~p~w~r~~fp~ 305 (321)
T 3tlw_A 243 ---NILVETCLPKTPY-MTYTGAIIFMIYLFYFVAVIEVTVQHYLKVESQPARAASITRASRIAFPV 305 (321)
T ss_dssp ---HHHHCCCCCCCSS-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHhhCCCccc-cHHHHHHHHHHHHHHHHHHHHHHhhhhhhcCCccccccccChhheeeehH
Confidence 7778888888875 899999999999999999999999999999998875 899999998864
No 10
>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*
Probab=100.00 E-value=1.4e-57 Score=461.60 Aligned_cols=265 Identities=16% Similarity=0.219 Sum_probs=238.4
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEE--------eeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCC
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEML--------HVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPP 73 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i--------~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~ 73 (488)
+++++|++|+|+|+||+|+ |++.+ ++|.++||+||++++|++++.+ .....++|++||+|.|.+|
T Consensus 33 ~t~~~~l~~~W~D~rL~~~-----~~~~l~l~~~~~~~ip~~~IW~Pdi~l~N~~~~~~--~~~~~~~i~~~G~V~~~~~ 105 (322)
T 3rqw_A 33 YKVDGYIVAQWTGKPRKTP-----GDKPLIVENTQIERWINNGLWVPALEFINVVGSPD--TGNKRLMLFPDGRVIYNAR 105 (322)
T ss_dssp EEEEEEEEEEEECSCCCCS-----TTSCEEEETHHHHHHHHTTCCCCCEEETTBSSCCE--EEEEEEEECTTSEEEEEEE
T ss_pred EEEEEEEeeEEechhhCCC-----CCCceeecchhhcccccccccCCcEEEEcccCccc--ccceeEEEeCCcCEEEeec
Confidence 5688999999999999984 55665 4568999999999999999988 4557899999999999999
Q ss_pred eeeeccceeeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeee-Eeecee------e
Q psy7197 74 AIYKSSCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDI-LEVPAV------R 146 (488)
Q Consensus 74 ~~~~~~C~~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l-~~~~~~------~ 146 (488)
++++++|+||+++||||+|+|+++|+||+|+++++++.|.++.. ..+.++ .++||++ .+.... +
T Consensus 106 ~~~~~~C~~dl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~~~-------~~~~~~--~~~ew~l~~~~~~~~~~~~y~ 176 (322)
T 3rqw_A 106 FLGSFSNDMDFRLFPFDRQQFVLELEPFSYNNQQLRFSDIQVYT-------ENIDNE--EIDEWWIRGKASTHISDIRYD 176 (322)
T ss_dssp EEEEEECCCCCTTTTSCEEEEEEEEEESSCSSEEEEEEEEECCS-------CSSSSC--SSSSEEECCSCEECCEEEECT
T ss_pred eeEEEeccccccCCCCCCcEEEEEEEEcccCcceEEEEECCCcc-------cccCCC--CCCceEEEeeeEEEeeccccc
Confidence 99999999999999999999999999999999999999864310 022233 6799999 988877 6
Q ss_pred cccccccCCCCeeeeEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCC
Q psy7197 147 NEKFYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPP 226 (488)
Q Consensus 147 ~~~~y~~~~~~ys~i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~ 226 (488)
+...|.||+++|+++++++++||+++||++++++||+++++++|++||+| +++||+++++|++|++++|
T Consensus 177 ~~~~~~~~~~~y~~l~~~~~l~R~~~~y~~~~~iP~~li~~ls~~sF~lp-~~~~Rv~l~it~lL~~~~~---------- 245 (322)
T 3rqw_A 177 HLSSVQPNQNEFSRITVRIDAVRNPSYYLWSFILPLGLIIAASWSVFWLE-SFSERLQTSFTLMLTVVAY---------- 245 (322)
T ss_dssp TSCCSSSSCCEEEEEEEEEEEEECCHHHHHHTHHHHHHHHHHHHGGGGCS-SHHHHHHHHHHHHHHHHHH----------
T ss_pred eeeeccCCCCCeEEEEEEEEEEEeeeeeeehHHHHHHHHHHHHHHHhccC-CCCCcEEEEEehHHHHHHH----------
Confidence 66778888999999999999999999999999999999999999999999 8899999999999999999
Q ss_pred CcccchhhhhhhhhhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhh
Q psy7197 227 TSLVVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIH 306 (488)
Q Consensus 227 vsY~t~lD~~~~~~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~ 306 (488)
+..+.+.+|++| .+|+|++|+.+||+++++|+++++++.++|||++.+|+||+|+|++|+.
T Consensus 246 ------------------~~~~~~~lP~~s-~vp~i~~~~~~~~~~v~~sll~~~~v~~l~~~~~~~~~~p~w~r~~fl~ 306 (322)
T 3rqw_A 246 ------------------AFYTSNILPRLP-YTTVIDQMIIAGYGSIFAAILLIIFAHHRQANGVEDDLLIQRCRLAFPL 306 (322)
T ss_dssp ------------------HHHHHHHSCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSCCCHHHHTCTTHHHH
T ss_pred ------------------HHHHhhhCCCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCccccCcchHHHHHHHH
Confidence 777888888888 4999999999999999999999999999999999999999999999999
Q ss_pred hcccee
Q psy7197 307 LLPKLL 312 (488)
Q Consensus 307 ~l~~~l 312 (488)
.+..+.
T Consensus 307 ~~~~~~ 312 (322)
T 3rqw_A 307 GFLAIG 312 (322)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 886544
No 11
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=100.00 E-value=2e-57 Score=465.13 Aligned_cols=276 Identities=18% Similarity=0.309 Sum_probs=240.1
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEee-CCCccccccEEEEecCCCceEEEEEe--eeeeeeeeeEEecCCeeeec
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHV-PSDHIWRPDIVLYNNADGNFEVTLAT--KATLNYTGRVEWKPPAIYKS 78 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l-~~~~IW~Pdi~l~N~~~~~~~~~~~~--~v~V~~~G~V~~~~~~~~~~ 78 (488)
|++++|++|+|+|+||+|||++|+|++.+.+ +.++||+||++++|++++.++....+ .++|++||+|.|.+|+++++
T Consensus 49 ~t~~~~l~~~W~D~rL~w~p~~~~~~~~l~~~~~~~IW~PDi~l~N~~~~~~~~~~~~n~~v~i~~~G~V~~~~~~~~~s 128 (347)
T 3rhw_A 49 YSAQLTLRESWIDKRLSYGVKGDGQPDFVILTVGHQIWMPDTFFPNEKQAYKHTIDKPNVLIRIHNDGTVLYSVRISLVL 128 (347)
T ss_dssp EEEEEEEEEEEECGGGCSSTTCSSSCSEEECCTTCCCCCCCEECTTEEEEEECCSSSCSEEEEEETTSEEEEEEEEEEEE
T ss_pred EEEEEEEeeEEECcccCCCCccCCCceEEEecchhceecCCEeeeccccccccccccccEEEEEeCCCCEEEecceEEEE
Confidence 4678999999999999999999999999886 78999999999999988776543222 36789999999999999999
Q ss_pred cceeeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccc--cccceeeeeEeeceeecccccccCCC
Q psy7197 79 SCEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTA--FYTSVEWDILEVPAVRNEKFYTCCDE 156 (488)
Q Consensus 79 ~C~~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~--~~~~~eW~l~~~~~~~~~~~y~~~~~ 156 (488)
+|+||+++||||+|+|+++|+||+|+++++++.|..+. ..+.++ ....+||++.+.........+ ..+
T Consensus 129 ~C~~dl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~~--------~~~~~~~~~~~~~e~~l~~~~~~~~~~~~--~~~ 198 (347)
T 3rhw_A 129 SCPMYLQYYPMDVQQCSIDLASYAYTTKDIEYLWKEHS--------PLQLKVGLSSSLPSFQLTNTSTTYCTSVT--NTG 198 (347)
T ss_dssp ECCCCCTTGGGCEEEEEEEEEESSCCTTTEEEEECSSC--------SEEECTTSGGGCCSEEEEEEEEEECCEEC--SSC
T ss_pred EeeeeeccCCCcceeEEEEeccCcCChhhEEEEecCCC--------ceeecCcceeEccceEEeeEEeeEeeeee--ccc
Confidence 99999999999999999999999999999999986541 122222 456789999988765544333 357
Q ss_pred CeeeeEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCC-CCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhh
Q psy7197 157 PYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDS-GEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSI 235 (488)
Q Consensus 157 ~ys~i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s-~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~ 235 (488)
.|+++++++++||+++||++++++||+++++++|++||+|+++ |||+++|+|++|++++|
T Consensus 199 ~y~~l~~~~~l~R~~~~y~~~l~iP~~li~~ls~~sF~lp~~~~~~Rv~lgit~lLt~tv~------------------- 259 (347)
T 3rhw_A 199 IYSCLRTTIQLKREFSFYLLQLYIPSCMLVIVSWVSFWFDRTAIPARVTLGVTTLLTMTAQ------------------- 259 (347)
T ss_dssp EECEEEEEEEEEECSHHHHHHTHHHHHHHHHHHHTTTTSCTTCHHHHHHHHHHHHHHHHHH-------------------
T ss_pred ceeEEEEEEEEEEEeeEEEEEeehhHHHHHHHhheEEeccCCCCcceEEEEeehHHHHHHH-------------------
Confidence 8999999999999999999999999999999999999999999 89999999999999999
Q ss_pred hhhhhhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcc-cccchhhhhHHhhhccceecc
Q psy7197 236 SILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQT-HVMSPWVKKVFIHLLPKLLVM 314 (488)
Q Consensus 236 ~~~~~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~-~~~p~w~r~~~l~~l~~~l~~ 314 (488)
++.+++.+|++| .+|+|+.|+.+||+++++|++++++|.+++++++.+ +++|+|++++++..+|.++++
T Consensus 260 ---------~~~~~~~lP~~S-~v~~id~~~~~~~~~v~~slle~~~v~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~i 329 (347)
T 3rhw_A 260 ---------SAGINSQLPPVS-YIKAIDVWIGACMTFIFCALLEFALVNHIANAGTTEWNDISKRVDLISRALFPVLFFV 329 (347)
T ss_dssp ---------HHHHHHTSCCCS-SCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---------HHHHHhhCCCcc-ceeHHHHHHHHHHHHHHHHHHHHHHHHHHhccCcchhhhhhHHHHHHHHHHHHHHHHH
Confidence 666777777776 478888889999999999999999999998887755 689999999999999999887
Q ss_pred cC
Q psy7197 315 RR 316 (488)
Q Consensus 315 ~~ 316 (488)
-.
T Consensus 330 ~n 331 (347)
T 3rhw_A 330 FN 331 (347)
T ss_dssp HH
T ss_pred HH
Confidence 54
No 12
>1oed_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 2k58_B
Probab=100.00 E-value=4.1e-48 Score=375.24 Aligned_cols=242 Identities=40% Similarity=0.685 Sum_probs=122.7
Q ss_pred eeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhhceeeeeEEe
Q psy7197 171 TLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSLTVFFLLLAE 250 (488)
Q Consensus 171 ~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~~~ill~l~e 250 (488)
|+||++|+++||+++++++|++||+|+|+|||+++++|++|++++| ++.++|
T Consensus 1 pl~Y~~nliiP~~li~~ls~~~F~Lp~dsgerv~l~it~lLs~tvf----------------------------l~~v~~ 52 (250)
T 1oed_B 1 PLFYIVYTIIPCILISILAILVFYLPPDAGEKMSLSISALLAVTVF----------------------------LLLLAD 52 (250)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH----------------------------HHHHHH
T ss_pred CeEEEEhHHHHHHHHHHHHHHHheeCCCCCCeEEehhhHHHHHHHH----------------------------HHHHHH
Confidence 5799999999999999999999999999999999999999999999 999999
Q ss_pred ecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCccCCCC-CCCcc
Q psy7197 251 IIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQYDRNKR-DMDPS 329 (488)
Q Consensus 251 ~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~~~~~~-~~~~~ 329 (488)
.+|++|+.+|+||+|+.+||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|||++|+++..+. .. .
T Consensus 53 ~lP~tS~~vPli~~y~~~~m~~v~~sl~~tv~Vln~~~r~~~~~~mp~wvr~~~l~~l~~~l~m~~p~~~~~~~~~~-~- 130 (250)
T 1oed_B 53 KVPETSLSVPIIIRYLMFIMILVAFSVILSVVVLNLHHRSPNTHTMPNWIRQIFIETLPPFLWIQRPVTTPSPDSKP-T- 130 (250)
T ss_dssp HHHHHHHHSCCCCTTHHHHHHHHHHHHHHHHHHHHHHHTC----------------------------------------
T ss_pred HCCCCcccCCcHHHHHHHHHHHHHHHHHHHhheeeeeccCCCCCCcchHHHHHHHHhhhHHhEecCCCccccccccc-c-
Confidence 99999999999999999999999999999999999999999999999999999999999999999997532211 00 0
Q ss_pred ccccccccCC-CCCCCCCCC--CCC-CCCCCCCCCCCCCCCCCCCCCccCCC--CCCChhhhhhccceeeeccccccccc
Q psy7197 330 QHQSTCKVHG-TPTRPPGDL--PLD-DIESEPLDPLPPPIPPLPPMKKVSHH--WHLCPELHKAIAGVRFIADHTKTAVN 403 (488)
Q Consensus 330 ~~~~~~~~~~-~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~l~~~~~~v~~I~~~~~~~~~ 403 (488)
.+... ..+ ..++..... +.+ +++. .+ .+.............. ...+++++++++++++|++|++++++
T Consensus 131 -~~~~~-~~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~Ia~~~~~~d~ 204 (250)
T 1oed_B 131 -IISRA-NDEYFIRKPAGDFVCPVDNARVA--VQ--PERLFSEMKWHLNGLTQPVTLPQDLKEAVEAIKYIAEQLESASE 204 (250)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -ccccc-cchhcccCCccccCCCCCccccc--cc--cCCCCccccccccccccccccCHHHHHHHHHHHHHHHHHHhhhH
Confidence 00000 000 000000000 000 0000 00 0000000000000010 23457899999999999999999999
Q ss_pred ccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCC
Q psy7197 404 DTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDR 465 (488)
Q Consensus 404 ~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~ 465 (488)
++++++ |||| ||||+||+|||+|++++++||++||++||+++++.
T Consensus 205 ~~~~~~---------dWk~--------vAmVlDRlfL~iF~i~~i~gT~~I~l~ap~~~~~~ 249 (250)
T 1oed_B 205 FDDLKK---------DWQY--------VAMVADRLFLYVFFVICSIGTFSIFLDASHNVPPD 249 (250)
T ss_dssp ----------------------------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTT
T ss_pred HHHHHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCC
Confidence 999999 9999 99999999999999999999999999999998865
No 13
>1oed_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1a11_A 1cek_A 1eq8_A
Probab=100.00 E-value=9.1e-48 Score=374.89 Aligned_cols=248 Identities=32% Similarity=0.521 Sum_probs=122.6
Q ss_pred eeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhhceeeeeEEe
Q psy7197 171 TLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSLTVFFLLLAE 250 (488)
Q Consensus 171 ~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~~~ill~l~e 250 (488)
|+||++|+++||++++++++++||+|+|+|||+++++|++|++++| ++.++|
T Consensus 1 pl~Y~~nliiP~~li~~ls~~~F~Lp~~~gekv~l~it~lLs~tvf----------------------------l~~~~~ 52 (260)
T 1oed_C 1 PLFYVINFITPCVLISFLASLAFYLPAESGEKMSTAISVLLAQAVF----------------------------LLLTSQ 52 (260)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHCTTCHHHHHHHHHHHHHH----------------------------HHHHHH
T ss_pred CeEEEEhHHHHHHHHHHHHHHHeeeCCCCCCeEeehHHHHHHHHHH----------------------------HHHHHH
Confidence 5799999999999999999999999999999999999999999999 999999
Q ss_pred ecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceecccCCCccCCC--CCC-C
Q psy7197 251 IIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMRRPQYDRNK--RDM-D 327 (488)
Q Consensus 251 ~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~~p~~~~~~--~~~-~ 327 (488)
.+|++|+.+|+||+|+.++|+++++|+++|++|+|+|||++.+|+||+|+|++|++++|++|||++|+++... ... .
T Consensus 53 ~lP~tS~~vPli~~y~~~~m~~v~~s~~~tv~vl~~~~r~~~~~~mp~w~r~~~l~~l~~~l~m~~p~~~~~~~~~~~~~ 132 (260)
T 1oed_C 53 RLPETALAVPLIGKYLMFIMSLVTGVIVNCGIVLNFHFRTPSTHVLSTRVKQIFLEKLPRILHMSRADESEQPDWQNDLK 132 (260)
T ss_dssp HHHHHHHHSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHC----------------------------------------
T ss_pred HCCCCcccchhHHHHHHHHHHHHHHHHHHHHheeeeeccCCCCCCccHHHHHHHHHhhhHHhEecCCccccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999999999999764110 000 0
Q ss_pred cccccc---ccccC-CCCCCCCCCCCCCCCCCCCCCCCCCCCC----CCCCCCccCCCCCCChhhhhhccceeeeccccc
Q psy7197 328 PSQHQS---TCKVH-GTPTRPPGDLPLDDIESEPLDPLPPPIP----PLPPMKKVSHHWHLCPELHKAIAGVRFIADHTK 399 (488)
Q Consensus 328 ~~~~~~---~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~~~ 399 (488)
...... ....+ ...+++.+.....+.+. ..+ ..+... ......+.......+++++++++++++|++|++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~Ia~~~~ 210 (260)
T 1oed_C 133 LRRSSSVGYISKAQEYFNIKSRSELMFEKQSE-RHG-LVPRVTPRIGFGNNNENIAASDQLHDEIKSGIDSTNYIVKQIK 210 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ccccccccccccchhhcccccccccccccccc-CCC-cccccccCCCCCccccccccccccCHHHHHHHHHHHHHHHHHH
Confidence 000000 00000 00000000000000000 000 000000 000000000112345789999999999999999
Q ss_pred ccccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccCC
Q psy7197 400 TAVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDDR 465 (488)
Q Consensus 400 ~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~~ 465 (488)
++++++++++ |||| ||||+||+|||+|++++++||++||++||++++++
T Consensus 211 ~~d~~~~~~~---------dWk~--------vAmVlDRlfL~iF~i~~i~gT~~I~l~ap~~~~~~ 259 (260)
T 1oed_C 211 EKNAYDEEVG---------NWNL--------VGQTIDRLSMFIITPVMVLGTIFIFVMGNFNHPPA 259 (260)
T ss_dssp --------------------------------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhHHHHHHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCC
Confidence 9999999999 9999 99999999999999999999999999999998764
No 14
>1oed_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1
Probab=100.00 E-value=1.5e-47 Score=373.38 Aligned_cols=248 Identities=30% Similarity=0.509 Sum_probs=121.6
Q ss_pred eeeEEEeeeccccccceeeeEEEEccCC-CCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhhceeeeeEE
Q psy7197 171 TLFYTVNLIIPCMGISFLTILVFYLPSD-SGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSLTVFFLLLA 249 (488)
Q Consensus 171 ~~yY~~~lilP~ili~~ls~~sF~Lp~~-s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~~~ill~l~ 249 (488)
|+||++|+++||+++++++|++||+|+| +|||+++++|++|++++| ++.++
T Consensus 1 pl~Y~~nliiP~~li~~ls~~~F~Lp~~~~gerv~l~it~lLs~tvf----------------------------l~~~~ 52 (260)
T 1oed_E 1 PLFYIINIIAPCVLISSLVVLVYFLPAQAGGQKCTLSISVLLAQTIF----------------------------LFLIA 52 (260)
T ss_dssp CCSHHHHHHTHHHHHHHHHHHHHHHHHTCCTTHHHHHHHHHHHHHHH----------------------------HHHHH
T ss_pred CeEEEEhHHHHHHHHHHHHHHHeeeCCCCCCCeEEeehhHHHHHHHH----------------------------HHHHH
Confidence 5799999999999999999999999999 799999999999999999 99999
Q ss_pred eecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceeccc-CCCccCC-C-C-C
Q psy7197 250 EIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMR-RPQYDRN-K-R-D 325 (488)
Q Consensus 250 e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~-~p~~~~~-~-~-~ 325 (488)
+.+|++|+.+|+||+|+.+||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|||+ +|+++.. . . .
T Consensus 53 ~~lP~tS~~vPli~~y~~~~m~~v~~sl~~tv~vln~~~r~~~~~~mp~w~r~~~l~~l~~~l~m~~rp~~~~~~~~~~~ 132 (260)
T 1oed_E 53 QKVPETSLNVPLIGKYLIFVMFVSMLIVMNCVIVLNVSLRTPNTHSLSEKIKHLFLGFLPKYLGMQLEPSEETPEKPQPR 132 (260)
T ss_dssp HHHHHHHHHSCCCCSHHHHHHHHHHHHHHHHHHHHHHHHHC---------------------------------------
T ss_pred HhCCCCcccchhHHHHHHHHHHHHHHHHHHHhheeeeeccCCCCCCcchHHHHHHHHhhhHHhEeccCCccccccccccc
Confidence 999999999999999999999999999999999999999999999999999999999999999999 9965421 0 0 0
Q ss_pred CCccccccccccCCCCCCCCCCCCCCCCCCCCCCCCC-CC-CC-CCCC--CCccCCCCCCChhhhhhccceeeecccccc
Q psy7197 326 MDPSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLP-PP-IP-PLPP--MKKVSHHWHLCPELHKAIAGVRFIADHTKT 400 (488)
Q Consensus 326 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~-~~~~--~~~~~~~~~~~~~l~~~~~~v~~I~~~~~~ 400 (488)
............+....++.+....++.+. ..+... +. .. ...+ .+........+++++++++++++|++|+++
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~Ia~~~~~ 211 (260)
T 1oed_E 133 RRSSFGIMIKAEEYILKKPRSELMFEEQKD-RHGLKRVNKMTSDIDIGTTVDLYKDLANFAPEIKSCVEACNFIAKSTKE 211 (260)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccchhhccCcccccccccCCc-ccccccccccccCCCCcccccccccccccCHHHHHHHHHHHHHHHHHHh
Confidence 000000000000000000000000000000 000000 00 00 0000 000011123457899999999999999999
Q ss_pred cccccccccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEecCccccC
Q psy7197 401 AVNDTKVKPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDD 464 (488)
Q Consensus 401 ~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~ 464 (488)
+++++++++ |||| ||||+||+|||+|++++++||++||++||+++++
T Consensus 212 ~d~~~~~~~---------dWk~--------vAmVlDRlfL~iF~i~~i~gT~~I~l~ap~~~~~ 258 (260)
T 1oed_E 212 QNDSGSENE---------NWVL--------IGKVIDKACFWIALLLFSIGTLAIFLTGHFNQVP 258 (260)
T ss_dssp -------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccc
Confidence 999999999 9999 9999999999999999999999999999999875
No 15
>1oed_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1dxz_A 3mra_A 2k59_B
Probab=100.00 E-value=9.6e-46 Score=353.75 Aligned_cols=216 Identities=42% Similarity=0.736 Sum_probs=115.9
Q ss_pred eeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhhceeeeeEEe
Q psy7197 171 TLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSLTVFFLLLAE 250 (488)
Q Consensus 171 ~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~~~ill~l~e 250 (488)
|+||++|+++||+++++++|++||+|+|+|||+++++|++|++++| ++.++|
T Consensus 1 pl~Y~~nliiP~~li~~Ls~~~F~Lp~~sgerv~l~it~lLs~tvf----------------------------l~~v~~ 52 (227)
T 1oed_A 1 PLYFVVNVIIPCLLFSFLTGLVFYLPTDSGEKMTLSISVLLSLTVF----------------------------LLVIVE 52 (227)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHH----------------------------HHHHHH
T ss_pred CeEEEehHHHHHHHHHHHHHHHheeCCCCCCeEeehHHHHHHHHHH----------------------------HHHHHH
Confidence 5799999999999999999999999999999999999999999999 899999
Q ss_pred ecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccccchhhhhHHhhhccceeccc---CCCccCCCCCCC
Q psy7197 251 IIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVMSPWVKKVFIHLLPKLLVMR---RPQYDRNKRDMD 327 (488)
Q Consensus 251 ~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~p~w~r~~~l~~l~~~l~~~---~p~~~~~~~~~~ 327 (488)
.+|++|+.+|+||+|+.+||+++++|++++++|+|+|||++.+|+||+|+|++|++++|++|||+ ||+++.....
T Consensus 53 ~lP~tS~~vPli~~y~~~~m~~v~~sl~~tv~vln~~~r~~~~~~mp~wvr~~~l~~l~~~l~m~~~~rp~~~~~~~~-- 130 (227)
T 1oed_A 53 LIPSTSSAVPLIGKYMLFTMIFVISSIIITVVVINTHHRSPSTHTMPQWVRKIFIDTIPNVMFFSTMKRASKEKQENK-- 130 (227)
T ss_dssp HHHHHHHHSCCCTHHHHHHHHHHHHHHHHHHHHHHHHHHC----------------------------------------
T ss_pred hCCCcccccchHHHHHHHHHHHHHHHHHHHHHHHhhhccCCCCCCcchHHHHHHHHhccHhheeccccCCcccccccc--
Confidence 99999999999999999999999999999999999999999999999999999999999999996 6643211100
Q ss_pred ccccccccccCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCccCCCCCCChhhhhhccceeeeccccccccccccc
Q psy7197 328 PSQHQSTCKVHGTPTRPPGDLPLDDIESEPLDPLPPPIPPLPPMKKVSHHWHLCPELHKAIAGVRFIADHTKTAVNDTKV 407 (488)
Q Consensus 328 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~v~~I~~~~~~~~~~~~~ 407 (488)
....+. . ..+ .++. .+ + ... ........+++++++++++++|++|++++++++++
T Consensus 131 -------~~~~~~--~---~~~---~~~~-~~---~----~~~--~~~~~~~~~~~l~~~~~~v~~I~~~~~~~~~~~~~ 185 (227)
T 1oed_A 131 -------IFADDI--D---ISD---ISGK-QV---T----GEV--IFQTPLIKNPDVKSAIEGVKYIAEHMKSDEESSNA 185 (227)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred -------cccccc--c---ccc---cCCC-CC---C----CCC--CccccccccHHHHHHHHHHHHHHHHHHhhhHHHHH
Confidence 000000 0 000 0000 00 0 000 00011123468999999999999999999999999
Q ss_pred ccccccccccCCCcccCCCCCCccchhhhHHHHHHHHHHhhhcccceEEec
Q psy7197 408 KPLEVERSLCHGWDYNSPLIIPSPAMVLDRLFLWIFTLAVLIGSAGIILQA 458 (488)
Q Consensus 408 ~~~~~~~~~~~~W~~~~~~~~~~~A~V~Dr~~l~~f~~~~~~~t~~i~l~~ 458 (488)
++ |||| +|||+||+|||+|++++++||++||+++
T Consensus 186 ~~---------dWk~--------vA~VlDRl~l~iF~~~~i~gT~~i~~~~ 219 (227)
T 1oed_A 186 AE---------EWKY--------VAMVIDHILLCVFMLICIIGTVSVFAGR 219 (227)
T ss_dssp ------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HH---------HHHH--------HHHHHHHHHHHHHHHHHHHHHHHHHHhH
Confidence 99 9999 9999999999999999999999999874
No 16
>2qc1_B Acetylcholine receptor subunit alpha; nicotinic acetylcholine receptor, glycosylated protein, beta sandwich, Cys-loop, buried hydrophilic residues; HET: NAG MAN; 1.94A {Mus musculus} PDB: 1l4w_B 1ljz_B
Probab=100.00 E-value=3e-39 Score=308.22 Aligned_cols=161 Identities=50% Similarity=0.979 Sum_probs=151.1
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|.+++|++|.|+|+||+|||++|+|++.+.++.++||+||++++|++++.++.....+++|++||+|.|.+|++++++|+
T Consensus 51 ~~~~~~~~~~W~D~rL~w~~~~~~~i~~l~~~~~~iW~PDi~~~N~~~~~~~~~~~~~~~v~~~G~V~~~~~~~~~~~C~ 130 (212)
T 2qc1_B 51 VTTNVRLKQQWVDYNLKWNPDDYGGVKKIHIPSEKIWRPDVVLYNNADGDFAIVKFTKVLLDYTGHITWTPPAIFKSYCE 130 (212)
T ss_dssp EEEEEEEEEEEECTTCCCCGGGGTTCCEEEECGGGSCCCCEEECCBTTTSSCEECCCCEEEETTCEEEECCEEEEEEEEE
T ss_pred EEEEEEEeeEEECCCcccChhhcCCeeEEEcchhhccCCceeccccccccccccceeeEEEECCeeEEEEeeeEEEEEcc
Confidence 46789999999999999999999999999999999999999999999998876555789999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCC-CCeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCD-EPYLD 160 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~-~~ys~ 160 (488)
||+++||||+|+|.|+|+||+|+++++++.|..+ .+++++|..++||++.+.+..++...|.||+ ++|++
T Consensus 131 mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~---------~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~~y~~ 201 (212)
T 2qc1_B 131 IIVTHFPFDEQNCSMKLGTRTYDGSAVAINPESD---------QPDLSNFMESGEWVIKEARGWKHWVFYSCCPTTPYLD 201 (212)
T ss_dssp ECCSSSSCCEEEEEEEEEESSCCTTTEEEEESCS---------SCBCTTCCCCSSEEEEEEEEEEEEEEETTCSSCCEEE
T ss_pred ceeecCCCCceEEeEEEEcccccCceEEEEeccc---------ccchhhCccCCCEEEEEeEEEEEEEecCCCCCCCeeE
Confidence 9999999999999999999999999999998654 4678899999999999999999888899998 89999
Q ss_pred eEEEEEeeeee
Q psy7197 161 ITFNITMRRKT 171 (488)
Q Consensus 161 i~~~~~L~R~~ 171 (488)
++|+|+|||+|
T Consensus 202 i~~~~~l~R~p 212 (212)
T 2qc1_B 202 ITYHFVMQRLP 212 (212)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEEEEEECc
Confidence 99999999996
No 17
>4aoe_A Acetylcholine-binding protein type 2; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholin receptor; 5.80A {Biomphalaria glabrata}
Probab=100.00 E-value=1.7e-39 Score=307.34 Aligned_cols=155 Identities=27% Similarity=0.501 Sum_probs=142.7
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
+.+++|++|+|+|+||+||| +|+|++.++++.++||+||++++|+++.... ...+.+.|++||+|.|.+|++++++|+
T Consensus 50 ~~~~~wl~~~W~D~rL~W~~-~~~~i~~i~v~~~~IW~PDi~l~N~~~~~~~-~~~~~v~v~~~G~V~~~~~~~~~s~C~ 127 (205)
T 4aoe_A 50 VELGLWLVISWKDRSLSWSN-ECTTFNELTLPSKYIWLPHIEVYNSIGKPGI-HSDQLVRVYKDGTVTFVPQYTIRFSCA 127 (205)
T ss_dssp EEEEEEEEEEEECCCCCCSC-CCSCCCEEEEEGGGSCCCCCEETTBSSCCEE-CSCCEEEEETTSEEEECCEEEEEEECC
T ss_pred EEEEEEEEEEEECCccccCC-cCCCccEEEeCHHHhccccEEEecccccccc-ccceEEEEeCCcEEEEeCcEEEEEecc
Confidence 46789999999999999997 7999999999999999999999999876443 334578999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDI 161 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~i 161 (488)
|| .+||||+|+|.|+||||+|++.++++...+ ++++++|..||||++++.++.++...|.||+++|+++
T Consensus 128 ~d-~~fPfD~Q~C~l~fgSw~y~~~~l~l~~~~----------~~dl~~~~~n~EW~l~~~~~~r~~~~Y~CC~~~y~di 196 (205)
T 4aoe_A 128 LE-NVTTEQGAACTLKFGPWTYDVRDLVLDESQ----------QVDLTTYAGGERFQLIEAKQKVNKKTYPCCPQSFEDI 196 (205)
T ss_dssp CT-TSSSSSCEEEEEEEECSSCCTTTEEEECSS----------SCBCTTSCTTCSEEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred cC-cCCCccCCeEEEEEECccCChheEEEecCc----------ccchhccccCCcEEEEeeEEEEEEEEeCCCCCCcceE
Confidence 99 899999999999999999999999986432 4688999999999999999999999999999999999
Q ss_pred EEEEEeee
Q psy7197 162 TFNITMRR 169 (488)
Q Consensus 162 ~~~~~L~R 169 (488)
+|+|+|||
T Consensus 197 t~~i~lrR 204 (205)
T 4aoe_A 197 ELRVTFKK 204 (205)
T ss_dssp EEEEEEEE
T ss_pred EEEEEEEE
Confidence 99999999
No 18
>4aod_A Acetylcholine-binding protein type 1; ligand gated ION channel, LGI Cys-loop receptor, ACHBP, ACHR, acetylcholine receptor; 6.00A {Biomphalaria glabrata}
Probab=100.00 E-value=4.6e-39 Score=304.70 Aligned_cols=155 Identities=27% Similarity=0.485 Sum_probs=143.2
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
+.+++|++|+|+|+||+||+ +|+|++.++++.++||+||++++|++++.. ....+.+.|++||+|.|.+|++++++|+
T Consensus 50 ~t~~~wl~~~W~D~rL~W~~-~~~~i~~i~v~~~~IW~PDi~l~N~~~~~~-~~~~~~~~v~~~G~V~~~~~~~~~s~C~ 127 (205)
T 4aod_A 50 VDIGLWTTLVWKDRCLNWFN-EFTSFKELTVPIAEIWTPDIFIFDSVGAPE-IFSDKLARVSQDGTVTYVPQLKVRLSCP 127 (205)
T ss_dssp EEEEEEEEEEEECCCCCCSC-CCSCCCEEEEEGGGSCCCCEEETTBSSCCE-ECSCCEEEEETTSEEEECCEEEEEEECC
T ss_pred EEEEEEEEEEEECCceeeCC-cCCCccEeeccHHhcCcCCEEEEcccccce-eecceEEEEecCCEEEEeccEEEEEEec
Confidence 46789999999999999997 799999999999999999999999987653 3334578999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDI 161 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~i 161 (488)
||+.+|||| |+|.|+||||+|++.++++.+.. ++++++|..||||++++.++.++...|.||+++|+++
T Consensus 128 ~d~~~fPfD-Q~C~l~fgSw~y~~~~i~l~~~~----------~~dl~~~~~n~EW~l~~~~~~~~~~~Y~cc~~~Y~~i 196 (205)
T 4aod_A 128 LADLKLETG-VTCSLKSGSWTHSTQELTLEVNA----------KVDLGDYASDTRFQLLNATQQVNRKQYPCCPETYEDT 196 (205)
T ss_dssp CTTSSSSSC-EEEEEEEEESSCCTTTEEEECSS----------SCBCTTSCTTCSSEEEEEEEEEEEEEETTEEEEEEEE
T ss_pred CccccCCCC-cEEEEEEECccccccEEEEEECC----------CcccccccccCCEEEEeeEEEEEEEEeCCCCCCcceE
Confidence 999999999 99999999999999999998743 3678899999999999999999999999999999999
Q ss_pred EEEEEeee
Q psy7197 162 TFNITMRR 169 (488)
Q Consensus 162 ~~~~~L~R 169 (488)
+|+|+|||
T Consensus 197 t~~~~lrR 204 (205)
T 4aod_A 197 TLSFTFRK 204 (205)
T ss_dssp EEEEEEEC
T ss_pred EEEEEEEC
Confidence 99999976
No 19
>4afh_A ACHBP; acetylcholine-binding protein, nicotinic receptor, ION chann; HET: NAG BMA MAN L0B; 1.88A {Capitella teleta} PDB: 4afg_A* 4b5d_A*
Probab=100.00 E-value=4.5e-38 Score=303.07 Aligned_cols=163 Identities=32% Similarity=0.621 Sum_probs=144.6
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|.+++|++|+|+|+||+|||++|+|++.+.++.++||+||++++|++++.++....++++|++||+|.|.+|++++++|+
T Consensus 59 ~t~~~~l~~~W~D~rL~wnp~~~~~i~~i~l~~~~IW~PDi~l~N~~~~~~~~~~~~~v~v~~~G~V~~~~~~~~~s~C~ 138 (230)
T 4afh_A 59 GTFKAIVKLSWVDTILRWDPEPPFDFQKIEISPDEIWTPDIKLFNSVDLDMTLDRTTQAIVFSNGTVLWIPPAVLKVLCV 138 (230)
T ss_dssp EEEEEEEEEEEECGGGCCCCCTTSCCSEEEECGGGSCCCCEEETTCSSSSCEECTTSCEEEETTSEEEECCEEEEEEEEE
T ss_pred EEEEEEEeeEEECccccCCcccCCCeeEEEeccCCEECCcEEEEecccccccccccceEEEEcCCEEEEecCEEEEEECC
Confidence 46789999999999999999999999999999999999999999999998876555689999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDI 161 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~i 161 (488)
| |||+|+|+|+||||+|+++++++.|..+. .++++ +|.++| |++.+.++.+....|.||+++|+++
T Consensus 139 m-----PfD~Q~C~l~f~S~~y~~~~v~l~~~~~~-------~~~d~-~~~~n~-W~l~~~~~~~~~~~y~cc~~~y~~i 204 (230)
T 4afh_A 139 S-----QDDVDSCHFQFGSWVYSVDEVDIHFMDDK-------AEVLL-DFYQDS-LEILENSAQRQEVVYPCCESAYVEM 204 (230)
T ss_dssp E-----ETTEEEEEEEEEESSCCTTTEEEEEGGGC-------CSCBC-TTCCCC-CCEEEEEEEEEEECCTTCSSCEEEE
T ss_pred C-----CCCcccCCEeeccccccCceEEEEECCCC-------cccce-eeecCc-EEEEEEEEEEEEEecCCCCCCccEE
Confidence 9 99999999999999999999999997642 14677 899999 9999999999998999999999999
Q ss_pred EEEEEeeeeeeeEEEee
Q psy7197 162 TFNITMRRKTLFYTVNL 178 (488)
Q Consensus 162 ~~~~~L~R~~~yY~~~l 178 (488)
+|+|+|||+++||+.+-
T Consensus 205 ~f~~~irRrpl~~~~~~ 221 (230)
T 4afh_A 205 KYLLALRSENGNSTYSR 221 (230)
T ss_dssp EEEEEEECC--------
T ss_pred EEEEEEEEeechhhccc
Confidence 99999999999998763
No 20
>2wn9_A Soluble acetylcholine receptor; 4-0H-DMXBA, acetylcholine binding protein; HET: ZY5 NAG BMA MAN; 1.75A {Aplysia californica} PDB: 2wnj_A* 2wzy_A* 2x00_A* 3peo_A* 2pgz_A* 2ph9_A* 4dbm_A* 3c84_A* 2byq_A* 2byr_A* 2bys_A* 2wnc_A* 2wnl_A* 3c79_A* 2byn_A* 3pmz_A* 2x00_D* 2xnv_A* 2xnt_A* 2xnu_A* ...
Probab=100.00 E-value=6.6e-38 Score=302.00 Aligned_cols=165 Identities=30% Similarity=0.659 Sum_probs=147.2
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|+|+|+||+|||++|+|++.++++.++||+||++++|++++.++.. ...++|++||+|.|.+|++++++|+
T Consensus 59 ~~~~~~l~~~W~D~rL~w~~~~y~~i~~l~~~~~~IW~PDi~l~N~~~~~~~~~-~~~v~i~~~G~V~~~~~~~~~~~C~ 137 (228)
T 2wn9_A 59 VDLVYYEQQRWKLNSLMWDPNEYGNITDFRTSAADIWTPDITAYSSTRPVQVLS-PQIAVVTHDGSVMFIPAQRLSFMCD 137 (228)
T ss_dssp EEEEEEEEEEEEEEEEECCGGGGTTCCEEEEEGGGSCCCCEEESSBSSCCEECS-CCEEEEETEEEEEECCEEEEEEECC
T ss_pred EEEEEEEEEEEECCCccCCchhcCCeeEEEecHHHccCCceecccccccccccc-cceEEEeCCeEEEEeCCEEEEEECC
Confidence 467899999999999999999999999999999999999999999999988766 6789999999999999999999999
Q ss_pred ---eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCe
Q psy7197 82 ---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPY 158 (488)
Q Consensus 82 ---~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~y 158 (488)
||++ |+|+|+|+||||+|+++++++.|..+ .++++.|..++||++.+.+..++...|.||+++|
T Consensus 138 ~~~mdl~----D~Q~C~l~f~Sw~y~~~~i~l~~~~~---------~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~y 204 (228)
T 2wn9_A 138 PTGVDSE----EGATCAVKFGSWVYSGFEIDLKTDTD---------QVDLSSYYASSKYEILSATQTRQVQHYSCCPEPY 204 (228)
T ss_dssp CTTTTST----TCEEEEEEEEESSCCTTTEEEECSCS---------BCBCTTCCTTCSEEEEEEEEEEEEECCSSCSSCE
T ss_pred CCCCCCC----cCcEeeEEEEeecccccEEEEEecCC---------ccchhhceecCCEEEEEEEEEEEEEeecCCCCCe
Confidence 9999 99999999999999999999998654 4677889999999999999999888899999999
Q ss_pred eeeEEEEEeeeeeeeEEEeeec
Q psy7197 159 LDITFNITMRRKTLFYTVNLII 180 (488)
Q Consensus 159 s~i~~~~~L~R~~~yY~~~lil 180 (488)
++++|+|+|||+++||++++++
T Consensus 205 ~~l~~~~~l~R~~~fYii~lil 226 (228)
T 2wn9_A 205 IDVNLVVKFRERRAGNGFFRNL 226 (228)
T ss_dssp EEEEEEEEEEECC---------
T ss_pred eEEEEEEEEEEeccceEEEEEE
Confidence 9999999999999999999875
No 21
>3sq6_A ACHBP, neuronal acetylcholine receptor subunit alpha-7, acetylcholine-binding protein; nicotinic receptor; HET: EPJ NAG; 2.80A {Homo sapiens} SCOP: b.96.1.1 PDB: 3sq9_A*
Probab=100.00 E-value=4.4e-38 Score=298.24 Aligned_cols=154 Identities=32% Similarity=0.661 Sum_probs=143.6
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCC--CceEEEEEeeeeeeeeeeEEecCCeeeecc
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNAD--GNFEVTLATKATLNYTGRVEWKPPAIYKSS 79 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~--~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~ 79 (488)
|.+++|++|.|+|+||+|||++|+|++.+.++.++||+||++++|+++ +.++.. +++|++||+|.|.+|++++++
T Consensus 48 ~t~~~~~~~~W~D~rL~w~~~~~~~i~~i~~~~~~iW~PDi~~~N~~~~~~~~~~~---~v~v~~~G~V~~~~~~~~~~~ 124 (204)
T 3sq6_A 48 VDVVFWLQMSWTDHYLQWNVSEYPGVKQVSVPISSLWVPDLAAYNAISKPEVLTPQ---LALVNSSGHVQYLPSIRQRFS 124 (204)
T ss_dssp EEEEEEEEEEEECGGGCCCTTTSSSCCEEEEEGGGSCCCCEEETTBSSCCEECSCC---EEEEETTSEEEECCEEEEEEE
T ss_pred EEEEEeeeeEEECCCcccChHHcCCccEEEcCHHHCcCCCEEeEcccccCCccccc---EEEEEeCCEEEEecCeeEEEe
Confidence 467899999999999999999999999999999999999999999999 555432 899999999999999999999
Q ss_pred ceeeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCee
Q psy7197 80 CEIDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYL 159 (488)
Q Consensus 80 C~~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys 159 (488)
|+||+ +||||+|+|.|+|+||+|+++++++.+. ..+.++|..+|||++.+.+..++...|.||+++|+
T Consensus 125 C~mdl-~fPfD~Q~C~l~f~S~~y~~~~v~l~~~-----------~~~~~~~~~~~eW~l~~~~~~~~~~~y~~c~~~y~ 192 (204)
T 3sq6_A 125 CDVSG-VDTESGATCKLKFGSWTHHSRELDLQMQ-----------EADISGYIPYSRFELVGVTQKRSERFYECCKEPYP 192 (204)
T ss_dssp CCCGG-GSSSSCEEEEEEEEESSCCTTTEEEECC-----------CCCCTTSCSSSSEEEEEEEEEEEEEECSSSSSEEE
T ss_pred ccccc-cCCCCCcEEEEEEEeecccCeEEEEEec-----------cCCHHHcccCCCEEEEEeEEEEEEEeeCCCCCCcc
Confidence 99999 9999999999999999999999999753 25677899999999999999999999999999999
Q ss_pred eeEEEEEeeee
Q psy7197 160 DITFNITMRRK 170 (488)
Q Consensus 160 ~i~~~~~L~R~ 170 (488)
+++|+|+||||
T Consensus 193 ~i~~~~~lrRr 203 (204)
T 3sq6_A 193 DVTFTVTFRKK 203 (204)
T ss_dssp EEEEEEEEEEC
T ss_pred eEEEEEEEEEC
Confidence 99999999997
No 22
>3igq_A GLR4197 protein; plgic Cys-loop, membrane protein, transport protein; 2.30A {Gloeobacter violaceus}
Probab=100.00 E-value=9.1e-38 Score=295.17 Aligned_cols=161 Identities=19% Similarity=0.219 Sum_probs=132.4
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
|++++|++|.|+|+||+|||++ +|++.+.++.++||+||++++|+++... .....++|++||+|.|.+|++++++|+
T Consensus 37 ~t~~~~l~~~W~D~rL~w~~~~-~~i~~~~~~~~~IW~PDi~l~N~~~~~~--~~~~~v~v~~~G~V~~~~~~~~~s~C~ 113 (201)
T 3igq_A 37 FKVNAFLSLSWKDRRLAFDPVR-SGVRVKTYEPEAIWIPEIRFVNVENARD--ADVVDISVSPDGTVQYLERFSARVLSP 113 (201)
T ss_dssp EEEEEEEEEEEECGGGCCCHHH-HTCSCEECCGGGSCCCCEEESSBSSSCE--EEEEEEEECTTCEEEEEEEEEEEEECC
T ss_pred EEEEEEEeeEEECCccCCCCcC-CCEeEecccccCcCccCEEEEccccccc--ccceEEEEeCCCcEEEecceeEEEecC
Confidence 4678999999999999999998 6899999999999999999999987653 445789999999999999999999999
Q ss_pred eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCeeee
Q psy7197 82 IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPYLDI 161 (488)
Q Consensus 82 ~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~ys~i 161 (488)
||+++||||+|+|+|+|+||+|+++++++.|..+ .++++++..++||++.+.+..+....|.||+++|+++
T Consensus 114 mdl~~FPfD~Q~C~l~f~S~~y~~~~v~l~~~~~---------~~~~~~~~~~~ew~l~~~~~~~~~~~y~cc~~~y~~i 184 (201)
T 3igq_A 114 LDGRRTESDSQTLHIYLIVRSVDTRNIVLAVDLE---------KVGKNDDVFLTGWDIESFTAVVKPANFALEDRLESKL 184 (201)
T ss_dssp CC------CEEEEEEEEEECCCSSCCEEEEECGG---------GCEESCSEEETTEEEEEEEEEEEC--------CCCEE
T ss_pred cccccCCCCccEeeEEEeccCCCceEEEEEecCC---------ccccccCcccCCeEEEeeEEEEEEEEeCCCCCccCeE
Confidence 9999999999999999999999999999998754 4577889999999999999999999999999999999
Q ss_pred EEEEEeeeeeeeE
Q psy7197 162 TFNITMRRKTLFY 174 (488)
Q Consensus 162 ~~~~~L~R~~~yY 174 (488)
+|++.+||+-+.+
T Consensus 185 ~f~i~irR~~~~~ 197 (201)
T 3igq_A 185 DYQLRISRQGGHH 197 (201)
T ss_dssp EEEEEEEEC----
T ss_pred EEEEEEEECCCCC
Confidence 9999999997754
No 23
>1uw6_A Acetylcholine-binding protein; pentamer, IGG fold, nicotine, glycoprotein; HET: NCT; 2.2A {Lymnaea stagnalis} SCOP: b.96.1.1 PDB: 1i9b_A* 1ux2_A* 3u8l_A* 1yi5_A 1uv6_A* 3u8k_A* 3u8j_B* 3u8m_A* 3u8n_A* 2zju_A* 2zjv_A*
Probab=100.00 E-value=3.9e-36 Score=286.40 Aligned_cols=159 Identities=26% Similarity=0.539 Sum_probs=145.3
Q ss_pred CCCccceeeeeecceeecCCCCCCCeeEEeeCCCccccccEEEEecCCCceEEEEEeeeeeeeeeeEEecCCeeeeccce
Q psy7197 2 YHSLPLCSQSWYDYKLTWDPKEYGGVEMLHVPSDHIWRPDIVLYNNADGNFEVTLATKATLNYTGRVEWKPPAIYKSSCE 81 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~C~ 81 (488)
+++++|++|.|+|+||+|||++|+| .+.++.++||+||++++|++++. ..+....++|++||+|.|.+|++++++|+
T Consensus 49 ~~~~~~~~~~W~D~rL~w~~~~~~~--~l~~~~~~iW~PDi~~~N~~~~~-~~~~~~~~~i~~~G~V~~~~~~~~~~~C~ 125 (211)
T 1uw6_A 49 VDVVFWQQTTWSDRTLAWNSSHSPD--QVSVPISSLWVPDLAAYNAISKP-EVLTPQLARVVSDGEVLYMPSIRQRFSCD 125 (211)
T ss_dssp EEEEEEEEEEEECGGGCCCCTTSCS--EEEEEGGGSCCCCEEETTBCSCC-EECSCCEEEEETTSEEEECCEEEEEEECC
T ss_pred EEEEEEEEeEeECcccccChhhcCC--eEEccHHHccCCCEeeecccccc-ccceeeEEEEeCCceEEEeCCEEEEEECC
Confidence 4678999999999999999999999 88999999999999999999988 55545789999999999999999999999
Q ss_pred ---eeeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeecccccc-ceeeeeEeeceeecccccccCCCC
Q psy7197 82 ---IDVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYT-SVEWDILEVPAVRNEKFYTCCDEP 157 (488)
Q Consensus 82 ---~dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~-~~eW~l~~~~~~~~~~~y~~~~~~ 157 (488)
||++ |+|+|+|+||||+|+++++++.|..+ .+++++|.. ++||++.+.+..++...|.||+++
T Consensus 126 ~~~mdl~----D~Q~C~l~f~S~~y~~~~i~l~~~~~---------~~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~ 192 (211)
T 1uw6_A 126 VSGVDTE----SGATCRIKIGSWTHHSREISVDPTTE---------NSDDSEYFSQYSRFEILDVTQKKNSVTYSCCPEA 192 (211)
T ss_dssp CTTTTSS----SCEEEEEEEEESSCCTTTEEEEECCC---------SSCTTTTSCTTSSEEEEEEEEEEEEEECTTCSSE
T ss_pred CCCCCCC----cceEeEEEEEcccccCceEEEEeccc---------ccchhhhcccCCCEEEEeeEEEEEEEEeCCCCCC
Confidence 9999 99999999999999999999998653 467788999 999999999999888889999999
Q ss_pred eeeeEEEEEeeeeeeeEEE
Q psy7197 158 YLDITFNITMRRKTLFYTV 176 (488)
Q Consensus 158 ys~i~~~~~L~R~~~yY~~ 176 (488)
|++++|+|+|||+++||++
T Consensus 193 y~~l~~~~~l~R~~~yyil 211 (211)
T 1uw6_A 193 YEDVEVSLNFRKKGRSEIL 211 (211)
T ss_dssp EEEEEEEEEEEECCCC---
T ss_pred cceEEEEEEEEEccceeEC
Confidence 9999999999999999974
No 24
>2bj0_A Acetylcholine-binding protein; 3D-structure, glycoprotein, glycprotein, IGG fold, immunoglobulin domain, pentamer, signal; HET: CXS; 2.0A {Bulinus truncatus}
Probab=100.00 E-value=6.5e-35 Score=276.35 Aligned_cols=155 Identities=25% Similarity=0.514 Sum_probs=144.0
Q ss_pred CCCccceeeeeeccee-ecCCCCCCCeeEEeeCCCccccccEEEEec-CCCceEEEEEeeeeeeeeeeEEecCCeeeecc
Q psy7197 2 YHSLPLCSQSWYDYKL-TWDPKEYGGVEMLHVPSDHIWRPDIVLYNN-ADGNFEVTLATKATLNYTGRVEWKPPAIYKSS 79 (488)
Q Consensus 2 ~~~~~~l~~~W~D~rL-~Wnp~~y~~i~~i~l~~~~IW~Pdi~l~N~-~~~~~~~~~~~~v~V~~~G~V~~~~~~~~~~~ 79 (488)
|.+++|++|.|+|+|| +|||++ |++.+.++.++||+||++++|+ +++.++.. ..++|++||+|.|.+|++++++
T Consensus 46 ~~~~~~~~~~W~D~rL~~w~~~~--~i~~~~~~~~~iW~PDi~~~N~~~~~~~~~~--~~v~i~~~G~V~~~~~~~~~~~ 121 (203)
T 2bj0_A 46 VEVVLWTQASWKVPYYSSLLSSS--SLDQVSLPVSKMWTPDLSFYNAIAAPELLSA--DRVVVSKDGSVIYVPSQRVRFT 121 (203)
T ss_dssp EEEEEEEEEEEECGGGGGGTTTS--SCSEEEEEGGGSCCCCEEETTCSSCCEECSC--CEEEEETTSEEEECCEEEEEEE
T ss_pred EEEEEEEEeEEECcchhccCccC--CceEEEEchhhccCCCccccccccccccccc--eEEEEeCCcEEEEecceEEEEE
Confidence 4678999999999999 999998 8999999999999999999999 99887655 7899999999999999999999
Q ss_pred cee-eeeeeccCcceeeeeecceeecceeeeeeeeccccCceeEeeeeeccccccceeeeeEeeceeecccccccCCCCe
Q psy7197 80 CEI-DVEYFPFDEQTCVMKFGSWTYDGFQVDLRHLDEEKGTNVVDIGVDLTAFYTSVEWDILEVPAVRNEKFYTCCDEPY 158 (488)
Q Consensus 80 C~~-dl~~FPFD~Q~C~l~f~S~~y~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~eW~l~~~~~~~~~~~y~~~~~~y 158 (488)
|+| |+++ ||+|+|+|+||||+|+++++++.|..+. ++++++|..++||++.+.+..++...|.||+++|
T Consensus 122 C~m~dl~~--fD~Q~C~l~f~S~~y~~~~v~l~~~~~~--------~~~~~~~~~~~ew~l~~~~~~~~~~~y~~~~~~y 191 (203)
T 2bj0_A 122 CDLINVDT--EPGATCRIKVGSWTHDNKQFALITGEEG--------VVNIAEYFDSPKFDLLSATQSLNRKKYSCCENMY 191 (203)
T ss_dssp CCCTTTTS--SSCEEEEEEEEESSCCTTTEEEEECTTT--------TSCTTTTCCCSSEEEEEEEEEEEEEECTTCSSEE
T ss_pred ccccccCc--cccceeeEEEEcccccCcEEEEEecCCC--------ccchhcceecCCEEEEEeEEEEEEEecCCCCCCe
Confidence 999 9999 9999999999999999999999986541 2577889999999999999999988999999999
Q ss_pred eeeEEEEEeeee
Q psy7197 159 LDITFNITMRRK 170 (488)
Q Consensus 159 s~i~~~~~L~R~ 170 (488)
++++|+|+|||+
T Consensus 192 ~~l~~~~~l~R~ 203 (203)
T 2bj0_A 192 DDIEITFAFRKK 203 (203)
T ss_dssp EEEEEEEEEEEC
T ss_pred eEEEEEEEEEEC
Confidence 999999999996
No 25
>2ksr_A Neuronal acetylcholine receptor subunit beta-2; nicotinic acetylcholine receptors, transmembrane domain, HFI junction, cell membrane; NMR {Homo sapiens} PDB: 2lm2_A
Probab=99.96 E-value=3.6e-34 Score=259.82 Aligned_cols=118 Identities=59% Similarity=0.969 Sum_probs=96.1
Q ss_pred ccccCCCCeeeeEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcc
Q psy7197 150 FYTCCDEPYLDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSL 229 (488)
Q Consensus 150 ~y~~~~~~ys~i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY 229 (488)
..++|+++|+++++++++||+++||.+++++||+++++++|++||+|+|+|||+++++|++|++++|
T Consensus 7 ~~~~~~~~y~~i~~~~~lrR~~~~Y~~~liiP~~li~~Ls~~~F~Lp~dsgeRvslgit~LLs~tvf------------- 73 (164)
T 2ksr_A 7 HSTSVDLGTENLYFQSNARRKPLFYTINLIIPCVLITSLAILVFYLPSDCGEKMTLCISVLLALTVF------------- 73 (164)
T ss_dssp ------------------CCCTHHHHHHTHHHHHHHHHHHHHHHTSCCCSHHHHHHHHHHHHHHHHH-------------
T ss_pred CCCCCCCCcceEEEEEEEEEeehheeeeehhhHHHHHHHHhheeEcCCCCCCeEEEeeehHHHHHHH-------------
Confidence 4567899999999999999999999999999999999999999999999999999999999999999
Q ss_pred cchhhhhhhhhhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCcccc
Q psy7197 230 VVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHV 295 (488)
Q Consensus 230 ~t~lD~~~~~~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~ 295 (488)
+..++|.+|++|+.+|+||+|+.+||+++++|++++++++|+|+|++.+|+
T Consensus 74 ---------------l~~v~~~lP~tS~~vPlI~~y~~~~m~~v~~sll~tv~Vl~~~~r~~~~~~ 124 (164)
T 2ksr_A 74 ---------------LLLISKIVPPTSLDVPLVGKYLMFTMVLVTFSIVTSVCVLNVHHRSPTTHT 124 (164)
T ss_dssp ---------------HHHHHTTCCSSCTTHHHHHHHHHHHHHHHHHHHHTHHHHHHHHTSSCCCCS
T ss_pred ---------------HHHHHHHCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCC
Confidence 888899999999999999999999999999999999999999988877764
No 26
>2lkg_A Acetylcholine receptor; transmembrane domain, SIGN protein; NMR {Torpedo marmorata} PDB: 2lkh_A
Probab=99.86 E-value=8.2e-28 Score=212.50 Aligned_cols=117 Identities=42% Similarity=0.562 Sum_probs=110.0
Q ss_pred ecccccccCCCCe--------eeeEEEEEeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhh
Q psy7197 146 RNEKFYTCCDEPY--------LDITFNITMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFF 217 (488)
Q Consensus 146 ~~~~~y~~~~~~y--------s~i~~~~~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~ 217 (488)
++.+.|+||+++| +++++++.+||+++||.+++++||+++++++|++||+|+|+|||+++++|++|++++|
T Consensus 16 ~~~~~y~cC~~~y~~~~~g~y~~l~~~f~lrR~~~~y~~~liiP~~li~~Ls~~~F~Lp~dsgeRvslgit~lLs~tvf- 94 (140)
T 2lkg_A 16 LKCVFDKICKIGTESVEAGRLIELSQEGGGGGGPLYFVVNVIEPCKKFSELTGLVFYLPTDSGEKMTESKSVLKSLTEK- 94 (140)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHTSCSSSCTHHHHHHHHHHHHHHHTHHHHSSSSCCSSSHHHHHHHHHHHHHHHH-
T ss_pred EEEEEecCCCCCccccCCCcEEEEEEEEEEEEcceeeeehhhhHHHHHHHHHhheeEcCCCCCCEEEEeeehHHHHHHH-
Confidence 4556788888766 7899999999999999999999999999999999999999999999999999999999
Q ss_pred hhhcccCCCCcccchhhhhhhhhhceeeeeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecC
Q psy7197 218 LLLAEIIPPTSLVVSLSISILLSLTVFFLLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRS 290 (488)
Q Consensus 218 ~~~~~~lP~vsY~t~lD~~~~~~~~~ill~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~ 290 (488)
+..+++.+|++|+.+|+||+|+.++|+++++|++++++++|+|||+
T Consensus 95 ---------------------------l~~v~~~lP~tS~~vPlI~~y~~~~~~~v~~sll~tv~Vln~~~r~ 140 (140)
T 2lkg_A 95 ---------------------------LKKIVELIPSTSSAVPLIGKYMLFTKEFVESSIKITEEVINTHHRS 140 (140)
T ss_dssp ---------------------------HHGGGGTCTTTGGGHHHHHHHHHHHHHHTTHHHHHHHHHHHHHHHC
T ss_pred ---------------------------HHHHHHhCCCccccccHHHHHHHHHHHHHHHHHHHHHhheeeeccC
Confidence 8889999999999999999999999999999999999999999874
No 27
>2lly_A Neuronal acetylcholine receptor subunit alpha-4; transmembrane domain, transport PROT; NMR {Homo sapiens}
Probab=99.86 E-value=2.4e-26 Score=202.99 Aligned_cols=117 Identities=56% Similarity=0.925 Sum_probs=109.2
Q ss_pred EeeeeeeeEEEeeeccccccceeeeEEEEccCCCCCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhhceee
Q psy7197 166 TMRRKTLFYTVNLIIPCMGISFLTILVFYLPSDSGEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSLTVFF 245 (488)
Q Consensus 166 ~L~R~~~yY~~~lilP~ili~~ls~~sF~Lp~~s~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~~~il 245 (488)
++||+++||.+++++||+++++++|++||+|+|+|||+++++|++|++++| +
T Consensus 2 ~lrR~~~~y~~~~iiP~~li~~Ls~~~F~lp~~s~eRv~lgit~lLs~tv~----------------------------l 53 (137)
T 2lly_A 2 NAEELPLFYTINLIIPCLLISCLTVLVFYLPSECGEKITLCISVLLSLTVF----------------------------L 53 (137)
T ss_dssp --CCCCHHHHHHHHHHHHHHHHHHHHHHHSCCSTTHHHHHHHHHHHHHHHH----------------------------H
T ss_pred ceEeeehhhhHHHHHHHHHHHHHHHHheeeCCCCCCeEEEEeeeHHHHHHH----------------------------H
Confidence 589999999999999999999999999999999999999999999999999 8
Q ss_pred eeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeeeecCCccccc-chhhhhHHhhhccc
Q psy7197 246 LLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIHFRSPQTHVM-SPWVKKVFIHLLPK 310 (488)
Q Consensus 246 l~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~~r~~~~~~~-p~w~r~~~l~~l~~ 310 (488)
..++|.+|++|+.+|+||+|+.+||+++++|++++++++|+|||++++|++ |.|++++|+-..+-
T Consensus 54 ~~~~~~lP~tS~~vpli~~y~~~~~~~v~~sl~~tv~V~~~~~r~~~~~~mp~~~~dr~~lwif~~ 119 (137)
T 2lly_A 54 LLITEIIPSTSSVSPSIGEYLLFTMIFVTLSIVITVFVLNVHHRSPETHTGGGGGIDRIFLWMFII 119 (137)
T ss_dssp HHHHHHCSCCSSSCCSTHHHHHHHHHHHHHHHHHHHHHHHCCSSCSSCCSSCSSSHHHHHHHHHHH
T ss_pred HHHHHhCCCCcccchHHHHHHHHHHHHHHHHhhhhhhhhhHHhcCCccCccchHHHHHHHHHHHHH
Confidence 888999999998999999999999999999999999999999999999998 58999999855444
No 28
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=98.85 E-value=8.9e-12 Score=97.22 Aligned_cols=52 Identities=27% Similarity=0.298 Sum_probs=49.8
Q ss_pred CCeeEEEEeeeeehhhhhhhhcccCCCCcccchhhhhhhhhhceeeeeEEee
Q psy7197 200 GEKVSLSISILLSLTVFFLLLAEIIPPTSLVVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 200 ~eRv~l~it~LLs~~vf~~~~~~~lP~vsY~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++|+++|++.+|+++.+...+++++|++||+|++|+|+++|++|+|..+.|+
T Consensus 2 paRv~LGittvLtmtt~~~~~~~~lPkVSYikAiDvw~~~C~~FVF~aLlEy 53 (76)
T 1vry_A 2 PARVGLGITTVLTLTTQSSGSRASLPKVSYVKAIDIWLAVCLLFVFSALLEY 53 (76)
T ss_dssp HHHHHHHHHHHHHHHHHHHCTTTCCCSHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEechHHHHHHHHHhcCcccCCCCccchHHHHHHHHHHHHHHHHHHHHH
Confidence 4799999999999999999999999999999999999999999999999986
No 29
>2lly_A Neuronal acetylcholine receptor subunit alpha-4; transmembrane domain, transport PROT; NMR {Homo sapiens}
Probab=97.12 E-value=0.00013 Score=63.72 Aligned_cols=33 Identities=36% Similarity=0.828 Sum_probs=30.1
Q ss_pred cchhhhHHHHHHHHHHhhhcccceEEecCccccC
Q psy7197 431 PAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYDD 464 (488)
Q Consensus 431 ~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~~ 464 (488)
.++|+||+|||+|.+++++||++|+++ |+.+|+
T Consensus 105 p~~~~dr~~lwif~~~~~~gt~~i~~~-p~~~~~ 137 (137)
T 2lly_A 105 GGGGIDRIFLWMFIIVCLLGTVGLFLP-PWLAGE 137 (137)
T ss_dssp CSSSHHHHHHHHHHHHHHHHHHHHHCC-STTTCC
T ss_pred chHHHHHHHHHHHHHHHHHhhhhheec-ccccCC
Confidence 368999999999999999999999999 888764
No 30
>3rqw_A ELIC pentameric ligand gated ION channel from ERW chrysanthemi; membrane, transport protein; HET: ACH MES; 2.91A {Dickeya dadantii} PDB: 2yn6_A* 3rqu_A* 3uq4_A 3uq5_A 3uq7_A 2vl0_A 2yks_A 4a97_A* 4a96_A* 2yoe_A* 4a98_A*
Probab=89.92 E-value=0.027 Score=55.92 Aligned_cols=57 Identities=11% Similarity=0.107 Sum_probs=39.1
Q ss_pred cccCCCCcccchhhhhhhhhhceeeeeEEeec---------CCCeeeec-cchhhhhHHhhhcceeeE
Q psy7197 221 AEIIPPTSLVVSLSISILLSLTVFFLLLAEII---------PPTSLVVP-LLGKFVLFTMILDTFSIC 278 (488)
Q Consensus 221 ~~~lP~vsY~t~lD~~~~~~~~~ill~l~e~l---------P~tS~~vP-li~~f~~~~m~lv~ls~~ 278 (488)
++.+|++||++++|.|+.+|++++++.+.|.+ |.+. .+| .+-+.+...++..++.++
T Consensus 250 ~~~lP~~s~vp~i~~~~~~~~~~v~~sll~~~~v~~l~~~~~~~~-~~p~w~r~~fl~~~~~~~~~l~ 316 (322)
T 3rqw_A 250 SNILPRLPYTTVIDQMIIAGYGSIFAAILLIIFAHHRQANGVEDD-LLIQRCRLAFPLGFLAIGCVLV 316 (322)
T ss_dssp HHHSCCCSSCCHHHHHHHHHHHHHHHHHHHHHHHHHSSSSSSCCC-HHHHTCTTHHHHHHHHTTSSSC
T ss_pred hhhCCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHccCcccc-CcchHHHHHHHHHHHHHHHHHH
Confidence 46899999999999999999999998877743 4332 334 444444545544444443
No 31
>3rhw_A Avermectin-sensitive glutamate-gated chloride CHA alpha; membrane protein, transport protein, Cys-loop receptor, LIGA ION channel, neurotransmitter receptor; HET: NAG IVM LMT UND; 3.26A {Caenorhabditis elegans} PDB: 3ri5_A* 3ria_A* 3rif_A*
Probab=89.28 E-value=0.036 Score=55.64 Aligned_cols=32 Identities=25% Similarity=0.413 Sum_probs=29.2
Q ss_pred cccCCCCcccchhhhhhhhhhceeeeeEEeec
Q psy7197 221 AEIIPPTSLVVSLSISILLSLTVFFLLLAEII 252 (488)
Q Consensus 221 ~~~lP~vsY~t~lD~~~~~~~~~ill~l~e~l 252 (488)
++.+|++||++++|+|+.+|++|+++++.|.+
T Consensus 264 ~~~lP~~S~v~~id~~~~~~~~~v~~slle~~ 295 (347)
T 3rhw_A 264 NSQLPPVSYIKAIDVWIGACMTFIFCALLEFA 295 (347)
T ss_dssp HHTSCCCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCccceeHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999999999999999999888854
No 32
>3tlw_A GLR4197 protein, GLIC; Cys-loop receptor family, membrane protein, transport protei; HET: LMT; 2.60A {Gloeobacter violaceus} PDB: 3uu4_A* 3uub_A* 3tlv_A* 3uu6_A* 3uu5_A* 3uu3_A* 3tlu_A* 3uu8_A* 3tls_A* 3tlt_A* 3p4w_A* 3p50_A* 3eam_A* 4f8h_A* 2xq4_A 2xq5_A 2xq6_A 2xq3_A 2xq8_A 2xqa_A ...
Probab=85.41 E-value=0.088 Score=52.12 Aligned_cols=32 Identities=16% Similarity=0.348 Sum_probs=29.2
Q ss_pred cccCCCCcccchhhhhhhhhhceeeeeEEeec
Q psy7197 221 AEIIPPTSLVVSLSISILLSLTVFFLLLAEII 252 (488)
Q Consensus 221 ~~~lP~vsY~t~lD~~~~~~~~~ill~l~e~l 252 (488)
++.+|++||++++|.|+.+|++++++.+.|.+
T Consensus 247 ~~~lP~~s~vp~i~~~~~~~~~~v~~sll~~v 278 (321)
T 3tlw_A 247 ETCLPKTPYMTYTGAIIFMIYLFYFVAVIEVT 278 (321)
T ss_dssp CCCCCCCSSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999999999999999999888854
No 33
>2lkg_A Acetylcholine receptor; transmembrane domain, SIGN protein; NMR {Torpedo marmorata} PDB: 2lkh_A
Probab=77.35 E-value=0.26 Score=42.82 Aligned_cols=31 Identities=23% Similarity=0.214 Sum_probs=27.1
Q ss_pred cccCCCCc-ccchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTS-LVVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vs-Y~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++| |+.++|.|+..|++++++.+.+.
T Consensus 99 ~~~lP~tS~~vPlI~~y~~~~~~~v~~sll~t 130 (140)
T 2lkg_A 99 VELIPSTSSAVPLIGKYMLFTKEFVESSIKIT 130 (140)
T ss_dssp GGTCTTTGGGHHHHHHHHHHHHHHTTHHHHHH
T ss_pred HHhCCCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 56899999 99999999999999988776653
No 34
>1mot_A Glycine receptor alpha-1 chain; second transmembrane domain, micelles, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=76.07 E-value=0.047 Score=33.77 Aligned_cols=27 Identities=22% Similarity=0.251 Sum_probs=23.5
Q ss_pred CCeeEEEEeeeeehhhhhhhhcccCCC
Q psy7197 200 GEKVSLSISILLSLTVFFLLLAEIIPP 226 (488)
Q Consensus 200 ~eRv~l~it~LLs~~vf~~~~~~~lP~ 226 (488)
++|+++|++.+|+++.+...++.++|+
T Consensus 2 paRv~LGittvLt~tt~~~~~~~~lPk 28 (28)
T 1mot_A 2 PARVGLGITTVLTMTTQSSGSRASLPK 28 (28)
T ss_dssp CHHHHHHHHHHHHHCCSSSSSSSSCCC
T ss_pred CceEEEcchhHHHHHHHHhhHhhhCCC
Confidence 578999999999999998888888875
No 35
>2ksr_A Neuronal acetylcholine receptor subunit beta-2; nicotinic acetylcholine receptors, transmembrane domain, HFI junction, cell membrane; NMR {Homo sapiens} PDB: 2lm2_A
Probab=72.58 E-value=0.35 Score=43.18 Aligned_cols=32 Identities=50% Similarity=1.025 Sum_probs=29.8
Q ss_pred cchhhhHHHHHHHHHHhhhcccceEEecCcccc
Q psy7197 431 PAMVLDRLFLWIFTLAVLIGSAGIILQAPTLYD 463 (488)
Q Consensus 431 ~A~V~Dr~~l~~f~~~~~~~t~~i~l~~~~~~~ 463 (488)
+|+|+||+|||+|.+++++||++|+++ |..++
T Consensus 132 ~a~v~Dr~~l~~f~~~~~~~t~~i~~~-p~~~~ 163 (164)
T 2ksr_A 132 VAMVIDRLFLWIFVFVCVFGTIGMFLQ-PLFQN 163 (164)
T ss_dssp TTHHHHHHHHHHHHHHHHHHHHHHHHT-TTSCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHheec-ccccc
Confidence 999999999999999999999999988 77654
No 36
>2bg9_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=71.08 E-value=0.15 Score=51.53 Aligned_cols=31 Identities=23% Similarity=0.308 Sum_probs=27.9
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++|| ++++|.|+++|++|+++++.|.
T Consensus 261 ~~~lP~~S~~vp~i~~~~~~~~~~v~~sl~~~ 292 (370)
T 2bg9_A 261 VELIPSTSSAVPLIGKYMLFTMIFVISSIIVT 292 (370)
T ss_dssp HHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHH
T ss_pred HhhCCCCcCCCCHHHHHHHHHHHHHHHHHHHH
Confidence 467999998 9999999999999999888875
No 37
>2bg9_C Acetylcholine receptor protein, delta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=63.43 E-value=0.26 Score=49.79 Aligned_cols=31 Identities=13% Similarity=0.276 Sum_probs=27.4
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++|| ++++|.|+.+|++|+++.+.+.
T Consensus 260 ~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~~ 291 (369)
T 2bg9_C 260 SQRLPETALAVPLIGKYLMFIMSLVTGVVVNC 291 (369)
T ss_dssp HHHHHHHHHTSCCCHHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCccCccHHHHHHHHHHHHHHHHHHHH
Confidence 467999998 9999999999999998877764
No 38
>2bg9_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=60.65 E-value=0.3 Score=49.38 Aligned_cols=31 Identities=23% Similarity=0.390 Sum_probs=27.0
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++|| ++++|.|+.+|++++++.+.+.
T Consensus 262 ~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~~ 293 (370)
T 2bg9_E 262 AQKVPETSLNVPLIGKYLIFVMFVSLVIVTNC 293 (370)
T ss_dssp HHHHHHHHHHSCCCSHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCccCCCChHHHHHHHHHHHHHHHHHHH
Confidence 467999999 9999999999999988777663
No 39
>2bg9_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, electron microscopy, ION transport, postsynaptic membrane; 4.00A {Torpedo marmorata}
Probab=59.35 E-value=0.34 Score=48.94 Aligned_cols=31 Identities=19% Similarity=0.248 Sum_probs=27.3
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++|| ++++|.|+.+|++++++.+.+.
T Consensus 258 ~~~lP~~S~~vp~i~~~~~~~~~~v~~sll~~ 289 (370)
T 2bg9_B 258 ADKVPETSLSVPIIISYLMFIMILVAFSVILS 289 (370)
T ss_dssp HHHHHHHHTTSCCCSHHHHHHHHHHHHHHHHH
T ss_pred HhhCCCccccccHHHHHHHHHHHHHHHHHHHH
Confidence 467999998 9999999999999998877664
No 40
>4aq5_B Acetylcholine receptor beta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_B
Probab=54.56 E-value=1.1 Score=47.20 Aligned_cols=32 Identities=19% Similarity=0.272 Sum_probs=28.1
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEeec
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEII 252 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~l 252 (488)
++.+|++|| ++++|.|+.+|++|+++.+.+.+
T Consensus 291 ~~~LP~tS~~vPlI~~y~~~~m~~v~lsll~tv 323 (493)
T 4aq5_B 291 ADKVPETSLSVPIIISYLMFIMILVAFSVILSV 323 (493)
T ss_dssp HHHTTTTTTSSCCCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCccccCCCchHhHHHHHHHHHHHHHHHHH
Confidence 568999998 99999999999999998877753
No 41
>4aq5_A Acetylcholine receptor subunit alpha; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_A
Probab=44.03 E-value=0.9 Score=47.30 Aligned_cols=32 Identities=22% Similarity=0.340 Sum_probs=28.1
Q ss_pred cccCCCCc-ccchhhhhhhhhhceeeeeEEeec
Q psy7197 221 AEIIPPTS-LVVSLSISILLSLTVFFLLLAEII 252 (488)
Q Consensus 221 ~~~lP~vs-Y~t~lD~~~~~~~~~ill~l~e~l 252 (488)
++.+|++| |++++|.|+.+|++++++.+.+.+
T Consensus 285 ~~~LP~tS~~vplI~~y~~~~m~~v~~sll~tv 317 (461)
T 4aq5_A 285 VELIPSTSSAVPLIGKYMLFTMIFVISSIIVTV 317 (461)
T ss_dssp HHHHHHHHHHSCCCGGGHHHHHHHHHHHHHHHH
T ss_pred HhhcCcccCCcCHHHHHHHHHHHHHHHHHHHHh
Confidence 46889999 999999999999999998887743
No 42
>1vry_A Glycine receptor alpha-1 chain; second transmembrane domain, third transmembrane domain, membrane protein; NMR {Homo sapiens} SCOP: j.35.1.1
Probab=37.89 E-value=0.19 Score=38.89 Aligned_cols=41 Identities=10% Similarity=0.041 Sum_probs=33.5
Q ss_pred eeEEeecCCCeeeeccchhhhhHHhhhcceeeEEEEEEEeee
Q psy7197 246 LLLAEIIPPTSLVVPLLGKFVLFTMILDTFSICVTVVVLNIH 287 (488)
Q Consensus 246 l~l~e~lP~tS~~vPli~~f~~~~m~lv~ls~~~tv~vl~~~ 287 (488)
..+...+|+.| .+.-|+.|+..|++++++++++.++|-.+.
T Consensus 20 ~~~~~~lPkVS-YikAiDvw~~~C~~FVF~aLlEya~V~y~~ 60 (76)
T 1vry_A 20 SGSRASLPKVS-YVKAIDIWLAVCLLFVFSALLEYAAVNFVS 60 (76)
T ss_dssp HCTTTCCCSHH-HHHHHHHTHHHHHHHHHHHHHHHHHHHHHC
T ss_pred cCcccCCCCcc-chHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 34456788887 788899999999999999999988865543
No 43
>4aq5_E Acetylcholine receptor gamma subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_E
Probab=32.85 E-value=1.7 Score=45.53 Aligned_cols=32 Identities=22% Similarity=0.410 Sum_probs=27.9
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEeec
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEII 252 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~l 252 (488)
++.+|++|| +.++|.|+++|++++++.+.+.+
T Consensus 269 ~~~LP~tS~~vPlI~~y~~~~m~lv~~Sll~tv 301 (488)
T 4aq5_E 269 AQKVPETSLNVPLIGKYLIFVMFVSLVIVTNCV 301 (488)
T ss_dssp HHHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCccccCccHHHHHHHHHHHHHHHHHHHHh
Confidence 568999998 99999999999999988877643
No 44
>4aq5_C Acetylcholine receptor delta subunit; membrane protein, freeze-trapping, asymmetric gating, allost mechanism; 6.20A {Torpedo marmorata} PDB: 4aq9_C
Probab=29.42 E-value=2.5 Score=44.64 Aligned_cols=31 Identities=13% Similarity=0.276 Sum_probs=27.3
Q ss_pred cccCCCCcc-cchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTSL-VVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vsY-~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++|| +.++|.|+++|++++++.+.+.
T Consensus 296 ~~~LP~tS~~vPlI~~y~~~~m~lv~lSll~t 327 (522)
T 4aq5_C 296 SQRLPETALAVPLIGKYLMFIMSLVTGVVVNC 327 (522)
T ss_dssp HHHHHHHTTTTTCCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcccCCccHHHHHHHHHHHHHHHHHHHH
Confidence 468899998 9999999999999998877764
No 45
>1oed_A Acetylcholine receptor protein, alpha chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 1dxz_A 3mra_A 2k59_B
Probab=28.22 E-value=1.8 Score=40.53 Aligned_cols=31 Identities=23% Similarity=0.309 Sum_probs=27.0
Q ss_pred cccCCCCc-ccchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTS-LVVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vs-Y~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++| |+.++|.|+..|++++.+.+.+.
T Consensus 51 ~~~lP~tS~~vPli~~y~~~~m~~v~~sl~~t 82 (227)
T 1oed_A 51 VELIPSTSSAVPLIGKYMLFTMIFVISSIIIT 82 (227)
T ss_dssp HHHHHHHHHHSCCCTHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCcccccchHHHHHHHHHHHHHHHHHHH
Confidence 56799999 99999999999999988776664
No 46
>1oed_B Acetylcholine receptor protein, beta chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1 PDB: 2k58_B
Probab=22.97 E-value=2.4 Score=40.30 Aligned_cols=31 Identities=16% Similarity=0.176 Sum_probs=26.9
Q ss_pred cccCCCCc-ccchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTS-LVVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vs-Y~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++| |+.++|.|+..|++++.+.+.+.
T Consensus 51 ~~~lP~tS~~vPli~~y~~~~m~~v~~sl~~t 82 (250)
T 1oed_B 51 ADKVPETSLSVPIIIRYLMFIMILVAFSVILS 82 (250)
T ss_dssp HHHHHHHHHHSCCCCTTHHHHHHHHHHHHHHH
T ss_pred HHHCCCCcccCCcHHHHHHHHHHHHHHHHHHH
Confidence 56789999 99999999999999988776664
No 47
>1oed_E Acetylcholine receptor protein, gamma chain; ION channel/receptor, ION channel, tubular crystal, transmembrane; 4.0A {Torpedo marmorata} SCOP: f.36.1.1
Probab=22.20 E-value=2.6 Score=40.35 Aligned_cols=31 Identities=23% Similarity=0.321 Sum_probs=26.5
Q ss_pred cccCCCCc-ccchhhhhhhhhhceeeeeEEee
Q psy7197 221 AEIIPPTS-LVVSLSISILLSLTVFFLLLAEI 251 (488)
Q Consensus 221 ~~~lP~vs-Y~t~lD~~~~~~~~~ill~l~e~ 251 (488)
++.+|++| |+.++|.|+.+|++++.+.+.+.
T Consensus 52 ~~~lP~tS~~vPli~~y~~~~m~~v~~sl~~t 83 (260)
T 1oed_E 52 AQKVPETSLNVPLIGKYLIFVMFVSMLIVMNC 83 (260)
T ss_dssp HHHHHHHHHHSCCCCSHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCcccchhHHHHHHHHHHHHHHHHHHH
Confidence 56789999 99999999999999888766653
Done!