Query psy7227
Match_columns 635
No_of_seqs 345 out of 1883
Neff 7.8
Searched_HMMs 29240
Date Fri Aug 16 21:20:56 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7227.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7227hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3tfg_A ALR2278 protein; heme-b 100.0 1E-45 3.5E-50 358.2 19.1 182 5-208 1-184 (189)
2 2kii_A Putative uncharacterize 100.0 1.7E-44 5.8E-49 347.3 19.3 178 5-207 1-180 (181)
3 3sj5_A Methyl-accepting chemot 100.0 9.8E-44 3.4E-48 343.3 18.3 179 5-209 1-182 (188)
4 2p08_A Signal transduction his 99.9 1.2E-27 4.2E-32 211.7 9.9 115 292-419 1-115 (115)
5 1y10_A Hypothetical protein RV 99.8 7.9E-20 2.7E-24 195.9 13.2 111 509-634 159-288 (407)
6 1ab8_A Adenylyl cyclase; lyase 99.8 1.6E-19 5.6E-24 179.1 10.4 98 534-634 2-113 (220)
7 3uvj_A Guanylate cyclase solub 99.8 5.7E-20 2E-24 183.0 5.9 94 535-635 3-96 (225)
8 2wz1_A Guanylate cyclase solub 99.8 3.5E-19 1.2E-23 176.5 9.7 98 535-635 1-101 (219)
9 1azs_A VC1; complex (lyase/hyd 99.8 3.5E-19 1.2E-23 176.4 8.5 101 527-634 14-115 (220)
10 3et6_A Soluble guanylyl cyclas 99.7 3.4E-18 1.2E-22 165.6 9.8 88 540-634 3-91 (190)
11 1yk9_A Adenylate cyclase; beta 99.7 6.5E-19 2.2E-23 172.7 4.3 90 539-635 3-92 (204)
12 2w01_A Adenylate cyclase; guan 99.7 4.3E-18 1.5E-22 167.4 9.5 87 541-634 9-95 (208)
13 3r5g_A CYAB; adenylyl cyclase, 99.7 2.1E-17 7.2E-22 161.0 8.5 87 541-634 4-92 (198)
14 1wc3_A Adenylate cyclase; solu 99.7 2.6E-17 8.7E-22 163.1 8.8 88 540-634 21-110 (219)
15 1ybt_A Hydrolase, alpha/beta h 99.6 1.5E-16 5E-21 153.3 4.5 83 538-634 9-91 (184)
16 1fx2_A Receptor-type adenylate 99.6 1.3E-15 4.5E-20 152.3 6.6 84 536-634 2-85 (235)
17 3mr7_A Adenylate/guanylate cyc 99.5 2.5E-14 8.6E-19 138.2 8.8 79 541-634 2-81 (189)
18 3hls_A Guanylate cyclase solub 99.3 9.1E-12 3.1E-16 97.7 8.1 65 423-536 2-66 (66)
19 2p08_A Signal transduction his 97.3 1.7E-05 5.8E-10 69.6 -1.5 72 229-300 2-115 (115)
20 1y10_A Hypothetical protein RV 93.5 0.0026 8.8E-08 68.0 -5.6 97 403-503 255-373 (407)
21 2wz1_A Guanylate cyclase solub 91.3 0.038 1.3E-06 53.7 0.0 68 441-510 133-203 (219)
22 1ab8_A Adenylyl cyclase; lyase 91.1 0.0028 9.5E-08 61.9 -8.4 62 441-509 147-211 (220)
23 3hls_A Guanylate cyclase solub 83.4 0.015 5.2E-07 45.2 -6.6 58 304-363 2-59 (66)
24 3et6_A Soluble guanylyl cyclas 80.0 0.11 3.6E-06 49.0 -3.7 60 441-504 125-185 (190)
25 2oso_A Hypothetical protein MJ 73.2 5.1 0.00017 36.7 5.9 47 159-206 111-158 (163)
26 3uvj_A Guanylate cyclase solub 66.8 0.31 1.1E-05 47.3 -4.2 48 441-494 129-179 (225)
27 3i5c_A Fusion of general contr 62.7 90 0.0031 28.3 14.7 73 546-627 61-133 (206)
28 2qv6_A MJ0145, GTP cyclohydrol 60.9 13 0.00046 36.7 6.4 62 543-611 128-190 (268)
29 1ybt_A Hydrolase, alpha/beta h 60.2 1.4 4.9E-05 41.1 -0.8 60 441-504 116-175 (184)
30 1fx2_A Receptor-type adenylate 50.1 1.9 6.4E-05 41.8 -1.9 61 441-505 154-217 (235)
31 1azs_A VC1; complex (lyase/hyd 50.1 1 3.5E-05 43.5 -3.7 62 441-508 149-214 (220)
32 3qyy_A Response regulator; C-D 47.9 93 0.0032 27.1 9.5 58 545-610 41-98 (167)
33 1yk9_A Adenylate cyclase; beta 47.4 2.4 8.1E-05 40.3 -1.6 61 441-506 125-185 (204)
34 3ign_A Diguanylate cyclase; gg 44.9 89 0.003 27.5 9.0 70 545-624 38-107 (177)
35 1yz7_A Probable translation in 44.7 1.4E+02 0.0047 27.8 10.1 128 68-207 14-145 (188)
36 3hva_A Protein FIMX; ggdef dig 39.7 87 0.003 27.5 8.0 70 545-624 43-112 (177)
37 3r5g_A CYAB; adenylyl cyclase, 38.1 5.6 0.00019 37.1 -0.6 55 441-503 132-189 (198)
38 1wc3_A Adenylate cyclase; solu 36.2 5.1 0.00017 38.3 -1.2 58 441-504 155-212 (219)
39 3cue_D Transport protein parti 35.3 88 0.003 29.2 7.3 44 164-208 139-183 (193)
40 3mr7_A Adenylate/guanylate cyc 35.3 4.3 0.00015 37.7 -1.9 59 442-506 111-172 (189)
41 3mtk_A Diguanylate cyclase/pho 34.5 1.6E+02 0.0055 25.9 9.0 59 545-611 35-93 (178)
42 3bre_A Probable two-component 34.0 1.3E+02 0.0045 30.0 9.2 72 545-625 201-272 (358)
43 2w01_A Adenylate cyclase; guan 30.7 8.6 0.00029 36.3 -0.6 59 441-504 134-192 (208)
44 3tvk_A DGC, diguanylate cyclas 28.6 1.9E+02 0.0066 26.2 8.4 68 545-622 32-99 (179)
45 3ezu_A Ggdef domain protein; m 25.5 2.4E+02 0.0082 28.3 9.3 70 545-624 212-281 (342)
46 1w25_A Stalked-cell differenti 25.4 3.4E+02 0.012 28.0 10.9 69 545-623 318-386 (459)
47 3icl_A EAL/ggdef domain protei 23.1 3.6E+02 0.012 23.1 9.3 58 545-610 29-86 (171)
48 2xgv_A PSIV capsid N-terminal 20.6 28 0.00096 30.7 0.8 22 554-579 37-58 (142)
49 2cpg_A REPA protein, transcrip 20.4 1.5E+02 0.0052 19.8 4.6 34 63-96 6-39 (45)
No 1
>3tfg_A ALR2278 protein; heme-based sensor domain, GAS binding, signaling protein; HET: HEM; 1.90A {Nostoc SP} PDB: 3tfd_A* 3tfe_A* 3tff_A* 2o09_A* 2o0c_A* 2o0g_A* 3l6j_A* 3tf8_A* 3tf9_A* 3tfa_A*
Probab=100.00 E-value=1e-45 Score=358.16 Aligned_cols=182 Identities=34% Similarity=0.642 Sum_probs=174.4
Q ss_pred chhHHHHHHHHHHHHhhHHHHHHHHHHhhhhhhhccCCCCCCCCccccCc-CCCeeEEeeeeCcHHHHHHHHHHHHhhCC
Q psy7227 5 VYGFVNYALELLVLKTFGEETWEKINIFSVRICQLRSGAPGPENVWRGDV-GENQFLVRQIYEDEITYNLIGAAVGVLNI 83 (635)
Q Consensus 5 M~G~i~~~~~~~v~~~~G~e~w~~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~Y~d~~~~~l~~~~~~~~g~ 83 (635)
|||+|++++++||+++||+|+|++|+ + + +++ +++.|+++++|||+++.+|++++|+++|+
T Consensus 1 M~G~I~~~l~~~v~~~~G~e~w~~i~----~-----~----------a~~~~~~~f~~~~~Y~D~~~~~lv~~~s~~~g~ 61 (189)
T 3tfg_A 1 MYGLVNKAIQDMISKHHGEDTWEAIK----Q-----K----------AGLEDIDFFVGMEAYSDDVTYHLVGAASEVLGK 61 (189)
T ss_dssp CBHHHHHHHHHHHHHHHCHHHHHHHH----H-----H----------TTCSSCCSCCTTSBCCHHHHHHHHHHHHHHHCC
T ss_pred CeehHHHHHHHHHHHHcCHHHHHHHH----H-----H----------hCCCCCCeEeeeceeChHHHHHHHHHHHHHHCc
Confidence 99999999999999999999999999 8 6 788 77899999999999999999999999999
Q ss_pred CHHHHHHHhhHHHHHhhhhcCchHHHHhhCCChHHhhCCCCchhHHHHHhhhcCCCCCCceEEEecCCCeEEEEEEcCCC
Q psy7227 84 PANTILELFGKTFFEFCQDSGYDKILQVLGATPRDFLQVLNLDALHDHLGTLYPGMRAPSFRCTETDDGALVLHYYSDRP 163 (635)
Q Consensus 84 ~~~~ll~~fG~~~~~~~~~~gy~~~l~~~g~~~~~FL~~~~ld~iH~~v~~~yp~~~~Psf~~~~~~~~~l~l~Y~S~R~ 163 (635)
|.+++|+.||++||+++...||+++++++|+|++|||+ |||+||.+++++||+++||+|+|++.+++++.|||+|+|+
T Consensus 62 ~~~~ll~~fG~~~~~~~~~~~y~~~l~~~g~~l~dFL~--~ld~lH~~v~~~yp~~~~Psf~~~~~~~~~l~l~Y~S~R~ 139 (189)
T 3tfg_A 62 PAEEWWIAFGEYWVTYTSEEGYGELLASAGDSLPEFME--NLDNLHARVGLSFPQLRPPAFECQHTSSKSMELHYQSTRC 139 (189)
T ss_dssp CHHHHHHHHHHHHHHHHHHTTCHHHHHHTCSSHHHHHH--HHHHHHHHHHHHSTTCCCCEEEEEEEETTEEEEEEECSSS
T ss_pred CHHHHHHHHHHHHHHHhhhhhcHHHHHhcCCCHHHHHH--hHHHHHHHHHHhCCCCCCCeEEEEECCCCEEEEEEECCCC
Confidence 99999999999999999888999999999999999999 9999999999999999999999999999999999999999
Q ss_pred ChhhhhhHHHHHHHHHhcCceeEEEEeccc-CCCceEEEEEeecCC
Q psy7227 164 GLEHIVIGIVKTVASKLHNTEVEVEILKTK-EECDHVQFLITETSA 208 (635)
Q Consensus 164 gl~~~~~Gli~~~A~~~f~~~v~i~~~~~~-~~~~~~~f~i~~~~~ 208 (635)
||++|+.|+|+|+|++ |+++|+|++.+++ ++++|++|.|+..+.
T Consensus 140 gl~~~~~Gli~~~A~~-f~~~v~i~~~~~~~~~~~h~~f~i~~~~~ 184 (189)
T 3tfg_A 140 GLAPMVLGLLHGLGKR-FQTKVEVTQTAFRETGEDHDIFSIKYEDS 184 (189)
T ss_dssp SCHHHHHHHHHHHHHH-TTCEEEEEEEECTTTTSSSEEEEEEEEC-
T ss_pred CHHHHHHHHHHHHHHH-hCCCeEEEEEeccCCCCCeEEEEEEECCC
Confidence 9999999999999998 8999999999988 456799999998643
No 2
>2kii_A Putative uncharacterized protein; H-NOX, unknown function; HET: HEM; NMR {Shewanella oneidensis} PDB: 2kil_A*
Probab=100.00 E-value=1.7e-44 Score=347.27 Aligned_cols=178 Identities=15% Similarity=0.290 Sum_probs=171.1
Q ss_pred chhHHHHHHHHHHHHhhHHHHHHHHHHhhhhhhhccCCCCCCCCccccCcCCCeeEEeeeeCcHHHHHHHHHHHHhhCCC
Q psy7227 5 VYGFVNYALELLVLKTFGEETWEKINIFSVRICQLRSGAPGPENVWRGDVGENQFLVRQIYEDEITYNLIGAAVGVLNIP 84 (635)
Q Consensus 5 M~G~i~~~~~~~v~~~~G~e~w~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~d~~~~~l~~~~~~~~g~~ 84 (635)
|||+|+++|++||+++||+|+|++|+ + + ++++++.|+++++|||+++.+|++++|++||+|
T Consensus 1 M~G~I~~~~~~~v~~~~G~e~w~~i~----~-----~----------a~~~~~~f~~~~~Y~D~~~~~lv~a~s~~~g~~ 61 (181)
T 2kii_A 1 MKGIIFNVLEDMVVAQCGMSVWNELL----E-----K----------HAPKDRVYVSAKSYAESELFSIVQDVAQRLNMP 61 (181)
T ss_dssp CCCHHHHHHHHHHHHHTCHHHHHHHH----H-----H----------HCCSSCCCCSSCCTTTTHHHHHHHHHHHHTTCC
T ss_pred CeehHHHHHHHHHHHHcCHHHHHHHH----H-----H----------hCCCCCceeeccccCHHHHHHHHHHHHHHHCcC
Confidence 99999999999999999999999999 8 6 888888999999999999999999999999999
Q ss_pred HHHHHHHhhHHHHHhhhhcCchHHHHhhCCChHHhhCCCCchh-HHHHHhhhcCCCCCCceEEEecCCCeEEEEEEcCCC
Q psy7227 85 ANTILELFGKTFFEFCQDSGYDKILQVLGATPRDFLQVLNLDA-LHDHLGTLYPGMRAPSFRCTETDDGALVLHYYSDRP 163 (635)
Q Consensus 85 ~~~ll~~fG~~~~~~~~~~gy~~~l~~~g~~~~~FL~~~~ld~-iH~~v~~~yp~~~~Psf~~~~~~~~~l~l~Y~S~R~ 163 (635)
.+++|+.||++||++|.+. |+++++ .|+|++|||+ |||+ ||.+++++||+|+||+|+|++.+++++.|||+|+|+
T Consensus 62 ~~~ll~~fG~~~~~~~~~~-y~~~l~-~g~~~~dFL~--~ld~~lH~~v~~~yp~~~~Psf~~~~~~~~~l~l~Y~S~R~ 137 (181)
T 2kii_A 62 IQDVVKAFGQFLFNGLASR-HTDVVD-KFDDFTSLVM--GIHDVIHLEVNKLYHEPSLPHINGQLLPNNQIALRYSSPRR 137 (181)
T ss_dssp HHHHHHHHHHHHHHHHHHH-HHHHHG-GGSSHHHHHT--TTTTTHHHHHHHHSSCSCCCEEEEEECSSSEEEEEEECTTC
T ss_pred HHHHHHHHHHHHHHHHHHH-hHHHHh-cCCCHHHHHH--HHhHHHHHHHHHhCCCCCCCeeEEEECCCCEEEEEEecCCC
Confidence 9999999999999999998 999999 9999999999 9999 999999999999999999999999999999999999
Q ss_pred ChhhhhhHHHHHHHHHhcCceeEEEEeccc-CCCceEEEEEeecC
Q psy7227 164 GLEHIVIGIVKTVASKLHNTEVEVEILKTK-EECDHVQFLITETS 207 (635)
Q Consensus 164 gl~~~~~Gli~~~A~~~f~~~v~i~~~~~~-~~~~~~~f~i~~~~ 207 (635)
|++|+.|+|+|+|++ ||++|+|++.++. ++++|++|.|+..+
T Consensus 138 -l~~~~~Gli~~~A~~-f~~~v~i~~~~~~~~~~~h~~f~i~~~~ 180 (181)
T 2kii_A 138 -LCFCAEGLLFGAAQH-FQQKIQISHDTCMHTGADHCMLIIELQN 180 (181)
T ss_dssp -CHHHHHHHHHHHHHH-TTCCEEEEEEECGGGTCSSEEEEEEECC
T ss_pred -hHHHHHHHHHHHHHH-hCCCeEEEEEeeccCCCCEEEEEEEecC
Confidence 999999999999999 5999999998776 44789999998765
No 3
>3sj5_A Methyl-accepting chemotaxis protein; no or O2-sensing protein, signaling protein; HET: HEM; 1.67A {Caldanaerobacter subterraneus} SCOP: d.278.1.1 PDB: 3nvr_A* 3tf0_A* 1u4h_A* 1u56_A* 3m0b_A* 1u55_A* 3tf1_A* 1xbn_A* 3nvu_A* 3eee_A* 3iqb_A* 3lah_A* 3lai_A*
Probab=100.00 E-value=9.8e-44 Score=343.29 Aligned_cols=179 Identities=13% Similarity=0.194 Sum_probs=170.2
Q ss_pred chhHHHHHHHHHHHHhhHHHHHHHHHHhhhhhhhccCCCCCCCCccccCcC-CCeeEEeeeeCcHHHHHHHHHHHHhhCC
Q psy7227 5 VYGFVNYALELLVLKTFGEETWEKINIFSVRICQLRSGAPGPENVWRGDVG-ENQFLVRQIYEDEITYNLIGAAVGVLNI 83 (635)
Q Consensus 5 M~G~i~~~~~~~v~~~~G~e~w~~i~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~Y~d~~~~~l~~~~~~~~g~ 83 (635)
|||+|+++|++||+++||+|+|++|+ + + ++++ +++|+++++|||+++.+|++++|++||+
T Consensus 1 MkG~I~~~~~~~v~~~yG~e~w~~i~----~-----~----------a~~~~~~~f~~~~~Y~D~~~~~lv~a~s~~~g~ 61 (188)
T 3sj5_A 1 MKGTFVGTWIKTLRDLYGNDVVDESL----K-----S----------VGWEPDRVITPLEDIDDDEVRRIFAKVSEKTGK 61 (188)
T ss_dssp CBHHHHHHHHHHHHHHHCHHHHHHHH----H-----T----------TTCCTTCCCCSSCBCCHHHHHHHHHHHHHHHCC
T ss_pred CeehHHHHHHHHHHHHcCHHHHHHHH----H-----H----------cCCCCCCceeecceeChHHHHHHHHHHHHHHCc
Confidence 99999999999999999999999999 8 6 8884 5789999999999999999999999999
Q ss_pred CHHHHHHHhhHHHHHhhhhcCchHHHHhhCCChHHhhCCCCchhHHHHHhhhcCCCCCCceEEEecCCCeEEEEEEcCCC
Q psy7227 84 PANTILELFGKTFFEFCQDSGYDKILQVLGATPRDFLQVLNLDALHDHLGTLYPGMRAPSFRCTETDDGALVLHYYSDRP 163 (635)
Q Consensus 84 ~~~~ll~~fG~~~~~~~~~~gy~~~l~~~g~~~~~FL~~~~ld~iH~~v~~~yp~~~~Psf~~~~~~~~~l~l~Y~S~R~ 163 (635)
|.+++|+.||++||++|.+. |+++++ |+|++|||+ |||+||.+++++||+|+||+|+|++.+++++.|||+|+|
T Consensus 62 ~~~~ll~~fG~~~~~~~~~~-y~~~l~--g~~~~dFL~--~ld~lH~~v~~~yp~~~~Psf~~~~~~~~~l~l~Y~S~R- 135 (188)
T 3sj5_A 62 NVNEIWREVGRQNIKTFSEW-FPSYFA--GRRLVNFLM--MMDEVHLQLTKMIKGATPPRLIAKPVAKDAIEMEYVSKR- 135 (188)
T ss_dssp CHHHHHHHHHHHHHHHHHHH-CGGGTT--TCCHHHHHH--THHHHHHHTTTTSTTCCCCEEEEEEEETTEEEEEEEETT-
T ss_pred CHHHHHHHHHHHHHHHHHHh-HHHHhC--CCCHHHHHH--HHHHHHHHHHHhCCCCCCCeEEEEECCCCEEEEEEECCC-
Confidence 99999999999999999998 999998 899999999 999999999999999999999999999999999999999
Q ss_pred ChhhhhhHHHHHHHHHhcCceeEEEEeccc--CCCceEEEEEeecCCc
Q psy7227 164 GLEHIVIGIVKTVASKLHNTEVEVEILKTK--EECDHVQFLITETSAP 209 (635)
Q Consensus 164 gl~~~~~Gli~~~A~~~f~~~v~i~~~~~~--~~~~~~~f~i~~~~~~ 209 (635)
||++|+.|+|+|+|++ |+++|+|++.+++ +++.|++|.|++++..
T Consensus 136 gl~~~~~Gli~~aa~~-f~~~v~i~~~~~~~~~~~~~~~~rl~f~~~~ 182 (188)
T 3sj5_A 136 KMYDYFLGLIEGSSKF-FKEEISVEEVERGEKDGFSRLKVRIKFKNPV 182 (188)
T ss_dssp CCHHHHHHHHHHHHHH-HTCCEEEEEEEEEEETTEEEEEEEEEESSCC
T ss_pred CHHHHHHHHHHHHHHH-hCCCeEEEEecccCCCCceEEEEEEEeeChh
Confidence 8999999999988888 8999999999977 3456999999998764
No 4
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A
Probab=99.94 E-value=1.2e-27 Score=211.67 Aligned_cols=115 Identities=28% Similarity=0.528 Sum_probs=101.2
Q ss_pred CCChhhhhhcCCCeeeeCCcceeeehhhhHHhhcccccccccCchhhhhccccCccccCHHHHHhhcCCeEEEEeCCCCC
Q psy7227 292 KISPATFCRLFPFHIMFDRDLVIEQVGTALSRVIPCLGEMSNCTLTHILDPVRPHLDLTFDNILAHINTVYVLKTKPGIM 371 (635)
Q Consensus 292 ~i~~~~f~~~fPfHi~fdrdl~i~~~G~~l~~~l~~~~~~~g~~l~d~f~~~rP~~~~t~~~ll~~~~~~fvl~~~~~~~ 371 (635)
++++++||++||||++||+|++|+|+|++++|.+|... .|.++.|+|+++||.+.+||++|+.++|++|+|+++.
T Consensus 1 ~i~~~~f~~lFPfHlvfd~~~~I~q~G~~L~k~~p~~~--~g~~~~d~F~l~RP~~~~tf~~i~~~~n~~f~L~~~~--- 75 (115)
T 2p08_A 1 MLSPELLAKAFPFHFAFSRNREIVQTGEVLERISPEPL--VGKLIEQHFQINRPKILIDFDAISKQPRALFILEFLH--- 75 (115)
T ss_dssp CCCHHHHHHHCTTCEEECTTCBEEEECHHHHHHCSSCC--TTSBGGGTEEEEESSCCSCHHHHHTCTTSCEEEEETT---
T ss_pred CcChHHHHHhCCeEEEECCCCEEEEeccHHHHhCcccc--CCCChhHeEEEeCCCcccCHHHHHhhcCCEEEEEEcC---
Confidence 47899999999999999999999999999999998754 5899999999999999999999999999999999853
Q ss_pred CCCccccccccceeccEEEecCCCeeeeecCCCccchhhhhhcCeeec
Q psy7227 372 QTGAEECYSTLRIKGQMLYVPESDLMIFLCYPSVVNLDDLTRRGLFIS 419 (635)
Q Consensus 372 ~~~~~~~~~~l~LkGqM~y~~~~~~ilfl~sP~v~~le~l~~~gl~ls 419 (635)
+.++|||||+|++++++++|+|||++.++|+|.+.|||+|
T Consensus 76 --------~~l~LKGqm~~~~e~~~ilfL~sP~v~~l~~l~~~GL~l~ 115 (115)
T 2p08_A 76 --------NGMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAPLGIKLK 115 (115)
T ss_dssp --------TCCEEEEEEEEETTTTEEEEEEEECCCTTCCC--------
T ss_pred --------CCcEEEEEEEEcCCCCEEEEEeCCCcCCHHHHHHcCcccC
Confidence 5699999999999999999999999999999999999985
No 5
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=99.81 E-value=7.9e-20 Score=195.88 Aligned_cols=111 Identities=23% Similarity=0.279 Sum_probs=97.7
Q ss_pred hhhhhhhhHHHHHHhhCc-------HHHHHHHhcCCCC------------CCcccceeEEEEeeecCcchhcccccCCcc
Q psy7227 509 EYITSLLSSVRLLYSVLP-------ASVANELRHKRPV------------PPKRFDCVTLLFSGIVGFSDYCATHTDSKG 569 (635)
Q Consensus 509 ~~~~~~~~~~~ll~~~lP-------~~va~~l~~~~~~------------~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~ 569 (635)
...++++++++||++++| +.|+++|+.+... ...++++|||||+||+|||.++++++
T Consensus 159 ~~~ee~~kse~LL~~iLP~L~~~l~~~va~~L~~~~~~~~v~~~~r~~~~~~~~~~~vTVlFaDIvgFT~ls~~~~---- 234 (407)
T 1y10_A 159 TELDIAKGSQALVSQIVPLLGPMIQDMLFMQLRHMMETEAVNAGERAAGKPLPGARQVTVAFADLVGFTQLGEVVS---- 234 (407)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCCTTCEEEEEEEEEECSBCTTSCBCC----
T ss_pred CcHhHHHHHHHHHHHhcccccccchHHHHHHHHhcccchhhhhhhhcccccccceeeEEEEEEEccCchHHHhhCC----
Confidence 345677889999999999 9999999877432 23468999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHHHHHHHHhhhhh
Q psy7227 570 AMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCIARLALHPKNSR 634 (635)
Q Consensus 570 p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~~~~Al~m~~~~ 634 (635)
|++++.+||+||+.++.++. |+ |+|+|||||+|||+||+|. +++++|++|++.+
T Consensus 235 p~evv~lLn~~~~~~~~i~~-~~---g~~iKtiGDa~mavfg~p~-------~a~~~Al~m~~~l 288 (407)
T 1y10_A 235 AEELGHLAGRLAGLARDLTA-PP---VWFIKTIGDAVMLVCPDPA-------PLLDTVLKLVEVV 288 (407)
T ss_dssp HHHHHHHHHHHHHHHHHHCC-TT---CEEEEEETTEEEEEESSHH-------HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHH-cC---cEEEEEecceEEEEECCHH-------HHHHHHHHHHHHH
Confidence 99999999999999998887 78 9999999999999999874 5889999998865
No 6
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=99.79 E-value=1.6e-19 Score=179.07 Aligned_cols=98 Identities=23% Similarity=0.455 Sum_probs=84.9
Q ss_pred hcCCCCCCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCC---CCCCEEEEEEeCcEEEEEe
Q psy7227 534 RHKRPVPPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPK---KNPNVYKVETVGDKYMAVS 610 (635)
Q Consensus 534 ~~~~~~~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~---~~~~~~k~ktiGD~ymav~ 610 (635)
++++...++++++|||||+||+|||.++++++.+..|++++.+||++|+.||+++.+| + |+|+||+||+|||+|
T Consensus 2 ~~~~~~~~~~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g---~~~ik~iGD~~ma~f 78 (220)
T 1ab8_A 2 LKNEELYHQSYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSG---VEKIKTIGSTYMAAT 78 (220)
T ss_dssp -----CCEEEEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTT---EEEEEEETTEEEEEE
T ss_pred CCCCcccccccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCC---eEEEEEeCceEEEEE
Confidence 3566777899999999999999999999988533448999999999999999999997 6 999999999999999
Q ss_pred CCCC-----------CChhHHHHHHHHHHHhhhhh
Q psy7227 611 GLPV-----------SCQDHARCIARLALHPKNSR 634 (635)
Q Consensus 611 G~p~-----------~~~~ha~~~~~~Al~m~~~~ 634 (635)
|+|. ..++||.+|+++|++|++.+
T Consensus 79 g~p~~~~~~~~~~~~~~~~~a~~a~~~Al~~~~~l 113 (220)
T 1ab8_A 79 GLSAIPSQEHAQEPERQYMHIGTMVEFAYALVGKL 113 (220)
T ss_dssp CCCCSCCC--------CCHHHHHHHHHHHHHHHHH
T ss_pred CCCccccccccccccccHHHHHHHHHHHHHHHHHH
Confidence 9998 46799999999999999865
No 7
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.78 E-value=5.7e-20 Score=183.01 Aligned_cols=94 Identities=40% Similarity=0.656 Sum_probs=88.1
Q ss_pred cCCCCCCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCC
Q psy7227 535 HKRPVPPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPV 614 (635)
Q Consensus 535 ~~~~~~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~ 614 (635)
+|+...++++++|||||+||+|||+++++++ |++++.+||++|+.|++++.+|+ |+++||+||+|||+||+|.
T Consensus 3 ~g~~~~~~~~~~vtvlF~Di~gfT~l~~~~~----~~~~~~~ln~~~~~~~~~i~~~~---g~v~k~~GD~~ma~fg~p~ 75 (225)
T 3uvj_A 3 QGQVVQAKKFSNVTMLFSDIVGFTAICSQCS----PLQVITMLNALYTRFDQQCGELD---VYKVETIGDAYCVAGGLHK 75 (225)
T ss_dssp --CEEEEEEEEEEEEEEEEETTHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHHT---CEEECCSTTCEEEEESSSS
T ss_pred CCCccCCcccceEEEEEEEccChHHHHhcCC----HHHHHHHHHHHHHHHHHHHHhcC---eEEEEeeCcEEEEEECCCC
Confidence 4666678899999999999999999999999 99999999999999999999999 9999999999999999999
Q ss_pred CChhHHHHHHHHHHHhhhhhC
Q psy7227 615 SCQDHARCIARLALHPKNSRK 635 (635)
Q Consensus 615 ~~~~ha~~~~~~Al~m~~~~~ 635 (635)
+.++||.+|+.+|++|++.++
T Consensus 76 ~~~~~a~~a~~~al~~~~~~~ 96 (225)
T 3uvj_A 76 ESDTHAVQIALMALKMMELSD 96 (225)
T ss_dssp CCTTHHHHHHHHHHHHHHHHT
T ss_pred CchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999998753
No 8
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.77 E-value=3.5e-19 Score=176.54 Aligned_cols=98 Identities=62% Similarity=1.023 Sum_probs=86.9
Q ss_pred cCCCCCCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcC---CCCCCCEEEEEEeCcEEEEEeC
Q psy7227 535 HKRPVPPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTD---PKKNPNVYKVETVGDKYMAVSG 611 (635)
Q Consensus 535 ~~~~~~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~---~~~~~~~~k~ktiGD~ymav~G 611 (635)
+|+...++++++|||||+||+|||.+++++++...|++++.+||+||+.|++++. .|+ |+|+||+||+|||+||
T Consensus 1 ~G~~~~~~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~---g~~~k~~GD~~ma~fg 77 (219)
T 2wz1_A 1 HKRPVPAKRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPF---VYKVETVGDKYMTVSG 77 (219)
T ss_dssp ----CCCEEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTT---CEEECCCTTCEEEEES
T ss_pred CCCccCccceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCC---EEEEeecCCEEEEEEC
Confidence 3667788999999999999999999999886555599999999999999999999 778 9999999999999999
Q ss_pred CCCCChhHHHHHHHHHHHhhhhhC
Q psy7227 612 LPVSCQDHARCIARLALHPKNSRK 635 (635)
Q Consensus 612 ~p~~~~~ha~~~~~~Al~m~~~~~ 635 (635)
+|.+.++||.+|+++|++|++.++
T Consensus 78 ~p~~~~~~a~~A~~~Al~~~~~~~ 101 (219)
T 2wz1_A 78 LPEPCIHHARSICHLALDMMEIAG 101 (219)
T ss_dssp SSSCCTTHHHHHHHHHHHHHHHHT
T ss_pred CCCCChhHHHHHHHHHHHHHHHHH
Confidence 999999999999999999998763
No 9
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.77 E-value=3.5e-19 Score=176.44 Aligned_cols=101 Identities=28% Similarity=0.477 Sum_probs=87.6
Q ss_pred HHHHHHHhcCCCC-CCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcE
Q psy7227 527 ASVANELRHKRPV-PPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDK 605 (635)
Q Consensus 527 ~~va~~l~~~~~~-~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ 605 (635)
...+.+....... ..+++++|||||+||+|||.++++++ |++++.+||++|+.|++++.+|+ |+++||+||+
T Consensus 14 ~~~~~~~~~~~~~l~~~~~~~vtvlF~DI~gfT~l~e~~~----~~~~~~~Ln~~~~~~~~~i~~~g---G~v~k~iGD~ 86 (220)
T 1azs_A 14 DINAKQEDMMFHKIYIQKHDNVSILFADIEGFTSLASQCT----AQELVMTLNELFARFDKLAAENH---CLRIKILGDC 86 (220)
T ss_dssp -------CCSSCCCEEEEEEEEEEEEEEEETHHHHHHHSC----HHHHHHHHHHHHHHHHHHHHHHT---EEEEEEETTE
T ss_pred cccccccccccccccccccccEEEEEEEccChHHHHhhCC----HHHHHHHHHHHHHHHHHHHHHcC---cEEEEEeCCe
Confidence 3445555544433 47788999999999999999999999 99999999999999999999999 9999999999
Q ss_pred EEEEeCCCCCChhHHHHHHHHHHHhhhhh
Q psy7227 606 YMAVSGLPVSCQDHARCIARLALHPKNSR 634 (635)
Q Consensus 606 ymav~G~p~~~~~ha~~~~~~Al~m~~~~ 634 (635)
|||+||+|.+.++||.+|+++|++|++.+
T Consensus 87 ~ma~fg~p~~~~~~a~~Av~~Al~m~~~l 115 (220)
T 1azs_A 87 YYCVSGLPEARADHAHCCVEMGMDMIEAI 115 (220)
T ss_dssp EEEEESCSSCCSTHHHHHHHHHHHHHHHH
T ss_pred EEEEECCCCCChHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999875
No 10
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.74 E-value=3.4e-18 Score=165.58 Aligned_cols=88 Identities=34% Similarity=0.699 Sum_probs=84.4
Q ss_pred CCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCC-CCCCEEEEEEeCcEEEEEeCCCCCChh
Q psy7227 540 PPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPK-KNPNVYKVETVGDKYMAVSGLPVSCQD 618 (635)
Q Consensus 540 ~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~-~~~~~~k~ktiGD~ymav~G~p~~~~~ 618 (635)
.++++++|||||+||+|||+++++++ |++++.+||++|+.+++++.+| | ++++|++||+|||+||+|.+.++
T Consensus 3 ~~~e~~~vtvlf~Di~gft~l~~~~~----~~~~~~~l~~~~~~~~~~i~~~~g---~~~vk~~GD~~~a~fg~~~~~~~ 75 (190)
T 3et6_A 3 PAQEHPEATVLFSDIVGFTEIASRSS----PLEVXSLLDELYQRFDAAIEEYPQ---LYKVETIGDAYMVVCNVTVPCDD 75 (190)
T ss_dssp CCEEEEEEEEEEEEETTHHHHTTTSC----HHHHHHHHHHHHHHHHHHGGGCTT---EEEEECTTSCEEEEESSSSCCST
T ss_pred CccccceEEEEEeEecChhHhHhhCC----HHHHHHHHHHHHHHHHHHHHHcCC---EEEEEEeCCEEEEEECCCCCchh
Confidence 46788999999999999999999999 9999999999999999999999 7 99999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhh
Q psy7227 619 HARCIARLALHPKNSR 634 (635)
Q Consensus 619 ha~~~~~~Al~m~~~~ 634 (635)
||.+|+++|++|++.+
T Consensus 76 ~~~~a~~~al~~~~~~ 91 (190)
T 3et6_A 76 HADVLLEFALRMHEEA 91 (190)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999999865
No 11
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.74 E-value=6.5e-19 Score=172.71 Aligned_cols=90 Identities=33% Similarity=0.662 Sum_probs=84.3
Q ss_pred CCCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChh
Q psy7227 539 VPPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQD 618 (635)
Q Consensus 539 ~~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ 618 (635)
..++++++|||||+||+|||.++++++ |++++.+||++|+.+++++.+|+ |+++||+||+|||+||+|.+.++
T Consensus 3 ~~~~~~~~vtvlf~DI~gfT~l~~~~~----~~~~~~~ln~~~~~~~~~i~~~g---G~v~k~~GD~~ma~fg~p~~~~~ 75 (204)
T 1yk9_A 3 IIADKYDEASVLFADIVGFTERASSTA----PADLVRFLDRLYSAFDELVDQHG---LEKIEVSGDSYMVVSGVPRPRPD 75 (204)
T ss_dssp ---CCCSCEEEEEEEESCSSCSSCCCC----SSSTTTHHHHHHTTTTGGGTTSS---CEECCCSSSCEEEESCCSSCCTT
T ss_pred CCccccCcEEEEEEEccChHHHHhcCC----HHHHHHHHHHHHHHHHHHHHHcC---CEEEEEeCCeEEEEECCCCCChH
Confidence 346789999999999999999999999 99999999999999999999999 99999999999999999999999
Q ss_pred HHHHHHHHHHHhhhhhC
Q psy7227 619 HARCIARLALHPKNSRK 635 (635)
Q Consensus 619 ha~~~~~~Al~m~~~~~ 635 (635)
|+.+|+++|++|++.++
T Consensus 76 ~a~~A~~~Al~~~~~~~ 92 (204)
T 1yk9_A 76 HTQALADFALDMTNVAA 92 (204)
T ss_dssp HHHHHHTHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 99999999999998763
No 12
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=99.73 E-value=4.3e-18 Score=167.35 Aligned_cols=87 Identities=21% Similarity=0.209 Sum_probs=83.8
Q ss_pred CcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHH
Q psy7227 541 PKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHA 620 (635)
Q Consensus 541 ~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha 620 (635)
..++++|||||+||+|||+++++++ |++++.+||++|+.+++++.+|+ |+++||+||+|||+||+|.+.++||
T Consensus 9 ~~e~~~vtvlf~Di~gfT~l~~~~~----~~~~~~~l~~~~~~~~~~i~~~~---G~v~k~~GD~~~a~fg~p~~~~~~a 81 (208)
T 2w01_A 9 GGDRRPITILTSDLRGFTSTSEGLN----PEEVVKVLNIYFGKMADVITHHG---GTIDEFMGDGILVLFGAPTSQQDDA 81 (208)
T ss_dssp CCEEEEEEEEEEECTTHHHHGGGSC----HHHHHHHHHHHHHHHHHHHHHTT---CEEEEEETTEEEEEESSSSCCTTHH
T ss_pred CCeEEEEEEEEEEecChHHHHhhCC----HHHHHHHHHHHHHHHHHHHHHcC---CEEEEEEcCEEEEEECCCCCChhHH
Confidence 5678999999999999999999999 99999999999999999999999 9999999999999999999999999
Q ss_pred HHHHHHHHHhhhhh
Q psy7227 621 RCIARLALHPKNSR 634 (635)
Q Consensus 621 ~~~~~~Al~m~~~~ 634 (635)
.+|+++|++|++.+
T Consensus 82 ~~Av~~Al~~~~~l 95 (208)
T 2w01_A 82 LRAVACGVEMQLAL 95 (208)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999998865
No 13
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=99.69 E-value=2.1e-17 Score=161.00 Aligned_cols=87 Identities=18% Similarity=0.225 Sum_probs=82.5
Q ss_pred CcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCC--hh
Q psy7227 541 PKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSC--QD 618 (635)
Q Consensus 541 ~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~--~~ 618 (635)
..+.++|||||+||+|||.++++++ |++++.+||++|+.+++++.+|+ |+++||+||+|||+||+|... ++
T Consensus 4 ~~e~~~vtvlf~Di~gft~l~~~~~----~~~~~~~l~~~~~~~~~~i~~~~---G~v~k~~GD~~~a~fg~p~~~~~~~ 76 (198)
T 3r5g_A 4 ETQRKKLTVFFSDIRGFTELSEELE----AEALTDLLNNYLNEMSKIALKYG---GTIDKFVGDCVMVFFGDPSTQGAKK 76 (198)
T ss_dssp CCEEEEEEEEEEEEETHHHHHTTSC----HHHHHHHHHHHHHHHHHHHHHHT---CEEEEEETTEEEEEESSSSCSCHHH
T ss_pred CceEEEEEEEEEEccccchhhhhCC----HHHHHHHHHHHHHHHHHHHHHcC---CEEEeeeCCEEEEEECCCcccccHH
Confidence 4567899999999999999999999 99999999999999999999999 999999999999999999986 78
Q ss_pred HHHHHHHHHHHhhhhh
Q psy7227 619 HARCIARLALHPKNSR 634 (635)
Q Consensus 619 ha~~~~~~Al~m~~~~ 634 (635)
||.+|+.+|++|++.+
T Consensus 77 ~a~~a~~~al~i~~~~ 92 (198)
T 3r5g_A 77 DAVAAVSMGIAMRKHM 92 (198)
T ss_dssp HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHH
Confidence 9999999999998765
No 14
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=99.69 E-value=2.6e-17 Score=163.14 Aligned_cols=88 Identities=22% Similarity=0.223 Sum_probs=82.3
Q ss_pred CCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCC--h
Q psy7227 540 PPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSC--Q 617 (635)
Q Consensus 540 ~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~--~ 617 (635)
...+.++|||||+||+|||+++++++ |++++.+||++|+.+++++.+|+ |+++||+||+|||+||+|... .
T Consensus 21 l~~e~~~vtvlF~DI~gfT~l~~~~~----~~~~~~~Ln~~~~~~~~~i~~~g---G~v~k~iGD~~ma~fg~p~~~~~~ 93 (219)
T 1wc3_A 21 MRPEPRLITILFSDIVGFTRMSNALQ----SQGVAELLNEYLGEMTRAVFENQ---GTVDKFVGDAIMALYGAPEEMSPS 93 (219)
T ss_dssp CCCEEEEEEEEEEEEESHHHHHHTSC----HHHHHHHHHHHHHHHHHHHHHTT---CEEEEEETTEEEEEESSSSCCCHH
T ss_pred cCCceeEEEEEEEEecChHHHHhhCC----HHHHHHHHHHHHHHHHHHHHHcC---CEEEEEEcCeEEEEECCCCCCCCh
Confidence 35667899999999999999999999 99999999999999999999999 999999999999999999864 5
Q ss_pred hHHHHHHHHHHHhhhhh
Q psy7227 618 DHARCIARLALHPKNSR 634 (635)
Q Consensus 618 ~ha~~~~~~Al~m~~~~ 634 (635)
+||.+|+++|++|++.+
T Consensus 94 ~~a~~Av~~Al~~~~~l 110 (219)
T 1wc3_A 94 EQVRRAIATARQMLVAL 110 (219)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH
Confidence 89999999999999865
No 15
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=99.62 E-value=1.5e-16 Score=153.34 Aligned_cols=83 Identities=18% Similarity=0.098 Sum_probs=75.0
Q ss_pred CCCCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCCh
Q psy7227 538 PVPPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQ 617 (635)
Q Consensus 538 ~~~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~ 617 (635)
.....+++++||||+||+|||.++++++ |++++.+||++|+.+++++.+|+ |+++||+||+|||+||.|
T Consensus 9 ~~~~~~~~~~tvlf~Di~gft~l~~~~~----~~~~~~~l~~~~~~~~~~i~~~g---G~v~k~~GD~~ma~f~~p---- 77 (184)
T 1ybt_A 9 HHGSAERMLATIMFTDIVGSTQHAAALG----DDRWRDLLDNHDTIVCHEIQRFG---GREVNTAGDGFVATFTSP---- 77 (184)
T ss_dssp ----CEEEEEEEEEEEETTHHHHHHHHH----HHHHHHHHHHHHHHHHHHHHHTT---CEECCCSSSSEEEEESCH----
T ss_pred CCCCCceEEEEEEEEECcCcHHHHHhCC----HHHHHHHHHHHHHHHHHHHHHcC---CEEEeEeCCEEEEEeCCH----
Confidence 3346778999999999999999999999 99999999999999999999999 999999999999999976
Q ss_pred hHHHHHHHHHHHhhhhh
Q psy7227 618 DHARCIARLALHPKNSR 634 (635)
Q Consensus 618 ~ha~~~~~~Al~m~~~~ 634 (635)
.+|+++|++|++.+
T Consensus 78 ---~~A~~~Al~~~~~l 91 (184)
T 1ybt_A 78 ---SAAIACADDIVDAV 91 (184)
T ss_dssp ---HHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHH
Confidence 46899999999865
No 16
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=99.57 E-value=1.3e-15 Score=152.35 Aligned_cols=84 Identities=25% Similarity=0.284 Sum_probs=74.8
Q ss_pred CCCCCCcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCC
Q psy7227 536 KRPVPPKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVS 615 (635)
Q Consensus 536 ~~~~~~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~ 615 (635)
++...++.+++|||||+||+|||.++++ . |++++.+||++|+.|++++.+|+ |+++||+||+|||+||+|.
T Consensus 2 ~~~~~~~~~~~vtvlF~DI~gfT~l~~~-~----~~~~~~~l~~~~~~~~~~i~~~~---G~v~k~~GD~~ma~fg~p~- 72 (235)
T 1fx2_A 2 NNRAPKEPTDPVTLIFTDIESSTALWAA-H----PDLMPDAVAAHHRMVRSLIGRYK---CYEVKTVGDSFMIASKSPF- 72 (235)
T ss_dssp GGGSCCCTTSCEEEEEEEETTHHHHHHH-C----TTTHHHHHHHHHHHHHHHHHHTT---CEEEEEETTEEEEEESCHH-
T ss_pred CCcCCCCCCCcEEEEEEeccChHHHHHH-C----HHHHHHHHHHHHHHHHHHHHHcC---CEEEEEcCCeEEEEeCCHH-
Confidence 3445678899999999999999999997 4 79999999999999999999999 9999999999999999863
Q ss_pred ChhHHHHHHHHHHHhhhhh
Q psy7227 616 CQDHARCIARLALHPKNSR 634 (635)
Q Consensus 616 ~~~ha~~~~~~Al~m~~~~ 634 (635)
+|+++|++|++.+
T Consensus 73 ------~A~~~Al~i~~~l 85 (235)
T 1fx2_A 73 ------AAVQLAQELQLCF 85 (235)
T ss_dssp ------HHHHHHHHHHHHH
T ss_pred ------HHHHHHHHHHHHH
Confidence 5788888887754
No 17
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=99.50 E-value=2.5e-14 Score=138.19 Aligned_cols=79 Identities=16% Similarity=0.127 Sum_probs=71.3
Q ss_pred CcccceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHH-HHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhH
Q psy7227 541 PKRFDCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTT-YDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDH 619 (635)
Q Consensus 541 ~~~~~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~-fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~h 619 (635)
..+.++|||||+||+|||.++++++ |+++ ..||++|.. +++++.+|+ |+++|++||+|||+||.
T Consensus 2 ~~e~r~vtvlf~Di~gft~l~~~~~----~~~~-~~l~~~~~~~~~~~i~~~~---G~v~k~~GD~~~a~f~~------- 66 (189)
T 3mr7_A 2 NAERRLCAILAADMAGYSRLMERNE----TDVL-NRQKLYRRELIDPAIAQAG---GQIVKTTGDGMLARFDT------- 66 (189)
T ss_dssp CCEEEEEEEEEEEECCCCGGGCCCC----HHHH-HHHHHHHHHTHHHHHHHTT---CEEEEEETTEEEEEESS-------
T ss_pred CCcEEEEEEEEEEchhhHHHHhhCC----HHHH-HHHHHHHHHHHHHHHHHcC---CEEEEEeCCEEEEEeCC-------
Confidence 3567899999999999999999988 7665 888999988 999999999 99999999999999994
Q ss_pred HHHHHHHHHHhhhhh
Q psy7227 620 ARCIARLALHPKNSR 634 (635)
Q Consensus 620 a~~~~~~Al~m~~~~ 634 (635)
+.+|+++|++|++.+
T Consensus 67 ~~~A~~~Al~i~~~l 81 (189)
T 3mr7_A 67 AQAALRCALEIQQAM 81 (189)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 588999999999865
No 18
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=99.28 E-value=9.1e-12 Score=97.69 Aligned_cols=65 Identities=72% Similarity=0.996 Sum_probs=61.7
Q ss_pred CCCchhhHHHHHHHhHHHHHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCCCceEEeeceeeeccCCchhhHH
Q psy7227 423 LHDATRDLVLMSEQFEADYKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVW 502 (635)
Q Consensus 423 ihd~~rdmill~~~~~~~~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~ 502 (635)
+||++||+|++++|+.++++|..+++..+++|++.+..++.|++++++
T Consensus 2 ~Hd~tRdlvl~~~q~~ae~~L~~~lE~~~~~Lee~t~~L~~EK~ktd~-------------------------------- 49 (66)
T 3hls_A 2 SHMATRDLVLLGEQFREEYKLTQELEMLTDRLQLTLRALEDEKKKTDT-------------------------------- 49 (66)
T ss_dssp CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
T ss_pred CCcchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH--------------------------------
Confidence 699999999999999999999999999999999999999999999888
Q ss_pred HHhhcchhhhhhhhHHHHHHhhCcHHHHHHHhcC
Q psy7227 503 FLSRGKEYITSLLSSVRLLYSVLPASVANELRHK 536 (635)
Q Consensus 503 l~~r~~~~~~~~~~~~~ll~~~lP~~va~~l~~~ 536 (635)
||++|||+.||++|+.|
T Consensus 50 -----------------LL~~mLP~~VA~~Lk~G 66 (66)
T 3hls_A 50 -----------------LLYSVLPPSVANELRHK 66 (66)
T ss_dssp -----------------HHHHTSCHHHHHHHHC-
T ss_pred -----------------HHHHcCCHHHHHHHhCc
Confidence 99999999999999976
No 19
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A
Probab=97.34 E-value=1.7e-05 Score=69.55 Aligned_cols=72 Identities=19% Similarity=0.270 Sum_probs=44.5
Q ss_pred CCccccccCCCCceecccchhhhhhhhcccc-ccch--------hhhhcccCC---------------------------
Q psy7227 229 ISPATFCRLFPFHIMFDRDKVEVEILKTKEE-CDHV--------QFLITETSA--------------------------- 272 (635)
Q Consensus 229 ~~~~~f~~~Fpf~~~~d~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~--------------------------- 272 (635)
+++.+||++||||++||++++++.++.+... ++.. .|.+.+|..
T Consensus 2 i~~~~f~~lFPfHlvfd~~~~I~q~G~~L~k~~p~~~~g~~~~d~F~l~RP~~~~tf~~i~~~~n~~f~L~~~~~~l~LK 81 (115)
T 2p08_A 2 LSPELLAKAFPFHFAFSRNREIVQTGEVLERISPEPLVGKLIEQHFQINRPKILIDFDAISKQPRALFILEFLHNGMQLK 81 (115)
T ss_dssp CCHHHHHHHCTTCEEECTTCBEEEECHHHHHHCSSCCTTSBGGGTEEEEESSCCSCHHHHHTCTTSCEEEEETTTCCEEE
T ss_pred cChHHHHHhCCeEEEECCCCEEEEeccHHHHhCccccCCCChhHeEEEeCCCcccCHHHHHhhcCCEEEEEEcCCCcEEE
Confidence 4678899999999999999996665443321 1110 122222221
Q ss_pred ------CcccccCccchhhcccCCCCCChhhhhh
Q psy7227 273 ------PERVELPQIEEIETLSLEPKISPATFCR 300 (635)
Q Consensus 273 ------~~~~~~~~l~~~~~~~~~~~i~~~~f~~ 300 (635)
++++.+.++|+|...+.+++...|+|+|
T Consensus 82 Gqm~~~~e~~~ilfL~sP~v~~l~~l~~~GL~l~ 115 (115)
T 2p08_A 82 GQMMYQPEEEVIFFLGSPWITDTTSLAPLGIKLK 115 (115)
T ss_dssp EEEEEETTTTEEEEEEEECCCTTCCC--------
T ss_pred EEEEEcCCCCEEEEEeCCCcCCHHHHHHcCcccC
Confidence 7888899999999999999999988875
No 20
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=93.46 E-value=0.0026 Score=67.95 Aligned_cols=97 Identities=14% Similarity=0.196 Sum_probs=66.5
Q ss_pred CCccchhhhhhcCeeecCCCC--CCchhhHHHHHHHhHH----------------HHHHHHhHHHHHHHHHHHHHhhhhh
Q psy7227 403 PSVVNLDDLTRRGLFISDIPL--HDATRDLVLMSEQFEA----------------DYKLTRNLEFLTDKLQQTYRELEGE 464 (635)
Q Consensus 403 P~v~~le~l~~~gl~lsdlpi--hd~~rdmill~~~~~~----------------~~~L~~~~~~~~~~Le~~~~~L~~e 464 (635)
+..+++++++|.+|++.+.|. .+++.+|......... .++++|++||+++||+.. ...++
T Consensus 255 ~~g~~iKtiGDa~mavfg~p~~a~~~Al~m~~~l~~~~~~l~iRIGIhtG~Vv~Gvydv~GdtVN~AsRLes~--a~~g~ 332 (407)
T 1y10_A 255 PPVWFIKTIGDAVMLVCPDPAPLLDTVLKLVEVVDTDNNFPRLRAGVASGMAVSRAGDWFGSPVNVASRVTGV--ARPGA 332 (407)
T ss_dssp TTCEEEEEETTEEEEEESSHHHHHHHHHHHHHHHHTCTTSCCEEEEEEEEEEEEETTEEEEHHHHHHHHHHHH--CCTTC
T ss_pred cCcEEEEEecceEEEEECCHHHHHHHHHHHHHHHHHhCCCceEEEEEEEEEEEEecCccCCCHHHHHHHHHhc--CCCCe
Confidence 457889999999999999883 2333333322211100 167899999999999999 45677
Q ss_pred hhhhhhhccCCCCCC----CCceEEeeceeeeccCCchhhHHH
Q psy7227 465 KQKTDRLLCSPDNED----PQFQFEYRGPVTMKGKSEPMEVWF 503 (635)
Q Consensus 465 ~~~~~~~l~~~~~~~----~~~~~~~rg~v~ikg~~~~l~~~l 503 (635)
|..+..... .+.. ..|.++.+|.+.+||+..++..|.
T Consensus 333 I~vS~~t~~--~l~~~~~~~~f~~~~~G~v~lKGk~~~v~~y~ 373 (407)
T 1y10_A 333 VLVADSVRE--ALGDAPEADGFQWSFAGPRRLRGIRGDVRLFR 373 (407)
T ss_dssp EEEEHHHHH--SCCCC---CCCEEEEEEEECCTTCCSCEEEEE
T ss_pred EEECHHHHH--HHhcccccCceEEEEeceEEeCCCCCceEEEE
Confidence 777544211 2223 589999999999999976665553
No 21
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=91.30 E-value=0.038 Score=53.73 Aligned_cols=68 Identities=50% Similarity=0.764 Sum_probs=51.9
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhh---hhhccCCCCCCCCceEEeeceeeeccCCchhhHHHHhhcchh
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKT---DRLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFLSRGKEY 510 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~---~~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~~r~~~~ 510 (635)
|.+.|+++++++||+.. ...+++..+ .+++..+......|.++.+|.+.+||+..++..|.+.+....
T Consensus 133 ~~v~Gd~VN~AaRLe~~--a~~~~IlvS~~~~~~l~~~~~~~~~~~~~~~g~~~lKG~~~~~~vy~l~~~~~~ 203 (219)
T 2wz1_A 133 YCLFGNTVNLTSRTETT--GEKGKINVSEYTYRCLMSPENSDPQFHLEHRGPVSMKGKKEPMQVWFLSRKNTG 203 (219)
T ss_dssp EEEESHHHHHHHHHHHT--SCTTSEEEEHHHHHHTTSTTTCCTTEEEEEEEEECCTTCSSCEEEEEEEESCCC
T ss_pred EEEECHHHHHHHHHHhc--CCCCeEEECHHHHHHHhhhcccCCceEEEEeCCEEecCCCccEEEEEEeccCcC
Confidence 57789999999999998 446666653 344443333467899999999999999999998877765543
No 22
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=91.12 E-value=0.0028 Score=61.93 Aligned_cols=62 Identities=18% Similarity=0.254 Sum_probs=29.6
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhh---hhccCCCCCCCCceEEeeceeeeccCCchhhHHHHhhcch
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTD---RLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFLSRGKE 509 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~---~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~~r~~~ 509 (635)
|+++|+++++++||+.. ...+++..+. +++. +..|.++.+|.+.+||+..+.++|+..+...
T Consensus 147 y~v~Gd~VN~AaRle~~--a~~g~I~vS~~~~~~l~-----~~~~~~~~~g~~~lKG~~~~~~~~~~~~~~~ 211 (220)
T 1ab8_A 147 YDIWGNTVNVASRMDST--GVLDKIQVTEETSLILQ-----TLGYTCTCRGIINVKGKGDLKTYFVNTEMSR 211 (220)
T ss_dssp EEEESHHHHHHHHHHHT--CCTTCEEECHHHHHHHH-----HHTCCCCC---------------CCC-----
T ss_pred EEEECcHHHHHHHHHhc--CCCCeEEECHHHHHHhh-----cCceEEEEeccEEecCCCceEEEEEecccCC
Confidence 46789999999999998 4446666533 3222 2258899999999999999999987766543
No 23
>3hls_A Guanylate cyclase soluble subunit beta-1; coiled-coil domain, signaling helix, S-helix, CGMP biosynthesis, cytoplasm, GTP-binding, heme, iron; 2.15A {Rattus norvegicus}
Probab=83.44 E-value=0.015 Score=45.18 Aligned_cols=58 Identities=24% Similarity=0.123 Sum_probs=50.1
Q ss_pred CeeeeCCcceeeehhhhHHhhcccccccccCchhhhhccccCccccCHHHHHhhcCCeEE
Q psy7227 304 FHIMFDRDLVIEQVGTALSRVIPCLGEMSNCTLTHILDPVRPHLDLTFDNILAHINTVYV 363 (635)
Q Consensus 304 fHi~fdrdl~i~~~G~~l~~~l~~~~~~~g~~l~d~f~~~rP~~~~t~~~ll~~~~~~fv 363 (635)
.| +.+||+++.+.++..+..+....|.....|.+....+.-+++.| |++|+.+.|+.|
T Consensus 2 ~H-d~tRdlvl~~~q~~ae~~L~~~lE~~~~~Lee~t~~L~~EK~kt-d~LL~~mLP~~V 59 (66)
T 3hls_A 2 SH-MATRDLVLLGEQFREEYKLTQELEMLTDRLQLTLRALEDEKKKT-DTLLYSVLPPSV 59 (66)
T ss_dssp CC-CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHTSCHHH
T ss_pred CC-cchHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHcCCHHH
Confidence 58 99999999999999999987777666788888888888788888 999999998765
No 24
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=79.99 E-value=0.11 Score=49.03 Aligned_cols=60 Identities=17% Similarity=0.267 Sum_probs=43.0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCC-CCCCceEEeeceeeeccCCchhhHHHH
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDN-EDPQFQFEYRGPVTMKGKSEPMEVWFL 504 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~-~~~~~~~~~rg~v~ikg~~~~l~~~l~ 504 (635)
+.+.|++++++++|+... ..+++..+..... .+ ....|.++.+|.+.+||+....+||+.
T Consensus 125 ~~v~G~~Vn~Aarl~~~a--~~~~I~vs~~~~~--~l~~~~~~~~~~~g~~~lkG~~~~~~y~l~ 185 (190)
T 3et6_A 125 FXLFGDTVNTASRMESHG--EAGQIHISEACYC--CLRSKERFEIRERGNITVKGKGTMRTYLLS 185 (190)
T ss_dssp EEEESHHHHHHHHHHHTS--CTTSEEEEHHHHH--HCSCGGGTCCCCEEEECCSSSSCEEEEEEC
T ss_pred EEecCcchhHHHHHHhcC--CCCeEEECHHHHH--HhCcCCceEEEEcCCEEecCCCeEEEEEEe
Confidence 567899999999999984 4566666433111 11 135799999999999999886666543
No 25
>2oso_A Hypothetical protein MJ1460; structural genomics, joint center for structural genomics; HET: MSE; 1.90A {Methanocaldococcus jannaschii dsm 2661ORGANISM_TAXID} SCOP: d.278.1.3 PDB: 2osd_A*
Probab=73.15 E-value=5.1 Score=36.66 Aligned_cols=47 Identities=15% Similarity=0.265 Sum_probs=41.8
Q ss_pred EcCCCChhhhhhHHHHHHHHHhcCceeEEEEeccc-CCCceEEEEEeec
Q psy7227 159 YSDRPGLEHIVIGIVKTVASKLHNTEVEVEILKTK-EECDHVQFLITET 206 (635)
Q Consensus 159 ~S~R~gl~~~~~Gli~~~A~~~f~~~v~i~~~~~~-~~~~~~~f~i~~~ 206 (635)
.+.+| .|++..|.+.|+.+.+++.++.+...+|. .+.++|+|.+...
T Consensus 111 ~~~~p-vC~~~~G~~aG~~s~~~g~~~~~~E~~C~a~G~~~C~F~~~~~ 158 (163)
T 2oso_A 111 SKEEP-IHDFIAGILAGCLEEIFYYYFVVNEVECVSQGKDKCVFEVKEV 158 (163)
T ss_dssp CCSSC-CCHHHHHHHHHHHHHHHCSEEEEEEEECGGGTCSSEEEEEEEE
T ss_pred CCCCc-eeHHHHHHHHHHHHHHhCCCeEEEEeEeEcCCCCeEEEEEEEH
Confidence 67788 99999999999999999999999999988 4557999999764
No 26
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=66.78 E-value=0.31 Score=47.33 Aligned_cols=48 Identities=25% Similarity=0.303 Sum_probs=36.5
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhh---hhccCCCCCCCCceEEeeceeeecc
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTD---RLLCSPDNEDPQFQFEYRGPVTMKG 494 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~---~~l~~~~~~~~~~~~~~rg~v~ikg 494 (635)
|+++|+++++++||+.. ...+++..+. +++. ..+.|.++.+|.+.+|+
T Consensus 129 ~~~~Gd~VN~AaRle~~--a~~~~I~vS~~~~~~l~----~~~~~~~~~~g~~~lk~ 179 (225)
T 3uvj_A 129 YCLFGNNVTLANKFESC--SVPRKINVSPTTYRLLK----DCPGFVFTPRSREELPP 179 (225)
T ss_dssp EEEESHHHHHHHHHHHT--SCTTCEEECHHHHHHHT----TSTTEEEEECCSTTSCT
T ss_pred EEEECcHHHHHHHHHhc--CCCCeEEECHHHHHhhc----CCCceEEEEcCcEEecC
Confidence 67889999999999999 4566666633 3333 24689999999999953
No 27
>3i5c_A Fusion of general control protein GCN4 and WSPR R regulator protein; C-DI-GMP, ggdef, leucine zipper, signaling protein; HET: C2E; 1.94A {Pseudomonas aeruginosa PAO1} PDB: 3i5b_A*
Probab=62.67 E-value=90 Score=28.27 Aligned_cols=73 Identities=18% Similarity=0.165 Sum_probs=53.1
Q ss_pred eeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHHHH
Q psy7227 546 CVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCIAR 625 (635)
Q Consensus 546 ~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~~~ 625 (635)
..++++.||.+|..+..... ...-=.+|.++-..+...+...+ ...-.+=||.++++. |....+.+...++
T Consensus 61 ~~~l~~idid~f~~in~~~G----~~~gd~~L~~ia~~L~~~~~~~~---~~~~R~~~d~F~il~--~~~~~~~~~~~~~ 131 (206)
T 3i5c_A 61 QLSLLMIDVDYFKSYNDTFG----HVAGDEALRQVAGAIREGCSRSS---DLAARYGGEEFAMVL--PGTSPGGARLLAE 131 (206)
T ss_dssp CEEEEEEEETTHHHHHHHHC----HHHHHHHHHHHHHHHHTTCCSTT---CEEEEEETTEEEEEE--ETCCHHHHHHHHH
T ss_pred cEEEEEEECcchhHHHhccC----hhHHHHHHHHHHHHHHHhcCCCC---cEEEEecCCeEEEEE--CCCCHHHHHHHHH
Confidence 58999999999999998888 77777777777777777664444 566688899998886 3344455554444
Q ss_pred HH
Q psy7227 626 LA 627 (635)
Q Consensus 626 ~A 627 (635)
-.
T Consensus 132 ~i 133 (206)
T 3i5c_A 132 KV 133 (206)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 28
>2qv6_A MJ0145, GTP cyclohydrolase III, MJGC; enzyme, FAPY; HET: GTP; 2.00A {Methanocaldococcus jannaschii}
Probab=60.94 E-value=13 Score=36.74 Aligned_cols=62 Identities=15% Similarity=0.033 Sum_probs=54.7
Q ss_pred ccceeEEEEeeecCcchh-cccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeC
Q psy7227 543 RFDCVTLLFSGIVGFSDY-CATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSG 611 (635)
Q Consensus 543 ~~~~vtvlF~Di~gFt~~-~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G 611 (635)
....|+|...||.+||.. ....+ |-++....++++..+-+.+++++ +.....=||-||+++.
T Consensus 128 ~dsqIaVahiDI~d~t~~~t~~~s----~yd~~~~~l~l~~~Ll~y~~~ig---G~lf~iGgdny~iftt 190 (268)
T 2qv6_A 128 VDGYVQIAHIDINNITGTLTDIVS----AYDTYLNVNKVKLALMEELLKYN---ALLFFIGGDNFMAPSN 190 (268)
T ss_dssp SSCCEEEEEEEETTHHHHTTTTSC----HHHHHHHHHHHHHHHHHHHHTTT---CCCEEEETTEEEEECT
T ss_pred CcCceEEEEEEecCccccccccCC----hHHHHHHHHHHHHHHHHHHHHhC---CEEEEECCCEEEEEeC
Confidence 356799999999999984 44456 99999999999999999999999 9988888899999986
No 29
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=60.21 E-value=1.4 Score=41.11 Aligned_cols=60 Identities=12% Similarity=0.085 Sum_probs=43.0
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCCCceEEeeceeeeccCCchhhHHHH
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFL 504 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~ 504 (635)
+.+.|+++++++||+.... .+++..+..... .+....|.++.+|.+.+||+.+++..|.+
T Consensus 116 ~~~~G~~Vn~AaRl~~~a~--~g~IlvS~~~~~--~l~~~~~~~~~~g~~~lkG~~~~~~vy~l 175 (184)
T 1ybt_A 116 TDVAGVAVHIGARVCALAG--PSEVLVSSTVRD--IVAGSRHRFAERGEQELKGVPGRWRLCVL 175 (184)
T ss_dssp EEEESHHHHHHHHHHHHSC--TTCEEEEHHHHH--HTTTSSCCEEEEEEECCTTSSSCEEEEEE
T ss_pred ceEECcHHHHHHHHHhcCC--CCEEEECHHHHH--hhcccCceEEEcCCEEecCCCCcEEEEEE
Confidence 4466889999999999844 456655443111 12246899999999999999988776543
No 30
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=50.14 E-value=1.9 Score=41.78 Aligned_cols=61 Identities=16% Similarity=0.269 Sum_probs=44.5
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCC---CCCceEEeeceeeeccCCchhhHHHHh
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNE---DPQFQFEYRGPVTMKGKSEPMEVWFLS 505 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~---~~~~~~~~rg~v~ikg~~~~l~~~l~~ 505 (635)
++++|+++++++||+.... .+++..+..... ... ...|.++.+|.+.+||+.+++..|.+.
T Consensus 154 ~~v~Gd~VN~AaRle~~a~--~g~IlvS~~~~~--~l~~~~~~~~~~~~~g~~~lkG~~~~v~vy~l~ 217 (235)
T 1fx2_A 154 YDYYGRTPNMAARTESVAN--GGQVLMTHAAYM--SLSAEDRKQIDVTALGDVALRGVSDPVKMYQLN 217 (235)
T ss_dssp EEEESHHHHHHHHHHHTCC--TTCEEEEHHHHH--TSCHHHHHTCCEEEEEEECCTTCSSCEEEEEEC
T ss_pred eEEECHHHHHHHHHHhhcC--CCEEEECHHHHH--HHhhhcccCceeEecccEEecccCCceEEEEEe
Confidence 4567899999999999844 677766544221 111 256999999999999999988776443
No 31
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=50.11 E-value=1 Score=43.54 Aligned_cols=62 Identities=15% Similarity=0.108 Sum_probs=38.4
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCCCceEEeec----eeeeccCCchhhHHHHhhcc
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNEDPQFQFEYRG----PVTMKGKSEPMEVWFLSRGK 508 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~~~~~~~~~rg----~v~ikg~~~~l~~~l~~r~~ 508 (635)
|+++|++++++++|+.. ...+++..+.... ..+ .+.|.+++.+ .+.+||+. ..+|++..+..
T Consensus 149 y~v~Gd~VN~AaRLe~~--a~~g~IlvS~~t~--~~l-~~~f~~~~~~~~~r~~~lKg~~-v~~Y~l~~~~~ 214 (220)
T 1azs_A 149 FDVWSNDVTLANHMEAG--GKAGRIHITKATL--SYL-NGDYEVEPGCGGERNAYLKEHS-IETFLILRCTQ 214 (220)
T ss_dssp CEEESHHHHHHHHHHHT--CCTTSEEECSTTT--TTT-TTCSCEEECCGGGTCHHHHHTT-CCCEEEC----
T ss_pred EEEEchHHHHHHHHHhc--CCCCeEEECHHHH--Hhh-cCceEEEECcCccccceecCCc-eEEEEEecccc
Confidence 56779999999999998 4446776655421 122 3578898853 34678875 34555544433
No 32
>3qyy_A Response regulator; C-DI-GMP, DGC, ggdef, competitive inhibition, xanthomonas Ca signaling protein-inhibitor complex; HET: C2E; 1.90A {Xanthomonas campestris PV}
Probab=47.85 E-value=93 Score=27.13 Aligned_cols=58 Identities=9% Similarity=-0.020 Sum_probs=46.2
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEe
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVS 610 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~ 610 (635)
..+++++.||-+|..+..... ...-=.+|.++-..+...+... ...-.+=||.++++.
T Consensus 41 ~~~~l~~idid~f~~in~~~G----~~~gd~~L~~ia~~L~~~~~~~----~~~~R~~~deF~il~ 98 (167)
T 3qyy_A 41 WPFVLFVLDMDNLKPINDRFG----HLAGDRVLVRLVESAYGWLGAQ----DWIGRWGGDEFLIGV 98 (167)
T ss_dssp CCCEEEEEEESSHHHHHHHHC----HHHHHHHHHHHHHHHTTTCCTT----CEEEEEETTEEEEEE
T ss_pred CcEEEEEEechhhhHHHhhcC----cHHHHHHHHHHHHHHHHhcCCC----CEEEeecCceEEEEc
Confidence 358999999999999998887 7776677777777777776654 467788899998876
No 33
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=47.41 E-value=2.4 Score=40.25 Aligned_cols=61 Identities=20% Similarity=0.317 Sum_probs=42.8
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCCCceEEeeceeeeccCCchhhHHHHhh
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFLSR 506 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~~r 506 (635)
|.+.|++++++++|+.. ...+++..+...... + ...|.++.+|.+.+||+.....+++..+
T Consensus 125 ~~v~G~~Vn~AaRle~~--a~~g~I~vs~~~~~~--l-~~~~~~~~~g~~~lkG~~~~~~y~l~~~ 185 (204)
T 1yk9_A 125 YCVWGDAVNVASRMEST--DSVGQIQVPDEVYER--L-KDDFVLRERGHINVKGKGVMRTWYLIGR 185 (204)
T ss_dssp CCEEEHHHHHTTHHHHS--CSTTCEEBCHHHHHC--C-TTCEEEEECCCCCCSSSSSCCCCEEEEE
T ss_pred EEEEChHHHHHHHHHhc--CCCCeEEECHHHHHH--h-hcCeeEEEcceEEecCCCccEEEEEEec
Confidence 44567899999999988 445666665432221 1 2479999999999999986655655443
No 34
>3ign_A Diguanylate cyclase; ggdef domain, A1U3W3_marav, NESG, MQR89A, structural genomics, PSI-2, protein structure initiative; HET: C2E; 1.83A {Marinobacter aquaeolei VT8}
Probab=44.92 E-value=89 Score=27.55 Aligned_cols=70 Identities=13% Similarity=0.109 Sum_probs=51.8
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHHH
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCIA 624 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~~ 624 (635)
...++++.||.+|..+..... ...-=.+|.++-..+...+...+ ..-.+=||.++++. |....+.+...+
T Consensus 38 ~~~~l~~i~id~f~~in~~~G----~~~gd~~L~~ia~~L~~~~~~~~----~~~R~~~d~F~ill--~~~~~~~~~~~~ 107 (177)
T 3ign_A 38 QATSLVMFDIDHFKPVNDTYG----HLAGDEVIRHTADVTRNNIRQSD----SAGRYGGEEFGIIL--PETDAESARVIC 107 (177)
T ss_dssp CCEEEEEEEETTHHHHHHHHC----HHHHHHHHHHHHHHHHTTSCTTS----EEEECSSSEEEEEE--ETCCHHHHHHHH
T ss_pred CceEEEEEEchhhHHHHHhhC----hHHHHHHHHHHHHHHHHhCCCCC----EEEEecCCeEEEEe--CCCCHHHHHHHH
Confidence 358999999999999998888 77777778888888877776654 56678889988876 334444444433
No 35
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=44.69 E-value=1.4e+02 Score=27.75 Aligned_cols=128 Identities=16% Similarity=0.100 Sum_probs=78.4
Q ss_pred HHHHHHHHHHHHhhCCCHHHHHHHhhHHHHHhhhhcCchHHHHhhCCChHHhhCCCCc-hhHHHHHhh-hcCCCCCCceE
Q psy7227 68 EITYNLIGAAVGVLNIPANTILELFGKTFFEFCQDSGYDKILQVLGATPRDFLQVLNL-DALHDHLGT-LYPGMRAPSFR 145 (635)
Q Consensus 68 ~~~~~l~~~~~~~~g~~~~~ll~~fG~~~~~~~~~~gy~~~l~~~g~~~~~FL~~~~l-d~iH~~v~~-~yp~~~~Psf~ 145 (635)
....+++.-+|+.+|.+.+++++.+|-.+...+... |+.|=.+.-.+. +-|.-+ + +..-+.+.. .-.+++||...
T Consensus 14 qkv~sil~~vAek~~~~~Eely~~i~w~L~~kyG~~-ydaFk~av~~~~-~vl~~l-ip~~~~~~L~~~i~~~l~~q~vk 90 (188)
T 1yz7_A 14 QKAENLLKLAAEKLGKDFETAWREVWVPLEEEWGEV-YAAFEDAAKDGI-DVLKGH-VPDEWLPVLKEIIDNYVEVPTVT 90 (188)
T ss_dssp HHHHHHHHHHHHHTTCCHHHHHHHTHHHHHHHHSSH-HHHHHHHHHHCG-GGSBTT-BCTTHHHHHHHHHHHHSCCCCEE
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHhCcH-HHHHHHHHhcCh-HHHHHh-CCHHHHHHHHHHHHHhCCCCceE
Confidence 456788899999999999999999999998877654 776655542122 445411 2 112222221 22358899888
Q ss_pred EEecCCCeEEEEEEcCCCChhhhhhHHHHHHH--HHhcCceeEEEEecccCCCceEEEEEeecC
Q psy7227 146 CTETDDGALVLHYYSDRPGLEHIVIGIVKTVA--SKLHNTEVEVEILKTKEECDHVQFLITETS 207 (635)
Q Consensus 146 ~~~~~~~~l~l~Y~S~R~gl~~~~~Gli~~~A--~~~f~~~v~i~~~~~~~~~~~~~f~i~~~~ 207 (635)
+. +-+.|.++++-+ .-.+=.-|..|.+ .--=+.+|+|..+. +..++++++..+
T Consensus 91 Ir----a~ieltc~~~dG-Ie~IK~AL~~a~~~~~~~~~~~ikI~lvg----aP~Y~i~~~~~D 145 (188)
T 1yz7_A 91 ID----AEFEITVPKPNG-VEIIKEALIRARDRANKEKDVEVKFTYLG----APRYRIDITAPD 145 (188)
T ss_dssp EE----EEEEEECCSTTH-HHHHHHHHHHHHHHHHTSTTCEEEEEECS----TTEEEEEEEESS
T ss_pred EE----EEEEEEeCCCch-HHHHHHHHHHHHhcccCCCCCcEEEEEEc----CcEEEEEEeeCC
Confidence 75 346788777654 6666666655433 21012345555543 346677776544
No 36
>3hva_A Protein FIMX; ggdef diguanylate cyclase, biofilm, C-DI-GMP, transferase; 2.04A {Pseudomonas aeruginosa PAO1}
Probab=39.67 E-value=87 Score=27.54 Aligned_cols=70 Identities=16% Similarity=0.107 Sum_probs=50.4
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHHH
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCIA 624 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~~ 624 (635)
...++++.||.+|..+..... ...-=.+|..+-..+...+...+ ..-.+=||.++++. |....+.+...+
T Consensus 43 ~~~~l~~i~id~f~~in~~~G----~~~gd~~L~~~a~~L~~~~~~~~----~~~R~~~d~F~ill--~~~~~~~~~~~~ 112 (177)
T 3hva_A 43 KPSTLAYIHLNGYPSLQADHG----LSGIDLLLGQLAGLMREQFGEEA----DLARFGDSIFAALF--KGKTPEQAQAAL 112 (177)
T ss_dssp CCEEEEEEEETTHHHHHHHHH----HHHHHHHHHHHHHHHHHHHGGGC----EEEECSSSEEEEEE--ETCCHHHHHHHH
T ss_pred CCeEEEEEeCCCHHHHHHHhC----chhHHHHHHHHHHHHHHhCCCCc----eEEEecCCeEEEEe--CCCCHHHHHHHH
Confidence 468999999999999988877 66666677777777777776543 56677889998876 334444444433
No 37
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=38.12 E-value=5.6 Score=37.11 Aligned_cols=55 Identities=20% Similarity=0.334 Sum_probs=40.9
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhh---hhccCCCCCCCCceEEeeceeeeccCCchhhHHH
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTD---RLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWF 503 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~---~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l 503 (635)
|.+.|++++++++|+... ..+++..+. +++. +.|.++.+|.+.+||+.+++..|-
T Consensus 132 ~~v~G~~Vn~Aarl~~~a--~~~~I~vs~~~~~~l~------~~~~~~~~g~~~lkG~~~p~~vy~ 189 (198)
T 3r5g_A 132 YTIIGREVNLASRLESAS--EAGEILISHETYSLIK------DVIMCRDKGQIAVKGFSRPVQIYQ 189 (198)
T ss_dssp EEEESHHHHHHHHHHHHC--CTTCEEEEHHHHHHHT------TTSCEEEEEEECCTTCSSCEEEEE
T ss_pred EEEECcHHHHHHHHHhhC--CCCcEEECHHHHHHhh------cCceEEEcccEEeecCCCcEEEEE
Confidence 445688999999999984 346665533 3322 468999999999999998887653
No 38
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=36.20 E-value=5.1 Score=38.34 Aligned_cols=58 Identities=14% Similarity=0.133 Sum_probs=40.5
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCCCceEEeeceeeeccCCchhhHHHH
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFL 504 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~ 504 (635)
|.+.|+++++++||+.... .+++..+..... .+ ..+.++.+|.+.+||+.+++..|.+
T Consensus 155 y~v~Gd~VN~AaRLe~~a~--~g~IlvS~~~~~--~l--~~~~~~~~g~~~lKG~~~~v~vy~v 212 (219)
T 1wc3_A 155 FTAIGPSVNIAARLQEATA--PNSIMVSAMVAQ--YV--PDEEIIKREFLELKGIDEPVMTCVI 212 (219)
T ss_dssp EEEESHHHHHHHHHHHHSC--TTEEEEEHHHHT--TS--CGGGEEEEEEECCTTCSSCEEEEEE
T ss_pred EEEECHHHHHHHHHHhcCC--CCeEEECHHHHH--hh--cccceeEeeeEEecccCCcEEEEEE
Confidence 4456889999999999844 566666443211 11 1236889999999999988876644
No 39
>3cue_D Transport protein particle 22 kDa subunit; membrane traffic, GEF, tethering complex, RAB activation, GU nucleotide exchange factor; HET: PLM; 3.70A {Saccharomyces cerevisiae}
Probab=35.34 E-value=88 Score=29.20 Aligned_cols=44 Identities=9% Similarity=0.090 Sum_probs=33.7
Q ss_pred ChhhhhhHHHHHHHHHhcCceeEEEEecccCC-CceEEEEEeecCC
Q psy7227 164 GLEHIVIGIVKTVASKLHNTEVEVEILKTKEE-CDHVQFLITETSA 208 (635)
Q Consensus 164 gl~~~~~Gli~~~A~~~f~~~v~i~~~~~~~~-~~~~~f~i~~~~~ 208 (635)
-++.|+.|+|+|+-.. .+.+|+++..+.... .+...|.|.+.+.
T Consensus 139 ~y~~f~cGIIrGaL~~-~g~~Vta~~~~d~l~g~~~t~~~Ikf~~~ 183 (193)
T 3cue_D 139 WYSNILCGVLKGSLEM-VQLDCDVWFVSDILRGDSQTEIKVKLNRI 183 (193)
T ss_dssp CTTHHHHHHHHHHHHH-TTCCCEEEECCCSSSSSSCBCEEEECCCC
T ss_pred chhhhHHHHHHHHHHh-CCCEEEEEEeeccCCCCCCEEEEEEEhhh
Confidence 3899999999999999 588898888776632 3456777776543
No 40
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=35.32 E-value=4.3 Score=37.75 Aligned_cols=59 Identities=15% Similarity=0.224 Sum_probs=42.2
Q ss_pred HHHHhHHHHHHHHHHHHHhhhhhhhhhh---hhccCCCCCCCCceEEeeceeeeccCCchhhHHHHhh
Q psy7227 442 KLTRNLEFLTDKLQQTYRELEGEKQKTD---RLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFLSR 506 (635)
Q Consensus 442 ~L~~~~~~~~~~Le~~~~~L~~e~~~~~---~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~~r 506 (635)
.+.|++++++++|+.. ...+++..+. +++. ....|.++.+|.+.+||+.+++..|.+..
T Consensus 111 ~~~G~~Vn~AaRl~~~--a~~~~I~vs~~~~~~l~----~~~~~~~~~~g~~~lkG~~~~v~vy~~~~ 172 (189)
T 3mr7_A 111 DIFGDAVNVAARLEAI--SEPGAICVSDIVHQITQ----DRVSEPFTDLGLQKVKNITRPIRVWQWVP 172 (189)
T ss_dssp CEESHHHHHHHHHHHH--SCTTCEEEEHHHHHHHT----TTCCSCCEEEEEEEETTEEEEEEEEEECC
T ss_pred eEEChHHHHHHHHHhh--CCCCeEEECHHHHHhhc----cccCceEEECCCEEeCCcCCcEEEEEEcc
Confidence 4568899999999998 4445555533 3222 12459999999999999998887665443
No 41
>3mtk_A Diguanylate cyclase/phosphodiesterase; structural genomics, PSI-2, protein structure initiative; 2.24A {Caldicellulosiruptor saccharolyticus}
Probab=34.50 E-value=1.6e+02 Score=25.93 Aligned_cols=59 Identities=8% Similarity=0.064 Sum_probs=47.4
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeC
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSG 611 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G 611 (635)
...++++.||.+|..+..... ...-=++|.++-..+...+...+ ..-.+=||.++++.-
T Consensus 35 ~~~~l~~idid~f~~in~~~G----~~~gd~lL~~ia~~L~~~~~~~~----~~~R~~~d~F~il~~ 93 (178)
T 3mtk_A 35 IDTYLIFLEVRDLEKLNVTYG----YDLVDELIIHISKRIKDIAGEGN----KAFKIGFDRFAIICK 93 (178)
T ss_dssp TTEEEEEEEETTHHHHHHHHC----HHHHHHHHHHHHHHHHHHHCSSS----EEEEEETTEEEEEEE
T ss_pred CceEEEEEEhhHhhHHHHHhC----hHHHHHHHHHHHHHHHHhcCCCC----EEEEecCCEEEEEec
Confidence 468999999999999998887 77777778888888887776643 667788999988763
No 42
>3bre_A Probable two-component response regulator; protein-nucleotide complex, signaling protein; HET: C2E; 2.40A {Pseudomonas aeruginosa} PDB: 3i5a_A*
Probab=34.01 E-value=1.3e+02 Score=29.97 Aligned_cols=72 Identities=17% Similarity=0.136 Sum_probs=47.7
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHHH
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCIA 624 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~~ 624 (635)
...++++.||-+|..+..... ...-=.+|..+-..+...+...+ .+...+-||.++++.. ......+...+
T Consensus 201 ~~~~l~~idid~fk~ind~~G----~~~gD~~L~~va~~l~~~~~~~~---~~~~R~ggdeF~ill~--~~~~~~~~~~~ 271 (358)
T 3bre_A 201 SQLSLLMIDVDYFKSYNDTFG----HVAGDEALRQVAGAIREGCSRSS---DLAARYGGEEFAMVLP--GTSPGGARLLA 271 (358)
T ss_dssp CCEEEEEEEETTHHHHHHHHC----HHHHHHHHHHHHHHHHTTCCSTT---CEEEEEETTEEEEEEE--TCCHHHHHHHH
T ss_pred CcEEEEEEEchhhhHHHHhcC----hHHHHHHHHHHHHHHHHhcCCcC---cEEEEecCCeEEEEeC--CCCHHHHHHHH
Confidence 357999999999998877666 55545566666666666554434 5666788999887763 23344444444
Q ss_pred H
Q psy7227 625 R 625 (635)
Q Consensus 625 ~ 625 (635)
+
T Consensus 272 ~ 272 (358)
T 3bre_A 272 E 272 (358)
T ss_dssp H
T ss_pred H
Confidence 3
No 43
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=30.75 E-value=8.6 Score=36.29 Aligned_cols=59 Identities=17% Similarity=0.249 Sum_probs=41.5
Q ss_pred HHHHHhHHHHHHHHHHHHHhhhhhhhhhhhhccCCCCCCCCceEEeeceeeeccCCchhhHHHH
Q psy7227 441 YKLTRNLEFLTDKLQQTYRELEGEKQKTDRLLCSPDNEDPQFQFEYRGPVTMKGKSEPMEVWFL 504 (635)
Q Consensus 441 ~~L~~~~~~~~~~Le~~~~~L~~e~~~~~~~l~~~~~~~~~~~~~~rg~v~ikg~~~~l~~~l~ 504 (635)
|.+.|+++++++||+.. ...+++..+...... . ...|.++..|.+.+||+.+++..|.+
T Consensus 134 ~~v~G~~Vn~AaRl~~~--a~~~~I~vs~~~~~~--l-~~~~~~~~~~~~~lkG~~~~~~vy~v 192 (208)
T 2w01_A 134 YGVVGAQVNLTYRIESY--TTGGQIFISSTTLEA--A-GDRVHVNGNRTVQPKGVKDPVVIWDV 192 (208)
T ss_dssp EEEESHHHHHHHHHHHT--CCTTCEEEEHHHHHH--H-CTTEEEEEEEEECCTTCSSCEEEEEE
T ss_pred EEEECHHHHHHHHHHcc--CCCCeEEECHHHHHh--h-hcceEecccceEeecCCCCcEEEEEE
Confidence 34568899999999998 466666664421111 1 23699999999999999988765543
No 44
>3tvk_A DGC, diguanylate cyclase YDEH; putative zinc sensor, C-DI-GMP, transfe; HET: C2E; 1.80A {Escherichia coli}
Probab=28.60 E-value=1.9e+02 Score=26.18 Aligned_cols=68 Identities=15% Similarity=0.060 Sum_probs=46.2
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHH
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARC 622 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~ 622 (635)
..++|++.||-+|..+-.... -..-=++|.++-..+-..+...+ ..-.+=||-++++. |....+.+..
T Consensus 32 ~~~~l~~iDiD~FK~INd~~G----h~~GD~vL~~va~~L~~~~~~~~----~v~R~gGDEF~ill--~~~~~~~~~~ 99 (179)
T 3tvk_A 32 LNLYLMLLDIDRFKLVNDTYG----HLIGDVVLRTLATYLASWTRDYE----TVYRYGGEEFIIIV--KAANDEEACR 99 (179)
T ss_dssp SEEEEEEEEETTHHHHHHHHC----HHHHHHHHHHHHHHHHHTSCTTS----CEEECSSSEEEEEE--EESSHHHHHH
T ss_pred CCEEEEEEECCCCcHHHhccC----chhHHHHHHHHHHHhHhcCCccc----EEEEccCCEEEEEc--CCCCHHHHHH
Confidence 358999999999998877654 33323456677777777776654 56677899998876 3334444444
No 45
>3ezu_A Ggdef domain protein; multidomain protein of unknown function with GG domain, structural genomics, joint center for structural GE JCSG; 1.95A {Geobacter sulfurreducens}
Probab=25.54 E-value=2.4e+02 Score=28.33 Aligned_cols=70 Identities=11% Similarity=0.012 Sum_probs=47.5
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHHH
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCIA 624 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~~ 624 (635)
..+++++.||-+|..+..... ...-=.+|.++-..+-..+...+ ..-.+=||-++++. |....+.+...+
T Consensus 212 ~~~all~idId~fk~INd~~G----~~~gD~lL~~va~~L~~~~~~~d----~v~R~ggdeF~ill--~~~~~~~~~~~~ 281 (342)
T 3ezu_A 212 SNVGIMLIDLDYFKLVGDNYG----HQTGDRILQLVAETITSHLRRSD----VVGRYDGDEFVVYL--SPVEPASLRTVA 281 (342)
T ss_dssp CEEEEEEEEEEECCCCC---------CHHHHHHHHHHHHHHHTCCTTC----EEEECSSSEEEEEE--SSCCHHHHHHHH
T ss_pred CcEEEEEEECCcHHHHHHhhC----hHHHHHHHHHHHHHHHHHCCCCc----EEEEEcCCEEEEEE--CCCCHHHHHHHH
Confidence 468999999999999998877 66666677777777877776643 66678889998876 444444444433
No 46
>1w25_A Stalked-cell differentiation controlling protein; two-component system, ggdef domain, cyclic dinucleotide, cyclic-digmp; HET: C2E; 2.70A {Caulobacter vibrioides} SCOP: c.23.1.1 c.23.1.1 d.58.29.2 PDB: 2v0n_A* 2wb4_A*
Probab=25.43 E-value=3.4e+02 Score=27.99 Aligned_cols=69 Identities=16% Similarity=0.101 Sum_probs=49.6
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEeCCCCCChhHHHHH
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVSGLPVSCQDHARCI 623 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~G~p~~~~~ha~~~ 623 (635)
..+++++.||-+|..+-.... -..-=.+|..+-..+-..+...+ ..-.+=||-++++. |....+.+...
T Consensus 318 ~~~~l~~idid~fk~iNd~~G----h~~gD~~L~~~a~~l~~~~~~~d----~~~R~ggdeF~il~--~~~~~~~~~~~ 386 (459)
T 1w25_A 318 DPVSALLIDIDFFKKINDTFG----HDIGDEVLREFALRLASNVRAID----LPCRYGGEEFVVIM--PDTALADALRI 386 (459)
T ss_dssp CCCEEEEEEETTHHHHHHHSC----HHHHHHHHHHHHHHHHHTSCTTS----EEEECSSSEEEEEE--TTCCHHHHHHH
T ss_pred CcEEEEEEEchhhchhhhccC----hhhHHHHHHHHHHHHHHhCCCcC----EEEEEcCceEEEEe--CCCCHHHHHHH
Confidence 358999999999999988877 55555667777777777776544 66778899998886 33334444433
No 47
>3icl_A EAL/ggdef domain protein; structural genomics, PSI-2, protein structure initiative, northeast structural genomics, consortium, NESG; HET: MSE; 2.00A {Methylococcus capsulatus}
Probab=23.07 E-value=3.6e+02 Score=23.11 Aligned_cols=58 Identities=16% Similarity=0.130 Sum_probs=47.3
Q ss_pred ceeEEEEeeecCcchhcccccCCccHHHHHHHHHHHHHHHHHhcCCCCCCCEEEEEEeCcEEEEEe
Q psy7227 545 DCVTLLFSGIVGFSDYCATHTDSKGAMKIVTMLNQLYTTYDDLTDPKKNPNVYKVETVGDKYMAVS 610 (635)
Q Consensus 545 ~~vtvlF~Di~gFt~~~~~~~~~~~p~~vv~~Ln~~f~~fd~~~~~~~~~~~~k~ktiGD~ymav~ 610 (635)
...++++.||.+|..+.+... ...-=.+|.++-..+...+...+ ..-.+=||.++++.
T Consensus 29 ~~~~l~~i~id~f~~in~~~G----~~~gd~~L~~~a~~L~~~~~~~~----~~~R~~~d~F~ill 86 (171)
T 3icl_A 29 NPVVLLFLDVDNFKSINDSLG----HLVGDRLLRATAERIRTAVRDGD----TVARIGGDKFTILL 86 (171)
T ss_dssp SCCEEEEEEETTHHHHHHHHC----HHHHHHHHHHHHHHHHHHSCTTC----EEEEETTTEEEEEE
T ss_pred CcEEEEEEEChHhhHHHHHhC----hHHHHHHHHHHHHHHHHhcCCCC----EEEEecCCEEEEEe
Confidence 468999999999999998887 77777778888888888777643 66778889998776
No 48
>2xgv_A PSIV capsid N-terminal domain; retroviral capsid, viral protein; 2.00A {Microcebus murinus}
Probab=20.56 E-value=28 Score=30.71 Aligned_cols=22 Identities=14% Similarity=0.110 Sum_probs=19.7
Q ss_pred ecCcchhcccccCCccHHHHHHHHHH
Q psy7227 554 IVGFSDYCATHTDSKGAMKIVTMLNQ 579 (635)
Q Consensus 554 i~gFt~~~~~~~~~~~p~~vv~~Ln~ 579 (635)
|..|+.+|+.++ |.++-.|||.
T Consensus 37 ipmF~AlSeg~T----p~Dln~mLn~ 58 (142)
T 2xgv_A 37 ITYWGLISQDLS----SREQVQLLEV 58 (142)
T ss_dssp HHHHHHHTTTCC----HHHHHHHHHH
T ss_pred hHHHHHHhCCCC----hHHHHHHHHh
Confidence 568999999999 9999999885
No 49
>2cpg_A REPA protein, transcriptional repressor COPG; DNA-binding protein, plasmid, gene regulation; 1.60A {Streptococcus agalactiae} SCOP: a.43.1.3 PDB: 1b01_A* 1ea4_A*
Probab=20.41 E-value=1.5e+02 Score=19.77 Aligned_cols=34 Identities=6% Similarity=0.125 Sum_probs=26.8
Q ss_pred eeeCcHHHHHHHHHHHHhhCCCHHHHHHHhhHHH
Q psy7227 63 QIYEDEITYNLIGAAVGVLNIPANTILELFGKTF 96 (635)
Q Consensus 63 ~~Y~d~~~~~l~~~~~~~~g~~~~~ll~~fG~~~ 96 (635)
..+=|+++.+-+..+|+.+|.|..++++..=+.+
T Consensus 6 tv~l~~~l~~~Ld~~a~~~g~srS~~ir~ai~~~ 39 (45)
T 2cpg_A 6 TITLSESVLENLEKMAREMGLSKSAMISVALENY 39 (45)
T ss_dssp EEEEEHHHHHHHHHHHHHHTCCHHHHHHHHHHHH
T ss_pred EEecCHHHHHHHHHHHHHHCcCHHHHHHHHHHHH
Confidence 3445678888899999999999999988754444
Done!