Query psy7224
Match_columns 297
No_of_seqs 171 out of 1393
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 21:17:02 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7224.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7224hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1nxc_A Mannosyl-oligosaccharid 100.0 1.2E-90 4.1E-95 681.5 14.4 276 2-285 96-459 (478)
2 1x9d_A Endoplasmic reticulum m 100.0 6.8E-89 2.3E-93 674.5 15.0 274 2-285 160-528 (538)
3 2ri9_A Mannosyl-oligosaccharid 100.0 1E-87 3.5E-92 660.8 15.3 270 4-286 80-468 (475)
4 1hcu_A Alpha-1,2-mannosidase; 100.0 1.1E-87 3.7E-92 664.1 13.5 270 4-285 93-486 (503)
5 1dl2_A Class I alpha-1,2-manno 100.0 3.3E-87 1.1E-91 661.2 9.1 273 2-285 90-488 (511)
6 1nxc_A Mannosyl-oligosaccharid 99.6 6E-17 2E-21 159.0 0.2 90 205-296 14-104 (478)
7 1dl2_A Class I alpha-1,2-manno 99.5 5.1E-16 1.7E-20 153.4 1.0 87 209-296 3-98 (511)
8 1hcu_A Alpha-1,2-mannosidase; 99.5 9.8E-16 3.3E-20 151.3 2.8 89 203-296 7-99 (503)
9 2ri9_A Mannosyl-oligosaccharid 99.5 1.3E-15 4.4E-20 149.5 1.8 83 209-296 3-86 (475)
10 1x9d_A Endoplasmic reticulum m 99.5 1.6E-15 5.5E-20 150.3 1.5 86 206-296 83-168 (538)
11 2gz6_A N-acetyl-D-glucosamine 97.9 1.1E-05 3.6E-10 76.0 6.1 201 12-225 116-342 (388)
12 3k7x_A LIN0763 protein; Q92DQ0 97.8 1.7E-05 5.8E-10 74.8 4.6 147 19-224 100-250 (349)
13 3gt5_A N-acetylglucosamine 2-e 97.6 0.00012 4.2E-09 69.7 7.5 206 16-237 118-359 (402)
14 2zbl_A Putative isomerase; N-a 97.4 0.00028 9.6E-09 67.6 8.3 212 14-237 114-365 (421)
15 3pmm_A Putative cytoplasmic pr 97.2 0.0011 3.7E-08 63.1 8.9 174 15-265 72-249 (382)
16 1nc5_A Hypothetical protein YT 97.1 0.0014 4.9E-08 61.8 9.1 177 15-265 45-229 (373)
17 3gt5_A N-acetylglucosamine 2-e 97.0 0.0014 4.8E-08 62.3 8.3 204 13-230 54-293 (402)
18 2zzr_A Unsaturated glucuronyl 97.0 0.0012 4.2E-08 63.2 7.5 159 19-225 122-284 (397)
19 2ahf_A Unsaturated glucuronyl 96.9 0.0047 1.6E-07 58.7 10.2 162 18-225 95-259 (377)
20 2gz6_A N-acetyl-D-glucosamine 96.5 0.0055 1.9E-07 57.3 7.5 104 12-122 54-159 (388)
21 1nc5_A Hypothetical protein YT 96.3 0.003 1E-07 59.6 4.9 98 18-128 94-194 (373)
22 3pmm_A Putative cytoplasmic pr 96.0 0.0074 2.5E-07 57.3 5.7 104 15-128 114-221 (382)
23 2ahf_A Unsaturated glucuronyl 95.7 0.0084 2.9E-07 56.9 4.8 89 17-114 227-320 (377)
24 3k11_A Putative glycosyl hydro 95.7 0.0079 2.7E-07 58.4 4.7 181 16-265 87-282 (445)
25 2zzr_A Unsaturated glucuronyl 95.5 0.014 4.8E-07 55.8 5.6 89 17-114 252-345 (397)
26 2v8i_A Pectate lyase; periplas 91.6 0.33 1.1E-05 47.1 6.8 189 32-222 2-235 (543)
27 3k11_A Putative glycosyl hydro 91.1 0.17 5.7E-06 49.0 4.3 98 17-127 151-254 (445)
28 2zbl_A Putative isomerase; N-a 89.4 0.9 3.1E-05 43.0 7.9 153 12-225 52-210 (421)
29 1fp3_A N-acyl-D-glucosamine 2- 87.7 1.4 4.8E-05 41.0 7.9 102 20-128 256-365 (402)
30 3k7x_A LIN0763 protein; Q92DQ0 86.6 0.36 1.2E-05 45.0 3.0 102 12-120 151-254 (349)
31 1fp3_A N-acyl-D-glucosamine 2- 74.8 3.2 0.00011 38.6 5.0 101 13-121 58-166 (402)
32 2v8i_A Pectate lyase; periplas 62.2 7.7 0.00026 37.7 4.7 99 7-121 369-468 (543)
33 2b4j_C PC4 and SFRS1 interacti 56.7 4.7 0.00016 30.8 1.7 49 189-237 49-97 (98)
34 3e6u_A LANC-like protein 1; al 50.4 24 0.00083 33.1 6.1 83 20-113 240-323 (411)
35 3e6u_A LANC-like protein 1; al 44.4 13 0.00045 34.9 3.1 36 19-54 343-378 (411)
36 1z9e_A PC4 and SFRS1 interacti 44.1 17 0.00057 29.0 3.2 49 190-238 50-98 (127)
37 2g0d_A Nisin biosynthesis prot 43.0 22 0.00077 32.8 4.5 79 29-114 225-314 (409)
38 2g0d_A Nisin biosynthesis prot 42.0 20 0.0007 33.1 4.0 65 20-106 288-352 (409)
39 1kwf_A Endoglucanase A; hydrol 40.4 75 0.0026 29.4 7.6 109 8-128 117-232 (363)
40 3eu8_A Putative glucoamylase; 37.8 58 0.002 31.1 6.4 95 29-132 18-120 (430)
41 3h7l_A Endoglucanase; dehydrog 37.7 36 0.0012 33.9 5.2 84 17-109 309-393 (586)
42 1r76_A Pectate lyase; A-helica 36.3 1.1E+02 0.0036 29.1 7.9 53 85-139 152-210 (408)
43 1wzz_A Probable endoglucanase; 35.1 45 0.0015 30.5 5.1 112 9-127 104-217 (334)
44 1v5d_A Chitosanase; chitosan d 32.6 93 0.0032 29.0 6.9 107 10-127 134-248 (386)
45 1ks8_A Endo-B-1,4-glucanase; c 31.9 28 0.00096 33.1 3.2 73 25-113 266-340 (433)
46 3nnb_A Alginate lyase; structu 31.7 17 0.00057 34.3 1.6 59 48-110 75-133 (382)
47 1wu4_A Xylanase Y; (alpla/alph 29.8 1.6E+02 0.0055 27.5 8.1 115 8-132 125-251 (396)
48 1gxm_A Pectate lyase; mechanis 26.1 50 0.0017 30.5 3.7 101 31-139 23-132 (332)
49 3ren_A Glycosyl hydrolase, fam 22.5 40 0.0014 31.3 2.3 67 192-268 119-185 (350)
50 3h7l_A Endoglucanase; dehydrog 21.7 46 0.0016 33.1 2.7 38 198-235 314-353 (586)
No 1
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=100.00 E-value=1.2e-90 Score=681.53 Aligned_cols=276 Identities=49% Similarity=0.933 Sum_probs=256.6
Q ss_pred CcCcccCccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceeccc
Q psy7224 2 KQKIELSVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSEL 81 (297)
Q Consensus 2 ~~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~ 81 (297)
+++..|||||||||+||||||||+||+|++||+||+||||+|+||||||||||+++||+++|...+++|...+++++||+
T Consensus 96 ~~~~~vsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLad~LlpAFdTptgiP~~~vnl~~g~~~~~~~~~~~~s~lAe~ 175 (478)
T 1nxc_A 96 NVNAEVSVFEVNIRFVGGLLSAYYLSGEEIFRKKAVELGVKLLPAFHTPSGIPWALLNMKSGIGRNWPWASGGSSILAEF 175 (478)
T ss_dssp CCSSEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSSSSCCCSEEETTTCCEECCTTSGGGCEEHHHH
T ss_pred cCCCccchhheehhhhhhhhhhhhccCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccccCCCCcccCCCCcccccc
Confidence 35789999999999999999999999999999999999999999999999999999999999887777765567899999
Q ss_pred ccceeehhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCC
Q psy7224 82 GTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKED 161 (297)
Q Consensus 82 gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~ 161 (297)
||++|||++||++||||+|+++|++++++|++.++.+||+|+.||+.+|+|.+..+++||++|||||||+|+|+|+|+++
T Consensus 176 gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~YEYLlK~~il~g~~d 255 (478)
T 1nxc_A 176 GTLHLEFMHLSHLSGDPVFAEKVMKIRTVLNKLDKPEGLYPNYLNPSSGQWGQHHVSVGGLGDSFYEYLLKAWLMSDKTD 255 (478)
T ss_dssp TTCHHHHHHHHHHHCCTHHHHHHHHHHHHHHHSCCGGGCCCSEECTTTCCBCSCEECSSTTTHHHHHHHHHHHHHTTTCC
T ss_pred cchhhhHHHHHHHHCChHHHHHHHHHHHHHHhcCCCCCccccccCCCCCCccCceeeecCCCchHHHHHHHHHHHcCCch
Confidence 99999999999999999999999999999999888899999999999999999999999999999999999999999775
Q ss_pred CC------------------------------------------------------------------------------
Q psy7224 162 TE------------------------------------------------------------------------------ 163 (297)
Q Consensus 162 ~~------------------------------------------------------------------------------ 163 (297)
..
T Consensus 256 ~~~~~m~~~a~~~i~~~l~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~gG~~aLg~~~~~~~~~~~~l~~a~~l~~tC~~ 335 (478)
T 1nxc_A 256 LEAKKMYFDAVQAIETHLIRKSSGGLTYIAEWKGGLLEHKMGHLTCFAGGMFALGADGAPEARAQHYLELGAEIARTCHE 335 (478)
T ss_dssp HHHHHHHHHHHHHHHHHTEEECTTSCEEECEEETTEEECEEETGGGGHHHHHHHTSTTSCTTCHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcEEEEeccCCcccccccchhhhhHHHHHhccccccccchHHHHHHHHHHHHHHHH
Confidence 42
Q ss_pred ---------CCccccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccc
Q psy7224 164 ---------GPESFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKN 234 (297)
Q Consensus 164 ---------~PE~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~D 234 (297)
+||+|.|..+.+...++..+++|+||||+|||+|||||+||||+||+|||+||++|+++||+.+|||++.|
T Consensus 336 ~y~~~~tgl~PE~~~~~~~~~~~~~~~~~~~y~LRPE~iES~fylyR~TgD~~yre~gw~~f~ai~k~~r~~~G~a~i~d 415 (478)
T 1nxc_A 336 SYNRTYVKLGPEAFRFDGGVEAIATRQNEKYYILRPEVIETYMYMWRLTHDPKYRTWAWEAVEALESHCRVNGGYSGLRD 415 (478)
T ss_dssp HHHTSSSSSCCSEEESSTTCSSBCCSGGGCCBCSCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHTEETTEECCBSC
T ss_pred HHHhcccCCCCeEEEeccCcccccccccccccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcccccccccc
Confidence 68888887665444456678899999999999999999999999999999999999999999999999999
Q ss_pred cccCC-CCCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccccccccccc
Q psy7224 235 ELKPL-SRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESL 285 (297)
Q Consensus 235 v~~p~-s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~ 285 (297)
|..+. .+.|+||||| |+||||||||+|++++++++++|||||.
T Consensus 416 V~~~~~~~~D~meSF~--------laETLKYlYLLFsd~~~i~ld~~VFnTE 459 (478)
T 1nxc_A 416 VYIARESYDDVQQSFF--------LAETLKYLYLIFSDDDLLPLEHWIFNTE 459 (478)
T ss_dssp TTSSSCCBCCCBCHHH--------HHTHHHHHHHHTSCTTSSCTTTEEECTT
T ss_pred cCCCCCCcCCCCCchH--------HHHHHHHHHeeccCCccCCCCCeeecCC
Confidence 99754 4459999999 9999999999999999999999999997
No 2
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=100.00 E-value=6.8e-89 Score=674.47 Aligned_cols=274 Identities=34% Similarity=0.629 Sum_probs=252.9
Q ss_pred CcCcccCccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceeccc
Q psy7224 2 KQKIELSVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSEL 81 (297)
Q Consensus 2 ~~~~~vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~ 81 (297)
+++..|||||||||+||||||||+||+|++||+||+||||+|+||||||||||+++||+++|...+++|. +.+++||+
T Consensus 160 ~~d~~VsvFETtIR~LGGLLSAy~Lsgd~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~g~~~~~~~~--~~s~lAe~ 237 (538)
T 1x9d_A 160 EKDVDVNLFESTIRILGGLLSAYHLSGDSLFLRKAEDFGNRLMPAFRTPSKIPYSDVNIGTGVAHPPRWT--SDSTVAEV 237 (538)
T ss_dssp CSSCEEEHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHGGGGCSTTSCCCSEEETTTCCEECCTTC--SEEEHHHH
T ss_pred CCCceeehhheehhhhhhhhhHHHhcCCHHHHHHHHHHHHHHHHhhcCCCCCCcceeeecccccCCCCcC--CCceeccc
Confidence 4578999999999999999999999999999999999999999999999999999999999987766664 45899999
Q ss_pred ccceeehhhhHhhhCChhhHHHHHHHHHHHHhcC-CCCCCCCccccCCCCccccc-eeeecCCchhHHHHHHHHHHhhCC
Q psy7224 82 GTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIE-KPNGLYPNYLNPKTGHWGQS-HISMGALGDSFYEYLLKAWIQSNK 159 (297)
Q Consensus 82 gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~-~~~gL~p~~i~~~~g~~~~~-~~~~Ga~~DS~yEYLlK~~~l~g~ 159 (297)
||++|||++||++||||+|+++|+++++.|++.+ +.+||+|+.||+.+|+|... .+++||++|||||||+|+|+|+|+
T Consensus 238 GSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~GL~p~~i~~~tG~~~~~~~~~lGa~~DS~YEYLlK~~il~g~ 317 (538)
T 1x9d_A 238 TSIQLEFRELSRLTGDKKFQEAVEKVTQHIHGLSGKKDGLVPMFINTHSGLFTHLGVFTLGARADSYYEYLLKQWIQGGK 317 (538)
T ss_dssp HSSHHHHHHHHHHHCCTHHHHHHHHHHHHHHTCSCCBTTBCCSEEETTTCCEESTTEECSSTTTHHHHHHHHHHHHHTTS
T ss_pred cceeeeHHHHHHHhCCcHHHHHHHHHHHHHHhcccCCCCCcceEEeCCCCCccCCcceeecCCccHHHHHHHHHHHHcCC
Confidence 9999999999999999999999999999999988 89999999999999999998 999999999999999999999997
Q ss_pred CCCC----------------------------------------------------------------------------
Q psy7224 160 EDTE---------------------------------------------------------------------------- 163 (297)
Q Consensus 160 ~~~~---------------------------------------------------------------------------- 163 (297)
++..
T Consensus 318 ~d~~y~~my~~a~~~i~~~L~~~~~~~~~~~v~~~~~g~~~~~~~hL~cF~gG~~aLgg~~~~~~~~l~~a~~L~~tC~~ 397 (538)
T 1x9d_A 318 QETQLLEDYVEAIEGVRTHLLRHSEPSKLTFVGELAHGRFSAKMDHLVCFLPGTLALGVYHGLPASHMELAQELMETCYQ 397 (538)
T ss_dssp CCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECEEETTEEECEEEGGGGHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHhccCCCCCCceEEEeccCCccCcccchHhhhhhhHHHhcCcccCcHHHHHHHHHHHHHHHH
Confidence 6532
Q ss_pred ---------CCccccccchh----hhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccc-c
Q psy7224 164 ---------GPESFKFTDTL----EAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVT-Y 229 (297)
Q Consensus 164 ---------~PE~~~~~~~~----~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~g-y 229 (297)
+||+|.|..+. +...++..+++|+||||+|||+|||||+|||++||+|||+||++|+++||+.+| |
T Consensus 398 ~Y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~y~LRPE~IES~fylyR~TgD~~yre~gw~~f~ai~k~~rt~~Ggy 477 (538)
T 1x9d_A 398 MNRQMETGLSPEIVHFNLYPQPGRRDVEVKPADRHNLLRPETVESLFYLYRVTGDRKYQDWGWEILQSFSRFTRVPSGGY 477 (538)
T ss_dssp HHHTSTTSCCCSEEECCSSCCTTCCSCBCCGGGCCBCCCCHHHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTBCTTSCB
T ss_pred HHHhcccCCCceEEEeccCCCccccceeeeccCcccCCChHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccccCCc
Confidence 79998887642 222345677899999999999999999999999999999999999999999999 9
Q ss_pred ccccccccC--CCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcc-ccccccccccccc
Q psy7224 230 AWGKNELKP--LSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTD-EYEDGKKWVAESL 285 (297)
Q Consensus 230 a~~~Dv~~p--~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~-e~~~~~~~V~nt~ 285 (297)
|++.||..| ....|+||||| |+||||||||||+++ +++++++|||||.
T Consensus 478 a~i~dV~~~~~~~~~D~mESFf--------LAETLKYlYLLFsd~~~~i~Ld~~VFNTE 528 (538)
T 1x9d_A 478 SSINNVQDPQKPEPRDKMESFF--------LGETLKYLFLLFSDDPNLLSLDAYVFNTE 528 (538)
T ss_dssp CCBSCTTCSSCCCBCSCBCHHH--------HHTHHHHHHHHHCCC-CCSCTTTEEECTT
T ss_pred cccccccCCCCCCcCCCcccHH--------HHHHHHHHHHhcCCCCCcCcCCCeeecCC
Confidence 999999973 34459999999 999999999999999 9999999999996
No 3
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=100.00 E-value=1e-87 Score=660.76 Aligned_cols=270 Identities=28% Similarity=0.441 Sum_probs=244.8
Q ss_pred CcccCccchhhhhhhhhhhhhccC-CC-----------chHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcC
Q psy7224 4 KIELSVFETTIRFIGAILTLYSFT-GD-----------PMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWA 71 (297)
Q Consensus 4 ~~~vsvFEttIR~LGGLLSAy~Ls-~d-----------~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~ 71 (297)
+..|||||||||+||||||||+|| ++ ++||+||+||||+|+||||||||||+++||++++.. +.
T Consensus 80 ~~~vsvFETtIR~LGGLLSAy~Ls~g~~~~~~~~~~~~~~lL~kA~dLadrLlpAF~TptgiP~~~vnl~~~~~----~~ 155 (475)
T 2ri9_A 80 SDTVSLFETTIRYLAGMLSGYDLLQGPAKNLVDNQDLIDGLLDQSRNLADVLKFAFDTPSGVPYNNINITSHGN----DG 155 (475)
T ss_dssp SSCEEHHHHHHHHHHHHHHHHHHHHTTTTTSCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEECTTTCCB----CC
T ss_pred CCccchhheehHhHhHHhHHHHhccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCCceeecccCCC----cC
Confidence 789999999999999999999999 77 799999999999999999999999999999998643 22
Q ss_pred CCCcceecccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcC-----CCCCCCCccccCCCCccccceeeecCCchhH
Q psy7224 72 SGSASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIE-----KPNGLYPNYLNPKTGHWGQSHISMGALGDSF 146 (297)
Q Consensus 72 ~~~~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~-----~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~ 146 (297)
..++++||+||++|||++||++||||+|+++|+++++.|++.+ +.+||+|+.||+.+|+|.+..+++||++|||
T Consensus 156 -~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~ 234 (475)
T 2ri9_A 156 -ATTNGLAVTGTLVLEWTRLSDLTGDEEYAKLSQKAESYLLKPQPSSSEPFPGLVGSSININDGQFADSRVSWNGGDDSF 234 (475)
T ss_dssp -CSEEEHHHHHSCHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCSSGGGCSBTTBCCSEEETTTCCBCCCCBCSSTTTHHH
T ss_pred -CCccchhccccceeeHHHHHHHhCCHHHHHHHHHHHHHHHhhccccccCCCCCcceEEeCCCCcccCCceeecCCcchH
Confidence 3568999999999999999999999999999999999999865 4799999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCCCC---------------------------------------------------------------
Q psy7224 147 YEYLLKAWIQSNKEDTE--------------------------------------------------------------- 163 (297)
Q Consensus 147 yEYLlK~~~l~g~~~~~--------------------------------------------------------------- 163 (297)
||||+|+|+|+|+.+..
T Consensus 235 YEYLlK~~il~g~~~~~~~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~ 314 (475)
T 2ri9_A 235 YEYLIKMYVYDPKRFETYKDRWVLAAESTIKHLKSHPKSRPDLTFLSSYSNRNYDLSSQHLTCFDGGSFLLGGTVLDRQD 314 (475)
T ss_dssp HHHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECCSSCTTCCEECEEETTEEECEEETGGGGHHHHHHHHHHHHTCHH
T ss_pred HHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchHHHhHHHHHHhcccccccHH
Confidence 99999999999987431
Q ss_pred -----------------------CCccccccchhhh---------hhhcccccccCCChhhhhhhhhhhhhcCCCCchhh
Q psy7224 164 -----------------------GPESFKFTDTLEA---------KAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREW 211 (297)
Q Consensus 164 -----------------------~PE~~~~~~~~~~---------~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~ 211 (297)
+||+|.|..+... ....+.+++|+||||+|||+|||||+||||+||+|
T Consensus 315 ~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~~yr~~ 394 (475)
T 2ri9_A 315 FIDFGLELVDGCEATYNSTLTKIGPDSWGWDPKKVPSDQKEFYEKAGFYISSGSYVLRPEVIESFYYAHRVTGKEIYRDW 394 (475)
T ss_dssp HHHHHHHHHHHHHHHHHTSSSSCCCSEEECCTTCCCGGGHHHHHHHSCEEEECCBCSCCHHHHHHHHHHHHHCCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccCCCCcEEEeecCcccccccccccCCCceecccccCCChHHHHHHHHHHHHhCCHHHHHH
Confidence 7888888765321 11234558899999999999999999999999999
Q ss_pred hHHHHHHHHHhhccccccccccccccCC-C-CCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccc-----ccccccc
Q psy7224 212 GWDYVQMMKHAWDNYVTYAWGKNELKPL-S-RRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDG-----KKWVAES 284 (297)
Q Consensus 212 ~w~i~~a~~~~~~~y~gya~~~Dv~~p~-s-~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~-----~~~V~nt 284 (297)
||+||++|+++||+.+|||++.||..+. + ..|+||||| |+||||||||||++++.+++ ++|||||
T Consensus 395 gw~~f~ai~k~~rt~~G~a~i~dV~~~~~~~~~D~meSF~--------laETLKYlYLLFsd~~~i~l~~~~~d~~VFNT 466 (475)
T 2ri9_A 395 VWNAFVAINSTCRTDSGFAAVSDVNKANGGSKYDNQESFL--------FAEVMKYSYLAHSEDAAWQVQKGGKNTFVYNT 466 (475)
T ss_dssp HHHHHHHHHHHTBCSSSBCCBSCTTSGGGSSBBSCCCTHH--------HHTHHHHHHHTTSCCCTTSCCSTTCCSEEECT
T ss_pred HHHHHHHHHHHHccccCCcccccccCCCCCCcCCccchHH--------HHHHHHHHHhcccCCcccccccCCCCCeEEcC
Confidence 9999999999999999999999999744 3 449999999 99999999999999999999 9999998
Q ss_pred cc
Q psy7224 285 LT 286 (297)
Q Consensus 285 ~~ 286 (297)
.-
T Consensus 467 EA 468 (475)
T 2ri9_A 467 EA 468 (475)
T ss_dssp TS
T ss_pred CC
Confidence 63
No 4
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=100.00 E-value=1.1e-87 Score=664.12 Aligned_cols=270 Identities=29% Similarity=0.488 Sum_probs=245.5
Q ss_pred CcccCccchhhhhhhhhhhhhccCCCc------------hHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcC
Q psy7224 4 KIELSVFETTIRFIGAILTLYSFTGDP------------MYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWA 71 (297)
Q Consensus 4 ~~~vsvFEttIR~LGGLLSAy~Ls~d~------------~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~ 71 (297)
+..|||||||||+||||||||+||+|+ +||+||+||||+|+||||||||||+++||+++|... +.
T Consensus 93 ~~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~~~~~~~~~~lL~kA~dLadrLlpAFdTptgiP~~~vnl~~~~~~---~~ 169 (503)
T 1hcu_A 93 NQGSSVFETNIRYLGGLLSAYDLLRGPFSSLATNQTLVNSLLRQAQTLANGLKVAFTTPSGVPDPTVFFNPTVRR---SG 169 (503)
T ss_dssp TCCEEHHHHHHHHHHHHHHHHHHHHTTTGGGCCCHHHHHHHHHHHHHHHHHHGGGGCSSSSCCCSEEECSSSCEE---CC
T ss_pred CCccchheeehhhHhHHHHHHHHccCccccccccccchHHHHHHHHHHHHHHHHhhcCCCCCCcceeecccCCCC---CC
Confidence 789999999999999999999999995 999999999999999999999999999999996532 22
Q ss_pred CCCcceecccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcCC----CCCCCCccccCCCCccccceeeecCCchhHH
Q psy7224 72 SGSASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIEK----PNGLYPNYLNPKTGHWGQSHISMGALGDSFY 147 (297)
Q Consensus 72 ~~~~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~----~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~y 147 (297)
..++++||+||++|||++||++||||+|+++|+++++.|++.+. .+||+|+.||+.+|+|.+..+++||++||||
T Consensus 170 -~~~~~~Ae~gsl~LEF~~LS~lTGd~~Y~~~a~~~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~~Ga~~DS~Y 248 (503)
T 1hcu_A 170 -ASSNNVAEIGSLVLEWTRLSDLTGNPQYAQLAQKGESYLLNPKGSPEAWPGLIGTFVSTSNGTFQDSSGSWSGLMDSFY 248 (503)
T ss_dssp -CSEEEHHHHTTSHHHHHHHHHHHSCTHHHHHHHHHHHHHHSCCBSCCSBTTBCCSEEETTTCCBCCCEECSSTTTHHHH
T ss_pred -CCccccccccceeeehHHHHHHhCChHHHHHHHHHHHHHHhhhcccCCCCCceeeEEeCCCCcccCCeeeecCCCccHH
Confidence 35689999999999999999999999999999999999998653 7999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCCCC----------------------------------------------------------------
Q psy7224 148 EYLLKAWIQSNKEDTE---------------------------------------------------------------- 163 (297)
Q Consensus 148 EYLlK~~~l~g~~~~~---------------------------------------------------------------- 163 (297)
|||+|+|+|+|+.+..
T Consensus 249 EYLlK~~il~g~~~~~y~~m~~~a~~~i~~~l~~~~~~~~~~~~v~~~~~~~~~~~~~hL~cF~~G~~aLgg~~~~~~~~ 328 (503)
T 1hcu_A 249 EYLIKMYLYDPVAFAHYKDRWVLGADSTIGHLGSHPSTRKDLTFLSSYNGQSTSPNSGHLASFGGGNFILGGILLNEQKY 328 (503)
T ss_dssp HHHHHHHHHCTTTTHHHHHHHHHHHHHHHHHTEECBTTCTTCCEECEEETTEEESEEEGGGGGHHHHHHHHHHHHTCHHH
T ss_pred HHHHHHHHHcCCchHHHHHHHHHHHHHHHHHhccCCCCCCCceEEEeccCCccccccchhhhhhhHHHHhcCcccccHHH
Confidence 9999999999987431
Q ss_pred ----------------------CCccccccchh------hh---------hhhcccccccCCChhhhhhhhhhhhhcCCC
Q psy7224 164 ----------------------GPESFKFTDTL------EA---------KAYRSQDKYYILRPEVIESYFYLWRVTKDP 206 (297)
Q Consensus 164 ----------------------~PE~~~~~~~~------~~---------~~~~~~~~~y~lRPE~iES~fyl~r~T~d~ 206 (297)
+||+|.|..+. .. ....+.+++|+||||+|||+|||||+||||
T Consensus 329 ~~~a~~L~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~y~LRPE~iES~fylyR~TgD~ 408 (503)
T 1hcu_A 329 IDFGIKLASSYFGTYTQTASGIGPEGFAWVDSVTGAGGSPPSSQSGFYSSAGFWVTAPYYILRPETLESLYYAYRVTGDS 408 (503)
T ss_dssp HHHHHHHHHHHHHHHHTSSSSCCCSEEECCBTTTCCSCCCCGGGHHHHHHHSCEEEECCBCCCCHHHHHHHHHHHHHCBH
T ss_pred HHHHHHHHHHHHHHHHhCccCCCceEEEeecCccccccCCcccccccccCCCceeccccccCChHHHHHHHHHHHHhCCH
Confidence 79999887653 11 112345588999999999999999999999
Q ss_pred CchhhhHHHHHHHHHhhccccccccccccccCC--CCCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccc-----cc
Q psy7224 207 KYREWGWDYVQMMKHAWDNYVTYAWGKNELKPL--SRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDG-----KK 279 (297)
Q Consensus 207 ~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~--s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~-----~~ 279 (297)
+||+|||+||++|+++||+.+|||++.||..+. ...|+||||| |+||||||||||++++.+++ ++
T Consensus 409 ~yre~gw~if~ai~k~~r~~~Gya~i~dV~~~~~~~~~D~meSF~--------laETLKYlYLLFsd~~~i~L~~~~~d~ 480 (503)
T 1hcu_A 409 KWQDLAWEALSAIEDACRAGSAYSSINDVTQANGGGASDDMESFW--------FAEALKYAYLIFAEESDVQVQATGGNK 480 (503)
T ss_dssp HHHHHHHHHHHHHHHHHEETTEECCBSCTTSTTCSCBCSCBCHHH--------HHTHHHHHHHHHSCCCSSSCCTTSCCC
T ss_pred HHHHHHHHHHHHHHHHHhhccCCcccccccCCCCCCcCCccchHH--------HHHHHHHHheeccCCcccccccCCCCC
Confidence 999999999999999999999999999999754 3459999999 99999999999999999999 99
Q ss_pred cccccc
Q psy7224 280 WVAESL 285 (297)
Q Consensus 280 ~V~nt~ 285 (297)
|||||.
T Consensus 481 ~VFNTE 486 (503)
T 1hcu_A 481 FVFNTE 486 (503)
T ss_dssp EEECTT
T ss_pred eEEcCC
Confidence 999997
No 5
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=100.00 E-value=3.3e-87 Score=661.22 Aligned_cols=273 Identities=33% Similarity=0.510 Sum_probs=246.0
Q ss_pred CcCcccCccchhhhhhhhhhhhhccC------CCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCC
Q psy7224 2 KQKIELSVFETTIRFIGAILTLYSFT------GDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGS 74 (297)
Q Consensus 2 ~~~~~vsvFEttIR~LGGLLSAy~Ls------~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~ 74 (297)
+++..|||||||||+||||||||+|| +|++||+||+||||+|+|||| ||||||+++||+++|......|. .+
T Consensus 90 ~~d~~VsvFETtIR~LGGLLSAy~Ls~~~~~~~d~~lL~kA~dLadrLlpAFd~TptgiP~~~vnl~~g~~~~~~~~-~~ 168 (511)
T 1dl2_A 90 DIDAEVNVFETTIRMLGGLLSAYHLSDVLEVGNKTVYLNKAIDLGDRLALAFLSTQTGIPYSSINLHSGQAVKNHAD-GG 168 (511)
T ss_dssp CCSSEEEHHHHHHHHHHHHHHHHHHHHHHTCSCHHHHHHHHHHHHHHHHGGGGSSSSSCCCSEEETTTCCEECCSSG-GG
T ss_pred CCCceechhheehhhhhhhhhHHHhcccccCCCcHHHHHHHHHHHHHHHHhhcCCCCCCCCceeecccCCCCCCCCC-Cc
Confidence 45789999999999999999999999 999999999999999999999 99999999999999987666665 46
Q ss_pred cceecccccceeehhhhHhhhCChhhHHHHHHHHHHHHhcC----CCCCCCCccccCCCCccccceeeecCCchhHHHHH
Q psy7224 75 ASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSVISSIE----KPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYL 150 (297)
Q Consensus 75 ~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~----~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYL 150 (297)
.+++||+||++|||++||++||||+|+++|+++++.|++.+ +.+||+|+.||+.+|+|.+..+++||++|||||||
T Consensus 169 ~s~~Ae~gSl~LEF~~LS~LTGd~~Y~~~a~r~~~~l~~~~~~~~~~~GL~p~~i~~~tg~~~~~~~~lGa~~DS~YEYL 248 (511)
T 1dl2_A 169 ASSTAEFTTLQMEFKYLAYLTGNRTYWELVERVYEPLYKNNDLLNTYDGLVPIYTFPDTGKFGASTIRFGSRGDSFYEYL 248 (511)
T ss_dssp CEEHHHHSSCHHHHHHHHHHHTCHHHHHHHHTTHHHHHHHHTHHHHHTTCCBSEECTTTCCBCSCCBCSSTTTHHHHHHH
T ss_pred ccccccccceeeeHHHHHHHHCChHHHHHHHHHHHHHHhcccccCCCCCCcceEEcCCCCCccCCeeeecCCCCcHHHHH
Confidence 78999999999999999999999999999999999999876 78999999999999999999999999999999999
Q ss_pred HHHHHhhCCCCCC-------------------------------------------------------------------
Q psy7224 151 LKAWIQSNKEDTE------------------------------------------------------------------- 163 (297)
Q Consensus 151 lK~~~l~g~~~~~------------------------------------------------------------------- 163 (297)
+|+|+|+++....
T Consensus 249 lK~~il~~d~~y~~m~~~a~~~i~~~L~~~~~~~~~~~~~~~~~~~~g~~~~~~~hL~cF~gG~~aLg~~~~~~~~~a~~ 328 (511)
T 1dl2_A 249 LKQYLLTHETLYYDLYRKSMEGMKKHLLAQSKPSSLWYIGEREQGLHGQLSPKMDHLVCFMGGLLASGSTEGLSIHEARR 328 (511)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHTEEECTTTCCEEECBBTTCTTSCCBCEEEGGGGGHHHHHHHHHHTTCCHHHHTT
T ss_pred HHHHHhcCCHHHHHHHHHHHHHHHHHhccCCCCCCcEEEEEeecCCCCccccccchhhhchhHHHHhccccCCChhhhhh
Confidence 9999997432100
Q ss_pred ------------------------------CCccccccchhh-----------hhhhcccccccCCChhhhhhhhhhhhh
Q psy7224 164 ------------------------------GPESFKFTDTLE-----------AKAYRSQDKYYILRPEVIESYFYLWRV 202 (297)
Q Consensus 164 ------------------------------~PE~~~~~~~~~-----------~~~~~~~~~~y~lRPE~iES~fyl~r~ 202 (297)
+||+|.|..+.. ...+++.+++|+||||+|||+|||||+
T Consensus 329 ~~~~~~~~~~~a~~l~~tC~~~y~~~~tGl~PE~~~~~~~~~~~~~~~~~~~~d~~~~~~d~~y~LRPE~iES~fylyR~ 408 (511)
T 1dl2_A 329 RPFFSKSDWDLAKGITDTCYQMYKQSSSGLAPEIVVFNDGNIKQDGWWRSSVGDFFVKPLDRHNLQRPETVESIMFMYHL 408 (511)
T ss_dssp STTCCHHHHHHHHHHHHHHHHHHHTSTTSCCCSEEEECCSCCC-CCCEECSSSSEEECGGGCCBCCCCHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHhcCccCCCceEEEeecCCccccccccccccceeeccCCcccCcCHHHHHHHHHHHHH
Confidence 567766654321 112345678999999999999999999
Q ss_pred cCCCCchhhhHHHHHHHHHhhccccc------cccccccccCC-CCCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccc
Q psy7224 203 TKDPKYREWGWDYVQMMKHAWDNYVT------YAWGKNELKPL-SRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYE 275 (297)
Q Consensus 203 T~d~~yre~~w~i~~a~~~~~~~y~g------ya~~~Dv~~p~-s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~ 275 (297)
||||+||+|||+||++|+++||+.+| ||++.||..+. ...|+||||| |+||||||||||++ .+
T Consensus 409 TgD~~yre~gw~~f~ai~k~~rt~~G~~~~~gya~i~dV~~~~~~~~D~mESF~--------laETLKYlYLLFsd--~i 478 (511)
T 1dl2_A 409 SHDHKYREWGAEIATSFFENTCVDCNDPKLRRFTSLSDCITLPTKKSNNMESFW--------LAETLKYLYILFLD--EF 478 (511)
T ss_dssp HCCTHHHHHHHHHHHHHHHHHEESTTCTTTCEECCEEESSSSSCEECSCCCHHH--------HHTHHHHHHHHTCS--CC
T ss_pred cCCHHHHHHHHHHHHHHHHHhccccCCccccccccccccccCCCCcCCCcchhh--------HHHHHHHHHHHccc--cc
Confidence 99999999999999999999999999 99999998754 4459999999 99999999999999 89
Q ss_pred cccccccccc
Q psy7224 276 DGKKWVAESL 285 (297)
Q Consensus 276 ~~~~~V~nt~ 285 (297)
++++|||||.
T Consensus 479 ~Ld~~VFNTE 488 (511)
T 1dl2_A 479 DLTKVVFNTE 488 (511)
T ss_dssp CTTSEEECTT
T ss_pred cCCceeecCC
Confidence 9999999997
No 6
>1nxc_A Mannosyl-oligosaccharide 1,2-alpha-mannosidase IA; glycosidase, structural genomics, PSI, protein initiative; HET: NAG BMA MAN; 1.51A {Mus musculus} SCOP: a.102.2.1
Probab=99.60 E-value=6e-17 Score=159.02 Aligned_cols=90 Identities=46% Similarity=0.887 Sum_probs=80.5
Q ss_pred CCCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcc-hhhHHhhhhHHHHhcCccccccccccccc
Q psy7224 205 DPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAEL-GMTIIDGLDTLYIMGLTDEYEDGKKWVAE 283 (297)
Q Consensus 205 d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~-~~tl~eTLkyLyLmf~~~e~~~~~~~V~n 283 (297)
++..++++.+|++||.|+|++|+.|||++|+++|.|+++...+.| +++ |+||||+||||+||++.+||.++++||.+
T Consensus 14 ~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEl~P~S~~g~~~~~f--g~~~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~~ 91 (478)
T 1nxc_A 14 DATIREKRAKIKEMMTHAWNNYKRYAWGLNELKPISKEGHSSSLF--GNIKGATIVDALDTLFIMGMKTEFQEAKSWIKK 91 (478)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTTSSEEETTTTEEECCGGG--TTCCCHHHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHHhcCCccccccccCCCcCCCcc--CCcccchheecccceeecCCHHHHHHHHHHHHh
Confidence 445678889999999999999999999999999999875432234 466 99999999999999999999999999999
Q ss_pred ccccCCCCccccc
Q psy7224 284 SLTLDDKTHKVVM 296 (297)
Q Consensus 284 t~~f~~~~~~~~~ 296 (297)
+++|+.+..||||
T Consensus 92 ~l~f~~~~~vsvF 104 (478)
T 1nxc_A 92 YLDFNVNAEVSVF 104 (478)
T ss_dssp HCCCCCSSEEEHH
T ss_pred hcCccCCCccchh
Confidence 9999999999998
No 7
>1dl2_A Class I alpha-1,2-mannosidase; alpha-alpha helix barrel, hydrolase; HET: NAG NDG BMA MAN; 1.54A {Saccharomyces cerevisiae} SCOP: a.102.2.1 PDB: 1g6i_A*
Probab=99.55 E-value=5.1e-16 Score=153.45 Aligned_cols=87 Identities=25% Similarity=0.509 Sum_probs=78.1
Q ss_pred hhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHh---------cCccccccccc
Q psy7224 209 REWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIM---------GLTDEYEDGKK 279 (297)
Q Consensus 209 re~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLm---------f~~~e~~~~~~ 279 (297)
.+++.+|++||.|+|++|+.|||++|+++|.|++++... |.+.+||+||||+||||+|| ++.+||.++++
T Consensus 3 ~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~~~~-~~g~g~G~TlVDSLDTL~IM~~~~~~~~~gl~~Ef~~A~~ 81 (511)
T 1dl2_A 3 GEMRDRIESMFLESWRDYSKHGWGYDVYGPIEHTSHNMP-RGNQPLGWIIVDSVDTLMLMYNSSTLYKSEFEAEIQRSEH 81 (511)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSTTCSEEETTTTEEECSS-TTCCCCCTTHHHHHHHHHHHHHHCSSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCcCCCC-ccCCccceeeeecccceEEeccccccccCCcHHHHHHHHH
Confidence 467889999999999999999999999999999855332 32227999999999999999 99999999999
Q ss_pred ccccccccCCCCccccc
Q psy7224 280 WVAESLTLDDKTHKVVM 296 (297)
Q Consensus 280 ~V~nt~~f~~~~~~~~~ 296 (297)
||.++++|++|..||||
T Consensus 82 ~V~~~l~F~~d~~VsvF 98 (511)
T 1dl2_A 82 WINDVLDFDIDAEVNVF 98 (511)
T ss_dssp HHHHTCCCCCSSEEEHH
T ss_pred HHHHhcCCCCCceechh
Confidence 99999999999999998
No 8
>1hcu_A Alpha-1,2-mannosidase; glycosylation, glycosyl hydrolase; HET: NAG; 2.37A {Trichoderma reesei} SCOP: a.102.2.1
Probab=99.55 E-value=9.8e-16 Score=151.26 Aligned_cols=89 Identities=20% Similarity=0.352 Sum_probs=80.7
Q ss_pred cCCCCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcccccccccccc
Q psy7224 203 TKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVA 282 (297)
Q Consensus 203 T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~ 282 (297)
...+...+++.+|++||.|+|++|+.|||++|+++|.|+++.. . | ++||+||||+||||+||++.+||.++++||.
T Consensus 7 ~~~~~~~~rr~~Vk~~F~haw~~Y~~~Awg~DEL~PlS~~g~d-~-~--gg~g~TlVDsLDTL~IMgl~~Ef~~A~~~v~ 82 (503)
T 1hcu_A 7 KRGSPNPTRAAAVKAAFQTSWNAYHHFAFPHDDLHPVSNSFDD-E-R--NGWGSSAIDGLDTAILMGDADIVNTILQYVP 82 (503)
T ss_dssp CBCCCCHHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEEC-T-T--TTSCHHHHHHHHHHHHTTCHHHHHHHHHHGG
T ss_pred CCcccHHHHHHHHHHHHHHHHHHHHHhCCCccccccCcCCccC-C-C--CCcceeehhhccchhhcCCHHHHHHHHHHHH
Confidence 4466778899999999999999999999999999999987553 2 3 5899999999999999999999999999998
Q ss_pred cccccCC----CCccccc
Q psy7224 283 ESLTLDD----KTHKVVM 296 (297)
Q Consensus 283 nt~~f~~----~~~~~~~ 296 (297)
+++|++ +..||||
T Consensus 83 -~l~f~~~~~~~~~VsvF 99 (503)
T 1hcu_A 83 -QINFTTTAVANQGSSVF 99 (503)
T ss_dssp -GCCTTCCSSTTCCEEHH
T ss_pred -hCCCCcccccCCccchh
Confidence 799998 8999998
No 9
>2ri9_A Mannosyl-oligosaccharide alpha-1,2-mannosidase; alternative conformations, modulation of activity, glycoprot glycosidase, hydrolase; HET: NAG NDG MAN MMA; 1.95A {Penicillium citrinum} SCOP: a.102.2.1 PDB: 2ri8_A* 1kkt_A* 1kre_A* 1krf_A*
Probab=99.53 E-value=1.3e-15 Score=149.50 Aligned_cols=83 Identities=25% Similarity=0.402 Sum_probs=76.3
Q ss_pred hhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCcccccccccccccccccC
Q psy7224 209 REWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESLTLD 288 (297)
Q Consensus 209 re~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~~f~ 288 (297)
.+++.+|++||.|+|++|+.|||++|+++|.|++++. . | ++||+||||+||||+||++.+||.++++||. +++|+
T Consensus 3 ~~r~~~Vk~~F~haw~~Y~~~Awg~DEl~PlS~~~~d-~-~--gg~g~TlVDsLDTL~IMgl~~Ef~~a~~~v~-~~~f~ 77 (475)
T 2ri9_A 3 QAKADAVKEAFQHAWNGYMKYAFPHDELTPVSNGHAD-S-R--NGWGASAVDALSTAVIMGKADVVNAILEHVA-DIDFS 77 (475)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTTSSEEETTTTEEEC-T-T--TTSCHHHHHHHHHHHHHTCHHHHHHHHHHHH-HCCTT
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCcccccCCCCCccC-C-C--CCcceeehhhccchhhcCCHHHHHHHHHHHH-hCCCC
Confidence 4678899999999999999999999999999987553 2 3 5899999999999999999999999999998 79999
Q ss_pred C-CCccccc
Q psy7224 289 D-KTHKVVM 296 (297)
Q Consensus 289 ~-~~~~~~~ 296 (297)
+ +..||||
T Consensus 78 ~~~~~vsvF 86 (475)
T 2ri9_A 78 KTSDTVSLF 86 (475)
T ss_dssp CCSSCEEHH
T ss_pred cCCCccchh
Confidence 9 9999998
No 10
>1x9d_A Endoplasmic reticulum mannosyl-oligosaccharide 1, 2-alpha-mannosidase; substrate analogue, glycosyl hydrolase; HET: SMD; 1.41A {Homo sapiens} SCOP: a.102.2.1 PDB: 1fo3_A* 1fo2_A* 1fmi_A
Probab=99.52 E-value=1.6e-15 Score=150.31 Aligned_cols=86 Identities=36% Similarity=0.760 Sum_probs=78.0
Q ss_pred CCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHhcCccccccccccccccc
Q psy7224 206 PKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIMGLTDEYEDGKKWVAESL 285 (297)
Q Consensus 206 ~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLmf~~~e~~~~~~~V~nt~ 285 (297)
....+++.+|+++|.|+|++|+.|||++|+++|.|++++. .|+ + |+||||+|||||||++.+||.++++||.+++
T Consensus 83 ~~~~~rr~~Vk~~F~haW~~Y~~~Awg~DEL~PlS~~g~d--~fg--~-g~TLVDSLDTL~IMgl~~EF~~A~~~V~~~~ 157 (538)
T 1x9d_A 83 VHLNYRQKGVIDVFLHAWKGYRKFAWGHDELKPVSRSFSE--WFG--L-GLTLIDALDTMWILGLRKEFEEARKWVSKKL 157 (538)
T ss_dssp -CCCHHHHHHHHHHHHHHHHHHHHCTTSSEEETTTTEEEC--SSS--S-CHHHHHHHHHHHHTTCHHHHHHHHHHHHHHC
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHhcCCccccccCCCCccc--ccC--C-ceeeeeccceeeecCCHHHHHHHHHHHHHhc
Confidence 3466889999999999999999999999999999987553 352 3 9999999999999999999999999999999
Q ss_pred ccCCCCccccc
Q psy7224 286 TLDDKTHKVVM 296 (297)
Q Consensus 286 ~f~~~~~~~~~ 296 (297)
+|+.+..||||
T Consensus 158 ~f~~d~~VsvF 168 (538)
T 1x9d_A 158 HFEKDVDVNLF 168 (538)
T ss_dssp CCCSSCEEEHH
T ss_pred CCCCCceeehh
Confidence 99999999998
No 11
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=97.92 E-value=1.1e-05 Score=76.04 Aligned_cols=201 Identities=12% Similarity=0.082 Sum_probs=109.4
Q ss_pred hhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhh
Q psy7224 12 TTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYL 91 (297)
Q Consensus 12 ttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~L 91 (297)
.+-=++-||+.+|..++|+.+|++|+++++.++.-|..+.|.-..... ... . .. .++...-+..-+..|
T Consensus 116 ~~af~i~al~~~y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~~~~~--~~~--~-----~~--~~~~~~~~~~all~l 184 (388)
T 2gz6_A 116 SDCFAAMAFSQYALASGEEWAKDVAMQAYNNVLRRKDNPKGKYTKTYP--GTR--P-----MK--ALAVPMILANLTLEM 184 (388)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHTC----------------CC--C-----CE--ETHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccCcccC--CCC--C-----CC--CCCHHHHHHHHHHHH
Confidence 345578899999999999999999999999999988655554211110 000 0 00 011111122225668
Q ss_pred HhhhCChhhHHHHHHHHHHHHhc--CCCCCCCCccccCCCCc---cccceeeecCCchhHHHHHHHHHHhhCCCCCC---
Q psy7224 92 SDVTGNPIYREKVEKIRSVISSI--EKPNGLYPNYLNPKTGH---WGQSHISMGALGDSFYEYLLKAWIQSNKEDTE--- 163 (297)
Q Consensus 92 S~lTgd~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~~~g~---~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~--- 163 (297)
.++|||++|.+.|.++.+.+... ....|.+..++++.-.. .....++.|..+- ----|++.+.++|+....
T Consensus 185 ~~~t~d~~~~~~A~~~~~~~~~~~~~~~~g~~~e~~~~~w~~~~~~~~~~~~pgh~~e-~a~lL~~~~~~tgd~~~~~~A 263 (388)
T 2gz6_A 185 EWLLPQETLENVLAATVQEVMGDFLDQEQGLMYENVAPDGSHIDCFEGRLINPGHGIE-AMWFIMDIARRKNDSKTINQA 263 (388)
T ss_dssp GGGSCHHHHHHHHHHHHHHHHHTTEETTTTEECSEECTTSCCCCSTTTTEECHHHHHH-HHHHHHHHHHHTTCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHHHHHHHHHHhccCCCeEEEEECCCCCCCCCcccCcCCCCHHHH-HHHHHHHHHHHcCCHHHHHHH
Confidence 99999999999999999987763 34557776666653211 1112223232211 122466777777654321
Q ss_pred ------------CCc---cccccchhhhhhhc---ccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcc
Q psy7224 164 ------------GPE---SFKFTDTLEAKAYR---SQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDN 225 (297)
Q Consensus 164 ------------~PE---~~~~~~~~~~~~~~---~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~ 225 (297)
-|+ .+.+..... .... ..+...----|.+-.+-.+|+.|||++|.+++.++.+-+..+...
T Consensus 264 ~~~~~~~~~~g~d~~~Gg~~~~~~~~g-~~~~~~~~~~~~~W~qae~i~a~~~ly~~tgd~~yl~~a~~~~~~~~~~~~D 342 (388)
T 2gz6_A 264 VDVVLNILNFAWDNEYGGLYYFMDAAG-HPPQQLEWDQKLWWVHLESLVALAMGYRLTGRDACWAWYQKMHDYSWQHFAD 342 (388)
T ss_dssp HHHHHHHHHHHBCTTTCSBCSCEETTS-CCCSCTTTTCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBC
T ss_pred HHHHHHHHHHhccCCCCCEEEeecCCC-CccccCcCCCcCcHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhCcC
Confidence 111 000000000 0000 000000001356666778999999999999999999988777654
No 12
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=97.76 E-value=1.7e-05 Score=74.76 Aligned_cols=147 Identities=15% Similarity=0.150 Sum_probs=93.5
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHH-hcccCCC--CCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 19 AILTLYSFTGDPMYRDKAVHIADKM-LPAFKTP--TGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 19 GLLSAy~Ls~d~~lL~kA~~lad~L-l~AF~tp--~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
+++.||++++|+.+|++|+++.+.| ...|+++ .|+++..- . .. ...+ + .-|-+..=+.+|+++|
T Consensus 100 a~~~aye~t~~~~yL~~A~~l~~~l~~~~wd~~~gGGi~W~~~---~---~~-----~kna-i-sN~~~~~~la~l~~~t 166 (349)
T 3k7x_A 100 AAYRLYKATGKSIYLEDAQLVWQDLVDTGWNDIMGGGFAWRRP---Q---MY-----YKNT-P-VNAPFIILSCWLYNEL 166 (349)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHTBCSGGGSCBEEETT---E---EE-----EEEH-H-HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCchHHHHHHHHHHHHHHhCCCCCCCCceEecCC---C---cc-----ccch-h-hHHHHHHHHHHHHHHh
Confidence 7899999999999999999999999 7999975 35544210 0 00 0001 1 1112233346789999
Q ss_pred CChhhHHHHHHHHHHHHhc-CCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccchh
Q psy7224 96 GNPIYREKVEKIRSVISSI-EKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDTL 174 (297)
Q Consensus 96 gd~~y~~~a~~~~~~l~~~-~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~~ 174 (297)
||++|.+.|+++++.+.+. ....|++-..++.. . .|..+. +..+.+..
T Consensus 167 gd~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~---~------------------------~g~~~~--~~~~tYnq-- 215 (349)
T 3k7x_A 167 NETKYLEWAMKTYEWQTKVLVREDGFVEDGINRL---E------------------------DGTIDY--EWKFTYNQ-- 215 (349)
T ss_dssp CCHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTT---S------------------------SSCBCT--TCCCHHHH--
T ss_pred CCHHHHHHHHHHHHHHHhcCCCCCCeEecCCccC---C------------------------CCccCC--cCeeeHHH--
Confidence 9999999999999987652 22224432111110 0 010000 00111110
Q ss_pred hhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhc
Q psy7224 175 EAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWD 224 (297)
Q Consensus 175 ~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~ 224 (297)
+ -+++.+=.|||+|||++|.+.+.++.+.+.+++-
T Consensus 216 ---------g------~~l~g~~~LY~~T~d~~yl~~a~~l~~~~~~~f~ 250 (349)
T 3k7x_A 216 ---------G------VYIGANLELYRITKEAIYLDTANKTAAISLKELT 250 (349)
T ss_dssp ---------H------HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHE
T ss_pred ---------H------HHHHHHHHHHHhhCcHHHHHHHHHHHHHHHHHhc
Confidence 0 1678888999999999999999999999877654
No 13
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.56 E-value=0.00012 Score=69.68 Aligned_cols=206 Identities=13% Similarity=-0.025 Sum_probs=115.0
Q ss_pred hhhhhhhhhccCCCchHHHHHHHHHHHHhccc-CCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhh
Q psy7224 16 FIGAILTLYSFTGDPMYRDKAVHIADKMLPAF-KTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDV 94 (297)
Q Consensus 16 ~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF-~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~l 94 (297)
++=||+. |..++|+..|++|+++.+.|..-| |...|.-+...+.... ... .. .......+..=+.+|.++
T Consensus 118 ~i~al~~-~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~-~~~-----~~--~~n~~m~l~eall~L~~~ 188 (402)
T 3gt5_A 118 VMLAYSC-GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN-FTR-----YR--GQNANMHMCEAMLAAYEA 188 (402)
T ss_dssp HHHHHHH-HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC-BCS-----CE--EHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHH-HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC-CCC-----CC--CCCHHHHHHHHHHHHHHh
Confidence 4556777 667999999999999999999876 4444543322221100 000 00 000001112227889999
Q ss_pred hCChhhHHHHHHHHHHHHhc--CCCCCCCCccccCCCCcc-----c-------cceeeecCCchhHHHH---HHHHHHhh
Q psy7224 95 TGNPIYREKVEKIRSVISSI--EKPNGLYPNYLNPKTGHW-----G-------QSHISMGALGDSFYEY---LLKAWIQS 157 (297)
Q Consensus 95 Tgd~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~~~g~~-----~-------~~~~~~Ga~~DS~yEY---LlK~~~l~ 157 (297)
|||++|.+.|.++.+.+... ....|.++.++++.-..- . +..++.|. -.|. |+.....+
T Consensus 189 tgd~~~~~~a~~l~~~~~~~f~~~~~g~l~e~~~~dw~~~~~~~~~~~~~~~~~~~~~pGH----~iE~awlLl~~~~~~ 264 (402)
T 3gt5_A 189 SGEQRYLERALVLADRITRRQAAKADGLVWEHYDMRWEVDWDYNRDNPKHLFRPWGFQPGH----QTEWAKLLLILDRYI 264 (402)
T ss_dssp HCCHHHHHHHHHHHHHHHTHHHHTTTTSCCSEECTTSCBCTTTTTTSTTCSSSCSSBCHHH----HHHHHHHHHHHHHHC
T ss_pred hCCHHHHHHHHHHHHHHHHHhhCccCCeeEEEECCCCCCccccccCCcccccCcCCCCCCh----HHHHHHHHHHHHHhh
Confidence 99999999999998877652 345688888887542110 0 00012221 1232 55555555
Q ss_pred CCCCCC---------------CCc---cccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHH
Q psy7224 158 NKEDTE---------------GPE---SFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMM 219 (297)
Q Consensus 158 g~~~~~---------------~PE---~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~ 219 (297)
|+.... -|+ .+.+..... ..+. ..+..----|.+=.+..||++|||++|.+++.++.+-+
T Consensus 265 ~~~~~~~~A~~l~~~~~~~gwd~~~Gg~~~~~d~~g-~~~~-~~k~~W~qaEal~a~l~ly~~tgd~~yl~~a~~~~~~~ 342 (402)
T 3gt5_A 265 EVEWLVPVARSLFDVAVARSWDAVRGGLCYGFAPDG-TICD-DDKYFWVQAESLAAAALLATRSGDERYWQWYDRLWAYA 342 (402)
T ss_dssp CCTTHHHHHHHHHHHHHHHHBCTTTCSBCSEECTTS-CEEE-CCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcccCCCCcEEEEEcCCC-Ceee-CCcceeHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 543221 111 011100000 0000 01111112477777889999999999999999999988
Q ss_pred HHhhcccccccccccccc
Q psy7224 220 KHAWDNYVTYAWGKNELK 237 (297)
Q Consensus 220 ~~~~~~y~gya~~~Dv~~ 237 (297)
.++..... +....+.+.
T Consensus 343 ~~~~~D~~-~G~W~~~l~ 359 (402)
T 3gt5_A 343 WQHMVDHR-YGAWYRLLD 359 (402)
T ss_dssp HHHTBCTT-TCSBCSEEC
T ss_pred HHhCcCCC-CCeEEEEEC
Confidence 87777642 334444444
No 14
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=97.44 E-value=0.00028 Score=67.60 Aligned_cols=212 Identities=14% Similarity=0.095 Sum_probs=117.5
Q ss_pred hhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCC-CCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhH
Q psy7224 14 IRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTP-TGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLS 92 (297)
Q Consensus 14 IR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp-~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS 92 (297)
.=++-+++. |.+++++..++.|+++.+.+..-|-.| .|.-+...+-... .. .+........-+..-+..|.
T Consensus 114 Af~i~al~~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~-~~------~~~~~~n~~m~~~~al~~l~ 185 (421)
T 2zbl_A 114 FFALLGAAS-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFS-QT------EDYRGGNANMHAVEAFLIVY 185 (421)
T ss_dssp HHHHHHHHH-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSC-SB------CSCEEHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCC-cc------cccCCCcHHHHHHHHHHHHH
Confidence 345567788 999999999999999999998877544 6755444332211 00 01111111112345577899
Q ss_pred hhhCChhhHHHHHHHHHHHHhc-C-CCCCCCCccccCCCCccccceeeecCCchhH----------HH---HHHHHHHhh
Q psy7224 93 DVTGNPIYREKVEKIRSVISSI-E-KPNGLYPNYLNPKTGHWGQSHISMGALGDSF----------YE---YLLKAWIQS 157 (297)
Q Consensus 93 ~lTgd~~y~~~a~~~~~~l~~~-~-~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~----------yE---YLlK~~~l~ 157 (297)
++|||++|.+.|.++.+.+... . ...|.++.+++..-..-.+ ...+...+.+ .| -|++.+..+
T Consensus 186 ~~tgd~~~~~~A~~~~~~~~~~~~~~~~~~l~~~f~~~~~~~~~--~~~dd~~~r~~~~~~~pgh~iE~~wlLl~~~~~~ 263 (421)
T 2zbl_A 186 DVTHDKKWLDRALRIASVIIHDVARNGDYRVNEHFDSQWNPIRD--YNKDNPAHRFRAYGGTPGAWIEWGRLMLHLHAAL 263 (421)
T ss_dssp HTTCCTHHHHHHHHHHHHHCCCCCGGGTTCCCCEECTTSCBCTT--TTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCHHHHHHHHHHHHHHHHHhccCCCCchhhhcCCccccchh--ccCCCcccccccCCCCCChHHHHHHHHHHHHHHc
Confidence 9999999999999999887653 2 2345666666543211000 0001111111 11 345556555
Q ss_pred CCC-C--C-C-----------------CCc---cccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhH
Q psy7224 158 NKE-D--T-E-----------------GPE---SFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGW 213 (297)
Q Consensus 158 g~~-~--~-~-----------------~PE---~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w 213 (297)
++. + . . -|+ .+.+....... .....+..----|.+..+..||++|||++|.+++.
T Consensus 264 ~~~~~~~~~~~l~~A~~l~~~~~~~g~d~~~~GG~~~~~~~~g~-~~~~~k~~w~~aea~~all~l~~~tgd~~yl~~a~ 342 (421)
T 2zbl_A 264 EARFETPPAWLLEDAKGLFHATIRDAWAPDGADGFVYSVDWDGK-PIVRERVRWPIVEAMGTAYALYTLTDDSQYEEWYQ 342 (421)
T ss_dssp HHTTCCCCTHHHHHHHHHHHHHHHHHBSCSSSSSBCSCBCTTSC-BSCCCEEHHHHHHHHHHHHHHHHHHCCHHHHHHHH
T ss_pred ccccccchHHHHHHHHHHHHHHHHHhcCCCCCCcEEEeecCCCC-ccCCCcccHHHHHHHHHHHHHHHHhCCHHHHHHHH
Confidence 321 1 1 0 122 11111000000 00000000002478888999999999999999999
Q ss_pred HHHHHHHHhhcccccccccccccc
Q psy7224 214 DYVQMMKHAWDNYVTYAWGKNELK 237 (297)
Q Consensus 214 ~i~~a~~~~~~~y~gya~~~Dv~~ 237 (297)
++.+.+..+.... .+....+.+.
T Consensus 343 ~~~~~~~~~~~d~-~~G~w~~~l~ 365 (421)
T 2zbl_A 343 KWWDYCIKYLMDY-ENGSWWQELD 365 (421)
T ss_dssp HHHHHHHHHTBCT-TTSSBCSEEC
T ss_pred HHHHHHHHhCCCC-CCCeeEeeEC
Confidence 9999998887754 3344444443
No 15
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=97.18 E-value=0.0011 Score=63.12 Aligned_cols=174 Identities=16% Similarity=0.083 Sum_probs=102.9
Q ss_pred hhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhh
Q psy7224 15 RFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDV 94 (297)
Q Consensus 15 R~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~l 94 (297)
=++|||+-+|+.++|+.+++.|++..+.++.. +.|.. | .. .. .+.+-+..|=++
T Consensus 72 ~~~~gl~~~ye~Tgd~~y~~~a~~~~~~~~~~-----~~~~~--n------~D-----~~--------~~~~~l~~lY~~ 125 (382)
T 3pmm_A 72 VGLYGIYQYYQQTGDIEMRDIIDRWFADRFAE-----GATTK--N------VN-----TM--------APFLTLAYRFEE 125 (382)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH-----CCCCC--C------TT-----TT--------TTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHcC-----CCCcC--c------cc-----ch--------HHHHHHHHHHHH
Confidence 37899999999999999999999999987642 22211 0 00 01 111234788899
Q ss_pred hCChhhHHHHHHHHHHHHhc-C-CCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccc
Q psy7224 95 TGNPIYREKVEKIRSVISSI-E-KPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTD 172 (297)
Q Consensus 95 Tgd~~y~~~a~~~~~~l~~~-~-~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~ 172 (297)
|||++|.+.|.+..+.|.+. . ...|-+-... . ++. -|..+.
T Consensus 126 Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~---~----------------------------~~~---~~~~~W--- 168 (382)
T 3pmm_A 126 TGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMT---L----------------------------AEE---NHQQMW--- 168 (382)
T ss_dssp HCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCC---S----------------------------SCC---CTTEEE---
T ss_pred hCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeec---C----------------------------CCC---CCCcEE---
Confidence 99999999999999987542 1 2222211000 0 000 001111
Q ss_pred hhhhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCC-C
Q psy7224 173 TLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFG-S 251 (297)
Q Consensus 173 ~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~-~ 251 (297)
.|.-+ -.+.-++.++++|||++|.+.|.+.+..+.++......--+.|+..... ..+..+++|+ +
T Consensus 169 ---------iDgl~----M~~p~La~~~~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~~-~~~~~~~~WaRG 234 (382)
T 3pmm_A 169 ---------DDTLM----MTVLPLAKIGKLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYEG-RHNFARARWARG 234 (382)
T ss_dssp ---------TTHHH----HTHHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTT-TBCTTCCCBHHH
T ss_pred ---------ecchh----hhHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHccCCCCCCeeeeccCCC-CCCCCcceeccc
Confidence 11111 1344567789999999999999877777777665433222333322111 1123467775 2
Q ss_pred Ccchh-hHHhhhhHH
Q psy7224 252 AELGM-TIIDGLDTL 265 (297)
Q Consensus 252 ~~~~~-tl~eTLkyL 265 (297)
++|++ .++++|+++
T Consensus 235 ~gW~~~gl~~~l~~l 249 (382)
T 3pmm_A 235 NSWLTMVIPDFLELV 249 (382)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHhh
Confidence 35653 788888875
No 16
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=97.12 E-value=0.0014 Score=61.76 Aligned_cols=177 Identities=16% Similarity=0.174 Sum_probs=102.7
Q ss_pred hhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhh
Q psy7224 15 RFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDV 94 (297)
Q Consensus 15 R~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~l 94 (297)
=+++||+-+|++++|+.+++.|++.++.++. +.|-+. .+.+.. .. .+ +| .=+..|-++
T Consensus 45 ~~~~gl~~~y~~tgd~~y~~~a~~~~~~~~~----~~g~l~----~~~~~l--------Dd--~~-~g---~~ll~lY~~ 102 (373)
T 1nc5_A 45 VFLCGVLRLWEATGEKRYFEYAKAYADLLID----DNGNLL----FRRDEL--------DA--IQ-AG---LILFPLYEQ 102 (373)
T ss_dssp HHHHHHHHHHHHHCCHHHHHHHHHHHHHHBC----TTCCBC----CCTTCG--------GG--TG-GG---GGHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHhC----CCCccc----CCCCCc--------ch--HH-HH---HHHHHHHHH
Confidence 4689999999999999999999999999862 223111 111110 00 11 23 234567889
Q ss_pred hCChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccchh
Q psy7224 95 TGNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDTL 174 (297)
Q Consensus 95 Tgd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~~ 174 (297)
|||++|.+.|..+.+.|....+ ...|.+-.. . + -|+.. +
T Consensus 103 Tgd~~yl~~a~~la~~l~~~~r----------~~~G~fw~~------~---------------~-----~~~~~-w---- 141 (373)
T 1nc5_A 103 TKDERYVKAAKRLRSLYGTLNR----------TSEGGFWHK------D---------------G-----YPYQM-W---- 141 (373)
T ss_dssp HCCHHHHHHHHHHHGGGGTSCB----------CTTSCBCSC------T---------------T-----STTEE-E----
T ss_pred hCCHHHHHHHHHHHHHHHhccC----------CCCCCeecc------C---------------C-----CCCeE-E----
Confidence 9999999999998887754221 111111100 0 0 01111 1
Q ss_pred hhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccCC------CCCCCCCCC
Q psy7224 175 EAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPL------SRRGHSGSI 248 (297)
Q Consensus 175 ~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~------s~~d~~~Sf 248 (297)
.|.-+ -.+.-++-++++|||++|.+.|.+.++.+.++......--+.+...... +..+..++|
T Consensus 142 -------~D~l~----m~~p~L~~l~~~tgd~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~~~~~w~d~~tg~~~~~ 210 (373)
T 1nc5_A 142 -------LDGLY----MGGPFALKYANLKQETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEAKKMPWANEETGCSPEF 210 (373)
T ss_dssp -------THHHH----HHHHHHHHHHHHHTCTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETTCCSTTSCTTTCBCSCC
T ss_pred -------eCcHH----HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHhcCCCCCCEEeecCCccccccccccCCCCCCc
Confidence 11111 1233467789999999999999999999888775432211212221111 111334577
Q ss_pred CCC-Ccchh-hHHhhhhHH
Q psy7224 249 FGS-AELGM-TIIDGLDTL 265 (297)
Q Consensus 249 ~~~-~~~~~-tl~eTLkyL 265 (297)
|.. .+|++ .+++.|+++
T Consensus 211 WaRg~gW~~~gl~~~l~~l 229 (373)
T 1nc5_A 211 WARSIGWYVMSLADMIEEL 229 (373)
T ss_dssp BHHHHHHHHHHHHHHGGGS
T ss_pred ccchHhHHHHHHHHHHHhC
Confidence 752 35553 688888875
No 17
>3gt5_A N-acetylglucosamine 2-epimerase; structural genomics, isomerase, PSI-2; 1.70A {Xylella fastidiosa}
Probab=97.04 E-value=0.0014 Score=62.35 Aligned_cols=204 Identities=15% Similarity=0.119 Sum_probs=114.8
Q ss_pred hhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCC-CCcccceeecCCCCCCCCcCCCCcceecccccceeehhhh
Q psy7224 13 TIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPT-GIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYL 91 (297)
Q Consensus 13 tIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~-giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~L 91 (297)
+-|.|=++--||.+++++.+|+.|++..+.|...+-.+. |--+..+ +.|.+... ...+=.-+=+++=+..
T Consensus 54 n~r~i~~~a~a~~~~g~~~~l~~A~~~~~fl~~~~~d~~~Gg~~~~~--~dG~~~~~------~~~lyd~Af~i~al~~- 124 (402)
T 3gt5_A 54 STRFVFNYAMAYLQFGTAEYLDAVHHGLSYVRDVHRNPATGGYAWTL--CDDRVEDD------TNHCYGLAFVMLAYSC- 124 (402)
T ss_dssp HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTTBCTTTSCBCSEE--ETTEEEEC------CEEHHHHHHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhhCChHHHHHHHHHHHHHHHhCccCCCCcEEEEe--eCCCCCcC------CcchHHHHHHHHHHHH-
Confidence 568899999999999999999999999999987654444 4333333 44433110 0111111111222223
Q ss_pred HhhhCChhhHHHHHHHHHHHHhcC--CCCCCCCccccCCCCccccceeeecCCch-hHHHHHHHHHHhhCCCCCC-----
Q psy7224 92 SDVTGNPIYREKVEKIRSVISSIE--KPNGLYPNYLNPKTGHWGQSHISMGALGD-SFYEYLLKAWIQSNKEDTE----- 163 (297)
Q Consensus 92 S~lTgd~~y~~~a~~~~~~l~~~~--~~~gL~p~~i~~~~g~~~~~~~~~Ga~~D-S~yEYLlK~~~l~g~~~~~----- 163 (297)
.+.|||+.|.+.|.++.+.+.+.. ...|++-...++... ....- +.++- -.-|-++..+.++|+....
T Consensus 125 ~~~tgd~~~l~~A~~l~~~i~~~f~d~~~G~~~~~~~~~~~--~~~~~--~~n~~m~l~eall~L~~~tgd~~~~~~a~~ 200 (402)
T 3gt5_A 125 GLKVGIKQAREWMDETWCLLERHFWDAEYGLYKDEADAQWN--FTRYR--GQNANMHMCEAMLAAYEASGEQRYLERALV 200 (402)
T ss_dssp HHHTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTCC--BCSCE--EHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
T ss_pred HHHhCChhHHHHHHHHHHHHHHHhcCCcCCCchhhhCCCCC--CCCCC--CCCHHHHHHHHHHHHHHhhCCHHHHHHHHH
Confidence 345999999999999999887642 345665544443211 11110 11111 1457777777777764321
Q ss_pred ----------------CCccccccchhhhhhhcccccccCCCh------hhhhhhhhhh---hhcCCCCchhhhHHHHHH
Q psy7224 164 ----------------GPESFKFTDTLEAKAYRSQDKYYILRP------EVIESYFYLW---RVTKDPKYREWGWDYVQM 218 (297)
Q Consensus 164 ----------------~PE~~~~~~~~~~~~~~~~~~~y~lRP------E~iES~fyl~---r~T~d~~yre~~w~i~~a 218 (297)
.+|.|.-. ..........++...+|| -.||..+.|. ++|+++.|.++|.++++.
T Consensus 201 l~~~~~~~f~~~~~g~l~e~~~~d-w~~~~~~~~~~~~~~~~~~~~~pGH~iE~awlLl~~~~~~~~~~~~~~A~~l~~~ 279 (402)
T 3gt5_A 201 LADRITRRQAAKADGLVWEHYDMR-WEVDWDYNRDNPKHLFRPWGFQPGHQTEWAKLLLILDRYIEVEWLVPVARSLFDV 279 (402)
T ss_dssp HHHHHHTHHHHTTTTSCCSEECTT-SCBCTTTTTTSTTCSSSCSSBCHHHHHHHHHHHHHHHHHCCCTTHHHHHHHHHHH
T ss_pred HHHHHHHHhhCccCCeeEEEECCC-CCCccccccCCcccccCcCCCCCChHHHHHHHHHHHHHhhCcHHHHHHHHHHHHH
Confidence 22222100 000000001122234444 2577766654 559999999999999887
Q ss_pred H-HHhhccc-cccc
Q psy7224 219 M-KHAWDNY-VTYA 230 (297)
Q Consensus 219 ~-~~~~~~y-~gya 230 (297)
. ++.|... +|+.
T Consensus 280 ~~~~gwd~~~Gg~~ 293 (402)
T 3gt5_A 280 AVARSWDAVRGGLC 293 (402)
T ss_dssp HHHHHBCTTTCSBC
T ss_pred HHHhcccCCCCcEE
Confidence 5 6677753 4443
No 18
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=97.00 E-value=0.0012 Score=63.16 Aligned_cols=159 Identities=15% Similarity=0.184 Sum_probs=94.3
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceeccccccee-ehhhhHhhhCC
Q psy7224 19 AILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHL-EFVYLSDVTGN 97 (297)
Q Consensus 19 GLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~L-Ef~~LS~lTgd 97 (297)
.+..+|.|++|+.+++-|.+-|+.|+.-|++..|.-.. ++. .+.+ +. ...++ +.- +.| =+..-+++|||
T Consensus 122 s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~iqs-w~~-~~~~----~~--~~~iI-D~~-mni~~L~~A~~~~gd 191 (397)
T 2zzr_A 122 SCTAEYRINGDVKALEATIKAADKLMERYQEKGGFIQA-WGE-LGYK----EH--YRLII-DCL-LNIQLLFFAYEQTGD 191 (397)
T ss_dssp THHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEECC-SSS-TTCG----GG--CEEET-THH-HHTHHHHHHHHHHCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhCcCCCEEEe-ccc-CCCC----CC--Cceee-chH-hHHHHHHHHHHHhCC
Confidence 56779999999999999999999999999765554332 221 1100 00 11111 110 111 23345799999
Q ss_pred hhhHHHHHHHHHHHHh-cCCC-CCCC-CccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccchh
Q psy7224 98 PIYREKVEKIRSVISS-IEKP-NGLY-PNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDTL 174 (297)
Q Consensus 98 ~~y~~~a~~~~~~l~~-~~~~-~gL~-p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~~ 174 (297)
|+|.+.|.+..+.+.+ +.+. ..++ -...|+.+|.+... .+.-+..|.+ .|..+.
T Consensus 192 ~~y~~~A~~ha~~~l~~~~r~dgs~~h~~~~d~~~G~~~~~-~t~qGy~dds----------------------~WaRGq 248 (397)
T 2zzr_A 192 EKYRQVAVNHFYASANNVVRDDSSAFHTFYFDPETGEPLKG-VTRQGYSDES----------------------SWARGQ 248 (397)
T ss_dssp HHHHHHHHHHHHHHHHHTBCTTSCBCSEEEECTTTCCEEEE-ECTTSSSTTS----------------------CBHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCcccC-CcccccCcch----------------------hhHHHH
Confidence 9999999976665543 3332 2333 23457777765321 1121222211 011100
Q ss_pred hhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcc
Q psy7224 175 EAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDN 225 (297)
Q Consensus 175 ~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~ 225 (297)
+. .|..+-.+||.|+|++|.+.|.++.+.+..++..
T Consensus 249 ---------Aw------~i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~~ 284 (397)
T 2zzr_A 249 ---------AW------GIYGIPLSYRKMKDYQQIILFKGMTNYFLNRLPE 284 (397)
T ss_dssp ---------HH------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCCT
T ss_pred ---------HH------HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhHH
Confidence 00 3444455799999999999999999999988754
No 19
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=96.87 E-value=0.0047 Score=58.71 Aligned_cols=162 Identities=17% Similarity=0.161 Sum_probs=94.6
Q ss_pred hhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCC
Q psy7224 18 GAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGN 97 (297)
Q Consensus 18 GGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd 97 (297)
-++..+|.|++|+.+++-|++-|+.|+.-|+...|.-. .++.. +. +.| .+..++=..-. +.=+...+++|||
T Consensus 95 ~s~~~~y~ltg~~~~~~~~~~aA~~L~~r~~~~~g~i~-sw~~~-~~---~~~--~~~~iID~mmn-i~~L~~A~~~~gd 166 (377)
T 2ahf_A 95 LSAKAQWIVEKDESARKLALDAADVLMRRWRADAGIIQ-AWGPK-GD---PEN--GGRIIIDCLLN-LPLLLWAGEQTGD 166 (377)
T ss_dssp TTHHHHHHHHCCHHHHHHHHHHHHHHHTTEETTTTEEC-CBSST-TC---TTT--TTEEEGGGGGG-HHHHHHHHHHHCC
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHhCCCCCCeEE-eccCC-CC---CCC--CceEEechHHH-HHHHHHHHHHhCC
Confidence 35677899999999999999999999999984334322 22211 10 111 01111111110 1113446789999
Q ss_pred hhhHHHHHHHHHHHHh-cCCC-CCCC-CccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCccccccchh
Q psy7224 98 PIYREKVEKIRSVISS-IEKP-NGLY-PNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPESFKFTDTL 174 (297)
Q Consensus 98 ~~y~~~a~~~~~~l~~-~~~~-~gL~-p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~~~~~~~~ 174 (297)
|+|.+.|.+..+.+.+ +.+. ..++ -..+|+.+|.+... .+.-+..|.+ .|..+.
T Consensus 167 ~~y~~~A~~~a~~~l~~~~r~dgs~~h~~~~D~~tG~~~~~-~t~qG~~dds----------------------~WaRGq 223 (377)
T 2ahf_A 167 PEYRRVAEAHALKSRRFLVRGDDSSYHTFYFDPENGNAIRG-GTHQGNTDGS----------------------TWTRGQ 223 (377)
T ss_dssp THHHHHHHHHHHHHHHHTBBTTSCBCSEEEECTTTCCEEEE-ECSSSSSTTS----------------------CBHHHH
T ss_pred HHHHHHHHHHHHHHHHhCcCCCCCeEEEEEeeCCCCCeeeC-CCcCCcCCcc----------------------hhHHHH
Confidence 9999999997665544 3332 2333 33468888876321 1111222210 011100
Q ss_pred hhhhhcccccccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcc
Q psy7224 175 EAKAYRSQDKYYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDN 225 (297)
Q Consensus 175 ~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~ 225 (297)
+. +|..+-.+||.|+|++|.+.|.++.+.+..+...
T Consensus 224 ---------Aw------~i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~~~ 259 (377)
T 2ahf_A 224 ---------AW------GIYGFALNSRYLGNADLLETAKRMARHFLARVPE 259 (377)
T ss_dssp ---------HH------HHHHHHHHHHHHTCHHHHHHHHHHHHHHHTTCCT
T ss_pred ---------HH------HHHHHHHHHHHHCChHHHHHHHHHHHHHHHhhHH
Confidence 00 3444455789999999999999999999888743
No 20
>2gz6_A N-acetyl-D-glucosamine 2-epimerase; anabaena SP. CH1, isomer; 2.00A {Anabaena SP}
Probab=96.46 E-value=0.0055 Score=57.25 Aligned_cols=104 Identities=11% Similarity=0.009 Sum_probs=68.3
Q ss_pred hhhhhhhhhhhhhcc-CCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhh
Q psy7224 12 TTIRFIGAILTLYSF-TGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVY 90 (297)
Q Consensus 12 ttIR~LGGLLSAy~L-s~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~ 90 (297)
.+-|.|=.+.-||.+ ++++.+++.|++..+.|+..+-.|.|--+..++ ..|.+.. ....+-.-+=+++-+..
T Consensus 54 ~nar~i~~~a~a~~~~~~~~~~~~~A~~~~~~l~~~~~~~~Gg~~~~~d-~dg~~~~------~~~~~~~~af~i~al~~ 126 (388)
T 2gz6_A 54 LQNRQVWTFSMLCNQLEKRENWLKIARNGAKFLAQHGRDDEGNWYFALT-RGGEPLV------QPYNIFSDCFAAMAFSQ 126 (388)
T ss_dssp HHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHSBCTTSCBCSEEC-TTSCBCC------CCCCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc-CCCCccc------CCcchHHHHHHHHHHHH
Confidence 567888888899998 899999999999999999986655564444433 2222211 11122233345555667
Q ss_pred hHhhhCChhhHHHHHHHHHHHHhcC-CCCCCCC
Q psy7224 91 LSDVTGNPIYREKVEKIRSVISSIE-KPNGLYP 122 (297)
Q Consensus 91 LS~lTgd~~y~~~a~~~~~~l~~~~-~~~gL~p 122 (297)
+.+.|||++|.+.|.++.+.+.+.- ...|++.
T Consensus 127 ~y~~tg~~~~l~~A~~~~~~i~~~~~d~~g~~~ 159 (388)
T 2gz6_A 127 YALASGEEWAKDVAMQAYNNVLRRKDNPKGKYT 159 (388)
T ss_dssp HHHHHCCHHHHHHHHHHHHHHHTC---------
T ss_pred HHHHhCCHHHHHHHHHHHHHHHHHhcCCCcccC
Confidence 7899999999999999999887642 2345543
No 21
>1nc5_A Hypothetical protein YTER; structural genomics, helix barrel, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 1.60A {Bacillus subtilis} SCOP: a.102.1.6 PDB: 2d8l_A* 2gh4_A*
Probab=96.34 E-value=0.003 Score=59.55 Aligned_cols=98 Identities=14% Similarity=0.109 Sum_probs=66.5
Q ss_pred hhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceee-hhhhHhhhC
Q psy7224 18 GAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLE-FVYLSDVTG 96 (297)
Q Consensus 18 GGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LE-f~~LS~lTg 96 (297)
=+|+.+|++++|+.+++.|+++++.|...|+++.|--+.. .+.+ ...|. +.--+.++ +.+++++||
T Consensus 94 ~~ll~lY~~Tgd~~yl~~a~~la~~l~~~~r~~~G~fw~~----~~~~-~~~w~--------D~l~m~~p~L~~l~~~tg 160 (373)
T 1nc5_A 94 LILFPLYEQTKDERYVKAAKRLRSLYGTLNRTSEGGFWHK----DGYP-YQMWL--------DGLYMGGPFALKYANLKQ 160 (373)
T ss_dssp GGHHHHHHHHCCHHHHHHHHHHHGGGGTSCBCTTSCBCSC----TTST-TEEET--------HHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHhccCCCCCCeecc----CCCC-CeEEe--------CcHHHHHHHHHHHHHHHC
Confidence 3678999999999999999999999998888777643321 1111 11121 11001222 467999999
Q ss_pred ChhhHHHHHHHHHHHHhc--CCCCCCCCccccCC
Q psy7224 97 NPIYREKVEKIRSVISSI--EKPNGLYPNYLNPK 128 (297)
Q Consensus 97 d~~y~~~a~~~~~~l~~~--~~~~gL~p~~i~~~ 128 (297)
|++|.+.|.+..+...+. .+..||+-.-++..
T Consensus 161 d~~y~d~A~~~~~~~~~~l~D~~tGl~~h~~~~~ 194 (373)
T 1nc5_A 161 ETELFDQVVLQESLMRKHTKDAKTGLFYHAWDEA 194 (373)
T ss_dssp CTHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETT
T ss_pred CHHHHHHHHHHHHHHHHHhcCCCCCCEEeecCCc
Confidence 999999999877765542 25678876555544
No 22
>3pmm_A Putative cytoplasmic protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics; 1.90A {Klebsiella pneumoniae subsp} PDB: 3qwt_A
Probab=96.01 E-value=0.0074 Score=57.31 Aligned_cols=104 Identities=13% Similarity=0.094 Sum_probs=66.1
Q ss_pred hhhhhhhhhhccCCCchHHHHHHHHHHHHhccc-CCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeeh-hhhH
Q psy7224 15 RFIGAILTLYSFTGDPMYRDKAVHIADKMLPAF-KTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEF-VYLS 92 (297)
Q Consensus 15 R~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF-~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf-~~LS 92 (297)
.....|+-+|.+|+|+.+++.|+++|+.|+.-+ +++.|--.... .+.. . ......+.--+.++| ..++
T Consensus 114 ~~~~~l~~lY~~Tgd~~Yl~~a~~~ad~L~~~~~r~~~Ggf~~~~---~~~~-~------~~~~WiDgl~M~~p~La~~~ 183 (382)
T 3pmm_A 114 APFLTLAYRFEETGRMAYLPWLESWAEWAMHEMPRTEQGGMQHMT---LAEE-N------HQQMWDDTLMMTVLPLAKIG 183 (382)
T ss_dssp TTHHHHHHHHHHHCCGGGHHHHHHHHHHHHHTSCBCGGGCBCCCC---SSCC-C------TTEEETTHHHHTHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhhCCCCcCCCeeeec---CCCC-C------CCcEEecchhhhHHHHHHHH
Confidence 445578999999999999999999999998644 46665433211 0000 0 111122322244444 5699
Q ss_pred hhhCChhhHHHHHHHHHHHHh-cC-CCCCCCCccccCC
Q psy7224 93 DVTGNPIYREKVEKIRSVISS-IE-KPNGLYPNYLNPK 128 (297)
Q Consensus 93 ~lTgd~~y~~~a~~~~~~l~~-~~-~~~gL~p~~i~~~ 128 (297)
++|||++|.+.|.+-+....+ .. +..||+---++..
T Consensus 184 ~~tgd~~y~d~A~~q~~~~~~~l~D~~tGl~~h~~~~~ 221 (382)
T 3pmm_A 184 KLLNRPQYVEEATYQFLLHVQNLMDRETGLWFHGWNYE 221 (382)
T ss_dssp HHTTCHHHHHHHHHHHHHHHHHHBCTTTSCBCSEEETT
T ss_pred HHHCCHHHHHHHHHHHHHHHHHccCCCCCCeeeeccCC
Confidence 999999999988775554443 33 4667776655433
No 23
>2ahf_A Unsaturated glucuronyl hydrolase; alpha6/alpha6 barrel, glycoside hydrolase family 88; 1.52A {Bacillus SP} PDB: 2ahg_A* 2fv0_A* 2fv1_A* 2d5j_A 1vd5_A 2fuz_A
Probab=95.73 E-value=0.0084 Score=56.95 Aligned_cols=89 Identities=11% Similarity=0.114 Sum_probs=61.4
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhC
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTG 96 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTg 96 (297)
+=||+..|+.++|+.+|+.|+++++.++.-| ...|+|+-..+... .+.++ ..+ +-.+-...=+.+|+++|+
T Consensus 227 i~gl~~ly~~T~d~~yL~~A~~la~~~l~~~-~~d~~pywd~~~~~-~~~~~-----~d~--Sa~aiaA~~Ll~L~~~~~ 297 (377)
T 2ahf_A 227 IYGFALNSRYLGNADLLETAKRMARHFLARV-PEDGVVYWDFEVPQ-EPSSY-----RDS--SASAITACGLLEIASQLD 297 (377)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHHHHHHTTC-CTTSSCBSBTTSCC-CTTSC-----BCH--HHHHHHHHHHHHHHHTSC
T ss_pred HHHHHHHHHHHCChHHHHHHHHHHHHHHHhh-HHhCCcccccCCCc-cCCCc-----cCC--CHHHHHHHHHHHHHHhcC
Confidence 4589999999999999999999999999988 34688864443321 11111 111 111112223566888896
Q ss_pred -----ChhhHHHHHHHHHHHHhc
Q psy7224 97 -----NPIYREKVEKIRSVISSI 114 (297)
Q Consensus 97 -----d~~y~~~a~~~~~~l~~~ 114 (297)
+++|.+.|.++.+.+...
T Consensus 298 ~~~~~~~~Y~~~A~~~l~~l~~~ 320 (377)
T 2ahf_A 298 ESDPERQRFIDAAKTTVTALRDG 320 (377)
T ss_dssp TTCHHHHHHHHHHHHHHHHHHHH
T ss_pred ccccchHHHHHHHHHHHHHHHHH
Confidence 788999999999988654
No 24
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=95.73 E-value=0.0079 Score=58.39 Aligned_cols=181 Identities=16% Similarity=0.165 Sum_probs=105.3
Q ss_pred hhhhhhhhhccCCCchHHHHHHHHHHHHh---cccC----CCCCC--cccceeecCCCCCCCCcCCCCcceeccccccee
Q psy7224 16 FIGAILTLYSFTGDPMYRDKAVHIADKML---PAFK----TPTGI--PHALINVYTGDSKNYAWASGSASILSELGTLHL 86 (297)
Q Consensus 16 ~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll---~AF~----tp~gi--P~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~L 86 (297)
.+.||+-||..+||+.+++.|++-.+.|. |.|+ ...++ |+... .. ...|-+.|.+.+
T Consensus 87 ~l~gl~~ay~~Tgd~kY~~ya~~~~dfi~~~~p~~~~~~~~~G~l~~~~r~~-~~-------------~~~LDD~g~~~~ 152 (445)
T 3k11_A 87 TYSALIAAAETTGDKRYTDYVQNRFRFLAEVAPHFKRVYEEKGKTDSQLLQI-LT-------------PHALDDAGAVCT 152 (445)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHH-HS-------------CCSGGGTHHHHH
T ss_pred HHHHHHHHHHHHCCHHHHHHHHHHHHHHHhccchhhhhhhccCCeecccccc-cC-------------CCcchhHHHHHH
Confidence 47899999999999999999988887664 4331 10111 12111 00 113566788888
Q ss_pred ehhhhHhhhCChhhHHHHHHHHHHHHhcC--CCCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCC
Q psy7224 87 EFVYLSDVTGNPIYREKVEKIRSVISSIE--KPNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEG 164 (297)
Q Consensus 87 Ef~~LS~lTgd~~y~~~a~~~~~~l~~~~--~~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~ 164 (297)
-+..+-+.|+|++|.+.|....+.|.... ...|-+--. ++.
T Consensus 153 ~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~-~~~------------------------------------ 195 (445)
T 3k11_A 153 AMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARN-RPQ------------------------------------ 195 (445)
T ss_dssp HHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC-SSS------------------------------------
T ss_pred HHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeec-CCC------------------------------------
Confidence 88899999999999999999988776532 223322110 000
Q ss_pred CccccccchhhhhhhcccccccCCChhhhhhhhhhhhhcCCCC--chhhhHHHHHHHHHhhccccccccccccccCCCCC
Q psy7224 165 PESFKFTDTLEAKAYRSQDKYYILRPEVIESYFYLWRVTKDPK--YREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRR 242 (297)
Q Consensus 165 PE~~~~~~~~~~~~~~~~~~~y~lRPE~iES~fyl~r~T~d~~--yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~ 242 (297)
|..+ | .|.-|. ...-++.+.++|||++ |.+.|.+-+....++......--+.|.... +..
T Consensus 196 ~~q~-W-----------iD~lyM----~~pfla~~~~~tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~--~~~ 257 (445)
T 3k11_A 196 RNTL-W-----------LDDMFM----GIPAVAQMSRYDKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVE--SST 257 (445)
T ss_dssp TTEE-E-----------THHHHH----HHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEET--TCS
T ss_pred CCce-E-----------ecchhh----HHHHHHHHHHHHCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecC--CCC
Confidence 0001 0 011111 2233456678899999 988888776666665543321111121111 111
Q ss_pred CCCCCCCC-CCcchh-hHHhhhhHH
Q psy7224 243 GHSGSIFG-SAELGM-TIIDGLDTL 265 (297)
Q Consensus 243 d~~~Sf~~-~~~~~~-tl~eTLkyL 265 (297)
...+++|+ +++|++ .++|+|++|
T Consensus 258 ~~~~~~WaRGnGW~~~gl~~~l~~l 282 (445)
T 3k11_A 258 DHPAFCWARANGWALLTACELLDVL 282 (445)
T ss_dssp SCCCCCBHHHHHHHHHHHHHHHHHS
T ss_pred CCCcceecccchHHHHHHHHHHHhc
Confidence 23356775 235653 788888874
No 25
>2zzr_A Unsaturated glucuronyl hydrolase; alpha barrel; 1.75A {Streptococcus agalactiae} PDB: 3anj_A 3ank_A* 3ani_A*
Probab=95.54 E-value=0.014 Score=55.82 Aligned_cols=89 Identities=10% Similarity=-0.060 Sum_probs=60.9
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhC
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTG 96 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTg 96 (297)
+=||+..|..|+|+.+|+.|++|++.++.-|. ..|+|+-...... .+..+ ..+ +-.+-...=+.+|+++|+
T Consensus 252 i~gl~~lY~~T~d~~yL~~A~~la~~~l~~~~-~d~~pywdt~~~~-~~~~~-----~D~--Sa~aiaA~~Ll~L~~~~~ 322 (397)
T 2zzr_A 252 IYGIPLSYRKMKDYQQIILFKGMTNYFLNRLP-EDKVSYWDLIFTD-GSGQP-----RDT--SATATAVCGIHEMLKYLP 322 (397)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHHTCC-TTSCCBSBTTCCT-TSCCC-----BCH--HHHHHHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHCCHHHHHHHHHHHHHHHHhhH-HhCCccccCCCCC-CCCCc-----CCC--CHHHHHHHHHHHHHHhcC
Confidence 45889999999999999999999999998883 3577764332221 11111 111 111112223566889998
Q ss_pred C---hh--hHHHHHHHHHHHHhc
Q psy7224 97 N---PI--YREKVEKIRSVISSI 114 (297)
Q Consensus 97 d---~~--y~~~a~~~~~~l~~~ 114 (297)
+ .+ |.+.|.++.+.+...
T Consensus 323 ~~~~~~~~Y~~~A~~~l~~l~~~ 345 (397)
T 2zzr_A 323 EVDPDKETYKYAMHTMLRSLIEQ 345 (397)
T ss_dssp TTCTTHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhHHHHHHHHHHHHHHHHH
Confidence 8 88 999999999988764
No 26
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=91.57 E-value=0.33 Score=47.09 Aligned_cols=189 Identities=15% Similarity=0.220 Sum_probs=101.7
Q ss_pred HHHHHHHHHHHHhcccCC------CCCCcccceeecCCCCCCCCcCCCCcceecccccce---eehhhhHhhhCChhhHH
Q psy7224 32 YRDKAVHIADKMLPAFKT------PTGIPHALINVYTGDSKNYAWASGSASILSELGTLH---LEFVYLSDVTGNPIYRE 102 (297)
Q Consensus 32 lL~kA~~lad~Ll~AF~t------p~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~---LEf~~LS~lTgd~~y~~ 102 (297)
+|+.-.+.+|.++..... ||.+-..-++..++++..+.+..+....++-+.|-| ==+..||.+||||+|.+
T Consensus 2 ~L~~v~~y~d~vl~~~~s~~~g~~~TPLlADG~D~~t~~pV~W~~pdg~~~~iSNfAsQQN~lR~L~~LS~lTgd~~Y~q 81 (543)
T 2v8i_A 2 RLTVVKQYVDNVLNKASDTYHGDKPSPLLADGVDPRTGQQLEWIFPDGRRAVLSNFSAQQNLMRVMSGLSQLSGDPRYQK 81 (543)
T ss_dssp HHHHHHHHHHHHHHHTBCCSSTTSCCSCBCSEECTTTCCBCEEECTTSCEEEEECGGGCHHHHHHHHHHHHHHCCTHHHH
T ss_pred hHHHHHHHHHHHHHhccCcccCCCCCceeccccccCCCCceeeeCCCCCccccccHHHHHHHHHHHHHHhhccCCHHHHH
Confidence 455566777777755443 444555677777776654333344555666666533 22345999999999999
Q ss_pred HHHHHHHHHHhc-CCCCCCCC----ccccCCCCccccc--eeee--cCCchhHHHHHHHH-------HH-----------
Q psy7224 103 KVEKIRSVISSI-EKPNGLYP----NYLNPKTGHWGQS--HISM--GALGDSFYEYLLKA-------WI----------- 155 (297)
Q Consensus 103 ~a~~~~~~l~~~-~~~~gL~p----~~i~~~~g~~~~~--~~~~--Ga~~DS~yEYLlK~-------~~----------- 155 (297)
.|..+.+.+... ....||+- .+||.+|.+-.+. .-.+ =...-.|||.|... +|
T Consensus 82 ~A~~~~~yf~dh~vd~sGL~~WGGHrFi~L~tl~~eGP~~K~~VHELKhh~PyY~lm~~vdp~aT~rfi~afWnAHV~DW 161 (543)
T 2v8i_A 82 RAEDIVRYHFQNYQDPSGLLYWGGHRFVDLKTLQPEGPSEKEMVHELKNAYPYYDLMFSVDSDATARFIRGFWNAHVYDW 161 (543)
T ss_dssp HHHHHHHHHHHHSBCTTSCBSCSTTCEEETTTCCEECCCTTCCSBCCSSCCCCHHHHHHHCHHHHHHHHHHHHHHHEEET
T ss_pred HHHHHHHHHHHcccCCCCceeecCceeEeccccCccCccccchhhHhhhcCchHHHHHHcCHHHHHHHHHHHHHHHhhhh
Confidence 999988865443 45667752 2455444332110 0000 01233588876543 11
Q ss_pred ---hhCCCCCC----CCccccccchhhhhhhccccc--ccCCChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHh
Q psy7224 156 ---QSNKEDTE----GPESFKFTDTLEAKAYRSQDK--YYILRPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHA 222 (297)
Q Consensus 156 ---l~g~~~~~----~PE~~~~~~~~~~~~~~~~~~--~y~lRPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~ 222 (297)
-+|+-... +|-.|. ++ ..-.......+ -..---++|=|.+.+++.|||..-..||....+.+..+
T Consensus 162 ~~Ld~~RHG~Y~k~~~~~~f~-dp-~~~p~l~etkGLTFvNaG~DLiYaA~~l~~~~gd~~a~~W~k~L~~QYVla 235 (543)
T 2v8i_A 162 RILETSRHGEYGKPMGALWES-KF-EQQPPFFATKGLSFLNAGNDLIYSASLLYKHQQDQGALTWAKRLADQYVLP 235 (543)
T ss_dssp TTTEECSCBCTTCCCCCGGGS-CC-CCCCTTEEESSCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHTTTT
T ss_pred hhcccccCCCCCCCCCchhcc-Cc-ccCCCccccCCceEeecCcHHHHHHHHHHHhCCchHHHHHHHHHHHHHhhc
Confidence 01111110 222221 00 00000000000 00001257888999999999999999999888877654
No 27
>3k11_A Putative glycosyl hydrolase; structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MSE MES; 1.80A {Bacteroides thetaiotaomicron vpi-5482}
Probab=91.07 E-value=0.17 Score=49.03 Aligned_cols=98 Identities=12% Similarity=0.030 Sum_probs=64.2
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCCcceecccccceeeh-hhhHhh
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEF-VYLSDV 94 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf-~~LS~l 94 (297)
+=+|+-+|.+++|+.+++.|.++||.|+.-|. ++.|..+.. ... .+..| .+.=-+.+.| ..++++
T Consensus 151 ~~~Li~lY~~T~d~~yl~~a~~~ad~L~~~~pRt~~Ggf~h~----~~~-~~q~W--------iD~lyM~~pfla~~~~~ 217 (445)
T 3k11_A 151 CTAMIKLRLKDESLPVDGLIQNYFDFIINKEYRLADGTFARN----RPQ-RNTLW--------LDDMFMGIPAVAQMSRY 217 (445)
T ss_dssp HHHHHHHHHHCTTCCCHHHHHHHHHHHHHTSCBCTTCCBCBC----SSS-TTEEE--------THHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCHHHHHHHHHHHHHHHHcCCCCCCCceeec----CCC-CCceE--------ecchhhHHHHHHHHHHH
Confidence 35689999999999999999999999998884 777765531 110 11123 2221223333 348999
Q ss_pred hCChh--hHHHHHHHHHHHHh-c-CCCCCCCCccccC
Q psy7224 95 TGNPI--YREKVEKIRSVISS-I-EKPNGLYPNYLNP 127 (297)
Q Consensus 95 Tgd~~--y~~~a~~~~~~l~~-~-~~~~gL~p~~i~~ 127 (297)
|||++ |.+.|.+-+....+ . .+..||+--.++.
T Consensus 218 tgd~~~~y~d~A~~q~~~~~~~l~D~~tGL~~Hg~~~ 254 (445)
T 3k11_A 218 DKEAKNKYLAEAVKQFLQFADRMFIPEKGLYRHGWVE 254 (445)
T ss_dssp CGGGHHHHHHHHHHHHHHHHHHHEETTTTEECSEEET
T ss_pred HCCcchHHHHHHHHHHHHHHHhcccCCCCCEeeeecC
Confidence 99999 98888775554433 2 2456776555543
No 28
>2zbl_A Putative isomerase; N-acyl-D-glucosamine 2-epimerase protein family; HET: BMA; 1.60A {Salmonella typhimurium} PDB: 2afa_A 2rgk_A*
Probab=89.43 E-value=0.9 Score=43.01 Aligned_cols=153 Identities=18% Similarity=0.133 Sum_probs=95.6
Q ss_pred hhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCC--CCCcccceeecCCCCCCCCcCCCCcceecccccceeehh
Q psy7224 12 TTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTP--TGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFV 89 (297)
Q Consensus 12 ttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp--~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~ 89 (297)
.|-|.+=++..||. ++++.+++.|+...+.|...+-.+ .|+- ..++ ..|.+.. +..+=+-+-+..=+.
T Consensus 52 ~nar~i~~~a~a~~-~g~~~~l~~A~~~~~fl~~~~~D~~~GG~~-~s~d-~dg~~~~-------~k~lyd~Af~i~al~ 121 (421)
T 2zbl_A 52 ITARMLHVYSVAAS-MGRPGAYDLVDHGIKAMNGALRDKKYGGWY-ACVN-DQGVVDA-------SKQGYQHFFALLGAA 121 (421)
T ss_dssp HHHHHHHHHHHHHH-TTCTTHHHHHHHHHHHHTTTTBCTTTSSBC-SEEE-TTEEEEC-------CEEHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH-cCChhHHHHHHHHHHHHHHhccCcCCCeEE-EEeC-CCCCcCC-------chhHHHHHHHHHHHH
Confidence 56788888888887 899999999999999998766433 2443 2332 2221110 011111111122222
Q ss_pred hhHhhhCChhhHHHHHHHHHHHHhcC-C-CCCCCCccccCCCCccccceeeecCCchhHHHHHHHHHHhhCCCCCCCCcc
Q psy7224 90 YLSDVTGNPIYREKVEKIRSVISSIE-K-PNGLYPNYLNPKTGHWGQSHISMGALGDSFYEYLLKAWIQSNKEDTEGPES 167 (297)
Q Consensus 90 ~LS~lTgd~~y~~~a~~~~~~l~~~~-~-~~gL~p~~i~~~~g~~~~~~~~~Ga~~DS~yEYLlK~~~l~g~~~~~~PE~ 167 (297)
. .++||++.|.+.|..+.+.+.+.- . ..|++-...+..... .. + .
T Consensus 122 ~-~~~tg~~~~l~~a~~~~~~l~~~~~d~~~Ggf~~~~d~d~~~-~~-----~---------------------~----- 168 (421)
T 2zbl_A 122 S-AVTTGHPEARKLLDYTIEVIEKYFWSEEEQMCLESWDEAFSQ-TE-----D---------------------Y----- 168 (421)
T ss_dssp H-HHTTTCTTHHHHHHHHHHHHHHHTEETTTTEECCEECTTSCS-BC-----S---------------------C-----
T ss_pred H-HHHhCCccHHHHHHHHHHHHHHHhccCCCCCeeeeecCCCCc-cc-----c---------------------c-----
Confidence 3 488999999999999998887632 2 256555555443210 00 0 0
Q ss_pred ccccchhhhhhhcccccccCCCh--hhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcc
Q psy7224 168 FKFTDTLEAKAYRSQDKYYILRP--EVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDN 225 (297)
Q Consensus 168 ~~~~~~~~~~~~~~~~~~y~lRP--E~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~ 225 (297)
. ..-+ -.+|.+--++++|||+.|.+.|.++.+.+......
T Consensus 169 ------------~------~~n~~m~~~~al~~l~~~tgd~~~~~~A~~~~~~~~~~~~~ 210 (421)
T 2zbl_A 169 ------------R------GGNANMHAVEAFLIVYDVTHDKKWLDRALRIASVIIHDVAR 210 (421)
T ss_dssp ------------E------EHHHHHHHHHHHHHHHHTTCCTHHHHHHHHHHHHHCCCCCG
T ss_pred ------------C------CCcHHHHHHHHHHHHHHhhCCHHHHHHHHHHHHHHHHHhcc
Confidence 0 0001 14788888999999999999999999998865543
No 29
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=87.71 E-value=1.4 Score=41.03 Aligned_cols=102 Identities=16% Similarity=0.165 Sum_probs=64.5
Q ss_pred hhhhhccCCCchHHHHHHHHHHHH-h-cccCCC-CCCcccceeecCCCCCCCCcCCCCcce---ecccccceeehhhhHh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKM-L-PAFKTP-TGIPHALINVYTGDSKNYAWASGSASI---LSELGTLHLEFVYLSD 93 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~L-l-~AF~tp-~giP~~~vn~~~g~~~~~~~~~~~~~~---lAe~gs~~LEf~~LS~ 93 (297)
|+-|+.+++|+.++++|+++++.+ + ..++.. .|+.+ .++. .|.+...-.. .... .||+ ..=+..|-+
T Consensus 256 L~~a~~~~~~~~~l~~A~~~~~~~~~~~~~d~~~gg~~~-~~~~-~g~~~~~l~d--~~~~~W~qaea---~~a~l~ly~ 328 (402)
T 1fp3_A 256 LLRHSSRSGDAKLRAHVIDTFLLLPFRSGWDADHGGLFY-FQDA-DGLCPTQLEW--AMKLWWPHSEA---MIAFLMGYS 328 (402)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHTHHHHHHHBCTTTCSBCS-CEET-TSCCCSSTTT--TCEEHHHHHHH---HHHHHHHHH
T ss_pred HHHHHHHcCChHHHHHHHHHHHHHHHHHhccCCCCCEEE-eecC-CCCccccCcC--CCcCcHHHHHH---HHHHHHHHH
Confidence 788899999999999999999999 5 456644 34433 2222 2332110000 0000 1121 223666889
Q ss_pred hhCChhhHHHHHHHHHHHHhcC--CCCCCCCccccCC
Q psy7224 94 VTGNPIYREKVEKIRSVISSIE--KPNGLYPNYLNPK 128 (297)
Q Consensus 94 lTgd~~y~~~a~~~~~~l~~~~--~~~gL~p~~i~~~ 128 (297)
+|||++|.+.|.++.+.+.+.- ...|.+-..+++.
T Consensus 329 ~tgd~~yl~~a~~~~~~~~~~f~D~~~G~w~~~~~~~ 365 (402)
T 1fp3_A 329 ESGDPALLRLFYQVAEYTFRQFRDPEYGEWFGYLNRE 365 (402)
T ss_dssp HHCCHHHHHHHHHHHHHHHHHTBCTTTSSBCCEECTT
T ss_pred HhCCHHHHHHHHHHHHHHHHhCcCCCCCceEeeECCC
Confidence 9999999999999998876532 3467666666654
No 30
>3k7x_A LIN0763 protein; Q92DQ0, LKR23, NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 1.89A {Listeria innocua}
Probab=86.61 E-value=0.36 Score=44.99 Aligned_cols=102 Identities=17% Similarity=0.168 Sum_probs=65.9
Q ss_pred hhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeec-CCCCCC-CCcCCCCcceecccccceeehh
Q psy7224 12 TTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVY-TGDSKN-YAWASGSASILSELGTLHLEFV 89 (297)
Q Consensus 12 ttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~-~g~~~~-~~~~~~~~~~lAe~gs~~LEf~ 89 (297)
+|-..+-.+..+|.+++|+.+|+.|+++.+-+..-+-.|+|.-+..++.. .|...+ ..|+ =..|.+.-=+.
T Consensus 151 sN~~~~~~la~l~~~tgd~~Yl~~A~~~~~w~~~~l~d~~g~v~Dg~~~~~~g~~~~~~~~t-------Ynqg~~l~g~~ 223 (349)
T 3k7x_A 151 VNAPFIILSCWLYNELNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGTIDYEWKFT-------YNQGVYIGANL 223 (349)
T ss_dssp HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHBCTTSCBCCEECTTSSSCBCTTCCCH-------HHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHhcCCCCCCeEecCCccCCCCccCCcCeee-------HHHHHHHHHHH
Confidence 45566667778899999999999999999999865544556534333211 111110 1121 12344444566
Q ss_pred hhHhhhCChhhHHHHHHHHHHHHhcCCCCCC
Q psy7224 90 YLSDVTGNPIYREKVEKIRSVISSIEKPNGL 120 (297)
Q Consensus 90 ~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL 120 (297)
.|-+.|||++|.+.|.++.+.+.+.-...|+
T Consensus 224 ~LY~~T~d~~yl~~a~~l~~~~~~~f~~~gi 254 (349)
T 3k7x_A 224 ELYRITKEAIYLDTANKTAAISLKELTEDGI 254 (349)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHHHHEETTE
T ss_pred HHHHhhCcHHHHHHHHHHHHHHHHHhccCCc
Confidence 7999999999999999998866543223454
No 31
>1fp3_A N-acyl-D-glucosamine 2-epimerase; alpha/alpha-barrel, isomer; 2.00A {Sus scrofa} SCOP: a.102.1.3
Probab=74.80 E-value=3.2 Score=38.56 Aligned_cols=101 Identities=17% Similarity=0.125 Sum_probs=65.3
Q ss_pred hhhhhhhhhhhhccC---CCchHHHHHHHHHHHHhccc-CCCC--CCcccceeecCCCCCCCCcCCCCcceeccccccee
Q psy7224 13 TIRFIGAILTLYSFT---GDPMYRDKAVHIADKMLPAF-KTPT--GIPHALINVYTGDSKNYAWASGSASILSELGTLHL 86 (297)
Q Consensus 13 tIR~LGGLLSAy~Ls---~d~~lL~kA~~lad~Ll~AF-~tp~--giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~L 86 (297)
|-|.|=.+..||.+. +++.+|+.|+...+.|...+ |... |+- ..++ ..|.+.. ....+=+-+-+.+
T Consensus 58 nar~l~~~a~a~~~~~~~~~~~~l~~A~~~~~fl~~~~~d~~gg~g~~-~s~d-~dg~~~~------~~~~lyd~af~~~ 129 (402)
T 1fp3_A 58 QGRQVWMYCRLYRKLERFHRPELLDAAKAGGEFLLRHARVAPPEKKCA-FVLT-RDGRPVK------VQRSIFSECFYTM 129 (402)
T ss_dssp HHHHHHHHHHHHHHCGGGCCHHHHHHHHHHHHHHHHHTBSSTTSCCBC-SEEC-TTSCEEE------CCSSSHHHHHHHH
T ss_pred hHHHHHHHHHHHHHhcccCCHHHHHHHHHHHHHHHHhccCcCCCCceE-EEEC-CCCCccc------cccchHHHHHHHH
Confidence 445577787888876 99999999999999999875 4443 433 3332 2232110 0111112233445
Q ss_pred ehhhhHhhhCChhhHHHHHHHHHHHHhc-C-CCCCCC
Q psy7224 87 EFVYLSDVTGNPIYREKVEKIRSVISSI-E-KPNGLY 121 (297)
Q Consensus 87 Ef~~LS~lTgd~~y~~~a~~~~~~l~~~-~-~~~gL~ 121 (297)
-+..+.+.|||+.|.+.|.++.+.+.+. . ...|++
T Consensus 130 a~~~~~~atgd~~~~~~A~~l~~~~~~~~~d~~~G~f 166 (402)
T 1fp3_A 130 AMNELWRVTAEARYQSEAVDMMDQIVHWVREDPSGLG 166 (402)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHTCGGGGC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHHhccCCCccc
Confidence 5777899999999999999988866543 2 345665
No 32
>2v8i_A Pectate lyase; periplasm, beta-elimination, pectin degradation; 1.50A {Yersinia enterocolitica} PDB: 2v8k_A* 2v8j_A
Probab=62.24 E-value=7.7 Score=37.69 Aligned_cols=99 Identities=23% Similarity=0.311 Sum_probs=68.7
Q ss_pred cCccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHH-hcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccce
Q psy7224 7 LSVFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKM-LPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLH 85 (297)
Q Consensus 7 vsvFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~L-l~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~ 85 (297)
+.-|..---||=-++-||-+|+|+.|...|..++.++ +-.++++.|- -..||..+... + -=+.
T Consensus 369 l~~~p~~~~yll~~vra~~~s~D~~Lw~~~~~ma~~~~lgdi~~~~~~-~~~~~~~~~~~--------------s-p~lL 432 (543)
T 2v8i_A 369 LKPYKAGNEFLISYARAYAIDNDPLLWKVARGIANDQGLGDIGTAPGK-EVKVNMDTTNS--------------D-PYAL 432 (543)
T ss_dssp ECCEECCHHHHHHHHHHHHHSCCHHHHHHHHHHHHHTTCEECTTBTTB-SCEECTTCCCC--------------C-HHHH
T ss_pred eccccCCchhhHHHHHHHHcCCCHHHHHHHHHHHhhCCccccCCCcCc-ccccccCCCCc--------------C-HHHH
Confidence 3445555557777899999999999999999999887 4556654332 22233332111 1 0133
Q ss_pred eehhhhHhhhCChhhHHHHHHHHHHHHhcCCCCCCC
Q psy7224 86 LEFVYLSDVTGNPIYREKVEKIRSVISSIEKPNGLY 121 (297)
Q Consensus 86 LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~~~~gL~ 121 (297)
+-..-|.+.|++++|...|.++-+.|.++....|||
T Consensus 433 ~allEL~~atq~~~~l~lA~~~g~nl~~~~~~~G~F 468 (543)
T 2v8i_A 433 FALLDLYHASQVADYRKLAEKIGDNIIKIRYIDGFF 468 (543)
T ss_dssp HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEE
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHhhcCcee
Confidence 445668999999999999999999888766677775
No 33
>2b4j_C PC4 and SFRS1 interacting protein; HIV, integration, transcription, viral protein, recombinatio; 2.02A {Homo sapiens} SCOP: a.48.4.1 PDB: 3f9k_C 3hpg_G 3u88_C* 3hph_E
Probab=56.71 E-value=4.7 Score=30.80 Aligned_cols=49 Identities=12% Similarity=-0.070 Sum_probs=32.4
Q ss_pred ChhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhcccccccccccccc
Q psy7224 189 RPEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELK 237 (297)
Q Consensus 189 RPE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~ 237 (297)
-||.++.+==++|..|++..|+.|-.+++.|+.-+..+.|...+.++++
T Consensus 49 npe~V~t~kklRry~g~q~Ir~kA~~iY~kfK~~f~~~eg~~~~~~~~~ 97 (98)
T 2b4j_C 49 HTEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVLN 97 (98)
T ss_dssp THHHHHHHHHHTTCTTCHHHHHHHHHHHHHHHHC---------------
T ss_pred ChHHHHHHHHHHHHhchHHHHHHHHHHHHHHHHHHhcCCCchHHHHHhc
Confidence 3899999999999999999999999999999999888888777766653
No 34
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=50.37 E-value=24 Score=33.05 Aligned_cols=83 Identities=11% Similarity=0.036 Sum_probs=54.8
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCC-CcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCCh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTG-IPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNP 98 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~g-iP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~ 98 (297)
|+.++..++++.+++.+++..+.++.-+.. +| .|...- .+......|. .|. +.+ .+=+..+.+.++|+
T Consensus 240 Ll~~~~~~~~~~~~~~i~~~l~~l~~~~~~-~g~wp~~~~---~~~~~~~~wC-hG~---~Gi---~~~l~~~~~~~~~~ 308 (411)
T 3e6u_A 240 LMQPSLQVSQGKLHSLVKPSVDYVCQLKFP-SGNYPPCIG---DNRDLLVHWC-HGA---PGV---IYMLIQAYKVFREE 308 (411)
T ss_dssp HTCGGGCCCHHHHHHTHHHHHHHHHHTCCT-TSCCCSBTT---CCCCCCCSSS-SSH---HHH---HHHHHHHHHHHCCH
T ss_pred HHHHHhhcChHHHHHHHHHHHHHHHHhhcc-CCCCCCCCC---cccCcccccc-CCc---HHH---HHHHHHHHHHcCCH
Confidence 566777788899999999999999876653 34 333211 1122234565 231 222 22256677899999
Q ss_pred hhHHHHHHHHHHHHh
Q psy7224 99 IYREKVEKIRSVISS 113 (297)
Q Consensus 99 ~y~~~a~~~~~~l~~ 113 (297)
+|.+.|.++.+.+++
T Consensus 309 ~~~~~a~~~~~~~~~ 323 (411)
T 3e6u_A 309 KYLCDAYQCADVIWQ 323 (411)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999888776
No 35
>3e6u_A LANC-like protein 1; alpha barrel, cytoplasm, signaling protein; 2.60A {Homo sapiens} PDB: 3e73_A*
Probab=44.39 E-value=13 Score=34.94 Aligned_cols=36 Identities=33% Similarity=0.354 Sum_probs=29.6
Q ss_pred hhhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCc
Q psy7224 19 AILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIP 54 (297)
Q Consensus 19 GLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP 54 (297)
.||.+|.+++|+.+++.|..+++.++..++...++|
T Consensus 343 ~ll~~~~~t~~~~~~~~A~~~~~~~~~~~~~~~~~~ 378 (411)
T 3e6u_A 343 AFLTLYNLTQDMKYLYRACKFAEWCLEYGEHGCRTP 378 (411)
T ss_dssp HHHHHHHHHCCHHHHHHHHHHHHHHTTTTSSCCCCC
T ss_pred HHHHHHHHhCCHHHHHHHHHHHHHHHHhccccCCCC
Confidence 478899999999999999999999987665444444
No 36
>1z9e_A PC4 and SFRS1 interacting protein 2; heat repeat-like, ledgf, protein binding/transcription complex; NMR {Homo sapiens} SCOP: a.48.4.1
Probab=44.14 E-value=17 Score=28.99 Aligned_cols=49 Identities=12% Similarity=-0.078 Sum_probs=34.7
Q ss_pred hhhhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccC
Q psy7224 190 PEVIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKP 238 (297)
Q Consensus 190 PE~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p 238 (297)
||+|+.+==++|..|++..|+.|-.++..|+.-+-...|...+.++.+.
T Consensus 50 pe~V~TlkklRrY~gnq~Ir~kA~~iY~kFK~lf~~geg~~fw~~~~~~ 98 (127)
T 1z9e_A 50 TEMITTLKKIRRFKVSQVIMEKSTMLYNKFKNMFLVGEGDSVITQVLNK 98 (127)
T ss_dssp HHHHHHHHHHTTCTTCSSHHHHHHHHHHHHHHHHHC-------------
T ss_pred hHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHhcCCCchHHHHHHHH
Confidence 8999999999999999999999999999999999877788888887764
No 37
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=42.97 E-value=22 Score=32.79 Aligned_cols=79 Identities=14% Similarity=0.086 Sum_probs=50.1
Q ss_pred CchHHHHHHHHHHHHhc-ccCCCCCCcccc--eee--------cCCCCCCCCcCCCCcceecccccceeehhhhHhhhCC
Q psy7224 29 DPMYRDKAVHIADKMLP-AFKTPTGIPHAL--INV--------YTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGN 97 (297)
Q Consensus 29 d~~lL~kA~~lad~Ll~-AF~tp~giP~~~--vn~--------~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd 97 (297)
++.+++.|++..+.++. .|+.++|.-++. +.. ........+|. +|. + | ..+=+..+.+.++|
T Consensus 225 ~~~~~~~~~~~~~~l~~~~~~~~~g~~wp~g~~~~~~~~~~~~~~~~~~~~~WC-hG~---~--G-i~~~l~~~~~~~~d 297 (409)
T 2g0d_A 225 NEASLSALQKIIFIYEKFELERKKQFLWKDGLVADELKKEKVIREASFIRDAWC-YGG---P--G-ISLLYLYGGLALDN 297 (409)
T ss_dssp CHHHHHHHHHHHHHHHHHCCCGGGTTCCCSEECHHHHHHTSCCSCCSCCCCCSS-SSH---H--H-HHHHHHHHHHHTTC
T ss_pred ChhHHHHHHHHHHHHHHHHhcCCCCCcCCCccccHhhhcccccccCCCCCCcCC-CCC---H--H-HHHHHHHHHHHcCC
Confidence 88999999999999854 455555532222 221 11122345665 231 1 2 23345567789999
Q ss_pred hhhHHHHHHHHHHHHhc
Q psy7224 98 PIYREKVEKIRSVISSI 114 (297)
Q Consensus 98 ~~y~~~a~~~~~~l~~~ 114 (297)
++|.+.|.++.+.+++.
T Consensus 298 ~~~~~~a~~~~~~~~~~ 314 (409)
T 2g0d_A 298 DYFVDKAEKILESAMQR 314 (409)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 99999999998887764
No 38
>2g0d_A Nisin biosynthesis protein NISC; alpha toroid, alpha barrel, biosynthetic protein; 2.21A {Lactococcus lactis subsp} SCOP: a.102.6.1 PDB: 2g02_A
Probab=42.00 E-value=20 Score=33.07 Aligned_cols=65 Identities=12% Similarity=0.083 Sum_probs=44.4
Q ss_pred hhhhhccCCCchHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh
Q psy7224 20 ILTLYSFTGDPMYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI 99 (297)
Q Consensus 20 LLSAy~Ls~d~~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~ 99 (297)
++.+|..++|+.+++.|++.++.++.- .+. ...+++ |=.-+|...+ |..+.+.|+|++
T Consensus 288 l~~~~~~~~d~~~~~~a~~~~~~~~~~----~~~-----------~~~~~L------CHG~aG~~~~-l~~l~~~~~~~~ 345 (409)
T 2g0d_A 288 YLYGGLALDNDYFVDKAEKILESAMQR----KLG-----------IDSYMI------CHGYSGLIEI-CSLFKRLLNTKK 345 (409)
T ss_dssp HHHHHHHTTCHHHHHHHHHHHHHHHHH----CTT-----------CCSCCT------TTSHHHHHHH-HHHHHHHHCCCT
T ss_pred HHHHHHHcCCHHHHHHHHHHHHHHHHh----ccC-----------CCCCCC------CChHHHHHHH-HHHHHHHhCCHH
Confidence 578888999999999999999988763 000 011111 1123343332 678899999999
Q ss_pred hHHHHHH
Q psy7224 100 YREKVEK 106 (297)
Q Consensus 100 y~~~a~~ 106 (297)
|.+.|.+
T Consensus 346 ~~~~a~~ 352 (409)
T 2g0d_A 346 FDSYMEE 352 (409)
T ss_dssp THHHHHH
T ss_pred HHHHHHH
Confidence 9888876
No 39
>1kwf_A Endoglucanase A; hydrolase, inverting glycosidase, atomic resolution, protein-carbohydrate interactions, reaction mechanism, cellulase; HET: BGC; 0.94A {Clostridium thermocellum} SCOP: a.102.1.2 PDB: 1is9_A 1cem_A
Probab=40.38 E-value=75 Score=29.39 Aligned_cols=109 Identities=13% Similarity=0.244 Sum_probs=69.4
Q ss_pred CccchhhhhhhhhhhhhccCCCc---hHHHHHHHHHHHHhcccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccc
Q psy7224 8 SVFETTIRFIGAILTLYSFTGDP---MYRDKAVHIADKMLPAFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTL 84 (297)
Q Consensus 8 svFEttIR~LGGLLSAy~Ls~d~---~lL~kA~~lad~Ll~AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~ 84 (297)
|--..=+++.=+||=|..+=+++ .++..|+.|.+.|+.-=-.| |.. .+.+.. . |.....++++- +
T Consensus 117 ~AtDgDl~IA~ALl~A~~~W~~~g~~~Y~~~A~~i~~~i~~~~~~~-~~~--~l~pg~--~----~~~~~~~npSY---~ 184 (363)
T 1kwf_A 117 AATDADEDIALALIFADKLWGSSGAINYGQEARTLINNLYNHCVEH-GSY--VLKPGD--R----WGGSSVTNPSY---F 184 (363)
T ss_dssp CBHHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHHHHHHBCT-TTC--CBCSBS--S----SCBTTBBCGGG---C
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHhccC-CCe--EEeccc--c----CCCCCEecchh---c
Confidence 34444478888888888887776 79999999999987532222 211 011111 0 11111222221 1
Q ss_pred eee-hhhhHhhhCChhhHHHHHHHHHHHHhcC---CCCCCCCccccCC
Q psy7224 85 HLE-FVYLSDVTGNPIYREKVEKIRSVISSIE---KPNGLYPNYLNPK 128 (297)
Q Consensus 85 ~LE-f~~LS~lTgd~~y~~~a~~~~~~l~~~~---~~~gL~p~~i~~~ 128 (297)
.+. |..+++.+|++.+.+.+++.++.|.+.. ...||.|..+...
T Consensus 185 ~p~~~~~fa~~~~~~~W~~~~~~~~~~l~~~~~~~~~tGL~PDw~~~~ 232 (363)
T 1kwf_A 185 APAWYKVYAQYTGDTRWNQVADKCYQIVEEVKKYNNGTGLVPDWCTAS 232 (363)
T ss_dssp CHHHHHHHHHHHCCTHHHHHHHHHHHHHHHHTTTSTTSCCCCSSBCTT
T ss_pred CHHHHHHHHHccCCchHHHHHHHHHHHHHHHhhhcCCCCCCCcceeec
Confidence 222 3678899999999999999999887754 4789999988743
No 40
>3eu8_A Putative glucoamylase; YP_210071.1, structural genomics, JOI for structural genomics, JCSG; 2.12A {Bacteroides fragilis nctc 9343}
Probab=37.79 E-value=58 Score=31.12 Aligned_cols=95 Identities=19% Similarity=0.243 Sum_probs=54.6
Q ss_pred CchHHHHHHHHHHHHhcccCCC-CCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChh----hHHH
Q psy7224 29 DPMYRDKAVHIADKMLPAFKTP-TGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPI----YREK 103 (297)
Q Consensus 29 d~~lL~kA~~lad~Ll~AF~tp-~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~----y~~~ 103 (297)
|..+|++-..=.=+-.-.|-+| +|+|..++....-.+.. ....++++.+| |.-+|.+.+-.. -.++
T Consensus 18 d~~~L~~~~r~T~~yF~~~~~p~~gL~~Dn~~~~~~~p~~----~a~~tS~tniG-----fgL~A~~vA~e~G~I~r~ea 88 (430)
T 3eu8_A 18 DDALMDTVQRRTFNYFWDAAEPNSGLARERYHMDGEYPAG----GPEIVTSGGSG-----FGIMAILAGIDRGYVSREEG 88 (430)
T ss_dssp HHHHHHHHHHHHHHHHHTSSCTTTCCCBSEEETTCCCTTS----CTTEEEHHHHH-----HHHHHHHHHHHTTSSCHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccCCcCCCCCCCccccCCCCCC----CCCccCCHHHH-----HHHHHHHHHHHcCCCCHHHH
Confidence 4556654433333333344444 79999887654211111 12345566666 444555444332 1233
Q ss_pred ---HHHHHHHHHhcCCCCCCCCccccCCCCcc
Q psy7224 104 ---VEKIRSVISSIEKPNGLYPNYLNPKTGHW 132 (297)
Q Consensus 104 ---a~~~~~~l~~~~~~~gL~p~~i~~~~g~~ 132 (297)
..++.+.|.+..+..|.++..+|.+||+.
T Consensus 89 ~~R~~~tL~~l~~~~r~~G~fyhwyD~~Tg~~ 120 (430)
T 3eu8_A 89 LRRMEKIVGFLEKADRFKGAYPHWWNGETGHV 120 (430)
T ss_dssp HHHHHHHHHHHHHSCCBTTBCCSEEETTTCCB
T ss_pred HHHHHHHHHHHHhchhcCCcCccccCCCCCCc
Confidence 44456666777788999999999999984
No 41
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=37.65 E-value=36 Score=33.87 Aligned_cols=84 Identities=13% Similarity=0.135 Sum_probs=51.5
Q ss_pred hhhhhhhhccCCCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhh
Q psy7224 17 IGAILTLYSFTGDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVT 95 (297)
Q Consensus 17 LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lT 95 (297)
+=|.+--|..|+|+.+|++|+++++.|..-|. .+.+-++ +.......+ +-+. -|..|--.+-+.+|.+++
T Consensus 309 ~WAA~eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~--w~~~d~~~r-~~~d------~a~~gl~~iaLl~l~~~~ 379 (586)
T 3h7l_A 309 LLASVELFKATKETRYLEESRLWAQRLVARQMSDEQIQHF--WSANQDGSR-PYFH------AAEAGLPTIALCEYLAIE 379 (586)
T ss_dssp HHHHHHHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSE--EBSSSSSSS-BCCC------TTTTTHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCc--CCCcccCCc-cccc------ccccHHHHHHHHHhhhhc
Confidence 34556678889999999999999999997773 3332221 111111111 1111 123333345577789999
Q ss_pred CChhhHHHHHHHHH
Q psy7224 96 GNPIYREKVEKIRS 109 (297)
Q Consensus 96 gd~~y~~~a~~~~~ 109 (297)
+++.+.+.++....
T Consensus 380 ~d~~~~~~a~~~i~ 393 (586)
T 3h7l_A 380 DDSVQTESVKCIVN 393 (586)
T ss_dssp CSTTTTHHHHHHHH
T ss_pred CChHHHHHHHHHHH
Confidence 99988777776544
No 42
>1r76_A Pectate lyase; A-helical structure; 2.65A {Azospirillum irakense} SCOP: a.102.5.1
Probab=36.32 E-value=1.1e+02 Score=29.11 Aligned_cols=53 Identities=25% Similarity=0.375 Sum_probs=38.2
Q ss_pred eeehhhhHhh----h--CChhhHHHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeee
Q psy7224 85 HLEFVYLSDV----T--GNPIYREKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISM 139 (297)
Q Consensus 85 ~LEf~~LS~l----T--gd~~y~~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~ 139 (297)
..+...|.++ | ++++|.+++.|..+.|..++..+|-||.+. +.+..+. +.++|
T Consensus 152 a~vl~aL~rv~~~~t~~~~~~y~~Ai~Rgl~wlL~mQ~~nGGWpqFd-pdn~~y~-~~IpF 210 (408)
T 1r76_A 152 VTEIRFLAQVVSQLAPEEAAPYRDAALKGIEYLLASQFPNGGWPQVW-PLEGGYH-DAITY 210 (408)
T ss_dssp HHHHHHHHHHHHHSCGGGCHHHHHHHHHHHHHHHHHSCTTSCCBSBS-SCCCGGG-GSEEC
T ss_pred HHHHHHHHHHHhhccccccHHHHHHHHHHHHHHHHccCCCCCCcCcC-ccccccc-cCCCc
Confidence 3445555553 6 899999999999999999999999999765 3334333 34555
No 43
>1wzz_A Probable endoglucanase; glycoside hydrolase family 8 (GH-8), (alpha/alpha)6 barrel, structural genomics; 1.65A {Gluconacetobacter xylinus} SCOP: a.102.1.2
Probab=35.07 E-value=45 Score=30.51 Aligned_cols=112 Identities=16% Similarity=0.110 Sum_probs=69.6
Q ss_pred ccchhhhhhhhhhhhhccCCCchHHHHHHHHHHHHhc-ccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccceee
Q psy7224 9 VFETTIRFIGAILTLYSFTGDPMYRDKAVHIADKMLP-AFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLE 87 (297)
Q Consensus 9 vFEttIR~LGGLLSAy~Ls~d~~lL~kA~~lad~Ll~-AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LE 87 (297)
--..=+++.=+||=|..+=+++.++..|+.|.+.|+. .....+|.+. +-.|... ..+.....++++-. +.==
T Consensus 104 AtDgDl~IA~ALl~A~~~Wg~~~Y~~~A~~il~~i~~~~v~~~~g~~~----llPg~~g-f~~~~~~~~npSY~--~p~~ 176 (334)
T 1wzz_A 104 ATDGDLLIALALGRAGKRFQRPDYIQDAMAIYGDVLNLMTMKAGPYVV----LMPGAVG-FTKKDSVILNLSYY--VMPS 176 (334)
T ss_dssp CHHHHHHHHHHHHHHHHHHTCHHHHHHHHHHHHHHHHHHEEEETTEEE----ECSCSSS-CBCSSEEEECGGGC--CHHH
T ss_pred CCHHHHHHHHHHHHHHHHhCCHHHHHHHHHHHHHHHHhcccCCCCeEE----ECCCccc-ccCCCCCeechhhc--CHHH
Confidence 3334477778888888888999999999999998874 2222223222 1111100 00000001111111 0112
Q ss_pred hhhhHhhhCChhhHHHHHHHHHHHHhcC-CCCCCCCccccC
Q psy7224 88 FVYLSDVTGNPIYREKVEKIRSVISSIE-KPNGLYPNYLNP 127 (297)
Q Consensus 88 f~~LS~lTgd~~y~~~a~~~~~~l~~~~-~~~gL~p~~i~~ 127 (297)
|..+.+.++++.+.+.+++.++.|.+.. ...||.|..+..
T Consensus 177 ~~~fa~~~~~~~W~~~~~~~~~ll~~~~~~~tGL~pDw~~~ 217 (334)
T 1wzz_A 177 LLQAFDLTADPRWRQVMEDGIRLVSAGRFGQWRLPPDWLAV 217 (334)
T ss_dssp HHHHHHHHCCTHHHHHHHHHHHHHHHSCBTTTTBCCSSEEE
T ss_pred HHHHHHccCCchHHHHHHHHHHHHHHcccCCCCCCccceee
Confidence 6668899999999999999999998753 568999999876
No 44
>1v5d_A Chitosanase; chitosan degradation, hydrolase, glycosil hydrolase, family 8; HET: PIN; 1.50A {Bacillus SP} SCOP: a.102.1.2 PDB: 1v5c_A*
Probab=32.63 E-value=93 Score=28.99 Aligned_cols=107 Identities=12% Similarity=0.133 Sum_probs=66.9
Q ss_pred cchhhhhhhhhhhhhccCCCc---hHHHHHHHHHHHHhc-ccCCCCCCcccceeecCCCCCCCCcCCCCcceecccccce
Q psy7224 10 FETTIRFIGAILTLYSFTGDP---MYRDKAVHIADKMLP-AFKTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLH 85 (297)
Q Consensus 10 FEttIR~LGGLLSAy~Ls~d~---~lL~kA~~lad~Ll~-AF~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~ 85 (297)
-..=+++.=+||=|..+=+++ .++..|+.|.+.|+. ......++.. +.... ... ...+.++-+ ..
T Consensus 134 tDgDl~IA~ALl~A~~~Wg~~g~~~Y~~~A~~il~~i~~~~~~~~~~~l~----~g~~~-~~~----~~~~npSY~--~p 202 (386)
T 1v5d_A 134 TDGDLDIAYSLLLAHKQWGSNGTVNYLKEAQDMITKGIKASNVTNNNQLN----LGDWD-SKS----SLDTRPSDW--MM 202 (386)
T ss_dssp HHHHHHHHHHHHHHHHHHCSSSSSCHHHHHHHHHHHTHHHHHBCTTSSBC----SSTTS-CTT----CCCBCGGGC--CH
T ss_pred CHHHHHHHHHHHHHHHHcCCCchHhHHHHHHHHHHHHHHhcccCCCCeee----ecccC-CCC----CCeechhhc--cH
Confidence 334467777888888887776 899999999988764 2332222211 11110 000 011112211 01
Q ss_pred eehhhhHhhhCChhhHHHHHHHHHHHHhcC----CCCCCCCccccC
Q psy7224 86 LEFVYLSDVTGNPIYREKVEKIRSVISSIE----KPNGLYPNYLNP 127 (297)
Q Consensus 86 LEf~~LS~lTgd~~y~~~a~~~~~~l~~~~----~~~gL~p~~i~~ 127 (297)
==|..+.++++++.+.+.+++.++.|.+.. ...||.|.++..
T Consensus 203 ~~l~~f~~~~~~~~W~~v~~~~~~~l~~~~~~~~~~tGL~PDw~~~ 248 (386)
T 1v5d_A 203 SHLRAFYEFTGDKTWLTVINNLYDVYTQFSNKYSPNTGLISDFVVK 248 (386)
T ss_dssp HHHHHHHHHHCCTHHHHHHHHHHHHHHHHHHHHCTTTCCCCSSEET
T ss_pred HHHHHHHHhcCCCcHHHHHHHHHHHHHHHHHhcCCCcCCCCcceec
Confidence 136778899999999998888888876542 578999999987
No 45
>1ks8_A Endo-B-1,4-glucanase; cellulase, endoglucanase, termite, glycosyl hydrolase, family 9, (alpha/alpha)6; 1.40A {Nasutitermes takasagoensis} SCOP: a.102.1.2 PDB: 1ksc_A 1ksd_A
Probab=31.91 E-value=28 Score=33.09 Aligned_cols=73 Identities=14% Similarity=0.263 Sum_probs=49.9
Q ss_pred ccCCCchHHHHHHHHHHHHhcccC-CCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhh-hCChhhHH
Q psy7224 25 SFTGDPMYRDKAVHIADKMLPAFK-TPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDV-TGNPIYRE 102 (297)
Q Consensus 25 ~Ls~d~~lL~kA~~lad~Ll~AF~-tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~l-Tgd~~y~~ 102 (297)
.+++++.+.+.++..++.++.... ||-|+|+. ..|. . +.-+.+..+-....+++ +++.+|.+
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~tp~Gl~~~-----------~~WG--s---~~~~~n~a~l~~~~~~~~~~~~~y~~ 329 (433)
T 1ks8_A 266 KLTNKQAYKDTVQSYVNYLINNQQKTPKGLLYI-----------DMWG--T---LRHAANAAFIMLEAAELGLSASSYRQ 329 (433)
T ss_dssp HHHCCHHHHHHHHHHHHHHHHTSCBCTTSCBCC-----------CSTT--H---HHHHHHHHHHHHHHHHTTSSHHHHHH
T ss_pred hccChHHHHHHHHHHHHHHHhcCCcCCCCceee-----------cCCc--h---hHHHHHHHHHHHHHHhcCCCHHHHHH
Confidence 455678888899999999997664 78888872 2342 1 12222223333345667 89999999
Q ss_pred HHHHHHHHHHh
Q psy7224 103 KVEKIRSVISS 113 (297)
Q Consensus 103 ~a~~~~~~l~~ 113 (297)
.|.+-++.|-.
T Consensus 330 ~A~~qldYiLG 340 (433)
T 1ks8_A 330 FAQTQIDYALG 340 (433)
T ss_dssp HHHHHHHHHHT
T ss_pred HHHHhHhhccC
Confidence 99998887765
No 46
>3nnb_A Alginate lyase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE CIT; 1.60A {Bacteroides ovatus} PDB: 3nfv_A*
Probab=31.71 E-value=17 Score=34.26 Aligned_cols=59 Identities=15% Similarity=0.170 Sum_probs=0.0
Q ss_pred CCCCCCcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHhhhCChhhHHHHHHHHHH
Q psy7224 48 KTPTGIPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSDVTGNPIYREKVEKIRSV 110 (297)
Q Consensus 48 ~tp~giP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~lTgd~~y~~~a~~~~~~ 110 (297)
++|.|+||-+- .|+.++.... .....+.....-.--..-.-.+|||++|.++|.++.+.
T Consensus 75 ~~~dg~Pyi~r---DG~~nP~~~~-~d~~~l~~~~~a~~~LALAW~~TGd~~YA~kA~~iL~a 133 (382)
T 3nnb_A 75 SKPDGLPYIRK---DGQRNPELDK-LDRNKLGDMSKAVTTLGLAYYFSGDEKYAQKAVDFLNV 133 (382)
T ss_dssp TSTTCCSCEEC---TTCCCGGGGG-SSHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH
T ss_pred CCCCCCCcccc---cCCCCCcccc-ccHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHH
No 47
>1wu4_A Xylanase Y; (alpla/alpha)6 barrel, glycoside hydrolase family 8, hydrola; 1.35A {Bacillus halodurans} SCOP: a.102.1.2 PDB: 1wu5_A* 3a3v_A 2drr_A 2drs_A 1wu6_A* 2drq_A 2dro_A
Probab=29.85 E-value=1.6e+02 Score=27.49 Aligned_cols=115 Identities=20% Similarity=0.114 Sum_probs=68.0
Q ss_pred CccchhhhhhhhhhhhhccCC-----CchHHHHHHHHHHHHhcc-cCCCCCCcccceeecCCCCCCCCcCC-CCcceecc
Q psy7224 8 SVFETTIRFIGAILTLYSFTG-----DPMYRDKAVHIADKMLPA-FKTPTGIPHALINVYTGDSKNYAWAS-GSASILSE 80 (297)
Q Consensus 8 svFEttIR~LGGLLSAy~Ls~-----d~~lL~kA~~lad~Ll~A-F~tp~giP~~~vn~~~g~~~~~~~~~-~~~~~lAe 80 (297)
|--..=+++.=+||=|..+=+ ++.++..|+.|.+.|+.- ...+ |-| .+++...... +.+ ...+.++-
T Consensus 125 ~AtDgDl~IA~ALl~A~~~Wg~~~g~~~~Y~~~A~~il~~i~~~~~~~~-~~~--~l~p~~~~~~---f~~~~~~~npSY 198 (396)
T 1wu4_A 125 PAPDGEEYFALALFFASHRWGDGDEQPFNYSEQARKLLHTCVHNGEGGP-GHP--MWNRDNKLIK---FIPEVEFSDPSY 198 (396)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCCSSTTCCHHHHHHHHHHHHHHTTSSSS-CCC--SBCTTTCCBC---SSTTCSEECGGG
T ss_pred CCCHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHHHhhccCC-Ccc--eecCCCceee---ecCCCCeeChhh
Confidence 333344677778887877766 678999999999998852 2222 211 1222221000 000 11122222
Q ss_pred cccceeehhhh-Hh---hhCChhhHHHHHHHHHHHHhcC-CCCCCCCccccCCCCcc
Q psy7224 81 LGTLHLEFVYL-SD---VTGNPIYREKVEKIRSVISSIE-KPNGLYPNYLNPKTGHW 132 (297)
Q Consensus 81 ~gs~~LEf~~L-S~---lTgd~~y~~~a~~~~~~l~~~~-~~~gL~p~~i~~~~g~~ 132 (297)
. ..-|..+ ++ .++++.+.+.+++.++.|.+.. ...||.|.++... |.+
T Consensus 199 ~---~pa~~~~fa~~~~~~~~~~W~~~~~~~~~lL~~~~~~~tGL~PDw~~~d-g~~ 251 (396)
T 1wu4_A 199 H---LPHFYELFSLWANEEDRVFWKEAAEASREYLKIACHPETGLAPEYAYYD-GTP 251 (396)
T ss_dssp C---CHHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHHSCTTTCCCCSSEETT-SSB
T ss_pred c---cHHHHHHHHHhcccccChhHHHHHHHHHHHHHhcccCCCCCCCceeeec-Ccc
Confidence 1 2233343 44 6788889999999999887753 5789999999754 444
No 48
>1gxm_A Pectate lyase; mechanism, elimination; 1.32A {Cellvibrio cellulosa} SCOP: a.102.5.1 PDB: 1gxn_A 1gxo_A*
Probab=26.10 E-value=50 Score=30.48 Aligned_cols=101 Identities=22% Similarity=0.388 Sum_probs=58.8
Q ss_pred hHHHHH-----HHHHHHHhcccCCCCC-CcccceeecCCCCCCCCcCCCCcceecccccceeehhhhHh---hhCChhhH
Q psy7224 31 MYRDKA-----VHIADKMLPAFKTPTG-IPHALINVYTGDSKNYAWASGSASILSELGTLHLEFVYLSD---VTGNPIYR 101 (297)
Q Consensus 31 ~lL~kA-----~~lad~Ll~AF~tp~g-iP~~~vn~~~g~~~~~~~~~~~~~~lAe~gs~~LEf~~LS~---lTgd~~y~ 101 (297)
-.|+|+ ...||.|+- |.+|+| =|.. ++..+-......+ . ...=+-+.-..|...|.+ .+++++|.
T Consensus 23 ~~~~~~~~~w~~~~Ad~~l~-~Q~~~GGW~kn-~d~~~~~~~~~~~---~-~~t~DnddTa~vl~~Larv~~~~~~~~y~ 96 (332)
T 1gxm_A 23 NWLNNARTKWSASRADVVLS-YQQNNGGWPKN-LDYNSVGNGGGGN---E-SGTIDNGATITEMVFLAEVYKSGGNTKYR 96 (332)
T ss_dssp HHHHHHTTSSCGGGHHHHHH-TCCTTSCCCSC-CCTTTCCCCCCCC---S-CEECGGGTTHHHHHHHHHHHHHHCCHHHH
T ss_pred hhhcchHHHHHHHHHHHHHH-cCcCCCCCCcc-eecccccccCCCC---C-CCCccCccHHHHHHHHHHHhccccchHHH
Confidence 356666 346888876 676664 4543 2322211111111 1 111122223345555544 48899999
Q ss_pred HHHHHHHHHHHhcCCCCCCCCccccCCCCccccceeee
Q psy7224 102 EKVEKIRSVISSIEKPNGLYPNYLNPKTGHWGQSHISM 139 (297)
Q Consensus 102 ~~a~~~~~~l~~~~~~~gL~p~~i~~~~g~~~~~~~~~ 139 (297)
+++.|..+.|..++..+|=||.+. +.+..+. ++++|
T Consensus 97 ~Ai~Rgl~wlL~mQ~~nGGWpqFd-pd~~~Yl-~~IpF 132 (332)
T 1gxm_A 97 DAVRKAANFLVNSQYSTGALPQFY-PLKGGYS-DHATF 132 (332)
T ss_dssp HHHHHHHHHHHHHCCTTSCCBSEE-SCCSGGG-GSEEC
T ss_pred HHHHHHHHHHHhccCCCCCccccC-CCccccc-ccCCc
Confidence 999999999999999999999764 4444443 34555
No 49
>3ren_A Glycosyl hydrolase, family 8; (alpha/alpha)6-barrel fold, alpha-amylase; 2.00A {Clostridium perfringens}
Probab=22.55 E-value=40 Score=31.31 Aligned_cols=67 Identities=6% Similarity=-0.018 Sum_probs=45.2
Q ss_pred hhhhhhhhhhhcCCCCchhhhHHHHHHHHHhhccccccccccccccCCCCCCCCCCCCCCCcchhhHHhhhhHHHHh
Q psy7224 192 VIESYFYLWRVTKDPKYREWGWDYVQMMKHAWDNYVTYAWGKNELKPLSRRGHSGSIFGSAELGMTIIDGLDTLYIM 268 (297)
Q Consensus 192 ~iES~fyl~r~T~d~~yre~~w~i~~a~~~~~~~y~gya~~~Dv~~p~s~~d~~~Sf~~~~~~~~tl~eTLkyLyLm 268 (297)
.+.+|....+.=+++.|++.|.+|.++|.+.|-.........|...+ + .--.+|++ +-.+|+.|+-.
T Consensus 119 IA~ALl~A~~~W~~~~Y~~~A~~I~~~i~~~~~~~g~l~~~~d~~~~-~-~~ln~SY~--------~~~a~~~f~~~ 185 (350)
T 3ren_A 119 IIKALLLANNRWNSFYYKFYAINIANSLLKHAEENETLVDYIDNYGK-G-NTTTLCYL--------DLPTMKLLSQV 185 (350)
T ss_dssp HHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHEETTEECSEECSSCB-C-SEEEGGGC--------CHHHHHHHHHH
T ss_pred HHHHHHHHHHHcCcHHHHHHHHHHHHHHHHHccccCcccCCCCccCC-C-CEeehHhc--------CHHHHHHHHHh
Confidence 45667777777789999999999999999988765333333344332 1 11235777 77777777754
No 50
>3h7l_A Endoglucanase; dehydrogenase, PSI-2, NYSGXRC, structural GEN protein structure initiative; 2.30A {Vibrio parahaemolyticus}
Probab=21.70 E-value=46 Score=33.06 Aligned_cols=38 Identities=21% Similarity=0.311 Sum_probs=27.5
Q ss_pred hhhhhcCCCCchhhhHHHHHHHHHhhcc--cccccccccc
Q psy7224 198 YLWRVTKDPKYREWGWDYVQMMKHAWDN--YVTYAWGKNE 235 (297)
Q Consensus 198 yl~r~T~d~~yre~~w~i~~a~~~~~~~--y~gya~~~Dv 235 (297)
=||++|||++|.+.+.+..+.+...... ..||.|..|-
T Consensus 314 eLy~ATgd~~YL~~a~~~a~~l~~~~~~~~~~g~~w~~~d 353 (586)
T 3h7l_A 314 ELFKATKETRYLEESRLWAQRLVARQMSDEQIQHFWSANQ 353 (586)
T ss_dssp HHHHHHCCHHHHHHHHHHHHHHHTTEECCSSCSSEEBSSS
T ss_pred HHHHHhCCHHHHHHHHHHHHHHHHhccCCccCCCcCCCcc
Confidence 4789999999999998877777765433 2466666443
Done!