BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7218
(93 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P38942|CAT2_CLOK5 4-hydroxybutyrate coenzyme A transferase OS=Clostridium kluyveri
(strain ATCC 8527 / DSM 555 / NCIMB 10680) GN=cat2 PE=3
SV=3
Length = 429
Score = 63.2 bits (152), Expect = 4e-10, Method: Composition-based stats.
Identities = 31/47 (65%), Positives = 35/47 (74%)
Query: 33 GAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREAL 79
GA V T+R V YVVTE+G+A L GKTLR RA ALINIA P RE+L
Sbjct: 375 GAAVTTSRNEVDYVVTEYGVAHLKGKTLRNRARALINIAHPKFRESL 421
>sp|P10648|GSTA2_MOUSE Glutathione S-transferase A2 OS=Mus musculus GN=Gsta2 PE=1 SV=3
Length = 222
Score = 32.7 bits (73), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 18/77 (23%)
Query: 27 PDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRA------HALINIA--------- 71
P ++ G +V TRA ++Y+ T++ L+GK +++RA ++++
Sbjct: 56 PMVEIDGMKLVQTRAILNYIATKYD---LYGKDMKERALIDMYTEGILDLTEMIGQLVLC 112
Query: 72 PPDHREALEKAAFERLK 88
PPD REA A +R K
Sbjct: 113 PPDQREAKTALAKDRTK 129
>sp|P04903|GSTA2_RAT Glutathione S-transferase alpha-2 OS=Rattus norvegicus GN=Gsta2
PE=2 SV=2
Length = 222
Score = 32.0 bits (71), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 38/79 (48%), Gaps = 22/79 (27%)
Query: 27 PDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHALIN----------------- 69
P ++ G + TRA ++Y+ T++ L+GK +++RA LI+
Sbjct: 56 PMVEIDGMKLAQTRAILNYIATKYD---LYGKDMKERA--LIDMYSEGILDLTEMIIQLV 110
Query: 70 IAPPDHREALEKAAFERLK 88
I PPD REA A +R K
Sbjct: 111 ICPPDQREAKTALAKDRTK 129
>sp|P14137|CP11A_RAT Cholesterol side-chain cleavage enzyme, mitochondrial OS=Rattus
norvegicus GN=Cyp11a1 PE=2 SV=1
Length = 526
Score = 31.6 bits (70), Expect = 1.6, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 14 PFQVLFQASDSGRPDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQR 63
P VLF++SD+ R DR +L V+ + ++V G+A F K L +R
Sbjct: 134 PIGVLFKSSDAWRKDRIVLNQEVMAPDSIKNFVPLLEGVAQDFIKVLHRR 183
>sp|P13745|GSTA1_MOUSE Glutathione S-transferase A1 OS=Mus musculus GN=Gsta1 PE=1 SV=2
Length = 223
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 38/77 (49%), Gaps = 18/77 (23%)
Query: 27 PDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRA------HALINIA--------- 71
P ++ G + TRA ++Y+ T++ L+GK +++RA ++++
Sbjct: 56 PMVEIDGMKLAQTRAILNYIATKYD---LYGKDMKERALIDMYSEGILDLTEMIGQLVLC 112
Query: 72 PPDHREALEKAAFERLK 88
PPD REA A +R K
Sbjct: 113 PPDQREAKTALAKDRTK 129
>sp|Q6C3Z9|ACH1_YARLI Acetyl-CoA hydrolase OS=Yarrowia lipolytica (strain CLIB 122 / E
150) GN=ACH1 PE=3 SV=1
Length = 524
Score = 31.2 bits (69), Expect = 2.2, Method: Composition-based stats.
Identities = 19/45 (42%), Positives = 28/45 (62%), Gaps = 5/45 (11%)
Query: 46 VVTEHGIAFLFGKTLRQRAHALIN-IAPPDHREAL----EKAAFE 85
VVTE G+A L G + ++R+ +IN A P +R+ L E+A FE
Sbjct: 446 VVTEQGLADLRGLSPKERSREMINKCAHPSYRDQLLAYVEQAEFE 490
>sp|Q9QZ82|CP11A_MOUSE Cholesterol side-chain cleavage enzyme, mitochondrial OS=Mus
musculus GN=Cyp11a1 PE=2 SV=1
Length = 526
Score = 30.8 bits (68), Expect = 2.2, Method: Composition-based stats.
Identities = 18/50 (36%), Positives = 28/50 (56%)
Query: 14 PFQVLFQASDSGRPDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQR 63
P VLF++SD+ + DR +L V+ A ++V G+A F K L +R
Sbjct: 133 PIGVLFKSSDAWKKDRIVLNQEVMAPGAIKNFVPLLEGVAQDFIKVLHRR 182
>sp|P38946|CAT1_CLOK5 Succinyl-CoA:coenzyme A transferase OS=Clostridium kluyveri (strain
ATCC 8527 / DSM 555 / NCIMB 10680) GN=cat1 PE=2 SV=1
Length = 538
Score = 30.8 bits (68), Expect = 2.5, Method: Composition-based stats.
Identities = 17/42 (40%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 39 TRAHVHYVVTEHGIAFLFGKTLRQRAHALI-NIAPPDHREAL 79
T V +VTE G+A L G + R++A A+I N PD+++ L
Sbjct: 461 TEHDVMVIVTEQGVADLRGLSPREKAVAIIENCVHPDYKDML 502
>sp|O15217|GSTA4_HUMAN Glutathione S-transferase A4 OS=Homo sapiens GN=GSTA4 PE=1 SV=1
Length = 222
Score = 30.8 bits (68), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 3/38 (7%)
Query: 27 PDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRA 64
P ++ G +V TR+ +HY+ +H LFGK L++R
Sbjct: 56 PMVEIDGMKLVQTRSILHYIADKHN---LFGKNLKERT 90
>sp|Q1GJD0|SYH_RUEST Histidine--tRNA ligase OS=Ruegeria sp. (strain TM1040) GN=hisS
PE=3 SV=1
Length = 500
Score = 29.6 bits (65), Expect = 5.4, Method: Composition-based stats.
Identities = 17/47 (36%), Positives = 24/47 (51%), Gaps = 3/47 (6%)
Query: 47 VTEHGIAFLFGKTLRQRAHALINIAPPDHR---EALEKAAFERLKVM 90
+T G FG+ + QR H L IA H EALE +A E ++ +
Sbjct: 13 ITPKGFRDYFGEEVTQRTHMLATIAEVYHHYGFEALESSAVETVEAL 59
>sp|P15937|ACH1_NEUCR Acetyl-CoA hydrolase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=acu-8
PE=3 SV=2
Length = 525
Score = 29.6 bits (65), Expect = 5.9, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 28/48 (58%)
Query: 39 TRAHVHYVVTEHGIAFLFGKTLRQRAHALINIAPPDHREALEKAAFER 86
T + +VTE+G+A + G + R+RA +I+ D + + KA FE+
Sbjct: 440 TEHDLDVIVTENGLADVRGLSPRERARVIIDKCAHDVYKPILKAYFEK 487
>sp|B8EKI5|CYSI_METSB Sulfite reductase [NADPH] hemoprotein beta-component
OS=Methylocella silvestris (strain BL2 / DSM 15510 /
NCIMB 13906) GN=cysI PE=3 SV=1
Length = 578
Score = 29.6 bits (65), Expect = 6.4, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%)
Query: 12 FFPFQVLFQASDSGRPDRQLLGAGVVTTRAHVHYVVTEHGIAFLFGKTLRQRAHAL 67
F P + + A+D+ ++ G V A Y + HG+ F+ G+ R+ +AL
Sbjct: 283 FIPKEQILAATDAVVGTQRDFGDRTVRAHARFKYTIDTHGLDFIQGEIERRLGYAL 338
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.329 0.139 0.432
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 32,776,421
Number of Sequences: 539616
Number of extensions: 1121040
Number of successful extensions: 2978
Number of sequences better than 100.0: 12
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 2972
Number of HSP's gapped (non-prelim): 12
length of query: 93
length of database: 191,569,459
effective HSP length: 63
effective length of query: 30
effective length of database: 157,573,651
effective search space: 4727209530
effective search space used: 4727209530
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 55 (25.8 bits)