Query psy7226
Match_columns 279
No_of_seqs 191 out of 1302
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 21:19:31 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7226.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7226hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1bg2_A Kinesin; motor protein, 100.0 2.4E-63 8.2E-68 453.8 -10.1 211 20-252 38-272 (325)
2 2vvg_A Kinesin-2; motor protei 100.0 5.8E-63 2E-67 454.8 -9.9 206 24-252 54-282 (350)
3 3lre_A Kinesin-like protein KI 100.0 1.7E-62 5.7E-67 453.1 -7.3 206 24-252 70-299 (355)
4 3bfn_A Kinesin-like protein KI 100.0 2.8E-62 9.5E-67 454.5 -6.1 206 25-252 64-294 (388)
5 1t5c_A CENP-E protein, centrom 100.0 1.3E-62 4.6E-67 452.5 -8.9 209 24-252 42-275 (349)
6 2y65_A Kinesin, kinesin heavy 100.0 1E-62 3.5E-67 455.5 -10.0 212 19-252 44-279 (365)
7 2zfi_A Kinesin-like protein KI 100.0 4.7E-63 1.6E-67 458.5 -12.3 211 25-256 47-293 (366)
8 4a14_A Kinesin, kinesin-like p 100.0 2.4E-62 8.3E-67 450.8 -7.8 210 23-252 47-290 (344)
9 3b6u_A Kinesin-like protein KI 100.0 5E-63 1.7E-67 458.0 -12.8 207 25-252 67-299 (372)
10 2h58_A Kinesin-like protein KI 100.0 4.1E-62 1.4E-66 446.5 -7.3 208 25-252 47-275 (330)
11 2owm_A Nckin3-434, related to 100.0 4.2E-62 1.4E-66 461.3 -8.7 214 24-254 94-342 (443)
12 1x88_A Kinesin-like protein KI 100.0 2E-62 6.9E-67 453.2 -10.9 210 24-252 53-297 (359)
13 1goj_A Kinesin, kinesin heavy 100.0 1.9E-62 6.6E-67 452.4 -12.7 206 25-252 46-276 (355)
14 3cob_A Kinesin heavy chain-lik 100.0 5E-62 1.7E-66 451.2 -10.1 209 25-253 46-275 (369)
15 1f9v_A Kinesin-like protein KA 100.0 3.2E-61 1.1E-65 443.3 -5.7 214 25-252 51-285 (347)
16 3gbj_A KIF13B protein; kinesin 100.0 2.3E-61 7.8E-66 445.4 -6.8 208 25-252 50-291 (354)
17 2heh_A KIF2C protein; kinesin, 100.0 1.6E-61 5.4E-66 449.3 -8.0 207 23-252 98-328 (387)
18 1v8k_A Kinesin-like protein KI 100.0 2.4E-61 8.1E-66 450.8 -7.7 207 23-252 118-348 (410)
19 2rep_A Kinesin-like protein KI 100.0 4.3E-61 1.5E-65 445.9 -8.6 210 25-252 82-323 (376)
20 3t0q_A AGR253WP; kinesin, alph 100.0 1.1E-60 3.7E-65 440.4 -6.2 217 25-253 52-289 (349)
21 3dc4_A Kinesin-like protein NO 100.0 1.6E-60 5.3E-65 437.7 -5.3 207 19-253 54-283 (344)
22 2wbe_C Bipolar kinesin KRP-130 100.0 2.5E-61 8.7E-66 447.6 -11.3 207 25-252 66-308 (373)
23 3nwn_A Kinesin-like protein KI 100.0 1.7E-61 5.8E-66 446.4 -13.2 211 25-253 71-306 (359)
24 4etp_A Kinesin-like protein KA 100.0 4.4E-60 1.5E-64 443.6 -7.2 215 25-253 107-342 (403)
25 2nr8_A Kinesin-like protein KI 100.0 7.6E-61 2.6E-65 442.0 -12.9 211 25-253 70-305 (358)
26 1ry6_A Internal kinesin; kines 100.0 8.4E-60 2.9E-64 435.3 -7.8 207 23-252 47-278 (360)
27 3u06_A Protein claret segregat 100.0 1.1E-58 3.7E-63 434.5 -7.8 204 25-253 105-330 (412)
28 4h1g_A Maltose binding protein 100.0 1.7E-57 5.7E-62 455.3 -9.5 208 25-252 429-657 (715)
29 2o0a_A S.cerevisiae chromosome 99.8 8.8E-24 3E-28 185.5 -5.3 120 25-172 56-185 (298)
30 2kin_B Kinesin; motor protein, 96.1 0.0011 3.6E-08 49.6 0.1 22 231-252 1-22 (100)
31 3ec2_A DNA replication protein 95.0 0.0015 5.3E-08 52.9 -2.5 53 27-80 6-58 (180)
32 2w58_A DNAI, primosome compone 92.7 0.0077 2.6E-07 49.5 -2.6 54 27-81 21-75 (202)
33 2qgz_A Helicase loader, putati 92.1 0.013 4.5E-07 52.2 -2.1 26 60-85 152-177 (308)
34 3kin_B Kinesin heavy chain; mo 90.6 0.05 1.7E-06 41.6 0.1 19 235-253 1-19 (117)
35 1jbk_A CLPB protein; beta barr 89.6 0.092 3.1E-06 41.5 0.9 36 47-82 30-65 (195)
36 3t15_A Ribulose bisphosphate c 89.0 0.077 2.6E-06 46.6 0.0 17 62-78 38-54 (293)
37 2p65_A Hypothetical protein PF 88.1 0.098 3.4E-06 41.4 0.1 34 47-80 30-63 (187)
38 4b4t_M 26S protease regulatory 87.5 0.042 1.4E-06 51.4 -2.8 49 29-77 179-232 (434)
39 4b4t_K 26S protease regulatory 87.3 0.053 1.8E-06 50.6 -2.2 16 62-77 208-223 (428)
40 2r62_A Cell division protease 86.6 0.063 2.1E-06 46.0 -2.0 53 27-80 7-64 (268)
41 3te6_A Regulatory protein SIR3 86.4 0.07 2.4E-06 47.8 -1.9 28 51-78 35-63 (318)
42 3bos_A Putative DNA replicatio 86.3 0.29 1E-05 40.3 2.1 23 59-81 51-73 (242)
43 1g8p_A Magnesium-chelatase 38 86.2 0.098 3.3E-06 46.4 -1.1 46 25-78 18-63 (350)
44 1l8q_A Chromosomal replication 85.2 0.19 6.6E-06 44.3 0.4 53 27-82 7-59 (324)
45 4b4t_J 26S protease regulatory 85.1 0.083 2.8E-06 48.9 -2.1 16 61-76 183-198 (405)
46 2v1u_A Cell division control p 85.1 0.05 1.7E-06 48.7 -3.6 23 58-80 42-64 (387)
47 2bjv_A PSP operon transcriptio 84.6 0.067 2.3E-06 45.8 -2.8 44 28-77 3-46 (265)
48 1ixz_A ATP-dependent metallopr 82.2 0.058 2E-06 45.9 -4.2 16 63-78 52-67 (254)
49 4b4t_H 26S protease regulatory 82.1 0.13 4.5E-06 48.4 -2.2 48 29-76 207-259 (467)
50 4b4t_L 26S protease subunit RP 81.8 0.15 5.1E-06 47.7 -1.9 17 61-77 216-232 (437)
51 2chg_A Replication factor C sm 81.6 0.24 8.2E-06 40.0 -0.5 24 57-80 35-58 (226)
52 3cf0_A Transitional endoplasmi 81.5 0.067 2.3E-06 47.1 -4.2 52 27-78 11-67 (301)
53 1xwi_A SKD1 protein; VPS4B, AA 81.3 0.088 3E-06 46.9 -3.5 52 27-78 8-63 (322)
54 1fnn_A CDC6P, cell division co 80.7 0.15 5E-06 45.7 -2.3 30 49-78 30-62 (389)
55 4b3f_X DNA-binding protein smu 80.7 0.38 1.3E-05 46.9 0.5 32 51-83 197-228 (646)
56 3b9p_A CG5977-PA, isoform A; A 80.7 0.082 2.8E-06 46.0 -3.9 19 60-78 54-72 (297)
57 3jvv_A Twitching mobility prot 80.6 0.3 1E-05 44.3 -0.2 29 50-78 113-141 (356)
58 1d2n_A N-ethylmaleimide-sensit 80.4 0.31 1.1E-05 41.8 -0.2 23 57-79 61-83 (272)
59 1p9r_A General secretion pathw 79.7 0.39 1.3E-05 44.6 0.2 31 50-80 157-187 (418)
60 3h4m_A Proteasome-activating n 79.5 0.094 3.2E-06 45.2 -3.9 53 26-78 12-69 (285)
61 2qby_A CDC6 homolog 1, cell di 79.1 0.16 5.5E-06 45.2 -2.6 20 59-78 44-63 (386)
62 1qde_A EIF4A, translation init 79.0 0.49 1.7E-05 39.0 0.6 25 50-76 43-67 (224)
63 3b6e_A Interferon-induced heli 79.0 0.3 1E-05 39.7 -0.7 30 49-80 39-68 (216)
64 3ly5_A ATP-dependent RNA helic 78.8 0.5 1.7E-05 40.4 0.6 26 49-76 82-107 (262)
65 2kjq_A DNAA-related protein; s 78.5 0.38 1.3E-05 37.7 -0.2 20 62-81 38-57 (149)
66 1sxj_D Activator 1 41 kDa subu 78.5 0.36 1.2E-05 42.6 -0.4 32 49-80 47-78 (353)
67 1tue_A Replication protein E1; 78.3 0.28 9.5E-06 41.3 -1.2 21 61-81 59-79 (212)
68 2z4s_A Chromosomal replication 78.0 0.46 1.6E-05 44.2 0.1 21 61-81 131-151 (440)
69 3h1t_A Type I site-specific re 77.9 0.61 2.1E-05 44.7 0.9 33 51-84 190-222 (590)
70 2gxq_A Heat resistant RNA depe 77.5 0.57 1.9E-05 37.9 0.5 25 50-76 30-54 (207)
71 1vec_A ATP-dependent RNA helic 77.3 0.61 2.1E-05 37.7 0.7 26 49-76 31-56 (206)
72 3eie_A Vacuolar protein sortin 77.3 0.12 4.1E-06 45.8 -3.9 18 61-78 52-69 (322)
73 2jlq_A Serine protease subunit 77.3 0.41 1.4E-05 44.5 -0.4 30 51-81 11-41 (451)
74 3bor_A Human initiation factor 76.6 0.43 1.5E-05 40.0 -0.5 25 50-76 59-83 (237)
75 3d8b_A Fidgetin-like protein 1 76.5 0.12 4.2E-06 46.6 -4.2 20 59-78 116-135 (357)
76 3dkp_A Probable ATP-dependent 76.0 0.66 2.3E-05 38.8 0.5 26 49-76 57-82 (245)
77 2x8a_A Nuclear valosin-contain 75.8 0.099 3.4E-06 45.5 -4.8 51 28-78 7-62 (274)
78 2eyu_A Twitching motility prot 75.4 0.53 1.8E-05 40.6 -0.2 17 62-78 27-43 (261)
79 3uk6_A RUVB-like 2; hexameric 75.3 0.46 1.6E-05 42.3 -0.7 30 49-78 57-88 (368)
80 2qp9_X Vacuolar protein sortin 74.5 0.19 6.6E-06 45.3 -3.4 17 62-78 86-102 (355)
81 2qby_B CDC6 homolog 3, cell di 74.1 0.23 7.8E-06 44.5 -3.0 32 49-80 33-65 (384)
82 2pl3_A Probable ATP-dependent 73.8 0.82 2.8E-05 38.0 0.5 25 50-76 54-78 (236)
83 1u0j_A DNA replication protein 73.4 0.65 2.2E-05 40.5 -0.2 29 50-78 91-122 (267)
84 3iuy_A Probable ATP-dependent 73.3 0.83 2.8E-05 37.7 0.5 25 50-76 49-73 (228)
85 1e9r_A Conjugal transfer prote 72.4 0.77 2.6E-05 42.2 0.0 27 60-86 53-79 (437)
86 3vfd_A Spastin; ATPase, microt 72.3 0.26 8.9E-06 44.8 -3.2 18 61-78 149-166 (389)
87 1qvr_A CLPB protein; coiled co 72.2 0.98 3.3E-05 45.6 0.8 38 47-84 178-215 (854)
88 1wrb_A DJVLGB; RNA helicase, D 72.1 0.95 3.2E-05 38.1 0.6 26 49-76 51-76 (253)
89 1sxj_C Activator 1 40 kDa subu 72.1 0.66 2.3E-05 41.1 -0.5 24 55-78 41-64 (340)
90 4b4t_I 26S protease regulatory 72.0 0.75 2.6E-05 42.9 -0.1 17 61-77 217-233 (437)
91 3syl_A Protein CBBX; photosynt 71.9 0.64 2.2E-05 40.3 -0.6 17 62-78 69-85 (309)
92 1rif_A DAR protein, DNA helica 71.8 1 3.5E-05 38.7 0.7 30 51-82 121-150 (282)
93 1t6n_A Probable ATP-dependent 71.4 1 3.4E-05 36.9 0.5 25 50-76 43-67 (220)
94 3co5_A Putative two-component 71.4 0.56 1.9E-05 36.2 -1.0 18 60-77 27-44 (143)
95 2qz4_A Paraplegin; AAA+, SPG7, 70.8 0.49 1.7E-05 39.9 -1.6 20 61-80 40-59 (262)
96 3fmo_B ATP-dependent RNA helic 70.7 0.98 3.4E-05 39.5 0.3 26 51-76 122-147 (300)
97 2fz4_A DNA repair protein RAD2 70.4 0.98 3.4E-05 38.1 0.3 27 51-79 101-127 (237)
98 2c9o_A RUVB-like 1; hexameric 69.9 0.65 2.2E-05 43.3 -1.1 46 28-78 34-81 (456)
99 2b8t_A Thymidine kinase; deoxy 69.5 0.91 3.1E-05 38.3 -0.1 26 61-86 13-38 (223)
100 3fe2_A Probable ATP-dependent 69.5 1.1 3.8E-05 37.5 0.4 26 49-76 57-82 (242)
101 1w5s_A Origin recognition comp 69.4 0.91 3.1E-05 40.8 -0.2 28 53-80 40-72 (412)
102 3ber_A Probable ATP-dependent 69.3 1.2 4.1E-05 37.7 0.5 25 50-76 72-96 (249)
103 3n70_A Transport activator; si 69.2 0.67 2.3E-05 35.8 -1.0 19 58-76 22-40 (145)
104 3eiq_A Eukaryotic initiation f 69.0 1.3 4.4E-05 39.7 0.7 25 50-76 69-93 (414)
105 2oxc_A Probable ATP-dependent 69.0 1.2 4.2E-05 36.9 0.6 25 50-76 53-77 (230)
106 3llm_A ATP-dependent RNA helic 68.8 1.2 3.9E-05 37.3 0.4 28 49-78 67-94 (235)
107 1njg_A DNA polymerase III subu 68.6 0.87 3E-05 37.0 -0.4 19 62-80 47-65 (250)
108 1lv7_A FTSH; alpha/beta domain 68.5 0.58 2E-05 39.6 -1.6 18 61-78 46-63 (257)
109 4fcw_A Chaperone protein CLPB; 68.2 0.87 3E-05 39.4 -0.6 17 61-77 48-64 (311)
110 3pxg_A Negative regulator of g 68.1 1.3 4.6E-05 41.3 0.7 36 48-83 189-224 (468)
111 2ewv_A Twitching motility prot 68.0 0.78 2.7E-05 41.7 -0.9 18 61-78 137-154 (372)
112 2zan_A Vacuolar protein sortin 67.9 0.23 8E-06 46.2 -4.6 18 61-78 168-185 (444)
113 1iqp_A RFCS; clamp loader, ext 67.4 0.88 3E-05 39.4 -0.7 25 57-81 43-67 (327)
114 3fmp_B ATP-dependent RNA helic 67.2 1.3 4.4E-05 41.0 0.4 26 51-76 122-147 (479)
115 1q0u_A Bstdead; DEAD protein, 67.1 0.9 3.1E-05 37.3 -0.7 25 50-76 33-57 (219)
116 1ofh_A ATP-dependent HSL prote 67.0 0.64 2.2E-05 40.1 -1.7 19 60-78 50-68 (310)
117 2chq_A Replication factor C sm 67.0 0.83 2.8E-05 39.4 -0.9 24 57-80 35-58 (319)
118 2orw_A Thymidine kinase; TMTK, 66.8 1.1 3.8E-05 36.3 -0.1 23 63-85 6-28 (184)
119 3oiy_A Reverse gyrase helicase 66.4 1.5 5.3E-05 39.6 0.7 25 49-75 27-51 (414)
120 3cf2_A TER ATPase, transitiona 66.0 1.3 4.4E-05 44.6 0.1 48 29-76 202-254 (806)
121 1iy2_A ATP-dependent metallopr 65.9 0.71 2.4E-05 39.7 -1.6 16 63-78 76-91 (278)
122 3pvs_A Replication-associated 65.8 0.78 2.7E-05 42.8 -1.4 28 50-77 40-67 (447)
123 1gvn_B Zeta; postsegregational 65.3 1.2 4.2E-05 38.7 -0.1 18 61-78 34-51 (287)
124 3pfi_A Holliday junction ATP-d 65.3 0.87 3E-05 40.1 -1.2 18 61-78 56-73 (338)
125 2oap_1 GSPE-2, type II secreti 64.7 1.2 4.2E-05 42.3 -0.3 20 57-78 259-278 (511)
126 1hqc_A RUVB; extended AAA-ATPa 64.5 1.7 5.9E-05 37.7 0.6 20 59-78 37-56 (324)
127 1g5t_A COB(I)alamin adenosyltr 64.4 1.3 4.5E-05 36.6 -0.1 28 60-87 28-55 (196)
128 1w36_D RECD, exodeoxyribonucle 64.3 1.3 4.6E-05 42.8 -0.1 25 61-85 165-189 (608)
129 2j0s_A ATP-dependent RNA helic 64.3 1.7 5.8E-05 39.0 0.6 25 51-77 67-91 (410)
130 1n0w_A DNA repair protein RAD5 64.0 1 3.6E-05 37.2 -0.8 33 48-80 9-44 (243)
131 3u61_B DNA polymerase accessor 63.5 1.8 6.1E-05 37.8 0.5 20 61-80 49-68 (324)
132 3fht_A ATP-dependent RNA helic 63.3 1.7 5.7E-05 38.8 0.3 28 49-76 53-80 (412)
133 2r44_A Uncharacterized protein 62.9 0.88 3E-05 40.0 -1.6 29 49-79 37-65 (331)
134 1xx6_A Thymidine kinase; NESG, 62.5 1.5 5.2E-05 35.9 -0.1 24 62-85 10-33 (191)
135 2w0m_A SSO2452; RECA, SSPF, un 62.5 2.2 7.5E-05 34.7 0.9 32 50-81 10-44 (235)
136 1s2m_A Putative ATP-dependent 61.9 1.9 6.5E-05 38.5 0.4 25 50-76 50-74 (400)
137 1sxj_E Activator 1 40 kDa subu 61.9 1.5 5.2E-05 38.6 -0.2 16 63-78 39-54 (354)
138 2dr3_A UPF0273 protein PH0284; 60.7 1.9 6.6E-05 35.6 0.2 32 50-81 10-44 (247)
139 3upu_A ATP-dependent DNA helic 60.6 2.5 8.6E-05 39.2 1.0 19 62-80 47-65 (459)
140 1r6b_X CLPA protein; AAA+, N-t 60.6 2.2 7.4E-05 42.2 0.6 37 48-84 195-231 (758)
141 3pey_A ATP-dependent RNA helic 60.4 2 6.9E-05 37.9 0.3 28 50-77 34-61 (395)
142 2z0m_A 337AA long hypothetical 60.3 2.2 7.6E-05 36.8 0.6 26 50-77 23-48 (337)
143 1sxj_B Activator 1 37 kDa subu 60.0 1.6 5.4E-05 37.7 -0.5 24 57-80 39-62 (323)
144 2gk6_A Regulator of nonsense t 59.6 2.2 7.4E-05 41.4 0.4 22 62-83 197-218 (624)
145 2dhr_A FTSH; AAA+ protein, hex 59.4 0.57 2E-05 44.5 -3.7 16 63-78 67-82 (499)
146 1in4_A RUVB, holliday junction 59.4 1.1 3.8E-05 39.7 -1.6 17 62-78 53-69 (334)
147 4gp7_A Metallophosphoesterase; 59.1 1 3.5E-05 35.8 -1.8 16 63-78 12-27 (171)
148 4gl2_A Interferon-induced heli 58.8 2.8 9.7E-05 40.6 1.1 28 49-78 13-40 (699)
149 4a2p_A RIG-I, retinoic acid in 58.7 2.7 9.1E-05 39.2 0.8 25 50-76 14-38 (556)
150 2r8r_A Sensor protein; KDPD, P 58.7 1.9 6.7E-05 36.5 -0.1 25 61-85 7-31 (228)
151 2i4i_A ATP-dependent RNA helic 58.3 2.5 8.5E-05 37.9 0.5 24 51-76 45-68 (417)
152 2db3_A ATP-dependent RNA helic 58.1 2.5 8.7E-05 38.7 0.6 24 51-76 86-109 (434)
153 3pxi_A Negative regulator of g 58.0 2.6 9E-05 41.7 0.7 36 48-83 189-224 (758)
154 3b85_A Phosphate starvation-in 57.4 1.7 5.9E-05 36.0 -0.6 27 50-78 14-40 (208)
155 2cvh_A DNA repair and recombin 57.2 1.6 5.6E-05 35.4 -0.8 31 50-80 7-40 (220)
156 3hu3_A Transitional endoplasmi 57.0 0.65 2.2E-05 43.9 -3.7 19 60-78 238-256 (489)
157 3a00_A Guanylate kinase, GMP k 56.7 1.6 5.3E-05 35.1 -1.0 13 65-77 6-18 (186)
158 3c8u_A Fructokinase; YP_612366 56.1 2.3 8E-05 34.6 -0.0 16 62-77 24-39 (208)
159 3tr0_A Guanylate kinase, GMP k 56.0 1.6 5.5E-05 35.1 -1.1 15 63-77 10-24 (205)
160 3lw7_A Adenylate kinase relate 55.7 1.7 5.8E-05 33.6 -1.0 14 63-76 4-17 (179)
161 2oca_A DAR protein, ATP-depend 55.6 3.1 0.00011 38.7 0.7 30 50-81 120-149 (510)
162 1um8_A ATP-dependent CLP prote 55.5 1.4 4.9E-05 39.5 -1.6 18 61-78 73-90 (376)
163 1ojl_A Transcriptional regulat 55.4 2.6 9E-05 36.8 0.2 19 58-76 23-41 (304)
164 3tbk_A RIG-I helicase domain; 55.1 3.3 0.00011 38.4 0.8 24 51-76 12-35 (555)
165 1hv8_A Putative ATP-dependent 54.4 2.9 9.8E-05 36.5 0.3 26 51-77 36-61 (367)
166 1lvg_A Guanylate kinase, GMP k 54.0 1.8 6.2E-05 35.2 -1.0 16 63-78 7-22 (198)
167 4ag6_A VIRB4 ATPase, type IV s 54.0 2.3 7.7E-05 38.5 -0.5 21 63-83 38-58 (392)
168 1wp9_A ATP-dependent RNA helic 53.6 3.9 0.00013 36.8 1.0 28 50-80 16-43 (494)
169 1xti_A Probable ATP-dependent 53.6 3.3 0.00011 36.6 0.6 25 50-76 37-61 (391)
170 4a74_A DNA repair and recombin 53.5 1.8 6.3E-05 35.3 -1.1 30 49-78 11-43 (231)
171 2v1x_A ATP-dependent DNA helic 53.5 3.5 0.00012 39.7 0.7 26 49-76 50-75 (591)
172 1rz3_A Hypothetical protein rb 53.2 2.3 7.7E-05 34.6 -0.6 29 49-77 8-39 (201)
173 1kgd_A CASK, peripheral plasma 53.1 1.9 6.5E-05 34.4 -1.0 14 63-76 8-21 (180)
174 3i5x_A ATP-dependent RNA helic 53.0 3.1 0.0001 39.3 0.2 26 51-76 102-127 (563)
175 2xzl_A ATP-dependent helicase 53.0 3.4 0.00012 41.4 0.6 22 63-84 378-399 (802)
176 2fwr_A DNA repair protein RAD2 52.4 3.5 0.00012 37.9 0.5 28 49-78 99-126 (472)
177 1jr3_A DNA polymerase III subu 52.3 2.4 8.2E-05 37.5 -0.6 18 61-78 39-56 (373)
178 1fuu_A Yeast initiation factor 52.0 2.5 8.5E-05 37.4 -0.6 25 50-76 50-74 (394)
179 2iut_A DNA translocase FTSK; n 51.5 2.9 9.8E-05 40.4 -0.3 25 61-85 215-239 (574)
180 4etp_B Spindle POLE BODY-assoc 51.2 2 7E-05 38.1 -1.2 89 22-116 88-183 (333)
181 3tau_A Guanylate kinase, GMP k 51.2 1.8 6E-05 35.5 -1.6 16 62-77 10-25 (208)
182 2wjy_A Regulator of nonsense t 51.2 3.6 0.00012 41.2 0.4 21 63-83 374-394 (800)
183 1ly1_A Polynucleotide kinase; 50.8 2.3 7.8E-05 33.2 -0.9 15 62-76 4-18 (181)
184 3hws_A ATP-dependent CLP prote 50.7 2.4 8.1E-05 37.9 -0.9 17 61-77 52-68 (363)
185 1qhx_A CPT, protein (chloramph 50.1 2.4 8.1E-05 33.3 -0.9 15 62-76 5-19 (178)
186 2p5t_B PEZT; postsegregational 49.8 1.7 5.8E-05 36.8 -2.0 16 61-76 33-48 (253)
187 1xjc_A MOBB protein homolog; s 49.5 3.6 0.00012 33.0 0.1 19 64-82 8-26 (169)
188 2z83_A Helicase/nucleoside tri 49.4 3.9 0.00013 37.9 0.3 19 63-81 24-43 (459)
189 1zp6_A Hypothetical protein AT 49.3 1.8 6.2E-05 34.4 -1.8 16 62-77 11-26 (191)
190 4a4z_A Antiviral helicase SKI2 49.2 4.6 0.00016 41.5 0.8 25 50-76 46-70 (997)
191 3lnc_A Guanylate kinase, GMP k 49.0 2.9 0.0001 34.5 -0.6 14 64-77 31-44 (231)
192 3fho_A ATP-dependent RNA helic 48.9 3.5 0.00012 38.7 -0.1 25 52-76 150-174 (508)
193 2ykg_A Probable ATP-dependent 48.8 4.4 0.00015 39.3 0.6 25 50-76 20-44 (696)
194 1znw_A Guanylate kinase, GMP k 48.3 2.5 8.7E-05 34.4 -1.1 13 65-77 25-37 (207)
195 3trf_A Shikimate kinase, SK; a 48.3 2.6 9E-05 33.3 -1.0 15 62-76 7-21 (185)
196 1ye8_A Protein THEP1, hypothet 48.0 2.6 8.8E-05 33.9 -1.0 13 65-77 5-17 (178)
197 3iij_A Coilin-interacting nucl 47.4 2.8 9.4E-05 33.1 -1.0 15 62-76 13-27 (180)
198 3lfu_A DNA helicase II; SF1 he 47.0 4.2 0.00014 39.1 0.1 19 60-78 22-40 (647)
199 2ga8_A Hypothetical 39.9 kDa p 46.9 7.5 0.00026 35.2 1.7 22 57-78 21-42 (359)
200 2gza_A Type IV secretion syste 46.7 2.8 9.7E-05 37.7 -1.1 15 64-78 179-193 (361)
201 2whx_A Serine protease/ntpase/ 46.5 4.9 0.00017 38.9 0.5 23 52-76 180-202 (618)
202 1z6g_A Guanylate kinase; struc 46.4 2.8 9.7E-05 34.6 -1.1 14 64-77 27-40 (218)
203 3b9q_A Chloroplast SRP recepto 46.3 3 0.0001 36.6 -1.0 17 62-78 102-118 (302)
204 1rj9_A FTSY, signal recognitio 46.2 3 0.0001 36.7 -1.0 17 62-78 104-120 (304)
205 3e1s_A Exodeoxyribonuclease V, 46.1 5.3 0.00018 38.4 0.6 32 49-82 195-226 (574)
206 1f2t_A RAD50 ABC-ATPase; DNA d 46.0 3.3 0.00011 32.2 -0.7 15 64-78 27-41 (149)
207 1ypw_A Transitional endoplasmi 45.8 2.8 9.7E-05 42.0 -1.3 17 62-78 240-256 (806)
208 3nbx_X ATPase RAVA; AAA+ ATPas 45.8 4.5 0.00016 38.2 0.2 27 49-77 32-58 (500)
209 1odf_A YGR205W, hypothetical 3 45.6 3.2 0.00011 36.2 -0.8 17 61-77 32-48 (290)
210 2j41_A Guanylate kinase; GMP, 45.4 2.4 8.3E-05 34.0 -1.6 14 63-76 9-22 (207)
211 2bdt_A BH3686; alpha-beta prot 45.1 2.5 8.5E-05 33.7 -1.6 16 63-78 5-20 (189)
212 2ius_A DNA translocase FTSK; n 45.0 4.2 0.00014 38.7 -0.3 22 62-83 169-190 (512)
213 2ehv_A Hypothetical protein PH 45.0 3 0.0001 34.5 -1.1 16 63-78 33-48 (251)
214 1sxj_A Activator 1 95 kDa subu 44.9 4 0.00014 38.5 -0.4 18 61-78 78-95 (516)
215 1gm5_A RECG; helicase, replica 44.8 5.9 0.0002 39.6 0.8 23 56-78 385-407 (780)
216 2xau_A PRE-mRNA-splicing facto 44.5 6.2 0.00021 39.3 0.9 13 63-75 112-124 (773)
217 2pt7_A CAG-ALFA; ATPase, prote 44.5 3.2 0.00011 36.9 -1.1 15 63-77 174-188 (330)
218 3asz_A Uridine kinase; cytidin 44.5 3.1 0.00011 33.6 -1.1 14 64-77 10-23 (211)
219 3sop_A Neuronal-specific septi 44.4 2.3 7.7E-05 36.8 -2.1 16 62-77 4-19 (270)
220 1kag_A SKI, shikimate kinase I 44.2 3.3 0.00011 32.2 -1.0 16 62-77 6-21 (173)
221 1kht_A Adenylate kinase; phosp 44.0 3.3 0.00011 32.6 -1.0 15 62-76 5-19 (192)
222 1c4o_A DNA nucleotide excision 44.0 5.3 0.00018 39.1 0.3 50 28-83 2-51 (664)
223 3sqw_A ATP-dependent RNA helic 43.9 5.2 0.00018 38.0 0.2 28 49-76 49-76 (579)
224 3kta_A Chromosome segregation 43.6 4 0.00014 32.1 -0.5 15 63-77 29-43 (182)
225 2qnr_A Septin-2, protein NEDD5 43.5 2.4 8.4E-05 37.1 -2.0 23 55-77 13-35 (301)
226 2zr9_A Protein RECA, recombina 43.4 6.1 0.00021 35.4 0.6 34 48-81 45-82 (349)
227 4a2q_A RIG-I, retinoic acid in 43.3 6.5 0.00022 39.1 0.8 25 50-76 255-279 (797)
228 2qag_C Septin-7; cell cycle, c 43.1 2.4 8.4E-05 39.1 -2.1 23 55-77 26-48 (418)
229 2i3b_A HCR-ntpase, human cance 43.0 3.7 0.00013 33.4 -0.9 16 63-78 4-19 (189)
230 3kb2_A SPBC2 prophage-derived 42.9 3.6 0.00012 31.8 -0.9 14 63-76 4-17 (173)
231 1gku_B Reverse gyrase, TOP-RG; 42.1 6.9 0.00023 40.5 0.8 24 50-75 63-86 (1054)
232 3tif_A Uncharacterized ABC tra 41.8 3.7 0.00013 34.5 -1.1 14 64-77 35-48 (235)
233 2zts_A Putative uncharacterize 41.6 5.8 0.0002 32.6 0.1 32 49-80 16-50 (251)
234 2rhm_A Putative kinase; P-loop 41.4 3.9 0.00013 32.3 -1.0 16 62-77 7-22 (193)
235 2ze6_A Isopentenyl transferase 41.1 4.9 0.00017 34.0 -0.4 13 63-75 4-16 (253)
236 3uie_A Adenylyl-sulfate kinase 41.1 3 0.0001 33.7 -1.7 17 61-77 26-42 (200)
237 2og2_A Putative signal recogni 41.0 4.1 0.00014 36.8 -1.0 17 62-78 159-175 (359)
238 3pxi_A Negative regulator of g 40.9 3.7 0.00013 40.7 -1.4 16 62-77 523-538 (758)
239 1uaa_A REP helicase, protein ( 40.7 6.2 0.00021 38.3 0.2 20 60-79 15-34 (673)
240 3aez_A Pantothenate kinase; tr 40.6 5.3 0.00018 35.2 -0.3 15 63-77 93-107 (312)
241 1htw_A HI0065; nucleotide-bind 40.5 5 0.00017 31.6 -0.4 17 62-78 35-51 (158)
242 2px0_A Flagellar biosynthesis 40.4 4.7 0.00016 35.2 -0.6 19 62-80 107-125 (296)
243 2ce7_A Cell division protein F 40.3 3.5 0.00012 38.8 -1.6 17 62-78 51-67 (476)
244 1np6_A Molybdopterin-guanine d 40.3 6.1 0.00021 31.7 0.1 20 64-83 10-29 (174)
245 1qvr_A CLPB protein; coiled co 39.8 4.4 0.00015 40.8 -1.1 17 61-77 589-605 (854)
246 3cf2_A TER ATPase, transitiona 39.5 3.5 0.00012 41.4 -1.8 16 61-76 512-527 (806)
247 3cm0_A Adenylate kinase; ATP-b 39.4 4.3 0.00015 31.9 -1.0 15 62-76 6-20 (186)
248 1tev_A UMP-CMP kinase; ploop, 39.1 4.5 0.00015 31.9 -0.9 15 62-76 5-19 (196)
249 3e70_C DPA, signal recognition 38.9 3.5 0.00012 36.7 -1.7 18 61-78 130-147 (328)
250 2qen_A Walker-type ATPase; unk 38.8 5.3 0.00018 34.6 -0.6 18 61-78 32-49 (350)
251 2zj8_A DNA helicase, putative 38.7 6.2 0.00021 38.7 -0.2 21 55-77 36-56 (720)
252 1nks_A Adenylate kinase; therm 38.1 4.6 0.00016 31.7 -1.0 14 63-76 4-17 (194)
253 1oyw_A RECQ helicase, ATP-depe 38.1 4.3 0.00015 38.4 -1.4 26 49-76 31-56 (523)
254 1y63_A LMAJ004144AAA protein; 38.0 4.7 0.00016 32.0 -1.0 15 62-76 12-26 (184)
255 2xgj_A ATP-dependent RNA helic 37.9 8.3 0.00029 39.7 0.7 26 50-77 93-118 (1010)
256 3vaa_A Shikimate kinase, SK; s 37.8 5.6 0.00019 32.0 -0.6 16 62-77 27-42 (199)
257 2qor_A Guanylate kinase; phosp 37.8 5.9 0.0002 32.0 -0.4 14 63-76 15-28 (204)
258 3t61_A Gluconokinase; PSI-biol 37.6 4.8 0.00017 32.3 -1.0 15 62-76 20-34 (202)
259 1e6c_A Shikimate kinase; phosp 37.5 4.8 0.00017 31.2 -1.0 15 63-77 5-19 (173)
260 2w00_A HSDR, R.ECOR124I; ATP-b 37.0 9.3 0.00032 39.5 0.8 18 64-81 304-321 (1038)
261 1s96_A Guanylate kinase, GMP k 36.9 4.9 0.00017 33.4 -1.1 14 63-76 19-32 (219)
262 2v6i_A RNA helicase; membrane, 36.8 6.7 0.00023 35.9 -0.2 15 63-77 5-19 (431)
263 2pcj_A ABC transporter, lipopr 36.7 4.9 0.00017 33.4 -1.1 13 65-77 35-47 (224)
264 1knq_A Gluconate kinase; ALFA/ 36.6 4.8 0.00016 31.4 -1.1 16 62-77 10-25 (175)
265 2jeo_A Uridine-cytidine kinase 36.2 5.1 0.00018 33.5 -1.1 13 65-77 30-42 (245)
266 2bbw_A Adenylate kinase 4, AK4 36.2 4.3 0.00015 33.9 -1.6 16 62-77 29-44 (246)
267 1moz_A ARL1, ADP-ribosylation 36.0 9.1 0.00031 29.5 0.5 28 49-76 6-34 (183)
268 3rc3_A ATP-dependent RNA helic 36.0 5.6 0.00019 39.1 -0.9 19 55-75 152-170 (677)
269 2vli_A Antibiotic resistance p 36.0 5.3 0.00018 31.2 -0.9 15 62-76 7-21 (183)
270 2iyv_A Shikimate kinase, SK; t 35.9 5.3 0.00018 31.4 -1.0 14 63-76 5-18 (184)
271 1via_A Shikimate kinase; struc 35.8 5.3 0.00018 31.2 -1.0 15 63-77 7-21 (175)
272 3gfo_A Cobalt import ATP-bindi 35.8 5.3 0.00018 34.6 -1.0 14 65-78 39-52 (275)
273 3qks_A DNA double-strand break 35.5 6.1 0.00021 32.3 -0.7 15 64-78 27-41 (203)
274 2bwj_A Adenylate kinase 5; pho 35.4 5.5 0.00019 31.6 -1.0 15 62-76 14-28 (199)
275 4g1u_C Hemin import ATP-bindin 35.4 5.4 0.00018 34.3 -1.1 14 65-78 42-55 (266)
276 1vma_A Cell division protein F 35.3 4.3 0.00015 35.7 -1.7 18 62-79 106-123 (306)
277 4eun_A Thermoresistant glucoki 35.3 4.4 0.00015 32.7 -1.6 16 62-77 31-46 (200)
278 3m6a_A ATP-dependent protease 35.2 4.8 0.00016 38.3 -1.6 16 62-77 110-125 (543)
279 1r6b_X CLPA protein; AAA+, N-t 35.2 6.6 0.00022 38.7 -0.6 17 62-78 490-506 (758)
280 1lkx_A Myosin IE heavy chain; 35.1 8.1 0.00028 38.1 0.0 22 57-78 91-112 (697)
281 2onk_A Molybdate/tungstate ABC 35.0 5.6 0.00019 33.6 -1.0 14 64-77 28-41 (240)
282 1w9i_A Myosin II heavy chain; 34.6 8.3 0.00028 38.5 0.0 22 57-78 169-190 (770)
283 4ddu_A Reverse gyrase; topoiso 34.4 10 0.00035 39.4 0.7 24 50-75 85-108 (1104)
284 1u94_A RECA protein, recombina 34.3 10 0.00036 34.0 0.6 35 48-82 47-85 (356)
285 2va8_A SSO2462, SKI2-type heli 34.3 9.2 0.00031 37.3 0.3 25 51-77 38-63 (715)
286 2p6r_A Afuhel308 helicase; pro 34.3 5.7 0.0002 38.8 -1.2 21 55-77 37-57 (702)
287 1zd8_A GTP:AMP phosphotransfer 34.2 5.9 0.0002 32.5 -1.0 15 62-76 9-23 (227)
288 2pt5_A Shikimate kinase, SK; a 34.2 5.8 0.0002 30.6 -1.0 14 63-76 3-16 (168)
289 1ex7_A Guanylate kinase; subst 34.2 6.8 0.00023 31.8 -0.6 13 63-75 4-16 (186)
290 2yhs_A FTSY, cell division pro 34.1 6.2 0.00021 37.4 -0.9 17 62-78 295-311 (503)
291 2r2a_A Uncharacterized protein 34.0 6 0.00021 32.4 -0.9 16 63-78 8-23 (199)
292 3a4m_A L-seryl-tRNA(SEC) kinas 34.0 6.1 0.00021 33.4 -0.9 16 62-77 6-21 (260)
293 1yks_A Genome polyprotein [con 33.9 8.3 0.00028 35.5 -0.1 21 55-77 5-25 (440)
294 1c9k_A COBU, adenosylcobinamid 33.9 7.4 0.00025 31.6 -0.4 13 63-75 2-14 (180)
295 1sgw_A Putative ABC transporte 33.8 5.9 0.0002 32.9 -1.0 13 65-77 40-52 (214)
296 3fb4_A Adenylate kinase; psych 33.8 6.1 0.00021 32.0 -1.0 14 63-76 3-16 (216)
297 1b0u_A Histidine permease; ABC 33.6 6.1 0.00021 33.8 -1.0 13 65-77 37-49 (262)
298 1ukz_A Uridylate kinase; trans 33.6 6.2 0.00021 31.6 -1.0 15 62-76 17-31 (203)
299 1g6h_A High-affinity branched- 33.5 6.1 0.00021 33.6 -1.1 14 64-77 37-50 (257)
300 1qf9_A UMP/CMP kinase, protein 33.4 6.1 0.00021 31.0 -1.0 14 63-76 9-22 (194)
301 2z43_A DNA repair and recombin 33.3 10 0.00034 33.3 0.3 33 48-80 92-127 (324)
302 1v5w_A DMC1, meiotic recombina 33.3 9.4 0.00032 33.9 0.1 32 49-80 108-142 (343)
303 1ji0_A ABC transporter; ATP bi 33.2 6.1 0.00021 33.2 -1.1 14 64-77 36-49 (240)
304 2c95_A Adenylate kinase 1; tra 33.1 6.3 0.00021 31.1 -1.0 15 62-76 11-25 (196)
305 3tqc_A Pantothenate kinase; bi 33.1 6.3 0.00022 35.0 -1.0 15 63-77 95-109 (321)
306 1aky_A Adenylate kinase; ATP:A 32.9 6.5 0.00022 32.1 -0.9 15 62-76 6-20 (220)
307 1i84_S Smooth muscle myosin he 32.9 10 0.00035 39.7 0.3 22 57-78 166-187 (1184)
308 2v26_A Myosin VI; calmodulin-b 32.8 9.2 0.00031 38.3 0.0 22 57-78 137-158 (784)
309 3dm5_A SRP54, signal recogniti 32.7 8 0.00027 36.0 -0.4 23 60-82 100-122 (443)
310 4db1_A Myosin-7; S1DC, cardiac 32.7 9.3 0.00032 38.2 0.0 22 57-78 168-189 (783)
311 1kk8_A Myosin heavy chain, str 32.7 9.1 0.00031 38.6 -0.1 22 57-78 166-187 (837)
312 2ff7_A Alpha-hemolysin translo 32.6 6.4 0.00022 33.3 -1.1 14 64-77 39-52 (247)
313 3l9o_A ATP-dependent RNA helic 32.6 9.5 0.00032 39.7 0.1 26 49-76 190-215 (1108)
314 2v3c_C SRP54, signal recogniti 32.6 10 0.00035 35.0 0.3 23 62-84 101-123 (432)
315 2fna_A Conserved hypothetical 32.6 8.5 0.00029 33.3 -0.3 20 61-80 31-50 (357)
316 1cke_A CK, MSSA, protein (cyti 32.5 8.1 0.00028 31.4 -0.4 14 63-76 8-21 (227)
317 3otd_A TRNA(His) guanylyltrans 32.4 8.3 0.00028 33.3 -0.3 53 18-70 23-76 (269)
318 2cbz_A Multidrug resistance-as 32.3 6.5 0.00022 33.0 -1.1 14 64-77 35-48 (237)
319 1mv5_A LMRA, multidrug resista 32.3 6.5 0.00022 33.1 -1.0 14 64-77 32-45 (243)
320 3kl4_A SRP54, signal recogniti 32.2 9.4 0.00032 35.4 -0.0 21 61-81 98-118 (433)
321 3auy_A DNA double-strand break 32.1 9.7 0.00033 34.1 0.0 13 64-76 29-41 (371)
322 3fvq_A Fe(3+) IONS import ATP- 32.1 6.6 0.00023 35.5 -1.1 14 65-78 35-48 (359)
323 3dl0_A Adenylate kinase; phosp 31.9 6.8 0.00023 31.7 -1.0 14 63-76 3-16 (216)
324 2i1q_A DNA repair and recombin 31.9 11 0.00036 32.9 0.2 34 48-81 83-119 (322)
325 2pze_A Cystic fibrosis transme 31.8 6.7 0.00023 32.7 -1.0 14 64-77 38-51 (229)
326 3rlf_A Maltose/maltodextrin im 31.8 6.8 0.00023 35.7 -1.0 14 65-78 34-47 (381)
327 1uf9_A TT1252 protein; P-loop, 31.8 5.9 0.0002 31.5 -1.4 16 61-76 9-24 (203)
328 4a2w_A RIG-I, retinoic acid in 31.8 12 0.0004 38.2 0.5 26 50-77 255-280 (936)
329 1g8x_A Myosin II heavy chain f 31.8 9.7 0.00033 39.2 -0.0 22 57-78 169-190 (1010)
330 3a8t_A Adenylate isopentenyltr 31.7 8.6 0.00029 34.5 -0.4 15 62-76 42-56 (339)
331 1vpl_A ABC transporter, ATP-bi 31.7 6.8 0.00023 33.4 -1.0 14 65-78 46-59 (256)
332 3sr0_A Adenylate kinase; phosp 31.5 7 0.00024 32.2 -1.0 14 63-76 3-16 (206)
333 1w7j_A Myosin VA; motor protei 31.4 10 0.00034 38.0 0.0 22 57-78 153-174 (795)
334 1sq5_A Pantothenate kinase; P- 31.4 6.9 0.00024 34.1 -1.1 16 62-77 82-97 (308)
335 1g41_A Heat shock protein HSLU 31.3 7.3 0.00025 36.3 -0.9 17 61-77 51-67 (444)
336 1z63_A Helicase of the SNF2/RA 31.3 13 0.00045 34.2 0.8 22 61-83 58-79 (500)
337 3crm_A TRNA delta(2)-isopenten 31.3 8.8 0.0003 34.1 -0.4 15 62-76 7-21 (323)
338 1pzn_A RAD51, DNA repair and r 31.2 11 0.00036 33.7 0.1 31 48-78 116-149 (349)
339 2yz2_A Putative ABC transporte 31.1 7 0.00024 33.4 -1.1 15 64-78 37-51 (266)
340 3foz_A TRNA delta(2)-isopenten 31.1 8.9 0.0003 34.0 -0.4 15 62-76 12-26 (316)
341 3umf_A Adenylate kinase; rossm 31.0 7.4 0.00025 32.4 -0.9 15 62-76 31-45 (217)
342 2ycu_A Non muscle myosin 2C, a 30.9 11 0.00037 38.9 0.1 22 57-78 143-164 (995)
343 2yyz_A Sugar ABC transporter, 30.9 7.2 0.00025 35.2 -1.1 14 65-78 34-47 (359)
344 2olj_A Amino acid ABC transpor 30.8 7.2 0.00025 33.5 -1.0 14 64-77 54-67 (263)
345 2qmh_A HPR kinase/phosphorylas 30.8 7.7 0.00026 32.2 -0.8 21 57-77 31-51 (205)
346 2d2e_A SUFC protein; ABC-ATPas 30.7 7.2 0.00025 33.0 -1.1 14 64-77 33-46 (250)
347 2yvu_A Probable adenylyl-sulfa 30.6 7.4 0.00025 30.7 -0.9 15 62-76 15-29 (186)
348 2ghi_A Transport protein; mult 30.5 7.3 0.00025 33.2 -1.1 15 63-77 49-63 (260)
349 3k1j_A LON protease, ATP-depen 30.4 9.3 0.00032 36.7 -0.4 23 54-78 56-78 (604)
350 2j9r_A Thymidine kinase; TK1, 30.4 10 0.00035 31.7 -0.1 24 62-85 30-53 (214)
351 2cdn_A Adenylate kinase; phosp 30.4 7.5 0.00026 31.1 -0.9 16 61-76 21-36 (201)
352 1z47_A CYSA, putative ABC-tran 30.4 7.4 0.00025 35.0 -1.1 14 65-78 46-59 (355)
353 2plr_A DTMP kinase, probable t 30.3 7.6 0.00026 31.0 -0.9 16 62-77 6-21 (213)
354 1pjr_A PCRA; DNA repair, DNA r 30.3 11 0.00037 37.1 0.0 19 60-78 24-42 (724)
355 2pbr_A DTMP kinase, thymidylat 30.2 7.5 0.00026 30.5 -1.0 14 63-76 3-16 (195)
356 2nq2_C Hypothetical ABC transp 30.2 7.5 0.00026 33.0 -1.0 15 64-78 35-49 (253)
357 2if2_A Dephospho-COA kinase; a 30.2 7.6 0.00026 31.1 -1.0 14 63-76 4-17 (204)
358 2jaq_A Deoxyguanosine kinase; 30.1 7.6 0.00026 30.8 -1.0 14 63-76 3-16 (205)
359 2v9p_A Replication protein E1; 29.9 7.5 0.00026 34.2 -1.1 16 62-77 128-143 (305)
360 3ney_A 55 kDa erythrocyte memb 29.9 6.1 0.00021 32.5 -1.6 14 63-76 22-35 (197)
361 1zak_A Adenylate kinase; ATP:A 29.9 7.7 0.00026 31.6 -1.0 15 62-76 7-21 (222)
362 2it1_A 362AA long hypothetical 29.9 7.7 0.00026 35.0 -1.0 14 65-78 34-47 (362)
363 1ak2_A Adenylate kinase isoenz 29.9 7.8 0.00027 32.0 -0.9 16 62-77 18-33 (233)
364 2eyq_A TRCF, transcription-rep 29.8 14 0.00048 38.6 0.7 28 49-76 613-640 (1151)
365 3qf7_A RAD50; ABC-ATPase, ATPa 29.8 11 0.00038 33.8 -0.0 13 65-77 28-40 (365)
366 3tqf_A HPR(Ser) kinase; transf 29.7 5.3 0.00018 32.6 -1.9 26 56-81 12-37 (181)
367 2d7d_A Uvrabc system protein B 29.5 13 0.00044 36.3 0.4 51 27-82 4-54 (661)
368 2qi9_C Vitamin B12 import ATP- 29.4 7.8 0.00027 32.9 -1.0 15 64-78 30-44 (249)
369 2ihy_A ABC transporter, ATP-bi 29.4 7.9 0.00027 33.5 -1.0 15 64-78 51-65 (279)
370 3crv_A XPD/RAD3 related DNA he 29.4 14 0.00048 35.0 0.6 30 51-84 15-44 (551)
371 1g29_1 MALK, maltose transport 29.3 8 0.00027 35.0 -1.1 15 64-78 33-47 (372)
372 1qhl_A Protein (cell division 29.3 5.7 0.00019 33.4 -1.9 14 64-77 31-44 (227)
373 2zu0_C Probable ATP-dependent 29.1 8 0.00027 33.1 -1.0 14 64-77 50-63 (267)
374 3exa_A TRNA delta(2)-isopenten 29.1 10 0.00034 33.8 -0.4 15 63-77 6-20 (322)
375 2pjz_A Hypothetical protein ST 29.1 8 0.00027 33.1 -1.0 16 63-78 33-48 (263)
376 2dfs_A Myosin-5A; myosin-V, in 28.9 12 0.0004 38.9 0.0 22 57-78 153-174 (1080)
377 1jjv_A Dephospho-COA kinase; P 28.9 10 0.00034 30.4 -0.4 15 63-77 5-19 (206)
378 1xp8_A RECA protein, recombina 28.8 14 0.00049 33.2 0.6 37 48-84 58-98 (366)
379 1v43_A Sugar-binding transport 28.8 8.3 0.00028 35.0 -1.0 14 65-78 42-55 (372)
380 2f1r_A Molybdopterin-guanine d 28.6 6.3 0.00022 31.4 -1.7 14 65-78 7-20 (171)
381 1tq4_A IIGP1, interferon-induc 28.6 6.5 0.00022 36.2 -1.8 14 64-77 73-86 (413)
382 1zuh_A Shikimate kinase; alpha 28.5 8.4 0.00029 29.8 -1.0 14 63-76 10-23 (168)
383 2ixe_A Antigen peptide transpo 28.4 8.3 0.00029 33.1 -1.1 14 64-77 49-62 (271)
384 2qag_A Septin-2, protein NEDD5 28.4 7.1 0.00024 35.0 -1.6 24 54-77 31-54 (361)
385 1e4v_A Adenylate kinase; trans 28.3 8.5 0.00029 31.2 -1.0 14 63-76 3-16 (214)
386 2z0h_A DTMP kinase, thymidylat 28.3 8.6 0.00029 30.3 -1.0 15 63-77 3-17 (197)
387 3gd7_A Fusion complex of cysti 28.2 8.5 0.00029 35.1 -1.1 14 65-78 52-65 (390)
388 1cr0_A DNA primase/helicase; R 27.6 13 0.00044 31.8 0.0 28 51-78 24-53 (296)
389 4anj_A Unconventional myosin-V 27.5 13 0.00044 38.5 0.0 22 57-78 141-162 (1052)
390 1nlf_A Regulatory protein REPA 27.5 6.9 0.00024 33.3 -1.8 18 62-79 32-49 (279)
391 1ypw_A Transitional endoplasmi 27.4 8.7 0.0003 38.5 -1.3 17 61-77 512-528 (806)
392 1zu4_A FTSY; GTPase, signal re 27.4 7.1 0.00024 34.5 -1.8 19 62-80 107-125 (320)
393 3hr8_A Protein RECA; alpha and 27.4 16 0.00054 32.9 0.6 35 47-81 44-82 (356)
394 3ice_A Transcription terminati 27.1 24 0.00082 32.5 1.7 38 47-85 160-198 (422)
395 2wv9_A Flavivirin protease NS2 27.1 15 0.0005 36.0 0.3 18 57-76 240-257 (673)
396 3be4_A Adenylate kinase; malar 27.1 9.3 0.00032 31.1 -1.0 15 62-76 7-21 (217)
397 1a5t_A Delta prime, HOLB; zinc 27.0 17 0.00058 31.9 0.7 28 51-78 14-42 (334)
398 3tlx_A Adenylate kinase 2; str 27.0 9.5 0.00032 31.9 -0.9 15 62-76 31-45 (243)
399 1ltq_A Polynucleotide kinase; 26.9 9.6 0.00033 32.6 -0.9 15 62-76 4-18 (301)
400 1svm_A Large T antigen; AAA+ f 26.8 11 0.00037 34.2 -0.7 17 62-78 171-187 (377)
401 2qt1_A Nicotinamide riboside k 26.6 12 0.0004 30.1 -0.4 25 50-76 13-37 (207)
402 2vl7_A XPD; helicase, unknown 26.6 17 0.00057 34.4 0.6 28 51-82 19-46 (540)
403 3t5d_A Septin-7; GTP-binding p 26.5 10 0.00034 32.3 -0.9 20 57-76 5-24 (274)
404 2wwf_A Thymidilate kinase, put 26.2 9.8 0.00033 30.4 -1.0 15 62-76 12-26 (212)
405 1w36_B RECB, exodeoxyribonucle 26.2 14 0.0005 38.5 0.1 18 68-85 24-41 (1180)
406 2b6h_A ADP-ribosylation factor 26.1 11 0.00039 29.7 -0.6 27 50-76 19-45 (192)
407 1e69_A Chromosome segregation 26.0 15 0.00052 32.0 0.2 16 64-79 28-43 (322)
408 3f9v_A Minichromosome maintena 25.9 14 0.00049 35.5 -0.0 15 62-76 329-343 (595)
409 4a15_A XPD helicase, ATP-depen 25.8 17 0.00059 35.1 0.5 22 53-76 17-38 (620)
410 2bbs_A Cystic fibrosis transme 25.7 9.9 0.00034 33.1 -1.1 14 64-77 68-81 (290)
411 2xb4_A Adenylate kinase; ATP-b 25.7 10 0.00035 31.1 -1.0 14 63-76 3-16 (223)
412 2gno_A DNA polymerase III, gam 25.7 14 0.00049 32.2 -0.1 32 49-80 7-38 (305)
413 3d31_A Sulfate/molybdate ABC t 25.3 7 0.00024 35.1 -2.2 15 64-78 30-44 (348)
414 2vp4_A Deoxynucleoside kinase; 25.3 10 0.00035 31.3 -1.1 15 63-77 23-37 (230)
415 3tui_C Methionine import ATP-b 24.9 11 0.00037 34.2 -1.0 14 65-78 59-72 (366)
416 2vhj_A Ntpase P4, P4; non- hyd 24.8 11 0.00038 33.6 -0.9 21 62-82 125-145 (331)
417 2pez_A Bifunctional 3'-phospho 24.7 11 0.00037 29.5 -0.9 14 63-76 8-21 (179)
418 3d3q_A TRNA delta(2)-isopenten 24.7 14 0.00047 33.1 -0.4 15 62-76 9-23 (340)
419 3o8b_A HCV NS3 protease/helica 24.7 12 0.00042 36.6 -0.7 15 63-77 235-249 (666)
420 2v54_A DTMP kinase, thymidylat 24.7 11 0.00038 29.9 -0.9 14 63-76 7-20 (204)
421 1nij_A Hypothetical protein YJ 24.5 11 0.00039 32.9 -1.0 13 65-77 9-21 (318)
422 3dmq_A RNA polymerase-associat 24.3 19 0.00065 36.7 0.6 30 52-81 162-191 (968)
423 4epz_A Transcription anti-term 24.3 42 0.0015 26.4 2.4 53 51-111 62-122 (162)
424 1nn5_A Similar to deoxythymidy 24.2 11 0.00038 30.1 -1.0 16 62-77 11-26 (215)
425 3r20_A Cytidylate kinase; stru 24.2 21 0.00072 30.0 0.7 16 62-77 11-26 (233)
426 1vht_A Dephospho-COA kinase; s 24.1 11 0.00039 30.4 -1.0 15 62-76 6-20 (218)
427 2ce2_X GTPase HRAS; signaling 24.0 14 0.00048 27.5 -0.4 14 63-76 6-19 (166)
428 3qkt_A DNA double-strand break 23.7 17 0.00058 32.0 0.0 16 65-80 28-43 (339)
429 3io5_A Recombination and repai 23.6 21 0.00073 31.8 0.7 35 49-83 11-51 (333)
430 1tf7_A KAIC; homohexamer, hexa 23.6 11 0.00038 35.5 -1.3 29 50-78 26-57 (525)
431 3u4q_A ATP-dependent helicase/ 23.5 19 0.00065 37.8 0.4 28 60-90 23-50 (1232)
432 2ged_A SR-beta, signal recogni 23.4 15 0.00051 28.7 -0.4 16 61-76 49-64 (193)
433 2dyk_A GTP-binding protein; GT 23.2 15 0.00051 27.4 -0.4 14 63-76 4-17 (161)
434 1gtv_A TMK, thymidylate kinase 23.2 7.5 0.00026 31.2 -2.3 14 63-76 3-16 (214)
435 1m7g_A Adenylylsulfate kinase; 23.2 12 0.00039 30.4 -1.1 16 62-77 27-42 (211)
436 2orv_A Thymidine kinase; TP4A 23.2 16 0.00056 30.9 -0.1 24 62-85 21-44 (234)
437 2obl_A ESCN; ATPase, hydrolase 22.9 12 0.00043 33.3 -1.0 30 49-78 59-89 (347)
438 3nh6_A ATP-binding cassette SU 22.8 8.2 0.00028 34.0 -2.2 14 64-77 84-97 (306)
439 3euj_A Chromosome partition pr 22.5 13 0.00045 35.0 -1.0 14 64-77 33-46 (483)
440 1w4r_A Thymidine kinase; type 22.4 16 0.00054 30.1 -0.4 15 62-76 22-36 (195)
441 2o5v_A DNA replication and rep 22.2 19 0.00064 32.4 -0.0 19 62-80 28-46 (359)
442 1zj6_A ADP-ribosylation factor 22.2 22 0.00075 27.6 0.4 22 55-76 11-32 (187)
443 3th5_A RAS-related C3 botulinu 27.7 19 0.00064 28.5 0.0 23 56-78 26-48 (204)
444 1oxx_K GLCV, glucose, ABC tran 22.1 7.2 0.00025 35.1 -2.8 14 65-78 36-49 (353)
445 2f9l_A RAB11B, member RAS onco 22.1 10 0.00035 30.0 -1.6 15 62-76 7-21 (199)
446 1z2a_A RAS-related protein RAB 21.7 17 0.00057 27.3 -0.4 15 62-76 7-21 (168)
447 4e22_A Cytidylate kinase; P-lo 21.3 21 0.00072 29.9 0.2 16 62-77 29-44 (252)
448 2grj_A Dephospho-COA kinase; T 21.0 14 0.00049 29.8 -1.0 15 62-76 14-28 (192)
449 1pui_A ENGB, probable GTP-bind 20.9 11 0.00039 29.9 -1.6 15 63-77 29-43 (210)
450 3lda_A DNA repair protein RAD5 20.9 23 0.00078 32.3 0.3 31 48-78 163-196 (400)
451 1z3i_X Similar to RAD54-like; 20.9 26 0.0009 33.8 0.8 26 58-84 78-103 (644)
452 3zvl_A Bifunctional polynucleo 20.7 15 0.00052 33.5 -1.0 19 58-76 256-274 (416)
453 1ky3_A GTP-binding protein YPT 20.2 19 0.00064 27.4 -0.4 15 62-76 10-24 (182)
454 2xxa_A Signal recognition part 20.1 20 0.00069 33.0 -0.3 23 62-84 102-124 (433)
455 1u8z_A RAS-related protein RAL 20.0 19 0.00065 26.9 -0.4 14 63-76 7-20 (168)
456 3eph_A TRNA isopentenyltransfe 20.0 19 0.00066 33.0 -0.4 15 63-77 5-19 (409)
457 2wsm_A Hydrogenase expression/ 20.0 23 0.00079 28.3 0.1 19 62-80 32-50 (221)
458 2fu5_C RAS-related protein RAB 20.0 21 0.00073 27.4 -0.1 17 62-78 10-26 (183)
No 1
>1bg2_A Kinesin; motor protein, ATPase, microtubule associated; HET: ADP; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 2p4n_K* 1mkj_A* 2kin_A* 3kin_A*
Probab=100.00 E-value=2.4e-63 Score=453.76 Aligned_cols=211 Identities=28% Similarity=0.387 Sum_probs=197.9
Q ss_pred EEEeeceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh---------HHHHHHHHHHHH
Q psy7226 20 WLFFDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS---------AMIMKTLQHVMQ 90 (279)
Q Consensus 20 ~~~~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~---------Gii~r~l~~lf~ 90 (279)
++..+.+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. |||||++++||.
T Consensus 38 ~~~~~~~~f~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF~ 117 (325)
T 1bg2_A 38 TVVIASKPYAFDRVFQSSTSQEQVYNDCAKKIVKDVLEGYNGTIFAYGQTSSGKTHTMEGKLHDPEGMGIIPRIVQDIFN 117 (325)
T ss_dssp EEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHHH
T ss_pred eEEECCEEEECCeEeCCCCCHHHHHHHHhhhhHHHHhCCCeEEEEEECCCCCCCceEecccCCCcccCccHHHHHHHHHH
Confidence 34557889999999999999999999999999999999999999999999999999997 799999999998
Q ss_pred HcCc------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccc
Q psy7226 91 RCNK------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDS 164 (279)
Q Consensus 91 ~~~~------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s 164 (279)
.+.. +.|++||+|||||+++|||++. ...+.+++++.+++++.|++++.|.+
T Consensus 118 ~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~----------------------~~~l~i~e~~~~~~~v~gl~~~~v~s 175 (325)
T 1bg2_A 118 YIYSMDENLEFHIKVSYFEIYLDKIRDLLDVS----------------------KTNLSVHEDKNRVPYVKGCTERFVCS 175 (325)
T ss_dssp HHHHHCSSEEEEEEEEEEEEETTEEEESSCTT----------------------CCSBCEEECTTSCEEETTCCCEEECS
T ss_pred HHHhccCCceEEEEEEEEEEecCeeeecccCC----------------------CCCceEEECCCCCEEecCceEEeCCC
Confidence 7743 8899999999999999999843 15678889999999999999999999
Q ss_pred cccceeEEEecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccc
Q psy7226 165 LNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKIN 235 (279)
Q Consensus 165 ~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN 235 (279)
++|++++|..|.++|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|+..||
T Consensus 176 ~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN 255 (325)
T 1bg2_A 176 PDEVMDTIDEGKSNRHVAVTNMNEHSSRSHSIFLINVKQENTQTEQKLSGKLYLVDLAGSEKVSKTGAEGAVLDEAKNIN 255 (325)
T ss_dssp HHHHHHHHHHHHHHTTTTCSCHHHHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSCCCCCCSSSCTTSCCCCCCC
T ss_pred HHHHHHHHHHHHhhCceeecCCCCCCCCCeEEEEEEEEEEecCCCcEEEEEEEEEECCCCCcccccCCccccchHHHHHH
Confidence 99999999999999999999999999999999999996 358999999999999999999999999999999
Q ss_pred cccchhhhhHHHhcCch
Q psy7226 236 LSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 236 ~SL~aL~~vi~aL~~~~ 252 (279)
+||++|++||.||++++
T Consensus 256 ~SL~aLg~vI~aL~~~~ 272 (325)
T 1bg2_A 256 KSLSALGNVISALAEGS 272 (325)
T ss_dssp HHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHcCC
Confidence 99999999999999863
No 2
>2vvg_A Kinesin-2; motor protein, nucleotide-binding, microtubule, ATP-binding; HET: ADP; 1.60A {Giardia intestinalis}
Probab=100.00 E-value=5.8e-63 Score=454.83 Aligned_cols=206 Identities=33% Similarity=0.450 Sum_probs=168.4
Q ss_pred eceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc---
Q psy7226 24 DHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK--- 94 (279)
Q Consensus 24 ~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~--- 94 (279)
..+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. |||||++++||..+..
T Consensus 54 ~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~ 133 (350)
T 2vvg_A 54 VPRTFTFDAVYDQTSCNYGIFQASFKPLIDAVLEGFNSTIFAYGQTGAGKTWTMGGNKEEPGAIPNSFKHLFDAINSSSS 133 (350)
T ss_dssp --EEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTCCT
T ss_pred CceEeeCCEEECCCcchhHHHHHHHHHHHHHHhCCCceeEEeecCCCCCCCEEeecCCccCchHHHHHHHHHHHHHhhcc
Confidence 3678999999999999999999999999999999999999999999999999997 8999999999998863
Q ss_pred ---cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccceeE
Q psy7226 95 ---DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQL 171 (279)
Q Consensus 95 ---~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~l 171 (279)
+.|++||+|||||+++|||++. ..+.+++++.+++++.|++++.|.+++|++++
T Consensus 134 ~~~~~v~vS~~EIYnE~i~DLL~~~-----------------------~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~l 190 (350)
T 2vvg_A 134 NQNFLVIGSYLELYNEEIRDLIKNN-----------------------TKLPLKEDKTRGIYVDGLSMHRVTTAAELSAL 190 (350)
T ss_dssp TEEEEEEEEEEEEETTEEEETTTTE-----------------------EEECEEEETTTEEEETTCCCEEESSHHHHHHH
T ss_pred CCcEEEEEEEEEEeCCEEEEcccCC-----------------------cCceeeEcCCCCEEecCCEEEEcCCHHHHHHH
Confidence 8899999999999999999843 34667888899999999999999999999999
Q ss_pred EEecccceeeEEEeecccccCceeeeeeehh-----------hhhhhhhccccCccceecccchhhhhhhhcccccccch
Q psy7226 172 IVTGNENKVTAVTKMNAQSSRSHTICTIYLG-----------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHY 240 (279)
Q Consensus 172 l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~-----------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~a 240 (279)
|..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||++
T Consensus 191 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~a 270 (350)
T 2vvg_A 191 MDKGFANRHVAATQMNDTSSRSHSIFMVRIECSEVIENKEVIRVGKLNLVDLAGSERQSKTGATGETLVEGAKINLSLSA 270 (350)
T ss_dssp HHHHHHHC----------CTTCEEEEEEEEEEEEC----CEEEEEEEEEEECCCCCC---------------CTTHHHHH
T ss_pred HHHHHhccccccccCCCCCCcceEEEEEEEEEeeccCCCccEEEEEEEEEeCCCCCccccccccHHHHHHHHHHhHHHHH
Confidence 9999999999999999999999999999986 35899999999999999999999999999999999999
Q ss_pred hhhhHHHhcCch
Q psy7226 241 LEQEEEEEKGKE 252 (279)
Q Consensus 241 L~~vi~aL~~~~ 252 (279)
|++||.||++++
T Consensus 271 Lg~vI~aL~~~~ 282 (350)
T 2vvg_A 271 LGLVISKLVEGA 282 (350)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHcCC
Confidence 999999998764
No 3
>3lre_A Kinesin-like protein KIF18A; motor protein, nucleotide binding, microtubule binding, ATP- cell projection, cytoskeleton, glycoprotein, microtubule; HET: ADP; 2.20A {Homo sapiens} SCOP: c.37.1.0
Probab=100.00 E-value=1.7e-62 Score=453.11 Aligned_cols=206 Identities=32% Similarity=0.474 Sum_probs=171.0
Q ss_pred eceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc---
Q psy7226 24 DHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK--- 94 (279)
Q Consensus 24 ~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~--- 94 (279)
.++.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||+ ||+||++++||..+..
T Consensus 70 ~~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lf~~i~~~~~ 149 (355)
T 3lre_A 70 KDLKFVFDAVFDETSTQSEVFEHTTKPILRSFLNGYNCTVLAYGATGAGKTHTMLGSADEPGVMYLTMLHLYKCMDEIKE 149 (355)
T ss_dssp CCEEEECSEEECTTCCHHHHHHTTHHHHHHHHTTTCCEEEEEECCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTT
T ss_pred CCceEEeceEECCCCChHHHHHHHHHHHHHHHhCCCceEEEEeCCCCCCceeeeccCCCCCCeeehhhhHHHHhhhhhcc
Confidence 3568999999999999999999999999999999999999999999999999997 8999999999987654
Q ss_pred ---cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccceeE
Q psy7226 95 ---DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQL 171 (279)
Q Consensus 95 ---~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~l 171 (279)
+.|.+||+|||||+++|||.+. .++.+++++.+++++.|++++.|.+++|++++
T Consensus 150 ~~~~~v~vS~~EIYnE~i~DLL~~~-----------------------~~l~ire~~~~~~~v~gl~~~~v~s~~e~~~l 206 (355)
T 3lre_A 150 EKICSTAVSYLEVYNEQIRDLLVNS-----------------------GPLAVREDTQKGVVVHGLTLHQPKSSEEILHL 206 (355)
T ss_dssp TEEEEEEEEEEEEETTEEEESSSCC-----------------------CCBEEEECTTSCEEEETCCCBCCCSHHHHHHH
T ss_pred CceEEEEEEEEEEECCEEEECcCCC-----------------------CCceeEEcCCCCEEeeeeeEEecCCHHHHHHH
Confidence 7899999999999999999843 46788899999999999999999999999999
Q ss_pred EEecccceeeEEEeecccccCceeeeeeehh------------hhhhhhhccccCccceecccchhhhhhhhcccccccc
Q psy7226 172 IVTGNENKVTAVTKMNAQSSRSHTICTIYLG------------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLH 239 (279)
Q Consensus 172 l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~------------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~ 239 (279)
|..|.++|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|+.+||+||+
T Consensus 207 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~ 286 (355)
T 3lre_A 207 LDNGNKNRTQHPTDMNATSSRSHAVFQIYLRQQDKTASINQNVRIAKMSLIDLAGSERASTSGAKGTRFVEGTNINRSLL 286 (355)
T ss_dssp HHHHHHTSCBC-----CBCTTCEEEEEEEEEEEETTSCTTCCCCCEEEEEEECCCCCC-----------------CHHHH
T ss_pred HHHHHhcCCcccccCcCCCCCCcEEEEEEEEEecCCCCCCCCEEEEEEEEEECCCCCcCcCCCCccHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999996 3589999999999999999999999999999999999
Q ss_pred hhhhhHHHhcCch
Q psy7226 240 YLEQEEEEEKGKE 252 (279)
Q Consensus 240 aL~~vi~aL~~~~ 252 (279)
+||+||.||++++
T Consensus 287 aLg~vI~aL~~~~ 299 (355)
T 3lre_A 287 ALGNVINALADSK 299 (355)
T ss_dssp HHHHHHHHHC---
T ss_pred HHHHHHHHHHhcc
Confidence 9999999999764
No 4
>3bfn_A Kinesin-like protein KIF22; limited proteolysis, structural genomics consortium domain, ADP, SGC, ATP-binding, DNA-binding, microtubule, MO protein; HET: ADP; 2.30A {Homo sapiens}
Probab=100.00 E-value=2.8e-62 Score=454.53 Aligned_cols=206 Identities=29% Similarity=0.425 Sum_probs=169.6
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc----
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK---- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~---- 94 (279)
.+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 64 ~~~f~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~Giipra~~~lF~~i~~~~~~ 143 (388)
T 3bfn_A 64 TLKYQFDAFYGERSTQQDIYAGSVQPILRHLLEGQNASVLAYGPTGAGKTHTMLGSPEQPGVIPRALMDLLQLTREEGAE 143 (388)
T ss_dssp EEEEECSEEECTTCCHHHHHHHHTGGGHHHHTTTCCEEEEEESCTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHHTST
T ss_pred eeEEEcceEecCCCCHhHHHHHHHHHHHHHhhcCceeeEeeecCCCCCCCeEeecCccccchhHHHHHHHHHHHHHhhcc
Confidence 468999999999999999999999999999999999999999999999999997 8999999999987642
Q ss_pred -----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccce
Q psy7226 95 -----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAV 169 (279)
Q Consensus 95 -----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~ 169 (279)
+.|++||+|||||+|+|||++.. ..+.+++++.+++++.|++++.|.+++|++
T Consensus 144 ~~~~~~~V~vS~lEIYnE~i~DLL~~~~----------------------~~l~ired~~~~v~v~gl~~~~V~s~~e~~ 201 (388)
T 3bfn_A 144 GRPWALSVTMSYLEIYQEKVLDLLDPAS----------------------GDLVIREDCRGNILIPGLSQKPISSFADFE 201 (388)
T ss_dssp TCSEEEEEEEEEEEEETTEEEESSSCSS----------------------CBCCCEECTTSCEECTTCCCEECCSHHHHH
T ss_pred CCCceEEEEEEEEEEECCeeeehhccCC----------------------CCceEEEcCCCCEEeccceEEEeCCHHHHH
Confidence 78999999999999999998531 467889999999999999999999999999
Q ss_pred eEEEecccceeeEEEeecccccCceeeeeeehh----------hhhhhhhccccCccceecccchhhhhhhhcccccccc
Q psy7226 170 QLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG----------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLH 239 (279)
Q Consensus 170 ~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~----------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~ 239 (279)
++|..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||+
T Consensus 202 ~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rlkE~~~INkSL~ 281 (388)
T 3bfn_A 202 RHFLPASRNRTVGATRLNQRSSRSHAVLLVKVDQRERLAPFRQREGKLYLIDLAGSEDNRRTGNKGLRLKESGAINTSLF 281 (388)
T ss_dssp HHHHHHTC-----------CGGGSEEEEEEEEEEEESSTTCCEEEEEEEEEECCCTTC--------------CCCCHHHH
T ss_pred HHHHHHhhccccccccCCCCCCCCeEEEEEEEEEeccCCCCceeEEEEEEEECCCCcccccccCccchhHHHhHhhhhHH
Confidence 999999999999999999999999999999996 3589999999999999999999999999999999999
Q ss_pred hhhhhHHHhcCch
Q psy7226 240 YLEQEEEEEKGKE 252 (279)
Q Consensus 240 aL~~vi~aL~~~~ 252 (279)
+||+||.||++++
T Consensus 282 aLg~vI~aL~~~~ 294 (388)
T 3bfn_A 282 VLGKVVDALNQGL 294 (388)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998764
No 5
>1t5c_A CENP-E protein, centromeric protein E; kinesin motor-domain-ADP complex, stranded beta-sheet core with solvent exposed alpha-helices; HET: ADP PIN; 2.50A {Homo sapiens}
Probab=100.00 E-value=1.3e-62 Score=452.53 Aligned_cols=209 Identities=32% Similarity=0.471 Sum_probs=189.3
Q ss_pred eceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc---
Q psy7226 24 DHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK--- 94 (279)
Q Consensus 24 ~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~--- 94 (279)
..+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 42 ~~~~F~FD~Vf~~~~tQ~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~ 121 (349)
T 1t5c_A 42 GSKSFNFDRVFHGNETTKNVYEEIAAPIIDSAIQGYNGTIFAYGQTASGKTYTMMGSEDHLGVIPRAIHDIFQKIKKFPD 121 (349)
T ss_dssp SSCEEECSCEECTTSCHHHHHHHTTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSSBCHHHHHHHHHHHHGGGCTT
T ss_pred CCeEEECCEEECCCCCHHHHHHHHHHHHHHHHHcCCccceeeecCCCCCCCeEEecCCCCCchHHHHHHHHHHHHHhCcC
Confidence 3578999999999999999999999999999999999999999999999999998 7999999999998864
Q ss_pred --cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccceeEE
Q psy7226 95 --DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 --~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|++||+|||||+|+|||++.. ...++.+++++.+++++.|++++.|.+++|++.+|
T Consensus 122 ~~~~v~vS~~EIYnE~i~DLL~~~~--------------------~~~~l~i~ed~~~~~~v~gl~~~~v~s~~e~~~ll 181 (349)
T 1t5c_A 122 REFLLRVSYMEIYNETITDLLCGTQ--------------------KMKPLIIREDVNRNVYVADLTEEVVYTSEMALKWI 181 (349)
T ss_dssp EEEEEEEEEEEEETTEEEESSSSSC--------------------TTCCEEEEETTTTEEEETTCCCEECSSHHHHHHHH
T ss_pred CcEEEEEEEEEEeCCEEEEccCCCC--------------------CCCCceEEECCCCCEEecCCEEEEeCCHHHHHHHH
Confidence 78999999999999999998531 12567889999999999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh--------------hhhhhhhccccCccceecccchhhhhhhhccccccc
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG--------------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSL 238 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~--------------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL 238 (279)
..|.++|.+++|.+|..|||||+||+|.+. ..|+|+|||||||||..++++.|.|++|+..||+||
T Consensus 182 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 261 (349)
T 1t5c_A 182 TKGEKSRHYGETKMNQRSSRSHTIFRMILESREKGEPSNCEGSVKVSHLNLVDLAGSERAAQTGAAGVRLKEGCNINRSL 261 (349)
T ss_dssp HHHHHTTSSSSSSSSCTTTTCEEEEEEEEEEEECC-------CEEEEEEEEEECCCGGGTC-------CCCSSSCCCHHH
T ss_pred HHhhcccccccccCCCCCCCceEEEEEEEEEeccCCCcCcCccEEEEEEEEEECCCCccccccCCccccchhhhHHhHHH
Confidence 999999999999999999999999999986 247899999999999999999999999999999999
Q ss_pred chhhhhHHHhcCch
Q psy7226 239 HYLEQEEEEEKGKE 252 (279)
Q Consensus 239 ~aL~~vi~aL~~~~ 252 (279)
++|++||.||++++
T Consensus 262 ~aLg~vI~aL~~~~ 275 (349)
T 1t5c_A 262 FILGQVIKKLSDGQ 275 (349)
T ss_dssp HHHHHHHHHHHHTC
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998765
No 6
>2y65_A Kinesin, kinesin heavy chain; motor protein; HET: ADP; 2.20A {Drosophila melanogaster} PDB: 2y5w_A*
Probab=100.00 E-value=1e-62 Score=455.52 Aligned_cols=212 Identities=29% Similarity=0.414 Sum_probs=182.8
Q ss_pred EEEEeeceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh---------HHHHHHHHHHH
Q psy7226 19 IWLFFDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS---------AMIMKTLQHVM 89 (279)
Q Consensus 19 ~~~~~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~---------Gii~r~l~~lf 89 (279)
.++..+++.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. |||||++++||
T Consensus 44 ~~i~~~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~Giipr~~~~lF 123 (365)
T 2y65_A 44 NCISIAGKVYLFDKVFKPNASQEKVYNEAAKSIVTDVLAGYNGTIFAYGQTSSGKTHTMEGVIGDSVKQGIIPRIVNDIF 123 (365)
T ss_dssp CEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBSTTCTTTBCHHHHHHHHHH
T ss_pred cEEEECCEEEeCceEecCCCCHHHHHHHhhhhHHHHHhCCCceEEEeecCCCCCCceEEecCCCCcccCChHHHHHHHHH
Confidence 345667899999999999999999999999999999999999999999999999999996 89999999999
Q ss_pred HHcCc------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcc
Q psy7226 90 QRCNK------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLD 163 (279)
Q Consensus 90 ~~~~~------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~ 163 (279)
..+.. +.|++||+|||||+++|||++. ...+.+++++.+++++.|++++.|.
T Consensus 124 ~~i~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~----------------------~~~l~i~e~~~~~~~v~gl~~~~V~ 181 (365)
T 2y65_A 124 NHIYAMEVNLEFHIKVSYYEIYMDKIRDLLDVS----------------------KVNLSVHEDKNRVPYVKGATERFVS 181 (365)
T ss_dssp HHHHHCCSCEEEEEEEEEEEEETTEEEETTCTT----------------------CCSBCEEECSSSCEEETTCCCEEEC
T ss_pred HHHHhccCCceEEEEEEEEEEECCeeeecccCC----------------------cCCceEEECCCCCEEecCCEEEecC
Confidence 98743 8899999999999999999843 1567888999999999999999999
Q ss_pred ccccceeEEEecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhccc
Q psy7226 164 SLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKI 234 (279)
Q Consensus 164 s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~I 234 (279)
|++|++.+|..|..+|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|+..|
T Consensus 182 s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~I 261 (365)
T 2y65_A 182 SPEDVFEVIEEGKSNRHIAVTNMNEHSSRSHSVFLINVKQENLENQKKLSGKLYLVDLAGSEKVSKTGAEGTVLDEAKNI 261 (365)
T ss_dssp SHHHHHHHHHHHHHHHTTTCSCHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC----------------C
T ss_pred CHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCCCEeEEEEEEEECCCCCcchhcCCcchhHHHHHHH
Confidence 999999999999999999999999999999999999996 46899999999999999999999999999999
Q ss_pred ccccchhhhhHHHhcCch
Q psy7226 235 NLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 235 N~SL~aL~~vi~aL~~~~ 252 (279)
|+||++|++||.||++++
T Consensus 262 NkSL~aLg~vI~aL~~~~ 279 (365)
T 2y65_A 262 NKSLSALGNVISALADGN 279 (365)
T ss_dssp CHHHHHHHHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHHhcCC
Confidence 999999999999998753
No 7
>2zfi_A Kinesin-like protein KIF1A, kinesin heavy chain isoform 5C; alpha and beta protein, enzyme, ATPase, P-loop, motor protein, ATP-binding, coiled coil; HET: ADP; 1.55A {Mus musculus} SCOP: c.37.1.9 PDB: 1vfw_A* 1vfx_A* 1vfz_A* 1vfv_A* 2zfj_A* 2zfk_A* 2zfl_A* 2zfm_A* 1i5s_A* 1i6i_A* 2hxf_C* 1ia0_K* 2hxh_C*
Probab=100.00 E-value=4.7e-63 Score=458.49 Aligned_cols=211 Identities=30% Similarity=0.434 Sum_probs=188.6
Q ss_pred ceeEeeecccCCC--------CCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh--------HHHHHHHHHH
Q psy7226 25 HQVFIFDNIFGPN--------DSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS--------AMIMKTLQHV 88 (279)
Q Consensus 25 ~~~f~FD~Vf~~~--------a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~--------Gii~r~l~~l 88 (279)
.+.|.||+||+++ ++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++|
T Consensus 47 ~~~f~FD~vf~~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~G~N~tifAYGqTGSGKTyTm~G~~~~~~~Giipr~~~~l 126 (366)
T 2zfi_A 47 PKSFSFDYSYWSHTSPEDINYASQKQVYRDIGEEMLQHAFEGYNVCIFAYGQTGAGKSYTMMGKQEKDQQGIIPQLCEDL 126 (366)
T ss_dssp CEEEECSEEEECSSCTTSSSCCCHHHHHHHTHHHHHHHHHTTCCEEEEEECSTTSSHHHHHTBCSGGGCBCHHHHHHHHH
T ss_pred ceEEecceEeecCccccccccCcHHHHHHHHHHHHHHHHhcCCeeEEEEeCCCCCCCceEeeCCCccCCCccHHHHHHHH
Confidence 5689999999987 89999999999999999999999999999999999999996 8999999999
Q ss_pred HHHcCc-------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q psy7226 89 MQRCNK-------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKK 161 (279)
Q Consensus 89 f~~~~~-------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 161 (279)
|..+.. +.|++||+|||||+|+|||++. ....+.+++++.+++++.||+++.
T Consensus 127 F~~i~~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~---------------------~~~~l~ire~~~~g~~v~gl~~~~ 185 (366)
T 2zfi_A 127 FSRINDTTNDNMSYSVEVSYMEIYCERVRDLLNPK---------------------NKGNLRVREHPLLGPYVEDLSKLA 185 (366)
T ss_dssp HHHHHTCCCTTEEEEEEEEEEEEETTEEEETTCTT---------------------TCSCBCEEEETTTEEEETTCCCEE
T ss_pred HHHHhhcccCCeeEEEEEEEEEeeCCeEEEccccc---------------------cCCCceEEEcCCCCEEEeCCEEEE
Confidence 998743 7899999999999999999843 225678899999999999999999
Q ss_pred ccccccceeEEEecccceeeEEEeecccccCceeeeeeehh-------------hhhhhhhccccCccceecccchhhhh
Q psy7226 162 LDSLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG-------------AMAKLHLVDLAGSEQLFSLSDNYLLR 228 (279)
Q Consensus 162 v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~-------------~~s~l~~VDLAGsEr~~~~~~~g~r~ 228 (279)
|.+++|++++|..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|+
T Consensus 186 V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl 265 (366)
T 2zfi_A 186 VTSYNDIQDLMDSGNKPRTVAATNMNETSSRSHAVFNIIFTQKRHDAETNITTEKVSKISLVDLAGSERADSTGAKGTRL 265 (366)
T ss_dssp CCSHHHHHHHHHHHHHHHTSGGGGTTTHHHHSEEEEEEEEEEEEECTTTTCEEEEEEEEEEEECCCGGGC------CCCH
T ss_pred ECCHHHHHHHHHHHhhccccccccCCCCCCcceEEEEEEEEEecccCCCCccceeEeEEEEEeCCCCccccccCCCccch
Confidence 99999999999999999999999999999999999999986 25899999999999999999999999
Q ss_pred hhhcccccccchhhhhHHHhcCchhHHH
Q psy7226 229 NEARKINLSLHYLEQEEEEEKGKEEEEE 256 (279)
Q Consensus 229 ~E~~~IN~SL~aL~~vi~aL~~~~~~~~ 256 (279)
+|+..||+||++|++||.||++++..+.
T Consensus 266 ~E~~~INkSL~aLg~vI~aL~~~~~~~~ 293 (366)
T 2zfi_A 266 KEGANINKSLTTLGKVISALAEMDSGPN 293 (366)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHC----
T ss_pred hhhhhHhHHHHHHHHHHHHHHhcccccc
Confidence 9999999999999999999998765443
No 8
>4a14_A Kinesin, kinesin-like protein KIF7; motor protein, motor domain; HET: ADP; 1.60A {Homo sapiens} SCOP: c.37.1.0 PDB: 2xt3_A*
Probab=100.00 E-value=2.4e-62 Score=450.75 Aligned_cols=210 Identities=29% Similarity=0.429 Sum_probs=176.3
Q ss_pred eeceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------------HHHHHHHHHHHH
Q psy7226 23 FDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------------AMIMKTLQHVMQ 90 (279)
Q Consensus 23 ~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------------Gii~r~l~~lf~ 90 (279)
..++.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. |||||++++||.
T Consensus 47 ~~~~~f~FD~Vf~~~~~Q~~vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~Giipr~~~~lF~ 126 (344)
T 4a14_A 47 GRDRHFGFHVVLAEDAGQEAVYQACVQPLLEAFFEGFNATVFAYGQTGSGKTYTMGEASVASLLEDEQGIVPRAMAEAFK 126 (344)
T ss_dssp TTTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHTTCCEEEEEESSTTSSHHHHHCC--------CCCCHHHHHHHHHHH
T ss_pred cccceEEEEEEEecCcchhHHHHHHHHHHHHHHHhhcCeeEEEecccCCCceEeecccchhhhhhcccCCchHHHHHHHH
Confidence 45789999999999999999999999999999999999999999999999999994 899999999999
Q ss_pred HcCc-----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcccc
Q psy7226 91 RCNK-----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSL 165 (279)
Q Consensus 91 ~~~~-----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~ 165 (279)
.+.. +.|++||+|||||+++|||++.. ....+.+++++.+++++.|++++.|.++
T Consensus 127 ~i~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------------------~~~~l~i~e~~~~~~~v~gl~~~~v~s~ 186 (344)
T 4a14_A 127 LIDENDLLDCLVHVSYLEVYKEEFRDLLEVGT--------------------ASRDIQLREDERGNVVLCGVKEVDVEGL 186 (344)
T ss_dssp HHHHCTTSEEEEEEEEEEEETTEEEETTSSCC--------------------CGGGCEEEECTTSCEEEESCCCEECCSH
T ss_pred hcccccceeeEEEEehhhhhHHHHHHHHHhcc--------------------ccccceeeeccCCCEEEEeeeeccccCH
Confidence 8764 78999999999999999998431 1246788899999999999999999999
Q ss_pred ccceeEEEecccceeeEEEeecccccCceeeeeeehhh-----------------hhhhhhccccCccceecccchhhhh
Q psy7226 166 NSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLGA-----------------MAKLHLVDLAGSEQLFSLSDNYLLR 228 (279)
Q Consensus 166 ~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~~-----------------~s~l~~VDLAGsEr~~~~~~~g~r~ 228 (279)
+|++++|..|.++|.+++|.+|..|||||+||+|+|.. .|+|+|||||||||..++++.|.|+
T Consensus 187 ~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~~~~~~skl~lVDLAGSEr~~~t~~~g~rl 266 (344)
T 4a14_A 187 DEVLSLLEMGNAARHTGATHLNHLSSRSHTVFTVTLEQRGRAPSRLPRPAPGQLLVSKFHFVDLAGSERVLKTGSTGERL 266 (344)
T ss_dssp HHHHHHHHHHHHHHHC------CCGGGSEEEEEEEEEEEC------------CEEEEEEEEEECCCCCCC----------
T ss_pred HHHHHHHHhcchhcccCcchhhhcccccceEEEEEeeeCCCCcccCCCccccceeeeeeeEEecccchhhcccCCchhhh
Confidence 99999999999999999999999999999999999962 3899999999999999999999999
Q ss_pred hhhcccccccchhhhhHHHhcCch
Q psy7226 229 NEARKINLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 229 ~E~~~IN~SL~aL~~vi~aL~~~~ 252 (279)
+|+..||+||++|++||.||++++
T Consensus 267 ~E~~~IN~SL~aLg~vI~aL~~~~ 290 (344)
T 4a14_A 267 KESIQINSSLLALGNVISALGDPQ 290 (344)
T ss_dssp ----CCCSHHHHHHHHHHHHTCTT
T ss_pred hhheeechhHHhhhhHHHhcCCcc
Confidence 999999999999999999999754
No 9
>3b6u_A Kinesin-like protein KIF3B; structural genomics consortium, motor domain, ADP, SGC, ATP-binding, coiled coil, microtubule, motor protein; HET: ADP; 1.80A {Homo sapiens} PDB: 3b6v_A*
Probab=100.00 E-value=5e-63 Score=457.99 Aligned_cols=207 Identities=33% Similarity=0.479 Sum_probs=184.8
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh---------HHHHHHHHHHHHHcCc-
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS---------AMIMKTLQHVMQRCNK- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~---------Gii~r~l~~lf~~~~~- 94 (279)
.+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. |||||++++||..+..
T Consensus 67 ~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~Giipr~~~~lF~~i~~~ 146 (372)
T 3b6u_A 67 PKTFTFDAVYDWNAKQFELYDETFRPLVDSVLQGFNGTIFAYGQTGTGKTYTMEGIRGDPEKRGVIPNSFDHIFTHISRS 146 (372)
T ss_dssp CEEEECSEEECTTCCHHHHHHHTHHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCTTSGGGBCHHHHHHHHHHHHHHTC
T ss_pred ceEEEcCeEeCCcCchHHHHHHHHHHHHHHHhCCCeeeEEeecCCCCCCCEeEecCCCCcccCCcHHHHHHHHHHHhhhc
Confidence 468999999999999999999999999999999999999999999999999996 8999999999998754
Q ss_pred ----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcccccccee
Q psy7226 95 ----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQ 170 (279)
Q Consensus 95 ----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~ 170 (279)
+.|++||+|||||+|+|||++. ....+.+++++.+++++.|++++.|.+++|+++
T Consensus 147 ~~~~~~v~vS~~EIYnE~i~DLL~~~---------------------~~~~l~i~e~~~~~v~v~gl~~~~v~s~~e~~~ 205 (372)
T 3b6u_A 147 QNQQYLVRASYLEIYQEEIRDLLSKD---------------------QTKRLELKERPDTGVYVKDLSSFVTKSVKEIEH 205 (372)
T ss_dssp SSCEEEEEEEEEEEETTEEEETTSSC---------------------TTCCBCEEEETTTEEEETTCCCEECCSHHHHHH
T ss_pred cCCceEEEEEEEEEeCCEEEECCCCC---------------------CCCCceEEECCCCcEecCCCEEEEecCHHHHHH
Confidence 8899999999999999999843 235678889999999999999999999999999
Q ss_pred EEEecccceeeEEEeecccccCceeeeeeehh------------hhhhhhhccccCccceecccchhhhhhhhccccccc
Q psy7226 171 LIVTGNENKVTAVTKMNAQSSRSHTICTIYLG------------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSL 238 (279)
Q Consensus 171 ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~------------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL 238 (279)
+|..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||
T Consensus 206 ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL 285 (372)
T 3b6u_A 206 VMNVGNQNRSVGATNMNEHSSRSHAIFVITIECSEVGLDGENHIRVGKLNLVDLAGSERQAKTGAQGERLKEATKINLSL 285 (372)
T ss_dssp HHHHHHHHHTTTCSSHHHHHHTSEEEEEEEEEEEC-----CCCEEEEEEEEEECCCCCE----------EEEGGGCCHHH
T ss_pred HHHHHHHhcCcccccCCCCCCcceEEEEEEEEEeecCCCCCcceEEEEEEEEECCCCccccccCcchhhhhhHhhhhhhH
Confidence 99999999999999999999999999999986 358999999999999999999999999999999999
Q ss_pred chhhhhHHHhcCch
Q psy7226 239 HYLEQEEEEEKGKE 252 (279)
Q Consensus 239 ~aL~~vi~aL~~~~ 252 (279)
++|++||.||++++
T Consensus 286 ~aLg~vI~aL~~~~ 299 (372)
T 3b6u_A 286 SALGNVISALVDGK 299 (372)
T ss_dssp HHHHHHHHHHHCC-
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999999864
No 10
>2h58_A Kinesin-like protein KIFC3 variant; motor domain, ADP, structural genomics, structur Al genomics consortium, SGC; HET: ADP; 1.85A {Homo sapiens}
Probab=100.00 E-value=4.1e-62 Score=446.51 Aligned_cols=208 Identities=29% Similarity=0.399 Sum_probs=185.7
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc----
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK---- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~---- 94 (279)
.+.|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 47 ~~~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~~i~~~~~~ 125 (330)
T 2h58_A 47 PVSFELDKVFSPQASQQDVFQEV-QALVTSCIDGFNVCIFAYGQTGAGKTYTMEGTAENPGINQRALQLLFSEVQEKASD 125 (330)
T ss_dssp EEEEECSEEECTTCCHHHHHTTT-HHHHHHHHTTCCEEEEEESSTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHTSCTT
T ss_pred eeEEecCeEeCCCCCcHhHHHHH-HHHHHHHhCCCEEEEEeECCCCCCCcEEEecCCCCCcHHHHHHHHHHHhhhcccCC
Confidence 46899999999999999999985 899999999999999999999999999998 7999999999998753
Q ss_pred --cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccceeEE
Q psy7226 95 --DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 --~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|++||+|||||+++|||++.. .....+...+++.+++++.|++++.|.+++|++++|
T Consensus 126 ~~~~v~vS~~EIYnE~i~DLL~~~~-------------------~~~l~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~ll 186 (330)
T 2h58_A 126 WEYTITVSAAEIYNEVLRDLLGKEP-------------------QEKLEIRLCPDGSGQLYVPGLTEFQVQSVDDINKVF 186 (330)
T ss_dssp EEEEEEEEEEEEETTEEEETTSCSS-------------------CCCCCCEECTTSSCCEECTTCCCEEECSHHHHHHHH
T ss_pred ceEEEEEEEEEEECCChhhcccccc-------------------cccceEEEeecCCCCEecCCCEEEEeCCHHHHHHHH
Confidence 78999999999999999998541 111234455788899999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhhh
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLEQ 243 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~~ 243 (279)
..|.++|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|+..||+||++|++
T Consensus 187 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~r~~E~~~IN~SL~aLg~ 266 (330)
T 2h58_A 187 EFGHTNRTTEFTNLNEHSSRSHALLIVTVRGVDCSTGLRTTGKLNLVDLAGSERVGKSGAEGSRLREAQHINKSLSALGD 266 (330)
T ss_dssp HHHHHHTTCTTCCSCSCGGGSEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCCCC------HHHHHHHHHHHHHHHHHH
T ss_pred HHHHhhCCcccccCCCCcCCccEEEEEEEEEEecCCCcEEEEEEEEEeCCCCCcccccCCchhhhHHHHHhhHhHHHHHH
Confidence 999999999999999999999999999996 46899999999999999999999999999999999999999
Q ss_pred hHHHhcCch
Q psy7226 244 EEEEEKGKE 252 (279)
Q Consensus 244 vi~aL~~~~ 252 (279)
||.||++++
T Consensus 267 vI~aL~~~~ 275 (330)
T 2h58_A 267 VIAALRSRQ 275 (330)
T ss_dssp HHHHHHTTC
T ss_pred HHHHHhcCC
Confidence 999998764
No 11
>2owm_A Nckin3-434, related to kinesin-like protein KIF1C; motor domain, ADP, NECK linker, motor PR; HET: ADP; 3.25A {Neurospora crassa}
Probab=100.00 E-value=4.2e-62 Score=461.35 Aligned_cols=214 Identities=31% Similarity=0.453 Sum_probs=180.2
Q ss_pred eceeEeeecccCC-------CCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHH
Q psy7226 24 DHQVFIFDNIFGP-------NDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQ 90 (279)
Q Consensus 24 ~~~~f~FD~Vf~~-------~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~ 90 (279)
..+.|.||+||++ .++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||.
T Consensus 94 ~~~~F~FD~vF~~~~~~~~~~asQ~~Vy~~~~~plv~~~l~GyN~tIfAYGQTGSGKTyTM~G~~~~~GIipr~~~~lF~ 173 (443)
T 2owm_A 94 EEKSFTFDKSFWSHNTEDEHYATQEHVYDSLGEEFLDHNFEGYHTCIFAYGQTGSGKSYTMMGTPDQPGLIPRTCEDLFQ 173 (443)
T ss_dssp CCEEEECSEEEEESCTTSTTCCCHHHHHHHHHHHHHHHHHTTCCEEEEEESSTTSSHHHHHTCCTTSCCHHHHHHHHHHH
T ss_pred CCceEecCeEeCCCCcCCccCCCHHHHHHhhhhhHHHHhhcCCceEEEEeCCCCCCCCEEeecCCCCCchHHHHHHHHHH
Confidence 4678999999976 489999999999999999999999999999999999999997 899999999998
Q ss_pred HcCc---------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhh
Q psy7226 91 RCNK---------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKK 161 (279)
Q Consensus 91 ~~~~---------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~ 161 (279)
.+.. +.|++||+|||||+|+|||++... ......+.+++++.+++++.||+++.
T Consensus 174 ~i~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~~~-----------------~~~~~~l~ire~~~~g~~V~gl~e~~ 236 (443)
T 2owm_A 174 RIASAQDETPNISYNVKVSYFEVYNEHVRDLLAPVVP-----------------NKPPYYLKVRESPTEGPYVKDLTEVP 236 (443)
T ss_dssp HHHHTTTTSTTCEEEEEEEEEEEETTEEEETTSCCCS-----------------SCCCCCCEEEEETTTEEEEETCCCEE
T ss_pred HHHhhhcccCCceEEEEEEEEEEECCEeeEccCcccc-----------------CCcccccceeECCCCCEeccCCEEEE
Confidence 7642 789999999999999999985321 12235688899999999999999999
Q ss_pred ccccccceeEEEecccceeeEEEeecccccCceeeeeeehh-------------hhhhhhhccccCccceecccchhhhh
Q psy7226 162 LDSLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG-------------AMAKLHLVDLAGSEQLFSLSDNYLLR 228 (279)
Q Consensus 162 v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~-------------~~s~l~~VDLAGsEr~~~~~~~g~r~ 228 (279)
|.+++|++++|..|..+|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|+
T Consensus 237 V~s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~~~~~skL~lVDLAGSER~~~t~~~g~rl 316 (443)
T 2owm_A 237 VRGLEEIIRWMRIGDGSRTVASTKMNDTSSRSHAVFTIMLKQIHHDLETDDTTERSSRIRLVDLAGSERAKSTEATGQRL 316 (443)
T ss_dssp CCSHHHHHHHHHHHHTTSCBCSSSSSCBCTTEEEEEEEEEEEEC-------CCEEEEEEEEEECCCCCC-----------
T ss_pred cCCHHHHHHHHHHHHhhCCcccCcCCCccCCCeEEEEEEEEEeecccCCCCcceEEEEEEEEECCCCccccccCCccccc
Confidence 99999999999999999999999999999999999999985 35899999999999999999999999
Q ss_pred hhhcccccccchhhhhHHHhcCchhH
Q psy7226 229 NEARKINLSLHYLEQEEEEEKGKEEE 254 (279)
Q Consensus 229 ~E~~~IN~SL~aL~~vi~aL~~~~~~ 254 (279)
+|+.+||+||++||+||.||++++..
T Consensus 317 kE~~~INkSL~aLg~vI~aL~~~~~~ 342 (443)
T 2owm_A 317 REGSNINKSLTTLGRVIAALADPKSS 342 (443)
T ss_dssp ---CCSSHHHHHHHHHHHHHCC----
T ss_pred cchhhhcHHHHHHHHHHHHHhccccc
Confidence 99999999999999999999987654
No 12
>1x88_A Kinesin-like protein KIF11; switch II, motor domain, NECK linker, cell cycle; HET: ADP NAT; 1.80A {Homo sapiens} SCOP: c.37.1.9 PDB: 3hqd_A* 3ken_A* 2pg2_A* 1yrs_A* 2fme_A* 2g1q_A* 2gm1_A* 1ii6_A* 2uyi_A* 2uym_A* 2wog_A* 2x2r_A* 2x7c_A* 2x7d_A* 2x7e_A* 2xae_A* 3k3b_A* 3k5e_A* 3l9h_A* 1q0b_A* ...
Probab=100.00 E-value=2e-62 Score=453.16 Aligned_cols=210 Identities=30% Similarity=0.469 Sum_probs=178.9
Q ss_pred eceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh-----------------HHHHHHHH
Q psy7226 24 DHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS-----------------AMIMKTLQ 86 (279)
Q Consensus 24 ~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~-----------------Gii~r~l~ 86 (279)
..+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||+++
T Consensus 53 ~~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~~~~~~~Giipr~~~ 132 (359)
T 1x88_A 53 SRKTYTFDMVFGASTKQIDVYRSVVCPILDEVIMGYNCTIFAYGQTGTGKTFTMEGERSPNEEYTWEEDPLAGIIPRTLH 132 (359)
T ss_dssp EEEEEECSEEECTTCCHHHHHHHHHHHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCCCGGGCSCGGGCTTBCHHHHHHH
T ss_pred CceEEeceEEEeccCchhHHHHHHHHHhHHHHhCCCceEEEEeCCCCCCCceEEeccCCccccccccccccCCchHHHHH
Confidence 3678999999999999999999999999999999999999999999999999995 79999999
Q ss_pred HHHHHcCc----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCC--CCCcccccchhh
Q psy7226 87 HVMQRCNK----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASP--GNGRSAASLTVK 160 (279)
Q Consensus 87 ~lf~~~~~----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~v~~l~~~ 160 (279)
+||..+.. +.|++||+|||||+|+|||++.. .....+.+++++ .+++++.||+++
T Consensus 133 ~lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~~-------------------~~~~~l~i~~~~~~~~~v~v~gl~~~ 193 (359)
T 1x88_A 133 QIFEKLTDNGTEFSVKVSLLEIYNEELFDLLNPSS-------------------DVSERLQMFDDPRNKRGVIIKGLEEI 193 (359)
T ss_dssp HHHHHTSSSSEEEEEEEEEEEEETTEEEETTCTTS-------------------CTTCCBEEEEETTEEEEEEEETCCCE
T ss_pred HHHHHHhccCceEEEEEEEEEEeCceeeehhcccc-------------------cccccceEEeccCCCCCEEEcCCEEE
Confidence 99999875 88999999999999999998542 112345666665 468999999999
Q ss_pred hccccccceeEEEecccceeeEEEeecccccCceeeeeeehh------------hhhhhhhccccCccceecccchhhhh
Q psy7226 161 KLDSLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG------------AMAKLHLVDLAGSEQLFSLSDNYLLR 228 (279)
Q Consensus 161 ~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~------------~~s~l~~VDLAGsEr~~~~~~~g~r~ 228 (279)
.|.+++|++++|..|..+|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|+
T Consensus 194 ~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl 273 (359)
T 1x88_A 194 TVHNKDEVYQILEKGAAKRTTAATLMNAYSSRSHSVFSVTIHMKETTIDGEELVKIGKLNLVDLAGSENIGRSGAVDKRA 273 (359)
T ss_dssp EECSGGGHHHHHHHHHHHHHHHHHHSTTHHHHCEEEEEEEEEEEEECTTSCEEEEEEEEEEEECCCCCC-----------
T ss_pred EcCCHHHHHHHHHHHHhhcccccccCCCCCCCccEEEEEEEEEecccCCCCceEEEEEEEEEcCCCCCcccccCCcccch
Confidence 999999999999999999999999999999999999999985 35899999999999999999999999
Q ss_pred hhhcccccccchhhhhHHHhcCch
Q psy7226 229 NEARKINLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 229 ~E~~~IN~SL~aL~~vi~aL~~~~ 252 (279)
+|+..||+||++|++||.||+++.
T Consensus 274 ~E~~~INkSL~aLg~vI~aL~~~~ 297 (359)
T 1x88_A 274 REAGNINQSLLTLGRVITALVERT 297 (359)
T ss_dssp ----CCCHHHHHHHHHHHHHHTTC
T ss_pred HHHhhhhHHHHHHHHHHHHHhcCC
Confidence 999999999999999999999764
No 13
>1goj_A Kinesin, kinesin heavy chain; motor protein, ATPase; HET: ADP; 2.3A {Neurospora crassa} SCOP: c.37.1.9
Probab=100.00 E-value=1.9e-62 Score=452.43 Aligned_cols=206 Identities=31% Similarity=0.440 Sum_probs=194.1
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh----------HHHHHHHHHHHHHcCc
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS----------AMIMKTLQHVMQRCNK 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~----------Gii~r~l~~lf~~~~~ 94 (279)
.+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 46 ~~~f~FD~Vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~Giipr~~~~lF~~i~~ 125 (355)
T 1goj_A 46 QGSFTFDRVFDMSCKQSDIFDFSIKPTVDDILNGYNGTVFAYGQTGAGKSYTMMGTSIDDPDGRGVIPRIVEQIFTSILS 125 (355)
T ss_dssp CEEEECSEEECTTCCHHHHHHHHTHHHHHHHTTTCCEEEEEECSTTSSHHHHHTBSCTTSTTTBCHHHHHHHHHHHHHHT
T ss_pred ccEEeeCeEECCCCccHHHHHHHHHHHHHHHhCCCcceEEEECCCCCCcceEeecCCCCCcccCCchHHHHHHHHHHHHh
Confidence 468999999999999999999999999999999999999999999999999996 7999999999997643
Q ss_pred ------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccc
Q psy7226 95 ------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSA 168 (279)
Q Consensus 95 ------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~ 168 (279)
+.|++||+|||||+++|||++.. ..+.+++++.+++++.|++++.|.+++|+
T Consensus 126 ~~~~~~~~v~vS~~EIYnE~i~DLL~~~~----------------------~~l~i~e~~~~g~~v~gl~~~~v~s~~e~ 183 (355)
T 1goj_A 126 SAANIEYTVRVSYMEIYMERIRDLLAPQN----------------------DNLPVHEEKNRGVYVKGLLEIYVSSVQEV 183 (355)
T ss_dssp SCTTEEEEEEEEEEEEETTEEEETTSTTC----------------------CSCCEEEETTTEEEETTCCCEECCSHHHH
T ss_pred cccCceEEEEEEEEEEECCEEEEcccCcc----------------------CCceeEEcCCCCEeecCCEEEeCCCHHHH
Confidence 78999999999999999998532 45778899999999999999999999999
Q ss_pred eeEEEecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccc
Q psy7226 169 VQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLH 239 (279)
Q Consensus 169 ~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~ 239 (279)
+++|..|..+|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||+
T Consensus 184 ~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~ 263 (355)
T 1goj_A 184 YEVMRRGGNARAVAATNMNQESSRSHSIFVITITQKNVETGSAKSGQLFLVDLAGSEKVGKTGASGQTLEEAKKINKSLS 263 (355)
T ss_dssp HHHHHHHHHHHHHHHHHTTCCGGGCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCSCCTTSSSCCCCTTTTGGGTSHHH
T ss_pred HHHHHHHHhhcCcccccCCCCCCCceEEEEEEEEEeccCCCceeeeEEEEEECCCCCcccccccchhhHHHHHhhhhHHH
Confidence 9999999999999999999999999999999996 4689999999999999999999999999999999999
Q ss_pred hhhhhHHHhcCch
Q psy7226 240 YLEQEEEEEKGKE 252 (279)
Q Consensus 240 aL~~vi~aL~~~~ 252 (279)
+|++||.||++++
T Consensus 264 aLg~vI~aL~~~~ 276 (355)
T 1goj_A 264 ALGMVINALTDGK 276 (355)
T ss_dssp HHHHHHHHHHHCS
T ss_pred HHHHHHHHHhcCC
Confidence 9999999998753
No 14
>3cob_A Kinesin heavy chain-like protein; motor, switch II, loop L11, conformation, nucleotide, ATP-binding, microtubule, motor protein; HET: ADP; 2.20A {Solanum tuberosum} SCOP: c.37.1.9 PDB: 3cnz_A* 1sdm_A* 3h4s_A*
Probab=100.00 E-value=5e-62 Score=451.17 Aligned_cols=209 Identities=27% Similarity=0.369 Sum_probs=195.3
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc----
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK---- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~---- 94 (279)
.+.|.||+||+++++|++||+. +.|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 46 ~~~f~FD~Vf~~~~~Q~~Vy~~-~~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~ 124 (369)
T 3cob_A 46 AKQHMYDRVFDGNATQDDVFED-TKYLVQSAVDGYNVCIFAYGQTGSGKTFTIYGADSNPGLTPRAMSELFRIMKKDSNK 124 (369)
T ss_dssp EEEEECSEEECTTCCHHHHHHT-TTHHHHHHHTTCEEEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHHHHHHTTTT
T ss_pred ceEEecCEEECCCCCcceehhh-hhhhhHhhhcCCceEEEEECCCCCCCeEeecCCCCCCchhHHHHHHHHHHHHhhccC
Confidence 4789999999999999999999 6999999999999999999999999999997 8999999999988753
Q ss_pred --cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccceeEE
Q psy7226 95 --DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 --~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|++||+|||||+++|||+|.. .....+.+++++.+++++.|++++.|.+++|++.+|
T Consensus 125 ~~~~v~vS~~EIYnE~i~DLL~~~~-------------------~~~~~l~i~e~~~~~~~v~gl~~~~v~s~~e~~~ll 185 (369)
T 3cob_A 125 FSFSLKAYMVELYQDTLVDLLLPKQ-------------------AKRLKLDIKKDSKGMVSVENVTVVSISTYEELKTII 185 (369)
T ss_dssp EEEEEEEEEEEECSSCEEESSCCSS-------------------SCCCCCEEEECTTSCEEEETCCCEEECSHHHHHHHH
T ss_pred ceeEEEEEEEEEeCceeeecCCCcc-------------------cCCcceEEEECCCCCEEccCCEEEEeCCHHHHHHHH
Confidence 78999999999999999998542 223568889999999999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhhh
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLEQ 243 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~~ 243 (279)
..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||++|++
T Consensus 186 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~ 265 (369)
T 3cob_A 186 QRGSEQRHTTGTLMNEQSSRSHLIVSVIIESTNLQTQAIARGKLSFVDLAGSERVKKSGSAGNQLKEAQSINKSLSALGD 265 (369)
T ss_dssp HHHHHHTCCCSCCTTCHHHHSEEEEEEEEEEEETTTCCEEEEEEEEEECCCSSCCCCCSSCSHHHHHHHHHTHHHHHHHH
T ss_pred HHHhhcceeecccCCCCCCcceEEEEEEEEEecCCCCcEEEEEEEEEeCCCCCcccccCccchhhHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 46899999999999999999999999999999999999999
Q ss_pred hHHHhcCchh
Q psy7226 244 EEEEEKGKEE 253 (279)
Q Consensus 244 vi~aL~~~~~ 253 (279)
||.||++++.
T Consensus 266 vI~aL~~~~~ 275 (369)
T 3cob_A 266 VISALSSGNQ 275 (369)
T ss_dssp HHHHHHTTCS
T ss_pred HHHHHhcCCC
Confidence 9999998643
No 15
>1f9v_A Kinesin-like protein KAR3; kinesin-related protein, motor protein, microtubinding proteinbule, contractIle protein; HET: ADP; 1.30A {Saccharomyces cerevisiae} SCOP: c.37.1.9 PDB: 1f9t_A* 1f9w_A* 1f9u_A* 3kar_A*
Probab=100.00 E-value=3.2e-61 Score=443.35 Aligned_cols=214 Identities=30% Similarity=0.388 Sum_probs=176.8
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh----HHHHHHHHHHHHHcCc------
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS----AMIMKTLQHVMQRCNK------ 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~----Gii~r~l~~lf~~~~~------ 94 (279)
.+.|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 51 ~~~f~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~Giipr~~~~lF~~i~~~~~~~~ 129 (347)
T 1f9v_A 51 VHEFKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVCIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGW 129 (347)
T ss_dssp EEEEEESEEECTTCCHHHHHHHH-HHHHGGGGGTCCEEEEEECCTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTC
T ss_pred ceEEeeCEEECCCCCHHHHHHHH-HHHHHHhcCCceeEEEEECCCCCCCcEeccCCCCCchHHHHHHHHHHHHhhhhcCC
Confidence 46899999999999999999985 799999999999999999999999999997 9999999999987642
Q ss_pred -cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCC-CCCCcccccchhhhccccccceeEE
Q psy7226 95 -DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPAS-PGNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 -~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|++||+|||||+|+|||++....... ......+.++++ ..+++++.|++++.|.+++|++.+|
T Consensus 130 ~~~v~vS~~EIYnE~i~DLL~~~~~~~~~-------------~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 196 (347)
T 1f9v_A 130 DYKVNCEFIEIYNENIVDLLRSDNNNKED-------------TSIGLKHEIRHDQETKTTTITNVTSCKLESEEMVEIIL 196 (347)
T ss_dssp EEEEEEEEEEEETTEEEETTC--------------------------CCCEEEETTTTEEEETTCCCEECSSGGGHHHHH
T ss_pred ceEEEEEEEEEECCeeeeccCCccccccc-------------cccCCceeEEEecCCCceEecCCEEEEcCCHHHHHHHH
Confidence 7899999999999999999865321000 001133455544 4578999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhhh
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLEQ 243 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~~ 243 (279)
..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||++|++
T Consensus 197 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~aLg~ 276 (347)
T 1f9v_A 197 KKANKLRSTASTASNEHSSASHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSCLGD 276 (347)
T ss_dssp HHHC-----------CCGGGSEEEEEEEEEEECC--CCEEEEEEEEEECCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhccceeeccCCCCCCCceEEEEEEEEEecCCCCceeeeEEEEEECCCCccccccccchhhhHHHHHHhHHHHHHHH
Confidence 999999999999999999999999999996 45899999999999999999999999999999999999999
Q ss_pred hHHHhcCch
Q psy7226 244 EEEEEKGKE 252 (279)
Q Consensus 244 vi~aL~~~~ 252 (279)
||.||++++
T Consensus 277 vI~aL~~~~ 285 (347)
T 1f9v_A 277 VIHALGQPD 285 (347)
T ss_dssp HHHHHTSCC
T ss_pred HHHHHhccc
Confidence 999999875
No 16
>3gbj_A KIF13B protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, ATP-binding, microtubule, motor protein; HET: ADP; 2.10A {Homo sapiens} SCOP: c.37.1.9
Probab=100.00 E-value=2.3e-61 Score=445.38 Aligned_cols=208 Identities=31% Similarity=0.425 Sum_probs=169.4
Q ss_pred ceeEeeeccc--------CCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHH
Q psy7226 25 HQVFIFDNIF--------GPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQ 90 (279)
Q Consensus 25 ~~~f~FD~Vf--------~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~ 90 (279)
.+.|.||+|| ++.++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||.
T Consensus 50 ~k~F~FD~vF~~~d~~~~~~~a~Q~~vy~~~~~~lv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~Giipr~~~~lF~ 129 (354)
T 3gbj_A 50 PKVFAYDHCFWSMDESVKEKYAGQDIVFKCLGENILQNAFDGYNACIFAYGQTGSGKSYTMMGTADQPGLIPRLCSGLFE 129 (354)
T ss_dssp CEEEECSEEEECSCTTCTTTBCCHHHHHHHHHHHHHHHHHTTCCEEEEEEECTTSSHHHHHTBCSSSBCHHHHHHHHHHH
T ss_pred ceEEEeeEEeccCccccccccccHHHHHHHhhHHHHHHHhCCceeEEEeeCCCCCCCceEEecCCCCCchhhHHHHHHHH
Confidence 5689999999 45688999999999999999999999999999999999999997 899999999998
Q ss_pred HcCc-------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcc
Q psy7226 91 RCNK-------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLD 163 (279)
Q Consensus 91 ~~~~-------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~ 163 (279)
.+.. +.|++||+|||||+|+|||+|.. ....+.+++++..++++.|++++.|.
T Consensus 130 ~i~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~--------------------~~~~l~i~e~~~~g~~v~gl~~~~v~ 189 (354)
T 3gbj_A 130 RTQKEENEEQSFKVEVSYMEIYNEKVRDLLDPKG--------------------SRQTLKVREHSVLGPYVDGLSKLAVT 189 (354)
T ss_dssp HHHHHCBTTEEEEEEEEEEEEETTEEEETTC--------------------------CBCBC------CCBTTCCCEEEC
T ss_pred HHHhhcccccceeeeceeEEEecCeeeEccCCCC--------------------CCcceEEEEcCCCCEEEEeeEEEecC
Confidence 7642 78999999999999999998531 12568899999999999999999999
Q ss_pred ccccceeEEEecccceeeEEEeecccccCceeeeeeehh-------------hhhhhhhccccCccceecccchhhhhhh
Q psy7226 164 SLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG-------------AMAKLHLVDLAGSEQLFSLSDNYLLRNE 230 (279)
Q Consensus 164 s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~-------------~~s~l~~VDLAGsEr~~~~~~~g~r~~E 230 (279)
+++|++.+|..|.++|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|
T Consensus 190 s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E 269 (354)
T 3gbj_A 190 SYKDIESLMSEGNKSRTVAATNMNEESSRSHAVFKITLTHTLYDVKSGTSGEKVGKLSLVDLAGSERATKTGAAGDRLKE 269 (354)
T ss_dssp SHHHHHHHHHHHHHCC----------CTTSEEEEEEEEEEEEECTTSCEEEEEEEEEEEEECCCCCCCCCCC------CH
T ss_pred CHHHHHHHHHHHHhcCCeeecCCCCCCCcccEEEEEEEEEEecccCCCCCCeeEEEEEEEECCCCCchhhcCCccccchh
Confidence 999999999999999999999999999999999999985 3589999999999999999999999999
Q ss_pred hcccccccchhhhhHHHhcCch
Q psy7226 231 ARKINLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 231 ~~~IN~SL~aL~~vi~aL~~~~ 252 (279)
+..||+||++|++||.||+++.
T Consensus 270 ~~~IN~SL~aLg~vI~aL~~~~ 291 (354)
T 3gbj_A 270 GSNINKSLTTLGLVISALADQS 291 (354)
T ss_dssp HHHHHHHHHHHHHHHHHHHHC-
T ss_pred HHHhhHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999754
No 17
>2heh_A KIF2C protein; kinesin, motor domain, ADP, structural genomics, structural genomics consortium, SGC, structural protein; HET: ADP; 2.15A {Homo sapiens} PDB: 3edl_D*
Probab=100.00 E-value=1.6e-61 Score=449.32 Aligned_cols=207 Identities=30% Similarity=0.414 Sum_probs=172.1
Q ss_pred eeceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------------HHHHHHHHHHHH
Q psy7226 23 FDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------------AMIMKTLQHVMQ 90 (279)
Q Consensus 23 ~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------------Gii~r~l~~lf~ 90 (279)
...+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. ||+||++++||.
T Consensus 98 ~~~~~F~FD~VF~~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipr~~~~lF~ 177 (387)
T 2heh_A 98 LENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKAQNASKGIYAMASRDVFL 177 (387)
T ss_dssp EEEEEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEESCTTSSHHHHHC-----------CCHHHHHHHHHHH
T ss_pred ccccEEeeeEEEecCCCceeehhhhHHHHHHHHhcCCceEEEEecCCCCCCCeEeccCCCCCCcccCCceehhhHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999997 499999999998
Q ss_pred HcCc-------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcc
Q psy7226 91 RCNK-------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLD 163 (279)
Q Consensus 91 ~~~~-------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~ 163 (279)
.+.. +.|++||+|||||+|+|||++. ..+.+++++.+++++.||+++.|.
T Consensus 178 ~~~~~~~~~~~~~V~vS~~EIYnE~v~DLL~~~-----------------------~~l~i~ed~~~~v~v~gl~~~~V~ 234 (387)
T 2heh_A 178 LKNQPCYRKLGLEVYVTFFEIYNGKLFDLLNKK-----------------------AKLRVLEDGKQQVQVVGLQEHLVN 234 (387)
T ss_dssp HHTSHHHHTTTCEEEEEEEEEETTEEEETTTTT-----------------------EECEEEECTTCCEEEETCCCEEES
T ss_pred HhhcccccCceEEEEEEEEEecCCeEEECCCCC-----------------------ccceEEEcCCCCEEecCCEEEEeC
Confidence 8753 7899999999999999999854 346778899999999999999999
Q ss_pred ccccceeEEEecccceeeEEEeecccccCceeeeeeehh----hhhhhhhccccCccceeccc-chhhhhhhhccccccc
Q psy7226 164 SLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG----AMAKLHLVDLAGSEQLFSLS-DNYLLRNEARKINLSL 238 (279)
Q Consensus 164 s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~----~~s~l~~VDLAGsEr~~~~~-~~g~r~~E~~~IN~SL 238 (279)
+++|++++|..|.++|.+++|.+|..|||||+||+|.|. ..|+|+|||||||||..+++ ..+.+++|+..||+||
T Consensus 235 s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL 314 (387)
T 2heh_A 235 SADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAKGRMHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSL 314 (387)
T ss_dssp SHHHHHHHHHHHHHHC---------CGGGSEEEEEEEEESSSSEEEEEEEEECCCCC---------------CHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCcccCcCcCCcccceEEEEEEEEECCeeeeEEEEEECCCCccccccccccccchhhHHHHhHHH
Confidence 999999999999999999999999999999999999997 57999999999999998875 4678889999999999
Q ss_pred chhhhhHHHhcCch
Q psy7226 239 HYLEQEEEEEKGKE 252 (279)
Q Consensus 239 ~aL~~vi~aL~~~~ 252 (279)
++|++||.||++++
T Consensus 315 ~aLg~vI~aL~~~~ 328 (387)
T 2heh_A 315 LALKECIRALGQNK 328 (387)
T ss_dssp HHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999998753
No 18
>1v8k_A Kinesin-like protein KIF2C; microtubule destabilizer, structural P; HET: ANP; 2.25A {Mus musculus} SCOP: c.37.1.9 PDB: 1v8j_A* 2gry_A*
Probab=100.00 E-value=2.4e-61 Score=450.77 Aligned_cols=207 Identities=30% Similarity=0.410 Sum_probs=174.7
Q ss_pred eeceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------------HHHHHHHHHHHH
Q psy7226 23 FDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------------AMIMKTLQHVMQ 90 (279)
Q Consensus 23 ~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------------Gii~r~l~~lf~ 90 (279)
...+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. ||+|+++++||.
T Consensus 118 ~~~~~F~FD~VF~~~~tQ~~Vy~~~~~plV~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~~~~Giipra~~~lF~ 197 (410)
T 1v8k_A 118 LENQAFCFDFAFDETASNEVVYRFTARPLVQTIFEGGKATCFAYGQTGSGKTHTMGGDLSGKSQNASKGIYAMASRDVFL 197 (410)
T ss_dssp EEEEEEECSEEECTTCCHHHHHHHTTHHHHHHHHTTCEEEEEEEESTTSSHHHHHHCBC----CBGGGSHHHHHHHHHHH
T ss_pred ccceEEeeeEEEecCCChhhhhHHHHHHHHHHHhcCCceeEEeecCCCCCCCeEeecCCCCCCccccCcchhhhHHHHHH
Confidence 45678999999999999999999999999999999999999999999999999997 599999999998
Q ss_pred HcCc-------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcc
Q psy7226 91 RCNK-------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLD 163 (279)
Q Consensus 91 ~~~~-------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~ 163 (279)
.+.. +.|++||+|||||+|+|||++. ..+.+++++.+++++.||+++.|.
T Consensus 198 ~~~~~~~~~~~~~V~vS~lEIYnE~i~DLL~~~-----------------------~~l~i~ed~~~~v~V~gl~e~~V~ 254 (410)
T 1v8k_A 198 LKNQPRYRNLNLEVYVTFFEIYNGKVFDLLNKK-----------------------AKLRVLEDSRQQVQVVGLQEYLVT 254 (410)
T ss_dssp HHTSHHHHTTCCEEEEEEEEEETTEEEETTTTT-----------------------EEEEEEECSSCCEEEETCCCEEES
T ss_pred HHhhhcccCccEEEEEEEEEeeCCEEEECCCCC-----------------------CCceEEECCCCCeEecCCEEEEeC
Confidence 7753 7899999999999999999854 245677888999999999999999
Q ss_pred ccccceeEEEecccceeeEEEeecccccCceeeeeeehh----hhhhhhhccccCccceeccc-chhhhhhhhccccccc
Q psy7226 164 SLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG----AMAKLHLVDLAGSEQLFSLS-DNYLLRNEARKINLSL 238 (279)
Q Consensus 164 s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~----~~s~l~~VDLAGsEr~~~~~-~~g~r~~E~~~IN~SL 238 (279)
|++|++.+|..|..+|.+++|.+|..|||||+||+|.|. ..|+|+|||||||||..+++ ..+.+++|+..||+||
T Consensus 255 s~~e~~~ll~~G~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~skL~lVDLAGSER~~~t~~~~~~~~~E~~~INkSL 334 (410)
T 1v8k_A 255 CADDVIKMINMGSACRTSGQTFANSNSSRSHACFQILLRTKGRLHGKFSLVDLAGNERGADTSSADRQTRMEGAEINKSL 334 (410)
T ss_dssp SHHHHHHHHHHHHHTCC--------CCCSSEEEEEEEEESSSSEEEEEEEEECCCCCC------------TTHHHHHHHH
T ss_pred CHHHHHHHHHHHHhhCCcccccCCCCCCCceEEEEEEEEeCCcceeEEEEEECCCccccccccccccchhHHHHHHhHHH
Confidence 999999999999999999999999999999999999997 46999999999999998876 4678889999999999
Q ss_pred chhhhhHHHhcCch
Q psy7226 239 HYLEQEEEEEKGKE 252 (279)
Q Consensus 239 ~aL~~vi~aL~~~~ 252 (279)
++||+||.||++++
T Consensus 335 ~aLg~vI~aL~~~~ 348 (410)
T 1v8k_A 335 LALKECIRALGQNK 348 (410)
T ss_dssp HHHHHHHHHHTC--
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999998754
No 19
>2rep_A Kinesin-like protein KIFC1; structural genomics consortium, motor domain, ADP, binding, cell cycle, cell division, endosome, microtubule; HET: ADP; 2.60A {Homo sapiens}
Probab=100.00 E-value=4.3e-61 Score=445.89 Aligned_cols=210 Identities=28% Similarity=0.392 Sum_probs=162.9
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh----------HHHHHHHHHHHHHcCc
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS----------AMIMKTLQHVMQRCNK 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~----------Gii~r~l~~lf~~~~~ 94 (279)
.+.|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||. |||||++++||..+..
T Consensus 82 ~~~F~FD~Vf~~~~~Q~~Vy~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~G~~~~~~~~~Giipr~~~~lF~~i~~ 160 (376)
T 2rep_A 82 RHDFSFDRVFPPGSGQDEVFEEI-AMLVQSALDGYPVCIFAYGQTGSGKTFTMEGGPGGDPQLEGLIPRALRHLFSVAQE 160 (376)
T ss_dssp -CEEECSEEECTTCCHHHHHHHH-HHHHHGGGGTCCEEEEEECSTTSSHHHHHTBCSSCCGGGBCHHHHHHHHHHHHHHH
T ss_pred ceeeeecEEcCCcccchhhhhhH-HHHHHHhcCCCceEEEEeCCCCCCCceEeecCCCCCcccCCcHHHHHHHHHHHHHH
Confidence 46799999999999999999985 699999999999999999999999999997 6999999999987642
Q ss_pred -------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCC--CCCCcccccchhhhcccc
Q psy7226 95 -------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPAS--PGNGRSAASLTVKKLDSL 165 (279)
Q Consensus 95 -------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~l~~~~v~s~ 165 (279)
+.|++||+|||||+|+|||++... ......+.++++ +.+++++.|++++.|.++
T Consensus 161 ~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~~-----------------~~~~~~l~ir~~~~~~~~~~v~gl~~~~V~s~ 223 (376)
T 2rep_A 161 LSGQGWTYSFVASYVEIYNETVRDLLATGTR-----------------KGQGGECEIRRAGPGSEELTVTNARYVPVSCE 223 (376)
T ss_dssp GGGGTEEEEEEEEEEEEETTEEEETTCCC-------------------------CCEEEC---CCCEEETTCCCEEECSH
T ss_pred hhcCCeEEEEEEEEEEEECCEeeEccccccc-----------------cccCCCceEEeccCCCCCEEECCcEEEEeCCH
Confidence 789999999999999999985421 111234566666 578899999999999999
Q ss_pred ccceeEEEecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchh----hhhhhhc
Q psy7226 166 NSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNY----LLRNEAR 232 (279)
Q Consensus 166 ~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g----~r~~E~~ 232 (279)
+|++.+|..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.| .|++|+.
T Consensus 224 ~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~~~~~rlkE~~ 303 (376)
T 2rep_A 224 KEVDALLHLARQNRAVARTAQNERSSRSHSVFQLQISGEHSSRGLQCGAPLSLVDLAGSERLDPGLALGPGERERLRETQ 303 (376)
T ss_dssp HHHHHHHHHHHHHHHHCC-----CGGGSEEEEEEEEEEEESSSCCEEEEEEEEEECCCCC--------------------
T ss_pred HHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEEEecCCCcEEEeEEEEEECCCCcccccccccCccccchhhHHh
Confidence 9999999999999999999999999999999999997 35899999999999999999988 9999999
Q ss_pred ccccccchhhhhHHHhcCch
Q psy7226 233 KINLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 233 ~IN~SL~aL~~vi~aL~~~~ 252 (279)
.||+||++|++||.||++++
T Consensus 304 ~INkSL~aLg~vI~aL~~~~ 323 (376)
T 2rep_A 304 AINSSLSTLGLVIMALSNKE 323 (376)
T ss_dssp ----CHHHHHHHHHHHHTTC
T ss_pred HhhHHHHHHHHHHHHHhcCC
Confidence 99999999999999999754
No 20
>3t0q_A AGR253WP; kinesin, alpha and beta proteins, P-loop containing nucleosi triphosphate hydrolases, microtubule motor protein; HET: ADP; 2.35A {Ashbya gossypii}
Probab=100.00 E-value=1.1e-60 Score=440.35 Aligned_cols=217 Identities=30% Similarity=0.407 Sum_probs=171.8
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh----HHHHHHHHHHHHHcCc------
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS----AMIMKTLQHVMQRCNK------ 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~----Gii~r~l~~lf~~~~~------ 94 (279)
.+.|.||+||+++++|++||+++ .|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 52 ~~~f~FD~Vf~~~~~Q~~vf~~v-~~lv~~~l~G~n~tifAYGqTGSGKTyTm~g~~~Giipr~~~~lF~~~~~~~~~~~ 130 (349)
T 3t0q_A 52 SYNFQFDMIFEPSHTNKEIFEEI-RQLVQSSLDGYNVCIFAYGQTGSGKTYTMLNAGDGMIPMTLSHIFKWTANLKERGW 130 (349)
T ss_dssp EEEEEESEEECTTCCHHHHHHHH-HHHHHGGGTTCEEEEEEECSTTSSHHHHHHSTTTSHHHHHHHHHHHHHHHHGGGTE
T ss_pred ceeeecCEEECCCccHHHHHHHH-HHHHHHHHCCcceeEEEeCCCCCCCceEeCCCCCchhhHHHHHHHHHHHHhhhcCc
Confidence 45899999999999999999985 799999999999999999999999999997 9999999999986543
Q ss_pred -cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCC-CCCcccccchhhhccccccceeEE
Q psy7226 95 -DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASP-GNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 -~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|.+||+|||||+|+|||.+....... ........+.+++++ .+++++.|++++.|.+++|++.+|
T Consensus 131 ~~~v~vS~~EIYnE~i~DLL~~~~~~~~~-----------~~~~~~~~~~i~~~~~~~g~~v~~l~~~~v~s~~e~~~ll 199 (349)
T 3t0q_A 131 NYEMECEYIEIYNETILDLLRDFKSHDNI-----------DEILDSQKHDIRHDHEKQGTYITNVTRMKMTSTSQVDTIL 199 (349)
T ss_dssp EEEEEEEEEEEETTEEEETTC--------------------------CCCEEEETTTTEEEETTCCCEECCCHHHHHHHH
T ss_pred eeEEEEEEEEEEcchhhcccccccccccc-----------ccccccccceeEEecCCCCEEEeCCEEEEeCCHHHHHHHH
Confidence 7899999999999999999864321100 000112345555543 567999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhhh
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLEQ 243 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~~ 243 (279)
..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+.+||+||++||+
T Consensus 200 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~ 279 (349)
T 3t0q_A 200 KKASKMRSTAATRSNERSSRSHSVFMVHINGRNLHTGETSQGKLNLVDLAGSERINSSAVTGERLRETQNINKSLSCLGD 279 (349)
T ss_dssp HHC------------CTGGGSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCC----CCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhCcccccccccccCCcceEEEEEEEEEecCCCCeeEEEEEEEeCCCCCccccccCccccchhHHhhhHhHHHHHH
Confidence 999999999999999999999999999996 46899999999999999999999999999999999999999
Q ss_pred hHHHhcCchh
Q psy7226 244 EEEEEKGKEE 253 (279)
Q Consensus 244 vi~aL~~~~~ 253 (279)
||.||++++.
T Consensus 280 vI~aL~~~~~ 289 (349)
T 3t0q_A 280 VIYALNTPDA 289 (349)
T ss_dssp HHHHHHSTTG
T ss_pred HHHHHhcccC
Confidence 9999988653
No 21
>3dc4_A Kinesin-like protein NOD; catalytic domain, ATPase, microtubule, ADP, nucleotide-binding protein, ATP-binding, coiled coil, motor protein; HET: ADP; 1.90A {Drosophila melanogaster} PDB: 3dcb_A* 3dco_N* 3pxn_A*
Probab=100.00 E-value=1.6e-60 Score=437.74 Aligned_cols=207 Identities=30% Similarity=0.494 Sum_probs=164.6
Q ss_pred EEEEeeceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------------HHHHHHHH
Q psy7226 19 IWLFFDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------------AMIMKTLQ 86 (279)
Q Consensus 19 ~~~~~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------------Gii~r~l~ 86 (279)
..+..+.+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||. |||||+++
T Consensus 54 ~~~~~~~~~F~FD~Vf~~~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~g~~~~~~~~~~~GIipra~~ 133 (344)
T 3dc4_A 54 KSLIVDQNEFHFDHAFPATISQDEMYQALILPLVDKLLEGFQCTALAYGQTGTGKSYSMGMTPPGEILPEHLGILPRALG 133 (344)
T ss_dssp SEEEETTEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHTCCEEEEEESSTTSSHHHHHTCSCGGGSCGGGCCHHHHHHH
T ss_pred ceEEecCcEEEcceEECCCCCHHHHHHhhccchhhHhhCCCceEEEEecCCCCCCCeEEcCCCCCCCCcccCCcHHHHHH
Confidence 346677899999999999999999999999999999999999999999999999999994 99999999
Q ss_pred HHHHHcCc--------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccch
Q psy7226 87 HVMQRCNK--------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLT 158 (279)
Q Consensus 87 ~lf~~~~~--------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~ 158 (279)
+||..+.. +.|++||+|||||+++|||++.. ..+. ......+++
T Consensus 134 ~LF~~i~~~~~~~~~~~~v~vS~~EIYnE~i~DLL~~~~---------------------~~~~-------~~~~~~~~~ 185 (344)
T 3dc4_A 134 DIFERVTARQENNKDAIQVYASFIEIYNEKPFDLLGSTP---------------------HMPM-------VAARCQRCT 185 (344)
T ss_dssp HHHHHHHHSSSSCSSCCEEEEEEEEEESSCEEETTSSCT---------------------TSBC-------CSSTTTCSC
T ss_pred HHHHHHHhhhhccccceEEEEEEEEEeCCeeEEccCCCC---------------------CCcc-------ccccccCce
Confidence 99997642 78999999999999999998432 0111 122345789
Q ss_pred hhhccccccceeEEEecccceeeEEEeecccccCceeeeeeehh---hhhhhhhccccCccceecccchhhhhhhhcccc
Q psy7226 159 VKKLDSLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG---AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKIN 235 (279)
Q Consensus 159 ~~~v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN 235 (279)
++.|.+++|++.+|..|.++|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|+.+||
T Consensus 186 ~~~v~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~Ifti~v~~~~~~skl~lVDLAGSEr~~~t~~~g~r~~E~~~IN 265 (344)
T 3dc4_A 186 CLPLHSQADLHHILELGTRNRRVRPTNMNSNSSRSHAIVTIHVKSKTHHSRMNIVDLAGSEGVRRTGHEGVARQEGVNIN 265 (344)
T ss_dssp CEECSSHHHHHHHHHHHHHTCC----------CCEEEEEEEEEECSSCEEEEEEEECCCCCCC-------------CCSC
T ss_pred ecccCCHHHHHHHHHHHHhhcccccccCCCCCCCceEEEEEEEEecCcEEEEEEEECCCCccccccccccchhHHHHHHh
Confidence 99999999999999999999999999999999999999999997 679999999999999999999999999999999
Q ss_pred cccchhhhhHHHhcCchh
Q psy7226 236 LSLHYLEQEEEEEKGKEE 253 (279)
Q Consensus 236 ~SL~aL~~vi~aL~~~~~ 253 (279)
+||++|++||.||++++.
T Consensus 266 kSL~aLg~vI~aL~~~~~ 283 (344)
T 3dc4_A 266 LGLLSINKVVMSMAAGHT 283 (344)
T ss_dssp CHHHHHHHHHHHHHTTCS
T ss_pred HhHHHHHHHHHHHhccCC
Confidence 999999999999997653
No 22
>2wbe_C Bipolar kinesin KRP-130; EG5, KLP61F, tubulin, mitosis, GTP-binding, motor protein, cell division, cell cycle, microtubule, ATP-binding; HET: GTP ANP GDP TA1; 9.40A {Drosophila melanogaster}
Probab=100.00 E-value=2.5e-61 Score=447.61 Aligned_cols=207 Identities=34% Similarity=0.476 Sum_probs=172.0
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh-----------------HHHHHHHHH
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS-----------------AMIMKTLQH 87 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~-----------------Gii~r~l~~ 87 (279)
.+.|.||+||+++++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++
T Consensus 66 ~~~F~FD~vf~~~~~Q~~Vy~~~~~plv~~~l~G~n~tifAYGqTGSGKTyTm~G~~~~~~~~~~~~~~~~Giipr~~~~ 145 (373)
T 2wbe_C 66 TKKFTFDRSFGPESKQCDVYSVVVSPLIEEVLNGYNCTVFAYGQTGTGKTHTMVGNETAELKSSWEDDSDIGIIPRALSH 145 (373)
T ss_dssp CEEEECSEEECTTCCHHHHHHHHHHHHHHHHHHTCCEEEEEECSTTSSHHHHHTBSCSCCSSSCSSCTTTBCHHHHHHHH
T ss_pred ceEEeccEEeccccchhHHHHHHHHHHHHHHhCCceEEEEeecCCCCCcceecccCccccccccccccCCCcChHHHHHH
Confidence 468999999999999999999999999999999999999999999999999996 799999999
Q ss_pred HHHHcCc----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCC--CCCCcccccchhhh
Q psy7226 88 VMQRCNK----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPAS--PGNGRSAASLTVKK 161 (279)
Q Consensus 88 lf~~~~~----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~l~~~~ 161 (279)
||..+.. +.|++||+|||||+++|||++. ....+.++++ ..+++++.||+++.
T Consensus 146 lF~~i~~~~~~~~v~vS~~EIYnE~i~DLL~~~---------------------~~~~l~i~~~~~~~g~v~v~gl~~~~ 204 (373)
T 2wbe_C 146 LFDELRMMEVEYTMRISYLELYNEELCDLLSTD---------------------DTTKIRIFDDSTKKGSVIIQGLEEIP 204 (373)
T ss_dssp HHHHHHHCCSCEEEEEEEEEEETTEEEESSCTT---------------------SCSCCCEEECSSSSSCEEETTCCCEE
T ss_pred HHHHHHhcCceEEEEEEEEEEeCCeEEECCCCC---------------------CCCCceeEeccCCCCcEEecCceEEc
Confidence 9998753 8999999999999999999843 1234555555 45779999999999
Q ss_pred ccccccceeEEEecccceeeEEEeecccccCceeeeeeehh------------hhhhhhhccccCccceecccch-hhhh
Q psy7226 162 LDSLNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG------------AMAKLHLVDLAGSEQLFSLSDN-YLLR 228 (279)
Q Consensus 162 v~s~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~------------~~s~l~~VDLAGsEr~~~~~~~-g~r~ 228 (279)
|.+++|++++|..|.++|.+++|.+|..|||||+||+|.|. ..|+|+|||||||||..++++. |.|+
T Consensus 205 V~s~~e~~~ll~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~~g~rl 284 (373)
T 2wbe_C 205 VHSKDDVYKLLEKGKERRKTATTLMNAQSSRSHTVFSIVVHIRENGIEGEDMLKIGKLNLVDLAGSENVSKAGNEKGIRV 284 (373)
T ss_dssp ESSHHHHHHHHHHHHHHHTTTCSCHHHHHHHSEEEEEEEEEECTTCTTTCCEEEEEEEEEEECCCC--------------
T ss_pred cCCHHHHHHHHHHHhhhhccccccCCCCCCCccEEEEEEEEEecCCCCCCcceeEEEEEEEECCCCCccccccCccccch
Confidence 99999999999999999999999999999999999999985 3589999999999999999887 9999
Q ss_pred hhhcccccccchhhhhHHHhcCch
Q psy7226 229 NEARKINLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 229 ~E~~~IN~SL~aL~~vi~aL~~~~ 252 (279)
+|+..||+||++|++||.||+++.
T Consensus 285 ~E~~~INkSL~aLg~vI~aL~~~~ 308 (373)
T 2wbe_C 285 RETVNINQSLLTLGRVITALVDRA 308 (373)
T ss_dssp ------CHHHHHHHHHHHHHHHCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHcCC
Confidence 999999999999999999998754
No 23
>3nwn_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.7e-61 Score=446.44 Aligned_cols=211 Identities=34% Similarity=0.497 Sum_probs=171.1
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh---------HHHHHHHHHHHHHcCc-
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS---------AMIMKTLQHVMQRCNK- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~---------Gii~r~l~~lf~~~~~- 94 (279)
.+.|.||+||+ +++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||+.+..
T Consensus 71 ~~~F~FD~Vf~-~~sQ~~Vy~~~~~plv~~~l~G~N~tifAYGQTGSGKTyTM~G~~~~~~~~Giipra~~~lF~~~~~~ 149 (359)
T 3nwn_A 71 DWSFKLDGVLH-DASQDLVYETVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEER 149 (359)
T ss_dssp EEEEECSEEEE-SCCHHHHHHHHTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTC
T ss_pred ceEeecCccCC-CCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCCCCCccEEeCCccCCccchhhHHHHHHHHHHHhhcC
Confidence 35799999997 689999999999999999999999999999999999999997 8999999999987654
Q ss_pred ----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcccccccee
Q psy7226 95 ----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQ 170 (279)
Q Consensus 95 ----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~ 170 (279)
+.|++||+|||||+++|||++.... ......+.+.+++ .|+++.+++++.|.+++|+++
T Consensus 150 ~~~~~~v~vS~~EIYnE~i~DLL~~~~~~----------------~~~~~~~~~~~~~-~g~~v~~l~~~~v~s~~e~~~ 212 (359)
T 3nwn_A 150 PTHAITVRVSYLEIYNESLFDLLSTLPYV----------------GPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDAFS 212 (359)
T ss_dssp TTSCEEEEEEEEEEETTEEEETTSSSTTS----------------CTTTSCCEEEEET-TEEEEETCCCEECSSHHHHHH
T ss_pred CCCcEEEEEEEEEEecccccccccccccc----------------ccccccceEEecC-CceEEeccEEEEecCHHHHHH
Confidence 7899999999999999999854210 0111233444444 578999999999999999999
Q ss_pred EEEecccceeeEEEeecccccCceeeeeeehh-----------hhhhhhhccccCccceecccchhhhhhhhcccccccc
Q psy7226 171 LIVTGNENKVTAVTKMNAQSSRSHTICTIYLG-----------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLH 239 (279)
Q Consensus 171 ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~-----------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~ 239 (279)
+|..|..+|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||+
T Consensus 213 ll~~g~~~R~~~~T~~N~~SSRSH~if~i~i~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~IN~SL~ 292 (359)
T 3nwn_A 213 LLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLS 292 (359)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------------CCSTHHH
T ss_pred HHHhhhhhcccccccCccccCcceEEEEEEEEeecccccCcccccccceeeeccccccccccCCchhHHHhhhhhcccHH
Confidence 99999999999999999999999999999995 4589999999999999999999999999999999999
Q ss_pred hhhhhHHHhcCchh
Q psy7226 240 YLEQEEEEEKGKEE 253 (279)
Q Consensus 240 aL~~vi~aL~~~~~ 253 (279)
+|++||.||++++.
T Consensus 293 ~Lg~vI~aL~~~~~ 306 (359)
T 3nwn_A 293 FLEQAIIALGDQKR 306 (359)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHHhcCC
Confidence 99999999987543
No 24
>4etp_A Kinesin-like protein KAR3; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=100.00 E-value=4.4e-60 Score=443.60 Aligned_cols=215 Identities=31% Similarity=0.391 Sum_probs=183.1
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh----HHHHHHHHHHHHHcCc------
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS----AMIMKTLQHVMQRCNK------ 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~----Gii~r~l~~lf~~~~~------ 94 (279)
.+.|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||+ |||||++++||..+..
T Consensus 107 ~~~F~FD~VF~~~~~Q~~Vf~~v-~~lv~~~l~G~N~tifAYGqTGSGKTyTM~g~~~Giipr~~~~lF~~i~~~~~~~~ 185 (403)
T 4etp_A 107 VHEFKFDKIFDQQDTNVDVFKEV-GQLVQSSLDGYNVAIFAYGQTGSGKTFTMLNPGDGIIPSTISHIFNWINKLKTKGW 185 (403)
T ss_dssp EEEEEESEEECTTCCHHHHHHHH-HHHHHHHHTTCCEEEEEESCTTSSHHHHHHCTTTSHHHHHHHHHHHHHHHHHTTTE
T ss_pred ceEEEcCEEECCCCchHHHHHHH-HHHHHHHhCCcceEEEEECCCCCCCceEeCCCCCccchhHHHHHHHHHHhhhccCc
Confidence 46899999999999999999985 699999999999999999999999999997 9999999999987643
Q ss_pred -cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCC-CCCcccccchhhhccccccceeEE
Q psy7226 95 -DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASP-GNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 -~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|++||+|||||+|+|||++...... .......+.+++++ .+++++.|++++.|.+++|++.+|
T Consensus 186 ~~~v~vS~~EIYnE~i~DLL~~~~~~~~-------------~~~~~~~~~i~~~~~~~~~~v~~l~~~~v~s~~e~~~ll 252 (403)
T 4etp_A 186 DYKVNAEFIEIYNENIVDLLRSDNNNKE-------------DTSIGLKHEIRHDQETKTTTITNVTSVKLESEEMVEIIL 252 (403)
T ss_dssp EEEEEEEEEEEETTEEEETTCC---------------------CCSCCCCEEEETTTTEEEETTCCCEECCCHHHHHHHH
T ss_pred eEEEEEEEEEEecceeeEccCCcccccc-------------ccccCcceeeEEeCCCCCEEecCcEEEEeCCHHHHHHHH
Confidence 789999999999999999986532110 01112344455544 567999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhhh
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLEQ 243 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~~ 243 (279)
..|.++|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.|.|++|+..||+||++||+
T Consensus 253 ~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~aLg~ 332 (403)
T 4etp_A 253 KKANKLRSTASTASNEHSSRSHSIFIIHLSGSNAKTGAHSYGTLNLVDLAGSERINVSQVVGDRLRETQNINKSLSALGD 332 (403)
T ss_dssp HHHC--C----CHHHHHHHTSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCCCCCSSCCHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcccccccCCcccCCcccEEEEEEEEeecCCCCeeEEEEEEEECCCCccccccCChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 46899999999999999999999999999999999999999
Q ss_pred hHHHhcCchh
Q psy7226 244 EEEEEKGKEE 253 (279)
Q Consensus 244 vi~aL~~~~~ 253 (279)
||.||++++.
T Consensus 333 vI~aL~~~~~ 342 (403)
T 4etp_A 333 VIHALGQPDS 342 (403)
T ss_dssp HHHHHTSSCT
T ss_pred HHHHHhcccC
Confidence 9999988653
No 25
>2nr8_A Kinesin-like protein KIF9; motor domain, ADP, structural genomics, structural genomics consortium, SGC, contractIle protein; HET: ADP; 2.00A {Homo sapiens} PDB: 3nwn_A*
Probab=100.00 E-value=7.6e-61 Score=441.97 Aligned_cols=211 Identities=34% Similarity=0.497 Sum_probs=174.6
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh---------HHHHHHHHHHHHHcCc-
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS---------AMIMKTLQHVMQRCNK- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~---------Gii~r~l~~lf~~~~~- 94 (279)
...|.||+||+ +++|++||+.++.|+|+++++|||+||||||||||||||||+ |||||++++||..+.+
T Consensus 70 ~~~F~fD~Vf~-~~sQ~~Vy~~~~~~lv~~~l~G~N~tIfAYGqTGSGKTyTM~G~~~~~~~~Giipra~~~lF~~i~~~ 148 (358)
T 2nr8_A 70 DWSFKLDGVLH-DASQDLVYETVAKDVVSQALDGYNGTIMCYGQTGAGKTYTMMGATENYKHRGILPRALQQVFRMIEER 148 (358)
T ss_dssp EEEEECSEEEE-SCCHHHHHHHHTHHHHHHHHTTCCEEEEEEESTTSSHHHHHTBCSSCGGGBCHHHHHHHHHHHHHHTC
T ss_pred ceEEECCeecC-CcCHHHHHHHHHHHHHHHHhCCCceEEEEECCCCCCCceEecccccccccCCcHHHHHHHHHHHHhhc
Confidence 35699999995 899999999999999999999999999999999999999995 8999999999998765
Q ss_pred ----cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhcccccccee
Q psy7226 95 ----DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQ 170 (279)
Q Consensus 95 ----~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~ 170 (279)
+.|++||+|||||+++|||++.... .....++.+++++ .++++.|++++.|.+++|++.
T Consensus 149 ~~~~~~v~vS~~EIYnE~i~DLL~~~~~~----------------~~~~~~l~i~e~~-~g~~v~gl~~~~v~s~~e~~~ 211 (358)
T 2nr8_A 149 PTHAITVRVSYLEIYNESLFDLLSTLPYV----------------GPSVTPMTIVENP-QGVFIKGLSVHLTSQEEDAFS 211 (358)
T ss_dssp TTSCEEEEEEEEEEETTEEEETTSSSTTS----------------CTTTSCCEEEEET-TEEEEETCCCEECSSHHHHHH
T ss_pred CCceEEEEEEEEEEeCCeeeECcCCcccc----------------CccCCceEEEECC-CceEecCCEEEEcCCHHHHHH
Confidence 7899999999999999999854210 1122567777877 679999999999999999999
Q ss_pred EEEecccceeeEEEeecccccCceeeeeeehh-----------hhhhhhhccccCccceecccchhhhhhhhcccccccc
Q psy7226 171 LIVTGNENKVTAVTKMNAQSSRSHTICTIYLG-----------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLH 239 (279)
Q Consensus 171 ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~-----------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~ 239 (279)
+|..|.++|.+++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||+
T Consensus 212 ll~~g~~~R~~~~T~~N~~SSRSH~If~i~v~~~~~~~~~~~~~~skL~lVDLAGSEr~~~t~~~g~rl~E~~~INkSL~ 291 (358)
T 2nr8_A 212 LLFEGETNRIIASHTMNKNSSRSHCIFTIYLEAHSRTLSEEKYITSKINLVDLAGSERLGKSGSEGQVLKEATYINKSLS 291 (358)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCEEEEEEEEEEC-------CCEEEEEEEEECCCCC----------------CCSTHHH
T ss_pred HHHHHHhccccccccCCCCCCcCeEEEEEEEEEEeccCCCCCEEEEEEEEEECCCCCcccccCCchhhHHHHHHHHHHHH
Confidence 99999999999999999999999999999996 3589999999999999999999999999999999999
Q ss_pred hhhhhHHHhcCchh
Q psy7226 240 YLEQEEEEEKGKEE 253 (279)
Q Consensus 240 aL~~vi~aL~~~~~ 253 (279)
+|++||.||++++.
T Consensus 292 aLg~vI~aL~~~~~ 305 (358)
T 2nr8_A 292 FLEQAIIALGDQKR 305 (358)
T ss_dssp HHHHHHHHHHC---
T ss_pred HHHHHHHHHHhCCC
Confidence 99999999987543
No 26
>1ry6_A Internal kinesin; kinesin motor domain, nucleotide-free, transport protein; 1.60A {Plasmodium falciparum} SCOP: c.37.1.9
Probab=100.00 E-value=8.4e-60 Score=435.28 Aligned_cols=207 Identities=26% Similarity=0.403 Sum_probs=183.4
Q ss_pred eeceeEeeecccCCCCCCcceehhhhHHhHHhhhc-chhhhhhhhcccCCCceEeeh-----------HHHHHHHHHHHH
Q psy7226 23 FDHQVFIFDNIFGPNDSNETIFTEVLVPLINHMFN-GINATLLAYGQTGGGKTYTVS-----------AMIMKTLQHVMQ 90 (279)
Q Consensus 23 ~~~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~-G~n~~i~aYG~tgSGKTyTm~-----------Gii~r~l~~lf~ 90 (279)
.+.+.|.||+||+++++|++||+.++.|+|+++++ |||+||||||||||||||||. |||||++++||.
T Consensus 47 ~~~~~F~FD~Vf~~~~~Q~~Vy~~~~~plv~~~~~~G~n~tifAYGqTGSGKTyTM~G~~~~~~~~~~Giipr~~~~lF~ 126 (360)
T 1ry6_A 47 IERHEFIVDKVFDDTVDNFTVYENTIKPLIIDLYENGCVCSCFAYGQTGSGKTYTMLGSQPYGQSDTPGIFQYAAGDIFT 126 (360)
T ss_dssp EEEEEEECSEEECTTCCHHHHHHHHTHHHHHHHHHHCCEEEEEEECCTTSSHHHHHHBSSSTTTSSCBCHHHHHHHHHHH
T ss_pred cccceEEeeeEecCCCCHHHHHHHHhhhhhhhhccCCceeEEEeeCCCCCCCCEEEecCCCCCCccCCCcHHHHHHHHHH
Confidence 34678999999999999999999999999999996 999999999999999999996 799999999998
Q ss_pred HcCc------cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccc
Q psy7226 91 RCNK------DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDS 164 (279)
Q Consensus 91 ~~~~------~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s 164 (279)
.+.. +.|++||+|||||+|+|||.+. ..+.+++++.+++++.|++++.|.+
T Consensus 127 ~i~~~~~~~~~~v~vS~~EIYnE~v~DLL~~~-----------------------~~~~~~e~~~~~~~v~gl~~~~V~s 183 (360)
T 1ry6_A 127 FLNIYDKDNTKGIFISFYEIYCGKLYDLLQKR-----------------------KMVAALENGKKEVVVKDLKILRVLT 183 (360)
T ss_dssp HHHHHCSSSCEEEEEEEEEEETTEEEESCCC----------------------------------CCBCGGGSCCEEECS
T ss_pred HHHhhccCCceEEEEEEEEeeCCeeEEcccCC-----------------------ccceeeEcCCCCEEEcCcEEEEeCC
Confidence 7643 7899999999999999999843 2355678888999999999999999
Q ss_pred cccceeEEEecccceeeEEEeecccccCceeeeeeehh------hhhhhhhccccCccceecccchh-hhhhhhcccccc
Q psy7226 165 LNSAVQLIVTGNENKVTAVTKMNAQSSRSHTICTIYLG------AMAKLHLVDLAGSEQLFSLSDNY-LLRNEARKINLS 237 (279)
Q Consensus 165 ~~e~~~ll~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~------~~s~l~~VDLAGsEr~~~~~~~g-~r~~E~~~IN~S 237 (279)
++|++++|..|..+|.+++|.+|..|||||+||+|++. ..|+|+|||||||||..++++.+ .+++|+..||+|
T Consensus 184 ~~e~~~~l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~skL~lVDLAGSEr~~~t~~~~~~~~~E~~~INkS 263 (360)
T 1ry6_A 184 KEELILKMIDGVLLRKIGVNSQNDESSRSHAILNIDLKDINKNTSLGKIAFIDLAGSERGADTVSQNKQTQTDGANINRS 263 (360)
T ss_dssp HHHHHHHHHHHHHHHHHCTTCCTTGGGGSEEEEEEEEEETTTTEEEEEEEEEECCCTTGGGGGGCSSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhhhhcccccccCCCccceEEEEEEEEeccCCcceeEEEEEECCCCccccccccccccchHHHHHHHHH
Confidence 99999999999999999999999999999999999997 46899999999999999988765 578999999999
Q ss_pred cchhhhhHHHhcCch
Q psy7226 238 LHYLEQEEEEEKGKE 252 (279)
Q Consensus 238 L~aL~~vi~aL~~~~ 252 (279)
|++|++||.||++++
T Consensus 264 L~aLg~vI~aL~~~~ 278 (360)
T 1ry6_A 264 LLALKECIRAMDSDK 278 (360)
T ss_dssp HHHHHHHHHHHTTST
T ss_pred HHHHHHHHHHHhcCC
Confidence 999999999998654
No 27
>3u06_A Protein claret segregational; motor domain, stalk rotation, power stroke, kinesin-14, MICR binding, NCD, transport, molecular motor; HET: ADP GOL; 2.35A {Drosophila melanogaster} PDB: 2ncd_A* 1n6m_A* 1cz7_A* 3l1c_A*
Probab=100.00 E-value=1.1e-58 Score=434.47 Aligned_cols=204 Identities=32% Similarity=0.448 Sum_probs=171.9
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh------HHHHHHHHHHHHHcCc----
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS------AMIMKTLQHVMQRCNK---- 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~------Gii~r~l~~lf~~~~~---- 94 (279)
.+.|.||+||+++++|++||+. +.|+|+++++|||+||||||||||||||||. |||||++++||..+..
T Consensus 105 ~~~F~FD~VF~~~~~Q~~Vf~~-v~plv~~~l~G~n~tifAYGqTGSGKTyTM~G~~~~~Giipr~~~~lF~~i~~~~~~ 183 (412)
T 3u06_A 105 QQIFSFDQVFHPLSSQSDIFEM-VSPLIQSALDGYNICIFAYGQTGSGKTYTMDGVPESVGVIPRTVDLLFDSIRGYRNL 183 (412)
T ss_dssp CCEEECSEEECTTCCHHHHHTT-THHHHHHHHTTCCEEEEEESSTTSSHHHHHTEETTEECHHHHHHHHHHHHHHHHGGG
T ss_pred ceEEeeCeEcCCCCCHHHHHHH-HHHHHHHHHCCCceEEEEecCCCCCCeeEecCCCCCCccHHHHHHHHHHhhhhhccc
Confidence 4689999999999999999986 5799999999999999999999999999997 8999999999987642
Q ss_pred ---cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccccccceeE
Q psy7226 95 ---DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDSLNSAVQL 171 (279)
Q Consensus 95 ---~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s~~e~~~l 171 (279)
+.|++||+|||||+|+|||++.. ....+.+.+++.+++++.|++++.|.+++|++.+
T Consensus 184 ~~~~~v~vS~~EIYnE~i~DLL~~~~--------------------~~~~i~~~~~~~~~~~v~gl~~~~v~s~~e~~~l 243 (412)
T 3u06_A 184 GWEYEIKATFLEIYNEVLYDLLSNEQ--------------------KDMEIRMAKNNKNDIYVSNITEETVLDPNHLRHL 243 (412)
T ss_dssp TEEEEEEEEEEEEETTEEEETTCCSC--------------------CCCCEEECSSCTTSEEETTCCCEECCSHHHHHHH
T ss_pred CceEEEEEEEEEEeCCeeEEcCCCCC--------------------CCceeeeeecCCCCEEEcceEEEEeCCHHHHHHH
Confidence 78999999999999999997431 1123445577889999999999999999999999
Q ss_pred EEecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhh
Q psy7226 172 IVTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLE 242 (279)
Q Consensus 172 l~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~ 242 (279)
|..|..+|.+++|.+|..|||||+||+|++. ..|+|+|||||||||.. .+.|++|+..||+||++||
T Consensus 244 l~~g~~~R~~~~T~~N~~SSRSH~if~i~v~~~~~~~~~~~~~kL~lVDLAGSEr~~----~~~rl~E~~~INkSL~aLg 319 (412)
T 3u06_A 244 MHTAKMNRATASTAGNERSSRSHAVTKLELIGRHAEKQEISVGSINLVDLAGSESPK----TSTRMTETKNINRSLSELT 319 (412)
T ss_dssp HHHHHHHCC-----CHHHHTTCEEEEEEEEEEEETTTTEEEEEEEEEEECCCCCC--------------CTTTHHHHHHH
T ss_pred HHHHHhcccccccCCCCCCcCceEEEEEEEEEEeCCCCCEEEEEEEEEECCCCCcCC----ccchhHhHHHHhHHHHHHH
Confidence 9999999999999999999999999999996 46899999999999974 4689999999999999999
Q ss_pred hhHHHhcCchh
Q psy7226 243 QEEEEEKGKEE 253 (279)
Q Consensus 243 ~vi~aL~~~~~ 253 (279)
+||.||++++.
T Consensus 320 ~vI~aL~~~~~ 330 (412)
T 3u06_A 320 NVILALLQKQD 330 (412)
T ss_dssp HHHHHHHTTCS
T ss_pred HHHHHHhccCC
Confidence 99999997643
No 28
>4h1g_A Maltose binding protein-cakar3 motor domain fusio; kinesin motor domain, motor protein, chimera; HET: MTT ADP EDO; 2.15A {Escherichia coli}
Probab=100.00 E-value=1.7e-57 Score=455.33 Aligned_cols=208 Identities=32% Similarity=0.454 Sum_probs=170.0
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh----HHHHHHHHHHHHHcCc------
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS----AMIMKTLQHVMQRCNK------ 94 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~----Gii~r~l~~lf~~~~~------ 94 (279)
++.|.||+||+++++|++||+.+ .|+|+++++|||+||||||||||||||||. |||||++++||..+..
T Consensus 429 ~~~f~fd~vf~~~~~q~~v~~~~-~~~v~~~~~G~n~~i~ayGqtgsGKT~Tm~g~~~Giipr~~~~lf~~~~~~~~~~~ 507 (715)
T 4h1g_A 429 NLRFLFDKIFEREQSNDLVFEEL-SQLIQCSLDGTNVCVFAYGQTGSGKTFTMSHPTNGMIPLSLKKIFNDIEELKEKGW 507 (715)
T ss_dssp EEEEECSEEECSSCCHHHHGGGT-HHHHHHHHTTCCEEEEEESSTTSSHHHHHHCTTTSHHHHHHHHHHHHHHHHGGGTE
T ss_pred CeEEEeceEeCCCCCHHHHHHHH-HHHHHHHhCCceEEEEccCCCCCchhhccCCCCCCcHHHHHHHHHHHHHHhhcCCc
Confidence 77999999999999999999875 799999999999999999999999999998 8999999999987653
Q ss_pred -cchhhhHHHHhhhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCC-CCCCCcccccchhhhccccccceeEE
Q psy7226 95 -DDVYMSYLQLYSEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPA-SPGNGRSAASLTVKKLDSLNSAVQLI 172 (279)
Q Consensus 95 -~~v~vS~~EIy~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~l~~~~v~s~~e~~~ll 172 (279)
+.|++||+|||||+|+|||+|.. .....+.+++ +..+++++.||+++.|.|++|++.+|
T Consensus 508 ~~~v~~s~~Eiyne~i~DLl~~~~-------------------~~~~~~~~~~~~~~g~~~v~~l~~~~v~~~~~~~~~~ 568 (715)
T 4h1g_A 508 SYTVRGKFIEIYNEAIVDLLNPKI-------------------DPNTKYEIKHDDIAGKTTVTNVSTIDIKSPEQAITIL 568 (715)
T ss_dssp EEEEEEEEEEEETTEEEESSSCCC-------------------CTTCCCCEEEETTTTEEEETTCCCEECSCHHHHHHHH
T ss_pred eEEEEEEEEEEECCEEEECCCCCC-------------------CCCCcceeEEecCCCCEEEeCCEEEEcCCHHHHHHHH
Confidence 78999999999999999998542 1223344444 34556999999999999999999999
Q ss_pred EecccceeeEEEeecccccCceeeeeeehh---------hhhhhhhccccCccceecccchhhhhhhhcccccccchhhh
Q psy7226 173 VTGNENKVTAVTKMNAQSSRSHTICTIYLG---------AMAKLHLVDLAGSEQLFSLSDNYLLRNEARKINLSLHYLEQ 243 (279)
Q Consensus 173 ~~g~~~R~~~~t~~n~~SSRSH~i~~i~v~---------~~s~l~~VDLAGsEr~~~~~~~g~r~~E~~~IN~SL~aL~~ 243 (279)
..|.++|++++|.+|..|||||+||+|+|. ..|+|+|||||||||..++++.|.|++|+..||+||++|++
T Consensus 569 ~~g~~~r~~~~t~~n~~ssRSH~i~~i~~~~~~~~~~~~~~~~l~lvDLAGsEr~~~~~~~g~~~~E~~~IN~sL~~L~~ 648 (715)
T 4h1g_A 569 NQANKKRSTAATKSNDHSSRSHSIFIIDLQGYNSLTKESSYGTLNLIDLAGSERLNNSRAEGDRLKETQAINKSLSCLGD 648 (715)
T ss_dssp HHHHCC----------CGGGSEEEEEEEEEEEETTTCCEEEEEEEEEECCCCCC---------CHHHHHHHHHHHHHHHH
T ss_pred HHHHhccCcccccccCccccccEEEEEEEEEEecCCCCEeEEEEEEEeCCCcccccccCChhHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999996 46899999999999999999999999999999999999999
Q ss_pred hHHHhcCch
Q psy7226 244 EEEEEKGKE 252 (279)
Q Consensus 244 vi~aL~~~~ 252 (279)
||+||+.++
T Consensus 649 vi~al~~~~ 657 (715)
T 4h1g_A 649 VIHSLNLKD 657 (715)
T ss_dssp HHHHHHHCS
T ss_pred HHHHHhhcC
Confidence 999997543
No 29
>2o0a_A S.cerevisiae chromosome XVI reading frame ORF YPL253C; VIK1, motor homology domain, kinesin, motor domain, microtubule-binding; 1.60A {Saccharomyces cerevisiae}
Probab=99.85 E-value=8.8e-24 Score=185.48 Aligned_cols=120 Identities=13% Similarity=0.118 Sum_probs=103.3
Q ss_pred ceeEeeecccCCCCCCc--ceehhhhHHhHHhhhc-chhhhhhhhcccCCCceEeehHHHHHHHHHHHHHc-----Cccc
Q psy7226 25 HQVFIFDNIFGPNDSNE--TIFTEVLVPLINHMFN-GINATLLAYGQTGGGKTYTVSAMIMKTLQHVMQRC-----NKDD 96 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~--~vf~~~~~plv~~~l~-G~n~~i~aYG~tgSGKTyTm~Gii~r~l~~lf~~~-----~~~~ 96 (279)
.+.|.||+||++.+.|+ +||+++ .++|+.+++ |||+||||||||||||| ||++..+|... ..+.
T Consensus 56 ~k~f~FDRVf~p~s~Qe~~~vf~E~-~~~i~scLd~GyNvcIfSyGQTGsGKT-------~ral~q~f~~~~~~~~~~Y~ 127 (298)
T 2o0a_A 56 EHVYKFNRVIPHLKVSEDKFFTQEY-SVYHDMCLNQKKNFNLISLSTTPHGSL-------RESLIKFLAEKDTIYQKQYV 127 (298)
T ss_dssp CCEEECSEEEETTTSCHHHHHHHTT-HHHHHHHHHTTCCEEEEEECSSCCHHH-------HHHHHHHHHSTTSHHHHHEE
T ss_pred CceEEeeeEECccccccHHHHHHHH-HHHHHHHHhCCCceEEEEECCCCCCcc-------HHHHHHHHHHhhhhcccceE
Confidence 47899999999999999 999995 999999999 99999999999999999 99999999988 3489
Q ss_pred hhhhHHHHh-hhhhhhhcCCCeeeEEeceeeeccCCCccccCCCCCCCCCCCCCCCcccccchhhhccc-cccceeEE
Q psy7226 97 VYMSYLQLY-SEKCYDLLNGNKEVTLKNWIFNIPQSDQRVQGPPDPQTGPASPGNGRSAASLTVKKLDS-LNSAVQLI 172 (279)
Q Consensus 97 v~vS~~EIy-~E~v~DLL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~v~s-~~e~~~ll 172 (279)
++++|+||| ||.++|||.+.+ .. ....++.+..+...+.+++.++|.+ ++|+..++
T Consensus 128 ~tlq~veLy~Ne~~~DLL~~~~-------------------~~-~k~eIk~~~~g~~iv~~s~~i~V~~~~edv~~~~ 185 (298)
T 2o0a_A 128 ITLQFVFLSDDEFSQDMLLDYS-------------------HN-DKDSIKLKFEKHSISLDSKLVIIENGLEDLPLNF 185 (298)
T ss_dssp EEEEEEEEECC-CEEETTSCCC--------------------------CEEEECSSCEEEESCCEEESSGGGGSCTTT
T ss_pred EEEEEEEEecCCchHHhcCCCC-------------------CC-CcceEEecCCCCEEecccEEEEccccHHHHHHHh
Confidence 999999999 999999997332 11 2456666778889999999999999 89888777
No 30
>2kin_B Kinesin; motor protein, cytoskeleton; HET: ADP; 2.00A {Rattus norvegicus} SCOP: c.37.1.9
Probab=96.07 E-value=0.0011 Score=49.57 Aligned_cols=22 Identities=27% Similarity=0.149 Sum_probs=19.5
Q ss_pred hcccccccchhhhhHHHhcCch
Q psy7226 231 ARKINLSLHYLEQEEEEEKGKE 252 (279)
Q Consensus 231 ~~~IN~SL~aL~~vi~aL~~~~ 252 (279)
+..||+||++||+||.||++++
T Consensus 1 a~~IN~SL~~Lg~vI~aL~~~~ 22 (100)
T 2kin_B 1 AKNINKSLSALGNVISALAEGT 22 (100)
T ss_dssp CCBSSHHHHHHHHHHHHHHHTC
T ss_pred CCcchHHHHHHHHHHHHHHhcC
Confidence 4689999999999999998763
No 31
>3ec2_A DNA replication protein DNAC; helicase loader, replication initiation factor, ATP-binding, nucleotide-binding; HET: DNA ADP; 2.70A {Aquifex aeolicus} PDB: 3ecc_A*
Probab=95.04 E-value=0.0015 Score=52.95 Aligned_cols=53 Identities=19% Similarity=0.129 Sum_probs=35.1
Q ss_pred eEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.++||.....+..|.++++.+ ..++.++--...-.++-||++|+|||+.+..+
T Consensus 6 ~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~g~~~~l~G~~G~GKTtL~~~i 58 (180)
T 3ec2_A 6 NANLDTYHPKNVSQNRALLTI-RVFVHNFNPEEGKGLTFVGSPGVGKTHLAVAT 58 (180)
T ss_dssp TCCSSSCCCCSHHHHHHHHHH-HHHHHSCCGGGCCEEEECCSSSSSHHHHHHHH
T ss_pred hCccccccCCCHHHHHHHHHH-HHHHHhccccCCCEEEEECCCCCCHHHHHHHH
Confidence 357787665555666777554 66665544333445677999999999876544
No 32
>2w58_A DNAI, primosome component (helicase loader); ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.50A {Geobacillus kaustophilus HTA426}
Probab=92.73 E-value=0.0077 Score=49.50 Aligned_cols=54 Identities=19% Similarity=0.160 Sum_probs=30.6
Q ss_pred eEeeecccCCCCCCcceehhhhHHhHHhhhcch-hhhhhhhcccCCCceEeehHHH
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLINHMFNGI-NATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~-n~~i~aYG~tgSGKTyTm~Gii 81 (279)
.+.||.+...+..+.++++.+ ..++...-.+. +..++-||++|+|||+.+..+.
T Consensus 21 ~~~f~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~l~G~~GtGKT~la~~i~ 75 (202)
T 2w58_A 21 RASLSDVDLNDDGRIKAIRFA-ERFVAEYEPGKKMKGLYLHGSFGVGKTYLLAAIA 75 (202)
T ss_dssp CCCTTSSCCSSHHHHHHHHHH-HHHHHHCCSSCCCCEEEEECSTTSSHHHHHHHHH
T ss_pred cCCHhhccCCChhHHHHHHHH-HHHHHHhhhccCCCeEEEECCCCCCHHHHHHHHH
Confidence 356776554443444444432 33333322221 1568889999999998765443
No 33
>2qgz_A Helicase loader, putative primosome component; structural genomics, PSI-2, protein structure initiative; 2.40A {Streptococcus pyogenes serotype M3}
Probab=92.07 E-value=0.013 Score=52.15 Aligned_cols=26 Identities=35% Similarity=0.538 Sum_probs=20.0
Q ss_pred hhhhhhhcccCCCceEeehHHHHHHH
Q psy7226 60 NATLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
...|+-||++|+||||.+..|...+.
T Consensus 152 ~~~lll~G~~GtGKT~La~aia~~~~ 177 (308)
T 2qgz_A 152 QKGLYLYGDMGIGKSYLLAAMAHELS 177 (308)
T ss_dssp CCEEEEECSTTSSHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHH
Confidence 45678899999999998776655443
No 34
>3kin_B Kinesin heavy chain; motor protein, cytoskeleton; HET: ADP; 3.10A {Rattus norvegicus} SCOP: c.37.1.9
Probab=90.57 E-value=0.05 Score=41.55 Aligned_cols=19 Identities=21% Similarity=0.020 Sum_probs=17.1
Q ss_pred ccccchhhhhHHHhcCchh
Q psy7226 235 NLSLHYLEQEEEEEKGKEE 253 (279)
Q Consensus 235 N~SL~aL~~vi~aL~~~~~ 253 (279)
|+||++||+||.||++++.
T Consensus 1 N~SL~~Lg~vi~aL~~~~~ 19 (117)
T 3kin_B 1 NKSLSALGNVISALAEGTK 19 (117)
T ss_dssp CCHHHHHHHHHHHHHHSCC
T ss_pred CCCHHHHHHHHHHHHhCCC
Confidence 8999999999999998753
No 35
>1jbk_A CLPB protein; beta barrel, chaperone; 1.80A {Escherichia coli} SCOP: c.37.1.20
Probab=89.61 E-value=0.092 Score=41.53 Aligned_cols=36 Identities=19% Similarity=0.217 Sum_probs=25.2
Q ss_pred hhHHhHHhhhcchhhhhhhhcccCCCceEeehHHHH
Q psy7226 47 VLVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 47 ~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
.+..++..+..+....++-||++|+|||+.+..+..
T Consensus 30 ~~~~l~~~l~~~~~~~~ll~G~~G~GKT~l~~~~~~ 65 (195)
T 1jbk_A 30 EIRRTIQVLQRRTKNNPVLIGEPGVGKTAIVEGLAQ 65 (195)
T ss_dssp HHHHHHHHHTSSSSCEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEECCCCCCHHHHHHHHHH
Confidence 345555555556566788999999999987654433
No 36
>3t15_A Ribulose bisphosphate carboxylase/oxygenase activ chloroplastic; photosynthesis, rubisco activase, AAA+ protein; 2.95A {Nicotiana tabacum} PDB: 3zw6_A
Probab=88.98 E-value=0.077 Score=46.60 Aligned_cols=17 Identities=29% Similarity=0.593 Sum_probs=13.9
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|+-||++|+|||+...
T Consensus 38 ~lLl~GppGtGKT~la~ 54 (293)
T 3t15_A 38 ILGIWGGKGQGKSFQCE 54 (293)
T ss_dssp EEEEEECTTSCHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 57789999999997643
No 37
>2p65_A Hypothetical protein PF08_0063; CLPB, malaria, structural genomics, structural genomics consortium, SGC, unknown function; 1.70A {Plasmodium falciparum}
Probab=88.11 E-value=0.098 Score=41.37 Aligned_cols=34 Identities=21% Similarity=0.253 Sum_probs=24.0
Q ss_pred hhHHhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 47 VLVPLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 47 ~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.+..++..+..+....++-||++|+|||+.+..+
T Consensus 30 ~~~~l~~~l~~~~~~~vll~G~~G~GKT~la~~~ 63 (187)
T 2p65_A 30 EIRRAIQILSRRTKNNPILLGDPGVGKTAIVEGL 63 (187)
T ss_dssp HHHHHHHHHTSSSSCEEEEESCGGGCHHHHHHHH
T ss_pred HHHHHHHHHhCCCCCceEEECCCCCCHHHHHHHH
Confidence 3455555555555667889999999999765544
No 38
>4b4t_M 26S protease regulatory subunit 6A; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.51 E-value=0.042 Score=51.40 Aligned_cols=49 Identities=22% Similarity=0.485 Sum_probs=27.2
Q ss_pred eeecccCCCCCCcceehhhhHHhHH-hhhcch----hhhhhhhcccCCCceEee
Q psy7226 29 IFDNIFGPNDSNETIFTEVLVPLIN-HMFNGI----NATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 29 ~FD~Vf~~~a~Q~~vf~~~~~plv~-~~l~G~----n~~i~aYG~tgSGKTyTm 77 (279)
+||.|-+.+..-+++.+.+..|+.. ..+.++ .-.|+-||+.|+|||...
T Consensus 179 t~~digGl~~~k~~l~e~v~~pl~~pe~f~~~g~~~prGvLLyGPPGTGKTllA 232 (434)
T 4b4t_M 179 TYSDVGGLDKQIEELVEAIVLPMKRADKFKDMGIRAPKGALMYGPPGTGKTLLA 232 (434)
T ss_dssp CGGGSCSCHHHHHHHHHHTHHHHHCSHHHHHHCCCCCCEEEEESCTTSSHHHHH
T ss_pred ChHhcCcHHHHHHHHHHHHHHHHhCHHHHHhCCCCCCCeeEEECcCCCCHHHHH
Confidence 3444444333333344444555542 334322 235889999999999664
No 39
>4b4t_K 26S protease regulatory subunit 6B homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=87.29 E-value=0.053 Score=50.64 Aligned_cols=16 Identities=50% Similarity=0.781 Sum_probs=13.7
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+-||+.|+|||...
T Consensus 208 GiLL~GPPGtGKT~la 223 (428)
T 4b4t_K 208 GVLLYGPPGTGKTMLV 223 (428)
T ss_dssp EEEEESCTTTTHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3899999999999664
No 40
>2r62_A Cell division protease FTSH homolog; ATPase domain, ATP-binding, cell CELL division, hydrolase, membrane, metal-binding; 3.30A {Helicobacter pylori} PDB: 2r65_A*
Probab=86.63 E-value=0.063 Score=45.97 Aligned_cols=53 Identities=23% Similarity=0.360 Sum_probs=29.3
Q ss_pred eEeeecccCCCCCCcceehhhhHHhH-Hhhhc----chhhhhhhhcccCCCceEeehHH
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLI-NHMFN----GINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv-~~~l~----G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.+.|+.+.+.+...+.+.+ .+..+- ...+. .....++-||++|+|||+.+..+
T Consensus 7 ~~~~~~i~G~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~~~vll~G~~GtGKT~la~~l 64 (268)
T 2r62_A 7 NVRFKDMAGNEEAKEEVVE-IVDFLKYPERYANLGAKIPKGVLLVGPPGTGKTLLAKAV 64 (268)
T ss_dssp CCCSTTSSSCTTTHHHHHH-HHHHHHCHHHHHHHSCCCCSCCCCBCSSCSSHHHHHHHH
T ss_pred CCCHHHhCCcHHHHHHHHH-HHHHHHChHHHHHCCCCCCceEEEECCCCCcHHHHHHHH
Confidence 4678888876654333332 222111 01111 11335889999999999765543
No 41
>3te6_A Regulatory protein SIR3; heterochromatin, gene silencing, SIR complex, HMR, HML, TELO AAA+ domain, structural, nucleus, gene RE; 2.80A {Saccharomyces cerevisiae}
Probab=86.36 E-value=0.07 Score=47.85 Aligned_cols=28 Identities=14% Similarity=0.050 Sum_probs=21.0
Q ss_pred hHHhhh-cchhhhhhhhcccCCCceEeeh
Q psy7226 51 LINHMF-NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 51 lv~~~l-~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
.|..++ .|...+++-||++|+|||.++.
T Consensus 35 ~L~~~i~~~~~~~lli~GpPGTGKT~~v~ 63 (318)
T 3te6_A 35 PIYDSLMSSQNKLFYITNADDSTKFQLVN 63 (318)
T ss_dssp HHHHHHHTTCCCEEEEECCCSHHHHHHHH
T ss_pred HHHHHhcCCCCCeEEEECCCCCCHHHHHH
Confidence 333333 5777789999999999997654
No 42
>3bos_A Putative DNA replication factor; P-loop containing nucleoside triphosphate hydrolases, struct genomics; HET: MSE CDP; 1.75A {Shewanella amazonensis} PDB: 3sc3_A
Probab=86.35 E-value=0.29 Score=40.33 Aligned_cols=23 Identities=17% Similarity=0.247 Sum_probs=18.0
Q ss_pred hhhhhhhhcccCCCceEeehHHH
Q psy7226 59 INATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 59 ~n~~i~aYG~tgSGKTyTm~Gii 81 (279)
....++-||++|+|||+.+..+.
T Consensus 51 ~~~~~ll~G~~G~GKT~la~~l~ 73 (242)
T 3bos_A 51 GVQAIYLWGPVKSGRTHLIHAAC 73 (242)
T ss_dssp SCSEEEEECSTTSSHHHHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHHHHH
Confidence 45678889999999998765443
No 43
>1g8p_A Magnesium-chelatase 38 kDa subunit; parallel beta sheet, P-loop, rossman fold, AAA+, photosynthesis, metal transport; 2.10A {Rhodobacter capsulatus} SCOP: c.37.1.20 PDB: 2x31_G
Probab=86.19 E-value=0.098 Score=46.37 Aligned_cols=46 Identities=26% Similarity=0.441 Sum_probs=28.7
Q ss_pred ceeEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeeh
Q psy7226 25 HQVFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 25 ~~~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
...|.|+.+++.+ .+. ..+...++.+....|+-||++|+|||+.+.
T Consensus 18 ~~~~~f~~i~G~~----~~~----~~l~~~~~~~~~~~vLl~G~~GtGKT~la~ 63 (350)
T 1g8p_A 18 RPVFPFSAIVGQE----DMK----LALLLTAVDPGIGGVLVFGDRGTGKSTAVR 63 (350)
T ss_dssp CCCCCGGGSCSCH----HHH----HHHHHHHHCGGGCCEEEECCGGGCTTHHHH
T ss_pred CCCCCchhccChH----HHH----HHHHHHhhCCCCceEEEECCCCccHHHHHH
Confidence 4567888887643 222 223333444444558999999999996543
No 44
>1l8q_A Chromosomal replication initiator protein DNAA; AAA+, helix-turn-helix, nucleotide-binding, DNA binding, REP initiation, DNA binding protein; HET: ADP; 2.70A {Aquifex aeolicus} SCOP: a.4.12.2 c.37.1.20 PDB: 3r8f_A* 2hcb_A*
Probab=85.20 E-value=0.19 Score=44.29 Aligned_cols=53 Identities=17% Similarity=0.323 Sum_probs=30.0
Q ss_pred eEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeehHHHH
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
.|+||.+.. ...+...+.. +..++..-- +....++-||++|+|||+.+..+..
T Consensus 7 ~~~f~~fv~-g~~~~~a~~~-~~~~~~~~~-~~~~~lll~G~~GtGKT~la~~i~~ 59 (324)
T 1l8q_A 7 KYTLENFIV-GEGNRLAYEV-VKEALENLG-SLYNPIFIYGSVGTGKTHLLQAAGN 59 (324)
T ss_dssp TCCSSSCCC-CTTTHHHHHH-HHHHHHTTT-TSCSSEEEECSSSSSHHHHHHHHHH
T ss_pred CCCcccCCC-CCcHHHHHHH-HHHHHhCcC-CCCCeEEEECCCCCcHHHHHHHHHH
Confidence 477887653 2233333333 233332211 1234688899999999987665443
No 45
>4b4t_J 26S protease regulatory subunit 8 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=85.13 E-value=0.083 Score=48.93 Aligned_cols=16 Identities=38% Similarity=0.681 Sum_probs=13.8
Q ss_pred hhhhhhcccCCCceEe
Q psy7226 61 ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyT 76 (279)
-.|+-||+.|+|||..
T Consensus 183 rGvLL~GPPGTGKTll 198 (405)
T 4b4t_J 183 KGVILYGPPGTGKTLL 198 (405)
T ss_dssp CCEEEESCSSSSHHHH
T ss_pred CceEEeCCCCCCHHHH
Confidence 4589999999999965
No 46
>2v1u_A Cell division control protein 6 homolog; DNA replication, nucleotide-binding, replication, archaea; HET: ADP; 3.10A {Aeropyrum pernix}
Probab=85.09 E-value=0.05 Score=48.66 Aligned_cols=23 Identities=35% Similarity=0.445 Sum_probs=17.8
Q ss_pred chhhhhhhhcccCCCceEeehHH
Q psy7226 58 GINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 58 G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
+...+++-||++|+|||+.+.-+
T Consensus 42 ~~~~~vll~G~~G~GKT~l~~~~ 64 (387)
T 2v1u_A 42 EKPSNALLYGLTGTGKTAVARLV 64 (387)
T ss_dssp CCCCCEEECBCTTSSHHHHHHHH
T ss_pred CCCCcEEEECCCCCCHHHHHHHH
Confidence 44557889999999999776544
No 47
>2bjv_A PSP operon transcriptional activator; AAA, transcription activation, gene regulation, sigma54 activator, enhancer binding protein, PSPF; 1.7A {Escherichia coli} PDB: 2bjw_A 2c96_A* 2c98_A* 2c99_A* 2c9c_A* 2vii_A*
Probab=84.63 E-value=0.067 Score=45.82 Aligned_cols=44 Identities=27% Similarity=0.486 Sum_probs=20.5
Q ss_pred EeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 28 FIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 28 f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
|+||.+.+. ......+ ...+..+.. .+..|+-||++|+|||+.+
T Consensus 3 ~~f~~~ig~----~~~~~~~-~~~~~~~~~-~~~~vll~G~~GtGKt~la 46 (265)
T 2bjv_A 3 EYKDNLLGE----ANSFLEV-LEQVSHLAP-LDKPVLIIGERGTGKELIA 46 (265)
T ss_dssp -------CC----CHHHHHH-HHHHHHHTT-SCSCEEEECCTTSCHHHHH
T ss_pred cccccceeC----CHHHHHH-HHHHHHHhC-CCCCEEEECCCCCcHHHHH
Confidence 678887653 3333333 222223222 3456788999999999653
No 48
>1ixz_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 2.20A {Thermus thermophilus} SCOP: c.37.1.20 PDB: 1iy0_A* 1iy1_A*
Probab=82.16 E-value=0.058 Score=45.90 Aligned_cols=16 Identities=38% Similarity=0.459 Sum_probs=14.0
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
++-||++|+|||+.+.
T Consensus 52 ~ll~G~~G~GKTtl~~ 67 (254)
T 1ixz_A 52 VLLVGPPGVGKTHLAR 67 (254)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7889999999997754
No 49
>4b4t_H 26S protease regulatory subunit 7 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=82.09 E-value=0.13 Score=48.44 Aligned_cols=48 Identities=29% Similarity=0.491 Sum_probs=26.4
Q ss_pred eeecccCCCCCCcceehhhhHHhH-Hhhhcch----hhhhhhhcccCCCceEe
Q psy7226 29 IFDNIFGPNDSNETIFTEVLVPLI-NHMFNGI----NATLLAYGQTGGGKTYT 76 (279)
Q Consensus 29 ~FD~Vf~~~a~Q~~vf~~~~~plv-~~~l~G~----n~~i~aYG~tgSGKTyT 76 (279)
+||.|-+-+..-+++.+.+..|+. ...+.++ .-.|+-||+.|+|||..
T Consensus 207 t~~DIgGl~~~k~~L~e~V~~pl~~pe~f~~~Gi~pprGILLyGPPGTGKTlL 259 (467)
T 4b4t_H 207 TYSDVGGCKDQIEKLREVVELPLLSPERFATLGIDPPKGILLYGPPGTGKTLC 259 (467)
T ss_dssp CCSSCTTCHHHHHHHHHHTHHHHHCHHHHHHHTCCCCSEEEECSCTTSSHHHH
T ss_pred CHHHhccHHHHHHHHHHHHHHHhcCHHHHHHCCCCCCCceEeeCCCCCcHHHH
Confidence 444444433333333334444444 2344433 24589999999999954
No 50
>4b4t_L 26S protease subunit RPT4; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=81.81 E-value=0.15 Score=47.70 Aligned_cols=17 Identities=41% Similarity=0.667 Sum_probs=14.2
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
-.|+-||+.|+|||...
T Consensus 216 rGvLL~GPPGtGKTllA 232 (437)
T 4b4t_L 216 KGVLLYGPPGTGKTLLA 232 (437)
T ss_dssp CEEEEESCTTSSHHHHH
T ss_pred CeEEEECCCCCcHHHHH
Confidence 45899999999999653
No 51
>2chg_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATPase, ATP-binding, nucleotide-binding; HET: ANP; 2.1A {Archaeoglobus fulgidus}
Probab=81.62 E-value=0.24 Score=40.05 Aligned_cols=24 Identities=38% Similarity=0.355 Sum_probs=17.3
Q ss_pred cchhhhhhhhcccCCCceEeehHH
Q psy7226 57 NGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.+....++-||++|+|||+.+.-+
T Consensus 35 ~~~~~~~ll~G~~G~GKT~l~~~l 58 (226)
T 2chg_A 35 RKNIPHLLFSGPPGTGKTATAIAL 58 (226)
T ss_dssp TTCCCCEEEECSTTSSHHHHHHHH
T ss_pred CCCCCeEEEECCCCCCHHHHHHHH
Confidence 343334899999999999765444
No 52
>3cf0_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48, ATP-binding, lipid-binding, nucle binding, nucleus, phosphoprotein, transport; HET: ADP; 3.00A {Mus musculus}
Probab=81.55 E-value=0.067 Score=47.07 Aligned_cols=52 Identities=25% Similarity=0.344 Sum_probs=28.2
Q ss_pred eEeeecccCCCCCCcceehhhhHHhHH-hhhc----chhhhhhhhcccCCCceEeeh
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLIN-HMFN----GINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv~-~~l~----G~n~~i~aYG~tgSGKTyTm~ 78 (279)
...||.|.+.+..-+.+.+.+..|+.. ..+. .....|+-||++|+|||+.+.
T Consensus 11 ~~~~~di~G~~~~~~~l~~~v~~~~~~~~~~~~~~~~~~~~vLL~Gp~GtGKT~la~ 67 (301)
T 3cf0_A 11 QVTWEDIGGLEDVKRELQELVQYPVEHPDKFLKFGMTPSKGVLFYGPPGCGKTLLAK 67 (301)
T ss_dssp CCCGGGSCSCHHHHHHHHHHHHHHHHCHHHHHHHCCCCCSEEEEECSSSSSHHHHHH
T ss_pred CCCHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCceEEEECCCCcCHHHHHH
Confidence 356777766543333333333333221 1121 223458899999999996643
No 53
>1xwi_A SKD1 protein; VPS4B, AAA ATPase, protein transport; 2.80A {Homo sapiens}
Probab=81.34 E-value=0.088 Score=46.93 Aligned_cols=52 Identities=25% Similarity=0.547 Sum_probs=29.2
Q ss_pred eEeeecccCCCCCCcceehhhhHHhH-Hhhhcch---hhhhhhhcccCCCceEeeh
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLI-NHMFNGI---NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv-~~~l~G~---n~~i~aYG~tgSGKTyTm~ 78 (279)
...||.|.+.+..-+.+.+.+..|+- ..++.|. .-.|+-||++|+|||+.+.
T Consensus 8 ~~~~~di~G~~~~k~~l~~~v~~p~~~~~~~~~~~~~~~~iLL~GppGtGKT~la~ 63 (322)
T 1xwi_A 8 NVKWSDVAGLEGAKEALKEAVILPIKFPHLFTGKRTPWRGILLFGPPGTGKSYLAK 63 (322)
T ss_dssp CCCGGGSCSCHHHHHHHHHHHHHHHHCGGGSCTTCCCCSEEEEESSSSSCHHHHHH
T ss_pred CCCHHHhcCHHHHHHHHHHHHHHHHhCHHHHhCCCCCCceEEEECCCCccHHHHHH
Confidence 34667777654333333333333333 2333332 1357889999999996644
No 54
>1fnn_A CDC6P, cell division control protein 6; ORC1, AAA protein, DNA replication initation factor, cell cycle control factor; HET: ADP; 2.00A {Pyrobaculum aerophilum} SCOP: a.4.5.11 c.37.1.20
Probab=80.73 E-value=0.15 Score=45.73 Aligned_cols=30 Identities=23% Similarity=0.298 Sum_probs=20.2
Q ss_pred HHhHHhhhcchh-h--hhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFNGIN-A--TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~G~n-~--~i~aYG~tgSGKTyTm~ 78 (279)
...+...+.|.. . +++-||++|+|||+++.
T Consensus 30 ~~~l~~~~~~~~~~~~~~li~G~~G~GKTtl~~ 62 (389)
T 1fnn_A 30 DILLGNWLRNPGHHYPRATLLGRPGTGKTVTLR 62 (389)
T ss_dssp HHHHHHHHHSTTSSCCEEEEECCTTSSHHHHHH
T ss_pred HHHHHHHHcCCCCCCCeEEEECCCCCCHHHHHH
Confidence 344444444433 3 58889999999997654
No 55
>4b3f_X DNA-binding protein smubp-2; hydrolase, helicase; 2.50A {Homo sapiens} PDB: 4b3g_A
Probab=80.71 E-value=0.38 Score=46.92 Aligned_cols=32 Identities=25% Similarity=0.377 Sum_probs=20.6
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehHHHHH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r 83 (279)
.|..++.....+ +-.|+.|||||+|+..+|..
T Consensus 197 AV~~al~~~~~~-lI~GPPGTGKT~ti~~~I~~ 228 (646)
T 4b3f_X 197 AVLFALSQKELA-IIHGPPGTGKTTTVVEIILQ 228 (646)
T ss_dssp HHHHHHHCSSEE-EEECCTTSCHHHHHHHHHHH
T ss_pred HHHHHhcCCCce-EEECCCCCCHHHHHHHHHHH
Confidence 344455433344 44599999999998755543
No 56
>3b9p_A CG5977-PA, isoform A; AAA ATPase, ATP-binding, nucleotide-binding, hydrolase; 2.70A {Drosophila melanogaster}
Probab=80.68 E-value=0.082 Score=45.96 Aligned_cols=19 Identities=37% Similarity=0.606 Sum_probs=15.3
Q ss_pred hhhhhhhcccCCCceEeeh
Q psy7226 60 NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~ 78 (279)
...++-||++|+|||+.+.
T Consensus 54 ~~~vll~Gp~GtGKT~la~ 72 (297)
T 3b9p_A 54 AKGLLLFGPPGNGKTLLAR 72 (297)
T ss_dssp CSEEEEESSSSSCHHHHHH
T ss_pred CCeEEEECcCCCCHHHHHH
Confidence 4568899999999996543
No 57
>3jvv_A Twitching mobility protein; hexameric P-loop ATPase, secretion ATPase, ATP-binding, FIMB nucleotide-binding, transport; HET: ACP CIT; 2.60A {Pseudomonas aeruginosa} PDB: 3jvu_A*
Probab=80.60 E-value=0.3 Score=44.28 Aligned_cols=29 Identities=24% Similarity=0.381 Sum_probs=20.3
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEeeh
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
+.+..++.-....++-.|+||||||++|.
T Consensus 113 ~~l~~l~~~~~g~i~I~GptGSGKTTlL~ 141 (356)
T 3jvv_A 113 EVFKRVSDVPRGLVLVTGPTGSGKSTTLA 141 (356)
T ss_dssp HHHHHHHHCSSEEEEEECSTTSCHHHHHH
T ss_pred HHHHHHHhCCCCEEEEECCCCCCHHHHHH
Confidence 44555554444467777999999998875
No 58
>1d2n_A N-ethylmaleimide-sensitive fusion protein; hexamerization domain, ATPase, transport; HET: ANP; 1.75A {Cricetulus griseus} SCOP: c.37.1.20 PDB: 1nsf_A*
Probab=80.38 E-value=0.31 Score=41.75 Aligned_cols=23 Identities=22% Similarity=0.179 Sum_probs=17.7
Q ss_pred cchhhhhhhhcccCCCceEeehH
Q psy7226 57 NGINATLLAYGQTGGGKTYTVSA 79 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~G 79 (279)
......++-||++|+|||+.+.-
T Consensus 61 ~~~~~~vLl~G~~GtGKT~la~~ 83 (272)
T 1d2n_A 61 RTPLVSVLLEGPPHSGKTALAAK 83 (272)
T ss_dssp SCSEEEEEEECSTTSSHHHHHHH
T ss_pred CCCCeEEEEECCCCCcHHHHHHH
Confidence 44456788999999999976543
No 59
>1p9r_A General secretion pathway protein E; bacterial type II secretion system cytoplasmic protein - GSPE, putative ATPase/ ATP binding protein; 2.50A {Vibrio cholerae} SCOP: c.37.1.11 PDB: 1p9w_A*
Probab=79.66 E-value=0.39 Score=44.56 Aligned_cols=31 Identities=26% Similarity=0.344 Sum_probs=22.4
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
+++..++......|+-.|+||||||++|.-|
T Consensus 157 ~~L~~l~~~~ggii~I~GpnGSGKTTlL~al 187 (418)
T 1p9r_A 157 DNFRRLIKRPHGIILVTGPTGSGKSTTLYAG 187 (418)
T ss_dssp HHHHHHHTSSSEEEEEECSTTSCHHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCCCCHHHHHHHH
Confidence 3566666545556778899999999887633
No 60
>3h4m_A Proteasome-activating nucleotidase; ATPase, PAN, ATP-binding, nucleotide-binding, HY; HET: ADP; 3.11A {Methanocaldococcus jannaschii}
Probab=79.47 E-value=0.094 Score=45.22 Aligned_cols=53 Identities=26% Similarity=0.399 Sum_probs=28.2
Q ss_pred eeEeeecccCCCCCCcceehhhhHHhHH-hhhc----chhhhhhhhcccCCCceEeeh
Q psy7226 26 QVFIFDNIFGPNDSNETIFTEVLVPLIN-HMFN----GINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 26 ~~f~FD~Vf~~~a~Q~~vf~~~~~plv~-~~l~----G~n~~i~aYG~tgSGKTyTm~ 78 (279)
..+.||.+.+.+..-+.+.+.+..++.. ..+. .....++-||++|+|||+.+.
T Consensus 12 ~~~~~~~i~G~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ll~G~~GtGKT~la~ 69 (285)
T 3h4m_A 12 PNVRYEDIGGLEKQMQEIREVVELPLKHPELFEKVGIEPPKGILLYGPPGTGKTLLAK 69 (285)
T ss_dssp CCCCGGGSCSCHHHHHHHHHHTHHHHHCHHHHHHHCCCCCSEEEEESSSSSSHHHHHH
T ss_pred CCCCHHHhcCHHHHHHHHHHHHHHHhhCHHHHHhcCCCCCCeEEEECCCCCcHHHHHH
Confidence 3567777776543323332222222111 1111 233458889999999997654
No 61
>2qby_A CDC6 homolog 1, cell division control protein 6 homolog 1; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=79.08 E-value=0.16 Score=45.18 Aligned_cols=20 Identities=40% Similarity=0.594 Sum_probs=16.0
Q ss_pred hhhhhhhhcccCCCceEeeh
Q psy7226 59 INATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 59 ~n~~i~aYG~tgSGKTyTm~ 78 (279)
....++-||++|+|||+.+.
T Consensus 44 ~~~~vli~G~~G~GKTtl~~ 63 (386)
T 2qby_A 44 KPNNIFIYGLTGTGKTAVVK 63 (386)
T ss_dssp CCCCEEEEECTTSSHHHHHH
T ss_pred CCCeEEEECCCCCCHHHHHH
Confidence 34578889999999997654
No 62
>1qde_A EIF4A, translation initiation factor 4A; DEAD box protein family, gene regulation; 2.00A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 1qva_A
Probab=79.01 E-value=0.49 Score=38.95 Aligned_cols=25 Identities=40% Similarity=0.496 Sum_probs=18.7
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 43 ~~i~~~~~~~~--~lv~~pTGsGKT~~ 67 (224)
T 1qde_A 43 RAIMPIIEGHD--VLAQAQSGTGKTGT 67 (224)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCCcHHHH
Confidence 34556677776 56778999999965
No 63
>3b6e_A Interferon-induced helicase C domain-containing P; DECH, DEXD/H RNA-binding helicase, innate immunity, IFIH1, S genomics; 1.60A {Homo sapiens}
Probab=78.96 E-value=0.3 Score=39.67 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=20.9
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
...+..+++|.+ ++..++||+|||.+..-+
T Consensus 39 ~~~i~~~~~~~~--~li~~~tGsGKT~~~~~~ 68 (216)
T 3b6e_A 39 MEVAQPALEGKN--IIICLPTGSGKTRVAVYI 68 (216)
T ss_dssp HHHHHHHHTTCC--EEEECSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCC--EEEEcCCCCCHHHHHHHH
Confidence 344556667765 466799999999875533
No 64
>3ly5_A ATP-dependent RNA helicase DDX18; alpha-beta, structural genomics, structural genomics consort ATP-binding, hydrolase, nucleotide-binding, RNA-B; 2.80A {Homo sapiens}
Probab=78.82 E-value=0.5 Score=40.43 Aligned_cols=26 Identities=38% Similarity=0.554 Sum_probs=20.0
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..++..++.|.+ ++..++||||||.+
T Consensus 82 ~~~i~~~~~~~~--~lv~a~TGsGKT~~ 107 (262)
T 3ly5_A 82 HKSIRPLLEGRD--LLAAAKTGSGKTLA 107 (262)
T ss_dssp HHHHHHHHHTCC--CEECCCTTSCHHHH
T ss_pred HHHHHHHhCCCc--EEEEccCCCCchHH
Confidence 455666778876 57779999999965
No 65
>2kjq_A DNAA-related protein; solution structure, NESG, structural genomics, PSI-2, protei structure initiative; NMR {Neisseria meningitidis serogroup B}
Probab=78.50 E-value=0.38 Score=37.72 Aligned_cols=20 Identities=25% Similarity=0.574 Sum_probs=15.5
Q ss_pred hhhhhcccCCCceEeehHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii 81 (279)
.++-+|++|+|||+.+..+.
T Consensus 38 ~~~l~G~~G~GKTtL~~~i~ 57 (149)
T 2kjq_A 38 FIYVWGEEGAGKSHLLQAWV 57 (149)
T ss_dssp EEEEESSSTTTTCHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHH
Confidence 45668999999998766443
No 66
>1sxj_D Activator 1 41 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=78.49 E-value=0.36 Score=42.57 Aligned_cols=32 Identities=31% Similarity=0.408 Sum_probs=20.8
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
..+...+..|....++-||++|+|||+++.-+
T Consensus 47 ~~l~~~l~~~~~~~~ll~G~~G~GKT~la~~l 78 (353)
T 1sxj_D 47 TVLKKTLKSANLPHMLFYGPPGTGKTSTILAL 78 (353)
T ss_dssp HHHHHHTTCTTCCCEEEECSTTSSHHHHHHHH
T ss_pred HHHHHHHhcCCCCEEEEECCCCCCHHHHHHHH
Confidence 33444444553334888999999999775533
No 67
>1tue_A Replication protein E1; helicase, replication, E1E2 complex, AAA+ protein; 2.10A {Human papillomavirus type 18} SCOP: c.37.1.20
Probab=78.25 E-value=0.28 Score=41.30 Aligned_cols=21 Identities=29% Similarity=0.436 Sum_probs=17.1
Q ss_pred hhhhhhcccCCCceEeehHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii 81 (279)
-+++-||+.|+|||+....|+
T Consensus 59 n~ili~GPPGtGKTt~a~ala 79 (212)
T 1tue_A 59 NCLVFCGPANTGKSYFGMSFI 79 (212)
T ss_dssp SEEEEESCGGGCHHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHHH
Confidence 468999999999998765553
No 68
>2z4s_A Chromosomal replication initiator protein DNAA; AAA+ ATPase, domain III (ATPase domain), ATP-binding, cytoplasm, DNA replication; HET: ADP; 3.00A {Thermotoga maritima} PDB: 2z4r_A*
Probab=77.98 E-value=0.46 Score=44.18 Aligned_cols=21 Identities=33% Similarity=0.485 Sum_probs=16.8
Q ss_pred hhhhhhcccCCCceEeehHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii 81 (279)
-.++-||++|+|||+.+..|.
T Consensus 131 ~~lll~Gp~G~GKTtLa~aia 151 (440)
T 2z4s_A 131 NPLFIYGGVGLGKTHLLQSIG 151 (440)
T ss_dssp CCEEEECSSSSSHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHH
Confidence 467889999999998766443
No 69
>3h1t_A Type I site-specific restriction-modification system, R (restriction) subunit; hydrolase, restriction enzyme HSDR, ATP-binding; 2.30A {Vibrio vulnificus}
Probab=77.93 E-value=0.61 Score=44.69 Aligned_cols=33 Identities=24% Similarity=0.350 Sum_probs=20.5
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehHHHHHH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
++..+..|...++++ ++||||||.++..++.+.
T Consensus 190 ~~~~~~~~~~~~ll~-~~TGsGKT~~~~~~~~~l 222 (590)
T 3h1t_A 190 AVQSVLQGKKRSLIT-MATGTGKTVVAFQISWKL 222 (590)
T ss_dssp HHHHHHTTCSEEEEE-ECTTSCHHHHHHHHHHHH
T ss_pred HHHHHhcCCCceEEE-ecCCCChHHHHHHHHHHH
Confidence 333344465544444 999999999866554443
No 70
>2gxq_A Heat resistant RNA dependent ATPase; RNA helicase, atomic resolution, AMP complex, ribosome biogenesis, thermophilic, hydrolase; HET: AMP; 1.20A {Thermus thermophilus HB27} PDB: 2gxs_A* 2gxu_A 3mwj_A 3mwk_A* 3mwl_A* 3nbf_A* 3nej_A
Probab=77.52 E-value=0.57 Score=37.89 Aligned_cols=25 Identities=28% Similarity=0.488 Sum_probs=18.3
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 30 ~~i~~~~~~~~--~li~~~TGsGKT~~ 54 (207)
T 2gxq_A 30 AALPLALEGKD--LIGQARTGTGKTLA 54 (207)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHcCCCC--EEEECCCCChHHHH
Confidence 34555677766 46668999999975
No 71
>1vec_A ATP-dependent RNA helicase P54; DEAD-box protein, RNA binding protein; HET: TLA; 2.01A {Homo sapiens} SCOP: c.37.1.19
Probab=77.35 E-value=0.61 Score=37.75 Aligned_cols=26 Identities=27% Similarity=0.364 Sum_probs=18.5
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
...+..+++|.+ ++..++||||||.+
T Consensus 31 ~~~i~~~~~~~~--~lv~apTGsGKT~~ 56 (206)
T 1vec_A 31 EESIPIALSGRD--ILARAKNGTGKSGA 56 (206)
T ss_dssp HHHHHHHHTTCC--EEEECCSSSTTHHH
T ss_pred HHHHHHHccCCC--EEEECCCCCchHHH
Confidence 344556677766 46678999999954
No 72
>3eie_A Vacuolar protein sorting-associated protein 4; AAA ATPase, ATP-binding cassette, ATP-binding, endosome, MEM nucleotide-binding; 2.70A {Saccharomyces cerevisiae} PDB: 3eih_A* 2rko_A 3mhv_C
Probab=77.33 E-value=0.12 Score=45.82 Aligned_cols=18 Identities=39% Similarity=0.804 Sum_probs=14.8
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..|+-||++|+|||+.+.
T Consensus 52 ~~vLl~GppGtGKT~la~ 69 (322)
T 3eie_A 52 SGILLYGPPGTGKSYLAK 69 (322)
T ss_dssp CEEEEECSSSSCHHHHHH
T ss_pred CeEEEECCCCCcHHHHHH
Confidence 358899999999997654
No 73
>2jlq_A Serine protease subunit NS3; ribonucleoprotein, nucleotide-binding, viral nucleoprotein, endoplasmic reticulum, helicase, hydrolase; 1.67A {Dengue virus 4} PDB: 2jly_A* 2jls_A* 2jlu_A 2jlv_A* 2jlw_A 2jlx_A* 2jlz_A* 2jlr_A* 2bmf_A 2bhr_A
Probab=77.27 E-value=0.41 Score=44.51 Aligned_cols=30 Identities=20% Similarity=0.331 Sum_probs=20.4
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe-ehHHH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT-VSAMI 81 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT-m~Gii 81 (279)
++..+++|.+.. +..++||||||.. +..++
T Consensus 11 ~i~~~l~~~~~~-lv~a~TGsGKT~~~~~~~l 41 (451)
T 2jlq_A 11 VDEDIFRKKRLT-IMDLHPGAGKTKRILPSIV 41 (451)
T ss_dssp CCGGGGSTTCEE-EECCCTTSSCCTTHHHHHH
T ss_pred HHHHHHhcCCeE-EEECCCCCCHhhHHHHHHH
Confidence 345667787753 5569999999986 33433
No 74
>3bor_A Human initiation factor 4A-II; translation initiation, DEAD BOX, structural genomics, helic binding, HOST-virus interaction, hydrolase; 1.85A {Homo sapiens} PDB: 2g9n_A*
Probab=76.57 E-value=0.43 Score=40.00 Aligned_cols=25 Identities=36% Similarity=0.469 Sum_probs=18.6
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 59 ~ai~~i~~~~~--~li~apTGsGKT~~ 83 (237)
T 3bor_A 59 RAIIPCIKGYD--VIAQAQSGTGKTAT 83 (237)
T ss_dssp HHHHHHHTTCC--EEECCCSSHHHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCcHHHH
Confidence 44555677876 56789999999965
No 75
>3d8b_A Fidgetin-like protein 1; AAA+, ATPase, ADP, SGC, structural genomics consortium, ATP- hydrolase, magnesium, metal-binding, nucleotide-binding; HET: ADP; 2.00A {Homo sapiens}
Probab=76.52 E-value=0.12 Score=46.57 Aligned_cols=20 Identities=30% Similarity=0.438 Sum_probs=15.9
Q ss_pred hhhhhhhhcccCCCceEeeh
Q psy7226 59 INATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 59 ~n~~i~aYG~tgSGKTyTm~ 78 (279)
....|+-||++|+|||+.+.
T Consensus 116 ~~~~vLl~GppGtGKT~la~ 135 (357)
T 3d8b_A 116 PPKGILLFGPPGTGKTLIGK 135 (357)
T ss_dssp CCSEEEEESSTTSSHHHHHH
T ss_pred CCceEEEECCCCCCHHHHHH
Confidence 34568899999999997654
No 76
>3dkp_A Probable ATP-dependent RNA helicase DDX52; DEAD, ADP, structural genomics, structural GEN consortium, SGC, rRNA, ATP-binding, hydrolase; HET: ADP; 2.10A {Homo sapiens}
Probab=76.01 E-value=0.66 Score=38.82 Aligned_cols=26 Identities=42% Similarity=0.579 Sum_probs=19.4
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
...+..+++|.+ ++..++||||||.+
T Consensus 57 ~~~i~~~~~~~~--~l~~a~TGsGKT~~ 82 (245)
T 3dkp_A 57 MQAIPVMLHGRE--LLASAPTGSGKTLA 82 (245)
T ss_dssp HHHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHHhCCCC--EEEECCCCCcHHHH
Confidence 344556677877 56778999999965
No 77
>2x8a_A Nuclear valosin-containing protein-like; nuclear protein; 2.60A {Homo sapiens}
Probab=75.83 E-value=0.099 Score=45.53 Aligned_cols=51 Identities=25% Similarity=0.399 Sum_probs=25.1
Q ss_pred EeeecccCCCCCCcceehhhhHHhHH-hhhcchhh----hhhhhcccCCCceEeeh
Q psy7226 28 FIFDNIFGPNDSNETIFTEVLVPLIN-HMFNGINA----TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 28 f~FD~Vf~~~a~Q~~vf~~~~~plv~-~~l~G~n~----~i~aYG~tgSGKTyTm~ 78 (279)
..||.|-+.+.--+++.+.++.|+-. .++.+.+. .++-||++|+|||+.+-
T Consensus 7 ~~~~di~g~~~~~~~l~~~i~~~~~~~~~l~~~~l~~~~GvlL~Gp~GtGKTtLak 62 (274)
T 2x8a_A 7 VTWADIGALEDIREELTMAILAPVRNPDQFKALGLVTPAGVLLAGPPGCGKTLLAK 62 (274)
T ss_dssp -----CCHHHHHHHHHHHHHTHHHHSHHHHHHTTCCCCSEEEEESSTTSCHHHHHH
T ss_pred CCHHHhCCHHHHHHHHHHHHHHHhhCHHHHHHcCCCCCCeEEEECCCCCcHHHHHH
Confidence 45555554443333444444444432 23333321 17889999999996543
No 78
>2eyu_A Twitching motility protein PILT; pilus retraction motor, C-terminal domain PILT, protein transport; 1.87A {Aquifex aeolicus}
Probab=75.41 E-value=0.53 Score=40.61 Aligned_cols=17 Identities=41% Similarity=0.700 Sum_probs=13.7
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.+.-.|++|||||+++.
T Consensus 27 ~v~i~Gp~GsGKSTll~ 43 (261)
T 2eyu_A 27 LILVTGPTGSGKSTTIA 43 (261)
T ss_dssp EEEEECSTTCSHHHHHH
T ss_pred EEEEECCCCccHHHHHH
Confidence 45667999999997765
No 79
>3uk6_A RUVB-like 2; hexameric AAA+ ATP-ASE, DNA unwinding, hydrolase; HET: ADP; 2.95A {Homo sapiens} PDB: 2xsz_D*
Probab=75.32 E-value=0.46 Score=42.35 Aligned_cols=30 Identities=30% Similarity=0.334 Sum_probs=21.1
Q ss_pred HHhHHhhhcchhh--hhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFNGINA--TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~G~n~--~i~aYG~tgSGKTyTm~ 78 (279)
..++..+-.|... .++-||++|+|||+.+.
T Consensus 57 ~~l~~~~~~~~~~~~~vLl~GppGtGKT~la~ 88 (368)
T 3uk6_A 57 GVVLEMIREGKIAGRAVLIAGQPGTGKTAIAM 88 (368)
T ss_dssp HHHHHHHHTTCCTTCEEEEEESTTSSHHHHHH
T ss_pred HHHHHHHHcCCCCCCEEEEECCCCCCHHHHHH
Confidence 3445555556554 78899999999996644
No 80
>2qp9_X Vacuolar protein sorting-associated protein 4; ATPase domain, beta domain, C-terminal helix, ATP-binding, E nucleotide-binding; 2.90A {Saccharomyces cerevisiae} PDB: 2qpa_A*
Probab=74.48 E-value=0.19 Score=45.29 Aligned_cols=17 Identities=41% Similarity=0.829 Sum_probs=14.1
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|+-||++|+|||+.+.
T Consensus 86 ~iLL~GppGtGKT~la~ 102 (355)
T 2qp9_X 86 GILLYGPPGTGKSYLAK 102 (355)
T ss_dssp CEEEECSTTSCHHHHHH
T ss_pred eEEEECCCCCcHHHHHH
Confidence 57889999999997643
No 81
>2qby_B CDC6 homolog 3, cell division control protein 6 homolog 3; winged-helix domain, helix-turn-helix, AAA+ ATPase domain, protein-DNA complex; HET: DNA SPD ADP; 3.35A {Sulfolobus solfataricus}
Probab=74.07 E-value=0.23 Score=44.46 Aligned_cols=32 Identities=25% Similarity=0.344 Sum_probs=21.0
Q ss_pred HHhHHhhhcc-hhhhhhhhcccCCCceEeehHH
Q psy7226 49 VPLINHMFNG-INATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 49 ~plv~~~l~G-~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
...+..++.| ...+++-||++|+|||+.+.-+
T Consensus 33 ~~~l~~~~~~~~~~~vll~G~~G~GKT~la~~l 65 (384)
T 2qby_B 33 AIAIRYFVKNEVKFSNLFLGLTGTGKTFVSKYI 65 (384)
T ss_dssp HHHHHHHHTTCCCCEEEEEECTTSSHHHHHHHH
T ss_pred HHHHHHHHcCCCCCcEEEECCCCCCHHHHHHHH
Confidence 3344444433 3447899999999999765433
No 82
>2pl3_A Probable ATP-dependent RNA helicase DDX10; DEAD, structural genomics, structural genomic consortium, SGC, hydrolase; HET: ADP; 2.15A {Homo sapiens}
Probab=73.79 E-value=0.82 Score=38.00 Aligned_cols=25 Identities=32% Similarity=0.510 Sum_probs=18.2
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 54 ~~i~~~~~~~~--~li~a~TGsGKT~~ 78 (236)
T 2pl3_A 54 QTIGLALQGKD--VLGAAKTGSGKTLA 78 (236)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHhCCCC--EEEEeCCCCcHHHH
Confidence 44556677876 45668999999975
No 83
>1u0j_A DNA replication protein; AAA+ protein, P-loop atpases, helicase; HET: DNA ADP; 2.10A {Adeno-associated virus - 2} SCOP: c.37.1.20 PDB: 1s9h_A
Probab=73.43 E-value=0.65 Score=40.46 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=21.8
Q ss_pred HhHHhhhcch---hhhhhhhcccCCCceEeeh
Q psy7226 50 PLINHMFNGI---NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 50 plv~~~l~G~---n~~i~aYG~tgSGKTyTm~ 78 (279)
..+..++.|. .-||+-||+.|+|||+...
T Consensus 91 ~~l~~~l~~~~~~~n~~~l~GppgtGKt~~a~ 122 (267)
T 1u0j_A 91 SVFLGWATKKFGKRNTIWLFGPATTGKTNIAE 122 (267)
T ss_dssp HHHHHHHTTCSTTCCEEEEECSTTSSHHHHHH
T ss_pred HHHHHHHhCCCCCCcEEEEECCCCCCHHHHHH
Confidence 4456677776 3479999999999996644
No 84
>3iuy_A Probable ATP-dependent RNA helicase DDX53; REC-A-like, DEAD-BOX, structural genomics, structural genomi consortium, SGC, ATP-binding, hydrolase; HET: AMP; 2.40A {Homo sapiens}
Probab=73.34 E-value=0.83 Score=37.72 Aligned_cols=25 Identities=32% Similarity=0.498 Sum_probs=18.3
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.++ +..++||||||.+
T Consensus 49 ~~i~~~~~~~~~--l~~apTGsGKT~~ 73 (228)
T 3iuy_A 49 QAWPIILQGIDL--IVVAQTGTGKTLS 73 (228)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHH
Confidence 344556678775 6668999999966
No 85
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=72.38 E-value=0.77 Score=42.24 Aligned_cols=27 Identities=30% Similarity=0.409 Sum_probs=20.8
Q ss_pred hhhhhhhcccCCCceEeehHHHHHHHH
Q psy7226 60 NATLLAYGQTGGGKTYTVSAMIMKTLQ 86 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~Gii~r~l~ 86 (279)
+.-++..|+||||||.++..+++..+.
T Consensus 53 ~~h~~i~G~tGsGKs~~~~~li~~~~~ 79 (437)
T 1e9r_A 53 PRHLLVNGATGTGKSVLLRELAYTGLL 79 (437)
T ss_dssp GGCEEEEECTTSSHHHHHHHHHHHHHH
T ss_pred cceEEEECCCCCCHHHHHHHHHHHHHH
Confidence 455688899999999987667766543
No 86
>3vfd_A Spastin; ATPase, microtubule severing, hydrolase; 3.30A {Homo sapiens}
Probab=72.28 E-value=0.26 Score=44.84 Aligned_cols=18 Identities=39% Similarity=0.643 Sum_probs=15.1
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..|+-||++|+|||+.+.
T Consensus 149 ~~vLL~GppGtGKT~la~ 166 (389)
T 3vfd_A 149 RGLLLFGPPGNGKTMLAK 166 (389)
T ss_dssp SEEEEESSTTSCHHHHHH
T ss_pred ceEEEECCCCCCHHHHHH
Confidence 468899999999997654
No 87
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=72.16 E-value=0.98 Score=45.57 Aligned_cols=38 Identities=18% Similarity=0.289 Sum_probs=26.6
Q ss_pred hhHHhHHhhhcchhhhhhhhcccCCCceEeehHHHHHH
Q psy7226 47 VLVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 47 ~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
.+..+++.+..+....++-||++|+|||+.+.++..+.
T Consensus 178 ~i~~l~~~l~~~~~~~vlL~G~pG~GKT~la~~la~~l 215 (854)
T 1qvr_A 178 EIRRVIQILLRRTKNNPVLIGEPGVGKTAIVEGLAQRI 215 (854)
T ss_dssp HHHHHHHHHHCSSCCCCEEEECTTSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCceEEEcCCCCCHHHHHHHHHHHH
Confidence 34555554445555567889999999998877766554
No 88
>1wrb_A DJVLGB; RNA helicase, DEAD BOX, VASA, structural genomics, NPPSFA, N project on protein structural and functional analyses; 2.40A {Dugesia japonica} SCOP: c.37.1.19
Probab=72.11 E-value=0.95 Score=38.07 Aligned_cols=26 Identities=31% Similarity=0.427 Sum_probs=19.0
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
...+..+++|.+ ++..++||||||.+
T Consensus 51 ~~~i~~i~~~~~--~l~~a~TGsGKT~~ 76 (253)
T 1wrb_A 51 KNAIPAILEHRD--IMACAQTGSGKTAA 76 (253)
T ss_dssp HHHHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHHHhCCCC--EEEECCCCChHHHH
Confidence 345566778877 45667999999955
No 89
>1sxj_C Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=72.06 E-value=0.66 Score=41.15 Aligned_cols=24 Identities=42% Similarity=0.556 Sum_probs=17.1
Q ss_pred hhcchhhhhhhhcccCCCceEeeh
Q psy7226 55 MFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
+-.|.-..++-||+.|+|||+++.
T Consensus 41 i~~g~~~~~ll~Gp~G~GKTtla~ 64 (340)
T 1sxj_C 41 VDEGKLPHLLFYGPPGTGKTSTIV 64 (340)
T ss_dssp HHTTCCCCEEEECSSSSSHHHHHH
T ss_pred HhcCCCceEEEECCCCCCHHHHHH
Confidence 334533337789999999998765
No 90
>4b4t_I 26S protease regulatory subunit 4 homolog; hydrolase, AAA-atpases, protein degradation, ubiquitin-prote pathway; 7.40A {Saccharomyces cerevisiae}
Probab=71.96 E-value=0.75 Score=42.87 Aligned_cols=17 Identities=35% Similarity=0.643 Sum_probs=14.2
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
-.|+-||+.|+|||...
T Consensus 217 rGvLLyGPPGTGKTlLA 233 (437)
T 4b4t_I 217 KGVILYGAPGTGKTLLA 233 (437)
T ss_dssp SEEEEESSTTTTHHHHH
T ss_pred CCCceECCCCchHHHHH
Confidence 45899999999999653
No 91
>3syl_A Protein CBBX; photosynthesis, rubisco activase, AAA+ protein, calvin cycle chaperone; 3.00A {Rhodobacter sphaeroides} PDB: 3syk_A 3zuh_A*
Probab=71.87 E-value=0.64 Score=40.30 Aligned_cols=17 Identities=29% Similarity=0.345 Sum_probs=14.4
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.++-||++|+|||+.+.
T Consensus 69 ~vll~G~~GtGKT~la~ 85 (309)
T 3syl_A 69 HMSFTGNPGTGKTTVAL 85 (309)
T ss_dssp EEEEEECTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 58899999999997654
No 92
>1rif_A DAR protein, DNA helicase UVSW; bacteriophage, RECG, SF2, DNA binding protein; HET: DNA; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.23
Probab=71.79 E-value=1 Score=38.68 Aligned_cols=30 Identities=7% Similarity=0.015 Sum_probs=19.5
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehHHHH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
.+..++.+.++ | ..++||+|||.+...++.
T Consensus 121 ai~~~l~~~~~-l-l~~~tGsGKT~~~~~~~~ 150 (282)
T 1rif_A 121 AVFEGLVNRRR-I-LNLPTSAGRSLIQALLAR 150 (282)
T ss_dssp HHHHHHHHSEE-E-ECCCTTSCHHHHHHHHHH
T ss_pred HHHHHHhcCCe-E-EEcCCCCCcHHHHHHHHH
Confidence 34455566554 3 379999999987654433
No 93
>1t6n_A Probable ATP-dependent RNA helicase; RECA-like fold, PRE-mRNA processing protein; HET: FLC; 1.94A {Homo sapiens} SCOP: c.37.1.19
Probab=71.43 E-value=1 Score=36.94 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=18.0
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 43 ~~i~~~~~~~~--~li~~~TGsGKT~~ 67 (220)
T 1t6n_A 43 ECIPQAILGMD--VLCQAKSGMGKTAV 67 (220)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHhCCCC--EEEECCCCCchhhh
Confidence 34556677876 45667999999955
No 94
>3co5_A Putative two-component system transcriptional RES regulator; structural genomics, APC89341.1; 2.40A {Neisseria gonorrhoeae}
Probab=71.41 E-value=0.56 Score=36.16 Aligned_cols=18 Identities=11% Similarity=0.215 Sum_probs=14.4
Q ss_pred hhhhhhhcccCCCceEee
Q psy7226 60 NATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm 77 (279)
+..|+-||++|+|||+..
T Consensus 27 ~~~vll~G~~GtGKt~lA 44 (143)
T 3co5_A 27 TSPVFLTGEAGSPFETVA 44 (143)
T ss_dssp SSCEEEEEETTCCHHHHH
T ss_pred CCcEEEECCCCccHHHHH
Confidence 345788999999999654
No 95
>2qz4_A Paraplegin; AAA+, SPG7, protease, ADP, structural genomics, structural G consortium, SGC, ATP-binding, nucleotide-binding, hydrolase; HET: ADP; 2.22A {Homo sapiens}
Probab=70.83 E-value=0.49 Score=39.87 Aligned_cols=20 Identities=35% Similarity=0.441 Sum_probs=15.7
Q ss_pred hhhhhhcccCCCceEeehHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gi 80 (279)
..|+-||++|+|||+.+..+
T Consensus 40 ~~vll~G~~GtGKT~la~~l 59 (262)
T 2qz4_A 40 KGALLLGPPGCGKTLLAKAV 59 (262)
T ss_dssp CEEEEESCTTSSHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHH
Confidence 45789999999999765433
No 96
>3fmo_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 2.51A {Homo sapiens}
Probab=70.65 E-value=0.98 Score=39.52 Aligned_cols=26 Identities=31% Similarity=0.374 Sum_probs=18.3
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.+..++.|..-.+++.++||||||.+
T Consensus 122 ai~~il~~~~~~~l~~a~TGsGKT~a 147 (300)
T 3fmo_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAA 147 (300)
T ss_dssp HHHHHTSSSCCCEEEECCTTSSHHHH
T ss_pred HHHHHHcCCCCeEEEECCCCCCccHH
Confidence 34556676333467889999999975
No 97
>2fz4_A DNA repair protein RAD25; RECA-like domain, DNA damage recognition domain, DNA binding; HET: DNA; 2.40A {Archaeoglobus fulgidus} SCOP: c.37.1.19
Probab=70.38 E-value=0.98 Score=38.06 Aligned_cols=27 Identities=22% Similarity=0.107 Sum_probs=18.9
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSA 79 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~G 79 (279)
.+..++++.+ ++.+|+||+|||+....
T Consensus 101 ai~~~~~~~~--~ll~~~tG~GKT~~a~~ 127 (237)
T 2fz4_A 101 ALERWLVDKR--GCIVLPTGSGKTHVAMA 127 (237)
T ss_dssp HHHHHTTTSE--EEEEESSSTTHHHHHHH
T ss_pred HHHHHHhCCC--EEEEeCCCCCHHHHHHH
Confidence 4445666655 56678999999987543
No 98
>2c9o_A RUVB-like 1; hexameric helicase, AAA+-ATPase, ATP-binding, chromatin regulator, growth regulation, hydrolase, nuclear protein, DNA recombination; HET: ADP; 2.2A {Homo sapiens} PDB: 2xsz_A*
Probab=69.86 E-value=0.65 Score=43.25 Aligned_cols=46 Identities=17% Similarity=0.155 Sum_probs=28.2
Q ss_pred EeeecccCCCCCCcceehhhhHHhHHhhhcchh--hhhhhhcccCCCceEeeh
Q psy7226 28 FIFDNIFGPNDSNETIFTEVLVPLINHMFNGIN--ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 28 f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n--~~i~aYG~tgSGKTyTm~ 78 (279)
+.||.+.+ |+++.+.+ ..++..+..|.. ..++-||++|+|||+...
T Consensus 34 ~~~~~iiG----~~~~~~~l-~~~~~~~~~~~~~~~~iLl~GppGtGKT~la~ 81 (456)
T 2c9o_A 34 QAASGLVG----QENAREAC-GVIVELIKSKKMAGRAVLLAGPPGTGKTALAL 81 (456)
T ss_dssp SEETTEES----CHHHHHHH-HHHHHHHHTTCCTTCEEEEECCTTSSHHHHHH
T ss_pred hchhhccC----HHHHHHHH-HHHHHHHHhCCCCCCeEEEECCCcCCHHHHHH
Confidence 44555553 44444433 445555555543 257889999999997654
No 99
>2b8t_A Thymidine kinase; deoxyribonucleoside kinase, zinc-binding domain, TK1, UU-TK, transferase; HET: THM; 2.00A {Ureaplasma parvum} SCOP: c.37.1.24 g.39.1.14 PDB: 2uz3_A*
Probab=69.52 E-value=0.91 Score=38.31 Aligned_cols=26 Identities=15% Similarity=-0.004 Sum_probs=20.4
Q ss_pred hhhhhhcccCCCceEeehHHHHHHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMIMKTLQ 86 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii~r~l~ 86 (279)
..++-||+.|+|||..+.+++.++..
T Consensus 13 ~i~litG~mGsGKTT~ll~~~~r~~~ 38 (223)
T 2b8t_A 13 WIEFITGPMFAGKTAELIRRLHRLEY 38 (223)
T ss_dssp EEEEEECSTTSCHHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHHh
Confidence 35677899999999988888776643
No 100
>3fe2_A Probable ATP-dependent RNA helicase DDX5; DEAD, ADP, ATP-binding, hydrolase, nucleotide- RNA-binding, methylation, mRNA processing, mRNA S nucleus; HET: ADP; 2.60A {Homo sapiens} PDB: 4a4d_A
Probab=69.49 E-value=1.1 Score=37.46 Aligned_cols=26 Identities=27% Similarity=0.406 Sum_probs=18.6
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
...+..+++|.++ +..++||||||.+
T Consensus 57 ~~~i~~~~~g~~~--l~~apTGsGKT~~ 82 (242)
T 3fe2_A 57 AQGWPVALSGLDM--VGVAQTGSGKTLS 82 (242)
T ss_dssp HHHHHHHHHTCCE--EEEECTTSCHHHH
T ss_pred HHHHHHHhCCCCE--EEECCCcCHHHHH
Confidence 3445566788764 5567999999976
No 101
>1w5s_A Origin recognition complex subunit 2 ORC2; replication, CDC6, DNA replication initiation, DNA BIND protein, AAA+ ATPase; HET: ADP; 2.4A {Aeropyrum pernix} SCOP: a.4.5.11 c.37.1.20 PDB: 1w5t_A*
Probab=69.40 E-value=0.91 Score=40.80 Aligned_cols=28 Identities=25% Similarity=0.442 Sum_probs=19.5
Q ss_pred Hhhhcc---hhhhhhh--hcccCCCceEeehHH
Q psy7226 53 NHMFNG---INATLLA--YGQTGGGKTYTVSAM 80 (279)
Q Consensus 53 ~~~l~G---~n~~i~a--YG~tgSGKTyTm~Gi 80 (279)
..+..| ....++- ||+.|+|||+.+.-+
T Consensus 40 ~~~~~~~~~~~~~~li~i~G~~G~GKT~L~~~~ 72 (412)
T 1w5s_A 40 NRLLSGAGLSDVNMIYGSIGRVGIGKTTLAKFT 72 (412)
T ss_dssp HHHHTSSCBCCEEEEEECTTCCSSSHHHHHHHH
T ss_pred HHHhcCCCCCCCEEEEeCcCcCCCCHHHHHHHH
Confidence 444444 4456778 999999999765543
No 102
>3ber_A Probable ATP-dependent RNA helicase DDX47; DEAD, AMP, structural genomics, structural GEN consortium, SGC, ATP-binding, hydrolase; HET: AMP PGE; 1.40A {Homo sapiens}
Probab=69.27 E-value=1.2 Score=37.69 Aligned_cols=25 Identities=28% Similarity=0.462 Sum_probs=17.6
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 72 ~~i~~i~~~~~--~lv~a~TGsGKT~~ 96 (249)
T 3ber_A 72 EAIPLALQGRD--IIGLAETGSGKTGA 96 (249)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHhCCCC--EEEEcCCCCCchhH
Confidence 34455667766 45567999999965
No 103
>3n70_A Transport activator; sigma-54, ntpase, PSI, MCSG, structural genomics, center for structural genomics; 2.80A {Escherichia coli}
Probab=69.22 E-value=0.67 Score=35.75 Aligned_cols=19 Identities=21% Similarity=0.457 Sum_probs=15.0
Q ss_pred chhhhhhhhcccCCCceEe
Q psy7226 58 GINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 58 G~n~~i~aYG~tgSGKTyT 76 (279)
..+..|+-||++|+|||+.
T Consensus 22 ~~~~~vll~G~~GtGKt~l 40 (145)
T 3n70_A 22 ETDIAVWLYGAPGTGRMTG 40 (145)
T ss_dssp TCCSCEEEESSTTSSHHHH
T ss_pred CCCCCEEEECCCCCCHHHH
Confidence 3445678999999999954
No 104
>3eiq_A Eukaryotic initiation factor 4A-I; PDCD4, anti-oncogene, apoptosis, cell cycle, nucleus, phosph RNA-binding, ATP-binding, helicase, hydrolase; 3.50A {Homo sapiens}
Probab=69.01 E-value=1.3 Score=39.73 Aligned_cols=25 Identities=36% Similarity=0.466 Sum_probs=19.4
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..++.|.+ ++..++||||||.+
T Consensus 69 ~~i~~~~~~~~--~lv~a~TGsGKT~~ 93 (414)
T 3eiq_A 69 RAILPCIKGYD--VIAQAQSGTGKTAT 93 (414)
T ss_dssp HHHHHHHTTCC--EEECCCSCSSSHHH
T ss_pred HHhHHHhCCCC--EEEECCCCCcccHH
Confidence 45566778887 56779999999976
No 105
>2oxc_A Probable ATP-dependent RNA helicase DDX20; DEAD, structural genomics, structural genomics consortium, SGC, hydrolase; HET: ADP; 1.30A {Homo sapiens} PDB: 3b7g_A*
Probab=68.97 E-value=1.2 Score=36.88 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=17.9
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.|+ +..++||||||.+
T Consensus 53 ~~i~~~~~~~~~--l~~a~TGsGKT~~ 77 (230)
T 2oxc_A 53 KAIPLGRCGLDL--IVQAKSGTGKTCV 77 (230)
T ss_dssp HHHHHHHTTCCE--EEECCTTSSHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCCcHHHH
Confidence 344556778764 5567999999965
No 106
>3llm_A ATP-dependent RNA helicase A; alpha-beta-alpha, structural genomics, structural genomics consortium, SGC, activator, ATP-binding, DNA-binding; HET: ADP; 2.80A {Homo sapiens}
Probab=68.82 E-value=1.2 Score=37.33 Aligned_cols=28 Identities=25% Similarity=0.367 Sum_probs=18.6
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
..++..+..|.+ ++..|+||||||..+.
T Consensus 67 ~~~i~~i~~g~~--~~i~g~TGsGKTt~~~ 94 (235)
T 3llm_A 67 SEILEAISQNSV--VIIRGATGCGKTTQVP 94 (235)
T ss_dssp HHHHHHHHHCSE--EEEECCTTSSHHHHHH
T ss_pred HHHHHHHhcCCE--EEEEeCCCCCcHHhHH
Confidence 344455556654 4667999999996543
No 107
>1njg_A DNA polymerase III subunit gamma; rossman-like fold, AAA+ ATPase domains, sensor 1, sensor 2, transferase; HET: DNA; 2.20A {Escherichia coli} SCOP: c.37.1.20 PDB: 1njf_A*
Probab=68.65 E-value=0.87 Score=36.99 Aligned_cols=19 Identities=32% Similarity=0.377 Sum_probs=15.2
Q ss_pred hhhhhcccCCCceEeehHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gi 80 (279)
.++-||++|+|||+.+.-+
T Consensus 47 ~~ll~G~~G~GKT~l~~~~ 65 (250)
T 1njg_A 47 AYLFSGTRGVGKTSIARLL 65 (250)
T ss_dssp EEEEECSTTSCHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 5788999999999765433
No 108
>1lv7_A FTSH; alpha/beta domain, four helix bundle, hydrolase; 1.50A {Escherichia coli} SCOP: c.37.1.20
Probab=68.54 E-value=0.58 Score=39.59 Aligned_cols=18 Identities=33% Similarity=0.477 Sum_probs=14.7
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..++-||++|+|||+.+.
T Consensus 46 ~~vll~G~~GtGKT~la~ 63 (257)
T 1lv7_A 46 KGVLMVGPPGTGKTLLAK 63 (257)
T ss_dssp CEEEEECCTTSCHHHHHH
T ss_pred CeEEEECcCCCCHHHHHH
Confidence 358899999999997654
No 109
>4fcw_A Chaperone protein CLPB; AAA domain; HET: ADP; 2.35A {Thermus thermophilus} PDB: 4fcv_A* 4fd2_A* 4fct_A*
Probab=68.23 E-value=0.87 Score=39.39 Aligned_cols=17 Identities=41% Similarity=0.517 Sum_probs=14.2
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..++-+|++|+|||+++
T Consensus 48 ~~~ll~G~~GtGKt~la 64 (311)
T 4fcw_A 48 GSFLFLGPTGVGKTELA 64 (311)
T ss_dssp EEEEEESCSSSSHHHHH
T ss_pred eEEEEECCCCcCHHHHH
Confidence 46888999999999654
No 110
>3pxg_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 3.65A {Bacillus subtilis}
Probab=68.11 E-value=1.3 Score=41.31 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=23.8
Q ss_pred hHHhHHhhhcchhhhhhhhcccCCCceEeehHHHHH
Q psy7226 48 LVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 48 ~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r 83 (279)
+..++..+-.+....++-||++|+|||+.+.++..+
T Consensus 189 i~~l~~~l~r~~~~~~LL~G~pG~GKT~la~~la~~ 224 (468)
T 3pxg_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQ 224 (468)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeEEECCCCCCHHHHHHHHHHH
Confidence 344444443444456788999999999877665444
No 111
>2ewv_A Twitching motility protein PILT; pilus retraction motor, ATPase, hexameric PILT, protein TRAN; HET: ADP; 2.80A {Aquifex aeolicus} PDB: 2eww_A* 2gsz_A*
Probab=67.97 E-value=0.78 Score=41.69 Aligned_cols=18 Identities=39% Similarity=0.671 Sum_probs=14.4
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..+.-.|+||||||+++.
T Consensus 137 ~~i~ivG~~GsGKTTll~ 154 (372)
T 2ewv_A 137 GLILVTGPTGSGKSTTIA 154 (372)
T ss_dssp EEEEEECSSSSSHHHHHH
T ss_pred CEEEEECCCCCCHHHHHH
Confidence 356677999999997765
No 112
>2zan_A Vacuolar protein sorting-associating protein 4B; SKD1, VPS4B, AAA ATPase, ATP-binding, coiled coil, membrane, nucleotide-binding, phosphorylation; HET: ATP; 3.00A {Mus musculus} PDB: 2zam_A* 2zao_A* 2jqh_A 2jqk_A 1wr0_A 2jq9_A 2k3w_A 1yxr_A
Probab=67.85 E-value=0.23 Score=46.23 Aligned_cols=18 Identities=33% Similarity=0.722 Sum_probs=14.6
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..|+-||++|+|||+.+.
T Consensus 168 ~~vLL~GppGtGKT~lA~ 185 (444)
T 2zan_A 168 RGILLFGPPGTGKSYLAK 185 (444)
T ss_dssp SEEEEECSTTSSHHHHHH
T ss_pred ceEEEECCCCCCHHHHHH
Confidence 458889999999996543
No 113
>1iqp_A RFCS; clamp loader, extended AAA-ATPase domain, complex with ADP, replication; HET: ADP; 2.80A {Pyrococcus furiosus} SCOP: a.80.1.1 c.37.1.20
Probab=67.44 E-value=0.88 Score=39.41 Aligned_cols=25 Identities=36% Similarity=0.399 Sum_probs=17.9
Q ss_pred cchhhhhhhhcccCCCceEeehHHH
Q psy7226 57 NGINATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~Gii 81 (279)
.|....++-||+.|+|||+++.-+.
T Consensus 43 ~~~~~~~ll~G~~G~GKT~la~~l~ 67 (327)
T 1iqp_A 43 TGSMPHLLFAGPPGVGKTTAALALA 67 (327)
T ss_dssp HTCCCEEEEESCTTSSHHHHHHHHH
T ss_pred cCCCCeEEEECcCCCCHHHHHHHHH
Confidence 3443348889999999997765443
No 114
>3fmp_B ATP-dependent RNA helicase DDX19B; nuclear porin, nuclear pore complex, nucleocytoplasmic trans mRNA export, protein interaction, beta-propeller; HET: ADP; 3.19A {Homo sapiens}
Probab=67.20 E-value=1.3 Score=41.03 Aligned_cols=26 Identities=31% Similarity=0.374 Sum_probs=19.0
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.+..++.|.+-.++..|+||||||..
T Consensus 122 ai~~il~~~~~~~l~~a~TGsGKT~~ 147 (479)
T 3fmp_B 122 ALPLMLAEPPQNLIAQSQSGTGKTAA 147 (479)
T ss_dssp HHHHHTSBSCCEEEEECCSSSSHHHH
T ss_pred HHHHHHcCCCCcEEEEcCCCCchhHH
Confidence 34455666445678889999999966
No 115
>1q0u_A Bstdead; DEAD protein, RNA binding protein; 1.85A {Geobacillus stearothermophilus} SCOP: c.37.1.19
Probab=67.07 E-value=0.9 Score=37.32 Aligned_cols=25 Identities=32% Similarity=0.424 Sum_probs=17.9
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.++ +..++||||||.+
T Consensus 33 ~~i~~~~~~~~~--lv~a~TGsGKT~~ 57 (219)
T 1q0u_A 33 RIIPGALRGESM--VGQSQTGTGKTHA 57 (219)
T ss_dssp HHHHHHHHTCCE--EEECCSSHHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHH
Confidence 345556677764 5668999999965
No 116
>1ofh_A ATP-dependent HSL protease ATP-binding subunit HSLU; chaperone, hydrolase, ATP-binding; HET: ADP; 2.5A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1ofi_A*
Probab=67.05 E-value=0.64 Score=40.06 Aligned_cols=19 Identities=37% Similarity=0.452 Sum_probs=15.3
Q ss_pred hhhhhhhcccCCCceEeeh
Q psy7226 60 NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~ 78 (279)
...++-||++|+|||+.+.
T Consensus 50 ~~~vll~G~~GtGKT~la~ 68 (310)
T 1ofh_A 50 PKNILMIGPTGVGKTEIAR 68 (310)
T ss_dssp CCCEEEECCTTSSHHHHHH
T ss_pred CceEEEECCCCCCHHHHHH
Confidence 3467889999999997654
No 117
>2chq_A Replication factor C small subunit; DNA-binding protein, DNA replication, clamp loader, AAA+ ATP ATP-binding, nucleotide-binding; HET: ANP; 3.5A {Archaeoglobus fulgidus} PDB: 2chv_A
Probab=67.01 E-value=0.83 Score=39.43 Aligned_cols=24 Identities=38% Similarity=0.355 Sum_probs=17.5
Q ss_pred cchhhhhhhhcccCCCceEeehHH
Q psy7226 57 NGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.|....++-||+.|+|||+++.-+
T Consensus 35 ~~~~~~~ll~G~~G~GKt~la~~l 58 (319)
T 2chq_A 35 RKNIPHLLFSGPPGTGKTATAIAL 58 (319)
T ss_dssp TTCCCCEEEESSSSSSHHHHHHHH
T ss_pred CCCCCeEEEECcCCcCHHHHHHHH
Confidence 454444888999999999765433
No 118
>2orw_A Thymidine kinase; TMTK, TP4A, transferase; HET: 4TA; 1.50A {Thermotoga maritima} PDB: 2qpo_A 2qq0_A* 2qqe_A*
Probab=66.81 E-value=1.1 Score=36.28 Aligned_cols=23 Identities=17% Similarity=0.114 Sum_probs=18.2
Q ss_pred hhhhcccCCCceEeehHHHHHHH
Q psy7226 63 LLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
++-||+.|+|||+.+.+++.+..
T Consensus 6 ~vi~G~~gsGKTT~ll~~~~~~~ 28 (184)
T 2orw_A 6 TVITGPMYSGKTTELLSFVEIYK 28 (184)
T ss_dssp EEEEESTTSSHHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHH
Confidence 46789999999988777766553
No 119
>3oiy_A Reverse gyrase helicase domain; topoisomerase, DNA supercoiling, archaea, isomeras; 2.35A {Thermotoga maritima} PDB: 3p4y_A 3p4x_A*
Probab=66.41 E-value=1.5 Score=39.56 Aligned_cols=25 Identities=24% Similarity=0.264 Sum_probs=18.6
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceE
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTY 75 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTy 75 (279)
...+..+++|.| ++..++||||||.
T Consensus 27 ~~~i~~i~~~~~--~lv~apTGsGKT~ 51 (414)
T 3oiy_A 27 RLWAKRIVQGKS--FTMVAPTGVGKTT 51 (414)
T ss_dssp HHHHHHHTTTCC--EECCSCSSSSHHH
T ss_pred HHHHHHHhcCCC--EEEEeCCCCCHHH
Confidence 344556677876 4677899999998
No 120
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=66.05 E-value=1.3 Score=44.57 Aligned_cols=48 Identities=33% Similarity=0.468 Sum_probs=26.1
Q ss_pred eeecccCCCCCCcceehhhhHHhH-Hhhhcchh----hhhhhhcccCCCceEe
Q psy7226 29 IFDNIFGPNDSNETIFTEVLVPLI-NHMFNGIN----ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 29 ~FD~Vf~~~a~Q~~vf~~~~~plv-~~~l~G~n----~~i~aYG~tgSGKTyT 76 (279)
.||.|-+-+..-+++.+.+..|+. ..++.++. ..|+-||+.|+|||..
T Consensus 202 ~~~dIgGl~~~~~~l~e~v~~pl~~p~~f~~~g~~~p~GILL~GPPGTGKT~L 254 (806)
T 3cf2_A 202 GYDDIGGCRKQLAQIKEMVELPLRHPALFKAIGVKPPRGILLYGPPGTGKTLI 254 (806)
T ss_dssp CGGGCCSCCTTHHHHHHHHHHHHHCCGGGTSCCCCCCCEEEEECCTTSCHHHH
T ss_pred ChhhhcCHHHHHHHHHHHHHHHccCHHHHhhcCCCCCCeEEEECCCCCCHHHH
Confidence 344444433332333333334444 23444433 3589999999999954
No 121
>1iy2_A ATP-dependent metalloprotease FTSH; AAA domain fold, hydrolase; 3.20A {Thermus thermophilus} SCOP: c.37.1.20
Probab=65.94 E-value=0.71 Score=39.67 Aligned_cols=16 Identities=38% Similarity=0.459 Sum_probs=13.9
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
++-||++|+|||+.+.
T Consensus 76 vll~Gp~GtGKTtl~~ 91 (278)
T 1iy2_A 76 VLLVGPPGVGKTHLAR 91 (278)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCcChHHHHHH
Confidence 7889999999997754
No 122
>3pvs_A Replication-associated recombination protein A; maintenance of genome stability Pro recombination; 2.50A {Escherichia coli}
Probab=65.84 E-value=0.78 Score=42.83 Aligned_cols=28 Identities=29% Similarity=0.461 Sum_probs=19.4
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
.+...+-.|.-..++-||++|+|||+.+
T Consensus 40 ~L~~~i~~~~~~~vLL~GppGtGKTtlA 67 (447)
T 3pvs_A 40 PLPRAIEAGHLHSMILWGPPGTGKTTLA 67 (447)
T ss_dssp HHHHHHHHTCCCEEEEECSTTSSHHHHH
T ss_pred HHHHHHHcCCCcEEEEECCCCCcHHHHH
Confidence 3333334455557899999999999654
No 123
>1gvn_B Zeta; postsegregational killing system, plasmid; 1.95A {Streptococcus pyogenes} SCOP: c.37.1.21 PDB: 3q8x_B*
Probab=65.35 E-value=1.2 Score=38.72 Aligned_cols=18 Identities=44% Similarity=0.514 Sum_probs=14.2
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..|+..|++|||||+...
T Consensus 34 ~livl~G~sGsGKSTla~ 51 (287)
T 1gvn_B 34 TAFLLGGQPGSGKTSLRS 51 (287)
T ss_dssp EEEEEECCTTSCTHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 457788999999996543
No 124
>3pfi_A Holliday junction ATP-dependent DNA helicase RUVB; probable holliday junction DNA helicase; HET: ADP; 2.69A {Campylobacter jejuni subsp}
Probab=65.33 E-value=0.87 Score=40.06 Aligned_cols=18 Identities=33% Similarity=0.396 Sum_probs=15.0
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..|+-||++|+|||+.+.
T Consensus 56 ~~vll~G~~GtGKT~la~ 73 (338)
T 3pfi_A 56 DHILFSGPAGLGKTTLAN 73 (338)
T ss_dssp CCEEEECSTTSSHHHHHH
T ss_pred CeEEEECcCCCCHHHHHH
Confidence 468999999999997644
No 125
>2oap_1 GSPE-2, type II secretion system protein; hexameric ATPase, hydrolase; HET: ANP; 2.95A {Archaeoglobus fulgidus} PDB: 2oaq_1
Probab=64.71 E-value=1.2 Score=42.27 Aligned_cols=20 Identities=30% Similarity=0.499 Sum_probs=15.0
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
.|.+ ++-.|+||||||++|.
T Consensus 259 ~g~~--i~I~GptGSGKTTlL~ 278 (511)
T 2oap_1 259 HKFS--AIVVGETASGKTTTLN 278 (511)
T ss_dssp TTCC--EEEEESTTSSHHHHHH
T ss_pred CCCE--EEEECCCCCCHHHHHH
Confidence 3554 5566999999998765
No 126
>1hqc_A RUVB; extended AAA-ATPase domain, complex with nucleotide, hydrolase; HET: ADE; 3.20A {Thermus thermophilus} SCOP: a.4.5.11 c.37.1.20 PDB: 1ixs_B* 1ixr_C*
Probab=64.49 E-value=1.7 Score=37.68 Aligned_cols=20 Identities=35% Similarity=0.396 Sum_probs=15.8
Q ss_pred hhhhhhhhcccCCCceEeeh
Q psy7226 59 INATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 59 ~n~~i~aYG~tgSGKTyTm~ 78 (279)
....++-||++|+|||+.+.
T Consensus 37 ~~~~vll~G~~GtGKT~la~ 56 (324)
T 1hqc_A 37 PLEHLLLFGPPGLGKTTLAH 56 (324)
T ss_dssp CCCCCEEECCTTCCCHHHHH
T ss_pred CCCcEEEECCCCCCHHHHHH
Confidence 33568889999999996644
No 127
>1g5t_A COB(I)alamin adenosyltransferase; P-loop protein, cobalamin biosynthesis, RECA fold; HET: ATP; 1.80A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1g5r_A* 1g64_A*
Probab=64.40 E-value=1.3 Score=36.64 Aligned_cols=28 Identities=18% Similarity=0.379 Sum_probs=24.6
Q ss_pred hhhhhhhcccCCCceEeehHHHHHHHHH
Q psy7226 60 NATLLAYGQTGGGKTYTVSAMIMKTLQH 87 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~Gii~r~l~~ 87 (279)
.+.|+.|+..|.|||+..+|+..|++..
T Consensus 28 ~g~i~v~tG~GkGKTTaA~GlalRA~g~ 55 (196)
T 1g5t_A 28 RGIIIVFTGNGKGKTTAAFGTAARAVGH 55 (196)
T ss_dssp CCCEEEEESSSSCHHHHHHHHHHHHHHT
T ss_pred CceEEEECCCCCCHHHHHHHHHHHHHHC
Confidence 4678999999999999999999988765
No 128
>1w36_D RECD, exodeoxyribonuclease V alpha chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 PDB: 3k70_D*
Probab=64.34 E-value=1.3 Score=42.84 Aligned_cols=25 Identities=28% Similarity=0.401 Sum_probs=19.3
Q ss_pred hhhhhhcccCCCceEeehHHHHHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
..++..|++|||||+++..+++...
T Consensus 165 ~~~vi~G~pGTGKTt~l~~ll~~l~ 189 (608)
T 1w36_D 165 RISVISGGPGTGKTTTVAKLLAALI 189 (608)
T ss_dssp SEEEEECCTTSTHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3457779999999999887766543
No 129
>2j0s_A ATP-dependent RNA helicase DDX48; mRNA processing, phosphorylation, rRNA processing, mRNA splicing, mRNA transport; HET: ANP; 2.21A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 2j0q_A* 2hyi_C* 3ex7_C* 2xb2_A* 2hxy_A 2j0u_A 2j0u_B 2zu6_A
Probab=64.30 E-value=1.7 Score=39.00 Aligned_cols=25 Identities=36% Similarity=0.582 Sum_probs=18.5
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
.+..+++|.+ ++..++||||||.+.
T Consensus 67 ai~~i~~~~~--~lv~a~TGsGKT~~~ 91 (410)
T 2j0s_A 67 AIKQIIKGRD--VIAQSQSGTGKTATF 91 (410)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHhCCCC--EEEECCCCCCchHHH
Confidence 4455677877 566789999999763
No 130
>1n0w_A DNA repair protein RAD51 homolog 1; DNA repair, homologous recombination, breast cancer susceptibility, RECA-like ATPase, protein complex; HET: DNA MSE; 1.70A {Homo sapiens} SCOP: c.37.1.11
Probab=64.05 E-value=1 Score=37.21 Aligned_cols=33 Identities=18% Similarity=0.318 Sum_probs=22.4
Q ss_pred hHHhHHhhhcc-h--hhhhhhhcccCCCceEeehHH
Q psy7226 48 LVPLINHMFNG-I--NATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 48 ~~plv~~~l~G-~--n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.-+-+|.++.| . ...+.-+|++|+|||..+.-+
T Consensus 9 G~~~LD~~l~ggi~~G~~~~i~G~~GsGKTtl~~~l 44 (243)
T 1n0w_A 9 GSKELDKLLQGGIETGSITEMFGEFRTGKTQICHTL 44 (243)
T ss_dssp SCHHHHHHTTTSEETTSEEEEECCTTSSHHHHHHHH
T ss_pred CChHHHHhhcCCCcCCeEEEEECCCCCcHHHHHHHH
Confidence 34567777753 2 335667899999999876533
No 131
>3u61_B DNA polymerase accessory protein 44; AAA+, ATP hydrolase, clamp loader, sliding clamp, primer-TEM DNA, DNA binding protein-DNA complex; HET: DNA ADP 08T; 3.20A {Enterobacteria phage T4} PDB: 3u5z_B* 3u60_B*
Probab=63.48 E-value=1.8 Score=37.80 Aligned_cols=20 Identities=30% Similarity=0.380 Sum_probs=15.2
Q ss_pred hhhhhhcccCCCceEeehHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gi 80 (279)
..++-||++|+|||+++.-+
T Consensus 49 ~~~L~~G~~G~GKT~la~~l 68 (324)
T 3u61_B 49 HIILHSPSPGTGKTTVAKAL 68 (324)
T ss_dssp SEEEECSSTTSSHHHHHHHH
T ss_pred eEEEeeCcCCCCHHHHHHHH
Confidence 45678899999999775433
No 132
>3fht_A ATP-dependent RNA helicase DDX19B; DBP5, DEAD-box helicase, RNA dependent ATPase, mRNA export, nucleocytoplasmic transport, NUP214, CAN; HET: ANP; 2.20A {Homo sapiens} PDB: 3ews_A* 3g0h_A* 3fhc_B
Probab=63.32 E-value=1.7 Score=38.84 Aligned_cols=28 Identities=29% Similarity=0.315 Sum_probs=19.7
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
...+..++.|.+-.++..++||||||.+
T Consensus 53 ~~~i~~~~~~~~~~~lv~apTGsGKT~~ 80 (412)
T 3fht_A 53 ENALPLMLAEPPQNLIAQSQSGTGKTAA 80 (412)
T ss_dssp HHHHHHHHSSSCCCEEEECCTTSCHHHH
T ss_pred HHHHHHHhcCCCCeEEEECCCCchHHHH
Confidence 3445566676444567778999999976
No 133
>2r44_A Uncharacterized protein; putative ATPase, structural genomics, joint center for struc genomics, JCSG; HET: MSE PG4; 2.00A {Cytophaga hutchinsonii atcc 33406}
Probab=62.90 E-value=0.88 Score=40.00 Aligned_cols=29 Identities=28% Similarity=0.305 Sum_probs=18.9
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeehH
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVSA 79 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~G 79 (279)
..++..+..|. .++-||++|+|||+.+..
T Consensus 37 ~~l~~~l~~~~--~vll~G~pGtGKT~la~~ 65 (331)
T 2r44_A 37 NRLLIGICTGG--HILLEGVPGLAKTLSVNT 65 (331)
T ss_dssp HHHHHHHHHTC--CEEEESCCCHHHHHHHHH
T ss_pred HHHHHHHHcCC--eEEEECCCCCcHHHHHHH
Confidence 33333444443 578899999999976543
No 134
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=62.55 E-value=1.5 Score=35.93 Aligned_cols=24 Identities=17% Similarity=0.127 Sum_probs=19.0
Q ss_pred hhhhhcccCCCceEeehHHHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
..+-||+.|||||..+.+++.+..
T Consensus 10 i~v~~G~mgsGKTT~ll~~a~r~~ 33 (191)
T 1xx6_A 10 VEVIVGPMYSGKSEELIRRIRRAK 33 (191)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHH
Confidence 356789999999988777776653
No 135
>2w0m_A SSO2452; RECA, SSPF, unknown FUN; 2.0A {Sulfolobus solfataricus P2}
Probab=62.49 E-value=2.2 Score=34.73 Aligned_cols=32 Identities=25% Similarity=0.321 Sum_probs=20.3
Q ss_pred HhHHhhhc-chh--hhhhhhcccCCCceEeehHHH
Q psy7226 50 PLINHMFN-GIN--ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 50 plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~Gii 81 (279)
+-++.++. |.. ..+.-+|++|+|||+.+.-+.
T Consensus 10 ~~Ld~~~~ggi~~G~~~~i~G~~GsGKTtl~~~l~ 44 (235)
T 2w0m_A 10 LDFDKLIQGGIPQGFFIALTGEPGTGKTIFSLHFI 44 (235)
T ss_dssp HHHHGGGTTSEETTCEEEEECSTTSSHHHHHHHHH
T ss_pred hHHHHHhcCCCcCCCEEEEEcCCCCCHHHHHHHHH
Confidence 44556554 332 235567999999998765443
No 136
>1s2m_A Putative ATP-dependent RNA helicase DHH1; ATP-binding, RNA-binding, RNA binding protein; 2.10A {Saccharomyces cerevisiae} SCOP: c.37.1.19 c.37.1.19 PDB: 2wax_A* 2way_A
Probab=61.94 E-value=1.9 Score=38.46 Aligned_cols=25 Identities=32% Similarity=0.437 Sum_probs=18.3
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..+++|.+ ++..++||||||.+
T Consensus 50 ~~i~~i~~~~~--~li~a~TGsGKT~~ 74 (400)
T 1s2m_A 50 EAIPVAITGRD--ILARAKNGTGKTAA 74 (400)
T ss_dssp HHHHHHHHTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHhcCCC--EEEECCCCcHHHHH
Confidence 44556667776 56678999999965
No 137
>1sxj_E Activator 1 40 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=61.86 E-value=1.5 Score=38.63 Aligned_cols=16 Identities=44% Similarity=0.696 Sum_probs=13.7
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
++-||++|+|||+++.
T Consensus 39 ~ll~Gp~G~GKTtl~~ 54 (354)
T 1sxj_E 39 LLLYGPNGTGKKTRCM 54 (354)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7789999999997654
No 138
>2dr3_A UPF0273 protein PH0284; RECA superfamily ATPase, hexamer, structural genomics; HET: ADP; 2.00A {Pyrococcus horikoshii}
Probab=60.65 E-value=1.9 Score=35.57 Aligned_cols=32 Identities=28% Similarity=0.541 Sum_probs=20.2
Q ss_pred HhHHhhhcc-h--hhhhhhhcccCCCceEeehHHH
Q psy7226 50 PLINHMFNG-I--NATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 50 plv~~~l~G-~--n~~i~aYG~tgSGKTyTm~Gii 81 (279)
+-+|.++.| . ...++-+|++|+|||..+.-++
T Consensus 10 ~~LD~~l~gGl~~G~~~~i~G~~GsGKTtl~~~~~ 44 (247)
T 2dr3_A 10 PGVDEILHGGIPERNVVLLSGGPGTGKTIFSQQFL 44 (247)
T ss_dssp TTHHHHTTTSEETTCEEEEEECTTSSHHHHHHHHH
T ss_pred hhHHHHcCCCCCCCcEEEEECCCCCCHHHHHHHHH
Confidence 345566532 2 2345678999999998755443
No 139
>3upu_A ATP-dependent DNA helicase DDA; RECA-like domain, SH3 domain, PIN-tower interface, coupling hydrolysis to DNA unwinding, ssDNA; 3.30A {Enterobacteria phage T4}
Probab=60.62 E-value=2.5 Score=39.18 Aligned_cols=19 Identities=21% Similarity=0.288 Sum_probs=15.1
Q ss_pred hhhhhcccCCCceEeehHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gi 80 (279)
.++..|..|||||+++.-+
T Consensus 47 ~~li~G~aGTGKT~ll~~~ 65 (459)
T 3upu_A 47 HVTINGPAGTGATTLTKFI 65 (459)
T ss_dssp EEEEECCTTSCHHHHHHHH
T ss_pred EEEEEeCCCCCHHHHHHHH
Confidence 6777899999999876533
No 140
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=60.60 E-value=2.2 Score=42.24 Aligned_cols=37 Identities=22% Similarity=0.258 Sum_probs=25.2
Q ss_pred hHHhHHhhhcchhhhhhhhcccCCCceEeehHHHHHH
Q psy7226 48 LVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 48 ~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
+..+++.+.......++-||++|+|||+.+.++..+.
T Consensus 195 i~~l~~~l~~~~~~~vlL~G~~GtGKT~la~~la~~l 231 (758)
T 1r6b_X 195 LERAIQVLCRRRKNNPLLVGESGVGKTAIAEGLAWRI 231 (758)
T ss_dssp HHHHHHHHTSSSSCEEEEECCTTSSHHHHHHHHHHHH
T ss_pred HHHHHHHHhccCCCCeEEEcCCCCCHHHHHHHHHHHH
Confidence 3445544444445567889999999998877766544
No 141
>3pey_A ATP-dependent RNA helicase DBP5; RECA, DEAD-BOX, ATPase, helicase, mRNA-export, nuclear pore, hydrolase-RNA complex; HET: ADP; 1.40A {Saccharomyces cerevisiae} PDB: 3pew_A* 3pex_A* 3pez_A* 3rrm_A* 3rrn_A* 2kbe_A 3gfp_A 2kbf_A 3pev_A* 3peu_A*
Probab=60.43 E-value=2 Score=37.90 Aligned_cols=28 Identities=21% Similarity=0.334 Sum_probs=19.2
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
..+..++.|..-.++..++||||||.+.
T Consensus 34 ~~i~~~~~~~~~~~lv~a~TGsGKT~~~ 61 (395)
T 3pey_A 34 RALPLLLHNPPRNMIAQSQSGTGKTAAF 61 (395)
T ss_dssp HHHHHHHCSSCCCEEEECCTTSCHHHHH
T ss_pred HHHHHHHcCCCCeEEEECCCCCcHHHHH
Confidence 4455666773344577789999999753
No 142
>2z0m_A 337AA long hypothetical ATP-dependent RNA helicase DEAD; ATP-binding, hydrolase, nucleotide-binding, RNA binding protein, structural genomics; 1.90A {Sulfolobus tokodaii}
Probab=60.26 E-value=2.2 Score=36.76 Aligned_cols=26 Identities=35% Similarity=0.483 Sum_probs=18.3
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
..++.+++|.+ ++..++||||||.+.
T Consensus 23 ~~i~~i~~~~~--~lv~~~TGsGKT~~~ 48 (337)
T 2z0m_A 23 KTIPLMLQGKN--VVVRAKTGSGKTAAY 48 (337)
T ss_dssp HHHHHHHTTCC--EEEECCTTSSHHHHH
T ss_pred HHHHHHhcCCC--EEEEcCCCCcHHHHH
Confidence 34555667776 455689999999653
No 143
>1sxj_B Activator 1 37 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=60.01 E-value=1.6 Score=37.69 Aligned_cols=24 Identities=29% Similarity=0.458 Sum_probs=17.1
Q ss_pred cchhhhhhhhcccCCCceEeehHH
Q psy7226 57 NGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
.|.-..++-||+.|+|||+.+.-+
T Consensus 39 ~~~~~~~ll~G~~G~GKt~la~~l 62 (323)
T 1sxj_B 39 DGNMPHMIISGMPGIGKTTSVHCL 62 (323)
T ss_dssp SCCCCCEEEECSTTSSHHHHHHHH
T ss_pred cCCCCeEEEECcCCCCHHHHHHHH
Confidence 344333888999999999765544
No 144
>2gk6_A Regulator of nonsense transcripts 1; UPF1, helicase, NMD, hydrolase; HET: ADP; 2.40A {Homo sapiens} PDB: 2gjk_A* 2gk7_A 2xzo_A* 2xzp_A
Probab=59.63 E-value=2.2 Score=41.42 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=16.6
Q ss_pred hhhhhcccCCCceEeehHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r 83 (279)
..+..|+.|||||+|+..++..
T Consensus 197 ~~li~GppGTGKT~~~~~~i~~ 218 (624)
T 2gk6_A 197 LSLIQGPPGTGKTVTSATIVYH 218 (624)
T ss_dssp EEEEECCTTSCHHHHHHHHHHH
T ss_pred CeEEECCCCCCHHHHHHHHHHH
Confidence 3456799999999998755443
No 145
>2dhr_A FTSH; AAA+ protein, hexameric Zn metalloprotease, hydrolase; HET: ADP; 3.90A {Thermus thermophilus}
Probab=59.41 E-value=0.57 Score=44.47 Aligned_cols=16 Identities=38% Similarity=0.459 Sum_probs=13.5
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
|+-||++|+|||+.+.
T Consensus 67 vLL~GppGtGKTtLar 82 (499)
T 2dhr_A 67 VLLVGPPGVGKTHLAR 82 (499)
T ss_dssp EEEECSSSSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 7899999999996543
No 146
>1in4_A RUVB, holliday junction DNA helicase RUVB; AAA+-class ATPase, winged-helix domain, ATP hydrolysis, walker A, walker B, sensor 1, sensor 2; HET: ADP; 1.60A {Thermotoga maritima} SCOP: a.4.5.11 c.37.1.20 PDB: 1in5_A* 1in6_A* 1in8_A* 1in7_A* 1j7k_A*
Probab=59.36 E-value=1.1 Score=39.72 Aligned_cols=17 Identities=35% Similarity=0.389 Sum_probs=13.7
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.++-||++|+|||+.+.
T Consensus 53 ~~ll~Gp~G~GKTTLa~ 69 (334)
T 1in4_A 53 HVLLAGPPGLGKTTLAH 69 (334)
T ss_dssp CEEEESSTTSSHHHHHH
T ss_pred eEEEECCCCCcHHHHHH
Confidence 46779999999997654
No 147
>4gp7_A Metallophosphoesterase; polynucleotide kinase phosphatase, RNA repair, transferase; HET: ATP CIT; 2.00A {Clostridium thermocellum} PDB: 4gp6_A*
Probab=59.10 E-value=1 Score=35.81 Aligned_cols=16 Identities=25% Similarity=0.509 Sum_probs=12.5
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
+.-.|++|||||+.+-
T Consensus 12 ~~l~G~nGsGKSTl~~ 27 (171)
T 4gp7_A 12 VVLIGSSGSGKSTFAK 27 (171)
T ss_dssp EEEECCTTSCHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 4557999999997654
No 148
>4gl2_A Interferon-induced helicase C domain-containing P; MDA5, dsRNA, anti-viral signaling, RIG-I, MAVS, oligomerizat helicase, ATPase; HET: ANP; 3.56A {Homo sapiens}
Probab=58.76 E-value=2.8 Score=40.65 Aligned_cols=28 Identities=25% Similarity=0.342 Sum_probs=20.1
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
..++..+++|.+ ++..++||+|||.+..
T Consensus 13 ~~~i~~il~g~~--~ll~~~TGsGKTl~~~ 40 (699)
T 4gl2_A 13 MEVAQPALEGKN--IIICLPTGCGKTRVAV 40 (699)
T ss_dssp HHHHHHHHSSCC--EEECCCTTSCHHHHHH
T ss_pred HHHHHHHHhCCC--EEEEcCCCCcHHHHHH
Confidence 345566677877 4566899999998644
No 149
>4a2p_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.00A {Anas platyrhynchos} PDB: 4a36_A*
Probab=58.70 E-value=2.7 Score=39.23 Aligned_cols=25 Identities=40% Similarity=0.579 Sum_probs=18.2
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..++.|.+ ++..++||||||.+
T Consensus 14 ~~i~~~~~~~~--~l~~~~tGsGKT~~ 38 (556)
T 4a2p_A 14 ELAQPAINGKN--ALICAPTGSGKTFV 38 (556)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHHcCCC--EEEEcCCCChHHHH
Confidence 34556677877 45668999999965
No 150
>2r8r_A Sensor protein; KDPD, PFAM02702, MCSG, structural genomics, protein structure initiative, midwest center for structural genomics, kinase; 2.30A {Pseudomonas syringae PV}
Probab=58.66 E-value=1.9 Score=36.51 Aligned_cols=25 Identities=24% Similarity=0.295 Sum_probs=19.5
Q ss_pred hhhhhhcccCCCceEeehHHHHHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
..||..|..|+||||+|..+.....
T Consensus 7 l~I~~~~kgGvGKTt~a~~la~~l~ 31 (228)
T 2r8r_A 7 LKVFLGAAPGVGKTYAMLQAAHAQL 31 (228)
T ss_dssp EEEEEESSTTSSHHHHHHHHHHHHH
T ss_pred EEEEEECCCCCcHHHHHHHHHHHHH
Confidence 3478889999999999887655554
No 151
>2i4i_A ATP-dependent RNA helicase DDX3X; DEAD, structural genomics, SGC, structural GE consortium, hydrolase; HET: AMP; 2.20A {Homo sapiens}
Probab=58.31 E-value=2.5 Score=37.86 Aligned_cols=24 Identities=33% Similarity=0.354 Sum_probs=17.5
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.+..+++|.++ +..++||||||.+
T Consensus 45 ~i~~i~~~~~~--lv~a~TGsGKT~~ 68 (417)
T 2i4i_A 45 AIPIIKEKRDL--MACAQTGSGKTAA 68 (417)
T ss_dssp HHHHHHTTCCE--EEECCTTSCHHHH
T ss_pred HHHHHccCCCE--EEEcCCCCHHHHH
Confidence 34456677774 5668999999965
No 152
>2db3_A ATP-dependent RNA helicase VASA; DEAD-BOX, protein-RNA complex, ATPase, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.20A {Drosophila melanogaster}
Probab=58.06 E-value=2.5 Score=38.70 Aligned_cols=24 Identities=42% Similarity=0.530 Sum_probs=17.2
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.+..+++|.+ +++.++||||||..
T Consensus 86 ai~~i~~g~d--~i~~a~TGsGKT~a 109 (434)
T 2db3_A 86 SIPVISSGRD--LMACAQTGSGKTAA 109 (434)
T ss_dssp HHHHHHTTCC--EEEECCTTSSHHHH
T ss_pred HHHHHhcCCC--EEEECCCCCCchHH
Confidence 3444567766 46678999999965
No 153
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=57.96 E-value=2.6 Score=41.70 Aligned_cols=36 Identities=17% Similarity=0.251 Sum_probs=23.6
Q ss_pred hHHhHHhhhcchhhhhhhhcccCCCceEeehHHHHH
Q psy7226 48 LVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 48 ~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r 83 (279)
+..++..+..+....++-||++|+|||....++..+
T Consensus 189 i~~l~~~l~~~~~~~vLL~G~pGtGKT~la~~la~~ 224 (758)
T 3pxi_A 189 IQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQ 224 (758)
T ss_dssp HHHHHHHHHCSSSCEEEEESCTTTTTHHHHHHHHHH
T ss_pred HHHHHHHHhCCCCCCeEEECCCCCCHHHHHHHHHHH
Confidence 444554444455556788999999999765555433
No 154
>3b85_A Phosphate starvation-inducible protein; PHOH2, ATPase, PFAM: PF02562, ST genomics, PSI-2, protein structure initiative; 2.35A {Corynebacterium glutamicum atcc 13032}
Probab=57.43 E-value=1.7 Score=36.00 Aligned_cols=27 Identities=22% Similarity=0.357 Sum_probs=17.8
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEeeh
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++++.+-.|.-.+ -.|++|||||+.+-
T Consensus 14 ~~l~~i~~Ge~~~--liG~nGsGKSTLl~ 40 (208)
T 3b85_A 14 HYVDAIDTNTIVF--GLGPAGSGKTYLAM 40 (208)
T ss_dssp HHHHHHHHCSEEE--EECCTTSSTTHHHH
T ss_pred HHHHhccCCCEEE--EECCCCCCHHHHHH
Confidence 4556655555444 36999999996543
No 155
>2cvh_A DNA repair and recombination protein RADB; filament formation, homologous recombination, ATPase domain, hyperthermophIle; HET: DNA; 2.20A {Thermococcus kodakarensis} PDB: 2cvf_A*
Probab=57.18 E-value=1.6 Score=35.40 Aligned_cols=31 Identities=19% Similarity=0.325 Sum_probs=21.4
Q ss_pred HhHHhhhc-chh--hhhhhhcccCCCceEeehHH
Q psy7226 50 PLINHMFN-GIN--ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 50 plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~Gi 80 (279)
+-++.++. |.. ..+.-+|++|+|||..+.-+
T Consensus 7 ~~LD~~l~Ggi~~G~~~~i~G~~GsGKTtl~~~l 40 (220)
T 2cvh_A 7 KSLDSLLGGGFAPGVLTQVYGPYASGKTTLALQT 40 (220)
T ss_dssp HHHHHHTTSSBCTTSEEEEECSTTSSHHHHHHHH
T ss_pred HHHHHhhcCCCcCCEEEEEECCCCCCHHHHHHHH
Confidence 45666665 443 35677899999999765533
No 156
>3hu3_A Transitional endoplasmic reticulum ATPase; VCP, transport protein; HET: AGS; 2.20A {Homo sapiens} PDB: 3hu2_A* 3hu1_A* 1e32_A* 1s3s_A*
Probab=57.01 E-value=0.65 Score=43.92 Aligned_cols=19 Identities=37% Similarity=0.604 Sum_probs=15.1
Q ss_pred hhhhhhhcccCCCceEeeh
Q psy7226 60 NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~ 78 (279)
...|+-||++|+|||+.+.
T Consensus 238 ~~~vLL~GppGtGKT~lAr 256 (489)
T 3hu3_A 238 PRGILLYGPPGTGKTLIAR 256 (489)
T ss_dssp CCEEEEECSTTSSHHHHHH
T ss_pred CCcEEEECcCCCCHHHHHH
Confidence 3458899999999996543
No 157
>3a00_A Guanylate kinase, GMP kinase; domain movement, dimerization, acetylation, ATP-binding, nucleotide-binding, phosphoprotein, transferase; 1.80A {Saccharomyces cerevisiae} PDB: 1ex6_A* 1ex7_A 1gky_A* 2zzz_A 3sqk_A 4f4j_A 2zzy_A
Probab=56.72 E-value=1.6 Score=35.07 Aligned_cols=13 Identities=31% Similarity=0.529 Sum_probs=10.5
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-.|++|||||+++
T Consensus 6 l~GpsGaGKsTl~ 18 (186)
T 3a00_A 6 ISGPSGTGKSTLL 18 (186)
T ss_dssp EESSSSSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4599999999653
No 158
>3c8u_A Fructokinase; YP_612366.1, putative fructose transport system kinase, STRU genomics, joint center for structural genomics, JCSG; 1.95A {Silicibacter SP}
Probab=56.10 E-value=2.3 Score=34.64 Aligned_cols=16 Identities=25% Similarity=0.351 Sum_probs=12.0
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|++|||||+.+
T Consensus 24 ~v~I~G~sGsGKSTl~ 39 (208)
T 3c8u_A 24 LVALSGAPGSGKSTLS 39 (208)
T ss_dssp EEEEECCTTSCTHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4445699999999653
No 159
>3tr0_A Guanylate kinase, GMP kinase; purines, pyrimidines, nucleosides, nucleotides, transferase; HET: 5GP; 1.85A {Coxiella burnetii}
Probab=55.98 E-value=1.6 Score=35.10 Aligned_cols=15 Identities=33% Similarity=0.523 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|.-.|++|||||+.+
T Consensus 10 i~l~Gp~GsGKSTl~ 24 (205)
T 3tr0_A 10 FIISAPSGAGKTSLV 24 (205)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECcCCCCHHHHH
Confidence 334599999999653
No 160
>3lw7_A Adenylate kinase related protein (ADKA-like); AMP, PSI, MCSG, structural genomics, midwest center for structural genomics; HET: AMP; 2.30A {Sulfolobus solfataricus} PDB: 3h0k_A
Probab=55.66 E-value=1.7 Score=33.57 Aligned_cols=14 Identities=36% Similarity=0.553 Sum_probs=11.5
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|++|||||+.
T Consensus 4 I~l~G~~GsGKsT~ 17 (179)
T 3lw7_A 4 ILITGMPGSGKSEF 17 (179)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 55679999999964
No 161
>2oca_A DAR protein, ATP-dependent DNA helicase UVSW; ATP-dependant helicase, T4-bacteriophage, recombination, hydrolase; 2.70A {Enterobacteria phage T4}
Probab=55.61 E-value=3.1 Score=38.70 Aligned_cols=30 Identities=7% Similarity=0.008 Sum_probs=19.9
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEeehHHH
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii 81 (279)
..+..++.|.+ ++..|+||||||.+..-++
T Consensus 120 ~ai~~~~~~~~--~ll~~~tGsGKT~~~~~~~ 149 (510)
T 2oca_A 120 DAVFEGLVNRR--RILNLPTSAGRSLIQALLA 149 (510)
T ss_dssp HHHHHHHHHSE--EEEECCSTTTHHHHHHHHH
T ss_pred HHHHHHHhcCC--cEEEeCCCCCHHHHHHHHH
Confidence 34455566654 3567999999998765333
No 162
>1um8_A ATP-dependent CLP protease ATP-binding subunit CL; CLPP binding loop, chaperone; HET: ADP; 2.60A {Helicobacter pylori} SCOP: c.37.1.20
Probab=55.45 E-value=1.4 Score=39.48 Aligned_cols=18 Identities=39% Similarity=0.637 Sum_probs=14.7
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..|+-||++|+|||+.+.
T Consensus 73 ~~ill~Gp~GtGKT~la~ 90 (376)
T 1um8_A 73 SNILLIGPTGSGKTLMAQ 90 (376)
T ss_dssp CCEEEECCTTSSHHHHHH
T ss_pred CCEEEECCCCCCHHHHHH
Confidence 458889999999997643
No 163
>1ojl_A Transcriptional regulatory protein ZRAR; response regulator, two component system, AAA domain, NTRC family, DNA-binding; HET: ATP; 3.0A {Salmonella typhimurium}
Probab=55.45 E-value=2.6 Score=36.84 Aligned_cols=19 Identities=37% Similarity=0.539 Sum_probs=15.5
Q ss_pred chhhhhhhhcccCCCceEe
Q psy7226 58 GINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 58 G~n~~i~aYG~tgSGKTyT 76 (279)
.....|+-||++|+|||+.
T Consensus 23 ~~~~~vLi~Ge~GtGKt~l 41 (304)
T 1ojl_A 23 PSDATVLIHGDSGTGKELV 41 (304)
T ss_dssp STTSCEEEESCTTSCHHHH
T ss_pred CCCCcEEEECCCCchHHHH
Confidence 4466788999999999954
No 164
>3tbk_A RIG-I helicase domain; DECH helicase, ATP binding, hydrolase; HET: ANP; 2.14A {Mus musculus}
Probab=55.10 E-value=3.3 Score=38.43 Aligned_cols=24 Identities=33% Similarity=0.433 Sum_probs=17.7
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.+..++.|.++ +..++||||||.+
T Consensus 12 ~i~~~~~~~~~--l~~~~tGsGKT~~ 35 (555)
T 3tbk_A 12 LALPAKKGKNT--IICAPTGCGKTFV 35 (555)
T ss_dssp HHHHHHTTCCE--EEECCTTSCHHHH
T ss_pred HHHHHhCCCCE--EEEeCCCChHHHH
Confidence 45556678764 5568999999965
No 165
>1hv8_A Putative ATP-dependent RNA helicase MJ0669; RNA-binding protein, ATPase, RNA binding protein; 3.00A {Methanocaldococcus jannaschii} SCOP: c.37.1.19 c.37.1.19
Probab=54.43 E-value=2.9 Score=36.46 Aligned_cols=26 Identities=31% Similarity=0.455 Sum_probs=17.2
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
.+..+++|.. .++..++||||||.+.
T Consensus 36 ~i~~~~~~~~-~~l~~~~TGsGKT~~~ 61 (367)
T 1hv8_A 36 VIPLFLNDEY-NIVAQARTGSGKTASF 61 (367)
T ss_dssp HHHHHHHTCS-EEEEECCSSSSHHHHH
T ss_pred HHHHHhCCCC-CEEEECCCCChHHHHH
Confidence 4455566632 2456689999999763
No 166
>1lvg_A Guanylate kinase, GMP kinase; transferase; HET: ADP 5GP; 2.10A {Mus musculus} SCOP: c.37.1.1
Probab=54.00 E-value=1.8 Score=35.19 Aligned_cols=16 Identities=25% Similarity=0.532 Sum_probs=11.9
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
+.-.|++|||||+.+-
T Consensus 7 i~lvGpsGaGKSTLl~ 22 (198)
T 1lvg_A 7 VVLSGPSGAGKSTLLK 22 (198)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 3456999999996543
No 167
>4ag6_A VIRB4 ATPase, type IV secretory pathway VIRB4 components-like P; hydrolase, type IV secretion, conjugation; 2.35A {Thermoanaerobacter pseudethanolicus} PDB: 4ag5_A
Probab=53.99 E-value=2.3 Score=38.48 Aligned_cols=21 Identities=19% Similarity=0.570 Sum_probs=15.7
Q ss_pred hhhhcccCCCceEeehHHHHH
Q psy7226 63 LLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~Gii~r 83 (279)
++..|++|||||+++.-++.+
T Consensus 38 ~~i~G~~G~GKs~~~~~~~~~ 58 (392)
T 4ag6_A 38 WTILAKPGAGKSFTAKMLLLR 58 (392)
T ss_dssp EEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHHHHH
Confidence 456699999999887655443
No 168
>1wp9_A ATP-dependent RNA helicase, putative; ATPase, DNA replication, DNA repair, DNA recombina hydrolase; 2.90A {Pyrococcus furiosus} SCOP: c.37.1.19 c.37.1.19
Probab=53.65 E-value=3.9 Score=36.80 Aligned_cols=28 Identities=21% Similarity=0.116 Sum_probs=19.0
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
..+..++.| .++..++||+|||.++.-+
T Consensus 16 ~~i~~~~~~---~~ll~~~tG~GKT~~~~~~ 43 (494)
T 1wp9_A 16 VIYAKCKET---NCLIVLPTGLGKTLIAMMI 43 (494)
T ss_dssp HHHHHGGGS---CEEEECCTTSCHHHHHHHH
T ss_pred HHHHHHhhC---CEEEEcCCCCCHHHHHHHH
Confidence 345566677 3455689999999875533
No 169
>1xti_A Probable ATP-dependent RNA helicase P47; alpha-beta fold, gene regulation; 1.95A {Homo sapiens} SCOP: c.37.1.19 c.37.1.19 PDB: 1xtj_A* 1xtk_A
Probab=53.56 E-value=3.3 Score=36.57 Aligned_cols=25 Identities=28% Similarity=0.430 Sum_probs=17.9
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..++.|.+ ++..++||+|||.+
T Consensus 37 ~~i~~~~~~~~--~lv~a~TGsGKT~~ 61 (391)
T 1xti_A 37 ECIPQAILGMD--VLCQAKSGMGKTAV 61 (391)
T ss_dssp HHHHHHTTTCC--EEEECSSCSSHHHH
T ss_pred HHHHHHhcCCc--EEEECCCCCcHHHH
Confidence 44556677766 45567999999965
No 170
>4a74_A DNA repair and recombination protein RADA; hydrolase, recombinase; HET: DNA ANP; 1.48A {Pyrococcus furiosus} PDB: 4a6x_A* 4a6p_A* 4a7o_A*
Probab=53.54 E-value=1.8 Score=35.29 Aligned_cols=30 Identities=27% Similarity=0.488 Sum_probs=19.8
Q ss_pred HHhHHhhhc-chh--hhhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFN-GIN--ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~ 78 (279)
-+-+|.++. |.. -.+.-.|++|||||..+.
T Consensus 11 ~~~LD~~l~ggi~~G~~~~l~G~nGsGKSTll~ 43 (231)
T 4a74_A 11 SKSLDKLLGGGIETQAITEVFGEFGSGKTQLAH 43 (231)
T ss_dssp CHHHHHHTTSSEESSEEEEEEESTTSSHHHHHH
T ss_pred ChhHHhHhcCCCCCCcEEEEECCCCCCHHHHHH
Confidence 355666663 332 345567999999997654
No 171
>2v1x_A ATP-dependent DNA helicase Q1; DNA strand annealing, mismatch repair, nucleotide-binding, DNA-binding, polymorphism, nuclear protein, ATPase; HET: ADP; 2.00A {Homo sapiens} PDB: 2wwy_A*
Probab=53.47 E-value=3.5 Score=39.74 Aligned_cols=26 Identities=31% Similarity=0.465 Sum_probs=19.6
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+|..+++|.+ +++..+||+|||.+
T Consensus 50 ~~~i~~il~g~d--~lv~~pTGsGKTl~ 75 (591)
T 2v1x_A 50 LETINVTMAGKE--VFLVMPTGGGKSLC 75 (591)
T ss_dssp HHHHHHHHTTCC--EEEECCTTSCTTHH
T ss_pred HHHHHHHHcCCC--EEEEECCCChHHHH
Confidence 445666778887 46678999999964
No 172
>1rz3_A Hypothetical protein rbstp0775; MCSG, structural genomics, PSI, protein structure initiative; 1.90A {Geobacillus stearothermophilus} SCOP: c.37.1.6
Probab=53.18 E-value=2.3 Score=34.58 Aligned_cols=29 Identities=21% Similarity=0.084 Sum_probs=17.9
Q ss_pred HHhHHhhhc---chhhhhhhhcccCCCceEee
Q psy7226 49 VPLINHMFN---GINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 49 ~plv~~~l~---G~n~~i~aYG~tgSGKTyTm 77 (279)
..+++.+.. .....|.-.|++|||||+.+
T Consensus 8 ~~l~~~~~~~~~~~~~~i~i~G~~GsGKstl~ 39 (201)
T 1rz3_A 8 DFLCKTILAIKTAGRLVLGIDGLSRSGKTTLA 39 (201)
T ss_dssp HHHHHHHHTSCCSSSEEEEEEECTTSSHHHHH
T ss_pred HHHHHHHHHhccCCCeEEEEECCCCCCHHHHH
Confidence 444444442 22335667799999999653
No 173
>1kgd_A CASK, peripheral plasma membrane CASK; maguk, guanylate kinase like domain, protein binding; 1.31A {Homo sapiens} SCOP: c.37.1.1
Probab=53.11 E-value=1.9 Score=34.36 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=10.9
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
+.-.|++|||||+.
T Consensus 8 i~i~GpsGsGKSTL 21 (180)
T 1kgd_A 8 LVLLGAHGVGRRHI 21 (180)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 34559999999954
No 174
>3i5x_A ATP-dependent RNA helicase MSS116; protein-RNA complex, RNA helicase, DEAD-BOX, ATP-binding, HE hydrolase, mitochondrion; HET: ANP; 1.90A {Saccharomyces cerevisiae} PDB: 3i5y_A* 3i61_A* 3i62_A* 3sqx_A* 4db2_A 4db4_A
Probab=53.00 E-value=3.1 Score=39.27 Aligned_cols=26 Identities=27% Similarity=0.515 Sum_probs=17.2
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
++..++.|.+-.++..++||||||.+
T Consensus 102 ~i~~~l~~~~~~~lv~apTGsGKTl~ 127 (563)
T 3i5x_A 102 TIKPILSSEDHDVIARAKTGTGKTFA 127 (563)
T ss_dssp HHHHHHSSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHhcCCCCeEEEECCCCCCccHH
Confidence 44455643333457778999999975
No 175
>2xzl_A ATP-dependent helicase NAM7; hydrolase-RNA complex, NMD, RNA degradation, allosteric REGU; HET: ADP 1PE; 2.40A {Saccharomyces cerevisiae}
Probab=53.00 E-value=3.4 Score=41.42 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=16.9
Q ss_pred hhhhcccCCCceEeehHHHHHH
Q psy7226 63 LLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
++..|+.|||||+|+..++...
T Consensus 378 ~lI~GppGTGKT~~i~~~i~~l 399 (802)
T 2xzl_A 378 SLIQGPPGTGKTVTSATIVYHL 399 (802)
T ss_dssp EEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHH
Confidence 4667999999999987655433
No 176
>2fwr_A DNA repair protein RAD25; DNA unwinding, XPB, DNA binding protein; HET: DNA; 2.60A {Archaeoglobus fulgidus} SCOP: c.37.1.19 c.37.1.19 PDB: 2fzl_A*
Probab=52.44 E-value=3.5 Score=37.92 Aligned_cols=28 Identities=18% Similarity=0.045 Sum_probs=19.4
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
...+..++.+.+ ++..++||+|||.+..
T Consensus 99 ~~ai~~i~~~~~--~ll~~~TGsGKT~~~l 126 (472)
T 2fwr_A 99 EKALERWLVDKR--GCIVLPTGSGKTHVAM 126 (472)
T ss_dssp HHHHHHHTTTTE--EEEECCTTSCHHHHHH
T ss_pred HHHHHHHHhcCC--EEEEeCCCCCHHHHHH
Confidence 344555666655 5566899999998743
No 177
>1jr3_A DNA polymerase III subunit gamma; processivity, processivity clamp, clamp loader, AAA+ ATPase, transferase; HET: DNA; 2.70A {Escherichia coli} SCOP: a.80.1.1 c.37.1.20 PDB: 1xxh_B* 3glh_B* 3glf_B* 3gli_B* 3glg_B* 1xxi_B*
Probab=52.30 E-value=2.4 Score=37.46 Aligned_cols=18 Identities=33% Similarity=0.353 Sum_probs=14.5
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..++-||+.|+|||+++.
T Consensus 39 ~~~ll~G~~G~GKT~la~ 56 (373)
T 1jr3_A 39 HAYLFSGTRGVGKTSIAR 56 (373)
T ss_dssp SEEEEESCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 357889999999997654
No 178
>1fuu_A Yeast initiation factor 4A; IF4A, helicase, DEAD-box protein, translation; 2.50A {Saccharomyces cerevisiae} SCOP: c.37.1.19 PDB: 2vso_A* 2vsx_A*
Probab=51.96 E-value=2.5 Score=37.44 Aligned_cols=25 Identities=40% Similarity=0.473 Sum_probs=18.1
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..++.|.++ +..++||||||.+
T Consensus 50 ~~i~~i~~~~~~--lv~~~TGsGKT~~ 74 (394)
T 1fuu_A 50 RAIMPIIEGHDV--LAQAQSGTGKTGT 74 (394)
T ss_dssp HHHHHHHHTCCE--EECCCSSHHHHHH
T ss_pred HHHHHHhCCCCE--EEECCCCChHHHH
Confidence 345556677764 5668999999976
No 179
>2iut_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- cell division, DNA translocation, KOPS, membrane; HET: DNA SAP; 2.25A {Pseudomonas aeruginosa} PDB: 2iuu_A*
Probab=51.46 E-value=2.9 Score=40.35 Aligned_cols=25 Identities=44% Similarity=0.683 Sum_probs=19.0
Q ss_pred hhhhhhcccCCCceEeehHHHHHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
.-++..|.||||||..+..||...+
T Consensus 215 pHlLIaG~TGSGKS~~L~tlI~sLl 239 (574)
T 2iut_A 215 PHLLVAGTTGSGKSVGVNAMLLSIL 239 (574)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHH
T ss_pred CeeEEECCCCCCHHHHHHHHHHHHH
Confidence 3457789999999998877665443
No 180
>4etp_B Spindle POLE BODY-associated protein VIK1; kinesin motor protein, kinesin motor homology domain, karyog mitosis, microtubules; HET: ADP EBC; 2.30A {Saccharomyces cerevisiae}
Probab=51.24 E-value=2 Score=38.10 Aligned_cols=89 Identities=12% Similarity=0.226 Sum_probs=58.2
Q ss_pred EeeceeEeeecccCCCCCC-cceehhhhHHhHHhhh-cchhhhhhhhcccCCCceEeehHHHHHHHHHHHHH----cCcc
Q psy7226 22 FFDHQVFIFDNIFGPNDSN-ETIFTEVLVPLINHMF-NGINATLLAYGQTGGGKTYTVSAMIMKTLQHVMQR----CNKD 95 (279)
Q Consensus 22 ~~~~~~f~FD~Vf~~~a~Q-~~vf~~~~~plv~~~l-~G~n~~i~aYG~tgSGKTyTm~Gii~r~l~~lf~~----~~~~ 95 (279)
..+++.|.|++|++...-+ .+++..-++..++-++ .+.|+.|+.-|..--. -+---.+..+... ...|
T Consensus 88 ~~~~~~y~FnRiIp~~~~~e~~~l~qE~q~y~DmcL~~~~NfslIsis~~~w~------~Lr~~lL~fi~~k~~~Y~~~y 161 (333)
T 4etp_B 88 GLSEHVYKFNRVIPHLKVSEDCFFTQEYSVYHDMALNQKKNFNLISLSTTPHG------SLRESLIKFLAEKDTIYQKQY 161 (333)
T ss_dssp --CCCEEECSEEEETTTCCHHHHHHHTTHHHHHHHHHTTCCEEEEEEESSCCC------HHHHHHHHHHHSTTCHHHHHE
T ss_pred cCCcceEEEeeeechhhcchHHHHHHHHHHHHHHHHccCCCeeEEEecCCCcH------HHHHHHHHHHHhcccccccce
Confidence 4568999999999877632 3344444699999999 7999999998865211 1222233334433 2336
Q ss_pred chhhhHHHHhhhh-hhhhcCCC
Q psy7226 96 DVYMSYLQLYSEK-CYDLLNGN 116 (279)
Q Consensus 96 ~v~vS~~EIy~E~-v~DLL~~~ 116 (279)
.+++.|+.+.++. ..|||.+.
T Consensus 162 ~i~lQ~V~Lse~~~S~DlL~~~ 183 (333)
T 4etp_B 162 VITLQFVFLSDDEFSQDMLLDY 183 (333)
T ss_dssp EEEEEEEECCSSSCCEESSCC-
T ss_pred EEEEEEEEEcCCCchhhhhccc
Confidence 7888887776665 68999854
No 181
>3tau_A Guanylate kinase, GMP kinase; structural genomics, center for structural genomics of infec diseases, csgid, putative guanylate kinase; HET: MSE; 2.05A {Listeria monocytogenes}
Probab=51.19 E-value=1.8 Score=35.51 Aligned_cols=16 Identities=25% Similarity=0.339 Sum_probs=12.0
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|++|||||+++
T Consensus 10 ~i~l~GpsGsGKsTl~ 25 (208)
T 3tau_A 10 LIVLSGPSGVGKGTVR 25 (208)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECcCCCCHHHHH
Confidence 3455699999999653
No 182
>2wjy_A Regulator of nonsense transcripts 1; nonsense mediated decay, zinc-finger, ATP-binding, metal-BIN UPF2, UPF1, helicase, hydrolase; 2.50A {Homo sapiens} PDB: 2wjv_A 2iyk_A
Probab=51.16 E-value=3.6 Score=41.24 Aligned_cols=21 Identities=33% Similarity=0.506 Sum_probs=16.4
Q ss_pred hhhhcccCCCceEeehHHHHH
Q psy7226 63 LLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~Gii~r 83 (279)
.+..|+.|||||+|+..++..
T Consensus 374 ~lI~GppGTGKT~ti~~~i~~ 394 (800)
T 2wjy_A 374 SLIQGPPGTGKTVTSATIVYH 394 (800)
T ss_dssp EEEECCTTSCHHHHHHHHHHH
T ss_pred EEEEcCCCCCHHHHHHHHHHH
Confidence 456799999999998765543
No 183
>1ly1_A Polynucleotide kinase; PNK, phosphatase, transferase; 2.00A {Enterobacteria phage T4} SCOP: c.37.1.1
Probab=50.82 E-value=2.3 Score=33.25 Aligned_cols=15 Identities=33% Similarity=0.519 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 4 ~I~i~G~~GsGKST~ 18 (181)
T 1ly1_A 4 IILTIGCPGSGKSTW 18 (181)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEecCCCCCHHHH
Confidence 356779999999964
No 184
>3hws_A ATP-dependent CLP protease ATP-binding subunit CL; CLPXP, AAA+ molecular machine, hexamer, asymmetric,, ATP-BIN chaperone, metal-binding; HET: ADP; 3.25A {Escherichia coli} PDB: 3hte_A
Probab=50.70 E-value=2.4 Score=37.87 Aligned_cols=17 Identities=41% Similarity=0.657 Sum_probs=14.1
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..|+-||++|+|||+..
T Consensus 52 ~~vll~GppGtGKT~la 68 (363)
T 3hws_A 52 SNILLIGPTGSGKTLLA 68 (363)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CeEEEECCCCCCHHHHH
Confidence 46788999999999754
No 185
>1qhx_A CPT, protein (chloramphenicol phosphotransferase); kinase, antibiotic resistance, phosphorylation, mononucleoti binding fold; HET: ATP; 2.50A {Streptomyces venezuelae} SCOP: c.37.1.3 PDB: 1grr_A* 1grq_A 1qhs_A* 1qhn_A* 1qhy_A*
Probab=50.09 E-value=2.4 Score=33.27 Aligned_cols=15 Identities=20% Similarity=0.381 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|.+|||||+.
T Consensus 5 ~i~l~G~~GsGKST~ 19 (178)
T 1qhx_A 5 MIILNGGSSAGKSGI 19 (178)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 467789999999953
No 186
>2p5t_B PEZT; postsegregational killing system, phosphoryltransferase, HEL helix motif, transcription regulator; 3.20A {Streptococcus pneumoniae}
Probab=49.77 E-value=1.7 Score=36.81 Aligned_cols=16 Identities=44% Similarity=0.607 Sum_probs=13.0
Q ss_pred hhhhhhcccCCCceEe
Q psy7226 61 ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyT 76 (279)
..|+..|++|||||+.
T Consensus 33 ~~i~l~G~~GsGKSTl 48 (253)
T 2p5t_B 33 IAILLGGQSGAGKTTI 48 (253)
T ss_dssp EEEEEESCGGGTTHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 3577889999999954
No 187
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=49.47 E-value=3.6 Score=33.02 Aligned_cols=19 Identities=21% Similarity=0.235 Sum_probs=13.5
Q ss_pred hhhcccCCCceEeehHHHH
Q psy7226 64 LAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~Gii~ 82 (279)
.-.|.+|||||..+..|+.
T Consensus 8 ~i~G~sGsGKTTl~~~L~~ 26 (169)
T 1xjc_A 8 QVVGYKHSGKTTLMEKWVA 26 (169)
T ss_dssp EEECCTTSSHHHHHHHHHH
T ss_pred EEECCCCCCHHHHHHHHHH
Confidence 3458999999976555544
No 188
>2z83_A Helicase/nucleoside triphosphatase; hydrolase, membrane, nucleotide-binding, RNA replication, transmembrane, viral protein; 1.80A {Japanese encephalitis virus} PDB: 2v8o_A 2qeq_A
Probab=49.45 E-value=3.9 Score=37.93 Aligned_cols=19 Identities=26% Similarity=0.343 Sum_probs=13.7
Q ss_pred hhhhcccCCCceEe-ehHHH
Q psy7226 63 LLAYGQTGGGKTYT-VSAMI 81 (279)
Q Consensus 63 i~aYG~tgSGKTyT-m~Gii 81 (279)
++..++||||||.. +..++
T Consensus 24 vlv~a~TGsGKT~~~~l~il 43 (459)
T 2z83_A 24 TVLDLHPGSGKTRKILPQII 43 (459)
T ss_dssp EEECCCTTSCTTTTHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHH
Confidence 45668999999987 33443
No 189
>1zp6_A Hypothetical protein ATU3015; alpha-beta protein., structural genomics, PSI, protein struc initiative; 3.20A {Agrobacterium tumefaciens str} SCOP: c.37.1.25
Probab=49.30 E-value=1.8 Score=34.40 Aligned_cols=16 Identities=38% Similarity=0.586 Sum_probs=12.4
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|++|||||+.+
T Consensus 11 ~i~l~G~~GsGKSTl~ 26 (191)
T 1zp6_A 11 ILLLSGHPGSGKSTIA 26 (191)
T ss_dssp EEEEEECTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3556799999999653
No 190
>4a4z_A Antiviral helicase SKI2; hydrolase, ATPase, mRNA degradation, exosome; HET: ANP; 2.40A {Saccharomyces cerevisiae} PDB: 4a4k_A
Probab=49.21 E-value=4.6 Score=41.51 Aligned_cols=25 Identities=24% Similarity=0.365 Sum_probs=18.8
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..|..+++|.+ ++..++||||||.+
T Consensus 46 ~aI~~il~g~~--vlv~apTGsGKTlv 70 (997)
T 4a4z_A 46 EAVYHLEQGDS--VFVAAHTSAGKTVV 70 (997)
T ss_dssp HHHHHHHTTCE--EEEECCTTSCSHHH
T ss_pred HHHHHHHcCCC--EEEEECCCCcHHHH
Confidence 45566677765 56789999999964
No 191
>3lnc_A Guanylate kinase, GMP kinase; ALS collaborative crystallography, emerald biostructures, ATP-binding, cytoplasm, nucleotide-binding; HET: 5GP; 1.95A {Anaplasma phagocytophilum}
Probab=48.96 E-value=2.9 Score=34.55 Aligned_cols=14 Identities=29% Similarity=0.370 Sum_probs=7.1
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 31 ~l~Gp~GsGKSTl~ 44 (231)
T 3lnc_A 31 VLSSPSGCGKTTVA 44 (231)
T ss_dssp EEECSCC----CHH
T ss_pred EEECCCCCCHHHHH
Confidence 34699999999664
No 192
>3fho_A ATP-dependent RNA helicase DBP5; mRNA export, ATPase, translation termination, binding, hydrolase, membrane, mRNA transport; 2.80A {Schizosaccharomyces pombe}
Probab=48.92 E-value=3.5 Score=38.70 Aligned_cols=25 Identities=20% Similarity=0.371 Sum_probs=17.4
Q ss_pred HHhhhcchhhhhhhhcccCCCceEe
Q psy7226 52 INHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 52 v~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
+..+++|.+-.++..++||||||.+
T Consensus 150 i~~i~~~~~~~~ll~apTGsGKT~~ 174 (508)
T 3fho_A 150 LPLLLSNPPRNMIGQSQSGTGKTAA 174 (508)
T ss_dssp HHHHHCSSCCCEEEECCSSTTSHHH
T ss_pred HHHHHcCCCCCEEEECCCCccHHHH
Confidence 3445666334457779999999986
No 193
>2ykg_A Probable ATP-dependent RNA helicase DDX58; hydrolase, innate immunity; 2.50A {Homo sapiens} PDB: 3tmi_A*
Probab=48.80 E-value=4.4 Score=39.26 Aligned_cols=25 Identities=32% Similarity=0.474 Sum_probs=18.3
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.++..++.|.|+ +..++||||||..
T Consensus 20 ~~i~~~l~g~~~--iv~~~TGsGKTl~ 44 (696)
T 2ykg_A 20 ELALPAMKGKNT--IICAPTGCGKTFV 44 (696)
T ss_dssp HHHHHHHTTCCE--EEECCTTSSHHHH
T ss_pred HHHHHHHcCCCE--EEEcCCCchHHHH
Confidence 345556778774 5668999999974
No 194
>1znw_A Guanylate kinase, GMP kinase; ATP:GMP-phosphotransferase, TR; 2.10A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1znx_A* 1zny_A* 1znz_A* 1s4q_A 1z8f_A
Probab=48.29 E-value=2.5 Score=34.39 Aligned_cols=13 Identities=31% Similarity=0.381 Sum_probs=10.5
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-.|++|||||..+
T Consensus 25 l~GpnGsGKSTLl 37 (207)
T 1znw_A 25 LSGPSAVGKSTVV 37 (207)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4599999999654
No 195
>3trf_A Shikimate kinase, SK; amino acid biosynthesis, transferase; 2.60A {Coxiella burnetii}
Probab=48.28 E-value=2.6 Score=33.28 Aligned_cols=15 Identities=33% Similarity=0.519 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|.+|||||+.
T Consensus 7 ~i~l~G~~GsGKst~ 21 (185)
T 3trf_A 7 NIYLIGLMGAGKTSV 21 (185)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 366779999999964
No 196
>1ye8_A Protein THEP1, hypothetical UPF0334 kinase-like protein AQ_1292; mixed alpha-beta protein, rossman fold, signaling protein, transferase; 1.40A {Aquifex aeolicus} SCOP: c.37.1.11
Probab=48.02 E-value=2.6 Score=33.90 Aligned_cols=13 Identities=46% Similarity=0.552 Sum_probs=10.7
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-.|++|||||+.+
T Consensus 5 l~G~nGsGKTTLl 17 (178)
T 1ye8_A 5 ITGEPGVGKTTLV 17 (178)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4699999999654
No 197
>3iij_A Coilin-interacting nuclear ATPase protein; alpha and beta proteins (A/B), protein binding, transferase, phosphotransferase; HET: ADP; 1.76A {Homo sapiens} SCOP: c.37.1.1 PDB: 3iik_A 3iil_A* 3iim_A* 1rkb_A
Probab=47.41 E-value=2.8 Score=33.10 Aligned_cols=15 Identities=40% Similarity=0.519 Sum_probs=12.4
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+..|.+|||||+.
T Consensus 13 ~i~i~G~~GsGKst~ 27 (180)
T 3iij_A 13 NILLTGTPGVGKTTL 27 (180)
T ss_dssp CEEEECSTTSSHHHH
T ss_pred eEEEEeCCCCCHHHH
Confidence 467789999999964
No 198
>3lfu_A DNA helicase II; SF1 helicase, ATP-binding, DNA damage, DNA REP replication, DNA-binding, hydrolase, nucleotide-B SOS response; HET: DNA; 1.80A {Escherichia coli} PDB: 2is6_A* 2is2_A* 2is1_A* 2is4_A*
Probab=47.03 E-value=4.2 Score=39.06 Aligned_cols=19 Identities=32% Similarity=0.499 Sum_probs=15.3
Q ss_pred hhhhhhhcccCCCceEeeh
Q psy7226 60 NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~ 78 (279)
+..++..|..|||||+|+.
T Consensus 22 ~~~~lV~a~aGsGKT~~l~ 40 (647)
T 3lfu_A 22 RSNLLVLAGAGSGKTRVLV 40 (647)
T ss_dssp SSCEEEEECTTSCHHHHHH
T ss_pred CCCEEEEECCCCCHHHHHH
Confidence 4456777899999999965
No 199
>2ga8_A Hypothetical 39.9 kDa protein; YFR007W, YFH7, unknown function; HET: CME; 1.77A {Saccharomyces cerevisiae} PDB: 2gaa_A*
Probab=46.88 E-value=7.5 Score=35.17 Aligned_cols=22 Identities=18% Similarity=0.412 Sum_probs=16.6
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
.|.-..|+-.|+.|+|||+...
T Consensus 21 ~g~~~~i~l~G~~G~GKTTl~~ 42 (359)
T 2ga8_A 21 DNYRVCVILVGSPGSGKSTIAE 42 (359)
T ss_dssp TCSCEEEEEECCTTSSHHHHHH
T ss_pred cCCeeEEEEECCCCCcHHHHHH
Confidence 4555557789999999996654
No 200
>2gza_A Type IV secretion system protein VIRB11; ATPase, hydrolase; 2.60A {Brucella suis}
Probab=46.74 E-value=2.8 Score=37.69 Aligned_cols=15 Identities=40% Similarity=0.629 Sum_probs=11.3
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|+||||||+++-
T Consensus 179 ~ivG~sGsGKSTll~ 193 (361)
T 2gza_A 179 VVAGETGSGKTTLMK 193 (361)
T ss_dssp EEEESSSSCHHHHHH
T ss_pred EEECCCCCCHHHHHH
Confidence 344999999996643
No 201
>2whx_A Serine protease/ntpase/helicase NS3; transcription, hydrolase, ATP-binding, reticulum, nucleotidyltransferase, multifunctional enzyme; HET: ADP; 2.20A {Dengue virus 4} PDB: 2vbc_A 2wzq_A
Probab=46.53 E-value=4.9 Score=38.95 Aligned_cols=23 Identities=17% Similarity=0.059 Sum_probs=18.0
Q ss_pred HHhhhcchhhhhhhhcccCCCceEe
Q psy7226 52 INHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 52 v~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
+..++.|.++ +..++||||||..
T Consensus 180 i~~l~~g~dv--lv~a~TGSGKT~~ 202 (618)
T 2whx_A 180 EDIFRKKRLT--IMDLHPGAGKTKR 202 (618)
T ss_dssp GGGGSTTCEE--EECCCTTSSTTTT
T ss_pred HHHHhcCCeE--EEEcCCCCCHHHH
Confidence 5566778775 5668999999987
No 202
>1z6g_A Guanylate kinase; structural genomics, SGC, structural genom consortium, transferase; HET: EPE; 2.18A {Plasmodium falciparum}
Probab=46.41 E-value=2.8 Score=34.61 Aligned_cols=14 Identities=29% Similarity=0.484 Sum_probs=10.8
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 27 ~lvGpsGsGKSTLl 40 (218)
T 1z6g_A 27 VICGPSGVGKGTLI 40 (218)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999653
No 203
>3b9q_A Chloroplast SRP receptor homolog, alpha subunit CPFTSY; protein translocation, GTP-binding, nucleotide-binding, protein transport; 1.75A {Arabidopsis thaliana}
Probab=46.29 E-value=3 Score=36.64 Aligned_cols=17 Identities=35% Similarity=0.718 Sum_probs=13.4
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.+.-.|++|||||+++.
T Consensus 102 vi~lvG~nGsGKTTll~ 118 (302)
T 3b9q_A 102 VIMIVGVNGGGKTTSLG 118 (302)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEEcCCCCCHHHHHH
Confidence 45567999999997754
No 204
>1rj9_A FTSY, signal recognition protein; SRP-GTPase domain, heterodimer, nucleotide twinning, protein complex, protein transport; HET: GCP; 1.90A {Thermus aquaticus} SCOP: a.24.13.1 c.37.1.10 PDB: 2q9c_A* 2q9b_A* 2q9a_A* 1okk_D* 2xkv_D 2iyl_D* 2cnw_D* 2j7p_D*
Probab=46.22 E-value=3 Score=36.72 Aligned_cols=17 Identities=41% Similarity=0.604 Sum_probs=13.1
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|.-.|++|||||+++.
T Consensus 104 vi~lvG~nGsGKTTll~ 120 (304)
T 1rj9_A 104 VVLVVGVNGVGKTTTIA 120 (304)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 44556999999997754
No 205
>3e1s_A Exodeoxyribonuclease V, subunit RECD; alpha and beta protein, ATP-binding, nucleotide-binding, HYD; 2.20A {Deinococcus radiodurans} PDB: 3gp8_A 3gpl_A*
Probab=46.08 E-value=5.3 Score=38.41 Aligned_cols=32 Identities=19% Similarity=0.314 Sum_probs=21.0
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeehHHHH
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
...+..++.+ ..++-.|+.|||||+++..++-
T Consensus 195 ~~Av~~~~~~--~~~~I~G~pGTGKTt~i~~l~~ 226 (574)
T 3e1s_A 195 ASVLDQLAGH--RLVVLTGGPGTGKSTTTKAVAD 226 (574)
T ss_dssp HHHHHHHTTC--SEEEEECCTTSCHHHHHHHHHH
T ss_pred HHHHHHHHhC--CEEEEEcCCCCCHHHHHHHHHH
Confidence 3444555543 3445679999999998766543
No 206
>1f2t_A RAD50 ABC-ATPase; DNA double-strand break repair, replication; 1.60A {Pyrococcus furiosus} SCOP: c.37.1.12 PDB: 1f2u_A* 1us8_A*
Probab=46.03 E-value=3.3 Score=32.19 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=11.6
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
+-+|++|||||..+.
T Consensus 27 ~I~G~NGsGKStil~ 41 (149)
T 1f2t_A 27 LIIGQNGSGKSSLLD 41 (149)
T ss_dssp EEECCTTSSHHHHHH
T ss_pred EEECCCCCCHHHHHH
Confidence 457999999995533
No 207
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=45.84 E-value=2.8 Score=42.00 Aligned_cols=17 Identities=41% Similarity=0.704 Sum_probs=14.1
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|+-||++|+|||+.+.
T Consensus 240 ~vLL~Gp~GtGKTtLar 256 (806)
T 1ypw_A 240 GILLYGPPGTGKTLIAR 256 (806)
T ss_dssp EEEECSCTTSSHHHHHH
T ss_pred eEEEECcCCCCHHHHHH
Confidence 57889999999997643
No 208
>3nbx_X ATPase RAVA; AAA+ ATPase, alpha-beta-alpha structure, rossman fold, hydro; HET: ADP; 2.91A {Escherichia coli}
Probab=45.84 E-value=4.5 Score=38.22 Aligned_cols=27 Identities=15% Similarity=0.208 Sum_probs=18.1
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
.-++..+..|. .|+-||++|+|||+.+
T Consensus 32 ~~l~~al~~~~--~VLL~GpPGtGKT~LA 58 (500)
T 3nbx_X 32 RLCLLAALSGE--SVFLLGPPGIAKSLIA 58 (500)
T ss_dssp HHHHHHHHHTC--EEEEECCSSSSHHHHH
T ss_pred HHHHHHHhcCC--eeEeecCchHHHHHHH
Confidence 33444444554 4678999999999653
No 209
>1odf_A YGR205W, hypothetical 33.3 kDa protein in ADE3-Ser2 intergenic region; yeast protein, ATP binding protein; 2.25A {Saccharomyces cerevisiae} SCOP: c.37.1.6
Probab=45.61 E-value=3.2 Score=36.19 Aligned_cols=17 Identities=29% Similarity=0.559 Sum_probs=12.6
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..|.-.|++|||||+.+
T Consensus 32 ~ii~I~G~sGsGKSTla 48 (290)
T 1odf_A 32 LFIFFSGPQGSGKSFTS 48 (290)
T ss_dssp EEEEEECCTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 34556699999999653
No 210
>2j41_A Guanylate kinase; GMP, GMK, transferase, ATP-binding, nucleotide- binding; HET: 5GP; 1.9A {Staphylococcus aureus}
Probab=45.39 E-value=2.4 Score=33.99 Aligned_cols=14 Identities=29% Similarity=0.465 Sum_probs=11.1
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|++|||||+.
T Consensus 9 i~l~G~~GsGKSTl 22 (207)
T 2j41_A 9 IVLSGPSGVGKGTV 22 (207)
T ss_dssp EEEECSTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45569999999954
No 211
>2bdt_A BH3686; alpha-beta protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG, function; 2.40A {Bacillus halodurans} SCOP: c.37.1.25
Probab=45.08 E-value=2.5 Score=33.66 Aligned_cols=16 Identities=31% Similarity=0.468 Sum_probs=12.1
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
+.-.|++|||||+.+-
T Consensus 5 i~l~G~~GaGKSTl~~ 20 (189)
T 2bdt_A 5 YIITGPAGVGKSTTCK 20 (189)
T ss_dssp EEEECSTTSSHHHHHH
T ss_pred EEEECCCCCcHHHHHH
Confidence 3456999999996543
No 212
>2ius_A DNA translocase FTSK; nucleotide-binding, chromosome partition, ATP-binding, DNA- binding, cell division, transmembrane, inner membrane; HET: DNA; 2.7A {Escherichia coli} PDB: 2j5p_A*
Probab=45.02 E-value=4.2 Score=38.67 Aligned_cols=22 Identities=45% Similarity=0.684 Sum_probs=16.7
Q ss_pred hhhhhcccCCCceEeehHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r 83 (279)
-++..|.||||||..+..|+..
T Consensus 169 HlLIaG~TGSGKSt~L~~li~s 190 (512)
T 2ius_A 169 HLLVAGTTGSGASVGVNAMILS 190 (512)
T ss_dssp SEEEECCTTSSHHHHHHHHHHH
T ss_pred eEEEECCCCCCHHHHHHHHHHH
Confidence 3567799999999887765543
No 213
>2ehv_A Hypothetical protein PH0186; KAIC, RECA ATPase, unknown function; HET: ADP; 2.07A {Pyrococcus horikoshii} PDB: 2zts_A*
Probab=44.99 E-value=3 Score=34.46 Aligned_cols=16 Identities=44% Similarity=0.536 Sum_probs=12.8
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
+.-.|++|||||+.+.
T Consensus 33 ~~l~GpnGsGKSTLl~ 48 (251)
T 2ehv_A 33 VLLTGGTGTGKTTFAA 48 (251)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEEeCCCCCHHHHHH
Confidence 4457999999997765
No 214
>1sxj_A Activator 1 95 kDa subunit; clamp loader, processivity clamp, DNA sliding clamp, AAA+ at polymerase, DNA-binding protein; HET: AGS ADP; 2.85A {Saccharomyces cerevisiae} SCOP: a.80.1.1 c.37.1.20
Probab=44.91 E-value=4 Score=38.48 Aligned_cols=18 Identities=33% Similarity=0.514 Sum_probs=14.8
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
-.++-||++|+|||+++.
T Consensus 78 ~~lLL~GppGtGKTtla~ 95 (516)
T 1sxj_A 78 RAAMLYGPPGIGKTTAAH 95 (516)
T ss_dssp SEEEEECSTTSSHHHHHH
T ss_pred cEEEEECCCCCCHHHHHH
Confidence 467889999999997644
No 215
>1gm5_A RECG; helicase, replication restart; HET: DNA ADP; 3.24A {Thermotoga maritima} SCOP: a.24.21.1 b.40.4.9 c.37.1.19 c.37.1.19
Probab=44.85 E-value=5.9 Score=39.62 Aligned_cols=23 Identities=26% Similarity=0.332 Sum_probs=16.5
Q ss_pred hcchhhhhhhhcccCCCceEeeh
Q psy7226 56 FNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 56 l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
-.+..-.++..|+||||||....
T Consensus 385 ~~~~~~~~Ll~a~TGSGKTlval 407 (780)
T 1gm5_A 385 ISEKPMNRLLQGDVGSGKTVVAQ 407 (780)
T ss_dssp HSSSCCCCEEECCSSSSHHHHHH
T ss_pred cccCCCcEEEEcCCCCCHHHHHH
Confidence 34444467888999999997643
No 216
>2xau_A PRE-mRNA-splicing factor ATP-dependent RNA helica; hydrolase, ribosome biogenesis, ATPase, ATP-binding, OB-fold; HET: ADP; 1.90A {Saccharomyces cerevisiae} PDB: 3kx2_B*
Probab=44.55 E-value=6.2 Score=39.34 Aligned_cols=13 Identities=46% Similarity=0.754 Sum_probs=11.1
Q ss_pred hhhhcccCCCceE
Q psy7226 63 LLAYGQTGGGKTY 75 (279)
Q Consensus 63 i~aYG~tgSGKTy 75 (279)
++..|+||||||.
T Consensus 112 vii~gpTGSGKTt 124 (773)
T 2xau_A 112 MVFVGETGSGKTT 124 (773)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 4566999999998
No 217
>2pt7_A CAG-ALFA; ATPase, protein-protein complex, type IV secretion, hydrolas binding complex; 2.40A {Helicobacter pylori} SCOP: c.37.1.11 PDB: 1nly_A* 1nlz_A 1opx_A* 1g6o_A
Probab=44.54 E-value=3.2 Score=36.92 Aligned_cols=15 Identities=40% Similarity=0.687 Sum_probs=11.7
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
+.-.|++|||||+++
T Consensus 174 v~i~G~~GsGKTTll 188 (330)
T 2pt7_A 174 VIVCGGTGSGKTTYI 188 (330)
T ss_dssp EEEEESTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 445699999999654
No 218
>3asz_A Uridine kinase; cytidine phosphorylation, transferase; HET: C5P; 2.25A {Thermus thermophilus} PDB: 3asy_A*
Probab=44.49 E-value=3.1 Score=33.65 Aligned_cols=14 Identities=36% Similarity=0.259 Sum_probs=10.8
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
--.|++|||||+.+
T Consensus 10 ~i~G~~GsGKSTl~ 23 (211)
T 3asz_A 10 GIAGGTASGKTTLA 23 (211)
T ss_dssp EEEESTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999653
No 219
>3sop_A Neuronal-specific septin-3; hydrolase; HET: GDP; 2.88A {Homo sapiens}
Probab=44.36 E-value=2.3 Score=36.76 Aligned_cols=16 Identities=38% Similarity=0.617 Sum_probs=12.6
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
++...|++|+|||+.|
T Consensus 4 ~v~lvG~nGaGKSTLl 19 (270)
T 3sop_A 4 NIMVVGQSGLGKSTLV 19 (270)
T ss_dssp EEEEEESSSSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4556799999999654
No 220
>1kag_A SKI, shikimate kinase I; transferase, structural genomics, PSI, protein structure initiative; 2.05A {Escherichia coli} SCOP: c.37.1.2
Probab=44.23 E-value=3.3 Score=32.24 Aligned_cols=16 Identities=25% Similarity=0.447 Sum_probs=12.5
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|+.|||||+.+
T Consensus 6 ~i~l~G~~GsGKSTl~ 21 (173)
T 1kag_A 6 NIFLVGPMGAGKSTIG 21 (173)
T ss_dssp CEEEECCTTSCHHHHH
T ss_pred eEEEECCCCCCHHHHH
Confidence 3566799999999653
No 221
>1kht_A Adenylate kinase; phosphotransferase, signaling protein, transferase; HET: AMP; 2.50A {Methanococcus voltae} SCOP: c.37.1.1 PDB: 3h86_B* 1ki9_A
Probab=44.01 E-value=3.3 Score=32.58 Aligned_cols=15 Identities=27% Similarity=0.426 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 5 ~I~i~G~~GsGKsT~ 19 (192)
T 1kht_A 5 VVVVTGVPGVGSTTS 19 (192)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 366789999999954
No 222
>1c4o_A DNA nucleotide excision repair enzyme UVRB; uvrabc, helicase, hypertherm protein, replication; HET: DNA BOG; 1.50A {Thermus thermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1d2m_A*
Probab=43.97 E-value=5.3 Score=39.08 Aligned_cols=50 Identities=24% Similarity=0.401 Sum_probs=30.2
Q ss_pred EeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeehHHHHH
Q psy7226 28 FIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 28 f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r 83 (279)
|.+... .|.-.|..-+. .+++.+-.|... ....|.||||||++|..++.+
T Consensus 2 ~~~~~~-~~~~~q~~ai~----~l~~~~~~~~~~-~~l~g~tgs~kt~~~a~~~~~ 51 (664)
T 1c4o_A 2 FRYRGP-SPKGDQPKAIA----GLVEALRDGERF-VTLLGATGTGKTVTMAKVIEA 51 (664)
T ss_dssp CCCCSC-CCCTTHHHHHH----HHHHHHHTTCSE-EEEEECTTSCHHHHHHHHHHH
T ss_pred CCCCCC-CCCCCChHHHH----HHHHHHhcCCCc-EEEEcCCCcHHHHHHHHHHHH
Confidence 344443 67777755543 344444455322 345699999999999855543
No 223
>3sqw_A ATP-dependent RNA helicase MSS116, mitochondrial; RECA fold, RNA dependent ATPase, RNA helicase; HET: ANP; 1.91A {Saccharomyces cerevisiae S288C}
Probab=43.88 E-value=5.2 Score=38.05 Aligned_cols=28 Identities=25% Similarity=0.453 Sum_probs=18.0
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..++..++.|.+--++..++||||||.+
T Consensus 49 ~~~i~~il~~~~~dvlv~apTGsGKTl~ 76 (579)
T 3sqw_A 49 QKTIKPILSSEDHDVIARAKTGTGKTFA 76 (579)
T ss_dssp HHHHHHHHCSSSEEEEEECCTTSCHHHH
T ss_pred HHHHHHHHccCCCeEEEEcCCCcHHHHH
Confidence 3455566633223356678999999975
No 224
>3kta_A Chromosome segregation protein SMC; structural maintenance of chromosomes, ABC ATPase, CFTR adenylate kinase, AP5A, transferase; HET: AP5; 1.63A {Pyrococcus furiosus} PDB: 1xex_A* 1xew_X*
Probab=43.63 E-value=4 Score=32.14 Aligned_cols=15 Identities=27% Similarity=0.346 Sum_probs=11.5
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
..-+|++|||||..+
T Consensus 29 ~~i~G~NGsGKStll 43 (182)
T 3kta_A 29 TAIVGANGSGKSNIG 43 (182)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 356799999999543
No 225
>2qnr_A Septin-2, protein NEDD5; structural genomics consortium, SGC, mitosis, GDP, C cycle, cell division, GTP-binding, nucleotide-binding; HET: GDP; 2.60A {Homo sapiens} PDB: 2qa5_A* 3ftq_A*
Probab=43.53 E-value=2.4 Score=37.07 Aligned_cols=23 Identities=30% Similarity=0.534 Sum_probs=15.5
Q ss_pred hhcchhhhhhhhcccCCCceEee
Q psy7226 55 MFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
+++|.+..|...|++|+|||..|
T Consensus 13 ~l~~~~~~I~lvG~nG~GKSTLl 35 (301)
T 2qnr_A 13 VKKGFEFTLMVVGESGLGKSTLI 35 (301)
T ss_dssp -----CEEEEEEEETTSSHHHHH
T ss_pred EEcCCCEEEEEECCCCCCHHHHH
Confidence 56788888888899999999654
No 226
>2zr9_A Protein RECA, recombinase A; recombination, RECA mutants, DNA-repair, ATP-binding, DNA DA recombination, DNA repair, DNA-binding; HET: DTP; 2.50A {Mycobacterium smegmatis str} PDB: 2zr0_A* 2zra_A* 2zrb_A 2zrm_A* 1ubc_A* 1ubf_A* 1ubg_A* 1ube_A* 2g88_A* 2odw_A* 2oe2_A 2oep_A* 2oes_A 2ofo_A 2zr7_A 2odn_A* 2zrn_A 2zro_A* 2zrp_A* 2zre_A* ...
Probab=43.44 E-value=6.1 Score=35.40 Aligned_cols=34 Identities=18% Similarity=0.262 Sum_probs=24.6
Q ss_pred hHHhHHhhhc--chh--hhhhhhcccCCCceEeehHHH
Q psy7226 48 LVPLINHMFN--GIN--ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 48 ~~plv~~~l~--G~n--~~i~aYG~tgSGKTyTm~Gii 81 (279)
.-+-+|.++. |.. ..+.-||+.|||||..+.-++
T Consensus 45 G~~~LD~~Lg~GGl~~G~iv~I~G~pGsGKTtLal~la 82 (349)
T 2zr9_A 45 GSISLDVALGIGGLPRGRVIEIYGPESSGKTTVALHAV 82 (349)
T ss_dssp SCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHH
T ss_pred CCHHHHHHhccCCccCCeEEEEECCCCCCHHHHHHHHH
Confidence 4667788887 443 447788999999998765443
No 227
>4a2q_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.40A {Anas platyrhynchos}
Probab=43.31 E-value=6.5 Score=39.07 Aligned_cols=25 Identities=40% Similarity=0.579 Sum_probs=18.4
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..+..++.|.+ ++..++||||||.+
T Consensus 255 ~~i~~~l~~~~--~ll~~~TGsGKTl~ 279 (797)
T 4a2q_A 255 ELAQPAINGKN--ALICAPTGSGKTFV 279 (797)
T ss_dssp HHHHHHHTTCC--EEEECCTTSCHHHH
T ss_pred HHHHHHHhCCC--EEEEeCCCChHHHH
Confidence 35556677876 45668999999965
No 228
>2qag_C Septin-7; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=43.13 E-value=2.4 Score=39.14 Aligned_cols=23 Identities=30% Similarity=0.527 Sum_probs=18.5
Q ss_pred hhcchhhhhhhhcccCCCceEee
Q psy7226 55 MFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
+++|.+..|...|++|+|||..+
T Consensus 26 vl~~vsf~I~lvG~sGaGKSTLl 48 (418)
T 2qag_C 26 VKRGFEFTLMVVGESGLGKSTLI 48 (418)
T ss_dssp CC-CCCEEEEEECCTTSSHHHHH
T ss_pred EecCCCEEEEEECCCCCcHHHHH
Confidence 57788888888899999999654
No 229
>2i3b_A HCR-ntpase, human cancer-related ntpase; AAA, rossmann, hydrolase; NMR {Homo sapiens} SCOP: c.37.1.11
Probab=43.04 E-value=3.7 Score=33.41 Aligned_cols=16 Identities=31% Similarity=0.470 Sum_probs=12.2
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
+.-.|++|+|||+++.
T Consensus 4 i~i~G~nG~GKTTll~ 19 (189)
T 2i3b_A 4 VFLTGPPGVGKTTLIH 19 (189)
T ss_dssp EEEESCCSSCHHHHHH
T ss_pred EEEECCCCChHHHHHH
Confidence 3456999999997644
No 230
>3kb2_A SPBC2 prophage-derived uncharacterized protein YORR; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; HET: G3D; 2.20A {Bacillus subtilis} SCOP: c.37.1.1 PDB: 2axp_A*
Probab=42.91 E-value=3.6 Score=31.77 Aligned_cols=14 Identities=14% Similarity=0.043 Sum_probs=11.2
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 4 i~l~G~~GsGKsT~ 17 (173)
T 3kb2_A 4 IILEGPDCCFKSTV 17 (173)
T ss_dssp EEEECSSSSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45579999999954
No 231
>1gku_B Reverse gyrase, TOP-RG; topoisomerase, DNA supercoiling, archaea, helicase; 2.7A {Archaeoglobus fulgidus} SCOP: c.37.1.16 c.37.1.16 e.10.1.1 PDB: 1gl9_B*
Probab=42.05 E-value=6.9 Score=40.46 Aligned_cols=24 Identities=25% Similarity=0.181 Sum_probs=17.9
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceE
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTY 75 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTy 75 (279)
..+..+++|.|+ +..++||||||.
T Consensus 63 ~ai~~il~g~dv--lv~apTGSGKTl 86 (1054)
T 1gku_B 63 MWAKRILRKESF--AATAPTGVGKTS 86 (1054)
T ss_dssp HHHHHHHTTCCE--ECCCCBTSCSHH
T ss_pred HHHHHHHhCCCE--EEEcCCCCCHHH
Confidence 445567788764 667899999994
No 232
>3tif_A Uncharacterized ABC transporter ATP-binding prote; nucleotide-binding domain, ABC transporter ATPase; HET: ADP; 1.80A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} PDB: 1l2t_A* 1f3o_A*
Probab=41.78 E-value=3.7 Score=34.51 Aligned_cols=14 Identities=29% Similarity=0.534 Sum_probs=10.9
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 35 ~iiG~nGsGKSTLl 48 (235)
T 3tif_A 35 SIMGPSGSGKSTML 48 (235)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCcHHHHH
Confidence 34599999999654
No 233
>2zts_A Putative uncharacterized protein PH0186; KAIC like protein, ATP-binding, nucleotide-binding, ATP- binding protein; HET: ADP; 2.07A {Pyrococcus horikoshii}
Probab=41.65 E-value=5.8 Score=32.58 Aligned_cols=32 Identities=31% Similarity=0.537 Sum_probs=21.3
Q ss_pred HHhHHhhhc-chh--hhhhhhcccCCCceEeehHH
Q psy7226 49 VPLINHMFN-GIN--ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 49 ~plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~Gi 80 (279)
-|-+|.++. |.. ..++-+|.+|+|||.-+.-+
T Consensus 16 i~~LD~~l~GGl~~G~l~~i~G~pG~GKT~l~l~~ 50 (251)
T 2zts_A 16 IPGFDELIEGGFPEGTTVLLTGGTGTGKTTFAAQF 50 (251)
T ss_dssp CTTTGGGTTTSEETTCEEEEECCTTSSHHHHHHHH
T ss_pred cHHHHHhhcCCCCCCeEEEEEeCCCCCHHHHHHHH
Confidence 455677775 432 34667899999999654433
No 234
>2rhm_A Putative kinase; P-loop containing nucleoside triphosphate hydrolases fold, S genomics, joint center for structural genomics, JCSG; HET: MSE; 1.70A {Chloroflexus aurantiacus}
Probab=41.38 E-value=3.9 Score=32.34 Aligned_cols=16 Identities=25% Similarity=0.374 Sum_probs=12.9
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+..|..|||||+..
T Consensus 7 ~I~l~G~~GsGKST~~ 22 (193)
T 2rhm_A 7 LIIVTGHPATGKTTLS 22 (193)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4677899999999753
No 235
>2ze6_A Isopentenyl transferase; crown GALL tumor, cytokinin biosynthesis; HET: DST AMP; 2.10A {Agrobacterium tumefaciens} PDB: 2ze5_A* 2ze7_A* 2ze8_A
Probab=41.08 E-value=4.9 Score=34.00 Aligned_cols=13 Identities=54% Similarity=0.665 Sum_probs=10.9
Q ss_pred hhhhcccCCCceE
Q psy7226 63 LLAYGQTGGGKTY 75 (279)
Q Consensus 63 i~aYG~tgSGKTy 75 (279)
|+-.|++|||||+
T Consensus 4 i~I~G~~GSGKST 16 (253)
T 2ze6_A 4 HLIYGPTCSGKTD 16 (253)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCcCHHH
Confidence 4567999999995
No 236
>3uie_A Adenylyl-sulfate kinase 1, chloroplastic; rossmann fold, transferase-transferase complex; HET: ADX ANP; 1.79A {Arabidopsis thaliana} SCOP: c.37.1.0 PDB: 4fxp_A*
Probab=41.06 E-value=3 Score=33.73 Aligned_cols=17 Identities=24% Similarity=0.442 Sum_probs=13.0
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..|.-.|++|||||+.+
T Consensus 26 ~~i~l~G~sGsGKSTl~ 42 (200)
T 3uie_A 26 CVIWVTGLSGSGKSTLA 42 (200)
T ss_dssp EEEEEECSTTSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 45667799999999553
No 237
>2og2_A Putative signal recognition particle receptor; nucleotide-binding, protein transport; 2.00A {Arabidopsis thaliana}
Probab=41.05 E-value=4.1 Score=36.83 Aligned_cols=17 Identities=35% Similarity=0.718 Sum_probs=13.5
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|.-.|++|||||+++.
T Consensus 159 vi~lvG~nGsGKTTll~ 175 (359)
T 2og2_A 159 VIMIVGVNGGGKTTSLG 175 (359)
T ss_dssp EEEEECCTTSCHHHHHH
T ss_pred EEEEEcCCCChHHHHHH
Confidence 45567999999997754
No 238
>3pxi_A Negative regulator of genetic competence CLPC/MEC; CLPB, proteolysis, CLPX, HSP100/CLP, AAA+ proteins, PR binding; 6.93A {Bacillus subtilis}
Probab=40.86 E-value=3.7 Score=40.66 Aligned_cols=16 Identities=38% Similarity=0.513 Sum_probs=13.6
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.++-||++|+|||+..
T Consensus 523 ~~Ll~Gp~GtGKT~lA 538 (758)
T 3pxi_A 523 SFIFLGPTGVGKTELA 538 (758)
T ss_dssp EEEEESCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 5888999999999653
No 239
>1uaa_A REP helicase, protein (ATP-dependent DNA helicase REP.); complex (helicase/DNA), DNA unwinding, hydrolase/DNA complex; HET: DNA; 3.00A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19
Probab=40.66 E-value=6.2 Score=38.33 Aligned_cols=20 Identities=25% Similarity=0.428 Sum_probs=15.2
Q ss_pred hhhhhhhcccCCCceEeehH
Q psy7226 60 NATLLAYGQTGGGKTYTVSA 79 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~G 79 (279)
+..++..|..|||||++|..
T Consensus 15 ~~~~lV~AgaGSGKT~~l~~ 34 (673)
T 1uaa_A 15 TGPCLVLAGAGSGKTRVITN 34 (673)
T ss_dssp SSEEEECCCTTSCHHHHHHH
T ss_pred CCCEEEEeCCCCChHHHHHH
Confidence 34556668899999999763
No 240
>3aez_A Pantothenate kinase; transferase, homodimer, COA biosynthesis, nucleotide binding binding, cytoplasm, nucleotide-binding; HET: GDP PAZ; 2.20A {Mycobacterium tuberculosis} PDB: 2ges_A* 2geu_A* 2gev_A* 2zs7_A* 2zs8_A* 2zs9_A* 2zsa_A* 2zsb_A* 2zsd_A* 2zse_A* 2zsf_A* 2get_A* 3af0_A* 3af1_A* 3af2_A* 3af3_A* 3af4_A* 3avp_A* 3avo_A* 3avq_A*
Probab=40.57 E-value=5.3 Score=35.19 Aligned_cols=15 Identities=27% Similarity=0.275 Sum_probs=11.5
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|--.|++|||||+.+
T Consensus 93 vgI~G~sGsGKSTL~ 107 (312)
T 3aez_A 93 IGVAGSVAVGKSTTA 107 (312)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCCchHHHHH
Confidence 344599999999664
No 241
>1htw_A HI0065; nucleotide-binding fold, structural genomics, structure 2 function project, S2F, unknown function; HET: ADP; 1.70A {Haemophilus influenzae} SCOP: c.37.1.18 PDB: 1fl9_A
Probab=40.45 E-value=5 Score=31.59 Aligned_cols=17 Identities=29% Similarity=0.409 Sum_probs=12.7
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
++.-.|+.|+|||+.+-
T Consensus 35 ~v~L~G~nGaGKTTLlr 51 (158)
T 1htw_A 35 MVYLNGDLGAGKTTLTR 51 (158)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 34566999999996544
No 242
>2px0_A Flagellar biosynthesis protein FLHF; SRP GTPase, flagellum, protein transport, biosynthetic protein; HET: GNP; 3.00A {Bacillus subtilis} PDB: 2px3_A* 3syn_A*
Probab=40.41 E-value=4.7 Score=35.21 Aligned_cols=19 Identities=37% Similarity=0.723 Sum_probs=14.5
Q ss_pred hhhhhcccCCCceEeehHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gi 80 (279)
.|...|++|+|||+++.-|
T Consensus 107 vi~lvG~~GsGKTTl~~~L 125 (296)
T 2px0_A 107 YIVLFGSTGAGKTTTLAKL 125 (296)
T ss_dssp EEEEEESTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 4555699999999886644
No 243
>2ce7_A Cell division protein FTSH; metalloprotease; HET: ADP; 2.44A {Thermotoga maritima} SCOP: a.269.1.1 c.37.1.20 PDB: 2cea_A* 3kds_E*
Probab=40.32 E-value=3.5 Score=38.77 Aligned_cols=17 Identities=35% Similarity=0.516 Sum_probs=14.1
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|+-||++|+|||+.+-
T Consensus 51 gvLL~GppGtGKT~Lar 67 (476)
T 2ce7_A 51 GILLVGPPGTGKTLLAR 67 (476)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred eEEEECCCCCCHHHHHH
Confidence 48899999999996543
No 244
>1np6_A Molybdopterin-guanine dinucleotide biosynthesis protein B; mixed alpha-beta fold, elongated beta-sheet, walker A motif, P-loop structural motif; 1.90A {Escherichia coli} SCOP: c.37.1.10 PDB: 1p9n_A
Probab=40.30 E-value=6.1 Score=31.66 Aligned_cols=20 Identities=25% Similarity=0.230 Sum_probs=14.3
Q ss_pred hhhcccCCCceEeehHHHHH
Q psy7226 64 LAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~Gii~r 83 (279)
.-.|.+|||||..+..|+..
T Consensus 10 ~i~G~sGsGKTTl~~~l~~~ 29 (174)
T 1np6_A 10 AFAAWSGTGKTTLLKKLIPA 29 (174)
T ss_dssp EEECCTTSCHHHHHHHHHHH
T ss_pred EEEeCCCCCHHHHHHHHHHh
Confidence 34599999999766555543
No 245
>1qvr_A CLPB protein; coiled coil, AAA ATPase, chaperone; HET: ANP; 3.00A {Thermus thermophilus} SCOP: a.174.1.1 c.37.1.20 c.37.1.20
Probab=39.79 E-value=4.4 Score=40.80 Aligned_cols=17 Identities=41% Similarity=0.517 Sum_probs=14.2
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..++-||++|+|||+..
T Consensus 589 ~~vLl~Gp~GtGKT~lA 605 (854)
T 1qvr_A 589 GSFLFLGPTGVGKTELA 605 (854)
T ss_dssp EEEEEBSCSSSSHHHHH
T ss_pred eEEEEECCCCCCHHHHH
Confidence 46888999999999653
No 246
>3cf2_A TER ATPase, transitional endoplasmic reticulum ATPase, valosi; AAA, CDC48, ERAD, transport protein; HET: ADP ANP; 3.50A {Mus musculus} PDB: 3cf1_A* 3cf3_A* 1r7r_A*
Probab=39.45 E-value=3.5 Score=41.40 Aligned_cols=16 Identities=44% Similarity=0.665 Sum_probs=13.5
Q ss_pred hhhhhhcccCCCceEe
Q psy7226 61 ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyT 76 (279)
-.|+-||+.|+|||+.
T Consensus 512 ~gvLl~GPPGtGKT~l 527 (806)
T 3cf2_A 512 KGVLFYGPPGCGKTLL 527 (806)
T ss_dssp SCCEEESSTTSSHHHH
T ss_pred ceEEEecCCCCCchHH
Confidence 3578999999999954
No 247
>3cm0_A Adenylate kinase; ATP-binding, cytoplasm, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics; 1.80A {Thermus thermophilus}
Probab=39.40 E-value=4.3 Score=31.93 Aligned_cols=15 Identities=27% Similarity=0.519 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 6 ~I~l~G~~GsGKST~ 20 (186)
T 3cm0_A 6 AVIFLGPPGAGKGTQ 20 (186)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 366779999999954
No 248
>1tev_A UMP-CMP kinase; ploop, NMP binding region, LID region, conformational changes, transferase; 2.10A {Homo sapiens} SCOP: c.37.1.1
Probab=39.05 E-value=4.5 Score=31.87 Aligned_cols=15 Identities=27% Similarity=0.523 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 5 ~I~l~G~~GsGKsT~ 19 (196)
T 1tev_A 5 VVFVLGGPGAGKGTQ 19 (196)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 356679999999964
No 249
>3e70_C DPA, signal recognition particle receptor; FTSY, SRP-GTPase, protein-targeting, transport protein; HET: GDP; 1.97A {Pyrococcus furiosus} PDB: 3dmd_B 3dm9_B*
Probab=38.91 E-value=3.5 Score=36.71 Aligned_cols=18 Identities=33% Similarity=0.530 Sum_probs=13.9
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..+.-.|++|+|||+++.
T Consensus 130 ~vi~lvG~nGaGKTTll~ 147 (328)
T 3e70_C 130 YVIMFVGFNGSGKTTTIA 147 (328)
T ss_dssp EEEEEECCTTSSHHHHHH
T ss_pred eEEEEECCCCCCHHHHHH
Confidence 345667999999997754
No 250
>2qen_A Walker-type ATPase; unknown function; HET: ADP; 2.25A {Pyrococcus abyssi}
Probab=38.77 E-value=5.3 Score=34.55 Aligned_cols=18 Identities=22% Similarity=0.194 Sum_probs=14.9
Q ss_pred hhhhhhcccCCCceEeeh
Q psy7226 61 ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~ 78 (279)
..++-+|+.|+|||..+.
T Consensus 32 ~~v~i~G~~G~GKT~Ll~ 49 (350)
T 2qen_A 32 PLTLLLGIRRVGKSSLLR 49 (350)
T ss_dssp SEEEEECCTTSSHHHHHH
T ss_pred CeEEEECCCcCCHHHHHH
Confidence 567889999999997654
No 251
>2zj8_A DNA helicase, putative SKI2-type helicase; RECA fold, ATP-binding, hydrolase, nucleotide- binding; 2.00A {Pyrococcus furiosus} PDB: 2zj5_A* 2zj2_A 2zja_A*
Probab=38.72 E-value=6.2 Score=38.66 Aligned_cols=21 Identities=33% Similarity=0.387 Sum_probs=15.4
Q ss_pred hhcchhhhhhhhcccCCCceEee
Q psy7226 55 MFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
+.+|.| ++..|+||||||...
T Consensus 36 ~~~~~~--~lv~apTGsGKT~~~ 56 (720)
T 2zj8_A 36 ILEGKN--ALISIPTASGKTLIA 56 (720)
T ss_dssp GGGTCE--EEEECCGGGCHHHHH
T ss_pred hcCCCc--EEEEcCCccHHHHHH
Confidence 445655 567799999999653
No 252
>1nks_A Adenylate kinase; thermophilic, transferase; HET: AMP ADP; 2.57A {Sulfolobus acidocaldarius} SCOP: c.37.1.1
Probab=38.10 E-value=4.6 Score=31.71 Aligned_cols=14 Identities=29% Similarity=0.337 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 4 I~i~G~~GsGKsT~ 17 (194)
T 1nks_A 4 GIVTGIPGVGKSTV 17 (194)
T ss_dssp EEEEECTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 55679999999953
No 253
>1oyw_A RECQ helicase, ATP-dependent DNA helicase; winged helix, helix-turn-helix, ATP binding, Zn(2+) binding, hydrolase; 1.80A {Escherichia coli} SCOP: a.4.5.43 c.37.1.19 c.37.1.19 PDB: 1oyy_A*
Probab=38.07 E-value=4.3 Score=38.39 Aligned_cols=26 Identities=31% Similarity=0.558 Sum_probs=18.9
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..++..+++|.++ +..++||+|||.+
T Consensus 31 ~~~i~~il~g~d~--lv~apTGsGKTl~ 56 (523)
T 1oyw_A 31 EEIIDTVLSGRDC--LVVMPTGGGKSLC 56 (523)
T ss_dssp HHHHHHHHTTCCE--EEECSCHHHHHHH
T ss_pred HHHHHHHHcCCCE--EEECCCCcHHHHH
Confidence 4456667788875 4457999999964
No 254
>1y63_A LMAJ004144AAA protein; structural genomics, protein structure initiative, PSI, SGPP structural genomics of pathogenic protozoa consortium; HET: ADP; 1.70A {Leishmania major} SCOP: c.37.1.1
Probab=37.97 E-value=4.7 Score=32.03 Aligned_cols=15 Identities=40% Similarity=0.592 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 12 ~I~l~G~~GsGKSTv 26 (184)
T 1y63_A 12 NILITGTPGTGKTSM 26 (184)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 367789999999954
No 255
>2xgj_A ATP-dependent RNA helicase DOB1; hydrolase-RNA complex, hydrolase, tramp, exosome, DEAD, nucleotide-binding; HET: ADP; 2.90A {Saccharomyces cerevisiae}
Probab=37.91 E-value=8.3 Score=39.67 Aligned_cols=26 Identities=27% Similarity=0.335 Sum_probs=19.0
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
..+..+..|.+ ++..++||||||...
T Consensus 93 eai~~l~~g~~--vLV~apTGSGKTlva 118 (1010)
T 2xgj_A 93 TAISCIDRGES--VLVSAHTSAGKTVVA 118 (1010)
T ss_dssp HHHHHHHHTCE--EEEECCTTSCHHHHH
T ss_pred HHHHHHHcCCC--EEEECCCCCChHHHH
Confidence 45555667776 566789999999753
No 256
>3vaa_A Shikimate kinase, SK; structural genomics, center for structural genomics of infec diseases, csgid, metal binding, transferase; 1.70A {Bacteroides thetaiotaomicron}
Probab=37.84 E-value=5.6 Score=32.01 Aligned_cols=16 Identities=31% Similarity=0.391 Sum_probs=12.8
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+-.|++|||||+..
T Consensus 27 ~i~l~G~~GsGKsTl~ 42 (199)
T 3vaa_A 27 RIFLTGYMGAGKTTLG 42 (199)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 4667799999999653
No 257
>2qor_A Guanylate kinase; phosphotransferase, purine metabolism, structural genomics, structural genomics of pathogenic protozoa consortium; HET: 5GP POP; 1.80A {Plasmodium vivax}
Probab=37.78 E-value=5.9 Score=31.98 Aligned_cols=14 Identities=36% Similarity=0.527 Sum_probs=11.2
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|++|||||+.
T Consensus 15 i~l~G~sGsGKsTl 28 (204)
T 2qor_A 15 LVVCGPSGVGKGTL 28 (204)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45679999999953
No 258
>3t61_A Gluconokinase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium, nysgrc; 2.20A {Sinorhizobium meliloti}
Probab=37.59 E-value=4.8 Score=32.33 Aligned_cols=15 Identities=27% Similarity=0.645 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 20 ~I~l~G~~GsGKSTl 34 (202)
T 3t61_A 20 SIVVMGVSGSGKSSV 34 (202)
T ss_dssp CEEEECSTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466779999999954
No 259
>1e6c_A Shikimate kinase; phosphoryl transfer, ADP, shikimate pathway, P-loop protein, transferase; 1.8A {Erwinia chrysanthemi} SCOP: c.37.1.2 PDB: 1shk_A 2shk_A*
Probab=37.54 E-value=4.8 Score=31.17 Aligned_cols=15 Identities=27% Similarity=0.364 Sum_probs=12.0
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|+-.|..|||||+..
T Consensus 5 I~l~G~~GsGKsT~a 19 (173)
T 1e6c_A 5 IFMVGARGCGMTTVG 19 (173)
T ss_dssp EEEESCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 566799999999653
No 260
>2w00_A HSDR, R.ECOR124I; ATP-binding, DNA-binding, restriction system, helicase, HYDR R.ECOR124I, nucleotide-binding; HET: ATP; 2.6A {Escherichia coli} PDB: 2y3t_A* 2w74_B*
Probab=36.99 E-value=9.3 Score=39.48 Aligned_cols=18 Identities=33% Similarity=0.381 Sum_probs=14.0
Q ss_pred hhhcccCCCceEeehHHH
Q psy7226 64 LAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~Gii 81 (279)
+...+||||||.|++.++
T Consensus 304 li~~~TGSGKT~t~~~l~ 321 (1038)
T 2w00_A 304 YIWHTTGSGKTLTSFKAA 321 (1038)
T ss_dssp EEEECTTSSHHHHHHHHH
T ss_pred EEEecCCCCHHHHHHHHH
Confidence 455689999999986554
No 261
>1s96_A Guanylate kinase, GMP kinase; E.coli, dimer, SAD, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.1 PDB: 2an9_A* 2anb_A* 2anc_A 2f3r_A* 2f3t_A*
Probab=36.88 E-value=4.9 Score=33.42 Aligned_cols=14 Identities=21% Similarity=0.430 Sum_probs=10.8
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
+.-.|++|||||+.
T Consensus 19 i~l~GpsGsGKSTL 32 (219)
T 1s96_A 19 YIVSAPSGAGKSSL 32 (219)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 34459999999954
No 262
>2v6i_A RNA helicase; membrane, hydrolase, transmembrane, RNA replication, viral replication, nucleotide-binding; 2.10A {Kokobera virus} PDB: 2v6j_A
Probab=36.82 E-value=6.7 Score=35.94 Aligned_cols=15 Identities=33% Similarity=0.317 Sum_probs=12.6
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
++..|+||||||...
T Consensus 5 ~lv~a~TGsGKT~~~ 19 (431)
T 2v6i_A 5 TVLDLHPGAGKTRRV 19 (431)
T ss_dssp EEEECCTTSCTTTTH
T ss_pred EEEEcCCCCCHHHHH
Confidence 567799999999874
No 263
>2pcj_A ABC transporter, lipoprotein-releasing system ATP-binding protein; structural genomics; 1.70A {Aquifex aeolicus} PDB: 2pcl_A
Probab=36.67 E-value=4.9 Score=33.45 Aligned_cols=13 Identities=31% Similarity=0.598 Sum_probs=10.4
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-.|++|||||+.+
T Consensus 35 iiG~nGsGKSTLl 47 (224)
T 2pcj_A 35 IIGASGSGKSTLL 47 (224)
T ss_dssp EEECTTSCHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4499999999654
No 264
>1knq_A Gluconate kinase; ALFA/beta structure, transferase; 2.00A {Escherichia coli} SCOP: c.37.1.17 PDB: 1ko1_A 1ko4_A 1ko5_A* 1ko8_A* 1kof_A*
Probab=36.59 E-value=4.8 Score=31.43 Aligned_cols=16 Identities=25% Similarity=0.472 Sum_probs=12.3
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|+.|||||+.+
T Consensus 10 ~i~l~G~~GsGKSTl~ 25 (175)
T 1knq_A 10 IYVLMGVSGSGKSAVA 25 (175)
T ss_dssp EEEEECSTTSCHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 3556799999999653
No 265
>2jeo_A Uridine-cytidine kinase 1; UCK, transferase, ATP-binding, nucleoside kinase, nucleotide-binding; 2.50A {Homo sapiens} PDB: 2uvq_A*
Probab=36.24 E-value=5.1 Score=33.49 Aligned_cols=13 Identities=31% Similarity=0.427 Sum_probs=10.4
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
--|+.|||||+.+
T Consensus 30 I~G~~GsGKSTl~ 42 (245)
T 2jeo_A 30 VSGGTASGKSTVC 42 (245)
T ss_dssp EECSTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4499999999654
No 266
>2bbw_A Adenylate kinase 4, AK4; nucleotide kinase, nucleotide binding, human, structura genomics, structural genomics consortium, SGC, transferase; HET: GP5; 2.05A {Homo sapiens} PDB: 2ar7_A* 3ndp_A
Probab=36.18 E-value=4.3 Score=33.94 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=12.9
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|+.|||||+.+
T Consensus 29 ~i~l~G~~GsGKSTl~ 44 (246)
T 2bbw_A 29 RAVILGPPGSGKGTVC 44 (246)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4667799999999654
No 267
>1moz_A ARL1, ADP-ribosylation factor-like protein 1; GTP-binding, protein binding; HET: GDP; 3.17A {Saccharomyces cerevisiae} SCOP: c.37.1.8
Probab=36.03 E-value=9.1 Score=29.52 Aligned_cols=28 Identities=21% Similarity=0.459 Sum_probs=19.3
Q ss_pred HHhHHhhhc-chhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFN-GINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~-G~n~~i~aYG~tgSGKTyT 76 (279)
..++..++. ....-|...|.+|+|||..
T Consensus 6 ~~~~~~~~~~~~~~~i~v~G~~~~GKssl 34 (183)
T 1moz_A 6 SSMFDKLWGSNKELRILILGLDGAGKTTI 34 (183)
T ss_dssp HHHHGGGTTCSSCEEEEEEEETTSSHHHH
T ss_pred HHHHHHhcCCCCccEEEEECCCCCCHHHH
Confidence 344455555 4555678889999999953
No 268
>3rc3_A ATP-dependent RNA helicase SUPV3L1, mitochondrial; SUV3, nucleus, hydrolase; HET: ANP; 2.08A {Homo sapiens} PDB: 3rc8_A
Probab=35.99 E-value=5.6 Score=39.08 Aligned_cols=19 Identities=32% Similarity=0.485 Sum_probs=14.5
Q ss_pred hhcchhhhhhhhcccCCCceE
Q psy7226 55 MFNGINATLLAYGQTGGGKTY 75 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTy 75 (279)
.++|.+ ++..|+||||||+
T Consensus 152 ~l~rk~--vlv~apTGSGKT~ 170 (677)
T 3rc3_A 152 AMQRKI--IFHSGPTNSGKTY 170 (677)
T ss_dssp TSCCEE--EEEECCTTSSHHH
T ss_pred hcCCCE--EEEEcCCCCCHHH
Confidence 445654 5777999999997
No 269
>2vli_A Antibiotic resistance protein; transferase, tunicamycin, phosphotransferase; 1.95A {Deinococcus radiodurans}
Probab=35.96 E-value=5.3 Score=31.23 Aligned_cols=15 Identities=40% Similarity=0.432 Sum_probs=8.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 7 ~I~l~G~~GsGKST~ 21 (183)
T 2vli_A 7 IIWINGPFGVGKTHT 21 (183)
T ss_dssp EEEEECCC----CHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466789999999953
No 270
>2iyv_A Shikimate kinase, SK; transferase, aromatic amino acid biosynthesis, P-loop kinase, metal- binding, shikimate pathway; HET: ADP; 1.35A {Mycobacterium tuberculosis} SCOP: c.37.1.2 PDB: 2iyr_A* 2iyq_A* 2iyt_A 2iyu_A* 2iys_A* 2iyw_A* 2iyx_A* 2iyy_A* 2iyz_A* 2g1k_A* 1l4y_A* 1u8a_A* 1we2_A* 1zyu_A* 2dfn_A* 2dft_A* 2g1j_A 1l4u_A* 3baf_A*
Probab=35.91 E-value=5.3 Score=31.42 Aligned_cols=14 Identities=29% Similarity=0.458 Sum_probs=11.7
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 5 I~l~G~~GsGKsT~ 18 (184)
T 2iyv_A 5 AVLVGLPGSGKSTI 18 (184)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56679999999965
No 271
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=35.85 E-value=5.3 Score=31.25 Aligned_cols=15 Identities=27% Similarity=0.450 Sum_probs=12.0
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|+-.|+.|||||+..
T Consensus 7 i~i~G~~GsGKsTla 21 (175)
T 1via_A 7 IVFIGFMGSGKSTLA 21 (175)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEEcCCCCCHHHHH
Confidence 566799999999653
No 272
>3gfo_A Cobalt import ATP-binding protein CBIO 1; structural genomics, cell membrane, cobalt transport, hydrolase, ION transport; 2.30A {Clostridium perfringens atcc 13124}
Probab=35.82 E-value=5.3 Score=34.56 Aligned_cols=14 Identities=29% Similarity=0.406 Sum_probs=11.3
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.+-
T Consensus 39 iiGpnGsGKSTLl~ 52 (275)
T 3gfo_A 39 ILGGNGVGKSTLFQ 52 (275)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EECCCCCCHHHHHH
Confidence 45999999997754
No 273
>3qks_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATPase, exonuclease, endonucle binding, DNA binding; HET: DNA; 2.10A {Pyrococcus furiosus} PDB: 3qkr_A*
Probab=35.50 E-value=6.1 Score=32.26 Aligned_cols=15 Identities=40% Similarity=0.660 Sum_probs=11.5
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
+-+|++|||||..+.
T Consensus 27 ~I~G~NgsGKStil~ 41 (203)
T 3qks_A 27 LIIGQNGSGKSSLLD 41 (203)
T ss_dssp EEECCTTSSHHHHHH
T ss_pred EEEcCCCCCHHHHHH
Confidence 456999999995543
No 274
>2bwj_A Adenylate kinase 5; phosphoryl transfer reaction, transferase; HET: AMP; 2.3A {Homo sapiens}
Probab=35.41 E-value=5.5 Score=31.58 Aligned_cols=15 Identities=27% Similarity=0.494 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 14 ~I~l~G~~GsGKsT~ 28 (199)
T 2bwj_A 14 IIFIIGGPGSGKGTQ 28 (199)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466779999999964
No 275
>4g1u_C Hemin import ATP-binding protein HMUV; membrane transporter, type II ABC importer, HMUT, plasma MEM transport protein-hydrolase complex; 3.01A {Yersinia pestis}
Probab=35.38 E-value=5.4 Score=34.25 Aligned_cols=14 Identities=29% Similarity=0.529 Sum_probs=11.1
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.+-
T Consensus 42 liG~nGsGKSTLl~ 55 (266)
T 4g1u_C 42 IIGPNGAGKSTLLR 55 (266)
T ss_dssp EECCTTSCHHHHHH
T ss_pred EECCCCCcHHHHHH
Confidence 35999999997653
No 276
>1vma_A Cell division protein FTSY; TM0570, structural genomics, JCS protein structure initiative, PSI, joint center for structu genomics; HET: CIT; 1.60A {Thermotoga maritima} SCOP: a.24.13.1 c.37.1.10
Probab=35.30 E-value=4.3 Score=35.74 Aligned_cols=18 Identities=28% Similarity=0.512 Sum_probs=14.3
Q ss_pred hhhhhcccCCCceEeehH
Q psy7226 62 TLLAYGQTGGGKTYTVSA 79 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~G 79 (279)
.|+-.|++|+|||+++.-
T Consensus 106 vi~ivG~~GsGKTTl~~~ 123 (306)
T 1vma_A 106 VIMVVGVNGTGKTTSCGK 123 (306)
T ss_dssp EEEEECCTTSSHHHHHHH
T ss_pred EEEEEcCCCChHHHHHHH
Confidence 456779999999988653
No 277
>4eun_A Thermoresistant glucokinase; putative sugar kinase, enzyme function initiative, EFI, STRU genomics, transferase; 1.60A {Janibacter SP}
Probab=35.27 E-value=4.4 Score=32.67 Aligned_cols=16 Identities=31% Similarity=0.557 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|+.|||||+.+
T Consensus 31 ~i~l~G~~GsGKSTl~ 46 (200)
T 4eun_A 31 HVVVMGVSGSGKTTIA 46 (200)
T ss_dssp EEEEECCTTSCHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3455699999999653
No 278
>3m6a_A ATP-dependent protease LA 1; alpha, beta, ATP-binding, hydrolase, nucleotide-binding, Pro serine protease, stress response; HET: ADP; 3.40A {Bacillus subtilis} PDB: 1x37_A
Probab=35.20 E-value=4.8 Score=38.34 Aligned_cols=16 Identities=38% Similarity=0.366 Sum_probs=13.3
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.++-||++|+|||+.+
T Consensus 110 ~vll~Gp~GtGKTtla 125 (543)
T 3m6a_A 110 ILCLAGPPGVGKTSLA 125 (543)
T ss_dssp EEEEESSSSSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4678999999999654
No 279
>1r6b_X CLPA protein; AAA+, N-terminal domain, CLPS, crystal, binding mechanism, hydrolase; HET: ADP; 2.25A {Escherichia coli} SCOP: a.174.1.1 c.37.1.20 c.37.1.20 PDB: 1ksf_X*
Probab=35.19 E-value=6.6 Score=38.74 Aligned_cols=17 Identities=41% Similarity=0.468 Sum_probs=14.0
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.++-||++|+|||+...
T Consensus 490 ~~ll~G~~GtGKT~la~ 506 (758)
T 1r6b_X 490 SFLFAGPTGVGKTEVTV 506 (758)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCcHHHHHH
Confidence 57889999999996543
No 280
>1lkx_A Myosin IE heavy chain; myosin motor domain, lever ARM, converter domain, contractIle protein; HET: ADP; 3.00A {Dictyostelium discoideum} SCOP: c.37.1.9
Probab=35.10 E-value=8.1 Score=38.13 Aligned_cols=22 Identities=27% Similarity=0.431 Sum_probs=19.6
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 91 ~~~nQsIiisGESGAGKTe~tK 112 (697)
T 1lkx_A 91 SQENQCVIISGESGAGKTEASK 112 (697)
T ss_dssp HCCCEEEEEECSTTSSHHHHHH
T ss_pred cCCCcEEEecCCCCCCchhhHH
Confidence 6899999999999999998743
No 281
>2onk_A Molybdate/tungstate ABC transporter, ATP-binding protein; membrane protein; 3.10A {Archaeoglobus fulgidus} SCOP: c.37.1.12
Probab=34.96 E-value=5.6 Score=33.61 Aligned_cols=14 Identities=36% Similarity=0.629 Sum_probs=10.9
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 28 ~liG~nGsGKSTLl 41 (240)
T 2onk_A 28 VLLGPTGAGKSVFL 41 (240)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999653
No 282
>1w9i_A Myosin II heavy chain; molecular motor, ATPase, motor domain, mutant, muscle contraction; HET: ADP; 1.75A {Dictyostelium discoideum} PDB: 1w9j_A* 1w9l_A* 1w9k_A* 1mma_A* 2aka_A 1d0x_A* 1d0y_A* 1d0z_A* 1d1a_A* 1d1b_A* 1d1c_A* 2xel_A* 1yv3_A* 3bz7_A* 3bz8_A* 3bz9_A* 1jwy_A* 1jx2_A* 3mjx_A* 2jhr_A* ...
Probab=34.57 E-value=8.3 Score=38.48 Aligned_cols=22 Identities=36% Similarity=0.558 Sum_probs=19.7
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 169 ~~~nQsIiisGESGAGKTe~tK 190 (770)
T 1w9i_A 169 DRQNQSLLITGESGAGKTENTK 190 (770)
T ss_dssp HCCCEEEEEECSTTSSHHHHHH
T ss_pred hcCCcEEEEecCCCCcchHHHH
Confidence 5899999999999999998753
No 283
>4ddu_A Reverse gyrase; topoisomerase, DNA supercoiling, archaea, helicase, hydrolas; 3.00A {Thermotoga maritima} PDB: 4ddt_A 4ddv_A 4ddw_A 4ddx_A
Probab=34.38 E-value=10 Score=39.40 Aligned_cols=24 Identities=25% Similarity=0.303 Sum_probs=18.2
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceE
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTY 75 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTy 75 (279)
..+..++.|.+ ++..++||||||.
T Consensus 85 ~ai~~il~g~d--vlv~ApTGSGKTl 108 (1104)
T 4ddu_A 85 LWAKRIVQGKS--FTMVAPTGVGKTT 108 (1104)
T ss_dssp HHHHHHTTTCC--EEECCSTTCCHHH
T ss_pred HHHHHHHcCCC--EEEEeCCCCcHHH
Confidence 34556677876 4677899999998
No 284
>1u94_A RECA protein, recombinase A; homologous recombination, ATPase, DNA repair, DNA binding protein; 1.90A {Escherichia coli} SCOP: c.37.1.11 d.48.1.1 PDB: 1u98_A 1u99_A 1xms_A* 1xmv_A* 2rec_A 2reb_A 1n03_A* 1rea_A 1aa3_A
Probab=34.30 E-value=10 Score=34.00 Aligned_cols=35 Identities=20% Similarity=0.257 Sum_probs=24.6
Q ss_pred hHHhHHhhhc--chh--hhhhhhcccCCCceEeehHHHH
Q psy7226 48 LVPLINHMFN--GIN--ATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 48 ~~plv~~~l~--G~n--~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
.-+-+|.++. |.. ..++.||+.|+|||..+.-++.
T Consensus 47 G~~~LD~~Lg~GGl~~G~ii~I~G~pGsGKTtLal~la~ 85 (356)
T 1u94_A 47 GSLSLDIALGAGGLPMGRIVEIYGPESSGKTTLTLQVIA 85 (356)
T ss_dssp SCHHHHHHTSSSSEETTSEEEEECSTTSSHHHHHHHHHH
T ss_pred CCHHHHHHhccCCccCCeEEEEECCCCCCHHHHHHHHHH
Confidence 4567788775 433 3467889999999987654443
No 285
>2va8_A SSO2462, SKI2-type helicase; hydrolase, DNA repair, ATP-bindin nucleotide-binding; 2.30A {Sulfolobus solfataricus}
Probab=34.28 E-value=9.2 Score=37.32 Aligned_cols=25 Identities=32% Similarity=0.527 Sum_probs=16.7
Q ss_pred hHHh-hhcchhhhhhhhcccCCCceEee
Q psy7226 51 LINH-MFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 51 lv~~-~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
.+.. +.+|.| ++..|+||||||...
T Consensus 38 ~i~~~~~~~~~--~lv~apTGsGKT~~~ 63 (715)
T 2va8_A 38 AVKKGLLEGNR--LLLTSPTGSGKTLIA 63 (715)
T ss_dssp HHHTTTTTTCC--EEEECCTTSCHHHHH
T ss_pred HHHHHhcCCCc--EEEEcCCCCcHHHHH
Confidence 3344 345544 567789999999764
No 286
>2p6r_A Afuhel308 helicase; protein-DNA complex, SF2 helicase, archaeal helicase, DNA repair,, DNA binding protein/DNA complex; 3.00A {Archaeoglobus fulgidus} SCOP: a.4.5.43 a.289.1.2 c.37.1.19 c.37.1.19 PDB: 2p6u_A
Probab=34.27 E-value=5.7 Score=38.77 Aligned_cols=21 Identities=43% Similarity=0.529 Sum_probs=15.3
Q ss_pred hhcchhhhhhhhcccCCCceEee
Q psy7226 55 MFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
+++|.| ++..|+||||||...
T Consensus 37 i~~~~~--~lv~apTGsGKT~~~ 57 (702)
T 2p6r_A 37 VFSGKN--LLLAMPTAAGKTLLA 57 (702)
T ss_dssp HTTCSC--EEEECSSHHHHHHHH
T ss_pred HhCCCc--EEEEcCCccHHHHHH
Confidence 445665 466789999999754
No 287
>1zd8_A GTP:AMP phosphotransferase mitochondrial; ATP:AMP phosphotransferase, myokinase, structural genomics, structural genomics consortium, SGC; 1.48A {Homo sapiens} PDB: 2ak3_A*
Probab=34.25 E-value=5.9 Score=32.53 Aligned_cols=15 Identities=27% Similarity=0.439 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 9 ~I~l~G~~GsGKsT~ 23 (227)
T 1zd8_A 9 RAVIMGAPGSGKGTV 23 (227)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 366779999999964
No 288
>2pt5_A Shikimate kinase, SK; aromatic amino acid biosynthesis, P-loop kinase, SHI kinase, shikimate pathway; 2.10A {Aquifex aeolicus}
Probab=34.19 E-value=5.8 Score=30.56 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=11.2
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 3 I~l~G~~GsGKsT~ 16 (168)
T 2pt5_A 3 IYLIGFMCSGKSTV 16 (168)
T ss_dssp EEEESCTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45679999999954
No 289
>1ex7_A Guanylate kinase; substrate-induced FIT, domain movement, GMP, ATP, substrate specificity, X-RAY diffraction, transferase; HET: 5GP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1ex6_A* 1gky_A* 3sqk_A 4f4j_A
Probab=34.17 E-value=6.8 Score=31.84 Aligned_cols=13 Identities=31% Similarity=0.634 Sum_probs=10.5
Q ss_pred hhhhcccCCCceE
Q psy7226 63 LLAYGQTGGGKTY 75 (279)
Q Consensus 63 i~aYG~tgSGKTy 75 (279)
|+-.|++|+|||.
T Consensus 4 IVi~GPSG~GK~T 16 (186)
T 1ex7_A 4 IVISGPSGTGKST 16 (186)
T ss_dssp EEEECCTTSSHHH
T ss_pred EEEECCCCCCHHH
Confidence 4456999999995
No 290
>2yhs_A FTSY, cell division protein FTSY; cell cycle, protein targeting, simibi class GTPase, GTP-BIND membrane, nucleotide-binding; 1.60A {Escherichia coli} PDB: 2qy9_A 2xxa_B* 1fts_A
Probab=34.08 E-value=6.2 Score=37.36 Aligned_cols=17 Identities=41% Similarity=0.595 Sum_probs=13.2
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.|.-.|++|||||+++.
T Consensus 295 VI~LVGpNGSGKTTLl~ 311 (503)
T 2yhs_A 295 VILMVGVNGVGKTTTIG 311 (503)
T ss_dssp EEEEECCTTSSHHHHHH
T ss_pred EEEEECCCcccHHHHHH
Confidence 45567999999997654
No 291
>2r2a_A Uncharacterized protein; zonular occludens toxin, structural genomics, APC84050.2, PS protein structure initiative; HET: MSE; 1.82A {Neisseria meningitidis MC58}
Probab=33.98 E-value=6 Score=32.43 Aligned_cols=16 Identities=38% Similarity=0.553 Sum_probs=12.4
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
++-.|..|||||+.+.
T Consensus 8 ~l~tG~pGsGKT~~a~ 23 (199)
T 2r2a_A 8 CLITGTPGSGKTLKMV 23 (199)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEEeCCCCCHHHHHH
Confidence 3467999999998643
No 292
>3a4m_A L-seryl-tRNA(SEC) kinase; P-loop motif, walker A motif, ATP binding motif, ATP- binding, nucleotide-binding, transferase; HET: ADP; 1.79A {Methanocaldococcus jannaschii} PDB: 3a4l_A* 3a4n_A 3am1_A* 3add_A* 3adc_A* 3adb_A*
Probab=33.97 E-value=6.1 Score=33.44 Aligned_cols=16 Identities=25% Similarity=0.331 Sum_probs=12.8
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+..|..|||||+..
T Consensus 6 lIvl~G~pGSGKSTla 21 (260)
T 3a4m_A 6 LIILTGLPGVGKSTFS 21 (260)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 4677899999999653
No 293
>1yks_A Genome polyprotein [contains: flavivirin protease NS3 catalytic subunit]; helicase, flavivirus, DEAD-BOX, ATPase, rtpase, hydrolase; 1.80A {Yellow fever virus} SCOP: c.37.1.14 c.37.1.14 PDB: 1ymf_A*
Probab=33.91 E-value=8.3 Score=35.47 Aligned_cols=21 Identities=24% Similarity=0.349 Sum_probs=15.6
Q ss_pred hhcchhhhhhhhcccCCCceEee
Q psy7226 55 MFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
+++|.++ +..|+||||||...
T Consensus 5 l~~g~~v--lv~a~TGSGKT~~~ 25 (440)
T 1yks_A 5 LKKGMTT--VLDFHPGAGKTRRF 25 (440)
T ss_dssp TSTTCEE--EECCCTTSSTTTTH
T ss_pred hhCCCCE--EEEcCCCCCHHHHH
Confidence 3456664 56789999999873
No 294
>1c9k_A COBU, adenosylcobinamide kinase; alpha/beta structure rossmann fold P-loop, transferase; HET: 5GP; 2.20A {Salmonella typhimurium} SCOP: c.37.1.11 PDB: 1cbu_A
Probab=33.89 E-value=7.4 Score=31.56 Aligned_cols=13 Identities=31% Similarity=0.516 Sum_probs=11.0
Q ss_pred hhhhcccCCCceE
Q psy7226 63 LLAYGQTGGGKTY 75 (279)
Q Consensus 63 i~aYG~tgSGKTy 75 (279)
++.+|.+|||||.
T Consensus 2 ilV~Gg~~SGKS~ 14 (180)
T 1c9k_A 2 ILVTGGARSGKSR 14 (180)
T ss_dssp EEEEECTTSSHHH
T ss_pred EEEECCCCCcHHH
Confidence 5678999999993
No 295
>1sgw_A Putative ABC transporter; structural genomics, P protein structure initiative, southeast collaboratory for S genomics, secsg; 1.70A {Pyrococcus furiosus} SCOP: c.37.1.12
Probab=33.84 E-value=5.9 Score=32.87 Aligned_cols=13 Identities=38% Similarity=0.396 Sum_probs=10.3
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-.|++|||||+.|
T Consensus 40 iiG~NGsGKSTLl 52 (214)
T 1sgw_A 40 FHGPNGIGKTTLL 52 (214)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4599999999553
No 296
>3fb4_A Adenylate kinase; psychrophIle, phosphotransferase, ATP-binding, nucleotide-binding, transferase; HET: AP5; 2.00A {Marinibacillus marinus}
Probab=33.75 E-value=6.1 Score=31.96 Aligned_cols=14 Identities=29% Similarity=0.529 Sum_probs=11.1
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|+.|||||+.
T Consensus 3 I~l~G~~GsGKsT~ 16 (216)
T 3fb4_A 3 IVLMGLPGAGKGTQ 16 (216)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 44569999999964
No 297
>1b0u_A Histidine permease; ABC transporter, transport protein; HET: ATP; 1.50A {Salmonella typhimurium} SCOP: c.37.1.12
Probab=33.60 E-value=6.1 Score=33.80 Aligned_cols=13 Identities=31% Similarity=0.585 Sum_probs=10.6
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-.|++|||||+.+
T Consensus 37 liG~nGsGKSTLl 49 (262)
T 1b0u_A 37 IIGSSGSGKSTFL 49 (262)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 3499999999764
No 298
>1ukz_A Uridylate kinase; transferase; HET: ADP AMP; 1.90A {Saccharomyces cerevisiae} SCOP: c.37.1.1 PDB: 1uky_A*
Probab=33.56 E-value=6.2 Score=31.59 Aligned_cols=15 Identities=27% Similarity=0.545 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 17 ~I~l~G~~GsGKsT~ 31 (203)
T 1ukz_A 17 VIFVLGGPGAGKGTQ 31 (203)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466779999999964
No 299
>1g6h_A High-affinity branched-chain amino acid transport ATP-binding protein; beta-core domain; HET: ADP; 1.60A {Methanocaldococcus jannaschii} SCOP: c.37.1.12 PDB: 1gaj_A 1g9x_A*
Probab=33.51 E-value=6.1 Score=33.62 Aligned_cols=14 Identities=36% Similarity=0.657 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 37 ~liG~nGsGKSTLl 50 (257)
T 1g6h_A 37 LIIGPNGSGKSTLI 50 (257)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999764
No 300
>1qf9_A UMP/CMP kinase, protein (uridylmonophosphate/cytidylmonophosphate kinase); nucleoside monophosphate kinase, NMP kinase; HET: ADP C5P; 1.70A {Dictyostelium discoideum} SCOP: c.37.1.1 PDB: 1uke_A* 2ukd_A* 3ukd_A* 4ukd_A* 5ukd_A*
Probab=33.43 E-value=6.1 Score=30.96 Aligned_cols=14 Identities=29% Similarity=0.558 Sum_probs=11.5
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 9 I~l~G~~GsGKsT~ 22 (194)
T 1qf9_A 9 VFVLGGPGSGKGTQ 22 (194)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56679999999964
No 301
>2z43_A DNA repair and recombination protein RADA; archaea, filament, DNA binding, molecular SWI RECA, DMC1; HET: DNA; 1.93A {Sulfolobus solfataricus} PDB: 2bke_A* 2dfl_A* 2zub_A* 2zuc_A* 2zud_A*
Probab=33.30 E-value=10 Score=33.31 Aligned_cols=33 Identities=21% Similarity=0.368 Sum_probs=22.7
Q ss_pred hHHhHHhhhc-chh--hhhhhhcccCCCceEeehHH
Q psy7226 48 LVPLINHMFN-GIN--ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 48 ~~plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~Gi 80 (279)
.-+-+|.++. |.. ..+.-||++|+|||..+.-+
T Consensus 92 G~~~LD~~L~GGl~~G~i~~i~G~~GsGKT~la~~l 127 (324)
T 2z43_A 92 GSQALDGLLAGGIETRTMTEFFGEFGSGKTQLCHQL 127 (324)
T ss_dssp SCHHHHHHTTTSEETTSEEEEEESTTSSHHHHHHHH
T ss_pred CchhHHHhcCCCCCCCcEEEEECCCCCCHhHHHHHH
Confidence 3466777775 332 34678899999999765544
No 302
>1v5w_A DMC1, meiotic recombination protein DMC1/LIM15 homolog; DNA-binding protein, ring protein, octamer, AAA ATPase; 3.20A {Homo sapiens} SCOP: c.37.1.11 PDB: 2zjb_A
Probab=33.30 E-value=9.4 Score=33.87 Aligned_cols=32 Identities=25% Similarity=0.389 Sum_probs=22.1
Q ss_pred HHhHHhhhc-chh--hhhhhhcccCCCceEeehHH
Q psy7226 49 VPLINHMFN-GIN--ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 49 ~plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~Gi 80 (279)
-+-++.++. |.. ..+.-||++|||||..+.-+
T Consensus 108 ~~~LD~~LgGGl~~G~i~~I~G~~GsGKTtla~~l 142 (343)
T 1v5w_A 108 SQEFDKLLGGGIESMAITEAFGEFRTGKTQLSHTL 142 (343)
T ss_dssp CHHHHHHTTSSBCSSEEEEEECCTTCTHHHHHHHH
T ss_pred ChhHHHHhcCCCCCCeEEEEECCCCCCHHHHHHHH
Confidence 455777775 332 34678899999999765543
No 303
>1ji0_A ABC transporter; ATP binding protein, structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; HET: ATP; 2.00A {Thermotoga maritima} SCOP: c.37.1.12
Probab=33.23 E-value=6.1 Score=33.21 Aligned_cols=14 Identities=43% Similarity=0.608 Sum_probs=10.9
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 36 ~l~G~nGsGKSTLl 49 (240)
T 1ji0_A 36 TLIGANGAGKTTTL 49 (240)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999654
No 304
>2c95_A Adenylate kinase 1; transferase, AP4A, nucleotide kinase, transferase ATP-bindi; HET: B4P; 1.71A {Homo sapiens} PDB: 1z83_A* 3adk_A
Probab=33.13 E-value=6.3 Score=31.13 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=12.3
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 11 ~I~l~G~~GsGKsT~ 25 (196)
T 2c95_A 11 IIFVVGGPGSGKGTQ 25 (196)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466779999999964
No 305
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=33.07 E-value=6.3 Score=34.99 Aligned_cols=15 Identities=27% Similarity=0.231 Sum_probs=11.5
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|---|++|||||+++
T Consensus 95 igI~GpsGSGKSTl~ 109 (321)
T 3tqc_A 95 IGIAGSVAVGKSTTS 109 (321)
T ss_dssp EEEECCTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 445599999999653
No 306
>1aky_A Adenylate kinase; ATP:AMP phosphotransferase, myokinase, transferase (phosphotransferase); HET: AP5; 1.63A {Saccharomyces cerevisiae} SCOP: c.37.1.1 g.41.2.1 PDB: 2aky_A* 3aky_A* 1dvr_A*
Probab=32.94 E-value=6.5 Score=32.07 Aligned_cols=15 Identities=27% Similarity=0.510 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 6 ~I~l~G~~GsGKsT~ 20 (220)
T 1aky_A 6 RMVLIGPPGAGKGTQ 20 (220)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 366789999999954
No 307
>1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A
Probab=32.93 E-value=10 Score=39.73 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.7
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 166 ~~~~Q~i~isGeSGaGKTe~~k 187 (1184)
T 1i84_S 166 DREDQSILCTGESGAGKTENTK 187 (1184)
T ss_dssp HTCCEEEECCCSTTSSTTHHHH
T ss_pred cCCCcEEEEecCCCCCccHHHH
Confidence 6899999999999999998753
No 308
>2v26_A Myosin VI; calmodulin-binding, nucleotide-binding, membrane, vanadate, transport, PRE- powerstroke, transition state, protein transport; HET: ADP; 1.75A {Sus scrofa} PDB: 2bki_A 2bkh_A 3l9i_A 2x51_A 2vb6_A* 2vas_A*
Probab=32.85 E-value=9.2 Score=38.26 Aligned_cols=22 Identities=23% Similarity=0.483 Sum_probs=19.7
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 137 ~~~nQsIiiSGESGAGKTe~tK 158 (784)
T 2v26_A 137 LKLSQSIIVSGESGAGKTENTK 158 (784)
T ss_dssp HTCCEEEEEECSTTSSHHHHHH
T ss_pred cCCCcEEEEcCCCCCCceehHH
Confidence 5899999999999999998754
No 309
>3dm5_A SRP54, signal recognition 54 kDa protein; protein-RNA, signal recognition particle, SRP-GTPase, protein targeting, cytoplasm, GTP-binding; HET: GDP; 2.51A {Pyrococcus furiosus}
Probab=32.75 E-value=8 Score=36.00 Aligned_cols=23 Identities=39% Similarity=0.498 Sum_probs=17.9
Q ss_pred hhhhhhhcccCCCceEeehHHHH
Q psy7226 60 NATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
...|+..|++|+|||+|+..|..
T Consensus 100 p~vIlivG~~G~GKTTt~~kLA~ 122 (443)
T 3dm5_A 100 PTILLMVGIQGSGKTTTVAKLAR 122 (443)
T ss_dssp SEEEEEECCTTSSHHHHHHHHHH
T ss_pred CeEEEEECcCCCCHHHHHHHHHH
Confidence 34667789999999999776653
No 310
>4db1_A Myosin-7; S1DC, cardiac, beta isoform, MYH7, myhcb, MYHC-beta, contractIle protein; HET: ANP; 2.60A {Homo sapiens} PDB: 2w4a_M 2w4g_M 2w4h_M 2mys_A* 1m8q_A* 1mvw_A* 1o18_A* 1o19_A* 1o1a_A* 1o1b_A* 1o1c_A* 1o1d_A* 1o1e_A* 1o1f_A* 1o1g_A*
Probab=32.73 E-value=9.3 Score=38.23 Aligned_cols=22 Identities=32% Similarity=0.552 Sum_probs=19.7
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 168 ~~~nQsIiiSGESGAGKTe~tK 189 (783)
T 4db1_A 168 DRENQSILITGESGAGKTVNTK 189 (783)
T ss_dssp HTCCEEEEEECSTTSSHHHHHH
T ss_pred hCCCceEEEeCCCCCCCchHHH
Confidence 6899999999999999998754
No 311
>1kk8_A Myosin heavy chain, striated muscle; actin-detached, mechanics of motor, contractIle PROT; HET: ADP; 2.30A {Argopecten irradians} SCOP: b.34.3.1 c.37.1.9 PDB: 1kk7_A* 1qvi_A* 1s5g_A* 1sr6_A 1b7t_A* 1kqm_A* 1kwo_A* 1l2o_A* 1dfl_A* 2w4t_C 2w4v_C 2w4w_C 1dfk_A 2ec6_A 2otg_A* 2os8_A* 2ovk_A 2ekv_A 2ekw_A 2oy6_A* ...
Probab=32.67 E-value=9.1 Score=38.58 Aligned_cols=22 Identities=32% Similarity=0.463 Sum_probs=19.6
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 166 ~~~nQsIiiSGESGAGKTe~tK 187 (837)
T 1kk8_A 166 DRENQSCLITGESGAGKTENTK 187 (837)
T ss_dssp HTSEEEEEEECSTTSSHHHHHH
T ss_pred cCCCcEEEEeCCCCCCchhhHH
Confidence 5899999999999999998743
No 312
>2ff7_A Alpha-hemolysin translocation ATP-binding protein HLYB; ABC-transporter, transport protein; HET: ADP; 1.60A {Escherichia coli} SCOP: c.37.1.12 PDB: 2ffb_A* 2fgk_A* 2ffa_A* 2fgj_A* 2pmk_A* 3b5j_A* 1mt0_A 1xef_A*
Probab=32.64 E-value=6.4 Score=33.33 Aligned_cols=14 Identities=29% Similarity=0.439 Sum_probs=11.1
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 39 ~i~G~nGsGKSTLl 52 (247)
T 2ff7_A 39 GIVGRSGSGKSTLT 52 (247)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999764
No 313
>3l9o_A ATP-dependent RNA helicase DOB1; REC-A fold, winged-helix-turn-helix, antiparallel-coiled-COI domain, ATP-binding, helicase, hydrolase; 3.39A {Saccharomyces cerevisiae}
Probab=32.64 E-value=9.5 Score=39.68 Aligned_cols=26 Identities=27% Similarity=0.296 Sum_probs=19.1
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
...+..+..|.+ ++..|+||||||..
T Consensus 190 ~~AI~~i~~g~d--vLV~ApTGSGKTlv 215 (1108)
T 3l9o_A 190 DTAISCIDRGES--VLVSAHTSAGKTVV 215 (1108)
T ss_dssp HHHHHHHTTTCC--EEEECCSSSHHHHH
T ss_pred HHHHHHHHcCCC--EEEECCCCCChHHH
Confidence 345566677766 47789999999965
No 314
>2v3c_C SRP54, signal recognition 54 kDa protein; nucleotide-binding, signal recognition particle, GTP-binding, RNA-binding; 2.50A {Methanocaldococcus jannaschii} PDB: 3ndb_B
Probab=32.58 E-value=10 Score=35.01 Aligned_cols=23 Identities=30% Similarity=0.400 Sum_probs=17.7
Q ss_pred hhhhhcccCCCceEeehHHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
.|+..|++|+|||+++..|....
T Consensus 101 vI~ivG~~GvGKTTla~~La~~l 123 (432)
T 2v3c_C 101 VILLVGIQGSGKTTTAAKLARYI 123 (432)
T ss_dssp CEEEECCSSSSTTHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 56678999999999877665443
No 315
>2fna_A Conserved hypothetical protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE ADP; 2.00A {Sulfolobus solfataricus} SCOP: a.4.5.11 c.37.1.20
Probab=32.57 E-value=8.5 Score=33.26 Aligned_cols=20 Identities=20% Similarity=0.217 Sum_probs=15.8
Q ss_pred hhhhhhcccCCCceEeehHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gi 80 (279)
..++-+|+.|+|||..+.-+
T Consensus 31 ~~v~i~G~~G~GKT~L~~~~ 50 (357)
T 2fna_A 31 PITLVLGLRRTGKSSIIKIG 50 (357)
T ss_dssp SEEEEEESTTSSHHHHHHHH
T ss_pred CcEEEECCCCCCHHHHHHHH
Confidence 47888999999999765433
No 316
>1cke_A CK, MSSA, protein (cytidine monophosphate kinase); nucleotide monophosphate kinase,, transferase; 1.75A {Escherichia coli} SCOP: c.37.1.1 PDB: 1kdo_A* 1kdp_A* 1kdr_A* 1kdt_A* 2cmk_A* 2fem_A 2feo_A*
Probab=32.49 E-value=8.1 Score=31.38 Aligned_cols=14 Identities=29% Similarity=0.439 Sum_probs=11.2
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.--|++|||||+.
T Consensus 8 i~i~G~~GsGKSTl 21 (227)
T 1cke_A 8 ITIDGPSGAGKGTL 21 (227)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45569999999954
No 317
>3otd_A TRNA(His) guanylyltransferase; polymerase-like PALM domain, catalytic carboxylates; 2.28A {Homo sapiens} PDB: 3otc_A 3otb_A 3ote_A
Probab=32.39 E-value=8.3 Score=33.34 Aligned_cols=53 Identities=15% Similarity=0.286 Sum_probs=35.2
Q ss_pred eEEEEeeceeEe-eecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccC
Q psy7226 18 KIWLFFDHQVFI-FDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTG 70 (279)
Q Consensus 18 ~~~~~~~~~~f~-FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tg 70 (279)
=+.+++|++.|. |-+.++-.-..++-+..++......++.-++.+++|||++-
T Consensus 23 ~iVVRiDGr~F~kfs~~~~F~KPnD~r~l~lM~~aA~~lm~~~~~i~~aYg~SD 76 (269)
T 3otd_A 23 WVVVRLDGRNFHRFAEKHNFAKPNDSRALQLMTKCAQTVMEELEDIVIAYGQSD 76 (269)
T ss_dssp EEEEEEEETTHHHHHHHTTCCSSCCHHHHHHHHHHHHHHHHHSSSEEEEEEETT
T ss_pred eEEEEEeCCccchhhhhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCc
Confidence 388888888663 44444334444555555555555666777888899999975
No 318
>2cbz_A Multidrug resistance-associated protein 1; ABC proteins, MRP1/ABCC1, nucleotide-binding domain, ATP- binding, hydrolysis, transport; HET: ATP; 1.5A {Homo sapiens}
Probab=32.31 E-value=6.5 Score=33.02 Aligned_cols=14 Identities=36% Similarity=0.515 Sum_probs=11.1
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 35 ~i~G~nGsGKSTLl 48 (237)
T 2cbz_A 35 AVVGQVGCGKSSLL 48 (237)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 44699999999654
No 319
>1mv5_A LMRA, multidrug resistance ABC transporter ATP-binding and permease protein; asymmetric dimer, tetramer, P-glycoprotein; HET: ATP ADP; 3.10A {Lactococcus lactis} SCOP: c.37.1.12
Probab=32.29 E-value=6.5 Score=33.08 Aligned_cols=14 Identities=36% Similarity=0.579 Sum_probs=10.7
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 32 ~i~G~nGsGKSTLl 45 (243)
T 1mv5_A 32 AFAGPSGGGKSTIF 45 (243)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999653
No 320
>3kl4_A SRP54, signal recognition 54 kDa protein; signal recognition particle, SRP, SRP54, FFH, signal sequenc peptide; 3.50A {Sulfolobus solfataricus} PDB: 1qzx_A 1qzw_A
Probab=32.20 E-value=9.4 Score=35.36 Aligned_cols=21 Identities=29% Similarity=0.438 Sum_probs=15.7
Q ss_pred hhhhhhcccCCCceEeehHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii 81 (279)
..|+..|++|+|||+|+..|.
T Consensus 98 ~vI~lvG~~GsGKTTt~~kLA 118 (433)
T 3kl4_A 98 FIIMLVGVQGSGKTTTAGKLA 118 (433)
T ss_dssp EEEEECCCTTSCHHHHHHHHH
T ss_pred eEEEEECCCCCCHHHHHHHHH
Confidence 345566999999998876444
No 321
>3auy_A DNA double-strand break repair RAD50 ATPase; DNA repair, ABC transporter ATPase domain-like; HET: DNA ADP; 2.70A {Methanocaldococcus jannaschii} PDB: 3aux_A* 3av0_B*
Probab=32.09 E-value=9.7 Score=34.09 Aligned_cols=13 Identities=31% Similarity=0.562 Sum_probs=10.5
Q ss_pred hhhcccCCCceEe
Q psy7226 64 LAYGQTGGGKTYT 76 (279)
Q Consensus 64 ~aYG~tgSGKTyT 76 (279)
+-+|+||+|||..
T Consensus 29 vi~G~NGaGKT~i 41 (371)
T 3auy_A 29 AIIGENGSGKSSI 41 (371)
T ss_dssp EEEECTTSSHHHH
T ss_pred EEECCCCCCHHHH
Confidence 4569999999944
No 322
>3fvq_A Fe(3+) IONS import ATP-binding protein FBPC; nucleotide binding domain, ABC motor domain, ferric iron TRA ATP-binding, cell inner membrane; HET: ATP; 1.90A {Neisseria gonorrhoeae}
Probab=32.08 E-value=6.6 Score=35.46 Aligned_cols=14 Identities=36% Similarity=0.518 Sum_probs=11.4
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+++-
T Consensus 35 llGpsGsGKSTLLr 48 (359)
T 3fvq_A 35 IIGASGCGKTTLLR 48 (359)
T ss_dssp EEESTTSSHHHHHH
T ss_pred EECCCCchHHHHHH
Confidence 46999999997753
No 323
>3dl0_A Adenylate kinase; phosphotransferase, zinc coordination, ATP-binding, binding, nucleotide biosynthesis, nucleotide-binding, trans; HET: AP5; 1.58A {Bacillus subtilis} PDB: 1p3j_A* 2ori_A* 2eu8_A* 2oo7_A* 2p3s_A* 2qaj_A* 2osb_A* 3dkv_A* 1zin_A* 1zio_A* 1zip_A* 1s3g_A*
Probab=31.94 E-value=6.8 Score=31.72 Aligned_cols=14 Identities=36% Similarity=0.558 Sum_probs=11.0
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|+.|||||+.
T Consensus 3 I~l~G~~GsGKsT~ 16 (216)
T 3dl0_A 3 LVLMGLPGAGKGTQ 16 (216)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 44569999999964
No 324
>2i1q_A DNA repair and recombination protein RADA; ATPase, recombinase, ATP complex, calcium stimulation, RECA, DMC1; HET: DNA ANP; 1.90A {Methanococcus voltae} SCOP: a.60.4.1 c.37.1.11 PDB: 1xu4_A* 2b21_A* 2fpk_A* 2fpl_A* 2fpm_A* 1t4g_A* 3fyh_A* 2f1j_A* 2f1i_A* 2f1h_A* 3ntu_A* 3ewa_A* 3ew9_A* 3etl_A* 4dc9_A* 2gdj_A*
Probab=31.86 E-value=11 Score=32.92 Aligned_cols=34 Identities=18% Similarity=0.244 Sum_probs=23.8
Q ss_pred hHHhHHhhhc-chh--hhhhhhcccCCCceEeehHHH
Q psy7226 48 LVPLINHMFN-GIN--ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 48 ~~plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~Gii 81 (279)
.-+-+|.++. |.. ..++-||++|+|||..+.-++
T Consensus 83 G~~~LD~~l~GGl~~g~i~~i~G~~gsGKT~la~~la 119 (322)
T 2i1q_A 83 SSSELDSVLGGGLESQSVTEFAGVFGSGKTQIMHQSC 119 (322)
T ss_dssp SCHHHHHHTTSSEETTEEEEEEESTTSSHHHHHHHHH
T ss_pred CChhHHHhcCCCccCCeEEEEECCCCCCHHHHHHHHH
Confidence 4567788885 332 356788999999997655443
No 325
>2pze_A Cystic fibrosis transmembrane conductance regulat; NBD, ABC transporter, CFTR, hydrolase; HET: ATP; 1.70A {Homo sapiens} PDB: 2pzg_A* 2pzf_A* 1ckx_A 1cky_A 1ckw_A 1ckz_A
Probab=31.84 E-value=6.7 Score=32.72 Aligned_cols=14 Identities=43% Similarity=0.572 Sum_probs=10.9
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 38 ~i~G~nGsGKSTLl 51 (229)
T 2pze_A 38 AVAGSTGAGKTSLL 51 (229)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999654
No 326
>3rlf_A Maltose/maltodextrin import ATP-binding protein M; integral membrane protein, ATPase, ABC transporter, membrane transmembrane; HET: UMQ MAL PGV ANP; 2.20A {Escherichia coli} PDB: 1q1e_A 1q12_A* 2awo_A* 3fh6_A 3puv_A* 3puw_A* 3pux_A* 3puy_A* 3puz_A* 3pv0_A* 2awn_A* 2r6g_A* 1q1b_A
Probab=31.84 E-value=6.8 Score=35.69 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=11.6
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||++|-
T Consensus 34 llGpsGsGKSTLLr 47 (381)
T 3rlf_A 34 FVGPSGCGKSTLLR 47 (381)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EEcCCCchHHHHHH
Confidence 46999999998763
No 327
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=31.81 E-value=5.9 Score=31.50 Aligned_cols=16 Identities=25% Similarity=0.364 Sum_probs=12.5
Q ss_pred hhhhhhcccCCCceEe
Q psy7226 61 ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyT 76 (279)
-.|.-.|++|||||+.
T Consensus 9 ~~I~i~G~~GsGKST~ 24 (203)
T 1uf9_A 9 IIIGITGNIGSGKSTV 24 (203)
T ss_dssp EEEEEEECTTSCHHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 3466679999999954
No 328
>4a2w_A RIG-I, retinoic acid inducible protein I; hydrolase, superfamily 2 RNA helicase, ATP and dsRNA binding antiviral signalling pathway; 3.70A {Anas platyrhynchos}
Probab=31.78 E-value=12 Score=38.15 Aligned_cols=26 Identities=42% Similarity=0.590 Sum_probs=18.8
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEee
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
..+..++.|.++ +..++||||||.+.
T Consensus 255 ~ai~~il~g~~~--ll~a~TGsGKTl~~ 280 (936)
T 4a2w_A 255 ELAQPAINGKNA--LICAPTGSGKTFVS 280 (936)
T ss_dssp HHHHHHHTTCCE--EEECCTTSCHHHHH
T ss_pred HHHHHHHcCCCE--EEEeCCCchHHHHH
Confidence 345566788774 55689999999763
No 329
>1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1
Probab=31.77 E-value=9.7 Score=39.21 Aligned_cols=22 Identities=36% Similarity=0.558 Sum_probs=19.7
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 169 ~~~~QsIiisGESGAGKTe~~K 190 (1010)
T 1g8x_A 169 DRQNQSLLITGESGAGKTENTK 190 (1010)
T ss_dssp HTCCEEEEEEESTTSSHHHHHH
T ss_pred cCCCeEEEEeCCCCCCcchHHH
Confidence 6899999999999999998853
No 330
>3a8t_A Adenylate isopentenyltransferase; rossmann fold protein; HET: ATP; 2.37A {Humulus lupulus}
Probab=31.73 E-value=8.6 Score=34.48 Aligned_cols=15 Identities=40% Similarity=0.572 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|+||||||..
T Consensus 42 lIvI~GPTgsGKTtL 56 (339)
T 3a8t_A 42 LLVLMGATGTGKSRL 56 (339)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred eEEEECCCCCCHHHH
Confidence 467779999999943
No 331
>1vpl_A ABC transporter, ATP-binding protein; TM0544, structural GENO joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.10A {Thermotoga maritima} SCOP: c.37.1.12
Probab=31.70 E-value=6.8 Score=33.43 Aligned_cols=14 Identities=43% Similarity=0.634 Sum_probs=11.1
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.+-
T Consensus 46 l~G~NGsGKSTLlk 59 (256)
T 1vpl_A 46 LIGPNGAGKTTTLR 59 (256)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EECCCCCCHHHHHH
Confidence 45999999997653
No 332
>3sr0_A Adenylate kinase; phosphoryl transfer analogue, ALF4, transferase (phosphotran phosphoryl transfer, nucleotide-binding; HET: ADP AMP; 1.56A {Aquifex aeolicus} PDB: 2rh5_A 2rgx_A*
Probab=31.54 E-value=7 Score=32.17 Aligned_cols=14 Identities=36% Similarity=0.570 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|+.||||++-
T Consensus 3 Iil~GpPGsGKgTq 16 (206)
T 3sr0_A 3 LVFLGPPGAGKGTQ 16 (206)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45679999999854
No 333
>1w7j_A Myosin VA; motor protein, unconventional myosin, myosin V, chicken, molecular motor, ATPase, ELC, IQ motif, muscle protein, ATP-binding; HET: ADP; 2A {Gallus gallus} SCOP: b.34.3.1 c.37.1.9 PDB: 1w7i_A* 1oe9_A* 1w8j_A
Probab=31.40 E-value=10 Score=38.05 Aligned_cols=22 Identities=27% Similarity=0.572 Sum_probs=19.6
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 153 ~~~nQsIiisGESGAGKTe~tK 174 (795)
T 1w7j_A 153 DERNQSIIVSGESGAGKTVSAK 174 (795)
T ss_dssp HTCCEEEEEECSTTSSHHHHHH
T ss_pred cCCCeEEEEeCCCCCCcchHHH
Confidence 5899999999999999998753
No 334
>1sq5_A Pantothenate kinase; P-loop, transferase; HET: PAU ADP; 2.20A {Escherichia coli} SCOP: c.37.1.6 PDB: 1esm_A* 1esn_A*
Probab=31.39 E-value=6.9 Score=34.13 Aligned_cols=16 Identities=25% Similarity=0.275 Sum_probs=11.8
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|--.|++|||||+.+
T Consensus 82 iigI~G~~GsGKSTl~ 97 (308)
T 1sq5_A 82 IISIAGSVAVGKSTTA 97 (308)
T ss_dssp EEEEEECTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3445599999999653
No 335
>1g41_A Heat shock protein HSLU; AAA-ATPase, CLPY, ATP-dependent proteolysis, chaperone; HET: ADP; 2.30A {Haemophilus influenzae} SCOP: c.37.1.20 PDB: 1g3i_A* 1im2_A* 1kyi_A* 1g4a_E* 1g4b_E 1yyf_A* 1do0_A* 1do2_A* 1e94_E* 1hqy_E* 1ht1_E* 1ht2_E*
Probab=31.34 E-value=7.3 Score=36.25 Aligned_cols=17 Identities=41% Similarity=0.526 Sum_probs=14.0
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..|+-||++|+|||+..
T Consensus 51 ~~iLl~GppGtGKT~la 67 (444)
T 1g41_A 51 KNILMIGPTGVGKTEIA 67 (444)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred ceEEEEcCCCCCHHHHH
Confidence 34888999999999753
No 336
>1z63_A Helicase of the SNF2/RAD54 hamily; protein-DNA complex, hydrolase/DNA complex complex; 3.00A {Sulfolobus solfataricus} SCOP: c.37.1.19 c.37.1.19 PDB: 1z6a_A
Probab=31.33 E-value=13 Score=34.20 Aligned_cols=22 Identities=32% Similarity=0.335 Sum_probs=15.2
Q ss_pred hhhhhhcccCCCceEeehHHHHH
Q psy7226 61 ATLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm~Gii~r 83 (279)
.+|+| -++|+|||.++..++..
T Consensus 58 ~~ila-d~~GlGKT~~ai~~i~~ 79 (500)
T 1z63_A 58 GICLA-DDMGLGKTLQTIAVFSD 79 (500)
T ss_dssp CEEEC-CCTTSCHHHHHHHHHHH
T ss_pred CEEEE-eCCCCcHHHHHHHHHHH
Confidence 34554 68999999986655443
No 337
>3crm_A TRNA delta(2)-isopentenylpyrophosphate transferase; ATP-binding, nucleotide-binding, nucleotidyltransferase, tRNA processing; 1.90A {Pseudomonas aeruginosa} PDB: 3crq_A 3crr_A
Probab=31.29 E-value=8.8 Score=34.14 Aligned_cols=15 Identities=33% Similarity=0.492 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|+||||||..
T Consensus 7 ~i~i~GptGsGKTtl 21 (323)
T 3crm_A 7 AIFLMGPTAAGKTDL 21 (323)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466789999999964
No 338
>1pzn_A RAD51, DNA repair and recombination protein RAD51, RADA; heptameric ring, heptamer, ring, oligomer, RAD51 polymerizat motif; HET: DNA; 2.85A {Pyrococcus furiosus} SCOP: a.60.4.1 c.37.1.11
Probab=31.20 E-value=11 Score=33.73 Aligned_cols=31 Identities=23% Similarity=0.373 Sum_probs=20.8
Q ss_pred hHHhHHhhhcc---hhhhhhhhcccCCCceEeeh
Q psy7226 48 LVPLINHMFNG---INATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 48 ~~plv~~~l~G---~n~~i~aYG~tgSGKTyTm~ 78 (279)
..+-+|.++.| ....+.-+|++|||||..+.
T Consensus 116 G~~~LD~lL~ggi~~G~i~~I~G~~GsGKTTL~~ 149 (349)
T 1pzn_A 116 GSKSLDKLLGGGIETQAITEVFGEFGSGKTQLAH 149 (349)
T ss_dssp SCHHHHHHHTSSEESSEEEEEEESTTSSHHHHHH
T ss_pred CCHHHHHHhcCCCCCCeEEEEECCCCCCHHHHHH
Confidence 34566777653 22356678999999996543
No 339
>2yz2_A Putative ABC transporter ATP-binding protein TM_0; cobalt transport, TM02 hydrolase, inner membrane, membrane, nucleotide-binding; 2.30A {Thermotoga maritima}
Probab=31.15 E-value=7 Score=33.43 Aligned_cols=15 Identities=40% Similarity=0.640 Sum_probs=11.5
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|++|||||+.+-
T Consensus 37 ~liG~nGsGKSTLl~ 51 (266)
T 2yz2_A 37 LVAGNTGSGKSTLLQ 51 (266)
T ss_dssp EEECSTTSSHHHHHH
T ss_pred EEECCCCCcHHHHHH
Confidence 345999999997653
No 340
>3foz_A TRNA delta(2)-isopentenylpyrophosphate transferas; nucleoside modification, isopentenyl-tRNA transferase, transferase-RNA complex; 2.50A {Escherichia coli k-12} PDB: 2zxu_A* 2zm5_A
Probab=31.05 E-value=8.9 Score=34.04 Aligned_cols=15 Identities=33% Similarity=0.503 Sum_probs=11.9
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|+||||||..
T Consensus 12 ~i~i~GptgsGKt~l 26 (316)
T 3foz_A 12 AIFLMGPTASGKTAL 26 (316)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCccCHHHH
Confidence 356679999999954
No 341
>3umf_A Adenylate kinase; rossmann fold, transferase; 2.05A {Schistosoma mansoni}
Probab=31.00 E-value=7.4 Score=32.44 Aligned_cols=15 Identities=27% Similarity=0.543 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|+.||||++-
T Consensus 31 iI~llGpPGsGKgTq 45 (217)
T 3umf_A 31 VIFVLGGPGSGKGTQ 45 (217)
T ss_dssp EEEEECCTTCCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 367789999999854
No 342
>2ycu_A Non muscle myosin 2C, alpha-actinin; motor protein; HET: AOV; 2.25A {Homo sapiens} PDB: 1br1_A* 1br4_A* 1br2_A*
Probab=30.86 E-value=11 Score=38.85 Aligned_cols=22 Identities=27% Similarity=0.524 Sum_probs=19.6
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 143 ~~~~QsIiisGESGAGKTe~~K 164 (995)
T 2ycu_A 143 DREDQSILCTGESGAGKTENTK 164 (995)
T ss_dssp HCCCEEEEEECBTTSSHHHHHH
T ss_pred cCCCcEEEecCCCCCCchhhHH
Confidence 6899999999999999998744
No 343
>2yyz_A Sugar ABC transporter, ATP-binding protein; sugar transport, alpha and beta proteins (A/B) TM0421, structural genomics, NPPSFA; 2.11A {Thermotoga maritima}
Probab=30.86 E-value=7.2 Score=35.17 Aligned_cols=14 Identities=43% Similarity=0.570 Sum_probs=11.5
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.|-
T Consensus 34 llGpnGsGKSTLLr 47 (359)
T 2yyz_A 34 LLGPSGCGKTTTLL 47 (359)
T ss_dssp EECSTTSSHHHHHH
T ss_pred EEcCCCchHHHHHH
Confidence 45999999998753
No 344
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=30.84 E-value=7.2 Score=33.45 Aligned_cols=14 Identities=29% Similarity=0.598 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 54 ~liG~NGsGKSTLl 67 (263)
T 2olj_A 54 VVIGPSGSGKSTFL 67 (263)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEEcCCCCcHHHHH
Confidence 34599999999664
No 345
>2qmh_A HPR kinase/phosphorylase; V267F mutation, ATP-binding, carbohydrate metabolism, magnesium, metal-binding, multifunctional enzyme; 2.60A {Lactobacillus casei} PDB: 1jb1_A 1kkl_A 1kkm_A*
Probab=30.77 E-value=7.7 Score=32.23 Aligned_cols=21 Identities=29% Similarity=0.346 Sum_probs=14.8
Q ss_pred cchhhhhhhhcccCCCceEee
Q psy7226 57 NGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm 77 (279)
+-+...|+-.|+||+|||...
T Consensus 31 ~~~g~~ilI~GpsGsGKStLA 51 (205)
T 2qmh_A 31 DIYGLGVLITGDSGVGKSETA 51 (205)
T ss_dssp EETTEEEEEECCCTTTTHHHH
T ss_pred EECCEEEEEECCCCCCHHHHH
Confidence 333445677799999999553
No 346
>2d2e_A SUFC protein; ABC-ATPase, SUF protein, 310-helix, riken structural genomics/proteomics initiative, RSGI, structural genomics, binding; 1.70A {Thermus thermophilus} PDB: 2d2f_A*
Probab=30.65 E-value=7.2 Score=32.99 Aligned_cols=14 Identities=29% Similarity=0.387 Sum_probs=10.9
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 33 ~l~G~nGsGKSTLl 46 (250)
T 2d2e_A 33 ALMGPNGAGKSTLG 46 (250)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999653
No 347
>2yvu_A Probable adenylyl-sulfate kinase; transferase, structural genomics, NPPSFA, national P protein structural and functional analyses; 2.10A {Aeropyrum pernix}
Probab=30.64 E-value=7.4 Score=30.73 Aligned_cols=15 Identities=33% Similarity=0.443 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 15 ~i~l~G~~GsGKsT~ 29 (186)
T 2yvu_A 15 VVWLTGLPGSGKTTI 29 (186)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEEcCCCCCHHHH
Confidence 456679999999964
No 348
>2ghi_A Transport protein; multidrug resistance protein, MDR, structural genomics, structural genomics consortium, SGC; 2.20A {Plasmodium yoelii yoelii str}
Probab=30.55 E-value=7.3 Score=33.24 Aligned_cols=15 Identities=33% Similarity=0.472 Sum_probs=11.4
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
+.-.|++|||||+.+
T Consensus 49 ~~i~G~nGsGKSTLl 63 (260)
T 2ghi_A 49 CALVGHTGSGKSTIA 63 (260)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 345699999999654
No 349
>3k1j_A LON protease, ATP-dependent protease LON; ATP-binding, nucleotide-binding, Pro hydrolase; HET: ADP PE8; 2.00A {Thermococcus onnurineus}
Probab=30.44 E-value=9.3 Score=36.74 Aligned_cols=23 Identities=22% Similarity=0.245 Sum_probs=16.2
Q ss_pred hhhcchhhhhhhhcccCCCceEeeh
Q psy7226 54 HMFNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 54 ~~l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
.+-.|. .++-+|++|+|||+.+.
T Consensus 56 ~i~~g~--~vll~Gp~GtGKTtlar 78 (604)
T 3k1j_A 56 AANQKR--HVLLIGEPGTGKSMLGQ 78 (604)
T ss_dssp HHHTTC--CEEEECCTTSSHHHHHH
T ss_pred cccCCC--EEEEEeCCCCCHHHHHH
Confidence 334453 56778999999996543
No 350
>2j9r_A Thymidine kinase; TK1, DNK, lasso, transferase, ATP-binding, deoxyribonucleoside kinase, DNA synthesis, phosphate accept nucleotide-binding; HET: THM; 2.7A {Bacillus anthracis} PDB: 2ja1_A*
Probab=30.43 E-value=10 Score=31.66 Aligned_cols=24 Identities=17% Similarity=0.137 Sum_probs=18.6
Q ss_pred hhhhhcccCCCceEeehHHHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
..+-||.-|||||..+.+++.|+.
T Consensus 30 l~vitG~MgsGKTT~lL~~a~r~~ 53 (214)
T 2j9r_A 30 IEVICGSMFSGKSEELIRRVRRTQ 53 (214)
T ss_dssp EEEEECSTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHH
Confidence 346789999999988777766653
No 351
>2cdn_A Adenylate kinase; phosphoryl transfer, associative mechanism, ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase; HET: ADP; 1.9A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1p4s_A
Probab=30.40 E-value=7.5 Score=31.11 Aligned_cols=16 Identities=31% Similarity=0.503 Sum_probs=13.0
Q ss_pred hhhhhhcccCCCceEe
Q psy7226 61 ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyT 76 (279)
..|+-.|..|||||+.
T Consensus 21 ~~I~l~G~~GsGKST~ 36 (201)
T 2cdn_A 21 MRVLLLGPPGAGKGTQ 36 (201)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred eEEEEECCCCCCHHHH
Confidence 3577789999999964
No 352
>1z47_A CYSA, putative ABC-transporter ATP-binding protein; alpha/beta motif, beta sandwich, ligand binding protein; 1.90A {Alicyclobacillus acidocaldarius}
Probab=30.40 E-value=7.4 Score=35.05 Aligned_cols=14 Identities=36% Similarity=0.598 Sum_probs=11.4
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.+-
T Consensus 46 llGpnGsGKSTLLr 59 (355)
T 1z47_A 46 LLGPSGSGKTTILR 59 (355)
T ss_dssp EECSTTSSHHHHHH
T ss_pred EECCCCCcHHHHHH
Confidence 45999999998753
No 353
>2plr_A DTMP kinase, probable thymidylate kinase; TMP-binding, ATP-binding, structural GEN NPPSFA; HET: 1PE PGE EPE PG4; 1.60A {Sulfolobus tokodaii}
Probab=30.31 E-value=7.6 Score=30.99 Aligned_cols=16 Identities=25% Similarity=0.345 Sum_probs=12.5
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+-.|..|||||+..
T Consensus 6 ~I~i~G~~GsGKsT~~ 21 (213)
T 2plr_A 6 LIAFEGIDGSGKSSQA 21 (213)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEEcCCCCCHHHHH
Confidence 3566799999999653
No 354
>1pjr_A PCRA; DNA repair, DNA replication, SOS response, helicase, ATP- binding, DNA-binding; 2.50A {Geobacillus stearothermophilus} SCOP: c.37.1.19 c.37.1.19 PDB: 1qhg_A* 3pjr_A* 2pjr_A* 1qhh_B* 1qhh_D* 1qhh_A* 1qhh_C* 2pjr_B*
Probab=30.27 E-value=11 Score=37.14 Aligned_cols=19 Identities=32% Similarity=0.517 Sum_probs=14.7
Q ss_pred hhhhhhhcccCCCceEeeh
Q psy7226 60 NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~ 78 (279)
+..++..|..|||||++|.
T Consensus 24 ~g~~lV~AgAGSGKT~vL~ 42 (724)
T 1pjr_A 24 EGPLLIMAGAGSGKTRVLT 42 (724)
T ss_dssp SSCEEEEECTTSCHHHHHH
T ss_pred CCCEEEEEcCCCCHHHHHH
Confidence 3455666889999999975
No 355
>2pbr_A DTMP kinase, thymidylate kinase; transferase, nucleotide biosynthesis, TMP-binding, A binding, structural genomics, NPPSFA; 1.96A {Aquifex aeolicus}
Probab=30.24 E-value=7.5 Score=30.52 Aligned_cols=14 Identities=36% Similarity=0.446 Sum_probs=10.9
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|..|||||+.
T Consensus 3 I~l~G~~GsGKsT~ 16 (195)
T 2pbr_A 3 IAFEGIDGSGKTTQ 16 (195)
T ss_dssp EEEECSTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 44569999999954
No 356
>2nq2_C Hypothetical ABC transporter ATP-binding protein HI1470; putative iron chelatin ABC transporter, nucleotide binding domain; 2.40A {Haemophilus influenzae}
Probab=30.20 E-value=7.5 Score=33.03 Aligned_cols=15 Identities=33% Similarity=0.528 Sum_probs=11.4
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|++|||||+.+-
T Consensus 35 ~l~G~nGsGKSTLl~ 49 (253)
T 2nq2_C 35 AVLGQNGCGKSTLLD 49 (253)
T ss_dssp EEECCSSSSHHHHHH
T ss_pred EEECCCCCCHHHHHH
Confidence 345999999996543
No 357
>2if2_A Dephospho-COA kinase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 3.00A {Aquifex aeolicus}
Probab=30.15 E-value=7.6 Score=31.07 Aligned_cols=14 Identities=29% Similarity=0.382 Sum_probs=10.9
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|..|||||+.
T Consensus 4 i~i~G~~GsGKSTl 17 (204)
T 2if2_A 4 IGLTGNIGCGKSTV 17 (204)
T ss_dssp EEEEECTTSSHHHH
T ss_pred EEEECCCCcCHHHH
Confidence 44569999999954
No 358
>2jaq_A Deoxyguanosine kinase; transferase, deoxyribonucleoside kinase; HET: DCP; 2.3A {Mycoplasma mycoides subsp} PDB: 2jat_A* 2jas_A*
Probab=30.09 E-value=7.6 Score=30.76 Aligned_cols=14 Identities=29% Similarity=0.676 Sum_probs=10.8
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|..|||||+.
T Consensus 3 I~i~G~~GsGKsT~ 16 (205)
T 2jaq_A 3 IAIFGTVGAGKSTI 16 (205)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECCCccCHHHH
Confidence 34569999999954
No 359
>2v9p_A Replication protein E1; AAA+ molecular motor, DNA replication, DNA translocation, nucleotide-binding, DNA-binding; 3.00A {Bovine papillomavirus type 1} PDB: 2gxa_A*
Probab=29.94 E-value=7.5 Score=34.24 Aligned_cols=16 Identities=25% Similarity=0.312 Sum_probs=12.0
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
++.-.|++|||||+.+
T Consensus 128 ~vaIvGpsGsGKSTLl 143 (305)
T 2v9p_A 128 CLAFIGPPNTGKSMLC 143 (305)
T ss_dssp EEEEECSSSSSHHHHH
T ss_pred EEEEECCCCCcHHHHH
Confidence 3456799999999543
No 360
>3ney_A 55 kDa erythrocyte membrane protein; structural genomics consortium, SGC, 55 kDa erythrocyte MEMB protein; 2.26A {Homo sapiens} SCOP: c.37.1.0
Probab=29.92 E-value=6.1 Score=32.48 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=10.9
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|++|+|||..
T Consensus 22 ivl~GPSGaGKsTL 35 (197)
T 3ney_A 22 LVLIGASGVGRSHI 35 (197)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECcCCCCHHHH
Confidence 34469999999953
No 361
>1zak_A Adenylate kinase; ATP:AMP-phosphotransferase, transferase; HET: AP5; 3.50A {Zea mays} SCOP: c.37.1.1 g.41.2.1
Probab=29.90 E-value=7.7 Score=31.64 Aligned_cols=15 Identities=20% Similarity=0.361 Sum_probs=12.0
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 7 ~I~l~G~~GsGKsT~ 21 (222)
T 1zak_A 7 KVMISGAPASGKGTQ 21 (222)
T ss_dssp CEEEEESTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 356679999999964
No 362
>2it1_A 362AA long hypothetical maltose/maltodextrin transport ATP-binding protein; structural genomics, NPPSFA; 1.94A {Pyrococcus horikoshii}
Probab=29.90 E-value=7.7 Score=35.03 Aligned_cols=14 Identities=29% Similarity=0.517 Sum_probs=11.5
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.+-
T Consensus 34 llGpnGsGKSTLLr 47 (362)
T 2it1_A 34 LLGPSGSGKSTLLY 47 (362)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EECCCCchHHHHHH
Confidence 45999999998753
No 363
>1ak2_A Adenylate kinase isoenzyme-2; nucleoside monophosphate kinase, phosphotransferase; 1.92A {Bos taurus} SCOP: c.37.1.1 g.41.2.1 PDB: 2ak2_A 2c9y_A*
Probab=29.89 E-value=7.8 Score=32.00 Aligned_cols=16 Identities=25% Similarity=0.412 Sum_probs=12.9
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+-.|..|||||+..
T Consensus 18 ~I~l~G~~GsGKsT~a 33 (233)
T 1ak2_A 18 RAVLLGPPGAGKGTQA 33 (233)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4677899999999653
No 364
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=29.84 E-value=14 Score=38.58 Aligned_cols=28 Identities=25% Similarity=0.338 Sum_probs=18.8
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
..++..+-.|..--++..|+||||||..
T Consensus 613 ~~il~~~~~g~p~d~ll~~~TGsGKT~v 640 (1151)
T 2eyq_A 613 NAVLSDMCQPLAMDRLVCGDVGFGKTEV 640 (1151)
T ss_dssp HHHHHHHHSSSCCEEEEECCCCTTTHHH
T ss_pred HHHHHHHhcCCcCcEEEECCCCCCHHHH
Confidence 3344444446644567889999999965
No 365
>3qf7_A RAD50; ABC-ATPase, ATPase, hydrolase; HET: ANP; 1.90A {Thermotoga maritima} PDB: 3qg5_A 3tho_A*
Probab=29.81 E-value=11 Score=33.77 Aligned_cols=13 Identities=31% Similarity=0.503 Sum_probs=10.4
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
-+|++|||||..+
T Consensus 28 i~G~NGaGKTTll 40 (365)
T 3qf7_A 28 VEGPNGAGKSSLF 40 (365)
T ss_dssp EECCTTSSHHHHH
T ss_pred EECCCCCCHHHHH
Confidence 4799999999443
No 366
>3tqf_A HPR(Ser) kinase; transferase, hydrolase; 2.80A {Coxiella burnetii}
Probab=29.71 E-value=5.3 Score=32.56 Aligned_cols=26 Identities=23% Similarity=0.153 Sum_probs=17.8
Q ss_pred hcchhhhhhhhcccCCCceEeehHHH
Q psy7226 56 FNGINATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 56 l~G~n~~i~aYG~tgSGKTyTm~Gii 81 (279)
++-+...|+-.|++|+|||.++..++
T Consensus 12 v~v~G~gvli~G~SGaGKStlal~L~ 37 (181)
T 3tqf_A 12 LVIDKMGVLITGEANIGKSELSLALI 37 (181)
T ss_dssp EEETTEEEEEEESSSSSHHHHHHHHH
T ss_pred EEECCEEEEEEcCCCCCHHHHHHHHH
Confidence 34344456777999999997755443
No 367
>2d7d_A Uvrabc system protein B; helicase, protein-DNA-ADP ternary complex, hydrolase/DNA complex; HET: ADP; 2.10A {Bacillus subtilis} PDB: 2nmv_A* 2fdc_A* 1t5l_A 3uwx_B 1d9z_A* 1d9x_A 2d7d_B* 2nmv_B*
Probab=29.53 E-value=13 Score=36.30 Aligned_cols=51 Identities=27% Similarity=0.442 Sum_probs=33.6
Q ss_pred eEeeecccCCCCCCcceehhhhHHhHHhhhcchhhhhhhhcccCCCceEeehHHHH
Q psy7226 27 VFIFDNIFGPNDSNETIFTEVLVPLINHMFNGINATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 27 ~f~FD~Vf~~~a~Q~~vf~~~~~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
.|....=|.|...|..-++. +++.+-.|... ....|.||||||++|..++.
T Consensus 4 ~~~~~~~~~p~~~Q~~~i~~----l~~~~~~~~~~-~~l~g~~gs~k~~~~a~~~~ 54 (661)
T 2d7d_A 4 RFELVSKYQPQGDQPKAIEK----LVKGIQEGKKH-QTLLGATGTGKTFTVSNLIK 54 (661)
T ss_dssp CCCCCCSCCCCTTHHHHHHH----HHHHHHTTCSE-EEEEECTTSCHHHHHHHHHH
T ss_pred cceeecCCCCCCCCHHHHHH----HHHHHhcCCCc-EEEECcCCcHHHHHHHHHHH
Confidence 36666777888888666544 44444445322 34469999999999985543
No 368
>2qi9_C Vitamin B12 import ATP-binding protein BTUD; inner membrane, membrane, transmembrane, transport, ATP- binding, hydrolase, nucleotide-binding, periplasm; HET: 1PE; 2.60A {Escherichia coli} PDB: 1l7v_C* 4dbl_C
Probab=29.38 E-value=7.8 Score=32.89 Aligned_cols=15 Identities=27% Similarity=0.463 Sum_probs=11.5
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|++|||||+.+-
T Consensus 30 ~liG~NGsGKSTLlk 44 (249)
T 2qi9_C 30 HLVGPNGAGKSTLLA 44 (249)
T ss_dssp EEECCTTSSHHHHHH
T ss_pred EEECCCCCcHHHHHH
Confidence 445999999996543
No 369
>2ihy_A ABC transporter, ATP-binding protein; ATPase, ABC cassette, hydrolase; HET: MSE; 1.90A {Staphylococcus aureus}
Probab=29.36 E-value=7.9 Score=33.47 Aligned_cols=15 Identities=40% Similarity=0.751 Sum_probs=11.4
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|++|||||+.+-
T Consensus 51 ~liG~NGsGKSTLlk 65 (279)
T 2ihy_A 51 ILYGLNGAGKTTLLN 65 (279)
T ss_dssp EEECCTTSSHHHHHH
T ss_pred EEECCCCCcHHHHHH
Confidence 345999999997643
No 370
>3crv_A XPD/RAD3 related DNA helicase; XPD helicase DNA repair cancer aging, hydrolase; HET: FLC; 2.00A {Sulfolobus acidocaldarius} PDB: 3crw_1*
Probab=29.36 E-value=14 Score=34.96 Aligned_cols=30 Identities=23% Similarity=0.359 Sum_probs=18.1
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehHHHHHH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
+.+.+..|.++. .-.+||+|||.+ .++|-.
T Consensus 15 v~~~l~~~~~~~--~~a~TGtGKT~~--~l~p~l 44 (551)
T 3crv_A 15 VIEGLRNNFLVA--LNAPTGSGKTLF--SLLVSL 44 (551)
T ss_dssp HHHHHHTTCEEE--EECCTTSSHHHH--HHHHHH
T ss_pred HHHHHHcCCcEE--EECCCCccHHHH--HHHHHH
Confidence 344555777654 445899999654 444433
No 371
>1g29_1 MALK, maltose transport protein MALK; ATPase, active transport, maltose uptake and regulation, sugar binding protein; 1.90A {Thermococcus litoralis} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 2d62_A
Probab=29.34 E-value=8 Score=35.03 Aligned_cols=15 Identities=40% Similarity=0.636 Sum_probs=11.8
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|++|||||+.|-
T Consensus 33 ~llGpnGsGKSTLLr 47 (372)
T 1g29_1 33 ILLGPSGCGKTTTLR 47 (372)
T ss_dssp EEECSTTSSHHHHHH
T ss_pred EEECCCCcHHHHHHH
Confidence 345999999998754
No 372
>1qhl_A Protein (cell division protein MUKB); SMC, chromosome partitioning; 2.20A {Escherichia coli} SCOP: c.37.1.12
Probab=29.28 E-value=5.7 Score=33.39 Aligned_cols=14 Identities=36% Similarity=0.532 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||..+
T Consensus 31 ~i~GpnGsGKSTll 44 (227)
T 1qhl_A 31 TLSGGNGAGKSTTM 44 (227)
T ss_dssp HHHSCCSHHHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 45599999999653
No 373
>2zu0_C Probable ATP-dependent transporter SUFC; iron-sulfur cluster, ABC-ATPase, ATP-binding, cytoplasm, nucleotide-binding; HET: MES; 2.20A {Escherichia coli} PDB: 2d3w_A
Probab=29.12 E-value=8 Score=33.12 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=11.1
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 50 ~l~G~NGsGKSTLl 63 (267)
T 2zu0_C 50 AIMGPNGSGKSTLS 63 (267)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34599999999654
No 374
>3exa_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.30A {Bacillus halodurans} PDB: 2qgn_A
Probab=29.10 E-value=10 Score=33.78 Aligned_cols=15 Identities=40% Similarity=0.368 Sum_probs=11.7
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|+-.|+||||||...
T Consensus 6 i~i~GptgsGKt~la 20 (322)
T 3exa_A 6 VAIVGPTAVGKTKTS 20 (322)
T ss_dssp EEEECCTTSCHHHHH
T ss_pred EEEECCCcCCHHHHH
Confidence 455699999999653
No 375
>2pjz_A Hypothetical protein ST1066; ATP binding protein, structural genomics, NPPSFA; 1.90A {Sulfolobus tokodaii}
Probab=29.06 E-value=8 Score=33.14 Aligned_cols=16 Identities=31% Similarity=0.592 Sum_probs=11.9
Q ss_pred hhhhcccCCCceEeeh
Q psy7226 63 LLAYGQTGGGKTYTVS 78 (279)
Q Consensus 63 i~aYG~tgSGKTyTm~ 78 (279)
+.-.|++|||||+.+-
T Consensus 33 ~~i~G~NGsGKSTLlk 48 (263)
T 2pjz_A 33 VIILGPNGSGKTTLLR 48 (263)
T ss_dssp EEEECCTTSSHHHHHH
T ss_pred EEEECCCCCCHHHHHH
Confidence 3445999999997643
No 376
>2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus}
Probab=28.91 E-value=12 Score=38.90 Aligned_cols=22 Identities=27% Similarity=0.572 Sum_probs=19.6
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 153 ~~~~QsIiisGESGAGKTe~~K 174 (1080)
T 2dfs_A 153 DERNQSIIVSGESGAGKTVSAK 174 (1080)
T ss_dssp HTCCEEEEEECSTTSSHHHHHH
T ss_pred cCCCcEEEEcCCCCCCccchHH
Confidence 5899999999999999998743
No 377
>1jjv_A Dephospho-COA kinase; P-loop nucleotide-binding fold, structure 2 function project, S2F, structural genomics, transferase; HET: ATP; 2.00A {Haemophilus influenzae} SCOP: c.37.1.1
Probab=28.86 E-value=10 Score=30.42 Aligned_cols=15 Identities=33% Similarity=0.361 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|.-.|+.|||||+..
T Consensus 5 i~l~G~~GsGKST~~ 19 (206)
T 1jjv_A 5 VGLTGGIGSGKTTIA 19 (206)
T ss_dssp EEEECSTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 344699999999653
No 378
>1xp8_A RECA protein, recombinase A; recombination, radioresistance, DNA-repair, ATPase, DNA-BIND protein, DNA binding protein; HET: AGS; 2.50A {Deinococcus radiodurans} SCOP: c.37.1.11 d.48.1.1
Probab=28.84 E-value=14 Score=33.22 Aligned_cols=37 Identities=24% Similarity=0.328 Sum_probs=25.5
Q ss_pred hHHhHHhhhc--chh--hhhhhhcccCCCceEeehHHHHHH
Q psy7226 48 LVPLINHMFN--GIN--ATLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 48 ~~plv~~~l~--G~n--~~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
.-+-+|.++. |.. ..++-||+.|+|||..+.-++..+
T Consensus 58 G~~~LD~~Lg~GGl~~G~li~I~G~pGsGKTtlal~la~~~ 98 (366)
T 1xp8_A 58 GSLSLDLALGVGGIPRGRITEIYGPESGGKTTLALAIVAQA 98 (366)
T ss_dssp SCHHHHHHTSSSSEETTSEEEEEESTTSSHHHHHHHHHHHH
T ss_pred CCHHHHHHhCCCCccCCcEEEEEcCCCCChHHHHHHHHHHH
Confidence 5677788886 443 245668999999997766554433
No 379
>1v43_A Sugar-binding transport ATP-binding protein; ATPase, active transport, sugar uptake and regulation, transport protein; 2.20A {Pyrococcus horikoshii} SCOP: b.40.6.3 b.40.6.3 c.37.1.12 PDB: 1vci_A*
Probab=28.78 E-value=8.3 Score=34.96 Aligned_cols=14 Identities=43% Similarity=0.615 Sum_probs=11.5
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.|-
T Consensus 42 llGpnGsGKSTLLr 55 (372)
T 1v43_A 42 LLGPSGCGKTTTLR 55 (372)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EECCCCChHHHHHH
Confidence 45999999998753
No 380
>2f1r_A Molybdopterin-guanine dinucleotide biosynthesis protein B (MOBB); structural genomics, PSI, protein structure initiative; 2.10A {Archaeoglobus fulgidus}
Probab=28.65 E-value=6.3 Score=31.44 Aligned_cols=14 Identities=29% Similarity=0.487 Sum_probs=10.6
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
--|++|||||+.+.
T Consensus 7 IvG~SGsGKSTL~~ 20 (171)
T 2f1r_A 7 IVGTSDSGKTTLIT 20 (171)
T ss_dssp EEESCHHHHHHHHH
T ss_pred EECCCCCCHHHHHH
Confidence 35899999996543
No 381
>1tq4_A IIGP1, interferon-inducible GTPase; interferon gamma, dimer, immunology, signaling protein; HET: GDP; 1.95A {Mus musculus} SCOP: c.37.1.8 PDB: 1tqd_A* 1tq6_A* 1tpz_A* 1tq2_A*
Probab=28.56 E-value=6.5 Score=36.21 Aligned_cols=14 Identities=36% Similarity=0.598 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
--.|++|+|||+.|
T Consensus 73 alvG~nGaGKSTLl 86 (413)
T 1tq4_A 73 AVTGETGSGKSSFI 86 (413)
T ss_dssp EEEECTTSSHHHHH
T ss_pred EEECCCCCcHHHHH
Confidence 34599999999654
No 382
>1zuh_A Shikimate kinase; alpha-beta protein, transferase; 1.80A {Helicobacter pylori} PDB: 1zui_A* 3hr7_A 3muf_A* 3mrs_A 3n2e_A*
Probab=28.52 E-value=8.4 Score=29.78 Aligned_cols=14 Identities=36% Similarity=0.534 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 10 i~l~G~~GsGKSTv 23 (168)
T 1zuh_A 10 LVLIGFMGSGKSSL 23 (168)
T ss_dssp EEEESCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45679999999964
No 383
>2ixe_A Antigen peptide transporter 1; ABC ATPase, hydrolase; HET: ATP; 2.0A {Rattus norvegicus} PDB: 2ixg_A* 2ixf_A* 1jj7_A*
Probab=28.43 E-value=8.3 Score=33.10 Aligned_cols=14 Identities=29% Similarity=0.475 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 49 ~i~G~nGsGKSTLl 62 (271)
T 2ixe_A 49 ALVGPNGSGKSTVA 62 (271)
T ss_dssp EEECSTTSSHHHHH
T ss_pred EEECCCCCCHHHHH
Confidence 34699999999654
No 384
>2qag_A Septin-2, protein NEDD5; cell cycle, cell division, GTP-binding, nucleotide-binding, phosphorylation, acetylation, alternative splicing, coiled coil; HET: GDP GTP; 4.00A {Homo sapiens}
Probab=28.39 E-value=7.1 Score=35.01 Aligned_cols=24 Identities=29% Similarity=0.509 Sum_probs=19.6
Q ss_pred hhhcchhhhhhhhcccCCCceEee
Q psy7226 54 HMFNGINATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 54 ~~l~G~n~~i~aYG~tgSGKTyTm 77 (279)
.+..|++..|+..|.+|+|||..+
T Consensus 31 ~~~~~~~~~I~vvG~~g~GKSTLl 54 (361)
T 2qag_A 31 SVKKGFEFTLMVVGESGLGKSTLI 54 (361)
T ss_dssp HHHHCCEECEEECCCTTSCHHHHH
T ss_pred eecCCCCEEEEEEcCCCCCHHHHH
Confidence 356788888899999999999654
No 385
>1e4v_A Adenylate kinase; transferase(phosphotransferase); HET: AP5; 1.85A {Escherichia coli} SCOP: c.37.1.1 g.41.2.1 PDB: 1e4y_A* 1ake_A* 1ank_A* 2eck_A* 3hpq_A* 4ake_A 3hpr_A*
Probab=28.31 E-value=8.5 Score=31.21 Aligned_cols=14 Identities=21% Similarity=0.356 Sum_probs=11.1
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 3 I~l~G~~GsGKsT~ 16 (214)
T 1e4v_A 3 IILLGAPVAGKGTQ 16 (214)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45569999999954
No 386
>2z0h_A DTMP kinase, thymidylate kinase; ATP-binding, nucleotide biosynthesis, nucleotide-binding, transferase, structural genomics, NPPSFA; HET: ADP TYD; 2.10A {Thermotoga maritima} PDB: 3hjn_A*
Probab=28.25 E-value=8.6 Score=30.33 Aligned_cols=15 Identities=27% Similarity=0.461 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|.-.|..|||||+..
T Consensus 3 I~l~G~~GsGKsT~~ 17 (197)
T 2z0h_A 3 ITFEGIDGSGKSTQI 17 (197)
T ss_dssp EEEECSTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 345699999999653
No 387
>3gd7_A Fusion complex of cystic fibrosis transmembrane conductance regulator, residues 1193-1427...; CFTR, ABC transporter, nucleotide binding domain, NBD; HET: B44; 2.70A {Homo sapiens}
Probab=28.19 E-value=8.5 Score=35.11 Aligned_cols=14 Identities=43% Similarity=0.679 Sum_probs=11.4
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||++|-
T Consensus 52 llGpsGsGKSTLLr 65 (390)
T 3gd7_A 52 LLGRTGSGKSTLLS 65 (390)
T ss_dssp EEESTTSSHHHHHH
T ss_pred EECCCCChHHHHHH
Confidence 45999999998754
No 388
>1cr0_A DNA primase/helicase; RECA-type protein fold, transferase; HET: DNA; 2.30A {Enterobacteria phage T7} SCOP: c.37.1.11 PDB: 1cr1_A* 1cr2_A* 1cr4_A* 1e0j_A* 1e0k_A*
Probab=27.57 E-value=13 Score=31.78 Aligned_cols=28 Identities=25% Similarity=0.258 Sum_probs=17.6
Q ss_pred hHHhhhcchh--hhhhhhcccCCCceEeeh
Q psy7226 51 LINHMFNGIN--ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 51 lv~~~l~G~n--~~i~aYG~tgSGKTyTm~ 78 (279)
.++.+.-|.. ..+.-.|++|+|||..+.
T Consensus 24 ~Ld~i~~~l~~G~~~~i~G~~G~GKTTl~~ 53 (296)
T 1cr0_A 24 GINDKTLGARGGEVIMVTSGSGMGKSTFVR 53 (296)
T ss_dssp THHHHHCSBCTTCEEEEEESTTSSHHHHHH
T ss_pred HHHHHhcCCCCCeEEEEEeCCCCCHHHHHH
Confidence 3444443332 235567999999997754
No 389
>4anj_A Unconventional myosin-VI, green fluorescent prote; motor protein-metal-bindng protein complex, molecular motor, metal-binding protein, transition state; HET: CR2 ADP; 2.60A {Sus scrofa}
Probab=27.52 E-value=13 Score=38.48 Aligned_cols=22 Identities=23% Similarity=0.483 Sum_probs=19.8
Q ss_pred cchhhhhhhhcccCCCceEeeh
Q psy7226 57 NGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
++.|-||+.-|.+|||||.+.-
T Consensus 141 ~~~nQsIiiSGESGAGKTestK 162 (1052)
T 4anj_A 141 LKLSQSIIVSGESGAGKTENTK 162 (1052)
T ss_dssp HTCCEEEEEECSTTSSHHHHHH
T ss_pred hCCCceEEEecCCCCCHHHHHH
Confidence 6899999999999999998854
No 390
>1nlf_A Regulatory protein REPA; replicative DNA helicase structural changes, replication; 1.95A {Escherichia coli} SCOP: c.37.1.11 PDB: 1g8y_A 1olo_A
Probab=27.46 E-value=6.9 Score=33.34 Aligned_cols=18 Identities=17% Similarity=0.111 Sum_probs=14.0
Q ss_pred hhhhhcccCCCceEeehH
Q psy7226 62 TLLAYGQTGGGKTYTVSA 79 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~G 79 (279)
.+.-+|++|||||..+.-
T Consensus 32 i~~i~G~~GsGKTtl~~~ 49 (279)
T 1nlf_A 32 VGALVSPGGAGKSMLALQ 49 (279)
T ss_dssp EEEEEESTTSSHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHH
Confidence 456789999999976553
No 391
>1ypw_A Transitional endoplasmic reticulum ATPase; AAA, P97/VCP, ERAD, CDC48; HET: ADP ANP; 3.50A {Mus musculus} PDB: 1oz4_A* 1yq0_A* 1yqi_A* 1r7r_A* 3cf2_A* 3cf1_A* 3cf3_A*
Probab=27.44 E-value=8.7 Score=38.46 Aligned_cols=17 Identities=41% Similarity=0.628 Sum_probs=14.2
Q ss_pred hhhhhhcccCCCceEee
Q psy7226 61 ATLLAYGQTGGGKTYTV 77 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyTm 77 (279)
..++-||++|+|||+.+
T Consensus 512 ~~vLL~GppGtGKT~La 528 (806)
T 1ypw_A 512 KGVLFYGPPGCGKTLLA 528 (806)
T ss_dssp CCCCCBCCTTSSHHHHH
T ss_pred ceeEEECCCCCCHHHHH
Confidence 45788999999999764
No 392
>1zu4_A FTSY; GTPase, signal recognition particle, SRP, receptor, protein transport; 1.95A {Mycoplasma mycoides} PDB: 1zu5_A
Probab=27.36 E-value=7.1 Score=34.53 Aligned_cols=19 Identities=32% Similarity=0.557 Sum_probs=14.0
Q ss_pred hhhhhcccCCCceEeehHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gi 80 (279)
.|.-.|++|+|||+|+.-|
T Consensus 107 vI~ivG~~G~GKTT~~~~L 125 (320)
T 1zu4_A 107 IFMLVGVNGTGKTTSLAKM 125 (320)
T ss_dssp EEEEESSTTSSHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHH
Confidence 3455699999999886533
No 393
>3hr8_A Protein RECA; alpha and beta proteins (A/B, A+B), ATP-binding, cytoplasm, damage, DNA recombination, DNA repair, DNA-binding; 1.95A {Thermotoga maritima}
Probab=27.35 E-value=16 Score=32.87 Aligned_cols=35 Identities=23% Similarity=0.186 Sum_probs=25.3
Q ss_pred hhHHhHHhhhc--chh--hhhhhhcccCCCceEeehHHH
Q psy7226 47 VLVPLINHMFN--GIN--ATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 47 ~~~plv~~~l~--G~n--~~i~aYG~tgSGKTyTm~Gii 81 (279)
+..+-+|.++. |.. ..+.-||++|+|||+.+.-++
T Consensus 44 TG~~~LD~~Lg~GGi~~G~i~~I~GppGsGKSTLal~la 82 (356)
T 3hr8_A 44 TGSLAIDIATGVGGYPRGRIVEIFGQESSGKTTLALHAI 82 (356)
T ss_dssp CSCHHHHHHTSSSSEETTEEEEEEESTTSSHHHHHHHHH
T ss_pred CCCHHHHHHhccCCccCCcEEEEECCCCCCHHHHHHHHH
Confidence 35678888887 443 356788999999997665443
No 394
>3ice_A Transcription termination factor RHO; transcription, ATPase, hexamer, helicase, RNA, RECA, OB fold ATP-binding, hydrolase; HET: MSE ADP SPD; 2.80A {Escherichia coli k-12} PDB: 1pv4_A 1pvo_A* 1xpo_A* 1xpr_A* 1xpu_A* 2ht1_A
Probab=27.09 E-value=24 Score=32.52 Aligned_cols=38 Identities=16% Similarity=0.154 Sum_probs=21.5
Q ss_pred hhHHhHHhhhc-chhhhhhhhcccCCCceEeehHHHHHHH
Q psy7226 47 VLVPLINHMFN-GINATLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 47 ~~~plv~~~l~-G~n~~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
+.-..|+-++- |..-.+.-+|++|+|||.. ...|.+.+
T Consensus 160 tGiraID~~~pi~rGQr~~IvG~sG~GKTtL-l~~Iar~i 198 (422)
T 3ice_A 160 LTARVLDLASPIGRGQRGLIVAPPKAGKTML-LQNIAQSI 198 (422)
T ss_dssp HHHHHHHHHSCCBTTCEEEEECCSSSSHHHH-HHHHHHHH
T ss_pred ccceeeeeeeeecCCcEEEEecCCCCChhHH-HHHHHHHH
Confidence 34555555542 3333445568999999954 33444444
No 395
>2wv9_A Flavivirin protease NS2B regulatory subunit, FLAV protease NS3 catalytic subunit; nucleotide-binding, capsid protein; 2.75A {Murray valley encephalitis virus}
Probab=27.08 E-value=15 Score=36.04 Aligned_cols=18 Identities=22% Similarity=0.143 Sum_probs=14.2
Q ss_pred cchhhhhhhhcccCCCceEe
Q psy7226 57 NGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyT 76 (279)
.|.++ +..|+||||||..
T Consensus 240 ~g~dv--lv~apTGSGKTl~ 257 (673)
T 2wv9_A 240 KRQLT--VLDLHPGAGKTRR 257 (673)
T ss_dssp TTCEE--EECCCTTTTTTTT
T ss_pred cCCeE--EEEeCCCCCHHHH
Confidence 56654 6678999999987
No 396
>3be4_A Adenylate kinase; malaria, cryptosporidium parvum nonprotein inhibitors, nucleotide-binding, transferase; HET: AP5; 1.60A {Cryptosporidium parvum iowa II}
Probab=27.07 E-value=9.3 Score=31.15 Aligned_cols=15 Identities=33% Similarity=0.572 Sum_probs=12.0
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 7 ~I~l~G~~GsGKsT~ 21 (217)
T 3be4_A 7 NLILIGAPGSGKGTQ 21 (217)
T ss_dssp EEEEEECTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 356679999999964
No 397
>1a5t_A Delta prime, HOLB; zinc finger, DNA replication; 2.20A {Escherichia coli K12} SCOP: a.80.1.1 c.37.1.20 PDB: 1jr3_E* 1xxh_E* 1xxi_E* 3glf_E* 3glg_E* 3glh_E* 3gli_E*
Probab=27.04 E-value=17 Score=31.86 Aligned_cols=28 Identities=21% Similarity=0.253 Sum_probs=18.1
Q ss_pred hHHhhhcch-hhhhhhhcccCCCceEeeh
Q psy7226 51 LINHMFNGI-NATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 51 lv~~~l~G~-n~~i~aYG~tgSGKTyTm~ 78 (279)
+...+-.|. .-.++-||+.|+|||.+..
T Consensus 14 l~~~i~~~~~~~a~L~~G~~G~GKt~~a~ 42 (334)
T 1a5t_A 14 LVASYQAGRGHHALLIQALPGMGDDALIY 42 (334)
T ss_dssp HHHHHHTTCCCSEEEEECCTTSCHHHHHH
T ss_pred HHHHHHcCCcceeEEEECCCCchHHHHHH
Confidence 333333444 2347889999999996543
No 398
>3tlx_A Adenylate kinase 2; structural genomics, structural genomics consortium, SGC, RO fold, transferase, ATP binding, phosphorylation; HET: ADP ATP AMP; 2.75A {Plasmodium falciparum}
Probab=26.97 E-value=9.5 Score=31.90 Aligned_cols=15 Identities=27% Similarity=0.459 Sum_probs=12.5
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|+.|||||+.
T Consensus 31 ~I~l~G~~GsGKsT~ 45 (243)
T 3tlx_A 31 RYIFLGAPGSGKGTQ 45 (243)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 477789999999954
No 399
>1ltq_A Polynucleotide kinase; phosphatase, alpha/beta, P-loop, transferase; HET: ADP; 2.33A {Enterobacteria phage T4} SCOP: c.108.1.9 c.37.1.1 PDB: 1rc8_A* 1rpz_A* 1rrc_A* 2ia5_A
Probab=26.93 E-value=9.6 Score=32.58 Aligned_cols=15 Identities=33% Similarity=0.519 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+..|.+|||||+.
T Consensus 4 ~I~l~G~~GsGKST~ 18 (301)
T 1ltq_A 4 IILTIGCPGSGKSTW 18 (301)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 356779999999964
No 400
>1svm_A Large T antigen; AAA+ fold, viral protein; HET: ATP; 1.94A {Simian virus 40} SCOP: c.37.1.20 PDB: 1svl_A* 1svo_A 1n25_A 2h1l_A
Probab=26.76 E-value=11 Score=34.23 Aligned_cols=17 Identities=29% Similarity=0.268 Sum_probs=13.4
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
.+.-+|++|||||+.+.
T Consensus 171 ~i~l~G~~GsGKSTl~~ 187 (377)
T 1svm_A 171 YWLFKGPIDSGKTTLAA 187 (377)
T ss_dssp EEEEECSTTSSHHHHHH
T ss_pred EEEEECCCCCCHHHHHH
Confidence 56678999999996543
No 401
>2qt1_A Nicotinamide riboside kinase 1; non-protein kinase, NAD+, NRK1, nicotinic acid riboside kinase activity, NAD biosynthesis; HET: NNR; 1.32A {Homo sapiens} PDB: 2qsy_A* 2qsz_A* 2qt0_A* 2p0e_A* 2qg6_A* 2ql6_A*
Probab=26.56 E-value=12 Score=30.10 Aligned_cols=25 Identities=24% Similarity=0.135 Sum_probs=14.8
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
.+|..+-.|.. |.-.|++|||||+.
T Consensus 13 ~~~~~~~~~~~--i~i~G~~GsGKSTl 37 (207)
T 2qt1_A 13 GLVPRGSKTFI--IGISGVTNSGKTTL 37 (207)
T ss_dssp -CCCCSCCCEE--EEEEESTTSSHHHH
T ss_pred cccccCCCCeE--EEEECCCCCCHHHH
Confidence 34444444432 44569999999953
No 402
>2vl7_A XPD; helicase, unknown function; 2.25A {Sulfolobus tokodaii}
Probab=26.55 E-value=17 Score=34.38 Aligned_cols=28 Identities=29% Similarity=0.347 Sum_probs=17.7
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehHHHH
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~ 82 (279)
+...+..|.++ +.-.+||+|||.+ .++|
T Consensus 19 v~~~~~~~~~~--~~~a~TGtGKT~~--~l~~ 46 (540)
T 2vl7_A 19 AINALKHGKTL--LLNAKPGLGKTVF--VEVL 46 (540)
T ss_dssp HHHHHHTTCEE--EEECCTTSCHHHH--HHHH
T ss_pred HHHHHHcCCCE--EEEcCCCCcHHHH--HHHH
Confidence 34445577765 4445899999953 4555
No 403
>3t5d_A Septin-7; GTP-binding protein, cytoskeleton, signaling protein; HET: GDP; 3.30A {Homo sapiens} PDB: 3tw4_A*
Probab=26.52 E-value=10 Score=32.26 Aligned_cols=20 Identities=35% Similarity=0.592 Sum_probs=15.6
Q ss_pred cchhhhhhhhcccCCCceEe
Q psy7226 57 NGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 57 ~G~n~~i~aYG~tgSGKTyT 76 (279)
.|+...|+..|.+|+|||..
T Consensus 5 ~g~~~~I~vvG~~g~GKSTL 24 (274)
T 3t5d_A 5 SGFEFTLMVVGESGLGKSTL 24 (274)
T ss_dssp --CEEEEEEEECTTSSHHHH
T ss_pred CccEEEEEEECCCCCCHHHH
Confidence 57777889999999999953
No 404
>2wwf_A Thymidilate kinase, putative; transferase, malaria; HET: TMP ADP; 1.89A {Plasmodium falciparum} PDB: 2wwg_A* 2wwh_A* 2wwi_A*
Probab=26.22 E-value=9.8 Score=30.44 Aligned_cols=15 Identities=20% Similarity=0.251 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-.|..|||||+.
T Consensus 12 ~I~l~G~~GsGKST~ 26 (212)
T 2wwf_A 12 FIVFEGLDRSGKSTQ 26 (212)
T ss_dssp EEEEEESTTSSHHHH
T ss_pred EEEEEcCCCCCHHHH
Confidence 466779999999954
No 405
>1w36_B RECB, exodeoxyribonuclease V beta chain; recombination, helicase, hydrolase, DNA repair; HET: DNA; 3.1A {Escherichia coli} SCOP: c.37.1.19 c.37.1.19 c.52.1.24 PDB: 3k70_B*
Probab=26.17 E-value=14 Score=38.46 Aligned_cols=18 Identities=39% Similarity=0.798 Sum_probs=12.9
Q ss_pred ccCCCceEeehHHHHHHH
Q psy7226 68 QTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 68 ~tgSGKTyTm~Gii~r~l 85 (279)
..||||||||...+.+.+
T Consensus 24 sAGSGKT~~L~~r~lrLl 41 (1180)
T 1w36_B 24 SAGTGKTFTIAALYLRLL 41 (1180)
T ss_dssp CTTSCHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHH
Confidence 469999999765554444
No 406
>2b6h_A ADP-ribosylation factor 5; membrane trafficking, GDP, structural genomics, structural G consortium, SGC, protein transport; HET: GDP; 1.76A {Homo sapiens} SCOP: c.37.1.8 PDB: 1z6x_A* 3aq4_A*
Probab=26.08 E-value=11 Score=29.68 Aligned_cols=27 Identities=26% Similarity=0.423 Sum_probs=18.8
Q ss_pred HhHHhhhcchhhhhhhhcccCCCceEe
Q psy7226 50 PLINHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 50 plv~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
+++..++.....-|+..|.+|+|||..
T Consensus 19 ~~~~~~~~~~~~ki~v~G~~~vGKSsL 45 (192)
T 2b6h_A 19 SLFSRIFGKKQMRILMVGLDAAGKTTI 45 (192)
T ss_dssp CGGGGTTTTSCEEEEEEESTTSSHHHH
T ss_pred HHHHHhccCCccEEEEECCCCCCHHHH
Confidence 344445555556678889999999943
No 407
>1e69_A Chromosome segregation SMC protein; structural maintenance of chromosomes, coiled coil; 3.1A {Thermotoga maritima} SCOP: c.37.1.12
Probab=26.04 E-value=15 Score=32.02 Aligned_cols=16 Identities=31% Similarity=0.545 Sum_probs=12.0
Q ss_pred hhhcccCCCceEeehH
Q psy7226 64 LAYGQTGGGKTYTVSA 79 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~G 79 (279)
.-+|++|||||..|..
T Consensus 28 ~i~G~NGsGKS~ll~a 43 (322)
T 1e69_A 28 AIVGPNGSGKSNIIDA 43 (322)
T ss_dssp EEECCTTTCSTHHHHH
T ss_pred EEECCCCCcHHHHHHH
Confidence 3569999999955443
No 408
>3f9v_A Minichromosome maintenance protein MCM; replicative helicase, DNA replication, MCM complex, AAA+ Pro ATP-binding, DNA-binding, helicase; 4.35A {Sulfolobus solfataricus}
Probab=25.87 E-value=14 Score=35.49 Aligned_cols=15 Identities=27% Similarity=0.468 Sum_probs=12.9
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+-+|++|+|||..
T Consensus 329 ~vLL~GppGtGKT~L 343 (595)
T 3f9v_A 329 HILIIGDPGTAKSQM 343 (595)
T ss_dssp CEEEEESSCCTHHHH
T ss_pred ceEEECCCchHHHHH
Confidence 578899999999954
No 409
>4a15_A XPD helicase, ATP-dependent DNA helicase TA0057; hydrolase, nucleotide excision repair,; 2.20A {Thermoplasma acidophilum} PDB: 2vsf_A*
Probab=25.77 E-value=17 Score=35.10 Aligned_cols=22 Identities=23% Similarity=0.293 Sum_probs=15.4
Q ss_pred HhhhcchhhhhhhhcccCCCceEe
Q psy7226 53 NHMFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 53 ~~~l~G~n~~i~aYG~tgSGKTyT 76 (279)
+.+.+|.+ +++-.+||+|||..
T Consensus 17 ~~l~~~~~--~~~~apTGtGKT~a 38 (620)
T 4a15_A 17 SSLQKSYG--VALESPTGSGKTIM 38 (620)
T ss_dssp HHHHHSSE--EEEECCTTSCHHHH
T ss_pred HHHHcCCC--EEEECCCCCCHHHH
Confidence 34446766 46667999999965
No 410
>2bbs_A Cystic fibrosis transmembrane conductance regulator; ATP binding cassette, transport protein; HET: ATP; 2.05A {Homo sapiens} PDB: 2bbt_A* 1xmi_A* 1xmj_A* 2bbo_A* 3si7_A* 1r0w_A 1q3h_A 1r0x_A* 1r0y_A* 1r0z_A* 1r10_A* 1xf9_A* 1xfa_A*
Probab=25.72 E-value=9.9 Score=33.07 Aligned_cols=14 Identities=43% Similarity=0.572 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.+
T Consensus 68 ~i~G~NGsGKSTLl 81 (290)
T 2bbs_A 68 AVAGSTGAGKTSLL 81 (290)
T ss_dssp EEEESTTSSHHHHH
T ss_pred EEECCCCCcHHHHH
Confidence 34599999999764
No 411
>2xb4_A Adenylate kinase; ATP-binding, nucleotide-binding, transferase; HET: SRT; 1.80A {Desulfovibrio gigas} PDB: 3l0s_A* 3l0p_A*
Probab=25.69 E-value=10 Score=31.12 Aligned_cols=14 Identities=36% Similarity=0.757 Sum_probs=11.2
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+-.|..|||||+.
T Consensus 3 I~l~G~~GsGKsT~ 16 (223)
T 2xb4_A 3 ILIFGPNGSGKGTQ 16 (223)
T ss_dssp EEEECCTTSCHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45569999999964
No 412
>2gno_A DNA polymerase III, gamma subunit-related protein; structural genomics, joint center for structural genomics, J protein structure initiative; HET: DNA; 2.00A {Thermotoga maritima} SCOP: a.80.1.1 c.37.1.20
Probab=25.65 E-value=14 Score=32.23 Aligned_cols=32 Identities=9% Similarity=-0.023 Sum_probs=20.6
Q ss_pred HHhHHhhhcchhhhhhhhcccCCCceEeehHH
Q psy7226 49 VPLINHMFNGINATLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 49 ~plv~~~l~G~n~~i~aYG~tgSGKTyTm~Gi 80 (279)
..+...+-.|..-.++-||+.|+|||.+..-+
T Consensus 7 ~~L~~~i~~~~~~~~Lf~Gp~G~GKtt~a~~l 38 (305)
T 2gno_A 7 ETLKRIIEKSEGISILINGEDLSYPREVSLEL 38 (305)
T ss_dssp HHHHHHHHTCSSEEEEEECSSSSHHHHHHHHH
T ss_pred HHHHHHHHCCCCcEEEEECCCCCCHHHHHHHH
Confidence 33333334455446778999999999765443
No 413
>3d31_A Sulfate/molybdate ABC transporter, ATP-binding protein; ATP-binding, nucleotide-binding, membrane, transmembrane, transport protein; 3.00A {Methanosarcina acetivorans} SCOP: b.40.6.3 c.37.1.12
Probab=25.28 E-value=7 Score=35.09 Aligned_cols=15 Identities=40% Similarity=0.647 Sum_probs=11.9
Q ss_pred hhhcccCCCceEeeh
Q psy7226 64 LAYGQTGGGKTYTVS 78 (279)
Q Consensus 64 ~aYG~tgSGKTyTm~ 78 (279)
.-.|++|||||+.|-
T Consensus 30 ~llGpnGsGKSTLLr 44 (348)
T 3d31_A 30 VILGPTGAGKTLFLE 44 (348)
T ss_dssp EEECCCTHHHHHHHH
T ss_pred EEECCCCccHHHHHH
Confidence 345999999998764
No 414
>2vp4_A Deoxynucleoside kinase; ATP-binding, DNA synthesis, phosphoprotein, feedback inhibition, deoxyribonucleoside kinase, salvage pathway; HET: DCP; 2.20A {Drosophila melanogaster} SCOP: c.37.1.1 PDB: 1j90_A* 2jj8_A* 2vp2_A* 1oe0_A* 2vp5_A* 2vp6_A* 2vp9_A* 2vpp_A* 2vqs_A* 2vp0_A* 1ot3_A* 2jcs_A* 1zm7_A* 1zmx_A*
Probab=25.26 E-value=10 Score=31.30 Aligned_cols=15 Identities=40% Similarity=0.585 Sum_probs=11.4
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|.--|+.|||||+.+
T Consensus 23 i~i~G~~GsGKSTl~ 37 (230)
T 2vp4_A 23 VLIEGNIGSGKTTYL 37 (230)
T ss_dssp EEEECSTTSCHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 344599999999654
No 415
>3tui_C Methionine import ATP-binding protein METN; ABC-transporter, type I ABC type importer, methionine uptake transporter, membrane protein; HET: ADP; 2.90A {Escherichia coli} PDB: 3tuj_C 3tuz_C* 3dhw_C
Probab=24.86 E-value=11 Score=34.18 Aligned_cols=14 Identities=29% Similarity=0.605 Sum_probs=11.1
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.+-
T Consensus 59 IiGpnGaGKSTLlr 72 (366)
T 3tui_C 59 VIGASGAGKSTLIR 72 (366)
T ss_dssp EECCTTSSHHHHHH
T ss_pred EEcCCCchHHHHHH
Confidence 45999999997653
No 416
>2vhj_A Ntpase P4, P4; non- hydrolysable ATP analogue, hydrolase, virus dsRNA, molecular motor, packaging ATPase, hexameric helicase; HET: ADP; 1.80A {Pseudomonas phage PHI12} PDB: 2vhq_A* 1w44_A* 1w46_A* 1w47_A* 1w48_A* 1w49_A* 1w4a_A* 1w4b_A* 1w4c_A 2vht_A* 2vhu_A* 2vhc_A*
Probab=24.77 E-value=11 Score=33.61 Aligned_cols=21 Identities=29% Similarity=0.316 Sum_probs=15.8
Q ss_pred hhhhhcccCCCceEeehHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIM 82 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~ 82 (279)
.++-||++|+|||+.+..+..
T Consensus 125 viLI~GpPGsGKTtLAlqlA~ 145 (331)
T 2vhj_A 125 MVIVTGKGNSGKTPLVHALGE 145 (331)
T ss_dssp EEEEECSCSSSHHHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHHHH
Confidence 356799999999987665543
No 417
>2pez_A Bifunctional 3'-phosphoadenosine 5'- phosphosulfate synthetase 1 (PAPS synthetase...; NMP-kinase fold, protein in complex with nucleic acid; HET: GGZ DAT; 1.40A {Homo sapiens} PDB: 2pey_A* 2ax4_A*
Probab=24.74 E-value=11 Score=29.49 Aligned_cols=14 Identities=36% Similarity=0.525 Sum_probs=11.0
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|..|||||+.
T Consensus 8 i~l~G~~GsGKST~ 21 (179)
T 2pez_A 8 VWLTGLSGAGKTTV 21 (179)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 44569999999954
No 418
>3d3q_A TRNA delta(2)-isopentenylpyrophosphate transferase; alpha-beta protein, structural genomics, PSI-2; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=24.69 E-value=14 Score=33.15 Aligned_cols=15 Identities=33% Similarity=0.434 Sum_probs=11.7
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|.-.|+||||||..
T Consensus 9 lI~I~GptgSGKTtl 23 (340)
T 3d3q_A 9 LIVIVGPTASGKTEL 23 (340)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred eEEEECCCcCcHHHH
Confidence 355669999999953
No 419
>3o8b_A HCV NS3 protease/helicase; ntpase, RNA, translocation, protein-RNA compl protease/ntpase/helicase, hydrolase; 1.95A {Hepatitis c virus} PDB: 3o8c_A* 3o8d_A* 3o8r_A* 4b71_A* 4b73_A* 4b74_A* 4b76_A* 4b75_A* 4a92_A* 1cu1_A 4b6e_A* 4b6f_A* 2zjo_A* 1a1v_A* 1hei_A 3kqn_A* 3kql_A* 3kqu_A* 3kqh_A 3kqk_A ...
Probab=24.68 E-value=12 Score=36.60 Aligned_cols=15 Identities=33% Similarity=0.361 Sum_probs=11.9
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
++..++||||||+.+
T Consensus 235 vlv~ApTGSGKT~a~ 249 (666)
T 3o8b_A 235 AHLHAPTGSGKSTKV 249 (666)
T ss_dssp EEEECCTTSCTTTHH
T ss_pred EEEEeCCchhHHHHH
Confidence 466789999999653
No 420
>2v54_A DTMP kinase, thymidylate kinase; nucleotide biosynthesis, ATP-binding, nucleotide-binding, poxvirus, transferase; HET: TYD POP; 2.4A {Vaccinia virus copenhagen} PDB: 2w0s_A*
Probab=24.65 E-value=11 Score=29.92 Aligned_cols=14 Identities=29% Similarity=0.342 Sum_probs=11.3
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|..|||||+.
T Consensus 7 I~l~G~~GsGKsT~ 20 (204)
T 2v54_A 7 IVFEGLDKSGKTTQ 20 (204)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEEcCCCCCHHHH
Confidence 55679999999954
No 421
>1nij_A Hypothetical protein YJIA; structural genomics, P-loop protein, GTP binding, structure function project, S2F, unknown function; 2.00A {Escherichia coli} SCOP: c.37.1.10 d.237.1.1
Probab=24.54 E-value=11 Score=32.93 Aligned_cols=13 Identities=38% Similarity=0.452 Sum_probs=10.4
Q ss_pred hhcccCCCceEee
Q psy7226 65 AYGQTGGGKTYTV 77 (279)
Q Consensus 65 aYG~tgSGKTyTm 77 (279)
--|..|||||+.+
T Consensus 9 i~G~~GaGKTTll 21 (318)
T 1nij_A 9 LTGFLGAGKTTLL 21 (318)
T ss_dssp EEESSSSSCHHHH
T ss_pred EEecCCCCHHHHH
Confidence 3499999999654
No 422
>3dmq_A RNA polymerase-associated protein RAPA; SWF2/SNF2, transcription factor, RNA polymerase recycling, activator, ATP-binding, DNA-binding; 3.20A {Escherichia coli K12}
Probab=24.29 E-value=19 Score=36.74 Aligned_cols=30 Identities=17% Similarity=0.192 Sum_probs=18.6
Q ss_pred HHhhhcchhhhhhhhcccCCCceEeehHHH
Q psy7226 52 INHMFNGINATLLAYGQTGGGKTYTVSAMI 81 (279)
Q Consensus 52 v~~~l~G~n~~i~aYG~tgSGKTyTm~Gii 81 (279)
+..++.....-++..++||+|||.++.-++
T Consensus 162 v~~~l~~~~~~~LLad~tGlGKTi~Ai~~i 191 (968)
T 3dmq_A 162 AHDVGRRHAPRVLLADEVGLGKTIEAGMIL 191 (968)
T ss_dssp HHHHHHSSSCEEEECCCTTSCHHHHHHHHH
T ss_pred HHHHHHhcCCCEEEECCCCCcHHHHHHHHH
Confidence 344454333334555899999998865444
No 423
>4epz_A Transcription anti-terminator antagonist UPXZ; transcription regulation, antagonist of transcription anti- termination; HET: MSE; 1.68A {Bacteroides uniformis atcc 8492}
Probab=24.26 E-value=42 Score=26.36 Aligned_cols=53 Identities=19% Similarity=0.228 Sum_probs=30.8
Q ss_pred hHHhhhcchhhhhhhhcccCCCceEeehHHHHHHHHHHHHHcCc--------cchhhhHHHHhhhhhhh
Q psy7226 51 LINHMFNGINATLLAYGQTGGGKTYTVSAMIMKTLQHVMQRCNK--------DDVYMSYLQLYSEKCYD 111 (279)
Q Consensus 51 lv~~~l~G~n~~i~aYG~tgSGKTyTm~Gii~r~l~~lf~~~~~--------~~v~vS~~EIy~E~v~D 111 (279)
+--.++.|||++|..+|... .-+..++...+.-+.. --..+.|=|+|.|.+.+
T Consensus 62 LCLaLLmGYnatiyd~geke--------~~~Q~vLdRs~~vL~~Lp~SLLK~rLLt~CygEv~dE~La~ 122 (162)
T 4epz_A 62 LCLALLMGYNATIYDNGDKE--------RKKQVILDRIYNIMSQLPASLLKMRLLTWGYSETYDEELAH 122 (162)
T ss_dssp HHHHHHHHHHHCSCCCSCHH--------HHHHHHHHHHHTTGGGSCSSHHHHHHHHHHHHHHCCHHHHH
T ss_pred HHHHHHHhccchhhhCccHH--------HHHHHHHHHHHHHHHhCChHHHHHHHHHHHHhhhhhHHHHH
Confidence 33467899999999998753 2233333333333332 22445667777776533
No 424
>1nn5_A Similar to deoxythymidylate kinase (thymidylate K; P-loop, D4TMP, transferase; HET: 2DT ANP; 1.50A {Homo sapiens} SCOP: c.37.1.1 PDB: 1e2e_A* 1e2d_A* 1e2g_A* 1e2q_A* 1e99_A* 1e9a_A* 1e9b_A* 1nmx_A* 1nmz_A* 1nn0_A* 1nn1_A* 1e2f_A* 1nn3_A* 2xx3_A* 1e9c_A* 1e9d_A* 1e9e_A* 1e98_A* 1nmy_A* 1e9f_A*
Probab=24.22 E-value=11 Score=30.09 Aligned_cols=16 Identities=19% Similarity=0.260 Sum_probs=12.5
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|..|||||+..
T Consensus 11 ~I~l~G~~GsGKsT~~ 26 (215)
T 1nn5_A 11 LIVLEGVDRAGKSTQS 26 (215)
T ss_dssp EEEEEESTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4666799999999643
No 425
>3r20_A Cytidylate kinase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, ADP, DCMP, D transferase; 2.00A {Mycobacterium smegmatis} SCOP: c.37.1.0 PDB: 3r8c_A 4die_A*
Probab=24.19 E-value=21 Score=29.99 Aligned_cols=16 Identities=25% Similarity=0.393 Sum_probs=12.3
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.-.|++|||||+..
T Consensus 11 ~i~i~G~~GsGKsTla 26 (233)
T 3r20_A 11 VVAVDGPAGTGKSSVS 26 (233)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566799999999643
No 426
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=24.11 E-value=11 Score=30.43 Aligned_cols=15 Identities=27% Similarity=0.408 Sum_probs=11.6
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|.-.|..|||||+.
T Consensus 6 ~I~i~G~~GSGKST~ 20 (218)
T 1vht_A 6 IVALTGGIGSGKSTV 20 (218)
T ss_dssp EEEEECCTTSCHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 355669999999964
No 427
>2ce2_X GTPase HRAS; signaling protein, guanine nucleotide binding protein, fluor membrane, lipoprotein, palmitate, prenylation; HET: GDP XY2; 1.0A {Homo sapiens} PDB: 2cl0_X* 2cl6_X* 2cl7_X* 2clc_X* 2evw_X* 2cld_X* 1aa9_A* 1ioz_A* 1q21_A* 6q21_A* 3k9l_A* 3k9n_A* 1ctq_A* 1bkd_R 1crp_A* 1crq_A* 1crr_A* 121p_A* 1gnp_A* 1gnq_A* ...
Probab=23.96 E-value=14 Score=27.52 Aligned_cols=14 Identities=36% Similarity=0.506 Sum_probs=11.5
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+..|.+|+|||..
T Consensus 6 i~v~G~~~~GKssl 19 (166)
T 2ce2_X 6 LVVVGAGGVGKSAL 19 (166)
T ss_dssp EEEEESTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 56679999999954
No 428
>3qkt_A DNA double-strand break repair RAD50 ATPase; RECA-like fold, coiled-coils, ATP binding, DNA bindi MRE11, replication; HET: DNA ANP; 1.90A {Pyrococcus furiosus} PDB: 3qku_A* 1ii8_A 3qks_B* 3qkr_B* 1ii8_B
Probab=23.67 E-value=17 Score=32.00 Aligned_cols=16 Identities=38% Similarity=0.638 Sum_probs=12.3
Q ss_pred hhcccCCCceEeehHH
Q psy7226 65 AYGQTGGGKTYTVSAM 80 (279)
Q Consensus 65 aYG~tgSGKTyTm~Gi 80 (279)
-+|++|||||..|..|
T Consensus 28 i~G~NGsGKS~lleAi 43 (339)
T 3qkt_A 28 IIGQNGSGKSSLLDAI 43 (339)
T ss_dssp EECCTTSSHHHHHHHH
T ss_pred EECCCCCCHHHHHHHH
Confidence 5699999999765444
No 429
>3io5_A Recombination and repair protein; storage dimer, inactive conformation, RECA like core domain, binding, DNA damage, DNA recombination; 2.40A {Enterobacteria phage T4}
Probab=23.63 E-value=21 Score=31.82 Aligned_cols=35 Identities=20% Similarity=0.350 Sum_probs=21.5
Q ss_pred HHhHHhhhc-----chh-hhhhhhcccCCCceEeehHHHHH
Q psy7226 49 VPLINHMFN-----GIN-ATLLAYGQTGGGKTYTVSAMIMK 83 (279)
Q Consensus 49 ~plv~~~l~-----G~n-~~i~aYG~tgSGKTyTm~Gii~r 83 (279)
.+-+|.++. |.- ..+.-||+.|+|||..+.-++..
T Consensus 11 i~~LD~~LGg~~~GGl~~GiteI~G~pGsGKTtL~Lq~~~~ 51 (333)
T 3io5_A 11 IPMMNIALSGEITGGMQSGLLILAGPSKSFKSNFGLTMVSS 51 (333)
T ss_dssp CHHHHHHHHSSTTCCBCSEEEEEEESSSSSHHHHHHHHHHH
T ss_pred CHHHHHHhCCCCCCCCcCCeEEEECCCCCCHHHHHHHHHHH
Confidence 455566555 111 13688999999999765444333
No 430
>1tf7_A KAIC; homohexamer, hexamer, circadian clock protein; HET: ATP; 2.80A {Synechococcus SP} SCOP: c.37.1.11 c.37.1.11 PDB: 3s1a_A* 1u9i_A* 2gbl_A* 3dvl_A* 3k0a_A* 3k09_A* 3jzm_A* 3k0e_A* 4dug_A* 3ua2_A* 3k0c_A* 3k0f_A*
Probab=23.60 E-value=11 Score=35.45 Aligned_cols=29 Identities=28% Similarity=0.384 Sum_probs=18.8
Q ss_pred HhHHhhhc-c--hhhhhhhhcccCCCceEeeh
Q psy7226 50 PLINHMFN-G--INATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 50 plv~~~l~-G--~n~~i~aYG~tgSGKTyTm~ 78 (279)
+.++.+.- | ...++.-.|++|||||..+.
T Consensus 26 ~~Ld~i~~G~i~~Ge~~~l~G~nGsGKSTL~~ 57 (525)
T 1tf7_A 26 EGFDDISHGGLPIGRSTLVSGTSGTGKTLFSI 57 (525)
T ss_dssp TTHHHHTTSSEETTSEEEEEESTTSSHHHHHH
T ss_pred hhHHHhcCCCCCCCeEEEEEcCCCCCHHHHHH
Confidence 45565554 2 23345667999999997643
No 431
>3u4q_A ATP-dependent helicase/nuclease subunit A; helicase, nuclease, double strand DNA repair, protein-DNA CO hydrolase-DNA complex; HET: DNA; 2.80A {Bacillus subtilis} PDB: 3u44_A*
Probab=23.52 E-value=19 Score=37.80 Aligned_cols=28 Identities=18% Similarity=0.419 Sum_probs=19.6
Q ss_pred hhhhhhhcccCCCceEeehHHHHHHHHHHHH
Q psy7226 60 NATLLAYGQTGGGKTYTVSAMIMKTLQHVMQ 90 (279)
Q Consensus 60 n~~i~aYG~tgSGKTyTm~Gii~r~l~~lf~ 90 (279)
+..++.-|..|||||++| +.|++..|..
T Consensus 23 ~~~~~v~a~AGSGKT~vl---~~ri~~ll~~ 50 (1232)
T 3u4q_A 23 GQDILVAAAAGSGKTAVL---VERMIRKITA 50 (1232)
T ss_dssp SSCEEEEECTTCCHHHHH---HHHHHHHHSC
T ss_pred CCCEEEEecCCCcHHHHH---HHHHHHHHhc
Confidence 556677788999999994 4555555544
No 432
>2ged_A SR-beta, signal recognition particle receptor beta subunit; protein transport, G protein, proline isomerization, circular permutation; 2.20A {Saccharomyces cerevisiae}
Probab=23.37 E-value=15 Score=28.66 Aligned_cols=16 Identities=25% Similarity=0.432 Sum_probs=13.3
Q ss_pred hhhhhhcccCCCceEe
Q psy7226 61 ATLLAYGQTGGGKTYT 76 (279)
Q Consensus 61 ~~i~aYG~tgSGKTyT 76 (279)
..|+..|.+|+|||..
T Consensus 49 ~~i~vvG~~g~GKSsl 64 (193)
T 2ged_A 49 PSIIIAGPQNSGKTSL 64 (193)
T ss_dssp CEEEEECCTTSSHHHH
T ss_pred CEEEEECCCCCCHHHH
Confidence 4678889999999954
No 433
>2dyk_A GTP-binding protein; GTPase, ribosome-binding protein, structural genomics; HET: GDP; 1.96A {Thermus thermophilus}
Probab=23.25 E-value=15 Score=27.44 Aligned_cols=14 Identities=21% Similarity=0.361 Sum_probs=11.1
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+..|.+|+|||..
T Consensus 4 i~v~G~~~~GKSsl 17 (161)
T 2dyk_A 4 VVIVGRPNVGKSSL 17 (161)
T ss_dssp EEEECCTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 45669999999954
No 434
>1gtv_A TMK, thymidylate kinase; transferase, transferase (ATP:TMP phosphotransferase); HET: TYD TMP; 1.55A {Mycobacterium tuberculosis} SCOP: c.37.1.1 PDB: 1g3u_A* 1gsi_A* 1mrn_A* 1mrs_A* 1n5i_A* 1n5j_A* 1n5k_A* 1n5l_A* 1w2g_A* 1w2h_A*
Probab=23.22 E-value=7.5 Score=31.22 Aligned_cols=14 Identities=29% Similarity=0.399 Sum_probs=10.7
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|.-.|.+|||||+.
T Consensus 3 I~i~G~~GsGKsTl 16 (214)
T 1gtv_A 3 IAIEGVDGAGKRTL 16 (214)
T ss_dssp EEEEEEEEEEHHHH
T ss_pred EEEEcCCCCCHHHH
Confidence 34469999999954
No 435
>1m7g_A Adenylylsulfate kinase; APS kinase, transferase, sulfate Met nucleotide 2 kinase; HET: AV2 ADX ADP; 1.43A {Penicillium chrysogenum} SCOP: c.37.1.4 PDB: 1d6j_A* 1m7h_A* 3cr7_A*
Probab=23.21 E-value=12 Score=30.37 Aligned_cols=16 Identities=25% Similarity=0.358 Sum_probs=12.3
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|+-.|..|||||+.+
T Consensus 27 ~i~~~G~~GsGKsT~~ 42 (211)
T 1m7g_A 27 TIWLTGLSASGKSTLA 42 (211)
T ss_dssp EEEEECSTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 4566799999999643
No 436
>2orv_A Thymidine kinase; TP4A (P1-(5'-adenosyl)P4-(5'- (2'deoxythymidil))tetraphosphate, transferase; HET: 4TA; 2.30A {Homo sapiens} SCOP: c.37.1.24 g.39.1.14
Probab=23.17 E-value=16 Score=30.86 Aligned_cols=24 Identities=13% Similarity=0.106 Sum_probs=18.4
Q ss_pred hhhhhcccCCCceEeehHHHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMKTL 85 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r~l 85 (279)
..+-||.-|||||..+.|++.|..
T Consensus 21 l~v~~G~MgsGKTT~lL~~~~r~~ 44 (234)
T 2orv_A 21 IQVILGPMFSGKSTELMRRVRRFQ 44 (234)
T ss_dssp EEEEECCTTSCHHHHHHHHHHHHH
T ss_pred EEEEECCCCCcHHHHHHHHHHHHH
Confidence 346789999999988777766653
No 437
>2obl_A ESCN; ATPase, hydrolase; 1.80A {Escherichia coli O127} PDB: 2obm_A*
Probab=22.89 E-value=12 Score=33.32 Aligned_cols=30 Identities=23% Similarity=0.438 Sum_probs=19.0
Q ss_pred HHhHHhhhc-chhhhhhhhcccCCCceEeeh
Q psy7226 49 VPLINHMFN-GINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 49 ~plv~~~l~-G~n~~i~aYG~tgSGKTyTm~ 78 (279)
...|+.++. +..-.+--.|+.|+|||.+|-
T Consensus 59 ~~ald~ll~i~~Gq~~gIiG~nGaGKTTLl~ 89 (347)
T 2obl_A 59 VRAIDGLLTCGIGQRIGIFAGSGVGKSTLLG 89 (347)
T ss_dssp CHHHHHHSCEETTCEEEEEECTTSSHHHHHH
T ss_pred CEEEEeeeeecCCCEEEEECCCCCCHHHHHH
Confidence 345666653 333334456999999997754
No 438
>3nh6_A ATP-binding cassette SUB-family B member 6, mitoc; ABC-transporter, ABCB6, nucleotide binding domain, heme BIOS transport protein; 2.00A {Homo sapiens} PDB: 3nh9_A* 3nha_A* 3nhb_A*
Probab=22.84 E-value=8.2 Score=33.96 Aligned_cols=14 Identities=29% Similarity=0.527 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
--.|++|||||+.+
T Consensus 84 aivG~sGsGKSTLl 97 (306)
T 3nh6_A 84 ALVGPSGAGKSTIL 97 (306)
T ss_dssp EEESSSCHHHHHHH
T ss_pred EEECCCCchHHHHH
Confidence 34599999999664
No 439
>3euj_A Chromosome partition protein MUKB, linker; MUKB, MUKE, chromosome condensation, condensin, SMC, N subunit, ABC-type ATPase, WHD, ATP-binding; HET: AGS; 3.10A {Haemophilus ducreyi} PDB: 3euk_A*
Probab=22.46 E-value=13 Score=34.95 Aligned_cols=14 Identities=36% Similarity=0.532 Sum_probs=11.0
Q ss_pred hhhcccCCCceEee
Q psy7226 64 LAYGQTGGGKTYTV 77 (279)
Q Consensus 64 ~aYG~tgSGKTyTm 77 (279)
.-.|++|||||+.|
T Consensus 33 ~liG~nGsGKSTLl 46 (483)
T 3euj_A 33 TLSGGNGAGKSTTM 46 (483)
T ss_dssp EEECCTTSSHHHHH
T ss_pred EEECCCCCcHHHHH
Confidence 34599999999654
No 440
>1w4r_A Thymidine kinase; type II, human, cytosolic, phosphorylation, transferase; HET: TTP; 1.83A {Homo sapiens} PDB: 1xbt_A* 2wvj_A* 2j87_A*
Probab=22.39 E-value=16 Score=30.05 Aligned_cols=15 Identities=20% Similarity=0.204 Sum_probs=12.7
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
..|-||+.|||||.-
T Consensus 22 l~fiyG~MgsGKTt~ 36 (195)
T 1w4r_A 22 IQVILGPMFSGKSTE 36 (195)
T ss_dssp EEEEEECTTSCHHHH
T ss_pred EEEEECCCCCcHHHH
Confidence 567899999999944
No 441
>2o5v_A DNA replication and repair protein RECF; ABC ATPase, walker A motif, P-loop, signature motif, replication/recombination complex; HET: DNA; 1.61A {Deinococcus radiodurans}
Probab=22.17 E-value=19 Score=32.38 Aligned_cols=19 Identities=37% Similarity=0.536 Sum_probs=14.1
Q ss_pred hhhhhcccCCCceEeehHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gi 80 (279)
...-+|++|||||..+..|
T Consensus 28 ~~~i~G~nG~GKttll~ai 46 (359)
T 2o5v_A 28 VTGIYGENGAGKTNLLEAA 46 (359)
T ss_dssp EEEEECCTTSSHHHHHHHH
T ss_pred eEEEECCCCCChhHHHHHH
Confidence 3456799999999776544
No 442
>1zj6_A ADP-ribosylation factor-like protein 5; ARL, GTP-binding, transport protein; HET: G3D; 2.00A {Homo sapiens} SCOP: c.37.1.8
Probab=22.16 E-value=22 Score=27.56 Aligned_cols=22 Identities=27% Similarity=0.439 Sum_probs=16.9
Q ss_pred hhcchhhhhhhhcccCCCceEe
Q psy7226 55 MFNGINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 55 ~l~G~n~~i~aYG~tgSGKTyT 76 (279)
++......|+..|..|+|||..
T Consensus 11 ~~~~~~~~i~v~G~~~~GKssl 32 (187)
T 1zj6_A 11 LFNHQEHKVIIVGLDNAGKTTI 32 (187)
T ss_dssp HHTTSCEEEEEEESTTSSHHHH
T ss_pred hcCCCccEEEEECCCCCCHHHH
Confidence 4555566788889999999953
No 443
>3th5_A RAS-related C3 botulinum toxin substrate 1; rossmann fold, GTPase, GTP binding, protein binding, signali protein; HET: GNP; 2.30A {Homo sapiens}
Probab=27.75 E-value=19 Score=28.48 Aligned_cols=23 Identities=26% Similarity=0.361 Sum_probs=17.3
Q ss_pred hcchhhhhhhhcccCCCceEeeh
Q psy7226 56 FNGINATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 56 l~G~n~~i~aYG~tgSGKTyTm~ 78 (279)
+.....-|+..|.+|+|||..+.
T Consensus 26 ~~~~~~ki~v~G~~~~GKSsli~ 48 (204)
T 3th5_A 26 FQGQAIKCVVVGDGAVGKTCLLI 48 (204)
Confidence 34555667888999999997654
No 444
>1oxx_K GLCV, glucose, ABC transporter, ATP binding protein; ABC-ATPase, ATP-binding cassette, ATPase, transport protein; 1.45A {Sulfolobus solfataricus} SCOP: b.40.6.3 c.37.1.12 PDB: 1oxs_C 1oxt_A 1oxu_A* 1oxv_A*
Probab=22.10 E-value=7.2 Score=35.05 Aligned_cols=14 Identities=36% Similarity=0.567 Sum_probs=11.4
Q ss_pred hhcccCCCceEeeh
Q psy7226 65 AYGQTGGGKTYTVS 78 (279)
Q Consensus 65 aYG~tgSGKTyTm~ 78 (279)
-.|++|||||+.|-
T Consensus 36 llGpnGsGKSTLLr 49 (353)
T 1oxx_K 36 ILGPSGAGKTTFMR 49 (353)
T ss_dssp EECSCHHHHHHHHH
T ss_pred EECCCCCcHHHHHH
Confidence 45999999997754
No 445
>2f9l_A RAB11B, member RAS oncogene family; RAB11B GTPase, vesicle transport, hydrolase; HET: GDP; 1.55A {Homo sapiens} SCOP: c.37.1.8 PDB: 2f9m_A* 1yzk_A* 2hv8_A* 2gzd_A* 2gzh_A* 2d7c_A* 3bfk_A*
Probab=22.09 E-value=10 Score=30.04 Aligned_cols=15 Identities=27% Similarity=0.505 Sum_probs=11.6
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|...|+.|+|||..
T Consensus 7 kv~lvG~~g~GKSTL 21 (199)
T 2f9l_A 7 KVVLIGDSGVGKSNL 21 (199)
T ss_dssp EEEEESSTTSSHHHH
T ss_pred EEEEECcCCCCHHHH
Confidence 345679999999954
No 446
>1z2a_A RAS-related protein RAB-23; RAB GTPase, vesicular trafficking, protein transport; HET: GDP; 1.90A {Mus musculus} SCOP: c.37.1.8 PDB: 1z22_A*
Probab=21.73 E-value=17 Score=27.32 Aligned_cols=15 Identities=20% Similarity=0.355 Sum_probs=11.9
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
-|+..|.+|+|||..
T Consensus 7 ~i~v~G~~~~GKssl 21 (168)
T 1z2a_A 7 KMVVVGNGAVGKSSM 21 (168)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECcCCCCHHHH
Confidence 356679999999954
No 447
>4e22_A Cytidylate kinase; P-loop, CMP/ATP binding, transferase; 2.32A {Yersinia pseudotuberculosis}
Probab=21.28 E-value=21 Score=29.87 Aligned_cols=16 Identities=25% Similarity=0.403 Sum_probs=12.1
Q ss_pred hhhhhcccCCCceEee
Q psy7226 62 TLLAYGQTGGGKTYTV 77 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm 77 (279)
.|.--|++|||||+.+
T Consensus 29 ~I~I~G~~GsGKSTl~ 44 (252)
T 4e22_A 29 VITVDGPSGAGKGTLC 44 (252)
T ss_dssp EEEEECCTTSSHHHHH
T ss_pred EEEEECCCCCCHHHHH
Confidence 3455699999999653
No 448
>2grj_A Dephospho-COA kinase; TM1387, EC 2.7.1.24, dephosphocoenzyme kinase, structural genomics, joint center for structural GE JCSG; HET: ADP COD; 2.60A {Thermotoga maritima}
Probab=21.02 E-value=14 Score=29.84 Aligned_cols=15 Identities=27% Similarity=0.423 Sum_probs=11.6
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|.-.|..|||||+.
T Consensus 14 iIgltG~~GSGKSTv 28 (192)
T 2grj_A 14 VIGVTGKIGTGKSTV 28 (192)
T ss_dssp EEEEECSTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 455669999999954
No 449
>1pui_A ENGB, probable GTP-binding protein ENGB; structural genomics, nysgxrc T16, GTPase, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.37.1.8
Probab=20.95 E-value=11 Score=29.89 Aligned_cols=15 Identities=20% Similarity=0.410 Sum_probs=11.7
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|.-.|++|+|||..+
T Consensus 29 v~lvG~~g~GKSTLl 43 (210)
T 1pui_A 29 VAFAGRSNAGKSSAL 43 (210)
T ss_dssp EEEEECTTSSHHHHH
T ss_pred EEEECCCCCCHHHHH
Confidence 456699999999643
No 450
>3lda_A DNA repair protein RAD51; DNA binding protein, ATP-binding, DNA damage, DNA recombinat repair, nucleotide-binding; HET: DNA; 2.50A {Saccharomyces cerevisiae} PDB: 1szp_A*
Probab=20.93 E-value=23 Score=32.30 Aligned_cols=31 Identities=13% Similarity=0.259 Sum_probs=21.5
Q ss_pred hHHhHHhhhc-chh--hhhhhhcccCCCceEeeh
Q psy7226 48 LVPLINHMFN-GIN--ATLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 48 ~~plv~~~l~-G~n--~~i~aYG~tgSGKTyTm~ 78 (279)
.-+-+|.++. |.. ..+.-+|++|||||..+.
T Consensus 163 G~~~LD~lLgGGI~~Gei~~I~G~sGsGKTTLl~ 196 (400)
T 3lda_A 163 GSKNLDTLLGGGVETGSITELFGEFRTGKSQLCH 196 (400)
T ss_dssp SCHHHHHHTTTSEETTSEEEEEESTTSSHHHHHH
T ss_pred CChhHHHHhcCCcCCCcEEEEEcCCCCChHHHHH
Confidence 3566777774 333 346678999999997654
No 451
>1z3i_X Similar to RAD54-like; recombination ATPase helicase, recombination-DNA binding COM; 3.00A {Danio rerio} SCOP: c.37.1.19 c.37.1.19
Probab=20.91 E-value=26 Score=33.79 Aligned_cols=26 Identities=23% Similarity=0.313 Sum_probs=18.8
Q ss_pred chhhhhhhhcccCCCceEeehHHHHHH
Q psy7226 58 GINATLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 58 G~n~~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
+...+|+| -.+|+|||.++..++...
T Consensus 78 ~~~g~ILa-d~mGlGKT~~~i~~i~~l 103 (644)
T 1z3i_X 78 NSYGCIMA-DEMGLGKTLQCITLIWTL 103 (644)
T ss_dssp TCCEEEEC-CCTTSCHHHHHHHHHHHH
T ss_pred CCCCeEee-eCCCchHHHHHHHHHHHH
Confidence 44567777 579999999877665543
No 452
>3zvl_A Bifunctional polynucleotide phosphatase/kinase; hydrolase-transferase complex, base excision repair, BER, non-homologous END-joining, NHEJ; 1.65A {Mus musculus} PDB: 3zvm_A* 3zvn_A* 1yj5_A 3u7e_B* 3u7f_B* 3u7h_B* 3u7g_A*
Probab=20.71 E-value=15 Score=33.47 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=14.5
Q ss_pred chhhhhhhhcccCCCceEe
Q psy7226 58 GINATLLAYGQTGGGKTYT 76 (279)
Q Consensus 58 G~n~~i~aYG~tgSGKTyT 76 (279)
.....|+..|..|||||+.
T Consensus 256 ~~~~lIil~G~pGSGKSTl 274 (416)
T 3zvl_A 256 PNPEVVVAVGFPGAGKSTF 274 (416)
T ss_dssp SSCCEEEEESCTTSSHHHH
T ss_pred CCCEEEEEECCCCCCHHHH
Confidence 3445677889999999953
No 453
>1ky3_A GTP-binding protein YPT7P; vesicular traffic, GTP hydrolysis, YPT/RAB protein, endocytosis, hydrolase, endocytosis/exocytosis complex; HET: GDP; 1.35A {Saccharomyces cerevisiae} SCOP: c.37.1.8 PDB: 1ky2_A*
Probab=20.19 E-value=19 Score=27.42 Aligned_cols=15 Identities=33% Similarity=0.563 Sum_probs=12.2
Q ss_pred hhhhhcccCCCceEe
Q psy7226 62 TLLAYGQTGGGKTYT 76 (279)
Q Consensus 62 ~i~aYG~tgSGKTyT 76 (279)
.|+..|.+|+|||..
T Consensus 10 ~i~v~G~~~~GKSsl 24 (182)
T 1ky3_A 10 KVIILGDSGVGKTSL 24 (182)
T ss_dssp EEEEECCTTSSHHHH
T ss_pred EEEEECCCCCCHHHH
Confidence 466779999999954
No 454
>2xxa_A Signal recognition particle protein; protein transport, RNA/RNA binding protein, hydrolase, gtpas; HET: GCP; 3.94A {Escherichia coli} PDB: 2j28_9
Probab=20.11 E-value=20 Score=33.04 Aligned_cols=23 Identities=30% Similarity=0.329 Sum_probs=16.5
Q ss_pred hhhhhcccCCCceEeehHHHHHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAMIMKT 84 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gii~r~ 84 (279)
.|+..|..|+|||+|...|....
T Consensus 102 vI~ivG~~GvGKTT~a~~LA~~l 124 (433)
T 2xxa_A 102 VVLMAGLQGAGKTTSVGKLGKFL 124 (433)
T ss_dssp EEEEECSTTSSHHHHHHHHHHHH
T ss_pred EEEEECCCCCCHHHHHHHHHHHH
Confidence 34445999999999877665433
No 455
>1u8z_A RAS-related protein RAL-A; GNP, GTP, GMPPNP, GPPNHP, GDP, GTPase, signaling protein; HET: GDP; 1.50A {Saguinus oedipus} SCOP: c.37.1.8 PDB: 1u8y_A* 1u90_A* 1uad_A* 1zc3_A* 1zc4_A* 2kwi_A* 2ke5_A*
Probab=20.05 E-value=19 Score=26.86 Aligned_cols=14 Identities=29% Similarity=0.468 Sum_probs=11.2
Q ss_pred hhhhcccCCCceEe
Q psy7226 63 LLAYGQTGGGKTYT 76 (279)
Q Consensus 63 i~aYG~tgSGKTyT 76 (279)
|+..|.+|+|||..
T Consensus 7 i~v~G~~~~GKssl 20 (168)
T 1u8z_A 7 VIMVGSGGVGKSAL 20 (168)
T ss_dssp EEEECSTTSSHHHH
T ss_pred EEEECCCCCCHHHH
Confidence 55679999999953
No 456
>3eph_A TRNA isopentenyltransferase; transferase, alternative initiation, ATP-binding, cytoplasm, mitochondrion, nucleotide-binding, nucleus; 2.95A {Saccharomyces cerevisiae} PDB: 3epj_A 3epk_A* 3epl_A*
Probab=20.04 E-value=19 Score=33.04 Aligned_cols=15 Identities=33% Similarity=0.474 Sum_probs=11.4
Q ss_pred hhhhcccCCCceEee
Q psy7226 63 LLAYGQTGGGKTYTV 77 (279)
Q Consensus 63 i~aYG~tgSGKTyTm 77 (279)
|+-.|+||||||...
T Consensus 5 i~i~GptgsGKttla 19 (409)
T 3eph_A 5 IVIAGTTGVGKSQLS 19 (409)
T ss_dssp EEEEECSSSSHHHHH
T ss_pred EEEECcchhhHHHHH
Confidence 445699999999543
No 457
>2wsm_A Hydrogenase expression/formation protein (HYPB); metal binding protein; 2.30A {Archaeoglobus fulgidus}
Probab=20.04 E-value=23 Score=28.32 Aligned_cols=19 Identities=26% Similarity=0.427 Sum_probs=13.1
Q ss_pred hhhhhcccCCCceEeehHH
Q psy7226 62 TLLAYGQTGGGKTYTVSAM 80 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~Gi 80 (279)
.|...|.+|+|||..+.-+
T Consensus 32 ~i~i~G~~g~GKTTl~~~l 50 (221)
T 2wsm_A 32 AVNIMGAIGSGKTLLIERT 50 (221)
T ss_dssp EEEEEECTTSCHHHHHHHH
T ss_pred EEEEEcCCCCCHHHHHHHH
Confidence 4555599999999654333
No 458
>2fu5_C RAS-related protein RAB-8A; MSS4:RAB8 protein complex, GEF:GTPase nucleotide free complex; 2.00A {Mus musculus} SCOP: c.37.1.8 PDB: 3qbt_A* 3tnf_A*
Probab=20.02 E-value=21 Score=27.37 Aligned_cols=17 Identities=41% Similarity=0.575 Sum_probs=8.0
Q ss_pred hhhhhcccCCCceEeeh
Q psy7226 62 TLLAYGQTGGGKTYTVS 78 (279)
Q Consensus 62 ~i~aYG~tgSGKTyTm~ 78 (279)
-|+..|.+|+|||..+.
T Consensus 10 ki~v~G~~~~GKssl~~ 26 (183)
T 2fu5_C 10 KLLLIGDSGVGKTCVLF 26 (183)
T ss_dssp EEEEECCCCC-------
T ss_pred EEEEECCCCCCHHHHHH
Confidence 35677999999997654
Done!