BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7199
(146 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P60841|ENSA_RAT Alpha-endosulfine OS=Rattus norvegicus GN=Ensa PE=1 SV=1
Length = 121
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKAKY P++G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEAKLKAKY-----PSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + ++ TGD IPTP+ +P RK+S++ K
Sbjct: 80 KQLPSA---GADKNLVTGDHIPTPQDLPQRKSSLVTSKL 115
>sp|P60840|ENSA_MOUSE Alpha-endosulfine OS=Mus musculus GN=Ensa PE=1 SV=1
Length = 121
Score = 80.1 bits (196), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 61/99 (61%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKAKY P++G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEAKLKAKY-----PSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + ++ TGD IPTP+ +P RK+S++ K
Sbjct: 80 KQLPSA---GADKNLVTGDHIPTPQDLPQRKSSLVTSKL 115
>sp|P68211|ENSA_PIG Alpha-endosulfine OS=Sus scrofa GN=ENSA PE=1 SV=1
Length = 121
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKAKY P++G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEAKLKAKY-----PSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + + TGD IPTP+ +P RK+S++ K
Sbjct: 80 KQLPSA---GPDKNLVTGDHIPTPQDLPQRKSSLVTSKL 115
>sp|P68210|ENSA_BOVIN Alpha-endosulfine OS=Bos taurus GN=ENSA PE=2 SV=1
Length = 121
Score = 78.2 bits (191), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKAKY P++G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEAKLKAKY-----PSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + + TGD IPTP+ +P RK+S++ K
Sbjct: 80 KQLPSA---GPDKNLVTGDHIPTPQDLPQRKSSLVTSKL 115
>sp|O43768|ENSA_HUMAN Alpha-endosulfine OS=Homo sapiens GN=ENSA PE=1 SV=1
Length = 121
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 60/99 (60%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
E+AEEAKLKAKY P++G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 ERAEEAKLKAKY-----PSLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + + TGD IPTP+ +P RK+S++ K
Sbjct: 80 KQLPSA---GPDKNLVTGDHIPTPQDLPQRKSSLVTSKL 115
>sp|Q712U5|ARP19_RAT cAMP-regulated phosphoprotein 19 OS=Rattus norvegicus GN=Arpp19
PE=1 SV=3
Length = 112
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 25 EKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 74
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 75 KQLPAA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|P56212|ARP19_MOUSE cAMP-regulated phosphoprotein 19 OS=Mus musculus GN=Arpp19 PE=1
SV=2
Length = 112
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 25 EKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 74
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 75 KQLPAA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|Q6NVR1|ENSA_XENTR Alpha-endosulfine OS=Xenopus tropicalis GN=ensa PE=2 SV=1
Length = 125
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/109 (45%), Positives = 60/109 (55%), Gaps = 20/109 (18%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEE KLKAKY P +G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEQKLKAKY-----PNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKFT----PLHTI 124
KQ+P + TGD IPTP+ +P RK+S++ K LH +
Sbjct: 80 KQLP---CAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKLAGHVEDLHQV 125
>sp|Q7ZXH9|ENSA_XENLA Alpha-endosulfine OS=Xenopus laevis GN=ensa PE=1 SV=1
Length = 125
Score = 75.9 bits (185), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEE KLKAKY P +G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEQKLKAKY-----PNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKIK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + TGD IPTP+ +P RK+S++ K
Sbjct: 80 KQLP---CAGPDKNLVTGDHIPTPQDLPQRKSSLVTSKL 115
>sp|Q28055|ARP19_BOVIN cAMP-regulated phosphoprotein 19 OS=Bos taurus GN=ARPP19 PE=1 SV=2
Length = 112
Score = 75.9 bits (185), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 25 EKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 74
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 75 KQLPTA--TPDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|Q712U6|ARP19_PIG cAMP-regulated phosphoprotein 19 OS=Sus scrofa GN=ARPP19 PE=2 SV=3
Length = 112
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 25 EKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 74
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 75 KQLPTA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|P56211|ARP19_HUMAN cAMP-regulated phosphoprotein 19 OS=Homo sapiens GN=ARPP19 PE=1
SV=2
Length = 112
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 25 EKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 74
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 75 KQLPTA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|B5G1C4|ARP19_TAEGU cAMP-regulated phosphoprotein 19 OS=Taeniopygia guttata GN=ARPP19
PE=3 SV=2
Length = 112
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 50/102 (49%), Positives = 60/102 (58%), Gaps = 16/102 (15%)
Query: 20 LEIEKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPG 76
L EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 22 LSPEKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK--- 73
Query: 77 GLAKQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 74 --NKQLPTA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|Q5ZLY8|ARP19_CHICK cAMP-regulated phosphoprotein 19 OS=Gallus gallus GN=ARPP19 PE=3
SV=3
Length = 112
Score = 75.5 bits (184), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 49/99 (49%), Positives = 59/99 (59%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEEAKLKA+Y P +G G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 25 EKAEEAKLKARY-----PHLGQKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 74
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 75 KQLPTA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 110
>sp|B5XE27|ENSA_SALSA Alpha-endosulfine OS=Salmo salar GN=ensa PE=3 SV=1
Length = 115
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/121 (40%), Positives = 64/121 (52%), Gaps = 21/121 (17%)
Query: 1 MEVNNENEQPEFAKPNMSALEIEKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQ 57
ME +E + + N+ K EE KLKAKY P +G G S FL K+L KGQ
Sbjct: 11 MEYEDEKQDSQEKNANLV-----KGEEVKLKAKY-----PGLGQKPGGSDFLMKRLQKGQ 60
Query: 58 KYFDSGDYQMAKQTTGAPGGLAKQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPK 117
KYFDSGDY MAK KQ+P + + TGD IPTP+ +P R++S++ K
Sbjct: 61 KYFDSGDYNMAKAKMK-----NKQLP---VAGPDKNLVTGDHIPTPQDLPQRRSSLVTSK 112
Query: 118 F 118
Sbjct: 113 L 113
>sp|Q6DEB4|AR19A_XENLA cAMP-regulated phosphoprotein 19-A OS=Xenopus laevis GN=arpp19-a
PE=1 SV=1
Length = 117
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 48/96 (50%), Positives = 58/96 (60%), Gaps = 10/96 (10%)
Query: 23 EKAEEAKLKAKYAFKSGPAIGGHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLAKQI 82
EK+EE KLKA+Y GP GG S FL+K+L KGQKYFDSGDY MAK KQ+
Sbjct: 30 EKSEEIKLKARYP-NLGPKPGG-SDFLRKRLQKGQKYFDSGDYNMAKAKMK-----NKQL 82
Query: 83 PGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
P S+ TGD IPTP+ +P RK S++ K
Sbjct: 83 P---TAASDKTEVTGDHIPTPQDLPQRKPSLVASKL 115
>sp|Q5ZIF8|ENSA_CHICK Alpha-endosulfine OS=Gallus gallus GN=ENSA PE=3 SV=1
Length = 117
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/99 (47%), Positives = 57/99 (57%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
E+AEEAKLKAKY P +G G S FL K+L KGQKYFDSGDY MAK
Sbjct: 30 ERAEEAKLKAKY-----PNLGQKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + TGD IP P+ +P RK+S++ K
Sbjct: 80 KQLP---TAGPDKNLVTGDHIPKPQDLPQRKSSLVASKL 115
>sp|Q6GQG3|AR19B_XENLA cAMP-regulated phosphoprotein 19-B OS=Xenopus laevis GN=arpp19-b
PE=3 SV=1
Length = 117
Score = 73.6 bits (179), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/99 (48%), Positives = 58/99 (58%), Gaps = 16/99 (16%)
Query: 23 EKAEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLA 79
EKAEE KLK++Y P IG G S FL+K+L KGQKYFDSGDY MAK
Sbjct: 30 EKAEEIKLKSRY-----PNIGPKPGGSDFLRKRLQKGQKYFDSGDYNMAKAKMK-----N 79
Query: 80 KQIPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
KQ+P + P TGD IPTP+ +P RK S++ K
Sbjct: 80 KQLPTA--APDKTEV-TGDHIPTPQDLPQRKPSLVASKL 115
>sp|Q1L8X2|ENSA_DANRE Alpha-endosulfine OS=Danio rerio GN=ensa PE=2 SV=1
Length = 124
Score = 72.4 bits (176), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 56/97 (57%), Gaps = 16/97 (16%)
Query: 25 AEEAKLKAKYAFKSGPAIG---GHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLAKQ 81
+EEAKLKAKY P++G G S FL K+L KGQKYFDSGDY MAK +K
Sbjct: 39 SEEAKLKAKY-----PSLGHKPGGSDFLMKRLQKGQKYFDSGDYNMAKAKMK-----SKH 88
Query: 82 IPGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
+ S S TGD IPTP+ +P RK +I+ K
Sbjct: 89 VVQSAAEKS---LVTGDHIPTPQDLPQRKNTILTSKL 122
>sp|Q28GU6|ARP19_XENTR cAMP-regulated phosphoprotein 19 OS=Xenopus tropicalis GN=arpp19
PE=3 SV=1
Length = 117
Score = 69.3 bits (168), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 47/96 (48%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 23 EKAEEAKLKAKYAFKSGPAIGGHSTFLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLAKQI 82
EK+EE KLKA+Y GP GG S FL+K+L KGQKYFDSGDY +AK KQ+
Sbjct: 30 EKSEEIKLKARYP-NLGPKPGG-SDFLRKRLQKGQKYFDSGDYNVAKAKMK-----NKQL 82
Query: 83 PGSKLVPSNLGFGTGDAIPTPESVPARKTSIIQPKF 118
S P TGD IPTP+ +P RK S++ K
Sbjct: 83 --STAAPDKTEV-TGDHIPTPQDLPQRKPSLVASKL 115
>sp|P79058|IGO1_SCHPO mRNA stability protein mug134 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=mug134 PE=2 SV=4
Length = 139
Score = 42.4 bits (98), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 16/77 (20%)
Query: 48 FLQKKLAKGQKYFDSGDYQMAKQTTGAPGGLAKQIPGSKLVPSNLGFGTGDAIPTPESVP 107
L +KL +G+KYFDSGDY + K + G+ G IP+P+++P
Sbjct: 50 LLVQKLQQGRKYFDSGDYALNKAGKASDSGIT---------------CIGKEIPSPDTIP 94
Query: 108 ARKTSIIQPKFTP-LHT 123
R S P P LHT
Sbjct: 95 HRVVSAGSPNKEPSLHT 111
>sp|B0JY97|LEUC_MICAN 3-isopropylmalate dehydratase large subunit OS=Microcystis
aeruginosa (strain NIES-843) GN=leuC PE=3 SV=1
Length = 466
Score = 33.9 bits (76), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 93 GFGTGDAIPTPESVPARKTSIIQPKFTPLHTIPSTPTSG--INPPFV 137
G G + IPTPES+PA + +I + + + P P G I+ FV
Sbjct: 296 GIGVNEVIPTPESLPASERAIAEEAYQYMKLTPGAPIKGTKIDVCFV 342
>sp|Q5T440|CAF17_HUMAN Putative transferase CAF17, mitochondrial OS=Homo sapiens GN=IBA57
PE=1 SV=1
Length = 356
Score = 33.1 bits (74), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 38/89 (42%), Gaps = 7/89 (7%)
Query: 53 LAKGQKYFDSGDYQMAKQTTGAPGGLAKQIPGSKL-VPSNLGFGTGDAIP----TPESVP 107
L G + D DY + G P G+ PG L + SNL F G + + +
Sbjct: 207 LVPGGRLGDLWDYHQHRYLQGVPEGVRDLPPGVALPLESNLAFMNGVSFTKGCYIGQELT 266
Query: 108 AR--KTSIIQPKFTPLHTIPSTPTSGINP 134
AR +I+ + P+ + PTSGI P
Sbjct: 267 ARTHHMGVIRKRLFPVRFLDPLPTSGITP 295
>sp|Q54IZ9|RPC2_DICDI DNA-directed RNA polymerase III subunit rpc2 OS=Dictyostelium
discoideum GN=polr3b PE=3 SV=1
Length = 1608
Score = 32.7 bits (73), Expect = 0.67, Method: Composition-based stats.
Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 5/49 (10%)
Query: 93 GFGTGDAIPTPESVPARKTSIIQPKFTPLHTIPSTPTSGINPPFVPPSA 141
G D I P + A+K I+ K++PL+TI +TP NP +P SA
Sbjct: 1284 GLLDSDGIAKPGEL-AQKGQILVNKYSPLNTIDATP----NPELIPDSA 1327
>sp|B1WZV3|LEUC_CYAA5 3-isopropylmalate dehydratase large subunit OS=Cyanothece sp.
(strain ATCC 51142) GN=leuC PE=3 SV=1
Length = 467
Score = 32.0 bits (71), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 25/47 (53%), Gaps = 2/47 (4%)
Query: 93 GFGTGDAIPTPESVPARKTSIIQPKFTPLHTIPSTPTSG--INPPFV 137
G G + +PTPES+P +I Q ++ + P TP G ++ F+
Sbjct: 298 GIGISEPVPTPESLPESDRAIAQEAYSYMQLSPGTPIKGTKVDVCFI 344
>sp|B7KH96|LEUC_CYAP7 3-isopropylmalate dehydratase large subunit OS=Cyanothece sp.
(strain PCC 7424) GN=leuC PE=3 SV=1
Length = 467
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 2/47 (4%)
Query: 93 GFGTGDAIPTPESVPARKTSIIQPKFTPLHTIPSTPTSG--INPPFV 137
G G +A+PTPES+ I + + + IP +P G I+ F+
Sbjct: 298 GIGVSEAVPTPESLAESDRYIAKEAYEYMKLIPGSPIKGTKIDVCFI 344
>sp|Q96RK0|CIC_HUMAN Protein capicua homolog OS=Homo sapiens GN=CIC PE=1 SV=2
Length = 1608
Score = 29.3 bits (64), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 34/73 (46%), Gaps = 9/73 (12%)
Query: 75 PGGLAKQIPGSKLVP------SNLGFGTGDAIPT---PESVPARKTSIIQPKFTPLHTIP 125
PGG A+ +PG LVP S G G G +P P SVP + + K L +P
Sbjct: 911 PGGSAQLLPGKVLVPLAAPSMSVRGGGAGQPLPLVSPPFSVPVQNGAQPPSKIIQLTPVP 970
Query: 126 STPTSGINPPFVP 138
+ SG+ PP P
Sbjct: 971 VSTPSGLVPPLSP 983
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.308 0.129 0.372
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 63,691,074
Number of Sequences: 539616
Number of extensions: 2852253
Number of successful extensions: 6905
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 87
Number of HSP's that attempted gapping in prelim test: 6742
Number of HSP's gapped (non-prelim): 197
length of query: 146
length of database: 191,569,459
effective HSP length: 106
effective length of query: 40
effective length of database: 134,370,163
effective search space: 5374806520
effective search space used: 5374806520
T: 11
A: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 55 (25.8 bits)