BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7219
(288 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O35600|ABCA4_MOUSE Retinal-specific ATP-binding cassette transporter OS=Mus musculus
GN=Abca4 PE=2 SV=1
Length = 2310
Score = 241 bits (616), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 133/288 (46%), Positives = 184/288 (63%), Gaps = 9/288 (3%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
+D++ Y S+ LVV IF+ F+++AY SP NLP LV+LL+ YG AVIP+MYP SF+F VPS
Sbjct: 1729 WDIMNYAVSAGLVVGIFIGFQKKAYTSPDNLPALVSLLMLYGWAVIPMMYPASFLFEVPS 1788
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNLQDD-TLEYVNQYLKVIFLIFPHFCLGEGLMKLA 122
TA+V L C NLF+G+ ++ VL+ +++ TL N L+ + ++FPHFCLG GL+ LA
Sbjct: 1789 TAYVALSCANLFIGINSSAITFVLELFENNRTLLRFNAMLRKLLIVFPHFCLGRGLIDLA 1848
Query: 123 NTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTR- 181
+ + +G A N + W +IGKNL MA G +Y + L I++ F TR
Sbjct: 1849 LSQAVTDVYAQFGEEYSA-NPFQWDLIGKNLVAMAIEGVVYFLLTLLIQHHFF---LTRW 1904
Query: 182 -SNPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVG 240
+ P PV E+DDV +ER+RV G + D+L + L K+Y+ S + PAV+++ GV
Sbjct: 1905 IAEPAREPVFDEDDDVAEERQRVMSGGNKTDILKLNELTKVYSGS--SSPAVDRLCVGVR 1962
Query: 241 RGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
GECFGLLG+NGAGKTTTFKMLTG TSG+A V SI S+ V
Sbjct: 1963 PGECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSILTSISDVH 2010
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 215 VKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY 274
VK L K++ S +PAV++++ + LG NGAGKTTT +LTG + PTSG
Sbjct: 931 VKNLVKVFEPSG--RPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVL 988
Query: 275 VMNHSIRDSMDLVR 288
+ I ++D+VR
Sbjct: 989 IGGKDIETNLDVVR 1002
>sp|Q91V24|ABCA7_MOUSE ATP-binding cassette sub-family A member 7 OS=Mus musculus GN=Abca7
PE=1 SV=1
Length = 2159
Score = 240 bits (613), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 184/278 (66%), Gaps = 6/278 (2%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
+D+ Y + +VVFIFLAF++ AY++P+NLP L+ LLL YG ++ PLMYP SF FSVPS
Sbjct: 1600 WDMCNYLVAVCIVVFIFLAFQQRAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPS 1659
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKLAN 123
TA+VVL C NLF+G+ +++ VL+ L D L+ V++ LK +FLIFPHFCLG GL+ +
Sbjct: 1660 TAYVVLTCINLFIGINSSMATFVLELLSDQNLQEVSRILKQVFLIFPHFCLGRGLIDMVR 1719
Query: 124 TYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSN 183
+ G + + W +IGKNL M G L+ I L ++++ +R +S
Sbjct: 1720 NQAMADAFERLGDKQFQSPL-RWDIIGKNLLAMMAQGPLFLLITLLLQHR--NRLLPQSK 1776
Query: 184 PHPVPVSLEED-DVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRG 242
P +P EED DV +ERERV +GA GDVLV++ L K+Y ++ PAV+++ G+ G
Sbjct: 1777 PRLLPPLGEEDEDVAQERERVTKGATQGDVLVLRDLTKVYRGQRN--PAVDRLCLGIPPG 1834
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
ECFGLLG+NGAGKT+TF+M+TG P+SG A + H++
Sbjct: 1835 ECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGHNV 1872
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
+PA+ ++ G LG NGAGKTTT +L+G P+SG+A ++ H ++ +M +R
Sbjct: 818 QPALQGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASILGHDVQTNMAAIR 877
>sp|Q7TNJ2|ABCA7_RAT ATP-binding cassette sub-family A member 7 OS=Rattus norvegicus
GN=Abca7 PE=1 SV=1
Length = 2170
Score = 236 bits (601), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 124/278 (44%), Positives = 181/278 (65%), Gaps = 6/278 (2%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
+D+ Y + +VV IFLAF+++AY++P+NLP L+ LLL YG ++ PLMYP SF FSVPS
Sbjct: 1611 WDMCNYLVAVCIVVLIFLAFQQKAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPS 1670
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKLAN 123
TA+VVL C NLF+G+ +++ VL+ L D L+ V++ LK +FLIFPHFCLG GL+ +
Sbjct: 1671 TAYVVLTCINLFIGINSSMATFVLELLSDQNLQEVSRILKQVFLIFPHFCLGRGLIDMVR 1730
Query: 124 TYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSN 183
+ G + + W +IGKNL M G L+ I L ++++ +R +
Sbjct: 1731 NQAMADAFERLGDKQFQSPL-RWDIIGKNLLAMVAQGPLFLLITLLLQHR--NRLLPQPK 1787
Query: 184 PH-PVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRG 242
P P+ E++DV +ERERV +GA GDVLV++ L K+Y + PAV+ + G+ G
Sbjct: 1788 SRLPPPLGEEDEDVVRERERVTKGATQGDVLVLRDLTKVYRGQR--SPAVDHLCLGIPPG 1845
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
ECFGLLG+NGAGKT+TF+M+TG P+SG A + H++
Sbjct: 1846 ECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGHNV 1883
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
+PA+ ++ G LG NGAGKTTT +L+G P+SG+A ++ H ++ +M +R
Sbjct: 819 QPALRGLNLDFYEGHITAFLGHNGAGKTTTLSILSGLFPPSSGSASILGHDVQTNMAAIR 878
>sp|O95477|ABCA1_HUMAN ATP-binding cassette sub-family A member 1 OS=Homo sapiens GN=ABCA1
PE=1 SV=3
Length = 2261
Score = 224 bits (572), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 179/284 (63%), Gaps = 14/284 (4%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
+ +D+ Y +TLV+ IF+ F++++Y+S NLP L LLL YG ++ PLMYP SF+F +
Sbjct: 1703 FVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKI 1762
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKL 121
PSTA+VVL NLF+G+ ++ VL+ D+ L +N LK +FLIFPHFCLG GL+ +
Sbjct: 1763 PSTAYVVLTSVNLFIGINGSVATFVLELFTDNKLNNINDILKSVFLIFPHFCLGRGLIDM 1822
Query: 122 ANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTR 181
+ +G V+ +W ++G+NL MA G ++ I + I+Y+ F R
Sbjct: 1823 VKNQAMADALERFGENRF-VSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIR---- 1877
Query: 182 SNPHPV-----PVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQIS 236
P PV P++ E++DVR+ER+R+ G D+L +K L KIY + KPAV++I
Sbjct: 1878 --PRPVNAKLSPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYRRKR--KPAVDRIC 1933
Query: 237 FGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
G+ GECFGLLG+NGAGK++TFKMLTG T G+A++ +SI
Sbjct: 1934 VGIPPGECFGLLGVNGAGKSSTFKMLTGDTTVTRGDAFLNKNSI 1977
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 215 VKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY 274
++ L K+Y + K AV+ ++ G+ LG NGAGKTTT +LTG PTSG AY
Sbjct: 901 IQNLVKVYRDG--MKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 958
Query: 275 VMNHSIRDSMDLVR 288
++ IR M +R
Sbjct: 959 ILGKDIRSEMSTIR 972
>sp|P41233|ABCA1_MOUSE ATP-binding cassette sub-family A member 1 OS=Mus musculus GN=Abca1
PE=1 SV=4
Length = 2261
Score = 224 bits (571), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 121/284 (42%), Positives = 179/284 (63%), Gaps = 14/284 (4%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
+ +D+ Y +TLV+ IF+ F++++Y+S NLP L LLL YG ++ PLMYP SF+F +
Sbjct: 1703 FVWDMCNYVVPATLVIIIFICFQQKSYVSSTNLPVLALLLLLYGWSITPLMYPASFVFKI 1762
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKL 121
PSTA+VVL NLF+G+ ++ VL+ ++ L +N LK +FLIFPHFCLG GL+ +
Sbjct: 1763 PSTAYVVLTSVNLFIGINGSVATFVLELFTNNKLNDINDILKSVFLIFPHFCLGRGLIDM 1822
Query: 122 ANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTR 181
+ +G V+ +W ++G+NL MA G ++ I + I+Y+ F R
Sbjct: 1823 VKNQAMADALERFGENRF-VSPLSWDLVGRNLFAMAVEGVVFFLITVLIQYRFFIR---- 1877
Query: 182 SNPHPV-----PVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQIS 236
P PV P++ E++DVR+ER+R+ G D+L +K L KIY + KPAV++I
Sbjct: 1878 --PRPVKAKLPPLNDEDEDVRRERQRILDGGGQNDILEIKELTKIYRRKR--KPAVDRIC 1933
Query: 237 FGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
G+ GECFGLLG+NGAGK+TTFKMLTG T G+A++ +SI
Sbjct: 1934 IGIPPGECFGLLGVNGAGKSTTFKMLTGDTPVTRGDAFLNKNSI 1977
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 215 VKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY 274
++ L K+Y + K AV+ ++ G+ LG NGAGKTTT +LTG PTSG AY
Sbjct: 901 IQNLVKVYRDG--MKVAVDGLALNFYEGQITSFLGHNGAGKTTTMSILTGLFPPTSGTAY 958
Query: 275 VMNHSIRDSMDLVR 288
++ IR M +R
Sbjct: 959 ILGKDIRSEMSSIR 972
>sp|P78363|ABCA4_HUMAN Retinal-specific ATP-binding cassette transporter OS=Homo sapiens
GN=ABCA4 PE=1 SV=3
Length = 2273
Score = 218 bits (555), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 126/278 (45%), Positives = 179/278 (64%), Gaps = 5/278 (1%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
+D++ Y+ S+ LVV IF+ F+++AY SP+NLP LVALLL YG AVIP+MYP SF+F VPS
Sbjct: 1730 WDIMNYSVSAGLVVGIFIGFQKKAYTSPENLPALVALLLLYGWAVIPMMYPASFLFDVPS 1789
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNLQDD-TLEYVNQYLKVIFLIFPHFCLGEGLMKLA 122
TA+V L C NLF+G+ ++ +L+ +++ TL N L+ + ++FPHFCLG GL+ LA
Sbjct: 1790 TAYVALSCANLFIGINSSAITFILELFENNRTLLRFNAVLRKLLIVFPHFCLGRGLIDLA 1849
Query: 123 NTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRS 182
+ + +G A N + W +IGKNL M G +Y + L ++ F + +
Sbjct: 1850 LSQAVTDVYARFGEEHSA-NPFHWDLIGKNLFAMVVEGVVYFLLTLLVQRHFFLSQWI-A 1907
Query: 183 NPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRG 242
P P+ E+DDV +ER+R+ G + D+L + L KIY + + PAV+++ GV G
Sbjct: 1908 EPTKEPIVDEDDDVAEERQRIITGGNKTDILRLHELTKIYPGT--SSPAVDRLCVGVRPG 1965
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
ECFGLLG+NGAGKTTTFKMLTG TSG+A V SI
Sbjct: 1966 ECFGLLGVNGAGKTTTFKMLTGDTTVTSGDATVAGKSI 2003
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 215 VKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY 274
VK L KI+ +PAV++++ + LG NGAGKTTT +LTG + PTSG
Sbjct: 931 VKNLVKIFEPCG--RPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLPPTSGTVL 988
Query: 275 VMNHSIRDSMDLVR 288
V I S+D VR
Sbjct: 989 VGGRDIETSLDAVR 1002
>sp|Q8IZY2|ABCA7_HUMAN ATP-binding cassette sub-family A member 7 OS=Homo sapiens GN=ABCA7
PE=1 SV=3
Length = 2146
Score = 213 bits (543), Expect = 9e-55, Method: Composition-based stats.
Identities = 122/280 (43%), Positives = 176/280 (62%), Gaps = 6/280 (2%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
+ +D+ Y + +VV IFLAF++ AY++P NLP L+ LLL YG ++ PLMYP SF FSV
Sbjct: 1584 FLWDMCNYLVPACIVVLIFLAFQQRAYVAPANLPALLLLLLLYGWSITPLMYPASFFFSV 1643
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKL 121
PSTA+VVL C NLF+G+ ++ VL+ D L+ V++ LK +FLIFPHFCLG GL+ +
Sbjct: 1644 PSTAYVVLTCINLFIGINGSMATFVLELFSDQKLQEVSRILKQVFLIFPHFCLGRGLIDM 1703
Query: 122 ANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTR 181
+ G R + W ++GKNL M G L+ L ++++ S+ +
Sbjct: 1704 VRNQAMADAFERLGDRQFQSPL-RWEVVGKNLLAMVIQGPLFLLFTLLLQHR--SQLLPQ 1760
Query: 182 SNPHPVPVSLEED-DVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVG 240
+P+ EED DV +ERERV +GA GDVLV++ L K+Y + PAV+++ G+
Sbjct: 1761 PRVRSLPLLGEEDEDVARERERVVQGATQGDVLVLRNLTKVYRGQR--MPAVDRLCLGIP 1818
Query: 241 RGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
GECFGLLG+NGAGKT+TF+M+TG + G A + HS+
Sbjct: 1819 PGECFGLLGVNGAGKTSTFRMVTGDTLASRGEAVLAGHSV 1858
Score = 59.3 bits (142), Expect = 3e-08, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 54/106 (50%), Gaps = 7/106 (6%)
Query: 183 NPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRG 242
+P P P L D + E G G + V+ L K + S +PA+ +S +G
Sbjct: 782 SPAPCPTPL---DPKVLVEEAPPGLSPG--VSVRSLEKRFPGSP--QPALRGLSLDFYQG 834
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
LG NGAGKTTT +L+G P+ G+A+++ H +R SM +R
Sbjct: 835 HITAFLGHNGAGKTTTLSILSGLFPPSGGSAFILGHDVRSSMAAIR 880
>sp|Q9BZC7|ABCA2_HUMAN ATP-binding cassette sub-family A member 2 OS=Homo sapiens GN=ABCA2
PE=1 SV=3
Length = 2435
Score = 197 bits (502), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 164/285 (57%), Gaps = 12/285 (4%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
Y +D+L Y +T V I F AY SP N P +++L L YG ++ P+MYP SF F V
Sbjct: 1840 YVWDMLNYLVPATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEV 1899
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQ-DDTLEYVNQYLKVIFLIFPHFCLGEGLMK 120
PS+A+V L NLF+G+ T+ +L + D L+ VN YLK FLIFP++ LG GLM+
Sbjct: 1900 PSSAYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLME 1959
Query: 121 LANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFT 180
+A + + + G + + W ++ + L MA G + + + +Y R
Sbjct: 1960 MAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMAVEGVVGFLLTIMCQYNFLRR--- 2016
Query: 181 RSNPHPVPVS---LEED-DVRKERERVERGADSGDVLVVKRLFKIYANSKDTKP-AVNQI 235
P +PVS +E+D DV ER+RV RG D++ ++ L K+Y + K + AV+++
Sbjct: 2017 ---PQRMPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRL 2073
Query: 236 SFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
GV GECFGLLG+NGAGKT+TFKMLTG T G A+V HS+
Sbjct: 2074 CLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSV 2118
Score = 67.0 bits (162), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
Query: 191 LEEDDV-RKERERVE--RGADSGD-----VLVVKRLFKIYANSKDTKPAVNQISFGVGRG 242
+EED E R E RG + V+ V +L K+Y + D K A+N++S +
Sbjct: 960 MEEDQACAMESRRFEETRGMEEEPTHLPLVVCVDKLTKVYKD--DKKLALNKLSLNLYEN 1017
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
+ LG NGAGKTTT +LTG PTSG+A + H IR MD +R
Sbjct: 1018 QVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIR 1063
>sp|P41234|ABCA2_MOUSE ATP-binding cassette sub-family A member 2 OS=Mus musculus GN=Abca2
PE=1 SV=4
Length = 2434
Score = 192 bits (489), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/285 (39%), Positives = 164/285 (57%), Gaps = 12/285 (4%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
Y +D+L Y +T V I F AY SP N P +++L L YG ++ P+MYP SF F V
Sbjct: 1841 YVWDMLNYLVPATCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEV 1900
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQDDT-LEYVNQYLKVIFLIFPHFCLGEGLMK 120
PS+A+V L NLF+G+ T+ +L + D L+ VN YLK FLIFP++ LG GLM+
Sbjct: 1901 PSSAYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLME 1960
Query: 121 LANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFT 180
+A + + + G + + W ++ + L M G + + + +Y F
Sbjct: 1961 MAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMTVEGFVGFFLTIMCQYN-----FL 2015
Query: 181 RSNPHPVPVS---LEED-DVRKERERVERGADSGDVLVVKRLFKIYANSKDTKP-AVNQI 235
R P +PVS +E+D DV ER+RV RG D++ ++ L K+Y + K + AV+++
Sbjct: 2016 R-QPQRLPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRL 2074
Query: 236 SFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
GV GECFGLLG+NGAGKT+TFKMLTG T G A+V HS+
Sbjct: 2075 CLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSV 2119
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 66/144 (45%), Gaps = 16/144 (11%)
Query: 145 AWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNPHPVPVSLEEDDVRKERERVE 204
W + G+ A HG + A L ++ C ++E + R E
Sbjct: 936 GWAVGGQKPGSGAGHGHTHRASAL---WRRIQAC-----------AMESRHFEETRGMEE 981
Query: 205 RGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTG 264
V+ V +L K+Y N D K A+N++S + + LG NGAGKTTT +LTG
Sbjct: 982 EPTHLPLVVCVDKLTKVYKN--DKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTG 1039
Query: 265 AIKPTSGNAYVMNHSIRDSMDLVR 288
PTSG+A + H IR MD +R
Sbjct: 1040 LFPPTSGSATIYGHDIRTEMDEIR 1063
>sp|Q9ESR9|ABCA2_RAT ATP-binding cassette sub-family A member 2 OS=Rattus norvegicus
GN=Abca2 PE=1 SV=1
Length = 2434
Score = 192 bits (488), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 112/285 (39%), Positives = 164/285 (57%), Gaps = 12/285 (4%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
Y +D+L Y +T + I F AY SP N P +++L L YG ++ P+MYP SF F V
Sbjct: 1841 YVWDMLNYLVPATCCIIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEV 1900
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQ-DDTLEYVNQYLKVIFLIFPHFCLGEGLMK 120
PS+A+V L NLF+G+ T+ +L + D L+ VN YLK FLIFP++ LG GLM+
Sbjct: 1901 PSSAYVFLIVINLFIGITATVATFLLQLFEHDKDLKVVNSYLKSCFLIFPNYNLGHGLME 1960
Query: 121 LANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFT 180
+A + + + G + + W ++ + L M G + + + +Y F
Sbjct: 1961 IAYNEYINEYYAKIGQFDKMKSPFEWDIVTRGLVAMTVEGFVGFFLTIMCQYN-----FL 2015
Query: 181 RSNPHPVPVS---LEED-DVRKERERVERGADSGDVLVVKRLFKIYANSKDTKP-AVNQI 235
R P +PVS +E+D DV ER+RV RG D++ ++ L K+Y + K + AV+++
Sbjct: 2016 R-QPQRLPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKIGRILAVDRL 2074
Query: 236 SFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
GV GECFGLLG+NGAGKT+TFKMLTG T G A+V HS+
Sbjct: 2075 CLGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSV 2119
Score = 68.2 bits (165), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/77 (45%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 212 VLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSG 271
V+ V +L K+Y N D K A+N++S + + LG NGAGKTTT +LTG PTSG
Sbjct: 989 VVCVDKLTKVYKN--DKKLALNKLSLNLYENQVVSFLGHNGAGKTTTMSILTGLFPPTSG 1046
Query: 272 NAYVMNHSIRDSMDLVR 288
+A + H IR MD +R
Sbjct: 1047 SATIYGHDIRTEMDEIR 1063
>sp|Q86UK0|ABCAC_HUMAN ATP-binding cassette sub-family A member 12 OS=Homo sapiens GN=ABCA12
PE=1 SV=3
Length = 2595
Score = 156 bits (394), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 103/285 (36%), Positives = 148/285 (51%), Gaps = 10/285 (3%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
YD++ Y + I FK A+ S NL + LLL +G A MY + +F
Sbjct: 2037 YDMVFYLVPVAFSIGIIAIFKLPAFYSENNLGAVSLLLLLFGYATFSWMYLLAGLFHETG 2096
Query: 64 TAFVVLGCFNLFVGLITTLTVTVL-----DNLQDDTLEYVNQYLKVIFLIFPHFCLGEGL 118
AF+ C NLF G+ + ++++V+ + D TLE +++ LK IFLIFP FC G GL
Sbjct: 2097 MAFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQFCFGYGL 2156
Query: 119 MKLANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRC 178
++L+ F +YG + +G + G ++ ++ L I + +
Sbjct: 2157 IELSQQQSVLDFLKAYGVE-YPNETFEMNKLGAMFVALVSQGTMFFSLRLLINESLIKKL 2215
Query: 179 ---FTRSNPHPVPVSLEED-DVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQ 234
F + N V +++ED DVR ER RVE GA D++ + L K Y AVN
Sbjct: 2216 RLFFRKFNSSHVRETIDEDEDVRAERLRVESGAAEFDLVQLYCLTKTYQLIHKKIIAVNN 2275
Query: 235 ISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS 279
IS G+ GECFGLLG+NGAGKTT FKMLTG I P+SGN + N +
Sbjct: 2276 ISIGIPAGECFGLLGVNGAGKTTIFKMLTGDIIPSSGNILIRNKT 2320
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/107 (29%), Positives = 50/107 (46%), Gaps = 10/107 (9%)
Query: 182 SNPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGR 241
+NP P + ++ E + + G + + + KIY +K AV+ ++
Sbjct: 1321 TNPSASPEYMFSSNIEPEPKDLTVG------VALHGVTKIYG----SKVAVDNLNLNFYE 1370
Query: 242 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
G LLG NGAGKTTT MLTG ++G +V I+ + VR
Sbjct: 1371 GHITSLLGPNGAGKTTTISMLTGLFGASAGTIFVYGKDIKTDLHTVR 1417
>sp|Q99758|ABCA3_HUMAN ATP-binding cassette sub-family A member 3 OS=Homo sapiens GN=ABCA3
PE=1 SV=2
Length = 1704
Score = 142 bits (358), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 108/313 (34%), Positives = 156/313 (49%), Gaps = 33/313 (10%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
+DL+ + S L++ +F AF A+ ++ + LLL YG A+IPLMY +F F +
Sbjct: 1148 WDLISFLIPSLLLLVVFKAFDVRAFTRDGHMADTLLLLLLYGWAIIPLMYLMNFFFLGAA 1207
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKLAN 123
TA+ L FN+ G+ T L VT++ + LE +++ L +FL+ P+ CLG +
Sbjct: 1208 TAYTRLTIFNILSGIATFLMVTIM-RIPAVKLEELSKTLDHVFLVLPNHCLGMAVSSFYE 1266
Query: 124 TYWTSSFANS----------YGTRLVAVNIWAWRM--IGKNLTCMACHGALYSAINLSIE 171
Y T + S Y + N +AW +G+ + MA G Y + IE
Sbjct: 1267 NYETRRYCTSSEVAAHYCKKYNIQYQE-NFYAWSAPGVGRFVASMAASGCAYLILLFLIE 1325
Query: 172 YKVFSR-----CFTRSNPH------PVPVSLEEDDVRKERERVERGADSGDVL-----VV 215
+ R C R +PV E+ DV ER R+ A S D L ++
Sbjct: 1326 TNLLQRLRGILCALRRRRTLTELYTRMPVLPEDQDVADERTRIL--APSPDSLLHTPLII 1383
Query: 216 KRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYV 275
K L K+Y + AV+++S V +GECFGLLG NGAGKTTTFKMLTG TSG+A+V
Sbjct: 1384 KELSKVY-EQRVPLLAVDRLSLAVQKGECFGLLGFNGAGKTTTFKMLTGEESLTSGDAFV 1442
Query: 276 MNHSIRDSMDLVR 288
H I + VR
Sbjct: 1443 GGHRISSDVGKVR 1455
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 183 NPHPVPVSLEEDDVRKERERVERGADSGDVLV----VKRLFKIYANSKDTKPAVNQISFG 238
P V EED ++ R E + LV +K L K++ + AV ++
Sbjct: 496 KPRAVAGKEEEDSDPEKALRNEYFEAEPEDLVAGIKIKHLSKVFRVGNKDRAAVRDLNLN 555
Query: 239 VGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
+ G+ LLG NGAGKTTT MLTG PTSG AY+ + I M +R
Sbjct: 556 LYEGQITVLLGHNGAGKTTTLSMLTGLFPPTSGRAYISGYEISQDMVQIR 605
>sp|Q86UQ4|ABCAD_HUMAN ATP-binding cassette sub-family A member 13 OS=Homo sapiens GN=ABCA13
PE=2 SV=3
Length = 5058
Score = 139 bits (350), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 99/288 (34%), Positives = 148/288 (51%), Gaps = 8/288 (2%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
YD+L Y S L V + +AF+ A+ +NL LL +G A +P MY S IFS
Sbjct: 4506 YDMLFYLVSVCLCVAVIVAFQLTAFTFRKNLAATALLLSLFGYATLPWMYLMSRIFSSSD 4565
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNL-----QDDTLEYVNQYLKVIFLIFPHFCLGEGL 118
AF+ N GL T L +T++ L + L+ + LK +F IFP FCLG+GL
Sbjct: 4566 VAFISYVSLNFIFGLCTML-ITIMPRLLAIISKAKNLQNIYDVLKWVFTIFPQFCLGQGL 4624
Query: 119 MKLANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRC 178
++L +++G V+ + +G +A G + + + + + +
Sbjct: 4625 VELCYNQIKYDLTHNFGID-SYVSPFEMNFLGWIFVQLASQGTVLLLLRVLLHWDLLRWP 4683
Query: 179 FTRSNPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFG 238
S S ++ DV KE +RV G +GD+LV+ L K Y AV IS G
Sbjct: 4684 RGHSTLQGTVKSSKDTDVEKEEKRVFEGRTNGDILVLYNLSKHYRRFFQNIIAVQDISLG 4743
Query: 239 VGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDL 286
+ +GECFGLLG+NGAGK+TTFKML G + TSG+A ++ + D++DL
Sbjct: 4744 IPKGECFGLLGVNGAGKSTTFKMLNGEVSLTSGHA-IIRTPMGDAVDL 4790
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Query: 198 KERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTT 257
+ RE G+ G LV + + K V +S R + LLG NGAGKTT
Sbjct: 3829 QNREGELEGSAPGVTLV-----SVTKEYEGHKAVVQDLSLTFYRDQITALLGTNGAGKTT 3883
Query: 258 TFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
MLTG PTSG + +++ + VR
Sbjct: 3884 IISMLTGLHPPTSGTIIINGKNLQTDLSRVR 3914
>sp|Q8R420|ABCA3_MOUSE ATP-binding cassette sub-family A member 3 OS=Mus musculus GN=Abca3
PE=2 SV=3
Length = 1704
Score = 137 bits (345), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 162/312 (51%), Gaps = 31/312 (9%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
+DL+ + S L++ +F AF A+ ++ L+ LL+ YG A+IPLMY SF FS S
Sbjct: 1148 WDLISFLVPSLLLLVVFQAFNVHAFTRDGHMADLLLLLMLYGWAIIPLMYLMSFFFSAAS 1207
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKLAN 123
TA+ L FN+ G+ T + VT++ + LE +++ L +FL+ P+ CLG +
Sbjct: 1208 TAYTRLTIFNILSGIATFIMVTIM-RIPAVKLEELSRTLDHVFLVLPNHCLGMAVSNFYE 1266
Query: 124 TYWTSSFANSYGTRLVA-----------VNIWAWRM--IGKNLTCMACHGALYSAINLSI 170
Y T + S + L A + +AW +GK +T MA G +Y + I
Sbjct: 1267 NYETRRYCTS--SELAAHYCKKYNIQYQESFYAWSTPGVGKFVTSMAASGGIYLTLLFLI 1324
Query: 171 EYKV----------FSRCFTRSNPHPVPVSLEED-DVRKERERV-ERGADS--GDVLVVK 216
E + F R +T + L ED DV +ER R+ DS L++
Sbjct: 1325 ETNLLWRLRTFICAFRRRWTLAELQNRTSVLPEDQDVAEERSRILVPSLDSMLDTPLIIN 1384
Query: 217 RLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVM 276
L K+Y + + AV++IS V +GECFGLLG NGAGKTTTFKMLTG TSG+A+V
Sbjct: 1385 ELSKVY-DQRAPLLAVDRISLAVQKGECFGLLGFNGAGKTTTFKMLTGEETITSGDAFVG 1443
Query: 277 NHSIRDSMDLVR 288
+SI + VR
Sbjct: 1444 GYSISSDIGKVR 1455
Score = 58.9 bits (141), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 53/110 (48%), Gaps = 4/110 (3%)
Query: 183 NPHPVPVSLEEDDVRKERERVERGADSGDVLV----VKRLFKIYANSKDTKPAVNQISFG 238
NP V EE ++ R E + LV +K L K++ K + ++
Sbjct: 496 NPRTVVGKEEEGSDPEKALRNEYFEAEPEDLVAGIKIKHLSKVFQVGNKDKMGIRDLTLN 555
Query: 239 VGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
+ G+ LLG NGAGKTTT +LTG PTSG+AY+ + I M +R
Sbjct: 556 LYEGQITVLLGHNGAGKTTTMSLLTGLFPPTSGHAYIHGYEISQDMAQIR 605
>sp|Q84M24|AB1A_ARATH ABC transporter A family member 1 OS=Arabidopsis thaliana GN=ABCA1
PE=2 SV=2
Length = 1882
Score = 128 bits (322), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 95/316 (30%), Positives = 140/316 (44%), Gaps = 38/316 (12%)
Query: 2 YSYDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSV 61
Y +D + + F ST + +F AF E +I V +LL YG A+ Y +F F+
Sbjct: 1224 YVWDFISFLFPSTFAIILFYAFGLEQFIGIGRFLPTVLMLLEYGLAIASSTYCLTFFFTE 1283
Query: 62 PSTAFVVLGCFNLFVGLITTLTVTVLDNLQDDTLEYVNQYLKVIFLIFPHFCLGEGLMKL 121
S A V+ + F GLI + V+ + N YLK F + P FC +GL L
Sbjct: 1284 HSMAQNVILMVHFFSGLILMVISFVMGLIP--ATASANSYLKNFFRLSPGFCFSDGLASL 1341
Query: 122 ANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEY--------- 172
A +S+G ++ W + G ++ + Y + L +E
Sbjct: 1342 ALLRQGMKDKSSHG-------VFEWNVTGASICYLGLESIFYFLVTLGLELMPVQKVMSF 1394
Query: 173 ---------KVFSRCFTRSNPHP--------VPVSLEED-DVRKERERVERGADSGDVLV 214
K F + S+ P + +E+D DV++ER+RV G +L
Sbjct: 1395 SIGEWWQNLKAFKQGAGSSSTEPLLKDSTGAISTDMEDDIDVQEERDRVISGLSDNTMLY 1454
Query: 215 VKRLFKIYANSKDTKP--AVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
++ L K+Y K P AV ++F V GECFG LG NGAGKTTT ML+G PTSG
Sbjct: 1455 LQNLRKVYPGDKHHGPKVAVQSLTFSVQAGECFGFLGTNGAGKTTTLSMLSGEETPTSGT 1514
Query: 273 AYVMNHSIRDSMDLVR 288
A++ I S +R
Sbjct: 1515 AFIFGKDIVASPKAIR 1530
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/79 (40%), Positives = 48/79 (60%)
Query: 210 GDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPT 269
G + V+ L K+YA+ + AVN + + + LLG NGAGK+TT ML G + PT
Sbjct: 546 GRCIQVRNLHKVYASRRGNCCAVNSLQLTLYENQILSLLGHNGAGKSTTISMLVGLLPPT 605
Query: 270 SGNAYVMNHSIRDSMDLVR 288
SG+A ++ +SI +MD +R
Sbjct: 606 SGDALILGNSIITNMDEIR 624
>sp|Q5SSE9|ABCAD_MOUSE ATP-binding cassette sub-family A member 13 OS=Mus musculus GN=Abca13
PE=2 SV=1
Length = 5034
Score = 122 bits (305), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 94/273 (34%), Positives = 133/273 (48%), Gaps = 6/273 (2%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
YD+L Y S L V + AF+ A+ +NL LL +G A+IP MY S IFS
Sbjct: 4480 YDMLFYLVSVCLCVAVIGAFQLTAFTFRENLAATALLLALFGYAMIPWMYLMSRIFSSSD 4539
Query: 64 TAFVVLGCFNLFVGLITTLTVTVLDNL----QDDTLEYVNQYLKVIFLIFPHFCLGEGLM 119
AF+ N GL T L T+ L + L+ + LK F IFP FCLG+GL+
Sbjct: 4540 VAFISYISLNFIFGLCTMLMTTMPRLLAIISKAQNLQKIYNVLKWAFTIFPQFCLGQGLI 4599
Query: 120 KLANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCF 179
+L +++G V+ + +G + G + L + +
Sbjct: 4600 ELCYNQIKYDLTHNFGID-SYVSPFEMNFLGWIFVELTLQGTFLLLLRLMLHGDLLRWPR 4658
Query: 180 TRSNPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKP-AVNQISFG 238
S + ++ DV E+ RV G GD++V+ L K Y + K AV+ IS G
Sbjct: 4659 DHSVLQDIVKPAKDIDVETEQMRVLEGRTGGDMMVLCNLSKSYRSVFGGKTTAVHGISLG 4718
Query: 239 VGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSG 271
+ RGECFGLLG+NGAGK+TTFK+L G P+SG
Sbjct: 4719 IPRGECFGLLGVNGAGKSTTFKILNGETPPSSG 4751
Score = 49.3 bits (116), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 36/71 (50%)
Query: 218 LFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMN 277
L + +D K AV +++ R + LLG NGAGKTT ML G PTSG +
Sbjct: 3812 LISVTKEYEDHKVAVQELTLTFHRDQITALLGTNGAGKTTIISMLMGLFPPTSGTITING 3871
Query: 278 HSIRDSMDLVR 288
+++ + VR
Sbjct: 3872 KNLQTDLSKVR 3882
>sp|P34358|CED7_CAEEL ABC transporter ced-7 OS=Caenorhabditis elegans GN=ced-7 PE=1 SV=6
Length = 1704
Score = 104 bits (260), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 85/298 (28%), Positives = 140/298 (46%), Gaps = 39/298 (13%)
Query: 4 YDLLCYTFSSTLVVFIFLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPS 63
YD + Y+ + +F+FLAF + +L ++ Y + +P +Y SF+F PS
Sbjct: 1174 YDGILYSLICLIFLFMFLAF----HWMYDHLAIVILFWFLYFFSSVPFIYAVSFLFQSPS 1229
Query: 64 TAFVVLGCFNLFV---GLITTLTVTVLDNLQDDTLEYVNQYLKVIFL-IFPHFCLGEGLM 119
A V+L + + + L+ + ++ N+ E++ L IF+ + P + G ++
Sbjct: 1230 KANVLLIIWQVVISGAALLAVFLIFMIFNID----EWLKSILVNIFMFLLPSYAFGSAII 1285
Query: 120 KLANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCF 179
+ N+YG L + + W GKN M G A+ + +++K R
Sbjct: 1286 TI----------NTYGMILPSEELMNWDHCGKNAWLMGTFGVCSFALFVLLQFKFVRRFL 1335
Query: 180 TR---------SNPHPVPVSLEE-DDVRKERERVERGADSGDVLVVKRLFKIYANSKDTK 229
++ +N P+ L + V +ERERV R LV+K L K +
Sbjct: 1336 SQVWTVRRSSHNNVQPMMGDLPVCESVSEERERVHRVNSQNSALVIKDLTKTFGRFT--- 1392
Query: 230 PAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
AVN++ V + ECFGLLG+NGAGKTTTF +LTG +SG A + RD +L+
Sbjct: 1393 -AVNELCLAVDQKECFGLLGVNGAGKTTTFNILTGQSFASSGEAMIGG---RDVTELI 1446
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 6/88 (6%)
Query: 184 PHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGE 243
P+ SL E + R AD ++V+ L KI++ + + AV+ +S RG+
Sbjct: 521 PNADSDSLLEGSTEADGARDTARAD----IIVRNLVKIWSTTGER--AVDGLSLRAVRGQ 574
Query: 244 CFGLLGLNGAGKTTTFKMLTGAIKPTSG 271
C LLG NGAGK+TTF + G I+PT+G
Sbjct: 575 CSILLGHNGAGKSTTFSSIAGIIRPTNG 602
>sp|Q8LPK0|AB8A_ARATH ABC transporter A family member 8 OS=Arabidopsis thaliana GN=ABCA8
PE=2 SV=3
Length = 901
Score = 85.5 bits (210), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 98/206 (47%), Gaps = 35/206 (16%)
Query: 108 IFPHFCLGEGLMKLANTYWTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAIN 167
++P F L GL +L+ S+FA Y ++ WR G + + C + +
Sbjct: 466 LYPGFSLYRGLYELSQ----SAFAGDYR----GIDGMKWRDFGNGMKEVTCIMLIEWLLL 517
Query: 168 LSIEYKVFSRCFTRSNP--------------------HPVPVSLEEDDVRKERERVER-- 205
L + Y + ++R +P V V +E+ DV +ERE+VE+
Sbjct: 518 LGLAYYIDQIIYSRKHPLFFLLQSTSKKKQHFSDNKISKVVVEMEKPDVCREREKVEQCL 577
Query: 206 -GADSGDVLVVKRLFKIYANSKDTKP---AVNQISFGVGRGECFGLLGLNGAGKTTTFKM 261
+ ++ L K+Y+ KD P AV +S + +GECFG+LG NGAGKT+ M
Sbjct: 578 LKSTRDSAVLCNNLKKVYS-GKDGNPQKLAVRGLSLALPQGECFGMLGPNGAGKTSFINM 636
Query: 262 LTGAIKPTSGNAYVMNHSIRDSMDLV 287
+TG IKP+SG A+V I MD +
Sbjct: 637 MTGIIKPSSGTAFVQGLDILTDMDRI 662
>sp|Q8T6J2|ABCA5_DICDI ABC transporter A family member 5 OS=Dictyostelium discoideum
GN=abcA5 PE=3 SV=1
Length = 1662
Score = 82.8 bits (203), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 76/264 (28%), Positives = 120/264 (45%), Gaps = 33/264 (12%)
Query: 41 LLCYGCAVIPLMYPCSFIFSVPSTAFVVLGCFNLFVGLITTLTVTVLDN----LQDDTLE 96
L+ + ++IPL Y SF FS + + + +G+I T+ + +L +LE
Sbjct: 1137 LVLFSLSIIPLSYLFSFKFSSFGKSTGAITAIHFSIGVIMTIAMIILRIEVIIKNSSSLE 1196
Query: 97 YVNQYLKVIFLIF-PHFCLGEGLMKLANTYWTSSFANSYGTRLVAVNI---WAWRMIGKN 152
+ + ++F I P + + + S F S RL A+ I W+
Sbjct: 1197 NIADIIDIVFNILSPLYAFSRVI------FIISGFPGSL--RLGALKIDDYWSLHYASTP 1248
Query: 153 LTCMACHGALYSAINLSIEYKVFSRCFTRSNPHPV---PVSLEED-DVRKERERVER--- 205
+ ++ H +++ L I+Y + + R NP + P ++ED DV ER R+E
Sbjct: 1249 IIILSVHVVVWTIFILLIDYSPEFKGYLR-NPKTILPPPPPIDEDSDVSAERIRLESMSP 1307
Query: 206 -------GADSGDVLVVKRLFKIY--ANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKT 256
GD+L K L K++ K AV + G+ +G+ FGLLGLNGAGKT
Sbjct: 1308 IPSTDQGSGGGGDMLQYKGLHKLFIGKGKNPNKNAVYNSTLGIPQGQTFGLLGLNGAGKT 1367
Query: 257 TTFKMLTGAIKPTSGNAYVMNHSI 280
TT ML G I PTSG + H +
Sbjct: 1368 TTVSMLAGDILPTSGQITINGHDL 1391
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 215 VKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAY 274
++ L K + + AVN ++ + G+ GLLG NG+GK+TT MLTG + PTSG A+
Sbjct: 507 IRNLRKEFKTGDGLRIAVNDLNLDMFDGQIHGLLGPNGSGKSTTISMLTGLLSPTSGTAF 566
Query: 275 VMNHSIRDSMDLVR 288
++ + I M+ +R
Sbjct: 567 ILGNDITYQMNEIR 580
>sp|Q54BT5|ABCA3_DICDI ABC transporter A family member 3 OS=Dictyostelium discoideum
GN=abcA3 PE=3 SV=1
Length = 1702
Score = 82.0 bits (201), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 80/302 (26%), Positives = 135/302 (44%), Gaps = 19/302 (6%)
Query: 1 VYSYDLLCYTFSSTLVVFIFLAFKEEAYISP--QNLPGLVALLLCYGCAVIPLMYPCSFI 58
VY L + + T ++ IFLA S P + L+ + A+IPL Y S+
Sbjct: 1074 VYWLSNLIWDYVLTFIMVIFLAVVVVIIDSKFRNQFPLFICALVLFVTAIIPLSYLFSYC 1133
Query: 59 FSVPSTAFVVLGCFNLFVGLITTLTVTVLD----NLQDDTLEYVNQYLKVIFLIFPHFCL 114
+S A + + +GL+ T+T +L +D L+ + + ++F F F
Sbjct: 1134 WSSHGKATGFIFGIHFGIGLLMTVTCFILRIWVIKDDNDILQTITDIIDLVFFFFSPFYC 1193
Query: 115 GEGLMKLANTY-WTSSFANSYGTRLVAVNIWAWRMIGKNLTCMACHGALYSAINLSIEYK 173
+M + + + T+ SY N W + + +A H +++ + ++Y
Sbjct: 1194 FSKVMVIISNFPGTTRLGESY-----IANYWGIKFGLPPVCFLALHTLVWTIWIMVLDYY 1248
Query: 174 VFSRCFTR----SNPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTK 229
R R P P S E+ DV ER +V S D ++++ FK+Y K
Sbjct: 1249 PELRGKYRKGRNEKSSPPPPSDEDSDVSHERSKVLSFETSNDPIIMRDFFKLYKGKGKAK 1308
Query: 230 P--AVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIR-DSMDL 286
AV S + +G+ FGLLGLNGAGK+TT L+G + P+ G +V +I+ +D
Sbjct: 1309 DNLAVYNTSLSIPKGQTFGLLGLNGAGKSTTLGCLSGEVIPSGGEIFVNGFNIQTQRLDA 1368
Query: 287 VR 288
+R
Sbjct: 1369 LR 1370
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 209 SGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP 268
S + +++L K + + AV+ +S + + LG NG+GK+TT MLTG I
Sbjct: 496 SKATIQIRKLRKEFKTGDGKRVAVDDLSIDMYQDRIHCFLGPNGSGKSTTIGMLTGLITC 555
Query: 269 TSGNAYVMNHSIRDSMDLVR 288
T G+A + I ++DL+R
Sbjct: 556 TRGSALINGLDINQNIDLIR 575
>sp|Q9FLT4|AB10A_ARATH ABC transporter A family member 10 OS=Arabidopsis thaliana
GN=ABCA10 PE=1 SV=2
Length = 909
Score = 81.6 bits (200), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 5/112 (4%)
Query: 181 RSNPHPVPVSLEEDDVRKERERVER---GADSGDVLVVKRLFKIYANSKDTKP--AVNQI 235
R N V + +E+ DV +ERE+VE+ +G +V L K+Y S P AV +
Sbjct: 552 RQNSENVLIDMEKTDVTQEREKVEKLRKEGTTGHAIVCDNLKKVYPGSDGNPPKLAVRGL 611
Query: 236 SFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
V GECFG+LG NGAGKT+ M+TG +KPTSG A V I M+ V
Sbjct: 612 YLDVPSGECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICKDMNKV 663
>sp|Q9STT5|AB7A_ARATH ABC transporter A family member 7 OS=Arabidopsis thaliana GN=ABCA7
PE=1 SV=2
Length = 935
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 187 VPVSLEEDDVRKERERVER---GADSGDVLVVKRLFKIYANSKDTKP--AVNQISFGVGR 241
V V +E+ DV E ++VER + + +V L K+Y P AV +S V
Sbjct: 584 VSVDMEKPDVTHESKKVERLMLESSTSHAIVCDNLKKVYPGRDGNPPKLAVRGLSLAVPS 643
Query: 242 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
GECFG+LG NGAGKT+ M+TG +KPTSG A V I + MD V
Sbjct: 644 GECFGMLGPNGAGKTSFINMMTGLLKPTSGTALVQGLDICNDMDRV 689
>sp|Q9STT7|AB5A_ARATH ABC transporter A family member 5 OS=Arabidopsis thaliana GN=ABCA5
PE=3 SV=2
Length = 936
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 187 VPVSLEEDDVRKERERVER---GADSGDVLVVKRLFKIYA--NSKDTKPAVNQISFGVGR 241
+ + +E+ DV ER +VE+ +G +V L K+Y + K AV +S V
Sbjct: 585 IAIEMEKLDVAHERVKVEQLMLETSTGHAIVCDNLKKVYPCRDGNPQKMAVRGLSLAVPS 644
Query: 242 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
GECFG+LG NGAGKT+ M+TG +KPTSG A+V I MD+V
Sbjct: 645 GECFGMLGPNGAGKTSFINMMTGLMKPTSGAAFVHGLDICKDMDIV 690
>sp|Q9STT8|AB4A_ARATH ABC transporter A family member 4 OS=Arabidopsis thaliana GN=ABCA4
PE=3 SV=2
Length = 937
Score = 77.0 bits (188), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/106 (42%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 187 VPVSLEEDDVRKERERVER---GADSGDVLVVKRLFKIYANSKDTKP--AVNQISFGVGR 241
V V +E+ DV +ER +VE+ + + +V +L K+Y P AV +S V
Sbjct: 586 VSVEMEKLDVVEERAKVEQLMLESSTSHAIVCDKLKKVYPGRDGNPPKMAVGGLSIAVPP 645
Query: 242 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
GECFG+LG NGAGKT+ M+TG +KPTSG A V + I MD V
Sbjct: 646 GECFGMLGPNGAGKTSFINMMTGLVKPTSGTALVESLDICQDMDKV 691
>sp|Q1PEH6|AB3A_ARATH ABC transporter A family member 3 OS=Arabidopsis thaliana GN=ABCA3
PE=2 SV=3
Length = 932
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 59/106 (55%), Gaps = 5/106 (4%)
Query: 187 VPVSLEEDDVRKERERVER---GADSGDVLVVKRLFKIYANSKDTKP--AVNQISFGVGR 241
+ V +E+ DV E E+V + + + +V +L K+Y P AV +S V
Sbjct: 581 ISVEMEKLDVIHESEKVAQLMLESSTSHAIVCDKLRKVYPGRDGNPPKKAVRVLSLAVPS 640
Query: 242 GECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
GECFG+LG NGAGKT+ M+TG +KPTSG A+V I MD V
Sbjct: 641 GECFGMLGPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRV 686
>sp|Q9STT6|AB6A_ARATH ABC transporter A family member 6 OS=Arabidopsis thaliana GN=ABCA6
PE=3 SV=2
Length = 926
Score = 74.3 bits (181), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 61/108 (56%), Gaps = 9/108 (8%)
Query: 187 VPVSLEEDDVRKERERV-----ERGADSGDVLVVKRLFKIYANSKDTKP--AVNQISFGV 239
V V +E+ DV +E+E V ER + G +V L K+Y P AV +S V
Sbjct: 581 VSVEMEKLDVIQEKETVKQLIFERSKNHG--IVCDNLKKVYQGRDGNPPKLAVCGLSLAV 638
Query: 240 GRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
GECFG+LG NGAGKT+ M+TG +KP+SG+A+V I MD V
Sbjct: 639 PSGECFGMLGPNGAGKTSFINMMTGLVKPSSGSAFVQGLDICKDMDKV 686
>sp|Q8T6J1|ABCA6_DICDI ABC transporter A family member 6 OS=Dictyostelium discoideum
GN=abcA6 PE=3 SV=1
Length = 1631
Score = 74.3 bits (181), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 83/273 (30%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 22 AFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPSTAFVVLGCFNLFVGLITT 81
AFKE+ + L+ CA+IPL Y S+ F A + GL+ T
Sbjct: 1122 AFKEQF-------GSFLLCLILLSCAIIPLGYLMSYKFQTYGKAVGAITAILFVFGLVFT 1174
Query: 82 LT-----VTVLDNLQDDTLEYVNQYLKVIF-LIFPHFCLGEGLMKLANTYWTSSFANSYG 135
+ + + N Q+ T + V + +IF +I P F L + L S F S
Sbjct: 1175 IASLNVRIQAVVN-QNSTTQKVADIIDLIFSIISPIFALNRIVFIL------SGFPGS-- 1225
Query: 136 TRLVAV---NIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSN---PHPVPV 189
TRL N W++ +G L +A H L++ L ++Y + F ++ P P P
Sbjct: 1226 TRLGTFKVDNYWSFDYLGTPLIVLAGHAVLWNVWILLLDYVPQIKGFFKNPKNLPAPSPP 1285
Query: 190 SLEEDDVRKERERVERGADSGDVLVVKRLFKIYANS--KDTKPAVNQISFGVGRGECFGL 247
E+ DV +ER R+ S + + K L K++ S +K AV + G+ RG+ FGL
Sbjct: 1286 QDEDYDVSQERRRLLNMRPSEEPIQFKNLHKLFPGSGKNPSKTAVYNSTLGIPRGQTFGL 1345
Query: 248 LGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
LGLNG GK+TT ML+G I P+SG + + +
Sbjct: 1346 LGLNGGGKSTTLSMLSGEIVPSSGEISINGYDV 1378
Score = 55.5 bits (132), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 49/102 (48%), Gaps = 12/102 (11%)
Query: 199 ERERVERGADSGDV------------LVVKRLFKIYANSKDTKPAVNQISFGVGRGECFG 246
E + +E DS DV + ++ L K + + AVN + + +
Sbjct: 465 EIDDIESTFDSEDVETIPLKVLKNSTISIRNLRKEFETGDGLRVAVNDLYLDMFEDQIHA 524
Query: 247 LLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
LLG NG GK+TT MLTG I PTSG+A++ + I M +R
Sbjct: 525 LLGPNGCGKSTTIGMLTGLISPTSGSAFIRGYDITSQMSKIR 566
>sp|Q54DT1|ABCA9_DICDI ABC transporter A family member 9 OS=Dictyostelium discoideum
GN=abcA9 PE=3 SV=1
Length = 845
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 58/97 (59%), Gaps = 4/97 (4%)
Query: 191 LEEDDVRKERERV-ERGADSGDV-LVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLL 248
+E++DV +E+E + R D ++ ++++ L K Y KP+V+ + V +GE G L
Sbjct: 507 VEDEDVLEEKEMIINRRYDPNEMTVIIEGLTKHYVGRP--KPSVDNLYLSVRKGEVLGFL 564
Query: 249 GLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMD 285
G NGAGKTTT MLTG PTSG A+V IR MD
Sbjct: 565 GANGAGKTTTISMLTGLYTPTSGTAHVAGLDIRYDMD 601
>sp|Q9FLT8|AB12A_ARATH ABC transporter A family member 12 OS=Arabidopsis thaliana
GN=ABCA12 PE=3 SV=1
Length = 917
Score = 72.0 bits (175), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 5/112 (4%)
Query: 181 RSNPHPVPVSLEEDDVRKERERVER---GADSGDVLVVKRLFKIYANSKDTKP--AVNQI 235
R + V + +++ DV +ERE V++ +G ++ L K+Y P AV +
Sbjct: 560 RLDSKRVFIDMDKHDVTQERESVQKLRNEGSTGHAILCDNLKKVYPGRDGNPPKMAVRGL 619
Query: 236 SFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLV 287
V GECFG+LG NGAGKT+ M+TG +KP+SG A V I M+ V
Sbjct: 620 YLSVSSGECFGMLGPNGAGKTSFISMMTGLLKPSSGTALVQGLDICKDMNKV 671
>sp|Q8WWZ7|ABCA5_HUMAN ATP-binding cassette sub-family A member 5 OS=Homo sapiens GN=ABCA5
PE=2 SV=2
Length = 1642
Score = 71.2 bits (173), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 63/122 (51%), Gaps = 12/122 (9%)
Query: 176 SRCFTRSNPHPVPVSLEEDDVRKERERVE-----RGADSGDVLVVKRLFKIYANSKD--- 227
++ R P P E++DV+ ER +V+ + + ++V L K Y + KD
Sbjct: 1248 TKSKNRKLPEPPDNEDEDEDVKAERLKVKELMGCQCCEEKPSIMVSNLHKEYDDKKDFLL 1307
Query: 228 ----TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS 283
K A ISF V +GE GLLG NGAGK+T +L G I+PTSG ++ ++S S
Sbjct: 1308 SRKVKKVATKYISFCVKKGEILGLLGPNGAGKSTIINILVGDIEPTSGQVFLGDYSSETS 1367
Query: 284 MD 285
D
Sbjct: 1368 ED 1369
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 220 KIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS 279
K Y + A+ +SF + G+ LLG +G GK+T +L G P+ G A + H
Sbjct: 485 KTYRKKGENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHR 544
Query: 280 IRD 282
+ +
Sbjct: 545 VSE 547
>sp|Q8T6J0|ABCA7_DICDI ABC transporter A family member 7 OS=Dictyostelium discoideum
GN=abcA7 PE=3 SV=1
Length = 839
Score = 70.9 bits (172), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
Query: 191 LEEDDVRKERERVERGADSGD--VLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLL 248
L ++DV+KER+ + +G + + L+V+ L K + KPA++ + V +GE G L
Sbjct: 501 LMDEDVKKERDMIVKGEYNPEEMTLIVQGLRKQFPGRP--KPALSNLYLSVKKGEVLGYL 558
Query: 249 GLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
G NGAGKTT+ +LTG PTSG A++ IR MD +
Sbjct: 559 GPNGAGKTTSISILTGLYTPTSGTAHIAGLDIRYDMDKIH 598
>sp|Q555Z5|ABCA4_DICDI ABC transporter A family member 4 OS=Dictyostelium discoideum
GN=abcA4 PE=3 SV=1
Length = 1615
Score = 70.5 bits (171), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 120/258 (46%), Gaps = 35/258 (13%)
Query: 38 VALLLCYGCAVIPLMYPCSFIFSVPSTAFVVLGCFNLFVGLITTLTVTVLD--NLQDDTL 95
++ ++ + ++IPL Y SF FS A + + VGLI T+ +L ++++++
Sbjct: 1107 ISGVVLFTFSIIPLSYLMSFKFSSHGKAVGAIFAIHFGVGLIFTVISFILRVWAIKENSI 1166
Query: 96 EYVNQYLKVI-----FLIFPHFCLGEGLMKLANTYWTSSFANSYGTRLVAVNIWAWRMIG 150
+ Q+L I + I P FC + L + S S+ ++ W++
Sbjct: 1167 SF--QFLTDIIEYCFYAISPFFCFSKILAIVTKFPGVSRVDQSF------IDYWSFHFGL 1218
Query: 151 KNLTCMACHGALYSAINLSIEYK-------VFSRCFTRSNPHPVPVSLEEDDVRKERERV 203
+ H ++ L I+Y S+ F+ S P+P S E+ DV ER V
Sbjct: 1219 LPNAILFLHCIVWITWILLIDYSSEIKGKFTISKLFSNS---PIPDSNEDSDVSNERIIV 1275
Query: 204 ERGAD------SGDV--LVVKRLFKIY--ANSKDTKPAVNQISFGVGRGECFGLLGLNGA 253
++ D SG+V ++ L+K + + +K AV + + G+ FGLLGLNG
Sbjct: 1276 KQLLDNNTNGGSGNVYPIIFNNLYKKFNSVGNYKSKIAVYNSTLAIPTGQTFGLLGLNGC 1335
Query: 254 GKTTTFKMLTGAIKPTSG 271
GK+TT M++G I PT G
Sbjct: 1336 GKSTTLGMISGEISPTGG 1353
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 190 SLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLG 249
S E + K ++ER S ++ L K + + AVN +S + + LG
Sbjct: 474 SYNEKNFEKIEHQLERPTIS-----IRNLRKEFKTGDGNRIAVNDLSIDMYKNRIHSFLG 528
Query: 250 LNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
NG+GK+TT MLTG I+PTSG+A + IR+++D +R
Sbjct: 529 PNGSGKSTTLSMLTGMIEPTSGDALINGFDIRNNIDEIR 567
>sp|Q8K448|ABCA5_MOUSE ATP-binding cassette sub-family A member 5 OS=Mus musculus GN=Abca5
PE=1 SV=2
Length = 1642
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 14/115 (12%)
Query: 184 PHPVPVSLEED-DVRKERERVE-----RGADSGDVLVVKRLFKIYANSKD-------TKP 230
P P P++ +ED DV+ ER +V+ + + ++V L K Y + KD TK
Sbjct: 1256 PEP-PINEDEDEDVKAERLKVKELMGCQCCEEKPAIMVCNLHKEYDDKKDFLHSRKTTKV 1314
Query: 231 AVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMD 285
A ISF V +GE GLLG NGAGK+T L G ++PTSG ++ ++ S D
Sbjct: 1315 ATKYISFCVKKGEILGLLGPNGAGKSTVINTLVGDVEPTSGKIFLGDYGSHSSED 1369
Score = 40.4 bits (93), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 31/63 (49%)
Query: 220 KIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS 279
K Y + A+ +SF + G+ LLG +G GK+T +L G P+ G A + H
Sbjct: 485 KSYRKKTENVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHR 544
Query: 280 IRD 282
+ +
Sbjct: 545 VSE 547
>sp|Q8CF82|ABCA5_RAT ATP-binding cassette sub-family A member 5 OS=Rattus norvegicus
GN=Abca5 PE=2 SV=1
Length = 1642
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 22/137 (16%)
Query: 162 LYSAINLSIEYKVFSRCFTRSNPHPVPVSLEED-DVRKERERVE-----RGADSGDVLVV 215
L+ A++ ++K F P P P++ +ED DV+ ER +V+ + + ++V
Sbjct: 1242 LFRALSQKAKHKKF--------PEP-PINEDEDEDVKAERLKVKELMGCQCCEEKPAIMV 1292
Query: 216 KRLFKIYANSKD-------TKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKP 268
L K Y + KD TK A +SF V +GE GLLG NGAGK+T +L G ++P
Sbjct: 1293 YNLHKEYDDKKDFLHSRKTTKVATKYVSFCVKKGEILGLLGPNGAGKSTIINILVGDVEP 1352
Query: 269 TSGNAYVMNHSIRDSMD 285
TSG ++ ++ + D
Sbjct: 1353 TSGKIFLGDYGSHSNED 1369
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 32/63 (50%)
Query: 220 KIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHS 279
K Y +T A+ +SF + G+ LLG +G GK+T +L G P+ G A + H
Sbjct: 485 KAYRKKNETVEALRNLSFDIYEGQITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHR 544
Query: 280 IRD 282
+ +
Sbjct: 545 VSE 547
>sp|Q8T6J5|ABCA2_DICDI ABC transporter A family member 2 OS=Dictyostelium discoideum
GN=abcA2 PE=3 SV=1
Length = 1621
Score = 67.0 bits (162), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 122/287 (42%), Gaps = 25/287 (8%)
Query: 9 YTFSSTLVVFI--FLAFKEEAYISPQNLPGLVALLLCYGCAVIPLMYPCSFIFSVPSTAF 66
Y FS L++ LA E Y S L L +L C +V+PL Y S+ F+ A
Sbjct: 1086 YFFSFILILLTTCILAGIRENYKSQFGLMFLCLILFC--VSVVPLSYLLSYRFASFGKAT 1143
Query: 67 VVLGCFNLFVGLI-----TTLTVTVLDNLQDDTLEYVNQYLKVIFLIF-PHFCLGEGLMK 120
+ + +G+I L + VL + QD + + ++F I P F L
Sbjct: 1144 GAITAIHFAIGIIFVIISLNLRIQVLID-QDVDFQKAADAVDIVFCILSPLFAYSRIL-- 1200
Query: 121 LANTYWTSSFANSYGTRLVAV-NIWAWRMIGKNLTCMACHGALYSAINLSIEYKVFSRCF 179
+ S F S + V N W+ G + +A H ++ + + ++Y
Sbjct: 1201 ----FLVSEFPGSVRVGTLKVDNYWSMDYGGSPMIILAAHCIVWVSWIMILDYTPELIGK 1256
Query: 180 TRSNPHPVPVSLEEDD----VRKERERVERGADSGDVLVVKRLFKIYANSKDTKP--AVN 233
R NP + DD V ER R+ + + L + L K++ P AV
Sbjct: 1257 IR-NPKNIEAPPPPDDEDSDVTAERTRLLSVGPNDEPLQFRNLHKLFPAVGKAAPKAAVY 1315
Query: 234 QISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
+ + +G+ FGLLGLNGAGKTTT ML G I P+SG + H +
Sbjct: 1316 NSTLSIPKGQTFGLLGLNGAGKTTTIAMLCGDIVPSSGEVTINGHDL 1362
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 177 RCFTRSNPHPVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQIS 236
+C + + + + +DV E G + ++ L K Y + AVN +
Sbjct: 452 KCNENGDEQDIESTYQNEDV----EMTPVGVGQKVTISIRNLRKEYNTGDGLRVAVNDLY 507
Query: 237 FGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
+ + LLG NG+GK+TT M+TG PT+GNA+V + I + M VR
Sbjct: 508 LDMYENQIHALLGPNGSGKSTTIGMMTGLTPPTNGNAFVHGYGILNQMSSVR 559
>sp|P0A9U2|YBHF_SHIFL Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Shigella flexneri GN=ybhF PE=3 SV=1
Length = 578
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 212 VLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSG 271
V+ K L K + + A + ++F V RGE FGLLG NGAGK+TTFKM+ G + PTSG
Sbjct: 329 VIEAKELTKKFGDFA----ATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSG 384
Query: 272 NAYVMNHSIRDSMDLVR 288
A V+ +++S R
Sbjct: 385 QALVLGMDLKESSGKAR 401
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMN 277
KPAV + + G GL+G +GAGKTT +ML G +KP SG+A V+
Sbjct: 20 KPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIG 68
>sp|P0A9U1|YBHF_ECOLI Uncharacterized ABC transporter ATP-binding protein YbhF
OS=Escherichia coli (strain K12) GN=ybhF PE=1 SV=1
Length = 578
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 212 VLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSG 271
V+ K L K + + A + ++F V RGE FGLLG NGAGK+TTFKM+ G + PTSG
Sbjct: 329 VIEAKELTKKFGDFA----ATDHVNFAVKRGEIFGLLGPNGAGKSTTFKMMCGLLVPTSG 384
Query: 272 NAYVMNHSIRDSMDLVR 288
A V+ +++S R
Sbjct: 385 QALVLGMDLKESSGKAR 401
Score = 44.7 bits (104), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMN 277
KPAV + + G GL+G +GAGKTT +ML G +KP SG+A V+
Sbjct: 20 KPAVAPLDCTIHAGYVTGLVGPDGAGKTTLMRMLAGLLKPDSGSATVIG 68
>sp|Q8N139|ABCA6_HUMAN ATP-binding cassette sub-family A member 6 OS=Homo sapiens GN=ABCA6
PE=1 SV=2
Length = 1617
Score = 63.5 bits (153), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/103 (35%), Positives = 53/103 (51%), Gaps = 12/103 (11%)
Query: 182 SNPHPVPVSLEEDDVRKERERVERGA-----DSGDVLVVKRLFKIYANSKDT-------K 229
+ P+P E++D++ ER R D V++ L K YA K + K
Sbjct: 1241 AKPNPEEPIDEDEDIQTERIRTATALTTSILDEKPVIIASCLHKEYAGQKKSCFSKRKKK 1300
Query: 230 PAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
A ISF V GE GLLG NGAGK+++ +M++G KPT+G
Sbjct: 1301 IAARNISFCVQEGEILGLLGPNGAGKSSSIRMISGITKPTAGE 1343
Score = 40.8 bits (94), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 48/114 (42%), Gaps = 3/114 (2%)
Query: 176 SRCFTRSNPHPVPVSLEEDDVRKERERVERGA---DSGDVLVVKRLFKIYANSKDTKPAV 232
S CF + + E D + E A + + ++ + K Y A+
Sbjct: 438 SSCFQHQRTNAKVIEKEIDAEHPSDDYFEPVAPEFQGKEAIRIRNVKKEYKGKSGKVEAL 497
Query: 233 NQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDL 286
+ F + G+ +LG +GAGK++ +L G PT G+ + N ++ + DL
Sbjct: 498 KGLLFDIYEGQITAILGHSGAGKSSLLNILNGLSVPTEGSVTIYNKNLSEMQDL 551
>sp|Q8IUA7|ABCA9_HUMAN ATP-binding cassette sub-family A member 9 OS=Homo sapiens GN=ABCA9
PE=1 SV=1
Length = 1624
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 47/90 (52%), Gaps = 12/90 (13%)
Query: 195 DVRKERER-----VERGADSGDVLVVKRLFKIYANSKDT-------KPAVNQISFGVGRG 242
D++ ER R R D V++ L K YA K K A +SF V +G
Sbjct: 1260 DIQMERMRTVNAMAVRDFDETPVIIASCLRKEYAGKKKNCFSKRKKKIATRNVSFCVKKG 1319
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
E GLLG NGAGK+TT KM+TG KPT+G
Sbjct: 1320 EVIGLLGHNGAGKSTTIKMITGDTKPTAGQ 1349
Score = 51.2 bits (121), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 27/76 (35%), Positives = 42/76 (55%)
Query: 211 DVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS 270
+ + +K L K YA + A+ + F + G+ LLG +GAGKTT +L+G PTS
Sbjct: 479 EAIRIKNLKKEYAGKCERVEALKGVVFDIYEGQITALLGHSGAGKTTLLNILSGLSVPTS 538
Query: 271 GNAYVMNHSIRDSMDL 286
G+ V NH++ D+
Sbjct: 539 GSVTVYNHTLSRMADI 554
>sp|Q54R52|ABCAA_DICDI ABC transporter A family member 10 OS=Dictyostelium discoideum
GN=abcA10 PE=3 SV=1
Length = 887
Score = 61.6 bits (148), Expect = 6e-09, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 46/73 (63%), Gaps = 2/73 (2%)
Query: 218 LFKIYAN--SKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYV 275
L K Y N +K+T AVN +S+ + +G LLG NG+GKT+T ML G P+SG+A++
Sbjct: 486 LKKTYKNPITKETVNAVNDVSYTIKKGTILALLGQNGSGKTSTIGMLNGMRSPSSGDAFI 545
Query: 276 MNHSIRDSMDLVR 288
SI+ MD +R
Sbjct: 546 NGLSIKYDMDKIR 558
>sp|Q8T5Z7|ABCA1_DICDI ABC transporter A family member 1 OS=Dictyostelium discoideum
GN=abcA1 PE=2 SV=1
Length = 877
Score = 61.6 bits (148), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 186 PVPVSLEEDDVRKERERVERGADSGDVLVVKRLFKIYAN---SKDTKPAVNQISFGVGRG 242
P P +++DVR + ++ L++ L K Y K T AV +S V +G
Sbjct: 527 PTPY-FDDEDVRAAITKAHDASNRAP-LIICGLSKSYTKLFRPKKTVHAVKYLSLSVEKG 584
Query: 243 ECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDSMDLVR 288
G LG NG GK+TT MLTG ++PT+G+A V HS+ ++ VR
Sbjct: 585 TILGFLGSNGCGKSTTIGMLTGLLEPTAGDALVYGHSVISNIAAVR 630
>sp|P26050|NODI_BRAJA Nod factor export ATP-binding protein I OS=Bradyrhizobium japonicum
(strain USDA 110) GN=nodI PE=3 SV=2
Length = 306
Score = 61.2 bits (147), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
K VN +SF V RGECFGLLG NGAGK+T +ML G I P G V++ +
Sbjct: 20 KVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMISPDRGKITVLDEPV 71
>sp|Q8K441|ABCA6_MOUSE ATP-binding cassette sub-family A member 6 OS=Mus musculus GN=Abca6
PE=2 SV=2
Length = 1624
Score = 60.8 bits (146), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 12/104 (11%)
Query: 181 RSNPHPVPVSLEEDDVRKERERVERGA-----DSGDVLVVKRLFKIYANSKD-------T 228
++ P+P E+++V+ ER R D V++ L K YA K
Sbjct: 1240 KAQPNPEEPIDEDENVQAERLRTSDALSTPNLDEKPVIIASCLHKEYAGQKKHCCSRRTR 1299
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
AV +SF V +GE GLLG +GAGK+++ +M+ G KPT+G
Sbjct: 1300 NMAVRNVSFCVNKGEILGLLGPDGAGKSSSIRMIAGITKPTAGQ 1343
Score = 40.0 bits (92), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/86 (24%), Positives = 41/86 (47%)
Query: 201 ERVERGADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFK 260
E V+ + + ++ + K Y A+ + + + +LG +GAGK++
Sbjct: 466 EPVDPEYQGKEAIRIRNIKKEYKGKSGKVKALKGLFLDIYESQITAILGHSGAGKSSLLN 525
Query: 261 MLTGAIKPTSGNAYVMNHSIRDSMDL 286
+L+G PT+G+ V N ++ D DL
Sbjct: 526 ILSGLYVPTAGSVTVYNKNLSDMQDL 551
>sp|Q8K442|ABC8A_MOUSE ATP-binding cassette sub-family A member 8-A OS=Mus musculus
GN=Abca8a PE=2 SV=2
Length = 1620
Score = 60.5 bits (145), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 192 EEDDVRKERERVERGADSGD-----VLVVKRLFKIYANSKD-------TKPAVNQISFGV 239
E++DV +ER S D ++ L K Y K K A ISF V
Sbjct: 1253 EDEDVSQERVWTANALTSADFQEKPAIIASCLRKEYKGKKKCFVLKSKKKIATRNISFCV 1312
Query: 240 GRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSIRDS 283
+GE GLLG NGAGK+T+ KM+TG KP++G + S D+
Sbjct: 1313 RKGEVVGLLGHNGAGKSTSIKMITGETKPSAGQVLLKGSSTGDT 1356
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 39/76 (51%)
Query: 211 DVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTS 270
+ + ++ L K Y A+ ++ V +G+ +LG +GAGK+T +L+G PT
Sbjct: 476 EAIRIRNLTKDYIQKSKRTEALKDLTLDVYKGQITAILGHSGAGKSTLLNVLSGLCVPTK 535
Query: 271 GNAYVMNHSIRDSMDL 286
G + N+ + + DL
Sbjct: 536 GWVTIHNNKLSEMTDL 551
>sp|Q55BC0|ABCA8_DICDI ABC transporter A family member 8 OS=Dictyostelium discoideum
GN=abcA8 PE=3 SV=1
Length = 837
Score = 60.1 bits (144), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 21/203 (10%)
Query: 101 YLKVIFLIFPHFCLGEGLMKLAN---TYWTSSF----------ANSYGTRLVAVNIWAWR 147
+++VI I P F + L + + +Y TS F + YG +
Sbjct: 396 FVRVILFILPMFHFSKVLTDINDKVQSYPTSQFKISDLNDNLDGSQYGMD------YLVP 449
Query: 148 MIGKNLTCMACHGALYSAINLSIEYKVFSRCFTRSNPHPVPVSLEEDDVRKERERVERGA 207
G++L M +Y +++ IEY + ++ H ++ DV R +
Sbjct: 450 TTGQSLAYMFILVIVYLSLSAIIEYALSGGFSFKTVKHINVPHFDDQDVANATNRSLDPS 509
Query: 208 DSGDVLV--VKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGA 265
+ ++ + + F + + A+ +S + G GLLG NGAGK+TT +LTG
Sbjct: 510 NKSPFIIRGLSKTFNKFLRPSKSVHALKYLSLDIQEGTVLGLLGSNGAGKSTTIGILTGI 569
Query: 266 IKPTSGNAYVMNHSIRDSMDLVR 288
PTSG+A + HS+ + VR
Sbjct: 570 HSPTSGDAIIYGHSVVKDIHSVR 592
>sp|Q9Z3I3|NODI_BRASS Nod factor export ATP-binding protein I OS=Bradyrhizobium sp.
(strain SNU001) GN=nodI PE=3 SV=1
Length = 305
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/52 (53%), Positives = 34/52 (65%)
Query: 229 KPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGNAYVMNHSI 280
K VN +SF V RGECFGLLG NGAGK+T +ML G I P G V++ +
Sbjct: 20 KVIVNDLSFSVARGECFGLLGPNGAGKSTIARMLLGMIWPDRGKITVLDEPV 71
>sp|Q8XXY9|NODI_RALSO Nod factor export ATP-binding protein I OS=Ralstonia solanacearum
(strain GMI1000) GN=nodI PE=3 SV=1
Length = 321
Score = 59.3 bits (142), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 42/75 (56%), Gaps = 4/75 (5%)
Query: 206 GADSGDVLVVKRLFKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGA 265
G S +L V+ L K Y V+ +SF V RG+CFGLLG NGAGKTTT +ML G
Sbjct: 10 GIGSTPILSVEGLRKRYGEQT----VVDGLSFSVRRGQCFGLLGPNGAGKTTTLRMLLGM 65
Query: 266 IKPTSGNAYVMNHSI 280
P +G + +I
Sbjct: 66 TMPDAGTLQLCGETI 80
>sp|Q3JSQ0|NODI_BURP1 Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain 1710b) GN=nodI PE=3 SV=2
Length = 304
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 219 FKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
F+ D K V+ +SF V GECFGLLG NGAGKTTT KML G P +G+
Sbjct: 8 FQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGS 61
>sp|Q62K72|NODI_BURMA Nod factor export ATP-binding protein I OS=Burkholderia mallei
(strain ATCC 23344) GN=nodI PE=3 SV=2
Length = 304
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 219 FKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
F+ D K V+ +SF V GECFGLLG NGAGKTTT KML G P +G+
Sbjct: 8 FQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGS 61
>sp|Q63TX3|NODI_BURPS Nod factor export ATP-binding protein I OS=Burkholderia
pseudomallei (strain K96243) GN=nodI PE=3 SV=2
Length = 304
Score = 58.5 bits (140), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/54 (53%), Positives = 34/54 (62%)
Query: 219 FKIYANSKDTKPAVNQISFGVGRGECFGLLGLNGAGKTTTFKMLTGAIKPTSGN 272
F+ D K V+ +SF V GECFGLLG NGAGKTTT KML G P +G+
Sbjct: 8 FQQVEKRYDDKLVVDGLSFHVQPGECFGLLGPNGAGKTTTLKMLLGITHPDAGS 61
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.326 0.140 0.433
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 105,506,277
Number of Sequences: 539616
Number of extensions: 4374270
Number of successful extensions: 19970
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 2398
Number of HSP's successfully gapped in prelim test: 113
Number of HSP's that attempted gapping in prelim test: 16971
Number of HSP's gapped (non-prelim): 3046
length of query: 288
length of database: 191,569,459
effective HSP length: 116
effective length of query: 172
effective length of database: 128,974,003
effective search space: 22183528516
effective search space used: 22183528516
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 61 (28.1 bits)