Query psy7233
Match_columns 383
No_of_seqs 168 out of 2062
Neff 7.8
Searched_HMMs 46136
Date Fri Aug 16 21:29:19 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy7233.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/7233hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG2882|consensus 100.0 3E-46 6.5E-51 346.0 27.8 290 86-382 13-304 (306)
2 COG0647 NagD Predicted sugar p 100.0 1.4E-44 3.1E-49 338.2 27.4 263 90-382 3-266 (269)
3 TIGR01457 HAD-SF-IIA-hyp2 HAD- 100.0 3.4E-40 7.3E-45 309.7 29.1 249 95-377 1-249 (249)
4 PRK10444 UMP phosphatase; Prov 100.0 4.9E-40 1.1E-44 307.9 29.2 245 95-377 1-245 (248)
5 TIGR01452 PGP_euk phosphoglyco 100.0 6.8E-40 1.5E-44 312.7 29.7 279 94-377 1-279 (279)
6 PLN02645 phosphoglycolate phos 100.0 9.8E-40 2.1E-44 316.1 31.0 289 84-382 17-308 (311)
7 TIGR01458 HAD-SF-IIA-hyp3 HAD- 100.0 8.4E-37 1.8E-41 288.0 28.5 249 95-382 1-255 (257)
8 TIGR01456 CECR5 HAD-superfamil 100.0 1.3E-34 2.9E-39 281.4 23.5 272 97-381 2-320 (321)
9 TIGR01460 HAD-SF-IIA Haloacid 100.0 8.1E-34 1.8E-38 264.5 25.0 232 98-344 1-236 (236)
10 KOG3040|consensus 100.0 1.1E-33 2.5E-38 247.8 19.1 251 93-382 5-257 (262)
11 TIGR01459 HAD-SF-IIA-hyp4 HAD- 100.0 2.4E-30 5.2E-35 242.0 24.3 232 89-343 2-242 (242)
12 COG0546 Gph Predicted phosphat 99.9 3.1E-22 6.8E-27 184.5 7.8 130 237-382 88-218 (220)
13 TIGR01422 phosphonatase phosph 99.9 2.3E-21 4.9E-26 182.3 12.9 128 238-381 99-252 (253)
14 PRK13288 pyrophosphatase PpaX; 99.9 5.7E-22 1.2E-26 181.6 8.1 128 239-382 83-211 (214)
15 PRK13226 phosphoglycolate phos 99.9 5.9E-22 1.3E-26 183.8 7.7 128 238-381 95-224 (229)
16 TIGR02253 CTE7 HAD superfamily 99.9 3.8E-21 8.2E-26 176.7 12.6 127 238-378 94-221 (221)
17 KOG1618|consensus 99.9 1.7E-20 3.6E-25 174.6 16.5 248 95-347 35-345 (389)
18 PRK10748 flavin mononucleotide 99.8 5.8E-21 1.3E-25 178.2 12.4 127 237-381 112-238 (238)
19 PLN02770 haloacid dehalogenase 99.8 3E-21 6.6E-26 181.2 9.6 122 238-376 108-230 (248)
20 TIGR03351 PhnX-like phosphonat 99.8 1.9E-21 4.1E-26 178.8 7.8 128 238-381 87-219 (220)
21 PRK13478 phosphonoacetaldehyde 99.8 1.4E-20 3.1E-25 178.4 13.1 129 238-382 101-255 (267)
22 TIGR01454 AHBA_synth_RP 3-amin 99.8 8.2E-21 1.8E-25 172.8 9.7 130 238-383 75-205 (205)
23 PLN03243 haloacid dehalogenase 99.8 2.1E-20 4.5E-25 176.6 11.6 124 239-381 110-234 (260)
24 TIGR01449 PGP_bact 2-phosphogl 99.8 6.6E-21 1.4E-25 173.9 7.0 128 238-381 85-213 (213)
25 PF13344 Hydrolase_6: Haloacid 99.8 4.5E-20 9.8E-25 149.4 11.0 101 98-199 1-101 (101)
26 COG0637 Predicted phosphatase/ 99.8 2.1E-20 4.5E-25 172.5 10.0 131 238-382 86-217 (221)
27 PRK10826 2-deoxyglucose-6-phos 99.8 7.8E-21 1.7E-25 175.2 5.5 126 237-379 91-217 (222)
28 PRK13223 phosphoglycolate phos 99.8 6.8E-20 1.5E-24 174.3 11.0 129 238-382 101-230 (272)
29 PRK11587 putative phosphatase; 99.8 9.3E-20 2E-24 167.7 10.2 121 238-378 83-204 (218)
30 PLN02575 haloacid dehalogenase 99.8 1.7E-19 3.6E-24 177.2 11.9 123 238-379 216-339 (381)
31 PLN02779 haloacid dehalogenase 99.8 2E-19 4.2E-24 172.3 11.2 125 238-378 144-269 (286)
32 PRK09449 dUMP phosphatase; Pro 99.8 2.9E-19 6.3E-24 164.7 10.9 127 238-382 95-223 (224)
33 PLN02940 riboflavin kinase 99.8 1.9E-19 4.1E-24 179.0 10.3 124 238-379 93-218 (382)
34 TIGR02254 YjjG/YfnB HAD superf 99.8 3.8E-19 8.2E-24 163.4 10.9 126 239-381 98-224 (224)
35 PRK13222 phosphoglycolate phos 99.8 1.2E-19 2.7E-24 166.9 7.6 130 237-382 92-222 (226)
36 PRK13225 phosphoglycolate phos 99.8 5.9E-19 1.3E-23 167.8 11.1 126 238-382 142-268 (273)
37 PRK10563 6-phosphogluconate ph 99.8 5.3E-19 1.1E-23 162.7 7.2 124 239-382 89-213 (221)
38 PRK14988 GMP/IMP nucleotidase; 99.8 1.7E-18 3.6E-23 160.2 10.1 106 238-348 93-200 (224)
39 PRK06769 hypothetical protein; 99.8 1.6E-17 3.4E-22 147.7 14.7 82 294-381 90-171 (173)
40 COG1011 Predicted hydrolase (H 99.8 3.9E-18 8.4E-23 157.2 10.9 130 237-382 98-227 (229)
41 PRK10725 fructose-1-P/6-phosph 99.8 2.5E-19 5.5E-24 160.4 2.7 97 240-342 90-186 (188)
42 TIGR01428 HAD_type_II 2-haloal 99.8 2.7E-18 5.7E-23 155.4 9.1 102 238-344 92-194 (198)
43 TIGR00213 GmhB_yaeD D,D-heptos 99.8 2.6E-17 5.7E-22 146.5 15.4 73 294-379 103-176 (176)
44 TIGR02252 DREG-2 REG-2-like, H 99.7 1.6E-17 3.5E-22 150.7 11.4 98 238-340 105-203 (203)
45 PRK08942 D,D-heptose 1,7-bisph 99.7 1.2E-16 2.5E-21 142.9 16.6 76 294-382 100-177 (181)
46 PLN02919 haloacid dehalogenase 99.7 7.7E-18 1.7E-22 185.9 7.5 123 239-377 162-285 (1057)
47 TIGR01990 bPGM beta-phosphoglu 99.7 1.6E-17 3.4E-22 148.2 8.1 98 238-342 87-185 (185)
48 TIGR02247 HAD-1A3-hyp Epoxide 99.7 4.5E-17 9.8E-22 148.8 11.1 112 238-352 94-206 (211)
49 TIGR02009 PGMB-YQAB-SF beta-ph 99.7 1.4E-17 2.9E-22 148.6 7.3 98 237-341 87-185 (185)
50 KOG3085|consensus 99.7 7.5E-17 1.6E-21 148.1 11.3 105 241-350 116-221 (237)
51 PRK06698 bifunctional 5'-methy 99.7 5.1E-17 1.1E-21 165.6 10.9 124 238-382 330-454 (459)
52 PF13242 Hydrolase_like: HAD-h 99.7 1.1E-16 2.5E-21 122.3 7.9 74 295-377 2-75 (75)
53 PHA02597 30.2 hypothetical pro 99.7 3.7E-17 8E-22 147.8 5.9 120 238-379 74-196 (197)
54 PRK09456 ?-D-glucose-1-phospha 99.7 5.5E-16 1.2E-20 140.5 13.3 109 239-352 85-195 (199)
55 PLN02811 hydrolase 99.7 2.8E-16 6E-21 144.8 8.9 124 238-378 78-207 (220)
56 TIGR01656 Histidinol-ppas hist 99.6 2.7E-15 5.9E-20 129.7 11.5 49 295-344 99-147 (147)
57 TIGR01993 Pyr-5-nucltdase pyri 99.6 2.1E-15 4.5E-20 134.9 10.9 97 238-341 84-184 (184)
58 TIGR01662 HAD-SF-IIIA HAD-supe 99.6 6.8E-15 1.5E-19 124.5 13.3 48 295-342 83-131 (132)
59 TIGR01509 HAD-SF-IA-v3 haloaci 99.6 3.2E-16 6.9E-21 139.1 4.6 98 238-341 85-183 (183)
60 TIGR01668 YqeG_hyp_ppase HAD s 99.6 4.1E-14 8.9E-19 125.3 13.8 56 296-351 90-145 (170)
61 COG2179 Predicted hydrolase of 99.6 2E-14 4.3E-19 123.3 10.7 49 295-343 91-139 (175)
62 TIGR01548 HAD-SF-IA-hyp1 haloa 99.6 5E-15 1.1E-19 134.0 6.8 88 241-334 109-197 (197)
63 PF13419 HAD_2: Haloacid dehal 99.5 2.5E-15 5.4E-20 131.3 3.9 99 238-341 77-176 (176)
64 KOG2914|consensus 99.5 4.4E-14 9.5E-19 129.3 10.9 124 238-378 92-219 (222)
65 TIGR01261 hisB_Nterm histidino 99.5 2.8E-13 6.1E-18 118.9 13.8 56 294-350 100-155 (161)
66 TIGR01691 enolase-ppase 2,3-di 99.5 1.3E-13 2.7E-18 127.0 10.2 105 237-345 94-199 (220)
67 PRK10530 pyridoxal phosphate ( 99.5 8.6E-13 1.9E-17 124.9 15.6 57 95-154 3-60 (272)
68 TIGR01664 DNA-3'-Pase DNA 3'-p 99.5 6.7E-13 1.5E-17 117.1 13.5 46 295-340 106-160 (166)
69 TIGR01549 HAD-SF-IA-v1 haloaci 99.5 5E-14 1.1E-18 122.0 5.5 88 240-335 66-154 (154)
70 TIGR01493 HAD-SF-IA-v2 Haloaci 99.5 5.2E-14 1.1E-18 124.6 5.6 86 238-334 90-175 (175)
71 cd01427 HAD_like Haloacid deha 99.4 9.8E-13 2.1E-17 109.7 11.5 49 292-341 91-139 (139)
72 PLN02954 phosphoserine phospha 99.4 4.6E-13 1E-17 123.3 10.1 126 239-381 85-223 (224)
73 TIGR00338 serB phosphoserine p 99.4 8.4E-13 1.8E-17 121.1 10.1 121 239-381 86-219 (219)
74 TIGR01685 MDP-1 magnesium-depe 99.4 1.9E-12 4.1E-17 114.7 10.8 51 296-347 110-162 (174)
75 PRK01158 phosphoglycolate phos 99.4 2.1E-12 4.6E-17 119.3 11.4 57 95-154 3-60 (230)
76 PHA02530 pseT polynucleotide k 99.3 1.2E-11 2.7E-16 119.0 13.8 49 296-345 250-299 (300)
77 COG0241 HisB Histidinol phosph 99.3 1.8E-11 3.9E-16 108.3 13.4 74 294-380 102-175 (181)
78 PRK05446 imidazole glycerol-ph 99.3 3.1E-11 6.7E-16 118.2 15.4 58 295-353 102-159 (354)
79 PRK10513 sugar phosphate phosp 99.3 9.1E-11 2E-15 111.2 17.8 57 95-154 3-60 (270)
80 TIGR01672 AphA HAD superfamily 99.3 9.4E-12 2E-16 115.6 10.5 103 238-348 114-217 (237)
81 TIGR01482 SPP-subfamily Sucros 99.3 1.9E-11 4.1E-16 112.4 12.5 53 98-153 1-54 (225)
82 PRK09484 3-deoxy-D-manno-octul 99.3 1.7E-11 3.7E-16 109.9 11.3 68 297-381 95-168 (183)
83 PRK10976 putative hydrolase; P 99.3 1.2E-10 2.6E-15 110.2 17.5 57 95-154 2-59 (266)
84 TIGR01670 YrbI-phosphatas 3-de 99.3 1.9E-11 4.2E-16 106.5 10.9 62 297-375 75-136 (154)
85 TIGR01487 SPP-like sucrose-pho 99.3 2.3E-11 5.1E-16 111.5 12.0 57 95-154 1-58 (215)
86 PRK11133 serB phosphoserine ph 99.3 2.9E-11 6.4E-16 117.4 12.6 124 239-381 182-315 (322)
87 PLN02887 hydrolase family prot 99.3 5.6E-11 1.2E-15 123.4 15.1 63 89-154 302-365 (580)
88 PRK03669 mannosyl-3-phosphogly 99.3 2.4E-10 5.2E-15 108.6 18.2 60 92-154 4-64 (271)
89 PRK15126 thiamin pyrimidine py 99.3 2.5E-10 5.4E-15 108.4 17.2 57 95-154 2-59 (272)
90 COG0561 Cof Predicted hydrolas 99.2 4.2E-10 9.2E-15 106.3 17.4 58 94-154 2-60 (264)
91 KOG3109|consensus 99.2 3.5E-11 7.5E-16 107.6 8.2 99 241-345 103-208 (244)
92 TIGR02726 phenyl_P_delta pheny 99.2 1.3E-10 2.8E-15 102.7 11.7 42 297-339 81-122 (169)
93 TIGR01491 HAD-SF-IB-PSPlk HAD- 99.2 1.4E-11 3E-16 111.1 4.4 102 238-344 80-192 (201)
94 PF09419 PGP_phosphatase: Mito 99.2 2E-10 4.4E-15 100.7 11.5 57 79-137 25-87 (168)
95 PRK00192 mannosyl-3-phosphogly 99.2 1.3E-10 2.8E-15 110.6 10.8 57 95-154 4-61 (273)
96 TIGR00099 Cof-subfamily Cof su 99.2 8.9E-10 1.9E-14 103.6 15.7 55 97-154 1-56 (256)
97 PRK09552 mtnX 2-hydroxy-3-keto 99.2 1.6E-11 3.5E-16 113.0 3.3 125 239-382 75-213 (219)
98 PRK13582 thrH phosphoserine ph 99.2 1.2E-10 2.5E-15 105.7 8.8 124 238-382 68-196 (205)
99 TIGR02463 MPGP_rel mannosyl-3- 99.1 4.4E-11 9.6E-16 110.0 6.0 54 98-154 2-56 (221)
100 PF08282 Hydrolase_3: haloacid 99.1 5.1E-10 1.1E-14 103.5 12.6 54 98-154 1-55 (254)
101 TIGR01681 HAD-SF-IIIC HAD-supe 99.1 5.7E-10 1.2E-14 94.1 11.2 41 96-136 1-54 (128)
102 TIGR01486 HAD-SF-IIB-MPGP mann 99.1 7.9E-09 1.7E-13 97.3 17.8 54 98-154 2-56 (256)
103 TIGR02461 osmo_MPG_phos mannos 99.1 3E-09 6.4E-14 98.5 14.6 55 97-154 1-55 (225)
104 TIGR01485 SPP_plant-cyano sucr 99.1 8.7E-09 1.9E-13 96.7 17.4 49 295-344 164-212 (249)
105 PRK11009 aphA acid phosphatase 99.1 3.6E-09 7.7E-14 98.4 14.3 44 296-347 173-216 (237)
106 PRK10187 trehalose-6-phosphate 99.1 3.1E-09 6.7E-14 100.9 14.1 63 300-382 176-241 (266)
107 TIGR02471 sucr_syn_bact_C sucr 99.0 1.1E-09 2.4E-14 101.8 10.0 54 97-154 1-54 (236)
108 TIGR01484 HAD-SF-IIB HAD-super 98.9 1.7E-08 3.8E-13 91.5 13.6 43 295-338 160-202 (204)
109 PF00702 Hydrolase: haloacid d 98.9 7E-10 1.5E-14 100.6 4.2 86 235-335 124-215 (215)
110 TIGR03333 salvage_mtnX 2-hydro 98.9 2E-09 4.3E-14 98.7 7.1 124 240-382 72-209 (214)
111 TIGR01663 PNK-3'Pase polynucle 98.9 1E-08 2.2E-13 105.4 11.2 41 295-336 261-305 (526)
112 TIGR00685 T6PP trehalose-phosp 98.9 1.4E-07 3.1E-12 88.3 17.3 65 300-382 169-240 (244)
113 TIGR02137 HSK-PSP phosphoserin 98.7 4.3E-08 9.3E-13 89.3 9.3 119 238-382 68-196 (203)
114 TIGR01489 DKMTPPase-SF 2,3-dik 98.7 2.1E-08 4.5E-13 89.2 7.2 38 295-336 146-183 (188)
115 PTZ00445 p36-lilke protein; Pr 98.7 6.1E-08 1.3E-12 87.3 10.0 51 293-344 153-207 (219)
116 TIGR01686 FkbH FkbH-like domai 98.7 8E-08 1.7E-12 93.7 11.4 41 296-337 85-125 (320)
117 PRK12702 mannosyl-3-phosphogly 98.7 3.7E-07 8.1E-12 86.6 14.6 57 95-154 1-58 (302)
118 PTZ00174 phosphomannomutase; P 98.7 2.1E-07 4.5E-12 87.3 12.9 53 94-149 4-57 (247)
119 PF08645 PNK3P: Polynucleotide 98.6 1.6E-07 3.5E-12 82.2 9.7 45 295-339 95-153 (159)
120 PLN02382 probable sucrose-phos 98.6 2E-06 4.3E-11 86.7 17.0 47 295-344 174-223 (413)
121 PRK14502 bifunctional mannosyl 98.5 2.9E-06 6.3E-11 88.8 17.2 58 94-154 415-473 (694)
122 TIGR01490 HAD-SF-IB-hyp1 HAD-s 98.5 3.6E-08 7.8E-13 89.1 2.7 99 239-339 88-195 (202)
123 TIGR01488 HAD-SF-IB Haloacid D 98.4 1.8E-07 3.9E-12 82.5 4.5 38 296-334 140-177 (177)
124 PF05116 S6PP: Sucrose-6F-phos 98.4 1.4E-06 2.9E-11 81.9 9.3 190 96-344 3-209 (247)
125 PRK14501 putative bifunctional 98.3 3E-05 6.5E-10 83.8 18.5 57 93-152 490-553 (726)
126 smart00577 CPDc catalytic doma 98.3 9.1E-08 2E-12 82.7 -1.0 90 240-337 47-137 (148)
127 COG4229 Predicted enolase-phos 98.3 9E-06 1.9E-10 71.2 11.2 193 96-347 5-210 (229)
128 TIGR01689 EcbF-BcbF capsule bi 98.2 4.3E-06 9.3E-11 70.1 7.6 47 96-142 2-55 (126)
129 PLN02205 alpha,alpha-trehalose 98.2 8E-05 1.7E-09 81.3 18.6 54 94-150 595-653 (854)
130 TIGR01684 viral_ppase viral ph 98.2 3.5E-06 7.6E-11 79.9 6.8 68 92-162 123-194 (301)
131 TIGR01512 ATPase-IB2_Cd heavy 98.1 4.3E-05 9.3E-10 79.7 14.7 116 236-382 360-479 (536)
132 PLN02580 trehalose-phosphatase 98.1 0.00019 4.1E-09 71.2 18.3 64 300-382 303-374 (384)
133 PRK10671 copA copper exporting 98.1 0.00018 3.9E-09 79.0 20.0 117 236-382 648-765 (834)
134 PRK08238 hypothetical protein; 98.1 6.1E-06 1.3E-10 84.5 7.7 95 240-346 74-169 (479)
135 TIGR01525 ATPase-IB_hvy heavy 98.1 0.00016 3.5E-09 75.8 17.4 115 236-382 382-500 (556)
136 smart00775 LNS2 LNS2 domain. T 98.1 6.7E-06 1.5E-10 71.8 5.9 54 97-150 1-66 (157)
137 PLN03017 trehalose-phosphatase 98.0 0.00024 5.2E-09 69.9 17.0 65 300-382 285-356 (366)
138 TIGR01511 ATPase-IB1_Cu copper 98.0 9.5E-05 2.1E-09 77.6 15.1 114 236-382 403-519 (562)
139 PLN02151 trehalose-phosphatase 98.0 0.00023 4.9E-09 69.9 16.6 50 95-148 98-153 (354)
140 COG0560 SerB Phosphoserine pho 98.0 1.6E-05 3.5E-10 72.9 7.5 44 296-340 142-185 (212)
141 TIGR01544 HAD-SF-IE haloacid d 98.0 2.5E-05 5.4E-10 74.1 8.2 41 293-334 179-230 (277)
142 PHA03398 viral phosphatase sup 97.9 2.2E-05 4.7E-10 74.7 7.0 67 93-162 126-196 (303)
143 PF06437 ISN1: IMP-specific 5' 97.9 0.00042 9.1E-09 67.5 14.6 92 55-151 110-206 (408)
144 TIGR02244 HAD-IG-Ncltidse HAD 97.8 1.4E-05 3E-10 78.1 4.1 102 239-345 185-326 (343)
145 KOG2961|consensus 97.8 0.00015 3.2E-09 61.8 9.5 104 240-349 63-174 (190)
146 COG1778 Low specificity phosph 97.8 4.5E-05 9.8E-10 65.4 6.4 109 90-202 3-124 (170)
147 TIGR01533 lipo_e_P4 5'-nucleot 97.8 6.7E-05 1.5E-09 71.0 7.6 68 94-161 74-169 (266)
148 PLN02423 phosphomannomutase 97.6 0.00014 3E-09 68.3 6.7 54 93-150 4-59 (245)
149 PRK11590 hypothetical protein; 97.6 0.00012 2.7E-09 66.8 5.7 38 304-343 166-203 (211)
150 TIGR01675 plant-AP plant acid 97.4 0.00037 8.1E-09 64.4 6.6 61 94-154 76-163 (229)
151 PRK11033 zntA zinc/cadmium/mer 97.4 0.021 4.5E-07 62.1 20.9 113 237-382 567-681 (741)
152 TIGR01680 Veg_Stor_Prot vegeta 97.3 0.00052 1.1E-08 64.7 7.0 61 94-154 100-188 (275)
153 PF03767 Acid_phosphat_B: HAD 97.3 0.00015 3.2E-09 67.3 3.1 62 93-154 70-158 (229)
154 COG4087 Soluble P-type ATPase 97.1 0.0066 1.4E-07 50.7 10.2 117 238-382 30-147 (152)
155 PF08235 LNS2: LNS2 (Lipin/Ned 97.0 0.0012 2.6E-08 57.3 5.0 41 97-137 1-53 (157)
156 TIGR01545 YfhB_g-proteo haloac 96.9 0.0013 2.9E-08 60.2 5.1 36 305-342 166-201 (210)
157 KOG1615|consensus 96.8 0.0047 1E-07 55.0 7.4 33 296-333 159-191 (227)
158 PF12689 Acid_PPase: Acid Phos 96.6 0.0049 1.1E-07 54.4 6.4 48 300-348 110-157 (169)
159 COG3769 Predicted hydrolase (H 96.5 0.0056 1.2E-07 55.6 6.1 58 94-154 6-63 (274)
160 TIGR01522 ATPase-IIA2_Ca golgi 96.4 0.017 3.6E-07 64.1 10.1 135 230-382 518-671 (884)
161 COG2503 Predicted secreted aci 96.3 0.0071 1.5E-07 55.7 5.3 62 94-155 78-167 (274)
162 smart00577 CPDc catalytic doma 96.2 0.013 2.9E-07 50.3 6.6 54 96-153 3-83 (148)
163 PF06888 Put_Phosphatase: Puta 96.2 0.2 4.3E-06 46.7 14.5 52 300-352 152-207 (234)
164 TIGR02251 HIF-SF_euk Dullard-l 96.0 0.00033 7.2E-09 61.5 -4.7 95 241-342 45-139 (162)
165 PLN03063 alpha,alpha-trehalose 95.9 0.25 5.3E-06 54.2 16.1 55 95-152 507-571 (797)
166 PF12689 Acid_PPase: Acid Phos 95.8 0.0027 5.7E-08 56.1 0.4 23 239-261 46-68 (169)
167 PF02358 Trehalose_PPase: Treh 95.7 0.05 1.1E-06 50.4 8.4 45 299-344 166-218 (235)
168 TIGR01459 HAD-SF-IIA-hyp4 HAD- 95.2 0.0088 1.9E-07 55.8 1.6 94 235-336 21-116 (242)
169 TIGR01116 ATPase-IIA1_Ca sarco 95.2 0.12 2.6E-06 57.5 10.6 137 228-382 525-683 (917)
170 PF03031 NIF: NLI interacting 95.2 0.012 2.7E-07 50.9 2.2 41 96-137 1-61 (159)
171 COG1877 OtsB Trehalose-6-phosp 95.1 0.98 2.1E-05 42.8 15.1 53 94-149 17-76 (266)
172 PF11019 DUF2608: Protein of u 95.1 0.33 7E-06 45.8 11.7 48 296-344 160-211 (252)
173 PF05761 5_nucleotid: 5' nucle 94.6 0.0083 1.8E-07 61.0 -0.5 43 303-345 284-327 (448)
174 COG4996 Predicted phosphatase 94.5 0.13 2.8E-06 43.1 6.4 56 96-154 1-81 (164)
175 COG2217 ZntA Cation transport 94.5 0.65 1.4E-05 50.1 13.4 109 241-381 540-651 (713)
176 COG4359 Uncharacterized conser 94.4 1.2 2.6E-05 39.7 12.4 26 310-336 155-180 (220)
177 TIGR02468 sucrsPsyn_pln sucros 94.1 1.7 3.8E-05 48.6 16.1 59 100-165 777-840 (1050)
178 PF06941 NT5C: 5' nucleotidase 94.0 0.083 1.8E-06 47.3 4.8 31 109-139 71-101 (191)
179 PF12710 HAD: haloacid dehalog 93.3 0.094 2E-06 46.3 3.8 21 311-332 172-192 (192)
180 TIGR02251 HIF-SF_euk Dullard-l 93.1 0.17 3.6E-06 44.3 5.0 41 96-137 2-67 (162)
181 TIGR01428 HAD_type_II 2-haloal 92.6 0.72 1.6E-05 41.1 8.6 51 110-163 91-141 (198)
182 TIGR01106 ATPase-IIC_X-K sodiu 92.4 1.1 2.5E-05 50.4 11.7 42 110-154 567-608 (997)
183 PF05152 DUF705: Protein of un 92.1 0.47 1E-05 45.0 6.9 68 92-162 119-190 (297)
184 TIGR02250 FCP1_euk FCP1-like p 92.1 0.25 5.4E-06 43.0 4.9 23 113-136 60-82 (156)
185 TIGR01523 ATPase-IID_K-Na pota 90.8 2.3 5E-05 48.2 11.9 41 110-153 645-685 (1053)
186 PRK11587 putative phosphatase; 90.6 1.9 4.1E-05 39.2 9.3 49 109-161 81-129 (218)
187 KOG2630|consensus 90.6 0.81 1.8E-05 42.1 6.5 103 238-346 123-229 (254)
188 KOG2470|consensus 89.8 0.95 2.1E-05 44.1 6.7 98 241-343 243-376 (510)
189 COG1778 Low specificity phosph 89.4 0.19 4.2E-06 43.4 1.5 41 298-339 83-123 (170)
190 PLN03064 alpha,alpha-trehalose 89.2 0.78 1.7E-05 50.9 6.4 56 95-153 591-662 (934)
191 COG0637 Predicted phosphatase/ 88.7 3.1 6.7E-05 38.2 9.1 75 109-199 84-158 (221)
192 TIGR02245 HAD_IIID1 HAD-superf 88.4 0.85 1.8E-05 41.2 5.0 42 94-136 20-69 (195)
193 TIGR01533 lipo_e_P4 5'-nucleot 88.3 0.23 5E-06 47.1 1.4 85 238-332 118-205 (266)
194 COG5610 Predicted hydrolase (H 87.5 0.16 3.5E-06 50.9 -0.1 49 293-341 153-201 (635)
195 PF13419 HAD_2: Haloacid dehal 87.5 0.74 1.6E-05 39.3 4.1 53 108-163 74-126 (176)
196 TIGR01511 ATPase-IB1_Cu copper 87.5 4.2 9.1E-05 42.9 10.4 98 94-199 384-488 (562)
197 COG4030 Uncharacterized protei 87.5 9.2 0.0002 35.4 11.0 40 300-341 193-233 (315)
198 KOG2116|consensus 86.7 1.2 2.7E-05 46.7 5.6 45 94-138 529-585 (738)
199 TIGR01652 ATPase-Plipid phosph 86.7 4.2 9.2E-05 46.2 10.5 38 109-146 629-666 (1057)
200 KOG0207|consensus 86.6 33 0.00071 37.9 16.2 87 240-346 725-813 (951)
201 PLN02423 phosphomannomutase 86.4 0.81 1.8E-05 42.8 3.9 30 313-343 199-232 (245)
202 KOG3189|consensus 86.3 1.8 3.8E-05 39.1 5.7 52 97-155 13-65 (252)
203 PLN02645 phosphoglycolate phos 85.7 5 0.00011 38.9 9.1 90 238-340 44-136 (311)
204 TIGR01525 ATPase-IB_hvy heavy 85.6 6.3 0.00014 41.5 10.5 101 94-199 363-469 (556)
205 PLN02770 haloacid dehalogenase 85.5 1.5 3.2E-05 41.0 5.2 51 110-163 107-157 (248)
206 PLN03190 aminophospholipid tra 85.3 12 0.00027 42.9 13.2 40 108-147 723-762 (1178)
207 TIGR03351 PhnX-like phosphonat 85.1 1.5 3.3E-05 39.6 5.0 50 111-163 87-138 (220)
208 TIGR02253 CTE7 HAD superfamily 85.0 1.2 2.6E-05 40.3 4.3 50 110-162 93-142 (221)
209 PRK13288 pyrophosphatase PpaX; 84.6 1.7 3.6E-05 39.3 5.0 49 111-162 82-130 (214)
210 PF00702 Hydrolase: haloacid d 84.3 2.5 5.4E-05 37.6 6.0 43 109-154 125-167 (215)
211 TIGR01454 AHBA_synth_RP 3-amin 84.3 1.6 3.5E-05 39.1 4.7 49 110-161 74-122 (205)
212 TIGR01497 kdpB K+-transporting 84.1 12 0.00025 40.4 11.7 110 240-382 448-561 (675)
213 COG4850 Uncharacterized conser 84.0 7.1 0.00015 37.9 8.9 90 96-187 162-286 (373)
214 KOG2961|consensus 83.6 4 8.7E-05 35.3 6.4 62 94-155 42-112 (190)
215 PF06189 5-nucleotidase: 5'-nu 83.3 2.9 6.2E-05 39.3 5.9 61 97-157 123-216 (264)
216 PRK14010 potassium-transportin 83.0 16 0.00036 39.3 12.3 112 240-382 443-556 (673)
217 PRK14988 GMP/IMP nucleotidase; 82.4 1.8 4E-05 39.7 4.3 51 110-163 92-142 (224)
218 PLN03243 haloacid dehalogenase 82.3 2.1 4.5E-05 40.5 4.8 50 111-163 109-158 (260)
219 PRK10826 2-deoxyglucose-6-phos 82.2 2.4 5.1E-05 38.6 5.0 51 110-163 91-141 (222)
220 TIGR01449 PGP_bact 2-phosphogl 81.9 2.5 5.4E-05 37.9 5.0 49 110-161 84-132 (213)
221 COG3882 FkbH Predicted enzyme 81.6 2.4 5.3E-05 43.2 5.0 52 94-145 221-289 (574)
222 COG3700 AphA Acid phosphatase 81.5 1.3 2.8E-05 39.3 2.7 29 317-346 187-215 (237)
223 COG4087 Soluble P-type ATPase 81.4 8.9 0.00019 32.4 7.5 56 96-155 15-70 (152)
224 COG3700 AphA Acid phosphatase 81.3 2.8 6.2E-05 37.1 4.8 56 95-150 63-153 (237)
225 TIGR02252 DREG-2 REG-2-like, H 81.3 2 4.3E-05 38.4 4.1 49 111-163 105-153 (203)
226 TIGR01422 phosphonatase phosph 80.5 2.9 6.3E-05 38.9 5.1 43 109-154 97-139 (253)
227 KOG2134|consensus 79.7 1.4 3.1E-05 43.5 2.7 48 93-140 73-133 (422)
228 COG0546 Gph Predicted phosphat 79.6 3.7 8.1E-05 37.5 5.4 48 112-162 90-137 (220)
229 TIGR01517 ATPase-IIB_Ca plasma 79.6 12 0.00027 41.9 10.4 135 229-382 568-722 (941)
230 TIGR01657 P-ATPase-V P-type AT 79.2 20 0.00042 40.9 11.9 48 104-154 649-696 (1054)
231 TIGR01491 HAD-SF-IB-PSPlk HAD- 78.5 3.5 7.7E-05 36.4 4.8 42 110-154 79-120 (201)
232 PRK01122 potassium-transportin 78.4 26 0.00056 37.9 11.9 112 240-382 447-560 (679)
233 TIGR01672 AphA HAD superfamily 77.8 4.3 9.2E-05 37.9 5.2 71 85-155 51-159 (237)
234 TIGR01548 HAD-SF-IA-hyp1 haloa 77.7 4.2 9.2E-05 36.2 5.0 49 111-162 106-154 (197)
235 TIGR01509 HAD-SF-IA-v3 haloaci 77.4 3.8 8.2E-05 35.5 4.5 49 110-162 84-132 (183)
236 PRK13222 phosphoglycolate phos 77.2 5.4 0.00012 36.0 5.7 42 110-154 92-133 (226)
237 TIGR02009 PGMB-YQAB-SF beta-ph 77.0 3.3 7.2E-05 36.1 4.1 48 110-162 87-134 (185)
238 TIGR01512 ATPase-IB2_Cd heavy 77.0 11 0.00024 39.5 8.5 99 95-199 342-447 (536)
239 PLN02575 haloacid dehalogenase 76.7 3.5 7.5E-05 41.2 4.5 47 113-162 218-264 (381)
240 TIGR01524 ATPase-IIIB_Mg magne 75.7 21 0.00045 39.8 10.7 59 304-382 595-655 (867)
241 PLN02954 phosphoserine phospha 75.4 5.8 0.00013 35.9 5.4 41 111-154 84-124 (224)
242 PF01740 STAS: STAS domain; I 75.2 7.3 0.00016 31.4 5.4 55 95-154 48-102 (117)
243 PRK15122 magnesium-transportin 74.7 21 0.00045 40.0 10.4 133 229-382 539-690 (903)
244 PRK13225 phosphoglycolate phos 74.6 5.3 0.00011 38.0 5.0 39 113-154 144-182 (273)
245 PF12710 HAD: haloacid dehalog 74.3 3.6 7.8E-05 36.0 3.6 13 98-110 1-13 (192)
246 COG5083 SMP2 Uncharacterized p 73.5 8.4 0.00018 38.9 6.1 45 94-138 374-430 (580)
247 PRK13226 phosphoglycolate phos 73.2 6.5 0.00014 36.0 5.1 42 110-154 94-135 (229)
248 KOG4549|consensus 72.5 13 0.00029 31.1 6.1 57 96-154 19-85 (144)
249 TIGR00338 serB phosphoserine p 72.0 8.1 0.00018 34.8 5.4 41 111-154 85-125 (219)
250 TIGR02247 HAD-1A3-hyp Epoxide 71.7 4.3 9.4E-05 36.4 3.5 30 110-139 93-122 (211)
251 PRK13478 phosphonoacetaldehyde 71.0 7.2 0.00016 36.6 5.0 40 110-152 100-139 (267)
252 PRK09449 dUMP phosphatase; Pro 71.0 5 0.00011 36.3 3.8 50 110-163 94-143 (224)
253 KOG0203|consensus 70.6 26 0.00056 38.4 9.3 36 111-146 590-625 (1019)
254 PRK11033 zntA zinc/cadmium/mer 70.1 19 0.00041 39.4 8.5 98 94-198 547-649 (741)
255 TIGR01489 DKMTPPase-SF 2,3-dik 69.7 8.4 0.00018 33.5 4.9 42 110-154 71-112 (188)
256 TIGR01647 ATPase-IIIA_H plasma 69.6 38 0.00082 37.2 10.8 51 315-382 535-587 (755)
257 PRK13223 phosphoglycolate phos 69.2 7.6 0.00017 36.8 4.8 42 110-154 100-141 (272)
258 TIGR01990 bPGM beta-phosphoglu 68.7 8.2 0.00018 33.5 4.6 48 111-163 87-134 (185)
259 COG0474 MgtA Cation transport 68.6 31 0.00067 38.7 10.0 35 110-144 546-580 (917)
260 PRK06698 bifunctional 5'-methy 67.8 7.8 0.00017 39.6 4.8 46 113-161 332-377 (459)
261 PRK09552 mtnX 2-hydroxy-3-keto 67.7 6.1 0.00013 35.9 3.6 28 110-137 73-100 (219)
262 PRK10517 magnesium-transportin 67.7 30 0.00066 38.7 9.7 51 315-382 638-690 (902)
263 TIGR01544 HAD-SF-IE haloacid d 67.5 12 0.00025 35.9 5.5 42 110-154 120-161 (277)
264 TIGR02254 YjjG/YfnB HAD superf 67.1 8.5 0.00018 34.6 4.5 50 110-163 96-145 (224)
265 COG2217 ZntA Cation transport 66.3 25 0.00055 38.2 8.4 84 97-186 519-607 (713)
266 TIGR01488 HAD-SF-IB Haloacid D 65.1 15 0.00031 31.7 5.4 41 111-154 73-113 (177)
267 PF04312 DUF460: Protein of un 65.0 19 0.00042 30.5 5.7 55 97-154 45-102 (138)
268 TIGR01490 HAD-SF-IB-hyp1 HAD-s 64.3 16 0.00034 32.4 5.6 41 111-154 87-127 (202)
269 PLN02940 riboflavin kinase 64.0 9.6 0.00021 38.1 4.5 88 110-201 92-191 (382)
270 cd07041 STAS_RsbR_RsbS_like Su 63.6 26 0.00057 27.7 6.3 58 93-155 39-96 (109)
271 TIGR01549 HAD-SF-IA-v1 haloaci 63.1 9.5 0.00021 32.2 3.8 37 110-146 63-99 (154)
272 PRK09456 ?-D-glucose-1-phospha 60.4 13 0.00028 33.1 4.3 27 111-137 84-110 (199)
273 COG0560 SerB Phosphoserine pho 60.2 18 0.00038 33.1 5.2 41 111-155 77-118 (212)
274 KOG0202|consensus 60.1 51 0.0011 36.3 9.1 43 110-155 583-625 (972)
275 PRK08508 biotin synthase; Prov 59.6 1.6E+02 0.0035 27.9 15.4 135 84-258 41-183 (279)
276 PLN02779 haloacid dehalogenase 59.6 10 0.00022 36.2 3.7 38 111-151 144-181 (286)
277 PLN02177 glycerol-3-phosphate 58.0 6.1 0.00013 41.0 1.9 20 95-114 22-41 (497)
278 TIGR01658 EYA-cons_domain eyes 57.4 24 0.00053 33.0 5.5 48 294-344 212-259 (274)
279 TIGR01691 enolase-ppase 2,3-di 56.7 11 0.00025 34.5 3.3 27 111-137 95-121 (220)
280 PRK10671 copA copper exporting 56.1 80 0.0017 35.0 10.3 101 94-199 629-734 (834)
281 TIGR03333 salvage_mtnX 2-hydro 56.0 13 0.00029 33.5 3.6 27 110-136 69-95 (214)
282 TIGR01452 PGP_euk phosphoglyco 55.5 55 0.0012 30.9 8.0 89 237-339 17-108 (279)
283 TIGR00377 ant_ant_sig anti-ant 55.1 56 0.0012 25.5 6.8 56 94-154 42-97 (108)
284 TIGR02137 HSK-PSP phosphoserin 55.1 24 0.00052 31.9 5.1 41 110-154 67-107 (203)
285 TIGR02886 spore_II_AA anti-sig 54.5 45 0.00097 26.2 6.1 56 94-154 38-93 (106)
286 KOG2914|consensus 54.1 22 0.00048 32.8 4.7 43 107-149 88-130 (222)
287 PRK13582 thrH phosphoserine ph 53.2 26 0.00057 31.0 5.1 42 109-154 66-107 (205)
288 TIGR01522 ATPase-IIA2_Ca golgi 51.8 34 0.00073 38.2 6.6 59 94-155 502-569 (884)
289 PF13344 Hydrolase_6: Haloacid 51.7 32 0.00069 27.3 4.8 30 236-265 12-42 (101)
290 COG4996 Predicted phosphatase 51.7 15 0.00033 31.0 2.9 76 238-323 41-125 (164)
291 cd07043 STAS_anti-anti-sigma_f 51.6 54 0.0012 24.9 6.1 55 95-154 38-92 (99)
292 PRK01122 potassium-transportin 50.6 17 0.00037 39.3 3.9 58 94-154 424-485 (679)
293 PLN02499 glycerol-3-phosphate 49.9 11 0.00024 38.8 2.2 21 94-114 7-27 (498)
294 PRK14010 potassium-transportin 49.2 18 0.0004 39.0 3.8 57 95-154 421-481 (673)
295 PLN02811 hydrolase 49.2 19 0.00042 32.5 3.6 28 110-137 77-104 (220)
296 COG1419 FlhF Flagellar GTP-bin 49.1 37 0.00081 34.2 5.7 76 47-135 298-373 (407)
297 TIGR01497 kdpB K+-transporting 49.1 33 0.00072 37.1 5.7 102 94-200 425-531 (675)
298 KOG0207|consensus 49.0 81 0.0018 35.0 8.5 104 93-201 701-811 (951)
299 PRK11590 hypothetical protein; 48.8 34 0.00073 30.8 5.1 40 111-153 95-135 (211)
300 COG1011 Predicted hydrolase (H 47.8 26 0.00057 31.4 4.3 52 110-165 98-149 (229)
301 TIGR01684 viral_ppase viral ph 47.1 4.4 9.5E-05 39.0 -1.1 58 240-301 148-206 (301)
302 COG0731 Fe-S oxidoreductases [ 47.0 35 0.00077 32.9 5.0 87 94-195 79-166 (296)
303 PRK15108 biotin synthase; Prov 46.7 2.3E+02 0.005 27.8 11.0 40 112-154 109-148 (345)
304 TIGR02244 HAD-IG-Ncltidse HAD 45.8 23 0.0005 35.0 3.6 25 112-136 185-209 (343)
305 cd06844 STAS Sulphate Transpor 45.0 69 0.0015 24.9 5.8 56 94-154 38-93 (100)
306 TIGR01647 ATPase-IIIA_H plasma 44.8 23 0.0005 38.8 3.9 44 108-154 439-482 (755)
307 PRK08238 hypothetical protein; 43.9 46 0.001 34.4 5.7 38 113-153 74-111 (479)
308 COG0647 NagD Predicted sugar p 43.8 1.1E+02 0.0024 29.1 7.8 92 235-339 21-114 (269)
309 PLN02919 haloacid dehalogenase 43.6 34 0.00074 39.1 5.0 86 113-201 163-259 (1057)
310 KOG3120|consensus 42.5 68 0.0015 29.7 5.8 35 311-346 179-214 (256)
311 PRK11133 serB phosphoserine ph 42.4 39 0.00086 32.9 4.7 39 113-154 183-221 (322)
312 PRK14607 bifunctional glutamin 41.7 1.3E+02 0.0029 31.5 8.8 57 99-155 268-324 (534)
313 COG3785 Uncharacterized conser 41.1 16 0.00035 29.3 1.4 38 90-127 23-60 (116)
314 KOG0206|consensus 40.4 1.1E+02 0.0023 35.2 8.2 27 110-136 650-676 (1151)
315 PF13433 Peripla_BP_5: Peripla 40.3 3.2E+02 0.0069 27.2 10.6 64 123-189 64-145 (363)
316 TIGR01545 YfhB_g-proteo haloac 40.1 32 0.00069 31.2 3.5 26 111-136 94-120 (210)
317 KOG2469|consensus 39.8 15 0.00033 36.7 1.3 53 295-347 285-338 (424)
318 PF06117 DUF957: Enterobacteri 39.4 19 0.0004 26.2 1.4 30 96-125 25-54 (65)
319 COG0263 ProB Glutamate 5-kinas 39.3 3.4E+02 0.0074 27.0 10.4 129 112-291 29-165 (369)
320 TIGR01993 Pyr-5-nucltdase pyri 38.4 38 0.00082 29.5 3.6 48 110-163 83-130 (184)
321 TIGR01517 ATPase-IIB_Ca plasma 36.6 39 0.00085 38.0 4.2 48 104-154 572-619 (941)
322 COG1366 SpoIIAA Anti-anti-sigm 36.4 1.1E+02 0.0023 24.7 5.8 56 94-154 43-98 (117)
323 TIGR01524 ATPase-IIIB_Mg magne 36.2 37 0.00081 37.8 3.9 43 109-154 513-555 (867)
324 KOG3085|consensus 36.0 85 0.0018 29.3 5.6 66 94-165 98-163 (237)
325 PRK14129 heat shock protein Hs 35.6 25 0.00053 28.3 1.7 43 92-135 16-58 (105)
326 PRK15122 magnesium-transportin 35.5 36 0.00078 38.2 3.6 43 109-154 548-590 (903)
327 PRK10725 fructose-1-P/6-phosph 35.2 58 0.0013 28.2 4.3 50 109-163 86-135 (188)
328 TIGR01245 trpD anthranilate ph 35.2 1.8E+02 0.004 28.3 8.2 57 99-155 71-127 (330)
329 PRK00188 trpD anthranilate pho 33.7 2.3E+02 0.0049 27.8 8.6 71 99-174 75-145 (339)
330 PRK10517 magnesium-transportin 33.6 36 0.00079 38.1 3.3 43 109-154 548-590 (902)
331 PF12694 MoCo_carrier: Putativ 33.4 37 0.00081 29.1 2.5 35 99-133 61-96 (145)
332 COG2216 KdpB High-affinity K+ 33.3 2.7E+02 0.0059 29.2 9.0 81 238-335 447-529 (681)
333 TIGR01494 ATPase_P-type ATPase 32.5 48 0.001 34.2 3.8 54 94-147 326-383 (499)
334 TIGR01116 ATPase-IIA1_Ca sarco 32.2 1E+02 0.0022 34.6 6.5 42 110-154 536-577 (917)
335 smart00775 LNS2 LNS2 domain. T 30.9 2.7E+02 0.0059 23.8 7.7 20 318-338 123-142 (157)
336 COG2897 SseA Rhodanese-related 30.8 91 0.002 29.9 5.0 48 296-344 71-124 (285)
337 PF00532 Peripla_BP_1: Peripla 30.5 3E+02 0.0064 25.8 8.6 70 118-199 70-151 (279)
338 PRK10563 6-phosphogluconate ph 30.5 70 0.0015 28.6 4.1 40 110-155 87-126 (221)
339 PRK12360 4-hydroxy-3-methylbut 29.9 1.7E+02 0.0037 28.1 6.7 111 230-352 159-271 (281)
340 PF07075 DUF1343: Protein of u 29.2 68 0.0015 31.9 4.0 46 89-134 73-118 (365)
341 KOG1615|consensus 28.8 1.2E+02 0.0027 27.5 5.1 23 113-135 90-112 (227)
342 PLN02389 biotin synthase 28.8 4.5E+02 0.0098 26.3 9.8 41 112-155 151-191 (379)
343 PF06941 NT5C: 5' nucleotidase 28.6 88 0.0019 27.6 4.4 114 235-381 70-185 (191)
344 cd00733 GlyRS_alpha_core Class 28.2 58 0.0013 30.6 3.0 44 295-338 79-128 (279)
345 PRK06256 biotin synthase; Vali 28.1 5.5E+02 0.012 24.7 11.9 30 230-261 207-236 (336)
346 TIGR03820 lys_2_3_AblA lysine- 28.1 2.3E+02 0.005 28.8 7.6 66 84-153 204-277 (417)
347 PRK09348 glyQ glycyl-tRNA synt 28.1 58 0.0013 30.6 3.1 44 295-338 83-132 (283)
348 cd01445 TST_Repeats Thiosulfat 27.5 1.9E+02 0.0041 24.2 6.0 49 296-344 76-131 (138)
349 PHA02597 30.2 hypothetical pro 27.4 75 0.0016 27.9 3.7 32 108-140 71-102 (197)
350 PRK00208 thiG thiazole synthas 27.3 2.1E+02 0.0047 26.8 6.6 103 235-347 101-209 (250)
351 COG5663 Uncharacterized conser 27.0 59 0.0013 28.7 2.7 39 306-348 129-167 (194)
352 TIGR01668 YqeG_hyp_ppase HAD s 26.7 93 0.002 27.0 4.1 29 235-263 40-69 (170)
353 COG3727 Vsr DNA G:T-mismatch r 26.5 1.6E+02 0.0035 24.9 5.1 20 91-111 53-72 (150)
354 PRK05301 pyrroloquinoline quin 26.0 2.5E+02 0.0055 27.7 7.5 72 83-154 102-184 (378)
355 COG4464 CapC Capsular polysacc 26.0 5.4E+02 0.012 23.9 9.3 126 97-267 7-142 (254)
356 PRK10748 flavin mononucleotide 25.9 60 0.0013 29.8 2.8 28 110-138 112-139 (238)
357 KOG0210|consensus 25.8 54 0.0012 35.4 2.7 51 315-381 782-832 (1051)
358 PRK11660 putative transporter; 25.4 2.5E+02 0.0054 29.7 7.7 71 92-168 488-560 (568)
359 PRK05642 DNA replication initi 25.2 1E+02 0.0022 28.4 4.2 78 52-137 61-140 (234)
360 TIGR02329 propionate_PrpR prop 25.0 8.2E+02 0.018 25.6 12.4 26 317-344 147-172 (526)
361 PRK09522 bifunctional glutamin 24.9 6.3E+02 0.014 26.5 10.4 57 99-155 273-329 (531)
362 COG2216 KdpB High-affinity K+ 24.8 96 0.0021 32.4 4.1 48 104-154 440-487 (681)
363 COG0547 TrpD Anthranilate phos 24.7 4.6E+02 0.01 25.8 8.8 130 100-251 78-213 (338)
364 PRK10076 pyruvate formate lyas 24.7 1.5E+02 0.0032 27.1 5.2 64 84-148 20-87 (213)
365 cd08539 SAM_PNT-ESE-3-like Ste 24.6 34 0.00074 25.8 0.7 30 21-50 41-70 (74)
366 PRK06731 flhF flagellar biosyn 24.6 2.4E+02 0.0053 26.7 6.7 47 86-135 199-246 (270)
367 PRK11557 putative DNA-binding 24.5 1.7E+02 0.0037 27.3 5.8 31 113-143 188-218 (278)
368 TIGR00388 glyQ glycyl-tRNA syn 24.5 75 0.0016 30.0 3.1 44 295-338 80-129 (293)
369 PRK11303 DNA-binding transcrip 24.2 6E+02 0.013 23.8 13.4 39 303-342 253-292 (328)
370 COG5663 Uncharacterized conser 24.0 52 0.0011 29.1 1.9 28 97-124 8-35 (194)
371 COG3882 FkbH Predicted enzyme 23.6 2.1E+02 0.0044 29.8 6.2 93 236-335 253-347 (574)
372 cd01766 Ufm1 Urm1-like ubiquit 23.3 1.1E+02 0.0023 23.1 3.1 46 296-344 25-70 (82)
373 PTZ00124 adenosine deaminase; 23.3 7.1E+02 0.015 24.7 10.0 37 96-136 192-228 (362)
374 PRK01395 V-type ATP synthase s 23.2 90 0.002 25.1 3.0 28 315-344 4-31 (104)
375 COG4229 Predicted enolase-phos 23.1 1.2E+02 0.0027 27.2 4.0 27 111-137 103-129 (229)
376 PF03709 OKR_DC_1_N: Orn/Lys/A 22.6 1.5E+02 0.0033 24.0 4.3 37 93-135 37-75 (115)
377 COG1167 ARO8 Transcriptional r 22.6 8.3E+02 0.018 24.9 12.8 63 141-203 138-206 (459)
378 cd07042 STAS_SulP_like_sulfate 22.4 2.6E+02 0.0056 21.2 5.6 55 95-154 41-95 (107)
379 KOG3107|consensus 22.3 82 0.0018 31.4 3.0 47 294-344 407-453 (468)
380 PF02571 CbiJ: Precorrin-6x re 22.3 1.3E+02 0.0028 28.2 4.3 17 367-383 233-249 (249)
381 PF08934 Rb_C: Rb C-terminal d 22.1 82 0.0018 26.8 2.6 41 46-105 71-111 (155)
382 TIGR00815 sulP high affinity s 22.1 1.5E+02 0.0032 31.2 5.3 55 95-154 494-548 (563)
383 TIGR03470 HpnH hopanoid biosyn 21.8 1.8E+02 0.004 28.1 5.5 61 94-154 123-193 (318)
384 TIGR00213 GmhB_yaeD D,D-heptos 21.8 74 0.0016 27.6 2.5 25 240-264 28-53 (176)
385 TIGR01681 HAD-SF-IIIC HAD-supe 21.5 92 0.002 25.6 2.9 87 238-333 29-126 (128)
386 PHA02530 pseT polynucleotide k 21.4 6.8E+02 0.015 23.4 9.5 31 236-266 185-216 (300)
387 PRK14086 dnaA chromosomal repl 21.2 1.8E+02 0.004 31.1 5.6 101 49-149 331-432 (617)
388 PRK08116 hypothetical protein; 21.1 4.3E+02 0.0094 24.8 7.7 58 87-147 171-228 (268)
389 PRK06769 hypothetical protein; 20.8 78 0.0017 27.5 2.4 25 240-264 30-55 (173)
390 TIGR01664 DNA-3'-Pase DNA 3'-p 20.5 84 0.0018 27.3 2.5 26 239-264 43-69 (166)
391 cd06591 GH31_xylosidase_XylS X 20.3 2.2E+02 0.0047 27.6 5.6 41 95-135 40-87 (319)
392 TIGR01656 Histidinol-ppas hist 20.2 86 0.0019 26.3 2.5 25 240-264 29-54 (147)
No 1
>KOG2882|consensus
Probab=100.00 E-value=3e-46 Score=346.03 Aligned_cols=290 Identities=52% Similarity=0.856 Sum_probs=264.2
Q ss_pred hhHHHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC-CCcCcccchH
Q psy7233 86 DKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN-AEPNEIIGTA 164 (383)
Q Consensus 86 ~~~~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~-i~~~~i~~s~ 164 (383)
++..+++..|++|+||+|||||.+..++||+.++++.|++.|+.+.++|||+.++++++.++++++|+. +..++|++++
T Consensus 13 ~~~~e~l~~~DtfifDcDGVlW~g~~~ipGs~e~l~~L~~~gK~i~fvTNNStksr~~y~kK~~~lG~~~v~e~~i~ssa 92 (306)
T KOG2882|consen 13 EEARELLDSFDTFIFDCDGVLWLGEKPIPGSPEALNLLKSLGKQIIFVTNNSTKSREQYMKKFAKLGFNSVKEENIFSSA 92 (306)
T ss_pred HHHHHHHhhcCEEEEcCCcceeecCCCCCChHHHHHHHHHcCCcEEEEeCCCcchHHHHHHHHHHhCccccCcccccChH
Confidence 677889999999999999999999999999999999999999999999999999999999999999999 9999999999
Q ss_pred HHHHHHHHhcCC-CCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhH
Q psy7233 165 YLAAQYLKKHLD-PKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKL 243 (383)
Q Consensus 165 ~~~~~~l~~~~~-~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l 243 (383)
.+.++|+.+. . .++++|++|++++.+++++.|++..+.+++.... -...+.+.....++.+.+|++|++.+++|.++
T Consensus 93 ~~~a~ylk~~-~~~~k~Vyvig~~gi~~eL~~aG~~~~g~~~~~~~~-~~~~~~~~~~~~d~~VgAVvvg~D~hfsy~KL 170 (306)
T KOG2882|consen 93 YAIADYLKKR-KPFGKKVYVIGEEGIREELDEAGFEYFGGGPDGKDT-DGAKSFVLSIGLDPDVGAVVVGYDEHFSYPKL 170 (306)
T ss_pred HHHHHHHHHh-CcCCCeEEEecchhhhHHHHHcCceeecCCCCcccc-cccccchhhcCCCCCCCEEEEecccccCHHHH
Confidence 9999999888 5 6789999999999999999999988777665432 01112333444577799999999999999999
Q ss_pred HHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q psy7233 244 MKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDR 323 (383)
Q Consensus 244 ~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs 323 (383)
..++.+|++++..+++||.|...|...+..++|.|+++..+..++++++...|||++.+++.+.++.++.|++++||||+
T Consensus 171 ~kA~~yLqnP~clflatn~D~~~p~~~~~~ipG~G~~v~av~~~t~R~P~v~GKP~~~m~~~l~~~~~i~psRt~mvGDR 250 (306)
T KOG2882|consen 171 MKALNYLQNPGCLFLATNRDATTPPTPGVEIPGAGSFVAAVKFATGRQPIVLGKPSTFMFEYLLEKFNIDPSRTCMVGDR 250 (306)
T ss_pred HHHHHHhCCCCcEEEeccCccccCCCCCeeccCCccHHHHHHHHhcCCCeecCCCCHHHHHHHHHHcCCCcceEEEEccc
Confidence 99999999999999999999988866777999999999999999999999999999999999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 324 GNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 324 ~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
+.+||.-|+++|++|++|.+|.+..++....+ ..+...|||+++++.++.+.++
T Consensus 251 L~TDIlFG~~~G~~TLLvltGv~~led~~~~~-----~~~~~~PDyy~~~l~d~~~~~~ 304 (306)
T KOG2882|consen 251 LDTDILFGKNCGFKTLLVLSGVTTLEDILEAQ-----GDNKMVPDYYADSLGDLLPLLN 304 (306)
T ss_pred chhhhhHhhccCcceEEEecCcCcHHHHHhcc-----cccCCCCchHHhhHHHHhhhcc
Confidence 99999999999999999999999999888753 2357789999999999988764
No 2
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.4e-44 Score=338.24 Aligned_cols=263 Identities=37% Similarity=0.583 Sum_probs=243.2
Q ss_pred HhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHh-cCCCCCcCcccchHHHHH
Q psy7233 90 DFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKH-LGFNAEPNEIIGTAYLAA 168 (383)
Q Consensus 90 ~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~-lG~~i~~~~i~~s~~~~~ 168 (383)
+++++|++++||+||||+++.+++|+|.++++.|+++|++++++|||++++++.+.++|+. .|.+..+++|++|+.+.+
T Consensus 3 ~~~~~y~~~l~DlDGvl~~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~~~~~~L~~~~~~~~~~~~i~TS~~at~ 82 (269)
T COG0647 3 DVMDKYDGFLFDLDGVLYRGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSREVVAARLSSLGGVDVTPDDIVTSGDATA 82 (269)
T ss_pred chhhhcCEEEEcCcCceEeCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHHHHHHHHHhhcCCCCCHHHeecHHHHHH
Confidence 4678899999999999999999999999999999999999999999999999999999999 778899999999999999
Q ss_pred HHHHhcCCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHHH
Q psy7233 169 QYLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAAC 248 (383)
Q Consensus 169 ~~l~~~~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l~ 248 (383)
+|+.+. .+.+++|++|++++.+++...|+....... ...+++|++|.++.+.|+++.+++.
T Consensus 83 ~~l~~~-~~~~kv~viG~~~l~~~l~~~G~~~~~~~~------------------~~~~d~Vv~g~d~~~~~e~l~~a~~ 143 (269)
T COG0647 83 DYLAKQ-KPGKKVYVIGEEGLKEELEGAGFELVDEEE------------------PARVDAVVVGLDRTLTYEKLAEALL 143 (269)
T ss_pred HHHHhh-CCCCEEEEECCcchHHHHHhCCcEEeccCC------------------CCcccEEEEecCCCCCHHHHHHHHH
Confidence 999998 667899999999999999999998763210 1226899999999999999999999
Q ss_pred HhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhH
Q psy7233 249 YLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDI 328 (383)
Q Consensus 249 ~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI 328 (383)
.+.+ |.++|+||+|..+|.+.+ ..++.|++...++.+++.++...|||++.+|+.|++.+|..+++++||||++.+||
T Consensus 144 ~i~~-g~~fI~tNpD~~~p~~~g-~~pgaGai~~~~~~~tg~~~~~~GKP~~~i~~~al~~~~~~~~~~~mVGD~~~TDI 221 (269)
T COG0647 144 AIAA-GAPFIATNPDLTVPTERG-LRPGAGAIAALLEQATGREPTVIGKPSPAIYEAALEKLGLDRSEVLMVGDRLDTDI 221 (269)
T ss_pred HHHc-CCcEEEeCCCccccCCCC-CccCcHHHHHHHHHhhCCcccccCCCCHHHHHHHHHHhCCCcccEEEEcCCchhhH
Confidence 9986 699999999999998888 89999999999999999999899999999999999999999999999999999999
Q ss_pred HHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 329 RLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 329 ~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
.+|+++|++|++|.+|.++.+++... ...|+|+++|+.++...+.
T Consensus 222 ~~a~~~G~~t~LV~TGv~~~~~~~~~---------~~~p~~v~~sl~~~~~~~~ 266 (269)
T COG0647 222 LGAKAAGLDTLLVLTGVSSAEDLDRA---------EVKPTYVVDSLAELITALK 266 (269)
T ss_pred HHHHHcCCCEEEEccCCCChhhhhhh---------ccCCcchHhhHHHHHhhhh
Confidence 99999999999999999988886653 4689999999999987764
No 3
>TIGR01457 HAD-SF-IIA-hyp2 HAD-superfamily subfamily IIA hydrolase, TIGR01457. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram positive (low-GC) bacteria. Sequences found in this model are annotated variously as related to NagD or 4-nitrophenyl phosphatase, and this hypothetical equivalog, of all of those within the Class IIA subfamily, is most closely related to the E. coli NagD enzyme and the PGP_euk equivalog (TIGR01452). However, there is presently no evidence that this hypothetical equivalog has the same function of either those.
Probab=100.00 E-value=3.4e-40 Score=309.73 Aligned_cols=249 Identities=30% Similarity=0.467 Sum_probs=227.5
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhc
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKH 174 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~ 174 (383)
||+++||+|||||++..++|++.+++++++++|++++++|||++++.+.+.+.++.+|+++..++|++++.+.++|+.+.
T Consensus 1 ~~~~~~D~DGtl~~~~~~i~~a~~~l~~l~~~g~~~~~~Tnn~~r~~~~~~~~l~~~g~~~~~~~iit~~~~~~~~l~~~ 80 (249)
T TIGR01457 1 YKGYLIDLDGTMYKGKERIPEAETFVHELQKRDIPYLFVTNNSTRTPESVAEMLASFDIPATLETVFTASMATADYMNDL 80 (249)
T ss_pred CCEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEeeHHHHHHHHHHhc
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred CCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHHHHhhCCC
Q psy7233 175 LDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPN 254 (383)
Q Consensus 175 ~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l~~L~~~g 254 (383)
...++++++|.+++.+.++..|+... .+.+++|++|++..++|+++..++..++ +|
T Consensus 81 -~~~~~v~~lg~~~l~~~l~~~g~~~~----------------------~~~~~~Vvvg~~~~~~y~~l~~a~~~l~-~g 136 (249)
T TIGR01457 81 -KLEKTVYVIGEEGLKEAIKEAGYVED----------------------KEKPDYVVVGLDRQIDYEKFATATLAIR-KG 136 (249)
T ss_pred -CCCCEEEEEcChhHHHHHHHcCCEec----------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH-CC
Confidence 66788999999999999999988753 2346789999999999999999999996 58
Q ss_pred CEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHc
Q psy7233 255 TLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNN 334 (383)
Q Consensus 255 ~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~a 334 (383)
.++++||+|..++...+ ..++.+.+...++.+.+.++...|||+|.+|+.+++++|++|++++||||++.+||.+|+++
T Consensus 137 ~~~i~tN~D~~~~~~~~-~~~~~G~~~~~i~~~~~~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~VGD~~~~Di~~a~~~ 215 (249)
T TIGR01457 137 AHFIGTNGDLAIPTERG-LLPGNGSLITVLEVATGVKPVYIGKPNAIIMEKAVEHLGTEREETLMVGDNYLTDIRAGIDA 215 (249)
T ss_pred CeEEEECCCCCCCCCCC-CCCCcHHHHHHHHHHhCCCccccCCChHHHHHHHHHHcCCCcccEEEECCCchhhHHHHHHc
Confidence 99999999999996555 67899999999999999888889999999999999999999999999999977999999999
Q ss_pred CCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhH
Q psy7233 335 GFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDM 377 (383)
Q Consensus 335 Gl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL 377 (383)
|+++++|.+|.+..+++... ...||++++++.++
T Consensus 216 G~~~v~v~~G~~~~~~~~~~---------~~~pd~~v~~l~~~ 249 (249)
T TIGR01457 216 GIDTLLVHTGVTKAEEVAGL---------PIAPTHVVSSLAEW 249 (249)
T ss_pred CCcEEEEcCCCCCHHHHhcC---------CCCCCEEeCChhhC
Confidence 99999999998887765542 34799999999874
No 4
>PRK10444 UMP phosphatase; Provisional
Probab=100.00 E-value=4.9e-40 Score=307.94 Aligned_cols=245 Identities=27% Similarity=0.450 Sum_probs=224.7
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhc
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKH 174 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~ 174 (383)
+|+|+||+|||||++..++|++.+++++++++|++++++||+++++..++.++|..+|+++..+++++++.++++|+.+.
T Consensus 1 ~~~v~~DlDGtL~~~~~~~p~a~~~l~~L~~~g~~~~~~Tn~~~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~L~~~ 80 (248)
T PRK10444 1 IKNVICDIDGVLMHDNVAVPGAAEFLHRILDKGLPLVLLTNYPSQTGQDLANRFATAGVDVPDSVFYTSAMATADFLRRQ 80 (248)
T ss_pred CcEEEEeCCCceEeCCeeCccHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCCHhhEecHHHHHHHHHHhC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHHHHhhCCC
Q psy7233 175 LDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPN 254 (383)
Q Consensus 175 ~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l~~L~~~g 254 (383)
.+++++++|.+++.+++++.|++.. .+.+++|++|++..++|..+..+...++ +|
T Consensus 81 --~~~~v~~~g~~~l~~~l~~~g~~~~----------------------~~~~~~Vvvg~~~~~~~~~l~~a~~~l~-~g 135 (248)
T PRK10444 81 --EGKKAYVIGEGALIHELYKAGFTIT----------------------DINPDFVIVGETRSYNWDMMHKAAYFVA-NG 135 (248)
T ss_pred --CCCEEEEEcCHHHHHHHHHCcCEec----------------------CCCCCEEEEeCCCCCCHHHHHHHHHHHH-CC
Confidence 4567999999999999999888754 2346789999999999999999998886 59
Q ss_pred CEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHc
Q psy7233 255 TLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNN 334 (383)
Q Consensus 255 ~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~a 334 (383)
.+++++|+|...+ + ..++.|.++..++.++++++...|||+|.+|+.+++++|++|++++||||++.+||.+|+++
T Consensus 136 ~~~i~~n~D~~~~---g-~~~~~G~~~~~l~~~~g~~~~~~gKP~~~~~~~~~~~~~~~~~~~v~IGD~~~tDi~~A~~~ 211 (248)
T PRK10444 136 ARFIATNPDTHGR---G-FYPACGALCAGIEKISGRKPFYVGKPSPWIIRAALNKMQAHSEETVIVGDNLRTDILAGFQA 211 (248)
T ss_pred CEEEEECCCCCCC---C-CcCcHHHHHHHHHHHhCCCccccCCCCHHHHHHHHHHcCCCcccEEEECCCcHHHHHHHHHc
Confidence 9999999999644 4 67899999999999999988889999999999999999999999999999977999999999
Q ss_pred CCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhH
Q psy7233 335 GFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDM 377 (383)
Q Consensus 335 Gl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL 377 (383)
|+++++|.+|.++.+++... ...||++++++.++
T Consensus 212 G~~~vlV~~G~~~~~~l~~~---------~~~pd~~~~sl~el 245 (248)
T PRK10444 212 GLETILVLSGVSTLDDIDSM---------PFRPSWIYPSVADI 245 (248)
T ss_pred CCCEEEECCCCCCHHHHhcC---------CCCCCEEECCHHHh
Confidence 99999999999988877642 45899999999998
No 5
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=100.00 E-value=6.8e-40 Score=312.74 Aligned_cols=279 Identities=39% Similarity=0.649 Sum_probs=233.3
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHh
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKK 173 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~ 173 (383)
+|++|+||+|||||++..++|++.++|++++++|++++++|||+.+++.++...|+.+|++...++++++...++.|+.+
T Consensus 1 ~~~~~~~D~DGtl~~~~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~~~~~~l~~~G~~~~~~~i~ts~~~~~~~l~~ 80 (279)
T TIGR01452 1 RAQGFIFDCDGVLWLGERVVPGAPELLDRLARAGKAALFVTNNSTKSRAEYALKFARLGFNGLAEQLFSSALCAARLLRQ 80 (279)
T ss_pred CccEEEEeCCCceEcCCeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHHHHHHHHHHcCCCCChhhEecHHHHHHHHHHh
Confidence 47999999999999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred cCCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHHHHhhCC
Q psy7233 174 HLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNP 253 (383)
Q Consensus 174 ~~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l~~L~~~ 253 (383)
...++++++++|.+++.+.+++.|+.......+.-.. ...+........+++++|++|++..++|+++.+++..|+++
T Consensus 81 ~~~~~~~v~~iG~~~~~~~l~~~g~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~Vvv~~d~~~~y~~i~~~l~~L~~~ 158 (279)
T TIGR01452 81 PPDAPKAVYVIGEEGLRAELDAAGIRLAGDPSAGDGA--APRGSGAFMKLEENVGAVVVGYDEHFSYAKLREACAHLREP 158 (279)
T ss_pred hCcCCCEEEEEcCHHHHHHHHHCCCEEecCccccccc--chhhcccccccCCCCCEEEEecCCCCCHHHHHHHHHHHhcC
Confidence 4134678999999999999999999865321110000 00011111223457899999999999999999999999988
Q ss_pred CCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHH
Q psy7233 254 NTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYN 333 (383)
Q Consensus 254 g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~ 333 (383)
|.++++||++...+.......++.+.++..+..+++.++...|||+|.+|..+++++|++|++++||||++.+||.+|++
T Consensus 159 g~~~i~Tn~d~~~~~~~~~~~~~~g~~~~~i~~~~g~~~~~~gKP~p~~~~~~~~~~~~~~~~~lmIGD~~~tDI~~A~~ 238 (279)
T TIGR01452 159 GCLFVATNRDPWHPLSDGSRTPGTGSLVAAIETASGRQPLVVGKPSPYMFECITENFSIDPARTLMVGDRLETDILFGHR 238 (279)
T ss_pred CCEEEEeCCCCCCCCcCCCcccChHHHHHHHHHHhCCceeccCCCCHHHHHHHHHHhCCChhhEEEECCChHHHHHHHHH
Confidence 99899999999777444445678888889998888888788999999999999999999999999999997899999999
Q ss_pred cCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhH
Q psy7233 334 NGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDM 377 (383)
Q Consensus 334 aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL 377 (383)
+|+++++|.||.+..+++..... .......||++++++.+|
T Consensus 239 aGi~si~V~~G~~~~~~l~~~~~---~~~~~~~Pd~~~~~l~~l 279 (279)
T TIGR01452 239 CGMTTVLVLSGVSRLEEAQEYLA---AGQHDLVPDYVVESLADL 279 (279)
T ss_pred cCCcEEEECCCCCCHHHHHhhhc---ccccCCCCCEEecccccC
Confidence 99999999999998888764210 001246899999999875
No 6
>PLN02645 phosphoglycolate phosphatase
Probab=100.00 E-value=9.8e-40 Score=316.11 Aligned_cols=289 Identities=38% Similarity=0.615 Sum_probs=243.4
Q ss_pred ChhhHHHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 84 SGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 84 ~~~~~~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
..+++.+++.+||+|+||+|||||++..++|++.+++++++++|++++++||+++++..++.++|+++|+++..++|+++
T Consensus 17 ~~~~~~~~~~~~~~~~~D~DGtl~~~~~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~~~~~~l~~lGi~~~~~~I~ts 96 (311)
T PLN02645 17 TLENADELIDSVETFIFDCDGVIWKGDKLIEGVPETLDMLRSMGKKLVFVTNNSTKSRAQYGKKFESLGLNVTEEEIFSS 96 (311)
T ss_pred CHHHHHHHHHhCCEEEEeCcCCeEeCCccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHHHHHHHHHHCCCCCChhhEeeh
Confidence 57788889999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhcCCC--CCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChh
Q psy7233 164 AYLAAQYLKKHLDP--KKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFP 241 (383)
Q Consensus 164 ~~~~~~~l~~~~~~--~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~ 241 (383)
......++.+. .. +++++++|.+++.+.++..|+.......+. ... ...+.....+..+.+++|++|++..++|.
T Consensus 97 ~~~~~~~l~~~-~~~~~~~V~viG~~~~~~~l~~~Gi~~~~g~~~~-~~~-~~~~~~~~~~~~~~i~aVvvg~d~~~~~~ 173 (311)
T PLN02645 97 SFAAAAYLKSI-NFPKDKKVYVIGEEGILEELELAGFQYLGGPEDG-DKK-IELKPGFLMEHDKDVGAVVVGFDRYINYY 173 (311)
T ss_pred HHHHHHHHHhh-ccCCCCEEEEEcCHHHHHHHHHCCCEEecCcccc-ccc-cccccccccccCCCCCEEEEecCCCCCHH
Confidence 99999999875 32 457999999999999999999865321110 000 00000000122355689999999999999
Q ss_pred hHHHHHHHhhC-CCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy7233 242 KLMKAACYLTN-PNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMI 320 (383)
Q Consensus 242 ~l~~~l~~L~~-~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~I 320 (383)
.+..+...++. +|..+++||+|..++.......++.+.++..+....+..+...|||+|.+|..+++++|+++++++||
T Consensus 174 ~l~~a~~~l~~~~g~~~i~tn~d~~~~~~~~~~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~a~~~~~~~~~~~~~V 253 (311)
T PLN02645 174 KIQYATLCIRENPGCLFIATNRDAVTHLTDAQEWAGAGSMVGAIKGSTEREPLVVGKPSTFMMDYLANKFGIEKSQICMV 253 (311)
T ss_pred HHHHHHHHHhcCCCCEEEEeCCCCCCCCCCCCCccchHHHHHHHHHHhCCCcccCCCChHHHHHHHHHHcCCCcccEEEE
Confidence 99999999974 79999999999977544454678899999999999988877789999999999999999999999999
Q ss_pred ecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 321 GDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 321 GDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
||++.+||.+|+++|+++++|.+|.++.+++.... ....||++++++.+|.+++.
T Consensus 254 GD~~~~Di~~A~~aG~~~ilV~~G~~~~~~~~~~~-------~~~~pd~~~~~~~~l~~~~~ 308 (311)
T PLN02645 254 GDRLDTDILFGQNGGCKTLLVLSGVTSESMLLSPE-------NKIQPDFYTSKISDFLTLKA 308 (311)
T ss_pred cCCcHHHHHHHHHcCCCEEEEcCCCCCHHHHHhcc-------CCCCCCEEECCHHHHHHHhh
Confidence 99977999999999999999999998877765421 13579999999999998764
No 7
>TIGR01458 HAD-SF-IIA-hyp3 HAD-superfamily subfamily IIA hydrolase, TIGR01458. This hypothetical equivalog is a member of the IIA subfamily (TIGR01460) of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. One sequence (GP|10716807) has been annotated as a "phospholysine phosphohistidine inorganic pyrophosphatase," probably in reference to studies on similarly described (but unsequenced) enzymes from bovine and rat tissues. However, the supporting information for this annotation has never been published.
Probab=100.00 E-value=8.4e-37 Score=287.98 Aligned_cols=249 Identities=22% Similarity=0.375 Sum_probs=215.3
Q ss_pred CCEEEEecCCceecCCc----cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHH
Q psy7233 95 FDTVLTDCDGVLWLENE----LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQY 170 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~----~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~ 170 (383)
+|+|+||+|||||++.. ++|++.+++++++++|++++++||+++++++++.+.|..+|+++.++++++++..+++|
T Consensus 1 ~k~i~~D~DGtl~~~~~~~~~~~~~a~~al~~l~~~G~~~~~~Tn~~~~~~~~~~~~l~~~g~~~~~~~i~ts~~~~~~~ 80 (257)
T TIGR01458 1 VKGVLLDISGVLYISDAKSGVAVPGSQEAVKRLRGASVKVRFVTNTTKESKQDLLERLQRLGFDISEDEVFTPAPAARQL 80 (257)
T ss_pred CCEEEEeCCCeEEeCCCcccCcCCCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHcCCCCCHHHeEcHHHHHHHH
Confidence 47999999999999877 99999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhcCCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccC-CCChhhHHHHHHH
Q psy7233 171 LKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDS-HISFPKLMKAACY 249 (383)
Q Consensus 171 l~~~~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~-~~~~~~l~~~l~~ 249 (383)
+.+. + .+++++|.+++.+.+. ++. ...+++|++|++. .++|+++.+++..
T Consensus 81 l~~~-~--~~~~~~g~~~~~~~~~--~~~------------------------~~~~~~Vv~g~~~~~~~y~~l~~a~~~ 131 (257)
T TIGR01458 81 LEEK-Q--LRPMLLVDDRVLPDFD--GID------------------------TSDPNCVVMGLAPEHFSYQILNQAFRL 131 (257)
T ss_pred HHhc-C--CCeEEEECccHHHHhc--cCC------------------------CCCCCEEEEecccCccCHHHHHHHHHH
Confidence 9885 3 4588889888877764 221 1234689999854 7999999999999
Q ss_pred hhCCCCE-EEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhH
Q psy7233 250 LTNPNTL-FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDI 328 (383)
Q Consensus 250 L~~~g~~-~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI 328 (383)
|++.+.+ +++||.+..++...+ ..++.+.+++.+..+.+..+...|||+|.+|+.+++++|++|++++||||++.+||
T Consensus 132 L~~~~~~~~iatn~~~~~~~~~~-~~~g~g~~~~~i~~~~~~~~~~~gKP~p~~~~~~~~~~~~~~~~~~~vGD~~~~Di 210 (257)
T TIGR01458 132 LLDGAKPLLIAIGKGRYYKRKDG-LALDVGPFVTALEYATDTKATVVGKPSKTFFLEALRATGCEPEEAVMIGDDCRDDV 210 (257)
T ss_pred HHcCCCCEEEEeCCCCCCcCCCC-CCCCchHHHHHHHHHhCCCceeecCCCHHHHHHHHHHhCCChhhEEEECCCcHHHH
Confidence 9876654 688899998886555 67899999999999888887778999999999999999999999999999977999
Q ss_pred HHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 329 RLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 329 ~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
.+|+++|+++++|.+|.+...+.+. ....|+++++++.++.+++.
T Consensus 211 ~~a~~~G~~~i~v~~G~~~~~~~~~---------~~~~pd~~~~sl~el~~~l~ 255 (257)
T TIGR01458 211 GGAQDCGMRGIQVRTGKYRPSDEEK---------INVPPDLTCDSLPHAVDLIL 255 (257)
T ss_pred HHHHHcCCeEEEECCCCCChHHhcc---------cCCCCCEEECCHHHHHHHHh
Confidence 9999999999999999765443322 13479999999999998764
No 8
>TIGR01456 CECR5 HAD-superfamily class IIA hydrolase, TIGR01456, CECR5. The Schizosaccharomyces pombe sequence (EGAD|138276) is annotated as "phosphatidyl synthase," however this is due entirely to a C-terminal region of the protein (outside the region of similarity of this model) which is highly homologous to a family of CDP-alcohol phosphatidyltransferases. (Thus, the annotation of GP|4226073 from C. elegans as similar to phosphatidyl synthase, is a mistake as this gene does not contain the C-terminal portion). The physical connection of the phosphatidyl synthase and the HAD-superfamily hydrolase domain in S. pombe may, however, be an important clue to the substrate for the hydrolases in this equivalog.
Probab=100.00 E-value=1.3e-34 Score=281.35 Aligned_cols=272 Identities=18% Similarity=0.190 Sum_probs=216.2
Q ss_pred EEEEecCCceecCCccChhHHHHHHHHHHc----CceEEEEcCCCCCCHHHHHHHH-HhcCCCCCcCcccchHHHHHHHH
Q psy7233 97 TVLTDCDGVLWLENELISGADQVMNSLKSL----GKKIFYVTNNSTKTREQLIVKL-KHLGFNAEPNEIIGTAYLAAQYL 171 (383)
Q Consensus 97 aViFDlDGTL~d~~~~~p~A~eal~~l~~~----Gi~v~ivTn~~~~~~~~~~~~L-~~lG~~i~~~~i~~s~~~~~~~l 171 (383)
+|+||+|||||++..++|+|.++++.+++. |+++.++||+++++.+++.+.| +.+|+++.+++++++...+..++
T Consensus 2 ~~ifD~DGvL~~g~~~i~ga~eal~~L~~~~~~~g~~~~flTNn~g~s~~~~~~~l~~~lG~~~~~~~i~~s~~~~~~ll 81 (321)
T TIGR01456 2 GFAFDIDGVLFRGKKPIAGASDALRRLNRNQGQLKIPYIFLTNGGGFSERARAEEISSLLGVDVSPLQVIQSHSPYKSLV 81 (321)
T ss_pred EEEEeCcCceECCccccHHHHHHHHHHhccccccCCCEEEEecCCCCCHHHHHHHHHHHcCCCCCHHHHHhhhHHHHHHH
Confidence 799999999999999999999999999998 9999999999999999999988 78999999999999988777676
Q ss_pred HhcCCCCCeEEEEeCcchHHHHHHcCCcccccCCC------CCCCCCCCcccc-c----cc--CCCCCccEEEEeccCCC
Q psy7233 172 KKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPD------VMIPGRDLKTDH-E----KL--NLDPHVGAVVVGFDSHI 238 (383)
Q Consensus 172 ~~~~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d------~~~~~~~~~~~~-~----~~--~~~~~~~~Vv~g~~~~~ 238 (383)
.+. .++++++|..++.+.++..|+.......| ....|+.+.+.. . .. ...+++++|+++.+...
T Consensus 82 ~~~---~~~v~viG~~~~~~~l~~~G~~~vv~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aVvv~~d~~~ 158 (321)
T TIGR01456 82 NKY---EKRILAVGTGSVRGVAEGYGFQNVVHQDEIVRYFRDIDPFSGMSDEQVREYSRDIPDLTTKRFDAVLVFNDPVD 158 (321)
T ss_pred HHc---CCceEEEeChHHHHHHHHcCCcccccHHHHHhcCCCCCcccccCHHHhhcccccccccCCCceeEEEEecCchH
Confidence 432 34789999999999999999884321001 000111111000 0 00 01247889999988776
Q ss_pred ChhhHHHHHHHhhCCC----------CEEEEecCCCCCCCCCCccccCcchHHHHHHH----hcCCCc--cccCCCCHHH
Q psy7233 239 SFPKLMKAACYLTNPN----------TLFVATNTDESFPMGPHVTVPGTGSMVAAVKT----GAQREP--VVIGKPSKLI 302 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g----------~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~----~~~~~~--~~~gKP~p~~ 302 (383)
.+.+++.+...+++.| .++++||+|..++...+..+++.|++...+.. +++..+ ...|||+|.+
T Consensus 159 ~~~~l~~~~~~l~~~g~~g~~~~~~~~~~i~~n~D~~~p~~~g~~~~g~Ga~~~~l~~~~~~~tg~~~~~~~~GKP~~~~ 238 (321)
T TIGR01456 159 WAADIQIISDALNSEGLPGEKSGKPSIPIYFSNQDLLWANEYKLNRFGQGAFRLLLERIYLELNGKPLQYYTLGKPTKLT 238 (321)
T ss_pred HhhhHHHHHHHHhCCCCcCCCCCCCCCCEEEeCCCEeeccCCCCceechHHHHHHHHHHHHHhcCCCcceEEcCCCChHH
Confidence 6677888988887632 68999999999997666447899999999988 456543 5689999999
Q ss_pred HHHHHHHc--------CC-----CCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccE
Q psy7233 303 GSYLIEKY--------NL-----NPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADY 369 (383)
Q Consensus 303 ~~~al~~l--------gi-----~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~ 369 (383)
|+.+++.+ +. ++++++||||++.+||.+|+++|+++++|.+|.+..++.. ....|++
T Consensus 239 ~~~a~~~l~~~~~~~~~~~~~~~~~~~~~mIGD~~~tDI~ga~~~G~~silV~tG~~~~~~~~----------~~~~p~~ 308 (321)
T TIGR01456 239 YDFAEDVLIDWEKRLSGTKPSTSPFHALYMVGDNPASDIIGAQNYGWFSCLVKTGVYNGGDDL----------KECKPTL 308 (321)
T ss_pred HHHHHHHHHHHHhhhccccccCCChheEEEEcCChhhhhhhHHhCCceEEEecccccCCCCCC----------CCCCCCE
Confidence 99999988 43 4579999999999999999999999999999976654421 1347999
Q ss_pred EeCCHhhHHHhh
Q psy7233 370 YLSSLGDMLPFL 381 (383)
Q Consensus 370 vi~sl~eL~~~l 381 (383)
+++|+.|+..++
T Consensus 309 vv~~l~e~~~~i 320 (321)
T TIGR01456 309 IVNDVFDAVTKI 320 (321)
T ss_pred EECCHHHHHHHh
Confidence 999999999875
No 9
>TIGR01460 HAD-SF-IIA Haloacid Dehalogenase Superfamily Class (subfamily) IIA. Many of the genes in this subfamily have been annotated as "pNPPase" "4-nitrophenyl phosphatase" or "NPPase". These all refer to the same activity versus a common lab test compound used to determine phosphatase activity. There is no evidence that this activity is physiologically relevant.
Probab=100.00 E-value=8.1e-34 Score=264.48 Aligned_cols=232 Identities=37% Similarity=0.595 Sum_probs=203.5
Q ss_pred EEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHh-cCCCCCcCcccchHHHHHHHHHhcCC
Q psy7233 98 VLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKH-LGFNAEPNEIIGTAYLAAQYLKKHLD 176 (383)
Q Consensus 98 ViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~-lG~~i~~~~i~~s~~~~~~~l~~~~~ 176 (383)
|+||+||||+++..++|+|.++++.++++|+++.++||+++++..++.++|.+ +|++++++++++++..+++|+.++ .
T Consensus 1 ~lfD~DGvL~~~~~~~~~a~e~i~~l~~~g~~~~~~tN~~~~~~~~~~~~l~~~~g~~~~~~~iits~~~~~~~l~~~-~ 79 (236)
T TIGR01460 1 FLFDIDGVLWLGHKPIPGAAEALNRLRAKGKPVVFLTNNSSRSEEDYAEKLSSLLGVDVSPDQIITSGSVTKDLLRQR-F 79 (236)
T ss_pred CEEeCcCccCcCCccCcCHHHHHHHHHHCCCeEEEEECCCCCCHHHHHHHHHHhcCCCCCHHHeeeHHHHHHHHHHHh-C
Confidence 58999999999999999999999999999999999999999999999999999 899999999999999999999986 5
Q ss_pred CCCeEEEEeCcchHHHHHHcCCcc--cccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHHHHhhCCC
Q psy7233 177 PKKKAYIVGSSGIADELNLAGIEN--FGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLTNPN 254 (383)
Q Consensus 177 ~~~~~~~ig~~~l~~~l~~~gi~~--~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l~~L~~~g 254 (383)
++++++++|.+++.++++..|++. .... + ..+..+.++.|+++.+..+.|..+..+...+++.+
T Consensus 80 ~~~~v~v~G~~~~~~~l~~~g~~~~~~~~~-~-------------~~~~~~~~~~vv~~~~~~~~~~~~~~a~~~l~~~~ 145 (236)
T TIGR01460 80 EGEKVYVIGVGELRESLEGLGFRNDFFDDI-D-------------HLAIEKIPAAVIVGEPSDFSYDELAKAAYLLAEGD 145 (236)
T ss_pred CCCEEEEECCHHHHHHHHHcCCcCcccCcc-c-------------ccccCCCCeEEEECCCCCcCHHHHHHHHHHHhCCC
Confidence 667899999999999999998862 1100 0 00113345788889999999999999888888644
Q ss_pred CEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcE-EEEecCchhhHHHHHH
Q psy7233 255 TLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERT-LMIGDRGNTDIRLGYN 333 (383)
Q Consensus 255 ~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~-l~IGDs~~~DI~~A~~ 333 (383)
.++++||+|..++...+...++.+.+++.+..+.+..+...+||+|.+|+.+++++|++++++ +||||++.+||.+|++
T Consensus 146 ~~~i~tN~d~~~~~~~g~~~~~~g~~~~~i~~~~g~~~~~~~KP~~~~~~~~~~~~~~~~~~~~~~IGD~~~~Di~~A~~ 225 (236)
T TIGR01460 146 VPFIAANRDDLVRLGDGRFRPGAGAIAAGIKELSGREPTVVGKPSPAIYRAALNLLQARPERRDVMVGDNLRTDILGAKN 225 (236)
T ss_pred CeEEEECCCCCCCCCCCcEeecchHHHHHHHHHhCceeeeecCCCHHHHHHHHHHhCCCCccceEEECCCcHHHHHHHHH
Confidence 999999999866655666788999999999999998877789999999999999999999997 9999996699999999
Q ss_pred cCCcEEEEcCC
Q psy7233 334 NGFQTLLVLTG 344 (383)
Q Consensus 334 aGl~tv~V~~G 344 (383)
+|+++++|.+|
T Consensus 226 ~G~~~i~v~~G 236 (236)
T TIGR01460 226 AGFDTLLVLTG 236 (236)
T ss_pred CCCcEEEEecC
Confidence 99999999886
No 10
>KOG3040|consensus
Probab=100.00 E-value=1.1e-33 Score=247.80 Aligned_cols=251 Identities=24% Similarity=0.385 Sum_probs=220.8
Q ss_pred cCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHH
Q psy7233 93 NSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLK 172 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~ 172 (383)
..++++++|+-|||+++..++|+|.+|++.|+.++.++-++||.+..+.+.+.++|.++||++++++|+++..++++|+.
T Consensus 5 ~~v~gvLlDlSGtLh~e~~avpga~eAl~rLr~~~~kVkFvTNttk~Sk~~l~~rL~rlgf~v~eeei~tsl~aa~~~~~ 84 (262)
T KOG3040|consen 5 RAVKGVLLDLSGTLHIEDAAVPGAVEALKRLRDQHVKVKFVTNTTKESKRNLHERLQRLGFDVSEEEIFTSLPAARQYLE 84 (262)
T ss_pred cccceEEEeccceEecccccCCCHHHHHHHHHhcCceEEEEecCcchhHHHHHHHHHHhCCCccHHHhcCccHHHHHHHH
Confidence 45799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEe-ccCCCChhhHHHHHHHhh
Q psy7233 173 KHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVG-FDSHISFPKLMKAACYLT 251 (383)
Q Consensus 173 ~~~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g-~~~~~~~~~l~~~l~~L~ 251 (383)
+. .. +.+++-.+..++.+.. +. ...+++||+| ..+.|+|+.+..+++.|.
T Consensus 85 ~~-~l--rP~l~v~d~a~~dF~g--id------------------------Ts~pn~VViglape~F~y~~ln~AFrvL~ 135 (262)
T KOG3040|consen 85 EN-QL--RPYLIVDDDALEDFDG--ID------------------------TSDPNCVVIGLAPEGFSYQRLNRAFRVLL 135 (262)
T ss_pred hc-CC--CceEEEcccchhhCCC--cc------------------------CCCCCeEEEecCcccccHHHHHHHHHHHH
Confidence 86 33 3345555555444432 11 2257899999 467899999999999998
Q ss_pred CCC-CEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHH
Q psy7233 252 NPN-TLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRL 330 (383)
Q Consensus 252 ~~g-~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~ 330 (383)
+.. .++|+-+..+++....+ +-++.|.++..++++++.+...+|||+|.+|+.+++-+|++|++++||||++..|+-|
T Consensus 136 e~~k~~LIai~kgryykr~~G-l~lgpG~fv~aLeyatg~~a~vvGKP~~~fFe~al~~~gv~p~~aVMIGDD~~dDvgG 214 (262)
T KOG3040|consen 136 EMKKPLLIAIGKGRYYKRVDG-LCLGPGPFVAALEYATGCEATVVGKPSPFFFESALQALGVDPEEAVMIGDDLNDDVGG 214 (262)
T ss_pred cCCCCeEEEecCceeeeeccc-cccCchHHHHHhhhccCceEEEecCCCHHHHHHHHHhcCCChHHheEEccccccchhh
Confidence 754 66788899999988888 7889999999999999999999999999999999999999999999999999999999
Q ss_pred HHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 331 GYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 331 A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
|+++||+.|+|.+|...+.|.... +..||.+++++.|.++++-
T Consensus 215 Aq~~GMrgilVkTGK~rpsDe~k~---------~~~p~~~~d~f~~AVd~I~ 257 (262)
T KOG3040|consen 215 AQACGMRGILVKTGKFRPSDEEKP---------PVPPDLTADNFADAVDLII 257 (262)
T ss_pred HhhhcceeEEeeccccCCcccccC---------CCCcchhhhhHHHHHHHHH
Confidence 999999999999998888664442 5589999999999999874
No 11
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=99.97 E-value=2.4e-30 Score=241.97 Aligned_cols=232 Identities=24% Similarity=0.266 Sum_probs=187.2
Q ss_pred HHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC-CcCcccchHHHH
Q psy7233 89 KDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA-EPNEIIGTAYLA 167 (383)
Q Consensus 89 ~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i-~~~~i~~s~~~~ 167 (383)
.+++++|++++||+||||+++..++|++.+++++|+++|+++.++||+ +++..++.+.|+++|++. ..+.|+++....
T Consensus 2 ~~~~~~~~~~~~D~dG~l~~~~~~~pga~e~L~~L~~~G~~~~ivTN~-~~~~~~~~~~L~~~gl~~~~~~~Ii~s~~~~ 80 (242)
T TIGR01459 2 FDLINDYDVFLLDLWGVIIDGNHTYPGAVQNLNKIIAQGKPVYFVSNS-PRNIFSLHKTLKSLGINADLPEMIISSGEIA 80 (242)
T ss_pred hhhhhcCCEEEEecccccccCCccCccHHHHHHHHHHCCCEEEEEeCC-CCChHHHHHHHHHCCCCccccceEEccHHHH
Confidence 346789999999999999999999999999999999999999999994 567777778899999998 788999998877
Q ss_pred HHHHHhcC---C-CCCeEEEEeCcch-HHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEecc--CCCCh
Q psy7233 168 AQYLKKHL---D-PKKKAYIVGSSGI-ADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFD--SHISF 240 (383)
Q Consensus 168 ~~~l~~~~---~-~~~~~~~ig~~~l-~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~--~~~~~ 240 (383)
..++.... + ..+.++++|.... .+.+...+..... ..++++.|+++.+ ..++|
T Consensus 81 ~~~l~~~~~~~~~~~~~~~~vGd~~~d~~~~~~~~~~~~~--------------------~~~~~~~vvv~~~~~~~~~~ 140 (242)
T TIGR01459 81 VQMILESKKRFDIRNGIIYLLGHLENDIINLMQCYTTDDE--------------------NKANASLITIYRSENEKLDL 140 (242)
T ss_pred HHHHHhhhhhccCCCceEEEeCCcccchhhhcCCCccccC--------------------CcccCcEEEEcCCCcccCCH
Confidence 77765421 1 2456888888653 4444444332110 0234567777754 44889
Q ss_pred hhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCC-CCcEEE
Q psy7233 241 PKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLN-PERTLM 319 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~-p~e~l~ 319 (383)
+++.+++..++++|+++++||++..++... ...++.+.++..+..+ +.++...|||+|.+|+.+++++|.. +++++|
T Consensus 141 ~~~~~~l~~l~~~g~~~i~tN~d~~~~~~~-~~~~~~g~~~~~i~~~-g~~~~~~gKP~~~~~~~~~~~~~~~~~~~~~~ 218 (242)
T TIGR01459 141 DEFDELFAPIVARKIPNICANPDRGINQHG-IYRYGAGYYAELIKQL-GGKVIYSGKPYPAIFHKALKECSNIPKNRMLM 218 (242)
T ss_pred HHHHHHHHHHHhCCCcEEEECCCEeccCCC-ceEecccHHHHHHHHh-CCcEecCCCCCHHHHHHHHHHcCCCCcccEEE
Confidence 999999999888899999999999998544 4778888888887764 4465678999999999999999975 679999
Q ss_pred EecCchhhHHHHHHcCCcEEEEcC
Q psy7233 320 IGDRGNTDIRLGYNNGFQTLLVLT 343 (383)
Q Consensus 320 IGDs~~~DI~~A~~aGl~tv~V~~ 343 (383)
|||++.+||.+|+++|+++++|.|
T Consensus 219 vGD~~~~Di~~a~~~G~~~i~v~t 242 (242)
T TIGR01459 219 VGDSFYTDILGANRLGIDTALVLT 242 (242)
T ss_pred ECCCcHHHHHHHHHCCCeEEEEeC
Confidence 999988999999999999999975
No 12
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=99.86 E-value=3.1e-22 Score=184.55 Aligned_cols=130 Identities=24% Similarity=0.234 Sum_probs=105.2
Q ss_pred CCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~ 315 (383)
...|+++.++|..|++.|+++ ++||....... ..+....+..+|..+.+.+.....||+|..+..+++++|++|+
T Consensus 88 ~~~~~gv~e~L~~L~~~g~~l~i~T~k~~~~~~----~~l~~~gl~~~F~~i~g~~~~~~~KP~P~~l~~~~~~~~~~~~ 163 (220)
T COG0546 88 SRLFPGVKELLAALKSAGYKLGIVTNKPERELD----ILLKALGLADYFDVIVGGDDVPPPKPDPEPLLLLLEKLGLDPE 163 (220)
T ss_pred CccCCCHHHHHHHHHhCCCeEEEEeCCcHHHHH----HHHHHhCCccccceEEcCCCCCCCCcCHHHHHHHHHHhCCChh
Confidence 356899999999999999775 88887665442 2223333445666666655567899999999999999999999
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
+++||||+ ..||++|++||+.+|+|.||+...+.+... .||++++++.||.+++.
T Consensus 164 ~~l~VGDs-~~Di~aA~~Ag~~~v~v~~g~~~~~~l~~~-----------~~d~vi~~~~el~~~l~ 218 (220)
T COG0546 164 EALMVGDS-LNDILAAKAAGVPAVGVTWGYNSREELAQA-----------GADVVIDSLAELLALLA 218 (220)
T ss_pred heEEECCC-HHHHHHHHHcCCCEEEEECCCCCCcchhhc-----------CCCEEECCHHHHHHHHh
Confidence 99999999 999999999999999999997644444443 79999999999998875
No 13
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=99.86 E-value=2.3e-21 Score=182.33 Aligned_cols=128 Identities=15% Similarity=0.225 Sum_probs=97.6
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHH-HHhcCCCccccCCCCHHHHHHHHHHcCCC-C
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAV-KTGAQREPVVIGKPSKLIGSYLIEKYNLN-P 314 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~~gKP~p~~~~~al~~lgi~-p 314 (383)
..|+++.+.|..|+++|+++ |+||....... ..+....+..++ +.+.+.+....+||+|++|..+++++|+. |
T Consensus 99 ~~~pg~~e~L~~L~~~g~~l~IvT~~~~~~~~----~~l~~~gl~~~f~d~ii~~~~~~~~KP~p~~~~~a~~~l~~~~~ 174 (253)
T TIGR01422 99 SPIPGVIEVIAYLRARGIKIGSTTGYTREMMD----VVAPEAALQGYRPDYNVTTDDVPAGRPAPWMALKNAIELGVYDV 174 (253)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEECCCcHHHHH----HHHHHHHhcCCCCceEEccccCCCCCCCHHHHHHHHHHcCCCCc
Confidence 45789999999999988875 77886554321 111111222332 44556666778999999999999999995 9
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCC----h-------------------HHHHhcccccchhhcCCCccEEe
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTT----M-------------------EKAIAWSKSEDEEYKSRVADYYL 371 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~----~-------------------~~~~~~~~~~~~~~~~~~pd~vi 371 (383)
++|+||||+ .+||++|++||+++|+|.+|.+. . +++. ...||+++
T Consensus 175 ~~~l~IGDs-~~Di~aA~~aGi~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~~~~v~ 242 (253)
T TIGR01422 175 AACVKVGDT-VPDIEEGRNAGMWTVGLILSSNELGLSEEEYRALDPAELEARRAEATARLK-----------AAGAHYVI 242 (253)
T ss_pred hheEEECCc-HHHHHHHHHCCCeEEEEecCCcccCCCHHHHHhCCHHHHHHHHHHHHHHHH-----------hcCCCEeh
Confidence 999999999 79999999999999999999752 1 2232 23799999
Q ss_pred CCHhhHHHhh
Q psy7233 372 SSLGDMLPFL 381 (383)
Q Consensus 372 ~sl~eL~~~l 381 (383)
+++.+|.+++
T Consensus 243 ~~~~el~~~~ 252 (253)
T TIGR01422 243 DTLAELPAVI 252 (253)
T ss_pred hcHHHHHHhh
Confidence 9999998875
No 14
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=99.86 E-value=5.7e-22 Score=181.62 Aligned_cols=128 Identities=19% Similarity=0.171 Sum_probs=105.0
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcE
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~ 317 (383)
.|+++.+.+..|+++|+++ ++||....... ..+....+..+|+.+.+.+....+||+|++|.++++++|++|+++
T Consensus 83 ~~~g~~~~l~~L~~~g~~~~i~S~~~~~~~~----~~l~~~gl~~~f~~i~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~~ 158 (214)
T PRK13288 83 EYETVYETLKTLKKQGYKLGIVTTKMRDTVE----MGLKLTGLDEFFDVVITLDDVEHAKPDPEPVLKALELLGAKPEEA 158 (214)
T ss_pred cCcCHHHHHHHHHHCCCeEEEEeCCCHHHHH----HHHHHcCChhceeEEEecCcCCCCCCCcHHHHHHHHHcCCCHHHE
Confidence 5789999999999888875 78887553321 122333455667777777777789999999999999999999999
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
+||||+ .+|+++|+++|+++|+|.+|....+++.+. .|+++++++.++.+++.
T Consensus 159 ~~iGDs-~~Di~aa~~aG~~~i~v~~g~~~~~~l~~~-----------~~~~~i~~~~~l~~~i~ 211 (214)
T PRK13288 159 LMVGDN-HHDILAGKNAGTKTAGVAWTIKGREYLEQY-----------KPDFMLDKMSDLLAIVG 211 (214)
T ss_pred EEECCC-HHHHHHHHHCCCeEEEEcCCCCCHHHHhhc-----------CcCEEECCHHHHHHHHh
Confidence 999999 799999999999999999997776665543 68999999999998875
No 15
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=99.86 E-value=5.9e-22 Score=183.78 Aligned_cols=128 Identities=16% Similarity=0.123 Sum_probs=99.8
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.++++.|+++|.++ ++||....... .......+..+|+.+.+.+....+||+|++|..+++++|++|++
T Consensus 95 ~~~pg~~~~L~~L~~~g~~l~i~Tn~~~~~~~----~~l~~~~l~~~f~~i~~~~~~~~~KP~p~~~~~~~~~l~~~p~~ 170 (229)
T PRK13226 95 QLFDGVEGMLQRLECAGCVWGIVTNKPEYLAR----LILPQLGWEQRCAVLIGGDTLAERKPHPLPLLVAAERIGVAPTD 170 (229)
T ss_pred eeCCCHHHHHHHHHHCCCeEEEECCCCHHHHH----HHHHHcCchhcccEEEecCcCCCCCCCHHHHHHHHHHhCCChhh
Confidence 34789999999999988875 88886543221 12222234455665566565667899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCCh-HHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTM-EKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~-~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
|+||||+ .+|+.+|+++|+.+|+|.+|.... +.... ..|+++++++.+|.+.+
T Consensus 171 ~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~-----------~~~~~~i~~~~el~~~~ 224 (229)
T PRK13226 171 CVYVGDD-ERDILAARAAGMPSVAALWGYRLHDDDPLA-----------WQADVLVEQPQLLWNPA 224 (229)
T ss_pred EEEeCCC-HHHHHHHHHCCCcEEEEeecCCCCCcChhh-----------cCCCeeeCCHHHHHHHh
Confidence 9999999 899999999999999999997532 22222 37999999999998865
No 16
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=99.85 E-value=3.8e-21 Score=176.65 Aligned_cols=127 Identities=20% Similarity=0.224 Sum_probs=99.2
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.++|..|+++|+++ ++||....... ..+....+..+|+.+...+....+||+|++|..+++++|++|++
T Consensus 94 ~~~~g~~~~L~~L~~~g~~~~i~Tn~~~~~~~----~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 169 (221)
T TIGR02253 94 RVYPGVRDTLMELRESGYRLGIITDGLPVKQW----EKLERLGVRDFFDAVITSEEEGVEKPHPKIFYAALKRLGVKPEE 169 (221)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEeCCchHHHH----HHHHhCChHHhccEEEEeccCCCCCCCHHHHHHHHHHcCCChhh
Confidence 45789999999999888775 88987654321 22333445667777777777788999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHH
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDML 378 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~ 378 (383)
++||||++.+|+.+|+++|+++|+|.+|.....+... ...|+++++++.+|+
T Consensus 170 ~~~igDs~~~di~~A~~aG~~~i~~~~~~~~~~~~~~----------~~~~~~~i~~~~el~ 221 (221)
T TIGR02253 170 AVMVGDRLDKDIKGAKNLGMKTVWINQGKSSKMEDDV----------YPYPDYEISSLRELL 221 (221)
T ss_pred EEEECCChHHHHHHHHHCCCEEEEECCCCCccccccc----------ccCCCeeeCcHHhhC
Confidence 9999999559999999999999999988654322111 236899999998863
No 17
>KOG1618|consensus
Probab=99.85 E-value=1.7e-20 Score=174.55 Aligned_cols=248 Identities=20% Similarity=0.219 Sum_probs=195.2
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHc----CceEEEEcCCCCCCHHHHHHHHHh-cCCCCCcCcccchHHHHHH
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSL----GKKIFYVTNNSTKTREQLIVKLKH-LGFNAEPNEIIGTAYLAAQ 169 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~----Gi~v~ivTn~~~~~~~~~~~~L~~-lG~~i~~~~i~~s~~~~~~ 169 (383)
--++.||+||||+.|+++++++.++++.|..+ .+|++++||.+.-+...-++.|.. +|+++++++++.|......
T Consensus 35 ~fgfafDIDGVL~RG~~~i~~~~~Alr~L~~~~g~lkIP~vfLTNGGg~~E~~rA~~lS~~Lgv~Vs~dqviqSHsP~r~ 114 (389)
T KOG1618|consen 35 TFGFAFDIDGVLFRGHRPIPGALKALRRLVDNQGQLKIPFVFLTNGGGILESSRAQELSALLGVEVSADQVIQSHSPFRL 114 (389)
T ss_pred ceeEEEecccEEEecCCCCcchHHHHHHHHhcCCCeeccEEEEeCCCCcchhhHHHHHHHhhCCccCHHHHHhhcChHHH
Confidence 45999999999999999999999999999998 899999999888888888888886 9999999999988776665
Q ss_pred HHHhcCCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCC-CCCc---c---------cccccCCCCCccEEEEeccC
Q psy7233 170 YLKKHLDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPG-RDLK---T---------DHEKLNLDPHVGAVVVGFDS 236 (383)
Q Consensus 170 ~l~~~~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~-~~~~---~---------~~~~~~~~~~~~~Vv~g~~~ 236 (383)
+. + ...+.+.+.|....+...+..|++.+... |.+..| +.+. + +.+..+..+.+++|++ +.+
T Consensus 115 l~-~--~~~k~vLv~G~~~vr~vAegyGFk~Vvt~-D~l~k~f~~ldP~t~~~~~~k~~~~~R~~~~~r~ieAv~~-~~d 189 (389)
T KOG1618|consen 115 LV-E--YHYKRVLVVGQGSVREVAEGYGFKNVVTV-DELAKYFPLLDPFTDLSRELKTTKLARDRELFRRIEAVLL-LGD 189 (389)
T ss_pred Hh-h--hhhceEEEecCCcHHHHhhccCccceeeH-HHHHHhCCCcccccchhHhhhcccchhccccccceeEEEE-ecC
Confidence 44 3 46789999999999999999999865422 222222 1111 1 1122234677888888 677
Q ss_pred CCChhh-HHHHHHHhhCCC--------------CEEEEecCCCCCCCCCCccccCcchHHHHHHHhc----CC--Ccccc
Q psy7233 237 HISFPK-LMKAACYLTNPN--------------TLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGA----QR--EPVVI 295 (383)
Q Consensus 237 ~~~~~~-l~~~l~~L~~~g--------------~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~----~~--~~~~~ 295 (383)
+..|.. ++-+++.+..+| ++++++|.|..|+.+..+.++|.|.|.-+++.+. |. .....
T Consensus 190 Pv~W~~dlQli~D~l~snG~~gt~~~a~~~~Phipiy~sN~DLlW~~e~~lpR~G~GaF~l~lesiy~kltGk~L~~~t~ 269 (389)
T KOG1618|consen 190 PVRWETDLQLIMDVLLSNGSPGTGRLATGPYPHIPIYASNMDLLWMAEYKLPRFGHGAFRLCLESIYQKLTGKPLRYTTL 269 (389)
T ss_pred chhhhhhHHHHHHHHhcCCCCCcccccCCCCCCCceEEecccccccccCCCccccchHHHHHHHHHHHHhcCCccccccc
Confidence 888875 777777777643 3579999999999888888999999887666544 32 23578
Q ss_pred CCCCHHHHHHHHHHc--------CC-CCCcEEEEecCchhhHHHHH---------------HcCCcEEEEcCCCCC
Q psy7233 296 GKPSKLIGSYLIEKY--------NL-NPERTLMIGDRGNTDIRLGY---------------NNGFQTLLVLTGDTT 347 (383)
Q Consensus 296 gKP~p~~~~~al~~l--------gi-~p~e~l~IGDs~~~DI~~A~---------------~aGl~tv~V~~G~~~ 347 (383)
|||++-.|++|...+ |. .++.+.||||+|.+|+.+|+ +-|+-+|+|.||+++
T Consensus 270 GKPt~ltY~~A~~vl~~~ak~~~~~~~~k~lymvGDNP~sDv~GA~lf~~yap~~~~g~~~~~~w~SILV~TGV~~ 345 (389)
T KOG1618|consen 270 GKPTKLTYDYAEDVLRRQAKRRGGAAPIKKLYMVGDNPMSDVRGANLFHQYAPELGAGGSANYGWISILVRTGVYN 345 (389)
T ss_pred CCCceehHHhHHHHHHHHHHhhcccCCcceeeeecCCCcccccccccccccccccccccccCCCceEEEEeeeeec
Confidence 999999998886544 33 47789999999999999997 779999999999776
No 18
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=99.85 E-value=5.8e-21 Score=178.17 Aligned_cols=127 Identities=15% Similarity=0.068 Sum_probs=99.2
Q ss_pred CCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 237 HISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
...|+++.++|..|+++....++||.+... .. ..+..+|+.+.+.+....+||+|++|..+++++|++|++
T Consensus 112 ~~~~~gv~~~L~~L~~~~~l~i~Tn~~~~~------~~---~gl~~~fd~i~~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 182 (238)
T PRK10748 112 IDVPQATHDTLKQLAKKWPLVAITNGNAQP------EL---FGLGDYFEFVLRAGPHGRSKPFSDMYHLAAEKLNVPIGE 182 (238)
T ss_pred CCCCccHHHHHHHHHcCCCEEEEECCCchH------HH---CCcHHhhceeEecccCCcCCCcHHHHHHHHHHcCCChhH
Confidence 345789999999999865667889965531 12 235566777777776778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
|+||||++..||.+|+++|+++|||..+........ .....|++++++|.||.++|
T Consensus 183 ~~~VGD~~~~Di~~A~~aG~~~i~v~~~~~~~~~~~---------~~~~~p~~~i~~l~el~~~~ 238 (238)
T PRK10748 183 ILHVGDDLTTDVAGAIRCGMQACWINPENGDLMQTW---------DSRLLPHIEISRLASLTSLI 238 (238)
T ss_pred EEEEcCCcHHHHHHHHHCCCeEEEEcCCCccccccc---------cccCCCCEEECCHHHHHhhC
Confidence 999999977999999999999999987643211100 11347999999999999875
No 19
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=99.84 E-value=3e-21 Score=181.16 Aligned_cols=122 Identities=11% Similarity=0.088 Sum_probs=99.1
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.++|..|+++|+++ |+||....... ..+....+..+|+.+.+.+....+||+|++|+.+++++|++|++
T Consensus 108 ~l~pgv~e~L~~L~~~g~~l~I~Tn~~~~~~~----~~l~~~gl~~~Fd~iv~~~~~~~~KP~p~~~~~a~~~~~~~~~~ 183 (248)
T PLN02770 108 KPLNGLYKLKKWIEDRGLKRAAVTNAPRENAE----LMISLLGLSDFFQAVIIGSECEHAKPHPDPYLKALEVLKVSKDH 183 (248)
T ss_pred CcCccHHHHHHHHHHcCCeEEEEeCCCHHHHH----HHHHHcCChhhCcEEEecCcCCCCCCChHHHHHHHHHhCCChhH
Confidence 45789999999999988875 88987655431 22333345567777777777778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGD 376 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~e 376 (383)
|+||||+ ..|+++|+++|+++|+|.+|. ..+.+.. ..|+++++++.+
T Consensus 184 ~l~vgDs-~~Di~aA~~aGi~~i~v~~g~-~~~~l~~-----------~~a~~vi~~~~e 230 (248)
T PLN02770 184 TFVFEDS-VSGIKAGVAAGMPVVGLTTRN-PESLLME-----------AKPTFLIKDYED 230 (248)
T ss_pred EEEEcCC-HHHHHHHHHCCCEEEEEeCCC-CHHHHhh-----------cCCCEEeccchh
Confidence 9999999 799999999999999999984 4444443 279999999998
No 20
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=99.84 E-value=1.9e-21 Score=178.78 Aligned_cols=128 Identities=20% Similarity=0.202 Sum_probs=102.8
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHH--HHHHHhcCCCccccCCCCHHHHHHHHHHcCCC-
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMV--AAVKTGAQREPVVIGKPSKLIGSYLIEKYNLN- 313 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~--~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~- 313 (383)
..|+++.+.+..|+++|+++ ++||....... ..+....+. .+|+...+.+....+||+|++|..+++++|+.
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~~~~~~~----~~l~~~~l~~~~~f~~i~~~~~~~~~KP~p~~~~~a~~~~~~~~ 162 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGFDRDTAE----RLLEKLGWTVGDDVDAVVCPSDVAAGRPAPDLILRAMELTGVQD 162 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCCchHHHH----HHHHHhhhhhhccCCEEEcCCcCCCCCCCHHHHHHHHHHcCCCC
Confidence 46889999999999888875 88887654331 222223344 55666666666778999999999999999998
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcE-EEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQT-LLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~t-v~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
|++|+||||+ .+||++|+++|+.+ |+|.+|..+.+.+... .|+++++++.+|.+++
T Consensus 163 ~~~~~~igD~-~~Di~aa~~aG~~~~i~~~~g~~~~~~~~~~-----------~~~~~i~~~~~l~~~~ 219 (220)
T TIGR03351 163 VQSVAVAGDT-PNDLEAGINAGAGAVVGVLTGAHDAEELSRH-----------PHTHVLDSVADLPALL 219 (220)
T ss_pred hhHeEEeCCC-HHHHHHHHHCCCCeEEEEecCCCcHHHHhhc-----------CCceeecCHHHHHHhh
Confidence 7999999999 79999999999999 9999987776665543 7899999999998865
No 21
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=99.84 E-value=1.4e-20 Score=178.42 Aligned_cols=129 Identities=13% Similarity=0.155 Sum_probs=96.6
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHH-HHHhcCCCccccCCCCHHHHHHHHHHcCCC-C
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAA-VKTGAQREPVVIGKPSKLIGSYLIEKYNLN-P 314 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~gKP~p~~~~~al~~lgi~-p 314 (383)
..|+++.++|..|+++|+++ |+||....... ..+....+..+ ++.+.+.+....+||+|++|..+++++|+. |
T Consensus 101 ~~~pg~~elL~~L~~~g~~l~I~T~~~~~~~~----~~l~~~~l~~~~~d~i~~~~~~~~~KP~p~~~~~a~~~l~~~~~ 176 (267)
T PRK13478 101 TPIPGVLEVIAALRARGIKIGSTTGYTREMMD----VVVPLAAAQGYRPDHVVTTDDVPAGRPYPWMALKNAIELGVYDV 176 (267)
T ss_pred CCCCCHHHHHHHHHHCCCEEEEEcCCcHHHHH----HHHHHHhhcCCCceEEEcCCcCCCCCCChHHHHHHHHHcCCCCC
Confidence 45789999999999988876 77876554221 11111111222 244555566678899999999999999996 6
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCC----h-------------------HHHHhcccccchhhcCCCccEEe
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTT----M-------------------EKAIAWSKSEDEEYKSRVADYYL 371 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~----~-------------------~~~~~~~~~~~~~~~~~~pd~vi 371 (383)
++|+||||+ .+|+++|++||+++|+|.+|.+. . +.+. ...|++++
T Consensus 177 ~e~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~-----------~~~a~~vi 244 (267)
T PRK13478 177 AACVKVDDT-VPGIEEGLNAGMWTVGVILSGNELGLSEEEYQALSAAELAARRERARARLR-----------AAGAHYVI 244 (267)
T ss_pred cceEEEcCc-HHHHHHHHHCCCEEEEEccCcccccCCHHHHHhcCHHHHHHHHHHHHHHHH-----------HcCCCeeh
Confidence 999999999 79999999999999999998752 1 2222 23799999
Q ss_pred CCHhhHHHhhh
Q psy7233 372 SSLGDMLPFLS 382 (383)
Q Consensus 372 ~sl~eL~~~l~ 382 (383)
+++.+|.+++.
T Consensus 245 ~~~~~l~~~l~ 255 (267)
T PRK13478 245 DTIADLPAVIA 255 (267)
T ss_pred hhHHHHHHHHH
Confidence 99999988764
No 22
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=99.84 E-value=8.2e-21 Score=172.82 Aligned_cols=130 Identities=19% Similarity=0.205 Sum_probs=105.2
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+++..|+++|+++ ++||....... ..+....+..+|+.+.+.+....+||+|++|..+++++|++|++
T Consensus 75 ~~~~g~~~~L~~L~~~g~~~~i~Sn~~~~~~~----~~l~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 150 (205)
T TIGR01454 75 EVFPGVPELLAELRADGVGTAIATGKSGPRAR----SLLEALGLLPLFDHVIGSDEVPRPKPAPDIVREALRLLDVPPED 150 (205)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCchHHHH----HHHHHcCChhheeeEEecCcCCCCCCChHHHHHHHHHcCCChhh
Confidence 45789999999999888765 88886554331 12222334455666666666677899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhhC
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLSS 383 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~~ 383 (383)
++||||+ .+|+.+|+++|+++|+|.+|.++.+++... .|+++++++.+|.+++++
T Consensus 151 ~l~igD~-~~Di~aA~~~Gi~~i~~~~g~~~~~~l~~~-----------~~~~~~~~~~~l~~~~~~ 205 (205)
T TIGR01454 151 AVMVGDA-VTDLASARAAGTATVAALWGEGDAGELLAA-----------RPDFLLRKPQSLLALCRS 205 (205)
T ss_pred eEEEcCC-HHHHHHHHHcCCeEEEEEecCCChhhhhhc-----------CCCeeeCCHHHHHHHhhC
Confidence 9999999 799999999999999999998887766542 799999999999998875
No 23
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=99.83 E-value=2.1e-20 Score=176.58 Aligned_cols=124 Identities=18% Similarity=0.196 Sum_probs=99.9
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcE
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~ 317 (383)
.|+++.+.|..|+++|+++ ++||....... ..+....+..+|+.+.+.+....+||+|++|..+++++|++|++|
T Consensus 110 l~pg~~e~L~~L~~~g~~l~I~Tn~~~~~~~----~~l~~~gl~~~Fd~ii~~~d~~~~KP~Pe~~~~a~~~l~~~p~~~ 185 (260)
T PLN03243 110 LRPGSREFVQALKKHEIPIAVASTRPRRYLE----RAIEAVGMEGFFSVVLAAEDVYRGKPDPEMFMYAAERLGFIPERC 185 (260)
T ss_pred cCCCHHHHHHHHHHCCCEEEEEeCcCHHHHH----HHHHHcCCHhhCcEEEecccCCCCCCCHHHHHHHHHHhCCChHHe
Confidence 4789999999999988876 88887654331 223333466677777777777789999999999999999999999
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
+||||+ ..|+++|+++|+++|+|. |......+. .|+++++++.++..+.
T Consensus 186 l~IgDs-~~Di~aA~~aG~~~i~v~-g~~~~~~l~-------------~ad~vi~~~~el~~~~ 234 (260)
T PLN03243 186 IVFGNS-NSSVEAAHDGCMKCVAVA-GKHPVYELS-------------AGDLVVRRLDDLSVVD 234 (260)
T ss_pred EEEcCC-HHHHHHHHHcCCEEEEEe-cCCchhhhc-------------cCCEEeCCHHHHHHHH
Confidence 999999 899999999999999996 544443322 5899999999997654
No 24
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=99.83 E-value=6.6e-21 Score=173.94 Aligned_cols=128 Identities=17% Similarity=0.189 Sum_probs=102.4
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+++..|+++|.++ ++||....... ..+....+..+++.+.+.+....+||+|++|..+++++|++|++
T Consensus 85 ~~~~g~~~~L~~l~~~g~~~~i~S~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~Kp~p~~~~~~~~~~~~~~~~ 160 (213)
T TIGR01449 85 SVFPGVEATLGALRAKGLRLGLVTNKPTPLAR----PLLELLGLAKYFSVLIGGDSLAQRKPHPDPLLLAAERLGVAPQQ 160 (213)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH----HHHHHcCcHhhCcEEEecCCCCCCCCChHHHHHHHHHcCCChhH
Confidence 45789999999999888765 78886554331 22233344556666667776778899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
+++|||+ .+|+.+|+++|+.+++|.+|.++.+.+.. ..|+++++++.+|..++
T Consensus 161 ~~~igDs-~~d~~aa~~aG~~~i~v~~g~~~~~~l~~-----------~~a~~~i~~~~~l~~~~ 213 (213)
T TIGR01449 161 MVYVGDS-RVDIQAARAAGCPSVLLTYGYRYGEAIDL-----------LPPDVLYDSLNELPPLL 213 (213)
T ss_pred eEEeCCC-HHHHHHHHHCCCeEEEEccCCCCCcchhh-----------cCCCeEeCCHHHHHhhC
Confidence 9999999 99999999999999999998766544443 26899999999998764
No 25
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=99.83 E-value=4.5e-20 Score=149.36 Aligned_cols=101 Identities=45% Similarity=0.725 Sum_probs=91.7
Q ss_pred EEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhcCCC
Q psy7233 98 VLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKHLDP 177 (383)
Q Consensus 98 ViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~~~~ 177 (383)
|+||+|||||++.+++|||.++++++++.|++++++||+++++++++.++|+.+|+++++++|++++..+++|+.++ ..
T Consensus 1 ~l~D~dGvl~~g~~~ipga~e~l~~L~~~g~~~~~lTNns~~s~~~~~~~L~~~Gi~~~~~~i~ts~~~~~~~l~~~-~~ 79 (101)
T PF13344_consen 1 FLFDLDGVLYNGNEPIPGAVEALDALRERGKPVVFLTNNSSRSREEYAKKLKKLGIPVDEDEIITSGMAAAEYLKEH-KG 79 (101)
T ss_dssp EEEESTTTSEETTEE-TTHHHHHHHHHHTTSEEEEEES-SSS-HHHHHHHHHHTTTT--GGGEEEHHHHHHHHHHHH-TT
T ss_pred CEEeCccEeEeCCCcCcCHHHHHHHHHHcCCCEEEEeCCCCCCHHHHHHHHHhcCcCCCcCEEEChHHHHHHHHHhc-CC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999997 77
Q ss_pred CCeEEEEeCcchHHHHHHcCCc
Q psy7233 178 KKKAYIVGSSGIADELNLAGIE 199 (383)
Q Consensus 178 ~~~~~~ig~~~l~~~l~~~gi~ 199 (383)
.++++++|.+++.+++++.|++
T Consensus 80 ~~~v~vlG~~~l~~~l~~~G~e 101 (101)
T PF13344_consen 80 GKKVYVLGSDGLREELREAGFE 101 (101)
T ss_dssp SSEEEEES-HHHHHHHHHTTEE
T ss_pred CCEEEEEcCHHHHHHHHHcCCC
Confidence 8999999999999999999874
No 26
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=99.82 E-value=2.1e-20 Score=172.52 Aligned_cols=131 Identities=18% Similarity=0.210 Sum_probs=97.9
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
...+++.+.+..|+++|+++ ++||+.+... . ..+....+.++|+..+..+.+..+||+|++|+.+++++|++|++
T Consensus 86 ~~~pGv~~~l~~L~~~~i~~avaS~s~~~~~-~---~~L~~~gl~~~f~~~v~~~dv~~~KP~Pd~yL~Aa~~Lgv~P~~ 161 (221)
T COG0637 86 KPIPGVVELLEQLKARGIPLAVASSSPRRAA-E---RVLARLGLLDYFDVIVTADDVARGKPAPDIYLLAAERLGVDPEE 161 (221)
T ss_pred CCCccHHHHHHHHHhcCCcEEEecCChHHHH-H---HHHHHccChhhcchhccHHHHhcCCCCCHHHHHHHHHcCCChHH
Confidence 45688999999999998876 4455433222 1 23444556677777777777888999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
|++|+|+ .++|++|++|||.+|.|..+...+ ...+. .....+.+..++.++...+.
T Consensus 162 CvviEDs-~~Gi~Aa~aAGm~vv~v~~~~~~~-~~~~~--------~~~~~~~~~~~~~~l~~~~~ 217 (221)
T COG0637 162 CVVVEDS-PAGIQAAKAAGMRVVGVPAGHDRP-HLDPL--------DAHGADTVLLDLAELPALLE 217 (221)
T ss_pred eEEEecc-hhHHHHHHHCCCEEEEecCCCCcc-ccchh--------hhhhcchhhccHHHHHHHHH
Confidence 9999999 999999999999999998853321 11110 12366777888888776543
No 27
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=99.82 E-value=7.8e-21 Score=175.17 Aligned_cols=126 Identities=13% Similarity=0.109 Sum_probs=98.6
Q ss_pred CCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~ 315 (383)
...|+++.+.+..++++|+++ ++||....... .......+..+|+...+.+....+||+|++|..+++++|++|+
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~----~~l~~~~l~~~f~~~~~~~~~~~~Kp~~~~~~~~~~~~~~~~~ 166 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASPLHMLE----AVLTMFDLRDYFDALASAEKLPYSKPHPEVYLNCAAKLGVDPL 166 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCcHHHHH----HHHHhCcchhcccEEEEcccCCCCCCCHHHHHHHHHHcCCCHH
Confidence 356899999999999988875 77886554331 2223334555666666666677899999999999999999999
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHH
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLP 379 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~ 379 (383)
+|++|||+ .+|+++|++||+++|+|.++....+... ..+++++.|+.|+..
T Consensus 167 ~~~~igDs-~~Di~aA~~aG~~~i~v~~~~~~~~~~~------------~~~~~~~~~~~dl~~ 217 (222)
T PRK10826 167 TCVALEDS-FNGMIAAKAARMRSIVVPAPEQQNDPRW------------ALADVKLESLTELTA 217 (222)
T ss_pred HeEEEcCC-hhhHHHHHHcCCEEEEecCCccCchhhh------------hhhheeccCHHHHhh
Confidence 99999999 7999999999999999988754432211 158999999999875
No 28
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=99.81 E-value=6.8e-20 Score=174.32 Aligned_cols=129 Identities=15% Similarity=0.203 Sum_probs=101.3
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+.+..|+++|+++ ++||....... ..+....+..+++.+.+.+....+||+|++|+.+++++|++|++
T Consensus 101 ~~~~g~~e~L~~Lk~~g~~l~ivTn~~~~~~~----~~l~~~~i~~~f~~i~~~d~~~~~Kp~p~~~~~~~~~~g~~~~~ 176 (272)
T PRK13223 101 VVYPGVRDTLKWLKKQGVEMALITNKPERFVA----PLLDQMKIGRYFRWIIGGDTLPQKKPDPAALLFVMKMAGVPPSQ 176 (272)
T ss_pred ccCCCHHHHHHHHHHCCCeEEEEECCcHHHHH----HHHHHcCcHhhCeEEEecCCCCCCCCCcHHHHHHHHHhCCChhH
Confidence 45789999999999888765 77886543221 12222234455665666665667899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
|++|||+ .+||++|+++|+++++|.+|......+.+. .|+++++++.+|.+++.
T Consensus 177 ~l~IGD~-~~Di~aA~~aGi~~i~v~~G~~~~~~l~~~-----------~~~~vi~~l~el~~~~~ 230 (272)
T PRK13223 177 SLFVGDS-RSDVLAAKAAGVQCVALSYGYNHGRPIAEE-----------SPALVIDDLRALLPGCA 230 (272)
T ss_pred EEEECCC-HHHHHHHHHCCCeEEEEecCCCCchhhhhc-----------CCCEEECCHHHHHHHHh
Confidence 9999999 999999999999999999997766655532 69999999999987653
No 29
>PRK11587 putative phosphatase; Provisional
Probab=99.81 E-value=9.3e-20 Score=167.65 Aligned_cols=121 Identities=17% Similarity=0.183 Sum_probs=89.8
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+++..|+++|+++ ++||...... .......+.. .+....+.+....+||+|++|..+++++|++|++
T Consensus 83 ~~~pg~~e~L~~L~~~g~~~~ivTn~~~~~~-~~~l~~~~l~----~~~~i~~~~~~~~~KP~p~~~~~~~~~~g~~p~~ 157 (218)
T PRK11587 83 TALPGAIALLNHLNKLGIPWAIVTSGSVPVA-SARHKAAGLP----APEVFVTAERVKRGKPEPDAYLLGAQLLGLAPQE 157 (218)
T ss_pred eeCcCHHHHHHHHHHcCCcEEEEcCCCchHH-HHHHHhcCCC----CccEEEEHHHhcCCCCCcHHHHHHHHHcCCCccc
Confidence 45889999999999888775 7788654322 1111112221 1223334444567899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHH
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDML 378 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~ 378 (383)
|+||||+ ..|+++|++||+++|+|.+|... .. ...|+++++++.+|.
T Consensus 158 ~l~igDs-~~di~aA~~aG~~~i~v~~~~~~-~~-------------~~~~~~~~~~~~el~ 204 (218)
T PRK11587 158 CVVVEDA-PAGVLSGLAAGCHVIAVNAPADT-PR-------------LDEVDLVLHSLEQLT 204 (218)
T ss_pred EEEEecc-hhhhHHHHHCCCEEEEECCCCch-hh-------------hccCCEEecchhhee
Confidence 9999999 89999999999999999887432 11 126899999999874
No 30
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=99.80 E-value=1.7e-19 Score=177.15 Aligned_cols=123 Identities=15% Similarity=0.139 Sum_probs=99.6
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.++|..|+++|+++ ++||....... ..+....+..+|+.+.+.+....+||+|++|..+++++|+.|++
T Consensus 216 ~l~pGa~ElL~~Lk~~GiklaIaSn~~~~~~~----~~L~~lgL~~yFd~Iv~sddv~~~KP~Peifl~A~~~lgl~Pee 291 (381)
T PLN02575 216 RLRTGSQEFVNVLMNYKIPMALVSTRPRKTLE----NAIGSIGIRGFFSVIVAAEDVYRGKPDPEMFIYAAQLLNFIPER 291 (381)
T ss_pred CcCcCHHHHHHHHHHCCCeEEEEeCCCHHHHH----HHHHHcCCHHHceEEEecCcCCCCCCCHHHHHHHHHHcCCCccc
Confidence 35789999999999999876 88887654331 23334446677888888887778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHH
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLP 379 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~ 379 (383)
|+||||+ ..||++|+++|+++|+|.++. ....+. .++++++++.||..
T Consensus 292 cl~IGDS-~~DIeAAk~AGm~~IgV~~~~-~~~~l~-------------~Ad~iI~s~~EL~~ 339 (381)
T PLN02575 292 CIVFGNS-NQTVEAAHDARMKCVAVASKH-PIYELG-------------AADLVVRRLDELSI 339 (381)
T ss_pred EEEEcCC-HHHHHHHHHcCCEEEEECCCC-ChhHhc-------------CCCEEECCHHHHHH
Confidence 9999999 899999999999999998763 222221 58999999999843
No 31
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=99.80 E-value=2e-19 Score=172.33 Aligned_cols=125 Identities=16% Similarity=0.138 Sum_probs=92.2
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.+.|..|+++|+++ ++||....... ..........+...+..+ +.+....+||+|++|..+++++|++|++
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~~~~~~~-~~l~~~~~~~~~~~~~~v-~~~~~~~~KP~p~~~~~a~~~~~~~p~~ 221 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTSNEKAVS-KIVNTLLGPERAQGLDVF-AGDDVPKKKPDPDIYNLAAETLGVDPSR 221 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhccccccCceEEE-eccccCCCCCCHHHHHHHHHHhCcChHH
Confidence 35789999999999999876 88886543221 000000000112222222 3444567899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHH
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDML 378 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~ 378 (383)
|+||||+ .+|+++|+++|+.+|+|.+|.+..+++. .|+++++++.++.
T Consensus 222 ~l~IGDs-~~Di~aA~~aG~~~i~v~~g~~~~~~l~-------------~ad~vi~~~~~l~ 269 (286)
T PLN02779 222 CVVVEDS-VIGLQAAKAAGMRCIVTKSSYTADEDFS-------------GADAVFDCLGDVP 269 (286)
T ss_pred EEEEeCC-HHhHHHHHHcCCEEEEEccCCccccccC-------------CCcEEECChhhcc
Confidence 9999999 8999999999999999999876654431 6899999999875
No 32
>PRK09449 dUMP phosphatase; Provisional
Probab=99.79 E-value=2.9e-19 Score=164.66 Aligned_cols=127 Identities=21% Similarity=0.218 Sum_probs=97.5
Q ss_pred CChhhHHHHHHHhhCCCCE-EEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCC-C
Q psy7233 238 ISFPKLMKAACYLTNPNTL-FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNP-E 315 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~-~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p-~ 315 (383)
..|+++.+++..|++ +.+ .++||....... ..+....+..+|+.+...+.....||+|++|..+++++|+.| +
T Consensus 95 ~~~~g~~~~L~~L~~-~~~~~i~Tn~~~~~~~----~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~~~~~~~~~~~~~~~ 169 (224)
T PRK09449 95 TPLPGAVELLNALRG-KVKMGIITNGFTELQQ----VRLERTGLRDYFDLLVISEQVGVAKPDVAIFDYALEQMGNPDRS 169 (224)
T ss_pred ccCccHHHHHHHHHh-CCeEEEEeCCcHHHHH----HHHHhCChHHHcCEEEEECccCCCCCCHHHHHHHHHHcCCCCcc
Confidence 357899999999995 555 588986554321 223334466777777777777889999999999999999864 8
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
+|++|||++.+||.+|+++|+++|+|.++... ... ...|+++++++.+|.+++.
T Consensus 170 ~~~~vgD~~~~Di~~A~~aG~~~i~~~~~~~~--~~~-----------~~~~~~~i~~~~el~~~l~ 223 (224)
T PRK09449 170 RVLMVGDNLHSDILGGINAGIDTCWLNAHGRE--QPE-----------GIAPTYQVSSLSELEQLLC 223 (224)
T ss_pred cEEEEcCCcHHHHHHHHHCCCcEEEECCCCCC--CCC-----------CCCCeEEECCHHHHHHHHh
Confidence 99999999557999999999999999754221 111 2368999999999998875
No 33
>PLN02940 riboflavin kinase
Probab=99.79 E-value=1.9e-19 Score=178.97 Aligned_cols=124 Identities=19% Similarity=0.170 Sum_probs=99.0
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccC-cchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPG-TGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~ 315 (383)
..|+++.+.++.|+++|+++ ++||....... ..+. ...+.++|+.+.+.+.+..+||+|++|..+++++|++|+
T Consensus 93 ~l~pGv~elL~~Lk~~g~~l~IvTn~~~~~~~----~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~lgv~p~ 168 (382)
T PLN02940 93 KALPGANRLIKHLKSHGVPMALASNSPRANIE----AKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRLNVEPS 168 (382)
T ss_pred CCCcCHHHHHHHHHHCCCcEEEEeCCcHHHHH----HHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHcCCChh
Confidence 45789999999999988775 88887554321 1222 334567777777777777899999999999999999999
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHH
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLP 379 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~ 379 (383)
+|+||||+ ..|+++|+++|+++|+|.+|...... ...|+++++++.++..
T Consensus 169 ~~l~VGDs-~~Di~aA~~aGi~~I~v~~g~~~~~~-------------~~~ad~~i~sl~el~~ 218 (382)
T PLN02940 169 NCLVIEDS-LPGVMAGKAAGMEVIAVPSIPKQTHL-------------YSSADEVINSLLDLQP 218 (382)
T ss_pred HEEEEeCC-HHHHHHHHHcCCEEEEECCCCcchhh-------------ccCccEEeCCHhHcCH
Confidence 99999999 88999999999999999988543221 1268999999998753
No 34
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=99.79 E-value=3.8e-19 Score=163.35 Aligned_cols=126 Identities=23% Similarity=0.265 Sum_probs=98.3
Q ss_pred ChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHc-CCCCCcE
Q psy7233 239 SFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKY-NLNPERT 317 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~l-gi~p~e~ 317 (383)
.++++.+.+..++++....++||....... ..+....+..+|+.+.+......+||+|.+|..+++++ |++|+++
T Consensus 98 ~~~g~~~~L~~l~~~~~~~i~Sn~~~~~~~----~~l~~~~l~~~fd~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~~~ 173 (224)
T TIGR02254 98 LLPGAFELMENLQQKFRLYIVTNGVRETQY----KRLRKSGLFPFFDDIFVSEDAGIQKPDKEIFNYALERMPKFSKEEV 173 (224)
T ss_pred eCccHHHHHHHHHhcCcEEEEeCCchHHHH----HHHHHCCcHhhcCEEEEcCccCCCCCCHHHHHHHHHHhcCCCchhe
Confidence 468899999999987444688987554321 22333345566777777777778999999999999999 9999999
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
++|||++.+|+.+|+++|+++|++.+|..... . ...|+++++++.||.+++
T Consensus 174 v~igD~~~~di~~A~~~G~~~i~~~~~~~~~~--~-----------~~~~~~~~~~~~el~~~~ 224 (224)
T TIGR02254 174 LMIGDSLTADIKGGQNAGLDTCWMNPDMHPNP--D-----------DIIPTYEIRSLEELYEIL 224 (224)
T ss_pred EEECCCcHHHHHHHHHCCCcEEEECCCCCCCC--C-----------CCCCceEECCHHHHHhhC
Confidence 99999944899999999999999988744321 1 136899999999998865
No 35
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=99.79 E-value=1.2e-19 Score=166.94 Aligned_cols=130 Identities=21% Similarity=0.265 Sum_probs=100.2
Q ss_pred CCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~ 315 (383)
...++++.+.+..+++.|.++ ++||....... . ......+..+++...+.+....+||+|++|+.++++++++|+
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~~~~~~-~---~l~~~~l~~~f~~~~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 167 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNKPTPFVA-P---LLEALGIADYFSVVIGGDSLPNKKPDPAPLLLACEKLGLDPE 167 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-H---HHHHcCCccCccEEEcCCCCCCCCcChHHHHHHHHHcCCChh
Confidence 345789999999999888765 77887654321 1 111112233445555555566789999999999999999999
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
++++|||+ .+|+++|+++|+++|+|.+|..+..+... ..|+++++++.+|..++.
T Consensus 168 ~~i~igD~-~~Di~~a~~~g~~~i~v~~g~~~~~~~~~-----------~~~~~~i~~~~~l~~~l~ 222 (226)
T PRK13222 168 EMLFVGDS-RNDIQAARAAGCPSVGVTYGYNYGEPIAL-----------SEPDVVIDHFAELLPLLG 222 (226)
T ss_pred heEEECCC-HHHHHHHHHCCCcEEEECcCCCCccchhh-----------cCCCEEECCHHHHHHHHH
Confidence 99999999 89999999999999999999765444332 279999999999998875
No 36
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=99.78 E-value=5.9e-19 Score=167.77 Aligned_cols=126 Identities=14% Similarity=0.189 Sum_probs=96.8
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+++..|+++|+++ ++||....... . .+....+..+|+.+...++ .+|+|++|..+++++|++|++
T Consensus 142 ~l~pg~~e~L~~L~~~gi~laIvSn~~~~~~~-~---~L~~~gl~~~F~~vi~~~~---~~~k~~~~~~~l~~~~~~p~~ 214 (273)
T PRK13225 142 QLFPGVADLLAQLRSRSLCLGILSSNSRQNIE-A---FLQRQGLRSLFSVVQAGTP---ILSKRRALSQLVAREGWQPAA 214 (273)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH-H---HHHHcCChhheEEEEecCC---CCCCHHHHHHHHHHhCcChhH
Confidence 45789999999999989876 78887654331 1 1222223444544443332 235678999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
|+||||+ ..|+++|++||+++|+|.+|....+++... .|+++++++.+|.+++.
T Consensus 215 ~l~IGDs-~~Di~aA~~AG~~~I~v~~g~~~~~~l~~~-----------~ad~~i~~~~eL~~~~~ 268 (273)
T PRK13225 215 VMYVGDE-TRDVEAARQVGLIAVAVTWGFNDRQSLVAA-----------CPDWLLETPSDLLQAVT 268 (273)
T ss_pred EEEECCC-HHHHHHHHHCCCeEEEEecCCCCHHHHHHC-----------CCCEEECCHHHHHHHHH
Confidence 9999999 899999999999999999998777666543 79999999999988764
No 37
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=99.77 E-value=5.3e-19 Score=162.68 Aligned_cols=124 Identities=13% Similarity=0.070 Sum_probs=90.0
Q ss_pred ChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHH-HhcCCCccccCCCCHHHHHHHHHHcCCCCCcE
Q psy7233 239 SFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVK-TGAQREPVVIGKPSKLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~-~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~ 317 (383)
.|+++.+.+..|+ ....++||....... ..+....+..+|+ .+...+....+||+|++|+.+++++|++|++|
T Consensus 89 ~~~gv~~~L~~L~--~~~~ivTn~~~~~~~----~~l~~~~l~~~F~~~v~~~~~~~~~KP~p~~~~~a~~~~~~~p~~~ 162 (221)
T PRK10563 89 PIAGANALLESIT--VPMCVVSNGPVSKMQ----HSLGKTGMLHYFPDKLFSGYDIQRWKPDPALMFHAAEAMNVNVENC 162 (221)
T ss_pred cCCCHHHHHHHcC--CCEEEEeCCcHHHHH----HHHHhcChHHhCcceEeeHHhcCCCCCChHHHHHHHHHcCCCHHHe
Confidence 4678888898884 355688987654321 2233344555664 34444446678999999999999999999999
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
+||||+ ..||++|+++|+++|++.++..... .. ..++.+++++.||.+++.
T Consensus 163 l~igDs-~~di~aA~~aG~~~i~~~~~~~~~~-~~------------~~~~~~~~~~~~l~~~~~ 213 (221)
T PRK10563 163 ILVDDS-SAGAQSGIAAGMEVFYFCADPHNKP-ID------------HPLVTTFTDLAQLPELWK 213 (221)
T ss_pred EEEeCc-HhhHHHHHHCCCEEEEECCCCCCcc-hh------------hhhhHHHHHHHHHHHHHH
Confidence 999999 8999999999999999976544321 11 134567888888887653
No 38
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=99.76 E-value=1.7e-18 Score=160.18 Aligned_cols=106 Identities=16% Similarity=0.060 Sum_probs=84.9
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+.+..|+++|+++ ++||....... ..+....+..+|+.+.+.+....+||+|++|+.+++++|++|++
T Consensus 93 ~~~~g~~e~L~~Lk~~g~~~~i~Tn~~~~~~~----~~l~~~~l~~~fd~iv~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 168 (224)
T PRK14988 93 VLREDTVPFLEALKASGKRRILLTNAHPHNLA----VKLEHTGLDAHLDLLLSTHTFGYPKEDQRLWQAVAEHTGLKAER 168 (224)
T ss_pred CcCCCHHHHHHHHHhCCCeEEEEeCcCHHHHH----HHHHHCCcHHHCCEEEEeeeCCCCCCCHHHHHHHHHHcCCChHH
Confidence 45789999999999999775 88886544331 12233346677777777776778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcE-EEEcCCCCCh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQT-LLVLTGDTTM 348 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~t-v~V~~G~~~~ 348 (383)
|+||||+ ..|+++|+++|+++ +.|.++.+..
T Consensus 169 ~l~igDs-~~di~aA~~aG~~~~~~v~~~~~~~ 200 (224)
T PRK14988 169 TLFIDDS-EPILDAAAQFGIRYCLGVTNPDSGI 200 (224)
T ss_pred EEEEcCC-HHHHHHHHHcCCeEEEEEeCCCCCc
Confidence 9999999 78999999999985 6788876543
No 39
>PRK06769 hypothetical protein; Validated
Probab=99.76 E-value=1.6e-17 Score=147.66 Aligned_cols=82 Identities=24% Similarity=0.270 Sum_probs=66.0
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCC
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSS 373 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~s 373 (383)
..+||+|++|..+++++|++|++|+||||+ .+|+.+|+++|+++|+|.+|..... +.... .......|++++++
T Consensus 90 ~~~KP~p~~~~~~~~~l~~~p~~~i~IGD~-~~Di~aA~~aGi~~i~v~~g~~~~~-~~~~~----~~l~~~~~~~~~~~ 163 (173)
T PRK06769 90 ECRKPSTGMLLQAAEKHGLDLTQCAVIGDR-WTDIVAAAKVNATTILVRTGAGYDA-LHTYR----DKWAHIEPNYIAEN 163 (173)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEcCC-HHHHHHHHHCCCeEEEEecCCCchh-hhhhh----cccccCCCcchhhC
Confidence 358999999999999999999999999999 7999999999999999999865421 11000 00013479999999
Q ss_pred HhhHHHhh
Q psy7233 374 LGDMLPFL 381 (383)
Q Consensus 374 l~eL~~~l 381 (383)
+.|+.++|
T Consensus 164 ~~el~~~l 171 (173)
T PRK06769 164 FEDAVNWI 171 (173)
T ss_pred HHHHHHHH
Confidence 99999876
No 40
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=99.75 E-value=3.9e-18 Score=157.16 Aligned_cols=130 Identities=25% Similarity=0.330 Sum_probs=103.4
Q ss_pred CCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 237 HISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
...|+++.+.+..++++....++||....... . .....| +.++|+.+..++..+..||+|.+|+++++++|++|++
T Consensus 98 ~~~~~~~~~~L~~l~~~~~l~ilTNg~~~~~~--~-~l~~~g-l~~~Fd~v~~s~~~g~~KP~~~~f~~~~~~~g~~p~~ 173 (229)
T COG1011 98 LPDYPEALEALKELGKKYKLGILTNGARPHQE--R-KLRQLG-LLDYFDAVFISEDVGVAKPDPEIFEYALEKLGVPPEE 173 (229)
T ss_pred CccChhHHHHHHHHHhhccEEEEeCCChHHHH--H-HHHHcC-ChhhhheEEEecccccCCCCcHHHHHHHHHcCCCcce
Confidence 34578888999999876445699996543331 1 222333 7788888888888889999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
++||||++.+||.+|+++||++|||..+.... .. ....|++.+.++.++.+++.
T Consensus 174 ~l~VgD~~~~di~gA~~~G~~~vwi~~~~~~~---~~---------~~~~~~~~i~~l~~l~~~~~ 227 (229)
T COG1011 174 ALFVGDSLENDILGARALGMKTVWINRGGKPL---PD---------ALEAPDYEISSLAELLDLLE 227 (229)
T ss_pred EEEECCChhhhhHHHHhcCcEEEEECCCCCCC---CC---------CccCCceEEcCHHHHHHHHh
Confidence 99999999999999999999999998864432 10 01379999999999999875
No 41
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=99.75 E-value=2.5e-19 Score=160.42 Aligned_cols=97 Identities=11% Similarity=0.120 Sum_probs=76.6
Q ss_pred hhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEE
Q psy7233 240 FPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLM 319 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~ 319 (383)
++. .+.+..|+++....++||....... ..+....+..+|+.+.+.+....+||+|++|+.+++++|++|++|++
T Consensus 90 ~~~-~e~L~~L~~~~~l~I~T~~~~~~~~----~~l~~~~l~~~fd~i~~~~~~~~~KP~p~~~~~~~~~~~~~~~~~l~ 164 (188)
T PRK10725 90 LPL-IEVVKAWHGRRPMAVGTGSESAIAE----ALLAHLGLRRYFDAVVAADDVQHHKPAPDTFLRCAQLMGVQPTQCVV 164 (188)
T ss_pred ccH-HHHHHHHHhCCCEEEEcCCchHHHH----HHHHhCCcHhHceEEEehhhccCCCCChHHHHHHHHHcCCCHHHeEE
Confidence 454 4778888765455688886554331 23333445667777777777788999999999999999999999999
Q ss_pred EecCchhhHHHHHHcCCcEEEEc
Q psy7233 320 IGDRGNTDIRLGYNNGFQTLLVL 342 (383)
Q Consensus 320 IGDs~~~DI~~A~~aGl~tv~V~ 342 (383)
|||+ ..|+++|+++|+++|+|.
T Consensus 165 igDs-~~di~aA~~aG~~~i~~~ 186 (188)
T PRK10725 165 FEDA-DFGIQAARAAGMDAVDVR 186 (188)
T ss_pred Eecc-HhhHHHHHHCCCEEEeec
Confidence 9999 999999999999999885
No 42
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=99.75 E-value=2.7e-18 Score=155.35 Aligned_cols=102 Identities=14% Similarity=0.159 Sum_probs=82.7
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.+++..|+++|+++ ++||.+..... ..+....+..+|+.+...+.+..+||+|++|..+++++|++|++
T Consensus 92 ~~~~~~~~~L~~L~~~g~~~~i~Sn~~~~~~~----~~l~~~gl~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~p~~ 167 (198)
T TIGR01428 92 PPHPDVPAGLRALKERGYRLAILSNGSPAMLK----SLVKHAGLDDPFDAVLSADAVRAYKPAPQVYQLALEALGVPPDE 167 (198)
T ss_pred CCCCCHHHHHHHHHHCCCeEEEEeCCCHHHHH----HHHHHCCChhhhheeEehhhcCCCCCCHHHHHHHHHHhCCChhh
Confidence 45789999999999988775 88987654331 11222234556676777677788999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
+++|||+ ..|+.+|+++|+++|||..+
T Consensus 168 ~~~vgD~-~~Di~~A~~~G~~~i~v~r~ 194 (198)
T TIGR01428 168 VLFVASN-PWDLGGAKKFGFKTAWVNRP 194 (198)
T ss_pred EEEEeCC-HHHHHHHHHCCCcEEEecCC
Confidence 9999999 69999999999999999875
No 43
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=99.75 E-value=2.6e-17 Score=146.50 Aligned_cols=73 Identities=26% Similarity=0.382 Sum_probs=62.8
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcE-EEEcCCCCChHHHHhcccccchhhcCCCccEEeC
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQT-LLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS 372 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~t-v~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~ 372 (383)
..+||+|++|..+++++|++|++++||||+ .+||++|+++|+.+ ++|.+|....... ...|+++++
T Consensus 103 ~~~KP~p~~~~~a~~~~~~~~~~~v~VGDs-~~Di~aA~~aG~~~~i~v~~g~~~~~~~------------~~~ad~~i~ 169 (176)
T TIGR00213 103 DCRKPKPGMLLQARKELHIDMAQSYMVGDK-LEDMQAGVAAKVKTNVLVRTGKPITPEA------------ENIADWVLN 169 (176)
T ss_pred CCCCCCHHHHHHHHHHcCcChhhEEEEcCC-HHHHHHHHHCCCcEEEEEecCCcccccc------------cccCCEEec
Confidence 458999999999999999999999999999 89999999999998 8999986532221 126999999
Q ss_pred CHhhHHH
Q psy7233 373 SLGDMLP 379 (383)
Q Consensus 373 sl~eL~~ 379 (383)
++.+|.+
T Consensus 170 ~~~el~~ 176 (176)
T TIGR00213 170 SLADLPQ 176 (176)
T ss_pred cHHHhhC
Confidence 9999863
No 44
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=99.73 E-value=1.6e-17 Score=150.74 Aligned_cols=98 Identities=21% Similarity=0.227 Sum_probs=78.9
Q ss_pred CChhhHHHHHHHhhCCCCE-EEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTL-FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~-~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.+++..|+++|.+ .++||.+.... ..+....+..+|+.+.+.+....+||+|++|.++++++|++|++
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~~~~~-----~~l~~~~l~~~fd~i~~s~~~~~~KP~~~~~~~~~~~~~~~~~~ 179 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFDSRLR-----GLLEALGLLEYFDFVVTSYEVGAEKPDPKIFQEALERAGISPEE 179 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCchhHH-----HHHHHCCcHHhcceEEeecccCCCCCCHHHHHHHHHHcCCChhH
Confidence 3578999999999988876 48898764321 12233345566777776666778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEE
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLL 340 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~ 340 (383)
++||||++.+||.+|+++|+++||
T Consensus 180 ~~~IgD~~~~Di~~A~~aG~~~i~ 203 (203)
T TIGR02252 180 ALHIGDSLRNDYQGARAAGWRALL 203 (203)
T ss_pred EEEECCCchHHHHHHHHcCCeeeC
Confidence 999999955899999999999986
No 45
>PRK08942 D,D-heptose 1,7-bisphosphate phosphatase; Validated
Probab=99.73 E-value=1.2e-16 Score=142.93 Aligned_cols=76 Identities=25% Similarity=0.309 Sum_probs=65.6
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCc--cEEe
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVA--DYYL 371 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~p--d~vi 371 (383)
..+||+|.+|..+++++|++|++++||||+ .+|+.+|+++|+.+++|.+|...... .. ..| ++++
T Consensus 100 ~~~KP~p~~~~~~~~~l~~~~~~~~~VgDs-~~Di~~A~~aG~~~i~v~~g~~~~~~-~~-----------~~~~~~~ii 166 (181)
T PRK08942 100 DCRKPKPGMLLSIAERLNIDLAGSPMVGDS-LRDLQAAAAAGVTPVLVRTGKGVTTL-AE-----------GAAPGTWVL 166 (181)
T ss_pred cCCCCCHHHHHHHHHHcCCChhhEEEEeCC-HHHHHHHHHCCCeEEEEcCCCCchhh-hc-----------ccCCCceee
Confidence 358999999999999999999999999999 78999999999999999998654322 21 145 9999
Q ss_pred CCHhhHHHhhh
Q psy7233 372 SSLGDMLPFLS 382 (383)
Q Consensus 372 ~sl~eL~~~l~ 382 (383)
+++.++.+++.
T Consensus 167 ~~l~el~~~l~ 177 (181)
T PRK08942 167 DSLADLPQALK 177 (181)
T ss_pred cCHHHHHHHHH
Confidence 99999998875
No 46
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=99.71 E-value=7.7e-18 Score=185.91 Aligned_cols=123 Identities=14% Similarity=0.110 Sum_probs=98.5
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcE
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~ 317 (383)
.|+++.+.+..|+++|+++ |+||....... ..+...+.. ..+|+.+...+....+||+|++|+++++++|+.|++|
T Consensus 162 ~~pG~~elL~~Lk~~G~~l~IvSn~~~~~~~-~~L~~~gl~--~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~ 238 (1057)
T PLN02919 162 GFPGALELITQCKNKGLKVAVASSADRIKVD-ANLAAAGLP--LSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSEC 238 (1057)
T ss_pred cCccHHHHHHHHHhCCCeEEEEeCCcHHHHH-HHHHHcCCC--hhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccE
Confidence 5789999999999999886 88887665431 111122221 3456777777777789999999999999999999999
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhH
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDM 377 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL 377 (383)
++|||+ ..|+++|+++||++|+|.+|. ..+++... .|+++++++.++
T Consensus 239 v~IgDs-~~Di~AA~~aGm~~I~v~~~~-~~~~L~~~-----------~a~~vi~~l~el 285 (1057)
T PLN02919 239 VVIEDA-LAGVQAARAAGMRCIAVTTTL-SEEILKDA-----------GPSLIRKDIGNI 285 (1057)
T ss_pred EEEcCC-HHHHHHHHHcCCEEEEECCCC-CHHHHhhC-----------CCCEEECChHHC
Confidence 999999 899999999999999999985 45555543 799999999986
No 47
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=99.71 E-value=1.6e-17 Score=148.19 Aligned_cols=98 Identities=18% Similarity=0.156 Sum_probs=78.3
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.+.|+.|+++|+++ ++||.... . ..+....+..+|+...+.+....+||+|++|..+++++|++|++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~~~-~-----~~l~~~~l~~~f~~~~~~~~~~~~kp~p~~~~~~~~~~~~~~~~ 160 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASKNA-P-----TVLEKLGLIDYFDAIVDPAEIKKGKPDPEIFLAAAEGLGVSPSE 160 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCccH-H-----HHHHhcCcHhhCcEEEehhhcCCCCCChHHHHHHHHHcCCCHHH
Confidence 35789999999999888876 66764321 1 12233345566666666666778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEc
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVL 342 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~ 342 (383)
++||||+ .+|+++|+++|+++|+|+
T Consensus 161 ~v~vgD~-~~di~aA~~aG~~~i~v~ 185 (185)
T TIGR01990 161 CIGIEDA-QAGIEAIKAAGMFAVGVG 185 (185)
T ss_pred eEEEecC-HHHHHHHHHcCCEEEecC
Confidence 9999999 899999999999999874
No 48
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=99.71 E-value=4.5e-17 Score=148.76 Aligned_cols=112 Identities=16% Similarity=0.158 Sum_probs=85.4
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+.+..|+++|+++ ++||....... .. .......+..+|+.+..++....+||+|++|+.+++++|++|++
T Consensus 94 ~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~~~~-~~-~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~g~~~~~ 171 (211)
T TIGR02247 94 KLRPSMMAAIKTLRAKGFKTACITNNFPTDHS-AE-EALLPGDIMALFDAVVESCLEGLRKPDPRIYQLMLERLGVAPEE 171 (211)
T ss_pred ccChhHHHHHHHHHHCCCeEEEEeCCCCccch-hh-hHhhhhhhHhhCCEEEEeeecCCCCCCHHHHHHHHHHcCCCHHH
Confidence 35789999999999888775 77886443210 01 11122235566776666666677899999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHH
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAI 352 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~ 352 (383)
|+||||+ ..|+.+|+++|+++|+|.++....+++.
T Consensus 172 ~l~i~D~-~~di~aA~~aG~~~i~v~~~~~~~~~l~ 206 (211)
T TIGR02247 172 CVFLDDL-GSNLKPAAALGITTIKVSDEEQAIHDLE 206 (211)
T ss_pred eEEEcCC-HHHHHHHHHcCCEEEEECCHHHHHHHHH
Confidence 9999999 9999999999999999987644444444
No 49
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=99.71 E-value=1.4e-17 Score=148.61 Aligned_cols=98 Identities=11% Similarity=0.136 Sum_probs=78.7
Q ss_pred CCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~ 315 (383)
...|+++.+++..|+++|.++ ++||. .. . . ..+....+..+++.+.+.+....+||+|++|.++++++|++|+
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~-~~-~---~-~~l~~~~l~~~f~~v~~~~~~~~~kp~~~~~~~~~~~~~~~~~ 160 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS-KN-A---D-RILAKLGLTDYFDAIVDADEVKEGKPHPETFLLAAELLGVSPN 160 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc-hh-H---H-HHHHHcChHHHCCEeeehhhCCCCCCChHHHHHHHHHcCCCHH
Confidence 345889999999999888876 66765 21 1 1 2233344556677676666677899999999999999999999
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEE
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLV 341 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V 341 (383)
++++|||+ ..|+++|+++|+++|+|
T Consensus 161 ~~v~IgD~-~~di~aA~~~G~~~i~v 185 (185)
T TIGR02009 161 ECVVFEDA-LAGVQAARAAGMFAVAV 185 (185)
T ss_pred HeEEEeCc-HhhHHHHHHCCCeEeeC
Confidence 99999999 89999999999999975
No 50
>KOG3085|consensus
Probab=99.70 E-value=7.5e-17 Score=148.06 Aligned_cols=105 Identities=20% Similarity=0.214 Sum_probs=85.6
Q ss_pred hhHHHHHHHhhCCCCE-EEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEE
Q psy7233 241 PKLMKAACYLTNPNTL-FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLM 319 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~-~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~ 319 (383)
+..++++..++++|.. .+.||.|..... ......+..+|+.+..+...+.-||+|.+|++|++++|+.|++|++
T Consensus 116 ~~~~~~lq~lR~~g~~l~iisN~d~r~~~-----~l~~~~l~~~fD~vv~S~e~g~~KPDp~If~~al~~l~v~Pee~vh 190 (237)
T KOG3085|consen 116 DGMQELLQKLRKKGTILGIISNFDDRLRL-----LLLPLGLSAYFDFVVESCEVGLEKPDPRIFQLALERLGVKPEECVH 190 (237)
T ss_pred cHHHHHHHHHHhCCeEEEEecCCcHHHHH-----HhhccCHHHhhhhhhhhhhhccCCCChHHHHHHHHHhCCChHHeEE
Confidence 5577999999999944 588998887652 2233344567776666666788999999999999999999999999
Q ss_pred EecCchhhHHHHHHcCCcEEEEcCCCCChHH
Q psy7233 320 IGDRGNTDIRLGYNNGFQTLLVLTGDTTMEK 350 (383)
Q Consensus 320 IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~ 350 (383)
|||++.+|+++|+++|+++++|-++.....+
T Consensus 191 IgD~l~nD~~gA~~~G~~ailv~~~~~~~~~ 221 (237)
T KOG3085|consen 191 IGDLLENDYEGARNLGWHAILVDNSITALKE 221 (237)
T ss_pred ecCccccccHhHHHcCCEEEEEccccchhhh
Confidence 9999999999999999999999876554444
No 51
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=99.70 E-value=5.1e-17 Score=165.63 Aligned_cols=124 Identities=17% Similarity=0.208 Sum_probs=96.4
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+.|+.|+++|+++ ++||....... ..+....+..+|+...+.+.. .+||+|++|..++++++ |++
T Consensus 330 ~l~pG~~e~L~~Lk~~g~~l~IvS~~~~~~~~----~~l~~~~l~~~f~~i~~~d~v-~~~~kP~~~~~al~~l~--~~~ 402 (459)
T PRK06698 330 ALYPNVKEIFTYIKENNCSIYIASNGLTEYLR----AIVSYYDLDQWVTETFSIEQI-NSLNKSDLVKSILNKYD--IKE 402 (459)
T ss_pred CcCCCHHHHHHHHHHCCCeEEEEeCCchHHHH----HHHHHCCcHhhcceeEecCCC-CCCCCcHHHHHHHHhcC--cce
Confidence 45899999999999988876 88887665442 223334455666666665543 35788899999999875 799
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
|++|||+ .+|+.+|++||+.+|+|.+|.....+. ..||++++++.++.+++.
T Consensus 403 ~v~VGDs-~~Di~aAk~AG~~~I~v~~~~~~~~~~-------------~~~d~~i~~l~el~~~l~ 454 (459)
T PRK06698 403 AAVVGDR-LSDINAAKDNGLIAIGCNFDFAQEDEL-------------AQADIVIDDLLELKGILS 454 (459)
T ss_pred EEEEeCC-HHHHHHHHHCCCeEEEEeCCCCccccc-------------CCCCEEeCCHHHHHHHHH
Confidence 9999999 799999999999999999986544332 268999999999998764
No 52
>PF13242 Hydrolase_like: HAD-hyrolase-like; PDB: 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A 2HX1_D 2X4D_A 3HLT_C 3L1U_B ....
Probab=99.68 E-value=1.1e-16 Score=122.33 Aligned_cols=74 Identities=31% Similarity=0.453 Sum_probs=68.2
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCH
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSL 374 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl 374 (383)
+|||+|.+|..++++++++|++++||||++.+||.+|+++|+.+|+|.+|.++.+++... ...|||++++|
T Consensus 2 ~gKP~p~~~~~a~~~~~~~~~~~~~VGD~~~~Di~~a~~~G~~~ilV~tG~~~~~~~~~~---------~~~pd~vv~~l 72 (75)
T PF13242_consen 2 CGKPSPGMLEQALKRLGVDPSRCVMVGDSLETDIEAAKAAGIDTILVLTGVYSPEDLEKA---------EHKPDYVVDDL 72 (75)
T ss_dssp CSTTSHHHHHHHHHHHTSGGGGEEEEESSTTTHHHHHHHTTSEEEEESSSSSCCCGHHHS---------SSTTSEEESSG
T ss_pred CCCCcHHHHHHHHHHcCCCHHHEEEEcCCcHhHHHHHHHcCCcEEEECCCCCCHHHHhcc---------CCCCCEEECCH
Confidence 699999999999999999999999999999999999999999999999998887776642 35899999999
Q ss_pred hhH
Q psy7233 375 GDM 377 (383)
Q Consensus 375 ~eL 377 (383)
.|+
T Consensus 73 ~e~ 75 (75)
T PF13242_consen 73 KEA 75 (75)
T ss_dssp GGH
T ss_pred HhC
Confidence 986
No 53
>PHA02597 30.2 hypothetical protein; Provisional
Probab=99.68 E-value=3.7e-17 Score=147.81 Aligned_cols=120 Identities=10% Similarity=0.065 Sum_probs=84.9
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHH-HHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMV-AAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..|+++.+++..|++++..+++||...... ......++...++ .+|+.+.+.+ ..||+|++|..+++++| |++
T Consensus 74 ~~~pG~~e~L~~L~~~~~~~i~Tn~~~~~~-~~~~~~~~l~~~f~~~f~~i~~~~---~~~~kp~~~~~a~~~~~--~~~ 147 (197)
T PHA02597 74 SAYDDALDVINKLKEDYDFVAVTALGDSID-ALLNRQFNLNALFPGAFSEVLMCG---HDESKEKLFIKAKEKYG--DRV 147 (197)
T ss_pred cCCCCHHHHHHHHHhcCCEEEEeCCccchh-HHHHhhCCHHHhCCCcccEEEEec---cCcccHHHHHHHHHHhC--CCc
Confidence 358899999999988776677787654322 1011122222111 1233333333 25888999999999999 899
Q ss_pred EEEEecCchhhHHHHHHc--CCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHH
Q psy7233 317 TLMIGDRGNTDIRLGYNN--GFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLP 379 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~a--Gl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~ 379 (383)
+++|||+ ..|+.+|++| |+++|+|.+|.. + . ...|+|.+.|+.|+..
T Consensus 148 ~v~vgDs-~~di~aA~~a~~Gi~~i~~~~~~~---~--~----------~~~~~~~~~~~~~~~~ 196 (197)
T PHA02597 148 VCFVDDL-AHNLDAAHEALSQLPVIHMLRGER---D--H----------IPKLAHRVKSWNDIEN 196 (197)
T ss_pred EEEeCCC-HHHHHHHHHHHcCCcEEEecchhh---c--c----------ccchhhhhccHHHHhc
Confidence 9999999 9999999999 999999999843 1 1 2267799999999864
No 54
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=99.67 E-value=5.5e-16 Score=140.53 Aligned_cols=109 Identities=16% Similarity=0.153 Sum_probs=86.7
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCcccc-CcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVP-GTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~-~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
.|+++.++++.++++|.++ ++||....... ... ....+..+|+.+...+....+||+|++|+.+++++|++|++
T Consensus 85 ~~~g~~e~L~~l~~~g~~~~i~Sn~~~~~~~----~~~~~~~~l~~~fd~v~~s~~~~~~KP~p~~~~~~~~~~~~~p~~ 160 (199)
T PRK09456 85 LRPEVIAIMHKLREQGHRVVVLSNTNRLHTT----FWPEEYPEVRAAADHIYLSQDLGMRKPEARIYQHVLQAEGFSAAD 160 (199)
T ss_pred cCHHHHHHHHHHHhCCCcEEEEcCCchhhHH----HHHhhchhHHHhcCEEEEecccCCCCCCHHHHHHHHHHcCCChhH
Confidence 4789999999999888765 88887543220 111 11235566777777777888999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHH
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAI 352 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~ 352 (383)
|++|||+ ..|+.+|+++|++++++.++....+.+.
T Consensus 161 ~l~vgD~-~~di~aA~~aG~~~i~~~~~~~~~~~l~ 195 (199)
T PRK09456 161 AVFFDDN-ADNIEAANALGITSILVTDKQTIPDYFA 195 (199)
T ss_pred eEEeCCC-HHHHHHHHHcCCEEEEecCCccHHHHHH
Confidence 9999999 7899999999999999988766655554
No 55
>PLN02811 hydrolase
Probab=99.65 E-value=2.8e-16 Score=144.77 Aligned_cols=124 Identities=19% Similarity=0.192 Sum_probs=96.2
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCC--ccccCCCCHHHHHHHHHHcC---
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQRE--PVVIGKPSKLIGSYLIEKYN--- 311 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~gKP~p~~~~~al~~lg--- 311 (383)
..|+++.++++.|+++|+++ ++||....... . .......+..+|+.+...+ ....+||+|++|..+++++|
T Consensus 78 ~l~~gv~e~l~~L~~~g~~~~i~S~~~~~~~~--~-~~~~~~~l~~~f~~i~~~~~~~~~~~KP~p~~~~~a~~~~~~~~ 154 (220)
T PLN02811 78 DLMPGAERLVRHLHAKGIPIAIATGSHKRHFD--L-KTQRHGELFSLMHHVVTGDDPEVKQGKPAPDIFLAAARRFEDGP 154 (220)
T ss_pred CCCccHHHHHHHHHHCCCcEEEEeCCchhhHH--H-HHcccHHHHhhCCEEEECChhhccCCCCCcHHHHHHHHHhCCCC
Confidence 35789999999999988876 77876543221 0 1222334566776666666 56778999999999999996
Q ss_pred CCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHH
Q psy7233 312 LNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDML 378 (383)
Q Consensus 312 i~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~ 378 (383)
++|++|+||||+ ..|+++|+++|+++|+|.+|..+..... .|+++++++.++.
T Consensus 155 ~~~~~~v~IgDs-~~di~aA~~aG~~~i~v~~~~~~~~~~~-------------~~d~vi~~~~e~~ 207 (220)
T PLN02811 155 VDPGKVLVFEDA-PSGVEAAKNAGMSVVMVPDPRLDKSYCK-------------GADQVLSSLLDFK 207 (220)
T ss_pred CCccceEEEecc-HhhHHHHHHCCCeEEEEeCCCCcHhhhh-------------chhhHhcCHhhCC
Confidence 999999999999 8999999999999999998865543321 6899999998764
No 56
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=99.63 E-value=2.7e-15 Score=129.67 Aligned_cols=49 Identities=24% Similarity=0.480 Sum_probs=46.9
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
..||+|++|+.+++++|++|++|+||||+ ..|+++|+++|+++|||..|
T Consensus 99 ~~KP~~~~~~~~~~~~~~~~~e~i~IGDs-~~Di~~A~~~Gi~~v~i~~~ 147 (147)
T TIGR01656 99 CRKPKPGLILEALKRLGVDASRSLVVGDR-LRDLQAARNAGLAAVLLVDG 147 (147)
T ss_pred CCCCCHHHHHHHHHHcCCChHHEEEEcCC-HHHHHHHHHCCCCEEEecCC
Confidence 46999999999999999999999999999 99999999999999999875
No 57
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=99.62 E-value=2.1e-15 Score=134.89 Aligned_cols=97 Identities=19% Similarity=0.169 Sum_probs=76.2
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCcccc----CCCCHHHHHHHHHHcCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVI----GKPSKLIGSYLIEKYNLN 313 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----gKP~p~~~~~al~~lgi~ 313 (383)
..++++.++++.|+ +...++||....... ..+....+..+|+.+...+.... .||+|++|+.+++++|+.
T Consensus 84 ~~~~g~~~~L~~L~--~~~~i~Tn~~~~~~~----~~l~~~gl~~~fd~i~~~~~~~~~~~~~KP~p~~~~~~~~~~~~~ 157 (184)
T TIGR01993 84 KPDPELRNLLLRLP--GRKIIFTNGDRAHAR----RALNRLGIEDCFDGIFCFDTANPDYLLPKPSPQAYEKALREAGVD 157 (184)
T ss_pred CCCHHHHHHHHhCC--CCEEEEeCCCHHHHH----HHHHHcCcHhhhCeEEEeecccCccCCCCCCHHHHHHHHHHhCCC
Confidence 35788999999997 456788997765331 22222234566766666555555 599999999999999999
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcEEEE
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQTLLV 341 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~tv~V 341 (383)
|++++||||+ ..||++|+++|+++|+|
T Consensus 158 ~~~~l~vgD~-~~di~aA~~~G~~~i~v 184 (184)
T TIGR01993 158 PERAIFFDDS-ARNIAAAKALGMKTVLV 184 (184)
T ss_pred ccceEEEeCC-HHHHHHHHHcCCEEeeC
Confidence 9999999999 78999999999999986
No 58
>TIGR01662 HAD-SF-IIIA HAD-superfamily hydrolase, subfamily IIIA. In the case of histidinol phosphatase and PNK-3'-phosphatase, this model represents a domain of a bifunctional system. In the histidinol phosphatase HisB, a C-terminal domain is an imidazoleglycerol-phosphate dehydratase which catalyzes a related step in histidine biosynthesis. In PNK-3'-phosphatase, N- and C-terminal domains constitute the polynucleotide kinase and DNA-binding components of the enzyme.
Probab=99.62 E-value=6.8e-15 Score=124.47 Aligned_cols=48 Identities=23% Similarity=0.448 Sum_probs=44.4
Q ss_pred cCCCCHHHHHHHHHHc-CCCCCcEEEEecCchhhHHHHHHcCCcEEEEc
Q psy7233 295 IGKPSKLIGSYLIEKY-NLNPERTLMIGDRGNTDIRLGYNNGFQTLLVL 342 (383)
Q Consensus 295 ~gKP~p~~~~~al~~l-gi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~ 342 (383)
..||+|++|+.+++++ +++|++++||||+...|+.+|+++|+.+|+|+
T Consensus 83 ~~KP~~~~~~~~~~~~~~~~~~~~v~IGD~~~~Di~~A~~~Gi~~i~~~ 131 (132)
T TIGR01662 83 CRKPKPGMFLEALKRFNEIDPEESVYVGDQDLTDLQAAKRAGLAFILVA 131 (132)
T ss_pred CCCCChHHHHHHHHHcCCCChhheEEEcCCCcccHHHHHHCCCeEEEee
Confidence 3699999999999999 59999999999933999999999999999985
No 59
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=99.61 E-value=3.2e-16 Score=139.14 Aligned_cols=98 Identities=20% Similarity=0.213 Sum_probs=77.4
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.+.++.|+++|+++ ++||..... . .......+..+|+.+...+....+||+|++|+.+++++|++|++
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~-~----~~~~~~~l~~~f~~i~~~~~~~~~KP~~~~~~~~~~~~~~~~~~ 159 (183)
T TIGR01509 85 KPLPGVEPLLEALRARGKKLALLTNSPRDH-A----VLVQELGLRDLFDVVIFSGDVGRGKPDPDIYLLALKKLGLKPEE 159 (183)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCCchHH-H----HHHHhcCCHHHCCEEEEcCCCCCCCCCHHHHHHHHHHcCCCcce
Confidence 44788999999999888765 888876543 1 11111234455666555555678999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEE
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLV 341 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V 341 (383)
+++|||+ ..|+.+|+++|+.+|+|
T Consensus 160 ~~~vgD~-~~di~aA~~~G~~~i~v 183 (183)
T TIGR01509 160 CLFVDDS-PAGIEAAKAAGMHTVLV 183 (183)
T ss_pred EEEEcCC-HHHHHHHHHcCCEEEeC
Confidence 9999999 78999999999999975
No 60
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=99.57 E-value=4.1e-14 Score=125.32 Aligned_cols=56 Identities=27% Similarity=0.167 Sum_probs=51.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHH
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKA 351 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~ 351 (383)
.||+|++|..+++++|++|++++||||++.+|+.+|+++|+.+|+|.+|.++.+.+
T Consensus 90 ~KP~p~~~~~~l~~~~~~~~~~l~IGDs~~~Di~aA~~aGi~~i~v~~g~~~~~~~ 145 (170)
T TIGR01668 90 VKPPGCAFRRAHPEMGLTSEQVAVVGDRLFTDVMGGNRNGSYTILVEPLVHPDQWF 145 (170)
T ss_pred CCCChHHHHHHHHHcCCCHHHEEEECCcchHHHHHHHHcCCeEEEEccCcCCcccc
Confidence 69999999999999999999999999995589999999999999999997765543
No 61
>COG2179 Predicted hydrolase of the HAD superfamily [General function prediction only]
Probab=99.56 E-value=2e-14 Score=123.34 Aligned_cols=49 Identities=33% Similarity=0.411 Sum_probs=47.2
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcC
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLT 343 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~ 343 (383)
++||.+..|..|++.++++|++|+||||++.|||.+|+.+|++||+|..
T Consensus 91 A~KP~~~~fr~Al~~m~l~~~~vvmVGDqL~TDVlggnr~G~~tIlV~P 139 (175)
T COG2179 91 AKKPFGRAFRRALKEMNLPPEEVVMVGDQLFTDVLGGNRAGMRTILVEP 139 (175)
T ss_pred ccCccHHHHHHHHHHcCCChhHEEEEcchhhhhhhcccccCcEEEEEEE
Confidence 4899999999999999999999999999999999999999999999965
No 62
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=99.56 E-value=5e-15 Score=134.01 Aligned_cols=88 Identities=15% Similarity=0.009 Sum_probs=67.0
Q ss_pred hhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEE
Q psy7233 241 PKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLM 319 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~ 319 (383)
+...++++.|+++|+++ ++||....... ..+....+..+|+.+.+.+.... ||+|++|..+++++|++|++|+|
T Consensus 109 ~~~~~~L~~l~~~g~~~~i~T~~~~~~~~----~~l~~~gl~~~f~~~~~~~~~~~-KP~p~~~~~~~~~~~~~~~~~i~ 183 (197)
T TIGR01548 109 LTPKGLLRELHRAPKGMAVVTGRPRKDAA----KFLTTHGLEILFPVQIWMEDCPP-KPNPEPLILAAKALGVEACHAAM 183 (197)
T ss_pred cCHHHHHHHHHHcCCcEEEECCCCHHHHH----HHHHHcCchhhCCEEEeecCCCC-CcCHHHHHHHHHHhCcCcccEEE
Confidence 33478889998888775 88887654331 22233334566666666665555 99999999999999999999999
Q ss_pred EecCchhhHHHHHHc
Q psy7233 320 IGDRGNTDIRLGYNN 334 (383)
Q Consensus 320 IGDs~~~DI~~A~~a 334 (383)
|||+ .+||.+|+++
T Consensus 184 vGD~-~~Di~aA~~a 197 (197)
T TIGR01548 184 VGDT-VDDIITGRKA 197 (197)
T ss_pred EeCC-HHHHHHHHhC
Confidence 9999 8999999975
No 63
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=99.55 E-value=2.5e-15 Score=131.33 Aligned_cols=99 Identities=18% Similarity=0.206 Sum_probs=77.9
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++++.+.+..|+++|.++ ++||.+..... ..+....+..+++.....+.....||+|++|..+++++|++|++
T Consensus 77 ~~~~~~~~~L~~l~~~~~~~~i~Sn~~~~~~~----~~l~~~~~~~~f~~i~~~~~~~~~Kp~~~~~~~~~~~~~~~p~~ 152 (176)
T PF13419_consen 77 QPYPGVRELLERLKAKGIPLVIVSNGSRERIE----RVLERLGLDDYFDEIISSDDVGSRKPDPDAYRRALEKLGIPPEE 152 (176)
T ss_dssp EESTTHHHHHHHHHHTTSEEEEEESSEHHHHH----HHHHHTTHGGGCSEEEEGGGSSSSTTSHHHHHHHHHHHTSSGGG
T ss_pred chhhhhhhhhhhcccccceeEEeecCCccccc----ccccccccccccccccccchhhhhhhHHHHHHHHHHHcCCCcce
Confidence 34788999999999778776 77887554321 12222233355555666666778999999999999999999999
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEE
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLV 341 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V 341 (383)
+++|||+ ..|+.+|+++|+.+|+|
T Consensus 153 ~~~vgD~-~~d~~~A~~~G~~~i~v 176 (176)
T PF13419_consen 153 ILFVGDS-PSDVEAAKEAGIKTIWV 176 (176)
T ss_dssp EEEEESS-HHHHHHHHHTTSEEEEE
T ss_pred EEEEeCC-HHHHHHHHHcCCeEEeC
Confidence 9999999 59999999999999987
No 64
>KOG2914|consensus
Probab=99.53 E-value=4.4e-14 Score=129.26 Aligned_cols=124 Identities=21% Similarity=0.171 Sum_probs=87.9
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhc--CCCccccCCCCHHHHHHHHHHcCCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGA--QREPVVIGKPSKLIGSYLIEKYNLNP 314 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~~gKP~p~~~~~al~~lgi~p 314 (383)
...+++...+..|+++|+++ ++|+.++.... . ..-....++..|.... +...+..|||+|++|..|++++|..|
T Consensus 92 ~~~PGa~kLv~~L~~~gip~alat~s~~~~~~-~--k~~~~~~~~~~f~~~v~~d~~~v~~gKP~Pdi~l~A~~~l~~~~ 168 (222)
T KOG2914|consen 92 ILMPGAEKLVNHLKNNGIPVALATSSTSASFE-L--KISRHEDIFKNFSHVVLGDDPEVKNGKPDPDIYLKAAKRLGVPP 168 (222)
T ss_pred ccCCcHHHHHHHHHhCCCCeeEEecCCcccHH-H--HHHHhhHHHHhcCCCeecCCccccCCCCCchHHHHHHHhcCCCC
Confidence 34568888999999999887 77776443321 0 1122333444444332 24447789999999999999999998
Q ss_pred -CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHH
Q psy7233 315 -ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDML 378 (383)
Q Consensus 315 -~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~ 378 (383)
+.|++|+|+ ...+++|++|||++|+|.+..-.... ...++.+++++.+..
T Consensus 169 ~~k~lVfeds-~~Gv~aa~aagm~vi~v~~~~~~~~~-------------~~~~~~~~~~~~~~~ 219 (222)
T KOG2914|consen 169 PSKCLVFEDS-PVGVQAAKAAGMQVVGVATPDLSNLF-------------SAGATLILESLEDFK 219 (222)
T ss_pred ccceEEECCC-HHHHHHHHhcCCeEEEecCCCcchhh-------------hhccceecccccccC
Confidence 999999999 88899999999999999883222111 126777777776543
No 65
>TIGR01261 hisB_Nterm histidinol-phosphatase. This model describes histidinol phosphatase. All known examples in the scope of this model are bifunctional proteins with a histidinol phosphatase domain followed by an imidazoleglycerol-phosphate dehydratase domain. These enzymatic domains catalyze the ninth and seventh steps, respectively, of histidine biosynthesis.
Probab=99.51 E-value=2.8e-13 Score=118.88 Aligned_cols=56 Identities=23% Similarity=0.313 Sum_probs=50.8
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHH
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEK 350 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~ 350 (383)
...||+|.+|..+++++|++|++++||||+ .+|+.+|+++|+++++|.+|..+-+.
T Consensus 100 ~~~KP~~~~~~~~~~~~~~~~~e~l~IGD~-~~Di~~A~~aGi~~i~~~~~~~~~~~ 155 (161)
T TIGR01261 100 DCRKPKIKLLEPYLKKNLIDKARSYVIGDR-ETDMQLAENLGIRGIQYDEEELNWDM 155 (161)
T ss_pred CCCCCCHHHHHHHHHHcCCCHHHeEEEeCC-HHHHHHHHHCCCeEEEEChhhcCHHH
Confidence 357999999999999999999999999999 99999999999999999998554333
No 66
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=99.49 E-value=1.3e-13 Score=126.99 Aligned_cols=105 Identities=10% Similarity=0.026 Sum_probs=77.3
Q ss_pred CCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~ 315 (383)
...|+++.+.|+.++++|+++ |+||.+..... ......+.+.+..+++..... ...+||+|++|..+++++|++|+
T Consensus 94 ~~lypgv~e~L~~Lk~~G~~l~I~Sn~s~~~~~-~~~~~~~~~~L~~~f~~~fd~--~~g~KP~p~~y~~i~~~lgv~p~ 170 (220)
T TIGR01691 94 SHLYPDVPPALEAWLQLGLRLAVYSSGSVPAQK-LLFGHSDAGNLTPYFSGYFDT--TVGLKTEAQSYVKIAGQLGSPPR 170 (220)
T ss_pred cCcCcCHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHhhccccchhhhcceEEEe--CcccCCCHHHHHHHHHHhCcChh
Confidence 346899999999999999875 88887543221 000011112344444433321 23479999999999999999999
Q ss_pred cEEEEecCchhhHHHHHHcCCcEEEEcCCC
Q psy7233 316 RTLMIGDRGNTDIRLGYNNGFQTLLVLTGD 345 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~ 345 (383)
++++|||+ ..|+++|++||+++++|.++.
T Consensus 171 e~lfVgDs-~~Di~AA~~AG~~ti~v~r~g 199 (220)
T TIGR01691 171 EILFLSDI-INELDAARKAGLHTGQLVRPG 199 (220)
T ss_pred HEEEEeCC-HHHHHHHHHcCCEEEEEECCC
Confidence 99999999 999999999999999997653
No 67
>PRK10530 pyridoxal phosphate (PLP) phosphatase; Provisional
Probab=99.48 E-value=8.6e-13 Score=124.92 Aligned_cols=57 Identities=16% Similarity=0.307 Sum_probs=48.3
Q ss_pred CCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|+||+||||++. +.+.|...+++++++++|+.++++|+ |+...+.+.++.+|++
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~~~~~G~~~~iaTG---R~~~~~~~~~~~l~~~ 60 (272)
T PRK10530 3 YRVIALDLDGTLLTPKKTILPESLEALARAREAGYKVIIVTG---RHHVAIHPFYQALALD 60 (272)
T ss_pred ccEEEEeCCCceECCCCccCHHHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHhcCCC
Confidence 689999999999987 46789999999999999999999999 4555566666667764
No 68
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=99.48 E-value=6.7e-13 Score=117.09 Aligned_cols=46 Identities=28% Similarity=0.509 Sum_probs=42.2
Q ss_pred cCCCCHHHHHHHHHHcC--CCCCcEEEEecCc-------hhhHHHHHHcCCcEEE
Q psy7233 295 IGKPSKLIGSYLIEKYN--LNPERTLMIGDRG-------NTDIRLGYNNGFQTLL 340 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lg--i~p~e~l~IGDs~-------~~DI~~A~~aGl~tv~ 340 (383)
..||+|.+|+.+++++| ++|++++||||+. .+|+++|+++|+++++
T Consensus 106 ~~KP~p~~~~~~~~~~~~~~~~~~~v~VGD~~~~~~~~~~~Di~aA~~aGi~~~~ 160 (166)
T TIGR01664 106 YRKPMTGMWEYLQSQYNSPIKMTRSFYVGDAAGRKLDFSDADIKFAKNLGLEFKY 160 (166)
T ss_pred CCCCccHHHHHHHHHcCCCCCchhcEEEECCCCCCCCCchhHHHHHHHCCCCcCC
Confidence 37999999999999999 9999999999993 3799999999999875
No 69
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=99.47 E-value=5e-14 Score=122.04 Aligned_cols=88 Identities=17% Similarity=0.107 Sum_probs=68.1
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEE
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTL 318 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l 318 (383)
++++.+++..|+++|+++ ++||....... ...... +..++..+.+.+... +||+|++|.++++++|++| +|+
T Consensus 66 ~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~----~~~~~~-l~~~f~~i~~~~~~~-~Kp~~~~~~~~~~~~~~~~-~~l 138 (154)
T TIGR01549 66 IRGAADLLKRLKEAGIKLGIISNGSLRAQK----LLLRKH-LGDYFDLILGSDEFG-AKPEPEIFLAALESLGLPP-EVL 138 (154)
T ss_pred ccCHHHHHHHHHHCcCeEEEEeCCchHHHH----HHHHHH-HHhcCcEEEecCCCC-CCcCHHHHHHHHHHcCCCC-CEE
Confidence 467899999998888775 88887654331 112222 445555555555555 8999999999999999999 999
Q ss_pred EEecCchhhHHHHHHcC
Q psy7233 319 MIGDRGNTDIRLGYNNG 335 (383)
Q Consensus 319 ~IGDs~~~DI~~A~~aG 335 (383)
+|||+ ..|+++|+++|
T Consensus 139 ~iGDs-~~Di~aa~~aG 154 (154)
T TIGR01549 139 HVGDN-LNDIEGARNAG 154 (154)
T ss_pred EEeCC-HHHHHHHHHcc
Confidence 99999 99999999998
No 70
>TIGR01493 HAD-SF-IA-v2 Haloacid dehalogenase superfamily, subfamily IA, variant 2 with 3rd motif like haloacid dehalogenase. The Subfamily IA and IB capping domains are predicted by PSI-PRED to consist of an alpha helical bundle. Subfamily I encompasses such a wide region of sequence space (the sequences are highly divergent) that modelling it with a single alignment is impossible, resulting in an overly broad description which allows in many unrelated sequences. Subfamily IA and IB are separated based on an aparrent phylogenetic bifurcation. Subfamily IA is still too broad to model, but cannot be further subdivided into large chunks based on phylogenetic trees. Of the three motifs defining the HAD superfamily, the third has three variant forms : (1) hhhhsDxxx(x)D, (2) hhhhssxxx(x)D and (3) hhhhDDxxx(x)s where _s_ refers to a small amino acid and _h_ to a hydrophobic one. All three of these variants are found in subfamily IA. Individual models were made based on seeds exhibiting only o
Probab=99.46 E-value=5.2e-14 Score=124.55 Aligned_cols=86 Identities=14% Similarity=0.138 Sum_probs=65.2
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcE
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~ 317 (383)
..|+++.++|.. ..++||.+..... ..+....+..+++.+...+.+..+||+|++|+.+++++|++|++|
T Consensus 90 ~~~~g~~~~L~~------~~i~Tn~~~~~~~----~~l~~~~l~~~fd~v~~~~~~~~~KP~p~~f~~~~~~~~~~p~~~ 159 (175)
T TIGR01493 90 PPWPDSAAALAR------VAILSNASHWAFD----QFAQQAGLPWYFDRAFSVDTVRAYKPDPVVYELVFDTVGLPPDRV 159 (175)
T ss_pred CCCCchHHHHHH------HhhhhCCCHHHHH----HHHHHCCCHHHHhhhccHhhcCCCCCCHHHHHHHHHHHCCCHHHe
Confidence 356777777763 3488997765442 122223345566666666667789999999999999999999999
Q ss_pred EEEecCchhhHHHHHHc
Q psy7233 318 LMIGDRGNTDIRLGYNN 334 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~a 334 (383)
+||||+ ..||.+|+++
T Consensus 160 l~vgD~-~~Di~~A~~~ 175 (175)
T TIGR01493 160 LMVAAH-QWDLIGARKF 175 (175)
T ss_pred EeEecC-hhhHHHHhcC
Confidence 999999 8999999874
No 71
>cd01427 HAD_like Haloacid dehalogenase-like hydrolases. The haloacid dehalogenase-like (HAD) superfamily includes L-2-haloacid dehalogenase, epoxide hydrolase, phosphoserine phosphatase, phosphomannomutase, phosphoglycolate phosphatase, P-type ATPase, and many others, all of which use a nucleophilic aspartate in their phosphoryl transfer reaction. All members possess a highly conserved alpha/beta core domain, and many also possess a small cap domain, the fold and function of which is variable. Members of this superfamily are sometimes referred to as belonging to the DDDD superfamily of phosphohydrolases.
Probab=99.44 E-value=9.8e-13 Score=109.66 Aligned_cols=49 Identities=31% Similarity=0.415 Sum_probs=45.5
Q ss_pred ccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEE
Q psy7233 292 PVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLV 341 (383)
Q Consensus 292 ~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V 341 (383)
....+||++..+..++++++..++++++|||+ .+|+.+|+++|+.+++|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~igD~-~~d~~~~~~~g~~~i~v 139 (139)
T cd01427 91 PFDIGKPNPDKLLAALKLLGVDPEEVLMVGDS-LNDIEMAKAAGGLGVAV 139 (139)
T ss_pred ccccCCCCHHHHHHHHHHcCCChhhEEEeCCC-HHHHHHHHHcCCceeeC
Confidence 35678999999999999999999999999999 89999999999999875
No 72
>PLN02954 phosphoserine phosphatase
Probab=99.44 E-value=4.6e-13 Score=123.28 Aligned_cols=126 Identities=17% Similarity=0.184 Sum_probs=79.8
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHH---------hcCCC---ccccCCCCHHHHHH
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKT---------GAQRE---PVVIGKPSKLIGSY 305 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~---~~~~gKP~p~~~~~ 305 (383)
.++++.+.+..++++|.++ |+|+....... .....++... ...+.. ..+.. +...++|+|.+++.
T Consensus 85 l~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~-~~l~~~gi~~-~~~~~~~~~~~~~g~~~g~~~~~~~~~~~~K~~~i~~ 162 (224)
T PLN02954 85 LSPGIPELVKKLRARGTDVYLVSGGFRQMIA-PVAAILGIPP-ENIFANQILFGDSGEYAGFDENEPTSRSGGKAEAVQH 162 (224)
T ss_pred CCccHHHHHHHHHHCCCEEEEECCCcHHHHH-HHHHHhCCCh-hhEEEeEEEEcCCCcEECccCCCcccCCccHHHHHHH
Confidence 3677888888888888775 66765543321 1111111110 001100 11111 11245778899999
Q ss_pred HHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 306 LIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 306 al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
+++++|. +++++|||+ .+|+.+|+++|+..+...+|....+.. . ..|+++++++.+|.+++
T Consensus 163 ~~~~~~~--~~~i~iGDs-~~Di~aa~~~~~~~~~~~~~~~~~~~~-~-----------~~~~~~i~~~~el~~~~ 223 (224)
T PLN02954 163 IKKKHGY--KTMVMIGDG-ATDLEARKPGGADLFIGYGGVQVREAV-A-----------AKADWFVTDFQDLIEVL 223 (224)
T ss_pred HHHHcCC--CceEEEeCC-HHHHHhhhcCCCCEEEecCCCccCHHH-H-----------hcCCEEECCHHHHHHhh
Confidence 9999885 799999999 999999999998876544433332222 2 26899999999998875
No 73
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=99.41 E-value=8.4e-13 Score=121.12 Aligned_cols=121 Identities=21% Similarity=0.198 Sum_probs=78.3
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHh--------cC--CCccccCCCCHHHHHHHH
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTG--------AQ--REPVVIGKPSKLIGSYLI 307 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~--------~~--~~~~~~gKP~p~~~~~al 307 (383)
.++++.+.+..++++|.++ ++||....... ......+.. ..+... .+ ......++|+|.+|+.++
T Consensus 86 ~~~g~~~~l~~l~~~g~~~~IvS~~~~~~~~-~~l~~~~i~---~~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~~~~ 161 (219)
T TIGR00338 86 LTEGAEELVKTLKEKGYKVAVISGGFDLFAE-HVKDKLGLD---AAFANRLEVEDGKLTGLVEGPIVDASYKGKTLLILL 161 (219)
T ss_pred cCCCHHHHHHHHHHCCCEEEEECCCcHHHHH-HHHHHcCCC---ceEeeEEEEECCEEEEEecCcccCCcccHHHHHHHH
Confidence 4677888999998888775 77775433221 110111211 111110 00 011123578999999999
Q ss_pred HHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeC--CHhhHHHhh
Q psy7233 308 EKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS--SLGDMLPFL 381 (383)
Q Consensus 308 ~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~--sl~eL~~~l 381 (383)
+++|++|++|++|||+ .+|+.+|+++|+..+ +. | + +.+.+ .+++++. ++.+++++|
T Consensus 162 ~~~~~~~~~~i~iGDs-~~Di~aa~~ag~~i~-~~-~--~-~~~~~------------~a~~~i~~~~~~~~~~~~ 219 (219)
T TIGR00338 162 RKEGISPENTVAVGDG-ANDLSMIKAAGLGIA-FN-A--K-PKLQQ------------KADICINKKDLTDILPLL 219 (219)
T ss_pred HHcCCCHHHEEEEECC-HHHHHHHHhCCCeEE-eC-C--C-HHHHH------------hchhccCCCCHHHHHhhC
Confidence 9999999999999999 899999999999753 22 2 2 22332 5788866 678887764
No 74
>TIGR01685 MDP-1 magnesium-dependent phosphatase-1. This model represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterized as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues.
Probab=99.40 E-value=1.9e-12 Score=114.74 Aligned_cols=51 Identities=20% Similarity=0.283 Sum_probs=45.8
Q ss_pred CCCCHHHHHHHHHHc--CCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCC
Q psy7233 296 GKPSKLIGSYLIEKY--NLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTT 347 (383)
Q Consensus 296 gKP~p~~~~~al~~l--gi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~ 347 (383)
.||.+.+++.+.+.+ |++|++|+||||+ ..|+.+|+++|+.+++|.+|..-
T Consensus 110 ~kp~~~i~~~~~~~~~~gl~p~e~l~VgDs-~~di~aA~~aGi~~i~v~~g~~~ 162 (174)
T TIGR01685 110 AKQLEMILQKVNKVDPSVLKPAQILFFDDR-TDNVREVWGYGVTSCYCPSGMDK 162 (174)
T ss_pred HHHHHHHHHHhhhcccCCCCHHHeEEEcCh-hHhHHHHHHhCCEEEEcCCCccH
Confidence 578888888888887 8999999999999 89999999999999999998644
No 75
>PRK01158 phosphoglycolate phosphatase; Provisional
Probab=99.39 E-value=2.1e-12 Score=119.28 Aligned_cols=57 Identities=18% Similarity=0.195 Sum_probs=47.5
Q ss_pred CCEEEEecCCceecCC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLEN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|+||+||||++.. .+.+.+.++|+++++.|++++++|+ |+...+.+.++.+|++
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~al~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~ 60 (230)
T PRK01158 3 IKAIAIDIDGTITDKDRRLSLKAVEAIRKAEKLGIPVILATG---NVLCFARAAAKLIGTS 60 (230)
T ss_pred eeEEEEecCCCcCCCCCccCHHHHHHHHHHHHCCCEEEEEcC---CchHHHHHHHHHhCCC
Confidence 6899999999999875 4678999999999999999999999 5555555556667764
No 76
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=99.35 E-value=1.2e-11 Score=119.00 Aligned_cols=49 Identities=16% Similarity=0.252 Sum_probs=46.4
Q ss_pred CCCCHHHHHHHHHHcCC-CCCcEEEEecCchhhHHHHHHcCCcEEEEcCCC
Q psy7233 296 GKPSKLIGSYLIEKYNL-NPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGD 345 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi-~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~ 345 (383)
+||+|++++.++++++. .|++|+||||+ .+|+++|+++|+.+++|.+|.
T Consensus 250 ~kp~p~~~~~~l~~~~~~~~~~~~~vgD~-~~d~~~a~~~Gi~~i~v~~g~ 299 (300)
T PHA02530 250 KRPDDVVKEEIFWEKIAPKYDVLLAVDDR-DQVVDMWRRIGLECWQVAPGD 299 (300)
T ss_pred CCCcHHHHHHHHHHHhccCceEEEEEcCc-HHHHHHHHHhCCeEEEecCCC
Confidence 79999999999999998 68999999999 999999999999999999883
No 77
>COG0241 HisB Histidinol phosphatase and related phosphatases [Amino acid transport and metabolism]
Probab=99.34 E-value=1.8e-11 Score=108.34 Aligned_cols=74 Identities=27% Similarity=0.407 Sum_probs=60.9
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCC
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSS 373 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~s 373 (383)
.+.||+|-+++.+++++++++++.++|||+ .+|+++|.++|++.+.+.+|........ ...+++.++
T Consensus 102 ~cRKP~~gm~~~~~~~~~iD~~~s~~VGD~-~~Dlq~a~n~gi~~~~~~~~~~~~~~~~------------~~~~~~~~~ 168 (181)
T COG0241 102 DCRKPKPGMLLSALKEYNIDLSRSYVVGDR-LTDLQAAENAGIKGVLVLTGIGVTTDGA------------GRAKWVFDS 168 (181)
T ss_pred cccCCChHHHHHHHHHhCCCccceEEecCc-HHHHHHHHHCCCCceEEEcCcccccccc------------ccccccccc
Confidence 369999999999999999999999999999 8999999999999999998865533211 134667777
Q ss_pred HhhHHHh
Q psy7233 374 LGDMLPF 380 (383)
Q Consensus 374 l~eL~~~ 380 (383)
+.++..+
T Consensus 169 ~~~~~~~ 175 (181)
T COG0241 169 LAEFANL 175 (181)
T ss_pred HHHHHHH
Confidence 7776643
No 78
>PRK05446 imidazole glycerol-phosphate dehydratase/histidinol phosphatase; Provisional
Probab=99.33 E-value=3.1e-11 Score=118.19 Aligned_cols=58 Identities=19% Similarity=0.275 Sum_probs=51.2
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHh
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIA 353 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~ 353 (383)
.+||+|.++..++++++++|++++||||+ .+|+.+|+++|+++|+|+.....-++..+
T Consensus 102 ~rKP~p~~l~~a~~~l~v~~~~svmIGDs-~sDi~aAk~aGi~~I~v~~~~~~~~~i~~ 159 (354)
T PRK05446 102 CRKPKTGLVEEYLAEGAIDLANSYVIGDR-ETDVQLAENMGIKGIRYARETLNWDAIAE 159 (354)
T ss_pred CCCCCHHHHHHHHHHcCCCcccEEEEcCC-HHHHHHHHHCCCeEEEEECCCCCHHHHHH
Confidence 58999999999999999999999999999 99999999999999999775444445443
No 79
>PRK10513 sugar phosphate phosphatase; Provisional
Probab=99.32 E-value=9.1e-11 Score=111.16 Aligned_cols=57 Identities=19% Similarity=0.315 Sum_probs=47.9
Q ss_pred CCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|++|+||||++. ..+.+...+++++++++|+.++++|+ |+...+.+.++.+|++
T Consensus 3 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~ 60 (270)
T PRK10513 3 IKLIAIDMDGTLLLPDHTISPAVKQAIAAARAKGVNVVLTTG---RPYAGVHRYLKELHME 60 (270)
T ss_pred eEEEEEecCCcCcCCCCccCHHHHHHHHHHHHCCCEEEEecC---CChHHHHHHHHHhCCC
Confidence 689999999999987 46779999999999999999999999 5555666666667764
No 80
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=99.31 E-value=9.4e-12 Score=115.64 Aligned_cols=103 Identities=13% Similarity=0.029 Sum_probs=69.0
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
..++.+.+++..++++|.++ ++||..................+..++..+.+.+.....||++. .+++++|+
T Consensus 114 ~p~~~a~elL~~l~~~G~~i~iVTnr~~~k~~~~a~~ll~~lGi~~~f~~i~~~d~~~~~Kp~~~---~~l~~~~i---- 186 (237)
T TIGR01672 114 IPKEVARQLIDMHQRRGDAIFFVTGRTPGKTDTVSKTLAKNFHIPAMNPVIFAGDKPGQYQYTKT---QWIQDKNI---- 186 (237)
T ss_pred cchhHHHHHHHHHHHCCCEEEEEeCCCCCcCHHHHHHHHHHhCCchheeEEECCCCCCCCCCCHH---HHHHhCCC----
Confidence 44566889999999988875 88886432110000011111122334455556555555778775 35677776
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCCh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTM 348 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~ 348 (383)
++||||+ .+||.+|++||++++.|.+|.++.
T Consensus 187 ~i~vGDs-~~DI~aAk~AGi~~I~V~~g~~s~ 217 (237)
T TIGR01672 187 RIHYGDS-DNDITAAKEAGARGIRILRASNST 217 (237)
T ss_pred eEEEeCC-HHHHHHHHHCCCCEEEEEecCCCC
Confidence 7999999 999999999999999999997764
No 81
>TIGR01482 SPP-subfamily Sucrose-phosphate phosphatase subfamily. catalyze the same reaction as SPP.
Probab=99.31 E-value=1.9e-11 Score=112.45 Aligned_cols=53 Identities=23% Similarity=0.255 Sum_probs=43.0
Q ss_pred EEEecCCceecCC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCC
Q psy7233 98 VLTDCDGVLWLEN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153 (383)
Q Consensus 98 ViFDlDGTL~d~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~ 153 (383)
|+||+||||+++. .+.+.+.++++++++.|++++++|+ |+...+.+.++.+|.
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~Gi~~~~aTG---R~~~~~~~~~~~l~~ 54 (225)
T TIGR01482 1 IASDIDGTLTDPNRAINESALEAIRKAESVGIPVVLVTG---NSVQFARALAKLIGT 54 (225)
T ss_pred CeEeccCccCCCCcccCHHHHHHHHHHHHCCCEEEEEcC---CchHHHHHHHHHhCC
Confidence 5899999999985 4668889999999999999999999 455555555556664
No 82
>PRK09484 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase; Provisional
Probab=99.30 E-value=1.7e-11 Score=109.86 Aligned_cols=68 Identities=24% Similarity=0.260 Sum_probs=53.2
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeC----
Q psy7233 297 KPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS---- 372 (383)
Q Consensus 297 KP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~---- 372 (383)
++++..++.+++++|++|++++||||+ .+|+.+|+++|+.. .|.+ ..+.... .|+++++
T Consensus 95 ~~k~~~l~~~~~~~gl~~~ev~~VGDs-~~D~~~a~~aG~~~-~v~~----~~~~~~~-----------~a~~v~~~~~g 157 (183)
T PRK09484 95 SNKLIAFSDLLEKLAIAPEQVAYIGDD-LIDWPVMEKVGLSV-AVAD----AHPLLLP-----------RADYVTRIAGG 157 (183)
T ss_pred CcHHHHHHHHHHHhCCCHHHEEEECCC-HHHHHHHHHCCCeE-ecCC----hhHHHHH-----------hCCEEecCCCC
Confidence 345688999999999999999999999 99999999999984 3532 2233322 6899996
Q ss_pred --CHhhHHHhh
Q psy7233 373 --SLGDMLPFL 381 (383)
Q Consensus 373 --sl~eL~~~l 381 (383)
.+.++.+++
T Consensus 158 ~g~~~el~~~i 168 (183)
T PRK09484 158 RGAVREVCDLL 168 (183)
T ss_pred CCHHHHHHHHH
Confidence 678887755
No 83
>PRK10976 putative hydrolase; Provisional
Probab=99.30 E-value=1.2e-10 Score=110.19 Aligned_cols=57 Identities=19% Similarity=0.283 Sum_probs=48.0
Q ss_pred CCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|++|+||||++. ..+.+.+.+++++++++|++++++|+ |+...+.+.+..+|++
T Consensus 2 ikli~~DlDGTLl~~~~~is~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~ 59 (266)
T PRK10976 2 YQVVASDLDGTLLSPDHTLSPYAKETLKLLTARGIHFVFATG---RHHVDVGQIRDNLEIK 59 (266)
T ss_pred ceEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcC---CChHHHHHHHHhcCCC
Confidence 689999999999987 45789999999999999999999999 5555666666667764
No 84
>TIGR01670 YrbI-phosphatas 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase, YrbI family. The Methanosarcina sequence is distinctive in that it is linked to an N-terminal cytidylyltransferase domain (pfam02348) and is annotated as acylneuraminate cytidylyltransferase. This may give some clue as the function of these phosphatases. Several eukaryotic sequences scoring between trusted and noise are also closely related to this function such as the CMP-N-acetylneuraminic acid synthetase from mouse, but in these cases the phosphatase domain is clearly inactive as many of the active site residues are not conserved.
Probab=99.30 E-value=1.9e-11 Score=106.46 Aligned_cols=62 Identities=27% Similarity=0.291 Sum_probs=50.9
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHh
Q psy7233 297 KPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLG 375 (383)
Q Consensus 297 KP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~ 375 (383)
||+|+++..+++++|++|++|+||||+ .+|+.+++++|+. +.|.++. +.... .|++++++..
T Consensus 75 ~~k~~~~~~~~~~~~~~~~~~~~vGDs-~~D~~~~~~ag~~-~~v~~~~---~~~~~------------~a~~i~~~~~ 136 (154)
T TIGR01670 75 SNKLIAFSDILEKLALAPENVAYIGDD-LIDWPVMEKVGLS-VAVADAH---PLLIP------------RADYVTRIAG 136 (154)
T ss_pred cchHHHHHHHHHHcCCCHHHEEEECCC-HHHHHHHHHCCCe-EecCCcC---HHHHH------------hCCEEecCCC
Confidence 577899999999999999999999999 8999999999986 7776653 22222 5788887664
No 85
>TIGR01487 SPP-like sucrose-phosphate phosphatase-like hydrolase, Archaeal. TIGR01482, in turn, is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases.
Probab=99.29 E-value=2.3e-11 Score=111.46 Aligned_cols=57 Identities=21% Similarity=0.163 Sum_probs=46.0
Q ss_pred CCEEEEecCCceecCC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLEN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|++|+||||++.+ .+.+.+.++++++++.|++++++|+++. ..+.+.+..++++
T Consensus 1 ik~v~~DlDGTLl~~~~~i~~~~~~~i~~l~~~g~~~~~~TGR~~---~~~~~~~~~l~~~ 58 (215)
T TIGR01487 1 IKLVAIDIDGTLTEPNRMISERAIEAIRKAEKKGIPVSLVTGNTV---PFARALAVLIGTS 58 (215)
T ss_pred CcEEEEecCCCcCCCCcccCHHHHHHHHHHHHCCCEEEEEcCCcc---hhHHHHHHHhCCC
Confidence 4799999999999874 5779999999999999999999999554 4444445556654
No 86
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=99.28 E-value=2.9e-11 Score=117.44 Aligned_cols=124 Identities=15% Similarity=0.100 Sum_probs=77.2
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcch-HHHHHHH----hcCC--CccccCCCCHHHHHHHHHHc
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGS-MVAAVKT----GAQR--EPVVIGKPSKLIGSYLIEKY 310 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~-l~~~~~~----~~~~--~~~~~gKP~p~~~~~al~~l 310 (383)
.++++.+.++.+++.|.++ ++|+....+.. .....++... +...++. .++. .....+||+++.++.+++++
T Consensus 182 l~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~-~l~~~Lgld~~~an~lei~dg~ltg~v~g~iv~~k~K~~~L~~la~~l 260 (322)
T PRK11133 182 LMPGLTELVLKLQALGWKVAIASGGFTYFAD-YLRDKLRLDAAVANELEIMDGKLTGNVLGDIVDAQYKADTLTRLAQEY 260 (322)
T ss_pred CChhHHHHHHHHHHcCCEEEEEECCcchhHH-HHHHHcCCCeEEEeEEEEECCEEEeEecCccCCcccHHHHHHHHHHHc
Confidence 3577888888888888765 66665443221 1101111100 0000000 0010 01234789999999999999
Q ss_pred CCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeC--CHhhHHHhh
Q psy7233 311 NLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS--SLGDMLPFL 381 (383)
Q Consensus 311 gi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~--sl~eL~~~l 381 (383)
|+++++|++|||+ .+|+.|++.||+..++ . .. ..+.+ .++++++ +++.++-+|
T Consensus 261 gi~~~qtIaVGDg-~NDl~m~~~AGlgiA~--n--Ak-p~Vk~------------~Ad~~i~~~~l~~~l~~~ 315 (322)
T PRK11133 261 EIPLAQTVAIGDG-ANDLPMIKAAGLGIAY--H--AK-PKVNE------------QAQVTIRHADLMGVLCIL 315 (322)
T ss_pred CCChhhEEEEECC-HHHHHHHHHCCCeEEe--C--CC-HHHHh------------hCCEEecCcCHHHHHHHh
Confidence 9999999999999 8999999999986664 2 22 33333 5788776 566666554
No 87
>PLN02887 hydrolase family protein
Probab=99.28 E-value=5.6e-11 Score=123.42 Aligned_cols=63 Identities=22% Similarity=0.330 Sum_probs=52.9
Q ss_pred HHhhcCCCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 89 KDFLNSFDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 89 ~~~~~~~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.....++|.|+||+||||+++ +++.+.+.++|++++++|+.++++|+ |+...+.+.++.+|++
T Consensus 302 ~~~~~~iKLIa~DLDGTLLn~d~~Is~~t~eAI~kl~ekGi~~vIATG---R~~~~i~~~l~~L~l~ 365 (580)
T PLN02887 302 RFYKPKFSYIFCDMDGTLLNSKSQISETNAKALKEALSRGVKVVIATG---KARPAVIDILKMVDLA 365 (580)
T ss_pred hhhccCccEEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHhCcc
Confidence 345667999999999999987 46789999999999999999999999 6666666667777764
No 88
>PRK03669 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.28 E-value=2.4e-10 Score=108.64 Aligned_cols=60 Identities=20% Similarity=0.248 Sum_probs=50.7
Q ss_pred hcCCCEEEEecCCceecCCc-cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 92 LNSFDTVLTDCDGVLWLENE-LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 92 ~~~~kaViFDlDGTL~d~~~-~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
++.++.|++||||||++.+. +.+.+.+++++++++|++++++|+ |+...+.+.++.+|++
T Consensus 4 ~~~~~lI~~DlDGTLL~~~~~i~~~~~~ai~~l~~~Gi~~viaTG---R~~~~i~~~~~~l~~~ 64 (271)
T PRK03669 4 LQDPLLIFTDLDGTLLDSHTYDWQPAAPWLTRLREAQVPVILCSS---KTAAEMLPLQQTLGLQ 64 (271)
T ss_pred cCCCeEEEEeCccCCcCCCCcCcHHHHHHHHHHHHcCCeEEEEcC---CCHHHHHHHHHHhCCC
Confidence 45789999999999998755 458899999999999999999999 5666777777777774
No 89
>PRK15126 thiamin pyrimidine pyrophosphate hydrolase; Provisional
Probab=99.26 E-value=2.5e-10 Score=108.43 Aligned_cols=57 Identities=16% Similarity=0.184 Sum_probs=49.2
Q ss_pred CCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|+||+||||++. +.+.+.+.+++++++++|+.++++|+ |+...+.+.++++|++
T Consensus 2 ~kli~~DlDGTLl~~~~~i~~~~~~ai~~l~~~G~~~~iaTG---R~~~~~~~~~~~l~~~ 59 (272)
T PRK15126 2 ARLAAFDMDGTLLMPDHHLGEKTLSTLARLRERDITLTFATG---RHVLEMQHILGALSLD 59 (272)
T ss_pred ccEEEEeCCCcCcCCCCcCCHHHHHHHHHHHHCCCEEEEECC---CCHHHHHHHHHHcCCC
Confidence 689999999999986 46789999999999999999999999 6666777777777765
No 90
>COG0561 Cof Predicted hydrolases of the HAD superfamily [General function prediction only]
Probab=99.24 E-value=4.2e-10 Score=106.32 Aligned_cols=58 Identities=19% Similarity=0.345 Sum_probs=49.5
Q ss_pred CCCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.++.|+||+||||++. ..+.+...+++++++++|++++++|+ |+...+.+.++.++.+
T Consensus 2 ~~kli~~DlDGTLl~~~~~i~~~~~~al~~~~~~g~~v~iaTG---R~~~~~~~~~~~l~~~ 60 (264)
T COG0561 2 MIKLLAFDLDGTLLDSNKTISPETKEALARLREKGVKVVLATG---RPLPDVLSILEELGLD 60 (264)
T ss_pred CeeEEEEcCCCCccCCCCccCHHHHHHHHHHHHCCCEEEEECC---CChHHHHHHHHHcCCC
Confidence 4789999999999987 45889999999999999999999999 5556666777777765
No 91
>KOG3109|consensus
Probab=99.21 E-value=3.5e-11 Score=107.59 Aligned_cols=99 Identities=18% Similarity=0.190 Sum_probs=77.0
Q ss_pred hhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCC------ccccCCCCHHHHHHHHHHcCCC-
Q psy7233 241 PKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQRE------PVVIGKPSKLIGSYLIEKYNLN- 313 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~------~~~~gKP~p~~~~~al~~lgi~- 313 (383)
+.++..|-.|++++ +++.||.++.-.. . .+..-++.++|+.++.-+ ...+.||++.+|+.+.+..|++
T Consensus 103 ~~LRnlLL~l~~r~-k~~FTNa~k~HA~-r---~Lk~LGieDcFegii~~e~~np~~~~~vcKP~~~afE~a~k~agi~~ 177 (244)
T KOG3109|consen 103 PVLRNLLLSLKKRR-KWIFTNAYKVHAI-R---ILKKLGIEDCFEGIICFETLNPIEKTVVCKPSEEAFEKAMKVAGIDS 177 (244)
T ss_pred HHHHHHHHhCcccc-EEEecCCcHHHHH-H---HHHHhChHHhccceeEeeccCCCCCceeecCCHHHHHHHHHHhCCCC
Confidence 45777887787654 8899999887552 2 333344566666554322 3457899999999999999998
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcEEEEcCCC
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQTLLVLTGD 345 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~ 345 (383)
|.++++|.|| .+.|++|++.|+++++|....
T Consensus 178 p~~t~FfDDS-~~NI~~ak~vGl~tvlv~~~~ 208 (244)
T KOG3109|consen 178 PRNTYFFDDS-ERNIQTAKEVGLKTVLVGREH 208 (244)
T ss_pred cCceEEEcCc-hhhHHHHHhccceeEEEEeee
Confidence 9999999999 888999999999999997653
No 92
>TIGR02726 phenyl_P_delta phenylphosphate carboxylase, delta subunit. Members of this protein family are the alpha subunit of phenylphosphate carboxylase. Phenol (methyl-benzene) is converted to phenylphosphate, then para-carboxylated by this four-subunit enzyme, with the release of phosphate, to 4-hydroxybenzoate. The enzyme contains neither biotin nor thiamin pyrophosphate. This delta subunit belongs to HAD family hydrolases.
Probab=99.21 E-value=1.3e-10 Score=102.68 Aligned_cols=42 Identities=17% Similarity=0.235 Sum_probs=39.3
Q ss_pred CCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEE
Q psy7233 297 KPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTL 339 (383)
Q Consensus 297 KP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv 339 (383)
||+|+.|..+++++|++|+++++|||+ .+|+.+++.+|+..+
T Consensus 81 kpkp~~~~~~~~~l~~~~~ev~~iGD~-~nDi~~~~~ag~~~a 122 (169)
T TIGR02726 81 KKKTEPYAQMLEEMNISDAEVCYVGDD-LVDLSMMKRVGLAVA 122 (169)
T ss_pred CCCHHHHHHHHHHcCcCHHHEEEECCC-HHHHHHHHHCCCeEE
Confidence 789999999999999999999999999 899999999996554
No 93
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=99.19 E-value=1.4e-11 Score=111.12 Aligned_cols=102 Identities=9% Similarity=-0.066 Sum_probs=63.7
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCcccc----------CCCCHHHHHHH
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVI----------GKPSKLIGSYL 306 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~----------gKP~p~~~~~a 306 (383)
..|+++.+.+..++++|.++ ++||....... .....++.. ..+......+..+. .+|+++++..+
T Consensus 80 ~~~~g~~e~l~~l~~~g~~~~IvS~~~~~~~~-~~l~~~g~~---~~~~~~~~~~~~g~~~p~~~~~~~~~~k~~~~~~~ 155 (201)
T TIGR01491 80 SLRDYAEELVRWLKEKGLKTAIVSGGIMCLAK-KVAEKLNPD---YVYSNELVFDEKGFIQPDGIVRVTFDNKGEAVERL 155 (201)
T ss_pred CCCccHHHHHHHHHHCCCEEEEEeCCcHHHHH-HHHHHhCCC---eEEEEEEEEcCCCeEecceeeEEccccHHHHHHHH
Confidence 34688899999998888775 77775443221 110111111 11100000000011 12334689999
Q ss_pred HHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 307 IEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 307 l~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
++++|++|+++++|||+ .+|+.+|++||+..+....+
T Consensus 156 ~~~~~~~~~~~i~iGDs-~~D~~~a~~ag~~~a~~~~~ 192 (201)
T TIGR01491 156 KRELNPSLTETVAVGDS-KNDLPMFEVADISISLGDEG 192 (201)
T ss_pred HHHhCCCHHHEEEEcCC-HhHHHHHHhcCCeEEECCCc
Confidence 99999999999999999 99999999999976654444
No 94
>PF09419 PGP_phosphatase: Mitochondrial PGP phosphatase; InterPro: IPR010021 This group of hypothetical proteins is a part of the IIIA subfamily of the haloacid dehalogenase (HAD) superfamily of hydrolases. All characterised members of this subfamily and most characterised members of the HAD superfamily are phosphatases. HAD superfamily phosphatases contain active site residues in several conserved catalytic motifs [], all of which are found conserved here. This family consists of sequences from fungi, plants, cyanobacteria, Gram-positive bacteria and Deinococcus. There is presently no characterisation of any sequence in this family.
Probab=99.19 E-value=2e-10 Score=100.69 Aligned_cols=57 Identities=21% Similarity=0.292 Sum_probs=44.1
Q ss_pred ccccCChhh--HHHhhcCCCEEEEecCCcee--cCCccChhHHHHHHHHHHcCce--EEEEcCCC
Q psy7233 79 NLSELSGDK--QKDFLNSFDTVLTDCDGVLW--LENELISGADQVMNSLKSLGKK--IFYVTNNS 137 (383)
Q Consensus 79 ~~~~~~~~~--~~~~~~~~kaViFDlDGTL~--d~~~~~p~A~eal~~l~~~Gi~--v~ivTn~~ 137 (383)
++..++.+. ++ -..||+++||.|.||. +..++.|...++++++++.+.. ++++||++
T Consensus 25 si~~I~~~~~~Lk--~~Gik~li~DkDNTL~~~~~~~i~~~~~~~~~~l~~~~~~~~v~IvSNsa 87 (168)
T PF09419_consen 25 SIRDIDFEANHLK--KKGIKALIFDKDNTLTPPYEDEIPPEYAEWLNELKKQFGKDRVLIVSNSA 87 (168)
T ss_pred ChhhCCcchhhhh--hcCceEEEEcCCCCCCCCCcCcCCHHHHHHHHHHHHHCCCCeEEEEECCC
Confidence 333444444 43 3479999999999995 4578889999999999998764 99999964
No 95
>PRK00192 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=99.18 E-value=1.3e-10 Score=110.60 Aligned_cols=57 Identities=30% Similarity=0.296 Sum_probs=49.9
Q ss_pred CCEEEEecCCceec-CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWL-ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d-~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|++|+||||++ ...+.+++.++|++++++|++++++|| |+...+...++.+|++
T Consensus 4 ~kli~~DlDGTLl~~~~~~~~~~~~ai~~l~~~Gi~~~iaTg---R~~~~~~~~~~~l~l~ 61 (273)
T PRK00192 4 KLLVFTDLDGTLLDHHTYSYEPAKPALKALKEKGIPVIPCTS---KTAAEVEVLRKELGLE 61 (273)
T ss_pred ceEEEEcCcccCcCCCCcCcHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHcCCC
Confidence 78999999999998 467889999999999999999999999 5666777777778865
No 96
>TIGR00099 Cof-subfamily Cof subfamily of IIB subfamily of haloacid dehalogenase superfamily. The members of this subfamily are restricted almost exclusively to bacteria (one sequences from S. pombe scores above trusted, while another is between trusted and noise). It is notable that no archaea are found in this group, the closest relations to the archaea found here being two Deinococcus sequences.
Probab=99.16 E-value=8.9e-10 Score=103.64 Aligned_cols=55 Identities=22% Similarity=0.422 Sum_probs=46.6
Q ss_pred EEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 97 TVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 97 aViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.|+||+||||++. ..+.+.+.+++++++++|+.++++|| |+...+.+.+.++|++
T Consensus 1 li~~DlDGTLl~~~~~i~~~~~~~i~~l~~~G~~~~iaTG---R~~~~~~~~~~~~~~~ 56 (256)
T TIGR00099 1 LIFIDLDGTLLNDDHTISPSTKEALAKLREKGIKVVLATG---RPYKEVKNILKELGLD 56 (256)
T ss_pred CEEEeCCCCCCCCCCccCHHHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCC
Confidence 3789999999987 45779999999999999999999999 5566777777777765
No 97
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=99.16 E-value=1.6e-11 Score=113.02 Aligned_cols=125 Identities=14% Similarity=0.101 Sum_probs=79.9
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHH---HHhcCCCccccCCCCHHH----------HH
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAV---KTGAQREPVVIGKPSKLI----------GS 304 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~gKP~p~~----------~~ 304 (383)
.++++.+.++.++++|+++ |+||....+.. ...... ... ..+ ......+....+||+|.. ..
T Consensus 75 l~pG~~e~l~~l~~~g~~~~IvS~~~~~~i~-~il~~~-~~~--~~i~~n~~~~~~~~~~~~kp~p~~~~~~~~~~~~K~ 150 (219)
T PRK09552 75 IREGFHEFVQFVKENNIPFYVVSGGMDFFVY-PLLQGL-IPK--EQIYCNGSDFSGEYITITWPHPCDEHCQNHCGCCKP 150 (219)
T ss_pred cCcCHHHHHHHHHHcCCeEEEECCCcHHHHH-HHHHHh-CCc--CcEEEeEEEecCCeeEEeccCCccccccccCCCchH
Confidence 4678889999998888886 77776543321 110000 000 001 001222335567888865 35
Q ss_pred HHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 305 YLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 305 ~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
.++++++..+++|+||||+ .+|+.+|++||+..+ .+ ...+..+ ....|.+.++++.|+.+.|+
T Consensus 151 ~~l~~~~~~~~~~i~iGDs-~~Di~aa~~Ag~~~a---~~--~l~~~~~---------~~~~~~~~~~~f~ei~~~l~ 213 (219)
T PRK09552 151 SLIRKLSDTNDFHIVIGDS-ITDLEAAKQADKVFA---RD--FLITKCE---------ELGIPYTPFETFHDVQTELK 213 (219)
T ss_pred HHHHHhccCCCCEEEEeCC-HHHHHHHHHCCccee---HH--HHHHHHH---------HcCCCccccCCHHHHHHHHH
Confidence 7899999999999999999 999999999998322 22 1111111 13368888999999988765
No 98
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=99.15 E-value=1.2e-10 Score=105.69 Aligned_cols=124 Identities=10% Similarity=0.047 Sum_probs=75.1
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCC--Cc--cccCCCCHHHHHHHHHHcCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQR--EP--VVIGKPSKLIGSYLIEKYNLN 313 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~--~~~gKP~p~~~~~al~~lgi~ 313 (383)
..|+++.+.+..++++....++||....+.. ......+.. .++...... +. ....+|.|.....++++++..
T Consensus 68 ~~~pg~~e~L~~L~~~~~~~IvS~~~~~~~~-~~l~~~gl~---~~f~~~~~~~~~~~i~~~~~~~p~~k~~~l~~~~~~ 143 (205)
T PRK13582 68 DPLPGAVEFLDWLRERFQVVILSDTFYEFAG-PLMRQLGWP---TLFCHSLEVDEDGMITGYDLRQPDGKRQAVKALKSL 143 (205)
T ss_pred CCCCCHHHHHHHHHhcCCEEEEeCCcHHHHH-HHHHHcCCc---hhhcceEEECCCCeEECccccccchHHHHHHHHHHh
Confidence 3478889999999887333477876665431 111122222 222221100 10 111234445567777788778
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccE-EeCCHhhHHHhhh
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADY-YLSSLGDMLPFLS 382 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~-vi~sl~eL~~~l~ 382 (383)
+++++||||+ .+|+.+|+++|+.. ++.+ ....... .|++ +++++.+|.+++.
T Consensus 144 ~~~~v~iGDs-~~D~~~~~aa~~~v-~~~~---~~~~~~~------------~~~~~~~~~~~el~~~l~ 196 (205)
T PRK13582 144 GYRVIAAGDS-YNDTTMLGEADAGI-LFRP---PANVIAE------------FPQFPAVHTYDELLAAID 196 (205)
T ss_pred CCeEEEEeCC-HHHHHHHHhCCCCE-EECC---CHHHHHh------------CCcccccCCHHHHHHHHH
Confidence 8999999999 99999999999743 3322 2222221 4565 8999999988764
No 99
>TIGR02463 MPGP_rel mannosyl-3-phosphoglycerate phosphatase-related protein. This family consists of members of the HAD superfamily, subfamily IIB. All members are closely related to mannosyl-3-phosphoglycerate phosphatase, the second enzyme in a two-step pathway for biosynthesis of mannosylglycerate, a compatible solute present in some thermophiles and in Dehalococcoides ethenogenes. However, members of this family are separable in a neighbor-joining tree constructed from a multiple sequence alignment and are found only in mesophiles that lack the companion mannosyl-3-phosphoglycerate synthase (TIGR02460). Members of this family are like to act on a compound related to yet distinct from mannosyl-3-phosphoglycerate.
Probab=99.15 E-value=4.4e-11 Score=109.97 Aligned_cols=54 Identities=26% Similarity=0.310 Sum_probs=45.5
Q ss_pred EEEecCCceecCCc-cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 98 VLTDCDGVLWLENE-LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 98 ViFDlDGTL~d~~~-~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
|++||||||++++. .++.+.+++++++++|++++++|| |+...+...++.+|++
T Consensus 2 i~~DlDGTLL~~~~~~~~~~~~~l~~l~~~gi~~~i~Tg---R~~~~~~~~~~~l~~~ 56 (221)
T TIGR02463 2 VFSDLDGTLLDSHSYDWQPAAPWLTRLQEAGIPVILCTS---KTAAEVEYLQKALGLT 56 (221)
T ss_pred EEEeCCCCCcCCCCCCcHHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 78999999998755 667799999999999999999999 5666666667777764
No 100
>PF08282 Hydrolase_3: haloacid dehalogenase-like hydrolase; InterPro: IPR013200 The Haloacid Dehydrogenase (HAD) superfamily includes phosphatases, phosphonatases, P-type ATPases, beta-phosphoglucomutases, phosphomannomutases, and dehalogenases, which are involved in a variety of cellular processes ranging from amino acid biosynthesis to detoxification []. This HAD domain is found in several distinct enzymes including: Phospholipid-transporting ATPase 1 (3.6.3.1 from EC), a putative lipid-flipping enzyme involved in cold tolerance in Arabidopsis [] 3-deoxy-D-manno-octulosonate (KDO) 8-phosphate phosphatase (3.1.3.45 from EC), which catalyses the final step in the biosynthesis of KDO - a component of lipopolysaccharide in Gram-negative bacteria [] Mannosyl-3-phosphoglycerate phosphatase (3.1.3.70 from EC), which hydrolyzes mannosyl-3-phosphoglycerate to form the osmolyte mannosylglycerate [] Phosphoglycolate phopshatase (3.1.3.18 from EC), which catalyses the dephosphorylation of 2-phosphoglycolate [] ; PDB: 2B30_B 3R4C_A 1XVI_B 3IJ5_B 3MMZ_C 3L7Y_A 1XPJ_C 1RLT_B 1RLM_B 2HF2_A ....
Probab=99.14 E-value=5.1e-10 Score=103.48 Aligned_cols=54 Identities=22% Similarity=0.393 Sum_probs=47.3
Q ss_pred EEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 98 VLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 98 ViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
|++|+||||++. ..+.+...++|+.++++|+.++++|+ |+...+.+.+..++++
T Consensus 1 i~~DlDGTLl~~~~~i~~~~~~al~~l~~~g~~~~i~TG---R~~~~~~~~~~~~~~~ 55 (254)
T PF08282_consen 1 IFSDLDGTLLNSDGKISPETIEALKELQEKGIKLVIATG---RSYSSIKRLLKELGID 55 (254)
T ss_dssp EEEECCTTTCSTTSSSCHHHHHHHHHHHHTTCEEEEECS---STHHHHHHHHHHTTHC
T ss_pred cEEEECCceecCCCeeCHHHHHHHHhhcccceEEEEEcc---Ccccccccccccccch
Confidence 689999999875 56779999999999999999999999 6777777777777765
No 101
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=99.12 E-value=5.7e-10 Score=94.15 Aligned_cols=41 Identities=22% Similarity=0.340 Sum_probs=36.9
Q ss_pred CEEEEecCCceecCC-------------ccChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 96 DTVLTDCDGVLWLEN-------------ELISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 96 kaViFDlDGTL~d~~-------------~~~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
|+++||+|||||++. .++||+.+.++.++++|+++.++||+
T Consensus 1 kli~~DlD~Tl~~~~~~~~~~~~~~~~~~~~~gv~e~L~~Lk~~g~~l~i~Sn~ 54 (128)
T TIGR01681 1 KVIVFDLDNTLWTGENIVVGEDPIIDLEVTIKEIRDKLQTLKKNGFLLALASYN 54 (128)
T ss_pred CEEEEeCCCCCCCCCcccccCCcchhhHHHHHHHHHHHHHHHHCCeEEEEEeCC
Confidence 579999999999883 25899999999999999999999994
No 102
>TIGR01486 HAD-SF-IIB-MPGP mannosyl-3-phosphoglycerate phosphatase family. This small group of proteins is a member of the IIB subfamily (TIGR01484) of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. Several members of this family from thermophiles (and from Dehalococcoides ethenogenes) are now known to act as mannosyl-3-phosphoglycerate (MPG) phosphatase. In these cases, the enzyme acts after MPG synthase to make the compatible solute mannosylglycerate. We propose that other mesophilic members of this family do not act as mannosyl-3-phosphoglycerate phosphatase. A member of this family is found in Escherichia coli, which appears to lack MPG synthase. Mannosylglycerate is imported in E. coli by phosphoenolpyruvate-dependent transporter (PubMed:14645248), but it appears the phosphorylation is not on the glycerate moiety, that the phosphorylated import is degraded by an alpha-mannosidase from an adjacent gene, and that E. coli would have no pathway to obta
Probab=99.08 E-value=7.9e-09 Score=97.33 Aligned_cols=54 Identities=30% Similarity=0.380 Sum_probs=47.9
Q ss_pred EEEecCCceecCCc-cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 98 VLTDCDGVLWLENE-LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 98 ViFDlDGTL~d~~~-~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
|++|+||||+++.. .++.+.++++++++.|++++++|+ |+...+.+.++.+|++
T Consensus 2 i~~DlDGTll~~~~~~~~~~~~~i~~l~~~g~~~~~~Tg---R~~~~~~~~~~~~~~~ 56 (256)
T TIGR01486 2 IFTDLDGTLLDPHGYDWGPAKEVLERLQELGIPVIPCTS---KTAAEVEYLRKELGLE 56 (256)
T ss_pred EEEcCCCCCcCCCCcCchHHHHHHHHHHHCCCeEEEEcC---CCHHHHHHHHHHcCCC
Confidence 78999999999876 778899999999999999999998 6777787888888875
No 103
>TIGR02461 osmo_MPG_phos mannosyl-3-phosphoglycerate phosphatase. Members of this family are mannosyl-3-phosphoglycerate phosphatase (EC 3.1.3.70). It acts sequentially after mannosyl-3-phosphoglycerate synthase (EC 2.4.1.217) in a two-step pathway of biosynthesis of the compatible solute mannosylglycerate, a typical osmolyte of thermophiles.
Probab=99.07 E-value=3e-09 Score=98.51 Aligned_cols=55 Identities=31% Similarity=0.404 Sum_probs=48.5
Q ss_pred EEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 97 TVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 97 aViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.|+||+||||++....++++.++|++++++|++++++|+ |+..++.+.+.++|+.
T Consensus 1 li~~DlDGTLl~~~~~~~~~~~ai~~l~~~G~~~vi~Tg---R~~~~~~~~~~~lg~~ 55 (225)
T TIGR02461 1 VIFTDLDGTLLPPGYEPGPAREALEELKDLGFPIVFVSS---KTRAEQEYYREELGVE 55 (225)
T ss_pred CEEEeCCCCCcCCCCCchHHHHHHHHHHHCCCEEEEEeC---CCHHHHHHHHHHcCCC
Confidence 379999999999877889999999999999999999998 6777777778888874
No 104
>TIGR01485 SPP_plant-cyano sucrose-6F-phosphate phosphohydrolase. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.
Probab=99.06 E-value=8.7e-09 Score=96.68 Aligned_cols=49 Identities=27% Similarity=0.392 Sum_probs=44.3
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
.+++++.+++.+++++|++++++++|||+ .+|+.|++.+|..++.|.++
T Consensus 164 ~~~~K~~al~~l~~~~~i~~~~~i~~GD~-~ND~~ml~~~~~~~va~~na 212 (249)
T TIGR01485 164 QGSGKGQALQYLLQKLAMEPSQTLVCGDS-GNDIELFEIGSVRGVIVSNA 212 (249)
T ss_pred CCCChHHHHHHHHHHcCCCccCEEEEECC-hhHHHHHHccCCcEEEECCC
Confidence 46777888999999999999999999999 99999999988888888664
No 105
>PRK11009 aphA acid phosphatase/phosphotransferase; Provisional
Probab=99.06 E-value=3.6e-09 Score=98.39 Aligned_cols=44 Identities=23% Similarity=0.424 Sum_probs=36.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCC
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTT 347 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~ 347 (383)
.||++.. +++++|+ ++||||+ .+|+.+|++||+++|.|.+|..+
T Consensus 173 ~K~~K~~---~l~~~~i----~I~IGDs-~~Di~aA~~AGi~~I~v~~G~~~ 216 (237)
T PRK11009 173 GQYTKTQ---WLKKKNI----RIFYGDS-DNDITAAREAGARGIRILRAANS 216 (237)
T ss_pred CCCCHHH---HHHhcCC----eEEEcCC-HHHHHHHHHcCCcEEEEecCCCC
Confidence 4555543 4456665 9999999 99999999999999999999765
No 106
>PRK10187 trehalose-6-phosphate phosphatase; Provisional
Probab=99.05 E-value=3.1e-09 Score=100.89 Aligned_cols=63 Identities=19% Similarity=0.155 Sum_probs=51.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHc---CCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhh
Q psy7233 300 KLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNN---GFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGD 376 (383)
Q Consensus 300 p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~a---Gl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~e 376 (383)
..+..++++.+|++.+++++|||+ .+|+.|.+.+ |-.+|.|..+ . ..+.+.+++..+
T Consensus 176 g~al~~ll~~~~~~~~~v~~~GD~-~nD~~mf~~~~~~~g~~vavg~a--~-----------------~~A~~~l~~~~~ 235 (266)
T PRK10187 176 GEAIAAFMQEAPFAGRTPVFVGDD-LTDEAGFAVVNRLGGISVKVGTG--A-----------------TQASWRLAGVPD 235 (266)
T ss_pred HHHHHHHHHhcCCCCCeEEEEcCC-ccHHHHHHHHHhcCCeEEEECCC--C-----------------CcCeEeCCCHHH
Confidence 777999999999999999999999 9999999988 3355666433 1 146788999999
Q ss_pred HHHhhh
Q psy7233 377 MLPFLS 382 (383)
Q Consensus 377 L~~~l~ 382 (383)
+.++|.
T Consensus 236 v~~~L~ 241 (266)
T PRK10187 236 VWSWLE 241 (266)
T ss_pred HHHHHH
Confidence 988775
No 107
>TIGR02471 sucr_syn_bact_C sucrose phosphate synthase, sucrose phosphatase-like domain, bacterial. Sucrose phosphate synthase (SPS) and sucrose phosphate phosphatase (SPP) are the last two enzymes of sucrose biosynthesis. In cyanobacteria and plants, the C-terminal region of most or all versions of SPS has a domain homologous to the known SPP. This domain may serve a binding or regulatory rather than catalytic function. Sequences in this family are bacterial C-terminal regions found in all but two of the putative bacterial sucrose phosphate synthases described by TIGR02472.
Probab=99.03 E-value=1.1e-09 Score=101.79 Aligned_cols=54 Identities=15% Similarity=0.138 Sum_probs=44.7
Q ss_pred EEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 97 TVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 97 aViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.|++|+||||++....++...++++ ++++|+.++++|+ |+...+.+.+..+++.
T Consensus 1 li~~DlDgTLl~~~~~~~~~~~~~~-~~~~gi~~viaTG---R~~~~v~~~~~~l~l~ 54 (236)
T TIGR02471 1 LIITDLDNTLLGDDEGLASFVELLR-GSGDAVGFGIATG---RSVESAKSRYAKLNLP 54 (236)
T ss_pred CeEEeccccccCCHHHHHHHHHHHH-hcCCCceEEEEeC---CCHHHHHHHHHhCCCC
Confidence 3789999999998666666667777 6889999999999 7888888888888775
No 108
>TIGR01484 HAD-SF-IIB HAD-superfamily hydrolase, subfamily IIB. The IIB subfamily consists of Trehalose-6-phosphatase (TIGR00685), plant and cyanobacterial Sucrose-phosphatase and a closely related group of bacterial and archaeal sequences, eukaryotic phosphomannomutase (pfam03332), a large subfamily ("Cof-like hydrolases", TIGR00099) containing many closely related bacterial sequences, a hypothetical equivalog containing the E. coli YedP protein, as well as two small clusters containing sequences whose relationship to the other groups is unclear.
Probab=98.94 E-value=1.7e-08 Score=91.48 Aligned_cols=43 Identities=19% Similarity=0.185 Sum_probs=39.0
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcE
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQT 338 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~t 338 (383)
.+.+++.+++.+++++|++++++++|||+ .+|+.|++.+|+..
T Consensus 160 ~~~~K~~~~~~~~~~~~~~~~~~~~~GD~-~nD~~~~~~~~~~v 202 (204)
T TIGR01484 160 AGVDKGSALQALLKELNGKRDEILAFGDS-GNDEEMFEVAGLAV 202 (204)
T ss_pred CCCChHHHHHHHHHHhCCCHHHEEEEcCC-HHHHHHHHHcCCce
Confidence 46677888999999999999999999999 99999999999754
No 109
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=98.93 E-value=7e-10 Score=100.61 Aligned_cols=86 Identities=20% Similarity=0.157 Sum_probs=63.3
Q ss_pred cCCCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCc---ccc--CCCCHHHHHHHHH
Q psy7233 235 DSHISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREP---VVI--GKPSKLIGSYLIE 308 (383)
Q Consensus 235 ~~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~---~~~--gKP~p~~~~~al~ 308 (383)
.....++++.+++..|++.|+++ ++|+ |.... ...+....|... ... +||++.+|..+++
T Consensus 124 ~~d~~~~~~~~~l~~L~~~Gi~~~i~TG-D~~~~-------------a~~~~~~lgi~~~~v~a~~~~kP~~k~~~~~i~ 189 (215)
T PF00702_consen 124 LRDPLRPGAKEALQELKEAGIKVAILTG-DNEST-------------ASAIAKQLGIFDSIVFARVIGKPEPKIFLRIIK 189 (215)
T ss_dssp EEEEBHTTHHHHHHHHHHTTEEEEEEES-SEHHH-------------HHHHHHHTTSCSEEEEESHETTTHHHHHHHHHH
T ss_pred ecCcchhhhhhhhhhhhccCcceeeeec-ccccc-------------ccccccccccccccccccccccccchhHHHHHH
Confidence 34456899999999999999865 6664 32211 122222233221 111 5999999999999
Q ss_pred HcCCCCCcEEEEecCchhhHHHHHHcC
Q psy7233 309 KYNLNPERTLMIGDRGNTDIRLGYNNG 335 (383)
Q Consensus 309 ~lgi~p~e~l~IGDs~~~DI~~A~~aG 335 (383)
.+++++++|+||||+ .+|+.|+++||
T Consensus 190 ~l~~~~~~v~~vGDg-~nD~~al~~Ag 215 (215)
T PF00702_consen 190 ELQVKPGEVAMVGDG-VNDAPALKAAG 215 (215)
T ss_dssp HHTCTGGGEEEEESS-GGHHHHHHHSS
T ss_pred HHhcCCCEEEEEccC-HHHHHHHHhCc
Confidence 999999999999999 79999999997
No 110
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=98.92 E-value=2e-09 Score=98.74 Aligned_cols=124 Identities=15% Similarity=0.141 Sum_probs=73.7
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHH---HHhcCCCccccCCCCHHHH----------HH
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAV---KTGAQREPVVIGKPSKLIG----------SY 305 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~---~~~~~~~~~~~gKP~p~~~----------~~ 305 (383)
++++.+.+..++++|.++ |+|+....+.. .....+.. ...+ ....+.......||+|..+ ..
T Consensus 72 ~pg~~e~l~~l~~~g~~~~IvS~~~~~~i~-~il~~~~~---~~~i~~n~~~~~~~~~~~~~p~~~~~~~~~~cg~~K~~ 147 (214)
T TIGR03333 72 REGFREFVAFINEHGIPFYVISGGMDFFVY-PLLEGIVE---KDRIYCNEADFSNEYIHIDWPHPCDGTCQNQCGCCKPS 147 (214)
T ss_pred cccHHHHHHHHHHCCCeEEEECCCcHHHHH-HHHHhhCC---cccEEeceeEeeCCeeEEeCCCCCccccccCCCCCHHH
Confidence 456677777777777665 55554332211 00000000 0111 0111222345678888776 47
Q ss_pred HHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 306 LIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 306 al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
++++++..+++++||||+ .+|+.+|+.||+ +++... ......+ ...|....+++.|+.+.|+
T Consensus 148 ~l~~~~~~~~~~i~iGDg-~~D~~~a~~Ad~--~~ar~~--l~~~~~~----------~~~~~~~~~~f~di~~~l~ 209 (214)
T TIGR03333 148 LIRKLSEPNDYHIVIGDS-VTDVEAAKQSDL--CFARDY--LLNECEE----------LGLNHAPFQDFYDVRKELE 209 (214)
T ss_pred HHHHHhhcCCcEEEEeCC-HHHHHHHHhCCe--eEehHH--HHHHHHH----------cCCCccCcCCHHHHHHHHH
Confidence 788888889999999999 999999999997 444331 1111122 2256777899999988775
No 111
>TIGR01663 PNK-3'Pase polynucleotide 5'-kinase 3'-phosphatase. Note that the EC number for the kinase function is: 2.7.1.78
Probab=98.88 E-value=1e-08 Score=105.41 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=36.9
Q ss_pred cCCCCHHHHHHHHHHcC----CCCCcEEEEecCchhhHHHHHHcCC
Q psy7233 295 IGKPSKLIGSYLIEKYN----LNPERTLMIGDRGNTDIRLGYNNGF 336 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lg----i~p~e~l~IGDs~~~DI~~A~~aGl 336 (383)
..||+|.++.+++++++ +++++++||||+ ..|+.+|+++|-
T Consensus 261 ~RKP~pGm~~~a~~~~~~~~~Id~~~S~~VGDa-agr~~~g~~ag~ 305 (526)
T TIGR01663 261 YRKPLTGMWDHLKEEANDGTEIQEDDCFFVGDA-AGRPANGKAAGK 305 (526)
T ss_pred CCCCCHHHHHHHHHhcCcccCCCHHHeEEeCCc-ccchHHHHhcCC
Confidence 57999999999999984 899999999999 888888887775
No 112
>TIGR00685 T6PP trehalose-phosphatase. At least 18 distinct sequences from Arabidopsis have been identified, roughly half of these are of the fungal type, with a fused synthase and half are like the bacterial members having only the phosphatase domain. It has been suggested that trehalose is being used in Arabidopsis as a regulatory molecule in development and possibly other processes.
Probab=98.86 E-value=1.4e-07 Score=88.26 Aligned_cols=65 Identities=23% Similarity=0.206 Sum_probs=55.6
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHc-------CCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeC
Q psy7233 300 KLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNN-------GFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS 372 (383)
Q Consensus 300 p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~a-------Gl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~ 372 (383)
..++..+++++++.++++++|||+ .+|+.|++.+ |..++.|..|.. ...++++++
T Consensus 169 g~a~~~~~~~~~~~~~~~i~iGD~-~~D~~~~~~~~~~~~~~g~~~v~v~~g~~-----------------~~~A~~~~~ 230 (244)
T TIGR00685 169 GEIVKRLLWHQPGSGISPVYLGDD-ITDEDAFRVVNNQWGNYGFYPVPIGSGSK-----------------KTVAKFHLT 230 (244)
T ss_pred HHHHHHHHHhcccCCCceEEEcCC-CcHHHHHHHHhcccCCCCeEEEEEecCCc-----------------CCCceEeCC
Confidence 577999999999999999999999 9999999999 777888875521 126899999
Q ss_pred CHhhHHHhhh
Q psy7233 373 SLGDMLPFLS 382 (383)
Q Consensus 373 sl~eL~~~l~ 382 (383)
+..++.++|+
T Consensus 231 ~~~~v~~~L~ 240 (244)
T TIGR00685 231 GPQQVLEFLG 240 (244)
T ss_pred CHHHHHHHHH
Confidence 9999988875
No 113
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=98.74 E-value=4.3e-08 Score=89.34 Aligned_cols=119 Identities=11% Similarity=0.059 Sum_probs=74.0
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHH---------hcCCCccccCCCCHHHHHHHHH
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKT---------GAQREPVVIGKPSKLIGSYLIE 308 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~---------~~~~~~~~~gKP~p~~~~~al~ 308 (383)
..++++.+.+..+++++...++|++...+.. .....++.. ..+.. .+|. ....||.+......++
T Consensus 68 ~l~pga~ell~~lk~~~~~~IVS~~~~~~~~-~il~~lgi~---~~~an~l~~~~~g~~tG~--~~~~~~~K~~~l~~l~ 141 (203)
T TIGR02137 68 KPLEGAVEFVDWLRERFQVVILSDTFYEFSQ-PLMRQLGFP---TLLCHKLEIDDSDRVVGY--QLRQKDPKRQSVIAFK 141 (203)
T ss_pred CCCccHHHHHHHHHhCCeEEEEeCChHHHHH-HHHHHcCCc---hhhceeeEEecCCeeECe--eecCcchHHHHHHHHH
Confidence 3467888889988887655688876554331 111222222 12211 1111 1135677777777777
Q ss_pred HcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccE-EeCCHhhHHHhhh
Q psy7233 309 KYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADY-YLSSLGDMLPFLS 382 (383)
Q Consensus 309 ~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~-vi~sl~eL~~~l~ 382 (383)
..|. ++++|||+ .+|+.+++.||+..++... +.-.+. -|++ ++.+.+||.+.+.
T Consensus 142 ~~~~---~~v~vGDs-~nDl~ml~~Ag~~ia~~ak----~~~~~~------------~~~~~~~~~~~~~~~~~~ 196 (203)
T TIGR02137 142 SLYY---RVIAAGDS-YNDTTMLSEAHAGILFHAP----ENVIRE------------FPQFPAVHTYEDLKREFL 196 (203)
T ss_pred hhCC---CEEEEeCC-HHHHHHHHhCCCCEEecCC----HHHHHh------------CCCCCcccCHHHHHHHHH
Confidence 7663 89999999 9999999999988775322 222222 3444 6788999887764
No 114
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=98.74 E-value=2.1e-08 Score=89.20 Aligned_cols=38 Identities=21% Similarity=0.103 Sum_probs=32.0
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCC
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGF 336 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl 336 (383)
.|.+++.+++.+.+.. ++++++|||+ .+|+.+|++|++
T Consensus 146 ~g~~K~~~~~~~~~~~---~~~~i~iGD~-~~D~~aa~~~d~ 183 (188)
T TIGR01489 146 CGCCKGKVIHKLSEPK---YQHIIYIGDG-VTDVCPAKLSDV 183 (188)
T ss_pred CCCCHHHHHHHHHhhc---CceEEEECCC-cchhchHhcCCc
Confidence 4455688888887765 8999999999 999999999964
No 115
>PTZ00445 p36-lilke protein; Provisional
Probab=98.74 E-value=6.1e-08 Score=87.27 Aligned_cols=51 Identities=22% Similarity=0.371 Sum_probs=46.9
Q ss_pred cccCCCCHHH--H--HHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 293 VVIGKPSKLI--G--SYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 293 ~~~gKP~p~~--~--~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
.+.-||+|.+ | ++++++.|+.|+++++|.|+ ...+++|++.|++++.+.++
T Consensus 153 ~gl~KPdp~iK~yHle~ll~~~gl~peE~LFIDD~-~~NVeaA~~lGi~ai~f~~~ 207 (219)
T PTZ00445 153 LGLDAPMPLDKSYHLKQVCSDFNVNPDEILFIDDD-MNNCKNALKEGYIALHVTGN 207 (219)
T ss_pred hcccCCCccchHHHHHHHHHHcCCCHHHeEeecCC-HHHHHHHHHCCCEEEEcCCh
Confidence 3568999999 9 99999999999999999999 77799999999999998764
No 116
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=98.73 E-value=8e-08 Score=93.65 Aligned_cols=41 Identities=17% Similarity=0.003 Sum_probs=38.1
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCc
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQ 337 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~ 337 (383)
.||+|+.+..+++++|+.|++++||||+ ..|+.++++++-.
T Consensus 85 ~~pk~~~i~~~~~~l~i~~~~~vfidD~-~~d~~~~~~~lp~ 125 (320)
T TIGR01686 85 WGPKSESLRKIAKKLNLGTDSFLFIDDN-PAERANVKITLPV 125 (320)
T ss_pred cCchHHHHHHHHHHhCCCcCcEEEECCC-HHHHHHHHHHCCC
Confidence 4799999999999999999999999999 8899999998754
No 117
>PRK12702 mannosyl-3-phosphoglycerate phosphatase; Reviewed
Probab=98.70 E-value=3.7e-07 Score=86.58 Aligned_cols=57 Identities=23% Similarity=0.224 Sum_probs=49.6
Q ss_pred CCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|.|++|+||||+|. ...++.+.+++++++++|++++++|+ |+..++....+.+|++
T Consensus 1 ~KLIftDLDGTLLd~~~~~~~~a~~aL~~Lk~~GI~vVlaTG---Rt~~ev~~l~~~Lgl~ 58 (302)
T PRK12702 1 MRLVLSSLDGSLLDLEFNSYGAARQALAALERRSIPLVLYSL---RTRAQLEHLCRQLRLE 58 (302)
T ss_pred CcEEEEeCCCCCcCCCCcCCHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHHHhCCC
Confidence 478999999999995 55889999999999999999999998 6777777777778875
No 118
>PTZ00174 phosphomannomutase; Provisional
Probab=98.70 E-value=2.1e-07 Score=87.35 Aligned_cols=53 Identities=25% Similarity=0.223 Sum_probs=45.5
Q ss_pred CCCEEEEecCCceecCC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHH
Q psy7233 94 SFDTVLTDCDGVLWLEN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLK 149 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~ 149 (383)
.+|.|+||+||||++++ ++.+...+++++++++|+.++++|+ |+...+.+.+.
T Consensus 4 ~~klia~DlDGTLL~~~~~is~~~~~ai~~l~~~Gi~~viaTG---R~~~~i~~~l~ 57 (247)
T PTZ00174 4 KKTILLFDVDGTLTKPRNPITQEMKDTLAKLKSKGFKIGVVGG---SDYPKIKEQLG 57 (247)
T ss_pred CCeEEEEECcCCCcCCCCCCCHHHHHHHHHHHHCCCEEEEEcC---CCHHHHHHHHh
Confidence 37899999999999884 5789999999999999999999999 55666666664
No 119
>PF08645 PNK3P: Polynucleotide kinase 3 phosphatase; InterPro: IPR013954 Polynucleotide kinase 3 phosphatases play a role in the repair of single breaks in DNA induced by DNA-damaging agents such as gamma radiation and camptothecin []. ; PDB: 2FPW_A 2FPR_A 2FPX_A 2FPS_A 2FPU_B 3ZVM_A 1YJ5_A 3ZVL_A 3U7E_B 3U7G_A ....
Probab=98.65 E-value=1.6e-07 Score=82.23 Aligned_cols=45 Identities=20% Similarity=0.475 Sum_probs=35.1
Q ss_pred cCCCCHHHHHHHHHHcC----CCCCcEEEEecCc----------hhhHHHHHHcCCcEE
Q psy7233 295 IGKPSKLIGSYLIEKYN----LNPERTLMIGDRG----------NTDIRLGYNNGFQTL 339 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lg----i~p~e~l~IGDs~----------~~DI~~A~~aGl~tv 339 (383)
+.||.+-+++.++++++ ++.++++||||+. .+|..-|.++|++..
T Consensus 95 ~RKP~~GM~~~~~~~~~~~~~id~~~Sf~VGDaagr~~~~~d~s~~D~~fA~N~gi~f~ 153 (159)
T PF08645_consen 95 CRKPNPGMWEFALKDYNDGVEIDLANSFYVGDAAGRSKKKKDFSDSDRKFALNCGIKFY 153 (159)
T ss_dssp TSTTSSHHHHHHCCCTSTT--S-CCC-EEEESSCHCTB-S--S--HHHHHHHHHT--EE
T ss_pred CCCCchhHHHHHHHhccccccccccceEEEeccCCCCCcccccChhHHHHHHHcCCccc
Confidence 68999999999999986 5899999999942 579999999998753
No 120
>PLN02382 probable sucrose-phosphatase
Probab=98.59 E-value=2e-06 Score=86.69 Aligned_cols=47 Identities=28% Similarity=0.332 Sum_probs=41.3
Q ss_pred cCCCCHHHHHHHHHHc---CCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 295 IGKPSKLIGSYLIEKY---NLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 295 ~gKP~p~~~~~al~~l---gi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
.+| ..+..++++++ |++++++++|||+ .||+.|.+.+|..+|.+.++
T Consensus 174 ~sK--g~Al~~L~~~~~~~gi~~~~~iafGDs-~NDleMl~~ag~~gvam~NA 223 (413)
T PLN02382 174 AGK--GQALAYLLKKLKAEGKAPVNTLVCGDS-GNDAELFSVPDVYGVMVSNA 223 (413)
T ss_pred CCH--HHHHHHHHHHhhhcCCChhcEEEEeCC-HHHHHHHhcCCCCEEEEcCC
Confidence 455 67799999999 9999999999999 99999999999878877554
No 121
>PRK14502 bifunctional mannosyl-3-phosphoglycerate synthase/mannosyl-3 phosphoglycerate phosphatase; Provisional
Probab=98.55 E-value=2.9e-06 Score=88.84 Aligned_cols=58 Identities=24% Similarity=0.168 Sum_probs=48.2
Q ss_pred CCCEEEEecCCceecCC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLEN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..|.|++|+||||++.. ..++.+.+++++++++|++++++|+ |+...+...++.+|++
T Consensus 415 ~~KLIfsDLDGTLLd~d~~i~~~t~eAL~~L~ekGI~~VIATG---Rs~~~i~~l~~~Lgl~ 473 (694)
T PRK14502 415 FKKIVYTDLDGTLLNPLTYSYSTALDALRLLKDKELPLVFCSA---KTMGEQDLYRNELGIK 473 (694)
T ss_pred eeeEEEEECcCCCcCCCCccCHHHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCCC
Confidence 35899999999999864 5678899999999999999999999 5566666666677764
No 122
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=98.54 E-value=3.6e-08 Score=89.10 Aligned_cols=99 Identities=10% Similarity=0.112 Sum_probs=63.1
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHH-HHH-----hcCCC--ccccCCCCHHHHHHHHHH
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAA-VKT-----GAQRE--PVVIGKPSKLIGSYLIEK 309 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~-~~~-----~~~~~--~~~~gKP~p~~~~~al~~ 309 (383)
.++++.+.++.++++|.++ ++|+....... .....++...+... +.. .+|.. +...|+++...++.++++
T Consensus 88 ~~~~~~~~l~~l~~~g~~v~ivS~s~~~~v~-~~~~~lg~~~~~~~~l~~~~~g~~~g~~~~~~~~g~~K~~~l~~~~~~ 166 (202)
T TIGR01490 88 LYPEARDLIRWHKAEGHTIVLVSASLTILVK-PLARILGIDNAIGTRLEESEDGIYTGNIDGNNCKGEGKVHALAELLAE 166 (202)
T ss_pred ccHHHHHHHHHHHHCCCEEEEEeCCcHHHHH-HHHHHcCCcceEecceEEcCCCEEeCCccCCCCCChHHHHHHHHHHHH
Confidence 4678888888888888765 66765543221 11011222111100 110 01110 123456777889999999
Q ss_pred cCCCCCcEEEEecCchhhHHHHHHcCCcEE
Q psy7233 310 YNLNPERTLMIGDRGNTDIRLGYNNGFQTL 339 (383)
Q Consensus 310 lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv 339 (383)
.|+++++++++||| .+|+.+++.+|...+
T Consensus 167 ~~~~~~~~~~~gDs-~~D~~~~~~a~~~~~ 195 (202)
T TIGR01490 167 EQIDLKDSYAYGDS-ISDLPLLSLVGHPYV 195 (202)
T ss_pred cCCCHHHcEeeeCC-cccHHHHHhCCCcEE
Confidence 99999999999999 899999999996665
No 123
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=98.44 E-value=1.8e-07 Score=82.46 Aligned_cols=38 Identities=16% Similarity=0.236 Sum_probs=32.7
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHc
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNN 334 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~a 334 (383)
+..++..+..+++.+|++++++++|||+ .+|+.+++.|
T Consensus 140 ~~~K~~~l~~~~~~~~~~~~~~~~iGDs-~~D~~~~~~a 177 (177)
T TIGR01488 140 GECKGKVLKELLEESKITLKKIIAVGDS-VNDLPMLKLA 177 (177)
T ss_pred cchHHHHHHHHHHHhCCCHHHEEEEeCC-HHHHHHHhcC
Confidence 3444678888899999999999999999 9999999865
No 124
>PF05116 S6PP: Sucrose-6F-phosphate phosphohydrolase; InterPro: IPR006380 This family of sequences represent sucrose phosphate phosphohydrolase (SPP) from plants and cyanobacteria []. SPP is a member of the Class IIB subfamily of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. SPP catalyzes the final step in the biosynthesis of sucrose, a critically important molecule for plants. Sucrose phosphate synthase (SPS), the prior step in the biosynthesis of sucrose contains a domain which exhibits considerable similarity to SPP albeit without conservation of the catalytic residues. The catalytic machinery of the synthase resides in another domain. It seems likely that the phosphatase-like domain is involved in substrate binding, possibly binding both substrates in a "product-like" orientation prior to ligation by the synthase catalytic domain.; PDB: 1TJ5_A 2B1Q_A 1TJ4_A 1S2O_A 1U2T_A 2D2V_A 1TJ3_A 1U2S_A 2B1R_A 3GYG_B ....
Probab=98.39 E-value=1.4e-06 Score=81.90 Aligned_cols=190 Identities=17% Similarity=0.235 Sum_probs=100.5
Q ss_pred CEEEEecCCceecCCc-cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHH--------
Q psy7233 96 DTVLTDCDGVLWLENE-LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYL-------- 166 (383)
Q Consensus 96 kaViFDlDGTL~d~~~-~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~-------- 166 (383)
+.++.|+||||+++.. ......+.++...+.++.++++|+ |+.+.+.+.+...+++ .++-++++.+.
T Consensus 3 ~ll~sDlD~Tl~~~~~~~~~~l~~~l~~~~~~~~~~v~~TG---Rs~~~~~~~~~~~~l~-~Pd~~I~svGt~I~~~~~~ 78 (247)
T PF05116_consen 3 RLLASDLDGTLIDGDDEALARLEELLEQQARPEILFVYVTG---RSLESVLRLLREYNLP-QPDYIITSVGTEIYYGENW 78 (247)
T ss_dssp EEEEEETBTTTBHCHHHHHHHHHHHHHHHHCCGEEEEEE-S---S-HHHHHHHHHHCT-E-E-SEEEETTTTEEEESSTT
T ss_pred EEEEEECCCCCcCCCHHHHHHHHHHHHHhhCCCceEEEECC---CCHHHHHHHHHhCCCC-CCCEEEecCCeEEEEcCCC
Confidence 4789999999995432 233333444434467788999998 8899999999888764 45656554322
Q ss_pred -----HHHHHHhcCCCCCeEEEEeCcchHHHHHHc-CCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCCh
Q psy7233 167 -----AAQYLKKHLDPKKKAYIVGSSGIADELNLA-GIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISF 240 (383)
Q Consensus 167 -----~~~~l~~~~~~~~~~~~ig~~~l~~~l~~~-gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~ 240 (383)
-.+.+... ++ .+.+.+.+.+. ++..-+ +... . .-...+.+ +.....
T Consensus 79 ~~d~~w~~~i~~~--w~-------~~~v~~~l~~~~~l~~q~---~~~q-----~--------~~k~sy~~---~~~~~~ 130 (247)
T PF05116_consen 79 QPDEEWQAHIDER--WD-------RERVEEILAELPGLRPQP---ESEQ-----R--------PFKISYYV---DPDDSA 130 (247)
T ss_dssp EE-HHHHHHHHTT-----------HHHHHHHHHCHCCEEEGG---CCCG-----C--------CTCECEEE---ETTSHC
T ss_pred cChHHHHHHHHhc--CC-------hHHHHHHHHHhhCcccCC---cccc-----C--------CeeEEEEE---ecccch
Confidence 12222221 11 12233333322 111110 0000 0 00111111 111111
Q ss_pred hhHHHHHHHhhCCCCEE--EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEE
Q psy7233 241 PKLMKAACYLTNPNTLF--VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTL 318 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~~--i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l 318 (383)
..+.++-..++..|... +.+|. +.. ..-|...+| ..+..++++++|+++++++
T Consensus 131 ~~~~~i~~~l~~~~l~~~~i~s~~-~~l----------------------dilP~~a~K--~~Al~~L~~~~~~~~~~vl 185 (247)
T PF05116_consen 131 DILEEIRARLRQRGLRVNVIYSNG-RDL----------------------DILPKGASK--GAALRYLMERWGIPPEQVL 185 (247)
T ss_dssp HHHHHHHHHHHCCTCEEEEEECTC-CEE----------------------EEEETT-SH--HHHHHHHHHHHT--GGGEE
T ss_pred hHHHHHHHHHHHcCCCeeEEEccc-eeE----------------------EEccCCCCH--HHHHHHHHHHhCCCHHHEE
Confidence 22444555566777764 43432 110 111123465 7779999999999999999
Q ss_pred EEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 319 MIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 319 ~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
++||| .||+.|. ..+..+|.|.+.
T Consensus 186 ~aGDS-gND~~mL-~~~~~~vvV~Na 209 (247)
T PF05116_consen 186 VAGDS-GNDLEML-EGGDHGVVVGNA 209 (247)
T ss_dssp EEESS-GGGHHHH-CCSSEEEE-TTS
T ss_pred EEeCC-CCcHHHH-cCcCCEEEEcCC
Confidence 99999 9999999 777789988653
No 125
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=98.31 E-value=3e-05 Score=83.79 Aligned_cols=57 Identities=18% Similarity=0.141 Sum_probs=44.8
Q ss_pred cCCCEEEEecCCceecC------CccChhHHHHHHHHHHc-CceEEEEcCCCCCCHHHHHHHHHhcC
Q psy7233 93 NSFDTVLTDCDGVLWLE------NELISGADQVMNSLKSL-GKKIFYVTNNSTKTREQLIVKLKHLG 152 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~------~~~~p~A~eal~~l~~~-Gi~v~ivTn~~~~~~~~~~~~L~~lG 152 (383)
.+.+.++||+||||++. ..+.+.+.++|++|.+. |+.++++|+ |+...+.+.+..++
T Consensus 490 ~~~rLi~~D~DGTL~~~~~~~~~~~~~~~~~~~L~~L~~d~g~~V~ivSG---R~~~~l~~~~~~~~ 553 (726)
T PRK14501 490 ASRRLLLLDYDGTLVPFAPDPELAVPDKELRDLLRRLAADPNTDVAIISG---RDRDTLERWFGDLP 553 (726)
T ss_pred ccceEEEEecCccccCCCCCcccCCCCHHHHHHHHHHHcCCCCeEEEEeC---CCHHHHHHHhCCCC
Confidence 35799999999999973 23568999999999994 999999999 56666665554443
No 126
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=98.30 E-value=9.1e-08 Score=82.72 Aligned_cols=90 Identities=11% Similarity=-0.046 Sum_probs=66.4
Q ss_pred hhhHHHHHHHhhCCCCE-EEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEE
Q psy7233 240 FPKLMKAACYLTNPNTL-FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTL 318 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~-~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l 318 (383)
++++.+.|..|++ ++. .++||....... .....++... .++..+.+.+....+||+ |.++++++|.+|++|+
T Consensus 47 ~pG~~e~L~~L~~-~~~l~I~Ts~~~~~~~-~il~~l~~~~--~~f~~i~~~~d~~~~KP~---~~k~l~~l~~~p~~~i 119 (148)
T smart00577 47 RPGVDEFLKRASE-LFELVVFTAGLRMYAD-PVLDLLDPKK--YFGYRRLFRDECVFVKGK---YVKDLSLLGRDLSNVI 119 (148)
T ss_pred CCCHHHHHHHHHh-ccEEEEEeCCcHHHHH-HHHHHhCcCC--CEeeeEEECccccccCCe---EeecHHHcCCChhcEE
Confidence 6889999999985 555 488887766542 1111222211 123555666667788987 9999999999999999
Q ss_pred EEecCchhhHHHHHHcCCc
Q psy7233 319 MIGDRGNTDIRLGYNNGFQ 337 (383)
Q Consensus 319 ~IGDs~~~DI~~A~~aGl~ 337 (383)
+|||+ ..|+.+|+++|+.
T Consensus 120 ~i~Ds-~~~~~aa~~ngI~ 137 (148)
T smart00577 120 IIDDS-PDSWPFHPENLIP 137 (148)
T ss_pred EEECC-HHHhhcCccCEEE
Confidence 99999 8999999999943
No 127
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=98.29 E-value=9e-06 Score=71.16 Aligned_cols=193 Identities=12% Similarity=0.151 Sum_probs=119.9
Q ss_pred CEEEEecCCceec----CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHH
Q psy7233 96 DTVLTDCDGVLWL----ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYL 171 (383)
Q Consensus 96 kaViFDlDGTL~d----~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l 171 (383)
++++.|+.||.-. -+.++|-|...+..+.+++.. -+.-...+.+.++..|.....++++... .+.+
T Consensus 5 kaiLlDIEGTv~~iSFVkdvlFPYa~~~lp~fv~e~~e-------~~~v~~~v~~v~~e~g~~~s~E~lva~~---~~wi 74 (229)
T COG4229 5 KAILLDIEGTVSPISFVKDVLFPYAARKLPDFVRENTE-------DSEVKKIVDEVLSEFGIANSEEALVALL---LEWI 74 (229)
T ss_pred hhheeeccccccchhHHHhhhhHHHHHHhHHHHHhhcc-------CChhhHHHHHHHHHhCccchHHHHHHHH---HHHH
Confidence 7899999999743 256789998888888776522 1112234556666788765444333211 1111
Q ss_pred HhcCCCCCeEEEEeCcchHHHHHHc----CCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHH
Q psy7233 172 KKHLDPKKKAYIVGSSGIADELNLA----GIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAA 247 (383)
Q Consensus 172 ~~~~~~~~~~~~ig~~~l~~~l~~~----gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l 247 (383)
.+. . .+...+.++.+ |++.. --....|++..+.+
T Consensus 75 aed----~------K~t~lK~lQG~iWa~Gy~sg--------------------------------elkahlypDav~~i 112 (229)
T COG4229 75 AED----S------KDTPLKALQGMIWAHGYESG--------------------------------ELKAHLYPDAVQAI 112 (229)
T ss_pred hcc----c------ccchHHHHHhHHHHhccccC--------------------------------ccccccCHhHHHHH
Confidence 111 1 11233444432 33221 12234589988999
Q ss_pred HHhhCCCCEEEE-ecCCCCCCCCCCccccC---cchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecC
Q psy7233 248 CYLTNPNTLFVA-TNTDESFPMGPHVTVPG---TGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDR 323 (383)
Q Consensus 248 ~~L~~~g~~~i~-tn~d~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs 323 (383)
+.-++.|+++.+ |+.+. + .+. +.++ .+.+..+|....+. ..-+|-....|.++++.+|++|.+++++.|.
T Consensus 113 k~wk~~g~~vyiYSSGSV--~-AQk-L~Fghs~agdL~~lfsGyfDt--tiG~KrE~~SY~kIa~~iGl~p~eilFLSDn 186 (229)
T COG4229 113 KRWKALGMRVYIYSSGSV--K-AQK-LFFGHSDAGDLNSLFSGYFDT--TIGKKRESQSYAKIAGDIGLPPAEILFLSDN 186 (229)
T ss_pred HHHHHcCCcEEEEcCCCc--h-hHH-HhhcccccccHHhhhcceeec--cccccccchhHHHHHHhcCCCchheEEecCC
Confidence 998889988744 44322 2 122 4444 34455554433332 2335777888999999999999999999999
Q ss_pred chhhHHHHHHcCCcEEEEcC-CCCC
Q psy7233 324 GNTDIRLGYNNGFQTLLVLT-GDTT 347 (383)
Q Consensus 324 ~~~DI~~A~~aGl~tv~V~~-G~~~ 347 (383)
...+.+|+.+|+.|+++.. |...
T Consensus 187 -~~EL~AA~~vGl~t~l~~R~g~~P 210 (229)
T COG4229 187 -PEELKAAAGVGLATGLAVRPGNAP 210 (229)
T ss_pred -HHHHHHHHhcchheeeeecCCCCC
Confidence 7789999999999988854 5433
No 128
>TIGR01689 EcbF-BcbF capsule biosynthesis phosphatase. Due to the likelihood that the substrates of these enzymes are different depending on the nature of the particular polysaccharides associated with each species, this model has been classified as a subfamily despite the close homology.
Probab=98.22 E-value=4.3e-06 Score=70.14 Aligned_cols=47 Identities=21% Similarity=0.287 Sum_probs=39.6
Q ss_pred CEEEEecCCceecCC-------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHH
Q psy7233 96 DTVLTDCDGVLWLEN-------ELISGADQVMNSLKSLGKKIFYVTNNSTKTRE 142 (383)
Q Consensus 96 kaViFDlDGTL~d~~-------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~ 142 (383)
|+|+||+||||.+.. .+.+++.+++++++++|+.++++|+++.+...
T Consensus 2 K~i~~DiDGTL~~~~~~~y~~~~~~~~~ie~L~~l~~~G~~IiiaTGR~~~~~~ 55 (126)
T TIGR01689 2 KRLVMDLDNTITLTENGDYANVAPILAVIEKLRHYKALGFEIVISSSRNMRTYE 55 (126)
T ss_pred CEEEEeCCCCcccCCCCcccccccCHHHHHHHHHHHHCCCEEEEECCCCchhhh
Confidence 689999999998742 25578999999999999999999997766654
No 129
>PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming]
Probab=98.19 E-value=8e-05 Score=81.29 Aligned_cols=54 Identities=22% Similarity=0.350 Sum_probs=43.4
Q ss_pred CCCEEEEecCCceecCC----ccChhHHHHHHHH-HHcCceEEEEcCCCCCCHHHHHHHHHh
Q psy7233 94 SFDTVLTDCDGVLWLEN----ELISGADQVMNSL-KSLGKKIFYVTNNSTKTREQLIVKLKH 150 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~----~~~p~A~eal~~l-~~~Gi~v~ivTn~~~~~~~~~~~~L~~ 150 (383)
+.++|++|+||||.+.. .+.++..+.|++| ...|..++++|+ |+...+.+.+..
T Consensus 595 ~~rlI~LDyDGTLlp~~~~~~~p~~~~~~~L~~L~~d~g~~VaIvSG---R~~~~L~~~f~~ 653 (854)
T PLN02205 595 TTRAILLDYDGTLMPQASIDKSPSSKSIDILNTLCRDKNNMVFIVSA---RSRKTLADWFSP 653 (854)
T ss_pred cCeEEEEecCCcccCCccccCCCCHHHHHHHHHHHhcCCCEEEEEeC---CCHHHHHHHhCC
Confidence 47899999999999654 5567899999998 667999999999 666666666643
No 130
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=98.18 E-value=3.5e-06 Score=79.93 Aligned_cols=68 Identities=16% Similarity=0.208 Sum_probs=54.1
Q ss_pred hcCCCEEEEecCCceecCCcc----ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 92 LNSFDTVLTDCDGVLWLENEL----ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 92 ~~~~kaViFDlDGTL~d~~~~----~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
..-.+.|+||+||||++.+.. -|++.+++.+|+++|++++++|| .+++.+.+.|+.+|++-..+.+++
T Consensus 123 ~~~~kvIvFDLDgTLi~~~~~v~irdPgV~EaL~~LkekGikLaIaTS---~~Re~v~~~L~~lGLd~YFdvIIs 194 (301)
T TIGR01684 123 FEPPHVVVFDLDSTLITDEEPVRIRDPRIYDSLTELKKRGCILVLWSY---GDRDHVVESMRKVKLDRYFDIIIS 194 (301)
T ss_pred cccceEEEEecCCCCcCCCCccccCCHHHHHHHHHHHHCCCEEEEEEC---CCHHHHHHHHHHcCCCcccCEEEE
Confidence 455789999999999988653 49999999999999999999998 345566678888898743344443
No 131
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=98.14 E-value=4.3e-05 Score=79.72 Aligned_cols=116 Identities=16% Similarity=0.091 Sum_probs=73.9
Q ss_pred CCCChhhHHHHHHHhhCCCC-EE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCC
Q psy7233 236 SHISFPKLMKAACYLTNPNT-LF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLN 313 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~-~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~ 313 (383)
....++++.+.++.|+++|+ ++ ++||...... ......++. ..++. .-.|.+ =..++++++..
T Consensus 360 ~d~l~~~~~e~i~~L~~~Gi~~v~vvTgd~~~~a-~~i~~~lgi---~~~f~---------~~~p~~--K~~~i~~l~~~ 424 (536)
T TIGR01512 360 SDEPRPDAAEAIAELKALGIEKVVMLTGDRRAVA-ERVARELGI---DEVHA---------ELLPED--KLEIVKELREK 424 (536)
T ss_pred eccchHHHHHHHHHHHHcCCCcEEEEcCCCHHHH-HHHHHHcCC---hhhhh---------ccCcHH--HHHHHHHHHhc
Confidence 44568999999999999998 65 6676433222 111011121 11111 112222 23456666666
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
.++++||||+ .+|+.++++|| +.|.+|....+.... .+|+++ +++.++.+++.
T Consensus 425 ~~~v~~vGDg-~nD~~al~~A~---vgia~g~~~~~~~~~------------~ad~vl~~~~l~~l~~~i~ 479 (536)
T TIGR01512 425 YGPVAMVGDG-INDAPALAAAD---VGIAMGASGSDVAIE------------TADVVLLNDDLSRLPQAIR 479 (536)
T ss_pred CCEEEEEeCC-HHHHHHHHhCC---EEEEeCCCccHHHHH------------hCCEEEECCCHHHHHHHHH
Confidence 7899999999 99999999999 577777432222221 579999 89999987653
No 132
>PLN02580 trehalose-phosphatase
Probab=98.14 E-value=0.00019 Score=71.17 Aligned_cols=64 Identities=25% Similarity=0.258 Sum_probs=48.9
Q ss_pred HHHHHHHHHHcCCCCCc---EEEEecCchhhHHHHHHc-----CCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe
Q psy7233 300 KLIGSYLIEKYNLNPER---TLMIGDRGNTDIRLGYNN-----GFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL 371 (383)
Q Consensus 300 p~~~~~al~~lgi~p~e---~l~IGDs~~~DI~~A~~a-----Gl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi 371 (383)
..+.+.+++.+|++..+ .++|||+ .||..|.+.+ | .+|.|..|.. ...+.|.+
T Consensus 303 G~Av~~Ll~~~g~~~~d~~~pi~iGDD-~TDedmF~~L~~~~~G-~~I~Vgn~~~-----------------~t~A~y~L 363 (384)
T PLN02580 303 GKAVEFLLESLGLSNCDDVLPIYIGDD-RTDEDAFKVLREGNRG-YGILVSSVPK-----------------ESNAFYSL 363 (384)
T ss_pred HHHHHHHHHhcCCCcccceeEEEECCC-chHHHHHHhhhccCCc-eEEEEecCCC-----------------CccceEEc
Confidence 67799999999988764 3899999 9999999963 4 3555654421 12578999
Q ss_pred CCHhhHHHhhh
Q psy7233 372 SSLGDMLPFLS 382 (383)
Q Consensus 372 ~sl~eL~~~l~ 382 (383)
++..++.++|+
T Consensus 364 ~dp~eV~~~L~ 374 (384)
T PLN02580 364 RDPSEVMEFLK 374 (384)
T ss_pred CCHHHHHHHHH
Confidence 99999988875
No 133
>PRK10671 copA copper exporting ATPase; Provisional
Probab=98.13 E-value=0.00018 Score=79.01 Aligned_cols=117 Identities=15% Similarity=0.021 Sum_probs=76.2
Q ss_pred CCCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCC
Q psy7233 236 SHISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNP 314 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p 314 (383)
....+++..+.+..|++.|+++ ++|+ |.... ...+....+.+.+ +.--.|+--..++++++..+
T Consensus 648 ~d~~r~~a~~~i~~L~~~gi~v~~~Tg-d~~~~-------------a~~ia~~lgi~~~-~~~~~p~~K~~~i~~l~~~~ 712 (834)
T PRK10671 648 RDPLRSDSVAALQRLHKAGYRLVMLTG-DNPTT-------------ANAIAKEAGIDEV-IAGVLPDGKAEAIKRLQSQG 712 (834)
T ss_pred cCcchhhHHHHHHHHHHCCCeEEEEcC-CCHHH-------------HHHHHHHcCCCEE-EeCCCHHHHHHHHHHHhhcC
Confidence 3345788999999999999886 5555 33221 1111111222211 11122444456778888888
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
++++||||+ .+|+.++++||+ .|.+|.++....+.. .+.+..+++.++.++++
T Consensus 713 ~~v~~vGDg-~nD~~al~~Agv---gia~g~g~~~a~~~a-----------d~vl~~~~~~~i~~~i~ 765 (834)
T PRK10671 713 RQVAMVGDG-INDAPALAQADV---GIAMGGGSDVAIETA-----------AITLMRHSLMGVADALA 765 (834)
T ss_pred CEEEEEeCC-HHHHHHHHhCCe---eEEecCCCHHHHHhC-----------CEEEecCCHHHHHHHHH
Confidence 999999999 999999999996 666676554444432 56667789999888764
No 134
>PRK08238 hypothetical protein; Validated
Probab=98.12 E-value=6.1e-06 Score=84.51 Aligned_cols=95 Identities=12% Similarity=0.062 Sum_probs=64.0
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEE
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTL 318 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l 318 (383)
++++.+.++.++++|.++ ++|+.++.... .....++. ++.+.+.+.....||++.. ..+.+.++ .++++
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~~~~a~-~i~~~lGl------Fd~Vigsd~~~~~kg~~K~-~~l~~~l~--~~~~~ 143 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASDERLAQ-AVAAHLGL------FDGVFASDGTTNLKGAAKA-AALVEAFG--ERGFD 143 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCCHHHHH-HHHHHcCC------CCEEEeCCCccccCCchHH-HHHHHHhC--ccCee
Confidence 477999999999999885 77876654331 11011111 4455555545556666543 33445665 36689
Q ss_pred EEecCchhhHHHHHHcCCcEEEEcCCCC
Q psy7233 319 MIGDRGNTDIRLGYNNGFQTLLVLTGDT 346 (383)
Q Consensus 319 ~IGDs~~~DI~~A~~aGl~tv~V~~G~~ 346 (383)
++||+ .+|+.+++.+| +.+.|+.+..
T Consensus 144 yvGDS-~~Dlp~~~~A~-~av~Vn~~~~ 169 (479)
T PRK08238 144 YAGNS-AADLPVWAAAR-RAIVVGASPG 169 (479)
T ss_pred EecCC-HHHHHHHHhCC-CeEEECCCHH
Confidence 99999 99999999999 8888887643
No 135
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=98.07 E-value=0.00016 Score=75.75 Aligned_cols=115 Identities=13% Similarity=0.102 Sum_probs=71.5
Q ss_pred CCCChhhHHHHHHHhhCCC-CEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCC
Q psy7233 236 SHISFPKLMKAACYLTNPN-TLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLN 313 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g-~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~ 313 (383)
....++++.+.++.|+++| +++ ++||....... ......+.. .++. . ..+++++ .+.++++..
T Consensus 382 ~d~~~~g~~e~l~~L~~~g~i~v~ivTgd~~~~a~-~i~~~lgi~---~~f~---~----~~p~~K~----~~v~~l~~~ 446 (556)
T TIGR01525 382 RDQLRPEAKEAIAALKRAGGIKLVMLTGDNRSAAE-AVAAELGID---EVHA---E----LLPEDKL----AIVKELQEE 446 (556)
T ss_pred cccchHhHHHHHHHHHHcCCCeEEEEeCCCHHHHH-HHHHHhCCC---eeec---c----CCHHHHH----HHHHHHHHc
Confidence 4456899999999999999 765 77764332211 110111111 1111 0 0112223 344555556
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeC--CHhhHHHhhh
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS--SLGDMLPFLS 382 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~--sl~eL~~~l~ 382 (383)
+++++||||+ .+|+.++++|| +.|.+|... +.... .+|+++. ++..+.+++.
T Consensus 447 ~~~v~~vGDg-~nD~~al~~A~---vgia~g~~~--~~~~~-----------~Ad~vi~~~~~~~l~~~i~ 500 (556)
T TIGR01525 447 GGVVAMVGDG-INDAPALAAAD---VGIAMGAGS--DVAIE-----------AADIVLLNDDLSSLPTAID 500 (556)
T ss_pred CCEEEEEECC-hhHHHHHhhCC---EeEEeCCCC--HHHHH-----------hCCEEEeCCCHHHHHHHHH
Confidence 7899999999 99999999999 777777332 22321 5889887 7888877653
No 136
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=98.07 E-value=6.7e-06 Score=71.83 Aligned_cols=54 Identities=20% Similarity=0.331 Sum_probs=42.8
Q ss_pred EEEEecCCceecCC------------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHh
Q psy7233 97 TVLTDCDGVLWLEN------------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKH 150 (383)
Q Consensus 97 aViFDlDGTL~d~~------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~ 150 (383)
.|+||+||||+++. .+.|++.+++++++++|++++++|+++-...+...+.|..
T Consensus 1 iVisDIDGTL~~sd~~~~~~~~~~~~~~~~~~~~a~~~l~~~G~~ivy~TGRp~~~~~~t~~~l~~ 66 (157)
T smart00775 1 IVISDIDGTITKSDVLGHVVPIIGKDWTHPGVAKLYRDIQNNGYKILYLTARPIGQADRTRSYLSQ 66 (157)
T ss_pred CEEEecCCCCcccccccccccccccCcCCHHHHHHHHHHHHcCCeEEEEcCCcHHHHHHHHHHHHH
Confidence 38999999999875 6689999999999999999999999655544333344443
No 137
>PLN03017 trehalose-phosphatase
Probab=98.05 E-value=0.00024 Score=69.91 Aligned_cols=65 Identities=22% Similarity=0.172 Sum_probs=47.0
Q ss_pred HHHHHHHHHHcCCCC---CcEEEEecCchhhHHHHHHcC----CcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeC
Q psy7233 300 KLIGSYLIEKYNLNP---ERTLMIGDRGNTDIRLGYNNG----FQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLS 372 (383)
Q Consensus 300 p~~~~~al~~lgi~p---~e~l~IGDs~~~DI~~A~~aG----l~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~ 372 (383)
..+.+.+++.+|... .-.++|||+ .+|-.+.+.+. --+|.|... ..+ ..+.|.++
T Consensus 285 G~Av~~LL~~l~~~~~~~~~pvyiGDD-~TDEDaF~~L~~~~~G~gI~VG~~--~k~---------------T~A~y~L~ 346 (366)
T PLN03017 285 GKALEFLLESLGFGNTNNVFPVYIGDD-RTDEDAFKMLRDRGEGFGILVSKF--PKD---------------TDASYSLQ 346 (366)
T ss_pred HHHHHHHHHhcccccCCCceEEEeCCC-CccHHHHHHHhhcCCceEEEECCC--CCC---------------CcceEeCC
Confidence 667888999888653 348999999 99999988662 235555421 111 15789999
Q ss_pred CHhhHHHhhh
Q psy7233 373 SLGDMLPFLS 382 (383)
Q Consensus 373 sl~eL~~~l~ 382 (383)
+.+++.++|+
T Consensus 347 dp~eV~~fL~ 356 (366)
T PLN03017 347 DPSEVMDFLA 356 (366)
T ss_pred CHHHHHHHHH
Confidence 9999988875
No 138
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=98.05 E-value=9.5e-05 Score=77.58 Aligned_cols=114 Identities=17% Similarity=0.097 Sum_probs=69.9
Q ss_pred CCCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCC
Q psy7233 236 SHISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNP 314 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p 314 (383)
....+++..++++.|+++|+++ ++|+...... ..+....+.+....-+|.+ =..+.++++.++
T Consensus 403 ~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd~~~~a--------------~~ia~~lgi~~~~~~~p~~--K~~~v~~l~~~~ 466 (562)
T TIGR01511 403 EDQLRPEAKEVIQALKRRGIEPVMLTGDNRKTA--------------KAVAKELGINVRAEVLPDD--KAALIKELQEKG 466 (562)
T ss_pred cccccHHHHHHHHHHHHcCCeEEEEcCCCHHHH--------------HHHHHHcCCcEEccCChHH--HHHHHHHHHHcC
Confidence 3456899999999999999876 5665433211 1111111111111112222 123344444467
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
++++||||+ .+|+.++++||+ .|.+|.+. +... ..+|+++ +++.++.+++.
T Consensus 467 ~~v~~VGDg-~nD~~al~~A~v---gia~g~g~--~~a~-----------~~Advvl~~~~l~~l~~~i~ 519 (562)
T TIGR01511 467 RVVAMVGDG-INDAPALAQADV---GIAIGAGT--DVAI-----------EAADVVLMRNDLNDVATAID 519 (562)
T ss_pred CEEEEEeCC-CccHHHHhhCCE---EEEeCCcC--HHHH-----------hhCCEEEeCCCHHHHHHHHH
Confidence 899999999 999999999994 56666443 3332 1579988 58888877653
No 139
>PLN02151 trehalose-phosphatase
Probab=98.04 E-value=0.00023 Score=69.86 Aligned_cols=50 Identities=16% Similarity=0.096 Sum_probs=39.1
Q ss_pred CCEEEEecCCcee----cC--CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHH
Q psy7233 95 FDTVLTDCDGVLW----LE--NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKL 148 (383)
Q Consensus 95 ~kaViFDlDGTL~----d~--~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L 148 (383)
-.++++|+||||. +- ..+.++..++|+.|.+ +.+++++|+ |+...+.+.+
T Consensus 98 ~~ll~lDyDGTL~PIv~~P~~A~~~~~~~~aL~~La~-~~~vaIvSG---R~~~~l~~~~ 153 (354)
T PLN02151 98 QIVMFLDYDGTLSPIVDDPDRAFMSKKMRNTVRKLAK-CFPTAIVSG---RCREKVSSFV 153 (354)
T ss_pred ceEEEEecCccCCCCCCCcccccCCHHHHHHHHHHhc-CCCEEEEEC---CCHHHHHHHc
Confidence 3588999999998 22 3567999999999994 579999999 5666665554
No 140
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=98.01 E-value=1.6e-05 Score=72.90 Aligned_cols=44 Identities=18% Similarity=0.217 Sum_probs=38.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEE
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLL 340 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~ 340 (383)
++-+.......++.+|+++++++++||+ .+|+.|-+.+|...++
T Consensus 142 ~~~K~~~l~~~~~~~g~~~~~~~a~gDs-~nDlpml~~ag~~ia~ 185 (212)
T COG0560 142 GEGKAKALRELAAELGIPLEETVAYGDS-ANDLPMLEAAGLPIAV 185 (212)
T ss_pred cchHHHHHHHHHHHcCCCHHHeEEEcCc-hhhHHHHHhCCCCeEe
Confidence 3445777889999999999999999999 9999999999976553
No 141
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=97.97 E-value=2.5e-05 Score=74.11 Aligned_cols=41 Identities=20% Similarity=0.304 Sum_probs=35.2
Q ss_pred cccCCCCH---------HHHHHHHHHcC--CCCCcEEEEecCchhhHHHHHHc
Q psy7233 293 VVIGKPSK---------LIGSYLIEKYN--LNPERTLMIGDRGNTDIRLGYNN 334 (383)
Q Consensus 293 ~~~gKP~p---------~~~~~al~~lg--i~p~e~l~IGDs~~~DI~~A~~a 334 (383)
...|||.| .+++.+++.++ ..+++|++|||+ .+|+.||.-.
T Consensus 179 vltG~~~P~i~~~~K~~~v~~~~~~~~~~~~~~~~vI~vGDs-~~Dl~ma~g~ 230 (277)
T TIGR01544 179 VLKGFKGPLIHTFNKNHDVALRNTEYFNQLKDRSNIILLGDS-QGDLRMADGV 230 (277)
T ss_pred eEeCCCCCcccccccHHHHHHHHHHHhCccCCcceEEEECcC-hhhhhHhcCC
Confidence 44577877 77888999998 899999999999 9999997755
No 142
>PHA03398 viral phosphatase superfamily protein; Provisional
Probab=97.93 E-value=2.2e-05 Score=74.66 Aligned_cols=67 Identities=19% Similarity=0.176 Sum_probs=52.1
Q ss_pred cCCCEEEEecCCceecCCcc----ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 93 NSFDTVLTDCDGVLWLENEL----ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~~~~----~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
.-.+.|+||+||||++.+.. -|++.++|++|+++|+++.++||. +.+.....|..+|++--.+.+++
T Consensus 126 ~~~~~i~~D~D~TL~~~~~~v~irdp~V~EtL~eLkekGikLaIvTNg---~Re~v~~~Le~lgL~~yFDvII~ 196 (303)
T PHA03398 126 EIPHVIVFDLDSTLITDEEPVRIRDPFVYDSLDELKERGCVLVLWSYG---NREHVVHSLKETKLEGYFDIIIC 196 (303)
T ss_pred eeccEEEEecCCCccCCCCccccCChhHHHHHHHHHHCCCEEEEEcCC---ChHHHHHHHHHcCCCccccEEEE
Confidence 34689999999999988654 499999999999999999999983 44555677777888633333443
No 143
>PF06437 ISN1: IMP-specific 5'-nucleotidase; InterPro: IPR009453 The Saccharomyces cerevisiae ISN1 (YOR155c) gene encodes an IMP-specific 5'-nucleotidase, which catalyses degradation of IMP to inosine as part of the purine salvage pathway.; GO: 0000287 magnesium ion binding, 0016791 phosphatase activity, 0009117 nucleotide metabolic process
Probab=97.86 E-value=0.00042 Score=67.49 Aligned_cols=92 Identities=18% Similarity=0.088 Sum_probs=60.6
Q ss_pred HHHHHhhhhceeecccccccccccccccCChhhHHHhhc--CCCEEEEecCCceec-CCcc--ChhHHHHHHHHHHcCce
Q psy7233 55 YFCHKFIALKCIVATSQTTVMKLINLSELSGDKQKDFLN--SFDTVLTDCDGVLWL-ENEL--ISGADQVMNSLKSLGKK 129 (383)
Q Consensus 55 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~kaViFDlDGTL~d-~~~~--~p~A~eal~~l~~~Gi~ 129 (383)
|=-..+|+.-|++-||.. . .+.+ ++...+..+.+ ..+.|.||-|+|||+ |..+ -+....-+-.|-++|+.
T Consensus 110 ~D~~r~IS~RR~V~PSFN--D-vR~I--LN~AQi~al~~~~~L~LvTFDgDvTLY~DG~sl~~d~pvi~~ii~LL~~gv~ 184 (408)
T PF06437_consen 110 QDEKRAISKRRFVPPSFN--D-VRHI--LNTAQIMALAKNYGLKLVTFDGDVTLYEDGASLEPDNPVIPRIIKLLRRGVK 184 (408)
T ss_pred hChhhhhhcCccCCCCHH--H-HHHH--HHHHHHHHhcccCCceEEEEcCCcccccCCCCCCCCchHHHHHHHHHhcCCe
Confidence 334468999999988866 1 0111 12222333334 678999999999996 4443 23344455677788999
Q ss_pred EEEEcCCCCCCHHHHHHHHHhc
Q psy7233 130 IFYVTNNSTKTREQLIVKLKHL 151 (383)
Q Consensus 130 v~ivTn~~~~~~~~~~~~L~~l 151 (383)
+.|||..+-.....+.++|..+
T Consensus 185 VgIVTAAGY~~a~kY~~RL~GL 206 (408)
T PF06437_consen 185 VGIVTAAGYPGAEKYEERLHGL 206 (408)
T ss_pred EEEEeCCCCCChHHHHHHHHHH
Confidence 9999997766666777777653
No 144
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=97.84 E-value=1.4e-05 Score=78.14 Aligned_cols=102 Identities=18% Similarity=0.153 Sum_probs=71.7
Q ss_pred ChhhHHHHHHHhhCCCCE-EEEecCCCCCCCCCCcccc-C----cchHHHHHHHhcCCCccccCCC--------------
Q psy7233 239 SFPKLMKAACYLTNPNTL-FVATNTDESFPMGPHVTVP-G----TGSMVAAVKTGAQREPVVIGKP-------------- 298 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~-~i~tn~d~~~~~~~~~~~~-~----~~~l~~~~~~~~~~~~~~~gKP-------------- 298 (383)
.++++.++|..|+++|++ +++||++..+.. .....+ + ...+.++|+.+.+. ..||
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS~~~yt~-~im~~l~g~~~~~~~w~~yFD~IIt~----a~KP~FF~~~~pf~~v~~ 259 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNSDYDYTD-KGMKYLLGPFLGEHDWRDYFDVVIVD----ARKPGFFTEGRPFRQVDV 259 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCCCHHHHH-HHHHHhhCCcccccchHhhCcEEEeC----CCCCcccCCCCceEEEeC
Confidence 378899999999999987 499998776542 111111 1 02355566544432 2333
Q ss_pred -------CH-------HH-----HHHHHHHcCCCCCcEEEEecCchhhHHHHH-HcCCcEEEEcCCC
Q psy7233 299 -------SK-------LI-----GSYLIEKYNLNPERTLMIGDRGNTDIRLGY-NNGFQTLLVLTGD 345 (383)
Q Consensus 299 -------~p-------~~-----~~~al~~lgi~p~e~l~IGDs~~~DI~~A~-~aGl~tv~V~~G~ 345 (383)
.. .+ .....+.+|+.++++++|||++.+||.+|+ .+|++|++|..-.
T Consensus 260 ~~g~~~~~~~~~l~~g~vY~gGn~~~~~~~l~~~~~~vlYvGD~i~~Di~~~kk~~Gw~TvlI~pEL 326 (343)
T TIGR02244 260 ETGSLKWGEVDGLEPGKVYSGGSLKQFHELLKWRGKEVLYFGDHIYGDLLRSKKKRGWRTAAIIPEL 326 (343)
T ss_pred CCCcccCCccccccCCCeEeCCCHHHHHHHHCCCCCcEEEECCcchHHHHhhHHhcCcEEEEEchhH
Confidence 11 11 366777889999999999999999999999 9999999997743
No 145
>KOG2961|consensus
Probab=97.83 E-value=0.00015 Score=61.83 Aligned_cols=104 Identities=18% Similarity=0.142 Sum_probs=68.9
Q ss_pred hhhHHHHHHHhhC---CCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCcccc--CCCC--HHHHHHHHHHcC-
Q psy7233 240 FPKLMKAACYLTN---PNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVI--GKPS--KLIGSYLIEKYN- 311 (383)
Q Consensus 240 ~~~l~~~l~~L~~---~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~--gKP~--p~~~~~al~~lg- 311 (383)
|+.+.+-++.+++ ..-.++.||+..... .-..++.+..++.-.|..-... -||. .+.+++.-..-.
T Consensus 63 wp~~l~~ie~~~~vygek~i~v~SNsaG~~~------~D~d~s~Ak~le~k~gIpVlRHs~kKP~ct~E~~~y~~~Nshv 136 (190)
T KOG2961|consen 63 WPPLLPSIERCKAVYGEKDIAVFSNSAGLTE------YDHDDSKAKALEAKIGIPVLRHSVKKPACTAEEVEYHFGNSHV 136 (190)
T ss_pred CchhHHHHHHHHHHhCcccEEEEecCcCccc------cCCchHHHHHHHHhhCCceEeecccCCCccHHHHHHHhCCccc
Confidence 6666666666665 234567788544321 2223556777776666554333 3543 334444333222
Q ss_pred CCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChH
Q psy7233 312 LNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTME 349 (383)
Q Consensus 312 i~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~ 349 (383)
.++++++||||++-+||.+|+..|..+||...|....+
T Consensus 137 ~~~se~~~vGDRlfTDI~~aN~mGs~gVw~~~gv~~~~ 174 (190)
T KOG2961|consen 137 CTSSELIMVGDRLFTDIVYANRMGSLGVWTEPGVRAEE 174 (190)
T ss_pred CChhHeEEEccchhhhHhhhhhccceeEEecccccccc
Confidence 57999999999999999999999999999999977644
No 146
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=97.82 E-value=4.5e-05 Score=65.36 Aligned_cols=109 Identities=17% Similarity=0.131 Sum_probs=70.7
Q ss_pred HhhcCCCEEEEecCCceecCCccChhH----H-------HHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcC
Q psy7233 90 DFLNSFDTVLTDCDGVLWLENELISGA----D-------QVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPN 158 (383)
Q Consensus 90 ~~~~~~kaViFDlDGTL~d~~~~~p~A----~-------eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~ 158 (383)
+.++++|.++||+||||+|+.-.+..- + -.++.|.+.|+++.++|+ |...-+..+.+.+|++.-..
T Consensus 3 ~ra~~IkLli~DVDGvLTDG~ly~~~~Gee~KaFnv~DG~Gik~l~~~Gi~vAIITG---r~s~ive~Ra~~LGI~~~~q 79 (170)
T COG1778 3 ARAKNIKLLILDVDGVLTDGKLYYDENGEEIKAFNVRDGHGIKLLLKSGIKVAIITG---RDSPIVEKRAKDLGIKHLYQ 79 (170)
T ss_pred hhhhhceEEEEeccceeecCeEEEcCCCceeeeeeccCcHHHHHHHHcCCeEEEEeC---CCCHHHHHHHHHcCCceeee
Confidence 346789999999999999975322111 1 257889999999999999 55666778888899985444
Q ss_pred cccchHHHHHHHHHhcCCC-CCeEEEEeCc-chHHHHHHcCCcccc
Q psy7233 159 EIIGTAYLAAQYLKKHLDP-KKKAYIVGSS-GIADELNLAGIENFG 202 (383)
Q Consensus 159 ~i~~s~~~~~~~l~~~~~~-~~~~~~ig~~-~l~~~l~~~gi~~~~ 202 (383)
.+.....+..+.+.+. +. ...+.++|.+ --...+...|+.+++
T Consensus 80 G~~dK~~a~~~L~~~~-~l~~e~~ayiGDD~~Dlpvm~~vGls~a~ 124 (170)
T COG1778 80 GISDKLAAFEELLKKL-NLDPEEVAYVGDDLVDLPVMEKVGLSVAV 124 (170)
T ss_pred chHhHHHHHHHHHHHh-CCCHHHhhhhcCccccHHHHHHcCCcccc
Confidence 4433333334444443 32 2345556654 234566777777664
No 147
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=97.78 E-value=6.7e-05 Score=71.01 Aligned_cols=68 Identities=28% Similarity=0.458 Sum_probs=56.2
Q ss_pred CCCEEEEecCCceecCC---------------------------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHH
Q psy7233 94 SFDTVLTDCDGVLWLEN---------------------------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIV 146 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~---------------------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~ 146 (383)
...+|+||+|+|+++.. .++||+.++++.++++|++++++||+.....+....
T Consensus 74 kp~AVV~DIDeTvLdns~y~~~~~~~~~~~~~~~w~~wv~~~~a~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~ 153 (266)
T TIGR01533 74 KKYAIVLDLDETVLDNSPYQGYQVLNNKPFDPETWDKWVQAAQAKPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLK 153 (266)
T ss_pred CCCEEEEeCccccccChHHHHHHhcCCCcCCHHHHHHHHHcCCCCcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHH
Confidence 46799999999997532 247999999999999999999999988777788888
Q ss_pred HHHhcCCCC-CcCccc
Q psy7233 147 KLKHLGFNA-EPNEII 161 (383)
Q Consensus 147 ~L~~lG~~i-~~~~i~ 161 (383)
.|+.+|++. ..+.++
T Consensus 154 ~Lkk~Gi~~~~~d~ll 169 (266)
T TIGR01533 154 NLKRFGFPQADEEHLL 169 (266)
T ss_pred HHHHcCcCCCCcceEE
Confidence 899999975 344444
No 148
>PLN02423 phosphomannomutase
Probab=97.60 E-value=0.00014 Score=68.28 Aligned_cols=54 Identities=17% Similarity=0.164 Sum_probs=42.5
Q ss_pred cCCCEEE-EecCCceecCC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHh
Q psy7233 93 NSFDTVL-TDCDGVLWLEN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKH 150 (383)
Q Consensus 93 ~~~kaVi-FDlDGTL~d~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~ 150 (383)
++++.++ ||+||||+++. ++.+...+++++++++ +.++++|++ ....+.+.+..
T Consensus 4 ~~~~~i~~~D~DGTLl~~~~~i~~~~~~ai~~l~~~-i~fviaTGR---~~~~~~~~~~~ 59 (245)
T PLN02423 4 RKPGVIALFDVDGTLTAPRKEATPEMLEFMKELRKV-VTVGVVGGS---DLSKISEQLGK 59 (245)
T ss_pred CccceEEEEeccCCCcCCCCcCCHHHHHHHHHHHhC-CEEEEECCc---CHHHHHHHhcc
Confidence 3567666 99999999875 5668889999999976 999999994 56666555543
No 149
>PRK11590 hypothetical protein; Provisional
Probab=97.56 E-value=0.00012 Score=66.83 Aligned_cols=38 Identities=18% Similarity=-0.015 Sum_probs=29.3
Q ss_pred HHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcC
Q psy7233 304 SYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLT 343 (383)
Q Consensus 304 ~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~ 343 (383)
..+.+.+|.+..++.+-||| .+|+.+...+| +.++|+.
T Consensus 166 ~~l~~~~~~~~~~~~aY~Ds-~~D~pmL~~a~-~~~~vnp 203 (211)
T PRK11590 166 AQLERKIGTPLRLYSGYSDS-KQDNPLLYFCQ-HRWRVTP 203 (211)
T ss_pred HHHHHHhCCCcceEEEecCC-cccHHHHHhCC-CCEEECc
Confidence 44444557778889999999 99999999999 5555644
No 150
>TIGR01675 plant-AP plant acid phosphatase. This model explicitly excludes the VSPs which lack the nucleophilc aspartate. The possibility exists, however, that some members of this family may, while containing all of the conserved HAD-superfamily catalytic residues, lack activity and have a function related to the function of the VSPs rather than the acid phosphatases.
Probab=97.40 E-value=0.00037 Score=64.38 Aligned_cols=61 Identities=21% Similarity=0.330 Sum_probs=52.0
Q ss_pred CCCEEEEecCCceecCC---------------------------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHH
Q psy7233 94 SFDTVLTDCDGVLWLEN---------------------------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIV 146 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~---------------------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~ 146 (383)
..++++||+|.|++++. +++|++.++++.++++|+.++++||++...+....+
T Consensus 76 g~~A~V~DIDET~LsN~py~~~~~~g~~~~~~~~~~~wv~~~~apaip~al~l~~~l~~~G~~Vf~lTGR~e~~r~~T~~ 155 (229)
T TIGR01675 76 GMDAWIFDVDDTLLSNIPYYKKHGYGTEKTDPTAFWLWLGKGAAPALPEGLKLYQKIIELGIKIFLLSGRWEELRNATLD 155 (229)
T ss_pred CCcEEEEccccccccCHHHHHHhccCCCcCCHHHHHHHHHcCCCCCCHHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHH
Confidence 56899999999987632 358999999999999999999999977666666788
Q ss_pred HHHhcCCC
Q psy7233 147 KLKHLGFN 154 (383)
Q Consensus 147 ~L~~lG~~ 154 (383)
.|.+.|++
T Consensus 156 nL~~~G~~ 163 (229)
T TIGR01675 156 NLINAGFT 163 (229)
T ss_pred HHHHcCCC
Confidence 89889987
No 151
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=97.38 E-value=0.021 Score=62.05 Aligned_cols=113 Identities=14% Similarity=-0.005 Sum_probs=66.0
Q ss_pred CCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCC--HHHHHHHHHHcCCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPS--KLIGSYLIEKYNLNP 314 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~--p~~~~~al~~lgi~p 314 (383)
...+++..++++.|++.|++.+.-..|.... +..+....|.+....-.|. +. +.+.++ .+
T Consensus 567 d~~r~~a~~~i~~L~~~gi~~~llTGd~~~~-------------a~~ia~~lgi~~~~~~~p~~K~~----~v~~l~-~~ 628 (741)
T PRK11033 567 DTLRADARQAISELKALGIKGVMLTGDNPRA-------------AAAIAGELGIDFRAGLLPEDKVK----AVTELN-QH 628 (741)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEEcCCCHHH-------------HHHHHHHcCCCeecCCCHHHHHH----HHHHHh-cC
Confidence 3457899999999999999874433333222 1122222222211111221 22 333444 34
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
.+++||||+ .||..++++|+ |.|..|.+.....+.. .....-+++.+|.+++.
T Consensus 629 ~~v~mvGDg-iNDapAl~~A~---vgia~g~~~~~a~~~a-----------divl~~~~l~~l~~~i~ 681 (741)
T PRK11033 629 APLAMVGDG-INDAPAMKAAS---IGIAMGSGTDVALETA-----------DAALTHNRLRGLAQMIE 681 (741)
T ss_pred CCEEEEECC-HHhHHHHHhCC---eeEEecCCCHHHHHhC-----------CEEEecCCHHHHHHHHH
Confidence 689999999 99999999999 6776675543332221 23334478888876653
No 152
>TIGR01680 Veg_Stor_Prot vegetative storage protein. The proteins represented by this model are close relatives of the plant acid phosphatases (TIGR01675), are limited to members of the Phaseoleae including Glycine max (soybean) and Phaseolus vulgaris (kidney bean). These proteins are highly expressed in the leaves of repeatedly depodded plants. VSP differs most strinkingly from the acid phosphatases in the lack of the conserved nucleophilic aspartate residue in the N-terminus, thus, they should be inactive as phosphatases. This issue was confused by the publication in 1992 of an article claiming activity for the Glycine max VSP. In 1994 this assertion was refuted by the separation of the activity from the VSP.
Probab=97.34 E-value=0.00052 Score=64.69 Aligned_cols=61 Identities=26% Similarity=0.341 Sum_probs=51.9
Q ss_pred CCCEEEEecCCceec----------------------------CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHH
Q psy7233 94 SFDTVLTDCDGVLWL----------------------------ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLI 145 (383)
Q Consensus 94 ~~kaViFDlDGTL~d----------------------------~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~ 145 (383)
.-++++||+|+|+++ ..+++|++.++++.+++.|++++++||+....+....
T Consensus 100 ~~dA~V~DIDET~LsN~pY~~~~~~g~e~~~~~~w~~~Wv~~~~ApAlp~al~ly~~l~~~G~kIf~VSgR~e~~r~aT~ 179 (275)
T TIGR01680 100 EKDTFLFNIDGTALSNIPYYKKHGYGSEKFDSELYDEEFVNKGEAPALPETLKNYNKLVSLGFKIIFLSGRLKDKQAVTE 179 (275)
T ss_pred CCCEEEEECccccccCHHHHHHhcCCCCcCChhhhhHHHHhcccCCCChHHHHHHHHHHHCCCEEEEEeCCchhHHHHHH
Confidence 358999999999873 1134899999999999999999999998877777788
Q ss_pred HHHHhcCCC
Q psy7233 146 VKLKHLGFN 154 (383)
Q Consensus 146 ~~L~~lG~~ 154 (383)
+.|++.|++
T Consensus 180 ~NL~kaGy~ 188 (275)
T TIGR01680 180 ANLKKAGYH 188 (275)
T ss_pred HHHHHcCCC
Confidence 889999987
No 153
>PF03767 Acid_phosphat_B: HAD superfamily, subfamily IIIB (Acid phosphatase); InterPro: IPR005519 This family of class B acid phosphatases also contains a number of vegetative storage proteins (VPS25). The acid phosphatase activity of VPS has been experimentally demonstrated [].; GO: 0003993 acid phosphatase activity; PDB: 3PCT_C 2I34_A 2I33_A 1Z5U_D 1Z5G_A 2AUT_C 1Z88_B 3OCV_A 3OCZ_A 3OCX_A ....
Probab=97.32 E-value=0.00015 Score=67.34 Aligned_cols=62 Identities=29% Similarity=0.413 Sum_probs=53.9
Q ss_pred cCCCEEEEecCCceecCC---------------------------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHH
Q psy7233 93 NSFDTVLTDCDGVLWLEN---------------------------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLI 145 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~~---------------------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~ 145 (383)
+...+|+||+|+|++++. .++|++.++++.++++|+.++++||+....+....
T Consensus 70 ~~~~avv~DIDeTvLsn~~y~~~~~~~~~~~~~~~w~~wv~~~~~~aip~a~~l~~~~~~~G~~V~~iT~R~~~~r~~T~ 149 (229)
T PF03767_consen 70 DKPPAVVFDIDETVLSNSPYYAYLIFGGESFSPEDWDEWVASGKAPAIPGALELYNYARSRGVKVFFITGRPESQREATE 149 (229)
T ss_dssp TSEEEEEEESBTTTEEHHHHHHHHHHHTHHH-CCHHHHHHHCTGGEEETTHHHHHHHHHHTTEEEEEEEEEETTCHHHHH
T ss_pred CCCcEEEEECCcccccCHHHHHHHhhccCCCChHHHHHHHhcccCcccHHHHHHHHHHHHCCCeEEEEecCCchhHHHHH
Confidence 467899999999986531 35899999999999999999999999888888888
Q ss_pred HHHHhcCCC
Q psy7233 146 VKLKHLGFN 154 (383)
Q Consensus 146 ~~L~~lG~~ 154 (383)
+.|.+.|+.
T Consensus 150 ~nL~~~G~~ 158 (229)
T PF03767_consen 150 KNLKKAGFP 158 (229)
T ss_dssp HHHHHHTTS
T ss_pred HHHHHcCCC
Confidence 999999865
No 154
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=97.11 E-value=0.0066 Score=50.70 Aligned_cols=117 Identities=14% Similarity=0.137 Sum_probs=79.9
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCC-ccccCCCCHHHHHHHHHHcCCCCCc
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQRE-PVVIGKPSKLIGSYLIEKYNLNPER 316 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~gKP~p~~~~~al~~lgi~p~e 316 (383)
-.|+++.+.+..|++. +.+++.+.|+.-. +.+... ..|.+ ...+.-.+++.=..+++.++-.-+.
T Consensus 30 klf~ev~e~iqeL~d~-V~i~IASgDr~gs------------l~~lae-~~gi~~~rv~a~a~~e~K~~ii~eLkk~~~k 95 (152)
T COG4087 30 KLFSEVSETIQELHDM-VDIYIASGDRKGS------------LVQLAE-FVGIPVERVFAGADPEMKAKIIRELKKRYEK 95 (152)
T ss_pred EEcHhhHHHHHHHHHh-heEEEecCCcchH------------HHHHHH-HcCCceeeeecccCHHHHHHHHHHhcCCCcE
Confidence 3478889999999987 6665555555322 222222 22222 1223345677777888888876689
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhhh
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFLS 382 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l~ 382 (383)
|+||||. .||+.+.++|.+.-+-+..+.-+..-+. .+|+++.++.|+++++.
T Consensus 96 ~vmVGnG-aND~laLr~ADlGI~tiq~e~v~~r~l~-------------~ADvvik~i~e~ldl~~ 147 (152)
T COG4087 96 VVMVGNG-ANDILALREADLGICTIQQEGVPERLLL-------------TADVVLKEIAEILDLLK 147 (152)
T ss_pred EEEecCC-cchHHHhhhcccceEEeccCCcchHHHh-------------hchhhhhhHHHHHHHhh
Confidence 9999999 9999999999887666654322322222 57999999999999864
No 155
>PF08235 LNS2: LNS2 (Lipin/Ned1/Smp2); InterPro: IPR013209 This domain is found in Saccharomyces cerevisiae (Baker's yeast) protein SMP2, proteins with an N-terminal lipin domain (IPR007651 from INTERPRO) and phosphatidylinositol transfer proteins []. SMP2 is involved in plasmid maintenance and respiration []. Lipin proteins are involved in adipose tissue development and insulin resistance [].
Probab=96.96 E-value=0.0012 Score=57.32 Aligned_cols=41 Identities=27% Similarity=0.426 Sum_probs=36.2
Q ss_pred EEEEecCCceecCC------------ccChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 97 TVLTDCDGVLWLEN------------ELISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 97 aViFDlDGTL~d~~------------~~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
.|++|+||||+.++ ...+|+.++++++.++|+.++++|.++
T Consensus 1 VVvsDIDGTiT~SD~~G~i~~~~G~d~~h~g~~~l~~~i~~~GY~ilYlTaRp 53 (157)
T PF08235_consen 1 VVVSDIDGTITKSDVLGHILPILGKDWTHPGAAELYRKIADNGYKILYLTARP 53 (157)
T ss_pred CEEEeccCCcCccchhhhhhhccCchhhhhcHHHHHHHHHHCCeEEEEECcCc
Confidence 38999999999874 456999999999999999999999854
No 156
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=96.90 E-value=0.0013 Score=60.16 Aligned_cols=36 Identities=17% Similarity=-0.109 Sum_probs=27.3
Q ss_pred HHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEc
Q psy7233 305 YLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVL 342 (383)
Q Consensus 305 ~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~ 342 (383)
.+.+.+|.+.+.+.+-||| .+|+.|...||-. +.|+
T Consensus 166 rl~~~~~~~~~~~~aYsDS-~~D~pmL~~a~~~-~~Vn 201 (210)
T TIGR01545 166 QLEQKIGSPLKLYSGYSDS-KQDNPLLAFCEHR-WRVS 201 (210)
T ss_pred HHHHHhCCChhheEEecCC-cccHHHHHhCCCc-EEEC
Confidence 3444456567788999999 9999999999944 4453
No 157
>KOG1615|consensus
Probab=96.81 E-value=0.0047 Score=55.02 Aligned_cols=33 Identities=30% Similarity=0.354 Sum_probs=26.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHH
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYN 333 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~ 333 (383)
|| ++++....+ |..-+.++||||. .+|+++-.-
T Consensus 159 gK--a~~i~~lrk--~~~~~~~~mvGDG-atDlea~~p 191 (227)
T KOG1615|consen 159 GK--AEVIALLRK--NYNYKTIVMVGDG-ATDLEAMPP 191 (227)
T ss_pred cc--HHHHHHHHh--CCChheeEEecCC-ccccccCCc
Confidence 55 555777666 8888999999999 999987665
No 158
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=96.64 E-value=0.0049 Score=54.43 Aligned_cols=48 Identities=21% Similarity=0.137 Sum_probs=35.4
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCCh
Q psy7233 300 KLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTM 348 (383)
Q Consensus 300 p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~ 348 (383)
..-|..+.+..|++.+++++|.|. ...+.-.+..|+.+++|..|....
T Consensus 110 ~~Hf~~i~~~tgI~y~eMlFFDDe-~~N~~~v~~lGV~~v~v~~Glt~~ 157 (169)
T PF12689_consen 110 TTHFRRIHRKTGIPYEEMLFFDDE-SRNIEVVSKLGVTCVLVPDGLTWD 157 (169)
T ss_dssp HHHHHHHHHHH---GGGEEEEES--HHHHHHHHTTT-EEEE-SSS--HH
T ss_pred HHHHHHHHHhcCCChhHEEEecCc-hhcceeeEecCcEEEEeCCCCCHH
Confidence 556888999999999999999999 777999999999999999996653
No 159
>COG3769 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=96.54 E-value=0.0056 Score=55.60 Aligned_cols=58 Identities=28% Similarity=0.318 Sum_probs=46.6
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
....||.|+||||++...=+..|...+..++..|.+++++|. +++.+....-+.+|+.
T Consensus 6 ~~~lIFtDlD~TLl~~~ye~~pA~pv~~el~d~G~~Vi~~SS---KT~aE~~~l~~~l~v~ 63 (274)
T COG3769 6 MPLLIFTDLDGTLLPHSYEWQPAAPVLLELKDAGVPVILCSS---KTRAEMLYLQKSLGVQ 63 (274)
T ss_pred cceEEEEcccCcccCCCCCCCccchHHHHHHHcCCeEEEecc---chHHHHHHHHHhcCCC
Confidence 467999999999999333345577889999999999999886 7777777666678876
No 160
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=96.39 E-value=0.017 Score=64.09 Aligned_cols=135 Identities=16% Similarity=0.114 Sum_probs=81.3
Q ss_pred EEEec--cCCCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcch---------HH-----HHHHHhcCCCc
Q psy7233 230 VVVGF--DSHISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGS---------MV-----AAVKTGAQREP 292 (383)
Q Consensus 230 Vv~g~--~~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~---------l~-----~~~~~~~~~~~ 292 (383)
.++|+ -....++++.++++.+++.|+++ ++|+ |............|... -. ..+...... .
T Consensus 518 ~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTG-D~~~tA~~ia~~~Gi~~~~~~~v~g~~l~~~~~~~l~~~~~~-~ 595 (884)
T TIGR01522 518 TFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITG-DSQETAVSIARRLGMPSKTSQSVSGEKLDAMDDQQLSQIVPK-V 595 (884)
T ss_pred EEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECC-CCHHHHHHHHHHcCCCCCCCceeEhHHhHhCCHHHHHHHhhc-C
Confidence 44553 34456899999999999999987 4454 33211100000111100 00 001111111 1
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe-
Q psy7233 293 VVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL- 371 (383)
Q Consensus 293 ~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi- 371 (383)
..++.++|+--..+.+.+.-..+.+.|+||+ .+|+.++++|+ |+|..|.+. .+.++. .||+++
T Consensus 596 ~Vfar~~P~~K~~iv~~lq~~g~~v~mvGDG-vND~pAl~~Ad---VGia~g~~g-~~va~~-----------aaDivl~ 659 (884)
T TIGR01522 596 AVFARASPEHKMKIVKALQKRGDVVAMTGDG-VNDAPALKLAD---IGVAMGQTG-TDVAKE-----------AADMILT 659 (884)
T ss_pred eEEEECCHHHHHHHHHHHHHCCCEEEEECCC-cccHHHHHhCC---eeEecCCCc-CHHHHH-----------hcCEEEc
Confidence 2445566766666666666556899999999 99999999999 677777432 233321 589999
Q ss_pred -CCHhhHHHhhh
Q psy7233 372 -SSLGDMLPFLS 382 (383)
Q Consensus 372 -~sl~eL~~~l~ 382 (383)
+++..+.++++
T Consensus 660 dd~~~~i~~~i~ 671 (884)
T TIGR01522 660 DDDFATILSAIE 671 (884)
T ss_pred CCCHHHHHHHHH
Confidence 77999988764
No 161
>COG2503 Predicted secreted acid phosphatase [General function prediction only]
Probab=96.28 E-value=0.0071 Score=55.66 Aligned_cols=62 Identities=27% Similarity=0.441 Sum_probs=52.3
Q ss_pred CCCEEEEecCCceecCC---------------------------ccChhHHHHHHHHHHcCceEEEEcCCCCCC-HHHHH
Q psy7233 94 SFDTVLTDCDGVLWLEN---------------------------ELISGADQVMNSLKSLGKKIFYVTNNSTKT-REQLI 145 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~---------------------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~-~~~~~ 145 (383)
+-++|+.|+|-|++|.. .++|||.++++...++|..++++||+.... .....
T Consensus 78 K~~aVvlDlDETvLdNs~Yqgy~v~nnk~f~pe~Wd~wV~a~~sk~vpGA~eFl~Yvn~~Gg~ifyiSNR~~~~~~~~T~ 157 (274)
T COG2503 78 KKKAVVLDLDETVLDNSAYQGYQVLNNKGFTPETWDKWVQAKKSKAVPGAVEFLNYVNSNGGKIFYISNRDQENEKDGTI 157 (274)
T ss_pred CCceEEEecchHhhcCccccchhhhcCCCCCccchHHHHhhcccccCccHHHHHHHHHhcCcEEEEEeccchhcccchhH
Confidence 34599999999998843 249999999999999999999999977666 55678
Q ss_pred HHHHhcCCCC
Q psy7233 146 VKLKHLGFNA 155 (383)
Q Consensus 146 ~~L~~lG~~i 155 (383)
+.|.+.|++.
T Consensus 158 ~nLk~~g~~~ 167 (274)
T COG2503 158 ENLKSEGLPQ 167 (274)
T ss_pred HHHHHcCccc
Confidence 8899999884
No 162
>smart00577 CPDc catalytic domain of ctd-like phosphatases.
Probab=96.22 E-value=0.013 Score=50.35 Aligned_cols=54 Identities=17% Similarity=0.060 Sum_probs=40.5
Q ss_pred CEEEEecCCceecCC---------------------------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHH
Q psy7233 96 DTVLTDCDGVLWLEN---------------------------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKL 148 (383)
Q Consensus 96 kaViFDlDGTL~d~~---------------------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L 148 (383)
..+++|+||||+.+. .+.||+.++|+.++ +++++.++|+.... .....+
T Consensus 3 ~~lvldld~tl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~pG~~e~L~~L~-~~~~l~I~Ts~~~~---~~~~il 78 (148)
T smart00577 3 KTLVLDLDETLVHSTHRSFKEWTNRDFIVPVLIDGHPHGVYVKKRPGVDEFLKRAS-ELFELVVFTAGLRM---YADPVL 78 (148)
T ss_pred cEEEEeCCCCeECCCCCcCCCCCccceEEEEEeCCceEEEEEEECCCHHHHHHHHH-hccEEEEEeCCcHH---HHHHHH
Confidence 578999999999852 24899999999998 57999999994333 333345
Q ss_pred HhcCC
Q psy7233 149 KHLGF 153 (383)
Q Consensus 149 ~~lG~ 153 (383)
+.+|+
T Consensus 79 ~~l~~ 83 (148)
T smart00577 79 DLLDP 83 (148)
T ss_pred HHhCc
Confidence 55555
No 163
>PF06888 Put_Phosphatase: Putative Phosphatase; InterPro: IPR016965 This group represents phosphatases related to PHOSPHO1 and PHOSPHO2 []. It includes plant phosphatases with homology to the haloacid dehalogenase (HAD) superfamily [, ]. PHOSPHO1 is a phosphoethanolamine/phosphocholine phosphatase [], while PHOSPHO2 has high activity toward pyridoxal 5'-phosphate (PLP), and it is active at much lower level toward pyrophosphate, phosphoethanolamine (PEA)and phosphocholine (PCho) []. ; GO: 0016791 phosphatase activity
Probab=96.19 E-value=0.2 Score=46.67 Aligned_cols=52 Identities=15% Similarity=0.123 Sum_probs=38.3
Q ss_pred HHHHHHHHHHc---CCCCCcEEEEecCchhhHHHHHHcCC-cEEEEcCCCCChHHHH
Q psy7233 300 KLIGSYLIEKY---NLNPERTLMIGDRGNTDIRLGYNNGF-QTLLVLTGDTTMEKAI 352 (383)
Q Consensus 300 p~~~~~al~~l---gi~p~e~l~IGDs~~~DI~~A~~aGl-~tv~V~~G~~~~~~~~ 352 (383)
..+++..++.. |+.-+++++|||+ .+|+=.+...+- +.++...|+.-..-+.
T Consensus 152 ~~il~~~~~~~~~~g~~~~rviYiGDG-~nD~Cp~~~L~~~D~v~~R~~~~l~~~i~ 207 (234)
T PF06888_consen 152 GKILERLLQEQAQRGVPYDRVIYIGDG-RNDFCPALRLRPRDVVFPRKGYPLHKLIQ 207 (234)
T ss_pred HHHHHHHHHHHhhcCCCcceEEEECCC-CCCcCcccccCCCCEEecCCCChHHHHHh
Confidence 55666666663 7888999999999 999999988765 5677777754333333
No 164
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=95.97 E-value=0.00033 Score=61.45 Aligned_cols=95 Identities=13% Similarity=0.119 Sum_probs=63.0
Q ss_pred hhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEEE
Q psy7233 241 PKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLMI 320 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~I 320 (383)
|++.+.|..+.+..-.++.|+....+.. .....++... ..+....+++.....||+ |.+.++.+|.+++++++|
T Consensus 45 Pgl~eFL~~l~~~yei~I~Ts~~~~yA~-~il~~ldp~~--~~f~~~l~r~~~~~~~~~---~~K~L~~l~~~~~~vIiV 118 (162)
T TIGR02251 45 PHVDEFLERVSKWYELVIFTASLEEYAD-PVLDILDRGG--KVISRRLYRESCVFTNGK---YVKDLSLVGKDLSKVIII 118 (162)
T ss_pred CCHHHHHHHHHhcCEEEEEcCCcHHHHH-HHHHHHCcCC--CEEeEEEEccccEEeCCC---EEeEchhcCCChhhEEEE
Confidence 5688899999876445677876665432 1111122110 123334445544455665 788899999999999999
Q ss_pred ecCchhhHHHHHHcCCcEEEEc
Q psy7233 321 GDRGNTDIRLGYNNGFQTLLVL 342 (383)
Q Consensus 321 GDs~~~DI~~A~~aGl~tv~V~ 342 (383)
||+ ..|+.++.++|+......
T Consensus 119 DD~-~~~~~~~~~NgI~i~~f~ 139 (162)
T TIGR02251 119 DNS-PYSYSLQPDNAIPIKSWF 139 (162)
T ss_pred eCC-hhhhccCccCEeecCCCC
Confidence 999 889999999997655433
No 165
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=95.93 E-value=0.25 Score=54.22 Aligned_cols=55 Identities=11% Similarity=0.082 Sum_probs=42.4
Q ss_pred CCEEEEecCCceecCC---------ccChhHHHHHHHHHHc-CceEEEEcCCCCCCHHHHHHHHHhcC
Q psy7233 95 FDTVLTDCDGVLWLEN---------ELISGADQVMNSLKSL-GKKIFYVTNNSTKTREQLIVKLKHLG 152 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~---------~~~p~A~eal~~l~~~-Gi~v~ivTn~~~~~~~~~~~~L~~lG 152 (383)
-++++||.||||.... .+.|+..+.|++|.+. +..++++|+ |+.+.+.+.+...+
T Consensus 507 ~rll~LDyDGTL~~~~~~~~~p~~a~p~~~l~~~L~~L~~d~~~~V~IvSG---R~~~~L~~~~~~~~ 571 (797)
T PLN03063 507 NRLLILGFYGTLTEPRNSQIKEMDLGLHPELKETLKALCSDPKTTVVVLSR---SGKDILDKNFGEYN 571 (797)
T ss_pred CeEEEEecCccccCCCCCccccccCCCCHHHHHHHHHHHcCCCCEEEEEeC---CCHHHHHHHhCCCC
Confidence 4799999999998542 2567888999999876 678999998 67777766664433
No 166
>PF12689 Acid_PPase: Acid Phosphatase; InterPro: IPR010036 This entry represents two closely related clades of sequences from eukaryotes and archaea. The mouse enzyme has been characterised as a phosphatase and has been positively identified as a member of the haloacid dehalogenase (HAD) superfamily by site-directed mutagenesis of the active site residues [, ].; GO: 0016791 phosphatase activity; PDB: 1U7P_A 1U7O_A 2WM8_A.
Probab=95.83 E-value=0.0027 Score=56.09 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=15.8
Q ss_pred ChhhHHHHHHHhhCCCCEEEEec
Q psy7233 239 SFPKLMKAACYLTNPNTLFVATN 261 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~i~tn 261 (383)
-|+++..+|..|+++|+++.+.+
T Consensus 46 lypdv~~iL~~L~~~gv~lavAS 68 (169)
T PF12689_consen 46 LYPDVPEILQELKERGVKLAVAS 68 (169)
T ss_dssp --TTHHHHHHHHHHCT--EEEEE
T ss_pred eCcCHHHHHHHHHHCCCEEEEEE
Confidence 48999999999999999875443
No 167
>PF02358 Trehalose_PPase: Trehalose-phosphatase; InterPro: IPR003337 Trehalose-phosphatases 3.1.3.12 from EC catalyse the de-phosphorylation of trehalose-6-phosphate to trehalose and orthophosphate. Trehalose is a common disaccharide of bacteria, fungi and invertebrates that appears to play a major role in desiccation tolerance. A pathway for trehalose biosynthesis may also exist in plants []. The trehalose-phosphatase signature is found in the C terminus of trehalose-6-phosphate synthase 2.4.1.15 from EC adjacent to the trehalose-6-phosphate synthase domain (see IPR001830 from INTERPRO). It would appear that the two equivalent genes in the Escherichia coli otsBA operon: otsA, the trehalose-6-phosphate synthase and otsB, trehalose-phosphatase (this family) have undergone gene fusion in most eukaryotes [].; GO: 0003824 catalytic activity, 0005992 trehalose biosynthetic process; PDB: 1U02_A.
Probab=95.69 E-value=0.05 Score=50.44 Aligned_cols=45 Identities=22% Similarity=0.094 Sum_probs=29.2
Q ss_pred CHHHHHHHHHHcCCC---CCcEEEEecCchhhHHHHHHcCCc-----EEEEcCC
Q psy7233 299 SKLIGSYLIEKYNLN---PERTLMIGDRGNTDIRLGYNNGFQ-----TLLVLTG 344 (383)
Q Consensus 299 ~p~~~~~al~~lgi~---p~e~l~IGDs~~~DI~~A~~aGl~-----tv~V~~G 344 (383)
+..+...+++.++.. +.-++++||+ .+|-.|.+.+.-. ++.|.++
T Consensus 166 KG~av~~ll~~~~~~~~~~~~~l~~GDD-~tDE~~f~~~~~~~~~~~~i~V~~~ 218 (235)
T PF02358_consen 166 KGSAVRRLLEELPFAGPKPDFVLYIGDD-RTDEDAFRALRELEEGGFGIKVGSV 218 (235)
T ss_dssp HHHHHHHHHTTS---------EEEEESS-HHHHHHHHTTTTS----EEEEES--
T ss_pred hHHHHHHHHHhcCccccccceeEEecCC-CCCHHHHHHHHhcccCCCCeEEEee
Confidence 366677777777765 7889999999 9999999987654 5666554
No 168
>TIGR01459 HAD-SF-IIA-hyp4 HAD-superfamily class IIA hydrolase, TIGR01459. This hypothetical equivalog is a member of the Class IIA subfamily of the haloacid dehalogenase superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this equivalog are all gram negative and primarily alpha proteobacteria. Only one sequence hase been annotated as other than "hypothetical." That one, from Brucella, is annotated as related to NagD, but only by sequence similarity and should be treated with some skepticism. (See comments for Class IIA subfamily)
Probab=95.21 E-value=0.0088 Score=55.76 Aligned_cols=94 Identities=9% Similarity=0.046 Sum_probs=58.0
Q ss_pred cCCCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHH-HHHHhcCCCccccCCCCHHHHHHHHHHcCC
Q psy7233 235 DSHISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVA-AVKTGAQREPVVIGKPSKLIGSYLIEKYNL 312 (383)
Q Consensus 235 ~~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~gKP~p~~~~~al~~lgi 312 (383)
.....|++..+++..|+++|+++ ++||..+... ... ..+....+.. .++.+.+..... ...+..+++++|+
T Consensus 21 ~~~~~~pga~e~L~~L~~~G~~~~ivTN~~~~~~-~~~-~~L~~~gl~~~~~~~Ii~s~~~~-----~~~l~~~~~~~~~ 93 (242)
T TIGR01459 21 DGNHTYPGAVQNLNKIIAQGKPVYFVSNSPRNIF-SLH-KTLKSLGINADLPEMIISSGEIA-----VQMILESKKRFDI 93 (242)
T ss_pred cCCccCccHHHHHHHHHHCCCEEEEEeCCCCChH-HHH-HHHHHCCCCccccceEEccHHHH-----HHHHHhhhhhccC
Confidence 34456899999999999999876 8889655322 100 0111111111 223222222111 2456777788899
Q ss_pred CCCcEEEEecCchhhHHHHHHcCC
Q psy7233 313 NPERTLMIGDRGNTDIRLGYNNGF 336 (383)
Q Consensus 313 ~p~e~l~IGDs~~~DI~~A~~aGl 336 (383)
.|+++++|||+ ..|+.....+|.
T Consensus 94 ~~~~~~~vGd~-~~d~~~~~~~~~ 116 (242)
T TIGR01459 94 RNGIIYLLGHL-ENDIINLMQCYT 116 (242)
T ss_pred CCceEEEeCCc-ccchhhhcCCCc
Confidence 99999999999 778877765554
No 169
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=95.18 E-value=0.12 Score=57.54 Aligned_cols=137 Identities=15% Similarity=0.113 Sum_probs=77.3
Q ss_pred cEEEEec--cCCCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcc---------hHH-HHHHH--------h
Q psy7233 228 GAVVVGF--DSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTG---------SMV-AAVKT--------G 287 (383)
Q Consensus 228 ~~Vv~g~--~~~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~---------~l~-~~~~~--------~ 287 (383)
+-.++|. -+....+++.++++.+++.|++++....|............|.. .+. ..++. .
T Consensus 525 ~l~~lGl~~~~Dplr~~v~e~I~~l~~aGI~v~miTGD~~~tA~~ia~~~gi~~~~~~v~~~~~~g~~l~~~~~~~~~~~ 604 (917)
T TIGR01116 525 DLTFIGVVGMLDPPRPEVADAIEKCRTAGIRVIMITGDNKETAEAICRRIGIFSPDEDVTFKSFTGREFDEMGPAKQRAA 604 (917)
T ss_pred CcEEEEEeeeeCCCchhHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHcCCCCCCccccceeeeHHHHhhCCHHHHHHh
Confidence 4456664 34455799999999999999987444344321100000000000 000 00110 0
Q ss_pred cCCCccccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCc
Q psy7233 288 AQREPVVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVA 367 (383)
Q Consensus 288 ~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~p 367 (383)
.. ....++.-.|+-=..+.+.++-..+.+.|+||+ .||+.|.++||+ .|..|.+. +.... .+
T Consensus 605 ~~-~~~v~ar~~P~~K~~iV~~lq~~g~~va~iGDG-~ND~~alk~AdV---Gia~g~g~-~~ak~------------aA 666 (917)
T TIGR01116 605 CR-SAVLFSRVEPSHKSELVELLQEQGEIVAMTGDG-VNDAPALKKADI---GIAMGSGT-EVAKE------------AS 666 (917)
T ss_pred hh-cCeEEEecCHHHHHHHHHHHHhcCCeEEEecCC-cchHHHHHhCCe---eEECCCCc-HHHHH------------hc
Confidence 00 012233334443355555666556789999999 999999999995 56556433 22222 58
Q ss_pred cEEeCC--HhhHHHhhh
Q psy7233 368 DYYLSS--LGDMLPFLS 382 (383)
Q Consensus 368 d~vi~s--l~eL~~~l~ 382 (383)
|+++.+ +..+.+++.
T Consensus 667 D~vl~dd~f~~i~~~i~ 683 (917)
T TIGR01116 667 DMVLADDNFATIVAAVE 683 (917)
T ss_pred CeEEccCCHHHHHHHHH
Confidence 999977 988887764
No 170
>PF03031 NIF: NLI interacting factor-like phosphatase; InterPro: IPR004274 The function of this domain is unclear. It is found in proteins of diverse function including phosphatases some of which may be active in active in ternary elongation complexes and a number of NLI interacting factors. In the phospatases this domain is often present N-terminal to the BRCT domain (IPR001357 from INTERPRO).; GO: 0005515 protein binding; PDB: 3L0Y_A 2GHQ_A 3PGL_A 3L0C_B 1TA0_A 2GHT_A 3L0B_B 1T9Z_A 3QLE_A 2Q5E_E ....
Probab=95.16 E-value=0.012 Score=50.93 Aligned_cols=41 Identities=29% Similarity=0.370 Sum_probs=30.0
Q ss_pred CEEEEecCCceecCCc--------------------cChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 96 DTVLTDCDGVLWLENE--------------------LISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 96 kaViFDlDGTL~d~~~--------------------~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
|.++||+||||+.+.. .-|++.++|+.+ +....+++.|..+
T Consensus 1 k~LVlDLD~TLv~~~~~~~~~~~~~~~~~~~~~~v~~RP~l~~FL~~l-~~~~ev~i~T~~~ 61 (159)
T PF03031_consen 1 KTLVLDLDGTLVHSSSKSPLPYDFKIIDQRGGYYVKLRPGLDEFLEEL-SKHYEVVIWTSAS 61 (159)
T ss_dssp EEEEEE-CTTTEEEESSTCTT-SEEEETEEEEEEEEE-TTHHHHHHHH-HHHCEEEEE-SS-
T ss_pred CEEEEeCCCcEEEEeecCCCCcccceeccccceeEeeCchHHHHHHHH-HHhceEEEEEeeh
Confidence 4799999999987531 469999999998 4458999999844
No 171
>COG1877 OtsB Trehalose-6-phosphatase [Carbohydrate transport and metabolism]
Probab=95.14 E-value=0.98 Score=42.85 Aligned_cols=53 Identities=13% Similarity=0.045 Sum_probs=40.6
Q ss_pred CCCEEEEecCCceecC------CccChhHHHHHHHHHHc-CceEEEEcCCCCCCHHHHHHHHH
Q psy7233 94 SFDTVLTDCDGVLWLE------NELISGADQVMNSLKSL-GKKIFYVTNNSTKTREQLIVKLK 149 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~------~~~~p~A~eal~~l~~~-Gi~v~ivTn~~~~~~~~~~~~L~ 149 (383)
+-++++||.||||... ..+.++..+.|++|.++ ...++++|+ ++.+.+...+.
T Consensus 17 ~~~~~~lDyDGTl~~i~~~p~~a~~~~~l~~lL~~Las~~~~~v~iiSG---R~~~~l~~~~~ 76 (266)
T COG1877 17 RKRLLFLDYDGTLTEIVPHPEAAVPDDRLLSLLQDLASDPRNVVAIISG---RSLAELERLFG 76 (266)
T ss_pred cceEEEEeccccccccccCccccCCCHHHHHHHHHHHhcCCCeEEEEeC---CCHHHHHHhcC
Confidence 4689999999999874 24568889999999998 457889998 56665555443
No 172
>PF11019 DUF2608: Protein of unknown function (DUF2608); InterPro: IPR022565 This family is conserved in Bacteria. The function is not known.
Probab=95.07 E-value=0.33 Score=45.76 Aligned_cols=48 Identities=17% Similarity=0.359 Sum_probs=38.5
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHH----HHHcCCcEEEEcCC
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRL----GYNNGFQTLLVLTG 344 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~----A~~aGl~tv~V~~G 344 (383)
|-++..++..++.++|..|+.+++|.|+ ...+.. .++.|+..+++.+.
T Consensus 160 ~~~KG~~L~~fL~~~~~~pk~IIfIDD~-~~nl~sv~~a~k~~~I~f~G~~Yt 211 (252)
T PF11019_consen 160 GQDKGEVLKYFLDKINQSPKKIIFIDDN-KENLKSVEKACKKSGIDFIGFHYT 211 (252)
T ss_pred CCccHHHHHHHHHHcCCCCCeEEEEeCC-HHHHHHHHHHHhhCCCcEEEEEEc
Confidence 4455789999999999999999999999 666754 34568888877554
No 173
>PF05761 5_nucleotid: 5' nucleotidase family; InterPro: IPR008380 This family includes a 5'-nucleotidase, 3.1.3.5 from EC, specific for purines (IMP and GMP) []. These enzymes are members of the Haloacid Dehalogenase (HAD) superfamily. HAD members are recognised by three short motifs {hhhhDxDx(T/V)}, {hhhh(T/S)}, and either {hhhh(D/E)(D/E)x(3-4)(G/N)} or {hhhh(G/N)(D/E)x(3-4)(D/E)} (where "h" stands for a hydrophobic residue). Crystal structures of many HAD enzymes has verified PSI-PRED predictions of secondary structural elements which show each of the "hhhh" sequences of the motifs as part of beta sheets. This subfamily of enzymes is part of "Subfamily I" of the HAD superfamily by virtue of a "cap" domain in between motifs 1 and 2. This subfamily's cap domain has a different predicted secondary structure than all other known HAD enzymes and thus has been designated "subfamily IG", the domain appears to consist of a mixed alpha/beta fold.; PDB: 2BDE_A 2XCW_A 2XCX_A 2XCV_A 2XJB_A 2JCM_A 2XJE_A 2J2C_A 2XJF_A 2XJD_A ....
Probab=94.57 E-value=0.0083 Score=60.98 Aligned_cols=43 Identities=19% Similarity=0.174 Sum_probs=33.8
Q ss_pred HHHHHHHcCCCCCcEEEEecCchhhHHHHHHc-CCcEEEEcCCC
Q psy7233 303 GSYLIEKYNLNPERTLMIGDRGNTDIRLGYNN-GFQTLLVLTGD 345 (383)
Q Consensus 303 ~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~a-Gl~tv~V~~G~ 345 (383)
...+.+.+|....++++|||++..||...+.. |++|++|-.-.
T Consensus 284 ~~~l~~ll~~~g~~VLY~GDhi~~Di~~~k~~~gWrT~~Ii~EL 327 (448)
T PF05761_consen 284 WDQLHKLLGWRGKEVLYFGDHIYGDILKSKKRHGWRTAAIIPEL 327 (448)
T ss_dssp HHHHHHHCT--GGGEEEEESSTTTTHHHHHHHH-SEEEEE-TTH
T ss_pred HHHHHHHHccCCCeEEEECCchhhhhhhhccccceEEEEEehhh
Confidence 46667778888899999999999999999887 99999996653
No 174
>COG4996 Predicted phosphatase [General function prediction only]
Probab=94.49 E-value=0.13 Score=43.10 Aligned_cols=56 Identities=18% Similarity=0.304 Sum_probs=40.0
Q ss_pred CEEEEecCCceecCCc-------------------------cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHh
Q psy7233 96 DTVLTDCDGVLWLENE-------------------------LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKH 150 (383)
Q Consensus 96 kaViFDlDGTL~d~~~-------------------------~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~ 150 (383)
++|.||.||||||.+. +++...+.+..++..|.-+-.+|=| -.....+.|+.
T Consensus 1 ~~i~~d~d~t~wdhh~iSsl~pPf~rVs~n~i~Ds~G~ev~L~~~v~~~l~warnsG~i~~~~sWN---~~~kA~~aLra 77 (164)
T COG4996 1 RAIVFDADKTLWDHHNISSLEPPFRRVSSNTIEDSKGREVHLFPDVKETLKWARNSGYILGLASWN---FEDKAIKALRA 77 (164)
T ss_pred CcEEEeCCCcccccccchhcCCcceecCccceecCCCeEEEEcHHHHHHHHHHHhCCcEEEEeecC---chHHHHHHHHH
Confidence 4799999999999642 3778888899999888766555532 33445566766
Q ss_pred cCCC
Q psy7233 151 LGFN 154 (383)
Q Consensus 151 lG~~ 154 (383)
+|+.
T Consensus 78 l~~~ 81 (164)
T COG4996 78 LDLL 81 (164)
T ss_pred hchh
Confidence 7654
No 175
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=94.49 E-value=0.65 Score=50.09 Aligned_cols=109 Identities=17% Similarity=0.127 Sum_probs=63.1
Q ss_pred hhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCcccc-CCCCHHHHHHHHHHcCCCCCcEEE
Q psy7233 241 PKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVI-GKPSKLIGSYLIEKYNLNPERTLM 319 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-gKP~p~~~~~al~~lgi~p~e~l~ 319 (383)
++..+++..|++.|++.+.-..|.... ++.+..-.|.+.+.. -+|.- =....+++.-.-..+.|
T Consensus 540 ~~a~~aI~~L~~~Gi~~~mLTGDn~~~-------------A~~iA~~lGId~v~AellPed--K~~~V~~l~~~g~~Vam 604 (713)
T COG2217 540 PDAKEAIAALKALGIKVVMLTGDNRRT-------------AEAIAKELGIDEVRAELLPED--KAEIVRELQAEGRKVAM 604 (713)
T ss_pred hhHHHHHHHHHHCCCeEEEEcCCCHHH-------------HHHHHHHcChHhheccCCcHH--HHHHHHHHHhcCCEEEE
Confidence 778999999999999864433344322 222222233222211 23331 12223333222278999
Q ss_pred EecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhh
Q psy7233 320 IGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFL 381 (383)
Q Consensus 320 IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l 381 (383)
|||. .||-.+...|- |.|..|.++.-..+ -+|.++ +++..+.+.+
T Consensus 605 VGDG-INDAPALA~Ad---VGiAmG~GtDvA~e-------------aADvvL~~~dL~~v~~ai 651 (713)
T COG2217 605 VGDG-INDAPALAAAD---VGIAMGSGTDVAIE-------------AADVVLMRDDLSAVPEAI 651 (713)
T ss_pred EeCC-chhHHHHhhcC---eeEeecCCcHHHHH-------------hCCEEEecCCHHHHHHHH
Confidence 9999 99999999988 67776765432223 346544 4577776654
No 176
>COG4359 Uncharacterized conserved protein [Function unknown]
Probab=94.35 E-value=1.2 Score=39.66 Aligned_cols=26 Identities=15% Similarity=0.190 Sum_probs=21.5
Q ss_pred cCCCCCcEEEEecCchhhHHHHHHcCC
Q psy7233 310 YNLNPERTLMIGDRGNTDIRLGYNNGF 336 (383)
Q Consensus 310 lgi~p~e~l~IGDs~~~DI~~A~~aGl 336 (383)
+.-.++.++|+||+ .+|+.+|+...+
T Consensus 155 l~e~~e~~fy~GDs-vsDlsaaklsDl 180 (220)
T COG4359 155 LSEPNESIFYCGDS-VSDLSAAKLSDL 180 (220)
T ss_pred hhcCCceEEEecCC-cccccHhhhhhh
Confidence 33456779999999 999999998874
No 177
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=94.11 E-value=1.7 Score=48.62 Aligned_cols=59 Identities=17% Similarity=0.225 Sum_probs=41.9
Q ss_pred EecCCceecCCccChhHHHHHHHHH----HcCceEEEEcCCCCCCHHHHHHHHHhcCCCC-CcCcccchHH
Q psy7233 100 TDCDGVLWLENELISGADQVMNSLK----SLGKKIFYVTNNSTKTREQLIVKLKHLGFNA-EPNEIIGTAY 165 (383)
Q Consensus 100 FDlDGTL~d~~~~~p~A~eal~~l~----~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i-~~~~i~~s~~ 165 (383)
.|+|+| . + ..+...+.++.++ ...+.++++|+ ++...+.+.|++.|++. .+|-++++.+
T Consensus 777 ~D~d~~-~-~--~~~~l~~~~~~~~~~~~~~~igfv~aTG---R~l~~~~~~l~~~~lp~~~PD~lI~~vG 840 (1050)
T TIGR02468 777 VDCYDD-K-D--LLQIIKNIFEAVRKERMEGSSGFILSTS---MTISEIQSFLKSGGLNPTDFDALICNSG 840 (1050)
T ss_pred eccCCC-C-C--hHHHHHHHHHHHhccccCCceEEEEEcC---CCHHHHHHHHHhCCCCCCCCCEEEeCCC
Confidence 599999 2 2 2334445566665 22377889998 88999999999999985 7777776554
No 178
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=93.97 E-value=0.083 Score=47.33 Aligned_cols=31 Identities=23% Similarity=0.381 Sum_probs=21.4
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTK 139 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~ 139 (383)
+.+++|||.+++++|.+.|...+++|.++..
T Consensus 71 ~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~ 101 (191)
T PF06941_consen 71 NLPPIPGAVEALKKLRDKGHEIVIITARPPE 101 (191)
T ss_dssp T--B-TTHHHHHHHHHTSTTEEEEEEE-SSS
T ss_pred CCCccHHHHHHHHHHHHcCCcEEEEEecCcc
Confidence 3346899999999999998777777765544
No 179
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=93.26 E-value=0.094 Score=46.28 Aligned_cols=21 Identities=29% Similarity=0.640 Sum_probs=19.3
Q ss_pred CCCCCcEEEEecCchhhHHHHH
Q psy7233 311 NLNPERTLMIGDRGNTDIRLGY 332 (383)
Q Consensus 311 gi~p~e~l~IGDs~~~DI~~A~ 332 (383)
+..+.++++|||+ .+|+.+++
T Consensus 172 ~~~~~~~~~iGDs-~~D~~~lr 192 (192)
T PF12710_consen 172 DIDPDRVIAIGDS-INDLPMLR 192 (192)
T ss_dssp THTCCEEEEEESS-GGGHHHHH
T ss_pred CCCCCeEEEEECC-HHHHHHhC
Confidence 7788999999999 99999875
No 180
>TIGR02251 HIF-SF_euk Dullard-like phosphatase domain. This domain is related to domains found in FCP1-like phosphatases (TIGR02250), and together both are detected by the Pfam model pfam03031.
Probab=93.06 E-value=0.17 Score=44.31 Aligned_cols=41 Identities=15% Similarity=0.156 Sum_probs=32.9
Q ss_pred CEEEEecCCceecCC--c-----------------------cChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 96 DTVLTDCDGVLWLEN--E-----------------------LISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 96 kaViFDlDGTL~d~~--~-----------------------~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
+.+++|+|+||+.+. . .-||+.++|..+.+. ..+++.|+.+
T Consensus 2 ~~lvlDLDeTLi~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~RPgl~eFL~~l~~~-yei~I~Ts~~ 67 (162)
T TIGR02251 2 KTLVLDLDETLVHSTFKMPKVDADFKVPVLIDGKIIPVYVFKRPHVDEFLERVSKW-YELVIFTASL 67 (162)
T ss_pred cEEEEcCCCCcCCCCCCCCCCCCceEEEEEecCcEEEEEEEECCCHHHHHHHHHhc-CEEEEEcCCc
Confidence 478999999998642 1 248899999999887 8999999843
No 181
>TIGR01428 HAD_type_II 2-haloalkanoic acid dehalogenase, type II. Note that the Type I HAD enzymes have not yet been fully characterized, but clearly utilize a substantially different catalytic mechanism and are thus unlikely to be related.
Probab=92.55 E-value=0.72 Score=41.11 Aligned_cols=51 Identities=16% Similarity=0.236 Sum_probs=39.0
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
..++|++.++++.|+++|+++.++||. +...+...++.+|+.-..+.++++
T Consensus 91 ~~~~~~~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~gl~~~fd~i~~s 141 (198)
T TIGR01428 91 LPPHPDVPAGLRALKERGYRLAILSNG---SPAMLKSLVKHAGLDDPFDAVLSA 141 (198)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHCCChhhhheeEeh
Confidence 357899999999999999999999993 445566667778875334555554
No 182
>TIGR01106 ATPase-IIC_X-K sodium or proton efflux -- potassium uptake antiporter, P-type ATPase, alpha subunit. Sequences from Blastocladiella emersonii (GP|6636502, GP|6636502 and PIR|T43025), C. elegans (GP|2315419, GP|6671808 and PIR|T31763) and Drosophila melanogaster (GP|7291424) score below trusted cutoff, apparently due to long branch length (excessive divergence from the last common ancestor) as evidenced by a phylogenetic tree. Experimental evidence is needed to determine whether these sequences represent ATPases with conserved function. Aside from fragments, other sequences between trusted and noise appear to be bacterial ATPases of unclear lineage, but most likely calcium pumps.
Probab=92.44 E-value=1.1 Score=50.40 Aligned_cols=42 Identities=17% Similarity=0.158 Sum_probs=33.4
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+++-+++.++++++++.|++++++|+ ++........+++|+-
T Consensus 567 Dplr~~v~~aI~~l~~~Gi~v~~~TG---d~~~ta~~ia~~~gi~ 608 (997)
T TIGR01106 567 DPPRAAVPDAVGKCRSAGIKVIMVTG---DHPITAKAIAKGVGII 608 (997)
T ss_pred CCChHHHHHHHHHHHHCCCeEEEECC---CCHHHHHHHHHHcCCC
Confidence 46679999999999999999999999 4555555555567763
No 183
>PF05152 DUF705: Protein of unknown function (DUF705); InterPro: IPR007827 This family contains uncharacterised baculoviral proteins.
Probab=92.14 E-value=0.47 Score=45.02 Aligned_cols=68 Identities=19% Similarity=0.173 Sum_probs=50.0
Q ss_pred hcCCCEEEEecCCceecCCc----cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 92 LNSFDTVLTDCDGVLWLENE----LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 92 ~~~~kaViFDlDGTL~d~~~----~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
......|+||+|.||+.... .-|...+.+..|++.|--+++=|- .+++-+.+.+++++++--.+-+++
T Consensus 119 ~~~phVIVfDlD~TLItd~~~v~Ir~~~v~~sL~~Lk~~g~vLvLWSy---G~~eHV~~sl~~~~L~~~Fd~ii~ 190 (297)
T PF05152_consen 119 WEPPHVIVFDLDSTLITDEGDVRIRDPAVYDSLRELKEQGCVLVLWSY---GNREHVRHSLKELKLEGYFDIIIC 190 (297)
T ss_pred CCCCcEEEEECCCcccccCCccccCChHHHHHHHHHHHcCCEEEEecC---CCHHHHHHHHHHhCCccccEEEEe
Confidence 45568999999999997633 348888999999999976666554 456777888888887633444443
No 184
>TIGR02250 FCP1_euk FCP1-like phosphatase, phosphatase domain. This domain is related to domains found in the human NLI interacting factor-like phosphatases, and together both are detected by the Pfam model pfam03031.
Probab=92.13 E-value=0.25 Score=42.99 Aligned_cols=23 Identities=9% Similarity=0.011 Sum_probs=18.4
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
.||+.++++.+.+. +++.+.|+.
T Consensus 60 rPgv~efL~~l~~~-yel~I~T~~ 82 (156)
T TIGR02250 60 RPFLHEFLKEASKL-YEMHVYTMG 82 (156)
T ss_pred CCCHHHHHHHHHhh-cEEEEEeCC
Confidence 67888888888744 888888883
No 185
>TIGR01523 ATPase-IID_K-Na potassium and/or sodium efflux P-type ATPase, fungal-type. The Leishmania sequence (GP|3192903), which falls between trusted and noise in this model, may very well turn out to be an active potassium pump.
Probab=90.77 E-value=2.3 Score=48.22 Aligned_cols=41 Identities=10% Similarity=0.221 Sum_probs=31.4
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~ 153 (383)
+++-|++.++++.+++.|++++++|+....+...+ -+++|+
T Consensus 645 Dp~r~~v~~aI~~l~~aGIkv~MiTGD~~~tA~~i---A~~~Gi 685 (1053)
T TIGR01523 645 DPPRNESAGAVEKCHQAGINVHMLTGDFPETAKAI---AQEVGI 685 (1053)
T ss_pred cCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHH---HHHcCC
Confidence 46789999999999999999999999544444433 334565
No 186
>PRK11587 putative phosphatase; Provisional
Probab=90.59 E-value=1.9 Score=39.20 Aligned_cols=49 Identities=27% Similarity=0.319 Sum_probs=35.2
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCccc
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEII 161 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~ 161 (383)
...++||+.++|+.|+++|+++.++||++.. .....+...|+.. .+.++
T Consensus 81 ~~~~~pg~~e~L~~L~~~g~~~~ivTn~~~~---~~~~~l~~~~l~~-~~~i~ 129 (218)
T PRK11587 81 GITALPGAIALLNHLNKLGIPWAIVTSGSVP---VASARHKAAGLPA-PEVFV 129 (218)
T ss_pred CceeCcCHHHHHHHHHHcCCcEEEEcCCCch---HHHHHHHhcCCCC-ccEEE
Confidence 3467899999999999999999999996433 3344455667643 23444
No 187
>KOG2630|consensus
Probab=90.55 E-value=0.81 Score=42.09 Aligned_cols=103 Identities=12% Similarity=0.080 Sum_probs=74.2
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccC---cchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPG---TGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNP 314 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~---~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p 314 (383)
..|+++..+++.-+..|+.+.+-|++.... .. ++++ .+.+..++..-.+. ..-.|--...|..+.+.+|.++
T Consensus 123 ~v~aDv~~a~e~w~~~g~~vyIYSSgsv~A--qK-llfg~s~~gdl~~y~~gyfDt--~iG~K~e~~sy~~I~~~Ig~s~ 197 (254)
T KOG2630|consen 123 HVYADVLPAIERWSGEGVRVYIYSSGSVAA--QK-LLFGYSDAGDLRKYISGYFDT--TIGLKVESQSYKKIGHLIGKSP 197 (254)
T ss_pred cccchhHHHHHHHhhcCceEEEEcCCcHHH--HH-HHHcccCcchHHHHhhhhhhc--cccceehhHHHHHHHHHhCCCh
Confidence 568899999999998999876655554432 12 3333 34444444433322 1224667888999999999999
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcC-CCC
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLT-GDT 346 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~-G~~ 346 (383)
.++++.-|- ..-..+|+.+|+.+.++.. |..
T Consensus 198 ~eiLfLTd~-~~Ea~aa~~aGl~a~l~~rPgna 229 (254)
T KOG2630|consen 198 REILFLTDV-PREAAAARKAGLQAGLVSRPGNA 229 (254)
T ss_pred hheEEeccC-hHHHHHHHhcccceeeeecCCCC
Confidence 999999999 7789999999999988744 533
No 188
>KOG2470|consensus
Probab=89.85 E-value=0.95 Score=44.11 Aligned_cols=98 Identities=18% Similarity=0.129 Sum_probs=63.7
Q ss_pred hhHHHHHHHhhCCCCE-EEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCH-----HH------------
Q psy7233 241 PKLMKAACYLTNPNTL-FVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSK-----LI------------ 302 (383)
Q Consensus 241 ~~l~~~l~~L~~~g~~-~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p-----~~------------ 302 (383)
+.+...++.|+++|.+ +++||+...+....-+... ...+.+.|+.+.- ...||+- .+
T Consensus 243 ~ql~~fl~kL~~~GKklFLiTNSPysFVd~GM~flv-G~~WRdlFDVVIv----qA~KP~Fftde~rPfR~~dek~~sl~ 317 (510)
T KOG2470|consen 243 PQLLAFLRKLKDHGKKLFLITNSPYSFVDKGMRFLV-GDDWRDLFDVVIV----QANKPEFFTDERRPFRKYDEKRGSLL 317 (510)
T ss_pred HHHHHHHHHHHHhcCcEEEEeCCchhhhhcCceeee-CccHHhhhheeEE----ecCCCcccccccCcchhhcccccchh
Confidence 4577788899998877 4889988877643332222 2345566665431 2234331 01
Q ss_pred -----------------HHHHHHHcCCCCCcEEEEecCchhhHHHHH-HcCCcEEEEcC
Q psy7233 303 -----------------GSYLIEKYNLNPERTLMIGDRGNTDIRLGY-NNGFQTLLVLT 343 (383)
Q Consensus 303 -----------------~~~al~~lgi~p~e~l~IGDs~~~DI~~A~-~aGl~tv~V~~ 343 (383)
....++.-|..-.+++++||.+.+|+.... .+|++|-.|-.
T Consensus 318 wdkv~klekgkiYy~G~l~~flelt~WrG~~VlYFGDHlySDLad~tlkhgWRTgAII~ 376 (510)
T KOG2470|consen 318 WDKVDKLEKGKIYYQGNLKSFLELTGWRGPRVLYFGDHLYSDLADLTLKHGWRTGAIIP 376 (510)
T ss_pred hhhhhhcccCceeeeccHHHHHHHhccCCCeeEEecCcchhhhhhhHhhcccccccchH
Confidence 123344446677899999999999999988 89988876643
No 189
>COG1778 Low specificity phosphatase (HAD superfamily) [General function prediction only]
Probab=89.36 E-value=0.19 Score=43.41 Aligned_cols=41 Identities=24% Similarity=0.314 Sum_probs=37.2
Q ss_pred CCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEE
Q psy7233 298 PSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTL 339 (383)
Q Consensus 298 P~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv 339 (383)
-+...|+.+++++++.+++|.+|||. .+|+..-+++|+..+
T Consensus 83 dK~~a~~~L~~~~~l~~e~~ayiGDD-~~Dlpvm~~vGls~a 123 (170)
T COG1778 83 DKLAAFEELLKKLNLDPEEVAYVGDD-LVDLPVMEKVGLSVA 123 (170)
T ss_pred hHHHHHHHHHHHhCCCHHHhhhhcCc-cccHHHHHHcCCccc
Confidence 34678999999999999999999999 999999999997654
No 190
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=89.20 E-value=0.78 Score=50.89 Aligned_cols=56 Identities=13% Similarity=0.083 Sum_probs=42.2
Q ss_pred CCEEEEecCCceecCC---------------ccChhHHHHHHHHHHc-CceEEEEcCCCCCCHHHHHHHHHhcCC
Q psy7233 95 FDTVLTDCDGVLWLEN---------------ELISGADQVMNSLKSL-GKKIFYVTNNSTKTREQLIVKLKHLGF 153 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~---------------~~~p~A~eal~~l~~~-Gi~v~ivTn~~~~~~~~~~~~L~~lG~ 153 (383)
-++++||.||||.... .+.|+..++|+.|.+. +..|+++|+ |+.+.+.+.+...++
T Consensus 591 ~RLlfLDyDGTLap~~~~P~~~~~~~~~~~a~p~p~l~~~L~~L~~dp~n~VaIVSG---R~~~~Le~~fg~~~L 662 (934)
T PLN03064 591 NRLLILGFNATLTEPVDTPGRRGDQIKEMELRLHPELKEPLRALCSDPKTTIVVLSG---SDRSVLDENFGEFDM 662 (934)
T ss_pred ceEEEEecCceeccCCCCcccccccccccccCCCHHHHHHHHHHHhCCCCeEEEEeC---CCHHHHHHHhCCCCc
Confidence 4799999999998631 2447788899999886 678999999 677777666654443
No 191
>COG0637 Predicted phosphatase/phosphohexomutase [General function prediction only]
Probab=88.67 E-value=3.1 Score=38.19 Aligned_cols=75 Identities=16% Similarity=0.185 Sum_probs=52.1
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhcCCCCCeEEEEeCcc
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSG 188 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~~~~~~~~~~ig~~~ 188 (383)
+..++||+.++++.|+++|+++..+||+ ++......|..+|+.-..+.++++.+ ..+. +|. ++.
T Consensus 84 ~~~~~pGv~~~l~~L~~~~i~~avaS~s---~~~~~~~~L~~~gl~~~f~~~v~~~d-----v~~~-KP~-------Pd~ 147 (221)
T COG0637 84 GLKPIPGVVELLEQLKARGIPLAVASSS---PRRAAERVLARLGLLDYFDVIVTADD-----VARG-KPA-------PDI 147 (221)
T ss_pred CCCCCccHHHHHHHHHhcCCcEEEecCC---hHHHHHHHHHHccChhhcchhccHHH-----HhcC-CCC-------CHH
Confidence 4578999999999999999999999983 33445556667787655555655433 3333 343 566
Q ss_pred hHHHHHHcCCc
Q psy7233 189 IADELNLAGIE 199 (383)
Q Consensus 189 l~~~l~~~gi~ 199 (383)
+....+.+|+.
T Consensus 148 yL~Aa~~Lgv~ 158 (221)
T COG0637 148 YLLAAERLGVD 158 (221)
T ss_pred HHHHHHHcCCC
Confidence 77778887744
No 192
>TIGR02245 HAD_IIID1 HAD-superfamily subfamily IIID hydrolase, TIGR02245. This family of sequences appears to belong to the Haloacid Dehalogenase (HAD) superfamily of enzymes by virtue of the presence of three catalytic domains, in this case: LLVLD(ILV)D(YH)T, I(VMG)IWS, and (DN)(VC)K(PA)Lx{15-17}T(IL)(MH)(FV)DD(IL)(GRS)(RK)N. Since this family has no large "cap" domain between motifs 1 and 2 or between 2 and 3, it is formally a "class III" HAD.
Probab=88.36 E-value=0.85 Score=41.24 Aligned_cols=42 Identities=12% Similarity=0.047 Sum_probs=33.6
Q ss_pred CCCEEEEecCCceecCC--------ccChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 94 SFDTVLTDCDGVLWLEN--------ELISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~--------~~~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
.-+.+++|+||||++.. -.-|+..++|+.+.+ ...+++-|..
T Consensus 20 ~kklLVLDLDeTLvh~~~~~~~~~~~kRP~l~eFL~~~~~-~feIvVwTAa 69 (195)
T TIGR02245 20 GKKLLVLDIDYTLFDHRSPAETGEELMRPYLHEFLTSAYE-DYDIVIWSAT 69 (195)
T ss_pred CCcEEEEeCCCceEcccccCCCceEEeCCCHHHHHHHHHh-CCEEEEEecC
Confidence 34799999999999863 235889999998887 6888888863
No 193
>TIGR01533 lipo_e_P4 5'-nucleotidase, lipoprotein e(P4) family. which in turn belongs to the haloacid dehalogenase (HAD) superfamily of aspartate-dependent hydrolases. Members are found on the outer membrane of Gram-negative bacteria and the cytoplasmic membrane of Gram-positive bacteria. Most members have classic lipoprotein signal sequences. A critical role of this 5'-nucleotidase in Haemophilus influenzae is the degradation of external riboside in order to allow transport into the cell. An earlier suggested role in hemin transport is no longer current. This enzyme may also have other physiologically significant roles.
Probab=88.30 E-value=0.23 Score=47.13 Aligned_cols=85 Identities=12% Similarity=0.085 Sum_probs=50.5
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCC--CCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMG--PHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNP 314 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~--~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p 314 (383)
..++++.+.+..++++|..+ ++||.+...... ..+...|... ...+.+.-.+ .++|++..+..+.+..++
T Consensus 118 ~~ipGA~e~L~~L~~~G~~v~iVTnR~~~~~~~T~~~Lkk~Gi~~--~~~d~lllr~---~~~~K~~rr~~I~~~y~I-- 190 (266)
T TIGR01533 118 KPVAGALDFLNYANSKGVKIFYVSNRSEKEKAATLKNLKRFGFPQ--ADEEHLLLKK---DKSSKESRRQKVQKDYEI-- 190 (266)
T ss_pred CcCccHHHHHHHHHHCCCeEEEEeCCCcchHHHHHHHHHHcCcCC--CCcceEEeCC---CCCCcHHHHHHHHhcCCE--
Confidence 35788999999998888765 778865432200 0000111110 0011111111 135667778888887776
Q ss_pred CcEEEEecCchhhHHHHH
Q psy7233 315 ERTLMIGDRGNTDIRLGY 332 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~ 332 (383)
+++|||+ ..|+.++.
T Consensus 191 --vl~vGD~-~~Df~~~~ 205 (266)
T TIGR01533 191 --VLLFGDN-LLDFDDFF 205 (266)
T ss_pred --EEEECCC-HHHhhhhh
Confidence 9999999 89997643
No 194
>COG5610 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=87.55 E-value=0.16 Score=50.88 Aligned_cols=49 Identities=22% Similarity=0.212 Sum_probs=44.8
Q ss_pred cccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEE
Q psy7233 293 VVIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLV 341 (383)
Q Consensus 293 ~~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V 341 (383)
....|-+...|..+++.-+++|.+.+++||+...|+.++++.|+.|.+-
T Consensus 153 ~rl~KnSg~LFk~Vlk~EnVd~~~w~H~GDN~~aD~l~pk~LgI~Tlf~ 201 (635)
T COG5610 153 FRLKKNSGNLFKAVLKLENVDPKKWIHCGDNWVADYLKPKNLGISTLFY 201 (635)
T ss_pred eehhcccchHHHHHHhhcCCChhheEEecCchhhhhcCccccchhHHHH
Confidence 3467889999999999999999999999999999999999999988754
No 195
>PF13419 HAD_2: Haloacid dehalogenase-like hydrolase; PDB: 2FI1_A 2I6X_A 3SD7_A 4F71_A 4DFD_B 4F72_B 4DCC_A 3DDH_A 3KZX_A 2B0C_A ....
Probab=87.54 E-value=0.74 Score=39.26 Aligned_cols=53 Identities=26% Similarity=0.424 Sum_probs=41.7
Q ss_pred cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 108 LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 108 d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
...++.|++.++++.+++.|++++++||+ +...+...++.+|+.-..+.++++
T Consensus 74 ~~~~~~~~~~~~L~~l~~~~~~~~i~Sn~---~~~~~~~~l~~~~~~~~f~~i~~~ 126 (176)
T PF13419_consen 74 SKLQPYPGVRELLERLKAKGIPLVIVSNG---SRERIERVLERLGLDDYFDEIISS 126 (176)
T ss_dssp GGEEESTTHHHHHHHHHHTTSEEEEEESS---EHHHHHHHHHHTTHGGGCSEEEEG
T ss_pred hccchhhhhhhhhhhcccccceeEEeecC---Cccccccccccccccccccccccc
Confidence 44578899999999999999999999994 466677778888877444556544
No 196
>TIGR01511 ATPase-IB1_Cu copper-(or silver)-translocating P-type ATPase. One member from Halobacterium is annotated as "molybdenum-binding protein" although no evidence can be found for this classification.
Probab=87.52 E-value=4.2 Score=42.86 Aligned_cols=98 Identities=24% Similarity=0.301 Sum_probs=61.5
Q ss_pred CCCEEEEecCCceec----CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHH--H
Q psy7233 94 SFDTVLTDCDGVLWL----ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYL--A 167 (383)
Q Consensus 94 ~~kaViFDlDGTL~d----~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~--~ 167 (383)
....+.++.||++.- ..++.|++.++++.|++.|+++.++||. +.......++.+|++.. .++. +.+. .
T Consensus 384 g~~~~~~~~~~~~~g~~~~~d~l~~~a~e~i~~Lk~~Gi~v~ilSgd---~~~~a~~ia~~lgi~~~-~~~~-p~~K~~~ 458 (562)
T TIGR01511 384 GSTSVLVAVNGELAGVFALEDQLRPEAKEVIQALKRRGIEPVMLTGD---NRKTAKAVAKELGINVR-AEVL-PDDKAAL 458 (562)
T ss_pred CCEEEEEEECCEEEEEEEecccccHHHHHHHHHHHHcCCeEEEEcCC---CHHHHHHHHHHcCCcEE-ccCC-hHHHHHH
Confidence 356788999998743 4678999999999999999999999994 34444455566888621 1221 1111 1
Q ss_pred HHHHHhcCCCCCeEEEEeCc-chHHHHHHcCCc
Q psy7233 168 AQYLKKHLDPKKKAYIVGSS-GIADELNLAGIE 199 (383)
Q Consensus 168 ~~~l~~~~~~~~~~~~ig~~-~l~~~l~~~gi~ 199 (383)
.+.+.+ .++.+.++|.. .-...++..++.
T Consensus 459 v~~l~~---~~~~v~~VGDg~nD~~al~~A~vg 488 (562)
T TIGR01511 459 IKELQE---KGRVVAMVGDGINDAPALAQADVG 488 (562)
T ss_pred HHHHHH---cCCEEEEEeCCCccHHHHhhCCEE
Confidence 122222 23567777753 334455555543
No 197
>COG4030 Uncharacterized protein conserved in archaea [Function unknown]
Probab=87.47 E-value=9.2 Score=35.37 Aligned_cols=40 Identities=20% Similarity=0.149 Sum_probs=28.9
Q ss_pred HHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCc-EEEE
Q psy7233 300 KLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQ-TLLV 341 (383)
Q Consensus 300 p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~-tv~V 341 (383)
..+++..++.-+++-. +++|||| .+|++|.+.+.-. .+.|
T Consensus 193 a~i~e~~~ele~~d~s-a~~VGDS-ItDv~ml~~~rgrGglAv 233 (315)
T COG4030 193 AKIMEGYCELEGIDFS-AVVVGDS-ITDVKMLEAARGRGGLAV 233 (315)
T ss_pred hHHHHHHHhhcCCCcc-eeEecCc-ccchHHHHHhhccCceEE
Confidence 5566666666665444 9999999 9999999987433 3555
No 198
>KOG2116|consensus
Probab=86.69 E-value=1.2 Score=46.66 Aligned_cols=45 Identities=24% Similarity=0.434 Sum_probs=36.9
Q ss_pred CCCEEEEecCCceecCCcc------------ChhHHHHHHHHHHcCceEEEEcCCCC
Q psy7233 94 SFDTVLTDCDGVLWLENEL------------ISGADQVMNSLKSLGKKIFYVTNNST 138 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~------------~p~A~eal~~l~~~Gi~v~ivTn~~~ 138 (383)
+-+.|+-|+|||++.++.+ ..|..+.+.++.++|++++++|.++-
T Consensus 529 n~kIVISDIDGTITKSDvLGh~lp~iGkDWTh~GVAkLyt~Ik~NGYk~lyLSARaI 585 (738)
T KOG2116|consen 529 NDKIVISDIDGTITKSDVLGHVLPMIGKDWTHTGVAKLYTKIKENGYKILYLSARAI 585 (738)
T ss_pred CCcEEEecCCCceEhhhhhhhhhhhhcCcchhhhHHHHHHHHHhCCeeEEEEehhhh
Confidence 3478999999999986522 46778899999999999999998543
No 199
>TIGR01652 ATPase-Plipid phospholipid-translocating P-type ATPase, flippase. This model describes the P-type ATPase responsible for transporting phospholipids from one leaflet of bilayer membranes to the other. These ATPases are found only in eukaryotes.
Probab=86.66 E-value=4.2 Score=46.20 Aligned_cols=38 Identities=24% Similarity=0.383 Sum_probs=30.1
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHH
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIV 146 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~ 146 (383)
.+++-+++.++++.+++.|++++++||....+...++.
T Consensus 629 eD~lq~~v~etI~~L~~AGIkv~mlTGD~~~TA~~IA~ 666 (1057)
T TIGR01652 629 EDKLQEGVPETIELLRQAGIKIWVLTGDKVETAINIGY 666 (1057)
T ss_pred hhhhhhccHHHHHHHHHCCCeEEEEcCCcHHHHHHHHH
Confidence 35778999999999999999999999965444444443
No 200
>KOG0207|consensus
Probab=86.56 E-value=33 Score=37.90 Aligned_cols=87 Identities=17% Similarity=0.111 Sum_probs=50.4
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCcccc-CCCCHHHHHHHHHHcCCCCCcE
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVI-GKPSKLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-gKP~p~~~~~al~~lgi~p~e~ 317 (383)
-++...+...|++.|+.. ..|+ |..- -+..+....|.+.+.. -+|.- =....+++.-....+
T Consensus 725 r~~a~~av~~Lk~~Gi~v~mLTG-Dn~~-------------aA~svA~~VGi~~V~aev~P~~--K~~~Ik~lq~~~~~V 788 (951)
T KOG0207|consen 725 RPDAALAVAELKSMGIKVVMLTG-DNDA-------------AARSVAQQVGIDNVYAEVLPEQ--KAEKIKEIQKNGGPV 788 (951)
T ss_pred chhHHHHHHHHHhcCceEEEEcC-CCHH-------------HHHHHHHhhCcceEEeccCchh--hHHHHHHHHhcCCcE
Confidence 367888899999999886 4444 3221 1223333334332221 25543 222333443334789
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCC
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDT 346 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~ 346 (383)
.||||. .||-.+...|. |+|.-|.+
T Consensus 789 aMVGDG-INDaPALA~Ad---VGIaig~g 813 (951)
T KOG0207|consen 789 AMVGDG-INDAPALAQAD---VGIAIGAG 813 (951)
T ss_pred EEEeCC-CCccHHHHhhc---cceeeccc
Confidence 999999 99988888776 44444444
No 201
>PLN02423 phosphomannomutase
Probab=86.43 E-value=0.81 Score=42.76 Aligned_cols=30 Identities=13% Similarity=0.076 Sum_probs=27.7
Q ss_pred CCCcEEEEec----CchhhHHHHHHcCCcEEEEcC
Q psy7233 313 NPERTLMIGD----RGNTDIRLGYNNGFQTLLVLT 343 (383)
Q Consensus 313 ~p~e~l~IGD----s~~~DI~~A~~aGl~tv~V~~ 343 (383)
+++++++||| + .||++|.+.-|+.++-|..
T Consensus 199 ~~~e~~aFGD~~~~~-~ND~eMl~~~~~~~~~~~~ 232 (245)
T PLN02423 199 DFDEIHFFGDKTYEG-GNDHEIFESERTIGHTVTS 232 (245)
T ss_pred CcCeEEEEeccCCCC-CCcHHHHhCCCcceEEeCC
Confidence 8999999999 7 9999999999999998754
No 202
>KOG3189|consensus
Probab=86.32 E-value=1.8 Score=39.11 Aligned_cols=52 Identities=23% Similarity=0.266 Sum_probs=37.1
Q ss_pred EEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 97 TVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 97 aViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
.++||+||||... ..+.|...++++.+++. ..+-++-+ .++.+...++|.++
T Consensus 13 l~lfdvdgtLt~~r~~~~~e~~~~l~~lr~~-v~ig~Vgg------sDl~k~~eqlG~~V 65 (252)
T KOG3189|consen 13 LCLFDVDGTLTPPRQKVTPEMLEFLQKLRKK-VTIGFVGG------SDLSKQQEQLGDNV 65 (252)
T ss_pred EEEEecCCccccccccCCHHHHHHHHHHhhh-eEEEEeec------HHHHHHHHHhchhH
Confidence 7899999999875 67789999999997765 44445544 35555555666553
No 203
>PLN02645 phosphoglycolate phosphatase
Probab=85.71 E-value=5 Score=38.86 Aligned_cols=90 Identities=11% Similarity=0.019 Sum_probs=54.3
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCC--ccccCCCCHHHHHHHHHHcCCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQRE--PVVIGKPSKLIGSYLIEKYNLNP 314 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~--~~~~gKP~p~~~~~al~~lgi~p 314 (383)
..+++..++++.|+++|.++ ++||....... .+.+.+.. .|.. ....- -+.......++..+...
T Consensus 44 ~~~~ga~e~l~~lr~~g~~~~~~TN~~~~~~~----------~~~~~l~~-lGi~~~~~~I~-ts~~~~~~~l~~~~~~~ 111 (311)
T PLN02645 44 KLIEGVPETLDMLRSMGKKLVFVTNNSTKSRA----------QYGKKFES-LGLNVTEEEIF-SSSFAAAAYLKSINFPK 111 (311)
T ss_pred ccCcCHHHHHHHHHHCCCEEEEEeCCCCCCHH----------HHHHHHHH-CCCCCChhhEe-ehHHHHHHHHHhhccCC
Confidence 45788999999999989886 77886543221 11222221 1111 00011 11234455566666655
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEE
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLL 340 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~ 340 (383)
.+.++|+++ ..+.+.++++|+.++.
T Consensus 112 ~~~V~viG~-~~~~~~l~~~Gi~~~~ 136 (311)
T PLN02645 112 DKKVYVIGE-EGILEELELAGFQYLG 136 (311)
T ss_pred CCEEEEEcC-HHHHHHHHHCCCEEec
Confidence 556788888 7899999999998654
No 204
>TIGR01525 ATPase-IB_hvy heavy metal translocating P-type ATPase. This alignment encompasses two equivalog models for the copper and cadmium-type heavy metal transporting P-type ATPases (TIGR01511 and TIGR01512) as well as those species which score ambiguously between both models. For more comments and references, see the files on TIGR01511 and 01512.
Probab=85.64 E-value=6.3 Score=41.45 Aligned_cols=101 Identities=21% Similarity=0.248 Sum_probs=63.6
Q ss_pred CCCEEEEecCCceec----CCccChhHHHHHHHHHHcC-ceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHH
Q psy7233 94 SFDTVLTDCDGVLWL----ENELISGADQVMNSLKSLG-KKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAA 168 (383)
Q Consensus 94 ~~kaViFDlDGTL~d----~~~~~p~A~eal~~l~~~G-i~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~ 168 (383)
.++.+.+..||++.. ..++.|++.+.++.|+++| +++.++|| .+.......++++|++....++. +.+. .
T Consensus 363 g~~~~~v~~~~~~~g~i~~~d~~~~g~~e~l~~L~~~g~i~v~ivTg---d~~~~a~~i~~~lgi~~~f~~~~-p~~K-~ 437 (556)
T TIGR01525 363 GKTVVFVAVDGELLGVIALRDQLRPEAKEAIAALKRAGGIKLVMLTG---DNRSAAEAVAAELGIDEVHAELL-PEDK-L 437 (556)
T ss_pred CcEEEEEEECCEEEEEEEecccchHhHHHHHHHHHHcCCCeEEEEeC---CCHHHHHHHHHHhCCCeeeccCC-HHHH-H
Confidence 467788999998654 4688999999999999999 99999999 44455556666788864333332 2211 1
Q ss_pred HHHHhcCCCCCeEEEEeCc-chHHHHHHcCCc
Q psy7233 169 QYLKKHLDPKKKAYIVGSS-GIADELNLAGIE 199 (383)
Q Consensus 169 ~~l~~~~~~~~~~~~ig~~-~l~~~l~~~gi~ 199 (383)
+.+.+.-..+..+.++|.. .-...++..|+-
T Consensus 438 ~~v~~l~~~~~~v~~vGDg~nD~~al~~A~vg 469 (556)
T TIGR01525 438 AIVKELQEEGGVVAMVGDGINDAPALAAADVG 469 (556)
T ss_pred HHHHHHHHcCCEEEEEECChhHHHHHhhCCEe
Confidence 2222210123467777763 223345555543
No 205
>PLN02770 haloacid dehalogenase-like hydrolase family protein
Probab=85.50 E-value=1.5 Score=40.96 Aligned_cols=51 Identities=22% Similarity=0.187 Sum_probs=39.3
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
..++||+.+.|+.|+++|+++.++|| .+...+...++.+|+.-..+.++++
T Consensus 107 ~~l~pgv~e~L~~L~~~g~~l~I~Tn---~~~~~~~~~l~~~gl~~~Fd~iv~~ 157 (248)
T PLN02770 107 LKPLNGLYKLKKWIEDRGLKRAAVTN---APRENAELMISLLGLSDFFQAVIIG 157 (248)
T ss_pred CCcCccHHHHHHHHHHcCCeEEEEeC---CCHHHHHHHHHHcCChhhCcEEEec
Confidence 46789999999999999999999999 4455666677778876444555544
No 206
>PLN03190 aminophospholipid translocase; Provisional
Probab=85.33 E-value=12 Score=42.95 Aligned_cols=40 Identities=23% Similarity=0.424 Sum_probs=31.6
Q ss_pred cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHH
Q psy7233 108 LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVK 147 (383)
Q Consensus 108 d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~ 147 (383)
-.+++-+++.++++.+++.|+++.++||....+...++..
T Consensus 723 ~~D~lr~~v~~~I~~l~~agi~v~mlTGD~~~tAi~IA~s 762 (1178)
T PLN03190 723 IEDKLQQGVPEAIESLRTAGIKVWVLTGDKQETAISIGYS 762 (1178)
T ss_pred EecCCchhHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
Confidence 3467889999999999999999999999655554444443
No 207
>TIGR03351 PhnX-like phosphonatase-like hydrolase. This clade of sequences are the closest homologs to the PhnX enzyme, phosphonoacetaldehyde (Pald) hydrolase (phosphonatase, TIGR01422). This phosphonatase-like enzyme and PhnX itself are members of the haloacid dehalogenase (HAD) superfamily (pfam00702) having a a number of distinctive features that set them apart from typical HAD enzymes. The typical HAD N-terminal motif DxDx(T/V) here is DxAGT and the usual conserved lysine prior to the C-terminal motif is instead an arginine. Also distinctive of phosphonatase, and particular to its bi-catalytic mechanism is a conserved lysine in the variable "cap" domain. This lysine forms a Schiff base with the aldehyde of phosphonoacetaldehyde, providing, through the resulting positive charge, a polarization of the C-P bond necesary for cleavage as well as a route to the initial product of cleavage, an ene-amine. The conservation of these elements in this phosphonatase-like enzyme suggests that the
Probab=85.09 E-value=1.5 Score=39.63 Aligned_cols=50 Identities=24% Similarity=0.400 Sum_probs=36.7
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC--CCcCcccch
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN--AEPNEIIGT 163 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~--i~~~~i~~s 163 (383)
+++||+.++++.++++|+++.++||. ..+.....|+.+|+. -..+.++++
T Consensus 87 ~l~~G~~~~L~~L~~~g~~~~ivT~~---~~~~~~~~l~~~~l~~~~~f~~i~~~ 138 (220)
T TIGR03351 87 VALPGAEEAFRSLRSSGIKVALTTGF---DRDTAERLLEKLGWTVGDDVDAVVCP 138 (220)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCC---chHHHHHHHHHhhhhhhccCCEEEcC
Confidence 68899999999999999999999994 344555566666765 223445544
No 208
>TIGR02253 CTE7 HAD superfamily (subfamily IA) hydrolase, TIGR02253. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549).
Probab=85.04 E-value=1.2 Score=40.26 Aligned_cols=50 Identities=18% Similarity=0.239 Sum_probs=36.8
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
..++|++.++|+.|++.|+++.++||+. .......++.+|+.-..+.+++
T Consensus 93 ~~~~~g~~~~L~~L~~~g~~~~i~Tn~~---~~~~~~~l~~~~l~~~f~~i~~ 142 (221)
T TIGR02253 93 LRVYPGVRDTLMELRESGYRLGIITDGL---PVKQWEKLERLGVRDFFDAVIT 142 (221)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEeCCc---hHHHHHHHHhCChHHhccEEEE
Confidence 3678999999999999999999999953 3344556777777533344443
No 209
>PRK13288 pyrophosphatase PpaX; Provisional
Probab=84.64 E-value=1.7 Score=39.31 Aligned_cols=49 Identities=22% Similarity=0.253 Sum_probs=37.6
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
.++||+.++++.|+++|+++.++||+ ....+...++.+|+.--.+.+++
T Consensus 82 ~~~~g~~~~l~~L~~~g~~~~i~S~~---~~~~~~~~l~~~gl~~~f~~i~~ 130 (214)
T PRK13288 82 TEYETVYETLKTLKKQGYKLGIVTTK---MRDTVEMGLKLTGLDEFFDVVIT 130 (214)
T ss_pred ccCcCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCChhceeEEEe
Confidence 57899999999999999999999994 35566667777887643344443
No 210
>PF00702 Hydrolase: haloacid dehalogenase-like hydrolase; InterPro: IPR005834 This group of hydrolase enzymes is structurally different from the alpha/beta hydrolase family (abhydrolase). This group includes L-2-haloacid dehalogenase, epoxide hydrolases and phosphatases. The structure consists of two domains. One is an inserted four helix bundle, which is the least well conserved region of the alignment, between residues 16 and 96 of HAD1_PSESP. The rest of the fold is composed of the core alpha/beta domain.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 1TE2_A 3NAL_A 3NAM_A 3NAN_A 3A1D_B 3J09_A 3J08_A 2B8E_C 3A1E_A 2VOY_J ....
Probab=84.35 E-value=2.5 Score=37.63 Aligned_cols=43 Identities=26% Similarity=0.359 Sum_probs=34.9
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..++.|++.++++.|++.|+++.++|| .+........+.+|+.
T Consensus 125 ~d~~~~~~~~~l~~L~~~Gi~~~i~TG---D~~~~a~~~~~~lgi~ 167 (215)
T PF00702_consen 125 RDPLRPGAKEALQELKEAGIKVAILTG---DNESTASAIAKQLGIF 167 (215)
T ss_dssp EEEBHTTHHHHHHHHHHTTEEEEEEES---SEHHHHHHHHHHTTSC
T ss_pred cCcchhhhhhhhhhhhccCcceeeeec---cccccccccccccccc
Confidence 457889999999999999999999998 3455555556678884
No 211
>TIGR01454 AHBA_synth_RP 3-amino-5-hydroxybenoic acid synthesis related protein. The most closely related enzyme below the noise cutoff is IndB which is involved in the biosynthesis of Indigoidine in Pectobacterium (Erwinia) chrysanthemi, a gamma proteobacter. This enzyme is similarly related to PGP. In this case, too it is unclear what role would be be played by a PGPase activity.
Probab=84.30 E-value=1.6 Score=39.13 Aligned_cols=49 Identities=18% Similarity=0.252 Sum_probs=36.7
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCccc
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEII 161 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~ 161 (383)
..++|++.+.++.|+++|+++.++||. +...+...+..+|+.-..+.++
T Consensus 74 ~~~~~g~~~~L~~L~~~g~~~~i~Sn~---~~~~~~~~l~~~~l~~~f~~i~ 122 (205)
T TIGR01454 74 VEVFPGVPELLAELRADGVGTAIATGK---SGPRARSLLEALGLLPLFDHVI 122 (205)
T ss_pred cccCCCHHHHHHHHHHCCCeEEEEeCC---chHHHHHHHHHcCChhheeeEE
Confidence 477899999999999999999999994 3444555677777753333444
No 212
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=84.13 E-value=12 Score=40.42 Aligned_cols=110 Identities=14% Similarity=0.065 Sum_probs=62.0
Q ss_pred hhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCcccc-CCCC-HHHHHHHHHHcCCCCCcE
Q psy7233 240 FPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVI-GKPS-KLIGSYLIEKYNLNPERT 317 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~-gKP~-p~~~~~al~~lgi~p~e~ 317 (383)
=+++.+.++.+++.|++.+.-..|.... +..+..-.|.+.+.. -+|. ...+...++.. ...+
T Consensus 448 Rp~a~eaI~~l~~~Gi~v~miTGD~~~t-------------a~~iA~~lGI~~v~a~~~PedK~~~v~~lq~~---g~~V 511 (675)
T TIGR01497 448 KGGIKERFAQLRKMGIKTIMITGDNRLT-------------AAAIAAEAGVDDFIAEATPEDKIALIRQEQAE---GKLV 511 (675)
T ss_pred hhHHHHHHHHHHHCCCEEEEEcCCCHHH-------------HHHHHHHcCCCEEEcCCCHHHHHHHHHHHHHc---CCeE
Confidence 4789999999999999864433343222 222222333332221 2332 11122223332 3579
Q ss_pred EEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
.|+||+ .||..+.++|+ +.|..|.+..-. .+ .+|+++ +++..+.++++
T Consensus 512 amvGDG-~NDapAL~~Ad---vGiAm~~gt~~a-ke------------aadivLldd~~s~Iv~av~ 561 (675)
T TIGR01497 512 AMTGDG-TNDAPALAQAD---VGVAMNSGTQAA-KE------------AANMVDLDSDPTKLIEVVH 561 (675)
T ss_pred EEECCC-cchHHHHHhCC---EeEEeCCCCHHH-HH------------hCCEEECCCCHHHHHHHHH
Confidence 999999 99999999999 555455333222 21 346654 55777766553
No 213
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=84.02 E-value=7.1 Score=37.90 Aligned_cols=90 Identities=23% Similarity=0.366 Sum_probs=58.5
Q ss_pred CEEEEecCCceecCC-------------------ccChhHHHHHHHHHHcC-ceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 96 DTVLTDCDGVLWLEN-------------------ELISGADQVMNSLKSLG-KKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 96 kaViFDlDGTL~d~~-------------------~~~p~A~eal~~l~~~G-i~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
-++|-|+|.|+..+. +++||...+.+.+.+.| .+++++||.+-..-..+.+.+..-+++.
T Consensus 162 igiISDiDDTV~~T~V~~~~r~~~~s~~l~~~tr~~ipGV~~~yr~l~~~~~apvfYvSnSPw~~f~~L~efi~~~~~P~ 241 (373)
T COG4850 162 IGIISDIDDTVKVTGVTEGPRKAGRSLLLHALTRQVIPGVSAWYRALTNLGDAPVFYVSNSPWQLFPTLQEFITNRNFPY 241 (373)
T ss_pred eeeeeccccceEecccccchHHHHHHhhhcccccCCCCCHHHHHHHHHhcCCCCeEEecCChhHhHHHHHHHHhcCCCCC
Confidence 378999999987642 35899999999999998 9999999955444445555554455552
Q ss_pred ------Cc----CcccchHHH-----HHHHHHhcCCCCCeEEEEeCc
Q psy7233 156 ------EP----NEIIGTAYL-----AAQYLKKHLDPKKKAYIVGSS 187 (383)
Q Consensus 156 ------~~----~~i~~s~~~-----~~~~l~~~~~~~~~~~~ig~~ 187 (383)
.+ +.+..++.. ....+.+ .++.+..++|..
T Consensus 242 GPl~L~~~g~~~~~i~~sga~rK~~~l~nil~~--~p~~kfvLVGDs 286 (373)
T COG4850 242 GPLLLRRWGGVLDNIIESGAARKGQSLRNILRR--YPDRKFVLVGDS 286 (373)
T ss_pred CchhHhhcCCcccccccchhhhcccHHHHHHHh--CCCceEEEecCC
Confidence 12 333333321 2223444 467777777764
No 214
>KOG2961|consensus
Probab=83.63 E-value=4 Score=35.28 Aligned_cols=62 Identities=18% Similarity=0.212 Sum_probs=44.2
Q ss_pred CCCEEEEecCCceec--CCccChhHHHHHHHHHHc-C-ceEEEEcCCCCCC----HHHHHHHHHh-cCCCC
Q psy7233 94 SFDTVLTDCDGVLWL--ENELISGADQVMNSLKSL-G-KKIFYVTNNSTKT----REQLIVKLKH-LGFNA 155 (383)
Q Consensus 94 ~~kaViFDlDGTL~d--~~~~~p~A~eal~~l~~~-G-i~v~ivTn~~~~~----~~~~~~~L~~-lG~~i 155 (383)
.+|+|+||-|.++.- +..+||.-..-++.++.. | +.+.+++|..+-+ ....++.|++ .|+++
T Consensus 42 ~ikavVlDKDNcit~P~~~~Iwp~~l~~ie~~~~vygek~i~v~SNsaG~~~~D~d~s~Ak~le~k~gIpV 112 (190)
T KOG2961|consen 42 GIKAVVLDKDNCITAPYSLAIWPPLLPSIERCKAVYGEKDIAVFSNSAGLTEYDHDDSKAKALEAKIGIPV 112 (190)
T ss_pred CceEEEEcCCCeeeCCcccccCchhHHHHHHHHHHhCcccEEEEecCcCccccCCchHHHHHHHHhhCCce
Confidence 799999999999874 467788888888888764 3 6788899865441 2234555553 66664
No 215
>PF06189 5-nucleotidase: 5'-nucleotidase; InterPro: IPR010394 This family consists of both eukaryotic and prokaryotic 5'-nucleotidase sequences (3.1.3.5 from EC).; GO: 0000166 nucleotide binding, 0000287 magnesium ion binding, 0008253 5'-nucleotidase activity, 0009117 nucleotide metabolic process, 0005737 cytoplasm
Probab=83.27 E-value=2.9 Score=39.33 Aligned_cols=61 Identities=20% Similarity=0.294 Sum_probs=44.0
Q ss_pred EEEEecCCceecC--Ccc-------------------------ChhHHHHHHHHHHc------CceEEEEcCCCCCCHHH
Q psy7233 97 TVLTDCDGVLWLE--NEL-------------------------ISGADQVMNSLKSL------GKKIFYVTNNSTKTREQ 143 (383)
Q Consensus 97 aViFDlDGTL~d~--~~~-------------------------~p~A~eal~~l~~~------Gi~v~ivTn~~~~~~~~ 143 (383)
-|.||-||||.+. +.+ +-.--..|.++++. -+.+.+||.++..+.+.
T Consensus 123 RIAFDgDaVLfsDesE~vy~~~GL~~F~~~E~~~a~~Pl~~GP~~~fl~~L~~lQ~~~~~~~~piRtalVTAR~apah~R 202 (264)
T PF06189_consen 123 RIAFDGDAVLFSDESERVYQEQGLEAFHEHEKENADKPLPEGPFKDFLKKLSKLQKKFPPENSPIRTALVTARSAPAHER 202 (264)
T ss_pred EEEEcCCeEeecCcchHhHHhccHHHHHHHHHHhccCCCcCCCHHHHHHHHHHHHHhcCCCCCceEEEEEEcCCCchhHH
Confidence 5899999999874 222 11122344455543 36789999999999999
Q ss_pred HHHHHHhcCCCCCc
Q psy7233 144 LIVKLKHLGFNAEP 157 (383)
Q Consensus 144 ~~~~L~~lG~~i~~ 157 (383)
+.+.|+.+|+.+++
T Consensus 203 vI~TLr~Wgv~vDE 216 (264)
T PF06189_consen 203 VIRTLRSWGVRVDE 216 (264)
T ss_pred HHHHHHHcCCcHhH
Confidence 99999999998763
No 216
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=83.02 E-value=16 Score=39.33 Aligned_cols=112 Identities=14% Similarity=0.033 Sum_probs=66.1
Q ss_pred hhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEE
Q psy7233 240 FPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLM 319 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~ 319 (383)
=+++.+.+..+++.|++.+.-..|.... +..+..-.|.+.+..+ =.|+-=..+.+.+.-.-+-+.|
T Consensus 443 R~~a~e~I~~Lr~~GI~vvMiTGDn~~T-------------A~aIA~elGI~~v~A~-~~PedK~~iV~~lQ~~G~~VaM 508 (673)
T PRK14010 443 KDGLVERFRELREMGIETVMCTGDNELT-------------AATIAKEAGVDRFVAE-CKPEDKINVIREEQAKGHIVAM 508 (673)
T ss_pred cHHHHHHHHHHHHCCCeEEEECCCCHHH-------------HHHHHHHcCCceEEcC-CCHHHHHHHHHHHHhCCCEEEE
Confidence 3789999999999999864433343222 2233333333322211 1233223333333322366999
Q ss_pred EecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 320 IGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 320 IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
+||. .||-.+-++|. |.|..|.++. .++- -+|.++ +++..+.+.++
T Consensus 509 tGDG-vNDAPALa~AD---VGIAMgsGTd--vAke-----------AADiVLldd~ls~Iv~av~ 556 (673)
T PRK14010 509 TGDG-TNDAPALAEAN---VGLAMNSGTM--SAKE-----------AANLIDLDSNPTKLMEVVL 556 (673)
T ss_pred ECCC-hhhHHHHHhCC---EEEEeCCCCH--HHHH-----------hCCEEEcCCCHHHHHHHHH
Confidence 9999 99999999999 6776664432 2221 457766 67887777654
No 217
>PRK14988 GMP/IMP nucleotidase; Provisional
Probab=82.43 E-value=1.8 Score=39.70 Aligned_cols=51 Identities=29% Similarity=0.432 Sum_probs=37.5
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
..++||+.+.++.|+++|+++.++||+ +.......+..+|+.-..+.++++
T Consensus 92 ~~~~~g~~e~L~~Lk~~g~~~~i~Tn~---~~~~~~~~l~~~~l~~~fd~iv~s 142 (224)
T PRK14988 92 AVLREDTVPFLEALKASGKRRILLTNA---HPHNLAVKLEHTGLDAHLDLLLST 142 (224)
T ss_pred CCcCCCHHHHHHHHHhCCCeEEEEeCc---CHHHHHHHHHHCCcHHHCCEEEEe
Confidence 467899999999999999999999994 344555566667765333445443
No 218
>PLN03243 haloacid dehalogenase-like hydrolase; Provisional
Probab=82.32 E-value=2.1 Score=40.46 Aligned_cols=50 Identities=16% Similarity=0.236 Sum_probs=37.3
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
.++||+.++|+.|++.|+++.++||. +...+...+..+|+.-..+.++++
T Consensus 109 ~l~pg~~e~L~~L~~~g~~l~I~Tn~---~~~~~~~~l~~~gl~~~Fd~ii~~ 158 (260)
T PLN03243 109 RLRPGSREFVQALKKHEIPIAVASTR---PRRYLERAIEAVGMEGFFSVVLAA 158 (260)
T ss_pred ccCCCHHHHHHHHHHCCCEEEEEeCc---CHHHHHHHHHHcCCHhhCcEEEec
Confidence 56899999999999999999999994 344555566667765434455543
No 219
>PRK10826 2-deoxyglucose-6-phosphatase; Provisional
Probab=82.22 E-value=2.4 Score=38.57 Aligned_cols=51 Identities=16% Similarity=0.187 Sum_probs=37.9
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
..++|++.+.++.++++|++++++||.. ...+...++.+|+.-..+.++++
T Consensus 91 ~~~~~g~~~~l~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~~~f~~~~~~ 141 (222)
T PRK10826 91 RPLLPGVREALALCKAQGLKIGLASASP---LHMLEAVLTMFDLRDYFDALASA 141 (222)
T ss_pred CCCCCCHHHHHHHHHHCCCeEEEEeCCc---HHHHHHHHHhCcchhcccEEEEc
Confidence 5678999999999999999999999944 34455556667766444555543
No 220
>TIGR01449 PGP_bact 2-phosphoglycolate phosphatase, prokaryotic. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolase enzymes (pfam00702).
Probab=81.87 E-value=2.5 Score=37.88 Aligned_cols=49 Identities=20% Similarity=0.295 Sum_probs=36.2
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCccc
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEII 161 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~ 161 (383)
..++|++.++++.++++|+++.++||. +.......++.+|+.-..+.++
T Consensus 84 ~~~~~g~~~~L~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~~~f~~~~ 132 (213)
T TIGR01449 84 TSVFPGVEATLGALRAKGLRLGLVTNK---PTPLARPLLELLGLAKYFSVLI 132 (213)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCcHhhCcEEE
Confidence 467899999999999999999999994 3445556666777653333343
No 221
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=81.56 E-value=2.4 Score=43.16 Aligned_cols=52 Identities=21% Similarity=0.326 Sum_probs=38.1
Q ss_pred CCCEEEEecCCceecCC-----------------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHH
Q psy7233 94 SFDTVLTDCDGVLWLEN-----------------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLI 145 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~-----------------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~ 145 (383)
.-|++++|+|+|||-|- ..+-.-++.+..++++|+-..++|-|.-+...++.
T Consensus 221 ~kK~LVLDLDNTLWGGVIGedGv~GI~Ls~~~~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da~evF 289 (574)
T COG3882 221 SKKALVLDLDNTLWGGVIGEDGVDGIRLSNSAEGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDAKEVF 289 (574)
T ss_pred ccceEEEecCCcccccccccccccceeecCCCCchhHHHHHHHHHHHHhccEEEEEecCCchhhHHHHH
Confidence 46999999999999752 12333456788899999999998886655544443
No 222
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.48 E-value=1.3 Score=39.28 Aligned_cols=29 Identities=21% Similarity=0.387 Sum_probs=25.8
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCCCC
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTGDT 346 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~ 346 (383)
-++-||| .+||.+|++||++.|.+.....
T Consensus 187 ~IhYGDS-D~Di~AAkeaG~RgIRilRAaN 215 (237)
T COG3700 187 RIHYGDS-DNDITAAKEAGARGIRILRAAN 215 (237)
T ss_pred eEEecCC-chhhhHHHhcCccceeEEecCC
Confidence 5899999 9999999999999999976533
No 223
>COG4087 Soluble P-type ATPase [General function prediction only]
Probab=81.44 E-value=8.9 Score=32.39 Aligned_cols=56 Identities=13% Similarity=0.223 Sum_probs=43.1
Q ss_pred CEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 96 DTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 96 kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
+...-|+++|+..+..+++...+.++.|... +.++++|+...-+ +.+.+.-.|++.
T Consensus 15 d~~~~~v~~tiatgGklf~ev~e~iqeL~d~-V~i~IASgDr~gs---l~~lae~~gi~~ 70 (152)
T COG4087 15 DSKAGKVLYTIATGGKLFSEVSETIQELHDM-VDIYIASGDRKGS---LVQLAEFVGIPV 70 (152)
T ss_pred eeecceEEEEEccCcEEcHhhHHHHHHHHHh-heEEEecCCcchH---HHHHHHHcCCce
Confidence 4556678999999999999999999999999 9999999854333 333333477664
No 224
>COG3700 AphA Acid phosphatase (class B) [General function prediction only]
Probab=81.34 E-value=2.8 Score=37.14 Aligned_cols=56 Identities=20% Similarity=0.284 Sum_probs=42.0
Q ss_pred CCEEEEecCCceecCCc--------c-------------------------C--hhHHHHHHHHHHcCceEEEEcCCCCC
Q psy7233 95 FDTVLTDCDGVLWLENE--------L-------------------------I--SGADQVMNSLKSLGKKIFYVTNNSTK 139 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~--------~-------------------------~--p~A~eal~~l~~~Gi~v~ivTn~~~~ 139 (383)
.=+|-||+|.|++-+.+ . + +-|.+.+.+..++|-.++++|+++..
T Consensus 63 Pi~VsFDIDDTvLFsSp~F~~Gk~~~sPgs~DyLknq~FW~~vn~g~D~~SIPKevA~qLI~MHq~RGD~i~FvTGRt~g 142 (237)
T COG3700 63 PIAVSFDIDDTVLFSSPGFWRGKKYFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRGDAIYFVTGRTPG 142 (237)
T ss_pred CeeEeeccCCeeEecccccccCccccCCChHHhhcCHHHHHHHhcCCccccchHHHHHHHHHHHHhcCCeEEEEecCCCC
Confidence 45899999999865321 1 2 33667888888999999999998877
Q ss_pred CHHHHHHHHHh
Q psy7233 140 TREQLIVKLKH 150 (383)
Q Consensus 140 ~~~~~~~~L~~ 150 (383)
-.+.+.+.|.+
T Consensus 143 k~d~vsk~Lak 153 (237)
T COG3700 143 KTDTVSKTLAK 153 (237)
T ss_pred cccccchhHHh
Confidence 77777777654
No 225
>TIGR02252 DREG-2 REG-2-like, HAD superfamily (subfamily IA) hydrolase. Most likely, these sequences, like the vast majority of HAD sequences, represent phosphatase enzymes.
Probab=81.30 E-value=2 Score=38.35 Aligned_cols=49 Identities=16% Similarity=0.198 Sum_probs=36.2
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
.++|++.++|+.|++.|+++.++||.. . .....++.+|+.-..+.++.+
T Consensus 105 ~~~~g~~~~l~~L~~~g~~~~i~Sn~~-~---~~~~~l~~~~l~~~fd~i~~s 153 (203)
T TIGR02252 105 QVYPDAIKLLKDLRERGLILGVISNFD-S---RLRGLLEALGLLEYFDFVVTS 153 (203)
T ss_pred eeCcCHHHHHHHHHHCCCEEEEEeCCc-h---hHHHHHHHCCcHHhcceEEee
Confidence 578999999999999999999999943 2 234567777775444555543
No 226
>TIGR01422 phosphonatase phosphonoacetaldehyde hydrolase. This enzyme is a member of the Haloacid Dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases (pfam00702), and contains a modified version of the conserved catalytic motifs of that superfamily: the first motif is usually DxDx(T/V), here it is DxAxT, and in the third motif the normal conserved lysine is instead an arginine. Additionally, the enzyme contains a unique conserved catalytic lysine (B. cereus pos. 53) which is involved in the binding and activation of the substrate through the formation of a Schiff base. The substrate of this enzyme is the product of 2-aminoethylphosphonate (AEP) transaminase, phosphonoacetaldehyde. This degradation pathway for AEP may be related to its toxic properties which are utilized by microorganisms as a chemical warfare agent.
Probab=80.54 E-value=2.9 Score=38.87 Aligned_cols=43 Identities=28% Similarity=0.247 Sum_probs=32.9
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
...++||+.++|+.|+++|+++.++||. +...+...++.+|+.
T Consensus 97 ~~~~~pg~~e~L~~L~~~g~~l~IvT~~---~~~~~~~~l~~~gl~ 139 (253)
T TIGR01422 97 YSSPIPGVIEVIAYLRARGIKIGSTTGY---TREMMDVVAPEAALQ 139 (253)
T ss_pred cCccCCCHHHHHHHHHHCCCeEEEECCC---cHHHHHHHHHHHHhc
Confidence 3467899999999999999999999994 444445555555554
No 227
>KOG2134|consensus
Probab=79.74 E-value=1.4 Score=43.53 Aligned_cols=48 Identities=23% Similarity=0.308 Sum_probs=39.2
Q ss_pred cCCCEEEEecCCceecCCc-------------cChhHHHHHHHHHHcCceEEEEcCCCCCC
Q psy7233 93 NSFDTVLTDCDGVLWLENE-------------LISGADQVMNSLKSLGKKIFYVTNNSTKT 140 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~~~-------------~~p~A~eal~~l~~~Gi~v~ivTn~~~~~ 140 (383)
...+-+.||+||||++... +.+....=+..+.+.|+..++.||.....
T Consensus 73 ~~~K~i~FD~dgtlI~t~sg~vf~~~~~dw~~l~~~vp~Klktl~~~g~~l~iftnq~~i~ 133 (422)
T KOG2134|consen 73 GGSKIIMFDYDGTLIDTKSGKVFPKGSMDWRILFPEVPSKLKTLYQDGIKLFIFTNQNGIA 133 (422)
T ss_pred CCcceEEEecCCceeecCCcceeeccCccceeeccccchhhhhhccCCeEEEEEecccccc
Confidence 3578999999999998643 35777778999999999999999966543
No 228
>COG0546 Gph Predicted phosphatases [General function prediction only]
Probab=79.64 E-value=3.7 Score=37.45 Aligned_cols=48 Identities=38% Similarity=0.522 Sum_probs=37.4
Q ss_pred cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 112 LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 112 ~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
++|++.+++..+++.|++..++|| ++...+...|+.+|+..-.+.+++
T Consensus 90 ~~~gv~e~L~~L~~~g~~l~i~T~---k~~~~~~~~l~~~gl~~~F~~i~g 137 (220)
T COG0546 90 LFPGVKELLAALKSAGYKLGIVTN---KPERELDILLKALGLADYFDVIVG 137 (220)
T ss_pred cCCCHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHhCCccccceEEc
Confidence 589999999999999999999999 455556666667787755555554
No 229
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=79.56 E-value=12 Score=41.94 Aligned_cols=135 Identities=12% Similarity=0.049 Sum_probs=70.6
Q ss_pred EEEEecc--CCCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcc----------hHH----HHHHHhcCC-C
Q psy7233 229 AVVVGFD--SHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTG----------SMV----AAVKTGAQR-E 291 (383)
Q Consensus 229 ~Vv~g~~--~~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~----------~l~----~~~~~~~~~-~ 291 (383)
-.++|.- ....-+++.+++..+++.|++++.-..|........-...|.. .+. ..+...... .
T Consensus 568 l~~lGli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~~~GI~~~~~~vi~G~~~~~l~~~el~~~i~~~~ 647 (941)
T TIGR01517 568 LTLIGVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIARNCGILTFGGLAMEGKEFRRLVYEEMDPILPKLR 647 (941)
T ss_pred cEEEEEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHHHcCCCCCCceEeeHHHhhhCCHHHHHHHhccCe
Confidence 3556532 2233578999999999999987544445432210000001110 000 001111110 1
Q ss_pred ccccCCCC-HHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEE
Q psy7233 292 PVVIGKPS-KLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYY 370 (383)
Q Consensus 292 ~~~~gKP~-p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~v 370 (383)
-...-.|. ..-+-.++++.| +-+.|+||. .||..+-++|. |+|..|....+-..+ -+|++
T Consensus 648 Vfar~sPe~K~~iV~~lq~~g---~vVam~GDG-vNDapALk~Ad---VGIAmg~~gtdvAk~------------aADiv 708 (941)
T TIGR01517 648 VLARSSPLDKQLLVLMLKDMG---EVVAVTGDG-TNDAPALKLAD---VGFSMGISGTEVAKE------------ASDII 708 (941)
T ss_pred EEEECCHHHHHHHHHHHHHCC---CEEEEECCC-CchHHHHHhCC---cceecCCCccHHHHH------------hCCEE
Confidence 01122332 112333444444 579999999 99999999998 666666222222222 46888
Q ss_pred eC--CHhhHHHhhh
Q psy7233 371 LS--SLGDMLPFLS 382 (383)
Q Consensus 371 i~--sl~eL~~~l~ 382 (383)
+. ++..+..++.
T Consensus 709 L~dd~f~~I~~~i~ 722 (941)
T TIGR01517 709 LLDDNFASIVRAVK 722 (941)
T ss_pred EecCCHHHHHHHHH
Confidence 86 7888877653
No 230
>TIGR01657 P-ATPase-V P-type ATPase of unknown pump specificity (type V). These P-type ATPases form a distinct clade but the substrate of their pumping activity has yet to be determined. This clade has been designated type V in.
Probab=79.22 E-value=20 Score=40.94 Aligned_cols=48 Identities=21% Similarity=0.348 Sum_probs=35.2
Q ss_pred CceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 104 GVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 104 GTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
|-+.-.+++-|++.++++.+++.|++++++|+....+...+ -++.|+-
T Consensus 649 Gli~~~d~lr~~~~~~I~~l~~agi~v~miTGD~~~TA~~i---A~~~gii 696 (1054)
T TIGR01657 649 GFIVFENPLKPDTKEVIKELKRASIRTVMITGDNPLTAVHV---ARECGIV 696 (1054)
T ss_pred EEEEEecCCCccHHHHHHHHHHCCCeEEEECCCCHHHHHHH---HHHcCCC
Confidence 33333457789999999999999999999999655544444 4456763
No 231
>TIGR01491 HAD-SF-IB-PSPlk HAD-superfamily, subfamily-IB PSPase-like hydrolase, archaeal. This hypothetical equivalog is a member of the IB subfamily (TIGR01488) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. The sequences modelled by this alignment are all from archaeal species. The phylogenetically closest group of sequences to these are phosphoserine phosphatases (TIGR00338). There are no known archaeal phosphoserine phosphatases, and no archaea fall within TIGR00338. It is likely, then, that This model represents the archaeal branch of the PSPase equivalog.
Probab=78.49 E-value=3.5 Score=36.39 Aligned_cols=42 Identities=19% Similarity=0.053 Sum_probs=32.3
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..++|++.++++.++++|++++++||.. ..-+...++.+|+.
T Consensus 79 ~~~~~g~~e~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~~g~~ 120 (201)
T TIGR01491 79 ISLRDYAEELVRWLKEKGLKTAIVSGGI---MCLAKKVAEKLNPD 120 (201)
T ss_pred CCCCccHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHHHhCCC
Confidence 3678999999999999999999999943 33344445567764
No 232
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=78.35 E-value=26 Score=37.89 Aligned_cols=112 Identities=15% Similarity=0.092 Sum_probs=65.6
Q ss_pred hhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHcCCCCCcEEE
Q psy7233 240 FPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLNPERTLM 319 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~p~e~l~ 319 (383)
=+++.+.+..|++.|++.+.-..|.... +..+..-.|.+.+. .-=.|+-=....+.+.-.-+-+.|
T Consensus 447 R~~~~eai~~Lr~~GI~vvMiTGDn~~T-------------A~aIA~elGId~v~-A~~~PedK~~iV~~lQ~~G~~VaM 512 (679)
T PRK01122 447 KPGIKERFAELRKMGIKTVMITGDNPLT-------------AAAIAAEAGVDDFL-AEATPEDKLALIRQEQAEGRLVAM 512 (679)
T ss_pred chhHHHHHHHHHHCCCeEEEECCCCHHH-------------HHHHHHHcCCcEEE-ccCCHHHHHHHHHHHHHcCCeEEE
Confidence 3789999999999999864433444222 23333334433221 112233222333333222356999
Q ss_pred EecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 320 IGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 320 IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
+||. .||-.+.++|. |.|..|.++. .++ .-+|.++ +++..+.+.++
T Consensus 513 tGDG-vNDAPALa~AD---VGIAMgsGTd--vAk-----------eAADiVLldd~~s~Iv~av~ 560 (679)
T PRK01122 513 TGDG-TNDAPALAQAD---VGVAMNSGTQ--AAK-----------EAGNMVDLDSNPTKLIEVVE 560 (679)
T ss_pred ECCC-cchHHHHHhCC---EeEEeCCCCH--HHH-----------HhCCEEEeCCCHHHHHHHHH
Confidence 9999 99999999998 6666664432 222 1356665 46777776653
No 233
>TIGR01672 AphA HAD superfamily (subfamily IIIB) phosphatase, TIGR01672. Supporting evidence for the inclusion in the HAD superfamily, whose phosphatase members are magnesium dependent, is the inhibition by EDTA and calcium ions, and stimulation by magnesium ion.
Probab=77.80 E-value=4.3 Score=37.88 Aligned_cols=71 Identities=20% Similarity=0.241 Sum_probs=49.4
Q ss_pred hhhHHHhhc-CCC-EEEEecCCceecCCcc---------------------------------C--hhHHHHHHHHHHcC
Q psy7233 85 GDKQKDFLN-SFD-TVLTDCDGVLWLENEL---------------------------------I--SGADQVMNSLKSLG 127 (383)
Q Consensus 85 ~~~~~~~~~-~~k-aViFDlDGTL~d~~~~---------------------------------~--p~A~eal~~l~~~G 127 (383)
.+.+++-++ +.. +|+||+||||+|+... . +++.++++.++++|
T Consensus 51 ~~~~~~~~~~~~p~aViFDlDgTLlDSs~~~~~G~~~~s~~~~~~l~g~~~w~~~~~~~~~~s~p~~~a~elL~~l~~~G 130 (237)
T TIGR01672 51 VAQIENSLEGRPPIAVSFDIDDTVLFSSPGFWRGKKTFSPGSEDYLKNQVFWEKVNNGWDEFSIPKEVARQLIDMHQRRG 130 (237)
T ss_pred HHHHHHhcCCCCCeEEEEeCCCccccCcHHHhCCcccCCHHHhhhhcChHHHHHHHHhcccCCcchhHHHHHHHHHHHCC
Confidence 444443333 333 9999999999997541 2 23889999999999
Q ss_pred ceEEEEcCCCCCCHHHHHHHHH-hcCCCC
Q psy7233 128 KKIFYVTNNSTKTREQLIVKLK-HLGFNA 155 (383)
Q Consensus 128 i~v~ivTn~~~~~~~~~~~~L~-~lG~~i 155 (383)
++++++||+.....+...+.+. .+|++.
T Consensus 131 ~~i~iVTnr~~~k~~~~a~~ll~~lGi~~ 159 (237)
T TIGR01672 131 DAIFFVTGRTPGKTDTVSKTLAKNFHIPA 159 (237)
T ss_pred CEEEEEeCCCCCcCHHHHHHHHHHhCCch
Confidence 9999999965432444555544 588864
No 234
>TIGR01548 HAD-SF-IA-hyp1 haloacid dehalogenase superfamily, subfamily IA hydrolase, TIGR01548. All but the Halobacterium sequence currently found are annotated as "Imidazoleglycerol-phosphate dehydratase", however, the source of the annotation could not be traced and significant homology could not be found between any of these sequences and known IGPD's.
Probab=77.75 E-value=4.2 Score=36.18 Aligned_cols=49 Identities=18% Similarity=0.123 Sum_probs=36.4
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
.+.+++.+.|+.|++.|+++.++|| .+...+...|+.+|+.-..+.+++
T Consensus 106 ~~~~~~~~~L~~l~~~g~~~~i~T~---~~~~~~~~~l~~~gl~~~f~~~~~ 154 (197)
T TIGR01548 106 ETLLTPKGLLRELHRAPKGMAVVTG---RPRKDAAKFLTTHGLEILFPVQIW 154 (197)
T ss_pred ccccCHHHHHHHHHHcCCcEEEECC---CCHHHHHHHHHHcCchhhCCEEEe
Confidence 4556679999999999999999999 455566667777887644444443
No 235
>TIGR01509 HAD-SF-IA-v3 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED. HAD subfamilies caused by an overly broad single model.
Probab=77.36 E-value=3.8 Score=35.50 Aligned_cols=49 Identities=22% Similarity=0.381 Sum_probs=33.5
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
.++.|++.++++.+++.|+++.++||+.... ...+.++|+.-..+.++.
T Consensus 84 ~~~~~g~~~~l~~l~~~g~~~~i~Tn~~~~~----~~~~~~~~l~~~f~~i~~ 132 (183)
T TIGR01509 84 LKPLPGVEPLLEALRARGKKLALLTNSPRDH----AVLVQELGLRDLFDVVIF 132 (183)
T ss_pred CccCcCHHHHHHHHHHCCCeEEEEeCCchHH----HHHHHhcCCHHHCCEEEE
Confidence 3678999999999999999999999954332 222333666433344443
No 236
>PRK13222 phosphoglycolate phosphatase; Provisional
Probab=77.16 E-value=5.4 Score=35.95 Aligned_cols=42 Identities=26% Similarity=0.382 Sum_probs=33.4
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..++||+.++++.+++.|++++++||. ........++.+|+.
T Consensus 92 ~~~~~g~~~~l~~l~~~g~~~~i~S~~---~~~~~~~~l~~~~l~ 133 (226)
T PRK13222 92 SRLYPGVKETLAALKAAGYPLAVVTNK---PTPFVAPLLEALGIA 133 (226)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCc
Confidence 467899999999999999999999994 334445666667765
No 237
>TIGR02009 PGMB-YQAB-SF beta-phosphoglucomutase family hydrolase. All of these are members of the larger Haloacid dehalogenase (HAD) subfamily IA and include the "variant 3" glu-asp version of the third conserved HAD domain (TIGR01509).
Probab=77.04 E-value=3.3 Score=36.08 Aligned_cols=48 Identities=19% Similarity=0.286 Sum_probs=35.6
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
..++||+.++|+.|++.|+++.++||+ ......++.+|+.-..+.++.
T Consensus 87 ~~~~~g~~~~l~~l~~~g~~i~i~S~~-----~~~~~~l~~~~l~~~f~~v~~ 134 (185)
T TIGR02009 87 AEVLPGIENFLKRLKKKGIAVGLGSSS-----KNADRILAKLGLTDYFDAIVD 134 (185)
T ss_pred CCCCcCHHHHHHHHHHcCCeEEEEeCc-----hhHHHHHHHcChHHHCCEeee
Confidence 467899999999999999999999984 334455666776533344443
No 238
>TIGR01512 ATPase-IB2_Cd heavy metal-(Cd/Co/Hg/Pb/Zn)-translocating P-type ATPase. .
Probab=77.00 E-value=11 Score=39.50 Aligned_cols=99 Identities=21% Similarity=0.232 Sum_probs=60.4
Q ss_pred CCEEEEecCCceec----CCccChhHHHHHHHHHHcCc-eEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchH-HHHH
Q psy7233 95 FDTVLTDCDGVLWL----ENELISGADQVMNSLKSLGK-KIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTA-YLAA 168 (383)
Q Consensus 95 ~kaViFDlDGTL~d----~~~~~p~A~eal~~l~~~Gi-~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~-~~~~ 168 (383)
...+.+-.||++.. ..++.|++.++++.|++.|+ ++.++|| .+.......++++|++-...++.... ....
T Consensus 342 ~~~~~v~~~~~~~g~i~~~d~l~~~~~e~i~~L~~~Gi~~v~vvTg---d~~~~a~~i~~~lgi~~~f~~~~p~~K~~~i 418 (536)
T TIGR01512 342 KTIVHVARDGTYLGYILLSDEPRPDAAEAIAELKALGIEKVVMLTG---DRRAVAERVARELGIDEVHAELLPEDKLEIV 418 (536)
T ss_pred CeEEEEEECCEEEEEEEEeccchHHHHHHHHHHHHcCCCcEEEEcC---CCHHHHHHHHHHcCChhhhhccCcHHHHHHH
Confidence 34566677776533 46788999999999999999 9999999 44455556666788863222222111 1122
Q ss_pred HHHHhcCCCCCeEEEEeCc-chHHHHHHcCCc
Q psy7233 169 QYLKKHLDPKKKAYIVGSS-GIADELNLAGIE 199 (383)
Q Consensus 169 ~~l~~~~~~~~~~~~ig~~-~l~~~l~~~gi~ 199 (383)
+.+.. ....+.++|.. .-...++..++-
T Consensus 419 ~~l~~---~~~~v~~vGDg~nD~~al~~A~vg 447 (536)
T TIGR01512 419 KELRE---KYGPVAMVGDGINDAPALAAADVG 447 (536)
T ss_pred HHHHh---cCCEEEEEeCCHHHHHHHHhCCEE
Confidence 22322 23567777754 334455555543
No 239
>PLN02575 haloacid dehalogenase-like hydrolase
Probab=76.71 E-value=3.5 Score=41.23 Aligned_cols=47 Identities=17% Similarity=0.272 Sum_probs=36.1
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccc
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIG 162 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~ 162 (383)
+||+.++|+.|+++|+++.++|| .+...+...++.+|+.-..+.+++
T Consensus 218 ~pGa~ElL~~Lk~~GiklaIaSn---~~~~~~~~~L~~lgL~~yFd~Iv~ 264 (381)
T PLN02575 218 RTGSQEFVNVLMNYKIPMALVST---RPRKTLENAIGSIGIRGFFSVIVA 264 (381)
T ss_pred CcCHHHHHHHHHHCCCeEEEEeC---CCHHHHHHHHHHcCCHHHceEEEe
Confidence 68999999999999999999999 455666667777887543444544
No 240
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=75.72 E-value=21 Score=39.83 Aligned_cols=59 Identities=15% Similarity=0.028 Sum_probs=39.3
Q ss_pred HHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhh
Q psy7233 304 SYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFL 381 (383)
Q Consensus 304 ~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l 381 (383)
-.++++.| +.+.|+||+ .||..+.++|. |.|..|.++ +.++. -+|.++ +++..+.+.+
T Consensus 595 V~~lq~~G---~vVam~GDG-vNDapALk~Ad---VGIAmg~gt--dvAk~-----------aADiVLldd~~~~I~~ai 654 (867)
T TIGR01524 595 IGLLKKAG---HTVGFLGDG-INDAPALRKAD---VGISVDTAA--DIAKE-----------ASDIILLEKSLMVLEEGV 654 (867)
T ss_pred HHHHHhCC---CEEEEECCC-cccHHHHHhCC---EEEEeCCcc--HHHHH-----------hCCEEEecCChHHHHHHH
Confidence 33444444 579999999 99999999999 556555332 33321 467766 6677776655
Q ss_pred h
Q psy7233 382 S 382 (383)
Q Consensus 382 ~ 382 (383)
+
T Consensus 655 ~ 655 (867)
T TIGR01524 655 I 655 (867)
T ss_pred H
Confidence 3
No 241
>PLN02954 phosphoserine phosphatase
Probab=75.40 E-value=5.8 Score=35.88 Aligned_cols=41 Identities=20% Similarity=0.398 Sum_probs=31.8
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.|++.++++.++++|+++.++|+.. ...+...++.+|++
T Consensus 84 ~l~pg~~e~l~~l~~~g~~~~IvS~~~---~~~i~~~l~~~gi~ 124 (224)
T PLN02954 84 RLSPGIPELVKKLRARGTDVYLVSGGF---RQMIAPVAAILGIP 124 (224)
T ss_pred CCCccHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHhCCC
Confidence 467999999999999999999999943 33444456667774
No 242
>PF01740 STAS: STAS domain; InterPro: IPR002645 The STAS (Sulphate Transporter and AntiSigma factor antagonist) domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function. The establishment of differential gene expression in sporulating Bacillus subtilis involves four protein components one of which is SpoIIAA (P10727 from SWISSPROT). The four components regulate the sporulation sigma factor F. Early in sporulation, SpoIIAA is in the phosphorylated state (SpoIIAA-P), as a result of the activity of the ATP-dependent protein kinase SpoIIAB (P10728 from SWISSPROT). The site at which this protein is a conserved serine. SpoIIAB is an anti-sigma factor that in its free form inhibits F by binding to it. Competition by SpoIIAA (the anti-anti-sigma factor) for binding to SpoIIAB releases Sigma F activity []. The STAS domain is found in the anti-sigma factor antagonist SpoIIAA.; PDB: 3T6O_B 3LKL_B 1H4Z_A 1H4Y_B 1H4X_B 3NY7_A 3OIZ_A 1T6R_A 1VC1_B 1SBO_A ....
Probab=75.17 E-value=7.3 Score=31.37 Aligned_cols=55 Identities=18% Similarity=0.313 Sum_probs=42.4
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
++.|++|+.|+=.-....+..-.+..+.++++|+++.++.- ...+.+.|...|+.
T Consensus 48 ~~~vIlD~s~v~~iDssgi~~L~~~~~~~~~~g~~~~l~~~-----~~~v~~~l~~~~~~ 102 (117)
T PF01740_consen 48 IKNVILDMSGVSFIDSSGIQALVDIIKELRRRGVQLVLVGL-----NPDVRRILERSGLI 102 (117)
T ss_dssp SSEEEEEETTESEESHHHHHHHHHHHHHHHHTTCEEEEESH-----HHHHHHHHHHTTGH
T ss_pred ceEEEEEEEeCCcCCHHHHHHHHHHHHHHHHCCCEEEEEEC-----CHHHHHHHHHcCCC
Confidence 68999999998554445556666778888899999888663 56778888888875
No 243
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=74.70 E-value=21 Score=39.99 Aligned_cols=133 Identities=15% Similarity=0.053 Sum_probs=69.7
Q ss_pred EEEEecc--CCCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcc-------hHH-----HHHHHhcCCCccc
Q psy7233 229 AVVVGFD--SHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTG-------SMV-----AAVKTGAQREPVV 294 (383)
Q Consensus 229 ~Vv~g~~--~~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~-------~l~-----~~~~~~~~~~~~~ 294 (383)
..++|+- ....-+++.++++.+++.|++++.-..|........-...|.. .-. +.+....... ..
T Consensus 539 l~~lGli~l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA~~lGI~~~~vi~G~el~~~~~~el~~~v~~~-~V 617 (903)
T PRK15122 539 LVIRGFLTFLDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKICREVGLEPGEPLLGTEIEAMDDAALAREVEER-TV 617 (903)
T ss_pred cEEEEEEeccCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHHHHcCCCCCCccchHhhhhCCHHHHHHHhhhC-CE
Confidence 3556632 2233578999999999999987443344432110000011110 000 0011111110 11
Q ss_pred cCCCCHHH---HHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe
Q psy7233 295 IGKPSKLI---GSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL 371 (383)
Q Consensus 295 ~gKP~p~~---~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi 371 (383)
+..=.|+- +-.++++.| +-+.|+||. .||..+.++|. |.|..|.++ +.++. -+|.++
T Consensus 618 fAr~sPe~K~~iV~~Lq~~G---~vVamtGDG-vNDaPALk~AD---VGIAmg~gt--dvAke-----------aADiVL 677 (903)
T PRK15122 618 FAKLTPLQKSRVLKALQANG---HTVGFLGDG-INDAPALRDAD---VGISVDSGA--DIAKE-----------SADIIL 677 (903)
T ss_pred EEEeCHHHHHHHHHHHHhCC---CEEEEECCC-chhHHHHHhCC---EEEEeCccc--HHHHH-----------hcCEEE
Confidence 12222322 333334433 679999999 99999999999 556556332 33321 568877
Q ss_pred --CCHhhHHHhhh
Q psy7233 372 --SSLGDMLPFLS 382 (383)
Q Consensus 372 --~sl~eL~~~l~ 382 (383)
+++..+.+.++
T Consensus 678 ldd~f~~Iv~ai~ 690 (903)
T PRK15122 678 LEKSLMVLEEGVI 690 (903)
T ss_pred ecCChHHHHHHHH
Confidence 67888877654
No 244
>PRK13225 phosphoglycolate phosphatase; Provisional
Probab=74.55 E-value=5.3 Score=38.01 Aligned_cols=39 Identities=18% Similarity=0.336 Sum_probs=31.3
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+|++.++++.|++.|+++.++||. +...+...++.+|+.
T Consensus 144 ~pg~~e~L~~L~~~gi~laIvSn~---~~~~~~~~L~~~gl~ 182 (273)
T PRK13225 144 FPGVADLLAQLRSRSLCLGILSSN---SRQNIEAFLQRQGLR 182 (273)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHcCCh
Confidence 789999999999999999999994 445555667777765
No 245
>PF12710 HAD: haloacid dehalogenase-like hydrolase; PDB: 3P96_A 3N28_A 3FVV_A 1RKU_A 1RKV_A 1Y8A_A 2FEA_B 3KD3_B.
Probab=74.26 E-value=3.6 Score=36.00 Aligned_cols=13 Identities=38% Similarity=0.465 Sum_probs=11.8
Q ss_pred EEEecCCceecCC
Q psy7233 98 VLTDCDGVLWLEN 110 (383)
Q Consensus 98 ViFDlDGTL~d~~ 110 (383)
++||+||||+.+.
T Consensus 1 v~fD~DGTL~~~~ 13 (192)
T PF12710_consen 1 VIFDFDGTLTDSD 13 (192)
T ss_dssp EEEESBTTTBSSH
T ss_pred eEEecCcCeecCC
Confidence 6899999999876
No 246
>COG5083 SMP2 Uncharacterized protein involved in plasmid maintenance [General function prediction only]
Probab=73.51 E-value=8.4 Score=38.86 Aligned_cols=45 Identities=27% Similarity=0.401 Sum_probs=33.5
Q ss_pred CCCEEEEecCCceecCCcc------------ChhHHHHHHHHHHcCceEEEEcCCCC
Q psy7233 94 SFDTVLTDCDGVLWLENEL------------ISGADQVMNSLKSLGKKIFYVTNNST 138 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~------------~p~A~eal~~l~~~Gi~v~ivTn~~~ 138 (383)
.-+.|++|+||||+.++-. ..|.........++|+.+.++|.++-
T Consensus 374 n~kiVVsDiDGTITkSD~~Ghv~~miGkdwth~gVAkLYtdI~rNGYkI~YltsR~~ 430 (580)
T COG5083 374 NKKIVVSDIDGTITKSDALGHVKQMIGKDWTHNGVAKLYTDIDRNGYKIKYLTSRSY 430 (580)
T ss_pred CCcEEEEecCCcEEehhhHHHHHHHhccchhhcchhhhhhhhccCceEEEEEecccc
Confidence 4689999999999986422 34455566667778999999998553
No 247
>PRK13226 phosphoglycolate phosphatase; Provisional
Probab=73.24 E-value=6.5 Score=36.03 Aligned_cols=42 Identities=24% Similarity=0.340 Sum_probs=32.6
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..++|++.+.++.|++.|+++.++||++ .......+..+|+.
T Consensus 94 ~~~~pg~~~~L~~L~~~g~~l~i~Tn~~---~~~~~~~l~~~~l~ 135 (229)
T PRK13226 94 SQLFDGVEGMLQRLECAGCVWGIVTNKP---EYLARLILPQLGWE 135 (229)
T ss_pred CeeCCCHHHHHHHHHHCCCeEEEECCCC---HHHHHHHHHHcCch
Confidence 3578999999999999999999999953 33444456667764
No 248
>KOG4549|consensus
Probab=72.52 E-value=13 Score=31.07 Aligned_cols=57 Identities=14% Similarity=0.087 Sum_probs=39.2
Q ss_pred CEEEEecCCceecCC----------ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 96 DTVLTDCDGVLWLEN----------ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 96 kaViFDlDGTL~d~~----------~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+.|-+|+|++++... ..++.+...|..|+.+|+..+++++. .+++-..+.|..+.+.
T Consensus 19 ~~vdthl~~pfkP~k~~~g~~g~e~~fY~Di~rIL~dLk~~GVtl~~ASRt--~ap~iA~q~L~~fkvk 85 (144)
T KOG4549|consen 19 RLVDTHLDYPFKPFKCECGSKGEEMIFYDDIRRILVDLKKLGVTLIHASRT--MAPQIASQGLETFKVK 85 (144)
T ss_pred EEEEecccccccccccCcccCcceeeeccchhHHHHHHHhcCcEEEEecCC--CCHHHHHHHHHHhccC
Confidence 455666666666531 24788999999999999999999973 3444445556556554
No 249
>TIGR00338 serB phosphoserine phosphatase SerB. Phosphoserine phosphatase catalyzes the reaction 3-phospho-serine + H2O = L-serine + phosphate. It catalyzes the last of three steps in the biosynthesis of serine from D-3-phosphoglycerate. Note that this enzyme acts on free phosphoserine, not on phosphoserine residues of phosphoproteins.
Probab=71.99 E-value=8.1 Score=34.79 Aligned_cols=41 Identities=22% Similarity=0.310 Sum_probs=31.6
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.|++.++++.++++|++++++||.. .......++.+|+.
T Consensus 85 ~~~~g~~~~l~~l~~~g~~~~IvS~~~---~~~~~~~l~~~~i~ 125 (219)
T TIGR00338 85 PLTEGAEELVKTLKEKGYKVAVISGGF---DLFAEHVKDKLGLD 125 (219)
T ss_pred CcCCCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCC
Confidence 468999999999999999999999943 33344455567765
No 250
>TIGR02247 HAD-1A3-hyp Epoxide hydrolase N-terminal domain-like phosphatase. These appear to be members of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases by general homology and the conservation of all of the recognized catalytic motifs (although the first motif is unusual in the replacement of the more common aspartate with glycine...). The variable domain is found in between motifs 1 and 2, indicating membership in subfamily I and phylogeny and prediction of the alpha helical nature of the variable domain (by PSI-PRED) indicate membership in subfamily IA.
Probab=71.74 E-value=4.3 Score=36.42 Aligned_cols=30 Identities=23% Similarity=0.274 Sum_probs=26.3
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTK 139 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~ 139 (383)
..++|++.++++.|+++|+++.++||+...
T Consensus 93 ~~~~~~~~~~L~~L~~~g~~l~i~Sn~~~~ 122 (211)
T TIGR02247 93 TKLRPSMMAAIKTLRAKGFKTACITNNFPT 122 (211)
T ss_pred cccChhHHHHHHHHHHCCCeEEEEeCCCCc
Confidence 457899999999999999999999996544
No 251
>PRK13478 phosphonoacetaldehyde hydrolase; Provisional
Probab=71.00 E-value=7.2 Score=36.61 Aligned_cols=40 Identities=25% Similarity=0.233 Sum_probs=29.9
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLG 152 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG 152 (383)
..++||+.+.|+.|+++|+++.++||.+. ..+...++.+|
T Consensus 100 ~~~~pg~~elL~~L~~~g~~l~I~T~~~~---~~~~~~l~~~~ 139 (267)
T PRK13478 100 ATPIPGVLEVIAALRARGIKIGSTTGYTR---EMMDVVVPLAA 139 (267)
T ss_pred CCCCCCHHHHHHHHHHCCCEEEEEcCCcH---HHHHHHHHHHh
Confidence 36789999999999999999999999443 33334444443
No 252
>PRK09449 dUMP phosphatase; Provisional
Probab=70.97 E-value=5 Score=36.31 Aligned_cols=50 Identities=22% Similarity=0.241 Sum_probs=35.2
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
..++|++.++++.|+ .|+++.++||.. .......+..+|+.-..+.++++
T Consensus 94 ~~~~~g~~~~L~~L~-~~~~~~i~Tn~~---~~~~~~~l~~~~l~~~fd~v~~~ 143 (224)
T PRK09449 94 CTPLPGAVELLNALR-GKVKMGIITNGF---TELQQVRLERTGLRDYFDLLVIS 143 (224)
T ss_pred CccCccHHHHHHHHH-hCCeEEEEeCCc---HHHHHHHHHhCChHHHcCEEEEE
Confidence 357899999999999 579999999943 34445557777765333444433
No 253
>KOG0203|consensus
Probab=70.64 E-value=26 Score=38.40 Aligned_cols=36 Identities=17% Similarity=0.207 Sum_probs=27.3
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHH
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIV 146 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~ 146 (383)
++-...+++..+.++.|++++.+|+.-+.+...+++
T Consensus 590 PPR~~vP~Av~~CrsAGIkvimVTgdhpiTAkAiA~ 625 (1019)
T KOG0203|consen 590 PPRAAVPDAVGKCRSAGIKVIMVTGDHPITAKAIAK 625 (1019)
T ss_pred CCcccCchhhhhhhhhCceEEEEecCccchhhhhhh
Confidence 445566788899999999999999976666554443
No 254
>PRK11033 zntA zinc/cadmium/mercury/lead-transporting ATPase; Provisional
Probab=70.11 E-value=19 Score=39.40 Aligned_cols=98 Identities=19% Similarity=0.206 Sum_probs=60.0
Q ss_pred CCCEEEEecCCcee----cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHH
Q psy7233 94 SFDTVLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQ 169 (383)
Q Consensus 94 ~~kaViFDlDGTL~----d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~ 169 (383)
..+.+.+=.||++. -.+++.|++.++++.|++.|+++.++||. +........+++|++...+ ..+.+. .+
T Consensus 547 g~~~v~va~~~~~~g~i~l~d~~r~~a~~~i~~L~~~gi~~~llTGd---~~~~a~~ia~~lgi~~~~~--~~p~~K-~~ 620 (741)
T PRK11033 547 GKTVVLVLRNDDVLGLIALQDTLRADARQAISELKALGIKGVMLTGD---NPRAAAAIAGELGIDFRAG--LLPEDK-VK 620 (741)
T ss_pred CCEEEEEEECCEEEEEEEEecCCchhHHHHHHHHHHCCCEEEEEcCC---CHHHHHHHHHHcCCCeecC--CCHHHH-HH
Confidence 35677777788754 34788999999999999999999999994 4444455556688863222 112221 22
Q ss_pred HHHhcCCCCCeEEEEeCc-chHHHHHHcCC
Q psy7233 170 YLKKHLDPKKKAYIVGSS-GIADELNLAGI 198 (383)
Q Consensus 170 ~l~~~~~~~~~~~~ig~~-~l~~~l~~~gi 198 (383)
.+.+. ..+..+.++|.. .-...++..++
T Consensus 621 ~v~~l-~~~~~v~mvGDgiNDapAl~~A~v 649 (741)
T PRK11033 621 AVTEL-NQHAPLAMVGDGINDAPAMKAASI 649 (741)
T ss_pred HHHHH-hcCCCEEEEECCHHhHHHHHhCCe
Confidence 33322 223467777743 12234454443
No 255
>TIGR01489 DKMTPPase-SF 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. Note that SP|P53981 from S. cerevisiae, a member of this family, is annotated as a "probable membrane protein" due to a predicted transmembrane helix. The region in question contains the second of the three conserved HAD superfamily catalytic motifs and thus, considering the fold of the HAD catalytic domain, is unlikely to be a transmembrane region in fact.
Probab=69.65 E-value=8.4 Score=33.47 Aligned_cols=42 Identities=12% Similarity=0.174 Sum_probs=32.1
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.++.|++.+.++.+++.|+++.++||.. ...+...+..+|+.
T Consensus 71 ~~l~~g~~~ll~~l~~~g~~~~i~S~~~---~~~~~~~l~~~~l~ 112 (188)
T TIGR01489 71 APIDPGFKEFIAFIKEHGIDFIVISDGN---DFFIDPVLEGIGEK 112 (188)
T ss_pred CCCCccHHHHHHHHHHcCCcEEEEeCCc---HHHHHHHHHHcCCh
Confidence 4678999999999999999999999943 33444455556654
No 256
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=69.61 E-value=38 Score=37.16 Aligned_cols=51 Identities=20% Similarity=0.113 Sum_probs=34.1
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
+-+.|+||. .||..+.++|. |.|.-|.++ +.++. -+|.++ +++..+.+.++
T Consensus 535 ~~VamvGDG-vNDapAL~~Ad---VGIAm~~gt--dvAke-----------aADivLl~d~l~~I~~ai~ 587 (755)
T TIGR01647 535 HLVGMTGDG-VNDAPALKKAD---VGIAVAGAT--DAARS-----------AADIVLTEPGLSVIVDAIL 587 (755)
T ss_pred CEEEEEcCC-cccHHHHHhCC---eeEEecCCc--HHHHH-----------hCCEEEEcCChHHHHHHHH
Confidence 679999999 99999999998 444444332 33321 456655 56766666543
No 257
>PRK13223 phosphoglycolate phosphatase; Provisional
Probab=69.24 E-value=7.6 Score=36.75 Aligned_cols=42 Identities=17% Similarity=0.275 Sum_probs=32.5
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..++|++.++++.+++.|++++++||.+ ...+...+..+|+.
T Consensus 100 ~~~~~g~~e~L~~Lk~~g~~l~ivTn~~---~~~~~~~l~~~~i~ 141 (272)
T PRK13223 100 TVVYPGVRDTLKWLKKQGVEMALITNKP---ERFVAPLLDQMKIG 141 (272)
T ss_pred CccCCCHHHHHHHHHHCCCeEEEEECCc---HHHHHHHHHHcCcH
Confidence 3578999999999999999999999943 33444556666664
No 258
>TIGR01990 bPGM beta-phosphoglucomutase. The enzyme from L. lactis has been extensively characterized including a remarkable crystal structure which traps the pentacoordinate transition state.
Probab=68.73 E-value=8.2 Score=33.53 Aligned_cols=48 Identities=19% Similarity=0.319 Sum_probs=34.8
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
.++|++.++|+.|++.|+++.++||.. .. ...++.+|+.-..+.++++
T Consensus 87 ~~~pg~~~~L~~L~~~g~~~~i~s~~~--~~---~~~l~~~~l~~~f~~~~~~ 134 (185)
T TIGR01990 87 DVLPGIKNLLDDLKKNNIKIALASASK--NA---PTVLEKLGLIDYFDAIVDP 134 (185)
T ss_pred ccCccHHHHHHHHHHCCCeEEEEeCCc--cH---HHHHHhcCcHhhCcEEEeh
Confidence 578999999999999999999999842 22 2356677776444555543
No 259
>COG0474 MgtA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=68.63 E-value=31 Score=38.71 Aligned_cols=35 Identities=14% Similarity=0.327 Sum_probs=28.2
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHH
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQL 144 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~ 144 (383)
+++-+++.++++.+++.|+++.++|+.-..+...+
T Consensus 546 Dppr~~v~~aI~~l~~AGI~v~MiTGD~~~TA~aI 580 (917)
T COG0474 546 DPPREDVKEAIEELREAGIKVWMITGDHVETAIAI 580 (917)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEECCCCHHHHHHH
Confidence 57789999999999999999999999544433333
No 260
>PRK06698 bifunctional 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase/phosphatase; Validated
Probab=67.83 E-value=7.8 Score=39.63 Aligned_cols=46 Identities=13% Similarity=0.158 Sum_probs=34.1
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCccc
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEII 161 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~ 161 (383)
+||+.+.|+.|+++|+++.++|| .+.....+.++.+|+.-..+.++
T Consensus 332 ~pG~~e~L~~Lk~~g~~l~IvS~---~~~~~~~~~l~~~~l~~~f~~i~ 377 (459)
T PRK06698 332 YPNVKEIFTYIKENNCSIYIASN---GLTEYLRAIVSYYDLDQWVTETF 377 (459)
T ss_pred CCCHHHHHHHHHHCCCeEEEEeC---CchHHHHHHHHHCCcHhhcceeE
Confidence 68899999999999999999999 34455566677777653333343
No 261
>PRK09552 mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase; Reviewed
Probab=67.71 E-value=6.1 Score=35.90 Aligned_cols=28 Identities=14% Similarity=0.229 Sum_probs=25.4
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
..+.||+.++++.++++|+++.++||..
T Consensus 73 ~~l~pG~~e~l~~l~~~g~~~~IvS~~~ 100 (219)
T PRK09552 73 AEIREGFHEFVQFVKENNIPFYVVSGGM 100 (219)
T ss_pred CCcCcCHHHHHHHHHHcCCeEEEECCCc
Confidence 4678999999999999999999999954
No 262
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=67.69 E-value=30 Score=38.71 Aligned_cols=51 Identities=16% Similarity=-0.001 Sum_probs=37.1
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEe--CCHhhHHHhhh
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYL--SSLGDMLPFLS 382 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi--~sl~eL~~~l~ 382 (383)
+-+.|+||. .||..+.++|. |.|.-|.++ |.++. -+|.++ +++..+.+.++
T Consensus 638 ~vVam~GDG-vNDaPALk~AD---VGIAmg~gt--dvAke-----------aADiVLldd~~~~I~~ai~ 690 (902)
T PRK10517 638 HVVGFMGDG-INDAPALRAAD---IGISVDGAV--DIARE-----------AADIILLEKSLMVLEEGVI 690 (902)
T ss_pred CEEEEECCC-cchHHHHHhCC---EEEEeCCcC--HHHHH-----------hCCEEEecCChHHHHHHHH
Confidence 569999999 99999999999 666666333 33321 467777 67777776654
No 263
>TIGR01544 HAD-SF-IE haloacid dehalogenase superfamily, subfamily IE hydrolase, TIGR01544. This group of sequences was found during searches for members of the haloacid dehalogenase (HAD) superfamily. All of the conserved catalytic motifs are found. The placement of the variable domain between motifs 1 and 2 indicates membership in subfamily I of the superfamily, but these sequences are sufficiently different from any of the branches (IA, TIGR01493, TIGR01509, TIGR01549; IB, TIGR01488; IC, TIGR01494; ID, TIGR01658; IF TIGR01545) of that subfamily as to constitute a separate branch to now be called IE. Considering that the closest identifiable hit outside of the noise range is to a phosphoserine phosphatase, this group may be considered to be most closely allied to subfamily IB.
Probab=67.51 E-value=12 Score=35.87 Aligned_cols=42 Identities=17% Similarity=0.231 Sum_probs=32.5
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
-.+.||+.++++.+++.|+++.++|+.. ..-+...|+.+|+.
T Consensus 120 l~l~pG~~efl~~L~~~GIpv~IvS~G~---~~~Ie~vL~~lgl~ 161 (277)
T TIGR01544 120 VMLKDGYENFFDKLQQHSIPVFIFSAGI---GNVLEEVLRQAGVY 161 (277)
T ss_pred CccCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHHcCCC
Confidence 4678999999999999999999999843 24445556666763
No 264
>TIGR02254 YjjG/YfnB HAD superfamily (subfamily IA) hydrolase, TIGR02254. This family is a member of the haloacid dehalogenase (HAD) superfamily of hydrolases which are characterized by three conserved sequence motifs. By virtue of an alpha helical domain in-between the first and second conserved motif, this family is a member of subfamily IA (TIGR01549). Most likely, these enzymes are phosphatases.
Probab=67.08 E-value=8.5 Score=34.55 Aligned_cols=50 Identities=26% Similarity=0.414 Sum_probs=37.5
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
.+++|++.++++.+++. +++.++||.. ...+...++.+|+.-..+.++.+
T Consensus 96 ~~~~~g~~~~L~~l~~~-~~~~i~Sn~~---~~~~~~~l~~~~l~~~fd~i~~~ 145 (224)
T TIGR02254 96 HQLLPGAFELMENLQQK-FRLYIVTNGV---RETQYKRLRKSGLFPFFDDIFVS 145 (224)
T ss_pred CeeCccHHHHHHHHHhc-CcEEEEeCCc---hHHHHHHHHHCCcHhhcCEEEEc
Confidence 46789999999999999 9999999943 44555667778876444555543
No 265
>COG2217 ZntA Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=66.25 E-value=25 Score=38.15 Aligned_cols=84 Identities=29% Similarity=0.450 Sum_probs=54.2
Q ss_pred EEEEecCCcee----cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHH-HHHHH
Q psy7233 97 TVLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYL-AAQYL 171 (383)
Q Consensus 97 aViFDlDGTL~----d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~-~~~~l 171 (383)
.+++-.||.+. -.+++-|.|.+++++|++.|++++++|+...++.+.++ +++|++--..++...... ..+.+
T Consensus 519 ~v~va~dg~~~g~i~~~D~~R~~a~~aI~~L~~~Gi~~~mLTGDn~~~A~~iA---~~lGId~v~AellPedK~~~V~~l 595 (713)
T COG2217 519 VVFVAVDGKLVGVIALADELRPDAKEAIAALKALGIKVVMLTGDNRRTAEAIA---KELGIDEVRAELLPEDKAEIVREL 595 (713)
T ss_pred EEEEEECCEEEEEEEEeCCCChhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH---HHcChHhheccCCcHHHHHHHHHH
Confidence 58999999643 35788999999999999999999999996554444443 357875322333222111 11223
Q ss_pred HhcCCCCCeEEEEeC
Q psy7233 172 KKHLDPKKKAYIVGS 186 (383)
Q Consensus 172 ~~~~~~~~~~~~ig~ 186 (383)
++ .++++.++|.
T Consensus 596 ~~---~g~~VamVGD 607 (713)
T COG2217 596 QA---EGRKVAMVGD 607 (713)
T ss_pred Hh---cCCEEEEEeC
Confidence 32 2356777764
No 266
>TIGR01488 HAD-SF-IB Haloacid Dehalogenase superfamily, subfamily IB, phosphoserine phosphatase-like. Subfamily IA includes the enzyme phosphoserine phosphatase (TIGR00338) as well as three hypothetical equivalogs. Many members of these hypothetical equivalogs have been annotated as PSPase-like or PSPase-family proteins. In particular, the hypothetical equivalog which appears to be most closely related to PSPase contains only Archaea (while TIGR00338 contains only eukaryotes and bacteria) of which some are annotated as PSPases. Although this is a reasonable conjecture, none of these sequences has sufficient evidence for this assignment. If such should be found, this model should be retired while the PSPase model should be broadened to include these sequences.
Probab=65.07 E-value=15 Score=31.68 Aligned_cols=41 Identities=22% Similarity=0.241 Sum_probs=30.9
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.|++.+.++.++++|++++++|+.. ...+...+..+|++
T Consensus 73 ~~~~g~~~~l~~l~~~g~~~~ivS~~~---~~~i~~~~~~~g~~ 113 (177)
T TIGR01488 73 ALRPGARELISWLKERGIDTVIVSGGF---DFFVEPVAEKLGID 113 (177)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEECCCc---HHHHHHHHHHcCCc
Confidence 456899999999999999999999943 33344445567764
No 267
>PF04312 DUF460: Protein of unknown function (DUF460); InterPro: IPR007408 This is an archaeal protein of unknown function.
Probab=64.95 E-value=19 Score=30.50 Aligned_cols=55 Identities=18% Similarity=0.229 Sum_probs=37.1
Q ss_pred EEEEecCCceecC--CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHh-cCCC
Q psy7233 97 TVLTDCDGVLWLE--NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKH-LGFN 154 (383)
Q Consensus 97 aViFDlDGTL~d~--~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~-lG~~ 154 (383)
.-++|+||.+++- .+- -...+.++.+.+.|.|++++|.-++. .+..+++.. +|-.
T Consensus 45 iAildL~G~~l~l~S~R~-~~~~evi~~I~~~G~PviVAtDV~p~--P~~V~Kia~~f~A~ 102 (138)
T PF04312_consen 45 IAILDLDGELLDLKSSRN-MSRSEVIEWISEYGKPVIVATDVSPP--PETVKKIARSFNAV 102 (138)
T ss_pred EEEEecCCcEEEEEeecC-CCHHHHHHHHHHcCCEEEEEecCCCC--cHHHHHHHHHhCCc
Confidence 3489999998763 222 23457889999999999999984433 344455543 5543
No 268
>TIGR01490 HAD-SF-IB-hyp1 HAD-superfamily subfamily IB hydrolase, TIGR01490. A subset of these sequences, including the Caulobacter crescentus CicA protein, cluster together and may represent a separate equivalog.
Probab=64.29 E-value=16 Score=32.39 Aligned_cols=41 Identities=20% Similarity=0.191 Sum_probs=30.7
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.|++.+.++.++++|++++++|+.. ..-+...++.+|++
T Consensus 87 ~~~~~~~~~l~~l~~~g~~v~ivS~s~---~~~v~~~~~~lg~~ 127 (202)
T TIGR01490 87 ILYPEARDLIRWHKAEGHTIVLVSASL---TILVKPLARILGID 127 (202)
T ss_pred hccHHHHHHHHHHHHCCCEEEEEeCCc---HHHHHHHHHHcCCc
Confidence 578999999999999999999999833 22333334457765
No 269
>PLN02940 riboflavin kinase
Probab=63.98 E-value=9.6 Score=38.08 Aligned_cols=88 Identities=20% Similarity=0.304 Sum_probs=50.9
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHH-hcCCCCCcCcccchHH---------HHHHHHHhcCCC-C
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLK-HLGFNAEPNEIIGTAY---------LAAQYLKKHLDP-K 178 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~-~lG~~i~~~~i~~s~~---------~~~~~l~~~~~~-~ 178 (383)
..++||+.+.++.|+++|+++.++||.+ ...+...+. ..|+.-..+.++++.. .....+.+. +. .
T Consensus 92 ~~l~pGv~elL~~Lk~~g~~l~IvTn~~---~~~~~~~l~~~~gl~~~Fd~ii~~d~v~~~KP~p~~~~~a~~~l-gv~p 167 (382)
T PLN02940 92 IKALPGANRLIKHLKSHGVPMALASNSP---RANIEAKISCHQGWKESFSVIVGGDEVEKGKPSPDIFLEAAKRL-NVEP 167 (382)
T ss_pred CCCCcCHHHHHHHHHHCCCcEEEEeCCc---HHHHHHHHHhccChHhhCCEEEehhhcCCCCCCHHHHHHHHHHc-CCCh
Confidence 3568999999999999999999999943 334444554 4565433334443321 112222221 22 3
Q ss_pred CeEEEEeCc-chHHHHHHcCCccc
Q psy7233 179 KKAYIVGSS-GIADELNLAGIENF 201 (383)
Q Consensus 179 ~~~~~ig~~-~l~~~l~~~gi~~~ 201 (383)
..+.++|.. .-++..+..|+...
T Consensus 168 ~~~l~VGDs~~Di~aA~~aGi~~I 191 (382)
T PLN02940 168 SNCLVIEDSLPGVMAGKAAGMEVI 191 (382)
T ss_pred hHEEEEeCCHHHHHHHHHcCCEEE
Confidence 455666643 33445566777754
No 270
>cd07041 STAS_RsbR_RsbS_like Sulphate Transporter and Anti-Sigma factor antagonist domain of the "stressosome" complex proteins RsbS and RsbR, regulators of the bacterial stress activated alternative sigma factor sigma-B by phosphorylation. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain of proteins related to RsbS and RsbR which are part of the "stressosome" complex that plays an important role in the regulation of the bacterial stress activated alternative sigma factor sigma-B. During stress conditions RsbS and RsbR are phosphorylated which leads to the release of RsbT, an activator of of the RsbU phosphatase, which in turn activates RsbV which leads to the release and activation of sigma factor B. RsbS is a single domain protein (STAS domain), while RsbR-like proteins have a well-conserved C-terminal STATS domain and a variable N-terminal domain. The STAS domain is also found in the C- terminal region of sulphate transporters and anti-anti-sigma factors.
Probab=63.56 E-value=26 Score=27.72 Aligned_cols=58 Identities=19% Similarity=0.287 Sum_probs=41.5
Q ss_pred cCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 93 NSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
+..+.+++|+-|+=+-....+..-.+..+.+++.|..+.++.- .+++.+.|...|++.
T Consensus 39 ~~~~~vvlDls~v~~iDssg~~~l~~~~~~~~~~g~~l~l~g~-----~~~v~~~l~~~gl~~ 96 (109)
T cd07041 39 RRARGVIIDLTGVPVIDSAVARHLLRLARALRLLGARTILTGI-----RPEVAQTLVELGIDL 96 (109)
T ss_pred cCCCEEEEECCCCchhcHHHHHHHHHHHHHHHHcCCeEEEEeC-----CHHHHHHHHHhCCCh
Confidence 3578999999998543334445556677788889988877653 356777888788754
No 271
>TIGR01549 HAD-SF-IA-v1 haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E. HAD subfamilies caused by an overly broad single model.
Probab=63.07 E-value=9.5 Score=32.16 Aligned_cols=37 Identities=27% Similarity=0.444 Sum_probs=28.2
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHH
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIV 146 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~ 146 (383)
...++|+.++++.|+++|+++.++||..........+
T Consensus 63 ~~~~~g~~e~l~~L~~~g~~~~i~T~~~~~~~~~~~~ 99 (154)
T TIGR01549 63 EAYIRGAADLLKRLKEAGIKLGIISNGSLRAQKLLLR 99 (154)
T ss_pred heeccCHHHHHHHHHHCcCeEEEEeCCchHHHHHHHH
Confidence 4456899999999999999999999955444333333
No 272
>PRK09456 ?-D-glucose-1-phosphatase; Provisional
Probab=60.43 E-value=13 Score=33.07 Aligned_cols=27 Identities=19% Similarity=0.394 Sum_probs=24.7
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
.++|++.++++.+++.|+++.++||..
T Consensus 84 ~~~~g~~e~L~~l~~~g~~~~i~Sn~~ 110 (199)
T PRK09456 84 ALRPEVIAIMHKLREQGHRVVVLSNTN 110 (199)
T ss_pred ccCHHHHHHHHHHHhCCCcEEEEcCCc
Confidence 468999999999999999999999954
No 273
>COG0560 SerB Phosphoserine phosphatase [Amino acid transport and metabolism]
Probab=60.23 E-value=18 Score=33.07 Aligned_cols=41 Identities=24% Similarity=0.472 Sum_probs=32.3
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHH-hcCCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLK-HLGFNA 155 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~-~lG~~i 155 (383)
.+.|+|.+.++.+++.|.+++++|+ +...+.+.+. .+|++.
T Consensus 77 ~l~~ga~elv~~lk~~G~~v~iiSg----g~~~lv~~ia~~lg~d~ 118 (212)
T COG0560 77 RLTPGAEELVAALKAAGAKVVIISG----GFTFLVEPIAERLGIDY 118 (212)
T ss_pred cCCccHHHHHHHHHHCCCEEEEEcC----ChHHHHHHHHHHhCCch
Confidence 4579999999999999999999998 3445555554 488873
No 274
>KOG0202|consensus
Probab=60.11 E-value=51 Score=36.27 Aligned_cols=43 Identities=12% Similarity=0.269 Sum_probs=32.8
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
+++-++..++++.+++.|+.|..+|+....+...+++ +.|+.-
T Consensus 583 DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r---~iGi~~ 625 (972)
T KOG0202|consen 583 DPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAR---EIGIFS 625 (972)
T ss_pred CCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHH---HhCCCc
Confidence 4678999999999999999999999965555444443 456543
No 275
>PRK08508 biotin synthase; Provisional
Probab=59.63 E-value=1.6e+02 Score=27.91 Aligned_cols=135 Identities=9% Similarity=0.031 Sum_probs=69.8
Q ss_pred ChhhHHHhhc-----CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcC
Q psy7233 84 SGDKQKDFLN-----SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPN 158 (383)
Q Consensus 84 ~~~~~~~~~~-----~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~ 158 (383)
+++++.+... ..+.+.+ +++........++...+.++.+++.+..+.+.+..+ ....+.++.|++.|++.-.-
T Consensus 41 s~eeI~~~a~~a~~~g~~~~~l-v~sg~~~~~~~~e~~~ei~~~ik~~~p~l~i~~s~G-~~~~e~l~~Lk~aGld~~~~ 118 (279)
T PRK08508 41 DIEQIVQEAKMAKANGALGFCL-VTSGRGLDDKKLEYVAEAAKAVKKEVPGLHLIACNG-TASVEQLKELKKAGIFSYNH 118 (279)
T ss_pred CHHHHHHHHHHHHHCCCCEEEE-EeccCCCCcccHHHHHHHHHHHHhhCCCcEEEecCC-CCCHHHHHHHHHcCCCEEcc
Confidence 4555544322 3555655 332221123345667788888888764443332223 33466778888888864333
Q ss_pred cccchHHHHHHHHHhcCCCCCeEEEEeCcc---hHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEecc
Q psy7233 159 EIIGTAYLAAQYLKKHLDPKKKAYIVGSSG---IADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFD 235 (383)
Q Consensus 159 ~i~~s~~~~~~~l~~~~~~~~~~~~ig~~~---l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~ 235 (383)
.+-++ .+++.+. ... -..+. ..+..++.|+++. .-+++|.
T Consensus 119 ~lEt~----~~~~~~i-~~~-----~~~~~~l~~i~~a~~~Gi~v~--------------------------sg~I~Gl- 161 (279)
T PRK08508 119 NLETS----KEFFPKI-CTT-----HTWEERFQTCENAKEAGLGLC--------------------------SGGIFGL- 161 (279)
T ss_pred cccch----HHHhcCC-CCC-----CCHHHHHHHHHHHHHcCCeec--------------------------ceeEEec-
Confidence 33332 1222221 100 01122 2334667777654 2356664
Q ss_pred CCCChhhHHHHHHHhhCCCCEEE
Q psy7233 236 SHISFPKLMKAACYLTNPNTLFV 258 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~~~i 258 (383)
..++++..+.+..+++-+..-+
T Consensus 162 -GEt~ed~~~~l~~lr~L~~~sv 183 (279)
T PRK08508 162 -GESWEDRISFLKSLASLSPHST 183 (279)
T ss_pred -CCCHHHHHHHHHHHHcCCCCEE
Confidence 4557888888888887555433
No 276
>PLN02779 haloacid dehalogenase-like hydrolase family protein
Probab=59.58 E-value=10 Score=36.18 Aligned_cols=38 Identities=16% Similarity=0.225 Sum_probs=29.3
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhc
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHL 151 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~l 151 (383)
.++||+.++|+.++++|+++.++||. +...+...+..+
T Consensus 144 ~l~pGv~elL~~L~~~g~~l~IvTn~---~~~~~~~~l~~~ 181 (286)
T PLN02779 144 PLRPGVLRLMDEALAAGIKVAVCSTS---NEKAVSKIVNTL 181 (286)
T ss_pred CchhhHHHHHHHHHHCCCeEEEEeCC---CHHHHHHHHHHh
Confidence 67899999999999999999999994 334444444433
No 277
>PLN02177 glycerol-3-phosphate acyltransferase
Probab=57.96 E-value=6.1 Score=40.98 Aligned_cols=20 Identities=30% Similarity=0.411 Sum_probs=16.4
Q ss_pred CCEEEEecCCceecCCccCh
Q psy7233 95 FDTVLTDCDGVLWLENELIS 114 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p 114 (383)
-+.++||+||||+.+...++
T Consensus 22 ~~~~~FDfDGTLt~~~s~f~ 41 (497)
T PLN02177 22 NQTVAADLDGTLLISRSAFP 41 (497)
T ss_pred ccEEEEecCCcccCCCCccH
Confidence 46899999999999765555
No 278
>TIGR01658 EYA-cons_domain eyes absent protein conserved domain. This domain is common to all eyes absent (EYA) homologs. Metazoan EYA's also contain a variable N-terminal domain consisting largely of low-complexity sequences.
Probab=57.44 E-value=24 Score=33.03 Aligned_cols=48 Identities=15% Similarity=0.125 Sum_probs=42.4
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
..|| ...|+.+.+++|-+...-++|||. ..--.+|+..++..+-|...
T Consensus 212 kvGK--~~cFe~I~~Rfg~p~~~f~~IGDG-~eEe~aAk~l~wPFw~I~~h 259 (274)
T TIGR01658 212 KVGK--LQCFKWIKERFGHPKVRFCAIGDG-WEECTAAQAMNWPFVKIDLH 259 (274)
T ss_pred hcch--HHHHHHHHHHhCCCCceEEEeCCC-hhHHHHHHhcCCCeEEeecC
Confidence 4677 667999999999888999999999 77789999999999998775
No 279
>TIGR01691 enolase-ppase 2,3-diketo-5-methylthio-1-phosphopentane phosphatase. This enzyme is the enolase-phosphatase of methionine salvage, a pathway that regenerates methionine from methylthioadenosine (MTA). Adenosylmethionine (AdoMet) is a donor of different moieties for various processes, including methylation reactions. Use of AdoMet for spermidine biosynthesis, which leads to polyamine biosynthesis, leaves MTA as a by-product that must be cleared. In Bacillus subtilis and related species, this single protein is replaced by separate enzymes with enolase and phosphatase activities.
Probab=56.75 E-value=11 Score=34.54 Aligned_cols=27 Identities=15% Similarity=0.251 Sum_probs=24.6
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
.++|++.++|++|+++|+++.++||.+
T Consensus 95 ~lypgv~e~L~~Lk~~G~~l~I~Sn~s 121 (220)
T TIGR01691 95 HLYPDVPPALEAWLQLGLRLAVYSSGS 121 (220)
T ss_pred CcCcCHHHHHHHHHHCCCEEEEEeCCC
Confidence 578999999999999999999999943
No 280
>PRK10671 copA copper exporting ATPase; Provisional
Probab=56.08 E-value=80 Score=35.03 Aligned_cols=101 Identities=18% Similarity=0.216 Sum_probs=61.2
Q ss_pred CCCEEEEecCCcee----cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHH
Q psy7233 94 SFDTVLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQ 169 (383)
Q Consensus 94 ~~kaViFDlDGTL~----d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~ 169 (383)
....+++-.||++. -.+++.|++.++++.+++.|+++.++|+. +.......++.+|++....++. +.+. .+
T Consensus 629 g~~~v~va~~~~~~g~~~l~d~~r~~a~~~i~~L~~~gi~v~~~Tgd---~~~~a~~ia~~lgi~~~~~~~~-p~~K-~~ 703 (834)
T PRK10671 629 GATPVLLAVDGKAAALLAIRDPLRSDSVAALQRLHKAGYRLVMLTGD---NPTTANAIAKEAGIDEVIAGVL-PDGK-AE 703 (834)
T ss_pred CCeEEEEEECCEEEEEEEccCcchhhHHHHHHHHHHCCCeEEEEcCC---CHHHHHHHHHHcCCCEEEeCCC-HHHH-HH
Confidence 35667777788754 45788999999999999999999999994 3444445556688863222222 1111 22
Q ss_pred HHHhcCCCCCeEEEEeCc-chHHHHHHcCCc
Q psy7233 170 YLKKHLDPKKKAYIVGSS-GIADELNLAGIE 199 (383)
Q Consensus 170 ~l~~~~~~~~~~~~ig~~-~l~~~l~~~gi~ 199 (383)
.+.+.-..+..+.++|.. .-...++..|+-
T Consensus 704 ~i~~l~~~~~~v~~vGDg~nD~~al~~Agvg 734 (834)
T PRK10671 704 AIKRLQSQGRQVAMVGDGINDAPALAQADVG 734 (834)
T ss_pred HHHHHhhcCCEEEEEeCCHHHHHHHHhCCee
Confidence 222210123467777754 233455555553
No 281
>TIGR03333 salvage_mtnX 2-hydroxy-3-keto-5-methylthiopentenyl-1-phosphate phosphatase. Members of this family are the methionine salvage enzyme MnxX, a member of the HAD-superfamily hydrolases, subfamily IB (see TIGR01488). Members are found in Bacillus subtilis and related species, paired with MtnW (TIGR03332). In most species that recycle methionine from methylthioadenosine, the single protein MtnC replaces the MtnW/MtnX pair. In B. subtilis, mtnX was first known as ykrX.
Probab=55.97 E-value=13 Score=33.54 Aligned_cols=27 Identities=11% Similarity=0.303 Sum_probs=24.7
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
..+.||+.++++.++++|+++.++|+.
T Consensus 69 ~~l~pg~~e~l~~l~~~g~~~~IvS~~ 95 (214)
T TIGR03333 69 AEIREGFREFVAFINEHGIPFYVISGG 95 (214)
T ss_pred CcccccHHHHHHHHHHCCCeEEEECCC
Confidence 467899999999999999999999994
No 282
>TIGR01452 PGP_euk phosphoglycolate/pyridoxal phosphate phosphatase family. This model is closely related to a family of bacterial sequences including the E. coli NagD and B. subtilus AraL genes which are characterized by the ability to hydrolyze para-nitrophenylphosphate (pNPPases or NPPases). The chlamydomonas PGPase does not catalyze this reaction and so presumably these two groups have different functions and substrate specificities. Many of the genes in this alignment have been annotated as pNPPases due to this association.
Probab=55.54 E-value=55 Score=30.89 Aligned_cols=89 Identities=11% Similarity=0.008 Sum_probs=49.7
Q ss_pred CCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCC--HHHHHHHHHHcCCC
Q psy7233 237 HISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPS--KLIGSYLIEKYNLN 313 (383)
Q Consensus 237 ~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~--p~~~~~al~~lgi~ 313 (383)
...+++..++++.|+++|+++ ++||+...... .+...+.. .|.. ....++- .......+++.+..
T Consensus 17 ~~~~~ga~e~l~~L~~~g~~~~~~Tnns~~~~~----------~~~~~l~~-~G~~-~~~~~i~ts~~~~~~~l~~~~~~ 84 (279)
T TIGR01452 17 ERVVPGAPELLDRLARAGKAALFVTNNSTKSRA----------EYALKFAR-LGFN-GLAEQLFSSALCAARLLRQPPDA 84 (279)
T ss_pred CeeCcCHHHHHHHHHHCCCeEEEEeCCCCCCHH----------HHHHHHHH-cCCC-CChhhEecHHHHHHHHHHhhCcC
Confidence 345788999999999999876 77875432110 12222221 1211 0111211 23344455554444
Q ss_pred CCcEEEEecCchhhHHHHHHcCCcEE
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNGFQTL 339 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aGl~tv 339 (383)
..+++++|+. . .....+..|+..+
T Consensus 85 ~~~v~~iG~~-~-~~~~l~~~g~~~~ 108 (279)
T TIGR01452 85 PKAVYVIGEE-G-LRAELDAAGIRLA 108 (279)
T ss_pred CCEEEEEcCH-H-HHHHHHHCCCEEe
Confidence 6789999987 2 2455677887654
No 283
>TIGR00377 ant_ant_sig anti-anti-sigma factor. This superfamily includes small (105-125 residue) proteins related to SpoIIAA of Bacillus subtilis, an anti-anti-sigma factor. SpoIIAA can bind to and inhibit the anti-sigma F factor SpoIIAB. Also, it can be phosphorylated by SpoIIAB on a Ser residue at position 59 of the seed alignment. A similar arrangement is inferred for RsbV, an anti-anti-sigma factor for sigma B. This Ser is fairly well conserved within a motif resembling MXS[STA]G[VIL]X[VIL][VILF] among homologous known or predicted anti-anti-sigma factors. Regions similar to SpoIIAA and apparently homologous, but differing considerably near the phosphorlated Ser of SpoIIAA, appear in a single copy in several longer proteins.
Probab=55.13 E-value=56 Score=25.52 Aligned_cols=56 Identities=9% Similarity=0.159 Sum_probs=38.2
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..+.+++|+.|+=.-.......-.+..+.++++|..+.++.- .+.+.+.++..|+.
T Consensus 42 ~~~~vvidls~v~~iDssgl~~L~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~~l~ 97 (108)
T TIGR00377 42 GPRPIVLDLEDLEFMDSSGLGVLLGRYKQVRRVGGQLVLVSV-----SPRVARLLDITGLL 97 (108)
T ss_pred CCCeEEEECCCCeEEccccHHHHHHHHHHHHhcCCEEEEEeC-----CHHHHHHHHHhChh
Confidence 578999999998543334455555677778888888777653 34566666666654
No 284
>TIGR02137 HSK-PSP phosphoserine phosphatase/homoserine phosphotransferase bifunctional protein. This enzyme is a member of the haloacid dehalogenase (HAD) superfamily, specifically part of subfamily IB by virtue of the presence of an alpha helical domain in between motifs I and II of the HAD domain . The closest homologs to this family are monofunctional phosphoserine phosphatases (TIGR00338).
Probab=55.12 E-value=24 Score=31.88 Aligned_cols=41 Identities=17% Similarity=0.235 Sum_probs=30.6
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
-++.|++.++++.+++.+ +++++|+.. ..-+...++.+|++
T Consensus 67 i~l~pga~ell~~lk~~~-~~~IVS~~~---~~~~~~il~~lgi~ 107 (203)
T TIGR02137 67 LKPLEGAVEFVDWLRERF-QVVILSDTF---YEFSQPLMRQLGFP 107 (203)
T ss_pred CCCCccHHHHHHHHHhCC-eEEEEeCCh---HHHHHHHHHHcCCc
Confidence 357899999999999975 999999932 22333445668876
No 285
>TIGR02886 spore_II_AA anti-sigma F factor antagonist. The anti-sigma F factor antagonist, also called stage II sporulation protein AA, is a protein universal among endospore-forming bacteria, all of which belong to the Firmcutes
Probab=54.51 E-value=45 Score=26.17 Aligned_cols=56 Identities=7% Similarity=0.113 Sum_probs=39.8
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..+.+++|+-|+=+-....+..-...++.++++|..+.++.- .+.+.+.|...|+.
T Consensus 38 ~~~~vilDls~v~~iDssgi~~L~~~~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl~ 93 (106)
T TIGR02886 38 PIKHLILNLKNVTFMDSSGLGVILGRYKKIKNEGGEVIVCNV-----SPAVKRLFELSGLF 93 (106)
T ss_pred CCCEEEEECCCCcEecchHHHHHHHHHHHHHHcCCEEEEEeC-----CHHHHHHHHHhCCc
Confidence 468999999999554333444455677888899998887653 35677777777764
No 286
>KOG2914|consensus
Probab=54.09 E-value=22 Score=32.78 Aligned_cols=43 Identities=23% Similarity=0.409 Sum_probs=33.7
Q ss_pred ecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHH
Q psy7233 107 WLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLK 149 (383)
Q Consensus 107 ~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~ 149 (383)
+......||+.+.++.|...|+++.++|+..+.+.+.....+.
T Consensus 88 ~~~~~~~PGa~kLv~~L~~~gip~alat~s~~~~~~~k~~~~~ 130 (222)
T KOG2914|consen 88 FMNSILMPGAEKLVNHLKNNGIPVALATSSTSASFELKISRHE 130 (222)
T ss_pred ccccccCCcHHHHHHHHHhCCCCeeEEecCCcccHHHHHHHhh
Confidence 3345668899999999999999999999976776665544443
No 287
>PRK13582 thrH phosphoserine phosphatase; Provisional
Probab=53.25 E-value=26 Score=30.99 Aligned_cols=42 Identities=14% Similarity=0.226 Sum_probs=31.2
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
...++||+.++++.++++ +++.++||.. .......+..+|++
T Consensus 66 ~~~~~pg~~e~L~~L~~~-~~~~IvS~~~---~~~~~~~l~~~gl~ 107 (205)
T PRK13582 66 TLDPLPGAVEFLDWLRER-FQVVILSDTF---YEFAGPLMRQLGWP 107 (205)
T ss_pred hCCCCCCHHHHHHHHHhc-CCEEEEeCCc---HHHHHHHHHHcCCc
Confidence 345689999999999999 9999999943 33444455667764
No 288
>TIGR01522 ATPase-IIA2_Ca golgi membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1 the former of which is modelled by TIGR01116.
Probab=51.82 E-value=34 Score=38.24 Aligned_cols=59 Identities=17% Similarity=0.346 Sum_probs=42.7
Q ss_pred CCCEEEEecC---------CceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 94 SFDTVLTDCD---------GVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 94 ~~kaViFDlD---------GTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
.++.+.|=.+ |.+.-.+++.|++.++++.+++.|+++.++||....+. ....+++|+.-
T Consensus 502 G~rvl~~A~~~~~~~l~~lGli~l~Dp~r~~~~~~i~~l~~~Gi~v~miTGD~~~tA---~~ia~~~Gi~~ 569 (884)
T TIGR01522 502 GLRVIAFASGPEKGQLTFLGLVGINDPPRPGVKEAVTTLITGGVRIIMITGDSQETA---VSIARRLGMPS 569 (884)
T ss_pred CCEEEEEEEEcCCCCeEEEEEEeccCcchhHHHHHHHHHHHCCCeEEEECCCCHHHH---HHHHHHcCCCC
Confidence 4677766443 33444578899999999999999999999999544444 44445677753
No 289
>PF13344 Hydrolase_6: Haloacid dehalogenase-like hydrolase; PDB: 2HO4_B 1YV9_A 1WVI_B 3EPR_A 2P27_A 2OYC_A 2CFT_A 2P69_A 2CFS_A 2CFR_A ....
Probab=51.74 E-value=32 Score=27.31 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=22.4
Q ss_pred CCCChhhHHHHHHHhhCCCCEE-EEecCCCC
Q psy7233 236 SHISFPKLMKAACYLTNPNTLF-VATNTDES 265 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~ 265 (383)
....+++..+++..|+++|.++ ++||+...
T Consensus 12 g~~~ipga~e~l~~L~~~g~~~~~lTNns~~ 42 (101)
T PF13344_consen 12 GNEPIPGAVEALDALRERGKPVVFLTNNSSR 42 (101)
T ss_dssp TTEE-TTHHHHHHHHHHTTSEEEEEES-SSS
T ss_pred CCCcCcCHHHHHHHHHHcCCCEEEEeCCCCC
Confidence 3445899999999999998876 78886554
No 290
>COG4996 Predicted phosphatase [General function prediction only]
Probab=51.66 E-value=15 Score=31.05 Aligned_cols=76 Identities=11% Similarity=0.166 Sum_probs=44.6
Q ss_pred CChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHH---HHHc----
Q psy7233 238 ISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYL---IEKY---- 310 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~a---l~~l---- 310 (383)
..|+.+.+.+..+++.|..+...+-+.... ....+....+..+|. +.+-+|+|--++.. ++.+
T Consensus 41 ~L~~~v~~~l~warnsG~i~~~~sWN~~~k---A~~aLral~~~~yFh-------y~ViePhP~K~~ML~~llr~i~~er 110 (164)
T COG4996 41 HLFPDVKETLKWARNSGYILGLASWNFEDK---AIKALRALDLLQYFH-------YIVIEPHPYKFLMLSQLLREINTER 110 (164)
T ss_pred EEcHHHHHHHHHHHhCCcEEEEeecCchHH---HHHHHHHhchhhhEE-------EEEecCCChhHHHHHHHHHHHHHhh
Confidence 358999999999999888764332221111 001111122222322 45678888554433 3333
Q ss_pred --CCCCCcEEEEecC
Q psy7233 311 --NLNPERTLMIGDR 323 (383)
Q Consensus 311 --gi~p~e~l~IGDs 323 (383)
.+.|.+++++.|+
T Consensus 111 ~~~ikP~~Ivy~DDR 125 (164)
T COG4996 111 NQKIKPSEIVYLDDR 125 (164)
T ss_pred ccccCcceEEEEecc
Confidence 4789999999999
No 291
>cd07043 STAS_anti-anti-sigma_factors Sulphate Transporter and Anti-Sigma factor antagonist) domain of anti-anti-sigma factors, key regulators of anti-sigma factors by phosphorylation. Anti-anti-sigma factors play an important role in the regulation of several sigma factors and their corresponding anti-sigma factors. Upon dephosphorylation they bind the anti-sigma factor and induce the release of the sigma factor from the anti-sigma factor. In a feedback mechanism the anti-anti-sigma factor can be inactivated via phosphorylation by the anti-sigma factor. Well studied examples from Bacillus subtilis are SpoIIAA (regulating sigmaF and sigmaC which play an important role in sporulation) and RsbV (regulating sigmaB involved in the general stress response). The STAS domain is also found in the C- terminal region of sulphate transporters and stressosomes.
Probab=51.61 E-value=54 Score=24.87 Aligned_cols=55 Identities=13% Similarity=0.197 Sum_probs=38.2
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.+++|+.++=.-.......-.++.+.++++|..+.+..- .+++.+.++..|+.
T Consensus 38 ~~~viid~~~v~~iDs~g~~~L~~l~~~~~~~g~~v~i~~~-----~~~~~~~l~~~gl~ 92 (99)
T cd07043 38 PRRLVLDLSGVTFIDSSGLGVLLGAYKRARAAGGRLVLVNV-----SPAVRRVLELTGLD 92 (99)
T ss_pred CCEEEEECCCCCEEcchhHHHHHHHHHHHHHcCCeEEEEcC-----CHHHHHHHHHhCcc
Confidence 58999999998543344455566777888888988766543 24666777767653
No 292
>PRK01122 potassium-transporting ATPase subunit B; Provisional
Probab=50.56 E-value=17 Score=39.26 Aligned_cols=58 Identities=16% Similarity=0.273 Sum_probs=43.1
Q ss_pred CCCEEEEecCCcee----cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~----d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..+.+.+-.|+++. -.+++-|++.++++++++.|++++++|+....+...++ +++|++
T Consensus 424 G~~~l~va~~~~~lG~i~l~D~~R~~~~eai~~Lr~~GI~vvMiTGDn~~TA~aIA---~elGId 485 (679)
T PRK01122 424 GGTPLVVAEDNRVLGVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIA---AEAGVD 485 (679)
T ss_pred CCcEEEEEECCeEEEEEEEeccCchhHHHHHHHHHHCCCeEEEECCCCHHHHHHHH---HHcCCc
Confidence 35677776666643 35788899999999999999999999996544444443 457875
No 293
>PLN02499 glycerol-3-phosphate acyltransferase
Probab=49.87 E-value=11 Score=38.85 Aligned_cols=21 Identities=19% Similarity=0.347 Sum_probs=16.3
Q ss_pred CCCEEEEecCCceecCCccCh
Q psy7233 94 SFDTVLTDCDGVLWLENELIS 114 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p 114 (383)
..++++||+||||+.+...+|
T Consensus 7 ~~~~~~fD~DGTLlrs~ssFp 27 (498)
T PLN02499 7 TSYSVVSELEGTLLKDADPFS 27 (498)
T ss_pred ccceEEEecccceecCCCccH
Confidence 356899999999998655443
No 294
>PRK14010 potassium-transporting ATPase subunit B; Provisional
Probab=49.23 E-value=18 Score=38.98 Aligned_cols=57 Identities=16% Similarity=0.242 Sum_probs=40.4
Q ss_pred CCEEEEecCCcee----cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~----d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.+..-.|+++. -.+++-|++.++++++++.|++++++|+....+...+ -+++|++
T Consensus 421 ~~~l~v~~~~~~lG~i~l~Dp~R~~a~e~I~~Lr~~GI~vvMiTGDn~~TA~aI---A~elGI~ 481 (673)
T PRK14010 421 GTPLVVLEDNEILGVIYLKDVIKDGLVERFRELREMGIETVMCTGDNELTAATI---AKEAGVD 481 (673)
T ss_pred CeEEEEEECCEEEEEEEeecCCcHHHHHHHHHHHHCCCeEEEECCCCHHHHHHH---HHHcCCc
Confidence 4555443355543 3468889999999999999999999999554444433 4457875
No 295
>PLN02811 hydrolase
Probab=49.21 E-value=19 Score=32.53 Aligned_cols=28 Identities=25% Similarity=0.470 Sum_probs=25.2
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
..++||+.++|+.|++.|+++.++||..
T Consensus 77 ~~l~~gv~e~l~~L~~~g~~~~i~S~~~ 104 (220)
T PLN02811 77 SDLMPGAERLVRHLHAKGIPIAIATGSH 104 (220)
T ss_pred CCCCccHHHHHHHHHHCCCcEEEEeCCc
Confidence 4578999999999999999999999943
No 296
>COG1419 FlhF Flagellar GTP-binding protein [Cell motility and secretion]
Probab=49.12 E-value=37 Score=34.16 Aligned_cols=76 Identities=20% Similarity=0.306 Sum_probs=45.1
Q ss_pred HHHHHHHHHHHHHhhhhceeecccccccccccccccCChhhHHHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHc
Q psy7233 47 EKLQELQQYFCHKFIALKCIVATSQTTVMKLINLSELSGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSL 126 (383)
Q Consensus 47 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~ 126 (383)
+++.||..|+-+.+=.+-+++++..+ +-..++++.++|. .|.+||.++.-..=-...-..++.+.+.
T Consensus 298 ~~i~el~~~~~~~~~i~~~Lvlsat~-----------K~~dlkei~~~f~--~~~i~~~I~TKlDET~s~G~~~s~~~e~ 364 (407)
T COG1419 298 EKIEELKELIDVSHSIEVYLVLSATT-----------KYEDLKEIIKQFS--LFPIDGLIFTKLDETTSLGNLFSLMYET 364 (407)
T ss_pred HHHHHHHHHHhccccceEEEEEecCc-----------chHHHHHHHHHhc--cCCcceeEEEcccccCchhHHHHHHHHh
Confidence 35556666666665556666666544 2344555555554 3455665543200011233578889999
Q ss_pred CceEEEEcC
Q psy7233 127 GKKIFYVTN 135 (383)
Q Consensus 127 Gi~v~ivTn 135 (383)
++|+.++||
T Consensus 365 ~~PV~YvT~ 373 (407)
T COG1419 365 RLPVSYVTN 373 (407)
T ss_pred CCCeEEEeC
Confidence 999999999
No 297
>TIGR01497 kdpB K+-transporting ATPase, B subunit. One sequence is apparently mis-annotated in the primary literature, but properly annotated by TIGR.
Probab=49.09 E-value=33 Score=37.05 Aligned_cols=102 Identities=14% Similarity=0.152 Sum_probs=58.9
Q ss_pred CCCEEEEecCCcee----cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHH
Q psy7233 94 SFDTVLTDCDGVLW----LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQ 169 (383)
Q Consensus 94 ~~kaViFDlDGTL~----d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~ 169 (383)
..+.+.+-.|+++. -.+++-|++.++++.+++.|++++++|+... .......+++|++--..+. ++.+. .+
T Consensus 425 G~r~l~va~~~~~lG~i~l~D~~Rp~a~eaI~~l~~~Gi~v~miTGD~~---~ta~~iA~~lGI~~v~a~~-~PedK-~~ 499 (675)
T TIGR01497 425 GGTPLVVCEDNRIYGVIYLKDIVKGGIKERFAQLRKMGIKTIMITGDNR---LTAAAIAAEAGVDDFIAEA-TPEDK-IA 499 (675)
T ss_pred CCeEEEEEECCEEEEEEEecccchhHHHHHHHHHHHCCCEEEEEcCCCH---HHHHHHHHHcCCCEEEcCC-CHHHH-HH
Confidence 35667776666643 3578889999999999999999999999543 3444444567885211111 11111 12
Q ss_pred HHHhcCCCCCeEEEEeCc-chHHHHHHcCCcc
Q psy7233 170 YLKKHLDPKKKAYIVGSS-GIADELNLAGIEN 200 (383)
Q Consensus 170 ~l~~~~~~~~~~~~ig~~-~l~~~l~~~gi~~ 200 (383)
.+++.-..++.+.++|.. .-...+...++-+
T Consensus 500 ~v~~lq~~g~~VamvGDG~NDapAL~~AdvGi 531 (675)
T TIGR01497 500 LIRQEQAEGKLVAMTGDGTNDAPALAQADVGV 531 (675)
T ss_pred HHHHHHHcCCeEEEECCCcchHHHHHhCCEeE
Confidence 222210134467777753 3344555554443
No 298
>KOG0207|consensus
Probab=48.95 E-value=81 Score=34.98 Aligned_cols=104 Identities=19% Similarity=0.191 Sum_probs=63.3
Q ss_pred cCCCEEEEecCCceec----CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHH
Q psy7233 93 NSFDTVLTDCDGVLWL----ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAA 168 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d----~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~ 168 (383)
+..-++.+=+||+|.- .+++-|+|..+++.|++.|++++++||.- .......-+++|++.-..++..... .
T Consensus 701 ~g~tvv~v~vn~~l~gv~~l~D~vr~~a~~av~~Lk~~Gi~v~mLTGDn---~~aA~svA~~VGi~~V~aev~P~~K--~ 775 (951)
T KOG0207|consen 701 KGQTVVYVAVNGQLVGVFALEDQVRPDAALAVAELKSMGIKVVMLTGDN---DAAARSVAQQVGIDNVYAEVLPEQK--A 775 (951)
T ss_pred cCceEEEEEECCEEEEEEEeccccchhHHHHHHHHHhcCceEEEEcCCC---HHHHHHHHHhhCcceEEeccCchhh--H
Confidence 3566889999999864 47888999999999999999999999943 3333344445786543334433222 2
Q ss_pred HHHHhcCCCCCeEEEEeCc---chHHHHHHcCCccc
Q psy7233 169 QYLKKHLDPKKKAYIVGSS---GIADELNLAGIENF 201 (383)
Q Consensus 169 ~~l~~~~~~~~~~~~ig~~---~l~~~l~~~gi~~~ 201 (383)
+++++--..++.+.++|.. .-.-.....|+.+.
T Consensus 776 ~~Ik~lq~~~~~VaMVGDGINDaPALA~AdVGIaig 811 (951)
T KOG0207|consen 776 EKIKEIQKNGGPVAMVGDGINDAPALAQADVGIAIG 811 (951)
T ss_pred HHHHHHHhcCCcEEEEeCCCCccHHHHhhccceeec
Confidence 2333320123556666642 22233344566553
No 299
>PRK11590 hypothetical protein; Provisional
Probab=48.80 E-value=34 Score=30.84 Aligned_cols=40 Identities=8% Similarity=0.068 Sum_probs=28.1
Q ss_pred ccChhHHHHH-HHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCC
Q psy7233 111 ELISGADQVM-NSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153 (383)
Q Consensus 111 ~~~p~A~eal-~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~ 153 (383)
.++|++.+.+ +.++++|++++++||. ...-+...+..+|+
T Consensus 95 ~~~pga~e~L~~~l~~~G~~l~IvSas---~~~~~~~il~~l~~ 135 (211)
T PRK11590 95 TAFPVVQERLTTYLLSSDADVWLITGS---PQPLVEQVYFDTPW 135 (211)
T ss_pred cCCccHHHHHHHHHHhCCCEEEEEeCC---cHHHHHHHHHHccc
Confidence 4589999999 5678899999999993 22223334455664
No 300
>COG1011 Predicted hydrolase (HAD superfamily) [General function prediction only]
Probab=47.79 E-value=26 Score=31.40 Aligned_cols=52 Identities=19% Similarity=0.110 Sum_probs=39.3
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHH
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAY 165 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~ 165 (383)
.+.+|++.+.++.+++. .++.++||. ........+.++|+.-..+.++.+..
T Consensus 98 ~~~~~~~~~~L~~l~~~-~~l~ilTNg---~~~~~~~~l~~~gl~~~Fd~v~~s~~ 149 (229)
T COG1011 98 LPDYPEALEALKELGKK-YKLGILTNG---ARPHQERKLRQLGLLDYFDAVFISED 149 (229)
T ss_pred CccChhHHHHHHHHHhh-ccEEEEeCC---ChHHHHHHHHHcCChhhhheEEEecc
Confidence 46788899999999988 999999994 34445566778887666677776644
No 301
>TIGR01684 viral_ppase viral phosphatase. These proteins also include an N-terminal domain (ca. 125 aas) that is unique to this clade.
Probab=47.13 E-value=4.4 Score=38.98 Aligned_cols=58 Identities=5% Similarity=-0.058 Sum_probs=36.1
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHH
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKL 301 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~ 301 (383)
=+++.++|..|+++|.++ ++||+.+.... ..+...++..+|+.+.+.......||+|+
T Consensus 148 dPgV~EaL~~LkekGikLaIaTS~~Re~v~----~~L~~lGLd~YFdvIIs~Gdv~~~kp~~e 206 (301)
T TIGR01684 148 DPRIYDSLTELKKRGCILVLWSYGDRDHVV----ESMRKVKLDRYFDIIISGGHKAEEYSTMS 206 (301)
T ss_pred CHHHHHHHHHHHHCCCEEEEEECCCHHHHH----HHHHHcCCCcccCEEEECCccccCCCCcc
Confidence 377899999999999876 88877665432 12222233345555555444566676664
No 302
>COG0731 Fe-S oxidoreductases [Energy production and conversion]
Probab=46.96 E-value=35 Score=32.86 Aligned_cols=87 Identities=20% Similarity=0.237 Sum_probs=51.9
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcC-ceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHH
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLG-KKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLK 172 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~G-i~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~ 172 (383)
+++.|.|=++|= -.++|.-.+.++.+++.| ++++++||.+. +++.+.|. .+++++.+-++..+-.-
T Consensus 79 ~pd~vtis~~GE----PTLy~~L~elI~~~k~~g~~~tflvTNgsl---pdv~~~L~------~~dql~~sLdA~~~~~~ 145 (296)
T COG0731 79 EPDHVTISLSGE----PTLYPNLGELIEEIKKRGKKTTFLVTNGSL---PDVLEELK------LPDQLYVSLDAPDEKTF 145 (296)
T ss_pred CCCEEEEeCCCC----cccccCHHHHHHHHHhcCCceEEEEeCCCh---HHHHHHhc------cCCEEEEEeccCCHHHH
Confidence 456777776661 233577889999999999 79999999433 66666664 34566666555443333
Q ss_pred hcCCCCCeEEEEeCcchHHHHHH
Q psy7233 173 KHLDPKKKAYIVGSSGIADELNL 195 (383)
Q Consensus 173 ~~~~~~~~~~~ig~~~l~~~l~~ 195 (383)
+. .++...-...+.+.+.+..
T Consensus 146 ~~--InRP~~~~~~e~ile~L~~ 166 (296)
T COG0731 146 RR--INRPHKKDSWEKILEGLEI 166 (296)
T ss_pred HH--hcCCCCcchHHHHHHHHHH
Confidence 32 2222223344555544443
No 303
>PRK15108 biotin synthase; Provisional
Probab=46.75 E-value=2.3e+02 Score=27.82 Aligned_cols=40 Identities=20% Similarity=0.310 Sum_probs=29.6
Q ss_pred cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 112 LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 112 ~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.++...+.++.+++.++.+. +|+ +..+ .+..+.|++.|++
T Consensus 109 ~~e~i~~~i~~ik~~~i~v~-~s~-G~ls-~e~l~~LkeAGld 148 (345)
T PRK15108 109 DMPYLEQMVQGVKAMGLETC-MTL-GTLS-ESQAQRLANAGLD 148 (345)
T ss_pred hHHHHHHHHHHHHhCCCEEE-EeC-CcCC-HHHHHHHHHcCCC
Confidence 34677788888888887754 665 5566 6777889888887
No 304
>TIGR02244 HAD-IG-Ncltidse HAD superfamily (subfamily IG) hydrolase, 5'-nucleotidase. A TIGRFAMs model (TIGR01993) represents a (putative) family of _pyrimidine_ 5'-nucleotidases which are also subfamily I HAD's, which should not be confused with the current model.
Probab=45.80 E-value=23 Score=34.95 Aligned_cols=25 Identities=32% Similarity=0.414 Sum_probs=23.3
Q ss_pred cChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 112 LISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 112 ~~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
..|++.++|+++++.|+++.++||.
T Consensus 185 ~~pgl~elL~~Lr~~G~klfLvTNS 209 (343)
T TIGR02244 185 RDPKLPLFLSKLKEHGKKLFLLTNS 209 (343)
T ss_pred cchhHHHHHHHHHHCCCeEEEEeCC
Confidence 4799999999999999999999994
No 305
>cd06844 STAS Sulphate Transporter and Anti-Sigma factor antagonist domain found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors. The STAS (Sulphate Transporter and Anti-Sigma factor antagonist) domain is found in the C-terminal region of sulphate transporters as well as in bacterial and archaeal proteins involved in the regulation of sigma factors, like anti-anti-sigma factors and "stressosome" components. The sigma factor regulators are involved in protein-protein interaction which is regulated by phosphorylation.
Probab=45.00 E-value=69 Score=24.93 Aligned_cols=56 Identities=9% Similarity=0.135 Sum_probs=40.1
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..+.+++|+-|+=+-.......-.+..+.+++.|.++.++.- ..++.+.++..|+.
T Consensus 38 ~~~~vilDls~v~~iDssgl~~L~~l~~~~~~~g~~l~l~~~-----~~~v~~~l~~~gl~ 93 (100)
T cd06844 38 AGKTIVIDISALEFMDSSGTGVLLERSRLAEAVGGQFVLTGI-----SPAVRITLTESGLD 93 (100)
T ss_pred CCCEEEEECCCCcEEcHHHHHHHHHHHHHHHHcCCEEEEECC-----CHHHHHHHHHhCch
Confidence 478999999999654444445556677888889988877653 35667777777764
No 306
>TIGR01647 ATPase-IIIA_H plasma-membrane proton-efflux P-type ATPase. This model describes the plasma membrane proton efflux P-type ATPase found in plants, fungi, protozoa, slime molds and archaea. The best studied representative is from yeast.
Probab=44.83 E-value=23 Score=38.77 Aligned_cols=44 Identities=16% Similarity=0.243 Sum_probs=34.6
Q ss_pred cCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 108 LENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 108 d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
-.+++-|++.++++.+++.|+++.++|+....+...+++ ++|+.
T Consensus 439 l~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~IA~---~lGI~ 482 (755)
T TIGR01647 439 LFDPPRHDTKETIERARHLGVEVKMVTGDHLAIAKETAR---RLGLG 482 (755)
T ss_pred ccCCChhhHHHHHHHHHHCCCeEEEECCCCHHHHHHHHH---HcCCC
Confidence 346888999999999999999999999965555554444 56764
No 307
>PRK08238 hypothetical protein; Validated
Probab=43.94 E-value=46 Score=34.39 Aligned_cols=38 Identities=16% Similarity=0.239 Sum_probs=29.0
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCC
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGF 153 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~ 153 (383)
.|++.+.+++++++|++++++|+.. .......++.+|+
T Consensus 74 ~pga~e~L~~lk~~G~~v~LaTas~---~~~a~~i~~~lGl 111 (479)
T PRK08238 74 NEEVLDYLRAERAAGRKLVLATASD---ERLAQAVAAHLGL 111 (479)
T ss_pred ChhHHHHHHHHHHCCCEEEEEeCCC---HHHHHHHHHHcCC
Confidence 5899999999999999999999933 3333344556775
No 308
>COG0647 NagD Predicted sugar phosphatases of the HAD superfamily [Carbohydrate transport and metabolism]
Probab=43.82 E-value=1.1e+02 Score=29.12 Aligned_cols=92 Identities=13% Similarity=0.012 Sum_probs=50.9
Q ss_pred cCCCChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCc-cccCCCCHHHHHHHHHHcCC
Q psy7233 235 DSHISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREP-VVIGKPSKLIGSYLIEKYNL 312 (383)
Q Consensus 235 ~~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~-~~~gKP~p~~~~~al~~lgi 312 (383)
.....+++..+.++.|+++|+++ ++||+....+. .....+....+.+. ...--.+..+....+.+. .
T Consensus 21 ~G~~~ipga~e~l~~L~~~g~~~iflTNn~~~s~~----------~~~~~L~~~~~~~~~~~~i~TS~~at~~~l~~~-~ 89 (269)
T COG0647 21 RGNEAIPGAAEALKRLKAAGKPVIFLTNNSTRSRE----------VVAARLSSLGGVDVTPDDIVTSGDATADYLAKQ-K 89 (269)
T ss_pred eCCccCchHHHHHHHHHHcCCeEEEEeCCCCCCHH----------HHHHHHHhhcCCCCCHHHeecHHHHHHHHHHhh-C
Confidence 55567899999999999999886 77887665441 12233333122110 000001122222222221 2
Q ss_pred CCCcEEEEecCchhhHHHHHHcCCcEE
Q psy7233 313 NPERTLMIGDRGNTDIRLGYNNGFQTL 339 (383)
Q Consensus 313 ~p~e~l~IGDs~~~DI~~A~~aGl~tv 339 (383)
.+..|++||.. .+.+..+.+|+..+
T Consensus 90 ~~~kv~viG~~--~l~~~l~~~G~~~~ 114 (269)
T COG0647 90 PGKKVYVIGEE--GLKEELEGAGFELV 114 (269)
T ss_pred CCCEEEEECCc--chHHHHHhCCcEEe
Confidence 33788889865 45677888885443
No 309
>PLN02919 haloacid dehalogenase-like hydrolase family protein
Probab=43.57 E-value=34 Score=39.05 Aligned_cols=86 Identities=15% Similarity=0.163 Sum_probs=49.8
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC-CCcCcccchH--------HHHHHHHHhcCCC-CCeEE
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN-AEPNEIIGTA--------YLAAQYLKKHLDP-KKKAY 182 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~-i~~~~i~~s~--------~~~~~~l~~~~~~-~~~~~ 182 (383)
+||+.+.++.|+++|+++.++|| .....+...|+.+|+. ...+.++.+. ........+.++. ...++
T Consensus 163 ~pG~~elL~~Lk~~G~~l~IvSn---~~~~~~~~~L~~~gl~~~~Fd~iv~~~~~~~~KP~Pe~~~~a~~~lgv~p~e~v 239 (1057)
T PLN02919 163 FPGALELITQCKNKGLKVAVASS---ADRIKVDANLAAAGLPLSMFDAIVSADAFENLKPAPDIFLAAAKILGVPTSECV 239 (1057)
T ss_pred CccHHHHHHHHHhCCCeEEEEeC---CcHHHHHHHHHHcCCChhHCCEEEECcccccCCCCHHHHHHHHHHcCcCcccEE
Confidence 67888888999999999999999 3445555667777764 1223333221 1122222232232 33456
Q ss_pred EEeCc-chHHHHHHcCCccc
Q psy7233 183 IVGSS-GIADELNLAGIENF 201 (383)
Q Consensus 183 ~ig~~-~l~~~l~~~gi~~~ 201 (383)
++|.. .-.+..+..|++..
T Consensus 240 ~IgDs~~Di~AA~~aGm~~I 259 (1057)
T PLN02919 240 VIEDALAGVQAARAAGMRCI 259 (1057)
T ss_pred EEcCCHHHHHHHHHcCCEEE
Confidence 66653 33455566777654
No 310
>KOG3120|consensus
Probab=42.54 E-value=68 Score=29.71 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=26.3
Q ss_pred CCCCCcEEEEecCchhhHH-HHHHcCCcEEEEcCCCC
Q psy7233 311 NLNPERTLMIGDRGNTDIR-LGYNNGFQTLLVLTGDT 346 (383)
Q Consensus 311 gi~p~e~l~IGDs~~~DI~-~A~~aGl~tv~V~~G~~ 346 (383)
|+.-++.++|||+ .+|+= ..+..+.+.+....|+.
T Consensus 179 gv~yer~iYvGDG-~nD~CP~l~Lr~~D~ampRkgfp 214 (256)
T KOG3120|consen 179 GVRYERLIYVGDG-ANDFCPVLRLRACDVAMPRKGFP 214 (256)
T ss_pred CCceeeEEEEcCC-CCCcCcchhcccCceecccCCCc
Confidence 7888899999999 99984 34455666776677754
No 311
>PRK11133 serB phosphoserine phosphatase; Provisional
Probab=42.42 E-value=39 Score=32.94 Aligned_cols=39 Identities=21% Similarity=0.307 Sum_probs=28.6
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.||+.+.++.+++.|+++.++|+....-.+.+ ++.+|++
T Consensus 183 ~pGa~elL~~Lk~~G~~~aIvSgg~~~~~~~l---~~~Lgld 221 (322)
T PRK11133 183 MPGLTELVLKLQALGWKVAIASGGFTYFADYL---RDKLRLD 221 (322)
T ss_pred ChhHHHHHHHHHHcCCEEEEEECCcchhHHHH---HHHcCCC
Confidence 78899999999999999999999554333322 2346664
No 312
>PRK14607 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=41.74 E-value=1.3e+02 Score=31.46 Aligned_cols=57 Identities=12% Similarity=-0.011 Sum_probs=42.5
Q ss_pred EEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 99 iFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
.+|+.||=.|+...++-.--+.--+.+.|++|+.-.|++.-+...-...|..+|+++
T Consensus 268 ~~D~~gtggdg~~t~nist~~a~v~A~~G~~V~kHG~r~~ss~~Gsadvle~lGv~~ 324 (534)
T PRK14607 268 TVDTCGTGGDGFGTFNISTTSAFVVAAAGVPVAKHGNRAVSSKSGSADVLEALGVKL 324 (534)
T ss_pred ceEEccCCCCCCCccccHHHHHHHHHhCCCcEEEECCCCCCCCccHHHHHHHcCCCC
Confidence 689999988887655444334445567899999999877666666778888899876
No 313
>COG3785 Uncharacterized conserved protein [Function unknown]
Probab=41.12 E-value=16 Score=29.32 Aligned_cols=38 Identities=18% Similarity=0.083 Sum_probs=27.4
Q ss_pred HhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcC
Q psy7233 90 DFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLG 127 (383)
Q Consensus 90 ~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~G 127 (383)
..+-.|+||+||+|-.--++.+.+.....-++-++.+-
T Consensus 23 HrlfpfrGVV~DvDPeyanteew~~~ip~~~rp~rdqP 60 (116)
T COG3785 23 HRLFPFRGVVFDVDPEYANTEEWPDEIPVNIRPLRDQP 60 (116)
T ss_pred hhhcccceEEEecCcccccCccChhhccccccccccCC
Confidence 34557999999999998888877766655555555443
No 314
>KOG0206|consensus
Probab=40.41 E-value=1.1e+02 Score=35.20 Aligned_cols=27 Identities=26% Similarity=0.491 Sum_probs=23.4
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
+++-+|.++.+++|++.|+++.++|+.
T Consensus 650 DkLQdgVPetI~~L~~AGIKIWVLTGD 676 (1151)
T KOG0206|consen 650 DKLQDGVPETIAKLAQAGIKIWVLTGD 676 (1151)
T ss_pred chhccCchHHHHHHHHcCCEEEEEcCc
Confidence 456678889999999999999999993
No 315
>PF13433 Peripla_BP_5: Periplasmic binding protein domain; PDB: 1QNL_A 1QO0_A 1PEA_A.
Probab=40.25 E-value=3.2e+02 Score=27.25 Aligned_cols=64 Identities=22% Similarity=0.386 Sum_probs=32.4
Q ss_pred HHHcCceEEEEcCCCCCCHHHHHHHHHhcC-----------CCCCcCcccchH------HHHHHHHHhcCCCC-CeEEEE
Q psy7233 123 LKSLGKKIFYVTNNSTKTREQLIVKLKHLG-----------FNAEPNEIIGTA------YLAAQYLKKHLDPK-KKAYIV 184 (383)
Q Consensus 123 l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG-----------~~i~~~~i~~s~------~~~~~~l~~~~~~~-~~~~~i 184 (383)
+.+.|+.+++=+= ++-+++.++..+++.+ ++.+++-+++.+ ..+.+|+.++ .+ ++++++
T Consensus 64 i~~d~V~~ifGc~-TSasRKaVlPvvE~~~~LL~Yp~~YEG~E~S~nviYtGa~PNQ~~~pl~~~~~~~--~G~~r~~lv 140 (363)
T PF13433_consen 64 IREDGVRAIFGCY-TSASRKAVLPVVERHNALLFYPTQYEGFECSPNVIYTGAAPNQQLLPLIDYLLEN--FGAKRFYLV 140 (363)
T ss_dssp HHHS---EEEE---SHHHHHHHHHHHHHCT-EEEE-S--------TTEEE-S--GGGTHHHHHHHHHHH--S--SEEEEE
T ss_pred HHhCCccEEEecc-hhhhHHHHHHHHHhcCceEEeccccccccCCCceEEcCCCchhhHHHHHHHHHhc--cCCceEEEe
Confidence 3567777666554 5566777777776644 333444444332 3356677665 45 788888
Q ss_pred eCcch
Q psy7233 185 GSSGI 189 (383)
Q Consensus 185 g~~~l 189 (383)
|++-+
T Consensus 141 GSdYv 145 (363)
T PF13433_consen 141 GSDYV 145 (363)
T ss_dssp EESSH
T ss_pred cCCcc
Confidence 87644
No 316
>TIGR01545 YfhB_g-proteo haloacid dehalogenase superfamily, subfamily IF hydrolase, YfhB. The gene name comes from the E. coli gene. There is currently no information regarding the function of this gene.
Probab=40.08 E-value=32 Score=31.21 Aligned_cols=26 Identities=15% Similarity=0.212 Sum_probs=22.4
Q ss_pred ccChhHHHHHH-HHHHcCceEEEEcCC
Q psy7233 111 ELISGADQVMN-SLKSLGKKIFYVTNN 136 (383)
Q Consensus 111 ~~~p~A~eal~-~l~~~Gi~v~ivTn~ 136 (383)
.++|++.+.++ .++++|++++++||.
T Consensus 94 ~l~pga~e~L~~~l~~~G~~v~IvSas 120 (210)
T TIGR01545 94 TAFPLVAERLRQYLESSDADIWLITGS 120 (210)
T ss_pred CCCccHHHHHHHHHHhCCCEEEEEcCC
Confidence 45799999996 678899999999993
No 317
>KOG2469|consensus
Probab=39.82 E-value=15 Score=36.74 Aligned_cols=53 Identities=19% Similarity=0.081 Sum_probs=41.9
Q ss_pred cCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHH-HHcCCcEEEEcCCCCC
Q psy7233 295 IGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLG-YNNGFQTLLVLTGDTT 347 (383)
Q Consensus 295 ~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A-~~aGl~tv~V~~G~~~ 347 (383)
.+++++-....+++.++..-.++++|||+...||.-- +.-|+.|++|......
T Consensus 285 ~~~ySggs~~~~~~~l~~~g~diLy~gdHi~~dvl~skk~~~wrt~lv~peL~~ 338 (424)
T KOG2469|consen 285 GGVYSGGSLKTVETSMKVKGKDILYGGDHIWGDVLVSKKRRGWRTVLVAPELER 338 (424)
T ss_pred cccCCcchHHHHHHHhcccccceeecccceeeeEEecceecceEEEEEehhhhh
Confidence 4556667788888888888899999999999998654 5679999998765433
No 318
>PF06117 DUF957: Enterobacterial protein of unknown function (DUF957); InterPro: IPR009301 This family consists of several hypothetical proteins from Escherichia coli, Salmonella typhi, Shigella flexneri and Proteus vulgaris. The function of this family is unknown.
Probab=39.43 E-value=19 Score=26.20 Aligned_cols=30 Identities=13% Similarity=0.160 Sum_probs=23.4
Q ss_pred CEEEEecCCceecCCccChhHHHHHHHHHH
Q psy7233 96 DTVLTDCDGVLWLENELISGADQVMNSLKS 125 (383)
Q Consensus 96 kaViFDlDGTL~d~~~~~p~A~eal~~l~~ 125 (383)
-.++||-|+.-+|+.-++|....+.+.++.
T Consensus 25 s~iiFDNded~tdSa~llp~ie~a~~~~r~ 54 (65)
T PF06117_consen 25 SDIIFDNDEDKTDSAALLPAIEQARADVRP 54 (65)
T ss_pred CCeeecCCCcccchHHHHHHHHHHHHHHHH
Confidence 589999999999998777776666655543
No 319
>COG0263 ProB Glutamate 5-kinase [Amino acid transport and metabolism]
Probab=39.28 E-value=3.4e+02 Score=26.97 Aligned_cols=129 Identities=14% Similarity=0.197 Sum_probs=73.5
Q ss_pred cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhcCCCCCeEEEEeCcchH-
Q psy7233 112 LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKHLDPKKKAYIVGSSGIA- 190 (383)
Q Consensus 112 ~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~~~~~~~~~~ig~~~l~- 190 (383)
.+....+.+.+|++.|+.++++|.. .+..-+..+|++..+..+-..- ++. .+|...+.
T Consensus 29 ~l~~l~~~ia~L~~~G~eVilVSSG------AiaaG~~~Lg~~~rp~~l~~kQ--A~A-------------AVGQ~~Lm~ 87 (369)
T COG0263 29 KLEELVRQVAALHKAGHEVVLVSSG------AIAAGRTRLGLPKRPKTLAEKQ--AAA-------------AVGQVRLMQ 87 (369)
T ss_pred HHHHHHHHHHHHHhCCCEEEEEccc------hhhhChhhcCCCCCCcchHHHH--HHH-------------HhCHHHHHH
Confidence 3566778899999999999999972 3455566788887666543211 111 11222233
Q ss_pred ---HHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEe---ccCCCChhhHHHHHHHhhCCCCEEEEecCCC
Q psy7233 191 ---DELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVG---FDSHISFPKLMKAACYLTNPNTLFVATNTDE 264 (383)
Q Consensus 191 ---~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g---~~~~~~~~~l~~~l~~L~~~g~~~i~tn~d~ 264 (383)
+.|..+|+.+. .+++. +.....|...+.++..|.+.|+.=|+--+|.
T Consensus 88 ~y~~~f~~~g~~v~---------------------------QiLLTr~D~~~r~ry~Nar~Tl~~Ll~~gvVPIINENDt 140 (369)
T COG0263 88 LYEELFARYGIKVG---------------------------QILLTRDDFSDRRRYLNARNTLSALLELGVVPIINENDT 140 (369)
T ss_pred HHHHHHHhcCCeee---------------------------EEEeehhhhhhHHHHHHHHHHHHHHHHCCceeeecCCCc
Confidence 33444555443 12221 3445568888999999988887655533333
Q ss_pred CCCCCCCccccC-cchHHHHHHHhcCCC
Q psy7233 265 SFPMGPHVTVPG-TGSMVAAVKTGAQRE 291 (383)
Q Consensus 265 ~~~~~~~~~~~~-~~~l~~~~~~~~~~~ 291 (383)
... . . ..+| ...+...+....+.+
T Consensus 141 va~-~-E-ikfGDND~LsA~VA~lv~AD 165 (369)
T COG0263 141 VAT-E-E-IKFGDNDTLSALVAILVGAD 165 (369)
T ss_pred eee-e-e-eeecCCchHHHHHHHHhCCC
Confidence 332 2 2 3444 444555555544443
No 320
>TIGR01993 Pyr-5-nucltdase pyrimidine 5'-nucleotidase. These enzymes are members of the haloacid dehalogenase (HAD) superfamily of hydrolases, specifically the IA subfamily (variant 3, TIGR01509).
Probab=38.43 E-value=38 Score=29.50 Aligned_cols=48 Identities=17% Similarity=0.108 Sum_probs=33.7
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
.++.+++.++|+.|+ .++.++||+ +.......++.+|+.-..+.++++
T Consensus 83 ~~~~~g~~~~L~~L~---~~~~i~Tn~---~~~~~~~~l~~~gl~~~fd~i~~~ 130 (184)
T TIGR01993 83 LKPDPELRNLLLRLP---GRKIIFTNG---DRAHARRALNRLGIEDCFDGIFCF 130 (184)
T ss_pred CCCCHHHHHHHHhCC---CCEEEEeCC---CHHHHHHHHHHcCcHhhhCeEEEe
Confidence 357899999999987 468999994 445566677778875434455543
No 321
>TIGR01517 ATPase-IIB_Ca plasma-membrane calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIB based on a phylogenetic analysis which distinguishes this group from the Type IIA SERCA calcium pump. A separate analysis divides Type IIA into sub-types (SERCA and PMR1), which are modelled by the corresponding TIGR01116 and TIGR01522. This model is well separated from the two others.
Probab=36.59 E-value=39 Score=38.01 Aligned_cols=48 Identities=19% Similarity=0.318 Sum_probs=36.1
Q ss_pred CceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 104 GVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 104 GTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
|.+.-.+++-|++.++++++++.|++++++|+....+...+++ ++|+.
T Consensus 572 Gli~~~Dplr~~~~~aI~~l~~aGI~v~miTGD~~~tA~~iA~---~~GI~ 619 (941)
T TIGR01517 572 GVVGIKDPLRPGVREAVQECQRAGITVRMVTGDNIDTAKAIAR---NCGIL 619 (941)
T ss_pred EEeeccCCCchhHHHHHHHHHHCCCEEEEECCCChHHHHHHHH---HcCCC
Confidence 3333356788999999999999999999999966555555444 46764
No 322
>COG1366 SpoIIAA Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) [Signal transduction mechanisms]
Probab=36.40 E-value=1.1e+02 Score=24.73 Aligned_cols=56 Identities=14% Similarity=0.231 Sum_probs=40.1
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
..+.+++|+.||=+-+....---..+++.++..|...+++.. .+++++.+...|++
T Consensus 43 ~~~~ivIDls~v~~~dS~gl~~L~~~~~~~~~~g~~~~l~~i-----~p~v~~~~~~~gl~ 98 (117)
T COG1366 43 GARGLVIDLSGVDFMDSAGLGVLVALLKSARLRGVELVLVGI-----QPEVARTLELTGLD 98 (117)
T ss_pred CCcEEEEECCCCceechHHHHHHHHHHHHHHhcCCeEEEEeC-----CHHHHHHHHHhCch
Confidence 356699999999654444444455677888999988777665 35677777778876
No 323
>TIGR01524 ATPase-IIIB_Mg magnesium-translocating P-type ATPase. The magnesium ATPases have been classified as type IIIB by a phylogenetic analysis.
Probab=36.24 E-value=37 Score=37.82 Aligned_cols=43 Identities=9% Similarity=0.194 Sum_probs=33.6
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+++-|++.++++.+++.|++++++|+....+...+ -+++|+.
T Consensus 513 ~Dp~R~~~~~aI~~l~~aGI~vvmiTGD~~~tA~aI---A~~lGI~ 555 (867)
T TIGR01524 513 LDPPKESTKEAIAALFKNGINVKVLTGDNEIVTARI---CQEVGID 555 (867)
T ss_pred eCCCchhHHHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHHcCCC
Confidence 467889999999999999999999999554444444 3456774
No 324
>KOG3085|consensus
Probab=36.02 E-value=85 Score=29.29 Aligned_cols=66 Identities=17% Similarity=0.198 Sum_probs=42.6
Q ss_pred CCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHH
Q psy7233 94 SFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAY 165 (383)
Q Consensus 94 ~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~ 165 (383)
.+..-.||--+ --.....++..++++++|+.|..+.++||.-.+ +...+..+|+..-.|.++.|..
T Consensus 98 ~~~~~~~s~~~--~~~~~~~~~~~~~lq~lR~~g~~l~iisN~d~r----~~~~l~~~~l~~~fD~vv~S~e 163 (237)
T KOG3085|consen 98 NFSFRLFSTFA--PSAWKYLDGMQELLQKLRKKGTILGIISNFDDR----LRLLLLPLGLSAYFDFVVESCE 163 (237)
T ss_pred hhhhheecccc--ccCceeccHHHHHHHHHHhCCeEEEEecCCcHH----HHHHhhccCHHHhhhhhhhhhh
Confidence 34455666655 222455678889999999999888999984433 2244555776655566665543
No 325
>PRK14129 heat shock protein HspQ; Provisional
Probab=35.60 E-value=25 Score=28.31 Aligned_cols=43 Identities=16% Similarity=0.066 Sum_probs=25.1
Q ss_pred hcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcC
Q psy7233 92 LNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTN 135 (383)
Q Consensus 92 ~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn 135 (383)
+-.|+||+||+|-+--.+++.+....+. +.++.+-.--+++-|
T Consensus 16 l~~yrGVV~DVDP~fs~~e~w~~~ia~~-~p~kdqPwYHvl~en 58 (105)
T PRK14129 16 LLGYLGVVVDIDPEYSLEEPSPDELAVN-DELRAAPWYHVVMED 58 (105)
T ss_pred ecCCCeEEEeeCCCcCCCchhHHhhccC-CCccCCCceEEEEEc
Confidence 4479999999999876666555443332 333333333344444
No 326
>PRK15122 magnesium-transporting ATPase; Provisional
Probab=35.49 E-value=36 Score=38.16 Aligned_cols=43 Identities=12% Similarity=0.240 Sum_probs=33.7
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+++-|++.++++.+++.|++++++|+....+...++ +++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~aIA---~~lGI~ 590 (903)
T PRK15122 548 LDPPKESAAPAIAALRENGVAVKVLTGDNPIVTAKIC---REVGLE 590 (903)
T ss_pred cCccHHHHHHHHHHHHHCCCeEEEECCCCHHHHHHHH---HHcCCC
Confidence 4678899999999999999999999996544444444 456774
No 327
>PRK10725 fructose-1-P/6-phosphogluconate phosphatase; Provisional
Probab=35.23 E-value=58 Score=28.22 Aligned_cols=50 Identities=14% Similarity=0.127 Sum_probs=33.8
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccch
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGT 163 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s 163 (383)
...++|+ .+.+..+++. ++..++|| .+.......|+.+|+.--.+.++++
T Consensus 86 ~~~~~~~-~e~L~~L~~~-~~l~I~T~---~~~~~~~~~l~~~~l~~~fd~i~~~ 135 (188)
T PRK10725 86 SVEPLPL-IEVVKAWHGR-RPMAVGTG---SESAIAEALLAHLGLRRYFDAVVAA 135 (188)
T ss_pred cCCCccH-HHHHHHHHhC-CCEEEEcC---CchHHHHHHHHhCCcHhHceEEEeh
Confidence 3345675 5889998765 89999999 3445556667778876444555554
No 328
>TIGR01245 trpD anthranilate phosphoribosyltransferase. In many widely different species, including E. coli, Thermotoga maritima, and Archaeoglobus fulgidus, this enzymatic domain (anthranilate phosphoribosyltransferase) is found C-terminal to glutamine amidotransferase; the fusion protein is designated anthranilate synthase component II (EC 4.1.3.27)
Probab=35.17 E-value=1.8e+02 Score=28.34 Aligned_cols=57 Identities=21% Similarity=0.089 Sum_probs=40.1
Q ss_pred EEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 99 iFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
++|+.||=.|+...++-..-+.--+.+.|++|+.-.|++.-+...-.+.|..+|+++
T Consensus 71 ~iD~~gtggdg~~t~nist~~a~vlA~~G~~V~kHG~r~~~s~~Gs~d~le~LGi~~ 127 (330)
T TIGR01245 71 LVDIVGTGGDGANTINISTASAFVAAAAGVKVAKHGNRSVSSKSGSADVLEALGVNL 127 (330)
T ss_pred cccccCCCCCCCCccccHHHHHHHHHhCCCEEEEeCCCCCCCCccHHHHHHHcCCCC
Confidence 578888876776555443333445667899999988876555555677888899985
No 329
>PRK00188 trpD anthranilate phosphoribosyltransferase; Provisional
Probab=33.66 E-value=2.3e+02 Score=27.80 Aligned_cols=71 Identities=17% Similarity=0.066 Sum_probs=46.8
Q ss_pred EEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhc
Q psy7233 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKH 174 (383)
Q Consensus 99 iFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~ 174 (383)
.+|+.||=.|+...++-..-+.--+.+.|++|+.-.|++.-+.......|..+|+++.. +...+.+.+.+.
T Consensus 75 ~iDi~gtggdg~~t~nis~~~a~vlA~~G~~V~kHG~~~~~s~~GsadvLe~lGi~~~~-----~~~~~~~~l~~~ 145 (339)
T PRK00188 75 AVDIVGTGGDGANTFNISTAAAFVAAAAGVKVAKHGNRSVSSKSGSADVLEALGVNLDL-----SPEQVARCLEEV 145 (339)
T ss_pred CCcccCCCCCCCCccchHHHHHHHHHhCCCEEEEECCCCCCCCcCHHHHHHHcCCCCCC-----CHHHHHHHHHHc
Confidence 57888887777665554434444566789999998887766665667788889997632 333344555543
No 330
>PRK10517 magnesium-transporting ATPase MgtA; Provisional
Probab=33.59 E-value=36 Score=38.10 Aligned_cols=43 Identities=14% Similarity=0.238 Sum_probs=33.5
Q ss_pred CCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 109 ENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 109 ~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+++-|++.++++.+++.|+++.++|+....+...+ -+++|+.
T Consensus 548 ~Dp~R~~a~~aI~~l~~aGI~v~miTGD~~~tA~~I---A~~lGI~ 590 (902)
T PRK10517 548 LDPPKETTAPALKALKASGVTVKILTGDSELVAAKV---CHEVGLD 590 (902)
T ss_pred hCcchhhHHHHHHHHHHCCCEEEEEcCCCHHHHHHH---HHHcCCC
Confidence 367789999999999999999999999554444444 4456774
No 331
>PF12694 MoCo_carrier: Putative molybdenum carrier; InterPro: IPR024755 The structure of proteins in this family contain central beta strands with flanking alpha helices. The structure is similar to that of a molybdenum cofactor carrier protein.; PDB: 3IMK_A.
Probab=33.44 E-value=37 Score=29.08 Aligned_cols=35 Identities=26% Similarity=0.433 Sum_probs=25.1
Q ss_pred EEecCCceecC-CccChhHHHHHHHHHHcCceEEEE
Q psy7233 99 LTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYV 133 (383)
Q Consensus 99 iFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~iv 133 (383)
+-|-||||+-. ..+--|+.-.++..++.++|+.++
T Consensus 61 V~DsDgTlI~~~g~l~GGt~lT~~~a~~~~KP~l~i 96 (145)
T PF12694_consen 61 VRDSDGTLIFTRGELTGGTALTVEFARKHGKPCLHI 96 (145)
T ss_dssp HHTSSEEEEEESSS--HHHHHHHHHHHHTT--EEEE
T ss_pred hhhcCeEEEEecCCCCcHHHHHHHHHHHhCCCEEEE
Confidence 35889998765 455668888889999999999888
No 332
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=33.27 E-value=2.7e+02 Score=29.23 Aligned_cols=81 Identities=17% Similarity=0.102 Sum_probs=50.1
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccc-cCCCCHHHHHHHHHHcCCCCC
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVV-IGKPSKLIGSYLIEKYNLNPE 315 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~-~gKP~p~~~~~al~~lgi~p~ 315 (383)
.--+++.+-+..|++.|++- .+|. |.... +..+..-.|.+... -.| |+-=..+.++-.-.-.
T Consensus 447 ivK~Gi~ERf~elR~MgIkTvM~TG-DN~~T-------------Aa~IA~EAGVDdfiAeat--PEdK~~~I~~eQ~~gr 510 (681)
T COG2216 447 IVKPGIKERFAELRKMGIKTVMITG-DNPLT-------------AAAIAAEAGVDDFIAEAT--PEDKLALIRQEQAEGR 510 (681)
T ss_pred hcchhHHHHHHHHHhcCCeEEEEeC-CCHHH-------------HHHHHHHhCchhhhhcCC--hHHHHHHHHHHHhcCc
Confidence 34588999999999999985 4454 32211 12233333333222 234 3334445555544456
Q ss_pred cEEEEecCchhhHHHHHHcC
Q psy7233 316 RTLMIGDRGNTDIRLGYNNG 335 (383)
Q Consensus 316 e~l~IGDs~~~DI~~A~~aG 335 (383)
=+-|.||. .||-.+..+|.
T Consensus 511 lVAMtGDG-TNDAPALAqAd 529 (681)
T COG2216 511 LVAMTGDG-TNDAPALAQAD 529 (681)
T ss_pred EEEEcCCC-CCcchhhhhcc
Confidence 68999999 99999888887
No 333
>TIGR01494 ATPase_P-type ATPase, P-type (transporting), HAD superfamily, subfamily IC. The crystal structure of one calcium-pumping ATPase and an analysis of the fold of the catalytic domain of the P-type ATPases have been published. These reveal that the catalytic core of these enzymes is a haloacid dehalogenase(HAD)-type aspartate-nucleophile hydrolase. The location of the ATP-binding loop in between the first and second HAD conserved catalytic motifs defines these enzymes as members of subfamily I of the HAD superfamily (see also TIGR01493, TIGR01509, TIGR01549, TIGR01544 and TIGR01545). Based on these classifications, the P-type ATPase _superfamily_ corresponds to the IC subfamily of the HAD superfamily.
Probab=32.54 E-value=48 Score=34.20 Aligned_cols=54 Identities=17% Similarity=0.303 Sum_probs=39.0
Q ss_pred CCCEEEEecCCc----eecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHH
Q psy7233 94 SFDTVLTDCDGV----LWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVK 147 (383)
Q Consensus 94 ~~kaViFDlDGT----L~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~ 147 (383)
.++.+.+=.+++ +.-.+++.+++.++++.+++.|+.++++|+....+...+++.
T Consensus 326 g~~~~~~a~~~~~~g~i~l~d~lr~~~~~~i~~l~~~gi~~~~ltGD~~~~a~~ia~~ 383 (499)
T TIGR01494 326 GLRVLAVASKETLLGLLGLEDPLRDDAKETISELREAGIRVIMLTGDNVLTAKAIAKE 383 (499)
T ss_pred CCEEEEEEECCeEEEEEEecCCCchhHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHH
Confidence 355666645554 444678899999999999999999999999654444444443
No 334
>TIGR01116 ATPase-IIA1_Ca sarco/endoplasmic reticulum calcium-translocating P-type ATPase. The calcium P-type ATPases have been characterized as Type IIA based on a phylogenetic analysis which distinguishes this group from the Type IIB PMCA calcium pump modelled by TIGR01517. A separate analysis divides Type IIA into sub-types, SERCA and PMR1, the latter of which is modelled by TIGR01522.
Probab=32.19 E-value=1e+02 Score=34.64 Aligned_cols=42 Identities=10% Similarity=0.256 Sum_probs=32.8
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
+++.+++.++++++++.|++++++|+.. ........+++|+.
T Consensus 536 Dplr~~v~e~I~~l~~aGI~v~miTGD~---~~tA~~ia~~~gi~ 577 (917)
T TIGR01116 536 DPPRPEVADAIEKCRTAGIRVIMITGDN---KETAEAICRRIGIF 577 (917)
T ss_pred CCCchhHHHHHHHHHHCCCEEEEecCCC---HHHHHHHHHHcCCC
Confidence 5778999999999999999999999953 44444445556764
No 335
>smart00775 LNS2 LNS2 domain. This domain is found in Saccharomyces cerevisiae protein SMP2, proteins with an N-terminal lipin domain and phosphatidylinositol transfer proteins. SMP2 is involved in plasmid maintenance and respiration. Lipin proteins are involved in adipose tissue development and insulin resistance.
Probab=30.88 E-value=2.7e+02 Score=23.82 Aligned_cols=20 Identities=25% Similarity=0.200 Sum_probs=17.4
Q ss_pred EEEecCchhhHHHHHHcCCcE
Q psy7233 318 LMIGDRGNTDIRLGYNNGFQT 338 (383)
Q Consensus 318 l~IGDs~~~DI~~A~~aGl~t 338 (383)
..+||+ .+|+.+=+++|+..
T Consensus 123 ~~~gn~-~~D~~~y~~~gi~~ 142 (157)
T smart00775 123 AGFGNR-ITDVISYSAVGIPP 142 (157)
T ss_pred EEeCCC-chhHHHHHHcCCCh
Confidence 458888 99999999999964
No 336
>COG2897 SseA Rhodanese-related sulfurtransferase [Inorganic ion transport and metabolism]
Probab=30.81 E-value=91 Score=29.93 Aligned_cols=48 Identities=17% Similarity=0.187 Sum_probs=40.3
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHH------HcCCcEEEEcCC
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGY------NNGFQTLLVLTG 344 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~------~aGl~tv~V~~G 344 (383)
-=|+|+.|...++.+||+.++++++=|+ .+..-+++ .+|..-|.|..|
T Consensus 71 ~lp~~e~fa~~~~~~GI~~d~tVVvYdd-~~~~~A~ra~W~l~~~Gh~~V~iLdG 124 (285)
T COG2897 71 MLPSPEQFAKLLGELGIRNDDTVVVYDD-GGGFFAARAWWLLRYLGHENVRILDG 124 (285)
T ss_pred CCCCHHHHHHHHHHcCCCCCCEEEEECC-CCCeehHHHHHHHHHcCCCceEEecC
Confidence 4588999999999999999999999887 55565554 569999999887
No 337
>PF00532 Peripla_BP_1: Periplasmic binding proteins and sugar binding domain of LacI family; InterPro: IPR001761 This family includes the periplasmic binding proteins, and the LacI family transcriptional regulators. The periplasmic binding proteins are the primary receptors for chemotaxis and transport of many sugar based solutes. The LacI family of proteins consist of transcriptional regulators related to the lac repressor. In this case, generally the sugar binding domain binds a sugar which changes the DNA binding activity of the repressor domain (lacI) [, ].; PDB: 1BAP_A 7ABP_A 6ABP_A 1ABF_A 5ABP_A 2WRZ_B 9ABP_A 1APB_A 1ABE_A 8ABP_A ....
Probab=30.52 E-value=3e+02 Score=25.84 Aligned_cols=70 Identities=23% Similarity=0.361 Sum_probs=37.8
Q ss_pred HHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC-CCcCcccchHHHHHHHHHhcCCCCC-eEEEEeCc--------
Q psy7233 118 QVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN-AEPNEIIGTAYLAAQYLKKHLDPKK-KAYIVGSS-------- 187 (383)
Q Consensus 118 eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~-i~~~~i~~s~~~~~~~l~~~~~~~~-~~~~ig~~-------- 187 (383)
+.+..+.+.|+|++++....... .+++ +..|+. ..+..+.++|.+. ++.+ ..+.-|..
T Consensus 70 ~~l~~~~~~~iPvV~~~~~~~~~----------~~~~~V~~D~~-~a~~~a~~~Li~~-Gh~~~I~~i~~~~~~~~~~~R 137 (279)
T PF00532_consen 70 EELRRLIKSGIPVVLIDRYIDNP----------EGVPSVYIDNY-EAGYEATEYLIKK-GHRRPIAFIGGPEDSSTSRER 137 (279)
T ss_dssp HHHHHHHHTTSEEEEESS-SCTT----------CTSCEEEEEHH-HHHHHHHHHHHHT-TCCSTEEEEEESTTTHHHHHH
T ss_pred HHHHHHHHcCCCEEEEEeccCCc----------ccCCEEEEcch-HHHHHHHHHHHhc-ccCCeEEEEecCcchHHHHHH
Confidence 45666667799988888732211 2333 222322 3445567777776 6765 44544443
Q ss_pred --chHHHHHHcCCc
Q psy7233 188 --GIADELNLAGIE 199 (383)
Q Consensus 188 --~l~~~l~~~gi~ 199 (383)
++.+.+.+.|++
T Consensus 138 ~~Gy~~Al~~~Gl~ 151 (279)
T PF00532_consen 138 LQGYRDALKEAGLP 151 (279)
T ss_dssp HHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHcCCC
Confidence 334555556653
No 338
>PRK10563 6-phosphogluconate phosphatase; Provisional
Probab=30.48 E-value=70 Score=28.64 Aligned_cols=40 Identities=23% Similarity=0.306 Sum_probs=30.1
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
..++|++.++++.| ++++.++||. +...+...|+.+|+.-
T Consensus 87 ~~~~~gv~~~L~~L---~~~~~ivTn~---~~~~~~~~l~~~~l~~ 126 (221)
T PRK10563 87 LEPIAGANALLESI---TVPMCVVSNG---PVSKMQHSLGKTGMLH 126 (221)
T ss_pred CCcCCCHHHHHHHc---CCCEEEEeCC---cHHHHHHHHHhcChHH
Confidence 56789999999988 4899999993 3445556677777753
No 339
>PRK12360 4-hydroxy-3-methylbut-2-enyl diphosphate reductase; Provisional
Probab=29.93 E-value=1.7e+02 Score=28.06 Aligned_cols=111 Identities=14% Similarity=0.044 Sum_probs=62.9
Q ss_pred EEEeccCCCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCC--CHHHHHHHH
Q psy7233 230 VVVGFDSHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKP--SKLIGSYLI 307 (383)
Q Consensus 230 Vv~g~~~~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP--~p~~~~~al 307 (383)
+.+-.....+..+..++...|+++...+.+.| ..+..... .. .-+..+..-.+..-+.-||- +..-+..++
T Consensus 159 v~~vsQTT~~~~~~~~iv~~l~~~~~~~~v~~--TIC~aT~~-RQ----~a~~~La~~vD~miVVGg~~SsNT~rL~eia 231 (281)
T PRK12360 159 ACVVAQTTIIPELWEDILNVIKLKSKELVFFN--TICSATKK-RQ----ESAKELSKEVDVMIVIGGKHSSNTQKLVKIC 231 (281)
T ss_pred EEEEECCCCcHHHHHHHHHHHHHhCcccccCC--Ccchhhhh-HH----HHHHHHHHhCCEEEEecCCCCccHHHHHHHH
Confidence 33435777777888888888887554443322 12221111 00 01122222222221223433 334455567
Q ss_pred HHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHH
Q psy7233 308 EKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAI 352 (383)
Q Consensus 308 ~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~ 352 (383)
+..| .++.+|++. .|+..---.|..+|+|+.|.+.|+.+.
T Consensus 232 ~~~~---~~t~~Ie~~--~el~~~~~~~~~~VGitaGASTP~~li 271 (281)
T PRK12360 232 EKNC---PNTFHIETA--DELDLEMLKDYKIIGITAGASTPDWII 271 (281)
T ss_pred HHHC---CCEEEECCh--HHCCHHHhCCCCEEEEEccCCCCHHHH
Confidence 7666 468999886 578777778899999999988877654
No 340
>PF07075 DUF1343: Protein of unknown function (DUF1343); InterPro: IPR008302 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=29.16 E-value=68 Score=31.94 Aligned_cols=46 Identities=22% Similarity=0.192 Sum_probs=33.9
Q ss_pred HHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEc
Q psy7233 89 KDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVT 134 (383)
Q Consensus 89 ~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivT 134 (383)
.++++.+|+++||+..+=.+.=.-+.--..+|+++.+.|++++++=
T Consensus 73 ~~mL~~vDvlvfDiQDvG~R~YTYi~Tl~~~MeAaa~~g~~vvVLD 118 (365)
T PF07075_consen 73 PEMLKGVDVLVFDIQDVGVRFYTYISTLYYVMEAAAENGKPVVVLD 118 (365)
T ss_pred HHHHhCCCEEEEeCccCCchHHHHHHHHHHHHHHHHHhCCeEEEEe
Confidence 4678899999999998633332333344567888899999988875
No 341
>KOG1615|consensus
Probab=28.83 E-value=1.2e+02 Score=27.53 Aligned_cols=23 Identities=13% Similarity=0.522 Sum_probs=21.1
Q ss_pred ChhHHHHHHHHHHcCceEEEEcC
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTN 135 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn 135 (383)
.||+++....|+++|.+++++|+
T Consensus 90 T~Gi~eLv~~L~~~~~~v~liSG 112 (227)
T KOG1615|consen 90 TPGIRELVSRLHARGTQVYLISG 112 (227)
T ss_pred CCCHHHHHHHHHHcCCeEEEEcC
Confidence 68899999999999999999998
No 342
>PLN02389 biotin synthase
Probab=28.78 E-value=4.5e+02 Score=26.26 Aligned_cols=41 Identities=15% Similarity=0.256 Sum_probs=28.1
Q ss_pred cChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 112 LISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 112 ~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
.++...+.++.+++.++.+. +|+ + ....+..+.|++.|++.
T Consensus 151 ~~e~i~eiir~ik~~~l~i~-~s~-G-~l~~E~l~~LkeAGld~ 191 (379)
T PLN02389 151 NFNQILEYVKEIRGMGMEVC-CTL-G-MLEKEQAAQLKEAGLTA 191 (379)
T ss_pred HHHHHHHHHHHHhcCCcEEE-ECC-C-CCCHHHHHHHHHcCCCE
Confidence 36778888888887776643 343 3 34556777888888873
No 343
>PF06941 NT5C: 5' nucleotidase, deoxy (Pyrimidine), cytosolic type C protein (NT5C); InterPro: IPR010708 This family consists of several 5' nucleotidase, deoxy (Pyrimidine), and cytosolic type C (NT5C) proteins. 5'(3')-deoxyribonucleotidase is a ubiquitous enzyme in mammalian cells whose physiological function is not known [].; GO: 0016791 phosphatase activity; PDB: 1Z4M_A 1Q92_A 1Q91_A 1Z4J_A 1Z4I_A 1Z4Q_A 1Z4K_A 2JAW_A 1MH9_A 1Z4L_A ....
Probab=28.64 E-value=88 Score=27.60 Aligned_cols=114 Identities=11% Similarity=0.091 Sum_probs=56.6
Q ss_pred cCCCChhhHHHHHHHhhCCC-CEEEEecCCCCCCCCCCccccCcch-HHHHHHHhcCCCccccCCCCHHHHHHHHHHcCC
Q psy7233 235 DSHISFPKLMKAACYLTNPN-TLFVATNTDESFPMGPHVTVPGTGS-MVAAVKTGAQREPVVIGKPSKLIGSYLIEKYNL 312 (383)
Q Consensus 235 ~~~~~~~~l~~~l~~L~~~g-~~~i~tn~d~~~~~~~~~~~~~~~~-l~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi 312 (383)
....++++..+++..|.+.| ..+++|......+.. . ...... +.+.|....... ....+.+. .++.
T Consensus 70 ~~l~p~~gA~e~l~~L~~~g~~~~~Itar~~~~~~~-~--~~~k~~Wl~~hf~~i~~~~-~~~~~~K~--------~v~~ 137 (191)
T PF06941_consen 70 SNLPPIPGAVEALKKLRDKGHEIVIITARPPEFPDH-S--AEEKREWLERHFPFIPYDN-LIFTGDKT--------LVGG 137 (191)
T ss_dssp TT--B-TTHHHHHHHHHTSTTEEEEEEE-SSSSGCC-C--HHHHHHHHHHHHTHHHHCC-EEEESSGG--------GC--
T ss_pred cCCCccHHHHHHHHHHHHcCCcEEEEEecCccccch-H--HHHHHHHHHHHcCCCchhe-EEEecCCC--------eEec
Confidence 34455788999999999988 455555543332210 0 001111 122222222111 22222111 1222
Q ss_pred CCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 313 NPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 313 ~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
+ ++|.|++.+ +..+.++|+.+|+......... ..-.-+.|..|+.+++
T Consensus 138 ---D-vlIDD~~~n-~~~~~~~g~~~iLfd~p~Nr~~----------------~~~~Rv~~W~ei~~~i 185 (191)
T PF06941_consen 138 ---D-VLIDDRPHN-LEQFANAGIPVILFDQPYNRDE----------------SNFPRVNNWEEIEDLI 185 (191)
T ss_dssp ---S-EEEESSSHH-HSS-SSESSEEEEE--GGGTT------------------TSEEE-STTSHHHHH
T ss_pred ---c-EEecCChHH-HHhccCCCceEEEEcCCCCCCC----------------CCCccCCCHHHHHHHH
Confidence 2 899999555 9999999999999866433211 1245688888887655
No 344
>cd00733 GlyRS_alpha_core Class II Glycyl-tRNA synthetase (GlyRS) alpha subunit core catalytic domain. GlyRS functions as a homodimer in eukaryotes, archaea and some bacteria and as a heterotetramer in the remainder of prokaryotes and in arabidopsis. It is responsible for the attachment of glycine to the 3' OH group of ribose of the appropriate tRNA. This domain is primarily responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. This alignment contains only sequences from the GlyRS form which heterotetramerizes. The homodimer form of GlyRS is in a different family of class II aaRS. Class II assignment is based upon structure and the presence of three characteristic sequence motifs.
Probab=28.19 E-value=58 Score=30.58 Aligned_cols=44 Identities=20% Similarity=0.252 Sum_probs=35.5
Q ss_pred cCCCCH----HHHHHHHHHcCCCCC--cEEEEecCchhhHHHHHHcCCcE
Q psy7233 295 IGKPSK----LIGSYLIEKYNLNPE--RTLMIGDRGNTDIRLGYNNGFQT 338 (383)
Q Consensus 295 ~gKP~p----~~~~~al~~lgi~p~--e~l~IGDs~~~DI~~A~~aGl~t 338 (383)
.-||+| +.|+.-++.+|++|. ++-+|+|+..+--.||--.|+..
T Consensus 79 iiKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGLGWEV 128 (279)
T cd00733 79 IIKPSPDNIQELYLESLEALGINPKEHDIRFVEDNWESPTLGAWGLGWEV 128 (279)
T ss_pred EECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE
Confidence 458887 457778999999865 69999999999888988887543
No 345
>PRK06256 biotin synthase; Validated
Probab=28.12 E-value=5.5e+02 Score=24.73 Aligned_cols=30 Identities=17% Similarity=0.257 Sum_probs=19.9
Q ss_pred EEEeccCCCChhhHHHHHHHhhCCCCEEEEec
Q psy7233 230 VVVGFDSHISFPKLMKAACYLTNPNTLFVATN 261 (383)
Q Consensus 230 Vv~g~~~~~~~~~l~~~l~~L~~~g~~~i~tn 261 (383)
+++|. ..++.+..+.+..+++-+...+..|
T Consensus 207 ~I~Gl--gEt~ed~~~~~~~l~~l~~~~v~i~ 236 (336)
T PRK06256 207 GIIGM--GESLEDRVEHAFFLKELDADSIPIN 236 (336)
T ss_pred eEEeC--CCCHHHHHHHHHHHHhCCCCEEeec
Confidence 55665 4567888888888887665544333
No 346
>TIGR03820 lys_2_3_AblA lysine-2,3-aminomutase. This model describes lysine-2,3-aminomutase as found along with beta-lysine acetyltransferase in a two-enzyme pathway for making the compatible solute N-epsilon-acetyl-beta-lysine. This compatible solute, or osmolyte, is known to protect a number of methanogenic archaea against salt stress. The trusted cutoff distinguishes a tight clade with essentially full-length homology from additional homologs that are shorter or highly diverged in the C-terminal region. All members of this family have the radical SAM motif CXXXCXXC, while some but not all have a second copy of the motif in the C-terminal region.
Probab=28.11 E-value=2.3e+02 Score=28.77 Aligned_cols=66 Identities=14% Similarity=0.218 Sum_probs=36.9
Q ss_pred ChhhHHHhhcCCCE--EEEecCCceecCCccChhHHHHHHHHHHcCceE----EEEcC--CCCCCHHHHHHHHHhcCC
Q psy7233 84 SGDKQKDFLNSFDT--VLTDCDGVLWLENELISGADQVMNSLKSLGKKI----FYVTN--NSTKTREQLIVKLKHLGF 153 (383)
Q Consensus 84 ~~~~~~~~~~~~ka--ViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v----~ivTn--~~~~~~~~~~~~L~~lG~ 153 (383)
..+++-.++++++- |..=+++- .++.+.+.+++++|++.|+++ +++.+ .......++.++|...|+
T Consensus 204 IT~ell~~Lk~~~~~~v~~h~nhp----~Eit~~a~~Al~~L~~aGI~l~nQsVLLkGVND~~~~l~~L~~~L~~~gV 277 (417)
T TIGR03820 204 ITDELVAILKKHHPVWLNTHFNHP----REITASSKKALAKLADAGIPLGNQSVLLAGVNDCPRIMKKLVHKLVANRV 277 (417)
T ss_pred cCHHHHHHHHhcCCeEEEEeCCCh----HhChHHHHHHHHHHHHcCCEEEeeceEECCcCCCHHHHHHHHHHHHHCCC
Confidence 34555556666652 22333331 366788999999999999875 33332 233333344444545554
No 347
>PRK09348 glyQ glycyl-tRNA synthetase subunit alpha; Validated
Probab=28.09 E-value=58 Score=30.61 Aligned_cols=44 Identities=18% Similarity=0.200 Sum_probs=35.4
Q ss_pred cCCCCH----HHHHHHHHHcCCCCC--cEEEEecCchhhHHHHHHcCCcE
Q psy7233 295 IGKPSK----LIGSYLIEKYNLNPE--RTLMIGDRGNTDIRLGYNNGFQT 338 (383)
Q Consensus 295 ~gKP~p----~~~~~al~~lgi~p~--e~l~IGDs~~~DI~~A~~aGl~t 338 (383)
.-||+| +.|+.-++.+|++|. ++-+|+|+..+--.||--.|+..
T Consensus 83 ilKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV 132 (283)
T PRK09348 83 ILKPSPDNIQELYLGSLEALGIDPLEHDIRFVEDNWESPTLGAWGLGWEV 132 (283)
T ss_pred EEcCCCccHHHHHHHHHHHhCCCccccceeEeecCCCCCcccccccceEE
Confidence 458887 457778999999865 69999999999888988887543
No 348
>cd01445 TST_Repeats Thiosulfate sulfurtransferases (TST) contain 2 copies of the Rhodanese Homology Domain. Only the second repeat contains the catalytically active Cys residue. The role of the 1st repeat is uncertain, but believed to be involved in protein interaction. This CD aligns the 1st and 2nd repeats.
Probab=27.50 E-value=1.9e+02 Score=24.21 Aligned_cols=49 Identities=16% Similarity=0.159 Sum_probs=34.0
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCc----h---hhHHHHHHcCCcEEEEcCC
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRG----N---TDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~----~---~DI~~A~~aGl~tv~V~~G 344 (383)
.-|+++-|...++.+|++++..++|=|+- . .-..+++.+|.+-|.|..|
T Consensus 76 ~~p~~~~~~~~~~~~GI~~~~~vVvY~~~~~~g~~A~r~~~~l~~~G~~~v~ildG 131 (138)
T cd01445 76 MEPSEAEFAAMFEAKGIDLDKHLIATDGDDLGGFTACHIALAARLCGHPDVAILDG 131 (138)
T ss_pred CCCCHHHHHHHHHHcCCCCCCeEEEECCCCCcchHHHHHHHHHHHcCCCCeEEeCC
Confidence 45777889999999999988655444431 1 1123556789988888776
No 349
>PHA02597 30.2 hypothetical protein; Provisional
Probab=27.41 E-value=75 Score=27.93 Aligned_cols=32 Identities=22% Similarity=0.017 Sum_probs=24.1
Q ss_pred cCCccChhHHHHHHHHHHcCceEEEEcCCCCCC
Q psy7233 108 LENELISGADQVMNSLKSLGKKIFYVTNNSTKT 140 (383)
Q Consensus 108 d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~ 140 (383)
....++||+.++++.|++.+ +.+++||.+...
T Consensus 71 ~~~~~~pG~~e~L~~L~~~~-~~~i~Tn~~~~~ 102 (197)
T PHA02597 71 RYLSAYDDALDVINKLKEDY-DFVAVTALGDSI 102 (197)
T ss_pred HhccCCCCHHHHHHHHHhcC-CEEEEeCCccch
Confidence 33568999999999999875 677888844443
No 350
>PRK00208 thiG thiazole synthase; Reviewed
Probab=27.26 E-value=2.1e+02 Score=26.84 Aligned_cols=103 Identities=11% Similarity=0.127 Sum_probs=57.0
Q ss_pred cCCCChhhHHHHHHHhhC---CCCEEE-EecCCCCCCCCCCccccCcchHHHHHHHhcCCCccccCCCCHHHHHHHHHHc
Q psy7233 235 DSHISFPKLMKAACYLTN---PNTLFV-ATNTDESFPMGPHVTVPGTGSMVAAVKTGAQREPVVIGKPSKLIGSYLIEKY 310 (383)
Q Consensus 235 ~~~~~~~~l~~~l~~L~~---~g~~~i-~tn~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~gKP~p~~~~~al~~l 310 (383)
+....++++.+.++..+. .|+..+ +++.|.... ......|...+. -+....|. +.|--+|+.++.+.+..
T Consensus 101 d~~~llpd~~~tv~aa~~L~~~Gf~vlpyc~~d~~~a--k~l~~~G~~~vm-Plg~pIGs---g~gi~~~~~i~~i~e~~ 174 (250)
T PRK00208 101 DDKTLLPDPIETLKAAEILVKEGFVVLPYCTDDPVLA--KRLEEAGCAAVM-PLGAPIGS---GLGLLNPYNLRIIIEQA 174 (250)
T ss_pred CCCCCCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHH--HHHHHcCCCEeC-CCCcCCCC---CCCCCCHHHHHHHHHhc
Confidence 344555666655554444 488876 565544322 111122222110 00011121 12434577777777764
Q ss_pred CCCCCcEEEEecCc--hhhHHHHHHcCCcEEEEcCCCCC
Q psy7233 311 NLNPERTLMIGDRG--NTDIRLGYNNGFQTLLVLTGDTT 347 (383)
Q Consensus 311 gi~p~e~l~IGDs~--~~DI~~A~~aGl~tv~V~~G~~~ 347 (383)
++ -+++|=.+ ..|..-|-+.|.+.|+|+++...
T Consensus 175 ~v----pVIveaGI~tpeda~~AmelGAdgVlV~SAItk 209 (250)
T PRK00208 175 DV----PVIVDAGIGTPSDAAQAMELGADAVLLNTAIAV 209 (250)
T ss_pred CC----eEEEeCCCCCHHHHHHHHHcCCCEEEEChHhhC
Confidence 33 35555443 67999999999999999999766
No 351
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=26.96 E-value=59 Score=28.73 Aligned_cols=39 Identities=15% Similarity=0.259 Sum_probs=31.1
Q ss_pred HHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCCCCCh
Q psy7233 306 LIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTM 348 (383)
Q Consensus 306 al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~ 348 (383)
+.+.+.+ -+.++|+..+=++.|+++|++.+++.+.+++.
T Consensus 129 ~vrth~i----dlf~ed~~~na~~iAk~~~~~vilins~ynRk 167 (194)
T COG5663 129 AVRTHNI----DLFFEDSHDNAGQIAKNAGIPVILINSPYNRK 167 (194)
T ss_pred hhHhhcc----CccccccCchHHHHHHhcCCcEEEecCccccc
Confidence 3444444 37899999999999999999999999876653
No 352
>TIGR01668 YqeG_hyp_ppase HAD superfamily (subfamily IIIA) phosphatase, TIGR01668. This family consists of sequences from fungi, plants, cyanobacteria, gram-positive bacteria and Deinococcus. There is presently no characterization of any sequence in this family.
Probab=26.67 E-value=93 Score=26.98 Aligned_cols=29 Identities=17% Similarity=0.255 Sum_probs=23.1
Q ss_pred cCCCChhhHHHHHHHhhCCCCEE-EEecCC
Q psy7233 235 DSHISFPKLMKAACYLTNPNTLF-VATNTD 263 (383)
Q Consensus 235 ~~~~~~~~l~~~l~~L~~~g~~~-i~tn~d 263 (383)
.....|+++.+.++.|+++|.++ ++||.+
T Consensus 40 ~~~~~~pgv~e~L~~Lk~~g~~l~I~Sn~~ 69 (170)
T TIGR01668 40 DHNEAYPALRDWIEELKAAGRKLLIVSNNA 69 (170)
T ss_pred CCCCcChhHHHHHHHHHHcCCEEEEEeCCc
Confidence 34456899999999999988775 888864
No 353
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=26.45 E-value=1.6e+02 Score=24.91 Aligned_cols=20 Identities=20% Similarity=0.562 Sum_probs=16.2
Q ss_pred hhcCCCEEEEecCCceecCCc
Q psy7233 91 FLNSFDTVLTDCDGVLWLENE 111 (383)
Q Consensus 91 ~~~~~kaViFDlDGTL~d~~~ 111 (383)
.+..|+.++| +-|+.|.++.
T Consensus 53 Vl~~y~~viF-vHGCFWh~H~ 72 (150)
T COG3727 53 VLPKYRCVIF-VHGCFWHGHH 72 (150)
T ss_pred eecCceEEEE-EeeeeccCCc
Confidence 3678999999 7899998764
No 354
>PRK05301 pyrroloquinoline quinone biosynthesis protein PqqE; Provisional
Probab=25.98 E-value=2.5e+02 Score=27.66 Aligned_cols=72 Identities=14% Similarity=0.102 Sum_probs=46.1
Q ss_pred CChhhHHHhhc-CCCEEEEecCCc---eec---CC-ccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHH---HHHHHhc
Q psy7233 83 LSGDKQKDFLN-SFDTVLTDCDGV---LWL---EN-ELISGADQVMNSLKSLGKKIFYVTNNSTKTREQL---IVKLKHL 151 (383)
Q Consensus 83 ~~~~~~~~~~~-~~kaViFDlDGT---L~d---~~-~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~---~~~L~~l 151 (383)
++.+.++.+.+ .++.|.+.+||. .++ +. ..+..+.++++.+++.|+++.+.+.-+..+..++ .+.+.++
T Consensus 102 l~~~~~~~L~~~g~~~v~iSldg~~~e~~d~irg~~g~f~~~~~~i~~l~~~g~~v~i~~vv~~~N~~~i~~~~~~~~~l 181 (378)
T PRK05301 102 LTEARLAALKDAGLDHIQLSFQDSDPELNDRLAGTKGAFAKKLAVARLVKAHGYPLTLNAVIHRHNIDQIPRIIELAVEL 181 (378)
T ss_pred CCHHHHHHHHHcCCCEEEEEecCCCHHHHHHHcCCCchHHHHHHHHHHHHHCCCceEEEEEeecCCHHHHHHHHHHHHHc
Confidence 34445544444 368899999995 222 22 3577788899999999988765543333444444 5555668
Q ss_pred CCC
Q psy7233 152 GFN 154 (383)
Q Consensus 152 G~~ 154 (383)
|++
T Consensus 182 gv~ 184 (378)
T PRK05301 182 GAD 184 (378)
T ss_pred CCC
Confidence 875
No 355
>COG4464 CapC Capsular polysaccharide biosynthesis protein [Carbohydrate transport and metabolism / Cell envelope biogenesis, outer membrane]
Probab=25.97 E-value=5.4e+02 Score=23.88 Aligned_cols=126 Identities=13% Similarity=0.125 Sum_probs=72.6
Q ss_pred EEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCC-----HHHHHHHHHhcCCCCCcCcccchHHHHHHHH
Q psy7233 97 TVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKT-----REQLIVKLKHLGFNAEPNEIIGTAYLAAQYL 171 (383)
Q Consensus 97 aViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~-----~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l 171 (383)
-|++|+| ||..-.+...+.++...++|+.-+++|..--++ .+.+.+.+.+ ....+
T Consensus 7 HIlp~iD----DGp~s~eesl~ml~~A~~qGvt~iVaTsHh~~g~y~n~~~~v~~~~~~----------------ln~~~ 66 (254)
T COG4464 7 HILPDID----DGPKSLEESLAMLREAVRQGVTKIVATSHHLHGRYENPIEKVKEKANQ----------------LNEIL 66 (254)
T ss_pred cccCCCC----CCCCcHHHHHHHHHHHHHcCceEEeecccccCCccCChHHHHHHHHHH----------------HHHHH
Confidence 4667776 455566778888999999999999998632221 1222222221 12222
Q ss_pred Hhc-----CCCCCeEEEEeCcchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHH
Q psy7233 172 KKH-----LDPKKKAYIVGSSGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKA 246 (383)
Q Consensus 172 ~~~-----~~~~~~~~~ig~~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~ 246 (383)
.+. +.+++++.. ...+.+.+..-.+... ....+.++-|+....+....+.
T Consensus 67 ~~~aidl~v~pGQEIrI--t~~vl~~l~~g~I~ti-----------------------ndskYlLIEF~~~~v~~ya~~l 121 (254)
T COG4464 67 KKEAIDLKVLPGQEIRI--TGDVLDDLDKGIILTI-----------------------NDSKYLLIEFPMNHVPRYADQL 121 (254)
T ss_pred HhhcCCceeccCceEEE--chHHHHHHhcCccccc-----------------------cccceEEEEccCCcchhhHHHH
Confidence 221 012222221 1233333333222211 1236788888888888888999
Q ss_pred HHHhhCCCCEEEEecCCCCCC
Q psy7233 247 ACYLTNPNTLFVATNTDESFP 267 (383)
Q Consensus 247 l~~L~~~g~~~i~tn~d~~~~ 267 (383)
+-.++.+|++=+...+.+...
T Consensus 122 f~elq~kGi~PIIAHPERn~~ 142 (254)
T COG4464 122 FFELQSKGIIPIIAHPERNRA 142 (254)
T ss_pred HHHHHHCCceeeeechhhHHH
Confidence 999999998877777766543
No 356
>PRK10748 flavin mononucleotide phosphatase; Provisional
Probab=25.92 E-value=60 Score=29.80 Aligned_cols=28 Identities=11% Similarity=0.181 Sum_probs=23.3
Q ss_pred CccChhHHHHHHHHHHcCceEEEEcCCCC
Q psy7233 110 NELISGADQVMNSLKSLGKKIFYVTNNST 138 (383)
Q Consensus 110 ~~~~p~A~eal~~l~~~Gi~v~ivTn~~~ 138 (383)
..++|++.++|+.|++. +++.++||...
T Consensus 112 ~~~~~gv~~~L~~L~~~-~~l~i~Tn~~~ 139 (238)
T PRK10748 112 IDVPQATHDTLKQLAKK-WPLVAITNGNA 139 (238)
T ss_pred CCCCccHHHHHHHHHcC-CCEEEEECCCc
Confidence 46789999999999875 89999999543
No 357
>KOG0210|consensus
Probab=25.83 E-value=54 Score=35.40 Aligned_cols=51 Identities=18% Similarity=0.301 Sum_probs=36.2
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCCCCChHHHHhcccccchhhcCCCccEEeCCHhhHHHhh
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTGDTTMEKAIAWSKSEDEEYKSRVADYYLSSLGDMLPFL 381 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G~~~~~~~~~~~~~~~~~~~~~~pd~vi~sl~eL~~~l 381 (383)
.++..|||. .||+.|.++|.+. |+|....+... ..-+||.|..+..+.++|
T Consensus 782 krvc~IGDG-GNDVsMIq~A~~G-iGI~gkEGkQA--------------SLAADfSItqF~Hv~rLL 832 (1051)
T KOG0210|consen 782 KRVCAIGDG-GNDVSMIQAADVG-IGIVGKEGKQA--------------SLAADFSITQFSHVSRLL 832 (1051)
T ss_pred ceEEEEcCC-Cccchheeecccc-eeeeccccccc--------------chhccccHHHHHHHHHHh
Confidence 889999999 9999999988743 33332223322 235799998888887765
No 358
>PRK11660 putative transporter; Provisional
Probab=25.36 E-value=2.5e+02 Score=29.66 Aligned_cols=71 Identities=15% Similarity=0.087 Sum_probs=45.0
Q ss_pred hcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC--CcCcccchHHHHH
Q psy7233 92 LNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA--EPNEIIGTAYLAA 168 (383)
Q Consensus 92 ~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i--~~~~i~~s~~~~~ 168 (383)
.+..+.|++|+.++=.-.......-.+..+++++ |+++.++.= .+.+.+.++..|+.- ....+..+.+.+.
T Consensus 488 ~~~~~~VVlD~~~V~~iDssg~~~L~~l~~~l~~-g~~l~l~~l-----~~~v~~~l~~~gl~~~~~~~~if~~~~~Al 560 (568)
T PRK11660 488 TEGKRIVVLQWDAVPVLDAGGLDAFQRFVKRLPE-GCELRICNL-----QFQPLRTLARAGIQPIPGRLAFYPTLREAL 560 (568)
T ss_pred CCCCCEEEEEcCCCCcccHHHHHHHHHHHHHHHC-CCEEEEecC-----ChHHHHHHHHCCChhhcCcccccCCHHHHH
Confidence 3568899999999754334445556677788888 888777552 235777787777642 2344444444333
No 359
>PRK05642 DNA replication initiation factor; Validated
Probab=25.24 E-value=1e+02 Score=28.42 Aligned_cols=78 Identities=18% Similarity=0.230 Sum_probs=43.5
Q ss_pred HHHHHHHHhh--hhceeecccccccccccccccCChhhHHHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCce
Q psy7233 52 LQQYFCHKFI--ALKCIVATSQTTVMKLINLSELSGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKK 129 (383)
Q Consensus 52 ~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~ 129 (383)
|-+..||.+. .+++++++..++.. ....+.+.+.+++.+++|==|.+-.....-..--..++.++..|.+
T Consensus 61 Ll~a~~~~~~~~~~~v~y~~~~~~~~--------~~~~~~~~~~~~d~LiiDDi~~~~~~~~~~~~Lf~l~n~~~~~g~~ 132 (234)
T PRK05642 61 LLQAACLRFEQRGEPAVYLPLAELLD--------RGPELLDNLEQYELVCLDDLDVIAGKADWEEALFHLFNRLRDSGRR 132 (234)
T ss_pred HHHHHHHHHHhCCCcEEEeeHHHHHh--------hhHHHHHhhhhCCEEEEechhhhcCChHHHHHHHHHHHHHHhcCCE
Confidence 3445566655 46777776655322 1233444456678888876665432211112233456677778888
Q ss_pred EEEEcCCC
Q psy7233 130 IFYVTNNS 137 (383)
Q Consensus 130 v~ivTn~~ 137 (383)
+++.++.+
T Consensus 133 ilits~~~ 140 (234)
T PRK05642 133 LLLAASKS 140 (234)
T ss_pred EEEeCCCC
Confidence 87777643
No 360
>TIGR02329 propionate_PrpR propionate catabolism operon regulatory protein PrpR. At least five distinct pathways exists for the catabolism of propionate by way of propionyl-CoA. Members of this family represent the transcriptional regulatory protein PrpR, whose gene is found in most cases divergently transcribed from an operon for the methylcitric acid cycle of propionate catabolism. 2-methylcitric acid, a catabolite by this pathway, is a coactivator of PrpR.
Probab=24.98 E-value=8.2e+02 Score=25.65 Aligned_cols=26 Identities=12% Similarity=0.280 Sum_probs=22.5
Q ss_pred EEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 317 TLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 317 ~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
-++|||. .+ ...|+++|+.+|++.+|
T Consensus 147 ~~viG~~-~~-~~~A~~~gl~~ili~s~ 172 (526)
T TIGR02329 147 GAVVGAG-LI-TDLAEQAGLHGVFLYSA 172 (526)
T ss_pred CEEECCh-HH-HHHHHHcCCceEEEecH
Confidence 4778999 55 67899999999999887
No 361
>PRK09522 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase; Provisional
Probab=24.89 E-value=6.3e+02 Score=26.53 Aligned_cols=57 Identities=18% Similarity=0.056 Sum_probs=43.3
Q ss_pred EEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCC
Q psy7233 99 LTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNA 155 (383)
Q Consensus 99 iFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i 155 (383)
..|+.||=.|+...++-.--+.--+.+.|++|+.-.|++.-+.......|..+|+++
T Consensus 273 ~iD~~gtGgdg~~t~nist~aa~v~A~~Gv~V~kHG~r~~ss~~GsadvlealGi~~ 329 (531)
T PRK09522 273 FADIVGTGGDGSNSINISTASAFVAAACGLKVAKHGNRSVSSKSGSSDLLAAFGINL 329 (531)
T ss_pred cccccCCCCCCCCCcccHHHHHHHHHhCCCcEEEeCCCCCCCCccHHHHHHHcCCCC
Confidence 589999988876655544334445567899999999987777777788898899976
No 362
>COG2216 KdpB High-affinity K+ transport system, ATPase chain B [Inorganic ion transport and metabolism]
Probab=24.80 E-value=96 Score=32.40 Aligned_cols=48 Identities=21% Similarity=0.451 Sum_probs=37.0
Q ss_pred CceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 104 GVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 104 GTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
||++-.+.+-||.+|-+.++|+.|++.+.+|+.-+.+...+++ +.|++
T Consensus 440 GVI~LkDivK~Gi~ERf~elR~MgIkTvM~TGDN~~TAa~IA~---EAGVD 487 (681)
T COG2216 440 GVIYLKDIVKPGIKERFAELRKMGIKTVMITGDNPLTAAAIAA---EAGVD 487 (681)
T ss_pred EEEEehhhcchhHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHH---HhCch
Confidence 5555556677999999999999999999999976666555543 45665
No 363
>COG0547 TrpD Anthranilate phosphoribosyltransferase [Amino acid transport and metabolism]
Probab=24.74 E-value=4.6e+02 Score=25.84 Aligned_cols=130 Identities=16% Similarity=0.048 Sum_probs=76.1
Q ss_pred EecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCCCCcCcccchHHHHHHHHHhcCCCCC
Q psy7233 100 TDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFNAEPNEIIGTAYLAAQYLKKHLDPKK 179 (383)
Q Consensus 100 FDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~i~~~~i~~s~~~~~~~l~~~~~~~~ 179 (383)
.|+.||=.|+...++-.--+.--+...|++|+---|++.-+.......|..+|+++.. +...+.+.+.+. +
T Consensus 78 vDi~GTGGDg~~T~NiSt~aA~v~A~~Gv~VaKHGnrs~sSksGsaDvleaLGv~l~~-----~~e~~~~~l~~~----g 148 (338)
T COG0547 78 VDIVGTGGDGANTINISTAAAIVAAAAGVPVAKHGNRSVSSKSGSADVLEALGVNLEL-----SPEQAARALEET----G 148 (338)
T ss_pred CCeecCCCCCCCcccchHHHHHHHHhCCCcEEeECCCCCCCCCcHHHHHHHcCCCCCC-----CHHHHHHHHHhc----C
Confidence 7999998988655544444444456779999999998888888888999999998642 333345555543 2
Q ss_pred eEEEEeC------cchHHHHHHcCCcccccCCCCCCCCCCCcccccccCCCCCccEEEEeccCCCChhhHHHHHHHhh
Q psy7233 180 KAYIVGS------SGIADELNLAGIENFGVGPDVMIPGRDLKTDHEKLNLDPHVGAVVVGFDSHISFPKLMKAACYLT 251 (383)
Q Consensus 180 ~~~~ig~------~~l~~~l~~~gi~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~Vv~g~~~~~~~~~l~~~l~~L~ 251 (383)
-.++... ..+...=+++|++...- ......+.-.+...++|.....--+.+.++++.|-
T Consensus 149 ~~FlfAp~~hp~~k~v~~vR~~LG~RTifN-------------~LGPL~NPa~~~~qliGV~~p~~~~~~A~~l~~LG 213 (338)
T COG0547 149 IGFLFAPAYHPAMKHVAPVRKELGVRTIFN-------------LLGPLLNPARAKLQLIGVYHPELVELLAEALRLLG 213 (338)
T ss_pred eEEEEccccCHHHHHHHHHHHHcCCCchHH-------------hhccccCCCCCCceEEEEeCHHHHHHHHHHHHHhC
Confidence 2222221 12222224456664311 01111123356677788555444455777777665
No 364
>PRK10076 pyruvate formate lyase II activase; Provisional
Probab=24.73 E-value=1.5e+02 Score=27.05 Aligned_cols=64 Identities=16% Similarity=0.113 Sum_probs=41.5
Q ss_pred ChhhHHHhhcCCCEEEE-ecCCceecCCcc--Chh-HHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHH
Q psy7233 84 SGDKQKDFLNSFDTVLT-DCDGVLWLENEL--ISG-ADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKL 148 (383)
Q Consensus 84 ~~~~~~~~~~~~kaViF-DlDGTL~d~~~~--~p~-A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L 148 (383)
+.+++.+.+.+.+.++- ...|+-+.|.++ .+. +.++++.+++.|+.+.+.||. ..+.+.+.+.+
T Consensus 20 t~eel~~~~~~~~~f~~~sggGVt~SGGEPllq~~fl~~l~~~~k~~gi~~~leTnG-~~~~~~~~~l~ 87 (213)
T PRK10076 20 TLDALEREVMKDDIFFRTSGGGVTLSGGEVLMQAEFATRFLQRLRLWGVSCAIETAG-DAPASKLLPLA 87 (213)
T ss_pred CHHHHHHHHHhhhHhhcCCCCEEEEeCchHHcCHHHHHHHHHHHHHcCCCEEEECCC-CCCHHHHHHHH
Confidence 46666665555554332 446877776544 233 578999999999999999994 44444444333
No 365
>cd08539 SAM_PNT-ESE-3-like Sterile alpha motif (SAM)/Pointed domain of ESE-3 like ETS transcriptional regulators. SAM Pointed domain of ESE-3-like (Epithelium-Specific ETS) subfamily of ETS transcriptional regulators is a putative protein-protein interaction domain. It can act as a major transactivator by providing a potential docking site for co-activators. The ESE-3 transcriptional activator is involved in regulation of glandular epithelium differentiation through the MAP kinase signaling cascade. It is found to be expressed in glandular epithelium of prostate, pancreas, salivary gland, and trachea. Additionally, ESE-3 is differentially expressed during monocyte-derived dendritic cells development. DNA binding consensus motif for ESE-3 consists of purine-rich GGAA/T core sequence. The expression profiles of these factors are altered in epithelial cancers. Members of this subfamily are potential targets for cancer therapy.
Probab=24.60 E-value=34 Score=25.84 Aligned_cols=30 Identities=17% Similarity=0.222 Sum_probs=26.0
Q ss_pred hhhhhhhcceeeeeCCCCcchHHHHHHHHH
Q psy7233 21 ILVCMCLKTTFLLIPPKNQICLWEKLEKLQ 50 (383)
Q Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 50 (383)
--.|+|-+.-|++.||-.---||+.|+.|.
T Consensus 41 ~~LC~ms~e~F~~~~p~~GdiLy~~l~~~~ 70 (74)
T cd08539 41 EHLCSMSLQEFTRAAGTAGQLLYSNLQHLK 70 (74)
T ss_pred HHHHccCHHHHhhcCCchHHHHHHHHHHHh
Confidence 346999999999999999999999888763
No 366
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=24.58 E-value=2.4e+02 Score=26.72 Aligned_cols=47 Identities=13% Similarity=0.343 Sum_probs=28.4
Q ss_pred hhHHHhhcCCCEEEEecCCceecC-CccChhHHHHHHHHHHcCceEEEEcC
Q psy7233 86 DKQKDFLNSFDTVLTDCDGVLWLE-NELISGADQVMNSLKSLGKKIFYVTN 135 (383)
Q Consensus 86 ~~~~~~~~~~kaViFDlDGTL~d~-~~~~p~A~eal~~l~~~Gi~v~ivTn 135 (383)
+...+.++.|+. +.+||.++.- ++. ...-.+++.....|.|+.++|+
T Consensus 199 ~d~~~~~~~f~~--~~~~~~I~TKlDet-~~~G~~l~~~~~~~~Pi~~it~ 246 (270)
T PRK06731 199 KDMIEIITNFKD--IHIDGIVFTKFDET-ASSGELLKIPAVSSAPIVLMTD 246 (270)
T ss_pred HHHHHHHHHhCC--CCCCEEEEEeecCC-CCccHHHHHHHHHCcCEEEEeC
Confidence 344455566654 5677776532 111 1122466777788999999998
No 367
>PRK11557 putative DNA-binding transcriptional regulator; Provisional
Probab=24.54 E-value=1.7e+02 Score=27.34 Aligned_cols=31 Identities=13% Similarity=0.179 Sum_probs=24.5
Q ss_pred ChhHHHHHHHHHHcCceEEEEcCCCCCCHHH
Q psy7233 113 ISGADQVMNSLKSLGKKIFYVTNNSTKTREQ 143 (383)
Q Consensus 113 ~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~ 143 (383)
.+...++++.++++|.+++.+|++..-+...
T Consensus 188 ~~~~~~~~~~ak~~ga~iI~IT~~~~s~la~ 218 (278)
T PRK11557 188 RRELNLAADEALRVGAKVLAITGFTPNALQQ 218 (278)
T ss_pred CHHHHHHHHHHHHcCCCEEEEcCCCCCchHH
Confidence 4667788999999999999999966554443
No 368
>TIGR00388 glyQ glycyl-tRNA synthetase, tetrameric type, alpha subunit. This tetrameric form of glycyl-tRNA synthetase (2 alpha, 2 beta) is found in the majority of completed eubacterial genomes, with the two genes fused in a few species. A substantially different homodimeric form (not recognized by this model) replaces this form in the Archaea, animals, yeasts, and some eubacteria.
Probab=24.48 E-value=75 Score=30.05 Aligned_cols=44 Identities=14% Similarity=0.191 Sum_probs=35.3
Q ss_pred cCCCCH----HHHHHHHHHcCCCCC--cEEEEecCchhhHHHHHHcCCcE
Q psy7233 295 IGKPSK----LIGSYLIEKYNLNPE--RTLMIGDRGNTDIRLGYNNGFQT 338 (383)
Q Consensus 295 ~gKP~p----~~~~~al~~lgi~p~--e~l~IGDs~~~DI~~A~~aGl~t 338 (383)
.-||+| +.|+.-++.+|++|. ++-+|+|+..+--.||--.|+..
T Consensus 80 ilKPsP~niQelYL~SL~~lGid~~~hDIRFVEDnWEsPTLGAwGlGWEV 129 (293)
T TIGR00388 80 VIKPSPDNIQELYLDSLRALGIDPTEHDIRFVEDNWENPTLGAWGLGWEV 129 (293)
T ss_pred EECCCCccHHHHHHHHHHHhCCCccccCeeEeecCCCCCcccccccccEE
Confidence 458887 457777899999865 69999999999888988877543
No 369
>PRK11303 DNA-binding transcriptional regulator FruR; Provisional
Probab=24.25 E-value=6e+02 Score=23.82 Aligned_cols=39 Identities=3% Similarity=-0.167 Sum_probs=25.8
Q ss_pred HHHHHHHcCCC-CCcEEEEecCchhhHHHHHHcCCcEEEEc
Q psy7233 303 GSYLIEKYNLN-PERTLMIGDRGNTDIRLGYNNGFQTLLVL 342 (383)
Q Consensus 303 ~~~al~~lgi~-p~e~l~IGDs~~~DI~~A~~aGl~tv~V~ 342 (383)
...++...|+. |+++-++|.+ ..++...-.-++.||...
T Consensus 253 ~~~al~~~g~~vP~disv~gfd-~~~~~~~~~p~lttv~~~ 292 (328)
T PRK11303 253 VLDVLLERPGELPSDLAIATFG-DNELLDFLPCPVNAVAQQ 292 (328)
T ss_pred HHHHHHHcCCCCCCceEEEEeC-ChHHHhccCCCceEEecC
Confidence 45666777875 8999999988 444443334577777654
No 370
>COG5663 Uncharacterized conserved protein [Function unknown]
Probab=23.99 E-value=52 Score=29.07 Aligned_cols=28 Identities=11% Similarity=0.080 Sum_probs=19.8
Q ss_pred EEEEecCCceecCCccChhHHHHHHHHH
Q psy7233 97 TVLTDCDGVLWLENELISGADQVMNSLK 124 (383)
Q Consensus 97 aViFDlDGTL~d~~~~~p~A~eal~~l~ 124 (383)
-+..|+|||+.+.....|--..+++...
T Consensus 8 ~~ciDIDGtit~~~t~~~~~n~~f~ksl 35 (194)
T COG5663 8 RCCIDIDGTITDDPTFAPYLNPAFEKSL 35 (194)
T ss_pred heeeccCCceecCcccchhccHHHHhhh
Confidence 4678999999987666665555555443
No 371
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=23.59 E-value=2.1e+02 Score=29.77 Aligned_cols=93 Identities=12% Similarity=0.051 Sum_probs=57.2
Q ss_pred CCCChhhHHHHHHHhhCCCCEEEEecCCCCCCCCCCccccCcchH--HHHHHHhcCCCccccCCCCHHHHHHHHHHcCCC
Q psy7233 236 SHISFPKLMKAACYLTNPNTLFVATNTDESFPMGPHVTVPGTGSM--VAAVKTGAQREPVVIGKPSKLIGSYLIEKYNLN 313 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~~~i~tn~d~~~~~~~~~~~~~~~~l--~~~~~~~~~~~~~~~gKP~p~~~~~al~~lgi~ 313 (383)
+...|-..++.+..++++|+.+.+.+....... .........-+ -+.|.. .. .-=-|+.+.+.++++++++.
T Consensus 253 ~G~~fk~fQ~~Ik~l~kqGVlLav~SKN~~~da-~evF~khp~MiLkeedfa~---~~--iNW~~K~eNirkIAkklNlg 326 (574)
T COG3882 253 EGEAFKTFQNFIKGLKKQGVLLAVCSKNTEKDA-KEVFRKHPDMILKEEDFAV---FQ--INWDPKAENIRKIAKKLNLG 326 (574)
T ss_pred CchhHHHHHHHHHHHHhccEEEEEecCCchhhH-HHHHhhCCCeEeeHhhhhh---he--ecCCcchhhHHHHHHHhCCC
Confidence 445688899999999999999844433322111 11011111000 011111 11 11247788999999999999
Q ss_pred CCcEEEEecCchhhHHHHHHcC
Q psy7233 314 PERTLMIGDRGNTDIRLGYNNG 335 (383)
Q Consensus 314 p~e~l~IGDs~~~DI~~A~~aG 335 (383)
.+..++|.|+ ...-+--++-+
T Consensus 327 ~dSmvFiDD~-p~ErE~vk~~~ 347 (574)
T COG3882 327 LDSMVFIDDN-PAERELVKREL 347 (574)
T ss_pred ccceEEecCC-HHHHHHHHhcC
Confidence 9999999999 55576666666
No 372
>cd01766 Ufm1 Urm1-like ubiquitin domain. Ufm1 (ubiquitin-fold modifier 1) is a post-translational UBL (ubiquitin-like) modifier with a tertiary structure similar to that of ubiquitin. Ufm1 is initially expressed as a precursor which undergoes C-terminal cleavage to expose a conserved glycine residue that is required for the conjugation reactions involving Ufm1.
Probab=23.35 E-value=1.1e+02 Score=23.14 Aligned_cols=46 Identities=13% Similarity=0.289 Sum_probs=37.4
Q ss_pred CCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 296 GKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 296 gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
.-|.....++++|.+++++..+..|-++ ...|-.++.||- |+...|
T Consensus 25 ~aPftAvlkfaAEeFkv~~~TsAiiTnd-GvGINP~qtAGn--vflkhg 70 (82)
T cd01766 25 STPFTAVLKFAAEEFKVPAATSAIITND-GIGINPAQTAGN--VFLKHG 70 (82)
T ss_pred cCchHHHHHHHHHhcCCCccceeEEecC-ccccChhhcccc--eeeecC
Confidence 3477888999999999999999999888 888999999983 444444
No 373
>PTZ00124 adenosine deaminase; Provisional
Probab=23.29 E-value=7.1e+02 Score=24.69 Aligned_cols=37 Identities=16% Similarity=0.168 Sum_probs=24.7
Q ss_pred CEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCC
Q psy7233 96 DTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNN 136 (383)
Q Consensus 96 kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~ 136 (383)
+.|-||++|- .. .++.-.++++.+++.|+++.+=.+.
T Consensus 192 ~vvGiDLaG~---E~-~~~~f~~~f~~Ar~~Gl~~t~HaGE 228 (362)
T PTZ00124 192 DFVGFDHAGH---EV-DLKPFKDIFDYVREAGVNLTVHAGE 228 (362)
T ss_pred CeEEEeccCC---CC-CcHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3788888883 11 1344567788888888887666664
No 374
>PRK01395 V-type ATP synthase subunit F; Provisional
Probab=23.24 E-value=90 Score=25.09 Aligned_cols=28 Identities=18% Similarity=0.239 Sum_probs=23.0
Q ss_pred CcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 315 ERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 315 ~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
.++.+|||. .+ +.+.+.+|++++.|...
T Consensus 4 ~kIaVIGD~-dt-v~GFrLaGi~~~~v~~~ 31 (104)
T PRK01395 4 YKIGVVGDK-DS-ILPFKALGIDVFPVIDE 31 (104)
T ss_pred eeEEEEECH-HH-HHHHHHcCCeeEEecCh
Confidence 368999996 76 99999999988777554
No 375
>COG4229 Predicted enolase-phosphatase [Energy production and conversion]
Probab=23.11 E-value=1.2e+02 Score=27.20 Aligned_cols=27 Identities=26% Similarity=0.452 Sum_probs=24.2
Q ss_pred ccChhHHHHHHHHHHcCceEEEEcCCC
Q psy7233 111 ELISGADQVMNSLKSLGKKIFYVTNNS 137 (383)
Q Consensus 111 ~~~p~A~eal~~l~~~Gi~v~ivTn~~ 137 (383)
.++|.|.++++++++.|+++++-+..+
T Consensus 103 hlypDav~~ik~wk~~g~~vyiYSSGS 129 (229)
T COG4229 103 HLYPDAVQAIKRWKALGMRVYIYSSGS 129 (229)
T ss_pred ccCHhHHHHHHHHHHcCCcEEEEcCCC
Confidence 679999999999999999999988733
No 376
>PF03709 OKR_DC_1_N: Orn/Lys/Arg decarboxylase, N-terminal domain; InterPro: IPR005308 This domain has a flavodoxin-like fold, and is termed the "wing" domain because of its position in the overall 3D structure. Ornithine decarboxylase from Lactobacillus 30a (L30a OrnDC, P43099 from SWISSPROT) is representative of the large, pyridoxal-5'-phosphate-dependent decarboxylases that act on lysine, arginine or ornithine. The crystal structure of the L30a OrnDC has been solved to 3.0 A resolution. Six dimers related by C6 symmetry compose the enzymatically active dodecamer (approximately 106 Da). Each monomer of L30a OrnDC can be described in terms of five sequential folding domains. The amino-terminal domain, residues 1 to 107, consists of a five-stranded beta-sheet termed the "wing" domain. Two wing domains of each dimer project inward towards the centre of the dodecamer and contribute to dodecamer stabilisation [].; GO: 0016831 carboxy-lyase activity; PDB: 3Q16_C 3N75_A 1C4K_A 1ORD_A 2VYC_D.
Probab=22.64 E-value=1.5e+02 Score=23.97 Aligned_cols=37 Identities=19% Similarity=0.435 Sum_probs=26.3
Q ss_pred cCCCEEEEecCCceecCCccChhHHHHHHHHHHc--CceEEEEcC
Q psy7233 93 NSFDTVLTDCDGVLWLENELISGADQVMNSLKSL--GKKIFYVTN 135 (383)
Q Consensus 93 ~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~--Gi~v~ivTn 135 (383)
.++-+|++|+|+ .....+.+.++.+++. ++|++++++
T Consensus 37 ~~i~avvi~~d~------~~~~~~~~ll~~i~~~~~~iPVFl~~~ 75 (115)
T PF03709_consen 37 TDIAAVVISWDG------EEEDEAQELLDKIRERNFGIPVFLLAE 75 (115)
T ss_dssp TTEEEEEEECHH------HHHHHHHHHHHHHHHHSTT-EEEEEES
T ss_pred CCeeEEEEEccc------ccchhHHHHHHHHHHhCCCCCEEEEec
Confidence 467899999992 2234566777777765 589999998
No 377
>COG1167 ARO8 Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs [Transcription / Amino acid transport and metabolism]
Probab=22.61 E-value=8.3e+02 Score=24.89 Aligned_cols=63 Identities=27% Similarity=0.356 Sum_probs=38.1
Q ss_pred HHHHHHHHH-hcCCCCCcCcccchHH--HHHHHHHhcC-CCCCeEEEEe--CcchHHHHHHcCCccccc
Q psy7233 141 REQLIVKLK-HLGFNAEPNEIIGTAY--LAAQYLKKHL-DPKKKAYIVG--SSGIADELNLAGIENFGV 203 (383)
Q Consensus 141 ~~~~~~~L~-~lG~~i~~~~i~~s~~--~~~~~l~~~~-~~~~~~~~ig--~~~l~~~l~~~gi~~~~~ 203 (383)
++.+++.+. ..|+...+++|+...+ .+.+.+.+.+ .++..+.+.. -.+..+.++..|.++.+.
T Consensus 138 R~~ia~~l~~~~g~~~~~~~IiiT~G~q~al~l~~~~l~~pGd~v~vE~PtY~~~~~~~~~~g~~~~~v 206 (459)
T COG1167 138 REAIAAYLLARRGISCEPEQIVITSGAQQALDLLLRLLLDPGDTVLVEDPTYPGALQALEALGARVIPV 206 (459)
T ss_pred HHHHHHHHHHhcCCccCcCeEEEeCCHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHcCCcEEec
Confidence 345566666 6899998887764432 2334444432 2444554432 247778888888887643
No 378
>cd07042 STAS_SulP_like_sulfate_transporter Sulphate Transporter and Anti-Sigma factor antagonist domain of SulP-like sulfate transporters, plays a role in the function and regulation of the transport activity, proposed general NTP binding function. The SulP family is a large and diverse family of anion transporters, with members from eubacteria, plants, fungi, and mammals. They contain 10 to 14 transmembrane helices which form the catalytic core of the protein and a C-terminal extension, the STAS (Sulphate Transporter and AntiSigma factor antagonist) domain which plays a role in the function and regulation of the transport activity. The STAS domain is found in the C-terminal region of sulphate transporters and bacterial anti-sigma factor antagonists. It has been suggested that this domain may have a general NTP binding function.
Probab=22.35 E-value=2.6e+02 Score=21.25 Aligned_cols=55 Identities=15% Similarity=0.312 Sum_probs=35.1
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.+++|+-++=.-.........++.+.++++|+.+.+..= .+.+.+.+...|+.
T Consensus 41 ~~~lilD~~~v~~iDss~~~~L~~~~~~~~~~~~~~~l~~~-----~~~~~~~l~~~g~~ 95 (107)
T cd07042 41 LKVVILDLSAVNFIDSTAAEALEELVKDLRKRGVELYLAGL-----NPQVRELLERAGLL 95 (107)
T ss_pred ceEEEEECCCCchhhHHHHHHHHHHHHHHHHCCCEEEEecC-----CHHHHHHHHHcCcH
Confidence 37899999997432223334445667777788888777632 23666667777764
No 379
>KOG3107|consensus
Probab=22.33 E-value=82 Score=31.43 Aligned_cols=47 Identities=13% Similarity=0.092 Sum_probs=38.9
Q ss_pred ccCCCCHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHHHcCCcEEEEcCC
Q psy7233 294 VIGKPSKLIGSYLIEKYNLNPERTLMIGDRGNTDIRLGYNNGFQTLLVLTG 344 (383)
Q Consensus 294 ~~gKP~p~~~~~al~~lgi~p~e~l~IGDs~~~DI~~A~~aGl~tv~V~~G 344 (383)
..|| -..|+++.+++|- .-.-++|||. ...-.+||+..|..+.|...
T Consensus 407 kiGK--escFerI~~RFg~-K~~yvvIgdG-~eee~aAK~ln~PfwrI~~h 453 (468)
T KOG3107|consen 407 KIGK--ESCFERIQSRFGR-KVVYVVIGDG-VEEEQAAKALNMPFWRISSH 453 (468)
T ss_pred hccH--HHHHHHHHHHhCC-ceEEEEecCc-HHHHHHHHhhCCceEeeccC
Confidence 3566 5669999999996 6678999999 66688999999999888653
No 380
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=22.26 E-value=1.3e+02 Score=28.20 Aligned_cols=17 Identities=18% Similarity=0.458 Sum_probs=13.2
Q ss_pred ccEEeCCHhhHHHhhhC
Q psy7233 367 ADYYLSSLGDMLPFLSS 383 (383)
Q Consensus 367 pd~vi~sl~eL~~~l~~ 383 (383)
+.-++.+++++.+++++
T Consensus 233 ~~~~~~~~~e~l~~l~~ 249 (249)
T PF02571_consen 233 GDPVVETIEELLDWLEQ 249 (249)
T ss_pred CCcccCCHHHHHHHHhC
Confidence 44457999999999874
No 381
>PF08934 Rb_C: Rb C-terminal domain; InterPro: IPR015030 The Rb C-terminal domain is required for high-affinity binding to E2F-DP complexes and for maximal repression of E2F-responsive promoters, thereby acting as a growth suppressor by blocking the G1-S transition of the cell cycle. This domain has a strand-loop-helix structure, which directly interacts with both E2F1 and DP1, followed by a tail segment that lacks regular secondary structure []. ; PDB: 1H25_E 1GUX_B 3POM_A 1GH6_B 2AZE_C 1N4M_A 1O9K_H 4ELL_B 2R7G_C 4ELJ_A ....
Probab=22.12 E-value=82 Score=26.80 Aligned_cols=41 Identities=24% Similarity=0.216 Sum_probs=16.1
Q ss_pred HHHHHHHHHHHHHHhhhhceeecccccccccccccccCChhhHHHhhcCCCEEEEecCCc
Q psy7233 46 LEKLQELQQYFCHKFIALKCIVATSQTTVMKLINLSELSGDKQKDFLNSFDTVLTDCDGV 105 (383)
Q Consensus 46 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kaViFDlDGT 105 (383)
-++||++.|..|.-==++||..-.+.+ . +..|-+-||+||-
T Consensus 71 s~~lq~IN~mv~~~~Rs~KR~~~~~~a--~-----------------kPlKRL~fd~~gq 111 (155)
T PF08934_consen 71 SEKLQKINQMVNSGERSKKRSLDSSDA--P-----------------KPLKRLRFDMDGQ 111 (155)
T ss_dssp HHHHHHHHHHHH--TT-----STT-----------------------TT----EE-----
T ss_pred HHHHHHHHHHHccchhhhhhhccCCCC--C-----------------ChHHHhhccccCC
Confidence 688999988888766688888765544 2 2346889999995
No 382
>TIGR00815 sulP high affinity sulphate transporter 1. (2) SO42- (out) + nHCO3- (in) SO42- (in) + nHCO3- (out).
Probab=22.09 E-value=1.5e+02 Score=31.23 Aligned_cols=55 Identities=20% Similarity=0.309 Sum_probs=39.6
Q ss_pred CCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHHHHhcCCC
Q psy7233 95 FDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 95 ~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~L~~lG~~ 154 (383)
.+.+++|+.++-.-.......-.+..++++++|+.+.++.- .+.+.+.++..|+.
T Consensus 494 ~~~vIlD~~~V~~iDsSg~~~L~~l~~~l~~~g~~l~l~~~-----~~~v~~~l~~~gl~ 548 (563)
T TIGR00815 494 LQVVILDMSAVPHLDTSGIHALEELRKELKARGIQLLLANP-----NKAVRSTLKRGGLV 548 (563)
T ss_pred ceEEEEECCCCCcchHHHHHHHHHHHHHHHHcCCEEEEecC-----ChHHHHHHHHCCch
Confidence 48999999998543344455566777888889988877653 35677778777764
No 383
>TIGR03470 HpnH hopanoid biosynthesis associated radical SAM protein HpnH. The sequences represented by this model are members of the radical SAM superfamily of enzymes (pfam04055). These enzymes utilize an iron-sulfur redox cluster and S-adenosylmethionine to carry out diverse radical mediated reactions. The members of this clade are frequently found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. The linkage between SHC and this radical SAM enzyme is strong; one is nearly always observed in the same genome where the other is found. A hopanoid biosynthesis locus was described in Zymomonas mobilis consisting of the genes HpnA-E and SHC (HpnF). Continuing past SHC are found a phosphorylase enzyme (ZMO0873, i.e. HpnG, TIGR03468) and this radical SAM enzyme (ZMO0874) which we name here HpnH. Granted, in Z. mobilis, HpnH is in a convergent orientation with respect to HpnA-G, but one gene beyond HpnH
Probab=21.81 E-value=1.8e+02 Score=28.10 Aligned_cols=61 Identities=16% Similarity=0.219 Sum_probs=38.7
Q ss_pred CCCEEEEecCCce--ec----CCccChhHHHHHHHHHHcCceEEEEc----CCCCCCHHHHHHHHHhcCCC
Q psy7233 94 SFDTVLTDCDGVL--WL----ENELISGADQVMNSLKSLGKKIFYVT----NNSTKTREQLIVKLKHLGFN 154 (383)
Q Consensus 94 ~~kaViFDlDGTL--~d----~~~~~p~A~eal~~l~~~Gi~v~ivT----n~~~~~~~~~~~~L~~lG~~ 154 (383)
.+..|.+.+||.= ++ +...+..+.++++.+++.|+++.+.+ +.......++.+.+.++|++
T Consensus 123 ~~~~i~VSLDG~~e~hd~~~~~~g~f~~~l~~I~~l~~~G~~v~v~~tv~~~~n~~ei~~~~~~~~~lGv~ 193 (318)
T TIGR03470 123 PYLTFSVHLDGLREHHDASVCREGVFDRAVEAIREAKARGFRVTTNTTLFNDTDPEEVAEFFDYLTDLGVD 193 (318)
T ss_pred CCcEEEEEEecCchhhchhhcCCCcHHHHHHHHHHHHHCCCcEEEEEEEeCCCCHHHHHHHHHHHHHcCCC
Confidence 4678899999952 22 22456788899999999998875532 22222233445555667764
No 384
>TIGR00213 GmhB_yaeD D,D-heptose 1,7-bisphosphate phosphatase. This family of proteins formerly designated yaeD resembles the histidinol phosphatase domain of the bifunctional protein HisB. The member from E. coli has been characterized as D,D-heptose 1,7-bisphosphate phosphatase, GmhB, involved in inner core LPS assembly (PubMed:11751812).
Probab=21.78 E-value=74 Score=27.64 Aligned_cols=25 Identities=16% Similarity=0.135 Sum_probs=21.2
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCC
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDE 264 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~ 264 (383)
|+++.+++..|+++|+++ ++||...
T Consensus 28 ~pgv~e~L~~Lk~~G~~l~i~TN~~~ 53 (176)
T TIGR00213 28 IDGVIDALRELKKMGYALVLVTNQSG 53 (176)
T ss_pred CCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 688999999999999886 7888654
No 385
>TIGR01681 HAD-SF-IIIC HAD-superfamily phosphatase, subfamily IIIC. No member of this subfamily is characterized with respect to function, however the MDP-1 protein is a characterized phosphatase. All of the characterized enzymes within subfamily III are phosphatases, and all of the active site residues characteristic of HAD-superfamily phosphatases are present in subfamily IIIC.
Probab=21.51 E-value=92 Score=25.62 Aligned_cols=87 Identities=14% Similarity=0.073 Sum_probs=64.3
Q ss_pred CChhhHHHHHHHhhCCCCEE-EEecC-CCCCCCCCCccccCcch-------HHHHHHHhcCCCccccCCCCHHHHHHHHH
Q psy7233 238 ISFPKLMKAACYLTNPNTLF-VATNT-DESFPMGPHVTVPGTGS-------MVAAVKTGAQREPVVIGKPSKLIGSYLIE 308 (383)
Q Consensus 238 ~~~~~l~~~l~~L~~~g~~~-i~tn~-d~~~~~~~~~~~~~~~~-------l~~~~~~~~~~~~~~~gKP~p~~~~~al~ 308 (383)
..|+++.+.++.|+++|+++ ++||. ...... ..+.... +..+|+...+.+ .||+|++|..+++
T Consensus 29 ~~~~gv~e~L~~Lk~~g~~l~i~Sn~~~~~~~~----~~l~~~~~~~~i~~l~~~f~~~~~~~----~~pkp~~~~~a~~ 100 (128)
T TIGR01681 29 VTIKEIRDKLQTLKKNGFLLALASYNDDPHVAY----ELLKIFEDFGIIFPLAEYFDPLTIGY----WLPKSPRLVEIAL 100 (128)
T ss_pred HHHHHHHHHHHHHHHCCeEEEEEeCCCCHHHHH----HHHHhccccccchhhHhhhhhhhhcC----CCcHHHHHHHHHH
Confidence 46899999999999999886 77886 343221 1112122 456666655543 4799999999999
Q ss_pred HcC--CCCCcEEEEecCchhhHHHHHH
Q psy7233 309 KYN--LNPERTLMIGDRGNTDIRLGYN 333 (383)
Q Consensus 309 ~lg--i~p~e~l~IGDs~~~DI~~A~~ 333 (383)
++| +.|++|+||||+ ..|+...+.
T Consensus 101 ~lg~~~~p~~~l~igDs-~~n~~~~~~ 126 (128)
T TIGR01681 101 KLNGVLKPKSILFVDDR-PDNNEEVDY 126 (128)
T ss_pred HhcCCCCcceEEEECCC-HhHHHHHHh
Confidence 999 999999999999 777776553
No 386
>PHA02530 pseT polynucleotide kinase; Provisional
Probab=21.44 E-value=6.8e+02 Score=23.42 Aligned_cols=31 Identities=10% Similarity=0.073 Sum_probs=23.9
Q ss_pred CCCChhhHHHHHHHhhCCCCEE-EEecCCCCC
Q psy7233 236 SHISFPKLMKAACYLTNPNTLF-VATNTDESF 266 (383)
Q Consensus 236 ~~~~~~~l~~~l~~L~~~g~~~-i~tn~d~~~ 266 (383)
....++++.+.+..|+++|.++ ++||.....
T Consensus 185 ~~~~~~~~~~~l~~l~~~g~~i~i~T~r~~~~ 216 (300)
T PHA02530 185 EDKPNPMVVELVKMYKAAGYEIIVVSGRDGVC 216 (300)
T ss_pred cCCCChhHHHHHHHHHhCCCEEEEEeCCChhh
Confidence 3455889999999999999875 778765543
No 387
>PRK14086 dnaA chromosomal replication initiation protein; Provisional
Probab=21.16 E-value=1.8e+02 Score=31.09 Aligned_cols=101 Identities=16% Similarity=0.168 Sum_probs=52.4
Q ss_pred HHHHHHHHHHHhhhhceeecccccccccc-cccccCChhhHHHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcC
Q psy7233 49 LQELQQYFCHKFIALKCIVATSQTTVMKL-INLSELSGDKQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLG 127 (383)
Q Consensus 49 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~G 127 (383)
++.+-.+.|..+-..+.++++...+...+ ..+..-..+.+.+.+.+++.+++|==+.+-.....-...-..++.+...|
T Consensus 331 L~AIa~~a~~~~~g~~V~Yitaeef~~el~~al~~~~~~~f~~~y~~~DLLlIDDIq~l~gke~tqeeLF~l~N~l~e~g 410 (617)
T PRK14086 331 LHAIGHYARRLYPGTRVRYVSSEEFTNEFINSIRDGKGDSFRRRYREMDILLVDDIQFLEDKESTQEEFFHTFNTLHNAN 410 (617)
T ss_pred HHHHHHHHHHhCCCCeEEEeeHHHHHHHHHHHHHhccHHHHHHHhhcCCEEEEehhccccCCHHHHHHHHHHHHHHHhcC
Confidence 34444444433223455666665432111 11111123345555677888888765555432222233345677888889
Q ss_pred ceEEEEcCCCCCCHHHHHHHHH
Q psy7233 128 KKIFYVTNNSTKTREQLIVKLK 149 (383)
Q Consensus 128 i~v~ivTn~~~~~~~~~~~~L~ 149 (383)
..+++.||..+.....+...|.
T Consensus 411 k~IIITSd~~P~eL~~l~~rL~ 432 (617)
T PRK14086 411 KQIVLSSDRPPKQLVTLEDRLR 432 (617)
T ss_pred CCEEEecCCChHhhhhccHHHH
Confidence 9999988855444433444443
No 388
>PRK08116 hypothetical protein; Validated
Probab=21.10 E-value=4.3e+02 Score=24.83 Aligned_cols=58 Identities=17% Similarity=0.023 Sum_probs=35.1
Q ss_pred hHHHhhcCCCEEEEecCCceecCCccChhHHHHHHHHHHcCceEEEEcCCCCCCHHHHHHH
Q psy7233 87 KQKDFLNSFDTVLTDCDGVLWLENELISGADQVMNSLKSLGKKIFYVTNNSTKTREQLIVK 147 (383)
Q Consensus 87 ~~~~~~~~~kaViFDlDGTL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn~~~~~~~~~~~~ 147 (383)
.+.+.+.+.+.+++|==|+.-.+.......-+.|+.....|.++++.|| .++.++...
T Consensus 171 ~~~~~l~~~dlLviDDlg~e~~t~~~~~~l~~iin~r~~~~~~~IiTsN---~~~~eL~~~ 228 (268)
T PRK08116 171 EIIRSLVNADLLILDDLGAERDTEWAREKVYNIIDSRYRKGLPTIVTTN---LSLEELKNQ 228 (268)
T ss_pred HHHHHhcCCCEEEEecccCCCCCHHHHHHHHHHHHHHHHCCCCEEEECC---CCHHHHHHH
Confidence 3444566788999887776433222222233455666677899999999 455555443
No 389
>PRK06769 hypothetical protein; Validated
Probab=20.82 E-value=78 Score=27.55 Aligned_cols=25 Identities=20% Similarity=0.102 Sum_probs=20.7
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCC
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDE 264 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~ 264 (383)
|+++.+.++.|+++|+++ ++||...
T Consensus 30 ~pgv~e~L~~Lk~~G~~l~I~Tn~~~ 55 (173)
T PRK06769 30 FPFTKASLQKLKANHIKIFSFTNQPG 55 (173)
T ss_pred CCCHHHHHHHHHHCCCEEEEEECCch
Confidence 688999999999999875 7888543
No 390
>TIGR01664 DNA-3'-Pase DNA 3'-phosphatase. The central phosphatase domain is a member of the IIIA subfamily (TIGR01662) of the haloacid dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. As is common in this superfamily, the enzyme is magnesium dependent. A difference between this enzyme and other HAD-superfamily phosphatases is in the third conserved catalytic motif which usually contains two conserved aspartate residues believed to be involved in binding the magnesium ion. Here, the second aspartate is usually replaced by an arginine residue which may indicate an interaction with the phosphate backbone of the substrate. Alternatively, there is an additional conserved aspartate downstream of the ususal site which may indicate slightly different fold in this region.
Probab=20.47 E-value=84 Score=27.30 Aligned_cols=26 Identities=15% Similarity=0.194 Sum_probs=21.1
Q ss_pred ChhhHHHHHHHhhCCCCEE-EEecCCC
Q psy7233 239 SFPKLMKAACYLTNPNTLF-VATNTDE 264 (383)
Q Consensus 239 ~~~~l~~~l~~L~~~g~~~-i~tn~d~ 264 (383)
.|+++.++|+.|+++|.++ ++||...
T Consensus 43 ~~pgv~e~L~~Lk~~G~~l~I~TN~~~ 69 (166)
T TIGR01664 43 LYPEIPAKLQELDDEGYKIVIFTNQSG 69 (166)
T ss_pred ecCCHHHHHHHHHHCCCEEEEEeCCcc
Confidence 3788999999999989875 8888543
No 391
>cd06591 GH31_xylosidase_XylS XylS is a glycosyl hydrolase family 31 (GH31) alpha-xylosidase found in prokaryotes, eukaryotes, and archaea, that catalyzes the release of alpha-xylose from the non-reducing terminal side of the alpha-xyloside substrate. XylS has been characterized in Sulfolobus solfataricus where it hydrolyzes isoprimeverose, the p-nitrophenyl-beta derivative of isoprimeverose, and xyloglucan oligosaccharides, and has transxylosidic activity. All GH31 enzymes cleave a terminal carbohydrate moiety from a substrate that varies considerably in size, depending on the enzyme, and may be either a starch or a glycoprotein. The XylS family corresponds to subgroup 3 in the Ernst et al classification of GH31 enzymes.
Probab=20.25 E-value=2.2e+02 Score=27.59 Aligned_cols=41 Identities=12% Similarity=0.242 Sum_probs=30.1
Q ss_pred CCEEEEecC-----C--ceecCCccChhHHHHHHHHHHcCceEEEEcC
Q psy7233 95 FDTVLTDCD-----G--VLWLENELISGADQVMNSLKSLGKKIFYVTN 135 (383)
Q Consensus 95 ~kaViFDlD-----G--TL~d~~~~~p~A~eal~~l~~~Gi~v~ivTn 135 (383)
+++|.+|+| | ...-..+.+|...+.++.|+++|+++++..+
T Consensus 40 ~d~i~lD~~~~~~~~~~~f~~d~~~FPdp~~mi~~L~~~G~kv~~~i~ 87 (319)
T cd06591 40 LDVIVQDWFYWPKQGWGEWKFDPERFPDPKAMVRELHEMNAELMISIW 87 (319)
T ss_pred ccEEEEechhhcCCCceeEEEChhhCCCHHHHHHHHHHCCCEEEEEec
Confidence 578888875 2 3322244678889999999999999877654
No 392
>TIGR01656 Histidinol-ppas histidinol-phosphate phosphatase family domain. This domain is a member of the haloacid-dehalogenase (HAD) superfamily of aspartate-nucleophile hydrolases. This superfamily is distinguished by the presence of three motifs: an N-terminal motif containing the nucleophilic aspartate, a central motif containing an conserved serine or threonine, and a C-terminal motif containing a conserved lysine (or arginine) and conserved aspartates. More specifically, the domian modelled here is a member of subfamily III of the HAD-superfamily by virtue of lacking a "capping" domain in either of the two common positions, between motifs 1 and 2, or between motifs 2 and 3.
Probab=20.23 E-value=86 Score=26.34 Aligned_cols=25 Identities=24% Similarity=0.155 Sum_probs=21.0
Q ss_pred hhhHHHHHHHhhCCCCEE-EEecCCC
Q psy7233 240 FPKLMKAACYLTNPNTLF-VATNTDE 264 (383)
Q Consensus 240 ~~~l~~~l~~L~~~g~~~-i~tn~d~ 264 (383)
|+++.++++.|+++|+++ ++||.+.
T Consensus 29 ~~g~~~~l~~Lk~~g~~~~I~Sn~~~ 54 (147)
T TIGR01656 29 RPGAVPALLTLRAAGYTVVVVTNQSG 54 (147)
T ss_pred cCChHHHHHHHHHCCCEEEEEeCCCc
Confidence 688999999999999886 7888654
Done!