Query psy7210
Match_columns 159
No_of_seqs 105 out of 415
Neff 5.2
Searched_HMMs 13730
Date Fri Aug 16 20:59:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7210.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7210hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ji1a1 b.1.18.2 (A:1-122) Mal 80.9 6 0.00044 26.5 12.1 80 18-105 27-107 (122)
2 d1j0ha1 b.1.18.2 (A:1-123) Neo 68.8 14 0.00099 24.8 10.1 78 19-105 19-101 (123)
3 d1z0na1 b.1.18.21 (A:77-163) 5 64.3 5.2 0.00038 25.4 4.7 49 35-101 12-60 (87)
4 d3bmva2 b.3.1.1 (A:579-683) Cy 49.1 26 0.0019 22.6 6.3 83 20-112 5-91 (105)
5 d2qlvb1 b.1.18.21 (B:161-247) 44.5 24 0.0017 21.8 5.4 50 36-99 15-64 (87)
6 d1pgl11 b.121.4.2 (1:1-185) Co 42.9 40 0.0029 24.7 7.0 65 46-117 86-154 (185)
7 d1ny711 b.121.4.2 (1:1-189) Co 37.3 71 0.0052 23.3 8.5 66 45-117 84-153 (189)
8 d1wzla1 b.1.18.2 (A:1-120) Mal 35.7 54 0.004 21.5 10.7 77 19-105 19-100 (120)
9 d2a9da1 b.1.18.6 (A:344-466) S 28.9 75 0.0054 21.1 8.5 68 23-93 18-89 (123)
10 d1cyga2 b.3.1.1 (A:575-680) Cy 23.2 85 0.0062 19.7 5.6 81 23-112 8-92 (106)
11 d1mcti_ g.3.2.1 (I:) Trypsin i 20.9 11 0.00083 19.4 0.3 9 1-9 17-25 (28)
No 1
>d1ji1a1 b.1.18.2 (A:1-122) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}
Probab=80.91 E-value=6 Score=26.53 Aligned_cols=80 Identities=13% Similarity=0.108 Sum_probs=52.7
Q ss_pred CCCCeEeEEEEEeCcCcceEEEEEEecC-CCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEEcCC
Q psy7210 18 RSVLMFPGTVKVRNLSFKKEVIIRYSTN-NWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTEN 96 (159)
Q Consensus 18 ~s~~~L~G~v~V~NlafeK~V~VRyT~D-~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~v~g 96 (159)
..+..|+-.||++.-. -++|.|||.-+ .|. ...++..-..+... ..+|.|..+|+++ ..++.++..-..++
T Consensus 27 ~~g~~v~IRLRt~~~d-v~~V~l~~~d~~~~~-~~~~~m~~~~~~~~----~~fdywea~i~~~--~~~~~Y~F~l~~g~ 98 (122)
T d1ji1a1 27 TSTQSVTLKLRTFKGD-ITSANIKYWDTADNA-FHWVPMVWDSNDPT----GTFDYWKGTIPAS--PSIKYYRFQINDGT 98 (122)
T ss_dssp CTTCCEEEEEEEETTC-CSEEEEEEEETTTTE-EEEEECEEEEECTT----SSEEEEEEEECCC--SSCEEEEEEEEETT
T ss_pred CCCCEEEEEEEcccCC-ccEEEEEEecCCCCc-eeeEEEEEEeccCC----CcEEEEEEEEEcC--CCeEEEEEEEEcCC
Confidence 4567888888988644 46999999775 443 33333332222111 2489998888665 45677777777788
Q ss_pred eeeeecCCC
Q psy7210 97 EEFWDNNNS 105 (159)
Q Consensus 97 ~eyWDNN~G 105 (159)
+..|=|..|
T Consensus 99 ~~~yy~~~G 107 (122)
T d1ji1a1 99 STAWYNGNG 107 (122)
T ss_dssp EEEEEETTE
T ss_pred EEEEEcCCc
Confidence 888888776
No 2
>d1j0ha1 b.1.18.2 (A:1-123) Neopullulanase, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=68.84 E-value=14 Score=24.79 Aligned_cols=78 Identities=9% Similarity=0.115 Sum_probs=52.7
Q ss_pred CCCeEeEEEEEeCcCcceEEEEEEec-----CCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEE
Q psy7210 19 SVLMFPGTVKVRNLSFKKEVIIRYST-----NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYK 93 (159)
Q Consensus 19 s~~~L~G~v~V~NlafeK~V~VRyT~-----D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~ 93 (159)
++..|.-.++++.-.. ++|.|+|.- +.+-....+++..+.+.+ .+|.|...|+++ ..++.++..-.
T Consensus 19 ~~~~v~IRLRt~k~dv-~~V~l~~gD~y~~~~~~~~~~~~~M~k~~s~~------~fDywe~~i~~~--~~r~~Y~F~l~ 89 (123)
T d1j0ha1 19 DSETLHLRLRTKKDDI-DRVELLHGDPYDWQNGAWQFQMMPMRKTGSDE------LFDYWFAEVKPP--YRRLRYGFVLY 89 (123)
T ss_dssp SSSCEEEEEEEETTTC-SEEEEEEECTTCEETTEECCEEEECEEEEECS------SEEEEEEEECCT--TSCEEEEEEEE
T ss_pred CCCEEEEEEEecCCCc-cEEEEEEcCcccccCCcCceEEEEEEEeecCC------ceEEEEEEEECC--CCeEEEEEEEE
Confidence 5667888888886444 688888742 222233456666665443 489998777765 45677777777
Q ss_pred cCCeeeeecCCC
Q psy7210 94 TENEEFWDNNNS 105 (159)
Q Consensus 94 v~g~eyWDNN~G 105 (159)
-+++.+|=+..|
T Consensus 90 ~~~~~~~y~~~G 101 (123)
T d1j0ha1 90 SGEEKLVYTEKG 101 (123)
T ss_dssp ETTEEEEEETTE
T ss_pred cCCEEEEEcCCc
Confidence 788888877766
No 3
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]}
Probab=64.30 E-value=5.2 Score=25.41 Aligned_cols=49 Identities=20% Similarity=0.346 Sum_probs=32.0
Q ss_pred ceEEEEEEecCCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEEcCCeeeee
Q psy7210 35 KKEVIIRYSTNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTENEEFWD 101 (159)
Q Consensus 35 eK~V~VRyT~D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~v~g~eyWD 101 (159)
.++|.|.=+||+|+... .... -..|...|.||++ . ..-+|.++|+..=|
T Consensus 12 a~~V~v~Gsfn~W~~~~---~~~~-----------~g~~~~tl~L~~G--~--y~YKFiVDG~w~~d 60 (87)
T d1z0na1 12 GKEVYLSGSFNNWSKLP---MTRS-----------QNNFVAILDLPEG--E--HQYKFFVDGQWTHD 60 (87)
T ss_dssp CSCEEEEEGGGTTCCEE---CEEE-----------TTEEEEEEEECSE--E--EEEEEEETTEEECC
T ss_pred CEEEEEEEEeCCCCccc---cccC-----------CCcEEEEEECCCc--e--EEEEEEECCEEEeC
Confidence 46799999999998532 1111 1468889999853 3 44567788864333
No 4
>d3bmva2 b.3.1.1 (A:579-683) Cyclodextrin glycosyltransferase, C-terminal domain {Thermoanaerobacterium [TaxId: 28895]}
Probab=49.09 E-value=26 Score=22.58 Aligned_cols=83 Identities=19% Similarity=0.338 Sum_probs=47.6
Q ss_pred CCeEeEEEEEeCcCcceEEEEEEec---CCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEE-EEEEEcC
Q psy7210 20 VLMFPGTVKVRNLSFKKEVIIRYST---NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEF-CIAYKTE 95 (159)
Q Consensus 20 ~~~L~G~v~V~NlafeK~V~VRyT~---D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leF-cIrY~v~ 95 (159)
...|...|...++.|-..|.|-=.. -+|..-.-++..+..... .++.|+..+.||. +..+|| +|+ .-+
T Consensus 5 ~v~V~F~v~~~~t~~Gq~v~vvGs~~~LG~W~~~~a~~l~~~~~~~------~~~~W~~~v~lp~-~~~~eYKyv~-~~~ 76 (105)
T d3bmva2 5 QICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVY------QYPTWYYDVSVPA-GTTIQFKFIK-KNG 76 (105)
T ss_dssp EEEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSS------CTTSEEEEEEEET-TCEEEEEEEE-ESS
T ss_pred EEEEEEEEcccccCCCCEEEEEeCcHHHCCCCHHHCcccccccccC------CCCeEEEEEEECC-CCeEEEEEEE-EcC
Confidence 3445555555567777776665543 378664433333332221 2468999999985 456665 333 235
Q ss_pred CeeeeecCCCccEEEEe
Q psy7210 96 NEEFWDNNNSKNYIIKK 112 (159)
Q Consensus 96 g~eyWDNN~G~NY~v~~ 112 (159)
|...|.+ |.|-.+.+
T Consensus 77 ~~~~WE~--g~NR~~~~ 91 (105)
T d3bmva2 77 NTITWEG--GSNHTYTV 91 (105)
T ss_dssp SCCEECC--SSCEEEEC
T ss_pred CeEEEcC--CCCEEEEc
Confidence 5667886 56666654
No 5
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=44.53 E-value=24 Score=21.80 Aligned_cols=50 Identities=12% Similarity=0.167 Sum_probs=31.5
Q ss_pred eEEEEEEecCCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEEcCCeee
Q psy7210 36 KEVIIRYSTNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTENEEF 99 (159)
Q Consensus 36 K~V~VRyT~D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~v~g~ey 99 (159)
++|.|-=+||+|.... +....... -..|...|+||+ + .+.-+|.++|+..
T Consensus 15 ~~V~v~GsFn~W~~~~--~~~~~~~~--------~g~~~~~l~l~~--G--~y~YKFiVDG~w~ 64 (87)
T d2qlvb1 15 SKVYVTGSFTKWRKMI--GLIPDSDN--------NGSFHVKLRLLP--G--THRFRFIVDNELR 64 (87)
T ss_dssp SCEEEEEGGGTTSSCE--ECEECSSS--------TTCEEEEEEECS--E--EEEEEEEETTEEE
T ss_pred eEEEEEEEecCcCccc--ccccccCC--------CccEEEEEeCCC--C--CEEEEEEECCcEE
Confidence 6788988999998742 22222111 136888888875 3 3446777887543
No 6
>d1pgl11 b.121.4.2 (1:1-185) Comovirus coat proteins (VP37 and VP23) {BPMV (Bean pod mottle virus) [TaxId: 12260]}
Probab=42.92 E-value=40 Score=24.68 Aligned_cols=65 Identities=18% Similarity=0.374 Sum_probs=47.5
Q ss_pred CCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEE--cCCeeeeecC--CCccEEEEeeecCC
Q psy7210 46 NWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYK--TENEEFWDNN--NSKNYIIKKGIAPP 117 (159)
Q Consensus 46 ~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~--v~g~eyWDNN--~G~NY~v~~~~~~p 117 (159)
+|.++..+..+-..+.. -++-+.+.+.-| .+..|+|-|.-. ++|=|.|+-. +.+-|.+.+....|
T Consensus 86 dw~s~~q~~l~~s~~~~------s~~a~~~~~~~p-~s~El~Fs~eV~GPn~GFe~W~~~w~nqt~w~L~~~i~N~ 154 (185)
T d1pgl11 86 DWASLVQVFLTNSNSTE------HFDACRWTKSEP-HSWELIFPIEVCGPNNGFEMWSSEWANQTSWHLSFLVDNP 154 (185)
T ss_dssp GCCCEEEEEEESCSSTT------SCCSEEEEECCS-SEEEEEEEEEECBTTTBCBCTTCTTTTCCCCEEEEEEEST
T ss_pred cccceEEEEEEecCCcc------cccceEEEEecC-CcceEEEeEEEEcCCcchhhhcccccCceEEEEEEEecCc
Confidence 89999887755443332 367777777655 477899988876 6788999988 66789999886655
No 7
>d1ny711 b.121.4.2 (1:1-189) Comovirus coat proteins (VP37 and VP23) {CPMV (Cowpea mosaic virus) [TaxId: 12264]}
Probab=37.30 E-value=71 Score=23.34 Aligned_cols=66 Identities=20% Similarity=0.293 Sum_probs=47.6
Q ss_pred CCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEE--cCCeeeeecC--CCccEEEEeeecCC
Q psy7210 45 NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYK--TENEEFWDNN--NSKNYIIKKGIAPP 117 (159)
Q Consensus 45 D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~--v~g~eyWDNN--~G~NY~v~~~~~~p 117 (159)
-+|+++..+.-+-..+.. -++-+.+.+.-| .+..|+|-|.-. ++|=|.|+-. +.+-|.+.+.+..|
T Consensus 84 sdw~s~~q~~L~~s~~~~------s~~a~~w~i~~p-~s~El~Fs~eV~GPn~GFe~Wns~w~nQt~w~L~~~i~Np 153 (189)
T d1ny711 84 ADWDGQVFVYLRQSMNPE------SYDARTFVISQP-GSAMLNFSFDIIGPNSGFEFAESPWANQTTWYLECVATNP 153 (189)
T ss_dssp GGCCCCEEEEEESCCSTT------SCEEEEEEECCS-SCEEEEEEEEECBTTTBCBCTTCTTTTCCCCEEEEEESCT
T ss_pred ccchheEEEEEEecCCcc------cccceEEEEecC-CcceEEEeEEEEcCCcchhhhccccccceeEEEEEEecCc
Confidence 379999877633322222 378888887665 478899988876 6788999988 66789999886665
No 8
>d1wzla1 b.1.18.2 (A:1-120) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAII [TaxId: 2026]}
Probab=35.73 E-value=54 Score=21.53 Aligned_cols=77 Identities=8% Similarity=0.138 Sum_probs=51.1
Q ss_pred CCCeEeEEEEEeCcCcceEEEEEEec----CCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEEc
Q psy7210 19 SVLMFPGTVKVRNLSFKKEVIIRYST----NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKT 94 (159)
Q Consensus 19 s~~~L~G~v~V~NlafeK~V~VRyT~----D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~v 94 (159)
++..|.-.+|.+.-.. ++|.|+|.- +.+ ....++..-+.+.+ .+|.|...|+++ ..++.++..-.-
T Consensus 19 ~~~~l~IRLRT~k~dv-~~V~l~~gDpy~~~~~-~~~~~~M~k~~s~~------~fDywe~~i~~~--~~r~~Y~F~l~~ 88 (120)
T d1wzla1 19 SETQLRVRLRAKKGDV-VRCEVLYADRYASPEE-ELAHALAGKAGSDE------RFDYFEALLECS--TKRVKYVFLLTG 88 (120)
T ss_dssp ETTEEEEEEEEETTTC-SEEEEEEECTTCCTTS-CCEEEECEEEEECS------SEEEEEEEEECT--TSCEEEEEEEEC
T ss_pred CCCEEEEEEEeccCCc-cEEEEEEcCCccCCCC-CEEEEEEEEeccCC------CeeEEEEEEECC--CCeEEEEEEEEc
Confidence 5677888888885444 788888852 222 23345666554433 489999888775 557888888775
Q ss_pred -CCeeeeecCCC
Q psy7210 95 -ENEEFWDNNNS 105 (159)
Q Consensus 95 -~g~eyWDNN~G 105 (159)
+|+.+|=+..|
T Consensus 89 ~~g~~~~y~~~G 100 (120)
T d1wzla1 89 PQGEAVYFGETG 100 (120)
T ss_dssp TTSCEEEEETTE
T ss_pred CCccEEEEcCCc
Confidence 46777766555
No 9
>d2a9da1 b.1.18.6 (A:344-466) Sulfite oxidase, C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
Probab=28.93 E-value=75 Score=21.05 Aligned_cols=68 Identities=12% Similarity=0.253 Sum_probs=45.0
Q ss_pred EeEEEEEeCcCcc----eEEEEEEecCCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEEEEEE
Q psy7210 23 FPGTVKVRNLSFK----KEVIIRYSTNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYK 93 (159)
Q Consensus 23 L~G~v~V~Nlafe----K~V~VRyT~D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFcIrY~ 93 (159)
-.|.+.|+-+||. .-..|-.++|+=+|+++ |.-..+..+......+-.|++.+.++. ++..++++|-.
T Consensus 18 ~~g~~~v~G~A~sggg~~I~rVEVS~DgG~tW~~--A~l~~~~~~~~~~~~W~~W~~~~~~~~-~~~~~i~~RA~ 89 (123)
T d2a9da1 18 PPGELTVKGYAWSGGGREVVRVDVSLDGGRTWKV--ARLMGDKAPPGRAWAWALWELTVPVEA-GTELEIVCKAV 89 (123)
T ss_dssp CSEEEEEEEEEECSTTCCEEEEEEESBSSSSCEE--CEECSCCCCTTCCCSCEEEEEEEEECT-TCEEEEEEEEE
T ss_pred cCCeEEEEEEEEcCCCceEEEEEEEcCCCCccEE--eEecCccCCCCceeEEEEEEEEEEcCC-CCeEEEEEEEE
Confidence 3589999999983 36788889998777763 333332221111124678888888875 46778888875
No 10
>d1cyga2 b.3.1.1 (A:575-680) Cyclodextrin glycosyltransferase, C-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=23.16 E-value=85 Score=19.74 Aligned_cols=81 Identities=19% Similarity=0.343 Sum_probs=41.5
Q ss_pred EeEEEEEeCcCcceEEEEEEec---CCCceeeEEEEEEeCCCCCCCCCceeEEEEEEEEcCCCCCeEEEE-EEEEcCCee
Q psy7210 23 FPGTVKVRNLSFKKEVIIRYST---NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFC-IAYKTENEE 98 (159)
Q Consensus 23 L~G~v~V~NlafeK~V~VRyT~---D~W~T~~dv~A~yv~~~~~~~~~~~~D~F~F~i~lp~~~~~leFc-IrY~v~g~e 98 (159)
+...|....+.+-..|.|-=.. -+|..-.-++..+..... ....|...+.+|. +..+||= |....+|..
T Consensus 8 V~F~v~~~~t~~Gq~v~vvGs~~~LG~W~~~~a~~l~~~~~~~------~~~~w~~~v~~~~-~~~~eYKyvi~~~~g~~ 80 (106)
T d1cyga2 8 VRFVVNNATTNLGQNIYIVGNVYELGNWDTSKAIGPMFNQVVY------SYPTWYIDVSVPE-GKTIEFKFIKKDSQGNV 80 (106)
T ss_dssp EEEEEESCCCCSSCEEEEEESSGGGBTTCGGGCBCCCBCSSSS------CTTCEEEEEEEES-SCEEEEEEEEECTTSCE
T ss_pred EEEEEcceEcCCCCEEEEEcCHHHHCCCCHHHCccceeccCcC------CCCeEEEEEEeCC-CCeEEEEEEEEcCCCCE
Confidence 4444433445555555554442 366654333334333221 1346778888875 3344441 122346777
Q ss_pred eeecCCCccEEEEe
Q psy7210 99 FWDNNNSKNYIIKK 112 (159)
Q Consensus 99 yWDNN~G~NY~v~~ 112 (159)
.|.+ |.|-.+.+
T Consensus 81 ~WE~--g~NR~~~~ 92 (106)
T d1cyga2 81 TWES--GSNHVYTT 92 (106)
T ss_dssp EECC--SSCEEEEC
T ss_pred EEcC--CCCEEEEe
Confidence 8875 56666654
No 11
>d1mcti_ g.3.2.1 (I:) Trypsin inhibitor {Bitter gourd (Momordica charantia), linn. Cucurbitaceae, seed [TaxId: 3673]}
Probab=20.90 E-value=11 Score=19.40 Aligned_cols=9 Identities=56% Similarity=1.217 Sum_probs=7.1
Q ss_pred CceeeeecC
Q psy7210 1 MTKCICHDD 9 (159)
Q Consensus 1 ~~~~~~~~~ 9 (159)
|.||+|.+.
T Consensus 17 ~a~cicv~g 25 (28)
T d1mcti_ 17 MAKCICVAG 25 (28)
T ss_dssp STTCCEETT
T ss_pred hheeEEecc
Confidence 678999764
Done!