BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy7233
(383 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2CFS|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
pdb|2CFT|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase With Its Substrate
Length = 298
Score = 186 bits (471), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 159/306 (51%), Gaps = 21/306 (6%)
Query: 77 LINLSELSGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNN 136
+ L G +D L VL DCDGVLW + GA +++ L GK +V+NN
Sbjct: 3 MARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 62
Query: 137 STKTREQLIVKLKHLGFNA-EPNEIIGTAYLAAQYLKKHL----DPKKKAYIVGSSGIAD 191
S + R +L ++ LGF ++ +A AA+ L++ L D +++G G+
Sbjct: 63 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 122
Query: 192 ELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLT 251
EL AG+ + G D P V AV+VG+D H SF KL +A +L
Sbjct: 123 ELRAAGLR---------LAGDPSAGD----GAAPRVRAVLVGYDEHFSFAKLREACAHLR 169
Query: 252 NPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYN 311
+P L VAT+ D P+ PGTGS+ AAV+T + R+ +V+GKPS + + E ++
Sbjct: 170 DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYMFECITENFS 229
Query: 312 LNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL 371
++P RTLM+GDR TDI G+ G T+L LTG + +E+A A+ + + V YY+
Sbjct: 230 IDPARTLMVGDRLETDILFGHRCGMTTVLTLTGVSRLEEAQAYLAAGQHDL---VPHYYV 286
Query: 372 SSLGDM 377
S+ D+
Sbjct: 287 ESIADL 292
>pdb|2OYC|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
pdb|2P27|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Mg2+ At 1.9 A Resolution
pdb|2P69|A Chain A, Crystal Structure Of Human Pyridoxal Phosphate Phosphatase
With Plp
Length = 306
Score = 182 bits (461), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/306 (33%), Positives = 157/306 (51%), Gaps = 21/306 (6%)
Query: 77 LINLSELSGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNN 136
L L G +D L VL DCDGVLW + GA +++ L GK +V+NN
Sbjct: 3 LARCERLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNN 62
Query: 137 STKTREQLIVKLKHLGFNA-EPNEIIGTAYLAAQYLKKHL----DPKKKAYIVGSSGIAD 191
S + R +L ++ LGF ++ +A AA+ L++ L D +++G G+
Sbjct: 63 SRRARPELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRA 122
Query: 192 ELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLT 251
EL AG+ + G D P V AV+VG+D H SF KL +A +L
Sbjct: 123 ELRAAGLR---------LAGDPSAGD----GAAPRVRAVLVGYDEHFSFAKLREACAHLR 169
Query: 252 NPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYN 311
+P L VAT+ D P+ PGTGS+ AAV+T + R+ +V+GKPS + E ++
Sbjct: 170 DPECLLVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYXFECITENFS 229
Query: 312 LNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL 371
++P RTL +GDR TDI G+ G T+L LTG + +E+A A+ + + V YY+
Sbjct: 230 IDPARTLXVGDRLETDILFGHRCGXTTVLTLTGVSRLEEAQAYLAAGQHDL---VPHYYV 286
Query: 372 SSLGDM 377
S+ D+
Sbjct: 287 ESIADL 292
>pdb|2CFR|A Chain A, Crystal Structure Of Human Pyridoxal 5'-Phosphate
Phosphatase
Length = 298
Score = 181 bits (458), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/301 (34%), Positives = 156/301 (51%), Gaps = 21/301 (6%)
Query: 82 ELSGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTR 141
L G +D L VL DCDGVLW + GA +++ L GK +V+NNS + R
Sbjct: 8 RLRGAALRDVLGRAQGVLFDCDGVLWNGERAVPGAPELLERLARAGKAALFVSNNSRRAR 67
Query: 142 EQLIVKLKHLGFNA-EPNEIIGTAYLAAQYLKKHL----DPKKKAYIVGSSGIADELNLA 196
+L ++ LGF ++ +A AA+ L++ L D +++G G+ EL A
Sbjct: 68 PELALRFARLGFGGLRAEQLFSSALCAARLLRQRLPGPPDAPGAVFVLGGEGLRAELRAA 127
Query: 197 GIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTL 256
G+ + G D P V AV+VG+D H SF KL +A +L +P L
Sbjct: 128 GLR---------LAGDPSAGD----GAAPRVRAVLVGYDEHFSFAKLREACAHLRDPECL 174
Query: 257 FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316
VAT+ D P+ PGTGS+ AAV+T + R+ +V+GKPS + E ++++P R
Sbjct: 175 LVATDRDPWHPLSDGSRTPGTGSLAAAVETASGRQALVVGKPSPYXFECITENFSIDPAR 234
Query: 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGD 376
TL +GDR TDI G+ G T+L LTG + +E+A A+ + + V YY+ S+ D
Sbjct: 235 TLXVGDRLETDILFGHRCGXTTVLTLTGVSRLEEAQAYLAAGQHDL---VPHYYVESIAD 291
Query: 377 M 377
+
Sbjct: 292 L 292
>pdb|1ZJJ|A Chain A, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
pdb|1ZJJ|B Chain B, Crystal Structure Of Hypothetical Protein Ph1952 From
Pyrococcus Horikoshii Ot3
Length = 263
Score = 126 bits (317), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 89/287 (31%), Positives = 142/287 (49%), Gaps = 27/287 (9%)
Query: 97 TVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAE 156
++ D DGVL+ N I G +++ LK G ++TNNSTKT E KL +G +
Sbjct: 3 AIIFDMDGVLYRGNRAIPGVRELIEFLKERGIPFAFLTNNSTKTPEMYREKLLKMGIDVS 62
Query: 157 PNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKT 216
+ II + Y+ KHLDP K +++G G+ E+ G +G+ +
Sbjct: 63 SSIIITSGLATRLYMSKHLDP-GKIFVIGGEGLVKEMQALG---WGI----------VTL 108
Query: 217 DHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPG 276
D + V VVVG D +++ KL A + N T F+ TN D + P G PG
Sbjct: 109 DEARQGSWKEVKHVVVGLDPDLTYEKLKYATLAIRNGAT-FIGTNPDATLP-GEEGIYPG 166
Query: 277 TGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGF 336
GS++AA+K EP++IGKP++ + Y + + E M+GDR +TDI G
Sbjct: 167 AGSIIAALKVATNVEPIIIGKPNEPM--YEVVREMFPGEELWMVGDRLDTDIAFAKKFGM 224
Query: 337 QTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLSS 383
+ ++VLTG +++E + EYK D L S+ +++ +L +
Sbjct: 225 KAIMVLTGVSSLEDI------KKSEYKP---DLVLPSVYELIDYLKT 262
>pdb|3QGM|A Chain A, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|B Chain B, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|C Chain C, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
pdb|3QGM|D Chain D, P-Nitrophenyl Phosphatase From Archaeoglobus Fulgidus
Length = 268
Score = 116 bits (291), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 90/290 (31%), Positives = 141/290 (48%), Gaps = 38/290 (13%)
Query: 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPN 158
+ D DGV+ I + + LK LGKKI +V+NNST++R L+ +L+ G +
Sbjct: 12 IIDIDGVIGKSVTPIPEGVEGVKKLKELGKKIIFVSNNSTRSRRILLERLRSFGLEVGED 71
Query: 159 EIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDH 218
EI+ Y A+++ + P K + G G+ +EL LAG+E D+
Sbjct: 72 EILVATYATARFIARE-KPNAKVFTTGEEGLIEELRLAGLE---------------IVDY 115
Query: 219 EKLNLDPHVGAVVVGFDSHISFPKLMKA--ACYLTNPNTLFVATNTDESFPM--GPHVTV 274
++ +VVG + I+F KA AC ++ATN D FP GP +
Sbjct: 116 DEAEY------LVVGSNRKINFELXTKALRACLR---GIRYIATNPDRIFPAEDGP---I 163
Query: 275 PGTGSMVAAVKTGAQREP-VVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYN 333
PGTG ++ A+ REP VV+GKPS++I ++ L+ + ++GD+ + D+ G
Sbjct: 164 PGTGXIIGALYWXTGREPDVVVGKPSEVIXREALDILGLDAKDVAVVGDQIDVDVAAGKA 223
Query: 334 NGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLSS 383
G +T+LVLTG TT E + + E DY +SL D + L
Sbjct: 224 IGAETVLVLTGVTTRE-----NLDQXIERHGLKPDYVFNSLKDXVEALEG 268
>pdb|1VJR|A Chain A, Crystal Structure Of 4-nitrophenylphosphatase (tm1742)
From Thermotoga Maritima At 2.40 A Resolution
Length = 271
Score = 110 bits (276), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/289 (26%), Positives = 140/289 (48%), Gaps = 39/289 (13%)
Query: 92 LNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHL 151
L+ + + D DG +L++ L+ G+ + + +LK K+ + TNNS+ + + KL++
Sbjct: 14 LDKIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNX 73
Query: 152 GFNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPG 211
G + + ++ + + A++ K + + +++G+ + G PD
Sbjct: 74 GVDVPDDAVVTSGEITAEHXLKRFG-RCRIFLLGTPQLKKVFEAYGHVIDEENPDF---- 128
Query: 212 RDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPM--G 269
VV+GFD +++ +L K AC L ++AT+ D + P G
Sbjct: 129 ------------------VVLGFDKTLTYERL-KKACILLRKGKFYIATHPDINCPSKEG 169
Query: 270 PHVTVPGTGSMVAAVKTGAQREP-VVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDI 328
P VP GS+ AA++ R+P ++ GKP+ L+ + EK+ + ER +GDR TD+
Sbjct: 170 P---VPDAGSIXAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDV 226
Query: 329 RLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDM 377
+LG N G ++LVLTG+TT ED E D+ +LG++
Sbjct: 227 KLGKNAGIVSILVLTGETT---------PEDLERAETKPDFVFKNLGEL 266
>pdb|1YV9|A Chain A, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
pdb|1YV9|B Chain B, Crystal Structure Of A Had-Like Phosphatase From
Enterococcus Faecalis V583
Length = 264
Score = 110 bits (275), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 119/248 (47%), Gaps = 24/248 (9%)
Query: 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPN 158
L D DG ++L E I + + L+ +VTNN+TK+ E + +L + P
Sbjct: 9 LIDLDGTIYLGKEPIPAGKRFVERLQEKDLPFLFVTNNTTKSPETVAQRLANEFDIHVPA 68
Query: 159 EIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDH 218
++ TA LA K + KK +++G +G+ D + AG E PD
Sbjct: 69 SLVYTATLATIDYMKEANRGKKVFVIGEAGLIDLILEAGFEWDETNPDY----------- 117
Query: 219 EKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTG 278
VVVG D+ +S+ K++ A + LF+ TN D++ P + +PG G
Sbjct: 118 -----------VVVGLDTELSYEKVVLATLAIQK-GALFIGTNPDKNIPTERGL-LPGAG 164
Query: 279 SMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQT 338
S+V V+T Q +PV IGKP +I I + E+ +M+GD TDI+ G NG +
Sbjct: 165 SVVTFVETATQTKPVYIGKPKAIIMERAIAHLGVEKEQVIMVGDNYETDIQSGIQNGIDS 224
Query: 339 LLVLTGDT 346
LLV +G T
Sbjct: 225 LLVTSGFT 232
>pdb|1PW5|A Chain A, Putative Nagd Protein
Length = 253
Score = 109 bits (273), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 139/288 (48%), Gaps = 39/288 (13%)
Query: 92 LNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHL 151
L+ + + D DG +L++ L+ G+ + + +LK K+ + TNNS+ + + KL++
Sbjct: 2 LDKIELFILDXDGTFYLDDSLLPGSLEFLETLKEKNKRFVFFTNNSSLGAQDYVRKLRNX 61
Query: 152 GFNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPG 211
G + + ++ + + A++ K + + +++G+ + G PD
Sbjct: 62 GVDVPDDAVVTSGEITAEHXLKRFG-RCRIFLLGTPQLKKVFEAYGHVIDEENPDF---- 116
Query: 212 RDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPM--G 269
VV+GFD +++ +L K AC L ++AT+ D + P G
Sbjct: 117 ------------------VVLGFDKTLTYERL-KKACILLRKGKFYIATHPDINCPSKEG 157
Query: 270 PHVTVPGTGSMVAAVKTGAQREP-VVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDI 328
P VP GS+ AA++ R+P ++ GKP+ L+ + EK+ + ER +GDR TD+
Sbjct: 158 P---VPDAGSIXAAIEASTGRKPDLIAGKPNPLVVDVISEKFGVPKERXAXVGDRLYTDV 214
Query: 329 RLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGD 376
+LG N G ++LVLTG+TT ED E D+ +LG+
Sbjct: 215 KLGKNAGIVSILVLTGETT---------PEDLERAETKPDFVFKNLGE 253
>pdb|3EPR|A Chain A, Crystal Structure Of Putative Had Superfamily Hydrolase
From Streptococcus Agalactiae
Length = 264
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 81/258 (31%), Positives = 124/258 (48%), Gaps = 27/258 (10%)
Query: 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153
++ L D DG ++ I ++ + L+ G VTNN+T+T E + L+ GF
Sbjct: 4 AYKGYLIDLDGTIYKGKSRIPAGERFIERLQEKGIPYMLVTNNTTRTPESVQEMLR--GF 61
Query: 154 NAE-PNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGR 212
N E P E I TA +A ++ K AY++G G+ I + G D P
Sbjct: 62 NVETPLETIYTATMATVDYMNDMNRGKTAYVIGEEGLK-----KAIADAGYVEDTKNPAY 116
Query: 213 DLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHV 272
VVVG D ++++ KL A + N LF+ TN D + P +
Sbjct: 117 -----------------VVVGLDWNVTYDKLATATLAIQN-GALFIGTNPDLNIPTERGL 158
Query: 273 TVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGY 332
+PG GS+ A ++ + +PV IGKP+ +I + +E N+ + +M+GD TDI G
Sbjct: 159 -LPGAGSLNALLEAATRIKPVFIGKPNAIIMNKALEILNIPRNQAVMVGDNYLTDIMAGI 217
Query: 333 NNGFQTLLVLTGDTTMEK 350
NN TLLV TG TT+E+
Sbjct: 218 NNDIDTLLVTTGFTTVEE 235
>pdb|3PDW|A Chain A, Crystal Structure Of Putative P-Nitrophenyl Phosphatase
From Bacillus Subtilis
Length = 266
Score = 102 bits (253), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 83/292 (28%), Positives = 127/292 (43%), Gaps = 38/292 (13%)
Query: 92 LNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHL 151
L ++ L D DG ++ E I A + + +LK G +VTNNS++T +Q+ KL
Sbjct: 3 LKTYKGYLIDLDGTMYNGTEKIEEACEFVRTLKDRGVPYLFVTNNSSRTPKQVADKLVSF 62
Query: 152 GFNAEPNEIIGTAYLAAQYLKKHLDPKKKA--YIVGSSGIADELNLAGIENFGVGPDVMI 209
A ++ T+ AQ++ + KK A Y++G GI + G+ G D
Sbjct: 63 DIPATEEQVFTTSMATAQHIAQQ---KKDASVYVIGEEGIRQAIEENGLTFGGENADF-- 117
Query: 210 PGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMG 269
VVVG D I++ K C F++TN D + P
Sbjct: 118 --------------------VVVGIDRSITYEKF-AVGCLAIRNGARFISTNGDIAIPTE 156
Query: 270 PHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIR 329
+ +PG GS+ + + +PV IGKP +I + + TLM+GD TDI
Sbjct: 157 RGL-LPGNGSLTSVLTVSTGVQPVFIGKPESIIMEQAMRVLGTDVSETLMVGDNYATDIM 215
Query: 330 LGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381
G N G TLLV TG T E ++D E + D SL + +P++
Sbjct: 216 AGINAGMDTLLVHTGVTKREHM-----TDDMEKPTHAID----SLTEWIPYI 258
>pdb|1YDF|A Chain A, Crystal Structure Of A Had-like Phosphatase From
Streptococcus Pneumoniae
Length = 257
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 76/253 (30%), Positives = 115/253 (45%), Gaps = 26/253 (10%)
Query: 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAE-P 157
L D DG ++ + I + ++ L+ +VTNN+T+T E + L FN + P
Sbjct: 7 LIDLDGTIYKGKDRIPAGETFVHELQKRDIPYLFVTNNTTRTPESVKEMLAQ-NFNIDTP 65
Query: 158 NEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTD 217
+ TA LA L +K Y+VG +G+ + + AG D
Sbjct: 66 LSTVYTATLATIDYMNDLGLEKTVYVVGEAGLKEAIKAAGYVE----------------D 109
Query: 218 HEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGT 277
EK VVVG D + + K A + F+ TN D + P + +PG
Sbjct: 110 KEK------PAYVVVGLDWQVDYEKFATATLAIQK-GAHFIGTNPDLNIPTERGL-LPGA 161
Query: 278 GSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQ 337
GS++ ++ + +PV IGKP+ +I +E L E +M+GD TDIR G +NG
Sbjct: 162 GSLITLLEVATRVKPVYIGKPNAIIMDKAVEHLGLEREELIMVGDNYLTDIRAGIDNGIP 221
Query: 338 TLLVLTGDTTMEK 350
TLLV TG T E+
Sbjct: 222 TLLVTTGFTKAEE 234
>pdb|2C4N|A Chain A, Nagd From E.Coli K-12 Strain
Length = 250
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/253 (27%), Positives = 117/253 (46%), Gaps = 31/253 (12%)
Query: 98 VLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEP 157
V+ D DGVL +N + GA + ++ + G + +TN ++T + L + G + P
Sbjct: 6 VICDIDGVLMHDNVAVPGAAEFLHGIMDKGLPLVLLTNYPSQTGQDLANRFATAGVDV-P 64
Query: 158 NEIIGTAYLA-AQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKT 216
+ + T+ +A A +L++ KKAY+VG + EL AG V PD +I G
Sbjct: 65 DSVFYTSAMATADFLRRQ--EGKKAYVVGEGALIHELYKAGFTITDVNPDFVIVG----- 117
Query: 217 DHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPG 276
+ N D +M A Y F+ATN D P
Sbjct: 118 ETRSYNWD------------------MMHKAAYFVANGARFIATNPDTH----GRGFYPA 155
Query: 277 TGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGF 336
G++ A ++ + R+P +GKPS I + K + E T+++GD TDI G+ G
Sbjct: 156 CGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQAGL 215
Query: 337 QTLLVLTGDTTME 349
+T+LVL+G ++++
Sbjct: 216 ETILVLSGVSSLD 228
>pdb|1WVI|A Chain A, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|B Chain B, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|C Chain C, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
pdb|1WVI|D Chain D, Crystal Structure Of Putative Phosphatase From
Streptococcus Mutans Ua159
Length = 257
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 130/284 (45%), Gaps = 35/284 (12%)
Query: 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153
++ L D DG ++ + I + + L+ VTNN+T+T E ++ ++ F
Sbjct: 2 TYKGYLIDLDGTIYKGKDRIPAGEDFVKRLQERQLPYILVTNNTTRTPE-MVQEMLATSF 60
Query: 154 NAE-PNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGR 212
N + P E I TA LA + K AY++G +G+ + AG
Sbjct: 61 NIKTPLETIYTATLATIDYMNDMKRGKTAYVIGETGLKKAVAEAG--------------- 105
Query: 213 DLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHV 272
+ D E + VVVG D+++++ KL A + +F+ TN D + P +
Sbjct: 106 -YREDSE------NPAYVVVGLDTNLTYEKLTLATLAIQK-GAVFIGTNPDLNIPTERGL 157
Query: 273 TVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGY 332
+PG G+++ ++ + +P++IGKP +I + +++ + +M+GD TDI G
Sbjct: 158 -LPGAGAILFLLEKATRVKPIIIGKPEAVIMNKALDRLGVKRHEAIMVGDNYLTDITAGI 216
Query: 333 NNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGD 376
N TLLV TG ++K E+ D+ LSSL +
Sbjct: 217 KNDIATLLVTTG---------FTKPEEVPALPIQPDFVLSSLAE 251
>pdb|1YS9|A Chain A, Crystal Sructure Of Phosphatase Spy1043 From Streptococcus
Pyogenes
Length = 254
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/253 (28%), Positives = 118/253 (46%), Gaps = 26/253 (10%)
Query: 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPN 158
L D DG ++ I ++ + L+ G VTNN+T+T E + L + F+ E +
Sbjct: 7 LIDLDGTIYQGKNRIPAGERFIKRLQERGIPYLLVTNNTTRTPEMVQSMLAN-QFHVETS 65
Query: 159 -EIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTD 217
E I TA +A ++ K AY++G +G+ + AG
Sbjct: 66 IETIYTATMATVDYMNDMNRGKTAYVIGETGLKSAIAAAGY------------------- 106
Query: 218 HEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGT 277
E+L + VVVG DS +++ +++ A LF+ TN D + P + +PG
Sbjct: 107 VEELE---NPAYVVVGLDSQVTY-EMLAIATLAIQKGALFIGTNPDLNIPTERGL-MPGA 161
Query: 278 GSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQ 337
G++ A ++ + +PV IGKP+ +I + +E + +M+GD TDI G N
Sbjct: 162 GALNALLEAATRVKPVFIGKPNAIIMNKSLEVLGIQRSEAVMVGDNYLTDIMAGIQNDIA 221
Query: 338 TLLVLTGDTTMEK 350
T+LV TG T E+
Sbjct: 222 TILVTTGFTRPEE 234
>pdb|2HX1|A Chain A, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|B Chain B, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|C Chain C, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
pdb|2HX1|D Chain D, Crystal Structure Of Possible Sugar Phosphatase, Had
Superfamily (Zp_00311070.1) From Cytophaga Hutchinsonii
Atcc 33406 At 2.10 A Resolution
Length = 284
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 119/275 (43%), Gaps = 20/275 (7%)
Query: 89 KDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKL 148
K L + + D GVL N L+ G + + LK+ G+ + VTN+++++ EQL
Sbjct: 8 KSLLPKYKCIFFDAFGVLKTYNGLLPGIENTFDYLKAQGQDYYIVTNDASRSPEQLADSY 67
Query: 149 KHLG-FNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDV 207
LG F+ ++II + + +Y+ +D AY+ G++ A+ L GI+ V
Sbjct: 68 HKLGLFSITADKIISSGXITKEYIDLKVDGGIVAYL-GTANSANYLVSDGIKXLPVSA-- 124
Query: 208 MIPGRDLKTDHEKLNLDPHVGAVVVGFDSHIS-FPKLMKAACYLTNPNTLFVATNTDESF 266
D + V A+V+ D + F L K L + NTD ++
Sbjct: 125 --------IDDSNIG---EVNALVLLDDEGFNWFHDLNKTVNLLRKRTIPAIVANTDNTY 173
Query: 267 PMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSY----LIEKYNLNPERTLMIGD 322
P+ G + +++ R + GKP + L +K ++ L +GD
Sbjct: 174 PLTKTDVAIAIGGVATXIESILGRRFIRFGKPDSQXFXFAYDXLRQKXEISKREILXVGD 233
Query: 323 RGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKS 357
+TDI G G T LVLTG+T ++ A KS
Sbjct: 234 TLHTDILGGNKFGLDTALVLTGNTRIDDAETKIKS 268
>pdb|2HO4|A Chain A, Crystal Structure Of Protein From Mouse Mm.236127
pdb|2HO4|B Chain B, Crystal Structure Of Protein From Mouse Mm.236127
Length = 259
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/252 (24%), Positives = 102/252 (40%), Gaps = 30/252 (11%)
Query: 93 NSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLG 152
+ VL D +G L +E+ + GA + + L++ + +VTN + +T++ L+ +LK L
Sbjct: 5 RALKAVLVDLNGTLHIEDAAVPGAQEALKRLRATSVXVRFVTNTTKETKKDLLERLKKLE 64
Query: 153 FNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGR 212
F +EI T+ AA+ L IE V P +++ R
Sbjct: 65 FEISEDEIF-TSLTAARNL--------------------------IEQKQVRPXLLLDDR 97
Query: 213 DLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHV 272
L DP+ AVV+G +L+ A L +A + + +
Sbjct: 98 ALPEFTGVQTQDPN--AVVIGLAPEHFHYQLLNQAFRLLLDGAPLIAIHKARYYKRKDGL 155
Query: 273 TVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGY 332
+ G G V A++ + V+GKP K + + PE + IGD D+
Sbjct: 156 AL-GPGPFVTALEYATDTKAXVVGKPEKTFFLEALRDADCAPEEAVXIGDDCRDDVDGAQ 214
Query: 333 NNGFQTLLVLTG 344
N G +LV TG
Sbjct: 215 NIGXLGILVKTG 226
>pdb|3HLT|A Chain A, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
pdb|3HLT|C Chain C, The Crystal Structure Of Human Haloacid Dehalogenase-Like
Hydrolase Domain Containing 2 (Hdhd2)
Length = 266
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/252 (23%), Positives = 101/252 (40%), Gaps = 30/252 (11%)
Query: 93 NSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLG 152
+ VL D G L +E+ + GA + + L+ I +VTN + ++++ L+ +L+ L
Sbjct: 5 RALKAVLVDLSGTLHIEDAAVPGAQEALKRLRGASVIIRFVTNTTKESKQDLLERLRKLE 64
Query: 153 FNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGR 212
F+ +EI T+ AA+ L +E V P +++ R
Sbjct: 65 FDISEDEIF-TSLTAARSL--------------------------LERKQVRPMLLVDDR 97
Query: 213 DLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHV 272
L DP+ AVV+G +++ A L +A + + +
Sbjct: 98 ALPDFKGIQTSDPN--AVVMGLAPEHFHYQILNQAFRLLLDGAPLIAIHKARYYKRKDGL 155
Query: 273 TVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGY 332
+ G G V A++ + V+GKP K + PE +MIGD D+
Sbjct: 156 AL-GPGPFVTALEYATDTKATVVGKPEKTFFLEALRGTGCEPEEAVMIGDDCRDDVGGAQ 214
Query: 333 NNGFQTLLVLTG 344
+ G +LV TG
Sbjct: 215 DVGMLGILVKTG 226
>pdb|2X4D|A Chain A, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
pdb|2X4D|B Chain B, Crystal Structure Of Human Phospholysine Phosphohistidine
Inorganic Pyrophosphate Phosphatase Lhpp
Length = 271
Score = 42.7 bits (99), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 115/290 (39%), Gaps = 45/290 (15%)
Query: 98 VLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153
VL D GVL+ I+G+ + + LK K+ + TN S +R +L+ +L+ LGF
Sbjct: 15 VLLDISGVLYDSGAGGGTAIAGSVEAVARLKRSRLKVRFCTNESAASRAELVGQLQRLGF 74
Query: 154 NAEPNEIIGTAYLAAQYLKKH-LDPKKKAYIVGSSGIADELNLAGIENFGVGPD-VMIPG 211
+ E+ A A Q LK+ L P Y++ G+ E + N P+ V+I
Sbjct: 75 DISEQEVTAPAPAACQILKERGLRP----YLLIHDGVRSEFDQIDTSN----PNCVVIAD 126
Query: 212 RDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPH 271
++ +N +F LM+ L P + + + G
Sbjct: 127 AGESFSYQNMN---------------NAFQVLME----LEKPVLISLGKGRYYAATSGLM 167
Query: 272 VTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLG 331
+ V G + A++ + V+GKPS ++ + + +MIGD D+
Sbjct: 168 LDV---GPYMKALEYACGIKAEVVGKPSPEFFKSALQAIGVEAHQAVMIGDDIVGDVGGA 224
Query: 332 YNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381
G + L V TG + DE + AD Y+ +L + + L
Sbjct: 225 QRCGMRALQVRTGKF---------RPSDEHHPEVKADGYVDNLAEAVDLL 265
>pdb|2GO7|A Chain A, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|B Chain B, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|C Chain C, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
pdb|2GO7|D Chain D, Crystal Structure Of A Hydrolase From Haloacid
Dehalogenase-Like Family (Sp_2064) From Streptococcus
Pneumoniae Tigr4 At 2.10 A Resolution
Length = 207
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 27/45 (60%), Gaps = 1/45 (2%)
Query: 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTL 339
+ KPS +YL++KY LN + T IGDR D+ N+G Q++
Sbjct: 138 VRKPSPEAATYLLDKYQLNSDNTYYIGDR-TLDVEFAQNSGIQSI 181
>pdb|2HOQ|A Chain A, Crystal Structure Of The Probable Haloacid Dehalogenase
(Ph1655) From Pyrococcus Horikoshii Ot3
Length = 241
Score = 35.8 bits (81), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 39/88 (44%), Gaps = 10/88 (11%)
Query: 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAW 354
+ KP I ++ +N+ PE LM+GDR +DI G +T+ G
Sbjct: 148 VKKPHPKIFKKALKAFNVKPEEALMVGDRLYSDIYGAKRVGMKTVWFRYG---------- 197
Query: 355 SKSEDEEYKSRVADYYLSSLGDMLPFLS 382
SE E + ADY + +L +L L+
Sbjct: 198 KHSERELEYRKYADYEIDNLESLLEVLA 225
>pdb|3GYG|A Chain A, Crystal Structure Of Yhjk (Haloacid Dehalogenase-Like
Hydrolase Protein) From Bacillus Subtilis
pdb|3GYG|B Chain B, Crystal Structure Of Yhjk (Haloacid Dehalogenase-Like
Hydrolase Protein) From Bacillus Subtilis
pdb|3GYG|C Chain C, Crystal Structure Of Yhjk (Haloacid Dehalogenase-Like
Hydrolase Protein) From Bacillus Subtilis
pdb|3GYG|D Chain D, Crystal Structure Of Yhjk (Haloacid Dehalogenase-Like
Hydrolase Protein) From Bacillus Subtilis
Length = 289
Score = 35.0 bits (79), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 293 VVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIR 329
+ IG I ++ +EKYNLN ER + GD GN D+R
Sbjct: 206 IPIGTGKNEIVTFXLEKYNLNTERAIAFGDSGN-DVR 241
>pdb|2W4M|A Chain A, The Crystal Structure Of Human N-Acetylneuraminic Acid
Phosphatase, Nanp
Length = 270
Score = 32.0 bits (71), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)
Query: 282 AAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQ 337
A V G QRE KP+ I Y + P +M+GD TDI+ G N G +
Sbjct: 175 AVVVGGEQREE----KPAPSIFYYCCNLLGVQPGDCVMVGDTLETDIQGGLNAGLK 226
>pdb|2SCP|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|2SCP|B Chain B, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Nereis Diversicolor Refined At 2.0 Angstroms Resolution
pdb|1Q80|A Chain A, Solution Structure And Dynamics Of Nereis Sarcoplasmic
Calcium Binding Protein
Length = 174
Score = 30.8 bits (68), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFY 132
SFD + T+ DG+L LE +I+G+D MN S K+F+
Sbjct: 133 SFDAIDTNNDGLLSLEEFVIAGSDFFMNDGDST-NKVFW 170
>pdb|3OCY|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Complexed With Inorganic Phosphate
pdb|3OCZ|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Complexed With The Inhibitor Adenosine
5-O-Thiomonophosphate
Length = 262
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 103 DGVLWL---ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQ-LIVKLKHLGFNA 155
D W+ ++ + GA + N + S K+FYVTN T + I +K LGFN
Sbjct: 90 DWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG 146
>pdb|3SF0|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D64n Complexed With 5'amp
Length = 262
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 103 DGVLWL---ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQ-LIVKLKHLGFNA 155
D W+ ++ + GA + N + S K+FYVTN T + I +K LGFN
Sbjct: 90 DWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG 146
>pdb|3OCU|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With Nmn
pdb|3OCV|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With 5'-Amp
pdb|3OCW|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With 3'-Amp
pdb|3OCX|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Mutant D66n Complexed With 2'-Amp
Length = 262
Score = 30.4 bits (67), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/57 (33%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 103 DGVLWL---ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQ-LIVKLKHLGFNA 155
D W+ ++ + GA + N + S K+FYVTN T + I +K LGFN
Sbjct: 90 DWTRWVDARQSRAVPGAVEFNNYVNSHNGKVFYVTNRKDSTEKSGTIDDMKRLGFNG 146
>pdb|2HQ1|A Chain A, Crystal Structure Of Orf 1438 A Putative GlucoseRIBITOL
Dehydrogenase From Clostridium Thermocellum
Length = 247
Score = 30.0 bits (66), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/85 (24%), Positives = 44/85 (51%), Gaps = 1/85 (1%)
Query: 117 DQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKHLD 176
+ V ++ + G+ I + NN+ TR+ L++K+ ++ N + +AYL + + K +
Sbjct: 72 NMVKTAMDAFGR-IDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKIML 130
Query: 177 PKKKAYIVGSSGIADELNLAGIENF 201
+K I+ + IA + AG N+
Sbjct: 131 KQKSGKIINITSIAGIIGNAGQANY 155
>pdb|3ET4|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase
pdb|3ET5|A Chain A, Structure Of Recombinant Haemophilus Influenzae E(P4) Acid
Phosphatase Complexed With Tungstate
Length = 255
Score = 28.5 bits (62), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 28/57 (49%), Gaps = 4/57 (7%)
Query: 103 DGVLWL---ENELISGADQVMNSLKSLGKKIFYVTNN-STKTREQLIVKLKHLGFNA 155
D W+ ++ + GA + N + S K+FYVTN + + I +K LGFN
Sbjct: 91 DWTRWVDARQSRAVPGAVEFNNYVNSHKGKVFYVTNRKDSSEKAGTIDDMKRLGFNG 147
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.135 0.395
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,986,516
Number of Sequences: 62578
Number of extensions: 458489
Number of successful extensions: 1348
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 1286
Number of HSP's gapped (non-prelim): 35
length of query: 383
length of database: 14,973,337
effective HSP length: 101
effective length of query: 282
effective length of database: 8,652,959
effective search space: 2440134438
effective search space used: 2440134438
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)