RPS-BLAST 2.2.26 [Sep-21-2011]

Database: scop70_1_75 
           13,730 sequences; 2,407,596 total letters

Searching..................................................done

Query= psy7211
         (312 letters)



>d2ogka1 d.77.1.2 (A:4-144) Hypothetical protein AF2318
           {Archaeoglobus fulgidus [TaxId: 2234]}
          Length = 141

 Score = 25.9 bits (57), Expect = 4.4
 Identities = 8/39 (20%), Positives = 18/39 (46%)

Query: 154 RLDEGKVSLENVIVKESENLVTGTVKVRNLSFKKEVIIR 192
           R+D+ K  L  V +    + +   +++     K+E +I 
Sbjct: 96  RIDKQKAYLGEVSLTSGGDPIAVKLRLVTYPSKREKVIE 134


  Database: scop70_1_75
    Posted date:  Mar 27, 2010  6:21 PM
  Number of letters in database: 2,407,596
  Number of sequences in database:  13,730
  
Lambda     K      H
   0.316    0.132    0.401 

Gapped
Lambda     K      H
   0.267   0.0665    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 1,188,288
Number of extensions: 54594
Number of successful extensions: 96
Number of sequences better than 10.0: 1
Number of HSP's gapped: 96
Number of HSP's successfully gapped: 7
Length of query: 312
Length of database: 2,407,596
Length adjustment: 85
Effective length of query: 227
Effective length of database: 1,240,546
Effective search space: 281603942
Effective search space used: 281603942
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 53 (24.3 bits)