RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy7212
(75 letters)
>d2d81a1 c.69.1.37 (A:21-338) Polyhydroxybutyrate depolymerase
{Penicillium funiculosum [TaxId: 28572]}
Length = 318
Score = 39.7 bits (92), Expect = 6e-06
Identities = 6/41 (14%), Positives = 14/41 (34%)
Query: 26 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 66
+ + + + G + GG +A + Y + P
Sbjct: 7 NVNPNSVSVSGLASGGYMAAQLGVAYSDVFNVGFGVFAGGP 47
>d1fj2a_ c.69.1.14 (A:) Acyl protein thioesterase 1 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 229
Score = 37.7 bits (86), Expect = 3e-05
Identities = 37/58 (63%), Positives = 45/58 (77%)
Query: 15 KHRYFCEEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFP 72
+EV GIPS+RI++GGFSQGGAL+LY+ALT +KLAGV ALSCWLP+ SFP
Sbjct: 96 IKALIDQEVKNGIPSNRIILGGFSQGGALSLYTALTTQQKLAGVTALSCWLPLRASFP 153
>d1dqza_ c.69.1.3 (A:) Antigen 85c {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 280
Score = 34.1 bits (77), Expect = 5e-04
Identities = 10/33 (30%), Positives = 13/33 (39%)
Query: 30 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 62
G S G AL A YP++ +LS
Sbjct: 114 TGNAAVGLSMSGGSALILAAYYPQQFPYAASLS 146
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 34.0 bits (77), Expect = 6e-04
Identities = 12/59 (20%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Query: 9 PGIGKVKHRY-----FCEEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALS 62
+ + R EE+ A ++ + G S GG Y A P +A ++
Sbjct: 48 SQLDTSEVRGEQLLQQVEEIVALSGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVG 106
>d1r88a_ c.69.1.3 (A:) Antigen pt51/mpb51 {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 267
Score = 33.7 bits (76), Expect = 7e-04
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 30 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 62
G +QGG A+ A +P + ++S
Sbjct: 105 GGHAAVGAAQGGYGAMALAAFHPDRFGFAGSMS 137
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 33.5 bits (75), Expect = 8e-04
Identities = 9/43 (20%), Positives = 14/43 (32%)
Query: 26 GIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 68
G+ D G+S G L L +P + L +
Sbjct: 100 GLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAALLRPMPVLD 142
>d1sfra_ c.69.1.3 (A:) Antigen 85a {Mycobacterium tuberculosis
[TaxId: 1773]}
Length = 288
Score = 32.3 bits (72), Expect = 0.003
Identities = 8/33 (24%), Positives = 15/33 (45%)
Query: 30 DRIVIGGFSQGGALALYSALTYPKKLAGVVALS 62
+ G S + AL A+ +P++ A+S
Sbjct: 119 TGSAVVGLSMAASSALTLAIYHPQQFVYAGAMS 151
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
antarctica), form b [TaxId: 34362]}
Length = 317
Score = 29.3 bits (65), Expect = 0.024
Identities = 10/49 (20%), Positives = 24/49 (48%), Gaps = 3/49 (6%)
Query: 17 RYFCEEVSAGIPSDRIVIGGFSQGGALALYSALTYP---KKLAGVVALS 62
+ AG ++++ + +SQGG +A + +P K+ ++A +
Sbjct: 84 VNAITALYAGSGNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFA 132
>d1cexa_ c.69.1.30 (A:) Cutinase {Fungus (Fusarium solani), subsp.
pisi [TaxId: 169388]}
Length = 197
Score = 28.0 bits (62), Expect = 0.075
Identities = 14/42 (33%), Positives = 20/42 (47%), Gaps = 4/42 (9%)
Query: 22 EVSAGIPSDRIVIGGFSQGGALALYSALTYP----KKLAGVV 59
+ + P ++ GG+SQG ALA S K+AG V
Sbjct: 88 QANTKCPDATLIAGGYSQGAALAAASIEDLDSAIRDKIAGTV 129
>gi|115385463|ref|XP_001209278.1|(7-278:285) hypothetical protein
ATEG_09976 [Aspergillus terreus NIH2624]
gi|114187725|gb|EAU29425.1| hypothetical protein
ATEG_09976 [Aspergillus terreus NIH2624] E=1e-100
s/c=1.35 id=66% cov=100%
Length = 272
Score = 27.3 bits (60), Expect = 0.14
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 28 PSDRIVIGGFSQGGALALYSAL 49
P +V+ G S G A+A +A
Sbjct: 135 PDYELVVVGHSLGAAVATLAAA 156
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 27.0 bits (58), Expect = 0.20
Identities = 7/49 (14%), Positives = 14/49 (28%)
Query: 20 CEEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 68
E + + + G S G +A + + + PM
Sbjct: 95 VAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPMK 143
>d1qoza_ c.69.1.30 (A:) Acetylxylan esterase {Trichoderma reesei
[TaxId: 51453]}
Length = 207
Score = 25.8 bits (56), Expect = 0.44
Identities = 8/46 (17%), Positives = 16/46 (34%)
Query: 21 EEVSAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLP 66
P ++V+ G+SQG + + G+ + L
Sbjct: 73 NNFHNSCPDTQLVLVGYSQGAQIFDNALCGGGDPGEGITNTAVPLT 118
>d1jjfa_ c.69.1.2 (A:) Feruloyl esterase domain of the cellulosomal
xylanase z {Clostridium thermocellum [TaxId: 1515]}
Length = 255
Score = 25.4 bits (54), Expect = 0.61
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 32 IVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMH 68
I G S GG + LT K A + +S +
Sbjct: 137 RAIAGLSMGGGQSFNIGLTNLDKFAYIGPISAAPNTY 173
>d2nvma1 d.326.1.1 (A:2-118) XisI {Anabaena variabilis [TaxId:
1172]}
Length = 117
Score = 25.2 bits (55), Expect = 0.65
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 21 EEVSAGIPSDRIVIG 35
E + AGIP I++G
Sbjct: 95 EMLVAGIPQTDIILG 109
>d2nlva1 d.326.1.1 (A:1-111) Hypothetical protein Ava3825
{Anabaena variabilis [TaxId: 1172]}
Length = 111
Score = 25.0 bits (55), Expect = 0.77
Identities = 7/15 (46%), Positives = 10/15 (66%)
Query: 21 EEVSAGIPSDRIVIG 35
E V G+P + IV+G
Sbjct: 82 ELVMMGVPREDIVLG 96
>d2nwva1 d.326.1.1 (A:2-113) Hypothetical protein Ava3320
{Anabaena variabilis [TaxId: 1172]}
Length = 112
Score = 24.7 bits (54), Expect = 0.84
Identities = 4/15 (26%), Positives = 9/15 (60%)
Query: 21 EEVSAGIPSDRIVIG 35
E + G+ ++ IV+
Sbjct: 83 ELMRLGVTNNDIVLA 97
>d1g66a_ c.69.1.30 (A:) Acetylxylan esterase {Penicillium
purpurogenum [TaxId: 28575]}
Length = 207
Score = 25.0 bits (54), Expect = 0.98
Identities = 9/24 (37%), Positives = 15/24 (62%)
Query: 21 EEVSAGIPSDRIVIGGFSQGGALA 44
++ PS +IV+ G+SQGG +
Sbjct: 73 NSFNSQCPSTKIVLVGYSQGGEIM 96
>d1bg6a1 a.100.1.5 (A:188-359) N-(1-D-carboxylethyl)-L-norvaline
dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Length = 172
Score = 24.8 bits (54), Expect = 1.2
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 4 AHEQGPGIGKVKHRYFCEEVSAGI 27
A+ G + RYF E+VS G+
Sbjct: 92 AYRGIAGPINLNTRYFFEDVSTGL 115
>d1bu8a2 c.69.1.19 (A:1-336) Pancreatic lipase, N-terminal domain
{Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 338
Score = 24.7 bits (53), Expect = 1.3
Identities = 8/52 (15%), Positives = 16/52 (30%)
Query: 24 SAGIPSDRIVIGGFSQGGALALYSALTYPKKLAGVVALSCWLPMHKSFPAET 75
G + + + G S G + + + + L P + P E
Sbjct: 140 EMGYSPENVHLIGHSLGAHVVGEAGRRLEGHVGRITGLDPAEPCFQGLPEEV 191
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 24.5 bits (52), Expect = 1.4
Identities = 3/27 (11%), Positives = 6/27 (22%)
Query: 28 PSDRIVIGGFSQGGALALYSALTYPKK 54
+ I + S +A
Sbjct: 101 GTQNIGLIAASLSARVAYEVISDLELS 127
>d1lgya_ c.69.1.17 (A:) Triacylglycerol lipase {Rhizopus niveus
[TaxId: 4844]}
Length = 265
Score = 24.0 bits (51), Expect = 2.3
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 20 CEEVSAGIPSDRIVIGGFSQGGALALYSAL 49
+E P+ ++++ G S GGA AL + +
Sbjct: 123 VQEQLTAHPTYKVIVTGHSLGGAQALLAGM 152
>d1n62b2 d.133.1.1 (B:147-809) Carbon monoxide (CO) dehydrogenase
molybdoprotein {Oligotropha carboxidovorans, formerly
Pseudomonas carboxydovorans [TaxId: 40137]}
Length = 663
Score = 23.8 bits (50), Expect = 2.6
Identities = 6/22 (27%), Positives = 13/22 (59%)
Query: 33 VIGGFSQGGALALYSALTYPKK 54
V GG ++ A+A+ + Y ++
Sbjct: 553 VHGGLTEAFAVAMGQEIRYDEQ 574
>d1v97a5 d.133.1.1 (A:695-1332) Xanthine oxidase, C-terminal domain
{Cow (Bos taurus) [TaxId: 9913]}
Length = 638
Score = 23.0 bits (48), Expect = 5.2
Identities = 8/19 (42%), Positives = 8/19 (42%)
Query: 33 VIGGFSQGGALALYSALTY 51
V G F QG L L Y
Sbjct: 501 VEGAFVQGLGLFTLEELHY 519
>d1t3qb2 d.133.1.1 (B:166-786) Quinoline 2-oxidoreductase large
subunit QorL {Pseudomonas putida [TaxId: 303]}
Length = 621
Score = 23.0 bits (48), Expect = 5.3
Identities = 5/19 (26%), Positives = 8/19 (42%)
Query: 33 VIGGFSQGGALALYSALTY 51
+ GG +Q L + Y
Sbjct: 514 IRGGIAQAIGQTLLEEVIY 532
>d1lzla_ c.69.1.2 (A:) Heroin esterase {Rhodococcus sp. [TaxId:
1831]}
Length = 317
Score = 22.9 bits (47), Expect = 5.8
Identities = 12/27 (44%), Positives = 14/27 (51%)
Query: 26 GIPSDRIVIGGFSQGGALALYSALTYP 52
GI RI +GG S GG LA + L
Sbjct: 147 GIDPSRIAVGGQSAGGGLAAGTVLKAR 173
>d1ffvb2 d.133.1.1 (B:147-803) Carbon monoxide (CO) dehydrogenase
molybdoprotein {Hydrogenophaga pseudoflava [TaxId:
47421]}
Length = 657
Score = 23.1 bits (48), Expect = 5.8
Identities = 5/19 (26%), Positives = 12/19 (63%)
Query: 33 VIGGFSQGGALALYSALTY 51
+ GG ++G A+A+ + +
Sbjct: 547 IHGGLTEGYAVAMGQQMPF 565
>d1ei9a_ c.69.1.13 (A:) Palmitoyl protein thioesterase 1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 279
Score = 22.6 bits (48), Expect = 6.0
Identities = 9/48 (18%), Positives = 17/48 (35%), Gaps = 2/48 (4%)
Query: 17 RYFCEEVSA-GIPSDRIVIGGFSQGGALALYSALTYPK-KLAGVVALS 62
C+ ++ GFSQGG A P + ++++
Sbjct: 66 TTVCQILAKDPKLQQGYNAMGFSQGGQFLRAVAQRCPSPPMVNLISVG 113
>d1rm6a2 d.133.1.1 (A:134-769) 4-hydroxybenzoyl-CoA reductase alpha
subunit HrcA, C-terminal domain {Thauera aromatica
[TaxId: 59405]}
Length = 636
Score = 22.7 bits (47), Expect = 7.1
Identities = 6/19 (31%), Positives = 6/19 (31%)
Query: 33 VIGGFSQGGALALYSALTY 51
GG G AL Y
Sbjct: 530 TQGGVWMGMGQALSEETVY 548
>d1jrob2 d.133.1.1 (B:124-777) Xanthine dehydrogenase chain B,
C-terminal domain {Rhodobacter capsulatus [TaxId: 1061]}
Length = 654
Score = 22.6 bits (47), Expect = 8.4
Identities = 4/19 (21%), Positives = 7/19 (36%)
Query: 33 VIGGFSQGGALALYSALTY 51
+ G + QG L +
Sbjct: 541 IEGAYVQGAGWLTTEELVW 559
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.322 0.138 0.440
Gapped
Lambda K H
0.267 0.0413 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 287,574
Number of extensions: 10856
Number of successful extensions: 69
Number of sequences better than 10.0: 1
Number of HSP's gapped: 69
Number of HSP's successfully gapped: 33
Length of query: 75
Length of database: 2,407,596
Length adjustment: 42
Effective length of query: 33
Effective length of database: 1,830,936
Effective search space: 60420888
Effective search space used: 60420888
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 47 (22.7 bits)