Query psy7229
Match_columns 183
No_of_seqs 223 out of 606
Neff 6.0
Searched_HMMs 29240
Date Fri Aug 16 21:23:55 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7229.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/7229hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p08_A Signal transduction his 99.9 1.4E-27 4.8E-32 180.6 7.0 113 50-180 3-115 (115)
2 3uvj_A Guanylate cyclase solub 99.3 8.3E-14 2.8E-18 114.3 -4.9 80 26-105 10-96 (225)
3 1yk9_A Adenylate cyclase; beta 99.2 4.5E-12 1.5E-16 102.5 2.0 79 27-105 7-92 (204)
4 3et6_A Soluble guanylyl cyclas 99.2 2.1E-12 7.1E-17 102.5 -1.2 81 25-105 4-92 (190)
5 2wz1_A Guanylate cyclase solub 99.1 1.9E-12 6.5E-17 106.0 -2.0 80 26-105 8-101 (219)
6 1ab8_A Adenylyl cyclase; lyase 99.1 4.2E-12 1.4E-16 103.8 -0.8 79 27-105 11-114 (220)
7 1azs_A VC1; complex (lyase/hyd 99.1 2.4E-12 8.1E-17 106.1 -3.3 79 27-105 31-116 (220)
8 2w01_A Adenylate cyclase; guan 99.0 2.3E-11 7.7E-16 98.3 -2.3 78 28-105 12-96 (208)
9 1y10_A Hypothetical protein RV 98.9 4.5E-11 1.5E-15 107.0 -1.8 58 27-85 212-275 (407)
10 3r5g_A CYAB; adenylyl cyclase, 98.8 1.9E-10 6.5E-15 91.5 -2.7 76 29-104 8-92 (198)
11 1fx2_A Receptor-type adenylate 98.8 2.3E-10 8E-15 93.5 -2.5 61 25-86 7-73 (235)
12 1wc3_A Adenylate cyclase; solu 98.7 3.8E-10 1.3E-14 92.1 -3.0 77 28-104 25-110 (219)
13 1ybt_A Hydrolase, alpha/beta h 98.5 1.1E-09 3.9E-14 87.1 -5.6 60 26-85 13-78 (184)
14 3mr7_A Adenylate/guanylate cyc 98.2 1E-07 3.5E-12 75.3 -1.1 56 29-85 6-68 (189)
15 3p04_A Uncharacterized BCR; SE 25.5 26 0.00089 24.4 1.3 24 143-169 55-78 (87)
16 1n7z_A Baseplate structural pr 22.6 14 0.00047 31.8 -0.8 26 146-178 306-331 (334)
No 1
>2p08_A Signal transduction histidine kinase; PAS-like domain, homologous to domain in soluble guanylyl CY transferase; 2.00A {Nostoc punctiforme} PDB: 2p04_A
Probab=99.94 E-value=1.4e-27 Score=180.63 Aligned_cols=113 Identities=19% Similarity=0.333 Sum_probs=88.9
Q ss_pred cchhhhhhcccccCCcceEEEeehhhhHHHHhCCCCcCcchhhhhhchhccccccccccccchhhhhhhccceEEEEeCC
Q psy7229 50 PPSVFTTSSAMLPGNAHWDWVETVGDKYMAVSGLPVSCQDHARCIARLAHILDPVRPHLDLTFDNILAHINTVYVLKTKP 129 (183)
Q Consensus 50 p~~v~~~~~~~l~~~~dvyKVeTIGDaYm~v~Glp~~~~~ha~~ia~mAdmfelvRP~i~~tfe~Il~~~N~~F~L~~~~ 129 (183)
++..|..++.+.+-.-.-.+|.++|..+....+ .. ..++++.|+|++.||.+.++|++|+.++|+.|+|++++
T Consensus 3 ~~~~f~~lFPfHlvfd~~~~I~q~G~~L~k~~p--~~-----~~g~~~~d~F~l~RP~~~~tf~~i~~~~n~~f~L~~~~ 75 (115)
T 2p08_A 3 SPELLAKAFPFHFAFSRNREIVQTGEVLERISP--EP-----LVGKLIEQHFQINRPKILIDFDAISKQPRALFILEFLH 75 (115)
T ss_dssp CHHHHHHHCTTCEEECTTCBEEEECHHHHHHCS--SC-----CTTSBGGGTEEEEESSCCSCHHHHHTCTTSCEEEEETT
T ss_pred ChHHHHHhCCeEEEECCCCEEEEeccHHHHhCc--cc-----cCCCChhHeEEEeCCCcccCHHHHHhhcCCEEEEEEcC
Confidence 455566666664433334699999999999973 21 14788899999999999999999999999999999864
Q ss_pred CCCCCCccccccceEEeeeEEEEcCCCeEEEEcCCCcCChhHHhhcCcccc
Q psy7229 130 GIMQTGAEECYSTLRIKGQMLYVPESDLMIFLCYPSVVNLDDLTRRGLFIS 180 (183)
Q Consensus 130 ~~~~~~~~~~~~~l~LKGQM~~l~e~~~ilFLcSP~v~~L~eL~~~GLyLs 180 (183)
+.++|||||+|++||++|+|||||+++|||||.++|||||
T Consensus 76 -----------~~l~LKGqm~~~~e~~~ilfL~sP~v~~l~~l~~~GL~l~ 115 (115)
T 2p08_A 76 -----------NGMQLKGQMMYQPEEEVIFFLGSPWITDTTSLAPLGIKLK 115 (115)
T ss_dssp -----------TCCEEEEEEEEETTTTEEEEEEEECCCTTCCC--------
T ss_pred -----------CCcEEEEEEEEcCCCCEEEEEeCCCcCCHHHHHHcCcccC
Confidence 5699999999999999999999999999999999999997
No 2
>3uvj_A Guanylate cyclase soluble subunit alpha-3; nitric oxide, structural genomics, structural genomics conso SGC, CGMP biosynthesis; 2.08A {Homo sapiens}
Probab=99.25 E-value=8.3e-14 Score=114.35 Aligned_cols=80 Identities=25% Similarity=0.286 Sum_probs=69.0
Q ss_pred ccCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCCcCcchhhhhhchh-
Q psy7229 26 AIHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPVSCQDHARCIARLA- 98 (183)
Q Consensus 26 ~~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~~~~~ha~~ia~mA- 98 (183)
..+.++||+|+||+|||++++...|.+++..++ +.++.+|+.++++++||+||+++|+|....+|+...+.+|
T Consensus 10 ~~~~~vtvlF~Di~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~~g~v~k~~GD~~ma~fg~p~~~~~~a~~a~~~al 89 (225)
T 3uvj_A 10 KKFSNVTMLFSDIVGFTAICSQCSPLQVITMLNALYTRFDQQCGELDVYKVETIGDAYCVAGGLHKESDTHAVQIALMAL 89 (225)
T ss_dssp EEEEEEEEEEEEETTHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTCEEECCSTTCEEEEESSSSCCTTHHHHHHHHHH
T ss_pred cccceEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHhcCeEEEEeeCcEEEEEECCCCCchHHHHHHHHHHH
Confidence 345679999999999999999999999987554 3357889999999999999999999998888999888888
Q ss_pred ccccccc
Q psy7229 99 HILDPVR 105 (183)
Q Consensus 99 dmfelvR 105 (183)
++.+..+
T Consensus 90 ~~~~~~~ 96 (225)
T 3uvj_A 90 KMMELSD 96 (225)
T ss_dssp HHHHHHT
T ss_pred HHHHHHH
Confidence 8777655
No 3
>1yk9_A Adenylate cyclase; beta-alpha-beta sandwich, structural genomics, PSI, protein structure initiative; 2.70A {Mycobacterium tuberculosis}
Probab=99.18 E-value=4.5e-12 Score=102.51 Aligned_cols=79 Identities=23% Similarity=0.327 Sum_probs=67.8
Q ss_pred cCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCCcCcchhhhhhchh-c
Q psy7229 27 IHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPVSCQDHARCIARLA-H 99 (183)
Q Consensus 27 ~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~~~~~ha~~ia~mA-d 99 (183)
.+.+.||+|+||+|||++++...|.+++..++ +.++.+|+.++++++||+||+++|+|....+|+...+.+| +
T Consensus 7 ~~~~vtvlf~DI~gfT~l~~~~~~~~~~~~ln~~~~~~~~~i~~~gG~v~k~~GD~~ma~fg~p~~~~~~a~~A~~~Al~ 86 (204)
T 1yk9_A 7 KYDEASVLFADIVGFTERASSTAPADLVRFLDRLYSAFDELVDQHGLEKIEVSGDSYMVVSGVPRPRPDHTQALADFALD 86 (204)
T ss_dssp CCSCEEEEEEEESCSSCSSCCCCSSSTTTHHHHHHTTTTGGGTTSSCEECCCSSSCEEEESCCSSCCTTHHHHHHTHHHH
T ss_pred ccCcEEEEEEEccChHHHHhcCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEeCCeEEEEECCCCCChHHHHHHHHHHHH
Confidence 45679999999999999999999999886543 3467899999999999999999999988788998888888 7
Q ss_pred cccccc
Q psy7229 100 ILDPVR 105 (183)
Q Consensus 100 mfelvR 105 (183)
|.+..+
T Consensus 87 ~~~~~~ 92 (204)
T 1yk9_A 87 MTNVAA 92 (204)
T ss_dssp HHHHTT
T ss_pred HHHHHH
Confidence 776655
No 4
>3et6_A Soluble guanylyl cyclase beta; guanylate cyclase, dimethylarsenic, lyase, membrane, transmembrane; 2.55A {Chlamydomonas reinhardtii} PDB: 3et6_B
Probab=99.15 E-value=2.1e-12 Score=102.46 Aligned_cols=81 Identities=27% Similarity=0.402 Sum_probs=68.7
Q ss_pred CccCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCc-ceEEEeehhhhHHHHhCCCCcCcchhhhhhch
Q psy7229 25 NAIHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNA-HWDWVETVGDKYMAVSGLPVSCQDHARCIARL 97 (183)
Q Consensus 25 ~~~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~-dvyKVeTIGDaYm~v~Glp~~~~~ha~~ia~m 97 (183)
...+..+||+|+||+|||++++...|.+++..++ +.++.+| +.++|+++||+||+++|+|....+|+.....+
T Consensus 4 ~~e~~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~g~~~vk~~GD~~~a~fg~~~~~~~~~~~a~~~ 83 (190)
T 3et6_A 4 AQEHPEATVLFSDIVGFTEIASRSSPLEVXSLLDELYQRFDAAIEEYPQLYKVETIGDAYMVVCNVTVPCDDHADVLLEF 83 (190)
T ss_dssp CEEEEEEEEEEEEETTHHHHTTTSCHHHHHHHHHHHHHHHHHHGGGCTTEEEEECTTSCEEEEESSSSCCSTHHHHHHHH
T ss_pred ccccceEEEEEeEecChhHhHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEeCCEEEEEECCCCCchhHHHHHHHH
Confidence 3456779999999999999999999999886543 3457888 99999999999999999999878899888888
Q ss_pred h-ccccccc
Q psy7229 98 A-HILDPVR 105 (183)
Q Consensus 98 A-dmfelvR 105 (183)
| ++.+..+
T Consensus 84 al~~~~~~~ 92 (190)
T 3et6_A 84 ALRMHEEAS 92 (190)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 8 7776655
No 5
>2wz1_A Guanylate cyclase soluble subunit beta-1; lyase, GUCY1, metal-binding, CGMP biosynthesis, nucleotide-B cyclase, GUCY1B3, GTP-binding; 1.63A {Homo sapiens} PDB: 3uvj_B
Probab=99.14 E-value=1.9e-12 Score=106.02 Aligned_cols=80 Identities=30% Similarity=0.408 Sum_probs=67.3
Q ss_pred ccCCCCCEEEeeecCccceecccC----cchhhhhhc------ccccC---CcceEEEeehhhhHHHHhCCCCcCcchhh
Q psy7229 26 AIHPTPPVVITTIFHTTTIHTTVF----PPSVFTTSS------AMLPG---NAHWDWVETVGDKYMAVSGLPVSCQDHAR 92 (183)
Q Consensus 26 ~~~~~~~v~f~di~~~t~~~~~~~----p~~v~~~~~------~~l~~---~~dvyKVeTIGDaYm~v~Glp~~~~~ha~ 92 (183)
..+..+||+|+||+|||++++... |.+++..++ +.++. .|+++|++++||+||+++|.|....+|+.
T Consensus 8 ~~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~~~~~Ln~~~~~~~~~i~~~~~~~g~~~k~~GD~~ma~fg~p~~~~~~a~ 87 (219)
T 2wz1_A 8 KRYDNVTILFSGIVGFNAFCSKHASGEGAMKIVNLLNDLYTRFDTLTDSRKNPFVYKVETVGDKYMTVSGLPEPCIHHAR 87 (219)
T ss_dssp EEEEEEEEEEEEETTHHHHHHHSCCC--HHHHHHHHHHHHHHHHHHHCTTTCTTCEEECCCTTCEEEEESSSSCCTTHHH
T ss_pred cceeeEEEEEEEccCcHHHHHhCCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCEEEEeecCCEEEEEECCCCCChhHHH
Confidence 345679999999999999999998 999886543 23456 78999999999999999999998888998
Q ss_pred hhhchh-ccccccc
Q psy7229 93 CIARLA-HILDPVR 105 (183)
Q Consensus 93 ~ia~mA-dmfelvR 105 (183)
..+..| +|.+..+
T Consensus 88 ~A~~~Al~~~~~~~ 101 (219)
T 2wz1_A 88 SICHLALDMMEIAG 101 (219)
T ss_dssp HHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHH
Confidence 888888 7776655
No 6
>1ab8_A Adenylyl cyclase; lyase, complex (transferase-inhibitor); HET: FOK; 2.20A {Rattus norvegicus} SCOP: d.58.29.1 PDB: 1azs_B* 1cjk_B* 1cjt_B* 1cju_B* 1cjv_B* 1cs4_B* 1tl7_B* 1u0h_B* 2gvd_B* 2gvz_B* 3c14_B* 3c15_B* 3c16_B* 3e8a_B* 3g82_B* 3maa_B* 1cul_B*
Probab=99.12 E-value=4.2e-12 Score=103.78 Aligned_cols=79 Identities=16% Similarity=0.153 Sum_probs=61.6
Q ss_pred cCCCCCEEEeeecCccceecccC----cchhhhhhc------ccccCCc---ceEEEeehhhhHHHHhCCCC--------
Q psy7229 27 IHPTPPVVITTIFHTTTIHTTVF----PPSVFTTSS------AMLPGNA---HWDWVETVGDKYMAVSGLPV-------- 85 (183)
Q Consensus 27 ~~~~~~v~f~di~~~t~~~~~~~----p~~v~~~~~------~~l~~~~---dvyKVeTIGDaYm~v~Glp~-------- 85 (183)
.+..+||+|+||+|||++++... |.+++..++ +.++.+| +++||+++||+||+++|+|.
T Consensus 11 ~~~~vtvlF~DI~gfT~l~~~l~~~~~p~~~~~~Ln~~~~~~~~~i~~~~~~g~~~ik~iGD~~ma~fg~p~~~~~~~~~ 90 (220)
T 1ab8_A 11 SYDCVCVMFASIPDFKEFYTESDVNKEGLECLRLLNEIIADFDDLLSKPKFSGVEKIKTIGSTYMAATGLSAIPSQEHAQ 90 (220)
T ss_dssp EEEEEEEEEEECTTHHHHCCCSTTTTTTHHHHHHHHHHHHHHHGGGGSGGGTTEEEEEEETTEEEEEECCCCSCCC----
T ss_pred ccCcEEEEEEEccchHHHHHhcCCCCCHHHHHHHHHHHHHHHHHHHHhhccCCeEEEEEeCceEEEEECCCccccccccc
Confidence 45678999999999999998864 678876433 3456665 89999999999999999987
Q ss_pred ---cCcchhhhhhchh-ccccccc
Q psy7229 86 ---SCQDHARCIARLA-HILDPVR 105 (183)
Q Consensus 86 ---~~~~ha~~ia~mA-dmfelvR 105 (183)
...+|+...+..| +|.+..+
T Consensus 91 ~~~~~~~~a~~a~~~Al~~~~~l~ 114 (220)
T 1ab8_A 91 EPERQYMHIGTMVEFAYALVGKLD 114 (220)
T ss_dssp ----CCHHHHHHHHHHHHHHHHHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHH
Confidence 2446887887877 7765543
No 7
>1azs_A VC1; complex (lyase/hydrolase), hydrolase, signal transducing protein, cyclase, effector enzyme; HET: GSP FKP; 2.30A {Canis lupus familiaris} SCOP: d.58.29.1 PDB: 1cs4_A* 1u0h_A* 2gvd_A* 2gvz_A* 3c14_A* 3c15_A* 3c16_A* 3e8a_A* 3g82_A* 3maa_A* 1cul_A* 1cjk_A* 1cju_A* 1cjv_A* 1cjt_A* 1tl7_A*
Probab=99.10 E-value=2.4e-12 Score=106.06 Aligned_cols=79 Identities=23% Similarity=0.418 Sum_probs=67.4
Q ss_pred cCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCCcCcchhhhhhchh-c
Q psy7229 27 IHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPVSCQDHARCIARLA-H 99 (183)
Q Consensus 27 ~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~~~~~ha~~ia~mA-d 99 (183)
.+..+||+|+||+|||++++...|.+++..++ +.++.+|+.++++++||+||+++|+|.+..+|+...+..| +
T Consensus 31 ~~~~vtvlF~DI~gfT~l~e~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~~a~~Av~~Al~ 110 (220)
T 1azs_A 31 KHDNVSILFADIEGFTSLASQCTAQELVMTLNELFARFDKLAAENHCLRIKILGDCYYCVSGLPEARADHAHCCVEMGMD 110 (220)
T ss_dssp EEEEEEEEEEEEETHHHHHHHSCHHHHHHHHHHHHHHHHHHHHHHTEEEEEEETTEEEEEESCSSCCSTHHHHHHHHHHH
T ss_pred ccccEEEEEEEccChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCcEEEEEeCCeEEEEECCCCCChHHHHHHHHHHHH
Confidence 34678999999999999999999999987544 3357889999999999999999999998788998888888 7
Q ss_pred cccccc
Q psy7229 100 ILDPVR 105 (183)
Q Consensus 100 mfelvR 105 (183)
|.+..+
T Consensus 111 m~~~l~ 116 (220)
T 1azs_A 111 MIEAIS 116 (220)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 766544
No 8
>2w01_A Adenylate cyclase; guanylyl cyclase, class III nucleotidyl cyclase, lyase; 2.31A {Synechocystis SP}
Probab=98.97 E-value=2.3e-11 Score=98.27 Aligned_cols=78 Identities=18% Similarity=0.139 Sum_probs=65.2
Q ss_pred CCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCCcCcchhhhhhchh-cc
Q psy7229 28 HPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPVSCQDHARCIARLA-HI 100 (183)
Q Consensus 28 ~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~~~~~ha~~ia~mA-dm 100 (183)
+..+||+|+||+|||++++...|.+++..++ +.++.+|+.++++++||+||+++|.|....+|+......| +|
T Consensus 12 ~~~vtvlf~Di~gfT~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~~a~~Av~~Al~~ 91 (208)
T 2w01_A 12 RRPITILTSDLRGFTSTSEGLNPEEVVKVLNIYFGKMADVITHHGGTIDEFMGDGILVLFGAPTSQQDDALRAVACGVEM 91 (208)
T ss_dssp EEEEEEEEEECTTHHHHGGGSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCTTHHHHHHHHHHHH
T ss_pred EEEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCEEEEEECCCCCChhHHHHHHHHHHHH
Confidence 4568999999999999999999999886544 2356889999999999999999999988778888777777 76
Q ss_pred ccccc
Q psy7229 101 LDPVR 105 (183)
Q Consensus 101 felvR 105 (183)
.+..+
T Consensus 92 ~~~l~ 96 (208)
T 2w01_A 92 QLALR 96 (208)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 9
>1y10_A Hypothetical protein RV1264/MT1302; adenylyl cyclase fold, lyase; HET: 1PE; 2.30A {Mycobacterium tuberculosis} PDB: 1y11_A*
Probab=98.94 E-value=4.5e-11 Score=107.03 Aligned_cols=58 Identities=17% Similarity=0.123 Sum_probs=49.6
Q ss_pred cCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCC
Q psy7229 27 IHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPV 85 (183)
Q Consensus 27 ~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~ 85 (183)
.+.++||+|+||+|||++++...|.+++..++ +.++ .|+.|||++|||+||+++|.|.
T Consensus 212 ~~~~vTVlFaDIvgFT~ls~~~~p~evv~lLn~~~~~~~~i~-~~~g~~iKtiGDa~mavfg~p~ 275 (407)
T 1y10_A 212 GARQVTVAFADLVGFTQLGEVVSAEELGHLAGRLAGLARDLT-APPVWFIKTIGDAVMLVCPDPA 275 (407)
T ss_dssp TCEEEEEEEEEECSBCTTSCBCCHHHHHHHHHHHHHHHHHHC-CTTCEEEEEETTEEEEEESSHH
T ss_pred ceeeEEEEEEEccCchHHHhhCCHHHHHHHHHHHHHHHHHHH-HcCcEEEEEecceEEEEECCHH
Confidence 35678999999999999999999999987543 2333 4899999999999999999886
No 10
>3r5g_A CYAB; adenylyl cyclase, lyase; 1.50A {Pseudomonas aeruginosa} SCOP: d.58.29.0
Probab=98.80 E-value=1.9e-10 Score=91.46 Aligned_cols=76 Identities=13% Similarity=0.064 Sum_probs=61.0
Q ss_pred CCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCCcC--cchhhhhhchh-c
Q psy7229 29 PTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPVSC--QDHARCIARLA-H 99 (183)
Q Consensus 29 ~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~~~--~~ha~~ia~mA-d 99 (183)
..+||+|+||+|||++++...|.++...++ +.++.+|+.++++++||+||+++|.|... .+|+.....+| +
T Consensus 8 ~~vtvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~~a~fg~p~~~~~~~~a~~a~~~al~ 87 (198)
T 3r5g_A 8 KKLTVFFSDIRGFTELSEELEAEALTDLLNNYLNEMSKIALKYGGTIDKFVGDCVMVFFGDPSTQGAKKDAVAAVSMGIA 87 (198)
T ss_dssp EEEEEEEEEEETHHHHHTTSCHHHHHHHHHHHHHHHHHHHHHHTCEEEEEETTEEEEEESSSSCSCHHHHHHHHHHHHHH
T ss_pred EEEEEEEEEccccchhhhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeeeCCEEEEEECCCcccccHHHHHHHHHHHHH
Confidence 458999999999999999999999886543 23568899999999999999999999865 35666666666 6
Q ss_pred ccccc
Q psy7229 100 ILDPV 104 (183)
Q Consensus 100 mfelv 104 (183)
+.+..
T Consensus 88 i~~~~ 92 (198)
T 3r5g_A 88 MRKHM 92 (198)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 65443
No 11
>1fx2_A Receptor-type adenylate cyclase gresag 4.1; CAMP, trypanosomes, adenylyl cyclases, monomer-dimer, catalysis, lyase; 1.46A {Trypanosoma brucei} SCOP: d.58.29.1 PDB: 1fx4_A
Probab=98.79 E-value=2.3e-10 Score=93.51 Aligned_cols=61 Identities=23% Similarity=0.264 Sum_probs=50.7
Q ss_pred CccCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCCc
Q psy7229 25 NAIHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPVS 86 (183)
Q Consensus 25 ~~~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~~ 86 (183)
..-+..+||+|+||+|||++++.. |.++...++ +.++.+|+.|+++++||+||+++|.|..
T Consensus 7 ~~~~~~vtvlF~DI~gfT~l~~~~-~~~~~~~l~~~~~~~~~~i~~~~G~v~k~~GD~~ma~fg~p~~ 73 (235)
T 1fx2_A 7 KEPTDPVTLIFTDIESSTALWAAH-PDLMPDAVAAHHRMVRSLIGRYKCYEVKTVGDSFMIASKSPFA 73 (235)
T ss_dssp CCTTSCEEEEEEEETTHHHHHHHC-TTTHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESCHHH
T ss_pred CCCCCcEEEEEEeccChHHHHHHC-HHHHHHHHHHHHHHHHHHHHHcCCEEEEEcCCeEEEEeCCHHH
Confidence 345677999999999999999985 887776433 3467899999999999999999999864
No 12
>1wc3_A Adenylate cyclase; soluble adenylyl cyclase, CAMP signaling, lyase; HET: APC; 1.9A {Spirulina platensis} SCOP: d.58.29.1 PDB: 1wc0_A* 1wc4_A* 1wc5_A* 2bw7_A* 1wc1_A* 1wc6_A*
Probab=98.73 E-value=3.8e-10 Score=92.06 Aligned_cols=77 Identities=17% Similarity=0.135 Sum_probs=61.6
Q ss_pred CCCCCEEEeeecCccceecccCcchhhhhhcc------cccCCcceEEEeehhhhHHHHhCCCCcC--cchhhhhhchh-
Q psy7229 28 HPTPPVVITTIFHTTTIHTTVFPPSVFTTSSA------MLPGNAHWDWVETVGDKYMAVSGLPVSC--QDHARCIARLA- 98 (183)
Q Consensus 28 ~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~~------~l~~~~dvyKVeTIGDaYm~v~Glp~~~--~~ha~~ia~mA- 98 (183)
...+||+|+||+|||++++...|.+++..+++ .++.+|+.++++++||+||+++|.|... .+|+......|
T Consensus 25 ~~~vtvlF~DI~gfT~l~~~~~~~~~~~~Ln~~~~~~~~~i~~~gG~v~k~iGD~~ma~fg~p~~~~~~~~a~~Av~~Al 104 (219)
T 1wc3_A 25 PRLITILFSDIVGFTRMSNALQSQGVAELLNEYLGEMTRAVFENQGTVDKFVGDAIMALYGAPEEMSPSEQVRRAIATAR 104 (219)
T ss_dssp EEEEEEEEEEEESHHHHHHTSCHHHHHHHHHHHHHHHHHHHHHTTCEEEEEETTEEEEEESSSSCCCHHHHHHHHHHHHH
T ss_pred eeEEEEEEEEecChHHHHhhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEEEEcCeEEEEECCCCCCCChHHHHHHHHHHH
Confidence 35689999999999999999999998865442 3467899899999999999999999753 25776666766
Q ss_pred cccccc
Q psy7229 99 HILDPV 104 (183)
Q Consensus 99 dmfelv 104 (183)
+|.+..
T Consensus 105 ~~~~~l 110 (219)
T 1wc3_A 105 QMLVAL 110 (219)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 665544
No 13
>1ybt_A Hydrolase, alpha/beta hydrolase fold family; cyclase homology domain, CHD, RV1900C; 2.31A {Mycobacterium tuberculosis} PDB: 1ybu_A*
Probab=98.53 E-value=1.1e-09 Score=87.10 Aligned_cols=60 Identities=17% Similarity=0.025 Sum_probs=51.1
Q ss_pred ccCCCCCEEEeeecCccceecccCcchhhhhhc------ccccCCcceEEEeehhhhHHHHhCCCC
Q psy7229 26 AIHPTPPVVITTIFHTTTIHTTVFPPSVFTTSS------AMLPGNAHWDWVETVGDKYMAVSGLPV 85 (183)
Q Consensus 26 ~~~~~~~v~f~di~~~t~~~~~~~p~~v~~~~~------~~l~~~~dvyKVeTIGDaYm~v~Glp~ 85 (183)
..+...||+|+||+|||++++...|.++...++ +.++.+|+.++++++||+||+++|.|.
T Consensus 13 ~~~~~~tvlf~Di~gft~l~~~~~~~~~~~~l~~~~~~~~~~i~~~gG~v~k~~GD~~ma~f~~p~ 78 (184)
T 1ybt_A 13 AERMLATIMFTDIVGSTQHAAALGDDRWRDLLDNHDTIVCHEIQRFGGREVNTAGDGFVATFTSPS 78 (184)
T ss_dssp CEEEEEEEEEEEETTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCEECCCSSSSEEEEESCHH
T ss_pred CceEEEEEEEEECcCcHHHHHhCCHHHHHHHHHHHHHHHHHHHHHcCCEEEeEeCCEEEEEeCCHH
Confidence 344678999999999999999999988886543 335688999999999999999999874
No 14
>3mr7_A Adenylate/guanylate cyclase/hydrolase, alpha/beta family; alpha-beta fold, structural genomics, PSI-2, protein structu initiative; 2.60A {Ruegeria pomeroyi}
Probab=98.22 E-value=1e-07 Score=75.35 Aligned_cols=56 Identities=11% Similarity=-0.011 Sum_probs=45.2
Q ss_pred CCCCEEEeeecCccceecccCcchhhhhh-------cccccCCcceEEEeehhhhHHHHhCCCC
Q psy7229 29 PTPPVVITTIFHTTTIHTTVFPPSVFTTS-------SAMLPGNAHWDWVETVGDKYMAVSGLPV 85 (183)
Q Consensus 29 ~~~~v~f~di~~~t~~~~~~~p~~v~~~~-------~~~l~~~~dvyKVeTIGDaYm~v~Glp~ 85 (183)
..+||+|+||+|||++++...|.++ ..+ .+.++.+|+.++++++||+||+++|.|.
T Consensus 6 r~vtvlf~Di~gft~l~~~~~~~~~-~~l~~~~~~~~~~~i~~~~G~v~k~~GD~~~a~f~~~~ 68 (189)
T 3mr7_A 6 RLCAILAADMAGYSRLMERNETDVL-NRQKLYRRELIDPAIAQAGGQIVKTTGDGMLARFDTAQ 68 (189)
T ss_dssp EEEEEEEEEECCCCGGGCCCCHHHH-HHHHHHHHHTHHHHHHHTTCEEEEEETTEEEEEESSHH
T ss_pred EEEEEEEEEchhhHHHHhhCCHHHH-HHHHHHHHHHHHHHHHHcCCEEEEEeCCEEEEEeCCHH
Confidence 4589999999999999998766554 322 2335788999999999999999999653
No 15
>3p04_A Uncharacterized BCR; SEPF homolog, DUF552, PSI-biology, NESG, structural genomics structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=25.53 E-value=26 Score=24.40 Aligned_cols=24 Identities=21% Similarity=0.479 Sum_probs=18.6
Q ss_pred eEEeeeEEEEcCCCeEEEEcCCCcCCh
Q psy7229 143 LRIKGQMLYVPESDLMIFLCYPSVVNL 169 (183)
Q Consensus 143 l~LKGQM~~l~e~~~ilFLcSP~v~~L 169 (183)
.-|.|++..+.+. +|||+|.--++
T Consensus 55 yal~G~i~kI~~~---IFl~~P~~V~i 78 (87)
T 3p04_A 55 FALHGKMQKIDSV---TFAVVPELSNI 78 (87)
T ss_dssp HHTTCEEEEEETT---EEEEECCCCCC
T ss_pred EEeccEEEEEcCC---EEEEECCCeEE
Confidence 5578999999866 79999975443
No 16
>1n7z_A Baseplate structural protein GP8; bacteriophage T4, dimer, beta sandwich, viral protein; 2.00A {Enterobacteria phage T4} SCOP: b.127.1.1 PDB: 1n80_A 1n8b_A 1pdm_A 1tja_A
Probab=22.61 E-value=14 Score=31.82 Aligned_cols=26 Identities=19% Similarity=0.575 Sum_probs=20.3
Q ss_pred eeeEEEEcCCCeEEEEcCCCcCChhHHhhcCcc
Q psy7229 146 KGQMLYVPESDLMIFLCYPSVVNLDDLTRRGLF 178 (183)
Q Consensus 146 KGQM~~l~e~~~ilFLcSP~v~~L~eL~~~GLy 178 (183)
.|||+||+... |+++++++-++..+.
T Consensus 306 sgemiymenr~-------pi~rs~dqtee~nii 331 (334)
T 1n7z_A 306 SGEMIYMENRP-------PIIMAMDQTEEINIL 331 (334)
T ss_dssp CSEEEEEEEEE-------EECCCTTCEEEECCE
T ss_pred CccEEEeeCCC-------CcccccccceeEEEE
Confidence 69999999985 788888876665543
Done!