Query psy7224
Match_columns 297
No_of_seqs 171 out of 1393
Neff 6.7
Searched_HMMs 46136
Date Fri Aug 16 21:16:45 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7224.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7224hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PTZ00470 glycoside hydrolase f 100.0 3.2E-87 7E-92 661.9 17.7 275 3-286 147-513 (522)
2 KOG2431|consensus 100.0 6.5E-83 1.4E-87 599.0 15.4 275 2-286 166-537 (546)
3 KOG2204|consensus 100.0 4.1E-83 9E-88 617.1 12.6 277 3-287 254-620 (625)
4 PF01532 Glyco_hydro_47: Glyco 100.0 1.1E-81 2.4E-86 618.6 10.8 272 3-285 68-446 (452)
5 KOG2429|consensus 100.0 1.1E-72 2.4E-77 544.6 12.6 267 2-285 111-463 (622)
6 KOG2430|consensus 100.0 3.6E-60 7.8E-65 437.6 7.1 275 2-285 94-450 (587)
7 KOG2204|consensus 99.6 4.2E-16 9.2E-21 152.3 4.2 91 206-296 170-261 (625)
8 KOG2431|consensus 99.5 2.7E-15 5.9E-20 142.7 1.9 85 207-296 90-174 (546)
9 PTZ00470 glycoside hydrolase f 99.5 4.6E-15 1E-19 148.0 3.5 83 209-296 70-154 (522)
10 KOG2429|consensus 99.3 8.3E-13 1.8E-17 129.4 3.3 88 209-296 31-119 (622)
11 PF01532 Glyco_hydro_47: Glyco 99.2 1E-12 2.2E-17 129.9 -0.2 75 218-296 1-76 (452)
12 KOG2430|consensus 98.6 1.3E-08 2.8E-13 95.7 0.9 88 209-296 7-102 (587)
13 cd00249 AGE AGE domain; N-acyl 97.9 5.7E-05 1.2E-09 72.3 10.1 213 10-238 114-352 (384)
14 PF03663 Glyco_hydro_76: Glyco 97.7 1.8E-05 3.8E-10 76.6 2.0 186 19-270 96-299 (370)
15 COG1331 Highly conserved prote 97.5 0.00015 3.2E-09 74.3 6.3 105 8-113 465-569 (667)
16 cd00249 AGE AGE domain; N-acyl 97.3 0.0054 1.2E-07 58.7 13.5 199 13-223 55-275 (384)
17 PF07944 DUF1680: Putative gly 96.9 0.0034 7.3E-08 63.5 8.2 79 14-110 128-206 (520)
18 PF07470 Glyco_hydro_88: Glyco 96.7 0.0021 4.5E-08 61.0 5.1 170 16-265 30-203 (336)
19 PF07944 DUF1680: Putative gly 95.9 0.023 5E-07 57.5 7.3 169 40-219 25-207 (520)
20 PF07221 GlcNAc_2-epim: N-acyl 94.8 0.021 4.6E-07 54.2 3.0 174 14-238 142-325 (346)
21 cd04791 LanC_SerThrkinase Lant 94.8 0.16 3.5E-06 47.2 8.9 141 19-223 91-233 (321)
22 PF06917 Pectate_lyase_2: Peri 93.1 0.14 3.1E-06 51.1 5.0 94 28-121 11-112 (557)
23 COG3533 Uncharacterized protei 93.0 0.17 3.6E-06 50.7 5.3 73 16-109 136-208 (589)
24 cd04791 LanC_SerThrkinase Lant 91.9 0.31 6.7E-06 45.3 5.6 86 17-113 145-231 (321)
25 COG1331 Highly conserved prote 90.6 2 4.3E-05 44.7 10.1 164 16-233 416-582 (667)
26 cd04794 euk_LANCL eukaryotic L 88.9 2.6 5.5E-05 40.1 9.1 183 19-222 109-305 (343)
27 COG2942 N-acyl-D-glucosamine 2 86.3 3.6 7.7E-05 40.2 8.2 137 15-155 178-378 (388)
28 cd04792 LanM-like LanM-like pr 86.2 3.8 8.2E-05 43.7 9.3 183 17-224 593-784 (825)
29 PF07470 Glyco_hydro_88: Glyco 86.0 1.2 2.6E-05 42.2 4.9 95 20-127 76-174 (336)
30 cd04793 LanC LanC is the cycla 67.9 42 0.00091 32.2 9.7 141 21-227 182-333 (382)
31 TIGR02474 pec_lyase pectate ly 67.0 7.5 0.00016 36.7 4.1 44 85-128 47-93 (290)
32 PF07221 GlcNAc_2-epim: N-acyl 66.7 3.1 6.7E-05 39.4 1.5 190 17-271 87-290 (346)
33 PF11329 DUF3131: Protein of u 58.6 1E+02 0.0023 30.1 10.3 206 15-232 38-260 (367)
34 COG4225 Predicted unsaturated 58.2 22 0.00049 34.3 5.5 80 17-121 42-122 (357)
35 COG3533 Uncharacterized protei 58.0 32 0.0007 35.0 6.8 115 94-215 81-206 (589)
36 PF03663 Glyco_hydro_76: Glyco 57.5 9.5 0.00021 36.9 3.1 85 24-113 168-255 (370)
37 PF06662 C5-epim_C: D-glucuron 55.3 15 0.00032 32.5 3.6 77 20-106 101-186 (189)
38 cd04434 LanC_like LanC-like pr 55.1 39 0.00085 31.0 6.7 86 20-113 168-253 (343)
39 cd04434 LanC_like LanC-like pr 49.2 72 0.0016 29.2 7.5 193 12-221 100-300 (343)
40 PF06917 Pectate_lyase_2: Peri 46.4 18 0.00039 36.6 3.0 98 8-121 381-479 (557)
41 cd04794 euk_LANCL eukaryotic L 45.6 43 0.00094 31.6 5.5 74 19-114 232-305 (343)
42 PF06662 C5-epim_C: D-glucuron 45.5 16 0.00035 32.3 2.3 34 88-121 39-72 (189)
43 cd04792 LanM-like LanM-like pr 45.0 1.4E+02 0.003 31.9 9.6 72 20-113 550-621 (825)
44 COG4225 Predicted unsaturated 44.0 80 0.0017 30.6 6.8 190 20-225 88-306 (357)
45 COG4403 LcnDR2 Lantibiotic mod 43.4 27 0.00059 37.7 3.9 70 20-107 751-821 (963)
46 PRK11097 endo-1,4-D-glucanase; 42.6 1.1E+02 0.0025 29.9 7.8 102 20-129 125-228 (376)
47 PF09492 Pec_lyase: Pectic aci 40.4 29 0.00063 32.7 3.3 39 91-129 51-89 (289)
48 KOG2787|consensus 38.3 25 0.00054 33.9 2.4 26 20-45 335-360 (403)
49 cd04793 LanC LanC is the cycla 37.4 52 0.0011 31.5 4.7 76 20-114 253-328 (382)
50 KOG2787|consensus 35.2 67 0.0015 31.0 4.8 72 20-113 289-360 (403)
51 PF12060 DUF3541: Domain of un 28.5 22 0.00049 32.0 0.4 15 199-213 36-50 (227)
52 PF13204 DUF4038: Protein of u 28.2 17 0.00036 34.0 -0.5 64 97-160 83-156 (289)
53 COG4403 LcnDR2 Lantibiotic mod 27.3 1.2E+02 0.0025 33.1 5.4 38 84-122 652-689 (963)
54 PF05426 Alginate_lyase: Algin 27.1 28 0.0006 31.6 0.8 27 196-222 65-91 (272)
55 PF01270 Glyco_hydro_8: Glycos 22.9 1E+02 0.0023 29.4 3.9 105 14-128 116-225 (342)
56 TIGR01577 oligosac_amyl oligos 21.0 1.1E+02 0.0023 31.8 3.8 36 99-134 560-595 (616)
No 1
>PTZ00470 glycoside hydrolase family 47 protein; Provisional
Probab=100.00 E-value=3.2e-87 Score=661.94 Aligned_cols=275 Identities=44% Similarity=0.764 Sum_probs=251.3
Q ss_pred cCcccCccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccc
Q psy7224 3 QKIELSVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELG 82 (297)
Q Consensus 3 ~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~g 82 (297)
++..|||||||||+||||||||+||+|++||+||+||||+|+|||+||||||++.||+++|..+..+|. .+.+++||+|
T Consensus 147 ~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~dLgd~Ll~AFdTptgiP~~~vnl~~g~~~~~~~~-~~~~~lAe~g 225 (522)
T PTZ00470 147 TGLGVSVFETTIRVLGGLLSAYDLTGDEMYLEKAREIADRLLPAFNEDTGFPASEINLATGRKSYPGWA-GGCSILSEVG 225 (522)
T ss_pred CCCeeeeeeeehhhHhHHHHHHHHcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCCCcccC-CCccchhhhh
Confidence 468999999999999999999999999999999999999999999999999999999999998877775 4778999999
Q ss_pred cceeehhhhHhhhCChhhHHHHHHHHHHHHhcCCC-CCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCC
Q psy7224 83 TLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEKP-NGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKED 161 (297)
Q Consensus 83 s~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~-~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~ 161 (297)
|++|||++||++||||+|+++|+++++.|++.++. +||+|+.||+.+|+|.++.+++||++|||||||||+|+|+|+.+
T Consensus 226 Sl~LEF~~LS~lTGd~kY~~~a~~i~~~l~~~~~~~~GL~p~~i~~~~g~~~~~~~siGa~~DS~YEYLlK~~il~~~~d 305 (522)
T PTZ00470 226 TLQLEFNYLSEITGDPKYAEYVDKVMDALFSMKPAINGLYPIFLNPDAGRFCGNHISLGALGDSYYEYLLKQWLYTNGRE 305 (522)
T ss_pred hHHHHHHHHHHhhCCHHHHHHHHHHHHHHHhcCCCCCCccceEECCccCccCCCceeecCCcchhHHHHHHHHHhcCCCc
Confidence 99999999999999999999999999999987765 89999999999999999999999999999999999999998766
Q ss_pred CC------------------------------------------------------------------------------
Q psy7224 162 TE------------------------------------------------------------------------------ 163 (297)
Q Consensus 162 ~~------------------------------------------------------------------------------ 163 (297)
..
T Consensus 306 ~~~~~~~~~a~~~i~~~l~~~s~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~~~~~~~a~~l~~t 385 (522)
T PTZ00470 306 ERYRRLFVESAKGIIEHLYKRSPKGLTYIAEMDGGSLTNKMEHLACFAGGMFALGAAINITPDDEKSARYMEVGEEVTKT 385 (522)
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcEEEeeccCCcCcchhhhhhhhccchhhhcccccccccccccHHHHHHHHHHHHH
Confidence 32
Q ss_pred ------------CCccccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcccccccc
Q psy7224 164 ------------GPESFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAW 231 (297)
Q Consensus 164 ------------~PE~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~ 231 (297)
+||+|.|..+.........+++|+||||+|||+|||||+|||++||+|||+||++|+++||+.+|||+
T Consensus 386 C~~~Y~~~~tGl~PE~~~~~~~~~~~~~~~~d~~Y~LRPE~iES~fylyR~TgD~~yre~gW~~f~ai~k~~rt~~Gya~ 465 (522)
T PTZ00470 386 CYETYATSPTGLGPEIFHFDPNSGDISPNVHDSHYILRPETVESIFILYRLTGDPKYREWAWKIFQAIEKHCKTENGYSG 465 (522)
T ss_pred HHHHHHhcccCCCCceEEeccCccccccccCCCCCCCChhHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCccccc
Confidence 56666665432222234567899999999999999999999999999999999999999999999999
Q ss_pred ccccccCC-CCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcccccccccccccccc
Q psy7224 232 GKNELKPL-SRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLT 286 (297)
Q Consensus 232 ~~Dv~~p~-s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~ 286 (297)
+.||..+. ...|+||||| ||||||||||+|++++++++++|||||.-
T Consensus 466 i~dV~~~~~~~~D~MeSFf--------laETLKYlYLlFsd~~~i~ld~~VFnTEA 513 (522)
T PTZ00470 466 LKNVLTVHPQQDDFQESFF--------LAETLKYLYLLFQPDHVIPLDKYVFNTEA 513 (522)
T ss_pred ccccCCCCCCcCCcccchh--------HHHHHHHHHheecCccccccCCeEECCCC
Confidence 99999754 3449999999 99999999999999999999999999873
No 2
>KOG2431|consensus
Probab=100.00 E-value=6.5e-83 Score=598.96 Aligned_cols=275 Identities=37% Similarity=0.654 Sum_probs=254.7
Q ss_pred CcCcccCccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceeccc
Q psy7224 2 KQKIELSVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSEL 81 (297)
Q Consensus 2 ~~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~ 81 (297)
+++.+||+||||||+||||||||.|||+.+||+||+||||||+|||.+|++|||..||+.+|.+.++.|. +.+++||+
T Consensus 166 ~~~~~VNlFEtTIRvLGGLLSayHLsg~~~~L~kA~dlgdrLl~AF~sps~IPysdVnL~~~~A~~p~~~--~~SStaEv 243 (546)
T KOG2431|consen 166 EKDRDVNLFETTIRVLGGLLSAYHLSGDEMFLNKAEDLGDRLLPAFSSPSPIPYSDVNLGTGTAHPPRWT--GDSSTAEV 243 (546)
T ss_pred ccccceehhhhhHHHHhhhhhhhccccchhHHHHHHHHHHHHHHhhcCCCCCCcceeecCCCcccCCCCC--Cccchhhh
Confidence 5688999999999999999999999999999999999999999999999999999999999999999885 67889999
Q ss_pred ccceeehhhhHhhhCChhhHHHHHHHHHHHHhcCC--CCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCC
Q psy7224 82 GTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEK--PNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNK 159 (297)
Q Consensus 82 gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~--~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~ 159 (297)
.|+||||+.||++|||++|++.|.++++++..... .+||.|.+||+.+|.|..+.+++||.+|||||||+|+||++|+
T Consensus 244 ttiQlEfr~Ls~ltgd~kY~~~a~kv~ehih~~~~~~~dGLvPi~in~~tG~F~~~tI~lGaRgDSyYEYLlKQwlQtg~ 323 (546)
T KOG2431|consen 244 TTIQLEFRYLSRLTGDPKYEELAEKVTEHIHGLGKKKHDGLVPIFINPNTGLFVGSTITLGARGDSYYEYLLKQWLQTGK 323 (546)
T ss_pred eeeeeeHHHHHhhcCCchHHHHHHHHHHHHhccCccccCCeeeEEEcCCCCccccceEEeccccchHHHHHHHHHHHccc
Confidence 99999999999999999999999999999998654 4699999999999999999999999999999999999999999
Q ss_pred CCCC----------------------------------------------------------------------------
Q psy7224 160 EDTE---------------------------------------------------------------------------- 163 (297)
Q Consensus 160 ~~~~---------------------------------------------------------------------------- 163 (297)
+...
T Consensus 324 ~~~~l~~dy~~am~gv~~~Llr~S~P~~~~fiGEl~~G~~fsPKMDHLVCFlpGtL~lG~~~Gl~~~~~hl~lA~~l~~T 403 (546)
T KOG2431|consen 324 SLTYLRDDYIEAMEGVRKHLLRQSKPNKLWFIGELPHGLQFSPKMDHLVCFLPGTLALGSTNGLPASEEHLELAQELMET 403 (546)
T ss_pred chhHHHHHHHHHHHHHHHHHHhcCCCcceEEEEecccccccCcccceEEEeecchhhhccccCCCcchHHHHHHHHHHHH
Confidence 8743
Q ss_pred ------------CCccccccchhh----hhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcccc
Q psy7224 164 ------------GPESFKFTDTLE----AKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYV 227 (297)
Q Consensus 164 ------------~PE~~~~~~~~~----~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~ 227 (297)
+||++.|+.... ...+|+.|+|++||||+|||+|||||+|||.+||||||+||++|+++.+..+
T Consensus 404 CyqMY~~~~TGLaPEIv~Fn~~~~~~~~DiyvKp~D~HnLlRPEtVESlfylYriT~D~kYqewGW~if~sfekytrv~~ 483 (546)
T KOG2431|consen 404 CYQMYRQNPTGLAPEIVHFNLYPQPGKNDIYVKPLDRHNLLRPETVESLFYLYRITGDRKYQEWGWEIFQSFEKYTRVPS 483 (546)
T ss_pred HHHHHccCcCCCCceEEEEeccCCCccCceeeccchhhcccChHHHhhhheeeEecCCchHHHHhHHHHHHHHHhcccCC
Confidence 788888874322 2346889999999999999999999999999999999999999999999987
Q ss_pred -ccccccccccCCCC-CCCCCCCCCCCcchhhHHhhhhHHHHhcCcc-cccccccccccccc
Q psy7224 228 -TYAWGKNELKPLSR-RGHSGSIFGSAELGMTIIDGLDTLYIMGLTD-EYEDGKKWVAESLT 286 (297)
Q Consensus 228 -gya~~~Dv~~p~s~-~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~-e~~~~~~~V~nt~~ 286 (297)
||..+.||....++ +|.||||| ++||||||||+|.|+ +..++++|||||.-
T Consensus 484 ggytSi~nV~~~~~~~RDkMESF~--------laETLKYLYLLf~DD~~ilpLdk~VFNTEa 537 (546)
T KOG2431|consen 484 GGYTSIDNVKDQKPKRRDKMESFW--------LAETLKYLYLLFSDDQSILPLDKWVFNTEA 537 (546)
T ss_pred CCccchhhhhhcCCchhhhHHHHH--------HHHHHHHHHHhhcCCcccccchheEeccCC
Confidence 99999999874444 49999999 999999999999887 78999999999874
No 3
>KOG2204|consensus
Probab=100.00 E-value=4.1e-83 Score=617.06 Aligned_cols=277 Identities=55% Similarity=0.959 Sum_probs=267.4
Q ss_pred cCcccCccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccc
Q psy7224 3 QKIELSVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELG 82 (297)
Q Consensus 3 ~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~g 82 (297)
+++++||||||||++|||||||.||||+++++||+++||+|||||+||+|||+..+|.++|...+++|.+++.++|||.|
T Consensus 254 v~~~~SvFE~NirF~GGllsay~lsge~~f~~kA~~igdkLLpAfntptGIp~~~vn~ksG~~~n~~wasgg~SILaE~g 333 (625)
T KOG2204|consen 254 VPIELSVFETNIRFVGGLLSAYALSGEEMFLEKAPEIGDKLLPAFNTPTGIPKALVNNKSGDADNYGWASGGSSILAEFG 333 (625)
T ss_pred ccchhheeeeeeeeehhhHHHhhhcccHHHHHhhHHHHHHhhhcccCCCCCchhhhccccCccCCcccccCcchHhhhcC
Confidence 57899999999999999999999999999999999999999999999999999999999999999999988999999999
Q ss_pred cceeehhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCC
Q psy7224 83 TLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDT 162 (297)
Q Consensus 83 s~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~ 162 (297)
|++|||.+||++||||.|.+++++|+++|.+..++.||+|++|+|++|.|...+.++||.+|||||||+|.|+++++++.
T Consensus 334 tlhlef~~LS~ltg~P~~~ekv~~IRk~l~k~ekP~GLypnYinP~sg~wgq~~tslg~lgDSfyeyllK~wl~s~kTd~ 413 (625)
T KOG2204|consen 334 TLHLEFSYLSKLTGNPTFAEKVVKIRKVLNKSEKPHGLYPNYINPSSGEWGQHHTSLGALGDSFYEYLLKAWLQSDKTDC 413 (625)
T ss_pred ceeeehHHhhhccCCchHHHHHHHHHHHHHhhcCCCCCCcccccCCCCchhhHHhHHhhhhhhHHHHHHHHHhhcCCcch
Confidence 99999999999999999999999999999999999999999999999999998899999999999999999999999986
Q ss_pred C-------------------------------------------------------------------------------
Q psy7224 163 E------------------------------------------------------------------------------- 163 (297)
Q Consensus 163 ~------------------------------------------------------------------------------- 163 (297)
.
T Consensus 414 eak~my~~am~Ai~~~li~~S~~s~ltyi~e~~~g~lehKm~hlacf~gGm~algA~~~~~~~~~~~y~el~~eia~Tch 493 (625)
T KOG2204|consen 414 EAKGMYEDAMIAIEKYLIFKSDGSGLTYISEWNGGGLEHKMGHLACFAGGMFALGAIKGDTVGSSKHYLELGGEIATTCH 493 (625)
T ss_pred HHHHhHHHHHHHHHhhheeccCCCCeEEEEecCCCchhhhhchhhcccccceeeccccCCCcchhHHHHHHhHHHHHHHH
Confidence 4
Q ss_pred ----------CCccccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcccccccccc
Q psy7224 164 ----------GPESFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGK 233 (297)
Q Consensus 164 ----------~PE~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~ 233 (297)
+||+|+|+.+.|+.+++.++.+|+||||+|||+|||||+|||++||+|||+++++++++||+..||.++.
T Consensus 494 esY~rt~T~lgpesf~fn~~~ea~~~r~~EsyyILrpEviEs~fYlwRlT~d~kyR~wgweavqalek~cr~~~G~~glk 573 (625)
T KOG2204|consen 494 ESYTRTTTKLGPESFWFNHGVEAFAVRKVESYYILRPEVIESYFYLWRLTGDQKYRSWGWEAVQALEKYCRVAKGYSGLK 573 (625)
T ss_pred HHHhccccccChhhhcccCccchhhhhcccceeecCHHHHHHHHHHhhhcCChhHHHHHHHHHHHHHHhcccccchhhhh
Confidence 8999999999998888889999999999999999999999999999999999999999999999999999
Q ss_pred ccccCCCCC-CCCCCCCCCCcchhhHHhhhhHHHHhcCccccccccccccccccc
Q psy7224 234 NELKPLSRR-GHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLTL 287 (297)
Q Consensus 234 Dv~~p~s~~-d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~f 287 (297)
||..+.+.. |.|+||| ||||||||||+|++++..++++|||||.--
T Consensus 574 dvY~~~~~~ddvqqSFf--------lAEtLKYlyLlFSdddllsLD~wVFNteAH 620 (625)
T KOG2204|consen 574 DVYESGPKVDDVQQSFF--------LAETLKYLYLLFSDDDLLSLDKWVFNTEAH 620 (625)
T ss_pred HhhhCCCcccchHHHHH--------HHHHHHHHhheecCCCcccHHHhhhccCCc
Confidence 999876665 7899999 999999999999999999999999998643
No 4
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 47 GH47 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.113 from EC). Alpha-mannosidase is involved in the maturation of Asn-linked oligo-saccharides []. The enzyme hydrolyses terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide man(9)(glcnac)(2) in a calcium-dependent manner. The mannose residues are trimmed away to produce, first, man(8)glcnac(2), then a man(5)(glcnac)(2) structure.; GO: 0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, 0005509 calcium ion binding, 0016020 membrane; PDB: 2RI9_A 2RI8_B 1KRE_B 1KKT_A 1KRF_A 1NXC_A 1G6I_A 1DL2_A 1HCU_A 1FO2_A ....
Probab=100.00 E-value=1.1e-81 Score=618.59 Aligned_cols=272 Identities=42% Similarity=0.739 Sum_probs=226.1
Q ss_pred cCc-ccCccchhhhhhhhhhhhhccC--CCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceec
Q psy7224 3 QKI-ELSVFETTIRFIGAILTLYSFT--GDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILS 79 (297)
Q Consensus 3 ~~~-~vsvFEttIR~LGGLLSAy~Ls--~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lA 79 (297)
++. .|||||||||+||||||||+|| +|++||+||++|||+|+|||+||+|||+++||++++... .|. .+.+++|
T Consensus 68 ~~~~~vs~fEt~iR~lGgLLSay~ls~~~d~~lL~kA~~lad~Ll~aF~t~~g~P~~~~n~~~~~~~--~~~-~~~~~la 144 (452)
T PF01532_consen 68 QDDSTVSVFETTIRVLGGLLSAYDLSGEGDPILLSKAVELADRLLPAFDTPTGIPYPRVNLRTGGKN--RWP-GGESSLA 144 (452)
T ss_dssp SSSSEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSSSSS---SEEETTTCEEE--TTC-CGEEEHH
T ss_pred ccceeechHHhhhHhhhhhHHHHHHHhccchHHHHHHHHHHHHHHHhccCCCccccceeeecccCCC--CCC-CCccccc
Confidence 344 7999999999999999999999 999999999999999999999999999999999775443 232 3467899
Q ss_pred ccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcC---CCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHh
Q psy7224 80 ELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIE---KPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQ 156 (297)
Q Consensus 80 e~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~---~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l 156 (297)
|+||++|||.+||++||||+|+++|+++++.|++.+ +.+||+|..||+.+|+|.++.+++||++|||||||+|+|+|
T Consensus 145 ~~gs~~lEf~~LS~lTgd~kY~~~a~~~~~~l~~~~~~~~~~gL~p~~id~~~g~~~~~~~~~Ga~~DS~YEYLlK~~lL 224 (452)
T PF01532_consen 145 EAGSLQLEFTRLSQLTGDPKYFDAADRIYDALWRSQNRSKIPGLFPNFIDPSTGKWTSSSISLGAGGDSFYEYLLKMYLL 224 (452)
T ss_dssp HHCSSHHHHHHHHHHHS-THHHHHHHHHHHHHHCCCCCHSBTTB-BSEEETTTS-BSSTEE-SSTTTHHHHHHHHHHHHH
T ss_pred ccccceechhHHHHHhhccHHHHHHHHHHHHHHHhhhccCCcccCcceecCCcCcccccccccCCCcchHHHhhhhhhhh
Confidence 999999999999999999999999999999999843 48999999999999999999999999999999999999999
Q ss_pred hCCCCCC-------------------------------------------------------------------------
Q psy7224 157 SNKEDTE------------------------------------------------------------------------- 163 (297)
Q Consensus 157 ~g~~~~~------------------------------------------------------------------------- 163 (297)
+|+++..
T Consensus 225 ~g~~d~~~~~~~~~a~~~i~~~Ll~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~hLsCF~pG~l~Lg~~~~~~~~~~~~A 304 (452)
T PF01532_consen 225 LGGTDEQYRDMYDEAVDAIKKHLLFRPSTPGDYDLLFLGEYSTGGGGRLSPKMDHLSCFLPGMLALGAKLFNDEGDLELA 304 (452)
T ss_dssp TTTTTHHHHHHHHHHHHHHHHHTEEEBTTTT--T-EEE-EEETTTTTEEESEEECGGGGHHHHHHHHHHTTTCHHHHHHH
T ss_pred cCccchHHHHHHHHHHHHHHHHhhccCCCCCccceeEeeeeecccCccccccccchhhcchhHHHHhhcccCchhHHHHH
Confidence 9976643
Q ss_pred ------------------CCccccccchhhh---------hhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHH
Q psy7224 164 ------------------GPESFKFTDTLEA---------KAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYV 216 (297)
Q Consensus 164 ------------------~PE~~~~~~~~~~---------~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~ 216 (297)
+||.+.|.++.+. ..+++.+++|+||||+|||+|||||+||||+||+|||+||
T Consensus 305 ~~l~~~C~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~if 384 (452)
T PF01532_consen 305 EELTETCYWLYKSTPTGLGPEIFSFDPCEENCQWDEERKDFMIKISDPRYLLRPETIESLFYLYRATGDPKYREWGWDIF 384 (452)
T ss_dssp HHHHHHHHHHHHTSSSSS--SEEEESCSCG--TEETGGCSCCHHGGG--B-S--HHHHHHHHHHHHH-BHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcccCCCceEEEeeccccccccchhhcccccccccccccchhhhhhheeEEEEEcCCchHHHHHHHHH
Confidence 7888888764311 1234577899999999999999999999999999999999
Q ss_pred HHHHHhhccccccccccccccCCCC-CCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccccccccccc
Q psy7224 217 QMMKHAWDNYVTYAWGKNELKPLSR-RGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESL 285 (297)
Q Consensus 217 ~a~~~~~~~y~gya~~~Dv~~p~s~-~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~ 285 (297)
++|+++||+.+||+++.||..+.+. .|+||||| +|||||||||||++++..++++|||||.
T Consensus 385 ~ai~k~~r~~~G~a~i~dv~~~~~~~~D~meSf~--------laETlKYlYLlFsd~~~~~ld~~VfnTe 446 (452)
T PF01532_consen 385 QAIEKYCRTECGYAGIKDVTSDPPQKDDRMESFF--------LAETLKYLYLLFSDPDVISLDEYVFNTE 446 (452)
T ss_dssp HHHHHHTEETTEE--BSETTSSSSCBBS-B-CHH--------HHTHHHHHHHHTSSTTTTSTTSEEE-TT
T ss_pred HHHHHhcccceehhhhcccCcCCcccCCCcccee--------hHhhhHHHHhhcCCcccCCCCCEEECCC
Confidence 9999999999999999999965444 49999999 9999999999999999999999999986
No 5
>KOG2429|consensus
Probab=100.00 E-value=1.1e-72 Score=544.56 Aligned_cols=267 Identities=31% Similarity=0.457 Sum_probs=240.5
Q ss_pred CcCcccCccchhhhhhhhhhhhhccC-CC-----------chHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCC
Q psy7224 2 KQKIELSVFETTIRFIGAILTLYSFT-GD-----------PMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYA 69 (297)
Q Consensus 2 ~~~~~vsvFEttIR~LGGLLSAy~Ls-~d-----------~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~ 69 (297)
++|.+|||||||||+||||||||-++ .| -.||..|+++|+||||||+|||||||++||++.|+....
T Consensus 111 d~d~~VqVFEttIRVlGGLLSAHllA~~~~~~~~~~~~y~g~LLrLA~dlA~RLLPAF~T~TGiPy~~vNLk~GV~~~E- 189 (622)
T KOG2429|consen 111 DIDSTVQVFETTIRVLGGLLSAHLLAKKDPVGVFLGPDYDGELLRLAEDLARRLLPAFETPTGIPYGRVNLKYGVDKGE- 189 (622)
T ss_pred ccCCeeEEEEEehhhhhhHHHHHHhhccCccCccccCCCCchHHHHHHHHHHhhcccccCCCCCCcceeehhcCCCCCC-
Confidence 57899999999999999999999999 33 259999999999999999999999999999999998764
Q ss_pred cCCCCcceecccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHH
Q psy7224 70 WASGSASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEY 149 (297)
Q Consensus 70 ~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEY 149 (297)
..++|.|.+||+.|||..||++||||+|.+.|+++.+.||+.++..||++++||+.||+|.....+|||+.||||||
T Consensus 190 ---t~~tctAg~gslllEFg~LSrLTGD~~fE~vA~~A~~~lW~~RS~igLlGn~idV~tG~W~~~~sGIGAgiDSfyEY 266 (622)
T KOG2429|consen 190 ---TTETCTAGAGSLLLEFGTLSRLTGDPKFEKVARRALDALWSLRSGIGLLGNHIDVQTGEWTAPDSGIGAGIDSFYEY 266 (622)
T ss_pred ---CcceecccccceeeehhhhHHhhCCcHHHHHHHHHHHHHHhhcCCCCcccceeeccccceeccccccccchHHHHHH
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCCCC------------------------------------------------------------------
Q psy7224 150 LLKAWIQSNKEDTE------------------------------------------------------------------ 163 (297)
Q Consensus 150 LlK~~~l~g~~~~~------------------------------------------------------------------ 163 (297)
|+|.|||+|+.+..
T Consensus 267 llK~yILfgd~e~lemf~ea~~ai~~y~r~~~wY~~V~m~~G~v~~p~~dSLqAfwpGlqvLaGDvd~A~~~h~~y~~vw 346 (622)
T KOG2429|consen 267 LLKGYILFGDPELLEMFNEAYEAIQKYTRKGPWYVNVNMDSGSVSLPWFDSLQAFWPGLQVLAGDVDDAIRTHLMYFSVW 346 (622)
T ss_pred HHHHheecCCHHHHHHHHHHHHHHHHHhhcCCeEEEEecCCCceehHHHhhHHhhccchhhhhcchHHHHHHHHHHHHHH
Confidence 99999999988753
Q ss_pred -----CCccccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccC
Q psy7224 164 -----GPESFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKP 238 (297)
Q Consensus 164 -----~PE~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p 238 (297)
.||.+.+.... ....-..|+||||.|||.|||||+|+||-|.+.|..|.++++++.++.||||.++||..
T Consensus 347 kkyG~lPEryN~~~~~----~~~~~~~YPLRPElvEStyyLYrATkdp~yL~vG~~~l~sLe~~~k~~CGfAti~nV~~- 421 (622)
T KOG2429|consen 347 KKYGFLPERYNLATQE----PPPKREGYPLRPELVESTYYLYRATKDPFYLHVGEDMLKSLEKYTKVKCGFATIRNVIT- 421 (622)
T ss_pred HHcCCCcccccccCCC----CCCCcccCCCCHHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHhccCCccceeeeehhh-
Confidence 45555554321 12244579999999999999999999999999999999999999999999999999986
Q ss_pred CCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcccccc--ccc-cccccc
Q psy7224 239 LSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYED--GKK-WVAESL 285 (297)
Q Consensus 239 ~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~--~~~-~V~nt~ 285 (297)
.+.+|+||||| |+||+|||||+|+++.++. ..+ ++|.|.
T Consensus 422 ~~ledrMESFF--------LaET~KYLYLLFD~~n~ih~~g~~~~ifsTE 463 (622)
T KOG2429|consen 422 HSLEDRMESFF--------LAETLKYLYLLFDDDNPIHNSGSDSVIFSTE 463 (622)
T ss_pred cchHHHHHHHH--------HHHHHhHHheeecCCchhhccCCceeEEeeC
Confidence 45669999999 9999999999999987543 333 688776
No 6
>KOG2430|consensus
Probab=100.00 E-value=3.6e-60 Score=437.65 Aligned_cols=275 Identities=29% Similarity=0.410 Sum_probs=234.4
Q ss_pred CcCcccCccchhhhhhhhhhhhhccCC-------------CchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCC
Q psy7224 2 KQKIELSVFETTIRFIGAILTLYSFTG-------------DPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNY 68 (297)
Q Consensus 2 ~~~~~vsvFEttIR~LGGLLSAy~Ls~-------------d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~ 68 (297)
+.|..|||||||||+|||||+||.|.. |..||.+|++||++|||||+|.+|+|+++||++-|...+.
T Consensus 94 dnd~vvsvfetnirvlggli~~h~la~llk~e~~e~lq~y~dellkmakelg~kllpafnttsglp~~rinlk~gi~~pe 173 (587)
T KOG2430|consen 94 DNDHVVSVFETNIRVLGGLIGAHSLAELLKEEKGERLQTYDDELLKMAKELGNKLLPAFNTTSGLPFPRINLKFGIQDPE 173 (587)
T ss_pred CCCeEEEEeecccHhhhccchHHHHHHHHHHhccchhhhhhHHHHHHHHHHhhhhccccccCCCCCCcccchhccccChh
Confidence 457889999999999999999999862 4579999999999999999999999999999999876532
Q ss_pred Cc-CCCCcceecccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcC-CCCCCCCccccCCCCccccceeeecCCchhH
Q psy7224 69 AW-ASGSASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIE-KPNGLYPNYLNPKTGHWGQSHISMGALGDSF 146 (297)
Q Consensus 69 ~~-~~~~~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~-~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~ 146 (297)
.. .....+|.|.+||++|||..||++||+|.|.++|++++++||+.+ +...|++..+|..+|.|+....++||+.|||
T Consensus 174 a~~~~e~dtctac~gtlilefaals~~tg~~ifee~arkaldflwekr~rss~l~g~~inihsgdw~rkdsgigagidsy 253 (587)
T KOG2430|consen 174 AHLGREKDTCTACAGTLILEFAALSRFTGAPIFEEKARKALDFLWEKRHRSSDLMGTTINIHSGDWTRKDSGIGAGIDSY 253 (587)
T ss_pred hhhcccccchhhccchhhhhHHHHhhccCChhhHHHHHHHHHHHHHHhcccccccceeEEeccCcceecccCcCcchHHH
Confidence 21 123578999999999999999999999999999999999999864 6789999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCC----------------CCcccc-------------------ccchh-----------hhh---
Q psy7224 147 YEYLLKAWIQSNKEDTE----------------GPESFK-------------------FTDTL-----------EAK--- 177 (297)
Q Consensus 147 yEYLlK~~~l~g~~~~~----------------~PE~~~-------------------~~~~~-----------~~~--- 177 (297)
||||+|.|+|.|+.+.. +|--.. |-++. |..
T Consensus 254 yey~lkayillgddsfldrfn~hydai~ryi~k~pi~ldvhihkp~l~ar~~mdallaf~pglqvlkgdik~aie~heml 333 (587)
T KOG2430|consen 254 YEYLLKAYILLGDDSFLDRFNKHYDAIKRYINKGPIFLDVHIHKPMLAARGFMDALLAFFPGLQVLKGDIKEAIEMHEML 333 (587)
T ss_pred HHHHHHHhheeccHHHHHHHHHHHHHHHHHhcCCCeEEEEecccchhhHhhHHHHHHHhCcchhhhccccHHHHHHHHHH
Confidence 99999999999987642 222111 10110 000
Q ss_pred ----------------hhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccCCCC
Q psy7224 178 ----------------AYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSR 241 (297)
Q Consensus 178 ----------------~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~ 241 (297)
.....-+..++|||.+||.|+|||+||||.|.+.|.++.+.++++.+.+||||...|+.. .++
T Consensus 334 ~qvikkh~flpeaft~df~vhwaehpirpefaestyflykat~dp~yl~v~k~iidninkyakvpcgfaalkdirt-~~~ 412 (587)
T KOG2430|consen 334 FQVIKKHKFLPEAFTHDFQVHWAEHPIRPEFAESTYFLYKATGDPHYLEVAKQIIDNINKYAKVPCGFAALKDIRT-GSH 412 (587)
T ss_pred HHHHHHcccChHhhcccceeecccCCCChhhhhhheeeecccCCchHHHHHHHHHHHHhhheeCCchHHHHHHHhh-cch
Confidence 001112345899999999999999999999999999999999999999999999999987 467
Q ss_pred CCCCCCCCCCCcchhhHHhhhhHHHHhcCccc--cccccccccccc
Q psy7224 242 RGHSGSIFGSAELGMTIIDGLDTLYIMGLTDE--YEDGKKWVAESL 285 (297)
Q Consensus 242 ~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e--~~~~~~~V~nt~ 285 (297)
.|.|+||| |+|++|||||+|.++| ..+.++|||+|.
T Consensus 413 ed~mdsf~--------lae~fkylylifad~ediifd~d~yi~tte 450 (587)
T KOG2430|consen 413 EDQMDSFF--------LAEMFKYLYLIFADKEDIIFDIDDYIFTTE 450 (587)
T ss_pred HHHHHHHH--------HHHHHHHHHheecCHHHceechhHheEeec
Confidence 79999999 9999999999999877 568899999875
No 7
>KOG2204|consensus
Probab=99.60 E-value=4.2e-16 Score=152.34 Aligned_cols=91 Identities=52% Similarity=0.925 Sum_probs=87.0
Q ss_pred CCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccccccccccc
Q psy7224 206 PKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESL 285 (297)
Q Consensus 206 ~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~ 285 (297)
.+||+++.+|++||+|+|..|..|||+.||+.|.+++++.++.||.+..|+|++|+|||||+|++.++|.++++||.+.+
T Consensus 170 ~~~~~rrekVkemm~hAw~~Yk~yawg~neLrp~sk~g~s~~ifG~~~~GATIvDslDTlyim~l~~e~qEar~wi~~~~ 249 (625)
T KOG2204|consen 170 NKYRERREKVKEMMKHAWNNYKKYAWGKNELRPSSKQGHSSSIFGAHLKGATIVDSLDTLYIMGLKEEFQEARDWIAYNL 249 (625)
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhhcccccccCccccCCccccccccCcCCchHHHhhhHHHHHHHHHHHHHHHHHHHhhc
Confidence 57899999999999999999999999999999999998888889777899999999999999999999999999999999
Q ss_pred ccC-CCCccccc
Q psy7224 286 TLD-DKTHKVVM 296 (297)
Q Consensus 286 ~f~-~~~~~~~~ 296 (297)
+|+ ++...|||
T Consensus 250 ~~~~v~~~~SvF 261 (625)
T KOG2204|consen 250 DFKTVPIELSVF 261 (625)
T ss_pred ccccccchhhee
Confidence 999 89999998
No 8
>KOG2431|consensus
Probab=99.52 E-value=2.7e-15 Score=142.69 Aligned_cols=85 Identities=40% Similarity=0.760 Sum_probs=78.8
Q ss_pred CchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcccccccccccccccc
Q psy7224 207 KYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLT 286 (297)
Q Consensus 207 ~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~ 286 (297)
.+.++...|.+||.|+|++|.+|||++|+++|.|+... .+| +.|+|++|+|||++||++++|+.++.+||.++++
T Consensus 90 g~nerq~avv~aF~haW~gYkKyawGhD~l~Pvs~~~~--d~f---glGltiVDslDT~~iMgle~e~~ea~~Wv~~~L~ 164 (546)
T KOG2431|consen 90 GLNERQKAVVDAFLHAWSGYKKYAWGHDELKPVSQSFS--DWF---GLGLTIVDSLDTAMIMGLEDEFEEAREWVEKKLH 164 (546)
T ss_pred chhHHHHHHHHHHHHHHhhhhhhcccccccccchhccc--ccc---cccceEEechhHHHHhhhHHHHHHHHHHHHhhcc
Confidence 57888899999999999999999999999999987643 234 7999999999999999999999999999999999
Q ss_pred cCCCCccccc
Q psy7224 287 LDDKTHKVVM 296 (297)
Q Consensus 287 f~~~~~~~~~ 296 (297)
|+.|..|+||
T Consensus 165 f~~~~~VNlF 174 (546)
T KOG2431|consen 165 FEKDRDVNLF 174 (546)
T ss_pred cccccceehh
Confidence 9999999998
No 9
>PTZ00470 glycoside hydrolase family 47 protein; Provisional
Probab=99.52 E-value=4.6e-15 Score=147.97 Aligned_cols=83 Identities=47% Similarity=0.836 Sum_probs=76.0
Q ss_pred hhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccccccccccccc-
Q psy7224 209 REWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLTL- 287 (297)
Q Consensus 209 re~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~f- 287 (297)
.+++.+|+++|.++|++|..|||++|++.|.|+++. .+ ++||+||||+|||||||++.+||.++++||.++++|
T Consensus 70 ~~r~~~Vk~~F~haW~~Y~~~Awg~DEL~P~S~~~~--~~---~g~g~TlVDSLDTL~IMgl~~Ef~~a~~~V~~~l~f~ 144 (522)
T PTZ00470 70 IKRRESVREAMKHAWEGYKEYAWGHDELRPLTKRHH--EW---FGLGLTIIDSLDTLKIMGLKKEYKEGRDWVANNLKQS 144 (522)
T ss_pred HHHHHHHHHHHHHHHHHHHHhCcCccceecCcCCcc--CC---CcchhHHHHHHHHHHHcCChHHHHHHHHHHHhhCCCC
Confidence 468889999999999999999999999999998753 23 379999999999999999999999999999999999
Q ss_pred -CCCCccccc
Q psy7224 288 -DDKTHKVVM 296 (297)
Q Consensus 288 -~~~~~~~~~ 296 (297)
+.+..||||
T Consensus 145 ~~~~~~vsvF 154 (522)
T PTZ00470 145 KDTGLGVSVF 154 (522)
T ss_pred CCCCCeeeee
Confidence 778999998
No 10
>KOG2429|consensus
Probab=99.31 E-value=8.3e-13 Score=129.45 Aligned_cols=88 Identities=31% Similarity=0.502 Sum_probs=77.8
Q ss_pred hhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCC-CCCCcchhhHHhhhhHHHHhcCccccccccccccccccc
Q psy7224 209 REWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSI-FGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLTL 287 (297)
Q Consensus 209 re~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf-~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~f 287 (297)
.+.+.++++||.|+|.+|+.||.+.|+++|.+|.++.+.- -..|+..+||+|+||||.+|++.++|.++++||.++++|
T Consensus 31 ~~~Re~vr~MFyhayDnYm~hAFP~DEL~PltC~g~~~~~~D~~G~ysLtLIDaLdTLailGn~~eF~raV~lv~~~~~F 110 (622)
T KOG2429|consen 31 KQYREEVREMFYHAYDNYMEHAFPYDELKPLTCVGRGPGVNDTLGSYSLTLIDALDTLAILGNRTEFQRAVRLVIETVSF 110 (622)
T ss_pred HHHHHHHHHHHHHhhhhHhhccCCccccCcceecCCCCCccccccccchhhHHHhhHHHHhCChHHHHHHHHHHHhhCCc
Confidence 5667789999999999999999999999999998632210 023678899999999999999999999999999999999
Q ss_pred CCCCccccc
Q psy7224 288 DDKTHKVVM 296 (297)
Q Consensus 288 ~~~~~~~~~ 296 (297)
|+|++||||
T Consensus 111 d~d~~VqVF 119 (622)
T KOG2429|consen 111 DIDSTVQVF 119 (622)
T ss_pred ccCCeeEEE
Confidence 999999999
No 11
>PF01532 Glyco_hydro_47: Glycosyl hydrolase family 47; InterPro: IPR001382 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 47 GH47 from CAZY comprises enzymes with only one known activity; alpha-mannosidase (3.2.1.113 from EC). Alpha-mannosidase is involved in the maturation of Asn-linked oligo-saccharides []. The enzyme hydrolyses terminal 1,2-linked alpha-D-mannose residues in the oligo-mannose oligosaccharide man(9)(glcnac)(2) in a calcium-dependent manner. The mannose residues are trimmed away to produce, first, man(8)glcnac(2), then a man(5)(glcnac)(2) structure.; GO: 0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity, 0005509 calcium ion binding, 0016020 membrane; PDB: 2RI9_A 2RI8_B 1KRE_B 1KKT_A 1KRF_A 1NXC_A 1G6I_A 1DL2_A 1HCU_A 1FO2_A ....
Probab=99.24 E-value=1e-12 Score=129.95 Aligned_cols=75 Identities=48% Similarity=0.995 Sum_probs=65.2
Q ss_pred HHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcccccccccccccccccCCCC-ccccc
Q psy7224 218 MMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLTLDDKT-HKVVM 296 (297)
Q Consensus 218 a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~f~~~~-~~~~~ 296 (297)
||.++|+.|..|||++|++.|.++++.. + + ++||+||+|+|||||||++.+||.++++||.++++|+.+. .|+||
T Consensus 1 ~f~~a~~~Y~~~A~g~Del~P~s~~~~~-~-~--~g~~~TlvDSLdTL~imgl~~ef~~a~~~v~~~~~f~~~~~~vs~f 76 (452)
T PF01532_consen 1 MFRHAWNGYKKYAWGHDELRPLSGSGSD-S-F--GGWGATLVDSLDTLYIMGLKDEFNEAVDWVSNNLDFDQDDSTVSVF 76 (452)
T ss_dssp HHHHHHHHHHHHTTTSSEEETTTTEEE--S-S--TTS-HHHHHHHHHHHHHTHHHHHHHHHHHHHHC--TTSSSSEEEHH
T ss_pred ChhHHHHHHHHhcCCccccccccCCCCC-c-c--ccccceeeeeccceeecCCHHHHHHHHHHHHhhcCcCccceeechH
Confidence 7899999999999999999999987542 1 3 6899999999999999999999999999999999999988 78987
No 12
>KOG2430|consensus
Probab=98.58 E-value=1.3e-08 Score=95.67 Aligned_cols=88 Identities=32% Similarity=0.553 Sum_probs=77.4
Q ss_pred hhhhHHHHHHHHHhhccccccccccccccCCCCCCC---CCCCCCC-----CcchhhHHhhhhHHHHhcCcccccccccc
Q psy7224 209 REWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGH---SGSIFGS-----AELGMTIIDGLDTLYIMGLTDEYEDGKKW 280 (297)
Q Consensus 209 re~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~---~~Sf~~~-----~~~~~tl~eTLkyLyLmf~~~e~~~~~~~ 280 (297)
++.+.++.++|.|++..|+.||.+.|++.|.+|+++ ++.-.++ |.+++||+|+||||.+|..-+||.++.+-
T Consensus 7 kkl~~e~~dmf~h~y~nyme~a~padelmplsckgrirg~~psrgdvddalgkfsltlidsldtlvvln~~~efe~ai~~ 86 (587)
T KOG2430|consen 7 KKLGKEALDMFDHAYGNYMEHAFPADELMPLSCKGRIRGQEPSRGDVDDALGKFSLTLIDSLDTLVVLNELDEFEDAIDK 86 (587)
T ss_pred HHHHHHHHHHHHHhhhhhhhccCchhhcccccccceecCcCCCCCchhhhhcceeeeeeccccceeeccchHHHHHHHHH
Confidence 456789999999999999999999999999999743 2222232 46789999999999999999999999999
Q ss_pred cccccccCCCCccccc
Q psy7224 281 VAESLTLDDKTHKVVM 296 (297)
Q Consensus 281 V~nt~~f~~~~~~~~~ 296 (297)
|...++||.|..||||
T Consensus 87 vik~v~~dnd~vvsvf 102 (587)
T KOG2430|consen 87 VIKDVNFDNDHVVSVF 102 (587)
T ss_pred HHHhccCCCCeEEEEe
Confidence 9999999999999998
No 13
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=97.93 E-value=5.7e-05 Score=72.32 Aligned_cols=213 Identities=16% Similarity=0.084 Sum_probs=121.3
Q ss_pred cchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehh
Q psy7224 10 FETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFV 89 (297)
Q Consensus 10 FEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~ 89 (297)
.+.-.++|=||+.+|..++|+..|+.|+++.+.|..-|-.+.|.-+...+.. +.+ .++ . ..-..++++ +.
T Consensus 114 l~~~a~~l~ala~~~~at~d~~~l~~A~~~~~~l~~~~~~~~g~~~~~~~~~-~~~-~~~-~-~~~~h~~~a------ll 183 (384)
T cd00249 114 LYSHAFALLAAAQAAKVGGDPEARALAEETIDLLERRFWEDHPGAFDEADPG-TPP-YRG-S-NPHMHLLEA------ML 183 (384)
T ss_pred hHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCcccCCCCCC-CCC-CCC-C-ChhHHHHHH------HH
Confidence 4556789999999999999999999999999999987742233213222211 111 011 0 011112332 66
Q ss_pred hhHhhhCChhhHHHHHHHHHHHHhc--CCCCCCCCccccCCCC---ccccceeeecCCchhHHHHHHHHHHhhCCCCCC-
Q psy7224 90 YLSDVTGNPIYREKVEKIRSVISSI--EKPNGLYPNYLNPKTG---HWGQSHISMGALGDSFYEYLLKAWIQSNKEDTE- 163 (297)
Q Consensus 90 ~LS~lTgd~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~~~g---~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~- 163 (297)
.|.++|||++|.+.|.++.+.+... ....|.++...+..-. ......+..|..... ---|+..+.++|+....
T Consensus 184 ~l~~~tgd~~~~~~A~~l~~~~~~~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~Pgh~~e~-a~~ll~l~~~~~~~~~~~ 262 (384)
T cd00249 184 AAYEATGEQKYLDRADEIADLILDRFIDAESGVVREHFDEDWNPYNGDKGRHQEPGHQFEW-AWLLLRIASRSGQAWLIE 262 (384)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHHhcCcccCeEEEEECCCCCCCcCcCCCcCCCchHHHH-HHHHHHHHhhcCCHHHHH
Confidence 7889999999999999998877653 2334555444432100 001111222333322 22445666666543321
Q ss_pred --------------CCc---ccc-ccchhhhhhhcccccccCCC--hhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhh
Q psy7224 164 --------------GPE---SFK-FTDTLEAKAYRSQDKYYILR--PEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAW 223 (297)
Q Consensus 164 --------------~PE---~~~-~~~~~~~~~~~~~~~~y~lR--PE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~ 223 (297)
-|| .+. +..... . ...+ .-..- .|.+..+..+|++|||++|.+++.++.+.+..+.
T Consensus 263 ~a~~~~~~~~~~~~d~~~G~~~~~~~~~~~-~--~~~~-~~~~w~~~E~~~a~~~l~~~tgd~~~~~~~~~~~~~~~~~~ 338 (384)
T cd00249 263 KARRLFDLALALGWDPERGGLYYSFLDDGG-L--LEDD-DKRWWPQTEALKAALALAGITGDERYWQWYQRAWAYLWRHF 338 (384)
T ss_pred HHHHHHHHHHHhCcCccCCCEEEeeECCCC-C--cccc-cccccHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhc
Confidence 122 111 111000 0 0111 11222 3777888899999999999999999988887766
Q ss_pred ccccccccccccccC
Q psy7224 224 DNYVTYAWGKNELKP 238 (297)
Q Consensus 224 ~~y~gya~~~Dv~~p 238 (297)
.... +....+.+.+
T Consensus 339 ~d~~-~G~w~~~~~~ 352 (384)
T cd00249 339 IDPE-YGLWFGYLDA 352 (384)
T ss_pred CCCC-CCcceeeECC
Confidence 5444 4555555543
No 14
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=97.67 E-value=1.8e-05 Score=76.60 Aligned_cols=186 Identities=18% Similarity=0.213 Sum_probs=101.3
Q ss_pred hhhhhhccCCCc-----hHHHHHHHHHHHHhcccCCCC---CCcccceeecCCCCCCCCcCCCCcceecccccceeehhh
Q psy7224 19 AILTLYSFTGDP-----MYRDKAVHIADKMLPAFKTPT---GIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVY 90 (297)
Q Consensus 19 GLLSAy~Ls~d~-----~lL~kA~~lad~Ll~AF~tp~---giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~ 90 (297)
++|.||++++++ .+|++|+++.+.+...||+.. ||++.......+. . ...+ ++- |...+=..+
T Consensus 96 a~l~aye~t~~~~~~~~~yL~~A~~i~~~~~~~wd~~~cgGGi~W~~~~~~~~~--~-----~Kna-~sN-~~~~~laar 166 (370)
T PF03663_consen 96 ALLRAYELTGDQPSDNPKYLDLAKEIFDFLISGWDDTSCGGGIWWSIDDTNSGY--D-----YKNA-ISN-GPAAQLAAR 166 (370)
T ss_dssp HHHHHHHHH--H-----HHHHHHHHHHHHHHHTB-SGG-GS-BEEET----TEE--E-----EEEH-HHH-HHHHHHHHH
T ss_pred HHHHHHHhhCCCcchHHHHHHHHHHHHHHHHHhcCCccCCCCccccccccCCCC--C-----cccc-cch-HHHHHHHHH
Confidence 579999999999 999999999999999999763 6776532211111 0 0101 110 112223458
Q ss_pred hHhhhCChhhHHHHHHHHHHHHh--cC-CCCCCCCccccCCC-CccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCc
Q psy7224 91 LSDVTGNPIYREKVEKIRSVISS--IE-KPNGLYPNYLNPKT-GHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPE 166 (297)
Q Consensus 91 LS~lTgd~~y~~~a~~~~~~l~~--~~-~~~gL~p~~i~~~~-g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE 166 (297)
|.++|||.+|.+.|+++++-+.. +. ...|++-..++..+ |.-. ...
T Consensus 167 L~~~t~~~~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~------------------------------~~~ 216 (370)
T PF03663_consen 167 LYRITGDQTYLDWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNI------------------------------NKT 216 (370)
T ss_dssp HHHHH--HHHHHHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B-------------------------------TT-
T ss_pred HHHhcCChHHHHHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcC------------------------------CCc
Confidence 99999999999999999998876 22 33455555554332 1100 001
Q ss_pred cccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCC-CchhhhHHHHHHHHHhhccccccccccccccCCCC----
Q psy7224 167 SFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDP-KYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSR---- 241 (297)
Q Consensus 167 ~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~-~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~---- 241 (297)
.+.+..+ =+|..+-+||++|+++ .|.+.|.++.++...++-.... .++....|
T Consensus 217 ~~TYNqG-----------------~~l~a~~~Ly~~T~~~~~yl~~A~~la~~~~~~~~~~~~-----gil~e~~ce~~~ 274 (370)
T PF03663_consen 217 KWTYNQG-----------------VFLGAAAYLYNATNDEQTYLDRAEKLADAAINHFFDNGD-----GILTEEACEPSG 274 (370)
T ss_dssp --HHHHH-----------------HHHHHHHHHHHHH--H-HHHHHHHHHHHHHHHHHEETT-------EE---------
T ss_pred eechHHH-----------------HHHHHHHHHHHhcCCccHHHHHHHHHHHHHHHHhCCCCC-----eeeeccccccCc
Confidence 1111111 1578888999999877 9999999999998776332221 23322211
Q ss_pred -CCCCCCCCCCCcchhhHHhhhhHHHHhcC
Q psy7224 242 -RGHSGSIFGSAELGMTIIDGLDTLYIMGL 270 (297)
Q Consensus 242 -~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~ 270 (297)
.+.+...| --.++..|-.++.+..
T Consensus 275 ~~~~d~~~F-----kgi~~r~L~~l~~~~~ 299 (370)
T PF03663_consen 275 TCDGDQPLF-----KGIFARYLADLAQVAP 299 (370)
T ss_dssp -SSSGGGGH-----HHHHHHHHHHHHHHHT
T ss_pred CcCCccHHH-----HHHHHHHHHHHHHHCc
Confidence 12222223 2347778877777773
No 15
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=97.53 E-value=0.00015 Score=74.27 Aligned_cols=105 Identities=23% Similarity=0.205 Sum_probs=75.4
Q ss_pred CccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceee
Q psy7224 8 SVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLE 87 (297)
Q Consensus 8 svFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LE 87 (297)
-.-|--...+.|||+.|+.++|..+|++|++|++.++..|-.+.|=-+..-.........+.- .....+.+.-+....-
T Consensus 465 g~leDYA~~i~gll~lye~t~d~~yL~~A~~L~~~~i~~f~d~~gGf~~t~~~~~~l~ir~~~-~~D~a~~S~na~~~~~ 543 (667)
T COG1331 465 GLLEDYAFLILGLLALYEATGDLAYLEKAIELADEAIADFWDDEGGFYDTPSDSEDLLIRPKE-PTDGATPSGNAVAAQA 543 (667)
T ss_pred ccchhHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhcCCCCCcccCCCcccccccCCCC-CCCCCCCCHHHHHHHH
Confidence 345666788999999999999999999999999999988877762233222222222111110 0223345555677788
Q ss_pred hhhhHhhhCChhhHHHHHHHHHHHHh
Q psy7224 88 FVYLSDVTGNPIYREKVEKIRSVISS 113 (297)
Q Consensus 88 f~~LS~lTgd~~y~~~a~~~~~~l~~ 113 (297)
+.+||++|||.+|.++|.++.+.+..
T Consensus 544 L~~Ls~ltg~~~y~e~A~~~L~a~~~ 569 (667)
T COG1331 544 LLRLSLLTGDARYLEAAEDILQAFAG 569 (667)
T ss_pred HHHHHhhcCchhHHHHHHHHHHHHHH
Confidence 99999999999999999999887764
No 16
>cd00249 AGE AGE domain; N-acyl-D-glucosamine 2-epimerase domain; Responsible for intermediate epimerization during biosynthesis of N-acetylneuraminic acid. Catalytic mechanism is believed to be via nucleotide elimination and readdition and is ATP modulated. AGE is structurally and mechanistically distinct from the other four types of epimerases. The AGE domain monomer is composed of an alpha(6)/alpha(6)-barrel, the structure of which is also found in glucoamylase and cellulase. The active form is a homodimer. The alignment also contains subtype III mannose 6-phosphate isomerases.
Probab=97.28 E-value=0.0054 Score=58.70 Aligned_cols=199 Identities=14% Similarity=0.004 Sum_probs=114.6
Q ss_pred hhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCC-CCcccceeecCCCCCCCCcCCCCcceecccccceeehhhh
Q psy7224 13 TIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPT-GIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYL 91 (297)
Q Consensus 13 tIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~-giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~L 91 (297)
.-|.|-+|-.||.+++++..|+.|+...+.|..-+-.+. |-=+..++ ..|.+... + ..+=+.+-+..=+..+
T Consensus 55 ~ar~i~~~a~a~~~~~~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~~-~~g~~~~~-----~-~~l~~~a~~l~ala~~ 127 (384)
T cd00249 55 QARQVYCFAVAYLLGWRPEWLEAAEHGLEYLDRHGRDPDHGGWYFALD-QDGRPVDA-----T-KDLYSHAFALLAAAQA 127 (384)
T ss_pred ecHHHHHHHHHHHhcCChhHHHHHHHHHHHHHHhCcCCCCCCEEEEEc-CCCCCccc-----c-cchHHHHHHHHHHHHH
Confidence 468899999999999999999999999999998665443 43233332 13333211 1 1122333344556779
Q ss_pred HhhhCChhhHHHHHHHHHHHHhcC-CCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCC-------
Q psy7224 92 SDVTGNPIYREKVEKIRSVISSIE-KPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTE------- 163 (297)
Q Consensus 92 S~lTgd~~y~~~a~~~~~~l~~~~-~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~------- 163 (297)
.+.||||.|.+.|.++.+.+.+.- ...|.+-...++.. .. .-+ +..-....|-|+..+..+|+....
T Consensus 128 ~~at~d~~~l~~A~~~~~~l~~~~~~~~g~~~~~~~~~~---~~-~~~-~~~~~h~~~all~l~~~tgd~~~~~~A~~l~ 202 (384)
T cd00249 128 AKVGGDPEARALAEETIDLLERRFWEDHPGAFDEADPGT---PP-YRG-SNPHMHLLEAMLAAYEATGEQKYLDRADEIA 202 (384)
T ss_pred HHhcCCHHHHHHHHHHHHHHHHHhccCCCcccCCCCCCC---CC-CCC-CChhHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 999999999999999999887643 23343332333321 10 001 111112257778888777765432
Q ss_pred --------CCccccc-cchhhhhhhcccccccCCCh----hhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhh
Q psy7224 164 --------GPESFKF-TDTLEAKAYRSQDKYYILRP----EVIESYFYLWRVTKDPKYREWGWDYVQMMKHAW 223 (297)
Q Consensus 164 --------~PE~~~~-~~~~~~~~~~~~~~~y~lRP----E~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~ 223 (297)
.++.-.+ ....+.......+.....-| |.+-.+.-++++|+|+.|.+++.++++.+.++.
T Consensus 203 ~~~~~~~~~~~~G~~~e~~~~~~~~~~~~~~~~~~Pgh~~e~a~~ll~l~~~~~~~~~~~~a~~~~~~~~~~~ 275 (384)
T cd00249 203 DLILDRFIDAESGVVREHFDEDWNPYNGDKGRHQEPGHQFEWAWLLLRIASRSGQAWLIEKARRLFDLALALG 275 (384)
T ss_pred HHHHHHhcCcccCeEEEEECCCCCCCcCcCCCcCCCchHHHHHHHHHHHHhhcCCHHHHHHHHHHHHHHHHhC
Confidence 1111000 00000000001111111224 555555567899999999999999999877654
No 17
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=96.88 E-value=0.0034 Score=63.49 Aligned_cols=79 Identities=20% Similarity=0.253 Sum_probs=56.7
Q ss_pred hhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHh
Q psy7224 14 IRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSD 93 (297)
Q Consensus 14 IR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~ 93 (297)
-.+|-||+++|+++|++.+|+-|+.+||.+....+....-|.. .....|.|.+.+-+..|=+
T Consensus 128 ~~ll~gl~~~y~~tG~~~~L~v~~k~ad~~~~~~~~~~~~~~~------------------~~~~~~~~~i~~~l~~LY~ 189 (520)
T PF07944_consen 128 GKLLEGLIDYYEATGNERALDVATKLADWVYRRLSRLGPEPGQ------------------KMGYPEHGGINEALVRLYE 189 (520)
T ss_pred hHHHHHHHHHHHHHCcHHHHHHHHHHHHHHHHHhccCCHHHhh------------------cccccccchHHHHHHHHHH
Confidence 4678899999999999999999999999994433321111110 0001244455567888999
Q ss_pred hhCChhhHHHHHHHHHH
Q psy7224 94 VTGNPIYREKVEKIRSV 110 (297)
Q Consensus 94 lTgd~~y~~~a~~~~~~ 110 (297)
+|||++|.+.|++..+.
T Consensus 190 ~Tgd~~yL~lA~~f~~~ 206 (520)
T PF07944_consen 190 ITGDERYLDLAEYFVDQ 206 (520)
T ss_pred HhCCHHHHHHHHHHHHH
Confidence 99999999999988763
No 18
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=96.73 E-value=0.0021 Score=60.99 Aligned_cols=170 Identities=19% Similarity=0.264 Sum_probs=96.1
Q ss_pred hhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 16 FIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 16 ~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
++.||+.+|+.++|+.+++.|++.++.++........+ . -..+|-+. ..|-+.|
T Consensus 30 ~~~gl~~~~~~tgd~~~~~~a~~~~~~~~~~~~~~~~~--------------------d---~~~~g~~~---~~~y~~t 83 (336)
T PF07470_consen 30 FWYGLLEAYEYTGDERYLDYAERWADRFIEEDGSDYNL--------------------D---DHDIGFLL---LDLYERT 83 (336)
T ss_dssp HHHHHHHHHHHH--HHHHHHHHHHHHHHHHHHHTTTSC--------------------C---GTTHHHHH---HHHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccCCccCC--------------------c---hhhhHHHH---HHHHHHh
Confidence 67889999999999999999999999988755431000 0 01223222 3388999
Q ss_pred CChhhHHHHHHHHH-HHHhcCC-CCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccch
Q psy7224 96 GNPIYREKVEKIRS-VISSIEK-PNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDT 173 (297)
Q Consensus 96 gd~~y~~~a~~~~~-~l~~~~~-~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~ 173 (297)
||++|.+.+.++.+ .|.+... ..|-+.. +... |... +
T Consensus 84 ~d~~y~~~~~~~a~~~l~~~~~~~~G~~~~--~~~~-----------------------------------~~~~-w--- 122 (336)
T PF07470_consen 84 GDEKYKDAAIQAADWLLARRPRTSDGGFWH--NRPY-----------------------------------PNQV-W--- 122 (336)
T ss_dssp -THHHHHHHHHHHHHHHHTSCBECTGCBEC--TTTS-----------------------------------TTEE-E---
T ss_pred CCHHHHHHHHHHHHHHHHhCCCCCCCcccc--CCCC-----------------------------------CCce-e---
Confidence 99999999999999 6665443 2332211 0000 0000 0
Q ss_pred hhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCC-CC
Q psy7224 174 LEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFG-SA 252 (297)
Q Consensus 174 ~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~-~~ 252 (297)
.|.-|. ..+.++.+.+.|||++|.+.|.+-+..+.+.......-...++..... ..+...++|+ ++
T Consensus 123 --------iD~~~M----~~p~l~~~~~~tgd~~~~~~a~~q~~~~~~~~~d~~tGl~~h~~~~~~-~~~~s~~~WsRG~ 189 (336)
T PF07470_consen 123 --------IDGMYM----NLPFLAWAGKLTGDPKYLDEAVRQFRLTRKYLYDPETGLYYHGYTYQG-YADWSDSFWSRGN 189 (336)
T ss_dssp --------TTHHHH----HHHHHHHHHHHHTGHHHHHHHHHHHHHHHHHHB-TTTSSBESEEETTS-SSTTST--BHHHH
T ss_pred --------eccccc----cHHHHHHHHHHHCCcHHHHHHHHHHHHHHHhccCCCCCceeeccCCCC-CcCcccccCcchh
Confidence 111111 345567778999999999988877777776655433222223322211 1111124564 23
Q ss_pred cchh-hHHhhhhHH
Q psy7224 253 ELGM-TIIDGLDTL 265 (297)
Q Consensus 253 ~~~~-tl~eTLkyL 265 (297)
+|++ -++++|.+|
T Consensus 190 gW~~~Gl~~~l~~l 203 (336)
T PF07470_consen 190 GWAIYGLAEVLEYL 203 (336)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHh
Confidence 5553 788888774
No 19
>PF07944 DUF1680: Putative glycosyl hydrolase of unknown function (DUF1680); InterPro: IPR012878 The members of this family are sequences derived from hypothetical bacterial and eukaryotic proteins of unknown function. One member of this family is annotated as a possible arabinosidase, but no references were found to back this.
Probab=95.86 E-value=0.023 Score=57.50 Aligned_cols=169 Identities=18% Similarity=0.312 Sum_probs=94.9
Q ss_pred HHHHhcccCCCCCCcccceeecCCC--CCCCCcCCCCcceecccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcCCC
Q psy7224 40 ADKMLPAFKTPTGIPHALINVYTGD--SKNYAWASGSASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEKP 117 (297)
Q Consensus 40 ad~Ll~AF~tp~giP~~~vn~~~g~--~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~ 117 (297)
-|+|+..|....|+|-.......-. .....|. =..+|-..==..++...|+|++..++++++.+.|.+.+..
T Consensus 25 ~d~ll~~~r~~agl~~~~~~~g~we~~~~~~~~~------~~~~g~wl~a~a~~~~~~~D~~l~~~~d~~V~~l~~~Q~~ 98 (520)
T PF07944_consen 25 PDRLLYNFRSHAGLPNFAIAYGGWEGEFPGWWFR------GHDVGKWLEAAAYAYAYTGDPELKAKADEIVDELAAAQQP 98 (520)
T ss_pred HHHHhhhcCcccCCCCccccCCCCccCCCCCccC------CCcHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHhccC
Confidence 4788888887777776654332111 1111111 1233433223456778999999999999999999888878
Q ss_pred CCCCCccccCC----CCcccc---ceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccchhhh--hhh---cccccc
Q psy7224 118 NGLYPNYLNPK----TGHWGQ---SHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDTLEA--KAY---RSQDKY 185 (297)
Q Consensus 118 ~gL~p~~i~~~----~g~~~~---~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~~~~--~~~---~~~~~~ 185 (297)
+|-+....+.. ...|.. ..+++|. .++=|+-.|..+|++.-. +=...+...... ... ..+...
T Consensus 99 dGYl~~~~~~~~~~~~~~w~~~~he~Y~~~~----ll~gl~~~y~~tG~~~~L-~v~~k~ad~~~~~~~~~~~~~~~~~~ 173 (520)
T PF07944_consen 99 DGYLGTYPEERNFNPDDRWAPDMHELYCLGK----LLEGLIDYYEATGNERAL-DVATKLADWVYRRLSRLGPEPGQKMG 173 (520)
T ss_pred CceecccccccccccccCCCCCccceehHhH----HHHHHHHHHHHHCcHHHH-HHHHHHHHHHHHHhccCCHHHhhccc
Confidence 88666655544 234554 1344431 223344455556654321 000000000000 000 011122
Q ss_pred cCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHH
Q psy7224 186 YILRPEVIESYFYLWRVTKDPKYREWGWDYVQMM 219 (297)
Q Consensus 186 y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~ 219 (297)
+.-.+|..|+++-||++|||++|.+.|..+.+..
T Consensus 174 ~~~~~~i~~~l~~LY~~Tgd~~yL~lA~~f~~~~ 207 (520)
T PF07944_consen 174 YPEHGGINEALVRLYEITGDERYLDLAEYFVDQR 207 (520)
T ss_pred ccccchHHHHHHHHHHHhCCHHHHHHHHHHHHHh
Confidence 3345677799999999999999999998776543
No 20
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=94.82 E-value=0.021 Score=54.22 Aligned_cols=174 Identities=18% Similarity=0.229 Sum_probs=101.5
Q ss_pred hhhhhhhhhhhccCCCchHHHHHHHHHHHHh-cccCCCCCCcccceee----cCCCCCCCCcCCCCcce---ecccccce
Q psy7224 14 IRFIGAILTLYSFTGDPMYRDKAVHIADKML-PAFKTPTGIPHALINV----YTGDSKNYAWASGSASI---LSELGTLH 85 (297)
Q Consensus 14 IR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll-~AF~tp~giP~~~vn~----~~g~~~~~~~~~~~~~~---lAe~gs~~ 85 (297)
.-.+-++|.+|++++|+.++++|.+|.+.++ .-++.++|...-.++. ..+........ +..++ .-|..-+.
T Consensus 142 mhl~eA~l~l~~~~~~~~~~~~a~~l~~~~~~~f~~~~~g~~~E~f~~dw~~~~~~~~~d~~~-~~~~~pGH~~E~~wll 220 (346)
T PF07221_consen 142 MHLLEAFLALYEATGDPRYLDRAEELLDLFLDRFADPESGALPEFFDRDWNPLPDGSGDDTFR-GRIVEPGHDFEWAWLL 220 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCHHCCTTEETSEEETTSEBETTTTTTHSTT-TSSB-HHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHHhccCeeeeeeccccccccccccccccc-cCccCCchhHHHHHHH
Confidence 4567788999999999999999999999999 4446666754443322 11110000000 00011 23555566
Q ss_pred eehhhhHhhhCChhhHHHHHHHHHHHHhc--CCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCC
Q psy7224 86 LEFVYLSDVTGNPIYREKVEKIRSVISSI--EKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTE 163 (297)
Q Consensus 86 LEf~~LS~lTgd~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~ 163 (297)
+|+. .....+++.+.+.|.++++..... ....|-+...+|.......
T Consensus 221 ~~~~-~~~~~~~~~~~~~a~~l~~~~~~~G~d~~~gG~~~~~d~~g~~~~------------------------------ 269 (346)
T PF07221_consen 221 LEAA-RLTGRGDPDWLERARRLFDFALEHGWDREGGGLFYSVDRDGKPPD------------------------------ 269 (346)
T ss_dssp HHHH-HHCHCT-HTHHHHHHHHHHHHHHHHBSTTTSSB-SEEETTS-BSS------------------------------
T ss_pred HHHH-HhcccccHHHHHHHHHHHHHHHHheEecCCCeEEEEEeCCCCccc------------------------------
Confidence 6655 335678889998888887765542 2233322234443321100
Q ss_pred CCccccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccC
Q psy7224 164 GPESFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKP 238 (297)
Q Consensus 164 ~PE~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p 238 (297)
.+.. .-.-.|.+-.+..+|+.|||+.|.+++.++.+.+.++..... +....+.+.+
T Consensus 270 -~~k~-----------------wW~q~Eal~a~~~~~~~tg~~~~~~~~~~~~~~~~~~~~d~~-~G~W~~~l~~ 325 (346)
T PF07221_consen 270 -RSKR-----------------WWPQAEALKALLAAYELTGDEKYLDWARRVWDYIFRHFIDPE-YGEWFDYLDR 325 (346)
T ss_dssp -T-EE-----------------HHHHHHHHHHHHHHHHHH--HHHHHHHHHHHHHHHHHTB-TT-TSSB-SEE-T
T ss_pred -cCcc-----------------ccHHHHHHHHHHHHHhccCcHHHHHHHHHHHHHHHHhCCCCC-CCeeEeeECC
Confidence 0111 111247788889999999999999999999999998886653 4445555543
No 21
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=94.80 E-value=0.16 Score=47.21 Aligned_cols=141 Identities=16% Similarity=0.081 Sum_probs=82.8
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCC
Q psy7224 19 AILTLYSFTGDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGN 97 (297)
Q Consensus 19 GLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd 97 (297)
+|+..|+. +|+.+++.|++++++|+..-. ...+..+ ..+.....++. ...+.+.+=+..|.+.|||
T Consensus 91 ~ll~l~~~-~~~~~l~~a~~~~~~l~~~~~~~~~~~~~-----~~~~~~~~G~~-------hG~aGi~~~L~~l~~~t~d 157 (321)
T cd04791 91 ALLYFART-GDPALLEAAAKIAELLAEALERGDPALLW-----PDFDRVDHGLL-------HGWAGIALFLLRLYKATGD 157 (321)
T ss_pred HHHHHHhc-CChHHHHHHHHHHHHHHHHhhcccccccc-----ccCCCCCCccc-------cCcHHHHHHHHHHHHHHCC
Confidence 45677888 999999999999999976432 2222111 11111112222 1222333446789999999
Q ss_pred hhhHHHHHHHHHHHHhcCC-CCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccchhhh
Q psy7224 98 PIYREKVEKIRSVISSIEK-PNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDTLEA 176 (297)
Q Consensus 98 ~~y~~~a~~~~~~l~~~~~-~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~~~~ 176 (297)
++|.+.|.++.+.+.+... ..+-+.. ... ... ....|-.
T Consensus 158 ~~~l~~A~~~~~~~~~~~~~~~~g~~~---~~~------------------------------~~~---~~~~wch---- 197 (321)
T cd04791 158 SRYLELAEEALDKELARAVVDDGGLLQ---VDE------------------------------GAR---LLPYLCS---- 197 (321)
T ss_pred HHHHHHHHHHHHHHHHhhccCCCCceE---cCC------------------------------CCc---cCcccCC----
Confidence 9999999999887765321 1111100 000 000 0001111
Q ss_pred hhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhh
Q psy7224 177 KAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAW 223 (297)
Q Consensus 177 ~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~ 223 (297)
--|=++-++.-++++|+|++|++.+.++.+.+...+
T Consensus 198 -----------G~aGi~~~l~~l~~~~~d~~~~~~a~~~~~~~~~~~ 233 (321)
T cd04791 198 -----------GSAGLGLLMLRLEAITGDKRWRDEADGIAHAALSSC 233 (321)
T ss_pred -----------CcHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHhhhh
Confidence 112355666778999999999999998888877654
No 22
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [].; GO: 0016837 carbon-oxygen lyase activity, acting on polysaccharides, 0045490 pectin catabolic process, 0005737 cytoplasm; PDB: 2V8J_A 2V8K_A 2V8I_A.
Probab=93.06 E-value=0.14 Score=51.06 Aligned_cols=94 Identities=21% Similarity=0.331 Sum_probs=51.3
Q ss_pred CCchHHHHHHHHHHHHhcccCCC----CCCcccceeecCCCCCCCCcCCCCcceecccccce---eehhhhHhhhCChhh
Q psy7224 28 GDPMYRDKAVHIADKMLPAFKTP----TGIPHALINVYTGDSKNYAWASGSASILSELGTLH---LEFVYLSDVTGNPIY 100 (297)
Q Consensus 28 ~d~~lL~kA~~lad~Ll~AF~tp----~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~---LEf~~LS~lTgd~~y 100 (297)
.+...|+--.+.+|.+|.....+ |.+-..-++..++++..+.+..+....++-+.|-| ==+..||.+||||+|
T Consensus 11 ~~~~~l~~v~~y~d~vl~~~~d~~~~~TPLlaDG~D~~t~~pV~W~~pDg~~~~iSNfAsQQN~lR~L~~LS~lTgd~~Y 90 (557)
T PF06917_consen 11 QDDERLSAVKQYADNVLQHARDPYENPTPLLADGIDPRTLKPVEWIFPDGRDAPISNFASQQNFLRTLVGLSNLTGDPKY 90 (557)
T ss_dssp ----HHHHHHHHHHHHHHHTB--STS--S-B-SEE-TTT--B-EEE-TTS-EEEEE-GGG-HHHHHHHHHHHHHH--THH
T ss_pred HHHHHHHHHHHHHHHHHHhccCCCCCCCCeeccccccCCCCceEEECCCCCccccccHHHHHHHHHHHHHHHhccCCHHH
Confidence 35678888888999988666543 34445677777777654333345556666666533 223449999999999
Q ss_pred HHHHHHHHHHHHh-cCCCCCCC
Q psy7224 101 REKVEKIRSVISS-IEKPNGLY 121 (297)
Q Consensus 101 ~~~a~~~~~~l~~-~~~~~gL~ 121 (297)
.+.|..+.+.+.. .....||+
T Consensus 91 ~q~A~~~~~yfldh~~D~~GL~ 112 (557)
T PF06917_consen 91 QQRAQEIIRYFLDHFVDDSGLF 112 (557)
T ss_dssp HHHHHHHHHHHHHHSB-TTS-B
T ss_pred HHHHHHHHHHHHHhccCCCcce
Confidence 9999998885544 34555875
No 23
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=92.97 E-value=0.17 Score=50.73 Aligned_cols=73 Identities=18% Similarity=0.248 Sum_probs=55.9
Q ss_pred hhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 16 FIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 16 ~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
.+-|++++|.+||.+.+|+-+..|||-+..-|+.-++ +.... .+=+-+-|.+..|-++|
T Consensus 136 Lieg~va~~qaTGkr~lldV~~rlADhi~tvfgp~~~-----------q~~g~----------~gH~eielAl~~Ly~~T 194 (589)
T COG3533 136 LIEGGVAAHQATGKRRLLDVVCRLADHIATVFGPEED-----------QVPGY----------CGHPEIELALAELYRLT 194 (589)
T ss_pred HHhhhhHHHHhhCcchHHHHHHHHHHhhhhhcCcccc-----------ccccc----------cCCCchhHHHHHHHHHh
Confidence 4568899999999999999999999999999984433 11111 12234455677899999
Q ss_pred CChhhHHHHHHHHH
Q psy7224 96 GNPIYREKVEKIRS 109 (297)
Q Consensus 96 gd~~y~~~a~~~~~ 109 (297)
|+++|.+.|.....
T Consensus 195 g~~rYL~LA~~Fi~ 208 (589)
T COG3533 195 GDQRYLDLARRFIH 208 (589)
T ss_pred cChHHHHHHHHHHH
Confidence 99999999987544
No 24
>cd04791 LanC_SerThrkinase Lanthionine synthetase C-like domain associated with serine threonine kinases. Some members of this subgroup lack the zinc binding site and the active site residues, and therefore are most likely inactive. The function of this domain is unknown.
Probab=91.92 E-value=0.31 Score=45.34 Aligned_cols=86 Identities=26% Similarity=0.274 Sum_probs=59.5
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccCC-CCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFKT-PTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~t-p~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
.=.|+..|..++|+.+++.|+++.+.+...|.. +.|.+. ...+......|. +| ...+.+=+.+|.++|
T Consensus 145 ~~~L~~l~~~t~d~~~l~~A~~~~~~~~~~~~~~~~g~~~----~~~~~~~~~~wc-hG------~aGi~~~l~~l~~~~ 213 (321)
T cd04791 145 ALFLLRLYKATGDSRYLELAEEALDKELARAVVDDGGLLQ----VDEGARLLPYLC-SG------SAGLGLLMLRLEAIT 213 (321)
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhccCCCCceE----cCCCCccCcccC-CC------cHHHHHHHHHHHHhc
Confidence 334788899999999999999999999888864 334322 111112223343 12 233445566789999
Q ss_pred CChhhHHHHHHHHHHHHh
Q psy7224 96 GNPIYREKVEKIRSVISS 113 (297)
Q Consensus 96 gd~~y~~~a~~~~~~l~~ 113 (297)
+|++|.+.++++.+.+.+
T Consensus 214 ~d~~~~~~a~~~~~~~~~ 231 (321)
T cd04791 214 GDKRWRDEADGIAHAALS 231 (321)
T ss_pred CCHHHHHHHHHHHHHHhh
Confidence 999999999998887764
No 25
>COG1331 Highly conserved protein containing a thioredoxin domain [Posttranslational modification, protein turnover, chaperones]
Probab=90.58 E-value=2 Score=44.69 Aligned_cols=164 Identities=22% Similarity=0.209 Sum_probs=103.9
Q ss_pred hhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 16 FIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 16 ~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
.+-+|+.|+-+.+|+.+++.|+.+++.++...... +++.... .|... ....+.+..=+.+=...|=++|
T Consensus 416 mi~aLa~a~~~~~d~~~l~~A~~~~~fi~~~l~~~-rl~~~~~---~G~a~-------~~g~leDYA~~i~gll~lye~t 484 (667)
T COG1331 416 MIAALAEAGRVLGDPEYLEAAERAADFILDNLYVD-RLLRRYR---GGEAA-------VAGLLEDYAFLILGLLALYEAT 484 (667)
T ss_pred HHHHHHHHHHHcCChHHHHHHHHHHHHHHHhhccc-chheeee---cCccc-------ccccchhHHHHHHHHHHHHHhh
Confidence 45678899999999999999999999999888766 6765432 22211 2234566666777788899999
Q ss_pred CChhhHHHHHHHHHHHHhc-CCC-CCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccch
Q psy7224 96 GNPIYREKVEKIRSVISSI-EKP-NGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDT 173 (297)
Q Consensus 96 gd~~y~~~a~~~~~~l~~~-~~~-~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~ 173 (297)
+|.+|.+.|.+..+.+... ... .|++ +..+ +| .-++..++.. .++
T Consensus 485 ~d~~yL~~A~~L~~~~i~~f~d~~gGf~----~t~~--------------~~-------~~l~ir~~~~--------~D~ 531 (667)
T COG1331 485 GDLAYLEKAIELADEAIADFWDDEGGFY----DTPS--------------DS-------EDLLIRPKEP--------TDG 531 (667)
T ss_pred CcHHHHHHHHHHHHHHHHHhcCCCCCcc----cCCC--------------cc-------cccccCCCCC--------CCC
Confidence 9999999999887755432 222 2321 1100 00 0011111100 000
Q ss_pred hhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcc-cccccccc
Q psy7224 174 LEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDN-YVTYAWGK 233 (297)
Q Consensus 174 ~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~-y~gya~~~ 233 (297)
. +.+ .|- -.+..+.=|-++|||..|.+.|+++.++|.-.+.. +.++++.-
T Consensus 532 a----~~S---~na---~~~~~L~~Ls~ltg~~~y~e~A~~~L~a~~~~~~~~p~~~~~~~ 582 (667)
T COG1331 532 A----TPS---GNA---VAAQALLRLSLLTGDARYLEAAEDILQAFAGLAERAPFAHAGLL 582 (667)
T ss_pred C----CCC---HHH---HHHHHHHHHHhhcCchhHHHHHHHHHHHHHHHHHhCCccchHHH
Confidence 0 000 011 14566777899999999999999999998876654 45665543
No 26
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein. This family contains the lanthionine synthetase C-like proteins 1 and 2 which are related to the bacterial lanthionine synthetase components C (LanC). LANCL1 and LANCL2 (testes-specific adriamycin sensitivity protein) are thought to be peptide-modifying enzyme components in eukaryotic cells. Both proteins are produced in large quantities in the brain and testes and may have role in the immune surveillance of these organs.
Probab=88.93 E-value=2.6 Score=40.05 Aligned_cols=183 Identities=17% Similarity=0.181 Sum_probs=96.6
Q ss_pred hhhhhhccCC-CchHHHHHHHHHHHHhcccC-CC----CCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhH
Q psy7224 19 AILTLYSFTG-DPMYRDKAVHIADKMLPAFK-TP----TGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLS 92 (297)
Q Consensus 19 GLLSAy~Ls~-d~~lL~kA~~lad~Ll~AF~-tp----~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS 92 (297)
.||..|..++ .+.+.+.+.++++.++.+=. .. .+.|. ..+.. +. ...+|. +| -+|... -+..+.
T Consensus 109 ~Ll~l~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~-~~~~~-~~-~~~G~a-HG-----~aGI~~-~L~~~~ 178 (343)
T cd04794 109 ALLFLNKKFGFKKIPSSLIKSICDAILESGRTGAAKYRAPCPL-MYEWH-GK-EYLGAA-HG-----LAGILY-ILLQTP 178 (343)
T ss_pred HHHHHHHHcCcCCCCHHHHHHHHHHHHHHHHHhhhccCCCCCc-ccccc-Cc-eecchh-hh-----HHHHHH-HHHhhh
Confidence 3666777776 34677888888888775411 11 11221 11111 11 012332 22 123332 266778
Q ss_pred hhhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccc
Q psy7224 93 DVTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTD 172 (297)
Q Consensus 93 ~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~ 172 (297)
+.++|+++.+.+.++.+.+.+.....|-||...+...... ....+=|+.|-- .-|++.+..+++... ..
T Consensus 179 ~~~~~~~~~~~i~~~i~~~~~~~~~~g~w~~~~~~~~~~~-~~~wChG~~Gi~--~~l~~~~~~~~~~~~--------~~ 247 (343)
T cd04794 179 LFLLKPSLAPLIKRSLDYLLSLQFPSGNFPSSLGNRKRDR-LVQWCHGAPGIV--YLLAKAYLVFKEEQY--------LE 247 (343)
T ss_pred hhcCCccHHHHHHHHHHHHHHhhccCCCCCCccCCCCCCc-cccccCCCchHH--HHHHHHHHHhCCHHH--------HH
Confidence 8899999999999999988776666687887665321100 011222444332 344455544443211 00
Q ss_pred hhhh---hhhcc----cc-cccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHh
Q psy7224 173 TLEA---KAYRS----QD-KYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHA 222 (297)
Q Consensus 173 ~~~~---~~~~~----~~-~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~ 222 (297)
..+. ...+. .+ .-..--+=..+.+-.+|+.|++++|.++|..+.+.+...
T Consensus 248 ~~~~~~~~~~~~g~~~~~~~lCHG~~G~~~~lL~~~~~~~~~~~~~~a~~~~~~~~~~ 305 (343)
T cd04794 248 AAIKCGELIWKRGLLKKGPGLCHGIAGNAYAFLLLYRLTGDLKYLYRACKFAEFLINY 305 (343)
T ss_pred HHHHHHHHHHHhCCccCCCccccCccchHHHHHHHHHHhCcHHHHHHHHHHHHHHhcc
Confidence 0000 00000 00 000001225678889999999999999999887776654
No 27
>COG2942 N-acyl-D-glucosamine 2-epimerase [Carbohydrate transport and metabolism]
Probab=86.28 E-value=3.6 Score=40.22 Aligned_cols=137 Identities=20% Similarity=0.250 Sum_probs=83.1
Q ss_pred hhhhhhhhhhccCCCchHHHHHHHHHHHHhccc-CCCCCC----cccceeecCCCC---CCCCcC-------------CC
Q psy7224 15 RFIGAILTLYSFTGDPMYRDKAVHIADKMLPAF-KTPTGI----PHALINVYTGDS---KNYAWA-------------SG 73 (297)
Q Consensus 15 R~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF-~tp~gi----P~~~vn~~~g~~---~~~~~~-------------~~ 73 (297)
-.+-.||++|+.++++..|++|.+||+.++.=| |..+|. +-..+|+.++-. .+|+.. .+
T Consensus 178 Hl~EA~LA~~e~~~~~~~~~~A~~ia~l~~~rf~d~~~g~v~E~fd~dW~p~~~frg~~~ePGH~fEW~~Lll~~a~~~~ 257 (388)
T COG2942 178 HLLEAMLAAYEATGEKTWLDRADRIADLIISRFADAESGLVREHFDHDWNPAHGFRGRGIEPGHQFEWAWLLLDIARRRG 257 (388)
T ss_pred HHHHHHHHHHhccCchhHHHHHHHHHHHHHHHhhhcccCcHhhhccccCCcCCCcccCCCCCchHHHHHHHHHHHHHHhc
Confidence 456679999999999999999999999998655 566664 334444444322 111100 00
Q ss_pred C----------------cceecccc----cceeehh-------------------hhHhhhC-ChhhHHHHHHHHHHHHh
Q psy7224 74 S----------------ASILSELG----TLHLEFV-------------------YLSDVTG-NPIYREKVEKIRSVISS 113 (297)
Q Consensus 74 ~----------------~~~lAe~g----s~~LEf~-------------------~LS~lTg-d~~y~~~a~~~~~~l~~ 113 (297)
. ...-.+-| |+..++. .|+..|| +.+|.+-..|+.+.++.
T Consensus 258 ~~~l~~~A~~lf~~a~~~g~d~~~gg~~~sl~~D~~~~d~~~r~WpQ~E~l~AA~ala~~~~~~~~y~~~~~R~~~~~~~ 337 (388)
T COG2942 258 RAWLIEAARRLFDIAVADGWDPERGGAYYSLDDDGSPHDRQQRLWPQTEALKAAVALAETTGARERYWQWYARAWDYLWW 337 (388)
T ss_pred hhHHHHHHHHHHHHHHHhccCcccCeEEEEecCCCCcCCHHHhhChHHHHHHHHHHHHhcCCchHHHHHHHHHHHHHHHH
Confidence 0 00001111 2222221 2888899 89999999998888876
Q ss_pred c--CCCCCCCCccccCCCCccccceee-ecCCchhHHHHHHHHHH
Q psy7224 114 I--EKPNGLYPNYLNPKTGHWGQSHIS-MGALGDSFYEYLLKAWI 155 (297)
Q Consensus 114 ~--~~~~gL~p~~i~~~~g~~~~~~~~-~Ga~~DS~yEYLlK~~~ 155 (297)
. ....|++=..+|+..-.- .+ -++.+..||.-+.--|.
T Consensus 338 hl~d~~~G~W~~~l~~dg~~~----~~~k~~~~ktfYH~~~A~~~ 378 (388)
T COG2942 338 HLDDPEYGLWFDKLDEDGEVL----LTLKPGPAKTFYHILRACLE 378 (388)
T ss_pred hcCCCcCCcchhhcCCCCcee----cccCCCCcchhHHHHHHHHH
Confidence 4 356777777776654211 11 35667778876655554
No 28
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=86.20 E-value=3.8 Score=43.66 Aligned_cols=183 Identities=17% Similarity=0.141 Sum_probs=94.8
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
+-.|+..|..++++.+++.|++++++|+..-. .+.+ ++ ..+.....+|. +| .....+=+..|.+.|
T Consensus 593 i~~Ll~l~~~~~~~~~l~~a~~~~~~l~~~~~~~~~~-~~-----~~~~~~~~G~a-HG------~sGi~~aL~~l~~~~ 659 (825)
T cd04792 593 ILVLLSLYELFLSERFLDLALKCGDHLLENASNEDGG-IG-----PAEQPNLTGFA-HG------ASGIAWALLRLYKVT 659 (825)
T ss_pred HHHHHHHHhccCChHHHHHHHHHHHHHHHhhhhccCC-cc-----ccccccccccc-cc------HHHHHHHHHHHHHHc
Confidence 33467788999999999999999999875322 2222 11 11111122332 22 223444577788899
Q ss_pred CChhhHHHHHHHHHHHHhcC-CCCCCCCccc-cCCCCccccceeeecCCchhHHHHHHHHHHh--hCCCCCCCCcccccc
Q psy7224 96 GNPIYREKVEKIRSVISSIE-KPNGLYPNYL-NPKTGHWGQSHISMGALGDSFYEYLLKAWIQ--SNKEDTEGPESFKFT 171 (297)
Q Consensus 96 gd~~y~~~a~~~~~~l~~~~-~~~gL~p~~i-~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l--~g~~~~~~PE~~~~~ 171 (297)
+|++|.+.+.++.+...+.. ...+-||..- +.....|.. |+.|--. -+++.+-. .++. +.....
T Consensus 660 ~d~~~~~~a~~~l~~~~~~~~~~~~~w~~~~~~~~~~~WCh-----G~~GI~l--al~~~~~~~~~~d~-----~~~~~i 727 (825)
T cd04792 660 GDSRYLKLAHKALKYERRLFSEEGWNWPRKDGNSFSAAWCH-----GAPGILL--ARLELLKFNDLDDE-----ELKEEI 727 (825)
T ss_pred CcHHHHHHHHHHHHHHHHhcCHhhcCCCCcCcCCCCCcccC-----CcHHHHH--HHHHHHhcCccchH-----HHHHHH
Confidence 99999999999887665432 2223344100 011123443 3322221 11111111 0100 000000
Q ss_pred -chhhh---hhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhc
Q psy7224 172 -DTLEA---KAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWD 224 (297)
Q Consensus 172 -~~~~~---~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~ 224 (297)
...+. ...........-.+-.++.+-++++.|+|+.|++.+....+.+.....
T Consensus 728 ~~~~~~~~~~~~~~~~slCHG~~Gil~~ll~~~~~~~~~~~~~~a~~~~~~l~~~~~ 784 (825)
T cd04792 728 EIALKTTLKEGFGNNHSLCHGDLGNLEILLYAAKAFGDEKLQELANSLAIKVLSQGK 784 (825)
T ss_pred HHHHHHHHHhcCCCCCeecCCCcchHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHH
Confidence 00000 000001111223455789999999999999999998887776655444
No 29
>PF07470 Glyco_hydro_88: Glycosyl Hydrolase Family 88; InterPro: IPR010905 Unsaturated glucuronyl hydrolase catalyses the hydrolytic release of unsaturated glucuronic acids from oligosaccharides produced by the reactions of polysaccharide lyases [].; PDB: 3K11_A 2GH4_A 2D8L_A 1NC5_A 3PMM_A 2FV1_B 2AHF_A 2FV0_A 2AHG_B 2D5J_A ....
Probab=86.05 E-value=1.2 Score=42.17 Aligned_cols=95 Identities=24% Similarity=0.345 Sum_probs=56.5
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhc-ccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeeh-hhhHhhhCC
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLP-AFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEF-VYLSDVTGN 97 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~-AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf-~~LS~lTgd 97 (297)
++..|..++|+.++..|++.++.++. .+.++.|-... ... .+..+..+.--+.++| .+.++.|||
T Consensus 76 ~~~~y~~t~d~~y~~~~~~~a~~~l~~~~~~~~G~~~~----~~~---------~~~~~wiD~~~M~~p~l~~~~~~tgd 142 (336)
T PF07470_consen 76 LLDLYERTGDEKYKDAAIQAADWLLARRPRTSDGGFWH----NRP---------YPNQVWIDGMYMNLPFLAWAGKLTGD 142 (336)
T ss_dssp HHHHHHHH-THHHHHHHHHHHHHHHHTSCBECTGCBEC----TTT---------STTEEETTHHHHHHHHHHHHHHHHTG
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHHhCCCCCCCcccc----CCC---------CCCceeeccccccHHHHHHHHHHHCC
Confidence 47799999999999999999996664 44445553332 110 1122233322223333 457999999
Q ss_pred hhhHHHHHHHHHHHHhc--CCCCCCCCccccC
Q psy7224 98 PIYREKVEKIRSVISSI--EKPNGLYPNYLNP 127 (297)
Q Consensus 98 ~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~ 127 (297)
++|.+.|.+-.+...+. ....||+--..+.
T Consensus 143 ~~~~~~a~~q~~~~~~~~~d~~tGl~~h~~~~ 174 (336)
T PF07470_consen 143 PKYLDEAVRQFRLTRKYLYDPETGLYYHGYTY 174 (336)
T ss_dssp HHHHHHHHHHHHHHHHHHB-TTTSSBESEEET
T ss_pred cHHHHHHHHHHHHHHHhccCCCCCceeeccCC
Confidence 99999887765544432 2456666444443
No 30
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase. Lanthinoine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as precursor peptides and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans) in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition.
Probab=67.89 E-value=42 Score=32.16 Aligned_cols=141 Identities=11% Similarity=0.084 Sum_probs=78.3
Q ss_pred hhhhccC-CCchHHHHHHHHHHHHhcccC-CCCC-C-cccc-----eee--cCCCCCCCCcCCCCcceecccccceeehh
Q psy7224 21 LTLYSFT-GDPMYRDKAVHIADKMLPAFK-TPTG-I-PHAL-----INV--YTGDSKNYAWASGSASILSELGTLHLEFV 89 (297)
Q Consensus 21 LSAy~Ls-~d~~lL~kA~~lad~Ll~AF~-tp~g-i-P~~~-----vn~--~~g~~~~~~~~~~~~~~lAe~gs~~LEf~ 89 (297)
..+|... +++..++.+++..+.+..-|. ..++ . |... +.. ..+.....+|. +|. + | ..+-+.
T Consensus 182 ~~~~~~~~~~~~~~~~i~~~l~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~wC-hG~---~--G-i~~~l~ 254 (382)
T cd04793 182 ALAKERGIRVDGQLEAIQKIIAWLDRWRLKNRKGPWWPGLITNREQIGGRPNNPNPFRDAWC-YGT---P--G-IARALQ 254 (382)
T ss_pred HHHHHcCCCcCChHHHHHHHHHHHHHHHHhCCCCCCCcccccHHHHhccccccCCCCCCCCC-CCc---H--H-HHHHHH
Confidence 3455555 688888888887777766553 2222 1 1110 111 11122234564 231 1 2 223344
Q ss_pred hhHhhhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCcccc
Q psy7224 90 YLSDVTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFK 169 (297)
Q Consensus 90 ~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~ 169 (297)
.+++.++|+.+.+.+.++.+.+.......+ ...++ .+.. |
T Consensus 255 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~---~~~~~---~lCh-----G----------------------------- 294 (382)
T cd04793 255 LAGKALDDQKLQEAAEKILKAALKDKKQLS---KLISP---TLCH-----G----------------------------- 294 (382)
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHhChhhhc---cCCCC---CcCc-----c-----------------------------
Confidence 677889999999999988776554211110 00000 0000 0
Q ss_pred ccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcccc
Q psy7224 170 FTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYV 227 (297)
Q Consensus 170 ~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~ 227 (297)
.+=.++.+..+|+.|+|+.+.+.+....+.+...++...
T Consensus 295 -------------------~~G~~~~l~~~~~~~~~~~~~~~a~~~~~~~l~~~~~~~ 333 (382)
T cd04793 295 -------------------LAGLLFIFYLLYKDTNTNEFKSALEYLLNQIISSYSEEE 333 (382)
T ss_pred -------------------HHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHhcccc
Confidence 111456677889999999999999888777777666443
No 31
>TIGR02474 pec_lyase pectate lyase, PelA/Pel-15E family. Members of this family are isozymes of pectate lyase (EC 4.2.2.2), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.
Probab=67.03 E-value=7.5 Score=36.66 Aligned_cols=44 Identities=30% Similarity=0.446 Sum_probs=36.4
Q ss_pred eeehhhhHhh---hCChhhHHHHHHHHHHHHhcCCCCCCCCccccCC
Q psy7224 85 HLEFVYLSDV---TGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPK 128 (297)
Q Consensus 85 ~LEf~~LS~l---Tgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~ 128 (297)
+-|...|+++ |+|++|.+++.+..+.|-+++...|-||.+....
T Consensus 47 ~~e~~fLa~~y~~t~d~~y~~A~~rgld~LL~aQypnGGWPQf~p~~ 93 (290)
T TIGR02474 47 VTEIRYLAQVYQQEKNAKYRDAARKGIEYLLKAQYPNGGWPQFYPLK 93 (290)
T ss_pred HHHHHHHHHHHHhcCchhHHHHHHHHHHHHHhhhCCCCCcCcccCCc
Confidence 4466666655 9999999999999999999888899999887443
No 32
>PF07221 GlcNAc_2-epim: N-acylglucosamine 2-epimerase (GlcNAc 2-epimerase); InterPro: IPR010819 N-acylglucosamine 2-epimerase (AGE, 5.3.1.8 from EC) reversibly converts N-acyl-D-glucosamine to N-acyl-D-mannosamine, the latter ultimately being converted to cytidine 5'- monophospho-N-acetylneuraminic acid, which is used as a precursor for the synthesis of connective tissues, blood cells and cellular macromolecules. AGE is a renin-binding protein (RnBP), which might act as a cellular rennin inhibitor. AGE functions as a homodimer, where monomer has an alpha(6)/alpha(6)-barrel structure commonly found in glucoamylases and cellulases []. This family contains a number of eukaryotic and bacterial AGE enzymes.; GO: 0004476 mannose-6-phosphate isomerase activity, 0006013 mannose metabolic process; PDB: 1FP3_B 2RGK_B 3GT5_A 2GZ6_B 2ZBL_E 2AFA_A.
Probab=66.66 E-value=3.1 Score=39.43 Aligned_cols=190 Identities=20% Similarity=0.293 Sum_probs=105.9
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccCCC-CCCcccceeecCCCCCCCCcCCCCcceeccccc--ceee-hhhhH
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTP-TGIPHALINVYTGDSKNYAWASGSASILSELGT--LHLE-FVYLS 92 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp-~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs--~~LE-f~~LS 92 (297)
|=||-. +..++++..++.|+++-+.|..-|..| .|.-....+. .|.. +....+ ..+| +..|.
T Consensus 87 l~ala~-~~~tg~~~~~~~A~~~~~~l~~~~~d~~~g~~~~~~~~--------~~~~-----~r~~n~~mhl~eA~l~l~ 152 (346)
T PF07221_consen 87 LLALAE-ARATGDPEALELAEQTLEFLERRFWDPEGGGYRESFDP--------DWSP-----PRGQNPHMHLLEAFLALY 152 (346)
T ss_dssp HHHHHH-HHCTT-TTHHHHHHHHHHHHHHHTEETTTTEE--EETT--------TSSC-----BEEHHHHHHHHHHHHHHH
T ss_pred HHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcccccCcceeccCC--------cccc-----CCCCChhHHHHHHHHHHH
Confidence 334444 778999999999999999998887544 3432211111 0110 000111 2233 56799
Q ss_pred hhhCChhhHHHHHHHHHHHHhc--CCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccc
Q psy7224 93 DVTGNPIYREKVEKIRSVISSI--EKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKF 170 (297)
Q Consensus 93 ~lTgd~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~ 170 (297)
++|||++|.+.|.++.+.+... ....|.++.+++.. |... .++..+ + .++
T Consensus 153 ~~~~~~~~~~~a~~l~~~~~~~f~~~~~g~~~E~f~~d---w~~~---~~~~~~----------------d--~~~---- 204 (346)
T PF07221_consen 153 EATGDPRYLDRAEELLDLFLDRFADPESGALPEFFDRD---WNPL---PDGSGD----------------D--TFR---- 204 (346)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTTCHHCCTTEETSEEETT---SEBE---TTTTTT----------------H--STT----
T ss_pred HhccCHHHHHHHHHHHHHHHHHHHHhccCeeeeeeccc---cccc---cccccc----------------c--ccc----
Confidence 9999999999999999877642 35678888887754 3210 011111 0 000
Q ss_pred cchhhhhhhcccccccCCCh-hhhhhhhhhhhhc-----CCCCchhhhHHHHH-HHHHhhccccc-cccccccccCCCCC
Q psy7224 171 TDTLEAKAYRSQDKYYILRP-EVIESYFYLWRVT-----KDPKYREWGWDYVQ-MMKHAWDNYVT-YAWGKNELKPLSRR 242 (297)
Q Consensus 171 ~~~~~~~~~~~~~~~y~lRP-E~iES~fyl~r~T-----~d~~yre~~w~i~~-a~~~~~~~y~g-ya~~~Dv~~p~s~~ 242 (297)
.+..-| =.+|..++|.++- +++.+.+.|.+++. ++...|....| +-...|......
T Consensus 205 --------------~~~~~pGH~~E~~wll~~~~~~~~~~~~~~~~~a~~l~~~~~~~G~d~~~gG~~~~~d~~g~~~-- 268 (346)
T PF07221_consen 205 --------------GRIVEPGHDFEWAWLLLEAARLTGRGDPDWLERARRLFDFALEHGWDREGGGLFYSVDRDGKPP-- 268 (346)
T ss_dssp --------------TSSB-HHHHHHHHHHHHHHHHHCHCT-HTHHHHHHHHHHHHHHHHBSTTTSSB-SEEETTS-BS--
T ss_pred --------------cCccCCchhHHHHHHHHHHHHhcccccHHHHHHHHHHHHHHHHheEecCCCeEEEEEeCCCCcc--
Confidence 011112 2678888887665 67788888877644 56667765544 222222221111
Q ss_pred CCCCCCCCCCcchhhHHhhhhHHHHhcCc
Q psy7224 243 GHSGSIFGSAELGMTIIDGLDTLYIMGLT 271 (297)
Q Consensus 243 d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~ 271 (297)
+.+ ..-+.-+|+|+.++.+..-
T Consensus 269 ~~~-------k~wW~q~Eal~a~~~~~~~ 290 (346)
T PF07221_consen 269 DRS-------KRWWPQAEALKALLAAYEL 290 (346)
T ss_dssp ST--------EEHHHHHHHHHHHHHHHHH
T ss_pred ccC-------ccccHHHHHHHHHHHHHhc
Confidence 111 1224589999999888744
No 33
>PF11329 DUF3131: Protein of unknown function (DUF3131); InterPro: IPR021478 This bacterial family of proteins has no known function.
Probab=58.62 E-value=1e+02 Score=30.07 Aligned_cols=206 Identities=17% Similarity=0.277 Sum_probs=106.3
Q ss_pred hhhhhhhhhhccC--CCchHHHHHHHHHHHH--hcccCCCCCCcccceeecCCCCCCCCcCCCCc--ceecccccceeeh
Q psy7224 15 RFIGAILTLYSFT--GDPMYRDKAVHIADKM--LPAFKTPTGIPHALINVYTGDSKNYAWASGSA--SILSELGTLHLEF 88 (297)
Q Consensus 15 R~LGGLLSAy~Ls--~d~~lL~kA~~lad~L--l~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~--~~lAe~gs~~LEf 88 (297)
=+|-+|+||.+|- ..+.+.++...+-.-| ||-| +.++|...+|..++.+.++.-.+... -+--++|-|..=+
T Consensus 38 ~yL~al~AA~~lglIs~~e~~~Rl~~~L~tL~~lpl~--~g~lPn~~Y~t~T~~~~~~~~~p~~~~gwSavD~GrLl~~L 115 (367)
T PF11329_consen 38 SYLMALVAARELGLISREEFDQRLEKTLATLEKLPLF--RGHLPNKWYNTQTGQPVDYGNQPGERIGWSAVDIGRLLIAL 115 (367)
T ss_pred HHHHHHHHHHHcCCCCHHHHHHHHHHHHHHHHhCccc--CCcCccceeecCcCcccccCCCCCccCCccHhhHHHHHHHH
Confidence 4678899999986 3444555544444444 5656 46899999999988776532111000 0112445444444
Q ss_pred hhhHhhhCChhhHHHHHHHHHH--HHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCC--C
Q psy7224 89 VYLSDVTGNPIYREKVEKIRSV--ISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTE--G 164 (297)
Q Consensus 89 ~~LS~lTgd~~y~~~a~~~~~~--l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~--~ 164 (297)
..|.+ ..|.|.+.+.++... +...-...-|+...++...... .....+ .|=||.-+.+.|-|-.... .
T Consensus 116 ~il~~--~~P~~a~~v~~l~~~W~~~~~i~~G~l~ga~~~~~~~~~-~qegRl-----Gye~YAA~~~~lwG~~~~~a~~ 187 (367)
T PF11329_consen 116 RILKQ--RYPEYAEQVDALVLRWNFCRLIDDGELYGATVNKGQEQY-RQEGRL-----GYEEYAARGFQLWGFDVPKAYR 187 (367)
T ss_pred HHHHH--HCchHHHHHHHHHHhCCHHHHhcCCeeeeeEecCCceEE-eecccc-----cHHHHHHHHHHHcCCCcccccc
Confidence 33332 567787777776553 2222233445555554431111 111122 3679999999998865443 2
Q ss_pred Cccccccc--hhhhhhhcccccccC--CChhhhhhhhhhhhh--cCC-CCchhhhHHHHHHHHHhhccccccccc
Q psy7224 165 PESFKFTD--TLEAKAYRSQDKYYI--LRPEVIESYFYLWRV--TKD-PKYREWGWDYVQMMKHAWDNYVTYAWG 232 (297)
Q Consensus 165 PE~~~~~~--~~~~~~~~~~~~~y~--lRPE~iES~fyl~r~--T~d-~~yre~~w~i~~a~~~~~~~y~gya~~ 232 (297)
|+-+.+.. +... .....+.... ..|=+-|+ |+|.-+ --| +..++.+|.|+++.++.|+.-......
T Consensus 188 ~~~~~~~~i~Gv~v-p~d~r~~~~~~~~~~v~seP-ylL~glE~G~d~~~~~~~a~~iy~aQe~R~~~tg~lta~ 260 (367)
T PF11329_consen 188 PEPYKTVDIYGVSV-PYDTRDPRFFGAHNYVVSEP-YLLDGLEFGFDPPESAEFADRIYQAQERRYQQTGILTAR 260 (367)
T ss_pred CCCcceeEEeceEc-cccCccchhccCCCcccchh-HHHHHHHhCCCchhHHHHHHHHHHHHHHHHhccCCeeee
Confidence 22222211 1000 0000111110 11112232 222222 225 668999999999999999876655433
No 34
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=58.17 E-value=22 Score=34.26 Aligned_cols=80 Identities=25% Similarity=0.336 Sum_probs=56.3
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhC
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTG 96 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTg 96 (297)
|=|+.-+|+-|+|+.+|+-.+...|-.+- ..|+|--.||-- +.-+=+-.|.+.||
T Consensus 42 lyGv~~~~eAT~d~~yl~~l~~~~d~~i~----~~g~~~~~id~i---------------------~~g~~L~~L~e~T~ 96 (357)
T COG4225 42 LYGVARAYEATGDAEYLDYLKTWFDEQID----EGGLPPRNIDHI---------------------AAGLTLLPLYEQTG 96 (357)
T ss_pred HHHHHHHHHHcCcHHHHHHHHHHHHhhhc----cCCCCccchhhh---------------------ccCceeeehhhhhC
Confidence 45899999999999999999999887764 234443322211 11223557999999
Q ss_pred ChhhHHHHHHHHHHHHhc-CCCCCCC
Q psy7224 97 NPIYREKVEKIRSVISSI-EKPNGLY 121 (297)
Q Consensus 97 d~~y~~~a~~~~~~l~~~-~~~~gL~ 121 (297)
||+|..+|.+..+.+... +...|-+
T Consensus 97 ~~~Yl~~a~~~a~~l~~~~Rt~eG~f 122 (357)
T COG4225 97 DPRYLEAAIKLASWLVHEPRTKEGGF 122 (357)
T ss_pred CHHHHHHHHHHHHHHhhCcccCCCcc
Confidence 999999999988877553 3445543
No 35
>COG3533 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=58.00 E-value=32 Score=34.96 Aligned_cols=115 Identities=17% Similarity=0.359 Sum_probs=70.3
Q ss_pred hhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCC--Ccccc-----ceeeecCCchhHHHHHHHHHHhhCCCCCCCCc
Q psy7224 94 VTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKT--GHWGQ-----SHISMGALGDSFYEYLLKAWIQSNKEDTEGPE 166 (297)
Q Consensus 94 lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~--g~~~~-----~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE 166 (297)
-+|||.-.+.++.+.+.+.+.+..+|-+.......- -+|++ ..++.| -..|=++-.+.++|++.-. +
T Consensus 81 ~~~dp~Lekr~D~vi~~~a~~QdedGYl~~~~q~~~pe~Rw~nlr~~HelY~ag----hLieg~va~~qaTGkr~ll--d 154 (589)
T COG3533 81 NKGDPELEKRIDEVVEELARAQDEDGYLGGWFQADFPEERWGNLRPNHELYCAG----HLIEGGVAAHQATGKRRLL--D 154 (589)
T ss_pred cCCCHHHHHHHHHHHHHHHHhhccCCcccceeeccCchhhhhccccchHHHHhH----HHHhhhhHHHHhhCcchHH--H
Confidence 479999999999999999988888887766544332 12221 111111 2334456667788877541 0
Q ss_pred cc-cccchhhhhhh---cccccccCCChhhhhhhhhhhhhcCCCCchhhhHHH
Q psy7224 167 SF-KFTDTLEAKAY---RSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDY 215 (297)
Q Consensus 167 ~~-~~~~~~~~~~~---~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i 215 (297)
++ .+..-. .... ..+...|.--||+-|.+-=|||+|||++|.+.|...
T Consensus 155 V~~rlADhi-~tvfgp~~~q~~g~~gH~eielAl~~Ly~~Tg~~rYL~LA~~F 206 (589)
T COG3533 155 VVCRLADHI-ATVFGPEEDQVPGYCGHPEIELALAELYRLTGDQRYLDLARRF 206 (589)
T ss_pred HHHHHHHhh-hhhcCccccccccccCCCchhHHHHHHHHHhcChHHHHHHHHH
Confidence 00 000000 0000 013345677799999999999999999999877643
No 36
>PF03663 Glyco_hydro_76: Glycosyl hydrolase family 76 ; InterPro: IPR005198 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of alpha-1,6-mannanases belonging to glycoside hydrolase family 76 (GH76 from CAZY).; PDB: 3K7X_A.
Probab=57.47 E-value=9.5 Score=36.91 Aligned_cols=85 Identities=25% Similarity=0.286 Sum_probs=52.0
Q ss_pred hccCCCchHHHHHHHHHHHHhc-c-cCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCCh-hh
Q psy7224 24 YSFTGDPMYRDKAVHIADKMLP-A-FKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNP-IY 100 (297)
Q Consensus 24 y~Ls~d~~lL~kA~~lad~Ll~-A-F~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~-~y 100 (297)
|..++|+.+|++|+++-+-+.. - .|+.+|+-+..++....-.... ...-.--.|+++-=...|.++|+++ +|
T Consensus 168 ~~~t~~~~Yl~~A~~~~~W~~~~~L~d~~~g~v~Dg~~~~~~c~~~~-----~~~~TYNqG~~l~a~~~Ly~~T~~~~~y 242 (370)
T PF03663_consen 168 YRITGDQTYLDWAKKIYDWMRDSGLIDPSTGLVYDGINIDGNCTNIN-----KTKWTYNQGVFLGAAAYLYNATNDEQTY 242 (370)
T ss_dssp HHHH--HHHHHHHHHHHHHHHH-HHB--TTS-B--EE-TTSSS-B-T-----T---HHHHHHHHHHHHHHHHHH--H-HH
T ss_pred HHhcCChHHHHHHHHHHHHhhcceeEECCCcEEEeCCccCCCCCcCC-----CceechHHHHHHHHHHHHHHhcCCccHH
Confidence 4567999999999999999876 3 4677798888886655211110 1111234567766778899999888 99
Q ss_pred HHHHHHHHHHHHh
Q psy7224 101 REKVEKIRSVISS 113 (297)
Q Consensus 101 ~~~a~~~~~~l~~ 113 (297)
.+.|.++.+...+
T Consensus 243 l~~A~~la~~~~~ 255 (370)
T PF03663_consen 243 LDRAEKLADAAIN 255 (370)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH
Confidence 9999998886644
No 37
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region. Glucuronyl C5-epimerases catalyse the conversion of D-glucuronic acid (GlcUA) to L-iduronic acid (IdceA) units during the biosynthesis of glycosaminoglycans [].; GO: 0016857 racemase and epimerase activity, acting on carbohydrates and derivatives, 0006024 glycosaminoglycan biosynthetic process, 0016021 integral to membrane
Probab=55.28 E-value=15 Score=32.49 Aligned_cols=77 Identities=26% Similarity=0.455 Sum_probs=45.9
Q ss_pred hhhhhccC---CC---chHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccc---cceeehhh
Q psy7224 20 ILTLYSFT---GD---PMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELG---TLHLEFVY 90 (297)
Q Consensus 20 LLSAy~Ls---~d---~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~g---s~~LEf~~ 90 (297)
|++-||+. ++ ..+.++..+=-..++|.||+..+--|.--.+..+.. ..+|.-. .-+--+..
T Consensus 101 L~GLyd~~~~~~~~~A~~lf~~Gl~sLk~~Lp~yD~G~wS~Ydl~h~~~~~~----------~~~a~~~YH~lHi~qL~~ 170 (189)
T PF06662_consen 101 LIGLYDYYRLTGDEEAKELFDKGLKSLKKMLPLYDTGSWSRYDLRHFTLGNA----------PNIARWDYHRLHIQQLKW 170 (189)
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhhhcCCCchhhccccccccC----------cCcCcchHHHHHHHHHHH
Confidence 45667766 33 246677777777788999997665443211111111 1122111 22334667
Q ss_pred hHhhhCChhhHHHHHH
Q psy7224 91 LSDVTGNPIYREKVEK 106 (297)
Q Consensus 91 LS~lTgd~~y~~~a~~ 106 (297)
|..+||||.|.+.|++
T Consensus 171 L~~it~d~~f~~~a~r 186 (189)
T PF06662_consen 171 LYSITGDPIFKEYAER 186 (189)
T ss_pred HHHhcCCHHHHHHHHH
Confidence 9999999999998875
No 38
>cd04434 LanC_like LanC-like proteins. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthionine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as a precursor peptide and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans), in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition. A related domain is also present in LanM and other pro- and eukaryotic proteins of unknown function.
Probab=55.09 E-value=39 Score=30.98 Aligned_cols=86 Identities=19% Similarity=0.160 Sum_probs=53.5
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI 99 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~ 99 (297)
|+-++..+.++.+...++.+...+...++.+.+.+.+.. .........+|. +| .+| ..+=+..+.+.|+|++
T Consensus 168 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~wC-hG-----~~G-i~~~l~~~~~~~~~~~ 239 (343)
T cd04434 168 LLLLYKKTVDKSLEALIKALLKYERRLQDDSGGFWWPSR-SNGGNRFLVAWC-HG-----APG-ILLALLLAYKALGDDK 239 (343)
T ss_pred HHHHHHhcCChhHHHHHHHHHHHHHHccCCCCCCCCCCC-CCCCccccceec-CC-----Chh-HHHHHHHHHHHcCcHH
Confidence 455566666777777777777777777777666655411 111122234554 22 122 3334557889999999
Q ss_pred hHHHHHHHHHHHHh
Q psy7224 100 YREKVEKIRSVISS 113 (297)
Q Consensus 100 y~~~a~~~~~~l~~ 113 (297)
+.+.+.++.+.+.+
T Consensus 240 ~~~~~~~~~~~~~~ 253 (343)
T cd04434 240 YDEAAEKALELAWK 253 (343)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887665
No 39
>cd04434 LanC_like LanC-like proteins. LanC is the cyclase enzyme of the lanthionine synthetase. Lanthionine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as a precursor peptide and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans), in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition. A related domain is also present in LanM and other pro- and eukaryotic proteins of unknown function.
Probab=49.20 E-value=72 Score=29.20 Aligned_cols=193 Identities=16% Similarity=0.135 Sum_probs=97.0
Q ss_pred hhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCC-CCCcccceeecCCCCCCCCcCCCCcceecccccceeehhh
Q psy7224 12 TTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTP-TGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVY 90 (297)
Q Consensus 12 ttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp-~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~ 90 (297)
-..=++-.|+..|+.++++.+++.|.++++.|+...... .+...... ...+ ....+|. ..+....+-+..
T Consensus 100 G~aG~~~~ll~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-~~~~-~~~~g~~-------HG~~Gi~~~l~~ 170 (343)
T cd04434 100 GLAGLLLALLLLYKTFGEEIFLELIRKILDYLLELGKNGDGKIRWPMY-FPEG-RVNLGLA-------HGLAGILLALLL 170 (343)
T ss_pred chHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHhhhhccCCCceeee-ccCC-ccccchh-------hhhHHHHHHHHH
Confidence 334445557778888889999999999999998766532 22211100 0001 1112232 123345556677
Q ss_pred hHhhhCChhhHHHHHHHHHHHHhcCCC-CCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCcccc
Q psy7224 91 LSDVTGNPIYREKVEKIRSVISSIEKP-NGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFK 169 (297)
Q Consensus 91 LS~lTgd~~y~~~a~~~~~~l~~~~~~-~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~ 169 (297)
+.+.+.++.+...++.+.+.+.+.... .+.++.... ....-.....+-|+.|-. --+++.+-.+++... ..
T Consensus 171 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~wChG~~Gi~--~~l~~~~~~~~~~~~-----~~ 242 (343)
T cd04434 171 LYKKTVDKSLEALIKALLKYERRLQDDSGGFWWPSRS-NGGNRFLVAWCHGAPGIL--LALLLAYKALGDDKY-----DE 242 (343)
T ss_pred HHHhcCChhHHHHHHHHHHHHHHccCCCCCCCCCCCC-CCCccccceecCCChhHH--HHHHHHHHHcCcHHH-----HH
Confidence 888888999988888888776654333 333332100 000001111222333322 233344444442111 00
Q ss_pred ccchhhhhhhc------ccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHH
Q psy7224 170 FTDTLEAKAYR------SQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKH 221 (297)
Q Consensus 170 ~~~~~~~~~~~------~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~ 221 (297)
.....-....+ .......--.=+++.+-.+++.|+++.+++.+.+.......
T Consensus 243 ~~~~~~~~~~~~~~~~~~~~~lChG~~G~~~~ll~l~~~~~~~~~~~~a~~~~~~~~~ 300 (343)
T cd04434 243 AAEKALELAWKRGLLELKNPGLCHGIAGNLLILLLLYKLTGDLKFLARALALALLLIS 300 (343)
T ss_pred HHHHHHHHHHHhhhccCCCCCcCcCccchHHHHHHHHHHhCCHHHHHHHHHHHHHHHH
Confidence 00000000000 00011111234667788899999999999988776654443
No 40
>PF06917 Pectate_lyase_2: Periplasmic pectate lyase; InterPro: IPR010702 This family consists of several Enterobacterial periplasmic pectate lyase proteins. A major virulence determinant of the plant-pathogenic enterobacterium Erwinia chrysanthemi is the production of pectate lyase enzymes that degrade plant cell walls [].; GO: 0016837 carbon-oxygen lyase activity, acting on polysaccharides, 0045490 pectin catabolic process, 0005737 cytoplasm; PDB: 2V8J_A 2V8K_A 2V8I_A.
Probab=46.36 E-value=18 Score=36.63 Aligned_cols=98 Identities=18% Similarity=0.261 Sum_probs=57.5
Q ss_pred CccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHH-hcccCCCCCCcccceeecCCCCCCCCcCCCCcceeccccccee
Q psy7224 8 SVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKM-LPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHL 86 (297)
Q Consensus 8 svFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~L-l~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~L 86 (297)
.-+...--||=-++-||-+|+|+.|-..|..++... |....++++-. +.+|..+. .+. -=+.+
T Consensus 381 ~~~p~~~~yll~~vra~~~s~D~~Lw~~~~~m~~~~gLGdig~~~~~~-~~~~~~~~--------------~~s-p~~L~ 444 (557)
T PF06917_consen 381 KPFPADPDYLLPYVRAYRLSRDPELWDLARTMAHHFGLGDIGNAAGKE-PRVNMQTD--------------NAS-PYLLF 444 (557)
T ss_dssp --EE--HHHHHHHHHHHHHS--HHHHHHHHHHHHHTT-EE-TTBTTBS--EE-TT--------------------HHHHH
T ss_pred ccccCchhHhHHHHHHHHcCCCHHHHHHHHHHHhhcCcccccCccccc-cccccCCC--------------CCC-HHHHH
Confidence 334555556667889999999999999888888764 33344433322 12222211 111 01334
Q ss_pred ehhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCC
Q psy7224 87 EFVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLY 121 (297)
Q Consensus 87 Ef~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~ 121 (297)
-..-|-+.|++++|.+.|.++-+.|.++....|||
T Consensus 445 allEL~~atq~~~~l~lA~~~g~~l~~~~~~~GlF 479 (557)
T PF06917_consen 445 ALLELYQATQDARYLELADQVGENLFEQHFHRGLF 479 (557)
T ss_dssp HHHHHHHHH--HHHHHHHHHHHHHHHHHHEETTEE
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHHccCcee
Confidence 45668999999999999999999888776667875
No 41
>cd04794 euk_LANCL eukaryotic Lanthionine synthetase C-like protein. This family contains the lanthionine synthetase C-like proteins 1 and 2 which are related to the bacterial lanthionine synthetase components C (LanC). LANCL1 and LANCL2 (testes-specific adriamycin sensitivity protein) are thought to be peptide-modifying enzyme components in eukaryotic cells. Both proteins are produced in large quantities in the brain and testes and may have role in the immune surveillance of these organs.
Probab=45.65 E-value=43 Score=31.63 Aligned_cols=74 Identities=15% Similarity=0.182 Sum_probs=49.9
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCCh
Q psy7224 19 AILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNP 98 (297)
Q Consensus 19 GLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~ 98 (297)
.|+-++...+|+.+++.|+..++.+.. .|++..... -|-.-+| ...-|.++.+.|+++
T Consensus 232 ~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~g~~~~~~~----------------lCHG~~G-~~~~lL~~~~~~~~~ 289 (343)
T cd04794 232 LLAKAYLVFKEEQYLEAAIKCGELIWK-----RGLLKKGPG----------------LCHGIAG-NAYAFLLLYRLTGDL 289 (343)
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHH-----hCCccCCCc----------------cccCccc-hHHHHHHHHHHhCcH
Confidence 456788888888889888888876532 233321111 1122233 234577899999999
Q ss_pred hhHHHHHHHHHHHHhc
Q psy7224 99 IYREKVEKIRSVISSI 114 (297)
Q Consensus 99 ~y~~~a~~~~~~l~~~ 114 (297)
+|.+.|.++.+.+.+.
T Consensus 290 ~~~~~a~~~~~~~~~~ 305 (343)
T cd04794 290 KYLYRACKFAEFLINY 305 (343)
T ss_pred HHHHHHHHHHHHHhcc
Confidence 9999999988877654
No 42
>PF06662 C5-epim_C: D-glucuronyl C5-epimerase C-terminus; InterPro: IPR010598 This entry consists of known or predicted D-glucuronyl C5-epimerases which share a common C-terminal region. Glucuronyl C5-epimerases catalyse the conversion of D-glucuronic acid (GlcUA) to L-iduronic acid (IdceA) units during the biosynthesis of glycosaminoglycans [].; GO: 0016857 racemase and epimerase activity, acting on carbohydrates and derivatives, 0006024 glycosaminoglycan biosynthetic process, 0016021 integral to membrane
Probab=45.46 E-value=16 Score=32.27 Aligned_cols=34 Identities=15% Similarity=0.227 Sum_probs=27.1
Q ss_pred hhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCC
Q psy7224 88 FVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLY 121 (297)
Q Consensus 88 f~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~ 121 (297)
|.+.-++|||++|.++|.++.+.+.......|+.
T Consensus 39 l~RAy~~t~d~~Yl~aA~~al~~f~~~~~~GG~~ 72 (189)
T PF06662_consen 39 LARAYQLTGDEKYLDAAKKALNSFKVPVEEGGVL 72 (189)
T ss_pred HHHHHHhHCCHHHHHHHHHHHHHhcChHhhCCee
Confidence 5688999999999999999999877544444543
No 43
>cd04792 LanM-like LanM-like proteins. LanM is a bifunctional enzyme, involved in the synthesis of class II lantibiotics. It is responsible for both the dehydration and the cyclization of the precursor-peptide during lantibiotic synthesis. The C-terminal domain shows similarity to LanC, the cyclase component of the lan operon, but the N terminus seems to be unrelated to the dehydratase, LanB.
Probab=44.96 E-value=1.4e+02 Score=31.94 Aligned_cols=72 Identities=14% Similarity=0.086 Sum_probs=46.7
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI 99 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~ 99 (297)
|+.+|..++++.+++.|.++++.+...-. +.. ...+ +...+...+=+..|.+.|+++.
T Consensus 550 L~~l~~~~~~~~~~~~a~~~~~~l~~~~~-----~~~----------~~D~-------~~G~aGii~~Ll~l~~~~~~~~ 607 (825)
T cd04792 550 LTHLGKLLKDDRLLNLAKEILDLIDELIE-----KDE----------KLDF-------ISGAAGLILVLLSLYELFLSER 607 (825)
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHhhc-----ccc----------CCCE-------eeecHHHHHHHHHHHhccCChH
Confidence 34556678899999999999888754211 000 1111 1222233334567888999999
Q ss_pred hHHHHHHHHHHHHh
Q psy7224 100 YREKVEKIRSVISS 113 (297)
Q Consensus 100 y~~~a~~~~~~l~~ 113 (297)
|.+.|.++.+.+.+
T Consensus 608 ~l~~a~~~~~~l~~ 621 (825)
T cd04792 608 FLDLALKCGDHLLE 621 (825)
T ss_pred HHHHHHHHHHHHHH
Confidence 99999998887754
No 44
>COG4225 Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins [General function prediction only]
Probab=44.02 E-value=80 Score=30.57 Aligned_cols=190 Identities=21% Similarity=0.276 Sum_probs=105.4
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI 99 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~ 99 (297)
|+--|+-++|+.+|..|+++|+.|+.-=.|..|.-...+. .+ ..-|.+ .|=-+|.+ +.++++.||+|.
T Consensus 88 L~~L~e~T~~~~Yl~~a~~~a~~l~~~~Rt~eG~f~H~~~----~p-~Q~W~D----tL~Ma~~F---~ak~g~~~~~~e 155 (357)
T COG4225 88 LLPLYEQTGDPRYLEAAIKLASWLVHEPRTKEGGFQHKVK----YP-HQMWLD----TLYMAGLF---LAKYGQVTGRPE 155 (357)
T ss_pred eeehhhhhCCHHHHHHHHHHHHHHhhCcccCCCccccccC----ch-hHhhhc----chhhhhHH---HHHHHHHhCCHH
Confidence 3455677899999999999999998544666665443332 11 123532 12233333 456789999999
Q ss_pred hHHHHHHHHHHHHh-cC-CCCCCCCccccCCC-Cccccceee---ecCCchhHHHHHHHH-HHhhCCCCCCCCcccccc-
Q psy7224 100 YREKVEKIRSVISS-IE-KPNGLYPNYLNPKT-GHWGQSHIS---MGALGDSFYEYLLKA-WIQSNKEDTEGPESFKFT- 171 (297)
Q Consensus 100 y~~~a~~~~~~l~~-~~-~~~gL~p~~i~~~~-g~~~~~~~~---~Ga~~DS~yEYLlK~-~~l~g~~~~~~PE~~~~~- 171 (297)
|.+-+.+-+....+ .+ +..||+---+|.+. +.|..+..+ +=|.+.+-|-+-|=. --+..+..+ ......
T Consensus 156 ~~d~~~~QF~~~~~~l~Dp~TGL~YH~wd~~~~~~w~~~~sG~~~fWaRg~gW~~mal~d~le~lp~~~~---~r~~l~~ 232 (357)
T COG4225 156 YFDEALYQFSLHEKYLRDPETGLYYHGWDEDGTMPWANNESGEPAFWARGNGWYAMALADLLELLPEDHP---DRRELLN 232 (357)
T ss_pred HHHHHHHHHHHHHHHccCCCcCceEEeeccCCCCccccccCCCceeeecccchHHHHHHHHHHhCCCCCc---hHHHHHH
Confidence 99988776554433 23 45689877777554 445443322 234566666554332 223332222 100000
Q ss_pred ---chhhhhhhc----------ccccc-cCCChhhhhhhhhhhhhcC-------CCCchhhhHHHHHHHHHhhcc
Q psy7224 172 ---DTLEAKAYR----------SQDKY-YILRPEVIESYFYLWRVTK-------DPKYREWGWDYVQMMKHAWDN 225 (297)
Q Consensus 172 ---~~~~~~~~~----------~~~~~-y~lRPE~iES~fyl~r~T~-------d~~yre~~w~i~~a~~~~~~~ 225 (297)
....+ ..+ +-|.. =.=-||+--|.-++|-+-+ +++|...+.+.++++..+..-
T Consensus 233 ~l~d~v~a-l~r~Qde~GlW~tiLDd~~~~sy~EsSaSa~faYallkgi~~G~l~~~~~~~~~kA~~aLl~~i~~ 306 (357)
T COG4225 233 VLRDLVDA-LIRYQDESGLWHTILDDGRPGSYLESSASAGFAYALLKGINLGILDPEYAPVAEKALDALLGHIDE 306 (357)
T ss_pred HHHHHHHH-HHHhhccccchhhhhccCCCCCchhhhHHHHHHHHHHHHHhcCCCCchhhHHHHHHHHHHHhhccc
Confidence 00000 001 11110 0011366667777776644 788888888888888876543
No 45
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms]
Probab=43.43 E-value=27 Score=37.69 Aligned_cols=70 Identities=17% Similarity=0.365 Sum_probs=48.1
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCCh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNP 98 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~ 98 (297)
|+|-|.++..|.+|+.|.-+|+.|+.--- +-+ -| .+.+|- + ..+....+-+..|=+.||++
T Consensus 751 L~~iYk~~~epk~l~~ais~~~~l~~~~v~~d~-s~----~~l~gf-----------s--hg~sgi~~tL~~ly~~T~e~ 812 (963)
T COG4403 751 LVSIYKLTDEPKFLELAISLGRILMEKIVGNDS-SE----TVLLGF-----------S--HGASGIILTLLKLYEATGEE 812 (963)
T ss_pred HHHHHhhccchHHHHHHHHHHHHHHHHhhcccc-cc----ceeccc-----------c--cchHHHHHHHHHHHHhcCcH
Confidence 67899999999999999999999994111 111 01 011111 1 12334577788999999999
Q ss_pred hhHHHHHHH
Q psy7224 99 IYREKVEKI 107 (297)
Q Consensus 99 ~y~~~a~~~ 107 (297)
+|..++...
T Consensus 813 ~l~~~i~e~ 821 (963)
T COG4403 813 SLLKKIKEL 821 (963)
T ss_pred HHHHHHHHH
Confidence 998877664
No 46
>PRK11097 endo-1,4-D-glucanase; Provisional
Probab=42.59 E-value=1.1e+02 Score=29.90 Aligned_cols=102 Identities=12% Similarity=0.190 Sum_probs=60.4
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhccc-CCCCCCcccceeecCCCCCCCCcCCCCcceecccccceee-hhhhHhhhCC
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAF-KTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLE-FVYLSDVTGN 97 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF-~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LE-f~~LS~lTgd 97 (297)
||=|..+=+++.+++.|+.|...|+.-= ..-.|+ ...+.+ |. .++...+...+ .-+=+... |..+++++++
T Consensus 125 Ll~A~~~W~~~~Y~~~A~~ll~~I~~~ev~~~~g~-g~~LlP--G~---~gF~~~~~~~~-NPSY~~p~~~~~fa~~~~~ 197 (376)
T PRK11097 125 LLEAGRLWKEPRYTALGTALLKRIAREEVVTVPGL-GSMLLP--GP---VGFADDGSWRL-NPSYLPPQLLRRFARFLPG 197 (376)
T ss_pred HHHHHHhhCcHHHHHHHHHHHHHHHHhcccccCCC-ceeecc--cc---ccccCCCCCeE-CcccccHHHHHHHHHhcCC
Confidence 4445555578889999999999988621 111221 001111 10 00000000000 11111222 6678999999
Q ss_pred hhhHHHHHHHHHHHHhcCCCCCCCCccccCCC
Q psy7224 98 PIYREKVEKIRSVISSIEKPNGLYPNYLNPKT 129 (297)
Q Consensus 98 ~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~ 129 (297)
+.+.+.++..++.|.+.. ..||.|..+....
T Consensus 198 ~~W~~l~~~~~~lL~~~a-~tGL~PDWv~~~~ 228 (376)
T PRK11097 198 GPWAALAATNARLLLETA-PKGFSPDWVRYQK 228 (376)
T ss_pred chHHHHHHHHHHHHHHhc-ccCCCCcceeEcC
Confidence 999999999999998766 7899999987654
No 47
>PF09492 Pec_lyase: Pectic acid lyase; InterPro: IPR012669 Members of this family are isozymes of pectate lyase (4.2.2.2 from EC), also called polygalacturonic transeliminase and alpha-1,4-D-endopolygalacturonic acid lyase.; PDB: 1R76_A 1GXM_B 1GXN_A 1GXO_A.
Probab=40.38 E-value=29 Score=32.74 Aligned_cols=39 Identities=26% Similarity=0.409 Sum_probs=28.1
Q ss_pred hHhhhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCC
Q psy7224 91 LSDVTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKT 129 (297)
Q Consensus 91 LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~ 129 (297)
+-+.|+|++|.+++.+..+.|.+.+...|-||.+.-...
T Consensus 51 ~y~~t~d~~y~~A~~kgl~ylL~aQypnGGWPQ~yP~~~ 89 (289)
T PF09492_consen 51 VYQATKDPRYREAFLKGLDYLLKAQYPNGGWPQFYPLRG 89 (289)
T ss_dssp HHHHCG-HHHHHHHHHHHHHHHHHS-TTS--BSECS--S
T ss_pred HHHHhCChHHHHHHHHHHHHHHHhhCCCCCCCccCCCCC
Confidence 445689999999999999999888888999998765443
No 48
>KOG2787|consensus
Probab=38.26 E-value=25 Score=33.86 Aligned_cols=26 Identities=38% Similarity=0.585 Sum_probs=24.9
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhc
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLP 45 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~ 45 (297)
+||-|-||+|..+|.+|+.+|+.|+.
T Consensus 335 FLsLyRLT~d~kYlyRA~kFae~lld 360 (403)
T KOG2787|consen 335 FLSLYRLTGDMKYLYRAKKFAEWLLD 360 (403)
T ss_pred hHhHHHHcCcHHHHHHHHHHHHHHHh
Confidence 79999999999999999999999985
No 49
>cd04793 LanC LanC is the cyclase enzyme of the lanthionine synthetase. Lanthinoine is a lantibiotic, a unique class of peptide antibiotics. They are ribosomally synthesized as precursor peptides and then post-translationally modified to contain thioether cross-links called lanthionines (Lans) or methyllanthionines (MeLans) in addition to 2,3-didehydroalanine (Dha) and (Z)-2,3-didehydrobutyrine (Dhb). These unusual amino acids are introduced by the dehydration of serine and threonine residues, followed by thioether formation via addition of cysteine thiols, catalysed by LanB and LanC or LanM. LanC, the cyclase component, is a zinc metalloprotein, whose bound metal has been proposed to activate the thiol substrate for nucleophilic addition.
Probab=37.38 E-value=52 Score=31.49 Aligned_cols=76 Identities=16% Similarity=0.051 Sum_probs=50.2
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI 99 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~ 99 (297)
|+.++...+|+.+++.|.++.+.+........ + ...+++ |-.-+|- ..-|.++.+.|+|+.
T Consensus 253 l~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~-----------~-~~~~~l------ChG~~G~-~~~l~~~~~~~~~~~ 313 (382)
T cd04793 253 LQLAGKALDDQKLQEAAEKILKAALKDKKQLS-----------K-LISPTL------CHGLAGL-LFIFYLLYKDTNTNE 313 (382)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHhChhhhc-----------c-CCCCCc------CccHHHH-HHHHHHHHHHhCCcH
Confidence 55677888999999999999888775432110 0 011111 2223332 245678999999999
Q ss_pred hHHHHHHHHHHHHhc
Q psy7224 100 YREKVEKIRSVISSI 114 (297)
Q Consensus 100 y~~~a~~~~~~l~~~ 114 (297)
|.+.|.+..+.+.+.
T Consensus 314 ~~~~a~~~~~~~l~~ 328 (382)
T cd04793 314 FKSALEYLLNQIISS 328 (382)
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999987766543
No 50
>KOG2787|consensus
Probab=35.22 E-value=67 Score=31.01 Aligned_cols=72 Identities=18% Similarity=0.261 Sum_probs=48.3
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI 99 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~ 99 (297)
|.=||..=+++.||+.|.+.||.+-. .|+--.-+-+..|.+ -.---|..|=++|||++
T Consensus 289 L~kAy~VF~Eekyl~aa~ecadvVW~-----rGlLkkg~GichGva-----------------GNaYvFLsLyRLT~d~k 346 (403)
T KOG2787|consen 289 LAKAYQVFKEEKYLEAAMECADVVWK-----RGLLKKGVGICHGVA-----------------GNAYVFLSLYRLTGDMK 346 (403)
T ss_pred HHHHHHHhhHHHHHHHHHHHHHHHHH-----hhhhhcCCccccccc-----------------CchhhhHhHHHHcCcHH
Confidence 44577777788899999999998753 333111111112221 11224788999999999
Q ss_pred hHHHHHHHHHHHHh
Q psy7224 100 YREKVEKIRSVISS 113 (297)
Q Consensus 100 y~~~a~~~~~~l~~ 113 (297)
|...|.+..+.+-+
T Consensus 347 YlyRA~kFae~lld 360 (403)
T KOG2787|consen 347 YLYRAKKFAEWLLD 360 (403)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999998887765
No 51
>PF12060 DUF3541: Domain of unknown function (DUF3541); InterPro: IPR021928 This presumed domain is functionally uncharacterised. This domain is found in bacteria. This domain is about 230 amino acids in length.
Probab=28.53 E-value=22 Score=31.98 Aligned_cols=15 Identities=47% Similarity=0.922 Sum_probs=14.1
Q ss_pred hhhhcCCCCchhhhH
Q psy7224 199 LWRVTKDPKYREWGW 213 (297)
Q Consensus 199 l~r~T~d~~yre~~w 213 (297)
|||.|+|++|.-..|
T Consensus 36 mYRqT~d~kYaaa~~ 50 (227)
T PF12060_consen 36 MYRQTGDPKYAAAVW 50 (227)
T ss_pred HHHHhccHHHHHHHH
Confidence 799999999999888
No 52
>PF13204 DUF4038: Protein of unknown function (DUF4038); PDB: 3KZS_D.
Probab=28.19 E-value=17 Score=34.04 Aligned_cols=64 Identities=19% Similarity=0.381 Sum_probs=35.6
Q ss_pred ChhhHHHHHHHHHHHHhcCCCCCCCCcc-ccCCCCccccceeeecC-CchhHHHHHHHH--------HHhhCCC
Q psy7224 97 NPIYREKVEKIRSVISSIEKPNGLYPNY-LNPKTGHWGQSHISMGA-LGDSFYEYLLKA--------WIQSNKE 160 (297)
Q Consensus 97 d~~y~~~a~~~~~~l~~~~~~~gL~p~~-i~~~~g~~~~~~~~~Ga-~~DS~yEYLlK~--------~~l~g~~ 160 (297)
||.|++.++++.+.+.++.-..+|+|.. .+...+.|....-.++. ....|.+||++. |++.|+.
T Consensus 83 N~~YF~~~d~~i~~a~~~Gi~~~lv~~wg~~~~~~~Wg~~~~~m~~e~~~~Y~~yv~~Ry~~~~NviW~l~gd~ 156 (289)
T PF13204_consen 83 NPAYFDHLDRRIEKANELGIEAALVPFWGCPYVPGTWGFGPNIMPPENAERYGRYVVARYGAYPNVIWILGGDY 156 (289)
T ss_dssp ---HHHHHHHHHHHHHHTT-EEEEESS-HHHHH-------TTSS-HHHHHHHHHHHHHHHTT-SSEEEEEESSS
T ss_pred CHHHHHHHHHHHHHHHHCCCeEEEEEEECCccccccccccccCCCHHHHHHHHHHHHHHHhcCCCCEEEecCcc
Confidence 6999999999999999866666677766 22333445432222332 345788999987 4566666
No 53
>COG4403 LcnDR2 Lantibiotic modifying enzyme [Defense mechanisms]
Probab=27.32 E-value=1.2e+02 Score=33.13 Aligned_cols=38 Identities=34% Similarity=0.394 Sum_probs=30.1
Q ss_pred ceeehhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCCC
Q psy7224 84 LHLEFVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLYP 122 (297)
Q Consensus 84 ~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p 122 (297)
..|=|.+|..+||...|.+.|.++.+.+.+.- .+.+.|
T Consensus 652 I~LF~ayL~~vtgk~~Y~~ia~~~L~~~~~sv-~~~~~~ 689 (963)
T COG4403 652 IALFFAYLALVTGKDYYKEIAIKALQDSRKSV-NNNLNP 689 (963)
T ss_pred HHHHHHHHHHhcChHHHHHHHHHHHHHHHHhh-hhccCC
Confidence 56779999999999999999999988776632 225555
No 54
>PF05426 Alginate_lyase: Alginate lyase; InterPro: IPR008397 Alginate is a family of 1-4-linked copolymers of beta-D-mannuronic acid (M) and alpha-L-guluronic acid (G). It is produced by brown algae and by some bacteria belonging to the genera Azotobacter and Pseudomonas. Alginate lyases catalyse the depolymerisation of alginates by beta -elimination, generating a molecule containing 4-deoxy-L-erythro-hex-4-enepyranosyluronate at the nonreducing end []. Two subfamilies of alginate lyase exist: the poly(beta-D-mannuronate) lyase, 4.2.2.3 from EC, and the poly(alpha-L-guluronate) lyase, 4.2.2.11 from EC. This entry represents a domain found in the former.; GO: 0045135 poly(beta-D-mannuronate) lyase activity, 0042122 alginic acid catabolic process, 0042597 periplasmic space; PDB: 4E1Y_A 4E25_A 4E23_B 1QAZ_A 1HV6_A 3NFV_A 3NNB_A.
Probab=27.14 E-value=28 Score=31.58 Aligned_cols=27 Identities=15% Similarity=0.161 Sum_probs=19.8
Q ss_pred hhhhhhhcCCCCchhhhHHHHHHHHHh
Q psy7224 196 YFYLWRVTKDPKYREWGWDYVQMMKHA 222 (297)
Q Consensus 196 ~fyl~r~T~d~~yre~~w~i~~a~~~~ 222 (297)
+-.+|.+|||++|.+++-++..+.-..
T Consensus 65 lAlay~~Tgd~~YA~~a~~iL~~W~~~ 91 (272)
T PF05426_consen 65 LALAYYLTGDEKYADKAAEILNAWALN 91 (272)
T ss_dssp HHHHHHHH--HHHHHHHHHHHHHHHCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHcc
Confidence 446799999999999998887776443
No 55
>PF01270 Glyco_hydro_8: Glycosyl hydrolases family 8; InterPro: IPR002037 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 8 GH8 from CAZY comprises enzymes with several known activities; endoglucanase (3.2.1.4 from EC); lichenase (3.2.1.73 from EC); chitosanase (3.2.1.132 from EC). These enzymes were formerly known as cellulase family D []. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1IS9_A 1CEM_A 1KWF_A 1V5D_B 1V5C_A 1WU4_A 2DRS_A 1WU6_A 2DRO_A 1WU5_A ....
Probab=22.93 E-value=1e+02 Score=29.41 Aligned_cols=105 Identities=18% Similarity=0.203 Sum_probs=58.4
Q ss_pred hhhhhhhhhhhccCC--CchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCC--cceecccccceeehh
Q psy7224 14 IRFIGAILTLYSFTG--DPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGS--ASILSELGTLHLEFV 89 (297)
Q Consensus 14 IR~LGGLLSAy~Ls~--d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~--~~~lAe~gs~~LEf~ 89 (297)
+.+-=+||=|...=+ ...++..|+.+...++..-.. .| .--+..|.. +..... .++++-.- .==|.
T Consensus 116 l~iA~ALl~A~~~Wg~~~~~y~~~A~~~~~~i~~~~v~-~g----~~~llpG~~---~f~~~~~~~~npSY~~--~pa~~ 185 (342)
T PF01270_consen 116 LDIAYALLLAARRWGDGAYNYLAEALAIINAIKTHEVN-PG----RYVLLPGDW---GFNSDDYWTTNPSYFM--PPAFR 185 (342)
T ss_dssp HHHHHHHHHHHHHHTSSSSHHHHHHHHHHHHHHHHHEE-TT----EEEECSSSS---SCBTTSEEEEEGGGS---HHHHH
T ss_pred HHHHHHHHHHHhhcCCcchhHHHHHHHHHHHHHhheeC-CC----ceEEecccc---ccCCCCceEeChhhcc--HHHHH
Confidence 444555666655545 446788888887776542222 23 011111110 110000 11122111 01366
Q ss_pred hhHhhhCChhhHHHHHHHHHHHHhc-CCCCCCCCccccCC
Q psy7224 90 YLSDVTGNPIYREKVEKIRSVISSI-EKPNGLYPNYLNPK 128 (297)
Q Consensus 90 ~LS~lTgd~~y~~~a~~~~~~l~~~-~~~~gL~p~~i~~~ 128 (297)
.+.+.++|+.+.+.+++.++.|.+. ....||.|..+...
T Consensus 186 ~f~~~~~~~~W~~v~~~~~~ll~~~~~~~tGL~PDw~~~~ 225 (342)
T PF01270_consen 186 AFAAATGDPRWNEVADSSYALLQKASFPKTGLPPDWVVYD 225 (342)
T ss_dssp HHHHHHCCTHHHHHHHHHHHHHHHHHTTTTTB--SSEETT
T ss_pred HHHHhcCChhHHHHHHHHHHHHHHhcccCCCCCchheeec
Confidence 7889999999999999999988775 45689999988766
No 56
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=20.99 E-value=1.1e+02 Score=31.78 Aligned_cols=36 Identities=25% Similarity=0.347 Sum_probs=29.0
Q ss_pred hhHHHHHHHHHHHHhcCCCCCCCCccccCCCCcccc
Q psy7224 99 IYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQ 134 (297)
Q Consensus 99 ~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~ 134 (297)
.|.+.|.+.++.+.+.....||+|..+|+.+|...+
T Consensus 560 ~~~~~A~~ll~~~~~~~~~~Gll~Eqvd~~~g~~~g 595 (616)
T TIGR01577 560 IYLQKSKKLLKWVMDHRTDLGLLPEQVDKETGKPAW 595 (616)
T ss_pred hHHHHHHHHHHHHHhcCCCCCCCccccCCCCCCCCC
Confidence 456677788887777777899999999999987653
Done!