BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy72
         (202 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|A6QPI6|TOM22_BOVIN Mitochondrial import receptor subunit TOM22 homolog OS=Bos taurus
           GN=TOMM22 PE=2 SV=1
          Length = 140

 Score = 36.2 bits (82), Expect = 0.16,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 41  PKESYSAAGEIFLIKVPIS--FYSFARTSTWLIATSATVALLPIVFESQR 88
           P+   SAAG  F + + ++   Y F+R + W+  TS  + +LP+VFE+++
Sbjct: 54  PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 103


>sp|Q4R3C7|TOM22_MACFA Mitochondrial import receptor subunit TOM22 homolog OS=Macaca
           fascicularis GN=TOMM22 PE=2 SV=3
          Length = 142

 Score = 35.8 bits (81), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 41  PKESYSAAGEIFLIKVPIS--FYSFARTSTWLIATSATVALLPIVFESQR 88
           P+   SAAG  F + + ++   Y F+R + W+  TS  + +LP+VFE+++
Sbjct: 56  PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105


>sp|Q9NS69|TOM22_HUMAN Mitochondrial import receptor subunit TOM22 homolog OS=Homo sapiens
           GN=TOMM22 PE=1 SV=3
          Length = 142

 Score = 35.8 bits (81), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 41  PKESYSAAGEIFLIKVPIS--FYSFARTSTWLIATSATVALLPIVFESQR 88
           P+   SAAG  F + + ++   Y F+R + W+  TS  + +LP+VFE+++
Sbjct: 56  PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105


>sp|Q9CPQ3|TOM22_MOUSE Mitochondrial import receptor subunit TOM22 homolog OS=Mus musculus
           GN=Tomm22 PE=2 SV=3
          Length = 142

 Score = 35.8 bits (81), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 41  PKESYSAAGEIFLIKVPIS--FYSFARTSTWLIATSATVALLPIVFESQR 88
           P+   SAAG  F + + ++   Y F+R + W+  TS  + +LP+VFE+++
Sbjct: 56  PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105


>sp|Q75Q41|TOM22_RAT Mitochondrial import receptor subunit TOM22 homolog OS=Rattus
           norvegicus GN=Tomm22 PE=1 SV=1
          Length = 142

 Score = 35.8 bits (81), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 17/50 (34%), Positives = 31/50 (62%), Gaps = 2/50 (4%)

Query: 41  PKESYSAAGEIFLIKVPIS--FYSFARTSTWLIATSATVALLPIVFESQR 88
           P+   SAAG  F + + ++   Y F+R + W+  TS  + +LP+VFE+++
Sbjct: 56  PERVRSAAGATFDLSLFVAQKMYRFSRAALWIGTTSFMILVLPVVFETEK 105


>sp|P50163|TRN2_DATST Tropinone reductase 2 OS=Datura stramonium GN=TR2 PE=1 SV=1
          Length = 260

 Score = 34.3 bits (77), Expect = 0.57,   Method: Compositional matrix adjust.
 Identities = 27/93 (29%), Positives = 39/93 (41%), Gaps = 16/93 (17%)

Query: 98  QQKQWSTRPFSWLIFAFQGVNFENVEH----HHPLKKILDTGHY---SPVYVAHKVPANV 150
           + K ++   +S ++     +NFE   H     HP  K  + G+    S V  A  VP   
Sbjct: 102 EAKDYTVEDYSLIM----SINFEAAYHLSVLAHPFLKASERGNVVFISSVSGALAVPYEA 157

Query: 151 ACGPHTHGSWKSLYLCLTFSWCRE----NGYGP 179
             G  T G+   L  CL F W ++    NG GP
Sbjct: 158 VYGA-TKGAMDQLTRCLAFEWAKDNIRVNGVGP 189


>sp|P50164|TRN2_HYONI Tropinone reductase 2 OS=Hyoscyamus niger GN=TR2 PE=2 SV=1
          Length = 260

 Score = 32.3 bits (72), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 25/93 (26%), Positives = 39/93 (41%), Gaps = 16/93 (17%)

Query: 98  QQKQWSTRPFSWLIFAFQGVNFENVEH----HHPLKKILDTGHY---SPVYVAHKVPANV 150
           + K ++   +S ++     +NFE   H     HP  K  + G+    S +  A  +P   
Sbjct: 102 EAKDYTMEDYSHIM----SINFEAAYHLSVLAHPFLKASERGNVVFISSISGASALPYEA 157

Query: 151 ACGPHTHGSWKSLYLCLTFSWCRE----NGYGP 179
             G  T G+   L  CL F W ++    NG GP
Sbjct: 158 VYGA-TKGAMDQLTRCLAFEWAKDNIRVNGVGP 189


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.134    0.431 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 79,487,165
Number of Sequences: 539616
Number of extensions: 3208515
Number of successful extensions: 5676
Number of sequences better than 100.0: 9
Number of HSP's better than 100.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 3
Number of HSP's that attempted gapping in prelim test: 5670
Number of HSP's gapped (non-prelim): 9
length of query: 202
length of database: 191,569,459
effective HSP length: 112
effective length of query: 90
effective length of database: 131,132,467
effective search space: 11801922030
effective search space used: 11801922030
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)