Query psy7211
Match_columns 312
No_of_seqs 210 out of 444
Neff 5.2
Searched_HMMs 13730
Date Fri Aug 16 20:59:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7211.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/7211hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ji1a1 b.1.18.2 (A:1-122) Mal 51.6 41 0.003 24.7 11.0 77 172-256 30-107 (122)
2 d3bmva2 b.3.1.1 (A:579-683) Cy 44.0 36 0.0026 24.5 7.1 83 172-263 6-91 (105)
3 d1z0na1 b.1.18.21 (A:77-163) 5 39.1 23 0.0017 24.7 5.1 45 186-248 12-56 (87)
4 d3d85d3 b.1.2.1 (D:212-305) Th 33.0 29 0.0021 23.8 4.8 16 236-251 37-52 (94)
5 d2qlvb1 b.1.18.21 (B:161-247) 31.4 30 0.0022 23.9 4.6 48 187-248 15-62 (87)
6 d1pgl11 b.121.4.2 (1:1-185) Co 29.8 77 0.0056 25.7 7.4 79 173-265 65-151 (185)
7 d1ny711 b.121.4.2 (1:1-189) Co 29.4 1.2E+02 0.0088 24.5 8.6 79 174-266 66-151 (189)
8 d1j0ha1 b.1.18.2 (A:1-123) Neo 26.8 1.1E+02 0.008 22.3 10.3 77 171-256 20-101 (123)
9 d1g87a2 b.2.2.2 (A:457-614) En 25.6 1.4E+02 0.01 23.1 9.7 84 170-255 13-125 (158)
10 d1yq2a4 b.30.5.1 (A:722-1023) 21.9 2.2E+02 0.016 23.9 10.7 101 155-263 86-187 (302)
No 1
>d1ji1a1 b.1.18.2 (A:1-122) Maltogenic amylase, N-terminal domain N {Thermoactinomyces vulgaris, TVAI [TaxId: 2026]}
Probab=51.59 E-value=41 Score=24.71 Aligned_cols=77 Identities=14% Similarity=0.148 Sum_probs=47.1
Q ss_pred ceEEEEEEEecCCCCcEEEEEEEeC-CCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEEcCCcee
Q psy7211 172 NLVTGTVKVRNLSFKKEVIIRYSTN-NWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTENEEF 250 (312)
Q Consensus 172 ~~L~GtV~V~NlafeK~V~VRyT~D-~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~~~g~ey 250 (312)
..|+-.+|++.-.- ++|.|||.-+ .| +...++..-..+... ..+|-|...|+++ ..++..+..-.-+++..
T Consensus 30 ~~v~IRLRt~~~dv-~~V~l~~~d~~~~-~~~~~~m~~~~~~~~----~~fdywea~i~~~--~~~~~Y~F~l~~g~~~~ 101 (122)
T d1ji1a1 30 QSVTLKLRTFKGDI-TSANIKYWDTADN-AFHWVPMVWDSNDPT----GTFDYWKGTIPAS--PSIKYYRFQINDGTSTA 101 (122)
T ss_dssp CCEEEEEEEETTCC-SEEEEEEEETTTT-EEEEEECEEEEECTT----SSEEEEEEEECCC--SSCEEEEEEEEETTEEE
T ss_pred CEEEEEEEcccCCc-cEEEEEEecCCCC-ceeeEEEEEEeccCC----CcEEEEEEEEEcC--CCeEEEEEEEEcCCEEE
Confidence 45666777776554 4799999776 45 333333333222111 3478887666654 45676666666777888
Q ss_pred eecCCC
Q psy7211 251 WDNNNS 256 (312)
Q Consensus 251 WDNN~G 256 (312)
|=|.+|
T Consensus 102 yy~~~G 107 (122)
T d1ji1a1 102 WYNGNG 107 (122)
T ss_dssp EEETTE
T ss_pred EEcCCc
Confidence 877666
No 2
>d3bmva2 b.3.1.1 (A:579-683) Cyclodextrin glycosyltransferase, C-terminal domain {Thermoanaerobacterium [TaxId: 28895]}
Probab=44.02 E-value=36 Score=24.49 Aligned_cols=83 Identities=19% Similarity=0.305 Sum_probs=48.8
Q ss_pred ceEEEEEEEecCCCCcEEEEEEEe---CCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEEcCCc
Q psy7211 172 NLVTGTVKVRNLSFKKEVIIRYST---NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTENE 248 (312)
Q Consensus 172 ~~L~GtV~V~NlafeK~V~VRyT~---D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~~~g~ 248 (312)
..|+.+|...++.|-..|.|-=.. -+|..-.-+...+..... .++.|+..+.||. +..+||=..=.-+|.
T Consensus 6 v~V~F~v~~~~t~~Gq~v~vvGs~~~LG~W~~~~a~~l~~~~~~~------~~~~W~~~v~lp~-~~~~eYKyv~~~~~~ 78 (105)
T d3bmva2 6 ICVRFVVNNASTVYGENVYLTGNVAELGNWDTSKAIGPMFNQVVY------QYPTWYYDVSVPA-GTTIQFKFIKKNGNT 78 (105)
T ss_dssp EEEEEEEESCCCCTTCEEEEEESSGGGTTTCGGGCBCSCBCSSSS------CTTSEEEEEEEET-TCEEEEEEEEESSSC
T ss_pred EEEEEEEcccccCCCCEEEEEeCcHHHCCCCHHHCcccccccccC------CCCeEEEEEEECC-CCeEEEEEEEEcCCe
Confidence 345555554567787777665553 388765444444433221 2467999999986 456665221123555
Q ss_pred eeeecCCCcceEEEe
Q psy7211 249 EFWDNNNSKNYIIKK 263 (312)
Q Consensus 249 eyWDNN~G~NY~v~~ 263 (312)
..|.+ |.|-.+..
T Consensus 79 ~~WE~--g~NR~~~~ 91 (105)
T d3bmva2 79 ITWEG--GSNHTYTV 91 (105)
T ss_dssp CEECC--SSCEEEEC
T ss_pred EEEcC--CCCEEEEc
Confidence 66875 66777664
No 3
>d1z0na1 b.1.18.21 (A:77-163) 5'-AMP-activated protein kinase subunit beta-1 {Rattus norvegicus [TaxId: 10116]}
Probab=39.11 E-value=23 Score=24.72 Aligned_cols=45 Identities=22% Similarity=0.426 Sum_probs=30.2
Q ss_pred CcEEEEEEEeCCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEEcCCc
Q psy7211 186 KKEVIIRYSTNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTENE 248 (312)
Q Consensus 186 eK~V~VRyT~D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~~~g~ 248 (312)
.++|.|.=+||+|.... .. .. -+.|..+|.||+. . ...+|.++|+
T Consensus 12 a~~V~v~Gsfn~W~~~~---~~--~~---------~g~~~~tl~L~~G--~--y~YKFiVDG~ 56 (87)
T d1z0na1 12 GKEVYLSGSFNNWSKLP---MT--RS---------QNNFVAILDLPEG--E--HQYKFFVDGQ 56 (87)
T ss_dssp CSCEEEEEGGGTTCCEE---CE--EE---------TTEEEEEEEECSE--E--EEEEEEETTE
T ss_pred CEEEEEEEEeCCCCccc---cc--cC---------CCcEEEEEECCCc--e--EEEEEEECCE
Confidence 36799999999998532 11 11 1468889999863 2 4456778875
No 4
>d3d85d3 b.1.2.1 (D:212-305) The p40 domain of interleukin-12 (IL-12 beta chain), domains 2 and 3 {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.98 E-value=29 Score=23.84 Aligned_cols=16 Identities=13% Similarity=0.416 Sum_probs=7.9
Q ss_pred eEEEEEEEEcCCceee
Q psy7211 236 QIEFCIAYKTENEEFW 251 (312)
Q Consensus 236 ~iEFcIrY~~~g~eyW 251 (312)
.|+|-|+|+..+..-|
T Consensus 37 ~L~Yev~y~~~~~~~~ 52 (94)
T d3d85d3 37 SLTFCVQVQGKSKREK 52 (94)
T ss_dssp CEEEEEEEECC-----
T ss_pred EEEEEEEEEECCCCcc
Confidence 5777777776554444
No 5
>d2qlvb1 b.1.18.21 (B:161-247) SIP2 {Saccharomyces cerevisiae [TaxId: 4932]}
Probab=31.41 E-value=30 Score=23.89 Aligned_cols=48 Identities=13% Similarity=0.259 Sum_probs=30.6
Q ss_pred cEEEEEEEeCCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEEcCCc
Q psy7211 187 KEVIIRYSTNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKTENE 248 (312)
Q Consensus 187 K~V~VRyT~D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~~~g~ 248 (312)
++|.|-=+||+|..-..+ ...... ...|.-.|.||+. .+.-+|.++|.
T Consensus 15 ~~V~v~GsFn~W~~~~~~--~~~~~~--------~g~~~~~l~l~~G----~y~YKFiVDG~ 62 (87)
T d2qlvb1 15 SKVYVTGSFTKWRKMIGL--IPDSDN--------NGSFHVKLRLLPG----THRFRFIVDNE 62 (87)
T ss_dssp SCEEEEEGGGTTSSCEEC--EECSSS--------TTCEEEEEEECSE----EEEEEEEETTE
T ss_pred eEEEEEEEecCcCccccc--ccccCC--------CccEEEEEeCCCC----CEEEEEEECCc
Confidence 679999999999873222 222211 1358888888862 34466778875
No 6
>d1pgl11 b.121.4.2 (1:1-185) Comovirus coat proteins (VP37 and VP23) {BPMV (Bean pod mottle virus) [TaxId: 12260]}
Probab=29.85 E-value=77 Score=25.65 Aligned_cols=79 Identities=18% Similarity=0.344 Sum_probs=52.9
Q ss_pred eEEEEEEEecCCCCcEEEEEEE----eCCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEE--cC
Q psy7211 173 LVTGTVKVRNLSFKKEVIIRYS----TNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYK--TE 246 (312)
Q Consensus 173 ~L~GtV~V~NlafeK~V~VRyT----~D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~--~~ 246 (312)
=..||++|+ |.+|-. --+|.++..+..+-..+. ..++-+.+.+.-|. ...|||-|.-. ++
T Consensus 65 WkrGTlhfk-------Vv~~gns~vkrsdw~s~~q~~l~~s~~~------~s~~a~~~~~~~p~-s~El~Fs~eV~GPn~ 130 (185)
T d1pgl11 65 WKKGCLMVK-------VVMSGNAAVKRSDWASLVQVFLTNSNST------EHFDACRWTKSEPH-SWELIFPIEVCGPNN 130 (185)
T ss_dssp EEEEEEEEE-------EEEECCTTSCGGGCCCEEEEEEESCSST------TSCCSEEEEECCSS-EEEEEEEEEECBTTT
T ss_pred hhcCeEEEE-------EEEEecchhccccccceEEEEEEecCCc------ccccceEEEEecCC-cceEEEeEEEEcCCc
Confidence 357888663 333331 128999988875543332 23567777766554 67888888776 67
Q ss_pred CceeeecC--CCcceEEEeee
Q psy7211 247 NEEFWDNN--NSKNYIIKKGI 265 (312)
Q Consensus 247 g~eyWDNN--~G~NY~v~~~~ 265 (312)
|-|.|+.. +-+-|.+.+..
T Consensus 131 GFe~W~~~w~nqt~w~L~~~i 151 (185)
T d1pgl11 131 GFEMWSSEWANQTSWHLSFLV 151 (185)
T ss_dssp BCBCTTCTTTTCCCCEEEEEE
T ss_pred chhhhcccccCceEEEEEEEe
Confidence 89999988 45678888875
No 7
>d1ny711 b.121.4.2 (1:1-189) Comovirus coat proteins (VP37 and VP23) {CPMV (Cowpea mosaic virus) [TaxId: 12264]}
Probab=29.36 E-value=1.2e+02 Score=24.46 Aligned_cols=79 Identities=20% Similarity=0.285 Sum_probs=54.4
Q ss_pred EEEEEEEecCCCCcEEEEEEEe---CCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEE--cCCc
Q psy7211 174 VTGTVKVRNLSFKKEVIIRYST---NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYK--TENE 248 (312)
Q Consensus 174 L~GtV~V~NlafeK~V~VRyT~---D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~--~~g~ 248 (312)
..||++|+ |.+|=.. -+|.++..+.-+-..+. ..++-|.+.+.-|. ...|||-|.-. ++|-
T Consensus 66 krGTlhfk-------Vv~~g~svkrsdw~s~~q~~L~~s~~~------~s~~a~~w~i~~p~-s~El~Fs~eV~GPn~GF 131 (189)
T d1ny711 66 KSGTIHVQ-------LNVRGAGVKRADWDGQVFVYLRQSMNP------ESYDARTFVISQPG-SAMLNFSFDIIGPNSGF 131 (189)
T ss_dssp EEEEEEEE-------EEEEECCCCGGGCCCCEEEEEESCCST------TSCEEEEEEECCSS-CEEEEEEEEECBTTTBC
T ss_pred hcCeEEEE-------EEEEecceeeccchheEEEEEEecCCc------ccccceEEEEecCC-cceEEEeEEEEcCCcch
Confidence 57887764 5555532 37999888774432222 23678888876664 67888888776 6889
Q ss_pred eeeecC--CCcceEEEeeeC
Q psy7211 249 EFWDNN--NSKNYIIKKGIA 266 (312)
Q Consensus 249 eyWDNN--~G~NY~v~~~~~ 266 (312)
|.|+.. +-+-|.+.+...
T Consensus 132 e~Wns~w~nQt~w~L~~~i~ 151 (189)
T d1ny711 132 EFAESPWANQTTWYLECVAT 151 (189)
T ss_dssp BCTTCTTTTCCCCEEEEEES
T ss_pred hhhccccccceeEEEEEEec
Confidence 999988 456788888753
No 8
>d1j0ha1 b.1.18.2 (A:1-123) Neopullulanase, N-terminal domain {Bacillus stearothermophilus [TaxId: 1422]}
Probab=26.78 E-value=1.1e+02 Score=22.28 Aligned_cols=77 Identities=9% Similarity=0.124 Sum_probs=49.0
Q ss_pred CceEEEEEEEecCCCCcEEEEEEEe-----CCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCCceEEEEEEEEc
Q psy7211 171 ENLVTGTVKVRNLSFKKEVIIRYST-----NNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSAHQIEFCIAYKT 245 (312)
Q Consensus 171 ~~~L~GtV~V~NlafeK~V~VRyT~-----D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~~~iEFcIrY~~ 245 (312)
+..|.-.+|++.-.- ++|.|+|.- +.+.....+++..+.+. +..|-|.-+|.++ ..++.++..-.-
T Consensus 20 ~~~v~IRLRt~k~dv-~~V~l~~gD~y~~~~~~~~~~~~~M~k~~s~------~~fDywe~~i~~~--~~r~~Y~F~l~~ 90 (123)
T d1j0ha1 20 SETLHLRLRTKKDDI-DRVELLHGDPYDWQNGAWQFQMMPMRKTGSD------ELFDYWFAEVKPP--YRRLRYGFVLYS 90 (123)
T ss_dssp SSCEEEEEEEETTTC-SEEEEEEECTTCEETTEECCEEEECEEEEEC------SSEEEEEEEECCT--TSCEEEEEEEEE
T ss_pred CCEEEEEEEecCCCc-cEEEEEEcCcccccCCcCceEEEEEEEeecC------CceEEEEEEEECC--CCeEEEEEEEEc
Confidence 356777778775444 569998742 23333455566665443 3489988666654 456777766666
Q ss_pred CCceeeecCCC
Q psy7211 246 ENEEFWDNNNS 256 (312)
Q Consensus 246 ~g~eyWDNN~G 256 (312)
+++.+|=+..|
T Consensus 91 ~~~~~~y~~~G 101 (123)
T d1j0ha1 91 GEEKLVYTEKG 101 (123)
T ss_dssp TTEEEEEETTE
T ss_pred CCEEEEEcCCc
Confidence 77778877666
No 9
>d1g87a2 b.2.2.2 (A:457-614) Endo/exocellulase:cellobiose E-4, C-terminal domain {Clostridium cellulolyticum, atcc 35319 [TaxId: 1521]}
Probab=25.64 E-value=1.4e+02 Score=23.08 Aligned_cols=84 Identities=12% Similarity=0.179 Sum_probs=49.9
Q ss_pred CCceEEEEEEEecC-----CCCcEEEEEEEeC--------CCceeeEEEEEEeCCCCCC---C---CCcceeEEEEEEEc
Q psy7211 170 SENLVTGTVKVRNL-----SFKKEVIIRYSTN--------NWTTFTDVKCAYVPSATPS---S---ITIVYDTFAFQISI 230 (312)
Q Consensus 170 ~~~~L~GtV~V~Nl-----afeK~V~VRyT~D--------~W~T~~Dv~A~Yv~~~~~~---~---~~~~~D~FsF~i~L 230 (312)
....+..+++|.|- -....|.|||=|| -|.....+.|.|+...... + ...+.|.+ ..|.+
T Consensus 13 ~~~~~ei~~~i~N~sg~pa~~l~~l~~RYyft~d~~~~~~~~~d~~~~~~~~~~~~~~~~s~~~~~~~~~~~yY-vEi~f 91 (158)
T d1g87a2 13 GPNYTEIKAVVYNQTGWPARVTDKISFKYFMDLSEIVAAGIDPLSLVTSSNYSEGKNTKVSGVLPWDVSNNVYY-VNVDL 91 (158)
T ss_dssp ETTEEEEEEEEEECCCTTCCCBCSEEEEEEEECHHHHHTTCCGGGSEEEC-CBSSTTCEECCCEEEEGGGTEEE-EEEEC
T ss_pred CCCeEEEEEEEEECCCCCCeecCCeEEEEeEcCcCccccCCccceEEEeeeeeccccceecccccccCCCCcEE-EEEEe
Confidence 34678888999993 3456799999775 2777777888888754321 0 01223433 46665
Q ss_pred CC------CC----ceEEEEEEEEcCCceeeecCC
Q psy7211 231 PK------SA----HQIEFCIAYKTENEEFWDNNN 255 (312)
Q Consensus 231 p~------~~----~~iEFcIrY~~~g~eyWDNN~ 255 (312)
.. .. ..|||.|... ++..+||.-+
T Consensus 92 tg~~i~p~G~s~~~~evQ~ri~~~-~~s~~~dqsN 125 (158)
T d1g87a2 92 TGENIYPGGQSACRREVQFRIAAP-QGTTYWNPKN 125 (158)
T ss_dssp TTCCBCSSSTTTTEEEEEEEEECC-TTCCCCCGGG
T ss_pred cCCccccCCCCCCceEEEEEEEcc-CCccccccCC
Confidence 32 11 2578877652 3445788643
No 10
>d1yq2a4 b.30.5.1 (A:722-1023) beta-Galactosidase, domain 5 {Arthrobacter sp. c2-2 [TaxId: 192168]}
Probab=21.92 E-value=2.2e+02 Score=23.94 Aligned_cols=101 Identities=13% Similarity=0.136 Sum_probs=61.2
Q ss_pred hhcCCeEEEEEEEecCCceEEEEEEEecCCCCcEEEEEEEeCCCceeeEEEEEEeCCCCCCCCCcceeEEEEEEEcCCCC
Q psy7211 155 LDEGKVSLENVIVKESENLVTGTVKVRNLSFKKEVIIRYSTNNWTTFTDVKCAYVPSATPSSITIVYDTFAFQISIPKSA 234 (312)
Q Consensus 155 l~~q~V~LE~v~l~~~~~~L~GtV~V~NlafeK~V~VRyT~D~W~T~~Dv~A~Yv~~~~~~~~~~~~D~FsF~i~Lp~~~ 234 (312)
+....+.++.+...++...+..+....+....-.+..+|++++ . ...+...+....... ...=+|-..+.||...
T Consensus 86 ~~~~~~~~~~~~~~~~~v~v~~~~~~~~~~~~~~~~~~~~~~~-G-~i~v~~~~~~~~~~~---~~LPRiG~~~~Lp~~~ 160 (302)
T d1yq2a4 86 LDRLTRRVEDVAALPDGIRVRTRYAAADSTHSVAVEENWQLDG-G-ELCLRIDITPSAGWN---LVWPRIGVRWDLPTDV 160 (302)
T ss_dssp GGGEEEEEEEEEEETTEEEEEEEEEETTCSCCEEEEEEEEEET-T-EEEEEEEEEECTTCC---SCCSEEEEEEEECTTE
T ss_pred ccceEEEEEEEEEcCCcEEEEEEEEecCccceEEEEEEEEEcC-C-EEEEEEEEEecccCc---ccccceEEEEEecCcc
Confidence 3444566777777654445555555555666667777777765 3 334555555442211 1123888888998866
Q ss_pred ceEEEEEEEEcC-CceeeecCCCcceEEEe
Q psy7211 235 HQIEFCIAYKTE-NEEFWDNNNSKNYIIKK 263 (312)
Q Consensus 235 ~~iEFcIrY~~~-g~eyWDNN~G~NY~v~~ 263 (312)
.+++. |--+ +..|+|-+.|.-.-+-.
T Consensus 161 ~~v~w---yGrGP~EnY~DRk~sa~vG~Y~ 187 (302)
T d1yq2a4 161 DGAAW---FGAGPRESYPDSMHATMVARHA 187 (302)
T ss_dssp EEEEE---EEEESSCCBTTBCTTCEEEEEE
T ss_pred ceeEE---ECCCCCCCCCCccccccEeEEc
Confidence 66653 4443 68899999997655543
Done!