Query psy7223
Match_columns 166
No_of_seqs 136 out of 835
Neff 5.5
Searched_HMMs 29240
Date Fri Aug 16 21:16:11 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7223.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7223hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nxc_A Mannosyl-oligosaccharid 100.0 1.5E-57 5E-62 410.4 11.9 155 1-156 296-475 (478)
2 1hcu_A Alpha-1,2-mannosidase; 100.0 3.2E-56 1.1E-60 403.7 9.7 145 1-149 305-495 (503)
3 1x9d_A Endoplasmic reticulum m 100.0 7.8E-56 2.7E-60 403.6 11.2 145 1-149 361-537 (538)
4 2ri9_A Mannosyl-oligosaccharid 100.0 5.1E-56 1.7E-60 400.1 9.8 144 1-148 292-475 (475)
5 1dl2_A Class I alpha-1,2-manno 100.0 2.2E-55 7.7E-60 398.8 9.3 150 1-152 302-500 (511)
6 1dl2_A Class I alpha-1,2-manno 94.7 0.022 7.5E-07 51.6 4.0 60 25-84 123-208 (511)
7 1x9d_A Endoplasmic reticulum m 93.2 0.036 1.2E-06 50.6 2.4 72 7-84 174-270 (538)
8 1nxc_A Mannosyl-oligosaccharid 91.0 0.19 6.6E-06 45.1 4.3 65 7-77 110-196 (478)
9 1hcu_A Alpha-1,2-mannosidase; 82.6 1.2 4.2E-05 40.1 4.5 57 26-83 131-210 (503)
10 2ri9_A Mannosyl-oligosaccharid 68.1 4.7 0.00016 36.0 4.2 57 26-83 118-196 (475)
11 2gz6_A N-acetyl-D-glucosamine 25.1 2.3E+02 0.0077 23.0 7.3 26 25-50 190-215 (388)
12 3k7x_A LIN0763 protein; Q92DQ0 23.9 52 0.0018 27.5 3.1 64 25-89 110-190 (349)
13 3gt5_A N-acetylglucosamine 2-e 20.7 3.6E+02 0.012 22.3 7.8 52 26-77 192-271 (402)
No 1
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=100.00 E-value=1.5e-57 Score=410.40 Aligned_cols=155 Identities=45% Similarity=0.871 Sum_probs=137.1
Q ss_pred CCccccchhhHHhhhccCCCCchhhhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecC--------Cccccccccc--
Q psy7223 1 MDHLGCFSGGMFGLAAHTRPNSELFNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSS--------PLRLVFLRAA-- 67 (166)
Q Consensus 1 m~hL~CF~pG~laLg~~~~~~~~~~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~--------~~~~y~LRPE-- 67 (166)
|+||+||+|||++||++...+. ..++++++|++||++|+++|.++|+||+ |.|+.+ .+++|+||||
T Consensus 296 ~~hL~cF~gG~~aLg~~~~~~~-~~~~~l~~a~~l~~tC~~~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~i 374 (478)
T 1nxc_A 296 MGHLTCFAGGMFALGADGAPEA-RAQHYLELGAEIARTCHESYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVI 374 (478)
T ss_dssp EETGGGGHHHHHHHTSTTSCTT-CHHHHHHHHHHHHHHHHHHHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHH
T ss_pred ccchhhhhHHHHHhcccccccc-chHHHHHHHHHHHHHHHHHHHhcccCCCCeEEEeccCcccccccccccccCCChHHH
Confidence 7999999999999999876542 3689999999999999999999999999 677543 2678999999
Q ss_pred -------CCCCChhhHH-----HHHHHHHccccccceeecccccCCCCCCCCchhHHHHHHHHHHHhhcCCCCCCCCCCe
Q psy7223 68 -------SLPCQQNFRR-----NTALEKHCRTEYGYTGIKNVYQENPQQDDVQQSFFLAETLKYLYLLFSDDSLLPLDQW 135 (166)
Q Consensus 68 -------R~TgD~~yrd-----f~ai~~~~r~~~G~a~l~dV~~~~~~~~D~meSF~laETlKYlYLlFs~~~~~~ld~~ 135 (166)
|+||||+||| |++|+++|||+|||++|+||++.++.++|+|||||||||||||||||||++.++||+|
T Consensus 375 ES~fylyR~TgD~~yre~gw~~f~ai~k~~r~~~G~a~i~dV~~~~~~~~D~meSF~laETLKYlYLLFsd~~~i~ld~~ 454 (478)
T 1nxc_A 375 ETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLRDVYIARESYDDVQQSFFLAETLKYLYLIFSDDDLLPLEHW 454 (478)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHTEETTEECCBSCTTSSSCCBCCCBCHHHHHTHHHHHHHHTSCTTSSCTTTE
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccccccccccCCCCCCcCCCCCchHHHHHHHHHHeeccCCccCCCCCe
Confidence 9999999999 9999999999999999999998778899999999999999999999999999999999
Q ss_pred EEcCCCCcccCCCCCcccccc
Q psy7223 136 VFNSEGHPLPVKGKNDFYREA 156 (166)
Q Consensus 136 VfnteaHp~~i~~~~~~~~~~ 156 (166)
|||||||||||+...+..+.+
T Consensus 455 VFnTEAHPl~i~~~~~~~~~~ 475 (478)
T 1nxc_A 455 IFNTEAHPFPILREQKKEIDG 475 (478)
T ss_dssp EECTTSCEEECCC--------
T ss_pred eecCCCCceecCCCCcccccC
Confidence 999999999999887766654
No 2
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=100.00 E-value=3.2e-56 Score=403.72 Aligned_cols=145 Identities=32% Similarity=0.574 Sum_probs=134.5
Q ss_pred CCccccchhhHHhhhccCCCCchhhhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecCC-------------------
Q psy7223 1 MDHLGCFSGGMFGLAAHTRPNSELFNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSSP------------------- 58 (166)
Q Consensus 1 m~hL~CF~pG~laLg~~~~~~~~~~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~~------------------- 58 (166)
||||+||+|||++|||+... +++++++|++|++||+++|.++||||+ |.|+...
T Consensus 305 ~~hL~cF~~G~~aLgg~~~~----~~~~~~~a~~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g 380 (503)
T 1hcu_A 305 SGHLASFGGGNFILGGILLN----EQKYIDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAG 380 (503)
T ss_dssp EEGGGGGHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHS
T ss_pred cchhhhhhhHHHHhcCcccc----cHHHHHHHHHHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCC
Confidence 79999999999999997655 488999999999999999999999999 7775322
Q ss_pred ----ccccccccc---------CCCCChhhHH-----HHHHHHHccccccceeecccccCC-CCCCCCchhHHHHHHHHH
Q psy7223 59 ----LRLVFLRAA---------SLPCQQNFRR-----NTALEKHCRTEYGYTGIKNVYQEN-PQQDDVQQSFFLAETLKY 119 (166)
Q Consensus 59 ----~~~y~LRPE---------R~TgD~~yrd-----f~ai~~~~r~~~G~a~l~dV~~~~-~~~~D~meSF~laETlKY 119 (166)
+++|+|||| |+||||+||| |++|+++|||++||++|+||++.+ +.++|+||||||||||||
T Consensus 381 ~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if~ai~k~~r~~~Gya~i~dV~~~~~~~~~D~meSF~laETLKY 460 (503)
T 1hcu_A 381 FWVTAPYYILRPETLESLYYAYRVTGDSKWQDLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFWFAEALKY 460 (503)
T ss_dssp CEEEECCBCCCCHHHHHHHHHHHHHCBHHHHHHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHHHHTHHHH
T ss_pred ceeccccccCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHhhccCCcccccccCCCCCCcCCccchHHHHHHHHH
Confidence 367999999 9999999999 999999999999999999999977 799999999999999999
Q ss_pred HHhhcCCCCCCCC-----CCeEEcCCCCcccCCCC
Q psy7223 120 LYLLFSDDSLLPL-----DQWVFNSEGHPLPVKGK 149 (166)
Q Consensus 120 lYLlFs~~~~~~l-----d~~VfnteaHp~~i~~~ 149 (166)
|||||+|++.++| |+||||||||||||+.+
T Consensus 461 lYLLFsd~~~i~L~~~~~d~~VFNTEAHPl~i~~~ 495 (503)
T 1hcu_A 461 AYLIFAEESDVQVQATGGNKFVFNTEAHPFSIRSS 495 (503)
T ss_dssp HHHHHSCCCSSSCCTTSCCCEEECTTSCEEECCC-
T ss_pred HheeccCCcccccccCCCCCeEEcCCCccccCCCc
Confidence 9999999999999 99999999999999874
No 3
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=100.00 E-value=7.8e-56 Score=403.58 Aligned_cols=145 Identities=37% Similarity=0.619 Sum_probs=134.2
Q ss_pred CCccccchhhHHhhhccCCCCchhhhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecC------------Cccccccc
Q psy7223 1 MDHLGCFSGGMFGLAAHTRPNSELFNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSS------------PLRLVFLR 65 (166)
Q Consensus 1 m~hL~CF~pG~laLg~~~~~~~~~~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~------------~~~~y~LR 65 (166)
|+||+||+|||++||++...+ ++|+++|++|+++|+++|.++||||+ |.|+.. .+++|+||
T Consensus 361 ~~hL~cF~gG~~aLgg~~~~~----~~~l~~a~~L~~tC~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LR 436 (538)
T 1x9d_A 361 MDHLVCFLPGTLALGVYHGLP----ASHMELAQELMETCYQMNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLR 436 (538)
T ss_dssp EEGGGGHHHHHHHHHHHTTCC----HHHHHHHHHHHHHHHHHHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCC
T ss_pred cchHhhhhhhHHHhcCcccCc----HHHHHHHHHHHHHHHHHHHhcccCCCceEEEeccCCCccccceeeeccCcccCCC
Confidence 799999999999999988664 77999999999999999999999999 777542 26789999
Q ss_pred cc---------CCCCChhhHH-----HHHHHHHcccccc-ceeeccccc-CCCCCCCCchhHHHHHHHHHHHhhcCCC-C
Q psy7223 66 AA---------SLPCQQNFRR-----NTALEKHCRTEYG-YTGIKNVYQ-ENPQQDDVQQSFFLAETLKYLYLLFSDD-S 128 (166)
Q Consensus 66 PE---------R~TgD~~yrd-----f~ai~~~~r~~~G-~a~l~dV~~-~~~~~~D~meSF~laETlKYlYLlFs~~-~ 128 (166)
|| |+|||++||| |++|+++|||++| |++|+||++ .++.++|+|||||||||||||||||||+ +
T Consensus 437 PE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggya~i~dV~~~~~~~~~D~mESFfLAETLKYlYLLFsd~~~ 516 (538)
T 1x9d_A 437 PETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGYSSINNVQDPQKPEPRDKMESFFLGETLKYLFLLFSDDPN 516 (538)
T ss_dssp CHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCBCCBSCTTCSSCCCBCSCBCHHHHHTHHHHHHHHHCCC-C
T ss_pred hHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCccccccccCCCCCCcCCCcccHHHHHHHHHHHHhcCCCCC
Confidence 99 9999999999 9999999999999 999999998 6678999999999999999999999999 9
Q ss_pred CCCCCCeEEcCCCCcccCCCC
Q psy7223 129 LLPLDQWVFNSEGHPLPVKGK 149 (166)
Q Consensus 129 ~~~ld~~VfnteaHp~~i~~~ 149 (166)
.++||+||||||||||||..+
T Consensus 517 ~i~Ld~~VFNTEAHPl~i~~~ 537 (538)
T 1x9d_A 517 LLSLDAYVFNTEAHPLPIWTP 537 (538)
T ss_dssp CSCTTTEEECTTSCEEECC--
T ss_pred cCcCCCeeecCCCccccCCCC
Confidence 999999999999999999754
No 4
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=100.00 E-value=5.1e-56 Score=400.07 Aligned_cols=144 Identities=30% Similarity=0.573 Sum_probs=133.8
Q ss_pred CCccccchhhHHhhhccCCCCchhhhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecCC-----------------cc
Q psy7223 1 MDHLGCFSGGMFGLAAHTRPNSELFNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSSP-----------------LR 60 (166)
Q Consensus 1 m~hL~CF~pG~laLg~~~~~~~~~~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~~-----------------~~ 60 (166)
|+||+||+|||++|||+... +++++++|++|++||+++|.++||||+ |.|+.+. ++
T Consensus 292 ~~hL~cF~~G~~aLgg~~~~----~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~ 367 (475)
T 2ri9_A 292 SQHLTCFDGGSFLLGGTVLD----RQDFIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSG 367 (475)
T ss_dssp EETGGGGHHHHHHHHHHHHT----CHHHHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEEC
T ss_pred cchHHHhHHHHHHhcccccc----cHHHHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceeccc
Confidence 79999999999999997654 488999999999999999999999999 7775431 46
Q ss_pred ccccccc---------CCCCChhhHH-----HHHHHHHccccccceeecccccCC-CCCCCCchhHHHHHHHHHHHhhcC
Q psy7223 61 LVFLRAA---------SLPCQQNFRR-----NTALEKHCRTEYGYTGIKNVYQEN-PQQDDVQQSFFLAETLKYLYLLFS 125 (166)
Q Consensus 61 ~y~LRPE---------R~TgD~~yrd-----f~ai~~~~r~~~G~a~l~dV~~~~-~~~~D~meSF~laETlKYlYLlFs 125 (166)
+|+|||| |+||||+||| |++|+++|||++||++|+||++.+ +.++|+|||||||||||||||||+
T Consensus 368 ~y~LRPE~iES~fylyR~TgD~~yr~~gw~~f~ai~k~~rt~~G~a~i~dV~~~~~~~~~D~meSF~laETLKYlYLLFs 447 (475)
T 2ri9_A 368 SYVLRPEVIESFYYAHRVTGKEIYRDWVWNAFVAINSTCRTDSGFAAVSDVNKANGGSKYDNQESFLFAEVMKYSYLAHS 447 (475)
T ss_dssp CBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSSSBCCBSCTTSGGGSSBBSCCCTHHHHTHHHHHHHTTS
T ss_pred ccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHccccCCcccccccCCCCCCcCCccchHHHHHHHHHHHhccc
Confidence 7999999 9999999999 999999999999999999999876 789999999999999999999999
Q ss_pred CCCCCCC-----CCeEEcCCCCcccCCC
Q psy7223 126 DDSLLPL-----DQWVFNSEGHPLPVKG 148 (166)
Q Consensus 126 ~~~~~~l-----d~~VfnteaHp~~i~~ 148 (166)
|++.++| |+||||||||||||..
T Consensus 448 d~~~i~l~~~~~d~~VFNTEAHPl~i~~ 475 (475)
T 2ri9_A 448 EDAAWQVQKGGKNTFVYNTEAHPISVAR 475 (475)
T ss_dssp CCCTTSCCSTTCCSEEECTTSCEEECCC
T ss_pred CCcccccccCCCCCeEEcCCCCCCCCCC
Confidence 9999999 9999999999999863
No 5
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=100.00 E-value=2.2e-55 Score=398.79 Aligned_cols=150 Identities=31% Similarity=0.534 Sum_probs=134.2
Q ss_pred CCccccchhhHHhhhccCCCCchh-------hhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecC-------------
Q psy7223 1 MDHLGCFSGGMFGLAAHTRPNSEL-------FNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSS------------- 57 (166)
Q Consensus 1 m~hL~CF~pG~laLg~~~~~~~~~-------~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~------------- 57 (166)
||||+||+|||++||+......+. +++++++|++|+++|+++|.++||||+ |.|+..
T Consensus 302 ~~hL~cF~gG~~aLg~~~~~~~~~a~~~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~ 381 (511)
T 1dl2_A 302 MDHLVCFMGGLLASGSTEGLSIHEARRRPFFSKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVG 381 (511)
T ss_dssp EEGGGGGHHHHHHHHHHTTCCHHHHTTSTTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSS
T ss_pred cchhhhchhHHHHhccccCCChhhhhhcccccHHHHHHHHHHHHHHHHHHhcCccCCCceEEEeecCCcccccccccccc
Confidence 799999999999999953332111 247999999999999999999999999 677422
Q ss_pred ------Cccccccccc---------CCCCChhhHH-----HHHHHHHcccccc------ceeecccccCCCCCCCCchhH
Q psy7223 58 ------PLRLVFLRAA---------SLPCQQNFRR-----NTALEKHCRTEYG------YTGIKNVYQENPQQDDVQQSF 111 (166)
Q Consensus 58 ------~~~~y~LRPE---------R~TgD~~yrd-----f~ai~~~~r~~~G------~a~l~dV~~~~~~~~D~meSF 111 (166)
.+++|+|||| |+||||+||| |++|+++|||++| |++|+||++.++.++|+||||
T Consensus 382 d~~~~~~d~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~G~~~~~gya~i~dV~~~~~~~~D~mESF 461 (511)
T 1dl2_A 382 DFFVKPLDRHNLQRPETVESIMFMYHLSHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESF 461 (511)
T ss_dssp SEEECGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHHEESTTCTTTCEECCEEESSSSSCEECSCCCHH
T ss_pred ceeeccCCcccCcCHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHhccccCCccccccccccccccCCCCcCCCcchh
Confidence 2689999999 9999999999 9999999999999 999999999878899999999
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCeEEcCCCCcccCCCCCcc
Q psy7223 112 FLAETLKYLYLLFSDDSLLPLDQWVFNSEGHPLPVKGKNDF 152 (166)
Q Consensus 112 ~laETlKYlYLlFs~~~~~~ld~~VfnteaHp~~i~~~~~~ 152 (166)
|||||||||||||+| .++||+||||||||||||+.+.+.
T Consensus 462 ~laETLKYlYLLFsd--~i~Ld~~VFNTEAHPl~i~~~~~~ 500 (511)
T 1dl2_A 462 WLAETLKYLYILFLD--EFDLTKVVFNTEAHPFPVLDEEIL 500 (511)
T ss_dssp HHHTHHHHHHHHTCS--CCCTTSEEECTTSCEEECCCHHHH
T ss_pred hHHHHHHHHHHHccc--cccCCceeecCCCcceecCCCCcc
Confidence 999999999999999 999999999999999999876654
No 6
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=94.71 E-value=0.022 Score=51.64 Aligned_cols=60 Identities=18% Similarity=0.210 Sum_probs=41.6
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecCC--ccc----cc-------cccc-----CCCCChhhHH-----H
Q psy7223 25 FNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSSP--LRL----VF-------LRAA-----SLPCQQNFRR-----N 78 (166)
Q Consensus 25 ~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~~--~~~----y~-------LRPE-----R~TgD~~yrd-----f 78 (166)
.+..++.|.+|++--.-++..|||||+ +++..+. ..+ .. |--| |+|||++|.+ +
T Consensus 123 d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~~~~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~ 202 (511)
T 1dl2_A 123 KTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHADGGASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVY 202 (511)
T ss_dssp HHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSGGGCEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTH
T ss_pred cHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCCCcccccccccceeeeHHHHHHHHCChHHHHHHHHHH
Confidence 478999999999998888866999999 3333321 000 00 1112 9999999999 6
Q ss_pred HHHHHH
Q psy7223 79 TALEKH 84 (166)
Q Consensus 79 ~ai~~~ 84 (166)
+.|.+.
T Consensus 203 ~~l~~~ 208 (511)
T 1dl2_A 203 EPLYKN 208 (511)
T ss_dssp HHHHHH
T ss_pred HHHHhc
Confidence 666654
No 7
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=93.23 E-value=0.036 Score=50.61 Aligned_cols=72 Identities=14% Similarity=0.232 Sum_probs=44.6
Q ss_pred chhhHHhhhccCCCCchhhhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecCCccccc------------cccc----
Q psy7223 7 FSGGMFGLAAHTRPNSELFNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSSPLRLVF------------LRAA---- 67 (166)
Q Consensus 7 F~pG~laLg~~~~~~~~~~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~~~~~y~------------LRPE---- 67 (166)
++||+|. +..+.. .+..++.|.+|++--.-++ .|||||+ +++..+...... |--|
T Consensus 174 ~LGGLLS--Ay~Lsg---d~~lL~kA~dLadrLlpAF-dTptgiP~~~vnl~~g~~~~~~~~~~s~lAe~GSl~LEF~~L 247 (538)
T 1x9d_A 174 ILGGLLS--AYHLSG---DSLFLRKAEDFGNRLMPAF-RTPSKIPYSDVNIGTGVAHPPRWTSDSTVAEVTSIQLEFREL 247 (538)
T ss_dssp HHHHHHH--HHHHHC---CHHHHHHHHHHHHHHGGGG-CSTTSCCCSEEETTTCCEECCTTCSEEEHHHHHSSHHHHHHH
T ss_pred hhhhhhh--HHHhcC---CHHHHHHHHHHHHHHHHhh-cCCCCCCcceeeecccccCCCCcCCCceeccccceeeeHHHH
Confidence 4577763 322222 3679999999999987777 5899999 333332111000 1112
Q ss_pred -CCCCChhhHH-----HHHHHHH
Q psy7223 68 -SLPCQQNFRR-----NTALEKH 84 (166)
Q Consensus 68 -R~TgD~~yrd-----f~ai~~~ 84 (166)
|+|||++|.+ ++.|.+.
T Consensus 248 S~LTGd~~Y~~~a~r~~~~l~~~ 270 (538)
T 1x9d_A 248 SRLTGDKKFQEAVEKVTQHIHGL 270 (538)
T ss_dssp HHHHCCTHHHHHHHHHHHHHHTC
T ss_pred HHHhCCcHHHHHHHHHHHHHHhc
Confidence 9999999999 5555543
No 8
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=90.95 E-value=0.19 Score=45.08 Aligned_cols=65 Identities=20% Similarity=0.187 Sum_probs=41.1
Q ss_pred chhhHHhhhccCCCCchhhhhHHHHHHHHHHHHHHHHHhhhhcce---eeeecCCcc--cc-----c-------cccc--
Q psy7223 7 FSGGMFGLAAHTRPNSELFNKYMDVAKGITNTCHEAYIQTATHIG---FKVSSSPLR--LV-----F-------LRAA-- 67 (166)
Q Consensus 7 F~pG~laLg~~~~~~~~~~~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~~~~--~y-----~-------LRPE-- 67 (166)
++||+|. +..+.. .+.+++.|.+|++--.-++ .|||||+ +++..+... .+ . |--|
T Consensus 110 ~LGGLLS--Ay~Lsg---d~~lL~kA~dLad~LlpAF-dTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~gsl~LEF~ 183 (478)
T 1nxc_A 110 FVGGLLS--AYYLSG---EEIFRKKAVELGVKLLPAF-HTPSGIPWALLNMKSGIGRNWPWASGGSSILAEFGTLHLEFM 183 (478)
T ss_dssp HHHHHHH--HHHHHC---CHHHHHHHHHHHHHHGGGG-CSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHHTTCHHHHH
T ss_pred hhhhhhh--hhhccC---CHHHHHHHHHHHHHHHHhh-cCCCCCCcceeecccccCCCCcccCCCCcccccccchhhhHH
Confidence 4677753 322222 2678999999999887777 4999999 333332111 00 0 1112
Q ss_pred ---CCCCChhhHH
Q psy7223 68 ---SLPCQQNFRR 77 (166)
Q Consensus 68 ---R~TgD~~yrd 77 (166)
|+|||++|.+
T Consensus 184 ~LS~lTGd~~Y~~ 196 (478)
T 1nxc_A 184 HLSHLSGDPVFAE 196 (478)
T ss_dssp HHHHHHCCTHHHH
T ss_pred HHHHHHCChHHHH
Confidence 9999999999
No 9
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=82.61 E-value=1.2 Score=40.11 Aligned_cols=57 Identities=14% Similarity=0.144 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcce---eeeecCC----ccccc------cccc-----CCCCChhhHH-----HHHHH
Q psy7223 26 NKYMDVAKGITNTCHEAYIQTATHIG---FKVSSSP----LRLVF------LRAA-----SLPCQQNFRR-----NTALE 82 (166)
Q Consensus 26 ~~~~~la~~l~~tC~~~y~~t~tglg---~~~~~~~----~~~y~------LRPE-----R~TgD~~yrd-----f~ai~ 82 (166)
+..++.|.+|++--.-++. |||||+ +++..+. ...-. |--| |+|||++|.+ ++.|.
T Consensus 131 ~~lL~kA~dLadrLlpAFd-TptgiP~~~vnl~~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~ 209 (503)
T 1hcu_A 131 NSLLRQAQTLANGLKVAFT-TPSGVPDPTVFFNPTVRRSGASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLL 209 (503)
T ss_dssp HHHHHHHHHHHHHHGGGGC-SSSSCCCSEEECSSSCEECCCSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhhc-CCCCCCcceeecccCCCCCCCCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHH
Confidence 5889999999998877774 999999 3333311 00000 1112 9999999999 55555
Q ss_pred H
Q psy7223 83 K 83 (166)
Q Consensus 83 ~ 83 (166)
+
T Consensus 210 ~ 210 (503)
T 1hcu_A 210 N 210 (503)
T ss_dssp S
T ss_pred h
Confidence 4
No 10
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=68.08 E-value=4.7 Score=36.01 Aligned_cols=57 Identities=14% Similarity=0.183 Sum_probs=37.7
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcce-eeee--cCC---ccccc------cccc-----CCCCChhhHH-----HHHHHH
Q psy7223 26 NKYMDVAKGITNTCHEAYIQTATHIG-FKVS--SSP---LRLVF------LRAA-----SLPCQQNFRR-----NTALEK 83 (166)
Q Consensus 26 ~~~~~la~~l~~tC~~~y~~t~tglg-~~~~--~~~---~~~y~------LRPE-----R~TgD~~yrd-----f~ai~~ 83 (166)
+..++.|.+|++--.-++. |||||+ .+++ .+. ...-. |--| |+|||++|.+ ++.|.+
T Consensus 118 ~~lL~kA~dLadrLlpAF~-TptgiP~~~vnl~~~~~~~~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~ 196 (475)
T 2ri9_A 118 DGLLDQSRNLADVLKFAFD-TPSGVPYNNINITSHGNDGATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLK 196 (475)
T ss_dssp HHHHHHHHHHHHHHGGGGC-SSSSCCCSEECTTTCCBCCCSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhc-CCCCCCCceeecccCCCcCCCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHh
Confidence 6889999999998877774 999999 3333 211 00000 1112 9999999999 555554
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=25.14 E-value=2.3e+02 Score=22.96 Aligned_cols=26 Identities=4% Similarity=0.114 Sum_probs=19.9
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhcc
Q psy7223 25 FNKYMDVAKGITNTCHEAYIQTATHI 50 (166)
Q Consensus 25 ~~~~~~la~~l~~tC~~~y~~t~tgl 50 (166)
.+++++.|+++++.+...+...+.|.
T Consensus 190 d~~~~~~A~~~~~~~~~~~~~~~~g~ 215 (388)
T 2gz6_A 190 QETLENVLAATVQEVMGDFLDQEQGL 215 (388)
T ss_dssp HHHHHHHHHHHHHHHHHTTEETTTTE
T ss_pred CHHHHHHHHHHHHHHHHHHhccCCCe
Confidence 37899999999999877665555553
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=23.87 E-value=52 Score=27.54 Aligned_cols=64 Identities=9% Similarity=-0.071 Sum_probs=38.1
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhhcceeeeecCCccccccccc------------CCCCChhhHH-----HHHHHHHccc
Q psy7223 25 FNKYMDVAKGITNTCHEAYIQTATHIGFKVSSSPLRLVFLRAA------------SLPCQQNFRR-----NTALEKHCRT 87 (166)
Q Consensus 25 ~~~~~~la~~l~~tC~~~y~~t~tglg~~~~~~~~~~y~LRPE------------R~TgD~~yrd-----f~ai~~~~r~ 87 (166)
.++++++|+++++..+...-..+.|=|+.|.... ..|..-+- |+|||+.|++ +.-+.++...
T Consensus 110 ~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~~-~~~knaisN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d 188 (349)
T 3k7x_A 110 KSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRPQ-MYYKNTPVNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVR 188 (349)
T ss_dssp CHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETTE-EEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBC
T ss_pred CchHHHHHHHHHHHHHHhCCCCCCCCceEecCCC-ccccchhhHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCC
Confidence 4899999999999873332233334445555432 11111111 8999999999 5556665544
Q ss_pred cc
Q psy7223 88 EY 89 (166)
Q Consensus 88 ~~ 89 (166)
+.
T Consensus 189 ~~ 190 (349)
T 3k7x_A 189 ED 190 (349)
T ss_dssp TT
T ss_pred CC
Confidence 43
No 13
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=20.66 E-value=3.6e+02 Score=22.29 Aligned_cols=52 Identities=8% Similarity=-0.033 Sum_probs=33.6
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhhcce-eeeecC---------Cccccccccc------------------CCCCChhhHH
Q psy7223 26 NKYMDVAKGITNTCHEAYIQTATHIG-FKVSSS---------PLRLVFLRAA------------------SLPCQQNFRR 77 (166)
Q Consensus 26 ~~~~~la~~l~~tC~~~y~~t~tglg-~~~~~~---------~~~~y~LRPE------------------R~TgD~~yrd 77 (166)
+++++.|+++++.+........+|.- ..|+.+ .++..+.||. ++|+|++|++
T Consensus 192 ~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~ 271 (402)
T 3gt5_A 192 QRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVP 271 (402)
T ss_dssp HHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHH
T ss_pred HHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHH
Confidence 78999999999887765544445543 333221 1233455664 6799999999
Done!